HHsearch alignment for GI: 254781172 and conserved domain: smart00532
>smart00532 LIGANc Ligase N family.
Probab=100.00 E-value=0 Score=1127.94 Aligned_cols=439 Identities=45% Similarity=0.784 Sum_probs=421.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
Q ss_conf 99999999999999998433177982087899999999999989772031158999962003643235775045166425
Q gi|254781172|r 17 ARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLARSEDPNGPLNKIGGEMNLSLFKVTHSIPTL 96 (731)
Q Consensus 17 ~~~~i~~L~~~i~~~~~~Yy~~~~p~isD~eYD~L~~~L~~le~~~p~~~~~~~p~spt~~Vg~~~~~~~~kv~H~~pMl 96 (731)
T Consensus 1 ak~~i~~L~~~I~~~n~~YY~~~~p~ISD~eYD~L~~eL~~Le~~~P~l~---~~~SPt~~VG~~~~~~f~kv~H~~pMl 77 (441)
T smart00532 1 AQKEISELRKLLNKHDYRYYVLDAPIISDAEYDRLMRELKELEEKHPELK---TPDSPTQRVGGKPLEGFNKVRHPVPML 77 (441)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 97899999999999999876189987998999999999999998691446---899985455766166886217898675
Q ss_pred CHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEEEECCEEEEEEECCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 70215999999999999998612467776119999415818999998599899888659865566699977531024322
Q gi|254781172|r 97 SLEKIWNIEDLRKFITRIYRFWQKKDDNSIFFTLEPKIDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIPRV 176 (731)
Q Consensus 97 SL~k~~~~~el~~w~~~~~~~~~~~~~~~~~~~vepKiDG~sisl~Y~~G~L~~a~TRGdG~~GeDVT~n~~~i~~iP~~ 176 (731)
T Consensus 78 SL~k~~~~~el~~w~~r~~k~l~----~~~~~~~epKiDGlsisL~Y~~G~L~~a~TRGDG~~GeDVT~nv~~I~~iP~~ 153 (441)
T smart00532 78 SLDNAFDEDELRAFDERIEKALG----SPFAYVVEPKIDGLSVSLLYENGKLVQAATRGDGTVGEDVTQNVKTIRSIPLR 153 (441)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHC----CCCCEEEEECCCCEEEEEEEECCEEEEEEECCCCCHHHHHHHHHHHCCCCCHH
T ss_conf 70334899999999999998624----66435787614752689999799998887247982555455555311578532
Q ss_pred CCCCCCCEEEEEEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHH-HCCCEEEEEEECCCCCC-CCCCC
Q ss_conf 33544550489999998520212345564314854334234567777523455553-01110566410245433-21000
Q gi|254781172|r 177 LSLNIPEIIEVRGEVYISKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNPTDI-TRYLNFFVHGLGKTSEI-FAKGQ 254 (731)
Q Consensus 177 l~~~~~~~ieiRGEv~m~~~~F~~lN~~~~~~g~~~f~NpRN~aaG~lr~~d~~~~-~r~L~f~ay~~~~~~~~-~~~~~ 254 (731)
T Consensus 154 l~~~~p~~leiRGEv~~~~~~F~~lN~~~~~~~~~~faNpRNaaAGslrqld~~~~~~r~L~f~~y~~~~~~~~~~~~t~ 233 (441)
T smart00532 154 LSGDVPERLEVRGEVFMPKEDFLALNEELEEEGEKPFANPRNAAAGSLRQLDPRITAKRKLRAFFYGLGTGEELFLPKTQ 233 (441)
T ss_pred HCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCEEEEEEECCCCCCCCCCCH
T ss_conf 14788863899889998721344788999864887667837898899876793015425516999980246777785689
Q ss_pred HHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCHHCCCCCCCCCCCCCCEEEECCCCCE
Q ss_conf 03689999759966541488740321134556655310011234376377731100011158765686631231145621
Q gi|254781172|r 255 YEMLQKMRCLGFPVNNGVRQANTFHGIVSYYNEMKSIRSTLPYDIDGLVYKVDEFSLQKQLGERARSPRWMISHKFAEKQ 334 (731)
Q Consensus 255 ~e~l~~L~~~GF~v~~~~~~~~~~~~~~~~~~~~~~~r~~l~y~iDGiVikvn~~~~q~~lG~ts~~PrwaiA~Kf~~e~ 334 (731)
T Consensus 234 ~e~l~~L~~~GF~v~~~~~~~~~~~ev~~~~~~~~~~R~~l~y~iDGiVikvn~~~~q~~lG~ts~~PrwAiA~Kf~~e~ 313 (441)
T smart00532 234 SEALKWLKELGFPVSPHTRLCKNADEVIEYYEEWEEKRAELPYEIDGVVVKVDDLALQRELGFTSKAPRWAIAYKFPAEE 313 (441)
T ss_pred HHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCCCCCCCEEEEECCCCCE
T ss_conf 99999999779924876199689999999999999665629988772699985889875428546898834897688665
Q ss_pred EEEEEEEEEEEECCCCEEEEEEEEEEEEECCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHH
Q ss_conf 58998788994035622589999743330264000101489899975023454322246844076899983587025665
Q gi|254781172|r 335 ASTRLLDIDIQIGRTGILTPVARLEPVNIGGALITNATLHNEDYIKGLDASGKVMRGGRDIRVGDRVLVKRAGEVIPKVV 414 (731)
Q Consensus 335 ~~T~v~~I~wqvgRtG~itPva~~ePV~l~G~~V~ratlhN~~~I~~l~~~~~~~~~~~~I~iGd~V~I~RaGdVIP~I~ 414 (731)
T Consensus 314 ~~T~l~~I~~qVGRtG~itPva~lePV~l~G~~Vs~aTLhN~~~i~~~-----------~i~iGd~V~i~raGdVIPkI~ 382 (441)
T smart00532 314 AETKLLDIIVQVGRTGKITPVAELEPVFLAGSTVSRATLHNEDEIEEK-----------DIRIGDTVVVRKAGDVIPKVV 382 (441)
T ss_pred EEEEEEEEEEECCCCEEEEEEEEEEEEEECCEEEEEECCCCHHHHHHC-----------CCCCCCEEEEEECCCCCCCEE
T ss_conf 789999999973786287689999768867869997056898999975-----------999999999997788887431
Q ss_pred HHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 410123578730477704326577501033786544521010035434411446655332130123
Q gi|254781172|r 415 DIIVNERHPDAQPFSFPSFCPICQSRVVRDLNPKTGKLVAAHRCTGGLACSAQQLERLKHFVSRDA 480 (731)
Q Consensus 415 ~Vi~~~r~~~~~~~~~P~~CP~Cgs~l~~~~~~~~~~~~~~~rC~n~~~Cpaq~~~~i~hF~SK~a 480 (731)
T Consensus 383 ~vv~~~r~~~~~~~~~P~~CP~C~s~l~~~~~~------~~~~C~n~-~C~aq~~~~i~hf~Sr~A 441 (441)
T smart00532 383 GVVKEKRPGDEREIEMPTHCPSCGSELVREEGE------VDIRCPNP-LCPAQLIERIIHFASRKA 441 (441)
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC------EEEECCCC-CCHHHHHHHEEEEECCCC
T ss_conf 411023899885655899898997983843898------78988999-898999701148756799