HHsearch alignment for GI: 254781174 and conserved domain: COG4235

>COG4235 Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones].
Probab=97.20  E-value=0.012  Score=33.43  Aligned_cols=127  Identities=15%  Similarity=0.084  Sum_probs=85.6

Q ss_pred             HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf             67999998875401121101355544344455554431112345899999999999852001013456555555566666
Q gi|254781174|r  111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA  190 (271)
Q Consensus       111 ~~A~~~~~~fi~~~P~s~~~~~A~y~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l~~~~~~La  190 (271)
T Consensus       139 ~~l~a~Le~~L~~nP~d~e---gW~~Lg~~ym~--------~~~~~~A~~AY~~A~rL~g~n~~~~~-------------  194 (287)
T COG4235         139 EALIARLETHLQQNPGDAE---GWDLLGRAYMA--------LGRASDALLAYRNALRLAGDNPEILL-------------  194 (287)
T ss_pred             HHHHHHHHHHHHHCCCCCH---HHHHHHHHHHH--------HCCHHHHHHHHHHHHHHCCCCHHHHH-------------
T ss_conf             9999999999984988724---49999999998--------44434799999999873799889999-------------


Q ss_pred             HHHHHHHH--HHHH-HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHHCCCCHHHHHH
Q ss_conf             66555666--6654-432234568999886528998115999999999999749879999999999-7856999789999
Q gi|254781174|r  191 AKEVEIGR--YYLK-RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI-QERYPQGYWARYV  266 (271)
Q Consensus       191 ~~e~~ia~--~Y~~-~~~y~aA~~~~~~~i~~yp~t~~~~eAl~~l~~~y~~lg~~d~A~~~~~~l-~~~yP~s~~~~~a  266 (271)
T Consensus       195 ----g~aeaL~~~a~~~~ta~a~~ll~~al~~D~~~---iral~lLA~~afe~g~~~~A~~~Wq~lL~~lp~~~~rr~~i  267 (287)
T COG4235         195 ----GLAEALYYQAGQQMTAKARALLRQALALDPAN---IRALSLLAFAAFEQGDYAEAAAAWQMLLDLLPADDPRRSLI  267 (287)
T ss_pred             ----HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf             ----99999999538844499999999998439732---88999999999981459999999999985189998237899


Q ss_pred             HH
Q ss_conf             98
Q gi|254781174|r  267 ET  268 (271)
Q Consensus       267 ~~  268 (271)
T Consensus       268 e~  269 (287)
T COG4235         268 ER  269 (287)
T ss_pred             HH
T ss_conf             99