HHsearch results for GI: 254781174 and protein with PDBid: 3edt_B
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics consortium, SGC, coiled coil, microtubule, motor protein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.54 E-value=2e-12 Score=89.27 Aligned_cols=175 Identities=17% Similarity=0.203 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CC
Q ss_conf 8999999999998098999999999998530-----4773026899877887765455567999998875401-----12
Q gi|254781174|r 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDF-----PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY-----PE 126 (271)
Q Consensus 57 ~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~-----P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~-----P~ 126 (271)
+..+...|..+...|+|++|+..|++....+ +.......+...+|.++...|++++|+..+++.++.+ ++
T Consensus 43 a~~l~~Lg~~y~~~g~~~~Al~~~~~al~~~~~~~~~~~~~~a~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 122 (283)
T 3edt_B 43 ATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKF 122 (283)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999987999999999999999988743899889999999999999986887889987888999999861668
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1101355544344455554431112345899999999999852-----00101345655555556666666555666665
Q gi|254781174|r 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY-----TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 (271)
Q Consensus 127 s~~~~~A~y~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~y-----P~S~ya~~A~~~l~~~~~~La~~e~~ia~~Y~ 201 (271)
+|....+++.+|.++.. ++...+|+..|++.+..+ |+++-..++. ..+|..|.
T Consensus 123 ~~~~~~~~~~lg~~~~~--------~g~~~~A~~~~~~al~i~~~~~~~~~~~~a~~~--------------~~Lg~~~~ 180 (283)
T 3edt_B 123 HPDVAKQLNNLALLCQN--------QGKAEEVEYYYRRALEIYATRLGPDDPNVAKTK--------------NNLASCYL 180 (283)
T ss_dssp CHHHHHHHHHHHHHHHT--------TTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHH--------------HHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH--------CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH--------------HHHHHHHH
T ss_conf 86899999987176550--------375588999888899999986289998999999--------------99999998
Q ss_pred HHHHHHHHHHHHHHHHHH----------------------------------------------CCCCHHHHHHHHHHHH
Q ss_conf 443223456899988652----------------------------------------------8998115999999999
Q gi|254781174|r 202 KRGEYVAAIPRFQLVLAN----------------------------------------------YSDAEHAEEAMARLVE 235 (271)
Q Consensus 202 ~~~~y~aA~~~~~~~i~~----------------------------------------------yp~t~~~~eAl~~l~~ 235 (271)
+.|++..|+..|+.+++. -++.+....++..|+.
T Consensus 181 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~La~ 260 (283)
T 3edt_B 181 KQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGA 260 (283)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 76879999999999999877765544256678888887755521469999999999999999864388469999999999
Q ss_pred HHHHCCCHHHHHHHHHHH
Q ss_conf 999749879999999999
Q gi|254781174|r 236 AYVALALMDEAREVVSLI 253 (271)
Q Consensus 236 ~y~~lg~~d~A~~~~~~l 253 (271)
+|..+|..++|.+..+..
T Consensus 261 ~y~~~G~~~eA~~l~e~A 278 (283)
T 3edt_B 261 LYRRQGKLEAAHTLEDCA 278 (283)
T ss_dssp HHHHTTCHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHH
T ss_conf 999819999999999999