RPSBLAST alignment of GI: 254781172 and protein with PDBid: 1dgs

>1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A* Length = 667
 Score =  693 bits (1789), Expect = 0.0
 Identities = 243/715 (33%), Positives = 385/715 (53%), Gaps = 61/715 (8%)

Query: 12  LSIEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLARSEDP 71
           ++ E+AR+ ++ L   I YH+  YY  + P I D+EYD L R    +   FP+      P
Sbjct: 1   MTREEARRRINELRDLIRYHNYRYYVLADPEISDAEYDRLLRELKELEERFPEFKS---P 57

Query: 72  NGPLNKIGGEMNLSLF-KVTHSIPTLSLEKIWNIEDLRKFITRIYRFWQKKDDNSIFFTL 130
           + P  ++G       F  V H     SL+  +  E++  F  R+    +++ +    +T+
Sbjct: 58  DSPTEQVGARPLEPTFRPVRHPTRMYSLDNAFTYEEVLAFEERL----EREAEAPSLYTV 113

Query: 131 EPKIDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIPRVLSLNIPEIIEVRGE 190
           E K+DG  + + YE+G  V++   GDG  GE+V+  +  IPTIPR L   +P+ +EVRGE
Sbjct: 114 EHKVDGLSV-LYYEEG--VWSTGSGDGEVGEEVTQNLLTIPTIPRRLK-GVPDRLEVRGE 169

Query: 191 VYISKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNPTD-ITRYLNFFVHGLGKT--- 246
           VY+    FL LN+E+   G K + NPRNAA+G LR+ +P     R L    + LG     
Sbjct: 170 VYMPIEAFLRLNEELEERGEKVFKNPRNAAAGSLRQKDPRVTAKRGLRATFYALGLGLGL 229

Query: 247 SEIFAKGQYEMLQKMRCLGFPVNNGVRQANTFHGIVSYYNEMKSIRSTLPYDIDGLVYKV 306
            E   K QYE+L  ++  GFPV +   +A    G+   Y    + R  LP++ DG+V K+
Sbjct: 230 EESGLKSQYELLLWLKEKGFPVEHCYEKALGAEGVEEVYRRGLAQRHALPFEADGVVLKL 289

Query: 307 DEFSLQKQLGERARSPRWMISHKFAEKQASTRLLDIDIQIGRTGILTPVARLEPVNIGGA 366
           D+ +L  +LG  AR+PR+ +++KF  ++  TRLLD+  Q+GRTG +TPV  LEPV I G+
Sbjct: 290 DDLTLWGELGYTARAPRFALAYKFPAEEKETRLLDVVFQVGRTGRVTPVGVLEPVFIEGS 349

Query: 367 LITNATLHNEDYIKGLDASGKVMRGGRDIRVGDRVLVKRAGEVIPKVVDIIVNERHPDAQ 426
            ++  TLHNE YI+ L           DIR+GD VLV +AG VIP+V+ ++   R    +
Sbjct: 350 EVSRVTLHNESYIEEL-----------DIRIGDWVLVHKAGGVIPEVLRVLKERRTGKER 398

Query: 427 PFSFPSFCPICQSRVVRDLNPKTGKLVAAHRCTGGLACSAQQLERLKHFVSRDAFNIEGL 486
           P  +P  CP C  R+V++           HRC   L C A++ E ++H+ SR A +IEGL
Sbjct: 399 PIRWPEACPECGHRLVKE--------GKVHRCPNPL-CPAKRFEAIRHYASRKAMDIEGL 449

Query: 487 GKQQLDFFFKSEDPAFSIRIPADIFTLQRRQQTSTTKIENILGFGDVSVTNLYDSINKRR 546
           G++ ++   +       +R  AD++ L++        +  +   G+ S  NL   I + +
Sbjct: 450 GEKLIERLLEKG----LVRDVADLYHLRKED------LLGLERMGEKSAQNLLRQIEESK 499

Query: 547 NISLERFIFSLGIRHVGAEIARSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGD 606
           +  LER +++LG+  VG  +AR+LA+ + +     +               LI V  VG+
Sbjct: 500 HRGLERLLYALGLPGVGEVLARNLARRFGTMDRLLEA----------SLEELIEVEEVGE 549

Query: 607 IIAQAIVEFYQNPRNICAVEALLKE-VSPSIGRHEKNVSSEIENKKLVFTGTLQKIQRHK 665
           + A+AI+E  ++P     V  L +  VS      ++ VS  +     V TG L +  R +
Sbjct: 550 LTARAILETLKDPAFRDLVRRLKEAGVSMES---KEEVSDLLSGLTFVLTGELSR-PREE 605

Query: 666 AQEYVTQLGAVVSAILSRKTDIIIVGDNPGSKLEKAQQLGVKIMNEEQFLFLLQQ 720
            +  + +LGA V+  +SRKT  ++VG+NPGSKLEKA+ LGV ++ EE+F   L++
Sbjct: 606 VKALLGRLGAKVTDSVSRKTSYLVVGENPGSKLEKARALGVAVLTEEEFWRFLKE 660