BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781174|ref|YP_003065587.1| outer membrane assembly lipoprotein YfiO [Candidatus Liberibacter asiaticus str. psy62] (271 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254781174|ref|YP_003065587.1| outer membrane assembly lipoprotein YfiO [Candidatus Liberibacter asiaticus str. psy62] gi|254040851|gb|ACT57647.1| outer membrane assembly lipoprotein YfiO [Candidatus Liberibacter asiaticus str. psy62] Length = 271 Score = 550 bits (1418), Expect = e-155, Method: Compositional matrix adjust. Identities = 271/271 (100%), Positives = 271/271 (100%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV Sbjct: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY Sbjct: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF Sbjct: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL Sbjct: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ALMDEAREVVSLIQERYPQGYWARYVETLVK Sbjct: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271 >gi|315122569|ref|YP_004063058.1| outer membrane assembly lipoprotein YfiO [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495971|gb|ADR52570.1| outer membrane assembly lipoprotein YfiO [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 258 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 146/255 (57%), Positives = 190/255 (74%), Gaps = 2/255 (0%) Query: 19 LYKFALTIFFSIAVCFLVGWERQS--SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 +Y+F LTIFF + FL + Q+ S++ S++D +YQR +YEKAV L+ +NF KA Sbjct: 1 MYRFVLTIFFISTLSFLASCKHQNQPSQNFIFPSISDKKYQRNLYEKAVELLENKNFEKA 60 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + F S++ PF VARK+LLMSAF +Y KY +ASLGEEYI QYP S+++DYVYYL Sbjct: 61 SKEFYSFSKELPFNDVARKALLMSAFAKYKTKKYLSSASLGEEYIAQYPNSEDIDYVYYL 120 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 VGMSYAQ IR+V YDQ T+ M+QYMS I+E+Y SPY KGA+FY+++GRNQLA +E+ + Sbjct: 121 VGMSYAQKIRNVSYDQHPTQSMVQYMSEILEKYPKSPYSKGAQFYLSIGRNQLAGQEMYV 180 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 GRYYLK EYV+AI RFQLV+ANY D E EEAMARLVEAY L L+DEA + S+IQ++ Sbjct: 181 GRYYLKNKEYVSAILRFQLVIANYFDTEQVEEAMARLVEAYFMLGLVDEATSMASVIQQK 240 Query: 257 YPQGYWARYVETLVK 271 YP+G W+ YV LV+ Sbjct: 241 YPKGLWSDYVSDLVQ 255 >gi|218659461|ref|ZP_03515391.1| hypothetical protein RetlI_07243 [Rhizobium etli IE4771] Length = 294 Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 86/203 (42%), Positives = 133/203 (65%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + + +K N ++A F+ R+ PF+ ARK+L+MS FV+Y GK+ A + G Sbjct: 58 LYTQGLANMKAGNMAEAARKFDAIDRENPFSEWARKALVMSTFVKYRQGKFDDALASGNR 117 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 Y+ QYP+S++ YV YLVG++Y++ I DV DQRA+ ++ M +V+ Y NS YV A+ Sbjct: 118 YMAQYPKSQDAAYVQYLVGLTYSKQIVDVTQDQRASAKTIEAMQAVVDNYPNSEYVDDAQ 177 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + R+QLA KE++IGRYY++R EY+AAI RF++V+ Y + EEA+ARLVEAY A Sbjct: 178 AKIRYARDQLAGKEMQIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYA 237 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 + ++DEA+ +++ YP W Sbjct: 238 MGIVDEAQTAAAVLGHNYPDSQW 260 >gi|241205546|ref|YP_002976642.1| outer membrane assembly lipoprotein YfiO [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859436|gb|ACS57103.1| outer membrane assembly lipoprotein YfiO [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 281 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 84/203 (41%), Positives = 133/203 (65%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + + +K N ++A F+ R+ PF+ ARK+L+MS FV+Y G+ A + G Sbjct: 45 LYTQGLANMKAGNMAEAARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALASGNR 104 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 Y++QYP+S++ YV YL+G++Y++ I DV DQRA+ ++ M +++ Y NS YV A+ Sbjct: 105 YMSQYPKSQDAAYVQYLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQ 164 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + R+QLA KE++IGRYYL+R EY+AAI RF++V+ Y + EEA+ARLVEAY A Sbjct: 165 AKIRFSRDQLAGKEMQIGRYYLERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYA 224 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 + ++DEA+ +++ YP W Sbjct: 225 MGIVDEAQTAAAVLGHNYPDSQW 247 >gi|209550164|ref|YP_002282081.1| outer membrane assembly lipoprotein YfiO [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535920|gb|ACI55855.1| outer membrane assembly lipoprotein YfiO [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 281 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 83/203 (40%), Positives = 133/203 (65%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + + +K N ++A F+ R+ PF+ ARK+L+MS FV+Y G+ A + G Sbjct: 45 LYTQGLANMKAGNMAEAARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALTSGNR 104 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 Y++QYP+S++ YV YL+G++Y++ I DV DQRA+ ++ M +++ Y NS YV A+ Sbjct: 105 YMSQYPKSQDAAYVQYLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQ 164 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + R+QLA KE++IGRYY++R EY+AAI RF++V+ Y + EEA+ARLVEAY A Sbjct: 165 AKIRFARDQLAGKEMQIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYA 224 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 + ++DEA+ +++ YP W Sbjct: 225 MGIVDEAQTAAAVLGHNYPDSQW 247 >gi|190892573|ref|YP_001979115.1| competence lipoprotein protein [Rhizobium etli CIAT 652] gi|190697852|gb|ACE91937.1| competence lipoprotein protein [Rhizobium etli CIAT 652] gi|327194613|gb|EGE61463.1| competence lipoprotein protein [Rhizobium etli CNPAF512] Length = 289 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 86/203 (42%), Positives = 131/203 (64%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + + +K N ++A F+ R+ PF+ ARK+L+MS FV+Y GK A + G Sbjct: 53 LYTQGLANMKAGNMAEAARKFDAIDRENPFSEWARKALVMSTFVKYRQGKLDDALASGNR 112 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 Y+ QYP+S++ YV YLVG++Y++ I DV DQRA ++ M +V+ Y NS YV A+ Sbjct: 113 YMAQYPKSQDAAYVQYLVGLTYSKQIVDVTQDQRAAAKTIEAMQAVVDNYPNSEYVDDAQ 172 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + R+QLA KE++IGRYY++R EY+AAI RF++V+ Y + EEA+ARLVEAY A Sbjct: 173 AKIRFARDQLAGKEMQIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYA 232 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 + ++DEA+ +++ YP W Sbjct: 233 MGIVDEAQTAAAVLGHNYPDSQW 255 >gi|86358441|ref|YP_470333.1| hypothetical protein RHE_CH02838 [Rhizobium etli CFN 42] gi|86282543|gb|ABC91606.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 289 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 83/203 (40%), Positives = 133/203 (65%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + + +K N ++A F+ R+ PF+ ARK+L+MS FV+Y GK A + G Sbjct: 53 LYTQGLANMKAGNMAEAARKFDAIDRENPFSEWARKALVMSTFVKYRQGKLDDALASGNR 112 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 Y++QYP+S++ YV YL+G++Y++ I DV DQRA+ ++ M +++ Y NS YV A+ Sbjct: 113 YMSQYPKSQDAAYVQYLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQ 172 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + R+QLA KE+++GRYY++R EY+AAI RF++V+ Y + EEA+ARLVEAY A Sbjct: 173 AKIRFARDQLAGKEMQVGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYA 232 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 + ++DEA+ +++ YP W Sbjct: 233 MGIVDEAQTAAAVLGHNYPDSQW 255 >gi|116253037|ref|YP_768875.1| competence lipoprotein ComL protein [Rhizobium leguminosarum bv. viciae 3841] gi|115257685|emb|CAK08783.1| putative competence lipoprotein ComL protein [Rhizobium leguminosarum bv. viciae 3841] Length = 289 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 83/203 (40%), Positives = 133/203 (65%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + + +K N ++A F+ R+ PF+ ARK+L+MS FV+Y G+ A + G Sbjct: 53 LYTQGLANMKAGNMAEAARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALASGNR 112 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 Y++QYP+S++ YV YL+G++Y++ I DV DQRA+ ++ M +++ Y NS YV A+ Sbjct: 113 YMSQYPKSQDAAYVQYLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQ 172 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + R+QLA KE++IGRYY++R EY+AAI RF++V+ Y + EEA+ARLVEAY A Sbjct: 173 AKIRFSRDQLAGKEMQIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYA 232 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 + ++DEA+ +++ YP W Sbjct: 233 MGIVDEAQTAAAVLGHNYPDSQW 255 >gi|218673357|ref|ZP_03523026.1| competence lipoprotein protein [Rhizobium etli GR56] Length = 248 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 85/203 (41%), Positives = 132/203 (65%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + + +K N ++A F+ R+ PF+ ARK+L+MS FV+Y G+ A + G Sbjct: 45 LYTQGLANMKAGNMAEAARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALASGNR 104 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 Y+ QYP+S++ YV YLVG++Y++ I DV DQRA+ ++ M +V+ Y NS YV A+ Sbjct: 105 YMAQYPKSQDAAYVQYLVGLTYSKQIVDVTQDQRASAKTIEAMQAVVDNYPNSEYVDDAQ 164 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + R+QLA KE++IGRYY++R EY+AAI RF++V+ Y + EEA+ARLVEAY A Sbjct: 165 AKIRYARDQLAGKEMQIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYA 224 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 + ++DEA+ +++ YP W Sbjct: 225 MGIVDEAQTAAAVLGHNYPDSQW 247 >gi|222086434|ref|YP_002544968.1| hypothetical protein Arad_2982 [Agrobacterium radiobacter K84] gi|221723882|gb|ACM27038.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 289 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 86/203 (42%), Positives = 129/203 (63%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + + +K N ++A F+ ++ PF+ ARK+L+MS FV+Y G+Y A G Sbjct: 53 LYNQGLANIKAGNMAEAGRKFDAINQQQPFSEWARKALVMSTFVKYRTGRYDDAVQSGNS 112 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 Y+ QYP S++ DYV YLVG SYA+ I V DQRA + ++ MS++V Y +S YV A+ Sbjct: 113 YLKQYPGSEDADYVQYLVGSSYAKQIVSVTQDQRAAQQTIEAMSKVVTNYPSSQYVSDAQ 172 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + R+QLA KE++IGRYYL+R +Y+AAI RF++V+ Y EEA+ARLVEAY A Sbjct: 173 AKIRFARDQLAGKEMQIGRYYLERKDYLAAISRFRIVIEQYPTTNQIEEALARLVEAYYA 232 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 + ++ EA+ +++ YP W Sbjct: 233 MGIVQEAQTAAAVLGHNYPDSRW 255 >gi|110634349|ref|YP_674557.1| putative lipoprotein [Mesorhizobium sp. BNC1] gi|110285333|gb|ABG63392.1| putative lipoprotein [Chelativorans sp. BNC1] Length = 288 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 132/212 (62%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + + L +A F R P++ ARK+L+M+AF Y GKY +A + G+ Sbjct: 53 LYNQGLANLNAGRMREAIAKFEAVDRQHPYSEFARKALIMNAFANYRQGKYTEAINAGKR 112 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 Y+T YP S++ Y YLVG+SY + I+DV DQR +L ++ M ++V+ + S YV A+ Sbjct: 113 YVTLYPTSEDAAYAQYLVGLSYFRQIKDVTQDQREARLTIEAMQQVVDVWPESEYVTDAQ 172 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + R+QLA KE+++GRYYL+R EY+AA+ RF+ V+ NY + H EEA+ARLVEAY+A Sbjct: 173 AKIRFARDQLAGKEMQVGRYYLERREYIAAVRRFRGVVENYGNTRHVEEALARLVEAYLA 232 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + + EA+ +++ +P W + TL++ Sbjct: 233 MGIASEAQTAAAVLGHNFPDSQWYKDSYTLLQ 264 >gi|254719454|ref|ZP_05181265.1| COML, competence lipoprotein [Brucella sp. 83/13] gi|265984459|ref|ZP_06097194.1| competence protein ComL [Brucella sp. 83/13] gi|306839231|ref|ZP_07472048.1| outer membrane assembly lipoprotein YfiO [Brucella sp. NF 2653] gi|306843231|ref|ZP_07475841.1| outer membrane assembly lipoprotein YfiO [Brucella sp. BO2] gi|306844321|ref|ZP_07476913.1| outer membrane assembly lipoprotein YfiO [Brucella sp. BO1] gi|264663051|gb|EEZ33312.1| competence protein ComL [Brucella sp. 83/13] gi|306275393|gb|EFM57134.1| outer membrane assembly lipoprotein YfiO [Brucella sp. BO1] gi|306286554|gb|EFM58133.1| outer membrane assembly lipoprotein YfiO [Brucella sp. BO2] gi|306405778|gb|EFM62040.1| outer membrane assembly lipoprotein YfiO [Brucella sp. NF 2653] Length = 287 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 90/241 (37%), Positives = 138/241 (57%), Gaps = 3/241 (1%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDS---VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 T S A+ L+ +S++ +D V + ++Y + + L +A + F Sbjct: 12 TALLSGAIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAKKFA 71 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 R P+ ARK+L+M+AF Y G Y++A S+ + Y T YP S Y YY++G+SY Sbjct: 72 AIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLSY 131 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + I DV DQ A++ + M +++R+ NS Y A+ + V R+QLA KE++IGRYYL Sbjct: 132 FRQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGRYYL 191 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +R EY+AAI RF+ V+ YS+ EEA+ARLVEAY AL L EA+ S++ + +P Sbjct: 192 ERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFPDSQ 251 Query: 262 W 262 W Sbjct: 252 W 252 >gi|148558858|ref|YP_001259314.1| putative competence protein ComL [Brucella ovis ATCC 25840] gi|148370115|gb|ABQ60094.1| putative competence protein ComL [Brucella ovis ATCC 25840] Length = 287 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 89/241 (36%), Positives = 136/241 (56%), Gaps = 3/241 (1%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDS---VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 T S + L+ +S++ +D V + ++Y + + L +A + F Sbjct: 12 TALLSGTIAVLIPLAGCASKNDDIDLTKYVETINPADKLYNEGLANLDAGRLDEAAKKFA 71 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 R P+ ARK+L+M+AF Y G Y++A S+ + Y T YP S Y YY++G+SY Sbjct: 72 AIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLSY 131 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 I DV DQ A++ + M +++R+ NS Y A+ + V R+QLA KE++IGRYYL Sbjct: 132 FHQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGRYYL 191 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +R EY+AAI RF+ V+ YS+ EEA+ARLVEAY AL L EA+ S++ + +P Sbjct: 192 ERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFPDSQ 251 Query: 262 W 262 W Sbjct: 252 W 252 >gi|239832301|ref|ZP_04680630.1| outer membrane assembly lipoprotein YfiO [Ochrobactrum intermedium LMG 3301] gi|239824568|gb|EEQ96136.1| outer membrane assembly lipoprotein YfiO [Ochrobactrum intermedium LMG 3301] Length = 287 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 90/241 (37%), Positives = 137/241 (56%), Gaps = 3/241 (1%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDS---VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 T + A+ L+ +S+D +D V + ++Y + + L +A + F Sbjct: 12 TALLTGAIAVLIPLAGCASKDDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAKKFA 71 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 R P+ ARKSL+M+AF Y G Y++A S+ + Y T YP S Y YY++G+SY Sbjct: 72 AVDRQHPYTEWARKSLVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLSY 131 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + I DV DQ A++ + M +V+R+ +S Y A+ + R+QLA KE+++GRYYL Sbjct: 132 FRQIPDVTRDQAASRRAIAAMQEVVDRFPDSEYTDDAKAKIRFARDQLAGKEMQVGRYYL 191 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +R EY+AAI RF+ V+ YS+ EEA+ARLVEAY AL L EA+ S++ + YP Sbjct: 192 ERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNYPDSQ 251 Query: 262 W 262 W Sbjct: 252 W 252 >gi|153009082|ref|YP_001370297.1| competence protein ComL [Ochrobactrum anthropi ATCC 49188] gi|151560970|gb|ABS14468.1| ComL, hypothetical competence protein [Ochrobactrum anthropi ATCC 49188] Length = 287 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 90/241 (37%), Positives = 136/241 (56%), Gaps = 3/241 (1%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDS---VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 T + A+ L+ +S+D +D V + + Y + + L +A + F Sbjct: 12 TALLTGAIAVLIPLAGCASKDDDIDLTKYVETIDPADKTYNEGLANLDAGRLDEAAKKFA 71 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 R P+ ARKSL+M+AF Y G Y++A S+ + Y T YP S Y YY++G+SY Sbjct: 72 AVDRQHPYTEWARKSLVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLSY 131 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + I DV DQ A++ + M +V+R+ +S Y AR + R+QLA KE+++GRYYL Sbjct: 132 FRQIPDVTRDQAASRRAIAAMQEVVDRFPDSEYTDDARAKIRFARDQLAGKEMQVGRYYL 191 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +R EY+A+I RF+ V+ YS+ EEA+ARLVEAY AL L EA+ S++ + YP Sbjct: 192 ERKEYLASIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNYPDSQ 251 Query: 262 W 262 W Sbjct: 252 W 252 >gi|23502293|ref|NP_698420.1| competence protein ComL [Brucella suis 1330] gi|62290315|ref|YP_222108.1| competence protein ComL [Brucella abortus bv. 1 str. 9-941] gi|82700239|ref|YP_414813.1| TPR repeat-containing protein [Brucella melitensis biovar Abortus 2308] gi|161619370|ref|YP_001593257.1| hypothetical protein BCAN_A1455 [Brucella canis ATCC 23365] gi|163843677|ref|YP_001628081.1| hypothetical protein BSUIS_A1473 [Brucella suis ATCC 23445] gi|189024549|ref|YP_001935317.1| TPR repeat-containing protein [Brucella abortus S19] gi|225852904|ref|YP_002733137.1| outer membrane assembly lipoprotein YfiO [Brucella melitensis ATCC 23457] gi|254689617|ref|ZP_05152871.1| COML, competence lipoprotein [Brucella abortus bv. 6 str. 870] gi|254694107|ref|ZP_05155935.1| COML, competence lipoprotein [Brucella abortus bv. 3 str. Tulya] gi|254697759|ref|ZP_05159587.1| COML, competence lipoprotein [Brucella abortus bv. 2 str. 86/8/59] gi|254702144|ref|ZP_05163972.1| COML, competence lipoprotein [Brucella suis bv. 5 str. 513] gi|254704680|ref|ZP_05166508.1| COML, competence lipoprotein [Brucella suis bv. 3 str. 686] gi|254708095|ref|ZP_05169923.1| COML, competence lipoprotein [Brucella pinnipedialis M163/99/10] gi|254710464|ref|ZP_05172275.1| COML, competence lipoprotein [Brucella pinnipedialis B2/94] gi|254714457|ref|ZP_05176268.1| COML, competence lipoprotein [Brucella ceti M644/93/1] gi|254717355|ref|ZP_05179166.1| COML, competence lipoprotein [Brucella ceti M13/05/1] gi|254730648|ref|ZP_05189226.1| COML, competence lipoprotein [Brucella abortus bv. 4 str. 292] gi|256031958|ref|ZP_05445572.1| COML, competence lipoprotein [Brucella pinnipedialis M292/94/1] gi|256045053|ref|ZP_05447954.1| COML, competence lipoprotein [Brucella melitensis bv. 1 str. Rev.1] gi|256061480|ref|ZP_05451624.1| COML, competence lipoprotein [Brucella neotomae 5K33] gi|256113976|ref|ZP_05454759.1| COML, competence lipoprotein [Brucella melitensis bv. 3 str. Ether] gi|256160157|ref|ZP_05457851.1| COML, competence lipoprotein [Brucella ceti M490/95/1] gi|256255363|ref|ZP_05460899.1| COML, competence lipoprotein [Brucella ceti B1/94] gi|256263614|ref|ZP_05466146.1| TPR repeat-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|256369838|ref|YP_003107349.1| competence protein ComL [Brucella microti CCM 4915] gi|260169095|ref|ZP_05755906.1| COML, competence lipoprotein [Brucella sp. F5/99] gi|260546858|ref|ZP_05822597.1| TPR repeat-containing protein [Brucella abortus NCTC 8038] gi|260565348|ref|ZP_05835832.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M] gi|260566072|ref|ZP_05836542.1| TPR repeat-containing protein [Brucella suis bv. 4 str. 40] gi|260755144|ref|ZP_05867492.1| competence protein ComL [Brucella abortus bv. 6 str. 870] gi|260758363|ref|ZP_05870711.1| competence protein ComL [Brucella abortus bv. 4 str. 292] gi|260762189|ref|ZP_05874532.1| competence protein ComL [Brucella abortus bv. 2 str. 86/8/59] gi|261214405|ref|ZP_05928686.1| competence protein ComL [Brucella abortus bv. 3 str. Tulya] gi|261219185|ref|ZP_05933466.1| competence protein ComL [Brucella ceti M13/05/1] gi|261222564|ref|ZP_05936845.1| competence protein ComL [Brucella ceti B1/94] gi|261315597|ref|ZP_05954794.1| competence protein ComL [Brucella pinnipedialis M163/99/10] gi|261318035|ref|ZP_05957232.1| competence protein ComL [Brucella pinnipedialis B2/94] gi|261322246|ref|ZP_05961443.1| competence protein ComL [Brucella ceti M644/93/1] gi|261325486|ref|ZP_05964683.1| competence protein ComL [Brucella neotomae 5K33] gi|261752713|ref|ZP_05996422.1| competence protein ComL [Brucella suis bv. 5 str. 513] gi|261755373|ref|ZP_05999082.1| competence protein ComL [Brucella suis bv. 3 str. 686] gi|261758600|ref|ZP_06002309.1| TPR repeat-containing protein [Brucella sp. F5/99] gi|265989066|ref|ZP_06101623.1| competence protein ComL [Brucella pinnipedialis M292/94/1] gi|265991479|ref|ZP_06104036.1| competence protein ComL [Brucella melitensis bv. 1 str. Rev.1] gi|265995317|ref|ZP_06107874.1| competence protein ComL [Brucella melitensis bv. 3 str. Ether] gi|265998529|ref|ZP_06111086.1| competence protein ComL [Brucella ceti M490/95/1] gi|294852749|ref|ZP_06793422.1| UPF0169 lipoprotein [Brucella sp. NVSL 07-0026] gi|297248702|ref|ZP_06932420.1| lipoprotein [Brucella abortus bv. 5 str. B3196] gi|23348269|gb|AAN30335.1| competence protein ComL, putative [Brucella suis 1330] gi|62196447|gb|AAX74747.1| ComL, hypothetical competence protein [Brucella abortus bv. 1 str. 9-941] gi|82616340|emb|CAJ11397.1| TPR repeat:Protein of unknown function UPF0169 [Brucella melitensis biovar Abortus 2308] gi|161336181|gb|ABX62486.1| Hypothetical protein BCAN_A1455 [Brucella canis ATCC 23365] gi|163674400|gb|ABY38511.1| Hypothetical protein BSUIS_A1473 [Brucella suis ATCC 23445] gi|189020121|gb|ACD72843.1| TPR repeat-containing protein [Brucella abortus S19] gi|225641269|gb|ACO01183.1| outer membrane assembly lipoprotein YfiO [Brucella melitensis ATCC 23457] gi|256000001|gb|ACU48400.1| competence protein ComL [Brucella microti CCM 4915] gi|260095908|gb|EEW79785.1| TPR repeat-containing protein [Brucella abortus NCTC 8038] gi|260151416|gb|EEW86510.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M] gi|260155590|gb|EEW90670.1| TPR repeat-containing protein [Brucella suis bv. 4 str. 40] gi|260668681|gb|EEX55621.1| competence protein ComL [Brucella abortus bv. 4 str. 292] gi|260672621|gb|EEX59442.1| competence protein ComL [Brucella abortus bv. 2 str. 86/8/59] gi|260675252|gb|EEX62073.1| competence protein ComL [Brucella abortus bv. 6 str. 870] gi|260916012|gb|EEX82873.1| competence protein ComL [Brucella abortus bv. 3 str. Tulya] gi|260921148|gb|EEX87801.1| competence protein ComL [Brucella ceti B1/94] gi|260924274|gb|EEX90842.1| competence protein ComL [Brucella ceti M13/05/1] gi|261294936|gb|EEX98432.1| competence protein ComL [Brucella ceti M644/93/1] gi|261297258|gb|EEY00755.1| competence protein ComL [Brucella pinnipedialis B2/94] gi|261301466|gb|EEY04963.1| competence protein ComL [Brucella neotomae 5K33] gi|261304623|gb|EEY08120.1| competence protein ComL [Brucella pinnipedialis M163/99/10] gi|261738584|gb|EEY26580.1| TPR repeat-containing protein [Brucella sp. F5/99] gi|261742466|gb|EEY30392.1| competence protein ComL [Brucella suis bv. 5 str. 513] gi|261745126|gb|EEY33052.1| competence protein ComL [Brucella suis bv. 3 str. 686] gi|262553153|gb|EEZ08987.1| competence protein ComL [Brucella ceti M490/95/1] gi|262766430|gb|EEZ12219.1| competence protein ComL [Brucella melitensis bv. 3 str. Ether] gi|263002263|gb|EEZ14838.1| competence protein ComL [Brucella melitensis bv. 1 str. Rev.1] gi|263093666|gb|EEZ17671.1| TPR repeat-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|264661263|gb|EEZ31524.1| competence protein ComL [Brucella pinnipedialis M292/94/1] gi|294821338|gb|EFG38337.1| UPF0169 lipoprotein [Brucella sp. NVSL 07-0026] gi|297175871|gb|EFH35218.1| lipoprotein [Brucella abortus bv. 5 str. B3196] gi|326409446|gb|ADZ66511.1| TPR repeat-containing protein [Brucella melitensis M28] gi|326539152|gb|ADZ87367.1| outer membrane assembly lipoprotein YfiO [Brucella melitensis M5-90] Length = 287 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 89/241 (36%), Positives = 137/241 (56%), Gaps = 3/241 (1%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDS---VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 T S + L+ +S++ +D V + ++Y + + L +A + F Sbjct: 12 TALLSGTIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAKKFA 71 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 R P+ ARK+L+M+AF Y G Y++A S+ + Y T YP S Y YY++G+SY Sbjct: 72 AIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLSY 131 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + I DV DQ A++ + M +++R+ NS Y A+ + V R+QLA KE++IGRYYL Sbjct: 132 FRQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGRYYL 191 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +R EY+AAI RF+ V+ YS+ EEA+ARLVEAY AL L EA+ S++ + +P Sbjct: 192 ERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFPDSQ 251 Query: 262 W 262 W Sbjct: 252 W 252 >gi|17986870|ref|NP_539504.1| COML, competence lipoprotein [Brucella melitensis bv. 1 str. 16M] gi|17982509|gb|AAL51768.1| coml, competence lipoprotein [Brucella melitensis bv. 1 str. 16M] Length = 309 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 89/241 (36%), Positives = 137/241 (56%), Gaps = 3/241 (1%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDS---VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 T S + L+ +S++ +D V + ++Y + + L +A + F Sbjct: 34 TALLSGTIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAKKFA 93 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 R P+ ARK+L+M+AF Y G Y++A S+ + Y T YP S Y YY++G+SY Sbjct: 94 AIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLSY 153 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + I DV DQ A++ + M +++R+ NS Y A+ + V R+QLA KE++IGRYYL Sbjct: 154 FRQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGRYYL 213 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +R EY+AAI RF+ V+ YS+ EEA+ARLVEAY AL L EA+ S++ + +P Sbjct: 214 ERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFPDSQ 273 Query: 262 W 262 W Sbjct: 274 W 274 >gi|225627872|ref|ZP_03785909.1| outer membrane assembly lipoprotein YfiO [Brucella ceti str. Cudo] gi|237815822|ref|ZP_04594819.1| outer membrane assembly lipoprotein YfiO [Brucella abortus str. 2308 A] gi|225617877|gb|EEH14922.1| outer membrane assembly lipoprotein YfiO [Brucella ceti str. Cudo] gi|237789120|gb|EEP63331.1| outer membrane assembly lipoprotein YfiO [Brucella abortus str. 2308 A] Length = 323 Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 89/241 (36%), Positives = 137/241 (56%), Gaps = 3/241 (1%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDS---VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 T S + L+ +S++ +D V + ++Y + + L +A + F Sbjct: 48 TALLSGTIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAKKFA 107 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 R P+ ARK+L+M+AF Y G Y++A S+ + Y T YP S Y YY++G+SY Sbjct: 108 AIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLSY 167 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + I DV DQ A++ + M +++R+ NS Y A+ + V R+QLA KE++IGRYYL Sbjct: 168 FRQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGRYYL 227 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +R EY+AAI RF+ V+ YS+ EEA+ARLVEAY AL L EA+ S++ + +P Sbjct: 228 ERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFPDSQ 287 Query: 262 W 262 W Sbjct: 288 W 288 >gi|260462098|ref|ZP_05810342.1| outer membrane assembly lipoprotein YfiO [Mesorhizobium opportunistum WSM2075] gi|259031958|gb|EEW33225.1| outer membrane assembly lipoprotein YfiO [Mesorhizobium opportunistum WSM2075] Length = 362 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 83/222 (37%), Positives = 128/222 (57%), Gaps = 1/222 (0%) Query: 42 SSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 S +D+ L + D +V Y + + L +A + F+ R P++ ARKS++M Sbjct: 108 SEKDIDLSTYVDQTEPADVLYNQGLANLNAGRLDEASKKFDAVDRQHPYSEWARKSMVMG 167 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 AF Y G Y +A S + Y+ YP + + Y Y++G+SY + I+DV DQ+ + LQ Sbjct: 168 AFADYRKGSYDEAISSAKRYLALYPSTDDAPYAQYIIGLSYYRQIKDVTQDQKEARQTLQ 227 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 M +V R+ S YV A+ + +QLA KE++IGRYYL+R EY+AA+ RF+ V+ NY Sbjct: 228 TMQDLVTRWPTSEYVDDAKEKIRFANDQLAGKEMQIGRYYLERREYIAAVKRFRTVVENY 287 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 S+ H EEA+ARL E+Y A+ L EA+ +++ YP W Sbjct: 288 SNTRHVEEALARLTESYYAMGLTSEAQTAAAVLGTNYPDSPW 329 >gi|13471541|ref|NP_103107.1| hypothetical protein mll1543 [Mesorhizobium loti MAFF303099] gi|18202649|sp|Q98KC1|Y1543_RHILO RecName: Full=UPF0169 lipoprotein Mll1543; Flags: Precursor gi|14022283|dbj|BAB48893.1| mll1543 [Mesorhizobium loti MAFF303099] Length = 289 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 83/222 (37%), Positives = 127/222 (57%), Gaps = 1/222 (0%) Query: 42 SSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 S +D+ L D +V Y + + L +A + F+ R P++ ARKS++M Sbjct: 35 SEKDIDLSKYVDQTEPADVLYNQGLANLNAGRLDEASKKFDAVDRQHPYSEWARKSMVMG 94 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 AF Y G Y +A S + Y+ YP + + Y Y++G+SY + I+DV DQ+ + LQ Sbjct: 95 AFADYRKGSYDEAISSAKRYLALYPSTDDAPYAQYIIGLSYYRQIKDVTQDQKEARQTLQ 154 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 M +V R+ S YV A+ + +QLA KE++IGRYYL+R EY+AA+ RF+ V+ NY Sbjct: 155 TMQDLVTRWPTSEYVDDAKEKIRFANDQLAGKEMQIGRYYLERREYIAAVKRFRTVVENY 214 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 S+ H EEA+ARL E+Y A+ L EA+ +++ YP W Sbjct: 215 SNTRHVEEALARLTESYYAMGLTSEAQTAAAVLGTNYPDSPW 256 >gi|319782856|ref|YP_004142332.1| outer membrane assembly lipoprotein YfiO [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168744|gb|ADV12282.1| outer membrane assembly lipoprotein YfiO [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 289 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 82/222 (36%), Positives = 127/222 (57%), Gaps = 1/222 (0%) Query: 42 SSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 S +D+ L + D +V Y + + L +A F+ R P++ ARKS++M Sbjct: 35 SEKDIDLSTYVDQTEPADVLYNQGLANLNAGRLQEASRKFDAVDRQHPYSEWARKSMVMG 94 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 AF Y G Y +A + Y+T YP + + Y Y++G+SY + I+DV DQ+ + +Q Sbjct: 95 AFADYRQGNYDEAIGSAKRYLTLYPSTDDAAYAQYIIGLSYYRQIKDVTQDQKEARQTVQ 154 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 M +V R+ S YV A+ + +QLA KE++IGRYYL+R EY+AA+ RF+ V+ NY Sbjct: 155 TMQDLVTRWPTSEYVDDAKEKIRFANDQLAGKEMQIGRYYLERREYIAAVKRFRTVVENY 214 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 S+ H EEA+ARL E+Y A+ L EA+ +++ YP W Sbjct: 215 SNTRHVEEALARLTESYYAMGLTSEAQTAAAVLGTNYPDSSW 256 >gi|323137883|ref|ZP_08072958.1| outer membrane assembly lipoprotein YfiO [Methylocystis sp. ATCC 49242] gi|322396886|gb|EFX99412.1| outer membrane assembly lipoprotein YfiO [Methylocystis sp. ATCC 49242] Length = 302 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 77/213 (36%), Positives = 126/213 (59%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y + + LK++++ A + F + +P + +RK+LLM+ F Q+ G Y ++ + Sbjct: 66 DLYNQGLAKLKKKDYEGAAKKFGDLEKQYPSSEWSRKALLMTTFAQFQKGAYDESVQSAQ 125 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 YI YP S + YVYYL GMS+ + DV DQ+ + L+ ++++++Y S YV A Sbjct: 126 RYIGLYPNSADTPYVYYLAGMSFYNQVPDVMRDQQPAEKALEVFTQLIQKYPKSEYVTDA 185 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 R+ + V R+QLAAKE+ +GR+YL R Y AAI RF VL Y H EEA+ RL EAY+ Sbjct: 186 RYKIQVTRDQLAAKEMNVGRFYLTRKNYPAAINRFHDVLGKYQTTRHTEEALYRLTEAYM 245 Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 A+ + +EA+ +++ +P W + L+K Sbjct: 246 AMGVTNEAQTAAAILGHNFPDSQWYKDAHALLK 278 >gi|222149127|ref|YP_002550084.1| hypothetical protein Avi_2880 [Agrobacterium vitis S4] gi|221736112|gb|ACM37075.