HHsearch alignment for GI: 254781174 and conserved domain: PRK10049

>PRK10049 pgaA outer membrane protein PgaA; Provisional.
Probab=98.68  E-value=1.5e-05  Score=50.36  Aligned_cols=75  Identities=13%  Similarity=0.216  Sum_probs=53.1

Q ss_pred             CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC-------------------------------CCHHHHHHHHHHHH
Q ss_conf             68999999999998098999999999998530477-------------------------------30268998778877
Q gi|254781174|r   56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-------------------------------GVARKSLLMSAFVQ  104 (271)
Q Consensus        56 ~~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s-------------------------------~~a~~A~~~la~~~  104 (271)
T Consensus        30 ~~d~~yd~~Ii~AR~G~~~~al~~L~~~~~~~~~~~~~v~D~l~i~sWag~d~~v~~~~~~~~~~~~lp~~~l~~~Aka~  109 (818)
T PRK10049         30 AADTAYDALIIEARAGDTAPALSWLQQKSKAGALSNGQVADWLQIALWAGQDQEVITVYERYQSHMQLPARGLAAAARAY  109 (818)
T ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf             32568999999986488236899999875338766788988999985347777999999961888889979999999998


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf             65455567999998875401121101
Q gi|254781174|r  105 YSAGKYQQAASLGEEYITQYPESKNV  130 (271)
Q Consensus       105 y~~~~y~~A~~~~~~fi~~~P~s~~~  130 (271)
T Consensus       110 Rn~kq~~~Al~ly~~~~~~~P~n~d~  135 (818)
T PRK10049        110 RNLKQWQNSLTLWQKALSLEPQNKDY  135 (818)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCH
T ss_conf             63554677999999985029999407