HHsearch results for GI: 254781174 and protein with PDBid: 2ond_A
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.43 E-value=6.4e-05 Score=45.50 Aligned_cols=178 Identities=11% Similarity=0.038 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 99999999999809899999999999853047730268998778877654555679999988754011211013555443
Q gi|254781174|r 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 (271)
Q Consensus 58 ~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y~~ 137 (271)
.-....+......|+++.|...|++.+...|... .......+......|+...|...|++.++..|.++.+ +...
T Consensus 100 ~lw~~~a~~e~~~~~~~~a~~i~~~~l~~~~~~~--~~~w~~y~~~~~~~~~~~~a~~i~~~al~~~p~~~~~---~~~~ 174 (308)
T 2ond_A 100 LLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDP--TLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHV---YVTA 174 (308)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCT--HHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHH---HHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH--HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH---HHHH
T ss_conf 9999999999984999989999999988502347--9999999999998188799999999999848996199---9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 44455554431112345899999999999852001013456555555566666665556666654432234568999886
Q gi|254781174|r 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 (271)
Q Consensus 138 a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l~~~~~~La~~e~~ia~~Y~~~~~y~aA~~~~~~~i 217 (271)
|...+ ...+....|...|+..+..+|+++..- ...+++..+.|+...|...|+..+
T Consensus 175 a~~e~-------~~~~~~~~a~~i~e~~l~~~~~~~~~w-----------------~~y~~~~~~~g~~~~AR~~ferai 230 (308)
T 2ond_A 175 ALMEY-------YCSKDKSVAFKIFELGLKKYGDIPEYV-----------------LAYIDYLSHLNEDNNTRVLFERVL 230 (308)
T ss_dssp HHHHH-------HTSCCHHHHHHHHHHHHHHHTTCHHHH-----------------HHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHH-------HHCCCHHHHHHHHHHHHHHCCCCHHHH-----------------HHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 99999-------856887999999999987589989999-----------------999999998889999999999999
Q ss_pred HHCCCCHHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 528998115-99999999999974987999999999978569997899
Q gi|254781174|r 218 ANYSDAEHA-EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 (271)
Q Consensus 218 ~~yp~t~~~-~eAl~~l~~~y~~lg~~d~A~~~~~~l~~~yP~s~~~~ 264 (271)
..-|.++.. ........+--...|+.+.+.+..+.....+|+.....
T Consensus 231 ~~~~~~~~~~~~iw~~~~~fE~~~G~~~~~~~~~~R~~~~~~~~~~~~ 278 (308)
T 2ond_A 231 TSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFREEYEGK 278 (308)
T ss_dssp HSSSSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTTTTSSC
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHCCCCC
T ss_conf 808998789999999999999985999999999999998682001211