PSIBLAST alignment of GI: 254781172 and protein with PDB id: 1dgs
>gi|11513386|pdb|1DGS|A Chain A, Crystal Structure Of Nad+-Dependent Dna Ligase From T. Filiformis Length = 667
>gi|11513387|pdb|1DGS|B Chain B, Crystal Structure Of Nad+-Dependent Dna Ligase From T. Filiformis Length = 667
Score = 464 bits (1193), Expect = e-128, Method: Composition-based stats.
Identities = 234/720 (32%), Positives = 376/720 (52%), Gaps = 59/720 (8%)
Query: 12 LSIEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLARSEDP 71
++ E+AR+ ++ L I YH+ YY + P I D+EYD L R + FP+ P
Sbjct: 1 MTREEARRRINELRDLIRYHNYRYYVLADPEISDAEYDRLLRELKELEERFPEFK---SP 57
Query: 72 NGPLNKIGGEMNL-SLFKVTHSIPTLSLEKIWNIEDLRKFITRIYRFWQKKDDNSIFFTL 130
+ P ++G + V H SL+ + E++ F +++ + +T+
Sbjct: 58 DSPTEQVGARPLEPTFRPVRHPTRMYSLDNAFTYEEVLAF----EERLEREAEAPSLYTV 113
Query: 131 EPKIDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIPRVLSLNIPEIIEVRGE 190
E K+DG + + YE+G + + GDG GE+V+ + IPTIPR L P+ +EVRGE
Sbjct: 114 EHKVDGLSV-LYYEEGVWSTGS--GDGEVGEEVTQNLLTIPTIPRRLKGV-PDRLEVRGE 169
Query: 191 VYISKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNPTDITRY---LNFFVHGLGKTS 247
VY+ FL LN+E+ G K + NPRNAA+G LR+ +P + F+ GLG
Sbjct: 170 VYMPIEAFLRLNEELEERGEKVFKNPRNAAAGSLRQKDPRVTAKRGLRATFYALGLGLGL 229
Query: 248 EIF-AKGQYEMLQKMRCLGFPVNNGVRQANTFHGIVSYYNEMKSIRSTLPYDIDGLVYKV 306
E K QYE+L ++ GFPV + +A G+ Y + R LP++ DG+V K+
Sbjct: 230 EESGLKSQYELLLWLKEKGFPVEHCYEKALGAEGVEEVYRRGLAQRHALPFEADGVVLKL 289
Query: 307 DEFSLQKQLGERARSPRWMISHKFAEKQASTRLLDIDIQIGRTGILTPVARLEPVNIGGA 366
D+ +L +LG AR+PR+ +++KF ++ TRLLD+ Q+GRTG +TPV LEPV I G+
Sbjct: 290 DDLTLWGELGYTARAPRFALAYKFPAEEKETRLLDVVFQVGRTGRVTPVGVLEPVFIEGS 349
Query: 367 LITNATLHNEDYIKGLDASGKVMRGGRDIRVGDRVLVKRAGEVIPKVVDIIVNERHPDAQ 426
++ TLHNE YI+ L DIR+GD VLV +AG VIP+V+ ++ R +
Sbjct: 350 EVSRVTLHNESYIEEL-----------DIRIGDWVLVHKAGGVIPEVLRVLKERRTGKER 398
Query: 427 PFSFPSFCPICQSRVVRDLNPKTGKLVAAHRCTGGLACSAQQLERLKHFVSRDAFNIEGL 486
P +P CP C R+V++ HRC L C A++ E ++H+ SR A +IEGL
Sbjct: 399 PIRWPEACPECGHRLVKE--------GKVHRCPNPL-CPAKRFEAIRHYASRKAMDIEGL 449
Query: 487 GKQQLDFFFKSEDPAFSIRIPADIFTLQRRQQTSTTKIENILGFGDVSVTNLYDSINKRR 546
G++ ++ + +R AD++ L++ + G+ S NL I + +
Sbjct: 450 GEKLIERLLEK----GLVRDVADLYHLRKEDLLG------LERMGEKSAQNLLRQIEESK 499
Query: 547 NISLERFIFSLGIRHVGAEIARSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGD 606
+ LER +++LG+ VG +AR+LA+ + + + + +
Sbjct: 500 HRGLERLLYALGLPGVGEVLARNLARRFGTMDRLLEASLEELIEVEEVGE---------- 549
Query: 607 IIAQAIVEFYQNPRNICAVEALLKEVSPSIGRHEKNVSSEIENKKLVFTGTLQKIQRHKA 666
+ A+AI+E ++P V L + + E VS + V TG L + R +
Sbjct: 550 LTARAILETLKDPAFRDLVRRLKEAGVSMESKEE--VSDLLSGLTFVLTGELSR-PREEV 606
Query: 667 QEYVTQLGAVVSAILSRKTDIIIVGDNPGSKLEKAQQLGVKIMNEEQFLFLLQQYNTTLR 726
+ + +LGA V+ +SRKT ++VG+NPGSKLEKA+ LGV ++ EE+F L++ +
Sbjct: 607 KALLGRLGAKVTDSVSRKTSYLVVGENPGSKLEKARALGVAVLTEEEFWRFLKEKGAPVP 666