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 289 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 80/203 (39%), Positives = 126/203 (62%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + + +K N ++A F+ + PF+ ++K+L+MS FV+Y GKY +A S G Sbjct: 53 LYNQGLANIKAGNLAEASRKFDAVDKQNPFSDWSQKALVMSTFVKYRQGKYTEAISTGTR 112 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 Y+T YP +K+ YV YL+G+S + I +V DQ+ + L+ M ++V+ Y S YV A+ Sbjct: 113 YMTLYPSTKDSAYVQYLIGLSNWRQIPNVTQDQKFSSRTLEAMDKVVKNYPTSEYVSDAQ 172 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + R+QLA KE++IGRYYL+R EY+A+I RF+ V+ Y EEA+ARLVEAY A Sbjct: 173 EKMRFARDQLAGKEMQIGRYYLERKEYLASIQRFRNVVEQYPTTNQIEEALARLVEAYYA 232 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 + ++ EA+ +++ YP W Sbjct: 233 MGVVQEAQTAAAVLGHNYPDSKW 255 >gi|83858907|ref|ZP_00952429.1| competence lipoprotein ComL, putative [Oceanicaulis alexandrii HTCC2633] gi|83853730|gb|EAP91582.1| competence lipoprotein ComL, putative [Oceanicaulis alexandrii HTCC2633] Length = 277 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 76/203 (37%), Positives = 127/203 (62%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A ++ + + +A YF++ R PF+ AR+S+LM+A+ Y KY +A S + Sbjct: 38 LYAEAFDKMQRRRYDEAAAYFDEVERQHPFSEWARRSMLMAAYANYRQSKYDEAISDAQR 97 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I +P + + Y YYL+ +SY + I DV DQ T+ LQ + ++V RY ++PY + AR Sbjct: 98 FIALHPGNASAPYAYYLIALSYYERIYDVGRDQSTTQQALQALEQVVRRYPDTPYAQDAR 157 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + R+ LA KE+ +GR+YL+ G ++AAI RFQ V+ +Y H EA+ RLVEAYV+ Sbjct: 158 LKIDMTRDHLAGKEMSVGRWYLRNGYHLAAINRFQNVIRDYETTSHTPEALHRLVEAYVS 217 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 L + +EAR++ +++ +P W Sbjct: 218 LGVDEEARQIAAVLGYNFPGSEW 240 >gi|319408816|emb|CBI82473.1| competence lipoprotein precursor [Bartonella schoenbuchensis R1] Length = 292 Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 84/212 (39%), Positives = 125/212 (58%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A+ L F +A + F+ + + + RKSL+M AFV Y KY A S+ + Sbjct: 55 LYNQALTNLDLGRFDEALKKFSIIEKQYAYTEWGRKSLVMGAFVSYRLAKYDDAISMAQR 114 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 YIT YP + + Y YY+VG+S IRDV DQR TK + M ++ERY NS YVK A+ Sbjct: 115 YITLYPNASDSAYAYYIVGLSSFHQIRDVTRDQRDTKRAIAAMQLLIERYPNSEYVKDAK 174 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + GR QLA KE+++GRYY + +Y+AA RF+ V+ YSD EEA+ RL E +A Sbjct: 175 DKIRFGREQLAGKEMQVGRYYEEGRQYLAASRRFRTVVEEYSDTNQIEEALFRLTEVNLA 234 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271 L L+ EA+ +++ YP+ W ++ L++ Sbjct: 235 LGLITEAQTAAAVLGRNYPESKWYKFSYDLLQ 266 >gi|159185041|ref|NP_355049.2| hypothetical protein Atu2084 [Agrobacterium tumefaciens str. C58] gi|159140315|gb|AAK87834.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 288 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 124/203 (61%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y++ + + N ++A F + +PF +K+L+M F+ K A + G Sbjct: 53 LYKQGLANMNAGNMTEASRKFEAIDKQYPFTEWGQKALVMQTFIATRTNKNDVAITSGSR 112 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 ++ QYP SK+ YV Y++G++Y++ I DV DQRA + ++ M+++V Y +S YV A+ Sbjct: 113 FLRQYPRSKDAAYVQYMIGLAYSKQISDVTQDQRAAQRTIEAMNKVVNDYPSSEYVADAQ 172 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + R+QLA +E+++GRYYL+R EY+AA+ RF++V+ Y + EEA+ARL EAY A Sbjct: 173 AKIRFARDQLAGREMQVGRYYLERKEYLAAVSRFRIVVEQYQNTNQIEEALARLTEAYYA 232 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 + L+DEA+ +++ YP W Sbjct: 233 MGLVDEAQTAAAVLGNNYPDSQW 255 >gi|325293455|ref|YP_004279319.1| lipoprotein [Agrobacterium sp. H13-3] gi|325061308|gb|ADY64999.1| lipoprotein [Agrobacterium sp. H13-3] Length = 288 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 123/203 (60%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y++ + + N ++A F + +PF +K+L+M F+ K A + G Sbjct: 53 LYKQGLANMNAGNMTEASRKFEAIDKQYPFTEWGQKALVMQTFIATRTNKNDVAIASGSR 112 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 ++ QYP SK+ YV Y++G++Y++ I DV DQRA + ++ MS++V Y +S YV A+ Sbjct: 113 FLRQYPRSKDAAYVQYMIGLAYSKQISDVTQDQRAAQRTVEAMSKVVNDYPDSEYVADAQ 172 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + R+QLA +E+++GRYYL+R EY+AA+ RF++V+ Y + EEA+ARL E+Y A Sbjct: 173 AKIRFARDQLAGREMQVGRYYLERKEYLAAVSRFRIVVEQYQNTNQIEEALARLTESYYA 232 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 + L DEA+ +++ YP W Sbjct: 233 MGLSDEAQTAAAVLGNNYPDSQW 255 >gi|296445566|ref|ZP_06887522.1| outer membrane assembly lipoprotein YfiO [Methylosinus trichosporium OB3b] gi|296256971|gb|EFH04042.1| outer membrane assembly lipoprotein YfiO [Methylosinus trichosporium OB3b] Length = 292 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 122/212 (57%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A+ L+ +++ A + F + + +PF+ ARK LLM F QYS Y A + + Sbjct: 56 DIYNQALAKLEAKDYETAAKKFGELEKQYPFSHWARKGLLMQTFAQYSKPSYDDAVASAQ 115 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 YI YP S Y+YYL GMSY + V DQ + L +++VE++ S YV Sbjct: 116 RYIGLYPTSPETPYMYYLAGMSYYNQVPGVMQDQETAQKALVIFNQLVEKFPKSEYVADV 175 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 ++ + V R+QLAAK++ +GR+YL R Y AA+ RF VLA Y HAEEA+ RL EAY Sbjct: 176 KYKIQVARDQLAAKDMSVGRFYLTRKNYPAAVNRFHDVLAKYQTTRHAEEALYRLTEAYF 235 Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLV 270 A+ +++EA+ +++ +P W + L+ Sbjct: 236 AMGIVNEAQTAAAILGHNFPDSQWYKDAHELL 267 >gi|217979600|ref|YP_002363747.1| outer membrane assembly lipoprotein YfiO [Methylocella silvestris BL2] gi|217504976|gb|ACK52385.1| outer membrane assembly lipoprotein YfiO [Methylocella silvestris BL2] Length = 288 Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 80/220 (36%), Positives = 125/220 (56%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S D Y + ++Y + + LK +++ A + F + +P++ RK L+M+ F Sbjct: 36 SGDKYKPEILKDTPAEDLYNQGLARLKVRDYPAAAKSFAALDKQYPYSQWQRKGLIMTTF 95 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 QY AG Y+ A + YI +P++ +VDY YYL MSY I D+ DQ + Sbjct: 96 AQYQAGSYEDAIGSAKRYIGLFPQAADVDYAYYLEAMSYYNQIPDISRDQDRSAKAADLF 155 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 ++I+E+Y S YV +R+ + V R+QLA KE+ +GR+YL + YVAA+ RF+ VLA Y Sbjct: 156 AQIIEKYPKSEYVDDSRYKLQVTRDQLAGKEMMVGRFYLNQRNYVAAVGRFREVLAKYQT 215 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 HAEEA+ RL EAY+AL + EA+ +++ +P W Sbjct: 216 TRHAEEALMRLTEAYLALGVPQEAQTAAAILGHNFPDSVW 255 >gi|90418186|ref|ZP_01226098.1| putative competence lipoprotein comL [Aurantimonas manganoxydans SI85-9A1] gi|90337858|gb|EAS51509.1| putative competence lipoprotein comL [Aurantimonas manganoxydans SI85-9A1] Length = 293 Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 87/245 (35%), Positives = 132/245 (53%), Gaps = 1/245 (0%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDV-YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 K + +A L G + DV L + +Y + + L+ +A + Sbjct: 17 KLTGALALGLASAGLSGCMSSDTSDVEALALAAETDPPDVLYNQGLANLEGGRLGEATKK 76 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F R P++ ARK+L+MSAF Y G Y A + + Y++ YP S+ Y Y++G+ Sbjct: 77 FEAIDRQHPYSEWARKALVMSAFASYRGGDYDTAINSSKRYLSLYPGSEEAAYAQYIMGL 136 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 +Y + I DV DQ+ M + E+Y +S Y AR + + R+QLA KE+++GRY Sbjct: 137 AYYRQIPDVTRDQKEAARAAAAMREVFEKYPDSEYADDARAKLRIARDQLAGKEMQVGRY 196 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YL+R EYVAAI RF+ V+ YSD+ H EEA+ARL EAY A+ L EA+ S++ + +P Sbjct: 197 YLERREYVAAINRFKNVVDVYSDSRHVEEALARLTEAYYAMGLTREAQAAASVLGQNFPD 256 Query: 260 GYWAR 264 W R Sbjct: 257 SQWYR 261 >gi|114705261|ref|ZP_01438169.1| hypothetical protein FP2506_09991 [Fulvimarina pelagi HTCC2506] gi|114540046|gb|EAU43166.1| hypothetical protein FP2506_09991 [Fulvimarina pelagi HTCC2506] Length = 265 Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 83/245 (33%), Positives = 136/245 (55%), Gaps = 1/245 (0%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAY 77 + K +LT+ + G DV + ++ + EV Y + + L+ N +A Sbjct: 9 MRKASLTVLVAATAGLASGCMSDGGSDVDVLALAAQTERPEVLYNQGLANLEGGNLGEAS 68 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 F R P+ ARK+L+M AF Y +G Y++A + + Y++ YP +++ Y Y++ Sbjct: 69 AKFKAIDRQHPYTDWARKALVMGAFTSYRSGAYEEAINSSKRYLSLYPGTEDAAYAQYIM 128 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 G+SY + I D+ DQ A Q M +++ Y +S YV A+ + + R+QLA KE+++G Sbjct: 129 GLSYWRQIPDITRDQTAAGRTAQAMRGVIDNYPDSEYVPDAQTKLRIARDQLAGKELQVG 188 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 RYY +R EYVAAI RF+ V+ Y + EEA+ARL E Y+A+ L+ EA+ S++ + Y Sbjct: 189 RYYQERNEYVAAINRFKNVVDVYPETRQVEEALARLTETYLAMGLVREAQASASVLGQNY 248 Query: 258 PQGYW 262 P W Sbjct: 249 PDSQW 253 >gi|114570618|ref|YP_757298.1| DNA uptake lipoprotein-like protein [Maricaulis maris MCS10] gi|114341080|gb|ABI66360.1| DNA uptake lipoprotein-like protein [Maricaulis maris MCS10] Length = 276 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 76/203 (37%), Positives = 124/203 (61%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y A L Q + A F++ R P++ AR+++LM+A+ Y + Y +A S + Sbjct: 38 IYATAFESLDRQQYPLAAARFDEVERQHPYSEWARRAMLMAAYANYESNNYDEAISDAQR 97 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I+ +P ++N Y YYL+ +S+ + I DV DQ AT+ L + ++V R+ +S Y AR Sbjct: 98 FISLHPGNRNAAYAYYLIAISHFEQIMDVGRDQAATQQALLSLEQVVRRFPDSRYATDAR 157 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + R+ LA KE+ +GR+YL+RG ++AAI RFQ VL Y + H EA+ RLVE+YV+ Sbjct: 158 LKIDMTRDHLAGKEMSVGRWYLRRGYHLAAINRFQNVLREYGNTSHVPEALHRLVESYVS 217 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 L + +EAR+V S++ +P W Sbjct: 218 LGIDEEARQVASVLGYNFPGSDW 240 >gi|240850884|ref|YP_002972284.1| competence lipoprotein ComL precursor [Bartonella grahamii as4aup] gi|240268007|gb|ACS51595.1| competence lipoprotein ComL precursor [Bartonella grahamii as4aup] Length = 297 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 82/212 (38%), Positives = 122/212 (57%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A+ L+ A + F + + + + RKSL+M AF Y GKY + S+ + Sbjct: 60 LYNQALASLESGKLGDASKKFLKIEKQYAYTDWGRKSLVMGAFTNYRLGKYDDSISMAQR 119 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 YIT YP S + Y YY++G+S + I DV DQR TK + M ++ERY NS YVK A+ Sbjct: 120 YITLYPGSTDSAYAYYIIGLSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPNSEYVKDAK 179 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + GR QLA KE++IGRYY + Y+AA RF+ V+ YSD EEA+ RL E +A Sbjct: 180 DKIRFGREQLAGKEMQIGRYYEEGRRYLAASRRFRTVVEEYSDTNQIEEALFRLTEVNLA 239 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271 L L EA+ +++ YP+ W ++ L++ Sbjct: 240 LGLTAEAQTAAAILGRNYPKSEWYKFSYNLLQ 271 >gi|163868705|ref|YP_001609917.1| competence lipoprotein precursor [Bartonella tribocorum CIP 105476] gi|161018364|emb|CAK01922.1| competence lipoprotein precursor [Bartonella tribocorum CIP 105476] Length = 297 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 82/212 (38%), Positives = 122/212 (57%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + + L+ + A + F + + + + RKSL+M AF Y GKY + S+ + Sbjct: 60 LYNQGLASLESGRLADAAKKFLKIEKQYAYTDWGRKSLVMGAFTNYRLGKYDDSISMAQR 119 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 YIT YP S + Y YY++G+S + I DV DQR TK + M ++ERY NS YVK A+ Sbjct: 120 YITLYPGSTDSAYAYYIIGLSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPNSEYVKDAK 179 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + GR QLA KE++IGRYY + Y+AA RF+ V+ YSD EEA+ RL E +A Sbjct: 180 DKIRFGREQLAGKEMQIGRYYEEGRRYLAASRRFRTVVEEYSDTNQIEEALFRLTEVNLA 239 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271 L L EA+ +++ YPQ W ++ L++ Sbjct: 240 LGLTAEAQTAAAILGRNYPQSEWYKFSYNLLQ 271 >gi|227822643|ref|YP_002826615.1| competence lipoprotein ComL [Sinorhizobium fredii NGR234] gi|227341644|gb|ACP25862.1| competence lipoprotein ComL [Sinorhizobium fredii NGR234] Length = 288 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 80/223 (35%), Positives = 131/223 (58%), Gaps = 1/223 (0%) Query: 41 QSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 Q+ D+ + +T EV Y + + L ++A F+ R PF+ ARK+L+M Sbjct: 33 QNDPDIDITKLTAETDPPEVLYNQGLANLNAGKTTEAGRKFDAIDRQHPFSEYARKALVM 92 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 +AFV Y G+YQ A + Y+ YP+S++ Y Y+ G++Y + I V DQ+ + + Sbjct: 93 NAFVAYRNGQYQDAINSTNRYLNLYPQSEDAAYAQYIQGLAYTKQIPSVTQDQKPAQRAI 152 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 + M +V++Y +S YV A+ + R+QLA KE+++GRYYL+R EY+AAI RF++V+ Sbjct: 153 EAMQVVVDKYPDSEYVDDAQSKIRFARDQLAGKEMQVGRYYLERKEYLAAISRFRVVVEQ 212 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 Y + EEA+ARLVEAY ++ + EA+ +++ YP W Sbjct: 213 YPNTNQVEEALARLVEAYFSMGVTAEAQTAAAVLGHNYPDSQW 255 >gi|158426191|ref|YP_001527483.1| putative lipoprotein precursor [Azorhizobium caulinodans ORS 571] gi|158333080|dbj|BAF90565.1| putative lipoprotein precursor [Azorhizobium caulinodans ORS 571] Length = 284 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 118/204 (57%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y + + L + + A + F + P++ ARK+LLM +V Y AGKY A S G+ Sbjct: 48 KIYNEGLTLLNKGDLDGAAKRFEDIDKTHPYSEWARKALLMDTYVYYEAGKYDDAISAGK 107 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 Y+ +P S++ YV YLV S I D+ DQR T+ L + ++ +Y N+ Y GA Sbjct: 108 RYLALHPGSQDAPYVSYLVASSLYDSIPDISRDQRRTRQALDALDDVIRKYPNTEYAAGA 167 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + V V R+QLA KE+ IGRYYL++ Y AI RF++V+ Y EEA+ R+ EAY+ Sbjct: 168 KRKVEVARDQLAGKEMLIGRYYLEQRNYTGAINRFKVVITQYQTTRQTEEALFRITEAYM 227 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 AL +++EA+ +++ YP W Sbjct: 228 ALGIVNEAQTAAAVLGYNYPDSQW 251 >gi|154252872|ref|YP_001413696.1| DNA uptake lipoprotein [Parvibaculum lavamentivorans DS-1] gi|154156822|gb|ABS64039.1| DNA uptake lipoprotein [Parvibaculum lavamentivorans DS-1] Length = 291 Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 123/204 (60%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y KA+ + ++ A + F++ R P++ AR+S+LMSA+ Y +Y +A + Sbjct: 57 QIYNKAMDHMAAGDYIPAAKEFDEVERQHPYSEWARRSMLMSAYAHYKINEYDEAILSAQ 116 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +I+ +P +K+V Y YYL+G+SY + I DV DQ+ T+ L + +R+ +S Y + A Sbjct: 117 RFISLHPSNKDVPYAYYLIGLSYYERISDVGRDQKMTENALNSFYELTQRFPSSEYSRDA 176 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 R + + + LA KE+EIGRYYL R +YVAAI RF++V+ Y H EA+ RL EAY+ Sbjct: 177 RLKIDLTLDHLAGKEMEIGRYYLIRRDYVAAINRFRVVIEKYQTTTHTPEALERLTEAYL 236 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 AL + EA+ +++ YP W Sbjct: 237 ALGVKTEAQTAAAILGYNYPGSDW 260 >gi|146342490|ref|YP_001207538.1| TPR repeat-containing protein [Bradyrhizobium sp. ORS278] gi|146195296|emb|CAL79321.1| Conserved hypothetical protein; Putative Lipoprotein with tetratricopeptide repeat (TPR) domain [Bradyrhizobium sp. ORS278] Length = 297 Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 80/248 (32%), Positives = 132/248 (53%), Gaps = 6/248 (2%) Query: 26 IFFSIAVCFLVG-WER-QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 + F +A C G W++ + D ++D D Y +Y + ++++ A + F + Sbjct: 30 LAFPLAGCGTGGLWDKFLAKDDTFVDEPADKLYNEGLY----MLNEKKDMKGANKKFEEV 85 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 R P++ ARKSLLMSA+ Y AG Y Y+T +P S + Y YL+ S+ Sbjct: 86 DRQHPYSDWARKSLLMSAYASYQAGDYDGCIGSATRYVTLHPGSPDAAYAQYLIAASHYD 145 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 I D+ DQ T+ + + +V +Y NS Y A+ + R+QLA KE+++GRYY+++ Sbjct: 146 QIPDISRDQGRTEKAIAALEEVVRKYPNSEYATNAKAKMEGARDQLAGKEMDVGRYYMQK 205 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 +Y AAI RF+ V+ Y H EEA+ RL EAY+ + ++ EA+ +++ +P W Sbjct: 206 RDYTAAINRFKTVVTQYQTTRHVEEALFRLTEAYMTIGIVGEAQTAAAVLGHNFPDSKWY 265 Query: 264 RYVETLVK 271 + LVK Sbjct: 266 KDAYNLVK 273 >gi|150397273|ref|YP_001327740.1| hypothetical protein Smed_2072 [Sinorhizobium medicae WSM419] gi|150028788|gb|ABR60905.1| conserved hypothetical transmembrane protein [Sinorhizobium medicae WSM419] Length = 288 Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 81/223 (36%), Positives = 127/223 (56%), Gaps = 1/223 (0%) Query: 41 QSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 Q+ D+ + +T EV Y + + L ++A F + PF+ ARK+L+M Sbjct: 33 QNDPDIDITKLTAETDPPEVLYNQGLANLNAGKTTEAARKFEAIDKQHPFSEYARKALVM 92 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 +AFV Y G+YQ A + Y+ YP+S++ Y Y+ G++Y + I V DQR + Sbjct: 93 NAFVSYRNGQYQDAINSTNRYLNLYPQSEDAAYAQYIQGLAYTKQIPSVTQDQRPAMRAM 152 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 + M +V++Y +S YV A+ + R+QLA KE+++GRYYL+R EY+AAI RF+ V+ Sbjct: 153 EAMQVVVDKYPDSEYVDDAQAKIRFARDQLAGKEMQVGRYYLERKEYLAAISRFRTVVER 212 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 Y EEA+ARLVEAY A+ + EA+ +++ YP W Sbjct: 213 YPTTNQVEEALARLVEAYYAMGVTGEAQTAAAVLGHNYPDSQW 255 >gi|299131916|ref|ZP_07025111.1| outer membrane assembly lipoprotein YfiO [Afipia sp. 1NLS2] gi|298592053|gb|EFI52253.1| outer membrane assembly lipoprotein YfiO [Afipia sp. 1NLS2] Length = 314 Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 88/273 (32%), Positives = 142/273 (52%), Gaps = 22/273 (8%) Query: 5 LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVG----WERQSSRD-VYLDSVTDVRYQRE 59 LGR +C FA+ + A G W++ ++D ++D D + Sbjct: 34 LGRQLC-----------FAMGVIVLAAPLGGCGTGNLWDKFFAKDETFVDQPAD-----K 77 Query: 60 VYEKAVLFLKEQNFSK-AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +Y + + L E+N K A + F + R P++ ARKSLLMSA+ Y +G Y + + Sbjct: 78 LYNEGLFLLNEKNDRKGAIKKFEEVDRQHPYSDWARKSLLMSAYASYQSGDYDECIANAN 137 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 YI+ +P S + Y YLV +S I DV DQ T+ + + ++ +Y NS Y A Sbjct: 138 RYISLHPGSPDAAYAQYLVAVSNYDQIPDVSRDQGRTEKAIAALEEVIRKYPNSEYATTA 197 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + R+QLA +E+ IGRYY+ + +Y AI RF++V+ Y H EEA+ARL EAY+ Sbjct: 198 KKKIEGARDQLAGREMTIGRYYMDKRDYTGAINRFKVVVTQYQTTRHVEEALARLTEAYM 257 Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 A+ ++ EA+ +++ +P W + LVK Sbjct: 258 AIGVVSEAQTAAAVLGHNFPDSRWYKDAYNLVK 290 >gi|49474448|ref|YP_032490.1| competence lipoprotein comL precursor [Bartonella quintana str. Toulouse] gi|49239952|emb|CAF26357.1| Competence lipoprotein comL precursor [Bartonella quintana str. Toulouse] Length = 297 Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 82/212 (38%), Positives = 121/212 (57%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A+ L +A + F + + + RKSL+M AF Y KY +A S+ + Sbjct: 60 LYNQALANLDSGRLGEASKKFLTIEKQYAYTEWGRKSLVMGAFTNYQLAKYDEAISMAQR 119 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 YIT YP S + Y YY++G+S I DV DQR TK + M +VERY +S YVK A+ Sbjct: 120 YITLYPGSDDSAYAYYIIGLSSFCRIPDVTRDQRDTKRAIAAMQLLVERYPDSEYVKDAK 179 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + +GR QLA KE+++GRYY + Y+AA RF+ V+ YSD EEA+ RL E +A Sbjct: 180 AKIRIGREQLAGKEMQVGRYYEEGRRYLAASRRFRKVVEEYSDTNQIEEALFRLTEVNLA 239 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271 L L EA+ +++ YP+ W ++ L+K Sbjct: 240 LGLTAEAQTAAAILGRNYPKSEWYKFSYNLLK 271 >gi|254470086|ref|ZP_05083490.1| outer membrane assembly lipoprotein YfiO [Pseudovibrio sp. JE062] gi|211960397|gb|EEA95593.1| outer membrane assembly lipoprotein YfiO [Pseudovibrio sp. JE062] Length = 288 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 84/245 (34%), Positives = 138/245 (56%), Gaps = 2/245 (0%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 + S+A+ +V +++D D D ++ +A+ + S A + F + R Sbjct: 22 YASLALALVVAG--CATKDDVDDLALDETPAEVMFNEALALRASGDISGAAKKFYELDRV 79 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 +P++ ARKSL+ A++ + GKY +A + E + T YP +K+ Y +++G SY + I Sbjct: 80 YPYSEFARKSLINIAYLNFKMGKYPEAVAAAERFTTLYPGNKDSAYALFIIGESYFRQIP 139 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 DV DQ T L M +V+RY +S Y K AR + +QLA KE+E+GRYYL R Y Sbjct: 140 DVGRDQAVTAKALDAMREVVQRYPDSEYTKQARQRIRATEDQLAGKEMEVGRYYLARRNY 199 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 +A+I RF++V+ NY H EEA+ RL E+Y AL + +EA+ +++ +PQ W + Sbjct: 200 LASINRFKVVVTNYQTTRHVEEALYRLTESYYALGVTNEAQTAAAVLGHNFPQSQWYQDA 259 Query: 267 ETLVK 271 +L+K Sbjct: 260 YSLLK 264 >gi|328542974|ref|YP_004303083.1| DNA uptake lipoprotein-like protein [polymorphum gilvum SL003B-26A1] gi|326412720|gb|ADZ69783.1| DNA uptake lipoprotein-like protein [Polymorphum gilvum SL003B-26A1] Length = 286 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 76/199 (38%), Positives = 121/199 (60%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 S A + F++ + +P++ ARKSL+ AF+ +S G+Y +A + E + T YP S++ Y Sbjct: 64 LSDAGKKFSELDKLYPYSEYARKSLINLAFINFSLGRYPEAIAASERFTTLYPGSEDSAY 123 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 Y++G SY + I DV DQ T+ L ++ ++ RY +S Y A+ V V +QLA K Sbjct: 124 ALYIIGQSYFRQIPDVTRDQEQTEKALSALNELIRRYPDSEYTADAKSKVLVAYDQLAGK 183 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E+++GRYYL R Y+AAI RF++V+ NY H EEA+ RL E+Y AL +++EA+ ++ Sbjct: 184 EMQVGRYYLDRRNYIAAINRFKMVVINYQTTRHVEEALFRLTESYYALGVVNEAQTAAAV 243 Query: 253 IQERYPQGYWARYVETLVK 271 + YP W + L+K Sbjct: 244 LGHNYPDSRWYKDAFALLK 262 >gi|15965919|ref|NP_386272.1| hypothetical protein SMc01876 [Sinorhizobium meliloti 1021] gi|307308229|ref|ZP_07587938.1| outer membrane assembly lipoprotein YfiO [Sinorhizobium meliloti BL225C] gi|307319696|ref|ZP_07599121.1| outer membrane assembly lipoprotein YfiO [Sinorhizobium meliloti AK83] gi|15075188|emb|CAC46745.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021] gi|306894627|gb|EFN25388.1| outer membrane assembly lipoprotein YfiO [Sinorhizobium meliloti AK83] gi|306901227|gb|EFN31833.1| outer membrane assembly lipoprotein YfiO [Sinorhizobium meliloti BL225C] Length = 288 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 76/203 (37%), Positives = 119/203 (58%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + + L ++A F + PF+ ARK+L+M+AFV Y G+YQ A + Sbjct: 53 LYNQGLANLNAGKTTEAARKFEAIDKQHPFSEYARKALVMNAFVAYRNGQYQDAINSTNR 112 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 Y+ YP+S++ Y Y+ G++Y + I V DQR ++ M +V++Y +S YV A+ Sbjct: 113 YLNLYPQSEDAAYAQYIQGLAYTKQIPSVTQDQRPAAKAIEAMQVVVDKYPDSEYVDDAQ 172 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + R+QLA KE+++GRYYL+R EY+AAI RF+ V+ Y EEA+ARLVEAY A Sbjct: 173 AKIRFARDQLAGKEMQVGRYYLERKEYLAAISRFRTVVERYPTTNQVEEALARLVEAYYA 232 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 + + EA+ +++ YP W Sbjct: 233 MGVTGEAQTAAAVLGHNYPDSQW 255 >gi|304392248|ref|ZP_07374190.1| lipoprotein [Ahrensia sp. R2A130] gi|303296477|gb|EFL90835.1| lipoprotein [Ahrensia sp. R2A130] Length = 278 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 75/204 (36%), Positives = 123/204 (60%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + Y +A+ L N S+A + F + R P++ A+K+ +MS ++ Y + +Y +A + G+ Sbjct: 42 QTYNEALANLDAGNSSEAKKKFAKLDRQHPYSNYAKKAGVMSTYLAYRSAEYPEAIARGK 101 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 ++ YP + Y YLVGMS+ + I DV DQ + K Q MS +V+RY S YV+ A Sbjct: 102 RFVQLYPSNAEAPYALYLVGMSHFRQINDVTRDQDSAKAAYQAMSNLVQRYPESEYVEDA 161 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + + ++QLA KE+ +GRYY +R EY+A+I R++ V+ + D H EEA+ARL E+Y Sbjct: 162 KRKMRISKDQLAGKEMLVGRYYQERREYLASINRYRTVVEQFEDTRHVEEALARLTESYY 221 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 AL L EA+ +++ +P W Sbjct: 222 ALGLQSEAQTAAAVLGHNFPDSQW 245 >gi|49475847|ref|YP_033888.1| competence lipoprotein comL precursor [Bartonella henselae str. Houston-1] gi|49238655|emb|CAF27901.1| Competence lipoprotein comL precursor [Bartonella henselae str. Houston-1] Length = 297 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 89/254 (35%), Positives = 138/254 (54%), Gaps = 11/254 (4%) Query: 24 LTIFFSIAVCFLVG--WERQSSRD----VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 L + F + C L G ++ +++ D V DV +Y +A+ L+ + A Sbjct: 23 LGMIFLGSTCILAGCLFKEKNTLDPSAYVLKIDPPDV-----LYNQALASLESGRLADAS 77 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + F + + + RKSL+M AF Y KY + S+ + YIT YPE+ + Y YY++ Sbjct: 78 KKFLIIEKQYAYTDWGRKSLVMGAFTNYRLEKYDDSISMAQRYITLYPEADDAAYAYYII 137 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 G+S + I DV DQR TK + M ++ERY NS YVK A+ + GR QLA KE+++G Sbjct: 138 GLSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPNSEYVKDAKAKIRFGREQLAGKEMQVG 197 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 RYY + Y+AA RF+ V+ YSD EEA+ RL E +AL L EA+ +++ Y Sbjct: 198 RYYEEGRRYLAASRRFRKVVEEYSDTNQIEEALFRLTEVNLALGLTLEAQTAAAILGRNY 257 Query: 258 PQGYWARYVETLVK 271 P+ W ++ L++ Sbjct: 258 PKSEWYKFSYNLLQ 271 >gi|295688858|ref|YP_003592551.1| outer membrane assembly lipoprotein YfiO [Caulobacter segnis ATCC 21756] gi|295430761|gb|ADG09933.1| outer membrane assembly lipoprotein YfiO [Caulobacter segnis ATCC 21756] Length = 315 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 76/203 (37%), Positives = 115/203 (56%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y L N+++A +YF + R P++ +R+S+LM+ + Y Y A + Sbjct: 53 LYSTGADRLDRGNWNEAVDYFREVERQHPYSEWSRRSILMTGYAHYMGNNYNDAIGDADR 112 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I+ YP + + Y YYL + Y + I DV DQ AT+ L + +V+RY NS Y AR Sbjct: 113 FISLYPGNPSASYAYYLKAVCYFEQIVDVNRDQAATEQALAALRDVVQRYPNSEYATDAR 172 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + +QLA KE+ IGRYYLK G+ +AAI RF+ VL + H EA+ RLVEAY+ Sbjct: 173 LKIDMVNDQLAGKEMAIGRYYLKNGQTLAAIGRFKAVLERHQTTSHTPEALYRLVEAYLT 232 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 L LMDEA+ +++ +P W Sbjct: 233 LGLMDEAKRNGAVLGYNFPGDRW 255 >gi|209884392|ref|YP_002288249.1| coml, competence lipoprotein [Oligotropha carboxidovorans OM5] gi|209872588|gb|ACI92384.1| coml, competence lipoprotein [Oligotropha carboxidovorans OM5] Length = 281 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 80/250 (32%), Positives = 136/250 (54%), Gaps = 6/250 (2%) Query: 24 LTIFFSIAVCFLVG-WERQSSRD-VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 +T+ + C W++ ++D ++D D Y +Y L ++++ A + F Sbjct: 12 ITLAAPLGGCGTGNLWDKFFAKDETFVDQPADKLYNEGLY----LLNEKKDRKGALKKFE 67 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + R P++ ARKSLLMSA+ Y +G Y + + YI+ +P S + Y YLV +S+ Sbjct: 68 EVDRQHPYSDWARKSLLMSAYAAYESGDYDECIASANRYISLHPGSPDAAYAQYLVAVSH 127 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 I DV DQ T+ + + +V +Y NS Y A+ + R+QLA +E+ IGRYY+ Sbjct: 128 YDQIPDVSRDQTRTEKAIASLEEVVRKYPNSEYATTAKKKIEGARDQLAGREMTIGRYYM 187 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 ++ +Y AI RF++V+ Y H EEA+ARL EAY+A+ ++ EA+ +++ +P Sbjct: 188 EKRDYTGAINRFKVVVTQYQTTRHVEEALARLTEAYMAIGVVSEAQTAAAVLGHNFPDSR 247 Query: 262 WARYVETLVK 271 W + LV+ Sbjct: 248 WYKDAYNLVR 257 >gi|148257409|ref|YP_001241994.1| hypothetical protein BBta_6164 [Bradyrhizobium sp. BTAi1] gi|146409582|gb|ABQ38088.1| hypothetical protein BBta_6164 [Bradyrhizobium sp. BTAi1] Length = 297 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 79/241 (32%), Positives = 128/241 (53%), Gaps = 6/241 (2%) Query: 33 CFLVG-WER-QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 C G W++ + D ++D D Y +Y L ++++ A + F + R P++ Sbjct: 37 CGTGGLWDKFLAKDDTFVDEPADKLYNEGLY----LMNEKKDVKGATKKFEEVDRQHPYS 92 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 ARKSLLMSA+ Y AG Y Y+T +P S + Y YL+ S+ I D+ Sbjct: 93 DWARKSLLMSAYASYQAGDYDGCIGAATRYVTLHPGSPDAAYAQYLIAASHYDQIPDISR 152 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 DQ T+ + + +V +Y NS Y A+ + R+QLA KE+++GRYY+++ +Y AAI Sbjct: 153 DQGRTEKAIAALEEVVRKYPNSEYATNAKAKMEGARDQLAGKEMDVGRYYMQKRDYTAAI 212 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 