HHsearch results for GI: 254781174 and protein with PDBid: 2vyi_A
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.33 E-value=2.9e-11 Score=82.52 Aligned_cols=108 Identities=16% Similarity=0.168 Sum_probs=95.0
Q ss_pred CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 67368999999999998098999999999998530477302689987788776545556799999887540112110135
Q gi|254781174|r 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 (271)
Q Consensus 53 ~~~~~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~ 132 (271)
+...++.++.+|..+++.|+|.+|+..|++++...|.. ..+.+.+|.+++.++++++|+..+++.++..|+++.
T Consensus 8 ~~~~~e~l~~~G~~~~~~~~y~~A~~~~~~al~~~p~~---~~~~~~l~~~~~~~~~~~~A~~~~~~~l~~~p~~~~--- 81 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPAN---AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSK--- 81 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH---
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH---
T ss_conf 79999999999999999589999999999999868998---999984889988727768899999999988632379---
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 554434445555443111234589999999999985200101
Q gi|254781174|r 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 (271)
Q Consensus 133 A~y~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~y 174 (271)
+++.+|.++..+ +...+|+..|+..++..|+++.
T Consensus 82 ~~~~lg~~~~~~--------~~~~~A~~~~~~al~~~p~~~~ 115 (131)
T 2vyi_A 82 AYGRMGLALSSL--------NKHVEAVAYYKKALELDPDNET 115 (131)
T ss_dssp HHHHHHHHHHHT--------TCHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHHHHHHHCC--------CCHHHHHHHHHHHHHHCCCCHH
T ss_conf 998899998502--------5699999999999976969899