HHsearch results for GI: 254781174 and protein with PDBid: 1fch_A
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 2c0m_A 2c0l_A
Probab=99.67 E-value=3e-14 Score=99.88 Aligned_cols=200 Identities=11% Similarity=-0.028 Sum_probs=142.7
Q ss_pred CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 36899999999999809899999999999853047730268998778877654555679999988754011211013555
Q gi|254781174|r 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 (271)
Q Consensus 55 ~~~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~ 134 (271)
..+..++..|..+.+.|++++|+..|++++...|.. ..+.+.+|.++..+|++++|+..+++.+...|....+....
T Consensus 96 ~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 172 (368)
T 1fch_A 96 KHMEAWQYLGTTQAENEQELLAISALRRCLELKPDN---QTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPA 172 (368)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC--
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC---HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 989999999999998799999999999998719998---99999999999983884102368889998681069998778
Q ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH--------------------HHHHHH
Q ss_conf 4----4344455554431112345899999999999852001013456555555--------------------566666
Q gi|254781174|r 135 Y----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV--------------------GRNQLA 190 (271)
Q Consensus 135 y----~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l~~--------------------~~~~La 190 (271)
. ..++.............+...+|+..|...+...|++.-+ .+...+.. +....+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~ea~~~~~~a~~~~~~~~~~-~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 251 (368)
T 1fch_A 173 EEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDP-DVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDY 251 (368)
T ss_dssp -------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCH-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCH
T ss_conf 777777777899999999987413999999999999848542014-7777799999882447779998999998699979
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
Q ss_conf 66555666665443223456899988652899811599999999999974987999999999978569997
Q gi|254781174|r 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 (271)
Q Consensus 191 ~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~yp~t~~~~eAl~~l~~~y~~lg~~d~A~~~~~~l~~~yP~s~ 261 (271)
.--+.+|..|...|++..|+..|+..++..|+.+ ++++.+|.+|..+|..++|.+.++....-.|++.
T Consensus 252 ~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~---~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~p~~~ 319 (368)
T 1fch_A 252 LLWNKLGATLANGNQSEEAVAAYRRALELQPGYI---RSRYNLGISCINLGAHREAVEHFLEALNMQRKSR 319 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH
T ss_conf 9999999999987899999999999997499989---9999999999986999999999999987198683