HHsearch alignment for GI: 254781174 and conserved domain: PRK11189

Probab=98.67  E-value=3.6e-06  Score=54.03  Aligned_cols=172  Identities=20%  Similarity=0.200  Sum_probs=110.2

Q ss_pred             CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf             68999999999998098999999999998530477302689987788776545556799999887540112110135554
Q gi|254781174|r   56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY  135 (271)
Q Consensus        56 ~~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y  135 (271)
T Consensus        98 ~adayN~LGiy~tq~~~fD~AyEAFDs~LEL~P~y~YA---~lNRGIAlYYg~R~~LA~~D~~~fy~~dp~DpYR~LWLY  174 (297)
T PRK11189         98 MADAYNYLGIYLTQEGEFDAAYEAFDSVLELDPTYDYA---YLNRGIALYYGGRYDLAQDDLLAFYQDDPNDPYRALWLY  174 (297)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH---HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf             58999999999999711999999987777269873489---983027887446378899999999960999827999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHCCHHHHHHHHHH-------HHHHHHHHHHHHH
Q ss_conf             4344455554431112345899999999-------------9998520010134565555-------5556666666555
Q gi|254781174|r  136 LVGMSYAQMIRDVPYDQRATKLMLQYMS-------------RIVERYTNSPYVKGARFYV-------TVGRNQLAAKEVE  195 (271)
Q Consensus       136 ~~a~~~~~~~~~~~~d~~~~~~A~~~f~-------------~~i~~yP~S~ya~~A~~~l-------~~~~~~La~~e~~  195 (271)
T Consensus       175 l~e~---------~~d~~---~A~~~L~~r~~~~~~~~W~~~iV~~ylg~ise~~~~~~~~~~~~~n~~lAErLcEaYFY  242 (297)
T PRK11189        175 LIEQ---------KLDPK---QAKENLKQRYEKLDKEQWGWNIVDFYLGKISEEQLFERLKAGATDNTELAERLCETYFY  242 (297)
T ss_pred             HHHC---------CCCHH---HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             9981---------16999---99999999998357122689999999458999999999987273709999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHCCC
Q ss_conf             66666544322345689998865289-981159999999999997498
Q gi|254781174|r  196 IGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEAMARLVEAYVALAL  242 (271)
Q Consensus       196 ia~~Y~~~~~y~aA~~~~~~~i~~yp-~t~~~~eAl~~l~~~y~~lg~  242 (271)
T Consensus       243 LaK~~~~~G~~~~A~~~fKLAla~NVyeFVEhRYA~lEL~~l~~~~~~  290 (297)
T PRK11189        243 LAKYYLSLGDLDEAANLFKLALANNVYNFVEHRYALLELALLGQDLDD  290 (297)
T ss_pred             HHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999879989999999998704825888999999999999999999