HHsearch alignment for GI: 254781174 and conserved domain: PRK10049
>PRK10049 pgaA outer membrane protein PgaA; Provisional.
Probab=98.54 E-value=5.2e-05 Score=47.29 Aligned_cols=73 Identities=12% Similarity=0.129 Sum_probs=53.2
Q ss_pred CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
Q ss_conf 7368999999999998098999999999998530477302689987788776545556799999887540112110
Q gi|254781174|r 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 (271)
Q Consensus 54 ~~~~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~ 129 (271)
T Consensus 96 ~lp~~~l~~~Aka~Rn~kq~~~Al~ly~~~~~~~P~n~---d~~lGlalt~Ada~~~~~Al~~~~~~~~~~p~~~~ 168 (818)
T PRK10049 96 QLPARGLAAAARAYRNLKQWQNSLTLWQKALSLEPQNK---DYQSGQILTLADAGHYDEALVKAKQLVAGAPDVAN 168 (818)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---CHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHH
T ss_conf 89979999999998635546779999999850299994---07899999998638869999999998762897678