HHsearch results for GI: 254781174 and protein with PDBid: 2h6f_A
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.22 E-value=4.1e-09 Score=69.99 Aligned_cols=100 Identities=10% Similarity=0.067 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHC-CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 9999999999809-899999999999853047730268998778877654555679999988754011211013555443
Q gi|254781174|r 59 EVYEKAVLFLKEQ-NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 (271)
Q Consensus 59 ~lY~~a~~~~~~~-~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y~~ 137 (271)
..+.+|..+...+ +|.+|+..+++++...|.+ .++....|.++..+|++++|+..+++.++..|++.. +++.+
T Consensus 133 aw~~r~~~l~~l~~~~~~al~~~~~~l~~~pk~---~~~~~~~g~~~~~l~~~~~Al~~~~~al~~~p~n~~---a~~~~ 206 (382)
T 2h6f_A 133 VWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKN---YQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYH---AWQHR 206 (382)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHH---HHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH---HHHHH
T ss_conf 999999999980748999999999999878998---899999999999825799999999999863865689---88898
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 44455554431112345899999999999852001
Q gi|254781174|r 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 (271)
Q Consensus 138 a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S 172 (271)
|.++... +...+|+..++.+++..|..
T Consensus 207 ~~~~~~~--------~~~~~al~~~~~~i~~dp~n 233 (382)
T 2h6f_A 207 QWVIQEF--------KLWDNELQYVDQLLKEDVRN 233 (382)
T ss_dssp HHHHHHH--------TCCTTHHHHHHHHHHHCTTC
T ss_pred HHHHHHH--------HHHHHHHHHHHHHHHCCCCC
T ss_conf 9999972--------31689999999999829973