HHsearch results for GI: 254781172 and protein with PDBid: 2nrt_A

>2nrt_A Uvrabc system protein C; UVRC, endonuclease, RNAse H, helix hairpin helix, NER, hydrolase; 1.50A {Thermotoga maritima} PDB: 2nrv_A 2nrw_A 2nrx_A 2nrz_A
Probab=97.13  E-value=0.00043  Score=49.16  Aligned_cols=50  Identities=16%  Similarity=0.174  Sum_probs=44.1

Q ss_pred             CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHC
Q ss_conf             0101111689999998829989999978977612511778761388867899999999966
Q gi|254781172|r  557 LGIRHVGAEIARSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGDIIAQAIVEFYQ  617 (731)
Q Consensus       557 LGI~~vG~~~Ak~La~~f~si~~l~~~~~~~~~~~~~~~e~L~~I~GiG~~~A~si~~ff~  617 (731)
                      ..|||||+++.+.|.++|+|++++..          ++.++|.+++|++ ++|+.|.+||.
T Consensus       171 d~I~GIG~k~~~~Ll~~Fgs~~~I~~----------As~eeL~~v~g~~-k~A~~I~~~l~  220 (220)
T 2nrt_A          171 DNVPGIGPIRKKKLIEHFGSLENIRS----------ASLEEIARVIGST-EIARRVLDILG  220 (220)
T ss_dssp             TTSTTCCHHHHHHHHHHHCSHHHHHT----------SCHHHHHHHHTCH-HHHHHHHHHC-
T ss_pred             HHCCCCCHHHHHHHHHHCCCHHHHHH----------CCHHHHHHCCCCH-HHHHHHHHHHC
T ss_conf             00379699999999998189999971----------8999998686959-99999999719