HHsearch results for GI: 254781172 and protein with PDBid: 2nrt_A
>2nrt_A Uvrabc system protein C; UVRC, endonuclease, RNAse H, helix hairpin helix, NER, hydrolase; 1.50A {Thermotoga maritima} PDB: 2nrv_A 2nrw_A 2nrx_A 2nrz_A
Probab=97.13 E-value=0.00043 Score=49.16 Aligned_cols=50 Identities=16% Similarity=0.174 Sum_probs=44.1
Q ss_pred CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHC
Q ss_conf 0101111689999998829989999978977612511778761388867899999999966
Q gi|254781172|r 557 LGIRHVGAEIARSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGDIIAQAIVEFYQ 617 (731)
Q Consensus 557 LGI~~vG~~~Ak~La~~f~si~~l~~~~~~~~~~~~~~~e~L~~I~GiG~~~A~si~~ff~ 617 (731)
..|||||+++.+.|.++|+|++++.. ++.++|.+++|++ ++|+.|.+||.
T Consensus 171 d~I~GIG~k~~~~Ll~~Fgs~~~I~~----------As~eeL~~v~g~~-k~A~~I~~~l~ 220 (220)
T 2nrt_A 171 DNVPGIGPIRKKKLIEHFGSLENIRS----------ASLEEIARVIGST-EIARRVLDILG 220 (220)
T ss_dssp TTSTTCCHHHHHHHHHHHCSHHHHHT----------SCHHHHHHHHTCH-HHHHHHHHHC-
T ss_pred HHCCCCCHHHHHHHHHHCCCHHHHHH----------CCHHHHHHCCCCH-HHHHHHHHHHC
T ss_conf 00379699999999998189999971----------8999998686959-99999999719