HHsearch alignment for GI: 254781174 and conserved domain: TIGR02795

>TIGR02795 tol_pal_ybgF tol-pal system protein YbgF; InterPro: IPR014162 Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, and a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction..
Probab=99.90  E-value=5.9e-23  Score=151.96  Aligned_cols=118  Identities=21%  Similarity=0.339  Sum_probs=112.0

Q ss_pred             HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf             89999999999980989999999999985304773026899877887765455567999998875401121101355544
Q gi|254781174|r   57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL  136 (271)
Q Consensus        57 ~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y~  136 (271)
T Consensus         2 ~~~~y~aa~~~lk~gdY~~A~~~F~~F~~~YP~S~y~pnA~YWLGe~~y~~~~~~~A~~~f~~v~~~yp~s~KaPdALLK   81 (119)
T TIGR02795         2 EEAYYDAALLVLKAGDYADAIQAFQAFLKKYPKSTYAPNAHYWLGEAYYAQGDYADAAKAFLAVVKKYPKSPKAPDALLK   81 (119)
T ss_pred             CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf             16789999999853887899999999988687987671054799999999733999999999998645899860689999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf             3444555544311123458999999999998520010134565555
Q gi|254781174|r  137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV  182 (271)
Q Consensus       137 ~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l  182 (271)
T Consensus        82 lg~~~~~~--------g~~~~A~~~l~~V~~~YP~s~aA~~A~~~l  119 (119)
T TIGR02795        82 LGMSLQEL--------GDKEKAKATLQQVIKRYPGSSAAKLAQKRL  119 (119)
T ss_pred             HHHHHHHH--------CCHHHHHHHHHHHHHHCCCCHHHHHHHHHC
T ss_conf             99999872--------898899999999985669987889997509