PSIBLAST alignment of GI: 254781172 and protein with PDB id: 1ta8

>gi|56966057|pdb|1TA8|A Chain A, Structural Rearrangement Accompanying Nad+ Synthesis Within A Bacterial Dna Ligase Crystal Length = 332
 Score =  288 bits (736), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 117/329 (35%), Positives = 183/329 (55%), Gaps = 10/329 (3%)

Query: 12  LSIEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLARSEDP 71
           L++  A      L ++++ +   YY   +P + D  YD L +    I   FPDL     P
Sbjct: 6   LTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLI---TP 62

Query: 72  NGPLNKIGGEMNLSLFKVTHSIPTLSLEKIWNIEDLRKFITRIYRFWQKKDDNSIFFTLE 131
           + P  ++GG++     K  H IP  SL   ++ ED+  F  R+ +   K     + +  E
Sbjct: 63  DSPTQRVGGKVLSGFEKAPHDIPMYSLNDGFSKEDIFAFDERVRKAIGK----PVAYCCE 118

Query: 132 PKIDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIPRVLSLNIPEIIEVRGEV 191
            KIDG  I++RYE G FV  A RGDG  GE+++  +R + ++P  L+  I   +EVRGE 
Sbjct: 119 LKIDGLAISLRYENGVFVRGATRGDGTVGENITENLRTVRSVPMRLTEPIS--VEVRGEC 176

Query: 192 YISKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNPTD-ITRYLNFFVHGLGKTSEIF 250
           Y+ K  F+ALN+E    G+  +ANPRNAA+G LR+L+      R LN F++ +     + 
Sbjct: 177 YMPKQSFVALNEEREENGQDIFANPRNAAAGSLRQLDTKIVAKRNLNTFLYTVADFGPMK 236

Query: 251 AKGQYEMLQKMRCLGFPVNNGVRQANTFHGIVSYYNEMKSIRSTLPYDIDGLVYKVDEFS 310
           AK Q+E L+++  +GF  N   +   +   + +Y  E    RSTLPY+IDG+V KV+EF+
Sbjct: 237 AKTQFEALEELSAIGFRTNPERQLCQSIDEVWAYIEEYHEKRSTLPYEIDGIVIKVNEFA 296

Query: 311 LQKQLGERARSPRWMISHKFAEKQASTRL 339
           LQ +LG   ++PRW I++KF  ++A T +
Sbjct: 297 LQDELGFTVKAPRWAIAYKFPPEEAETVV 325