HHsearch results for GI: 254781172 and protein with PDBid: 1z00_A

>1z00_A DNA excision repair protein ERCC-1; helix-hairpin-helix, hydrolase; HET: DNA; NMR {Homo sapiens} SCOP: a.60.2.5

Probab=98.88  E-value=3.1e-09  Score=88.95  Aligned_cols=67  Identities=16%  Similarity=0.208  Sum_probs=62.0

Q ss_pred             HHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHCCH
Q ss_conf             875223466677630-10111168999999882998999997897761251177876138886789999999996697
Q gi|254781172|r  543 NKRRNISLERFIFSL-GIRHVGAEIARSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGDIIAQAIVEFYQNP  619 (731)
Q Consensus       543 e~sK~~~L~r~L~AL-GI~~vG~~~Ak~La~~f~si~~l~~~~~~~~~~~~~~~e~L~~I~GiG~~~A~si~~ff~~~  619 (731)
                      +++++..+++++.+| |||+||+.+|+.|+++|+|++++..+          +.++|.+|+|||++.|++|.+||++|
T Consensus         7 ek~~~~~~~~~~~~L~~I~gIG~~~a~~L~~~Fgsl~~i~~A----------s~eeL~~i~GiG~~~A~~I~~~f~~p   74 (89)
T 1z00_A            7 EKLEQDFVSRVTECLTTVKSVNKTDSQTLLTTFGSLEQLIAA----------SREDLALCPGLGPQKARRLFDVLHEP   74 (89)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSCCHHHHHHHHHHTCBHHHHHHC----------CHHHHHTSTTCCHHHHHHHHHHHHSC
T ss_pred             HHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHH----------HHHHHHCCCCCCHHHHHHHHHHHCCH
T ss_conf             887367499999987589975999999999994888999998----------78777268996999999999998084