HHsearch results for GI: 254781174 and protein with PDBid: 3cv0_A
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.78 E-value=8e-17 Score=114.93 Aligned_cols=192 Identities=14% Similarity=0.027 Sum_probs=124.2
Q ss_pred CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 68999999999998098999999999998530477302689987788776545556799999887540112110135554
Q gi|254781174|r 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 (271)
Q Consensus 56 ~~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y 135 (271)
..+..|++|..+++.|++.+|+..|++++...|.. .++...+|.++...|++++|+..+++.++..|+++. ++.
T Consensus 20 ~~~~~~~~g~~~~~~g~~~eA~~~~~~al~~~P~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~---~~~ 93 (327)
T 3cv0_A 20 YHENPMEEGLSMLKLANLAEAALAFEAVCQAAPER---EEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIA---VHA 93 (327)
T ss_dssp GSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH---HHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH---HHH
T ss_conf 67999999999998699999999999999878998---999999999999879999999999999873988699---999
Q ss_pred HHHHHHHHHHH------------H-----------------------------HHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 43444555544------------3-----------------------------111234589999999999985200101
Q gi|254781174|r 136 LVGMSYAQMIR------------D-----------------------------VPYDQRATKLMLQYMSRIVERYTNSPY 174 (271)
Q Consensus 136 ~~a~~~~~~~~------------~-----------------------------~~~d~~~~~~A~~~f~~~i~~yP~S~y 174 (271)
..|.++..+.. . .....+...+|+..++..+...|+..-
T Consensus 94 ~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 173 (327)
T 3cv0_A 94 ALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQ 173 (327)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH
T ss_conf 98899987174156999876444027307888765424566665699999999999877899999999999974986203
Q ss_pred HHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 34565555555--------------------6666666555666665443223456899988652899811599999999
Q gi|254781174|r 175 VKGARFYVTVG--------------------RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 (271)
Q Consensus 175 a~~A~~~l~~~--------------------~~~La~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~yp~t~~~~eAl~~l~ 234 (271)
+ ...+..+ ...-+.--..+|..|.+.|++..|+..|+.+++..|+. +++++.+|
T Consensus 174 ~---~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~l~p~~---~~~~~~lg 247 (327)
T 3cv0_A 174 L---HASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGY---VRVMYNMA 247 (327)
T ss_dssp H---HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHH
T ss_pred H---HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC---HHHHHHHH
T ss_conf 4---44012210255449999999999886187879999999999998478999999999999859898---99999999
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHCCC
Q ss_conf 9999749879999999999785699
Q gi|254781174|r 235 EAYVALALMDEAREVVSLIQERYPQ 259 (271)
Q Consensus 235 ~~y~~lg~~d~A~~~~~~l~~~yP~ 259 (271)
.+|..+|..++|.+.+...+.-.|+
T Consensus 248 ~~~~~~g~~~~A~~~~~~ai~l~~~ 272 (327)
T 3cv0_A 248 VSYSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHCCCHHHHHHHHHHHHHCCCC
T ss_conf 9999849999999999999868999