RPSBLAST alignment of GI: 254781172 and protein with PDBid: 1dgs
>1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A* Length = 667
Score = 693 bits (1789), Expect = 0.0
Identities = 243/715 (33%), Positives = 385/715 (53%), Gaps = 61/715 (8%)
Query: 12 LSIEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLARSEDP 71
++ E+AR+ ++ L I YH+ YY + P I D+EYD L R + FP+ P
Sbjct: 1 MTREEARRRINELRDLIRYHNYRYYVLADPEISDAEYDRLLRELKELEERFPEFKS---P 57
Query: 72 NGPLNKIGGEMNLSLF-KVTHSIPTLSLEKIWNIEDLRKFITRIYRFWQKKDDNSIFFTL 130
+ P ++G F V H SL+ + E++ F R+ +++ + +T+
Sbjct: 58 DSPTEQVGARPLEPTFRPVRHPTRMYSLDNAFTYEEVLAFEERL----EREAEAPSLYTV 113
Query: 131 EPKIDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIPRVLSLNIPEIIEVRGE 190
E K+DG + + YE+G V++ GDG GE+V+ + IPTIPR L +P+ +EVRGE
Sbjct: 114 EHKVDGLSV-LYYEEG--VWSTGSGDGEVGEEVTQNLLTIPTIPRRLK-GVPDRLEVRGE 169
Query: 191 VYISKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNPTD-ITRYLNFFVHGLGKT--- 246
VY+ FL LN+E+ G K + NPRNAA+G LR+ +P R L + LG
Sbjct: 170 VYMPIEAFLRLNEELEERGEKVFKNPRNAAAGSLRQKDPRVTAKRGLRATFYALGLGLGL 229
Query: 247 SEIFAKGQYEMLQKMRCLGFPVNNGVRQANTFHGIVSYYNEMKSIRSTLPYDIDGLVYKV 306
E K QYE+L ++ GFPV + +A G+ Y + R LP++ DG+V K+
Sbjct: 230 EESGLKSQYELLLWLKEKGFPVEHCYEKALGAEGVEEVYRRGLAQRHALPFEADGVVLKL 289
Query: 307 DEFSLQKQLGERARSPRWMISHKFAEKQASTRLLDIDIQIGRTGILTPVARLEPVNIGGA 366
D+ +L +LG AR+PR+ +++KF ++ TRLLD+ Q+GRTG +TPV LEPV I G+
Sbjct: 290 DDLTLWGELGYTARAPRFALAYKFPAEEKETRLLDVVFQVGRTGRVTPVGVLEPVFIEGS 349
Query: 367 LITNATLHNEDYIKGLDASGKVMRGGRDIRVGDRVLVKRAGEVIPKVVDIIVNERHPDAQ 426
++ TLHNE YI+ L DIR+GD VLV +AG VIP+V+ ++ R +
Sbjct: 350 EVSRVTLHNESYIEEL-----------DIRIGDWVLVHKAGGVIPEVLRVLKERRTGKER 398
Query: 427 PFSFPSFCPICQSRVVRDLNPKTGKLVAAHRCTGGLACSAQQLERLKHFVSRDAFNIEGL 486
P +P CP C R+V++ HRC L C A++ E ++H+ SR A +IEGL
Sbjct: 399 PIRWPEACPECGHRLVKE--------GKVHRCPNPL-CPAKRFEAIRHYASRKAMDIEGL 449
Query: 487 GKQQLDFFFKSEDPAFSIRIPADIFTLQRRQQTSTTKIENILGFGDVSVTNLYDSINKRR 546
G++ ++ + +R AD++ L++ + + G+ S NL I + +
Sbjct: 450 GEKLIERLLEKG----LVRDVADLYHLRKED------LLGLERMGEKSAQNLLRQIEESK 499
Query: 547 NISLERFIFSLGIRHVGAEIARSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGD 606
+ LER +++LG+ VG +AR+LA+ + + + LI V VG+
Sbjct: 500 HRGLERLLYALGLPGVGEVLARNLARRFGTMDRLLEA----------SLEELIEVEEVGE 549
Query: 607 IIAQAIVEFYQNPRNICAVEALLKE-VSPSIGRHEKNVSSEIENKKLVFTGTLQKIQRHK 665
+ A+AI+E ++P V L + VS ++ VS + V TG L + R +
Sbjct: 550 LTARAILETLKDPAFRDLVRRLKEAGVSMES---KEEVSDLLSGLTFVLTGELSR-PREE 605
Query: 666 AQEYVTQLGAVVSAILSRKTDIIIVGDNPGSKLEKAQQLGVKIMNEEQFLFLLQQ 720
+ + +LGA V+ +SRKT ++VG+NPGSKLEKA+ LGV ++ EE+F L++
Sbjct: 606 VKALLGRLGAKVTDSVSRKTSYLVVGENPGSKLEKARALGVAVLTEEEFWRFLKE 660