HHsearch results for GI: 254781174 and protein with PDBid: 2ooe_A
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.00 E-value=1.7e-08 Score=66.39 Aligned_cols=160 Identities=14% Similarity=0.048 Sum_probs=69.8
Q ss_pred HHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 80989999999999985304773026899877887765455567999998875401121101355544344455554431
Q gi|254781174|r 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 (271)
Q Consensus 69 ~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y~~a~~~~~~~~~~ 148 (271)
..+++++|+..|+..+...|... ....+.++..+...|+++.|...+++.+...|.+.. .++...|..+..
T Consensus 298 ~~~~~~~a~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~--~~~~~~~~~~~~----- 368 (530)
T 2ooe_A 298 AKLFSDEAANIYERAISTLLKKN--MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPT--LVYIQYMKFARR----- 368 (530)
T ss_dssp HHHHHHHHHHHHHHHTTTTCSSC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHH--HHHHHHHHHHHH-----
T ss_pred HHHCHHHHHHHHHHHHHCCCCCH--HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHH--HHHHHHHHHHHH-----
T ss_conf 73033889999988885053001--789999999986302189999999987762661458--999999999998-----
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 112345899999999999852001013456555555566666665556666-6544322345689998865289981159
Q gi|254781174|r 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-YLKRGEYVAAIPRFQLVLANYSDAEHAE 227 (271)
Q Consensus 149 ~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l~~~~~~La~~e~~ia~~-Y~~~~~y~aA~~~~~~~i~~yp~t~~~~ 227 (271)
.+...+|+..|++.+...|+++.+- ...|.+ +...|++..|+..|+..++..|+++
T Consensus 369 ---~~~~~~A~~~~~~al~~~p~~~~~~-----------------~~~a~l~~~~~~~~~~A~~~~~~al~~~p~~~--- 425 (530)
T 2ooe_A 369 ---AEGIKSGRMIFKKAREDARTRHHVY-----------------VTAALMEYYCSKDKSVAFKIFELGLKKYGDIP--- 425 (530)
T ss_dssp ---HHHHHHHHHHHHHHHTCTTCCTHHH-----------------HHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCH---
T ss_pred ---CCCHHHHHHHHHHHHHHCCCCHHHH-----------------HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH---
T ss_conf ---0668999999999998489979999-----------------99999998865479999999999986499969---
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 999999999997498799999999997856999
Q gi|254781174|r 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 (271)
Q Consensus 228 eAl~~l~~~y~~lg~~d~A~~~~~~l~~~yP~s 260 (271)
+.+...+..+..+|..++|+..++......|.+
T Consensus 426 ~~~~~~~~~~~~~g~~~~Ar~~~e~al~~~~~~ 458 (530)
T 2ooe_A 426 EYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLP 458 (530)
T ss_dssp HHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
T ss_conf 999999999988889999999999998668998