PSIBLAST alignment of GI: 254781172 and protein with PDB id: 1ta8
>gi|56966057|pdb|1TA8|A Chain A, Structural Rearrangement Accompanying Nad+ Synthesis Within A Bacterial Dna Ligase Crystal Length = 332
Score = 288 bits (736), Expect = 3e-75, Method: Composition-based stats.
Identities = 117/329 (35%), Positives = 183/329 (55%), Gaps = 10/329 (3%)
Query: 12 LSIEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLARSEDP 71
L++ A L ++++ + YY +P + D YD L + I FPDL P
Sbjct: 6 LTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLI---TP 62
Query: 72 NGPLNKIGGEMNLSLFKVTHSIPTLSLEKIWNIEDLRKFITRIYRFWQKKDDNSIFFTLE 131
+ P ++GG++ K H IP SL ++ ED+ F R+ + K + + E
Sbjct: 63 DSPTQRVGGKVLSGFEKAPHDIPMYSLNDGFSKEDIFAFDERVRKAIGK----PVAYCCE 118
Query: 132 PKIDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIPRVLSLNIPEIIEVRGEV 191
KIDG I++RYE G FV A RGDG GE+++ +R + ++P L+ I +EVRGE
Sbjct: 119 LKIDGLAISLRYENGVFVRGATRGDGTVGENITENLRTVRSVPMRLTEPIS--VEVRGEC 176
Query: 192 YISKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNPTD-ITRYLNFFVHGLGKTSEIF 250
Y+ K F+ALN+E G+ +ANPRNAA+G LR+L+ R LN F++ + +
Sbjct: 177 YMPKQSFVALNEEREENGQDIFANPRNAAAGSLRQLDTKIVAKRNLNTFLYTVADFGPMK 236
Query: 251 AKGQYEMLQKMRCLGFPVNNGVRQANTFHGIVSYYNEMKSIRSTLPYDIDGLVYKVDEFS 310
AK Q+E L+++ +GF N + + + +Y E RSTLPY+IDG+V KV+EF+
Sbjct: 237 AKTQFEALEELSAIGFRTNPERQLCQSIDEVWAYIEEYHEKRSTLPYEIDGIVIKVNEFA 296
Query: 311 LQKQLGERARSPRWMISHKFAEKQASTRL 339
LQ +LG ++PRW I++KF ++A T +
Sbjct: 297 LQDELGFTVKAPRWAIAYKFPPEEAETVV 325