HHsearch results for GI: 254781172 and protein with PDBid: 2cok_A

>2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.38  E-value=4.8e-13  Score=118.35  Aligned_cols=78  Identities=13%  Similarity=0.289  Sum_probs=70.2

Q ss_pred             CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCEEEEEECC---CCCCHHHHHHHCCCEEECHHHHHHH
Q ss_conf             2468821686699972588998789999999829849981116321799778---8886379899749917379999999
Q gi|254781172|r  641 KNVSSEIENKKLVFTGTLQKIQRHKAQEYVTQLGAVVSAILSRKTDIIIVGD---NPGSKLEKAQQLGVKIMNEEQFLFL  717 (731)
Q Consensus       641 ~~~~~~l~gk~vV~TGtl~~~~R~e~~~~ie~~Ggkv~sSVSkkT~~LI~ge---~~gSKl~KA~~LgI~Ii~e~ef~~l  717 (731)
                      ...+.+|.|++|||||+|+. +|++++++|+++||+++++||++|+|||+++   +.|+|+++|+++||||++|+.|.++
T Consensus         5 ~~~~kpL~g~~i~itG~~~~-~r~el~~~Ie~~Gg~~~~~vsk~t~~lv~~~e~~~~~~K~~kA~~~gI~iV~e~~L~d~   83 (113)
T 2cok_A            5 SSGDKPLSNMKILTLGKLSR-NKDEVKAMIEKLGGKLTGTANKASLCISTKKEVEKMNKKMEEVKEANIRVVSEDFLQDV   83 (113)
T ss_dssp             CCCCCSSSSCEEEECSCCSS-CHHHHHHHHHHTTCEEESCSTTCSEEECCHHHHHHCCHHHHHHHHTTCCEECTHHHHHH
T ss_pred             CCCCCCCCCCEEEEECCCCC-CHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCCCCCHHHHHHHHCCCEEEEHHHHHHH
T ss_conf             88888879938999826888-99999999998499891333576689984441136667999999879929619999999


Q ss_pred             HH
Q ss_conf             98
Q gi|254781172|r  718 LQ  719 (731)
Q Consensus       718 l~  719 (731)
                      +.
T Consensus        84 ~~   85 (113)
T 2cok_A           84 SA   85 (113)
T ss_dssp             HS
T ss_pred             HH
T ss_conf             97