HHsearch results for GI: 254781172 and protein with PDBid: 1z56_C
>1z56_C DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA ligase, coiled-coil; HET: DNA; 3.92A {Saccharomyces cerevisiae}
Probab=96.72 E-value=2.9e-05 Score=58.25 Aligned_cols=80 Identities=10% Similarity=-0.021 Sum_probs=59.4
Q ss_pred CCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCCHH----------------HHHHHCCC
Q ss_conf 68821686699972588998789999999829849981116321799778888637----------------98997499
Q gi|254781172|r 643 VSSEIENKKLVFTGTLQKIQRHKAQEYVTQLGAVVSAILSRKTDIIIVGDNPGSKL----------------EKAQQLGV 706 (731)
Q Consensus 643 ~~~~l~gk~vV~TGtl~~~~R~e~~~~ie~~Ggkv~sSVSkkT~~LI~ge~~gSKl----------------~KA~~LgI 706 (731)
....|.|..|++.|.+....++.++..|+..||++....+..+.+++..+...... ..+..-++
T Consensus 157 ~~~~F~~~~~~~~~~~~~~~~~~l~~~i~~~GG~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (264)
T 1z56_C 157 PLFLFSNRIAYVPRRKISTEDDIIEMKIKLFGGKITDQQSLCNLIIIPYTDPILRKDCMNEVHEKIKEQIKASDTIPKIA 236 (264)
T ss_dssp CCC--------------------CHHHHHHHTTSCCCCSSSCSEEECCCSSTTTHHHHSSHHHHTTTTTTTSSSSCCCCC
T ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 62003784799808988038999999999769887425678649997689753114443211123444344443027888
Q ss_pred EEECHHHHHHHHHHHC
Q ss_conf 1737999999998828
Q gi|254781172|r 707 KIMNEEQFLFLLQQYN 722 (731)
Q Consensus 707 ~Ii~e~ef~~ll~~~~ 722 (731)
+|++++.+.+=|.+..
T Consensus 237 ~iV~~~Wi~dci~~~~ 252 (264)
T 1z56_C 237 RVVAPEWVDHSINENC 252 (264)
T ss_dssp EEECTHHHHHHHTTSC
T ss_pred EECCHHHHHHHHHCCC
T ss_conf 8856799999997398