HHsearch results for GI: 254781172 and protein with PDBid: 3huf_A
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosphoserine binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*
Probab=91.35 E-value=0.73 Score=24.18 Aligned_cols=76 Identities=17% Similarity=0.233 Sum_probs=56.2
Q ss_pred CCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEC---------CEEEEEECCCCCCHHHHHHHCCCEEECHHH
Q ss_conf 68821686699972588998789999999829849981116---------321799778888637989974991737999
Q gi|254781172|r 643 VSSEIENKKLVFTGTLQKIQRHKAQEYVTQLGAVVSAILSR---------KTDIIIVGDNPGSKLEKAQQLGVKIMNEEQ 713 (731)
Q Consensus 643 ~~~~l~gk~vV~TGtl~~~~R~e~~~~ie~~Ggkv~sSVSk---------kT~~LI~ge~~gSKl~KA~~LgI~Ii~e~e 713 (731)
-.+.|.|++|++... -..+..+++++|+.+....+. .+++++..+..-+...-+...|+..++-++
T Consensus 222 r~~lf~g~t~~~~~~-----~~~~~~l~~~lg~~v~~~~~~~~~~k~~~~~~~~vv~~~~~~~~~~~~~~~g~~~~t~~~ 296 (325)
T 3huf_A 222 CINSLEGFSCAMLNT-----SSESHHLLELLGLRISTFMSLGDIDKELISKTDFVVLNNAVYDSEKISFPEGIFCLTIEQ 296 (325)
T ss_dssp HTTTTTTCEEEEETC-----CHHHHHHHHHTTCEEEEEC------CCSSSSCSEEEEC-------------CCCEEEHHH
T ss_pred HHHHHCCCEEEEECC-----HHHHHHHHHHHCCCEECCCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCCEEECHHH
T ss_conf 888736956999466-----788899999716432123324367786445787699996327178776441567614999
Q ss_pred HHHHHHHHCC
Q ss_conf 9999988286
Q gi|254781172|r 714 FLFLLQQYNT 723 (731)
Q Consensus 714 f~~ll~~~~~ 723 (731)
|.+.|-+-+.
T Consensus 297 ~~~~il~~~~ 306 (325)
T 3huf_A 297 LWKIIIERNS 306 (325)
T ss_dssp HHHHHHSSSS
T ss_pred HHHHHHHHHH
T ss_conf 9999997308