HHsearch results for GI: 254781172 and protein with PDBid: 2coe_A
>2coe_A Deoxynucleotidyltransferase, terminal variant; BRCT domain, DNA polymerase, teminal deoxynucleotidyltransferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.42 E-value=0.00037 Score=49.67 Aligned_cols=81 Identities=14% Similarity=0.125 Sum_probs=66.1
Q ss_pred CCCCCCCCEEEEECC-CCCCCHHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCCHHHHHHH-------CCCEEECHHHH
Q ss_conf 688216866999725-8899878999999982984998111632179977888863798997-------49917379999
Q gi|254781172|r 643 VSSEIENKKLVFTGT-LQKIQRHKAQEYVTQLGAVVSAILSRKTDIIIVGDNPGSKLEKAQQ-------LGVKIMNEEQF 714 (731)
Q Consensus 643 ~~~~l~gk~vV~TGt-l~~~~R~e~~~~ie~~Ggkv~sSVSkkT~~LI~ge~~gSKl~KA~~-------LgI~Ii~e~ef 714 (731)
....|.|..|.|.+. +..-+|..++++++.+||++..++++++++||+.+..+.|...+.+ .+++|++.+.+
T Consensus 17 ~~~~F~~~~iyiv~~~~~~~rr~~l~~li~~~Gg~v~~~~~~~vTHvI~~~~~~~~~~~~~k~~~~~~~~~~~IVs~~Wl 96 (120)
T 2coe_A 17 QDIKFQDLVVFILEKKMGTTRRALLMELARRKGFRVENELSDSVTHIVAENNSGSDVLEWLQAQKVQVSSQPELLDVSWL 96 (120)
T ss_dssp SCCSCTTCEEEEECTTTCHHHHHHHHHHHHHHTCEECSSCCTTCCEEEESSCCHHHHHHHHHHCCCCCSSCCEEEEHHHH
T ss_pred CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEECCHHH
T ss_conf 76104865999957889979999999999985999973236883089982587289999998765410688769740689
Q ss_pred HHHHHHHCC
Q ss_conf 999988286
Q gi|254781172|r 715 LFLLQQYNT 723 (731)
Q Consensus 715 ~~ll~~~~~ 723 (731)
.+=+++..-
T Consensus 97 ~dC~~~gk~ 105 (120)
T 2coe_A 97 IECIGAGKP 105 (120)
T ss_dssp HHHHHTTSC
T ss_pred HHHHHCCCC
T ss_conf 999986798