RPSBLAST alignment for GI: 254781172 and conserved domain: COG0272
>gnl|CDD|30621 COG0272, Lig, NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]. Length = 667
Score = 682 bits (1762), Expect = 0.0
Identities = 284/711 (39%), Positives = 434/711 (61%), Gaps = 48/711 (6%)
Query: 11 ALSIEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLARSED 70
A S+ +A++E+ L + ++ HD YY P + D+EYD L R + P+L
Sbjct: 1 AWSMAEAQEEIEELRELLNKHDYRYYVLDAPSVSDAEYDQLYRELQELEEKHPELIT--- 57
Query: 71 PNGPLNKIGGEMNLSLFKVTHSIPTLSLEKIWNIEDLRKFITRIYRFWQKKDDNSIFFTL 130
P+ P ++G + KV H +P LSL+ ++ E+LR F RI +F +S+ + +
Sbjct: 58 PDSPTQRVGAAPLNAFKKVRHPVPMLSLDNAFDEEELRAFDRRIRKFL----GDSVEYVV 113
Query: 131 EPKIDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIPRVLSLNIPEIIEVRGE 190
EPKIDG I++ YE GK V AA RGDG +GED++A +R I +IP L P ++EVRGE
Sbjct: 114 EPKIDGLAISLVYENGKLVRAATRGDGTTGEDITANVRTIRSIPLKLP-GAPAVLEVRGE 172
Query: 191 VYISKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNPTDIT-RYLNFFVHGLGKTSEI 249
V++ K DF ALN+E G KP+ANPRNAA+G LR+L+P R L FF++ +G E
Sbjct: 173 VFMPKEDFEALNEEREEEGEKPFANPRNAAAGSLRQLDPKITAKRKLGFFIYAVGDGEEG 232
Query: 250 -FAKGQYEMLQKMRCLGFPVNNGVRQANTFHGIVSYYNEMKSIRSTLPYDIDGLVYKVDE 308
A Q E L ++ GFPVN R ++++Y E + R++LPYDIDG+V KV++
Sbjct: 233 LLADTQSERLAFLKAWGFPVNPYTRLCKNADEVLAFYEEWEKKRASLPYDIDGVVIKVND 292
Query: 309 FSLQKQLGERARSPRWMISHKFAEKQASTRLLDIDIQIGRTGILTPVARLEPVNIGGALI 368
+LQ++LG +++PRW I++KF ++A T+LLDI++Q+GRTG +TPVARLEPV + G +
Sbjct: 293 LALQRELGFTSKAPRWAIAYKFPAEEAVTKLLDIEVQVGRTGAITPVARLEPVELAGVTV 352
Query: 369 TNATLHNEDYIKGLDASGKVMRGGRDIRVGDRVLVKRAGEVIPKVVDIIVNERHPDAQPF 428
+ ATLHN D IK DIR+GD V+V++AG+VIP+VV +++ +R + +P
Sbjct: 353 SRATLHNVDEIKRK-----------DIRIGDTVVVRKAGDVIPQVVGVVLEKRPGNEKPI 401
Query: 429 SFPSFCPICQSRVVRDLNPKTGKLVAAHRCTGGLACSAQQLERLKHFVSRDAFNIEGLGK 488
FP+ CP+C S +VR + RCT GL C AQ ERL HFVSR+A +I+GLG+
Sbjct: 402 PFPTHCPVCGSELVR------EEGEVVIRCTNGLNCPAQLKERLIHFVSRNALDIDGLGE 455
Query: 489 QQLDFFFKSEDPAFSIRIPADIFTLQRRQQTSTTKIENILGFGDVSVTNLYDSINKRRNI 548
+ ++ F+ I+ AD++TL + ++ GFG+ S NL ++I K +
Sbjct: 456 KIIEQLFEKG----LIKDIADLYTLTEED------LLSLEGFGEKSAENLLNAIEKSKKQ 505
Query: 549 SLERFIFSLGIRHVGAEIARSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGDII 608
L RF+++LGIRHVG A+SLA+++ + + ++A + ++ S +P +G+++
Sbjct: 506 PLARFLYALGIRHVGETTAKSLARHFGTLE-------ALLAASEEELAS---IPGIGEVV 555
Query: 609 AQAIVEFYQNPRNICAVEALLKE-VSPSIGRHEKNVSSEIENKKLVFTGTLQKIQRHKAQ 667
A++I+EF+ N N ++ LL V +S + K V TGTL+ + R +A+
Sbjct: 556 ARSIIEFFANEENRELIDELLAAGVKWEEEEKISIETSPLAGKTFVLTGTLEGMSRDEAK 615
Query: 668 EYVTQLGAVVSAILSRKTDIIIVGDNPGSKLEKAQQLGVKIMNEEQFLFLL 718
+ LGA VS +S+KTD ++ G+N GSKL KAQ+LGVKI++EE+FL LL
Sbjct: 616 ALLEALGAKVSGSVSKKTDYVVAGENAGSKLAKAQELGVKIIDEEEFLALL 666