HHsearch results for GI: 254781174 and protein with PDBid: 1w3b_A
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.68 E-value=8.3e-15 Score=103.17 Aligned_cols=201 Identities=11% Similarity=0.006 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 89999999999980989999999999985304773026899877887765455567999998875401121101355544
Q gi|254781174|r 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 (271)
Q Consensus 57 ~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y~ 136 (271)
+..++..|..+++.|++++|+..|++++...|.+ +++.+.+|.++..+|++++|+..+...++..|...........
T Consensus 33 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 109 (388)
T 1w3b_A 33 TGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLL---AEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAA 109 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 9999999999998699999999999999869998---9999999999998698343256532101037314678887621
Q ss_pred HHHH-------------------------------HH------------H--------------HHHHHHHHHHHHHHHH
Q ss_conf 3444-------------------------------55------------5--------------5443111234589999
Q gi|254781174|r 137 VGMS-------------------------------YA------------Q--------------MIRDVPYDQRATKLML 159 (271)
Q Consensus 137 ~a~~-------------------------------~~------------~--------------~~~~~~~d~~~~~~A~ 159 (271)
.... .. . .........+...+|.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~ 189 (388)
T 1w3b_A 110 ALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAI 189 (388)
T ss_dssp HHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 02210107888888776664211479999987555441020788889999775049640799999889988348699999
Q ss_pred HHHHHHHHHHHCCHHHHH--------------HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999999985200101345--------------655555---556666666555666665443223456899988652899
Q gi|254781174|r 160 QYMSRIVERYTNSPYVKG--------------ARFYVT---VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 (271)
Q Consensus 160 ~~f~~~i~~yP~S~ya~~--------------A~~~l~---~~~~~La~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~yp~ 222 (271)
..+++.+...|++.-+-. |..... .....-......+|..|.+.|++..|+..|+.+++..|+
T Consensus 190 ~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 269 (388)
T 1w3b_A 190 HHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPH 269 (388)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
T ss_conf 99999988397609999999999885687999999999998849752799999999999879999999999999972999
Q ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 81159999999999997498799999999997856999789
Q gi|254781174|r 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 (271)
Q Consensus 223 t~~~~eAl~~l~~~y~~lg~~d~A~~~~~~l~~~yP~s~~~ 263 (271)
. ++++..++.++..+|..++|.+.+.......|+....
T Consensus 270 ~---~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 307 (388)
T 1w3b_A 270 F---PDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADS 307 (388)
T ss_dssp C---HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHH
T ss_pred C---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH
T ss_conf 8---9999999999998477999999888776328603688