RF+ V+ Y H EEA+ RL EAY+ + ++ EA+ +++ +P W + LV Sbjct: 213 NRFKAVVTQYQTTRHVEEALYRLTEAYMTIGIVGEAQTAAAVLGHNFPDSKWYKDAYNLV 272 Query: 271 K 271 K Sbjct: 273 K 273 >gi|288958800|ref|YP_003449141.1| lipoprotein [Azospirillum sp. B510] gi|288911108|dbj|BAI72597.1| lipoprotein [Azospirillum sp. B510] Length = 271 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 78/244 (31%), Positives = 135/244 (55%), Gaps = 10/244 (4%) Query: 20 YKFALT-IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 Y+ LT I S A+ + D Y++ D ++ +A ++++ F KA + Sbjct: 6 YRLPLTAILLSAALSACSS----TKEDAYVERPAD-----QLLSEADAAMRDEAFKKAAK 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +++ R P++ A K+ L++A+ Y KY A + +I +P S +VDY YY+ Sbjct: 57 LYDEVERQHPYSDSASKAQLLAAYAHYQDLKYDDAILALDRFIQLHPGSPDVDYAYYMRA 116 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY + I DV DQ+ T+ L + +V R+ +S Y + A+ + + + LA KE+E+GR Sbjct: 117 LSYYEQITDVRRDQKMTRQALDALQEVVRRFPDSKYARDAKLKIDLTNDHLAGKEMEVGR 176 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 +YL++ +Y AAI RF++V+ NY H EA+ RLVE Y+AL + DEA+ +++ +P Sbjct: 177 FYLRQRQYTAAINRFRVVVENYQTTSHVPEALHRLVECYLALGVTDEAKAAAAVLGHNFP 236 Query: 259 QGYW 262 W Sbjct: 237 GSEW 240 >gi|163794453|ref|ZP_02188424.1| DNA uptake lipoprotein [alpha proteobacterium BAL199] gi|159180177|gb|EDP64700.1| DNA uptake lipoprotein [alpha proteobacterium BAL199] Length = 286 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 77/204 (37%), Positives = 118/204 (57%), Gaps = 4/204 (1%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E YE A+ + F KA F++ R P++ A ++ LM+A+ Y A KY ++ + + Sbjct: 56 EAYEAAL----KGEFKKAAPLFDEVERQHPYSIWATQAQLMAAYSLYQANKYTESVNALD 111 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +I P + NVDY YYL G+ Y + I DV DQ+ TK L+ +++R+ S + + A Sbjct: 112 RFIQLNPSNPNVDYAYYLKGLCYYEQIVDVGRDQKLTKQALESFDEVIKRFPTSKFARDA 171 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 R + + RN LA KE+ IGR+YL+RG+++AAI RFQ V+ + + EA+ RL EAY Sbjct: 172 RLKIDLTRNHLAGKEMAIGRWYLERGQHLAAINRFQKVVEQFDTTDQVPEALLRLTEAYT 231 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 AL L EA+ S++ YP W Sbjct: 232 ALGLTGEAKRTASVLGYNYPGTEW 255 >gi|86749129|ref|YP_485625.1| putative lipoprotein [Rhodopseudomonas palustris HaA2] gi|86572157|gb|ABD06714.1| putative lipoprotein [Rhodopseudomonas palustris HaA2] Length = 301 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 79/236 (33%), Positives = 126/236 (53%), Gaps = 6/236 (2%) Query: 38 WER--QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 W++ D + D D Y +Y L KE++ A + F + R P++ ARK Sbjct: 46 WDKFLAKDEDKFNDEPADKLYNEGLY----LMNKEKDLKGASKKFEEVDRQHPYSDWARK 101 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SLLMSA+ Y AG Y Y+T +P S + Y YL+ S+ I D+ DQ T Sbjct: 102 SLLMSAYSFYQAGDYDSCIGSATRYVTLHPGSPDAAYAQYLIAASHYDQIPDISRDQGRT 161 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + + + ++ +Y S Y A+ + R+QLA KE+++GR+Y+++ +Y AAI RF+ Sbjct: 162 EKAIAALEEVIRKYPTSEYANQAKQKLEGARDQLAGKEMDVGRFYMEKRDYAAAINRFKT 221 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 V+ Y H EEA+ARL EAY+A+ ++ EA+ +++ +P W + TLVK Sbjct: 222 VVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPDSRWYKDAYTLVK 277 >gi|154244287|ref|YP_001415245.1| putative lipoprotein [Xanthobacter autotrophicus Py2] gi|154158372|gb|ABS65588.1| putative lipoprotein [Xanthobacter autotrophicus Py2] Length = 284 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 118/204 (57%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y + + L+ Q KA + F + P++ ARKSLLM+ + + AGKY +A + G+ Sbjct: 48 KIYNEGLTLLRRQEPEKAAKRFEDVDKTHPYSEWARKSLLMTTYAYFEAGKYDEAIATGK 107 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 YI YP S++ Y +YLV + + I D+ DQR T+ L + + +Y N+ Y A Sbjct: 108 RYIALYPGSQDAAYAHYLVASALYENIPDITRDQRKTRQALDALEDVARKYPNTEYAATA 167 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + V R+QLA KE+ IGRYYL++ Y AI RF++V+ Y EEA+ RL EAY+ Sbjct: 168 KKKIEVARDQLAGKEMLIGRYYLEQRNYTGAINRFKVVVTQYQTTRQVEEALYRLTEAYM 227 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 AL ++ EA+ +++ +P W Sbjct: 228 ALGVVSEAQTAAAVLGYNFPDSSW 251 >gi|260577083|ref|ZP_05845061.1| outer membrane assembly lipoprotein YfiO [Rhodobacter sp. SW2] gi|259020661|gb|EEW23979.1| outer membrane assembly lipoprotein YfiO [Rhodobacter sp. SW2] Length = 280 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 84/230 (36%), Positives = 134/230 (58%), Gaps = 5/230 (2%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAYEYFNQCSRDF 87 ++ V L G +++V LDS+T E+Y++ L+ + ++A YF + R + Sbjct: 14 ALIVATLAGCGGGGTKEVPLDSLT----AEEIYKRGEYALETRPKPTEAIRYFTEVERLY 69 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 P+ A+++L+M AF + + KY++A S + Y+ YP ++ Y YL+ +SY I D Sbjct: 70 PYTEWAKRALIMQAFTYHKSKKYEEARSAAQRYLDYYPGDEDAGYAKYLLALSYYDQIDD 129 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 V DQ T LQ + ++E Y ++ Y + A + +QLAAKE+EIGRYYLKRG Y Sbjct: 130 VGRDQGVTFQALQALRAVIEEYPDTEYARSAILKFDMAFDQLAAKEMEIGRYYLKRGNYS 189 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 AAI RF++V+ ++ H EA+ RLVEAY+AL L DEA+ +++ Y Sbjct: 190 AAINRFRVVVQDFQTTTHTAEALHRLVEAYLALGLTDEAQTAGAILGYNY 239 >gi|90424787|ref|YP_533157.1| putative lipoprotein [Rhodopseudomonas palustris BisB18] gi|90106801|gb|ABD88838.1| putative lipoprotein [Rhodopseudomonas palustris BisB18] Length = 289 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 79/235 (33%), Positives = 125/235 (53%), Gaps = 5/235 (2%) Query: 38 WERQSSRD-VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 W++ ++D Y D D Y +Y L K ++ A + F + R P++ ARKS Sbjct: 35 WDKFMTKDETYTDEPADKLYNEGLY----LMNKGKDPKAASKKFEEVDRQHPYSDWARKS 90 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 LLMSA+ Y AG Y Y+T +P S + Y YL+ S+ I D+ DQ T+ Sbjct: 91 LLMSAYAFYEAGDYDSCIGSATRYVTMHPGSPDAAYAQYLIAASHYDQIPDISRDQGRTE 150 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + ++ +Y S Y A+ + R+QLA KE+ +GRYY+++ +Y AAI RF+ V Sbjct: 151 KAIAALEEVIRKYPTSEYATSAKKKLEGARDQLAGKEMNVGRYYMEKRDYTAAINRFKTV 210 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + Y H EEA+ARL EAY+A+ ++ EA+ +++ +P W + LVK Sbjct: 211 VTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPDSKWYQDAYNLVK 265 >gi|316933197|ref|YP_004108179.1| outer membrane assembly lipoprotein YfiO [Rhodopseudomonas palustris DX-1] gi|315600911|gb|ADU43446.1| outer membrane assembly lipoprotein YfiO [Rhodopseudomonas palustris DX-1] Length = 302 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 80/250 (32%), Positives = 130/250 (52%), Gaps = 6/250 (2%) Query: 24 LTIFFSIAVCFLVG-WER-QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 L + + C W++ + D +D D Y +Y L ++++ A + F Sbjct: 33 LALSLPLGGCGTGALWDKFLAKDDKMVDEPADKLYNEGLY----LMNQDKDTKGAAKKFE 88 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + R P++ ARKSLLMSA+ Y AG Y Y+T +P S + Y YL+ S+ Sbjct: 89 EVDRQHPYSDWARKSLLMSAYAYYQAGDYDSCIGAATRYVTLHPGSPDAAYAQYLIAASH 148 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 I D+ DQ T+ + + ++ +Y S Y A+ + R+QLA KE+++GRYY+ Sbjct: 149 YDQIPDISRDQGRTEKAIASLEEVIRKYPTSEYANSAKQKLEGARDQLAGKEMDVGRYYM 208 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + +Y AAI RF+ V+ Y H EEA+ARL EAY+A+ ++ EA+ +++ +P Sbjct: 209 SKRDYAAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPDSK 268 Query: 262 WARYVETLVK 271 W + TLVK Sbjct: 269 WYKDAYTLVK 278 >gi|115524131|ref|YP_781042.1| putative lipoprotein [Rhodopseudomonas palustris BisA53] gi|115518078|gb|ABJ06062.1| putative lipoprotein [Rhodopseudomonas palustris BisA53] Length = 301 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 79/235 (33%), Positives = 125/235 (53%), Gaps = 5/235 (2%) Query: 38 WERQSSRD-VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 W++ ++D Y D D Y +Y L + ++ A + F + R P++ ARKS Sbjct: 47 WDKFLTKDETYTDEPADKLYNEGLY----LMNQSKDPKAASKKFEEVDRQHPYSDWARKS 102 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 LLMSA+ Y AG Y Y+T +P S + Y YL+ S+ I D+ DQ T+ Sbjct: 103 LLMSAYAYYEAGDYDNCIGSATRYVTMHPGSADAAYAQYLIAASHYDQIPDISRDQGRTE 162 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + ++ +Y S Y A+ + R+QLA KE+ +GRYY++R +Y AAI RF+ V Sbjct: 163 KAMAALEEVIRKYPTSEYATTAKKKLEGARDQLAGKEMAVGRYYMERRDYTAAINRFKTV 222 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + Y H EEA+ARL EAY+A+ ++ EA+ +++ +P W + LVK Sbjct: 223 VTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPDSRWYKDAYNLVK 277 >gi|91977850|ref|YP_570509.1| putative lipoprotein [Rhodopseudomonas palustris BisB5] gi|91684306|gb|ABE40608.1| putative lipoprotein [Rhodopseudomonas palustris BisB5] Length = 301 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 79/236 (33%), Positives = 124/236 (52%), Gaps = 6/236 (2%) Query: 38 WER--QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 W++ D + D D Y +Y L KE++ A + F + R P++ ARK Sbjct: 46 WDKFLAKDEDKFNDEPADKLYNEGLY----LMNKEKDLKAASKKFEEVDRQHPYSDWARK 101 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SLLMSA+ Y AG Y Y+T +P S + Y YL+ S+ I DV DQ T Sbjct: 102 SLLMSAYSFYQAGDYDSCIGSATRYVTLHPGSPDAAYAQYLIAASHYDQIPDVSRDQGRT 161 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + + + ++ +Y S Y A+ + R+QLA KE+++GRYY+++ +Y AAI RF+ Sbjct: 162 EKAIAALEEVIRKYPTSEYANQAKQKLEGARDQLAGKEMDVGRYYMQKRDYTAAINRFKT 221 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 V+ Y H EEA+ARL EAY+ + ++ EA+ +++ +P W + LVK Sbjct: 222 VVTRYQTTRHVEEALARLTEAYMTIGIVGEAQTAAAVLGHNFPDSRWYKDAYNLVK 277 >gi|121602062|ref|YP_989220.1| putative lipoprotein [Bartonella bacilliformis KC583] gi|120614239|gb|ABM44840.1| putative lipoprotein [Bartonella bacilliformis KC583] Length = 279 Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 117/212 (55%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 VY +A+ +A + F+ + RKSL+MSA Y KY A S + Sbjct: 42 VYAQALSHFHSGKLDEALKKFSIIEEQHAYTEWGRKSLIMSASTNYRLAKYDDAISAAQR 101 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 YIT YP + + Y YYLVG+S Q I V DQ+ TK + M ++ERY S YV A+ Sbjct: 102 YITLYPTAGDAAYAYYLVGLSSFQQISHVTRDQQDTKRAIAAMQLLIERYPESDYVNDAK 161 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + GR QLA +E++IGRYY + +Y+AA RF+ V+ YSD + EEA+ RL E A Sbjct: 162 AKILFGREQLAGQEMQIGRYYERGQQYLAASRRFRTVIEEYSDTKQIEEALFRLTEVSFA 221 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271 L L++EA+ +++ YP+ W ++ L+K Sbjct: 222 LGLIEEAQTAAVMLERYYPESSWYKFASDLLK 253 >gi|170744725|ref|YP_001773380.1| putative lipoprotein [Methylobacterium sp. 4-46] gi|168198999|gb|ACA20946.1| putative lipoprotein [Methylobacterium sp. 4-46] Length = 298 Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 127/216 (58%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 Y V + R ++Y + + L++ ++ +A + F +++ ++ +RK++LM+A+ Y Sbjct: 44 YKPEVIERRPADKIYSEGLAKLEDHDYDEAVKRFQNLDKEYAYSDWSRKAVLMTAYANYE 103 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 KY+ A + + Y+ ++P SK+ Y Y++ MS+ + I DV DQ ++ L + +V Sbjct: 104 GAKYEDAITAAKRYLQRHPGSKDAAYAQYILAMSHYKQIPDVTRDQERSERALAALQELV 163 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 ++Y S Y A+ + + R+QLA KE+ +GRYYL R + AAI RF+ V++ Y HA Sbjct: 164 QKYPTSEYAADAKAKIQITRDQLAGKEMTVGRYYLDRRNFPAAINRFREVVSKYQTTRHA 223 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 EEA+ RL EAY+AL ++ EA+ +++ +P W Sbjct: 224 EEALERLAEAYMALGIVAEAQTAAAVLAHNFPDSPW 259 >gi|192292404|ref|YP_001993009.1| outer membrane assembly lipoprotein YfiO [Rhodopseudomonas palustris TIE-1] gi|192286153|gb|ACF02534.1| outer membrane assembly lipoprotein YfiO [Rhodopseudomonas palustris TIE-1] Length = 302 Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 82/254 (32%), Positives = 131/254 (51%), Gaps = 12/254 (4%) Query: 26 IFFSIAVCFLVG-------WER-QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 IF +A+ +G W++ + D +D D Y +Y L ++++ A Sbjct: 29 IFSLLALSLPLGGCGTGALWDKFLAKDDKMVDEPADKLYNEGLY----LMNQDKDTKGAA 84 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + F + R P++ ARKSLLMSA+ Y AG Y Y+T +P S + Y YL+ Sbjct: 85 KKFEEVDRQHPYSDWARKSLLMSAYAYYQAGDYDSCIGSATRYVTLHPGSPDAAYAQYLI 144 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 S I D+ DQ T+ + + ++ +Y S Y A+ + R+QLA KE++IG Sbjct: 145 AASNYDQIPDISRDQGRTEKAIAALEEVIRKYPTSEYANSAKQKLEGARDQLAGKEMDIG 204 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 RYY+ + +Y AAI RF+ V+ Y H EEA+ARL EAY+A+ ++ EA+ +++ + Sbjct: 205 RYYMSKRDYAAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNF 264 Query: 258 PQGYWARYVETLVK 271 P W + LVK Sbjct: 265 PDSRWYKDAYNLVK 278 >gi|167647062|ref|YP_001684725.1| outer membrane assembly lipoprotein YfiO [Caulobacter sp. K31] gi|167349492|gb|ABZ72227.1| outer membrane assembly lipoprotein YfiO [Caulobacter sp. K31] Length = 306 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 118/203 (58%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y L ++++A +YF + R P++ +R+S+LM+ + Y +Y +A S + Sbjct: 45 LYSTGANRLDRGSWNEAVDYFREVERQHPYSEWSRRSILMTGYAHYMGNQYNEAISDSDR 104 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I YP + + Y YYL + Y + I DV DQ AT+ L + +V+RY NS Y + AR Sbjct: 105 FIGLYPGNPSASYAYYLKAVCYFEQIVDVNRDQAATEQALAALRDVVQRYPNSEYAQDAR 164 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + +QLA KE+ IGRYYLK G+ +AAI RF+ V+ + H EA+ RLVE+Y+ Sbjct: 165 LKIDMVNDQLAGKEMTIGRYYLKNGQTLAAIGRFRTVIDRHQTTSHTPEALYRLVESYMT 224 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 L L+DEA+ +++ +P W Sbjct: 225 LGLLDEAKRNGAVLGYNFPGDPW 247 >gi|182677692|ref|YP_001831838.1| DNA uptake lipoprotein-like protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182633575|gb|ACB94349.1| DNA uptake lipoprotein-like protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 391 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 80/252 (31%), Positives = 136/252 (53%), Gaps = 13/252 (5%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDS-----------VTDVRYQREVYEKAVLFLKE 70 F L++ +A C +G + +S+ + + + DV ++Y + ++ L++ Sbjct: 22 FLLSVSLPLAACSSMG-DFDASKSLNPTNWFKGEKYEAKVIPDVPAD-DIYNQGLVRLQK 79 Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 +++ A + F + +P++ +K LLMSA+ QY G Y A + + Y T YP + + Sbjct: 80 KDYEAAGKKFADLEKQYPYSQWQKKGLLMSAYSQYQNGSYDDAIASAQRYYTLYPNAPDT 139 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 Y YYL MS I DV DQ + +I E++ S Y + A++ + V R+QLA Sbjct: 140 PYAYYLAAMSNYNQIPDVSRDQERAQKAAVLFQQIAEKFPKSEYGEDAKYKLQVCRDQLA 199 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 KE+ +GRYYL Y+AA+ RF+ VLA Y H+EEA+ RL EAY+AL +++EA+ Sbjct: 200 GKEMFVGRYYLNNHNYIAAVNRFREVLAKYQTTRHSEEALMRLTEAYLALGIVNEAQTAA 259 Query: 251 SLIQERYPQGYW 262 +++ +P W Sbjct: 260 AVLGHNFPDSQW 271 >gi|163760778|ref|ZP_02167858.1| hypothetical protein HPDFL43_13018 [Hoeflea phototrophica DFL-43] gi|162282100|gb|EDQ32391.1| hypothetical protein HPDFL43_13018 [Hoeflea phototrophica DFL-43] Length = 288 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 120/203 (59%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + + ++ ++A F + P++ ARK+++MSAF Y G+Y +A + Sbjct: 53 LYNQGLANIQAGQLTEASRKFQAVDKQHPYSEYARKAMVMSAFTNYRQGQYSEAINTASR 112 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 Y++ YP ++ Y Y+VG+SY + I +V DQR + + + ++ER+ S YV+ ++ Sbjct: 113 YLSLYPNDEDAAYAQYIVGLSYYRQIPEVTRDQRTSARAIAAFTEVIERFPESEYVEDSQ 172 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + R+QLA KE+++GRYYL+R E+VAA RF+LV+ Y + EEA+ARLVE Y A Sbjct: 173 AKLRYARDQLAGKEMQVGRYYLERKEFVAAANRFRLVVERYPNTRQIEEALARLVETYYA 232 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 + L EA+ +++ +P W Sbjct: 233 MGLESEAQTAAAVLGHNFPDSQW 255 >gi|92116844|ref|YP_576573.1| putative lipoprotein [Nitrobacter hamburgensis X14] gi|91799738|gb|ABE62113.1| putative lipoprotein [Nitrobacter hamburgensis X14] Length = 325 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 82/259 (31%), Positives = 131/259 (50%), Gaps = 12/259 (4%) Query: 21 KFALTIFFSIAVCFLVG------WERQSSRD--VYLDSVTDVRYQREVYEKAVLFLKEQN 72 K L + I L G W++ ++D + D D Y ++ L +++ Sbjct: 47 KLRLVVGLVILGTTLSGCGTGALWDKFLAKDEQTFSDEPADKLYNEGLF----LMNNQRD 102 Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 A + F++ R+ P++ ARKSLLMSA+ Y AG Y Y+T +P S + Y Sbjct: 103 LKAATKKFDEVDREHPYSEWARKSLLMSAYASYQAGDYDTCIGSASRYVTLHPGSPDAAY 162 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 YL+ S I D+ DQ T+ + + ++ +Y S Y A+ + R+QLA K Sbjct: 163 AQYLIAASNYDQIPDISRDQARTEKAMASLEEVIRKYPTSEYAGEAKKKLQGARDQLAGK 222 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E+ IGRYY++R +Y AI RF+ V+ Y H EEA+ARL EAY+A+ ++ EA+ ++ Sbjct: 223 EMAIGRYYMERRDYTGAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAV 282 Query: 253 IQERYPQGYWARYVETLVK 271 + +P W + LVK Sbjct: 283 LGHNFPNSRWYKDAYNLVK 301 >gi|39936582|ref|NP_948858.1| putative lipoprotein [Rhodopseudomonas palustris CGA009] gi|39650438|emb|CAE28961.1| Protein of unknown function UPF0169 [Rhodopseudomonas palustris CGA009] Length = 302 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 81/254 (31%), Positives = 131/254 (51%), Gaps = 12/254 (4%) Query: 26 IFFSIAVCFLVG-------WER-QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 +F +A+ +G W++ + D +D D Y +Y L ++++ A Sbjct: 29 VFSLLALSLPLGGCGTGALWDKFLAKDDKMVDEPADKLYNEGLY----LMNQDKDTKGAA 84 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + F + R P++ ARKSLLMSA+ Y AG Y Y+T +P S + Y YL+ Sbjct: 85 KKFEEVDRQHPYSDWARKSLLMSAYAYYQAGDYDSCIGSATRYVTLHPGSPDAAYAQYLI 144 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 S I D+ DQ T+ + + ++ +Y S Y A+ + R+QLA KE++IG Sbjct: 145 AASNYDQIPDISRDQGRTEKAIAALEEVIRKYPTSEYANSAKQKLEGARDQLAGKEMDIG 204 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 RYY+ + +Y AAI RF+ V+ Y H EEA+ARL EAY+A+ ++ EA+ +++ + Sbjct: 205 RYYMSKRDYAAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNF 264 Query: 258 PQGYWARYVETLVK 271 P W + LVK Sbjct: 265 PDSRWYKDAYNLVK 278 >gi|218531128|ref|YP_002421944.1| outer membrane assembly lipoprotein YfiO [Methylobacterium chloromethanicum CM4] gi|254562116|ref|YP_003069211.1| lipoprotein UPF0169; exported protein [Methylobacterium extorquens DM4] gi|218523431|gb|ACK84016.1| outer membrane assembly lipoprotein YfiO [Methylobacterium chloromethanicum CM4] gi|254269394|emb|CAX25360.1| putative lipoprotein UPF0169; putative exported protein [Methylobacterium extorquens DM4] Length = 291 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 70/204 (34%), Positives = 123/204 (60%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y + + ++++++ A + F+Q + + ++ +RK LLM+A+ Y KY A + + Sbjct: 50 KLYSEGLAKMEDRDYENAAKQFDQLDKQYTYSDWSRKGLLMTAYANYEGAKYDDAINASK 109 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 Y+ ++P SK+ Y YL+ MS + I DV DQ ++ L + +V++Y S Y A Sbjct: 110 RYLQRHPASKDAAYAQYLMAMSQYKQIPDVTRDQERSERALIALQELVQKYPTSEYAADA 169 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + + R+QLA KE+E+GR+YL++ + AAI RF+ V++ Y HAEEA+ RLVEAY+ Sbjct: 170 KAKIQITRDQLAGKEMEVGRFYLEKRAFPAAINRFRDVVSKYQTTRHAEEALERLVEAYM 229 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 AL L EA+ +++ +P W Sbjct: 230 ALGLTGEAQTAAAVLGHNFPDSPW 253 >gi|163852368|ref|YP_001640411.1| putative lipoprotein [Methylobacterium extorquens PA1] gi|163663973|gb|ABY31340.1| putative lipoprotein [Methylobacterium extorquens PA1] Length = 291 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 70/204 (34%), Positives = 123/204 (60%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y + + ++++++ A + F+Q + + ++ +RK LLM+A+ Y KY A + + Sbjct: 50 KLYSEGLAKMEDRDYENAAKQFDQLDKQYTYSDWSRKGLLMTAYANYEGAKYDDAINASK 109 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 Y+ ++P SK+ Y YL+ MS + I DV DQ ++ L + +V++Y S Y A Sbjct: 110 RYLQRHPASKDAAYAQYLMAMSQYKQIPDVTRDQERSERALIALQELVQKYPTSEYAADA 169 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + + R+QLA KE+E+GR+YL++ + AAI RF+ V++ Y HAEEA+ RLVEAY+ Sbjct: 170 KAKIQITRDQLAGKEMEVGRFYLEKRAFPAAINRFRDVVSKYQTTRHAEEALERLVEAYM 229 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 AL L EA+ +++ +P W Sbjct: 230 ALGLTGEAQTAAAVLGHNFPDSPW 253 >gi|240139704|ref|YP_002964181.1| putative lipoprotein UPF0169; putative exported protein [Methylobacterium extorquens AM1] gi|240009678|gb|ACS40904.1| putative lipoprotein UPF0169; putative exported protein [Methylobacterium extorquens AM1] Length = 291 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 70/204 (34%), Positives = 123/204 (60%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y + + ++++++ A + F+Q + + ++ +RK LLM+A+ Y KY A + + Sbjct: 50 KLYSEGLAKMEDRDYENAAKQFDQLDKQYTYSDWSRKGLLMAAYANYEGAKYDDAINASK 109 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 Y+ ++P SK+ Y YL+ MS + I DV DQ ++ L + +V++Y S Y A Sbjct: 110 RYLQRHPASKDAAYAQYLMAMSQYKQIPDVTRDQERSERALIALQELVQKYPTSEYAADA 169 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + + R+QLA KE+E+GR+YL++ + AAI RF+ V++ Y HAEEA+ RLVEAY+ Sbjct: 170 KAKIQITRDQLAGKEMEVGRFYLEKRAFPAAINRFRDVVSKYQTTRHAEEALERLVEAYM 229 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 AL L EA+ +++ +P W Sbjct: 230 ALGLTGEAQTAAAVLGHNFPDSPW 253 >gi|319405998|emb|CBI79629.1| competence lipoprotein precursor [Bartonella sp. AR 15-3] Length = 297 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 86/251 (34%), Positives = 134/251 (53%), Gaps = 6/251 (2%) Query: 26 IFFSI---AVCFLVGWERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYF 80 +F I VCFL G + +++ SV ++ +Y +A+ L S+A + F Sbjct: 22 VFIGILLGGVCFLAGCLGKG-KNILDPSVHVLKIDPPDVLYNQALANLDVGRLSEAAKKF 80 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + + + RKSL+M AF Y KY A S+ + YI+ YP + + Y YY++G+S Sbjct: 81 AVIEKQYAYTEWGRKSLIMGAFTNYRLAKYDDAISMAQHYISLYPLADDSAYAYYIIGLS 140 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 + I DV DQ+ TK + M ++ERY S YV A+ + GR QLA KE++IGRYY Sbjct: 141 SFRRIPDVTRDQQDTKRAIAAMQILIERYPQSEYVSDAKAKIRFGREQLAGKEMQIGRYY 200 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + +Y+AA RF+ V+ Y D EEA+ RL E AL L EA+ +++ YP+ Sbjct: 201 EEGRQYLAASKRFRTVIEEYPDTNQIEEALFRLTEVNFALGLTMEAQTAAAILGRNYPES 260 Query: 261 YWARYVETLVK 271 W ++ L++ Sbjct: 261 KWYKFSYDLLQ 271 >gi|220927172|ref|YP_002502474.1| outer membrane assembly lipoprotein YfiO [Methylobacterium nodulans ORS 2060] gi|219951779|gb|ACL62171.1| outer membrane assembly lipoprotein YfiO [Methylobacterium nodulans ORS 2060] Length = 299 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 70/216 (32%), Positives = 127/216 (58%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 Y + R ++Y + + L++ ++ +A + F +++ ++ +RK++LM+A+ Y Sbjct: 44 YKPEIIQRRPADKIYSEGLAKLEDHDYDEAVKRFENLDKEYAYSDWSRKAVLMTAYSNYE 103 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 KY+ A + + Y+ ++P SK+ Y Y++ MS+ + I DV DQ ++ L + +V Sbjct: 104 GQKYEDAITAAKRYLQRHPGSKDAAYAQYILAMSHYKQIPDVTRDQERSERALAALQELV 163 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 ++Y S Y A+ + + R+QLA KE+ IGRYYL+R + AAI RF+ V++ Y HA Sbjct: 164 QKYPTSEYAADAKAKIQITRDQLAGKEMAIGRYYLERRNFPAAINRFRDVVSRYQTTRHA 223 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 EEA+ RL EAY+AL ++ EA+ +++ +P W Sbjct: 224 EEALERLAEAYMALGIVGEAQTAAAVLGHNFPDSPW 259 >gi|27381705|ref|NP_773234.1| hypothetical protein bll6594 [Bradyrhizobium japonicum USDA 110] gi|27354874|dbj|BAC51859.1| bll6594 [Bradyrhizobium japonicum USDA 110] Length = 296 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 75/250 (30%), Positives = 131/250 (52%), Gaps = 6/250 (2%) Query: 24 LTIFFSIAVCFLVG-WERQSSRD-VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 + + +A C W++ +++D +++ D Y +Y L ++++ A + F Sbjct: 27 IMLALPLAGCGTGALWDKFTAKDDTFVEEPADKIYNEGLY----LMNEKKDMKAANKKFE 82 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + R P++ ARKSLLMSA+ Y G Y Y+T +P S + Y YL+ S+ Sbjct: 83 EVDRQHPYSDWARKSLLMSAYASYQGGDYDGCIGAATRYVTLHPGSPDAAYAQYLIAASH 142 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 I D+ DQ T+ + + ++ +Y S Y A+ + R+QLA KE+ +GRYY+ Sbjct: 143 YDQIPDISRDQSRTEKAIASLEEVIRKYPTSEYATSAKAKIEGARDQLAGKEMNVGRYYM 202 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 ++ +Y AAI R++ V+ Y H EEA+ RL EAY+A+ ++ EA+ +++ +P Sbjct: 203 QKRDYTAAINRYKAVVTQYQTTRHVEEALYRLTEAYMAIGIVGEAQTAAAVLGHNFPDSR 262 Query: 262 WARYVETLVK 271 W + LVK Sbjct: 263 WYKDAYNLVK 272 >gi|209963938|ref|YP_002296853.1| tetratricopeptide repeat family protein [Rhodospirillum centenum SW] gi|209957404|gb|ACI98040.1| tetratricopeptide repeat family protein [Rhodospirillum centenum SW] Length = 274 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 121/212 (57%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L +N+ KA F++ R P++ A ++ LM+A+ Y A +Y A + + Sbjct: 43 QIYTEAANALDNENYLKAAALFDEVERQHPYSQWAVRAQLMAAYAHYEALRYDDAITTLD 102 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +I+ +P ++N Y YYL + Y + I DV DQ T+ L + + R+ + Y + A Sbjct: 103 RFISLHPGNRNAAYAYYLKALCYYEQISDVRRDQSMTESALTALQDVARRFPATTYARDA 162 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + R+ LA K++E+GRYYL G+Y+AAI RF+ V+ Y H EA+ RL EAY+ Sbjct: 163 NLKLDLTRDHLAGKDMEVGRYYLVTGQYMAAIKRFRRVVDKYQTTSHVPEALHRLTEAYL 222 Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLV 270 AL ++DEA+ +L+ YP W + TL+ Sbjct: 223 ALGIVDEAQASAALLGHNYPGSDWYQRTYTLM 254 >gi|144897937|emb|CAM74801.1| competence lipoprotein ComL [Magnetospirillum gryphiswaldense MSR-1] Length = 271 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 70/204 (34%), Positives = 121/204 (59%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y +A+ +++ + KA F++ R P++ A K+ LM+A+V Y KY A + Sbjct: 39 ELYNEAMDLVEKGEYYKAALAFDEVDRQHPYSVWATKAQLMNAYVLYERNKYPDALVALD 98 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +I +P +K+ Y YYL G+ Y + + DV DQ+ T++ L+ + +V+RY S Y + A Sbjct: 99 RFIQLHPGNKDAPYAYYLKGLCYYEQVTDVARDQKMTEMALKSLQEVVDRYPASSYARDA 158 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + V + R+ LA KE+ I RYY KR +++AA+ R+++V+ Y H EA+ R+VE Y+ Sbjct: 159 KLKVDLTRDHLAGKEMNIARYYQKRDQWLAALNRYKIVVEQYQTTSHVPEALHRMVEIYL 218 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 L L +EA++ ++I +P W Sbjct: 219 TLGLTEEAKKTAAVIGHNFPGSDW 242 >gi|170748766|ref|YP_001755026.1| putative lipoprotein [Methylobacterium radiotolerans JCM 2831] gi|170655288|gb|ACB24343.1| putative lipoprotein [Methylobacterium radiotolerans JCM 2831] Length = 293 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 75/220 (34%), Positives = 126/220 (57%), Gaps = 1/220 (0%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 V DV + +Y + L++ ++ A + F+ + + ++ +RK+LLM+A+ Y KY Sbjct: 45 VPDVPADK-LYSDGLAKLEDSDYEGAVKKFDNLDKQYQYSEWSRKALLMTAYANYEGQKY 103 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A S + Y+ ++P SK+ Y YL+ MS + I DV DQ ++ L + +V++Y Sbjct: 104 DDAISASKRYLQRHPASKDAAYAQYLMAMSNYKQIPDVTRDQERSEKALVALQELVQKYP 163 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 S Y A+ + + R+QLA KE+EIGR+YL++ + AAI RF+ V+A Y HAEEA+ Sbjct: 164 TSEYAADAKAKIQITRDQLAGKEMEIGRFYLEKRNFPAAINRFRDVVAKYQTTRHAEEAL 223 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 RL EAY AL + EA+ +++ +P+ W + L+ Sbjct: 224 ERLTEAYWALGITQEAQNAAAVLGHNFPESPWYKDAHALL 263 >gi|75675253|ref|YP_317674.1| putative lipoprotein [Nitrobacter winogradskyi Nb-255] gi|74420123|gb|ABA04322.1| putative lipoprotein [Nitrobacter winogradskyi Nb-255] Length = 298 Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 72/207 (34%), Positives = 117/207 (56%), Gaps = 2/207 (0%) Query: 66 LFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 LFL K+++ + F++ R+ P++ ARKSLLMSA+ Y AG Y Y+T Sbjct: 67 LFLMNKQRDLKAVTKKFDEVDREHPYSEWARKSLLMSAYASYQAGDYDTCIGSASRYVTL 126 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 +P S + Y YL+ +S I DV DQ T+ ++ + ++ +Y S Y A+ + Sbjct: 127 HPGSPDAAYAQYLIAVSNYDQIADVSRDQARTEKAMRTLEEVIRKYPTSEYAGEAKKKLQ 186 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 R+QLA KE+ +GRYY++R +Y AI RF+ V+ + H EEA+ARL EAY+A+ ++ Sbjct: 187 GARDQLAGKEMAVGRYYMERRDYTGAINRFKTVVTRFQTTRHVEEALARLTEAYMAIGIV 246 Query: 244 DEAREVVSLIQERYPQGYWARYVETLV 270 EA+ +++ +P +W + LV Sbjct: 247 AEAQTAAAVLGHNFPDSHWYKDAYNLV 273 >gi|85714984|ref|ZP_01045969.1| putative lipoprotein [Nitrobacter sp. Nb-311A] gi|85698181|gb|EAQ36053.1| putative lipoprotein [Nitrobacter sp. Nb-311A] Length = 298 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 78/246 (31%), Positives = 130/246 (52%), Gaps = 7/246 (2%) Query: 28 FSIAVCFLVGW-ERQSSRD--VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 F++A C ++ +++D + D D Y ++ L KE + A + F++ Sbjct: 32 FTVAGCGTGPLLDKFTAKDEQTFSDEPADKLYNEGLF----LMNKEHDLKAATKKFDEVD 87 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 R+ P++ ARKSLLMSA+ Y AG Y Y+T +P + + Y YL+ +S Sbjct: 88 REHPYSEWARKSLLMSAYASYQAGDYDTCIGSASRYVTLHPGTPDAAYAQYLIAVSNYDQ 147 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 I DV DQ T+ + + ++ +Y S Y A+ + R+QLA KE+ IGRYY++R Sbjct: 148 IPDVSRDQARTEKAMHALEEVIRKYPTSEYAGEAKKKLQGARDQLAGKEMAIGRYYMERR 207 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 +Y AI R++ V+ + H EEA+ARL EAY+A+ ++ EA+ +++ +P W + Sbjct: 208 DYTGAINRYKTVVTRFQTTRHVEEALARLTEAYMAIGIVAEAQTAAAVLGHNFPDSRWYK 267 Query: 265 YVETLV 270 LV Sbjct: 268 DAYNLV 273 >gi|307944886|ref|ZP_07660223.1| lipoprotein [Roseibium sp. TrichSKD4] gi|307771810|gb|EFO31034.1| lipoprotein [Roseibium sp. TrichSKD4] Length = 288 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 77/241 (31%), Positives = 128/241 (53%), Gaps = 8/241 (3%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 ALTI +A C S++D D D +Y + + + A F Sbjct: 23 MALTIPLGLAAC-------SSTKDTE-DFALDDTPPEVLYNEGLALRAQGKLKDADAKFQ 74 