HHsearch alignment for GI: 254781172 and conserved domain: smart00483

>smart00483 POLXc DNA polymerase X family. includes vertebrate polymerase beta and terminal deoxynucleotidyltransferases

Probab=97.19  E-value=0.0024  Score=45.11  Aligned_cols=83  Identities=13%  Similarity=0.200  Sum_probs=48.9

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH--------HHH-CCHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHCC
Q ss_conf             01000134210014568999987522346667--------763-01011116899999988-299899999789776125
Q gi|254781172|r  522 TKIENILGFGDVSVTNLYDSINKRRNISLERF--------IFS-LGIRHVGAEIARSLAKY-YLSYQNFAQEINNIIAHN  591 (731)
Q Consensus       522 ~~l~~l~GfgeKsa~nL~~sIe~sK~~~L~r~--------L~A-LGI~~vG~~~Ak~La~~-f~si~~l~~~~~~~~~~~  591 (731)
T Consensus        48 ~~l~~ipGIG~~ia~kI~Eil~TG~~~~~e~~~~~~~~~~l~el~~I~GvGpk~a~~l~~~Gi~tl~dL~~a~~------  121 (334)
T smart00483       48 KDLKGLPGIGDKIKKKIEEIIETGKSSKVLEILNDEVYKSLKLFTNVFGVGPKTAAKWYRKGIRTLEELKKNKE------  121 (334)
T ss_pred             HHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHH------
T ss_conf             99727999878999999999984994899998728651689998538887789999999849887999998788------


Q ss_pred             CCCHHHHHCCCCCCHHHHHHHHH
Q ss_conf             11778761388867899999999
Q gi|254781172|r  592 NDDWLSLIRVPLVGDIIAQAIVE  614 (731)
Q Consensus       592 ~~~~e~L~~I~GiG~~~A~si~~  614 (731)
T Consensus       122 ----~~l~~~q~~Glk~~ed~~~  140 (334)
T smart00483      122 ----LKLTKQQKAGLKYYEDILK  140 (334)
T ss_pred             ----HHHHHHHHHHHHHHHHHHC
T ss_conf             ----7678898876999999972