HHsearch results for GI: 254781172 and protein with PDBid: 2zj8_A
>2zj8_A DNA helicase, putative SKI2-type helicase; RECA fold, ATP-binding, hydrolase, nucleotide- binding; 2.00A {Pyrococcus furiosus} PDB: 2zj5_A* 2zj2_A 2zja_A*
Probab=96.22 E-value=0.0053 Score=40.69 Aligned_cols=51 Identities=24% Similarity=0.317 Sum_probs=44.5
Q ss_pred CHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHCC
Q ss_conf 1011116899999988-299899999789776125117787613888678999999999669
Q gi|254781172|r 558 GIRHVGAEIARSLAKY-YLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGDIIAQAIVEFYQN 618 (731)
Q Consensus 558 GI~~vG~~~Ak~La~~-f~si~~l~~~~~~~~~~~~~~~e~L~~I~GiG~~~A~si~~ff~~ 618 (731)
.||+||...|+.|.++ |.++..+.. ++.++|..|+|||+++|+.|.++...
T Consensus 650 ~i~~ig~~~ar~L~~~G~~s~~~i~~----------~~~~~l~~v~g~g~k~a~~i~~~~~~ 701 (720)
T 2zj8_A 650 QLPLVGRRRARALYNSGFRSIEDISQ----------ARPEELLKIEGIGVKTVEAIFKFLGK 701 (720)
T ss_dssp TSTTCCHHHHHHHHTTTCCSHHHHHT----------CCHHHHHTSTTCCHHHHHHHHHHHC-
T ss_pred CCCCCCHHHHHHHHHCCCCCHHHHHC----------CCHHHHHHCCCCCHHHHHHHHHHHCH
T ss_conf 78999999999999879999999974----------99889852769489999999974450