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 Q + +P++ A+KSL+ A++ YS GKY +A + + ++T YP + + Y Y++G SY Sbjct: 75 QLDKLYPYSEYAKKSLVNMAYINYSRGKYPEAINAAQRFVTLYPGNDDSAYALYIIGQSY 134 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + + D+ DQ T+ S +++RY +S Y A + ++QLA KE+++GRYYL Sbjct: 135 FKQMPDISRDQAVTRKAASAYSELLQRYPDSEYSPDAETKLIAVKDQLAGKEMQVGRYYL 194 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 K+ Y+A I RF+ V+ Y H EEA+ RL EAY AL +++EA+ +++ +P Sbjct: 195 KKRNYIAGINRFKTVVLQYQTTRHVEEALFRLTEAYFALGVVNEAQTAAAVLGHNFPDTQ 254 Query: 262 W 262 W Sbjct: 255 W 255 >gi|296532811|ref|ZP_06895488.1| lipoprotein [Roseomonas cervicalis ATCC 49957] gi|296266872|gb|EFH12820.1| lipoprotein [Roseomonas cervicalis ATCC 49957] Length = 281 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 78/243 (32%), Positives = 129/243 (53%), Gaps = 5/243 (2%) Query: 24 LTIFFSIAVCFLVG----WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 L + +A LVG W+ + S SV D + +Y + L+++ + +A E Sbjct: 9 LRLSLILAAPLLVGACSAWDGKDSSLRPRASVAD-QSPEALYAAGIEALRQERYQQAVEM 67 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F+ + P++ A + LMSA+ +Y +Y +A + +I +P +++ Y YYL + Sbjct: 68 FDAVESNHPYSTWATSAKLMSAYSEYMRNRYTEAIGALDRFIQLHPAHRDIAYAYYLRAL 127 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y + I D DQR T+ L + +V R+ +S Y + AR + + R+ LA +E+ +GR+ Sbjct: 128 CYYEQIVDAERDQRGTETALAQLQDVVNRFPDSAYARDARLKMDLARDHLAGREMIVGRF 187 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y RG Y AAI RF+ V+ +Y H EA+ RL E Y+AL L +EAR+ S++ YP Sbjct: 188 YQARGLYTAAIGRFKRVVEDYQTTNHVPEALHRLTEVYLALGLTEEARQTASVLGHNYPG 247 Query: 260 GYW 262 W Sbjct: 248 SPW 250 >gi|83592277|ref|YP_426029.1| competence lipoprotein ComL [Rhodospirillum rubrum ATCC 11170] gi|83575191|gb|ABC21742.1| competence lipoprotein ComL, putative [Rhodospirillum rubrum ATCC 11170] Length = 292 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 118/204 (57%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y +AV L +++ A + F++ R P++ A K+ +MSA+ Y Y A Sbjct: 53 ELYNEAVDLLNTSSYALAAKAFDEVERQHPYSSWATKAQIMSAYALYENEAYDDAVVAIN 112 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +I +P ++++ Y YYL G+ Y + I DV DQ+ T+ + + +V R+ +SPY + A Sbjct: 113 RFIELHPGNRDIAYAYYLRGLCYYEQISDVRRDQQITRQAMSNLRDVVTRFPDSPYARDA 172 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 R + + R+ +A KE+ +GR+YLKR +++AA+ RF++V+ Y H EA+ R+VE Sbjct: 173 RLKIDLARDHIAGKEMSVGRFYLKRQDFLAALNRFRVVVEQYDQTTHVPEALYRMVEINT 232 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 L L DEA+ V +++ +P W Sbjct: 233 LLGLPDEAKRVAAVLGHNFPGSDW 256 >gi|188582377|ref|YP_001925822.1| lipoprotein [Methylobacterium populi BJ001] gi|179345875|gb|ACB81287.1| putative lipoprotein [Methylobacterium populi BJ001] Length = 291 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 121/204 (59%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y + + ++++++ A + F Q + + ++ +RK LLM+A+ Y KY A + + Sbjct: 50 KLYSEGLAKMEDKDYENAAKQFEQLDKQYTYSDWSRKGLLMTAYANYEGAKYDDAINASK 109 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 Y+ ++P SK+ Y YL+ MS + I DV DQ ++ L + +V++Y S Y A Sbjct: 110 RYLQRHPASKDAAYAQYLMAMSQYKQIPDVTRDQERSERALVALQELVQKYPTSEYAADA 169 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + + R+QLA KE+ +GR+YL++ + AAI RF+ V++ Y HAEEA+ RLVEAY+ Sbjct: 170 KAKIQITRDQLAGKEMAVGRFYLEKRAFPAAINRFRDVVSKYQTTRHAEEALERLVEAYM 229 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 AL L EA+ +++ +P W Sbjct: 230 ALGLTAEAQTAAAVLGHNFPDSPW 253 >gi|319404502|emb|CBI78107.1| competence lipoprotein precursor [Bartonella rochalimae ATCC BAA-1498] Length = 297 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 84/244 (34%), Positives = 126/244 (51%), Gaps = 5/244 (2%) Query: 31 AVCFLVGWERQSSRDVYLDS---VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 CFL G + LD V + +Y +A+ L S+A + F + + Sbjct: 30 GTCFLAGCLGKGKN--ILDPSMHVLKIDPPDVLYNQALANLDVGRLSEAAKKFAIIEKQY 87 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 + RKSL+M AF Y KY A S+ + YI+ YP + + Y YY++G+S + I D Sbjct: 88 AYTDWGRKSLIMGAFTNYRLAKYDDAISMAQHYISLYPLADDSAYAYYIIGLSSFRRIPD 147 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 V DQ+ TK + M ++ERY S YV A+ + GR QLA KE++IGRYY + Y+ Sbjct: 148 VTRDQQDTKRAIAAMQVLIERYPESEYVSDAKAKIRFGREQLAGKEMQIGRYYEEGQRYL 207 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 AA RF+ V+ Y D EEA+ RL E AL L EA+ +++ YP+ W ++ Sbjct: 208 AASRRFRTVIEEYPDTNQIEEALFRLTEVNFALGLTMEAQTAAAILGRNYPESKWYKFSY 267 Query: 268 TLVK 271 L++ Sbjct: 268 DLLQ 271 >gi|319899149|ref|YP_004159242.1| competence lipoprotein precursor [Bartonella clarridgeiae 73] gi|319403113|emb|CBI76671.1| competence lipoprotein precursor [Bartonella clarridgeiae 73] Length = 306 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 86/253 (33%), Positives = 133/253 (52%), Gaps = 4/253 (1%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYE 78 K + IF C L G + ++V SV ++ +Y +A+ L ++A + Sbjct: 30 KVLIGIFLG-GTCCLAGCLGKG-KNVLDPSVHVLKIDPPDVLYNQALANLDAGRLNEAAK 87 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F + + + RK+L+M AF Y KY A S+ + YI+ YP + + Y YY++G Sbjct: 88 KFAIIEKQYAYTEWGRKALVMGAFTNYRLAKYDDAISMAQHYISLYPLADDSAYAYYIIG 147 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +S + I DV DQR TK + M ++ERY S YV A+ + GR QLA KE++IGR Sbjct: 148 LSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPQSEYVSDAKAKIRFGREQLAGKEMQIGR 207 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YY + +Y+AA RF+ V+ YSD EEA+ RL E AL L EA+ +++ YP Sbjct: 208 YYEEGQQYLAASRRFRTVIEEYSDTNQIEEALFRLTEVNFALGLTMEAQTAAAILGRNYP 267 Query: 259 QGYWARYVETLVK 271 W ++ L++ Sbjct: 268 GSKWYKFSYDLLQ 280 >gi|304321637|ref|YP_003855280.1| competence lipoprotein ComL [Parvularcula bermudensis HTCC2503] gi|303300539|gb|ADM10138.1| competence lipoprotein ComL, putative [Parvularcula bermudensis HTCC2503] Length = 308 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 79/248 (31%), Positives = 131/248 (52%), Gaps = 10/248 (4%) Query: 21 KFALT----IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 K ALT + ++ C G R Y++ ++ +Y KA L+ + + +A Sbjct: 4 KIALTALGSVLLALGGCSNFG-NAPDDRLAYVEEPVEI-----LYRKAADALERRRYEEA 57 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 F + R P++ AR+++LM A+ +Y Y + + + ++ +P +K+ Y YYL Sbjct: 58 VLLFEEVERQHPYSSWARRAMLMVAYSEYLQNNYDASIASIDRFLAVHPGNKDAAYAYYL 117 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 ++Y + IRDV DQ T L + ++ RY +S Y + A + + R+ LA KE++I Sbjct: 118 RAINYYERIRDVGRDQDITAQALSALEDVIRRYPDSDYARDASLKLDLTRDHLAGKEMDI 177 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 GR+YLKR E++AAI RF VL Y H EA+ RLVEAY+ + + EA+ +++ Sbjct: 178 GRWYLKRNEHIAAINRFNEVLTTYETTSHVPEALHRLVEAYLEMGVAFEAQRHAAILAHN 237 Query: 257 YPQGYWAR 264 YP W R Sbjct: 238 YPDSNWYR 245 >gi|159044955|ref|YP_001533749.1| hypothetical protein Dshi_2414 [Dinoroseobacter shibae DFL 12] gi|157912715|gb|ABV94148.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12] Length = 279 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 81/235 (34%), Positives = 124/235 (52%), Gaps = 5/235 (2%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 +AV +Q +S DV + R +E L+ N +A YF + R + Sbjct: 14 LGLAVILAACGSQQPEFPALEESPPDVIFNRAEFE-----LQANNLDEAARYFGEVERLY 68 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 PF+ A+++L+M AF + +Y+ + + + Y+ YP ++ Y YL+ +SY I D Sbjct: 69 PFSEFAKRALIMQAFTYHRNREYESSRAAAQRYLDFYPADEDAAYAQYLLALSYYDQIDD 128 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 V DQ T LQ + ++E Y S Y K + + N LAAKE+EIGRYYLKRG Y Sbjct: 129 VGRDQGLTFQALQALRTVIEVYPESSYAKSSILKFDLAFNHLAAKEMEIGRYYLKRGHYA 188 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 AAI RF++V+ ++ H EA+ RLVEAY++L L EA+ +++ Y W Sbjct: 189 AAINRFRVVVEDFQTTTHTPEALHRLVEAYLSLGLEGEAQTAGAILGFNYQATDW 243 >gi|319407495|emb|CBI81143.1| competence lipoprotein precursor [Bartonella sp. 1-1C] Length = 306 Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 83/244 (34%), Positives = 126/244 (51%), Gaps = 5/244 (2%) Query: 31 AVCFLVGWERQSSRDVYLDS---VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 CFL G + LD V + +Y +A+ L S+A + F + + Sbjct: 39 GTCFLAGCLGKGKN--ILDPSMHVLKIDPPDVLYNQALANLDVGRLSEAAKKFAIIEKQY 96 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 + RKSL+M AF Y KY A ++ + YI+ YP + + Y YY++G+S + I D Sbjct: 97 AYTDWGRKSLIMGAFTNYRLAKYDDAIAMAQHYISLYPLADDSAYAYYIIGLSSFRRIPD 156 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 V DQ+ TK + M ++ERY S YV A+ + GR QLA KE++IGRYY + Y+ Sbjct: 157 VTRDQQDTKRAIAAMQVLIERYPESEYVSDAKAKIRFGREQLAGKEMQIGRYYEEGQRYL 216 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 AA RF+ V+ Y D EEA+ RL E AL L EA+ +++ YP+ W ++ Sbjct: 217 AASRRFRTVIEEYPDTNQIEEALFRLTEVNFALGLTMEAQTAAAILGRNYPESKWYKFSY 276 Query: 268 TLVK 271 L++ Sbjct: 277 DLLQ 280 >gi|254292784|ref|YP_003058807.1| outer membrane assembly lipoprotein YfiO [Hirschia baltica ATCC 49814] gi|254041315|gb|ACT58110.1| outer membrane assembly lipoprotein YfiO [Hirschia baltica ATCC 49814] Length = 260 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 122/206 (59%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A + + + +A F + R P++ A +++LM+A+VQY + +Y + + Sbjct: 41 QLYNEAGRSVDRKQWDRAALEFQEVQRQHPYSEWAERAMLMTAYVQYKSRQYAEVEASAG 100 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +Y YP SK+ Y YYL+ +S+ I DV DQ T+L L + +V RY + Y + A Sbjct: 101 QYTALYPSSKSAAYAYYLIALSHFDQITDVGRDQGRTELALSALQDVVRRYPTTEYARDA 160 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + R+QLA KE+E+GRYYLK E++AAI RF+ V+ Y HA EA+ RLVEAY+ Sbjct: 161 ELKIDMVRDQLAGKEMEVGRYYLKSSEFLAAINRFKRVVDEYETTTHAPEALHRLVEAYL 220 Query: 239 ALALMDEAREVVSLIQERYPQGYWAR 264 ++ L+ +A+ +++ YP W R Sbjct: 221 SIGLVGQAQAAAAVLGHNYPSSRWYR 246 >gi|83312955|ref|YP_423219.1| DNA uptake lipoprotein [Magnetospirillum magneticum AMB-1] gi|82947796|dbj|BAE52660.1| DNA uptake lipoprotein [Magnetospirillum magneticum AMB-1] Length = 304 Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 115/204 (56%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y +A+ + + KA + F++ R P++ A K+ LMSA+ Y KY A + Sbjct: 41 ELYNEAMDLVDANEYYKAAQLFDEVDRQHPYSVWATKAQLMSAYALYERNKYDDAIVALD 100 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +I +P +K++ Y YYL G+ Y + I DV DQ+ T+ L+ M +V+R+ ++PY + A Sbjct: 101 RFIQLHPGNKSIAYGYYLKGLCYYEQITDVARDQKLTEQALKIMQEVVDRFPSTPYARDA 160 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 R + + R+ LA KE+ IGRYY ++AA+ RF++V Y H EA+ R+VE Y Sbjct: 161 RLKIDLARDHLAGKEMNIGRYYQHLEHHLAALNRFKVVAEQYQTTTHVPEALYRMVEIYT 220 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 AL L EA +++ +P W Sbjct: 221 ALGLDQEAARAAAVLGHNFPGSDW 244 >gi|16126227|ref|NP_420791.1| competence lipoprotein ComL [Caulobacter crescentus CB15] gi|18202701|sp|Q9A6U9|Y1984_CAUCR RecName: Full=UPF0169 lipoprotein CC_1984; Flags: Precursor gi|13423451|gb|AAK23959.1| competence lipoprotein ComL, putative [Caulobacter crescentus CB15] Length = 305 Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 116/203 (57%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y L N+++A +YF + R P++ +R+S+LM+ + Y +Y +A + Sbjct: 44 LYSTGADRLDRGNWNEAVDYFREVERQHPYSEWSRRSILMTGYAHYMGNQYAEAIGDADR 103 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I+ YP + + Y +YL + Y + I DV DQ AT+ L + +V+RY N+ Y AR Sbjct: 104 FISLYPGNPSAQYAFYLKAICYFEQIVDVNRDQAATEQALAALRDVVQRYPNTEYATDAR 163 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + +QLA KE+ IGR+YLK G+ +AAI RF+ V+ + H EA+ RLVEAY+ Sbjct: 164 LKIDMVNDQLAGKEMAIGRWYLKNGQTLAAIGRFKAVIERHQTTSHTPEALFRLVEAYLT 223 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 + L +EA+ +++ +P W Sbjct: 224 IGLNEEAKRNGAVLGYNFPGDRW 246 >gi|221235000|ref|YP_002517436.1| ComL family lipoprotein [Caulobacter crescentus NA1000] gi|220964172|gb|ACL95528.1| lipoprotein, ComL family [Caulobacter crescentus NA1000] Length = 309 Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 116/203 (57%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y L N+++A +YF + R P++ +R+S+LM+ + Y +Y +A + Sbjct: 48 LYSTGADRLDRGNWNEAVDYFREVERQHPYSEWSRRSILMTGYAHYMGNQYAEAIGDADR 107 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I+ YP + + Y +YL + Y + I DV DQ AT+ L + +V+RY N+ Y AR Sbjct: 108 FISLYPGNPSAQYAFYLKAICYFEQIVDVNRDQAATEQALAALRDVVQRYPNTEYATDAR 167 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + +QLA KE+ IGR+YLK G+ +AAI RF+ V+ + H EA+ RLVEAY+ Sbjct: 168 LKIDMVNDQLAGKEMAIGRWYLKNGQTLAAIGRFKAVIERHQTTSHTPEALFRLVEAYLT 227 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 + L +EA+ +++ +P W Sbjct: 228 IGLNEEAKRNGAVLGYNFPGDRW 250 >gi|294676385|ref|YP_003577000.1| competence lipoprotein ComL [Rhodobacter capsulatus SB 1003] gi|294475205|gb|ADE84593.1| competence lipoprotein ComL [Rhodobacter capsulatus SB 1003] Length = 281 Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 70/184 (38%), Positives = 112/184 (60%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 ++A YF++ R +P++ A+++L+M AF Q+ A KY+ A S + Y+ YP S++ Y Sbjct: 57 AEALRYFSEVERLYPYSEYAKRALIMEAFAQHKAKKYEDARSSAQRYLDTYPGSEDAAYA 116 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 YL+ +SY I +V DQ T LQ + ++E Y +S Y + A + + LA+KE Sbjct: 117 KYLLALSYYDQIDEVGRDQGLTFQALQALRAVIEEYPDSDYARSAALKFDLAFDHLASKE 176 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +EIGR+YLK+G Y AAI RF++V+ Y H EA+ RLVE Y++L L DEA+ +++ Sbjct: 177 MEIGRFYLKKGHYTAAINRFRVVVEQYQTTTHTPEALMRLVECYLSLGLTDEAQTAGAIL 236 Query: 254 QERY 257 + Sbjct: 237 GHNF 240 >gi|83942732|ref|ZP_00955193.1| competence lipoprotein ComL, putative [Sulfitobacter sp. EE-36] gi|83953972|ref|ZP_00962693.1| competence lipoprotein ComL, putative [Sulfitobacter sp. NAS-14.1] gi|83841917|gb|EAP81086.1| competence lipoprotein ComL, putative [Sulfitobacter sp. NAS-14.1] gi|83846825|gb|EAP84701.1| competence lipoprotein ComL, putative [Sulfitobacter sp. EE-36] Length = 290 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 117/204 (57%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++YE+ L + ++A EYF++ R +P++ A+++L+M AF + Y + S + Sbjct: 51 QIYERGEFELNRKRPAEAAEYFSEIERLYPYSEWAKRALIMQAFAYHQDQDYPNSRSAAQ 110 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 YI +P+ + Y YL+ +SY I +V DQ T LQ + R++E Y +S Y + + Sbjct: 111 RYIDFFPDDDDASYASYLLALSYYDQIDEVGRDQGLTFQALQALRRVIEDYPDSEYARSS 170 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LA KE+E+GRYYL+R Y A+I RF++V+ ++ H EA+ RLVEAY+ Sbjct: 171 VLKFDLAFDHLAGKEMEVGRYYLRRKHYTASINRFRVVVEDFQTTTHTAEALHRLVEAYL 230 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 +L L DEA+ +++ Y W Sbjct: 231 SLGLTDEAQTAGAILGHNYQSTEW 254 >gi|300021786|ref|YP_003754397.1| outer membrane assembly lipoprotein YfiO [Hyphomicrobium denitrificans ATCC 51888] gi|299523607|gb|ADJ22076.1| outer membrane assembly lipoprotein YfiO [Hyphomicrobium denitrificans ATCC 51888] Length = 309 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 117/204 (57%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +++ A + +F A + F R+ P++ ARKS++M+A+ Y AGK +A + E Sbjct: 68 KMFANADAKMSSGSFDDAAKQFEAVDREHPYSPEARKSIVMAAYAYYRAGKTPEAIASAE 127 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 Y+ +P +K ++++ MSY ++ DQ A + L+ + R+ S Y + A Sbjct: 128 RYVALHPGTKEAPMAHHIIAMSYFDDLKTANRDQTAARKALEQFKILRTRFPESEYSRDA 187 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + + LAA+E+E+GRYYL + YVAAI RF+ V+++Y H EEA+ARLVE+Y+ Sbjct: 188 DNKIRICMDNLAAQEMEVGRYYLNQHNYVAAINRFKTVVSDYQTTAHVEEALARLVESYM 247 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 AL ++ EA+ +++ YP W Sbjct: 248 ALGVVTEAQNAAAILGHNYPDSKW 271 >gi|84501764|ref|ZP_00999936.1| Putative ComL lipoprotein [Oceanicola batsensis HTCC2597] gi|84390385|gb|EAQ02944.1| Putative ComL lipoprotein [Oceanicola batsensis HTCC2597] Length = 267 Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 70/204 (34%), Positives = 116/204 (56%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y++ L ++ A EYF + R +P++ A+++L+M AF + Y+++ + + Sbjct: 28 QIYQRGEYELDSSDYDSAAEYFGEVERLYPYSEWAKRALIMQAFSFHKDKNYEESRASAQ 87 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +I YP + Y YL+ +SY I +V DQ T LQ + ++ERY S Y + A Sbjct: 88 RFIDFYPTDDDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQSLRTVIERYPESDYARSA 147 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LAAKE+EIGRYYLKR + AAI RF++V+ ++ H EA+ RLVEAY+ Sbjct: 148 ILKFDLAFDHLAAKEMEIGRYYLKRDHFPAAINRFRVVVEDFQTTTHTAEALHRLVEAYL 207 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 +L L DEA+ +++ + W Sbjct: 208 SLGLTDEAQTAGAILGHNFQSTEW 231 >gi|84686348|ref|ZP_01014242.1| Putative ComL lipoprotein [Maritimibacter alkaliphilus HTCC2654] gi|84665531|gb|EAQ12007.1| Putative ComL lipoprotein [Rhodobacterales bacterium HTCC2654] Length = 297 Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 117/204 (57%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L+ ++ +A ++F + R +P+ +A+++L+M AF + G+Y+ A + + Sbjct: 58 QIYARAEYDLENNDYDEAAKWFGEVERVYPYTQLAKRALIMQAFAHHKDGEYELARAAAQ 117 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 ++ YP ++ Y YL+ +SY I DV DQ T LQ + ++E Y ++ Y + A Sbjct: 118 RFVDFYPGDEDAGYATYLLALSYYDQIEDVGRDQGLTYQALQALRDVIELYPDTEYARSA 177 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LAAKE+EIGRYYLKR Y AA+ RF++V+ + EA+ RLVE+YV Sbjct: 178 ILKFDLAYDHLAAKEMEIGRYYLKRKHYAAAVNRFRVVVEQFQTTTQTPEALHRLVESYV 237 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 +L L DEA +++ Y W Sbjct: 238 SLGLSDEAETAGAILGYNYQSTEW 261 >gi|310814891|ref|YP_003962855.1| tetratricopeptide TPR_2 repeat protein [Ketogulonicigenium vulgare Y25] gi|308753626|gb|ADO41555.1| tetratricopeptide TPR_2 repeat protein [Ketogulonicigenium vulgare Y25] Length = 289 Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 71/199 (35%), Positives = 111/199 (55%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +V++ L E A +F + R +P++ AR+ L+M AF + A Y+ + S + Sbjct: 50 QVFDLGEQQLNENRLDDAAFFFGEIERLYPYSSWARRGLIMQAFAYHRARDYENSRSAAQ 109 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 Y+ YP ++ Y YL+ +SY I D+ DQ T LQ + R++E Y +S Y A Sbjct: 110 RYVDFYPTDEDAAYAQYLLALSYYDQIDDIGRDQGVTFRALQELRRVIELYPDSEYATAA 169 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LA KE+E+GRYYL RG + AAI RF++V+ ++ + EA+ RLVEAY+ Sbjct: 170 VQKFDLAFDHLAGKEMEVGRYYLSRGNFTAAISRFRVVVEDFQTTTYTPEALMRLVEAYM 229 Query: 239 ALALMDEAREVVSLIQERY 257 AL L DEAR +++ Y Sbjct: 230 ALGLTDEARSAAAILGHNY 248 >gi|298293090|ref|YP_003695029.1| outer membrane assembly lipoprotein YfiO [Starkeya novella DSM 506] gi|296929601|gb|ADH90410.1| outer membrane assembly lipoprotein YfiO [Starkeya novella DSM 506] Length = 305 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 74/252 (29%), Positives = 130/252 (51%), Gaps = 6/252 (2%) Query: 21 KFALTIFFSIAVCFLVGW-ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + A + ++ W + + VY D + RY + + + + +++A + Sbjct: 35 RLAGLVMLGASLGGCASWFDTSTEAKVYPDVPAEQRYN-----EGLTLMAKDEYAEAIKR 89 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F R P++ ARK++LM A++ Y+ Y ++ S Y+ +P S + Y YL+ Sbjct: 90 FEDVDRQHPYSEWARKAVLMIAYINYAQANYDESISAARRYLALHPGSADAAYAQYLIAA 149 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 SY I D+ DQ T+ ++ + +V ++ N+ Y A+ + V R+QLA KE+ IGRY Sbjct: 150 SYFDQIPDISRDQARTERAMEALDEVVRKFPNTEYAVSAKKKLEVARDQLAGKEMMIGRY 209 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YL + Y AI RF++V+ Y H EEA+ RL EAY+AL ++ EA+ +++ +P Sbjct: 210 YLDQRNYAGAINRFKVVVTRYQTTRHVEEALYRLTEAYMALGVVGEAQTSAAVLGYNFPD 269 Query: 260 GYWARYVETLVK 271 W + LV+ Sbjct: 270 STWYKDAYKLVQ 281 >gi|87199749|ref|YP_497006.1| DNA uptake lipoprotein [Novosphingobium aromaticivorans DSM 12444] gi|87135430|gb|ABD26172.1| DNA uptake lipoprotein [Novosphingobium aromaticivorans DSM 12444] Length = 268 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 116/203 (57%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y A L + +A F++ R P++ AR++ LMSAF Y A Y ++ + Sbjct: 48 LYTAAKERLDRGDSKQAAALFDEVERQHPYSPWARRAQLMSAFSYYVARDYSKSVQSAQR 107 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +++ +P +K+ Y YYL+ + Y + I DV DQ+ T+ L M+ +V RY N+ Y AR Sbjct: 108 FLSIHPGNKDAPYAYYLIALCYYEQISDVTRDQKITQQALTAMNELVRRYPNTDYAADAR 167 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + + LA KE+EIGR Y + G+++A+ RF+ V+ Y HA EA+ RLVE+Y++ Sbjct: 168 LKIDLINDHLAGKEMEIGRMYQRSGKWLASSLRFRTVVDKYQTTSHAPEALYRLVESYLS 227 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 L L EA++ +++ YP W Sbjct: 228 LGLPVEAQKAAAVLGSNYPGSKW 250 >gi|149184730|ref|ZP_01863048.1| DNA uptake lipoprotein [Erythrobacter sp. SD-21] gi|148832050|gb|EDL50483.1| DNA uptake lipoprotein [Erythrobacter sp. SD-21] Length = 266 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 68/183 (37%), Positives = 107/183 (58%) Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F++ R P++ AR++ LMSAF Y AG Y + S + +++ +P +K+ Y YYL+ + Sbjct: 66 FDEVERQHPYSPWARRAQLMSAFSYYVAGDYNKTTSSAQRFLSIHPGNKDAPYAYYLIAL 125 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 SY + I DV DQ+ T+ L + + R+ S Y AR + + + LA KE+EIGRY Sbjct: 126 SYYEQISDVQRDQKVTEQALTALREVNRRFPQSQYAADARLKIDLVEDHLAGKEMEIGRY 185 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y + G+++AA RFQ V+ Y HA EA+ RLVE+ +AL + EA + +++ YP Sbjct: 186 YQRSGKWIAAQIRFQNVVETYQTTSHAPEALYRLVESSLALGIKPEAVKYAAVLGANYPG 245 Query: 260 GYW 262 W Sbjct: 246 NEW 248 >gi|259418921|ref|ZP_05742838.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B] gi|259345143|gb|EEW56997.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B] Length = 283 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 72/204 (35%), Positives = 113/204 (55%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++YE+ L A YF++ R +P++ A++SL+M AF + A Y+ + S + Sbjct: 44 QIYERGEFELARNREQDAAYYFSEVERLYPYSEWAKQSLIMQAFTYHQAEDYENSRSAAQ 103 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 YI YP ++ Y YL+ +SY I +V DQ T LQ + ++E Y +S Y A Sbjct: 104 RYIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQALRTVIEVYPDSEYASSA 163 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LA KE+EIGRYYLKR Y AAI RF++V+ ++ H EA+ RL+EAY+ Sbjct: 164 ILKFDLAFDHLAGKEMEIGRYYLKRQHYTAAINRFRVVVEDFQTTSHTAEALYRLIEAYL 223 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 +L L DEA+ +++ + W Sbjct: 224 SLGLTDEAQSAGAILGHNFQSTDW 247 >gi|126726631|ref|ZP_01742471.1| Putative ComL lipoprotein [Rhodobacterales bacterium HTCC2150] gi|126703960|gb|EBA03053.1| Putative ComL lipoprotein [Rhodobacterales bacterium HTCC2150] Length = 278 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 117/205 (57%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 R ++ A L+E+ KA + F + R +P++ +A+++L+M AF + Y+ + Sbjct: 38 RSIFTLAEQKLEEKEPEKAAKIFGEIERLYPYSDLAKRALIMQAFSYHKDKDYENSRIAA 97 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + +I YP ++ Y YL+ +SY I +V DQ T LQ + ++ERY ++ Y K Sbjct: 98 QRFIDFYPADEDAAYAEYLLALSYYDQIDEVGRDQGLTFQALQGLRTVIERYPDTEYAKS 157 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A + + LAAKE+EIGRYYLKR Y +AI RF++V+ ++ H EA+ RL+EAY Sbjct: 158 AILKFDLAFDHLAAKEMEIGRYYLKRDHYTSAINRFRVVVEDFQTTAHTAEALYRLIEAY 217 Query: 238 VALALMDEAREVVSLIQERYPQGYW 262 +AL L DEA+ +++ + W Sbjct: 218 LALGLADEAQTAGAILGHNFQSTEW 242 >gi|114798667|ref|YP_759117.1| putative competence lipoprotein ComL [Hyphomonas neptunium ATCC 15444] gi|114738841|gb|ABI76966.1| putative competence lipoprotein ComL [Hyphomonas neptunium ATCC 15444] Length = 277 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 116/204 (56%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y + L +++++A +F + R P++ AR++++MSA+ Y + Y + + E Sbjct: 39 QLYNQGTDRLDRRDYTRAKLFFEEVERQHPYSEWARRAMVMSAYASYRSRDYTTSITGAE 98 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 Y++ +P +Y YYL+ +++ I DV DQ T+ + ++ RY S Y + A Sbjct: 99 RYLSLHPGGSEAEYAYYLIALNHFDQITDVGRDQATTESARNALLEVIRRYPESEYARDA 158 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 R + + +QLA KE+ +GR+YL+ + +AA+ RF+ V+ +Y H+EEA+ RLVEAY+ Sbjct: 159 RVKLDMVNDQLAGKEMTVGRWYLRSNQTLAAVNRFRKVVTDYQTTSHSEEALHRLVEAYL 218 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 L L D+A + + YP W Sbjct: 219 TLGLRDQAVVAGATLGHNYPGSDW 242 >gi|329848741|ref|ZP_08263769.1| hypothetical protein ABI_18130 [Asticcacaulis biprosthecum C19] gi|328843804|gb|EGF93373.1| hypothetical protein ABI_18130 [Asticcacaulis biprosthecum C19] Length = 295 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 118/203 (58%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + L ++++++A +YF + R P++ +R++++M+ + Y AGKY +A++ ++ Sbjct: 45 LYATGMERLDDKSWNEAGQYFEEVQRQHPYSEWSRRAIVMTIYTHYQAGKYAEASAASDQ 104 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I YP S+ Y YY+ + + I DV DQ +T +S +V RY +S Y K AR Sbjct: 105 FIHLYPGSELTPYAYYMKAICSFEQIVDVGRDQASTTAAQALLSDVVRRYPSSEYAKDAR 164 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + ++QLA KE+EIGRYYL + +AAI RF+ V + Y H EA+ RLVEA Sbjct: 165 VKIDMVQDQLAGKEMEIGRYYLNDNQPLAAIGRFKTVASTYQTTSHTPEALYRLVEANEV 224 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 + L +EA +++ YP W Sbjct: 225 MGLHEEAMRNGAVLGYNYPGDRW 247 >gi|148554377|ref|YP_001261959.1| DNA uptake lipoprotein-like protein [Sphingomonas wittichii RW1] gi|148499567|gb|ABQ67821.1| DNA uptake lipoprotein-like protein [Sphingomonas wittichii RW1] Length = 261 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 75/244 (30%), Positives = 128/244 (52%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 L K + I IA LV ++ D+ R +Y A L + A Sbjct: 2 LRKVSRPIALMIAAATLVPLAGCATSKNKGDTKYVARDVDTLYNAAKERLDRHQYKLAAA 61 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F++ R P++ AR++ LMSAF Y A +Y ++ + + +I+ +P +++ Y YL+ Sbjct: 62 LFDEVERQHPYSVWARRAQLMSAFSYYLARQYTESIASAQRFISIHPGNRDAPYALYLIA 121 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 + Y + I+DV DQ+ T+ L ++ ++ RY +S Y AR V + + LA KE+EIGR Sbjct: 122 IDYYEQIQDVTRDQKLTQNALDALNELIRRYPDSRYAADARVKVDLVNDHLAGKEMEIGR 181 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 +Y +RG+++A++ RF+ V+ Y H EA+ RL E+Y+ L + EA +++ YP Sbjct: 182 FYQRRGDWLASVVRFRTVVDKYDTTSHTPEALMRLTESYLELGVPQEAERAAAVLGANYP 241 Query: 259 QGYW 262 W Sbjct: 242 GSKW 245 >gi|157825369|ref|YP_001493089.1| hypothetical protein A1C_01315 [Rickettsia akari str. Hartford] gi|157799327|gb|ABV74581.1| hypothetical protein A1C_01315 [Rickettsia akari str. Hartford] Length = 247 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 76/242 (31%), Positives = 127/242 (52%), Gaps = 7/242 (2%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 I + F +++S D+ + T +Y + V L +Q + KA E F + P Sbjct: 13 IGLVFSGCKSKKTSDDIVVPIPT-------LYNEGVTLLAKQKYKKAAEEFGRVFYQHPG 65 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + ++ LM A+ + A +Y++A + E +I +P + ++ Y YYL +SY ++ DV Sbjct: 66 NAMTPQAELMQAYSLFLAAQYEEAVDVLEMFINLHPANVDIAYAYYLKALSYYMLVSDVN 125 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 +DQ T L ++ R+ N+ Y + + + + LA KE+ +GR+YLK+ +AA Sbjct: 126 HDQSRTSLAKDSFEDVIARFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKQNPMAA 185 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 I RF+ V+ NY H+ EA+ RLVE Y+ L L DEA++ S++ YP W Y L Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLVEIYMMLGLPDEAQKYASVLGYNYPDSPWYSYAYKL 245 Query: 270 VK 271 VK Sbjct: 246 VK 247 >gi|254504434|ref|ZP_05116585.1| outer membrane assembly lipoprotein YfiO [Labrenzia alexandrii DFL-11] gi|222440505|gb|EEE47184.1| outer membrane assembly lipoprotein YfiO [Labrenzia alexandrii DFL-11] Length = 268 Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 112/192 (58%) Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F + + +P++ ++KSL+ A++ Y+ GKY + + ++T YP + Y+ YLVG Sbjct: 54 FEELDKLYPYSEYSKKSLVNLAYLNYTRGKYTETVTTANRFVTLYPGDPDSAYMLYLVGQ 113 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 SY + + D+ DQ T+ +++R+ S YV A+ + + ++QL KE+++GRY Sbjct: 114 SYYRQMPDITRDQATTERAASAYGELLQRFPESEYVPDAQRKLLIVQDQLGGKEMQVGRY 173 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YL+R YVAA+ RF+ V+ NY H EEA+ RL EAY AL ++ EA+ +++ +P Sbjct: 174 YLERRNYVAAVNRFKTVVNNYQTTRHVEEALFRLTEAYYALGVISEAQTAAAVLGHNFPD 233 Query: 260 GYWARYVETLVK 271 W + TL+ Sbjct: 234 TQWYKDAYTLLN 245 >gi|146276754|ref|YP_001166913.1| TPR repeat-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145554995|gb|ABP69608.1| Tetratricopeptide TPR_2 repeat protein [Rhodobacter sphaeroides ATCC 17025] Length = 278 Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 78/230 (33%), Positives = 126/230 (54%), Gaps = 5/230 (2%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVR-YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 ++ V L G S ++ L++ T + YQR YE + +A YF++ R + Sbjct: 12 ALCVALLTGCGGGSQKEPPLENFTAEQIYQRGEYE----LEAQTKPDRAIRYFSEVERLY 67 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 P+ A+++L+M A+ + A Y++A + ++ YP ++ Y YL+ +SY I + Sbjct: 68 PYTEWAKRALIMQAYSYHKAKNYEEARGAAQRFLDFYPGDEDAAYAQYLLALSYYDQIDE 127 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 V DQ T LQ + ++E+Y +S Y + A + + LAAKE+EIGRYYLKRG Y Sbjct: 128 VGRDQGLTFQALQALRVVIEQYPDSEYAQSAILKFDLAFDHLAAKEMEIGRYYLKRGHYS 187 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 AAI RF+ V+ + H EA+ RLVE Y+AL L +EA+ +++ Y Sbjct: 188 AAINRFRTVVEEFQTTTHTAEALHRLVEGYLALGLQNEAQTAGAILGHNY 237 >gi|119387190|ref|YP_918245.1| putative ComL lipoprotein [Paracoccus denitrificans PD1222] gi|119377785|gb|ABL72549.1| putative ComL lipoprotein [Paracoccus denitrificans PD1222] Length = 280 