HHsearch alignment for GI: 254781174 and conserved domain: pfam04733
>pfam04733 Coatomer_E Coatomer epsilon subunit. This family represents the epsilon subunit of the coatomer complex, which is involved in the regulation of intracellular protein trafficking between the endoplasmic reticulum and the Golgi complex.
Probab=98.72 E-value=1e-05 Score=51.46 Aligned_cols=174 Identities=11% Similarity=0.141 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 89999999999980989999999999985304773026899877887765455567999998875401121101355544
Q gi|254781174|r 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 (271)
Q Consensus 57 ~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y~ 136 (271)
T Consensus 102 ~~~~~~aati~~~~g~~e~AL~~l~~~--------~~lE~~al~VQi~L~~nR~DLA~ke~~~~q~~~eDs~l-----~q 168 (290)
T pfam04733 102 STLRLLAAIIFIHEGDFDDALKHLHKG--------ENLEAMALNVQILLKMHRIDLAEQQLKKMQQIDEDATL-----TQ 168 (290)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHCC--------CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHH-----HH
T ss_conf 899999999999779999999998558--------96679999999999728836799999998843510599-----99
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 34445555443111234589999999999985200101345655555556666666555666665443223456899988
Q gi|254781174|r 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 (271)
Q Consensus 137 ~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l~~~~~~La~~e~~ia~~Y~~~~~y~aA~~~~~~~ 216 (271)
T Consensus 169 La~awv~l~----~Ggek~q~A~yif~EL~~~~~~t~llln-----------------g~Av~~m~~~~~~eAe~~L~eA 227 (290)
T pfam04733 169 LANAWVKLA----VGGEKIQDAYYIFQEFSEKYDSTPLLLN-----------------GQAVCCMCLGRYEEAESLLKEA 227 (290)
T ss_pred HHHHHHHHH----HCCHHHHHHHHHHHHHHHHCCCCHHHHH-----------------HHHHHHHHCCCHHHHHHHHHHH
T ss_conf 999999997----2647789899999999852289789999-----------------9999998747879999999999
Q ss_pred HHHCCCCHHHHHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 65289981159999999999997498799-9999999978569997899999
Q gi|254781174|r 217 LANYSDAEHAEEAMARLVEAYVALALMDE-AREVVSLIQERYPQGYWARYVE 267 (271)
Q Consensus 217 i~~yp~t~~~~eAl~~l~~~y~~lg~~d~-A~~~~~~l~~~yP~s~~~~~a~ 267 (271)
T Consensus 228 l~~d~~d---~dtlaNliv~s~~~gK~~e~~~ryl~qL~~~~p~H~~v~~~~ 276 (290)
T pfam04733 228 LDKDAKD---PETLINLVVCALHLGKPAEVSNRNLSQLKLSHPTHPLVKDLN 276 (290)
T ss_pred HHHCCCC---HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 8728898---899999999999809987899999999986299985999999