HHsearch alignment for GI: 254781174 and conserved domain: pfam09295
>pfam09295 ChAPs ChAPs (Chs5p-Arf1p-binding proteins). ChAPs (Chs5p-Arf1p-binding proteins) are required for the export of specialized cargo from the Golgi. They physically interact with Chs3, Chs5 and the small GTPase Arf1, and they form also interactions with each other.
Probab=97.40 E-value=0.003 Score=37.04 Aligned_cols=109 Identities=17% Similarity=0.149 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 45556799999887540112110135554434445555443111234589999999999985200101345655555556
Q gi|254781174|r 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 (271)
Q Consensus 107 ~~~y~~A~~~~~~fi~~~P~s~~~~~A~y~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l~~~~ 186 (271)
T Consensus 182 t~~~~~~~~~le~L~~~~p~------v~~llakv~~~~--------~~E~~av~~i~~~L~~~p~d~~------------ 235 (395)
T pfam09295 182 TKRYDRALNLLEKLREEEPE------VVSLLARVLLLM--------DEEIDAVKLMHDALQENPMDYE------------ 235 (395)
T ss_pred CCCHHHHHHHHHHHHHCCCH------HHHHHHHHHHHC--------CCHHHHHHHHHHHHHCCCCCHH------------
T ss_conf 44389899999998751844------999999999965--------6089999999999861887678------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 666666555666665443223456899988652899811599999999999974987999999
Q gi|254781174|r 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 (271)
Q Consensus 187 ~~La~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~yp~t~~~~eAl~~l~~~y~~lg~~d~A~~~ 249 (271)
T Consensus 236 -LL----~~Qa~FLl~K~~yelAL~~A~~av~~~P~~F---~~W~~La~~Yi~l~d~e~ALl~ 290 (395)
T pfam09295 236 -LL----CLQAEFLLSKKKDELALECAKRAVNSAPSEF---KTWALLVKVYIKLEDWENALLT 290 (395)
T ss_pred -HH----HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC---HHHHHHHHHHHHHHHHHHHHHH
T ss_conf -99----9999999817988999999999873178661---8899999999986329999999