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 70/200 (35%), Positives = 116/200 (58%), Gaps = 1/200 (0%) Query: 59 EVYEKAVLFLKEQNFSK-AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E+Y++ L+ K A +YF + R +P++ A+++L+M A+ + A Y++A Sbjct: 40 EIYKRGEYELENSRRPKDAVQYFTEVERLYPYSEWAKRALIMQAYSYHRARDYEEARGAA 99 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + +I YP ++ Y YL+ +SY I ++ DQ T LQ + ++E+Y ++ Y + Sbjct: 100 QRFIDTYPGDEDAAYAKYLLALSYYDQIDEIGRDQGLTFQALQSLREVIEQYPDTEYARS 159 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A + + LAAKE+EIGRYYLKRG Y AAI RF++V+ + H EA+ RL EAY Sbjct: 160 AILKFDLAFDHLAAKEMEIGRYYLKRGHYTAAINRFRVVVEEFQTTSHTPEALMRLTEAY 219 Query: 238 VALALMDEAREVVSLIQERY 257 +AL L DEA+ +++ + Sbjct: 220 LALGLNDEAQTAGAILGHNF 239 >gi|86137669|ref|ZP_01056246.1| competence lipoprotein ComL, putative [Roseobacter sp. MED193] gi|85826004|gb|EAQ46202.1| competence lipoprotein ComL, putative [Roseobacter sp. MED193] Length = 282 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 114/205 (55%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++++E+ L A YF++ R +P++ A+++L+M AF + + Y+ + Sbjct: 42 QQIFERGEFELARSRTKDAAFYFSEIERLYPYSEFAKQALIMQAFANHQSKDYEASRGAA 101 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + +I YP ++ Y YL+ +SY I +V DQ T LQ + ++E Y +S Y Sbjct: 102 QRFIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQSLRTVIEVYPDSEYATS 161 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A + + LA KE+EIGRYYL+RG Y +AI RF++V+ ++ H EA+ RLVEAY Sbjct: 162 AILKFDLAFDHLAGKEMEIGRYYLRRGHYTSAISRFRVVVEDFQTTSHTAEALHRLVEAY 221 Query: 238 VALALMDEAREVVSLIQERYPQGYW 262 ++L L +EA+ +++ Y W Sbjct: 222 LSLGLTEEAQTAGAILGHNYQSTDW 246 >gi|297717818|gb|ADI50052.1| DNA uptake lipoprotein [Candidatus Odyssella thessalonicensis L13] Length = 278 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 119/204 (58%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y A + +++ A + F + R P++ + K+ LMSA+ Y A KY +A Sbjct: 35 QLYNMAKDQMDSGSYNTAAKTFAEVERQHPYSEWSLKAQLMSAYCYYEAKKYTEAIEGYN 94 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +I +P +++ Y YY+VG+SY + I V DQ T+ + ++ R+ +SPY K A Sbjct: 95 VFIQLHPGHEHIPYAYYMVGLSYYEQIPTVHRDQTVTEKAQEAFQEVINRFPDSPYAKDA 154 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 +F + + R+ LA KE+++GRYYL++ Y+AA+ RF+ V+ + H EA+ R+VE Y+ Sbjct: 155 KFKMDLLRDHLAGKEMDVGRYYLRQRSYLAAVNRFKEVVDRFQTTSHVPEALHRMVECYL 214 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 AL L+++A + +++ +P W Sbjct: 215 ALGLVEQAYQTAAILGHNFPGSLW 238 >gi|103486038|ref|YP_615599.1| DNA uptake lipoprotein [Sphingopyxis alaskensis RB2256] gi|98976115|gb|ABF52266.1| DNA uptake lipoprotein [Sphingopyxis alaskensis RB2256] Length = 264 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 77/233 (33%), Positives = 123/233 (52%), Gaps = 7/233 (3%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 +A C G +Q +R V D T +Y A L + A F++ R P+ Sbjct: 24 LAACAGGGGVKQDTRYVARDVNT-------LYRAAQERLDRGQYGIAAALFDEVERQHPY 76 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + AR++ LMS+F Y +Y A + ++ +P +K+ Y YYL+ +SY + I DV Sbjct: 77 SPWARRAQLMSSFSYYMDREYTPAIEAAQRFLAIHPGNKDAPYAYYLIALSYYEQISDVT 136 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 DQR T+ + IV RY +S Y AR + + ++ LA KE+EIGR+Y + ++AA Sbjct: 137 RDQRITQQAQAALGEIVRRYPDSRYAADARLKLDLVQDHLAGKEMEIGRFYQRSSNWLAA 196 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 RF+ V+ Y HA EA+ RL E+Y+AL + +EA++ +++ YP W Sbjct: 197 SIRFREVVDKYQTTSHAPEALYRLTESYLALGIPEEAKKSAAVLGANYPGNEW 249 >gi|83949542|ref|ZP_00958275.1| competence lipoprotein ComL, putative [Roseovarius nubinhibens ISM] gi|83837441|gb|EAP76737.1| competence lipoprotein ComL, putative [Roseovarius nubinhibens ISM] Length = 283 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 119/205 (58%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + ++E+ L +N+ A + F + R +P++ + +++++M A+ + Y+ + S Sbjct: 43 QHIFERGEYDLSRRNYDLAAQSFGEIERLYPYSELTKRAVIMQAYSHHLDKDYEASRSAA 102 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + YI YP ++ Y YL+ +SY I +V DQ T L LQ + +++E Y +S Y + Sbjct: 103 QRYIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQGLTFLALQELRKVIEIYPDSEYARS 162 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A + + LA+KE+E+GRYYLKR + AAI RF++V+ ++ H EA+ RLVEAY Sbjct: 163 AILKFDLAFDHLASKEMEVGRYYLKRDHFSAAINRFRVVVEDFQTTSHTPEALHRLVEAY 222 Query: 238 VALALMDEAREVVSLIQERYPQGYW 262 ++L L++EA+ +++ + W Sbjct: 223 LSLGLVNEAQTAAAILGHNFRATDW 247 >gi|197105773|ref|YP_002131150.1| DNA uptake lipoprotein [Phenylobacterium zucineum HLK1] gi|196479193|gb|ACG78721.1| DNA uptake lipoprotein [Phenylobacterium zucineum HLK1] Length = 305 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 67/192 (34%), Positives = 110/192 (57%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 +++A YF + R P++ +R+S+LM A+ Y + Y +A + +I YP + Y Sbjct: 56 WNQAINYFQEVERQHPYSEWSRRSILMQAYAHYQSNDYPEAIGDADRFIQLYPGNPAAAY 115 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 +Y+ + Y + I DV DQ AT L+ + +V+RY S Y + AR + + +QLA K Sbjct: 116 AHYIKAICYFEQIVDVGRDQAATGQALEALRAVVQRYPASEYAQDARLKIDMVNDQLAGK 175 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E+ +GR+YL+ G+ +AA+ RF+ V+ Y H EA+ RLVEAY+ L L +EA+ ++ Sbjct: 176 EMTVGRWYLRNGDTLAAVNRFKTVVDRYQTTTHTPEALYRLVEAYLTLGLTEEAKRNGAV 235 Query: 253 IQERYPQGYWAR 264 + YP W R Sbjct: 236 LGYNYPGDPWYR 247 >gi|326387607|ref|ZP_08209213.1| DNA uptake lipoprotein [Novosphingobium nitrogenifigens DSM 19370] gi|326207653|gb|EGD58464.1| DNA uptake lipoprotein [Novosphingobium nitrogenifigens DSM 19370] Length = 268 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 124/234 (52%), Gaps = 5/234 (2%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 SI + G + Y+ D +Y A L L + + A F++ R P Sbjct: 22 SIGLAGCAGGNKTKKDVAYVARDVDT-----LYMAAKLRLDQGDAKAAAALFDEVERQHP 76 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 ++ AR++ LMS+F Y A Y ++ + +++ +P +K+ Y YYLV + Y + I DV Sbjct: 77 YSPWARRAQLMSSFSYYMARDYAKSIQAAQRFLSIHPGNKDAPYAYYLVALCYYERISDV 136 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 DQ+ T+ LQ ++ ++ RY + Y A+ + + + LA KE+E+GR+Y + G+++A Sbjct: 137 TRDQKDTQQALQALNEVIRRYPATTYATDAKVKLDLVNDHLAGKEMEVGRFYERSGKWLA 196 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 RF+ V+ Y H EA+ RLVE Y++L + +EA++ +++ YP W Sbjct: 197 GTMRFRAVVDKYQQTSHTPEALYRLVECYLSLGIPEEAQKAAAVLGNNYPGNEW 250 >gi|254460220|ref|ZP_05073636.1| competence lipoprotein ComL [Rhodobacterales bacterium HTCC2083] gi|206676809|gb|EDZ41296.1| competence lipoprotein ComL [Rhodobacteraceae bacterium HTCC2083] Length = 289 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 112/204 (54%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++YE+ L+ + A YF + R +P++ A++ L+M AF + Y+ + + + Sbjct: 50 QIYERGEFELERKRDDDAAFYFGEVERLYPYSEWAKRGLIMQAFAYHKDKDYENSRASAQ 109 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +I YP + Y YL+ +SY I D+ DQ T LQ + ++ERY +S Y A Sbjct: 110 RFIDVYPTDDDAAYAQYLLALSYYDQIEDLGRDQGLTFQALQGLRTVIERYPDSEYTSSA 169 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LA KE+EIGRYYL+R Y ++I RF++V+ ++ H EA+ RLVE+Y+ Sbjct: 170 ILKFDLAFDHLAGKEMEIGRYYLRRDHYTSSINRFRVVVEDFQTTTHTPEALHRLVESYL 229 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 +L L +EA+ +++ Y W Sbjct: 230 SLGLNEEAQTAGAILGHNYKSTEW 253 >gi|126740309|ref|ZP_01755997.1| competence lipoprotein ComL, putative [Roseobacter sp. SK209-2-6] gi|126718445|gb|EBA15159.1| competence lipoprotein ComL, putative [Roseobacter sp. SK209-2-6] Length = 283 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 112/204 (54%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +++E+ L A YF++ R +P++ A+++L+M AF + + Y+ + + Sbjct: 44 QIFERGEFELARSRTKDAAYYFSEIERLYPYSEYAKQALIMQAFAYHQSKDYENSRGAAQ 103 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +I YP ++ Y YL+ +SY I +V DQ T LQ + ++E Y +S Y A Sbjct: 104 RFIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQSLLTVIEVYPDSEYANAA 163 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LA KE+EIGRYYL+RG + +AI RF++V+ Y H EA+ RLVEAY+ Sbjct: 164 ILKFDLAFDHLAGKEMEIGRYYLRRGHFTSAINRFRVVVEEYQTTTHTPEALHRLVEAYL 223 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 +L L DEA+ +++ Y W Sbjct: 224 SLGLTDEAQTAGAILGHNYQSSEW 247 >gi|163732123|ref|ZP_02139569.1| competence lipoprotein ComL, putative [Roseobacter litoralis Och 149] gi|161394421|gb|EDQ18744.1| competence lipoprotein ComL, putative [Roseobacter litoralis Och 149] Length = 273 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 112/204 (54%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +++E+ L A YF + R +P++ AR++L+M AF + Y + S + Sbjct: 34 QIFERGEFELTRNRPDDAAFYFAEIERLYPYSDWARRALIMQAFSYHQDQDYPNSRSAAQ 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +I YP+ + Y YL+ +SY I +V DQ T LQ + + +ERY +S Y + + Sbjct: 94 RFIDFYPDDDDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQALRQTIERYPDSEYARAS 153 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LA KE+EIGRYYL+R + AAI RF++V+ ++ H EA+ RLVEAY+ Sbjct: 154 ILKFDLAFDHLAGKEMEIGRYYLRRDHFAAAINRFRVVVEDFQTTSHTPEALHRLVEAYL 213 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 +L L DEA+ +++ Y W Sbjct: 214 SLGLTDEAQTAGAILGYNYQSTIW 237 >gi|296285037|ref|ZP_06863035.1| DNA uptake lipoprotein [Citromicrobium bathyomarinum JL354] Length = 268 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 112/203 (55%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y A L N A F++ R P++ AR++ LMSAF Y + Y +A + Sbjct: 45 LYATAKQRLDRGNPQLAAALFDEVERQHPYSPWARRAQLMSAFSYYVSRDYSKAIQSAQR 104 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +++ +P +K+ Y YYL+ +SY + I DV DQ+ T+ L + + R+ S Y AR Sbjct: 105 FLSIHPGNKDAPYAYYLIALSYYEQISDVQRDQKITEQALVALREVERRFPQSEYAADAR 164 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + R+ LA KE++IGR+Y K G++ AA RFQ V+ NY HA EA+ RL E +A Sbjct: 165 LKIDLVRDHLAGKEMDIGRFYEKSGKWTAAQIRFQNVVENYQTTSHAAEALYRLTETSLA 224 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 L + EA++ +++ YP W Sbjct: 225 LGIPQEAKKYAAVLGANYPGSEW 247 >gi|77462668|ref|YP_352172.1| putative ComL lipoprotein [Rhodobacter sphaeroides 2.4.1] gi|77387086|gb|ABA78271.1| Putative ComL lipoprotein [Rhodobacter sphaeroides 2.4.1] Length = 278 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 77/230 (33%), Positives = 126/230 (54%), Gaps = 5/230 (2%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVR-YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 ++ V + G S ++ L++ T + YQR YE +A YF++ R + Sbjct: 12 ALCVALMAGCGGGSQKEPPLENFTAEQIYQRGEYE----LEARTKPDRAIRYFSEVERLY 67 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 P+ A+++L+M A+ + A Y++A + ++ YP ++ Y YL+ +SY I + Sbjct: 68 PYTEWAKRALIMQAYSYHKAKDYEEARGAAQRFLDFYPGDEDAAYAQYLLALSYYDQIDE 127 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 V DQ T LQ + ++E Y S Y + A + + LAAKE+EIGRYYLKRG Y Sbjct: 128 VGRDQGLTFQALQALRVVIEDYPESEYAQSAILKFDLAFDHLAAKEMEIGRYYLKRGHYT 187 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 AAI RF+ V+ ++ H EA+ RLVE+Y+AL L++EA+ +++ Y Sbjct: 188 AAINRFRTVVEDFQTTTHTAEALHRLVESYLALGLVNEAQTAGAILGHNY 237 >gi|110680523|ref|YP_683530.1| competence lipoprotein ComL, putative [Roseobacter denitrificans OCh 114] gi|109456639|gb|ABG32844.1| competence lipoprotein ComL, putative [Roseobacter denitrificans OCh 114] Length = 288 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 112/204 (54%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +++E+ L A YF + R +P++ AR++L+M AF + Y + S + Sbjct: 49 QIFERGEFELTRNRPDDAAFYFAEIERLYPYSDWARRALIMQAFSYHQDQDYPNSRSAAQ 108 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +I YP+ + Y YL+ +SY I +V DQ T LQ + + +ERY +S Y + + Sbjct: 109 RFIDFYPDDDDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQALRQTIERYPDSEYARSS 168 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LA KE+EIGRYYL+R + AAI RF++V+ ++ H EA+ RLVEAY+ Sbjct: 169 ILKFDLAFDHLAGKEMEIGRYYLRRDHFAAAINRFRVVVEDFQTTSHTPEALHRLVEAYL 228 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 +L L D+A+ +++ Y W Sbjct: 229 SLGLTDQAQTAAAILGYNYQSTVW 252 >gi|260434236|ref|ZP_05788207.1| tetratricopeptide TPR_2 repeat protein [Silicibacter lacuscaerulensis ITI-1157] gi|260418064|gb|EEX11323.1| tetratricopeptide TPR_2 repeat protein [Silicibacter lacuscaerulensis ITI-1157] Length = 287 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 115/204 (56%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +++ + L + A YF++ R +P++ A++SL+M AF +S Y+++ + + Sbjct: 48 QIFTRGEFELSQNRPEDAAWYFSEVERLYPYSDWAKRSLIMQAFAFHSDKNYEESRAAAQ 107 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 YI YP ++ Y YL+ +SY I +V DQ T LQ + ++E Y +S Y A Sbjct: 108 RYIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQALRTVIEVYPDSEYATSA 167 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LA KE+EIGRYYL++ Y AAI RF++V+ ++ H EA+ RL+EAY+ Sbjct: 168 VLKFDLAFDHLAGKEMEIGRYYLRQDHYAAAINRFRVVVEDFQTTTHTAEALYRLIEAYL 227 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 AL L+DEA+ +++ Y W Sbjct: 228 ALGLVDEAQSAGAILGYNYQSSEW 251 >gi|85703757|ref|ZP_01034861.1| Putative ComL lipoprotein [Roseovarius sp. 217] gi|85672685|gb|EAQ27542.1| Putative ComL lipoprotein [Roseovarius sp. 217] Length = 265 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 120/205 (58%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++++E+ L +++ A F + R +P++ +A+++++M AF + A +Y+++ + Sbjct: 25 QQIFERGEYDLAQRDPELAATSFAEVERLYPYSDLAKRAVIMQAFAHHQAKEYEESRAAA 84 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + +I YP ++ Y YL+ +SY I +V DQ T LQ + ++ERY +S Y Sbjct: 85 QRFIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQSLREVIERYPDSEYANA 144 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A + + LA+KE+EIGRYYLKR + AA RF++V+ ++ H EA+ RLVE+Y Sbjct: 145 AILKFDLAFDHLASKEMEIGRYYLKRDNFAAAANRFRVVVEDFQTTTHTAEALHRLVESY 204 Query: 238 VALALMDEAREVVSLIQERYPQGYW 262 ++L L++EAR +++ + W Sbjct: 205 LSLGLVNEARTAGAILGHNFQGTDW 229 >gi|51473383|ref|YP_067140.1| lipoprotein [Rickettsia typhi str. Wilmington] gi|51459695|gb|AAU03658.1| probable lipoprotein [Rickettsia typhi str. Wilmington] Length = 251 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 76/248 (30%), Positives = 131/248 (52%), Gaps = 7/248 (2%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L+ F I + +++S D+ + T +Y + ++ L ++ + KA E F + Sbjct: 7 LSAFLVIGLILSGCKSKKNSNDIVVPIAT-------LYNEGIILLDKKKYKKAAEEFGKI 59 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 P + ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL +SY Sbjct: 60 FYQHPGNEMTPQAELMQAYALFLAAQYEEAVDILDMFINLHPANVDIAYAYYLKALSYYM 119 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 +I DV +DQ T L ++ ++ N+ Y A + + + LA KE+ IGR+YLK+ Sbjct: 120 LISDVNHDQSRTFLSKDSFEDVITKFPNTKYAIDASLKIDLVNDHLAGKEMMIGRFYLKK 179 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 +AAI RF+ V+ NY H+ EA+ RLVE+Y+ L L DEA++ S++ YP W Sbjct: 180 KNPIAAINRFEEVIDNYQTTYHSVEALYRLVESYMMLGLHDEAKKYASVLGYNYPDSKWY 239 Query: 264 RYVETLVK 271 Y LVK Sbjct: 240 SYAYRLVK 247 >gi|99080532|ref|YP_612686.1| competence lipoprotein ComL, putative [Ruegeria sp. TM1040] gi|99036812|gb|ABF63424.1| competence lipoprotein ComL putative [Ruegeria sp. TM1040] Length = 283 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 111/204 (54%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++YE+ L A +F++ R +P++ A++SL+M AF + A Y+ + S + Sbjct: 44 QIYERGEFELARSREKDAAYFFSEVERLYPYSEWAKQSLIMQAFTYHQAEDYENSRSAAQ 103 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 YI YP + Y YL+ +SY I +V DQ T LQ + ++E Y S Y A Sbjct: 104 RYIDFYPTDADAAYAQYLLALSYYDQIDEVGRDQGLTFQALQALRTVIEVYPESEYASSA 163 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LA KE+EIGRYYLKR Y AAI RF++V+ ++ H EA+ RL+EAY+ Sbjct: 164 ILKFDLAFDHLAGKEMEIGRYYLKRQHYSAAINRFRVVVEDFQTTSHTAEALYRLIEAYL 223 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 +L L DEA+ +++ + W Sbjct: 224 SLGLTDEAQSAGAILGHNFQSTDW 247 >gi|94497005|ref|ZP_01303579.1| DNA uptake lipoprotein [Sphingomonas sp. SKA58] gi|94423681|gb|EAT08708.1| DNA uptake lipoprotein [Sphingomonas sp. SKA58] Length = 266 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 74/240 (30%), Positives = 123/240 (51%), Gaps = 3/240 (1%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A T IA L G ++ L DV +Y L + A F++ Sbjct: 15 AATALVLIASPVLTGCSTSKNKADTLYVARDVS---TLYNSGKDRLDRGQYKLAAALFDE 71 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 R P++ AR++ LMSAF Y Y ++ S + +++ + +K+ Y YYL+ + Y Sbjct: 72 VERQHPYSPWARRAQLMSAFSYYMNRDYAESISAAQRFLSIHTGNKDAPYAYYLIAICYY 131 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + I DV DQ+ T+ L + ++ RY + Y AR V + + LA KE+E+GR+Y + Sbjct: 132 EQIADVTRDQKITQQALDSLGELIRRYPQTRYAADARLKVDLVNDHLAGKEMEVGRFYQR 191 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 RG+++AA RF+ V+ Y H EA+ RLVE+Y++L + EA++ +++ YP W Sbjct: 192 RGQWLAATLRFRTVIDKYQTTTHTPEALERLVESYLSLGIPAEAQKAAAVLGRNYPGTKW 251 >gi|56696099|ref|YP_166453.1| competence lipoprotein ComL, putative [Ruegeria pomeroyi DSS-3] gi|56677836|gb|AAV94502.1| competence lipoprotein ComL, putative [Ruegeria pomeroyi DSS-3] Length = 284 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 75/230 (32%), Positives = 122/230 (53%), Gaps = 4/230 (1%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 C G+ + R LD T +++E+ L + A YF++ R +P++ Sbjct: 23 CGGGGFRTAADRSQNLDGYT----PEQIFERGEYELSAKRTEDAAYYFSEVERLYPYSNW 78 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A+++L+M AF +S Y ++ + + YI YP ++ Y YL+ +SY I +V DQ Sbjct: 79 AKRALIMQAFAYHSGKDYPESRAAAQRYIDFYPADEDAAYAQYLLALSYYDQIDEVGRDQ 138 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 T LQ + ++E Y +S Y A + + LAAKE+EIGRYYL+R + AAI R Sbjct: 139 GLTFQALQALRTVIEVYPDSEYATSAILKFDLAFDHLAAKEMEIGRYYLRRQHFSAAINR 198 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 F++V+ ++ H EA+ RLVEAY++L L EA+ +++ Y W Sbjct: 199 FRVVVEDFQTTTHTAEALHRLVEAYLSLGLEAEAQTAGAILGHNYQSSEW 248 >gi|118590884|ref|ZP_01548284.1| putative lipoprotein [Stappia aggregata IAM 12614] gi|118436406|gb|EAV43047.1| putative lipoprotein [Stappia aggregata IAM 12614] Length = 270 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 60/183 (32%), Positives = 108/183 (59%) Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F + + +P++ ++KSL+ AF+ YS GKY + + + ++T YP ++ Y+ YL G Sbjct: 58 FEELDKLYPYSEYSKKSLVNLAFLNYSRGKYTETVTAAKRFVTLYPGDEDSAYMLYLAGQ 117 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 +Y + + D+ DQ T+ + +++R+ S YV A + + +QL KE+++GR+ Sbjct: 118 AYFRQMPDITRDQAVTRKAAGAFNELIQRFPESEYVPDAESKLRIVHDQLGGKEMQVGRF 177 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YL++ Y+A I RF+ V+ +Y H EEA+ RL EAY AL +++EA+ +++ YP Sbjct: 178 YLQKRNYIAGINRFKTVVVDYQTTRHVEEALFRLTEAYYALGVVNEAQTAAAVLGHNYPD 237 Query: 260 GYW 262 W Sbjct: 238 SQW 240 >gi|126461561|ref|YP_001042675.1| TPR repeat-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|221638526|ref|YP_002524788.1| hypothetical protein RSKD131_0427 [Rhodobacter sphaeroides KD131] gi|332557550|ref|ZP_08411872.1| Tetratricopeptide TPR_2 repeat protein precursor [Rhodobacter sphaeroides WS8N] gi|126103225|gb|ABN75903.1| Tetratricopeptide TPR_2 repeat protein [Rhodobacter sphaeroides ATCC 17029] gi|221159307|gb|ACM00287.1| Tetratricopeptide TPR_2 repeat protein precursor [Rhodobacter sphaeroides KD131] gi|332275262|gb|EGJ20577.1| Tetratricopeptide TPR_2 repeat protein precursor [Rhodobacter sphaeroides WS8N] Length = 278 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 77/230 (33%), Positives = 126/230 (54%), Gaps = 5/230 (2%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVR-YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 ++ V + G S ++ L++ T + YQR YE +A YF++ R + Sbjct: 12 ALCVALVAGCGGGSQKEPPLENFTAEQIYQRGEYE----LEARTKPDRAIRYFSEVERLY 67 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 P+ A+++L+M A+ + A Y++A + ++ YP ++ Y YL+ +SY I + Sbjct: 68 PYTEWAKRALIMQAYSYHKAKDYEEARGAAQRFLDFYPGDEDAAYAQYLLALSYYDQIDE 127 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 V DQ T LQ + ++E Y S Y + A + + LAAKE+EIGRYYLKRG Y Sbjct: 128 VGRDQGLTFQALQALRVVIEDYPESEYAQSAILKFDLAFDHLAAKEMEIGRYYLKRGHYT 187 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 AAI RF+ V+ ++ H EA+ RLVE+Y+AL L++EA+ +++ Y Sbjct: 188 AAINRFRTVVEDFQTTTHTAEALHRLVESYLALGLVNEAQTAGAILGHNY 237 >gi|315498683|ref|YP_004087487.1| outer membrane assembly lipoprotein yfio [Asticcacaulis excentricus CB 48] gi|315416695|gb|ADU13336.1| outer membrane assembly lipoprotein YfiO [Asticcacaulis excentricus CB 48] Length = 302 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 123/226 (54%), Gaps = 5/226 (2%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G +Q +R VY + + +Y + L E+++++A +YF + R P++ +R+S Sbjct: 36 GKPKQRTRLVYEERPVEA-----LYNTGMQRLDEKSWNEAVDYFEEVERQHPYSEWSRRS 90 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 ++M + Y A Y ++ + E +I YP S Y YY+ ++Y + I DV DQ T+ Sbjct: 91 IIMEIYAHYQANDYNESTAAAERFIKLYPGSPLTPYAYYMRAINYFEQIVDVGRDQAYTE 150 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Y+ IV+RY + Y + A+ + + +QLA KE+EIGR+YL + + +AAI RF+ V Sbjct: 151 TAQAYLREIVQRYPGTEYARDAQVKLDMVYDQLAGKEMEIGRFYLAQNQPLAAIGRFKTV 210 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + Y H EA+ RLVEA + + + DEA +++ Y W Sbjct: 211 ITRYQTTSHTPEALYRLVEANLMMGITDEANRNAAVLGYNYAGDRW 256 >gi|255263345|ref|ZP_05342687.1| tetratricopeptide TPR_2 repeat protein [Thalassiobium sp. R2A62] gi|255105680|gb|EET48354.1| tetratricopeptide TPR_2 repeat protein [Thalassiobium sp. R2A62] Length = 284 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 112/204 (54%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E++++ L A YF + R +P++ A+++L+M AF + Y + S + Sbjct: 45 EIFQRGEFELNRGREDDAAFYFGEIERLYPYSEWAKRALIMQAFAYHKDRDYPNSRSSAQ 104 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +I YP ++ Y YL+ +SY I ++ DQ T LQ + ++ERY +S Y + + Sbjct: 105 RFIDFYPADEDAAYAQYLLALSYYDQIDEIGRDQGLTFQALQALRTVIERYPDSEYARSS 164 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LAAKE+EIGRYY++ G Y A+I RF+ V+ ++ H EA+ RLVEAY+ Sbjct: 165 ILKFDLAFDHLAAKEMEIGRYYIQDGHYAASINRFRTVVEDFQTTSHTPEALHRLVEAYL 224 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 +L L DEA+ +++ Y W Sbjct: 225 SLGLTDEAQTAGAILGHNYQSTEW 248 >gi|89055239|ref|YP_510690.1| competence lipoprotein ComL, putative [Jannaschia sp. CCS1] gi|88864788|gb|ABD55665.1| competence lipoprotein ComL putative [Jannaschia sp. CCS1] Length = 302 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 70/194 (36%), Positives = 111/194 (57%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y++A L+ A E F + R P++ A ++L+M+AF + G Y+ A + Sbjct: 64 IYQQAEFELERGRADNAAELFIEVERLHPYSAWAERALIMAAFAYHEDGDYEAARVAAQR 123 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 Y+ YP +++ Y YL+ +SY I V DQ T LQ + ++ERY +S YV+ A Sbjct: 124 YLDFYPGNEDAAYAQYLLALSYYDQIDQVGRDQGVTFQALQALRVVIERYPDSDYVQDAI 183 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + LA KE+E+GRYYL+R Y +AI RF++V+ + H EA+ RLVEAY+A Sbjct: 184 LRFDLAFDHLAGKEMEVGRYYLRREHYTSAINRFRVVVEEFQTTSHTPEALLRLVEAYLA 243 Query: 240 LALMDEAREVVSLI 253 L L DEA+ +++ Sbjct: 244 LGLTDEAQTAGAIL 257 >gi|91205917|ref|YP_538272.1| DNA uptake lipoprotein [Rickettsia bellii RML369-C] gi|157826722|ref|YP_001495786.1| DNA uptake lipoprotein [Rickettsia bellii OSU 85-389] gi|91069461|gb|ABE05183.1| DNA uptake lipoprotein [Rickettsia bellii RML369-C] gi|157802026|gb|ABV78749.1| DNA uptake lipoprotein [Rickettsia bellii OSU 85-389] Length = 253 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 77/251 (30%), Positives = 127/251 (50%), Gaps = 9/251 (3%) Query: 24 LTIFFSIAVCF---LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 L S +C L G + + S D D VT + +Y + V L+++ + A E F Sbjct: 3 LAKILSALLCLGLILNGCKSKKSND---DLVTPIS---TLYNEGVTLLEKKKYKNAAEEF 56 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + P ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL +S Sbjct: 57 EKIFYQHPGNEFTPQAELMQAYSLFLAAQYEEAVDVLDIFINLHPANVDIAYAYYLKALS 116 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 Y +I DV +DQ T L ++ ++ N+ Y + + + + LA KE+ IGR+Y Sbjct: 117 YYMLISDVNHDQSRTFLAKDSFEDLITKFPNTKYAIDSSLKIDLVNDHLAGKELTIGRFY 176 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 LK+ +AAI RF+ V+ NY H EA+ RL E+Y+ L L DEA + S++ YP Sbjct: 177 LKKKNPMAAINRFEEVVENYQTTSHCVEALYRLTESYMMLGLSDEAMKYASVLGHNYPDS 236 Query: 261 YWARYVETLVK 271 W Y L+K Sbjct: 237 KWYSYAYKLIK 247 >gi|126729262|ref|ZP_01745076.1| competence lipoprotein ComL, putative [Sagittula stellata E-37] gi|126710252|gb|EBA09304.1| competence lipoprotein ComL, putative [Sagittula stellata E-37] Length = 265 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 114/205 (55%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +++YE+ + +++ YF + R +P++ A+++L+M A+ + Y+ A Sbjct: 25 KQIYERGEYEMSRKDYEDGAFYFGEVERLYPYSDWAKRALIMQAYSYHKNKDYENARGAA 84 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + YI YP + Y YL+ +SY I V DQ T LQ + ++ERY +S Y + Sbjct: 85 QRYIDFYPSDDDAAYAQYLLALSYYDQIELVGRDQGLTFQALQALRAVIERYPDSEYARS 144 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 + + + LA KE+EIGRYYLKR + AAI RF++V+ ++ H EA+ RLVEAY Sbjct: 145 SILKFDLAFDHLAGKEMEIGRYYLKRDHFGAAISRFRVVVEDFQTTTHTPEALHRLVEAY 204 Query: 238 VALALMDEAREVVSLIQERYPQGYW 262 ++L L++EA+ +++ Y W Sbjct: 205 LSLGLVEEAQTAAAILGYNYQSTEW 229 >gi|312114836|ref|YP_004012432.1| outer membrane assembly lipoprotein YfiO [Rhodomicrobium vannielii ATCC 17100] gi|311219965|gb|ADP71333.1| outer membrane assembly lipoprotein YfiO [Rhodomicrobium vannielii ATCC 17100] Length = 287 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 73/241 (30%), Positives = 127/241 (52%), Gaps = 4/241 (1%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 A T+ S+ C +G SS LD R ++Y++A L + +KA E F Sbjct: 15 LATTLSSSLGGCGSMGSMFSSSESTQLDQ----RPPDQIYKEADDLLGQGKNNKAAELFE 70 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + + +P++ A+KS LM+A+ AGK +A + +++ +P SK ++ SY Sbjct: 71 RIDQLYPYSEEAKKSTLMAAYAYQKAGKGPEAVAAARRFLSLHPGSKEAALAQEIIASSY 130 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + I DQ TK + + ++ RY +S Y + A+ + + R+ LAA E+ +GRY+ Sbjct: 131 FERISGPTRDQGETKKAIAELETLISRYPDSRYSEDAKRRIKLARDTLAASEMNVGRYWQ 190 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 K+G Y+ A+ RF+ V+ Y H EEA+ RL E Y+AL +++EA+ +++ +P Sbjct: 191 KKGNYLGAVNRFKTVVTEYQQTTHVEEALMRLTECYMALGIVNEAQTAAAVLGHNFPDSP 250 Query: 262 W 262 W Sbjct: 251 W 251 >gi|307293329|ref|ZP_07573175.1| outer membrane assembly lipoprotein YfiO [Sphingobium chlorophenolicum L-1] gi|306881395|gb|EFN12611.1| outer membrane assembly lipoprotein YfiO [Sphingobium chlorophenolicum L-1] Length = 261 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 61/183 (33%), Positives = 107/183 (58%) Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F++ R P++ AR++ LMSAF Y Y ++ + +++ + +K+ Y YYL+ + Sbjct: 64 FDEVERQHPYSPWARRAQLMSAFSYYMNKDYPESIGASQRFLSIHTGNKDAPYAYYLIAL 123 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y + I DV DQ+ T+ L + ++ RY ++ Y AR + + + LA KE+EIGR+ Sbjct: 124 CYYEQIADVTRDQKVTQQALDALGELIRRYPDTRYAADARLKLDLVNDHLAGKEMEIGRF 183 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y +RG+++AA RF+ V+ Y H EA+ RLVE+Y++L + EA++ +++ YP Sbjct: 184 YQRRGQWLAATLRFRTVIDKYQTTTHTPEALERLVESYLSLGIPAEAQKAAAVLGRNYPG 243 Query: 260 GYW 262 W Sbjct: 244 SKW 246 >gi|149914537|ref|ZP_01903067.1| competence lipoprotein ComL, putative [Roseobacter sp. AzwK-3b] gi|149811330|gb|EDM71165.1| competence lipoprotein ComL, putative [Roseobacter sp. AzwK-3b] Length = 282 Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 116/204 (56%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +++E+A L + A E F + R +P++ A+++L+M AF + A Y+ + + + Sbjct: 43 QIFERAEYDLSRNDPDLAAEVFGEVERLYPYSEWAKRALIMQAFSYHQAEDYENSRASAQ 102 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +I YP ++ Y YL+ +SY I +V DQ T LQ + ++ER+ +S Y + + Sbjct: 103 RFIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQSLREVIERHPDSEYAQSS 162 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LAAKE+EIGRYYL+ + AAI RF++V+ ++ H EA+ RLVEAY+ Sbjct: 163 VLKFDLAFDHLAAKEMEIGRYYLRGDHFSAAINRFRVVVEDFQTTSHTAEALHRLVEAYL 222 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 +L L DEAR +++ + W Sbjct: 223 SLGLTDEARTAGAILGYNFRGTQW 246 >gi|149201858|ref|ZP_01878832.1| Putative ComL lipoprotein [Roseovarius sp. TM1035] gi|149144906|gb|EDM32935.1| Putative ComL lipoprotein [Roseovarius sp. TM1035] Length = 265 Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 119/205 (58%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++++E+ L +++ A + F + R +P++ +A+++++M AF + Y+++ + Sbjct: 25 QQIFERGEYDLAQRDPDLAAKSFAEVERLYPYSDLAKRAVIMQAFAHHQDKAYEESRAAA 84 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + +I YP ++ Y YL+ +SY I +V DQ T LQ + ++ERY +S Y Sbjct: 85 QRFIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQSLREVIERYPDSEYANS 144 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A + + LA+KE+EIGRYYLKR + AA RF++V+ ++ H EA+ RLVE+Y Sbjct: 145 AILKFDLAFDHLASKEMEIGRYYLKRDNFAAAANRFRVVVEDFQTTTHTAEALHRLVESY 204 Query: 238 VALALMDEAREVVSLIQERYPQGYW 262 ++L L++EAR +++ + W Sbjct: 205 LSLGLVNEARTAGAILGHNFQGTDW 229 >gi|294011614|ref|YP_003545074.1| putative lipoprotein [Sphingobium japonicum UT26S] gi|292674944|dbj|BAI96462.1| putative lipoprotein [Sphingobium japonicum UT26S] Length = 261 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 61/183 (33%), Positives = 107/183 (58%) Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F++ R P++ AR++ LMSAF Y Y ++ + +++ + +K+ Y YYL+ + Sbjct: 64 FDEVERQHPYSPWARRAQLMSAFSYYMNQDYPESIGAAQRFLSIHTGNKDAPYAYYLIAL 123 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y + I DV DQ+ T+ L + ++ RY ++ Y AR + + + LA KE+EIGR+ Sbjct: 124 CYYEQIADVTRDQKITQQALDALGELIRRYPDTRYAADARLKLDLVNDHLAGKEMEIGRF 183 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y +RG+++AA RF+ V+ Y H EA+ RLVE+Y++L + EA++ +++ YP Sbjct: 184 YQRRGQWLAATLRFRTVIDKYQTTTHTPEALERLVESYLSLGIPAEAQKAAAVLGRNYPG 243 Query: 260 GYW 262 W Sbjct: 244 SKW 246 >gi|260426152|ref|ZP_05780131.