HHsearch alignment for GI: 254781174 and conserved domain: COG4235
>COG4235 Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones].
Probab=97.20 E-value=0.012 Score=33.43 Aligned_cols=127 Identities=15% Similarity=0.084 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 67999998875401121101355544344455554431112345899999999999852001013456555555566666
Q gi|254781174|r 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 (271)
Q Consensus 111 ~~A~~~~~~fi~~~P~s~~~~~A~y~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l~~~~~~La 190 (271)
T Consensus 139 ~~l~a~Le~~L~~nP~d~e---gW~~Lg~~ym~--------~~~~~~A~~AY~~A~rL~g~n~~~~~------------- 194 (287)
T COG4235 139 EALIARLETHLQQNPGDAE---GWDLLGRAYMA--------LGRASDALLAYRNALRLAGDNPEILL------------- 194 (287)
T ss_pred HHHHHHHHHHHHHCCCCCH---HHHHHHHHHHH--------HCCHHHHHHHHHHHHHHCCCCHHHHH-------------
T ss_conf 9999999999984988724---49999999998--------44434799999999873799889999-------------
Q ss_pred HHHHHHHH--HHHH-HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHHCCCCHHHHHH
Q ss_conf 66555666--6654-432234568999886528998115999999999999749879999999999-7856999789999
Q gi|254781174|r 191 AKEVEIGR--YYLK-RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI-QERYPQGYWARYV 266 (271)
Q Consensus 191 ~~e~~ia~--~Y~~-~~~y~aA~~~~~~~i~~yp~t~~~~eAl~~l~~~y~~lg~~d~A~~~~~~l-~~~yP~s~~~~~a 266 (271)
T Consensus 195 ----g~aeaL~~~a~~~~ta~a~~ll~~al~~D~~~---iral~lLA~~afe~g~~~~A~~~Wq~lL~~lp~~~~rr~~i 267 (287)
T COG4235 195 ----GLAEALYYQAGQQMTAKARALLRQALALDPAN---IRALSLLAFAAFEQGDYAEAAAAWQMLLDLLPADDPRRSLI 267 (287)
T ss_pred ----HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf ----99999999538844499999999998439732---88999999999981459999999999985189998237899
Q ss_pred HH
Q ss_conf 98
Q gi|254781174|r 267 ET 268 (271)
Q Consensus 267 ~~ 268 (271)
T Consensus 268 e~ 269 (287)
T COG4235 268 ER 269 (287)
T ss_pred HH
T ss_conf 99