HHsearch results for GI: 254781174 and protein with PDBid: 1ouv_A
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix- turn-helix, repeat protein; 2.00A {Helicobacter pylori 26695} SCOP: a.118.18.1
Probab=98.31 E-value=0.00011 Score=44.20 Aligned_cols=187 Identities=14% Similarity=0.078 Sum_probs=101.9
Q ss_pred CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH-CCCCCH
Q ss_conf 3689999999999980989999999999985304773026899877887765----45556799999887540-112110
Q gi|254781174|r 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS----AGKYQQAASLGEEYITQ-YPESKN 129 (271)
Q Consensus 55 ~~~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~----~~~y~~A~~~~~~fi~~-~P~s~~ 129 (271)
..|+++|..|..+++++||++|++.|++..+.. -+.|++.+|..|+. .++++.|+..+.+.... +|....
T Consensus 4 ~~~~~l~~lG~~~~~~~d~~~A~~~y~kAa~~g-----~~~A~~~Lg~~y~~G~g~~~d~~~a~~~~~~~a~~~~~~~~~ 78 (273)
T 1ouv_A 4 QDPKELVGLGAKSYKEKDFTQAKKYFEKACDLK-----ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCH 78 (273)
T ss_dssp -CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHH
T ss_conf 699999999999998689999999999999889-----999999999999869996225999999998755327724544
Q ss_pred H------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHH----
Q ss_conf 1------------------------------35554434445555443111234589999999999985-200101----
Q gi|254781174|r 130 V------------------------------DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER-YTNSPY---- 174 (271)
Q Consensus 130 ~------------------------------~~A~y~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~-yP~S~y---- 174 (271)
. ..|.+.+|..+.... ........+...+...... .|.+-+
T Consensus 79 ~~~~~~~~~~~~~~~~~~a~~~~~~a~~~g~~~a~~~Lg~~~~~~~----~~~~~~~~a~~~~~~~~~~~~~~~~~~lg~ 154 (273)
T 1ouv_A 79 LLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGK----VVTRDFKKAVEYFTKACDLNDGDGCTILGS 154 (273)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCS----SSCCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----CCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 1010331266620667779998998987537999999757741688----741568889999999986277489999869
Q ss_pred ----------H-HHHHHHHHH-HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf ----------3-456555555-566666665556666654----432234568999886528998115999999999999
Q gi|254781174|r 175 ----------V-KGARFYVTV-GRNQLAAKEVEIGRYYLK----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 (271)
Q Consensus 175 ----------a-~~A~~~l~~-~~~~La~~e~~ia~~Y~~----~~~y~aA~~~~~~~i~~yp~t~~~~eAl~~l~~~y~ 238 (271)
. ..+...+.. ....-+...+.+|..|.. .+++..|+..|+..++. -.++|.+.||..|.
T Consensus 155 ~y~~~~~~~~~~~~~~~~~~~a~~~~~~~A~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~~-----g~~~A~~~LG~~y~ 229 (273)
T 1ouv_A 155 LYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACEL-----ENGGGCFNLGAMQY 229 (273)
T ss_dssp HHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHT-----TCHHHHHHHHHHHH
T ss_pred HHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC-----CCHHHHHHHHHHHH
T ss_conf 8765897510199999999998664884699998877117888444799988999999988-----99999999999998
Q ss_pred H-CC---CHHHHHHHHHHHHH
Q ss_conf 7-49---87999999999978
Q gi|254781174|r 239 A-LA---LMDEAREVVSLIQE 255 (271)
Q Consensus 239 ~-lg---~~d~A~~~~~~l~~ 255 (271)
. .| +.++|..+++.-..
T Consensus 230 ~G~g~~~d~~~A~~~~~~Aa~ 250 (273)
T 1ouv_A 230 NGEGVTRNEKQAIENFKKGCK 250 (273)
T ss_dssp TTSSSSCCSTTHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHH
T ss_conf 399974389999999999998