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45] gi|260420644|gb|EEX13895.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45] Length = 286 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 116/204 (56%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +++E+ L ++ +A YF + R +P++ ++++L+M A+ + Y+ + S + Sbjct: 45 QIFERGEYELDRKDGERAAYYFGEVERLYPYSDWSKRALIMQAYAYHLEKDYENSRSSAQ 104 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 YI YP + Y YL+ +SY I +V DQ T LQ + ++ERY +S Y + + Sbjct: 105 RYIDFYPTDDDAAYAQYLLALSYYDQIEEVGRDQGLTFQALQALRTVIERYPDSEYARSS 164 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LAAKE+EIGRYYL+R Y AAI RF+ V+ ++ H EA+ RLVEAY+ Sbjct: 165 ILKFDLAFDHLAAKEMEIGRYYLRRQHYGAAINRFRSVVEDFQTTTHTPEALHRLVEAYL 224 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 +L L++EA+ +++ Y W Sbjct: 225 SLGLVNEAQTAGAILGYNYQGTVW 248 >gi|56552654|ref|YP_163493.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp. mobilis ZM4] gi|4378163|gb|AAD19408.1| unknown [Zymomonas mobilis subsp. mobilis ZM4] gi|56544228|gb|AAV90382.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp. mobilis ZM4] Length = 346 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 116/215 (53%), Gaps = 4/215 (1%) Query: 52 TDVRY-QREV---YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 TD RY R+V Y L + A +F++ R P++ AR++ LMSAF Y A Sbjct: 32 TDTRYVARDVDTLYNAGKQSLDSGQYKAAAAFFDEVERQHPYSIWARRAQLMSAFCNYRA 91 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 Y + + + +++ + +K+ Y YLV M Y + I+DV +DQ T+L L M+ I+ Sbjct: 92 RNYSASIASAQRFLSIHTGNKDAPYAMYLVMMDYYEQIQDVNHDQHTTQLALDSMNDIIR 151 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 RY ++PY AR + + + L KE+ IGR+Y + ++AA RF+ V+ Y + Sbjct: 152 RYPDTPYAADARLKMDLVHDHLGGKEMAIGRFYEQSRLWLAATLRFRRVIDEYQTTTYVP 211 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 EA+ RL E+Y+AL L EAR +++ +P W Sbjct: 212 EALERLTESYLALGLRAEARNAAAVLGANFPGSKW 246 >gi|332188478|ref|ZP_08390200.1| hypothetical protein SUS17_3597 [Sphingomonas sp. S17] gi|332011490|gb|EGI53573.1| hypothetical protein SUS17_3597 [Sphingomonas sp. S17] Length = 311 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 67/203 (33%), Positives = 110/203 (54%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y A L + + +A F++ R P++ AR++ LMSAF Y Y Q+ + Sbjct: 43 LYTAAKQRLDQHRYKEAALLFDEVERQHPYSIWARRAQLMSAFSYYLGRDYTQSIQSAQR 102 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 ++ +P +++ Y YYL+ + Y + I+DV DQ+ T+ L + ++ RY N+ Y AR Sbjct: 103 FLAVHPGNRDAPYAYYLIALGYYEQIQDVTRDQKITRQALDALGELMRRYPNTRYAADAR 162 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 V + + LA KE+EIGR+Y R +++AA RF+ V+ Y H EA+ RL E Y+A Sbjct: 163 LKVDLVNDHLAGKEMEIGRFYEDRHQWLAASMRFRTVVDKYQTTSHTPEALMRLTETYLA 222 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 L + EA +++ YP W Sbjct: 223 LGVRPEAERAAAVLGANYPGSDW 245 >gi|163738728|ref|ZP_02146142.1| competence lipoprotein ComL, putative [Phaeobacter gallaeciensis BS107] gi|161388056|gb|EDQ12411.1| competence lipoprotein ComL, putative [Phaeobacter gallaeciensis BS107] Length = 282 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 115/204 (56%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++YE+ ++ A YF++ R +P++ A+++L+M A+ + Y+ + + + Sbjct: 43 QIYERGEFEMERNRTEDAAFYFSEIERLYPYSSWAKQALIMQAYAYHLGRDYEDSRAAAQ 102 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 YI YP ++ Y YL+ +SY I +V DQ T LQ + ++E Y +S Y A Sbjct: 103 RYIDFYPTEEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQSLRTVIEVYPDSEYASSA 162 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LA KE+EIGRYYL++G Y +A+ RF++V+ ++ H EA+ RLVEAY+ Sbjct: 163 ILKFDLAFDHLAGKEMEIGRYYLRKGHYTSAVNRFRVVVEDFQTTTHTAEALHRLVEAYL 222 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 +L L++EA+ +++ Y W Sbjct: 223 SLGLVNEAQTAGAILGHNYQSTEW 246 >gi|254474921|ref|ZP_05088307.1| lipoprotein [Ruegeria sp. R11] gi|214029164|gb|EEB69999.1| lipoprotein [Ruegeria sp. R11] Length = 282 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 115/204 (56%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++YE+ ++ A YF + R +P++ A+++L+M A+ + Y+++ + + Sbjct: 43 QIYERGEFEMERNRTKDAAFYFAEIERLYPYSSWAKQALIMQAYAYHLGRDYEESRAAAQ 102 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 YI YP ++ Y YL+ +SY I +V DQ T LQ + ++E Y +S Y A Sbjct: 103 RYIDFYPTEEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQSLRTVIEVYPDSEYANSA 162 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LA KE+EIGRYYL++G Y +A+ RF++V+ ++ H EA+ RLVEAY+ Sbjct: 163 ILKFDLAFDHLAGKEMEIGRYYLRKGHYTSAVNRFRVVVEDFQTTTHTAEALHRLVEAYL 222 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 +L L++EA+ +++ Y W Sbjct: 223 SLGLVNEAQTAGAILGHNYQSTEW 246 >gi|114766759|ref|ZP_01445696.1| competence lipoprotein ComL, putative [Pelagibaca bermudensis HTCC2601] gi|114541016|gb|EAU44073.1| competence lipoprotein ComL, putative [Roseovarius sp. HTCC2601] Length = 275 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 121/213 (56%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +++YE+ L ++ +A YF++ R +P++ ++++L+M A+ ++ Y+ + S Sbjct: 35 QQIYERGEYELDRRDGEQAAYYFSEVERLYPYSEWSKRALIMQAYAFHTEKDYENSRSSA 94 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + YI YP ++ Y YL+ +SY I +V DQ T LQ + ++ERY S Y + Sbjct: 95 QRYIDFYPTDEDAAYAQYLLALSYYDQIEEVGRDQGLTFQALQALRTVIERYPESEYARS 154 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 + + + LA KE+EIGRYYL+ + AAI RF++V+ ++ H EA+ RLVEAY Sbjct: 155 SILKFDLAFDHLAGKEMEIGRYYLRDKHFGAAISRFRVVVEDFQTTTHTPEALHRLVEAY 214 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLV 270 ++L L+ EA+ +++ Y W R TL+ Sbjct: 215 LSLGLVQEAQSAGAILGYNYQGSEWYRDSYTLL 247 >gi|88657674|ref|YP_507792.1| putative competence protein ComL [Ehrlichia chaffeensis str. Arkansas] gi|88599131|gb|ABD44600.1| putative competence protein ComL [Ehrlichia chaffeensis str. Arkansas] Length = 250 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 73/217 (33%), Positives = 119/217 (54%), Gaps = 2/217 (0%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 R E+YE A+ + + A + + +PF+ VA K+ LM +F+ Y G Y +A Sbjct: 36 RTADEMYESALKKSNAKEYKSAVKDLEEIDNLYPFSPVAIKARLMMSFLNYELGDYSRAE 95 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 ++YI YP+SK++D+ YYL M+ I D+ DQ + +L+ ++ + + NS Y Sbjct: 96 IYADDYIQLYPDSKDIDFAYYLRIMANYMQISDIDRDQSSVHKVLELLNEFIRLFPNSMY 155 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 ++ + + +A KE IG++YL+RGEYVAAI RF +L Y D ++ E++ R+ Sbjct: 156 LEEVMKRLELVHQHIAGKEFSIGKFYLQRGEYVAAIKRFSTILNKYKDTKYYSESLYRIA 215 Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 EAY+AL + +SL++E W Y E LVK Sbjct: 216 EAYLALGDIAAYARYMSLLKECCIDTGW--YKEPLVK 250 >gi|157803367|ref|YP_001491916.1| hypothetical protein A1E_00915 [Rickettsia canadensis str. McKiel] gi|157784630|gb|ABV73131.1| hypothetical protein A1E_00915 [Rickettsia canadensis str. McKiel] Length = 247 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 76/248 (30%), Positives = 134/248 (54%), Gaps = 7/248 (2%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L++ F I + +++S DV + T +Y + ++ L+++ + KA E F + Sbjct: 7 LSVLFIIGLSLSGCKSKKNSDDVVVPIPT-------LYNEGIILLEKKKYKKAAEEFGRV 59 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 P + ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL +SY Sbjct: 60 FYQHPGNEMTPQAELMQAYSLFLATQYEEAVDVLDMFINLHPANVDIAYAYYLKALSYYM 119 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 +I DV +DQ T L I+E+++N+ Y A + + + LA KE+ +GR+YLK+ Sbjct: 120 LISDVNHDQSRTFLAKDSFKDIIEKFSNTKYAIDASLKIDLVNDHLAGKEMMVGRFYLKK 179 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 +AAI RF+ V+ +Y H+ EA+ RL E+Y+ L L DEA++ S++ YP W Sbjct: 180 KNPIAAINRFEEVINHYQTTSHSVEALYRLAESYMMLGLPDEAKKYASVLGYNYPDSQWY 239 Query: 264 RYVETLVK 271 Y LVK Sbjct: 240 SYAYKLVK 247 >gi|254455886|ref|ZP_05069315.1| DNA uptake lipoprotein [Candidatus Pelagibacter sp. HTCC7211] gi|207082888|gb|EDZ60314.1| DNA uptake lipoprotein [Candidatus Pelagibacter sp. HTCC7211] Length = 283 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 115/204 (56%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E Y++ + L+ + A + FN+ FP + A KS LM+A+ Y+ Y + E Sbjct: 39 EAYQEGMKNLESGDVIYAAKKFNEAEILFPQSDWAPKSALMAAYSYYTQDYYADTIAELE 98 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 ++ YP SKN+DYVYYL+G+SY + I D D ++ +Y +++ Y N+ Y A Sbjct: 99 RFLRVYPLSKNLDYVYYLLGVSYYEQIVDEKKDLQSIIKAKKYFEILIQNYPNTNYSLDA 158 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 F + + + LAAKE+ IGRYY + +++ AI RF+ V+ NY +AEEA+ RLVE + Sbjct: 159 EFKIELVNDTLAAKEMYIGRYYFDKKKWIPAINRFKTVIDNYDTTLYAEEALHRLVEVHY 218 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 L L DEA++ +L+ Y W Sbjct: 219 ILGLKDEAKKYANLLGYNYQSSIW 242 >gi|241762104|ref|ZP_04760187.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373354|gb|EER62954.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 346 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 116/215 (53%), Gaps = 4/215 (1%) Query: 52 TDVRY-QREV---YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 TD RY R+V Y L + A +F++ R P++ AR++ LMSAF Y A Sbjct: 32 TDTRYVARDVDTLYNAGKQSLDSGQYKAAAAFFDEVERQHPYSIWARRAQLMSAFCNYRA 91 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 Y + + + +++ + +K+ Y YLV M Y + I+DV +DQ T+L L M+ I+ Sbjct: 92 RNYSASIASAQRFLSIHTGNKDAPYAMYLVMMDYYEQIQDVNHDQHTTQLALDSMNDIIR 151 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 RY ++PY AR + + + L KE+ IGR+Y + ++AA RF+ V+ Y + Sbjct: 152 RYPDTPYAADARLKMDLVHDHLGGKEMAIGRFYEQSRLWLAATLRFRRVIDEYQTTTYVP 211 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 EA+ RL E+Y+A+ L EAR +++ +P W Sbjct: 212 EALERLTESYLAMGLRVEARNAAAVLGANFPGSKW 246 >gi|260753695|ref|YP_003226588.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553058|gb|ACV76004.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 346 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 116/215 (53%), Gaps = 4/215 (1%) Query: 52 TDVRY-QREV---YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 TD RY R+V Y L + A +F++ R P++ AR++ LMSAF Y A Sbjct: 32 TDTRYVARDVDTLYNAGKQSLDSGQYKAAAAFFDEVERQHPYSIWARRAQLMSAFCNYRA 91 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 Y + + + +++ + +K+ Y YLV M Y + I+DV +DQ T+L L M+ I+ Sbjct: 92 RNYSASIASAQRFLSIHTGNKDAPYAMYLVMMDYYEQIQDVNHDQHTTQLALDSMNDIIR 151 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 RY ++PY AR + + + L KE+ IGR+Y + ++AA RF+ V+ Y + Sbjct: 152 RYPDTPYAADARLKMDLVHDHLGGKEMAIGRFYEQSRLWLAATLRFRRVIDEYQTTTYVP 211 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 EA+ RL E+Y+A+ L EAR +++ +P W Sbjct: 212 EALERLTESYLAMGLRVEARNAAAVLGANFPGSKW 246 >gi|73667425|ref|YP_303441.1| hypothetical protein Ecaj_0812 [Ehrlichia canis str. Jake] gi|72394566|gb|AAZ68843.1| protein of unknown function UPF0169 [Ehrlichia canis str. Jake] Length = 254 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 116/208 (55%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 R E+YE A+ +++ A + + +PF+ VA K+ LM +F+ Y G Y +A Sbjct: 36 RTADEMYESALKKSGIKDYKSAVKDLEEIDNLYPFSPVAIKARLMMSFLNYELGDYSRAE 95 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 ++YI YP+SK++D+ YYL M+ I D+ DQ + +L+ + V + NS Y Sbjct: 96 IYADDYIQLYPDSKDIDFAYYLRIMANYMQISDIDRDQSSVNKVLELLDEFVRLFPNSIY 155 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 ++ + + +AAKE IG++YL+RGEYVAAI RF +L Y D ++ E++ R+ Sbjct: 156 LEEVMKRLDLVHQHIAAKEFSIGKFYLQRGEYVAAIKRFSTILNKYEDTKYYSESLYRIA 215 Query: 235 EAYVALALMDEAREVVSLIQERYPQGYW 262 EAY+AL + + +SL++E W Sbjct: 216 EAYLALGDVTAYAKYMSLLKECCINTGW 243 >gi|254464035|ref|ZP_05077446.1| DNA uptake lipoprotein [Rhodobacterales bacterium Y4I] gi|206684943|gb|EDZ45425.1| DNA uptake lipoprotein [Rhodobacterales bacterium Y4I] Length = 282 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 112/204 (54%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++YE+ L + A YF + R +P++ A+++++M AF +S Y+ + + + Sbjct: 43 QIYERGEFELANRRPKDAVYYFAEIERLYPYSEWAKQAVIMQAFAYHSTRDYENSRAAAQ 102 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +I YP ++ Y YL+ +SY I +V DQ T LQ + ++E Y +S Y A Sbjct: 103 RFIDFYPADEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQALRTVIEVYPDSQYATSA 162 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LA KE+EIGRYYL+RG Y +AI RF++V+ + H EA+ RLVEAY+ Sbjct: 163 ILKFDLAFDHLAGKEMEIGRYYLRRGHYTSAINRFRVVVEEFQTTSHTPEALHRLVEAYL 222 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 +L L EA+ +++ + W Sbjct: 223 SLGLTAEAQTAAAILGHNFQSTEW 246 >gi|209545278|ref|YP_002277507.1| outer membrane assembly lipoprotein YfiO [Gluconacetobacter diazotrophicus PAl 5] gi|209532955|gb|ACI52892.1| outer membrane assembly lipoprotein YfiO [Gluconacetobacter diazotrophicus PAl 5] Length = 319 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 67/249 (26%), Positives = 128/249 (51%), Gaps = 7/249 (2%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 +L + S+A C G ++++ D+ + V +Y + L++Q ++ A F Sbjct: 24 SLALILSVAAC---GGDKKAINDM----ESHVPPVETLYNNGIDALRDQRYALAAAEFEV 76 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +++P++G + LM + Y KY A + ++ +P S + Y +YL + Y Sbjct: 77 LQQNYPYSGYVANAQLMEGYANYLQDKYADAVQQLDRFLELHPTSADAAYAFYLRALCYY 136 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + + +V DQ+ T + + ++ R+ SPY + A+ V + R+ LA KE+ +GR+Y + Sbjct: 137 EQVAEVQRDQQGTVEAMNALEEVITRFPQSPYARDAQLKVDLCRDHLAGKEMLVGRFYEE 196 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + Y A+ R+Q V+ ++ H EA+ RLVE Y+ L L D+AR S++ YP W Sbjct: 197 QRNYEGAVNRYQRVVQDFQTTNHVPEALERLVEVYLDLGLTDQARRTASVLSYNYPGSKW 256 Query: 263 ARYVETLVK 271 R+ +++ Sbjct: 257 YRFSYNMLR 265 >gi|85374273|ref|YP_458335.1| DNA uptake lipoprotein [Erythrobacter litoralis HTCC2594] gi|84787356|gb|ABC63538.1| DNA uptake lipoprotein [Erythrobacter litoralis HTCC2594] Length = 266 Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 67/203 (33%), Positives = 112/203 (55%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y A L N A F++ R P++ AR++ LMSAF Y + Y +A + Sbjct: 46 LYASAKDRLDRGNAKLAAALFDEVERQHPYSPWARRAQLMSAFSYYVSRDYTKAIQSAQR 105 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +++ +P +K+ Y YYL+ +SY + I DV DQ+ T+ L + + R+ + Y AR Sbjct: 106 FLSIHPGNKDAPYAYYLIALSYYEQISDVQRDQKVTEQALTALREVDRRFPQTEYAADAR 165 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + + LA KE+EIGR+Y + ++ AA+ RFQ V+ +Y HA EA+ RL E+ +A Sbjct: 166 LKMDLVNDHLAGKEMEIGRFYQRTAKWAAAVIRFQNVVDDYQTTSHAPEALYRLTESNLA 225 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 L + EA++ +++ YP W Sbjct: 226 LGIPTEAKKYAAVLGANYPGSEW 248 >gi|163746142|ref|ZP_02153501.1| competence lipoprotein ComL, putative [Oceanibulbus indolifex HEL-45] gi|161380887|gb|EDQ05297.1| competence lipoprotein ComL, putative [Oceanibulbus indolifex HEL-45] Length = 288 Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 111/204 (54%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +++E+ L N +A YF + R +P++ A+++L+M AF + Y + S + Sbjct: 49 QIFERGEYELTNNNPGEAAFYFAEIERLYPYSEWAKRALIMQAFAYHKDQDYPNSRSAAQ 108 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +I YP + Y YL+ +SY I +V DQ T LQ + ++E Y +S Y + A Sbjct: 109 RFIDFYPAEDDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQSLRAVIEGYPDSEYARSA 168 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LA KE+EIGRYYL+R Y AAI RF++V+ ++ H EA+ RLVE+Y+ Sbjct: 169 ILKFDLAFDHLAGKEMEIGRYYLRRDHYTAAINRFRVVVEDFQTTTHTAEALHRLVESYL 228 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 +L L EA+ +++ Y W Sbjct: 229 SLGLDKEAQTAGAILGHNYRGSEW 252 >gi|254511506|ref|ZP_05123573.1| tetratricopeptide TPR_2 repeat protein [Rhodobacteraceae bacterium KLH11] gi|221535217|gb|EEE38205.1| tetratricopeptide TPR_2 repeat protein [Rhodobacteraceae bacterium KLH11] Length = 286 Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 114/204 (55%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +++ + L + A YF++ R +P++ A+++L+M AF ++ Y ++ + + Sbjct: 47 QIFTRGEYELSQDRSDDAAWYFSEVERLYPYSDWAKRALIMQAFSYHNDKNYAESRAAAQ 106 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 YI YP ++ Y YL+ +SY I +V DQ T LQ + ++E Y +S Y A Sbjct: 107 RYIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQALRTVIEVYPDSEYATSA 166 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LA KE+EIGRYYL++ + AAI RF++V+ ++ H EA+ RL+EAY+ Sbjct: 167 VLKFDLAFDHLAGKEMEIGRYYLRQDHFTAAINRFRVVVEDFQTTSHTAEALYRLIEAYL 226 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 AL L+DEA+ +++ Y W Sbjct: 227 ALGLVDEAQTAGAILGYNYQSSEW 250 >gi|114771762|ref|ZP_01449155.1| competence lipoprotein ComL, putative [alpha proteobacterium HTCC2255] gi|114547578|gb|EAU50469.1| competence lipoprotein ComL, putative [alpha proteobacterium HTCC2255] Length = 230 Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 64/189 (33%), Positives = 104/189 (55%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 ++A F R +P++ A+KSLLMSA ++ Y+++ + E Y+ YP + + Sbjct: 3 AEAASLFAAVERQYPYSEWAKKSLLMSAIANHNGAFYEESRADAERYLDFYPADVDAAHA 62 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 YL+ +SY I +V DQ T LQ ++ERY NS Y + + + LA E Sbjct: 63 QYLIALSYYDQIDNVSRDQSVTFSALQAFRTVIERYPNSEYTSPSLLKFDLSLDHLAGAE 122 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +E+GRYYLKRG + AAI RF++V+ + H EA+ RLVE+Y++L L+ A+ +++ Sbjct: 123 MEVGRYYLKRGHFGAAISRFRVVVEEFETTSHTPEALHRLVESYLSLGLIANAQTTGAIL 182 Query: 254 QERYPQGYW 262 + W Sbjct: 183 GHNFQASDW 191 >gi|157828109|ref|YP_001494351.1| hypothetical protein A1G_01315 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932811|ref|YP_001649600.1| ComL family lipoprotein [Rickettsia rickettsii str. Iowa] gi|157800590|gb|ABV75843.1| hypothetical protein A1G_01315 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165907898|gb|ABY72194.1| lipoprotein, ComL family [Rickettsia rickettsii str. Iowa] Length = 251 Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 125/233 (53%), Gaps = 7/233 (3%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +++S D+ + T +Y + + L+++ + A E F + P + ++ L Sbjct: 22 NKKTSDDIVVPIAT-------LYNEGITLLEKKKYKNAAEEFGRVLYQHPGNEMTPQAEL 74 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 M A+ + A +Y++A + + +IT +P + ++ Y YYL +SY +I DV +DQ T L Sbjct: 75 MQAYSLFLAAQYEEAVDVLDMFITLHPANVDIAYAYYLKALSYYMLISDVNHDQSRTFLA 134 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++ ++ N+ Y + + + + LA KE+ +GR+YLK+ +AAI RF+ V+ Sbjct: 135 KDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAAINRFEEVID 194 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 NY H+ EA+ RL E+Y+ L L DEA++ S++ YP W Y LV+ Sbjct: 195 NYQTTSHSVEALYRLAESYMILGLPDEAKKYASVLGYNYPDSQWYSYAYRLVQ 247 >gi|162148968|ref|YP_001603429.1| hypothetical protein GDI_3198 [Gluconacetobacter diazotrophicus PAl 5] gi|161787545|emb|CAP57141.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus PAl 5] Length = 319 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 128/249 (51%), Gaps = 7/249 (2%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 +L + ++A C G ++++ D+ + V +Y + L++Q ++ A F Sbjct: 24 SLALILAVAAC---GGDKKAINDM----ESHVPPVETLYNNGIDALRDQRYALAAAEFEV 76 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +++P++G + LM + Y KY A + ++ +P S + Y +YL + Y Sbjct: 77 LQQNYPYSGYVANAQLMEGYANYLQDKYADAVQQLDRFLELHPTSADAAYAFYLRALCYY 136 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + + +V DQ+ T + + ++ R+ SPY + A+ V + R+ LA KE+ +GR+Y + Sbjct: 137 EQVAEVQRDQQGTVEAMNALEEVITRFPQSPYARDAQLKVDLCRDHLAGKEMLVGRFYEE 196 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + Y A+ R+Q V+ ++ H EA+ RLVE Y+ L L D+AR S++ YP W Sbjct: 197 QRNYEGAVNRYQRVVQDFQTTNHVPEALERLVEVYLDLGLTDQARRTASVLSYNYPGSKW 256 Query: 263 ARYVETLVK 271 R+ +++ Sbjct: 257 YRFSYNMLR 265 >gi|329115585|ref|ZP_08244307.1| UPF0169 lipoprotein [Acetobacter pomorum DM001] gi|326695013|gb|EGE46732.1| UPF0169 lipoprotein [Acetobacter pomorum DM001] Length = 345 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/259 (27%), Positives = 124/259 (47%), Gaps = 8/259 (3%) Query: 9 ICIFEAWAYQLYKFALTI--FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66 ICI + L++ S+A C L ++ L + +Y + Sbjct: 4 ICIKPQLLRHVLPHVLSVALLTSLAGCGLFNENKK------LPPAPKIAAPETLYNNGID 57 Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 L+ + ++ A F +++P++G + LM + Y GKY +A +I+ +P Sbjct: 58 ALRTRRYALAASEFETLQQNYPYSGYIANAQLMEGYAYYLKGKYPEAVQQLNRFISLHPT 117 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 S + Y YYL + + + I DV DQ+ T + + ++ R+ S Y + A+ + + R Sbjct: 118 SSDSAYAYYLRALCFYEQIADVQRDQQGTAESMDALEEVITRFPQSKYARDAQLKIDLCR 177 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 + LA KE+ +GRYY + Y AI R+Q V+ ++ H EA+ R+VE Y+ L L D+A Sbjct: 178 DHLAGKEMLVGRYYQREKNYEGAINRYQRVVQDFQTTNHVPEALERMVEVYLDLGLTDQA 237 Query: 247 REVVSLIQERYPQGYWARY 265 R+ ++ YP W RY Sbjct: 238 RKSAIVLGYNYPGSKWYRY 256 >gi|15604057|ref|NP_220572.1| hypothetical protein RP183 [Rickettsia prowazekii str. Madrid E] gi|18203676|sp|Q9ZDY1|Y183_RICPR RecName: Full=UPF0169 lipoprotein RP183; Flags: Precursor gi|3860748|emb|CAA14649.1| unknown [Rickettsia prowazekii] gi|292571778|gb|ADE29693.1| DNA uptake lipoprotein [Rickettsia prowazekii Rp22] Length = 251 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 117/212 (55%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + ++ L ++ + KA E F + P + ++ LM A+ + A +Y++A + Sbjct: 36 LYNEGIILLDKKKYKKAAEEFGKIFYQHPGNEMTPQAELMQAYSLFLAAQYEEAVDILNM 95 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I +P + ++ Y YYL +SY +I DV +DQ T L ++ ++ N+ Y + Sbjct: 96 FINLHPANIDIAYAYYLKALSYYMLISDVNHDQSRTFLSKDSFEDVITKFPNTKYAIDSS 155 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + + LA KE+ IGR+YLK+ +AAI RF+ V+ NY H+ EA+ RLVE+Y+ Sbjct: 156 LKIDLVNDHLAGKEMMIGRFYLKKKNPMAAINRFEEVIDNYQTTYHSVEALYRLVESYMM 215 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271 L L DEA++ S++ YP W Y LVK Sbjct: 216 LGLHDEAKKYTSVLGYNYPNSKWYSYAYRLVK 247 >gi|163741561|ref|ZP_02148952.1| competence lipoprotein ComL, putative [Phaeobacter gallaeciensis 2.10] gi|161385295|gb|EDQ09673.1| competence lipoprotein ComL, putative [Phaeobacter gallaeciensis 2.10] Length = 282 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 114/204 (55%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++YE+ ++ A YF++ R +P++ A+++L+M A+ + Y+ + + + Sbjct: 43 QIYERGEFEMERNRTEDAAFYFSEIERLYPYSSWAKQALIMQAYAYHLGRDYEDSRAAAQ 102 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 YI YP ++ Y YL+ +SY I +V DQ T LQ + ++E Y +S Y A Sbjct: 103 RYIDFYPTEEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQSLRTVIEVYPDSEYASSA 162 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LA KE+EIGRYYL++ Y +A+ RF++V+ ++ H EA+ RLVEAY+ Sbjct: 163 ILKFDLAFDHLAGKEMEIGRYYLRKEHYTSAVNRFRVVVEDFQTTTHTAEALHRLVEAYL 222 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 +L L++EA+ +++ Y W Sbjct: 223 SLGLVNEAQTAGAILGHNYQSTEW 246 >gi|258542978|ref|YP_003188411.1| hypothetical protein APA01_19070 [Acetobacter pasteurianus IFO 3283-01] gi|256634056|dbj|BAI00032.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01] gi|256637116|dbj|BAI03085.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03] gi|256640168|dbj|BAI06130.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07] gi|256643225|dbj|BAI09180.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22] gi|256646280|dbj|BAI12228.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26] gi|256649333|dbj|BAI15274.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32] gi|256652319|dbj|BAI18253.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655377|dbj|BAI21304.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12] Length = 345 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 67/245 (27%), Positives = 120/245 (48%), Gaps = 6/245 (2%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 ++ + S+A C L ++ L + +Y + L+ + ++ A F Sbjct: 19 LSVALLTSLAGCGLFNENKK------LPPAPKIAAPETLYNNGIDALRTRRYALAASEFE 72 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 +++P++G + LM + Y GKY +A +I+ +P S + Y YYL + + Sbjct: 73 TLQQNYPYSGYIANAQLMEGYAYYLKGKYPEAVQQLNRFISLHPTSSDSAYAYYLRALCF 132 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + I DV DQ+ T + + ++ R+ S Y + A+ + + R+ LA KE+ +GRYY Sbjct: 133 YEQIADVQRDQQGTAESMDALEEVITRFPQSKYARDAQLKIDLCRDHLAGKEMLVGRYYQ 192 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + Y AI R+Q V+ ++ H EA+ R+VE Y+ L L D+AR+ ++ YP Sbjct: 193 REKNYEGAINRYQRVVQDFQTTNHVPEALERMVEVYLDLGLTDQARKSAIVLGYNYPGSK 252 Query: 262 WARYV 266 W RY Sbjct: 253 WYRYA 257 >gi|229586426|ref|YP_002844927.1| DNA uptake lipoprotein [Rickettsia africae ESF-5] gi|228021476|gb|ACP53184.1| DNA uptake lipoprotein [Rickettsia africae ESF-5] Length = 251 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 124/233 (53%), Gaps = 7/233 (3%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +++S D+ + T +Y + + L+++ + A E F + P + ++ L Sbjct: 22 NKKNSDDIVVPIAT-------LYNEGITLLEKKKYKNAAEEFGRVLYQHPGNEMTPQAEL 74 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 M A+ + A +Y++A + + +I +P + ++ Y YYL +SY +I DV +DQ T L Sbjct: 75 MQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVNHDQSRTFLA 134 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++ ++ N+ Y + + + + LA KE+ +GR+YLK+ +AAI RF+ V+ Sbjct: 135 KDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMTVGRFYLKKKNPMAAINRFEEVID 194 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 NY H+ EA+ RL E+Y+ L L DEA++ S++ YP W Y LV+ Sbjct: 195 NYQTTSHSVEALYRLAESYMMLGLPDEAKKYASVLGYNYPDSQWYSYAYRLVQ 247 >gi|238650459|ref|YP_002916311.1| ComL family lipoprotein [Rickettsia peacockii str. Rustic] gi|238624557|gb|ACR47263.1| ComL family lipoprotein [Rickettsia peacockii str. Rustic] Length = 251 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 124/233 (53%), Gaps = 7/233 (3%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +++S D+ + T +Y + + L+++ + A E F + P + ++ L Sbjct: 22 NKKTSDDIVVPIAT-------LYNEGITLLEKKKYKNAAEEFGRVLYQHPGNEMTPQAEL 74 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 M A+ + A +Y++A + + +I +P + ++ Y YYL +SY +I DV +DQ T L Sbjct: 75 MQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVNHDQSRTFLA 134 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++ ++ N+ Y + + + + LA KE+ +GR+YLK+ +AAI RF+ V+ Sbjct: 135 KDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAAINRFEEVID 194 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 NY H+ EA+ RL E+Y+ L L DEA++ S++ YP W Y LV+ Sbjct: 195 NYQTTSHSVEALYRLAESYMILGLPDEAKKYASVLGYNYPDSQWYSYAYRLVQ 247 >gi|15892153|ref|NP_359867.1| hypothetical protein RC0230 [Rickettsia conorii str. Malish 7] gi|15619283|gb|AAL02768.1| unknown [Rickettsia conorii str. Malish 7] Length = 251 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 124/233 (53%), Gaps = 7/233 (3%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +++S D+ + T +Y + + L+++ + A E F + P + ++ L Sbjct: 22 NKKNSDDIVVPIAT-------LYNEGITLLEKKKYKNAAEEFGRVLYQHPGNEMTPQAEL 74 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 M A+ + A +Y++A + + +I +P + ++ Y YYL +SY +I DV +DQ T L Sbjct: 75 MQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVNHDQSRTFLA 134 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++ ++ N+ Y + + + + LA KE+ +GR+YLK+ +AAI RF+ V+ Sbjct: 135 KDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAAINRFEEVID 194 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 NY H+ EA+ RL E+Y+ L L DEA++ S++ YP W Y LV+ Sbjct: 195 NYQTTSHSVEALYRLAESYMMLGLSDEAKKYASVLGYNYPDSQWYSYAYRLVQ 247 >gi|34580817|ref|ZP_00142297.1| hypothetical protein [Rickettsia sibirica 246] gi|28262202|gb|EAA25706.1| unknown [Rickettsia sibirica 246] Length = 251 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 124/233 (53%), Gaps = 7/233 (3%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +++S D+ + T +Y + + L+++ + A E F + P + ++ L Sbjct: 22 NKKNSDDIVVPIAT-------LYNEGITLLEKKKYKNAAEEFGRVLYQHPGNEMTPQAEL 74 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 M A+ + A +Y++A + + +I +P + ++ Y YYL +SY +I DV +DQ T L Sbjct: 75 MQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVNHDQSRTFLA 134 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++ ++ N+ Y + + + + LA KE+ +GR+YLK+ +AAI RF+ V+ Sbjct: 135 KDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAAINRFEEVID 194 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 NY H+ EA+ RL E+Y+ L L DEA++ S++ YP W Y LV+ Sbjct: 195 NYQTTSHSVEALYRLAESYMMLGLPDEAKKYASVLGYNYPDSQWYSYAYRLVQ 247 >gi|67459480|ref|YP_247104.1| hypothetical protein RF_1088 [Rickettsia felis URRWXCal2] gi|67005013|gb|AAY61939.1| unknown [Rickettsia felis URRWXCal2] Length = 251 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 75/248 (30%), Positives = 131/248 (52%), Gaps = 7/248 (2%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L+I F I + +++S D+ + T +Y + V L+++ + KA E F + Sbjct: 7 LSILFIIGLSLSGCKSKKNSDDIVVPIPT-------LYNEGVSLLEKKKYKKAAEEFGRV 59 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 P + ++ LM + + A +Y++A + + +I +P + ++ Y YYL +SY Sbjct: 60 FYQHPGNEMTPQAELMQGYSLFLAAQYEEAVDVLDMFINLHPANVDIAYAYYLKALSYYM 119 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 +I DV +DQ T L ++ ++ N+ Y + + + + LA KE+ +GR+YLK+ Sbjct: 120 LISDVNHDQSRTFLAKDSFEDVIGKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKK 179 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 +AAI RF+ V+ NY H+ EA+ RLVE+Y+ L L DEA++ S++ YP W Sbjct: 180 KNPMAAINRFEEVIDNYQTTSHSVEALYRLVESYMMLGLADEAKKYASVLGYNYPDSQWY 239 Query: 264 RYVETLVK 271 Y LVK Sbjct: 240 SYAYKLVK 247 >gi|88606744|ref|YP_505635.1| putative competence lipoprotein ComL [Anaplasma phagocytophilum HZ] gi|88597807|gb|ABD43277.1| putative competence lipoprotein ComL [Anaplasma phagocytophilum HZ] Length = 233 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 72/204 (35%), Positives = 110/204 (53%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S V+ D D +Y++A + +++ + A N+ +PF+ VA LMSA Sbjct: 18 SGSVHADEAIDEGGVHGLYDRASVLFEKKKYKDAIAILNKIEALYPFSQVAIDGSLMSAE 77 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y G Y++AA+L E YI YP S +DY YY+ S ++ D+ D K +L+Y Sbjct: 78 ANYELGNYREAATLVEGYIGIYPNSPVIDYAYYIRIASKYMLVPDLGLDDSIAKEVLEYA 137 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + V+ + S Y+ + + RN +AAKE GR+Y+KRGEY+AAI RF ++ Y D Sbjct: 138 AEFVKMFPESEYLAPVQEKLGHLRNHVAAKEFLTGRFYMKRGEYIAAIKRFSTLVREYPD 197 Query: 223 AEHAEEAMARLVEAYVALALMDEA 246 + + +E M RL EAY A+ D A Sbjct: 198 SAYFQEGMYRLSEAYSAIGDKDTA 221 >gi|89067817|ref|ZP_01155261.1| competence lipoprotein ComL, putative [Oceanicola granulosus HTCC2516] gi|89046415|gb|EAR52471.1| competence lipoprotein ComL, putative [Oceanicola granulosus HTCC2516] Length = 284 Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 110/204 (53%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E++E+ L A YF + R +P++ A+++L+M A + Y A + + Sbjct: 45 EIFERGEYELARGQADDAAFYFGEIERLYPYSEFAKRALIMQAAAYHQDRDYPNARAAAQ 104 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +I YP + Y YL+ +SY I ++ DQ T LQ + ++E Y +S Y + A Sbjct: 105 RFIDFYPADPDAAYAQYLLALSYYDQIDEIGRDQGLTFQALQALRTVIEVYPDSEYARAA 164 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LAAKE+E+GR+YLKR + AA+ RF++V+ ++ H EA+ RLVEAY+ Sbjct: 165 IPKFDLAFDHLAAKEMEVGRFYLKRDHFAAAVNRFRVVVEDFQTTAHTAEALHRLVEAYL 224 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 +L L DEA+ +++ Y W Sbjct: 225 SLGLTDEAQTAGAILGHNYRSTEW 248 >gi|57239503|ref|YP_180639.1| hypothetical protein Erum7760 [Ehrlichia ruminantium str. Welgevonden] gi|58579484|ref|YP_197696.1| hypothetical protein ERWE_CDS_08200 [Ehrlichia ruminantium str. Welgevonden] gi|57161582|emb|CAH58510.1| putative exported lipoprotein [Ehrlichia ruminantium str. Welgevonden] gi|58418110|emb|CAI27314.