HHsearch alignment for GI: 254781174 and conserved domain: COG1729
>COG1729 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=99.84 E-value=4.8e-20 Score=135.00 Aligned_cols=115 Identities=22% Similarity=0.339 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 54434445555443111234589999999999985200101345655555556666666555666665443223456899
Q gi|254781174|r 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 (271)
Q Consensus 134 ~y~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l~~~~~~La~~e~~ia~~Y~~~~~y~aA~~~~ 213 (271)
T Consensus 144 ~Y~~A~~~~ks--------gdy~~A~~~F~~fi~~YP~s~~~~nA~yWL--------------Ge~~y~qg~y~~Aa~~f 201 (262)
T COG1729 144 LYNAALDLYKS--------GDYAEAEQAFQAFIKKYPNSTYTPNAYYWL--------------GESLYAQGDYEDAAYIF 201 (262)
T ss_pred HHHHHHHHHHC--------CCHHHHHHHHHHHHHCCCCCCCCCHHHHHH--------------HHHHHHCCCCHHHHHHH
T ss_conf 99999999983--------878899999999997099975560249998--------------89998624616799999
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 988652899811599999999999974987999999999978569997899999860
Q gi|254781174|r 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 (271)
Q Consensus 214 ~~~i~~yp~t~~~~eAl~~l~~~y~~lg~~d~A~~~~~~l~~~yP~s~~~~~a~~~l 270 (271)
T Consensus 202 ~~~~k~~P~s~KApdallKlg~~~~~l~~~d~A~atl~qv~k~YP~t~aA~~Ak~~~ 258 (262)
T COG1729 202 ARVVKDYPKSPKAPDALLKLGVSLGRLGNTDEACATLQQVIKRYPGTDAAKLAKVAL 258 (262)
T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 999983899998828999999999982177999999999998789977999999987