HHsearch results for GI: 254781174 and protein with PDBid: 1fch_A
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 2c0m_A 2c0l_A
Probab=99.77 E-value=2.1e-16 Score=112.47 Aligned_cols=189 Identities=12% Similarity=0.065 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 89999999999980989999999999985304773026899877887765455567999998875401121101355544
Q gi|254781174|r 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 (271)
Q Consensus 57 ~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y~ 136 (271)
....|++|..+++.|++++|+..|++++...|.. +++.+.+|.++..+|++++|+..|++.++..|+++ .+++.
T Consensus 64 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~---~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~ 137 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKH---MEAWQYLGTTQAENEQELLAISALRRCLELKPDNQ---TALMA 137 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHH
T ss_pred CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH---HHHHH
T ss_conf 6889999999998599999999999999729998---99999999999987999999999999987199989---99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH-----------------------------HHHHHHH---
Q ss_conf 34445555443111234589999999999985200101345-----------------------------6555555---
Q gi|254781174|r 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG-----------------------------ARFYVTV--- 184 (271)
Q Consensus 137 ~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~-----------------------------A~~~l~~--- 184 (271)
.|.++..+ +...+|+..++..+...|....... |......
T Consensus 138 ~~~~~~~~--------~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ea~~~~~~a~~ 209 (368)
T 1fch_A 138 LAVSFTNE--------SLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVR 209 (368)
T ss_dssp HHHHHHHT--------TCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHC--------CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 99999983--------8841023688899986810699987787777777778999999999874139999999999998
Q ss_pred HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH
Q ss_conf 566--666665556666654432234568999886528998115999999999999749879999999999785699978
Q gi|254781174|r 185 GRN--QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 (271)
Q Consensus 185 ~~~--~La~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~yp~t~~~~eAl~~l~~~y~~lg~~d~A~~~~~~l~~~yP~s~~ 262 (271)
+.. .-+.-...+|..|...|+|..|+..|+.++...|+. .++++.+|.+|..+|..++|.+.++......|+..+
T Consensus 210 ~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~ 286 (368)
T 1fch_A 210 LDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPND---YLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIR 286 (368)
T ss_dssp HSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH
T ss_conf 48542014777779999988244777999899999869997---999999999999878999999999999974999899