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Welgevonden] Length = 250 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/239 (30%), Positives = 125/239 (52%), Gaps = 8/239 (3%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 ++ F ++ FL S++ + SV + R +YE A+ + + A + + Sbjct: 14 ISCLFIVSCAFL-------SKERVVKSVEN-RTADGIYESALKKSSNKQYKDAVKDLEEI 65 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF+ VA K+ +M +F+ Y Y +AA+ E+YI YP+S+++D YYL M+ Sbjct: 66 DSLYPFSPVAIKARIMMSFLNYELENYSRAATYAEDYINLYPDSEDIDVAYYLRIMANYM 125 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 I D+ DQ + + + V + NS Y++ + + +AAKE IG++YL+R Sbjct: 126 QINDIDRDQSVAYKVSELLDEFVRLFPNSQYLEEVNLRLNMVHEHIAAKEFSIGKFYLQR 185 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 GEYVAAI RF +L Y + + E++ R EAY++L D ++ +SL+QE W Sbjct: 186 GEYVAAIRRFSTILKRYKNTRYFPESVYRTAEAYLSLGDKDAYKKYISLLQECCVGSEW 244 >gi|114327085|ref|YP_744242.1| ComL family lipoprotein [Granulibacter bethesdensis CGDNIH1] gi|114315259|gb|ABI61319.1| lipoprotein, ComL family [Granulibacter bethesdensis CGDNIH1] Length = 317 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 110/204 (53%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y V +++ ++ A + F+ + +P++ A + LM + QY KY A + Sbjct: 76 ELYNTGVDAMQDHRYTTAAQQFDAVQQYYPYSSWAANAQLMQGYSQYLEHKYMDAIGSLD 135 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +I +P K++ Y YYL +S+ + I D+ DQ+ T+ + + +V R+ +S Y + A Sbjct: 136 RFIQLHPTHKDIAYAYYLRALSFYEQIADIQRDQKGTEDAMTALQEVVSRFPDSGYARDA 195 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 R + + R+ LA KE+EIGRYY + Y AAI RFQ V+ Y H EA+ RL E Y+ Sbjct: 196 RLKIDLCRDHLAGKEMEIGRYYEREHLYAAAINRFQTVVKEYQTTNHVPEALHRLTELYL 255 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 L L +AR +++ YP W Sbjct: 256 LLGLRSDARRTAAVLGHNYPGSSW 279 >gi|58617537|ref|YP_196736.1| hypothetical protein ERGA_CDS_08100 [Ehrlichia ruminantium str. Gardel] gi|58417149|emb|CAI28262.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel] Length = 250 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/239 (30%), Positives = 125/239 (52%), Gaps = 8/239 (3%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 ++ F ++ FL S++ + SV + R +YE A+ + + A + + Sbjct: 14 ISCLFIVSCVFL-------SKERVVKSVEN-RTADGIYESALKKSSNKQYKDAVKDLEEI 65 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF+ VA K+ +M +F+ Y Y +AA+ E+YI YP+S+++D YYL M+ Sbjct: 66 DSLYPFSPVAIKARIMMSFLNYELENYSRAATYAEDYINLYPDSEDIDVAYYLRIMANYM 125 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 I D+ DQ + + + V + NS Y++ + + +AAKE IG++YL+R Sbjct: 126 QINDIDRDQSVAYKVSELLDEFVRLFPNSQYLEEVNLRLNMVHEHIAAKEFSIGKFYLQR 185 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 GEYVAAI RF +L Y + + E++ R EAY++L D ++ +SL+QE W Sbjct: 186 GEYVAAIRRFSTILKRYKNTRYFPESVYRTAEAYLSLGDKDAYKKYISLLQECCVGSEW 244 >gi|239948179|ref|ZP_04699932.1| DNA uptake lipoprotein [Rickettsia endosymbiont of Ixodes scapularis] gi|239922455|gb|EER22479.1| DNA uptake lipoprotein [Rickettsia endosymbiont of Ixodes scapularis] Length = 249 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/242 (30%), Positives = 129/242 (53%), Gaps = 7/242 (2%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 I + F +++S D+ + T +Y + V L+++ + KA E F + P Sbjct: 13 IGLVFSGCKSKKNSDDIVVPIPT-------LYNEGVTLLEKKKYKKAAEEFGRVFYQHPG 65 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL +SY +I DV Sbjct: 66 NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFINLHPANVDITYAYYLKALSYYMLISDVN 125 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 +DQ T L ++ ++ N+ Y + + + + LA KE+ +GR+YLK+ +AA Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAA 185 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 I RF+ V+ NY H+ EA+ RLVE+Y+ L L DEA++ S++ YP W Y L Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLVESYMMLGLPDEAKKYASVLGYNYPDSQWYSYAYRL 245 Query: 270 VK 271 VK Sbjct: 246 VK 247 >gi|254488543|ref|ZP_05101748.1| competence lipoprotein ComL [Roseobacter sp. GAI101] gi|214045412|gb|EEB86050.1| competence lipoprotein ComL [Roseobacter sp. GAI101] Length = 289 Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 117/204 (57%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +++E+ L + ++A EYF++ R +P++ A+++L+M AF + Y + S + Sbjct: 50 QIFERGEFELNRKRPAEAAEYFSEIERLYPYSEWAKRALIMQAFAFHQDQDYPNSRSAAQ 109 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +I +P+ + Y YL+ +SY I +V DQ T LQ + +++E Y +S Y + A Sbjct: 110 RFIDFFPDDDDAAYASYLLALSYYDQIDEVGRDQGLTFQALQSLRQVIENYPDSEYARAA 169 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + LA KE+E+GRYYL+R Y A+I RF++V+ ++ H EA+ RLVEAY+ Sbjct: 170 VLKFDLAFDHLAGKEMEVGRYYLRRKHYTASINRFRVVVEDFQTTSHTAEALHRLVEAYL 229 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 +L L +EA+ +++ Y W Sbjct: 230 SLGLTNEAQTAGAILGYNYQSTEW 253 >gi|85708862|ref|ZP_01039928.1| DNA uptake lipoprotein [Erythrobacter sp. NAP1] gi|85690396|gb|EAQ30399.1| DNA uptake lipoprotein [Erythrobacter sp. NAP1] Length = 266 Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 110/203 (54%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A L N + A F++ R P++ AR++ LMSAF Y A Y +A + Sbjct: 46 LYAEAQRRLDRGNTTLAAALFDEVERQHPYSPWARRAQLMSAFCYYIARDYNKAIQNSQR 105 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +++ +P +K+ Y YYL+ +SY + I DV DQ T+ + + R+ + Y AR Sbjct: 106 FLSIHPGNKDAPYAYYLIALSYYEQISDVNRDQSITEQAQIALREVNRRFPQTEYAADAR 165 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + + LA KE+EIGR+Y + G ++AA RF+ V+ Y H EA+ RL E+ +A Sbjct: 166 LKLDLVADHLAGKEMEIGRFYQRSGRWLAAQLRFRNVVETYETTSHTPEALYRLTESSLA 225 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 L + +EA + +++ YP W Sbjct: 226 LGIREEAVKYAAVLGANYPGTEW 248 >gi|330994414|ref|ZP_08318340.1| UPF0169 lipoprotein [Gluconacetobacter sp. SXCC-1] gi|330995012|ref|ZP_08318932.1| UPF0169 lipoprotein [Gluconacetobacter sp. SXCC-1] gi|329757925|gb|EGG74449.1| UPF0169 lipoprotein [Gluconacetobacter sp. SXCC-1] gi|329758540|gb|EGG75058.1| UPF0169 lipoprotein [Gluconacetobacter sp. SXCC-1] Length = 294 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 108/203 (53%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y V L+ + + F+ R++P++ + LM + Y KY +A + Sbjct: 55 LYNNGVDALRSDRYLLSVNQFDTLQRNYPYSQYTANAQLMEGYANYLLNKYPEAVQQLDR 114 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 ++ +P S + Y +YL + Y + + DV DQ+ T + + ++ R+ SPY + A+ Sbjct: 115 FLELHPTSADAAYAFYLRALCYYEQVADVQRDQQGTIEAMDALEEVITRFPQSPYARDAQ 174 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + R+ LA KE+ +GR+Y ++ +Y AA R+Q V+ ++ H EA+ RLVE Y+ Sbjct: 175 LKIDLCRDHLAGKEMLVGRWYQQQNDYPAAAGRYQRVVQDFQTTNHVPEALERLVEVYLD 234 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 + L+++AR+ +++ YP W Sbjct: 235 MGLLEQARKTGAVLAYNYPSSKW 257 >gi|294085893|ref|YP_003552653.1| competence lipoprotein ComL [Candidatus Puniceispirillum marinum IMCC1322] gi|292665468|gb|ADE40569.1| competence lipoprotein ComL, putative [Candidatus Puniceispirillum marinum IMCC1322] Length = 270 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 113/220 (51%), Gaps = 5/220 (2%) Query: 50 SVTDVRYQRE-----VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 S T+V Q E +Y +A+ N KA F + R P++ +A ++ LM+A+ Sbjct: 21 SSTEVEEQVERPVEQLYNEALNTALAGNAKKAAPKFEEVERQHPYSSLAVRAQLMAAWAF 80 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y Y +A + + ++ P + V+Y YYL + Y + I DV D TKL +Q Sbjct: 81 YQDNNYPRAIAALDRFVELNPADERVEYAYYLKALCYYEQIVDVQRDAEMTKLAMQAFEE 140 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V R+ + Y + A + + R+ LA KE+ +GR+YL + Y AA+ RF+ V+ +Y Sbjct: 141 LVRRFPDGDYFRDATLKIDLTRSHLAGKEMAVGRFYLSKQHYGAALRRFENVVTDYDTTN 200 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 EA+ R+ EAY++L L EA V + YP+ W + Sbjct: 201 QVPEALYRMTEAYLSLGLASEANRVEEVAVYNYPKSIWTQ 240 >gi|302383769|ref|YP_003819592.1| outer membrane assembly lipoprotein YfiO [Brevundimonas subvibrioides ATCC 15264] gi|302194397|gb|ADL01969.1| outer membrane assembly lipoprotein YfiO [Brevundimonas subvibrioides ATCC 15264] Length = 286 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 2/205 (0%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y L+ +S A +YF + R P++ +R+++LM + Y G Y+++ + + Sbjct: 49 LYNTGYTRLQSNRWSDAVDYFQEVERQHPYSEWSRRAILMQVYAHYQNGSYEESIAAADR 108 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I+ +P S + Y +Y+ + + I DV DQ + L + + RY S Y A Sbjct: 109 FISLFPGSPSAAYAFYMRATCHFEQIVDVGRDQNQAQQALDGLRDVARRYPGSSYATDAT 168 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAY 237 + + +QLA KE+ IGRYY + +AAI R++ V+ N Y H EA+ RLVE Y Sbjct: 169 VKIDMVNDQLAGKEMSIGRYYQRANLPLAAIGRYKAVIDNEAYQRTSHTPEALYRLVEVY 228 Query: 238 VALALMDEAREVVSLIQERYPQGYW 262 ++L L DEA S++ YP W Sbjct: 229 LSLGLKDEAERNGSVLGFNYPGSPW 253 >gi|58038651|ref|YP_190615.1| lipoprotein [Gluconobacter oxydans 621H] gi|58001065|gb|AAW59959.1| Hypothetical lipoprotein [Gluconobacter oxydans 621H] Length = 299 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 120/244 (49%), Gaps = 6/244 (2%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A++ F ++ C L + + ++ +Y + L ++ A F Sbjct: 24 AVSGFLLLSGCSLFSHQHEKP------AIPKTADAETLYNYGIDALHTGHYELAGGEFEL 77 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +++P++G + LM + Y G+Y + E Y+ +P S + Y +YL + Y Sbjct: 78 LQQNYPYSGFTGNAELMEGYAYYLQGEYALSVQQLERYLQLHPTSPDAAYAFYLRALCYY 137 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + I +V DQ+ T L + ++ R+ + Y + A+ + + R+ LA KE+ +GR+Y + Sbjct: 138 EQIANVERDQQGTVEALDALEEVITRFPQTSYARDAQLKIDLCRDHLAGKEMLVGRWYQQ 197 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + Y AA+ R+Q V+ +Y H EA+ RLVE Y+AL L D+A + +++ YP W Sbjct: 198 QRNYEAAMTRYQRVVQDYQTTNHVAEALERLVEVYLALGLKDQAHQTAAVLGYNYPDSQW 257 Query: 263 ARYV 266 RY Sbjct: 258 YRYA 261 >gi|157964248|ref|YP_001499072.1| DNA uptake lipoprotein [Rickettsia massiliae MTU5] gi|157844024|gb|ABV84525.1| DNA uptake lipoprotein [Rickettsia massiliae MTU5] Length = 251 Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 66/212 (31%), Positives = 117/212 (55%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + + L+++ + KA E F + P + ++ LM A+ + A +Y++A + + Sbjct: 36 LYNEGITLLEKKKYKKAAEEFGRVFYQHPGNEMTPQAELMQAYSLFLAAQYEEAVDVLDM 95 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I +P + ++ Y YYL +SY +I DV +DQ T L ++ ++ N+ Y + Sbjct: 96 FINLHPANVDIAYAYYLKALSYYMLISDVNHDQSRTFLAKDSFEDVIAKFPNTKYAIDSS 155 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + + LA KE+ +GR+YLK+ +AAI RF+ V+ NY H+ EA+ RL E+Y+ Sbjct: 156 LKIDLVNDHLAGKEMMVGRFYLKKKNPMAAINRFEEVIDNYQTTSHSVEALYRLAESYMM 215 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271 L L DEA++ S++ YP W Y LV+ Sbjct: 216 LGLPDEAKKYASVLGYNYPDSQWYSYAYRLVQ 247 >gi|254440813|ref|ZP_05054306.1| outer membrane assembly lipoprotein YfiO [Octadecabacter antarcticus 307] gi|198250891|gb|EDY75206.1| outer membrane assembly lipoprotein YfiO [Octadecabacter antarcticus 307] Length = 246 Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 111/209 (53%), Gaps = 3/209 (1%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 I++ L G SR D ++++E+ L+ A +F + R +P+ Sbjct: 2 ISLGLLAGCNSFDSRAA---GALDTFSAQQIFERGEFELESGQADDAAFFFGEIERLYPY 58 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + A+++L+M AF + Y + + + YI YP ++ Y YL+ +SY I ++ Sbjct: 59 SEWAKRALIMQAFSYHRDTDYPNSRAAAQRYIDFYPVDEDAAYAQYLLALSYYDQIDEIG 118 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 DQ T LQ + ++ERY +S Y + + + + LAAKE+EIGRYYLKR + A+ Sbjct: 119 RDQGLTFQALQALRVVIERYPDSEYAQSSVLKFDLAFDHLAAKEMEIGRYYLKRDHFAAS 178 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYV 238 I RF++V+ ++ H EA+ RLVE+Y+ Sbjct: 179 INRFRIVVEDFQTTSHTPEALHRLVESYL 207 >gi|296116445|ref|ZP_06835059.1| hypothetical protein GXY_11614 [Gluconacetobacter hansenii ATCC 23769] gi|295977038|gb|EFG83802.1| hypothetical protein GXY_11614 [Gluconacetobacter hansenii ATCC 23769] Length = 292 Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 108/203 (53%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y V L+ + A F+ R++P++ + LM + Y KY +A + Sbjct: 53 LYNHGVDALRTNRYVLATIQFDVLQRNYPYSQYTANAQLMEGYSDYLQSKYPEAVQQLDR 112 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 ++ +P S + Y +YL + Y + + DV DQ+ T + + ++ R+ +PY + A+ Sbjct: 113 FLELHPTSSDAAYAFYLRALCYYEQVADVQRDQQGTIESMDALEEVITRFPQTPYARDAQ 172 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + R+ LA KE+ +GR+Y ++ Y AA+ R+Q V+ ++ H EA+ RLVE Y+ Sbjct: 173 LKIDLCRDHLAGKEMLVGRFYQEQRNYQAAVNRYQRVVQDFQTTNHVPEALERLVEVYLD 232 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 L L+++AR+ +++ YP W Sbjct: 233 LGLLEQARKTGAVLAYNYPDSKW 255 >gi|269958518|ref|YP_003328305.1| putative DNA uptake lipoprotein ComL [Anaplasma centrale str. Israel] gi|269848347|gb|ACZ48991.1| putative DNA uptake lipoprotein ComL [Anaplasma centrale str. Israel] Length = 290 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 104/202 (51%), Gaps = 2/202 (0%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++YE + KA F++ +PF+ +A L++A Y G Y +AASL Sbjct: 34 HKLYEDGLRLFHSGQHKKAVAIFDKIEALYPFSQMAIDGSLVAAVSHYELGNYAEAASLA 93 Query: 118 EEYITQYPESKNVDYVYYL-VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 E YI YP SKN+DY YY+ V Y Q + D+ DQ + S V + NS Y+ Sbjct: 94 ESYIDAYPSSKNIDYAYYVRVTAKYMQ-VPDLGLDQGVALEVRNLASEFVRMFPNSRYLA 152 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 + + LAA+E IG +YL+RG ++AAI RF +++ Y D+ +A E + RLVEA Sbjct: 153 EVSQRLAAVQQHLAAREFMIGDFYLRRGGFIAAIKRFNSLVSGYPDSVYAHEGLYRLVEA 212 Query: 237 YVALALMDEAREVVSLIQERYP 258 Y AL A +S + E P Sbjct: 213 YTALGDRQSAAMYLSRLGENSP 234 >gi|84516947|ref|ZP_01004305.1| competence lipoprotein ComL, putative [Loktanella vestfoldensis SKA53] gi|84509415|gb|EAQ05874.1| competence lipoprotein ComL, putative [Loktanella vestfoldensis SKA53] Length = 261 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 112/205 (54%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++++E ++ N A F + R + ++ A+++L+M AF + G Y + + Sbjct: 21 QQIFELGERQIEAGNADDAAFTFGEIERLYHYSEFAQRALIMQAFAYHRDGDYPNSRAAA 80 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + ++ YP ++ Y YL+ +SY I D+ DQ T LQ + R++E Y +S Y Sbjct: 81 QRFVDFYPAEQDAPYAAYLLALSYYDQISDIGRDQGLTFEALQALRRVIETYPDSEYAAA 140 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 + + +QLAAKE+E+GRYYLKR Y AA RF+ V+ ++ H EA+ RLVEAY Sbjct: 141 SVAKFDLAFDQLAAKEMEVGRYYLKRANYAAAANRFRTVVEDFQTTTHTPEALHRLVEAY 200 Query: 238 VALALMDEAREVVSLIQERYPQGYW 262 ++L L DEA+ +++ Y W Sbjct: 201 LSLGLTDEAQTAGAILGYNYQSSDW 225 >gi|254451800|ref|ZP_05065237.1| DNA uptake lipoprotein [Octadecabacter antarcticus 238] gi|198266206|gb|EDY90476.1| DNA uptake lipoprotein [Octadecabacter antarcticus 238] Length = 207 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/163 (35%), Positives = 92/163 (56%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 +AF + Y + + + YI YP + Y YL+ +SY I ++ DQ T L Sbjct: 9 AAFSYHRDQDYPNSRAAAQHYIDFYPVDDDAAYAQYLLALSYYDQIDEIGRDQGLTFQAL 68 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 Q + ++ERY +S Y + + + + LAAKE+EIGRYYLKR + AA+ RF++V+ + Sbjct: 69 QALRVVIERYPDSEYARSSVLKFDLAFDHLAAKEMEIGRYYLKRDNFAAAVNRFRIVVED 128 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + H EA+ RLVE+Y++L L+DEAR +++ Y W Sbjct: 129 FQTTSHTPEALHRLVESYLSLGLLDEARSAGAVLGYNYRSTEW 171 >gi|148259767|ref|YP_001233894.1| DNA uptake lipoprotein-like protein [Acidiphilium cryptum JF-5] gi|326403265|ref|YP_004283346.1| putative lipoprotein [Acidiphilium multivorum AIU301] gi|146401448|gb|ABQ29975.1| DNA uptake lipoprotein-like protein [Acidiphilium cryptum JF-5] gi|325050126|dbj|BAJ80464.1| putative lipoprotein [Acidiphilium multivorum AIU301] Length = 315 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 61/205 (29%), Positives = 104/205 (50%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + +L + KA F + ++P++ A + L+ + +Y + A S Sbjct: 82 LYADGIAYLHKGENKKAARTFGEIEVNYPYSTWASHAELLQGYAEYREQNFDSAVSALNR 141 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I +P S Y YYL + + + I DV DQ T Q + ++ R+ +S Y + AR Sbjct: 142 FIELHPASPEAAYAYYLKALCFYEQIEDVQRDQTFTLEAAQALQDVISRFPDSAYARDAR 201 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + N+LA ++E+GR+Y ++ Y AAI R+Q+V+ Y EA+ RLVE Y+ Sbjct: 202 IKLRLVENRLAGHQMEVGRFYQRQNLYAAAISRYQVVVQQYQTTTFVPEALDRLVECYLD 261 Query: 240 LALMDEAREVVSLIQERYPQGYWAR 264 L L+ EAR +++ YP W R Sbjct: 262 LGLVKEARRNAAVLGYNYPGSRWYR 286 >gi|254995247|ref|ZP_05277437.1| hypothetical protein AmarM_04700 [Anaplasma marginale str. Mississippi] Length = 289 Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 103/198 (52%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++YE + E + KA F++ +PF+ +A L++A Y G Y ++ASL Sbjct: 53 HKLYEDGLRLFHEGRYKKAIAVFDKIEALYPFSQMAIDGSLVAAVAHYELGNYAESASLA 112 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E YI YP SK++DY YY+ ++ I D+ DQ + V + NS ++ Sbjct: 113 EGYIDSYPSSKSIDYAYYVRILAKYMQIPDLGLDQGVALEVRNLAYEFVRMFPNSRHLGE 172 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 + + LAA+E IG++YLKRG ++AA+ RF+ +++ Y + + E + RLVEAY Sbjct: 173 ISKRLAAVQQHLAAREFMIGKFYLKRGGHIAAVKRFRALISAYPSSAYTNEGLYRLVEAY 232 Query: 238 VALALMDEAREVVSLIQE 255 AL A +S + E Sbjct: 233 TALGDHKSAAAYLSKLDE 250 >gi|222475440|ref|YP_002563857.1| hypothetical protein AMF_769 [Anaplasma marginale str. Florida] gi|255003426|ref|ZP_05278390.1| hypothetical protein AmarPR_04180 [Anaplasma marginale str. Puerto Rico] gi|255004546|ref|ZP_05279347.1| hypothetical protein AmarV_04500 [Anaplasma marginale str. Virginia] gi|222419578|gb|ACM49601.1| Conserved hypothetical protein [Anaplasma marginale str. Florida] Length = 309 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 103/198 (52%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++YE + E + KA F++ +PF+ +A L++A Y G Y ++ASL Sbjct: 53 HKLYEDGLRLFHEGRYKKAIAVFDKIEALYPFSQMAIDGSLVAAVAHYELGNYAESASLA 112 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E YI YP SK++DY YY+ ++ I D+ DQ + V + NS ++ Sbjct: 113 EGYIDSYPSSKSIDYAYYVRILAKYMQIPDLGLDQGVALEVRNLAYEFVRMFPNSRHLGE 172 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 + + LAA+E IG++YLKRG ++AA+ RF+ +++ Y + + E + RLVEAY Sbjct: 173 ISKRLAAVQQHLAAREFMIGKFYLKRGGHIAAVKRFRALISAYPSSAYTNEGLYRLVEAY 232 Query: 238 VALALMDEAREVVSLIQE 255 AL A +S + E Sbjct: 233 TALGDHKSAAAYLSKLDE 250 >gi|56417074|ref|YP_154148.1| hypothetical protein AM1010 [Anaplasma marginale str. St. Maries] gi|56388306|gb|AAV86893.1| hypothetical protein AM1010 [Anaplasma marginale str. St. Maries] Length = 308 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 103/198 (52%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++YE + E + KA F++ +PF+ +A L++A Y G Y ++ASL Sbjct: 53 HKLYEDGLRLFHEGRYKKAIAVFDKIEALYPFSQMAIDGSLVAAVAHYELGNYAESASLA 112 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E YI YP SK++DY YY+ ++ I D+ DQ + V + NS ++ Sbjct: 113 EGYIDSYPSSKSIDYAYYVRILAKYMQIPDLGLDQGVALEVRNLAYEFVRMFPNSRHLGE 172 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 + + LAA+E IG++YLKRG ++AA+ RF+ +++ Y + + E + RLVEAY Sbjct: 173 ISKRLAAVQQHLAAREFMIGKFYLKRGGHIAAVKRFRALISAYPSSAYTNEGLYRLVEAY 232 Query: 238 VALALMDEAREVVSLIQE 255 AL A +S + E Sbjct: 233 TALGDHKSAAAYLSKLDE 250 >gi|126735392|ref|ZP_01751138.1| competence lipoprotein ComL, putative [Roseobacter sp. CCS2] gi|126715947|gb|EBA12812.1| competence lipoprotein ComL, putative [Roseobacter sp. CCS2] Length = 283 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 121/221 (54%), Gaps = 1/221 (0%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 S D + + D+ Q +++E+ ++ N A F + R +P++ A+++L+M A Sbjct: 28 SGNDRGGEPLDDLTAQ-QIFERGERQIERGNPDDAAFTFGEIERLYPYSEFAQRALIMQA 86 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F + Y + + + Y+ YP ++ Y YL+ +SY I +V DQ T LQ Sbjct: 87 FAYHRDEDYPNSRASAQRYLDFYPAEEDAAYAAYLLALSYYDQIDEVGRDQGLTFQALQS 146 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + ++E+Y +S Y + + + LAAKE+EIGR+YLKRG Y+AA RF+ V+ ++ Sbjct: 147 LRLVIEQYPDSEYASTSVLKFDLAFDHLAAKEMEIGRFYLKRGNYIAASNRFRTVVEDFQ 206 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 H EA+ RLVE+Y++L L++EA+ +++ Y W Sbjct: 207 TTSHTPEALHRLVESYLSLGLLEEAQTAGAILGYNYQSSEW 247 >gi|329890234|ref|ZP_08268577.1| competence lipoprotein comL [Brevundimonas diminuta ATCC 11568] gi|328845535|gb|EGF95099.1| competence lipoprotein comL [Brevundimonas diminuta ATCC 11568] Length = 287 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 104/205 (50%), Gaps = 2/205 (0%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y L+ + + A +YF + R P++ AR+++LM + Y YQ A + + Sbjct: 48 LYNTGYQRLQSKRWMDAVDYFQEVERQHPYSEWARRAILMQVYAYYQNNNYQDAIAAADR 107 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I +P + + Y +Y+ + + I DV DQ + L + +V RY S Y AR Sbjct: 108 FIALFPGNPSASYAFYMKAVCNFEQIVDVGRDQGYAEAALAGLRDVVRRYPGSSYATDAR 167 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAY 237 + + +QLA KE+ +GRYY + + + A+ R++ V+ N + H EA+ RLVE Sbjct: 168 VKIDMVNDQLAGKEMTVGRYYQRANQPLGALNRYKAVINNPDFQRTSHTPEALYRLVEVN 227 Query: 238 VALALMDEAREVVSLIQERYPQGYW 262 ++L L +EA +++ YP W Sbjct: 228 LSLGLTEEATRNAAVLGHNYPGSPW 252 >gi|254419865|ref|ZP_05033589.1| outer membrane assembly lipoprotein YfiO [Brevundimonas sp. BAL3] gi|196186042|gb|EDX81018.1| outer membrane assembly lipoprotein YfiO [Brevundimonas sp. BAL3] Length = 284 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 105/205 (51%), Gaps = 2/205 (0%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y L+++ ++ A +YF + R P++ AR+S+LM + Y Y A + + Sbjct: 47 LYNTGYQRLEQRRWADAVDYFQEVERQHPYSDWARRSILMQVYAFYQNNNYADAIAASDR 106 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I+ +P + + Y +Y+ + + I DV DQ L + + RY +PY A Sbjct: 107 FISLFPGNPSAAYAFYMKAVCNFEQITDVGRDQGYANAALAGLKDVARRYPGTPYASDAA 166 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAY 237 + + +QLA KE+ IGRYY + + +AA+ R++ V+AN + H EA+ RLVE Sbjct: 167 VKIDMVNDQLAGKEMNIGRYYQRANQPLAALNRYKAVIANPEFQRTSHTPEALYRLVEVN 226 Query: 238 VALALMDEAREVVSLIQERYPQGYW 262 + L L +EA +++ +P W Sbjct: 227 LQLGLKEEATRNGAVLGYNFPGSPW 251 >gi|58584928|ref|YP_198501.1| DNA uptake lipoprotein [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419244|gb|AAW71259.1| DNA uptake lipoprotein [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 237 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 73/242 (30%), Positives = 126/242 (52%), Gaps = 9/242 (3%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +YK +T F + F + +S DV+L+ + + E+YE+AV ++ + +A Sbjct: 1 MYKALITCFIFLVCSFTRSY---ASDDVHLE-----KSETELYEEAVELFDQKKYKQAIR 52 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F + +PF+ A K+ L+S Y+ Y AAS ++YI YP +++ YVYYL Sbjct: 53 AFRKIEDLYPFSYWAMKAKLLSGISHYNMDDYSSAASDMDDYIYIYPNGEDLPYVYYLRV 112 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY I V Q+ L+ + V ++ S Y++ + V + + + KE IG+ Sbjct: 113 LSYYMQINRVQLGQQTAYKALELAAEYVNLFSESEYIEEMKEKVRLITDHILKKEYSIGK 172 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 +Y +RGEY+AAI RFQ ++++ D + ++ L+ AY AL L EA + SL+ E Sbjct: 173 FYFRRGEYLAAIKRFQNIISS-KDYSYFPRSINYLIAAYSALGLDLEAGQYESLLAENLK 231 Query: 259 QG 260 + Sbjct: 232 EN 233 >gi|330813742|ref|YP_004357981.1| putative competence lipoprotein ComL [Candidatus Pelagibacter sp. IMCC9063] gi|327486837|gb|AEA81242.1| putative competence lipoprotein ComL [Candidatus Pelagibacter sp. IMCC9063] Length = 279 Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 118/221 (53%), Gaps = 2/221 (0%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV-ARKSLLMSA 101 ++ ++++ T + +R +Y +A+L K + A E F + +++ F A KSLLM Sbjct: 25 NKTIFVEPKTTIPLER-LYTEALLNYKNNKYQDAVELFEEVEKNYSFNTEWASKSLLMRG 83 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 ++ Y +Y ++ + +++ +Y +KN+DYV YL+ M + I + Q T L + Sbjct: 84 YIYYEVSRYVESLEILKKFKMRYAGNKNMDYVEYLIAMCLFEQINIIALSQENTLLTERQ 143 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 +I+ Y NS Y + ++F + + ++QLA KE+ I RYY +R ++ A+ R VL + Sbjct: 144 FKKIILNYPNSRYAEDSKFKLDLIQDQLAGKEMYIARYYTEREKWGPALVRLNKVLKYHE 203 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + EEA+ RLVE + L + AR+ S++ Y W Sbjct: 204 TTVYIEEALHRLVEIHYKLGNIPAARKYASILGYNYNDSDW 244 >gi|117923624|ref|YP_864241.1| DNA uptake lipoprotein-like protein [Magnetococcus sp. MC-1] gi|117607380|gb|ABK42835.1| DNA uptake lipoprotein-like protein [Magnetococcus sp. MC-1] Length = 302 Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 64/231 (27%), Positives = 113/231 (48%), Gaps = 7/231 (3%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 V L G +DV D +V +Y AV ++++N+ A F + PF+ Sbjct: 19 VLLLSGCSSTEEKDVQPDLAPEV-----MYRMAVNHVQKKNYKSAATIFTDLDQKHPFSP 73 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 A ++ L F Y ++ +A + +I +P V Y +Y++G+++ + I+D D Sbjct: 74 WAVRAQLNLIFATYKQDEFDEAVGHAKRFIRLHPRHPEVSYAFYMIGLAHYRQIKDPYRD 133 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q TK ++ R+ S Y A+ + RN++A +E+ +GRYY RGEY+AA+ Sbjct: 134 QARTKEAATAFHEVINRFGESDYAWEAQKMLDFCRNRMAQQEIVVGRYYFDRGEYIAAMK 193 Query: 212 RFQLVLAN--YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 RF ++ N + D+ EEA+ +V + + L L EA+ ++ Y G Sbjct: 194 RFNEIVDNPEFRDSLQTEEALFSMVLSALKLGLEQEAKNYAVVLGHNYKDG 244 >gi|67809654|gb|AAY81973.1| putative competence lipoprotein [Wolbachia pipientis] Length = 209 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 64/197 (32%), Positives = 110/197 (55%), Gaps = 1/197 (0%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 + E+YE+AV ++ ++KA F++ +PF+ A K+ L+S Y+ G Y AAS Sbjct: 9 ETELYEEAVELFDQKKYNKAIRAFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASD 68 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 ++YI Y +++ YVYYL +SY I V Q+ L+ + + + S YV Sbjct: 69 MDDYIYVYSNGEDLPYVYYLRVLSYYMQINKVQLGQQTAYKTLELATEYINLFPGSEYVD 128 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 + + ++ KE IG++YL+RGEY+AAI RFQ +A+Y D+++ +++ L+ A Sbjct: 129 EIKERAKLITEHISTKEYSIGKFYLRRGEYLAAIKRFQ-NMASYKDSKYFSKSINYLIAA 187 Query: 237 YVALALMDEAREVVSLI 253 + AL L EA + S++ Sbjct: 188 HSALGLDLEAEQYESML 204 >gi|319786172|ref|YP_004145647.1| outer membrane assembly lipoprotein YfiO [Pseudoxanthomonas suwonensis 11-1] gi|317464684|gb|ADV26416.1| outer membrane assembly lipoprotein YfiO [Pseudoxanthomonas suwonensis 11-1] Length = 297 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/246 (28%), Positives = 123/246 (50%), Gaps = 19/246 (7%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 RD + R E+YEK +++ N++ A F + +P+ ++L+ +A+ Sbjct: 34 GRDKKKKDADEGRPVAELYEKGHGYMERGNWTGAETVFRRLVAQYPYGPYTEQALMETAY 93 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL----- 157 QY AG++ +A S + +I YP +N+ Y YYL G+S + RD + QR L Sbjct: 94 AQYKAGRHDEAVSTIDRFIRTYPTHRNIAYFYYLRGLSNSN--RDAVFMQRVWSLDPSRR 151 Query: 158 -------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 + + + +RY NS Y AR + V RN A E++I YY++RG +++A+ Sbjct: 152 DLSSPQQAYEDFNTVAQRYPNSRYAPDARQRMVVLRNVFARHEMDIALYYMRRGAWLSAV 211 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQERYP--QGYWARY 265 R + +L Y +++ +A+A L E+Y L L ++A V+ L ++P G W +Y Sbjct: 212 SRAKYILETYPQSDYQYDAIAALAESYDNLGQKQLSEDAIRVLRLNDPQHPYLSGDWPKY 271 Query: 266 VETLVK 271 + K Sbjct: 272 PWAIRK 277 >gi|42520353|ref|NP_966268.