HHsearch results for GI: 254781174 and protein with PDBid: 3n71_A
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.42 E-value=8.9e-06 Score=50.50 Aligned_cols=139 Identities=14% Similarity=0.119 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 87788776545556799999887540-----1121101355544344455554431112345899999999999852001
Q gi|254781174|r 98 LMSAFVQYSAGKYQQAASLGEEYITQ-----YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 (271)
Q Consensus 98 ~~la~~~y~~~~y~~A~~~~~~fi~~-----~P~s~~~~~A~y~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S 172 (271)
+..+......+++++|+..+++.++. .|.|+.+..++..+|.++.. ++..++|+..+++.++-+...
T Consensus 313 ~e~~~~~~~~~~~~ea~~l~~~~L~~~~~il~~~h~~~~~~~~~l~~~~~~--------~g~~~~A~~~~~~~l~~~~~~ 384 (490)
T 3n71_A 313 LEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY--------LQAYEEASHYARRMVDGYMKL 384 (490)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH--------TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH--------CCCHHHHHHHHHHHHHHHHHH
T ss_conf 787876663367788899999999998750699627789999999999998--------779889999999999999997
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 013456555555566666665556666654432234568999886528-----998115999999999999749879999
Q gi|254781174|r 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY-----SDAEHAEEAMARLVEAYVALALMDEAR 247 (271)
Q Consensus 173 ~ya~~A~~~l~~~~~~La~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~y-----p~t~~~~eAl~~l~~~y~~lg~~d~A~ 247 (271)
+..+ ...+|..-..+|..|...|++..|+..++..++-. |+.+.+.+....++.+|.++|+.++|.
T Consensus 385 -~g~~--------h~~~a~~~~~lg~~~~~~~~~~~A~~~~~kAl~i~~~~~G~~hp~~~~l~~~l~~~~~~l~~~~~a~ 455 (490)
T 3n71_A 385 -YHHN--------NAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNE 455 (490)
T ss_dssp -SCTT--------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCC--------CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -6999--------9899999999999999878989999999999999999749998429999999999999986578889
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254781174|r 248 EVVSLI 253 (271)
Q Consensus 248 ~~~~~l 253 (271)
..+..+
T Consensus 456 ~~~~~~ 461 (490)
T 3n71_A 456 FMYHKM 461 (490)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999999