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410091|gb|AAS14202.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of Drosophila melanogaster] Length = 235 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 73/235 (31%), Positives = 123/235 (52%), Gaps = 12/235 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +YK +T F FL+ QS Y D + + + E+YE+AV ++ + +A Sbjct: 1 MYKTLITCFI-----FLICSFTQS----YADDLE--KTETELYEEAVELFDQKKYKQAIR 49 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F++ +PF+ A K+ L+S Y+ G Y AAS +YI Y +++ YVYYL Sbjct: 50 AFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASDMADYIYVYSNGEDLPYVYYLRV 109 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY I V Q+ L+ + + + S YV + + ++ KE IG+ Sbjct: 110 LSYYMQINKVQLGQQTAYKTLELATEYINLFPGSEYVDEIKERAKLITEHISTKEYSIGK 169 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +YL+RGEY+AAI RFQ +A+Y D+++ +++ L+ A+ AL L EA + S++ Sbjct: 170 FYLRRGEYLAAIKRFQ-NMASYKDSKYFSKSINHLIAAHSALGLDLEAEQYESML 223 >gi|225630083|ref|YP_002726874.1| competence lipoprotein ComL, putative [Wolbachia sp. wRi] gi|225592064|gb|ACN95083.1| competence lipoprotein ComL, putative [Wolbachia sp. wRi] Length = 217 Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 73/229 (31%), Positives = 120/229 (52%), Gaps = 12/229 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +YK +T F FL+ QS Y D + + + E+YE+AV ++ + +A Sbjct: 1 MYKTLITCFI-----FLICSFTQS----YADDLE--KTETELYEEAVELFDQKKYKQAIR 49 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F++ +PF+ A K+ L+S Y+ G Y AAS ++YI Y +++ YVYYL Sbjct: 50 AFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASDMDDYIYVYSNGEDLPYVYYLRV 109 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY I V Q+ L+ + + + S YV + + ++ KE IG+ Sbjct: 110 LSYYMQINKVQLGQQTAYKTLELATEYINLFPGSEYVDEIKERAKLITEHISTKEYSIGK 169 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 +YL+RGEY+AAI RFQ +A+Y D+++ +++ LV A+ AL L EA Sbjct: 170 FYLRRGEYLAAIKRFQ-NMASYKDSKYFSKSINYLVAAHSALGLDLEAE 217 >gi|194366932|ref|YP_002029542.1| outer membrane assembly lipoprotein YfiO [Stenotrophomonas maltophilia R551-3] gi|194349736|gb|ACF52859.1| outer membrane assembly lipoprotein YfiO [Stenotrophomonas maltophilia R551-3] Length = 289 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 20/258 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LT + V G R + + D T V ++YEK+ ++ N+S A F + Sbjct: 8 LTALLLVLVIAATGCHRGAKKGDRPDEGTPVE---QLYEKSHKLMQGGNWSGAESSFRRL 64 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P+ ++++ +A+ QY AGK+ A S + +I YP +N+ Y+YYL G++ + Sbjct: 65 VAQYPYGPYTEQAMIETAYAQYKAGKHDDAVSSIDRFIRTYPTHRNIAYLYYLRGLANSN 124 Query: 144 ----MIRDVPYDQRATKLMLQYMSR-------IVERYTNSPYVKGARFYVTVGRNQLAAK 192 +R V + A++ L + +V+RY NS Y AR + R+ A Sbjct: 125 RSTVFLRHV-WSLDASRRDLSTPHQAYSDFNIVVDRYPNSRYAADARQRMLELRDVFAQH 183 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREV 249 E++ YY++RG +V+A R +L Y + +A+A L ++Y L L D+AR V Sbjct: 184 ELDNALYYMRRGAWVSAAGRANYLLETYPQSAFQYDAVAVLADSYTHLGNKTLADDARRV 243 Query: 250 VSLIQERYP--QGYWARY 265 + L Q +P +G W +Y Sbjct: 244 LQLNQPDHPWLEGKWPKY 261 >gi|91762852|ref|ZP_01264817.1| putative competence lipoprotein ComL [Candidatus Pelagibacter ubique HTCC1002] gi|91718654|gb|EAS85304.1| putative competence lipoprotein ComL [Candidatus Pelagibacter ubique HTCC1002] Length = 282 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 99/183 (54%) Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 FN+ FP + A KS +M+A+ Y+ Y A E Y+ YP K+ Y ++L+GM Sbjct: 62 FNEAELLFPQSPWAAKSAIMAAYAYYTQDYYGDAIFELERYLVTYPNHKDKVYAHFLLGM 121 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S+ + I D D ++ + ++ Y ++ + A+F + + LAAKE+ I RY Sbjct: 122 SFYEQIVDEKKDLKSILDSKEQFETLIRDYPSTEFAMDAKFKIDLINEILAAKEMYIARY 181 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YLK+ +++ A+ RF+ V+ +Y+ + EEA+ RLVE L L++E+++ S + Y Sbjct: 182 YLKKTKWIPALNRFKTVVKDYNTTIYTEEALHRLVEINYRLGLINESKKYASTLGYNYQS 241 Query: 260 GYW 262 W Sbjct: 242 SDW 244 >gi|254525277|ref|ZP_05137332.1| competence lipoprotein [Stenotrophomonas sp. SKA14] gi|219722868|gb|EED41393.1| competence lipoprotein [Stenotrophomonas sp. SKA14] Length = 289 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 20/258 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LT + V G R + + D T V ++YEK+ ++ N+S A F + Sbjct: 8 LTALLLVLVIAATGCHRGAKKGDRPDEGTPVE---QLYEKSHKLMQGGNWSGAETSFRRL 64 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P+ ++++ +A+ QY AGK+ A S + +I YP +N+ Y+YYL G++ + Sbjct: 65 VAQYPYGPYTEQAMIETAYAQYKAGKHDDAVSSIDRFIRTYPTHRNIAYLYYLRGLANSN 124 Query: 144 ----MIRDVPYDQRATKLMLQYMSR-------IVERYTNSPYVKGARFYVTVGRNQLAAK 192 +R V + A++ L + +V+RY NS Y AR + R+ A Sbjct: 125 RSTVFLRRV-WSLDASRRDLSTPHQAYSDFNIVVDRYPNSRYAADARSRMLELRDVFAQH 183 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREV 249 E++ YY++RG +V+A R +L Y + +A+A L ++Y L L D+AR V Sbjct: 184 ELDNALYYMRRGAWVSAAGRANYLLETYPQSAFQYDAVAVLADSYTHLGNKTLADDARRV 243 Query: 250 VSLIQERYP--QGYWARY 265 + L Q +P +G W +Y Sbjct: 244 LQLNQPDHPWLEGKWPKY 261 >gi|190575602|ref|YP_001973447.1| putative competence lipoprotein [Stenotrophomonas maltophilia K279a] gi|190013524|emb|CAQ47159.1| putative competence lipoprotein precursor [Stenotrophomonas maltophilia K279a] Length = 295 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 20/258 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LT + V G R + + D T V ++YEK+ ++ N+S A F + Sbjct: 14 LTALLLVLVIAATGCHRGAKKGDRPDEGTPVE---QLYEKSHKLMQGGNWSGAETSFRRL 70 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P+ ++++ +A+ QY AGK+ A S + +I YP +N+ Y+YYL G++ + Sbjct: 71 VAQYPYGPYTEQAMIETAYAQYKAGKHDDAVSSIDRFIRTYPTHRNIAYLYYLRGLANSN 130 Query: 144 ----MIRDVPYDQRATKLMLQYMSR-------IVERYTNSPYVKGARFYVTVGRNQLAAK 192 +R V + A++ L + +V+RY NS Y AR + R+ A Sbjct: 131 RSTVFLRRV-WSLDASRRDLSTPHQAYSDFNIVVDRYPNSRYAADARQRMLELRDVFAQH 189 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREV 249 E++ YY++RG +V+A R +L Y + +A+A L ++Y L L D+AR V Sbjct: 190 ELDNALYYMRRGAWVSAAGRANYLLETYPQSAFQYDAVAVLADSYTHLGNKTLADDARRV 249 Query: 250 VSLIQERYP--QGYWARY 265 + L Q +P +G W +Y Sbjct: 250 LQLNQPDHPWLEGKWPKY 267 >gi|253996249|ref|YP_003048313.1| outer membrane assembly lipoprotein YfiO [Methylotenera mobilis JLW8] gi|253982928|gb|ACT47786.1| outer membrane assembly lipoprotein YfiO [Methylotenera mobilis JLW8] Length = 267 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 13/212 (6%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y++ ++++++ KA YF + +P A ++ L +A+ Y A + + Sbjct: 36 IYQEGAAKMQDRDYDKAIVYFQKLESRYPHGKYATQAQLETAYAHYKKQDPVSAVAAADR 95 Query: 120 YITQYPESKNVDYVYYLVGMS-----------YAQMIRDVPYDQRATKLMLQYMSRIVER 168 +I +P+ NVDY YYL G++ Q + D D RA K +V R Sbjct: 96 FIKLHPDHPNVDYAYYLKGLAVFNERGIIEKLTKQQVSDR--DPRALKDSFATFKELVTR 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y S YVK A + N L+ E+ + RYY+KR YVAAI R + V+ Y + H EE Sbjct: 154 YPKSRYVKDATQRMVYLANSLSEHELHVARYYMKRKAYVAAINRTKYVIEYYPQSPHVEE 213 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 A+ ++ AY + + D + + +++ YP Sbjct: 214 ALVIMISAYDLMGMDDLKNDTLRVLKTNYPDS 245 >gi|190571590|ref|YP_001975948.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018995|ref|ZP_03334802.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357862|emb|CAQ55321.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995104|gb|EEB55745.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 228 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 111/199 (55%), Gaps = 1/199 (0%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 + E+YE+AV ++ + +A F + +P + A K+ L+S Y+ G Y AAS Sbjct: 28 ETELYEEAVKLYDQKKYKQAIRAFQKIEDLYPLSYWAMKAKLLSGVSYYNMGNYSSAASD 87 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 ++YI YP +++ YVYYL +SY I V Q+ L+ + + + NS Y++ Sbjct: 88 MDDYIYVYPNGEDLPYVYYLRVLSYYMQINKVQLGQQIAYKTLELATEYINLFPNSEYIE 147 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 + + ++ KE IG +YLKRGEY+AAI RFQ +++N D++++ ++ L+ A Sbjct: 148 EIKEKEKLITEHISKKEYSIGEFYLKRGEYLAAIKRFQDMISN-KDSKYSSRVISYLITA 206 Query: 237 YVALALMDEAREVVSLIQE 255 ++AL L EA + +++ E Sbjct: 207 HLALGLDLEAEQYENMLVE 225 >gi|297172748|gb|ADI23714.1| DNA uptake lipoprotein [uncultured Oceanospirillales bacterium HF4000_21D01] Length = 327 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 68/240 (28%), Positives = 115/240 (47%), Gaps = 16/240 (6%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 I+ C GW D D + + + + Y +A+ L Q+F+ A + FPF Sbjct: 18 ISAC---GW---FGDDEDADEFSGLSTEEQFYRRALDQLNGQSFNAAISTYQALESRFPF 71 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-----AQM 144 A ++ + + Y + A + + +I +PE++NVDY YY+ G+S + Sbjct: 72 GRFAAQAQIEIVYAYYRNNDVEAARAAADRFIRLHPENENVDYAYYMKGLSSFSDNRGLL 131 Query: 145 IRDVPYDQRA-----TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 R +P D ++ S+++ Y +SPY AR + RN LAA E+ + Y Sbjct: 132 NRFLPIDPTKRDPGRSRESFSDFSQLLALYPDSPYAADARARMIFLRNNLAAYEIHVANY 191 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YL+R Y+AA+ R Q V+ N+ +A ++E Y+ L L D A ++L++E YPQ Sbjct: 192 YLERSAYIAALRRGQYVVENFQGTPAVAYGVAIMIEGYLRLGLDDLADTSLALLRENYPQ 251 >gi|225677404|ref|ZP_03788371.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590548|gb|EEH11808.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 235 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 72/235 (30%), Positives = 121/235 (51%), Gaps = 12/235 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +YK +T F FL+ QS Y D + + + E+YE+AV ++ + +A Sbjct: 1 MYKTLITCFI-----FLICSFTQS----YADDLE--KTETELYEEAVELFDQKKYKQAVR 49 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F++ +PF+ A K+ L+S Y+ G Y AAS +YI Y +++ YVYYL Sbjct: 50 AFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASDMADYIYVYSNGEDLPYVYYLRV 109 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY I V Q+ L+ + + + S YV + + ++ KE IG+ Sbjct: 110 LSYYMQINKVQLGQQTAYKTLELATEYINLFPGSEYVGEIKEKAKLITEHISTKEYSIGK 169 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +YLKRGEY+AAI RFQ + +Y D+++ +++ L+ A+ AL L E + S++ Sbjct: 170 FYLKRGEYLAAIKRFQNI-ESYKDSKYFSKSINYLIAAHSALGLDLEVEQYESML 223 >gi|239787476|emb|CAX83947.1| DNA uptake lipoprotein-like protein precursor [uncultured bacterium] Length = 289 Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 114/214 (53%), Gaps = 2/214 (0%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + V +++ F A + F + R PF+ A ++ L + Y +Y++A S E Sbjct: 36 LYRQGVQAIQKNRFPVAVKRFQEVDRKHPFSPWAVRAQLNLIYAHYMDEEYEEALSAAER 95 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 ++ +P +V Y YY++ +++ + I D DQ TK ++ R+ +S Y + AR Sbjct: 96 FVRLHPRHPHVAYPYYMLALAHYKRIADPLRDQGHTKQAEVAFRELIARFPDSDYAEEAR 155 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAY 237 + + R++LAA+EV +GR+YL R +Y+AA RF+ V+ N ++ + EEA+ LV + Sbjct: 156 RMLELCRDRLAAQEVVVGRFYLDRDQYIAATNRFRRVVENQDFNRTPYVEEALFGLVMSS 215 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + L L EA +++ Y G + + +V+ Sbjct: 216 LKLGLPQEALTYAAVLGHNYADGPFYPHARAMVE 249 >gi|18203349|sp|Q9PEU0|Y938_XYLFA RecName: Full=UPF0169 lipoprotein XF_0938; Flags: Precursor Length = 292 Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 24/256 (9%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 + G R++ ++ D V + +Y+KA +K+ N++ A F + +P+ Sbjct: 22 VLITGCHREAKKNA--DDGMPVEH---LYDKAHTLMKKGNWAGAEVSFKRLIAQYPYGPY 76 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-- 150 ++++ +A+ QY +GK+ A S + +I YP N+ Y+YYL G+S + RD + Sbjct: 77 TEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYLYYLRGLSNSN--RDTIFLR 134 Query: 151 ----------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 D A + +++RY NS Y A+ +T RN A E+ + YY Sbjct: 135 KVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYAADAKKQMTELRNMFAQYEMNVTLYY 194 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQERY 257 L+R +VAA R +L Y + +A+A L EAY L L D AR+V+ + Sbjct: 195 LRRTAWVAAAGRANFLLETYPQSAFQYDAVAALGEAYTHLGNKTLADNARQVLQTNAPDH 254 Query: 258 P--QGYWARYVETLVK 271 P +G W +Y + K Sbjct: 255 PWLKGKWPKYPAAIRK 270 >gi|15837540|ref|NP_298228.1| hypothetical protein XF0938 [Xylella fastidiosa 9a5c] gi|9105861|gb|AAF83748.1|AE003932_12 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 297 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 24/256 (9%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 + G R++ ++ D V + +Y+KA +K+ N++ A F + +P+ Sbjct: 27 VLITGCHREAKKNA--DDGMPVEH---LYDKAHTLMKKGNWAGAEVSFKRLIAQYPYGPY 81 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-- 150 ++++ +A+ QY +GK+ A S + +I YP N+ Y+YYL G+S + RD + Sbjct: 82 TEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYLYYLRGLSNSN--RDTIFLR 139 Query: 151 ----------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 D A + +++RY NS Y A+ +T RN A E+ + YY Sbjct: 140 KVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYAADAKKQMTELRNMFAQYEMNVTLYY 199 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQERY 257 L+R +VAA R +L Y + +A+A L EAY L L D AR+V+ + Sbjct: 200 LRRTAWVAAAGRANFLLETYPQSAFQYDAVAALGEAYTHLGNKTLADNARQVLQTNAPDH 259 Query: 258 P--QGYWARYVETLVK 271 P +G W +Y + K Sbjct: 260 PWLKGKWPKYPAAIRK 275 >gi|254482813|ref|ZP_05096050.1| outer membrane assembly lipoprotein YfiO [marine gamma proteobacterium HTCC2148] gi|214036894|gb|EEB77564.1| outer membrane assembly lipoprotein YfiO [marine gamma proteobacterium HTCC2148] Length = 289 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 67/249 (26%), Positives = 116/249 (46%), Gaps = 17/249 (6%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K+AL S+ ++G S D D D Q ++YE+A +L+ +N++ A Sbjct: 2 KYALVFLLSL---IIIGC---SGNDELPDIAADTGEQ-QIYEEAQRYLRNKNWNLAVRSL 54 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 +PF A +S L + Y+ ++ A E +I +P NVDY YY+ G++ Sbjct: 55 QVLESRYPFGKYAEQSQLEIIYAHYNGYEHDAAVEAAERFIRLHPAHPNVDYAYYMKGLA 114 Query: 141 YAQMIRDV-----PYDQRA-----TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 D+ P D+ K +++V R+ +SPY AR + RN LA Sbjct: 115 AFAGNDDIFSRFLPTDESERDVSQAKEAFAEFNQLVSRFPDSPYAPDARARMVHLRNLLA 174 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 E+ + YY +RG Y+AA R + V+ N+ + +A + + Y+ L L D A++ + Sbjct: 175 RHEILVANYYFRRGAYMAATNRGRYVVENFQRTPAVADGLAVMAQGYILLGLEDLAKDTI 234 Query: 251 SLIQERYPQ 259 ++ YP+ Sbjct: 235 GILAMNYPE 243 >gi|285017489|ref|YP_003375200.1| lipoprotein precursor [Xanthomonas albilineans GPE PC73] gi|283472707|emb|CBA15212.1| putative lipoprotein precursor [Xanthomonas albilineans] Length = 291 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 19/224 (8%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y+K ++ N+S A F + +P+ ++++ SA+ QY AGK+ A S + Sbjct: 43 QLYQKGHAQMESGNWSGADHSFKRLIAQYPYGQYTEQAMIESAYAQYKAGKHDDAVSTID 102 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY------------MSRIV 166 +I YP +N+ Y+YYL G+S + RD + +R L + + Sbjct: 103 RFIRTYPTQRNIAYMYYLRGLSNSN--RDTVFLRRLWSLDPSRRDLSTPQQAYADFNTVT 160 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 +RY NS Y AR + RN A E++ YYL+RG +V+A R +L Y + Sbjct: 161 DRYPNSRYAADARERMIALRNVFAQHELDNALYYLRRGAWVSATSRANYLLETYPQSAFQ 220 Query: 227 EEAMARLVEAYVAL---ALMDEAREVVSLIQERYP--QGYWARY 265 +A+A L +AY L AL +AR V+ L ++P G W +Y Sbjct: 221 YDAVAVLADAYTHLGNKALAADARRVLELNDPKHPWLSGQWPKY 264 >gi|71898900|ref|ZP_00681067.1| putative lipoprotein [Xylella fastidiosa Ann-1] gi|71731312|gb|EAO33376.1| putative lipoprotein [Xylella fastidiosa Ann-1] Length = 292 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 71/255 (27%), Positives = 121/255 (47%), Gaps = 24/255 (9%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + G R++ ++ D V + +Y+KA +K+ N++ A F + +P+ Sbjct: 23 LITGCHRETKKNA--DDGMPVEH---LYDKAHTLMKKGNWAGAEVSFKRLIAQYPYGPYT 77 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY--- 150 ++++ +A+ QY +GK+ A S + +I YP N+ Y+YYL G+S + RD + Sbjct: 78 EQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN--RDTIFLRK 135 Query: 151 ---------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 D A + +++RY NS Y A+ +T RN A E+ + YYL Sbjct: 136 VWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYAADAKKQMTELRNMFAQYEMNVILYYL 195 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQERYP 258 +R +VAA R +L Y + +A+A L EAY L L D AR+V+ +P Sbjct: 196 RRTAWVAAAGRANFLLETYPQSAFQYDAVAALGEAYTHLGNKTLADNARQVLQTNAPDHP 255 Query: 259 --QGYWARYVETLVK 271 +G W +Y + K Sbjct: 256 WLKGKWPKYPAAIRK 270 >gi|91775966|ref|YP_545722.1| putative competence lipoprotein precursor [Methylobacillus flagellatus KT] gi|91709953|gb|ABE49881.1| putative competence lipoprotein precursor [Methylobacillus flagellatus KT] Length = 267 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/252 (27%), Positives = 111/252 (44%), Gaps = 20/252 (7%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + AL + C + G + LD QR +Y AV + +++ KA +Y Sbjct: 3 HSLALIAVLWLTGCAIFGAPTE------LDETKGWPVQR-IYAAAVENMTTRDYEKAIKY 55 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F +P A +S L + Y + + +I +P NVDY YY+ G+ Sbjct: 56 FQILESRYPHGRYATQSQLEVIYAHYKKNDPAATMAAADRFIKLHPNHPNVDYAYYMKGL 115 Query: 140 SY-----------AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + Q I D D ++ + + +V R+ NS YVK A ++ N Sbjct: 116 ATFNERGIIEKLTKQQISD--RDPKSLRESFLALKELVNRFPNSRYVKDATLRMSYLVNS 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + RYY+KR YVAA R + V+ Y D H EEA+ L+ AY A+++ D + Sbjct: 174 LAQHELHVARYYMKRQAYVAAANRCKYVMEFYPDTPHIEEALVILISAYDAMSMDDLRDD 233 Query: 249 VVSLIQERYPQG 260 ++ + YP Sbjct: 234 AKRVLAQNYPNS 245 >gi|114775489|ref|ZP_01451057.1| probable transmembrane protein [Mariprofundus ferrooxydans PV-1] gi|114553600|gb|EAU55981.1| probable transmembrane protein [Mariprofundus ferrooxydans PV-1] Length = 228 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 98/211 (46%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 YEK+ + N+++A S +P++ A ++ L+ F Y ++ + L + Sbjct: 18 AYEKSKHQVTIGNYAEATMALEHFSSKYPYSKFAIQAELLRIFAAYKDDEFVLSEVLSQR 77 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I +P N DY Y++ MS + D K ++ +++ + +S Y K + Sbjct: 78 FIDLHPGHANADYAMYMLAMSQYKQRASAEKDPTQNKAAIKSFKKLIREHPDSSYAKQGK 137 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 Y+ N LA E+ IG++Y R YVAA RFQ V+ +Y EEA+ L +Y Sbjct: 138 MYLQSLYNSLAKHELTIGKFYFDRDRYVAAANRFQQVIQHYQTTPSIEEALYYLASSYAK 197 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLV 270 + + +A + L+Q YP W+ E + Sbjct: 198 MDMKTDASQTAQLLQHNYPHSSWSSKAERFL 228 >gi|94501302|ref|ZP_01307823.1| competence lipoprotein ComL, putative [Oceanobacter sp. RED65] gi|94426573|gb|EAT11560.1| competence lipoprotein ComL, putative [Oceanobacter sp. RED65] Length = 291 Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 10/213 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +R +Y+KA+ + +NF A E + +PF + ++ L QY A + A + Sbjct: 47 ERGIYDKAMEAIGNENFFLAIETLERLENRYPFGKYSEQAQLEMIHAQYQAQDLENARAT 106 Query: 117 GEEYITQYPESKNVDYVYYL-------VGMSYAQ---MIRDVPYDQRATKLMLQYMSRIV 166 E +I +P+ VDY YY+ +G+S + + D + ++ ++ Sbjct: 107 AERFIRLHPQHPKVDYAYYMKALTTYELGLSLVERYFADEESQRDPSPAQESFNELAELI 166 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 +R+ NS Y AR + R+++A E+ + RYYLKR YVAA R + V+ N+ + Sbjct: 167 KRFPNSEYAADARQRMIYLRDRIALHEIHVARYYLKRHAYVAAANRGRNVVENFQGTKQV 226 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 ++ +A +VEAY L D A + + +++ YP+ Sbjct: 227 DDGLAMMVEAYTLLGQKDLADKSLKVLKANYPE 259 >gi|253999418|ref|YP_003051481.1| outer membrane assembly lipoprotein YfiO [Methylovorus sp. SIP3-4] gi|253986097|gb|ACT50954.1| outer membrane assembly lipoprotein YfiO [Methylovorus sp. SIP3-4] Length = 268 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 14/224 (6%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 LD QR +Y +A ++ +++ KA +YF +P A ++ + + Y Sbjct: 25 LDETKGWSAQR-IYTEADEKMRSRDYEKAIKYFETLESRYPHGRFATQAQMDKIYAYYKR 83 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-----------AQMIRDVPYDQRATK 156 + + +I +P+ N+DY YY+ G++ Q I D D ++ + Sbjct: 84 NDPISTIAAADRFIKLHPDHPNIDYAYYMKGLATFNERGVIEKLTKQQISD--RDPKSLR 141 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + +V RY NS YVK A +T + LA E+ + RYY+KR Y+A++ R + V Sbjct: 142 ESFLALKELVTRYPNSRYVKDATLRMTYLVDMLANSELHVARYYMKRQAYLASVNRCKFV 201 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L Y D+ EEA+ ++ AY + + D ++ + ++Q YP Sbjct: 202 LETYPDSPSVEEALVIMISAYDLMGMTDLKQDTLRVLQTNYPDS 245 >gi|262276887|ref|ZP_06054680.1| outer membrane assembly lipoprotein YfiO [alpha proteobacterium HIMB114] gi|262223990|gb|EEY74449.1| outer membrane assembly lipoprotein YfiO [alpha proteobacterium HIMB114] Length = 277 Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 107/200 (53%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N++++ E F + + ++ A ++ LM ++ Y + Q E++ Y + + Sbjct: 51 NWTESVELFQKVETRYSYSEWAPRATLMILYIHYDSNDSIQTLRYVEKFKKLYSGREEIS 110 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 YV ++ M++ + I V DQ T++ L+ I+++Y NS Y K ++ + + QLA Sbjct: 111 YVDFIRAMTFYEQINVVSKDQTYTEVALKEFREIIKKYPNSIYAKESKLKIDLILEQLAG 170 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 KE+ + RYY+ + ++++A+ R +VL+ Y ++ EA+ RLVE Y L ++EA++ + Sbjct: 171 KEMYLARYYMNKNKWISALKRLNIVLSKYETTIYSTEALHRLVEIYYRLGNVNEAKKYAA 230 Query: 252 LIQERYPQGYWARYVETLVK 271 L+ + W + +VK Sbjct: 231 LLGYNFNDSDWYKKTYRIVK 250 >gi|182682371|ref|YP_001830531.1| competence lipoprotein [Xylella fastidiosa M23] gi|32130367|sp|Q87AR6|Y1756_XYLFT RecName: Full=UPF0169 lipoprotein PD_1756; Flags: Precursor gi|182632481|gb|ACB93257.1| competence lipoprotein [Xylella fastidiosa M23] Length = 293 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 25/256 (9%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + G R++ ++ D V + +Y+KA +K+ N++ A F + +P+ Sbjct: 23 LITGCHRETKKNA--DDGMPVEH---LYDKAHTLMKKGNWAGAELSFKRLIAQYPYGPYT 77 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY--- 150 ++++ +A+ QY +GK+ A S + +I YP N+ Y+YYL G+S + RD + Sbjct: 78 EQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN--RDTIFLRK 135 Query: 151 ---------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 D A + +++RY NS Y A+ +T RN A E+ + YYL Sbjct: 136 VWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYATDAKKQMTELRNMFAQYEMNVTLYYL 195 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQERYP 258 +R +VAA R +L Y + +A+A L EAY L L D AR+V+ +P Sbjct: 196 RRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLADNARQVLQTNAPDHP 255 Query: 259 --QG-YWARYVETLVK 271 +G W +Y + K Sbjct: 256 WLKGKKWPKYPAAIRK 271 >gi|28199627|ref|NP_779941.1| hypothetical protein PD1756 [Xylella fastidiosa Temecula1] gi|28057742|gb|AAO29590.1| conserved hypothetical protein [Xylella fastidiosa Temecula1] Length = 298 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 25/256 (9%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + G R++ ++ D V + +Y+KA +K+ N++ A F + +P+ Sbjct: 28 LITGCHRETKKNA--DDGMPVEH---LYDKAHTLMKKGNWAGAELSFKRLIAQYPYGPYT 82 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY--- 150 ++++ +A+ QY +GK+ A S + +I YP N+ Y+YYL G+S + RD + Sbjct: 83 EQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN--RDTIFLRK 140 Query: 151 ---------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 D A + +++RY NS Y A+ +T RN A E+ + YYL Sbjct: 141 VWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYATDAKKQMTELRNMFAQYEMNVTLYYL 200 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQERYP 258 +R +VAA R +L Y + +A+A L EAY L L D AR+V+ +P Sbjct: 201 RRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLADNARQVLQTNAPDHP 260 Query: 259 --QG-YWARYVETLVK 271 +G W +Y + K Sbjct: 261 WLKGKKWPKYPAAIRK 276 >gi|307578654|gb|ADN62623.1| competence lipoprotein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 293 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 25/256 (9%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + G R++ ++ D V + +Y+KA +K+ N++ A F + +P+ Sbjct: 23 LITGCHRETKKNA--DDGMPVEH---LYDKAHXLMKKGNWAGAELSFKRLIAQYPYGPYT 77 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY--- 150 ++++ +A+ QY +GK+ A S + +I YP N+ Y+YYL G+S + RD + Sbjct: 78 EQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN--RDTIFLRK 135 Query: 151 ---------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 D A + +++RY NS Y A+ +T RN A E+ + YYL Sbjct: 136 VWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYATDAKKQMTELRNMFAQYEMNVTLYYL 195 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQERYP 258 +R +VAA R +L Y + +A+A L EAY L L D AR+V+ +P Sbjct: 196 RRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLADNARQVLQTNAPDHP 255 Query: 259 --QG-YWARYVETLVK 271 +G W +Y + K Sbjct: 256 WLKGKKWPKYPAAIRK 271 >gi|313201440|ref|YP_004040098.1| outer membrane assembly lipoprotein yfio [Methylovorus sp. MP688] gi|312440756|gb|ADQ84862.1| outer membrane assembly lipoprotein YfiO [Methylovorus sp. MP688] Length = 268 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 14/224 (6%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 LD QR +Y +A ++ +++ KA +YF +P A ++ + + Y Sbjct: 25 LDETKGWSAQR-IYTEADEKMRSRDYEKAIKYFETLESRYPHGRFATQAQMDKIYAYYKR 83 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-----------AQMIRDVPYDQRATK 156 + + +I +P+ N+DY YY+ G++ Q I D D ++ + Sbjct: 84 NDPISTIAAADRFIKLHPDHPNIDYAYYMKGLATFNERGVIEKLTKQQISD--RDPKSLR 141 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + +V RY NS YVK A +T + LA E+ + RYY+KR Y+A++ R + V Sbjct: 142 ESFLALKELVTRYPNSRYVKDATLRMTYLVDMLANSELHVARYYMKRQAYLASVNRCKFV 201 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L Y D+ EEA+ ++ AY + + D ++ + ++Q YP Sbjct: 202 LETYPDSPSVEEALVIMISAYDLMGMDDLKQDTLRVLQTNYPDS 245 >gi|192359694|ref|YP_001983660.1| competence protein ComL [Cellvibrio japonicus Ueda107] gi|190685859|gb|ACE83537.1| competence protein ComL [Cellvibrio japonicus Ueda107] Length = 327 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 10/216 (4%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 V + ++Y+ A L + A + +FPF A ++ L + Y +G+ A Sbjct: 53 VTTEADLYQAAERQLNNSQWQTAIKNLQTLEENFPFGTYAEQAQLELIYAYYMSGEPDAA 112 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSY-----AQMIRDVPYD-----QRATKLMLQYMS 163 + +I +P+ +NVDY YY++GMS R +P D A + L + Sbjct: 113 IATANRFIRLHPQHRNVDYAYYMLGMSSFTKDKGMFERVLPVDITRRDPGAARESLANFT 172 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 +++ RY +S Y A+ + RN LA E+ + YY KRG Y+AA+ R + VL N+ Sbjct: 173 QLLNRYPDSAYAADAKKRMLFLRNLLARYEIHVANYYFKRGAYIAAVGRGRYVLENFPKT 232 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +A+A +V+ Y +++ +A E++ +++ YP Sbjct: 233 PAIPDALAVMVQGYRLMSMSTQADEMLEILRTNYPN 268 >gi|71276442|ref|ZP_00652718.1| putative lipoprotein [Xylella fastidiosa Dixon] gi|71901553|ref|ZP_00683636.1| putative lipoprotein [Xylella fastidiosa Ann-1] gi|170730992|ref|YP_001776425.1| putative lipoprotein [Xylella fastidiosa M12] gi|71162758|gb|EAO12484.1| putative lipoprotein [Xylella fastidiosa Dixon] gi|71728677|gb|EAO30825.1| putative lipoprotein [Xylella fastidiosa Ann-1] gi|167965785|gb|ACA12795.1| putative lipoprotein [Xylella fastidiosa M12] Length = 293 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 25/256 (9%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + G R++ ++ D V + +Y+KA +K+ N++ A F + +P+ Sbjct: 23 LITGCHRETKKNA--DDGMPVEH---LYDKAHTLMKKGNWAGAEVSFKRLIAQYPYGPYT 77 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY--- 150 ++++ +A+ QY +GK+ A S + +I YP N+ Y+YYL G+S + RD + Sbjct: 78 EQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN--RDTIFLRK 135 Query: 151 ---------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 D A + +++RY NS Y A+ +T RN A E+ + YYL Sbjct: 136 VWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYAADAKKQMTELRNMFAQYEMNVTLYYL 195 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQERYP 258 +R +VAA R +L Y + +A+A L EAY L L D AR+V+ +P Sbjct: 196 RRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLADNARQVLQTNAPDHP 255 Query: 259 --QG-YWARYVETLVK 271 +G W +Y + K Sbjct: 256 WLKGKKWPKYPAAIRK 271 >gi|241763388|ref|ZP_04761443.1| outer membrane assembly lipoprotein YfiO [Acidovorax delafieldii 2AN] gi|241367430|gb|EER61741.1| outer membrane assembly lipoprotein YfiO [Acidovorax delafieldii 2AN] Length = 265 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 10/215 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A L F KA + +A+++ L A+ QY G+ QA + + Sbjct: 37 IYSEAKDELGSGAFDKAVPLLEKLEGRAAGTPLAQQAQLDKAYAQYKGGEKAQAIATLDR 96 Query: 120 YITQYPESKNVDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 +I +P S +DY YL G+ S+ DQ+A K + +S +V R+ Sbjct: 97 FIKLHPASPALDYALYLKGLVNFNDNLGLFSWVSQQDLSERDQKAAKDSFESLSELVTRF 156 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 +S Y K AR +T N LA EV + RYY +RG YVAAI R Q LA+Y EEA Sbjct: 157 PDSRYAKDARQRMTYIVNSLAQYEVHVARYYYERGAYVAAIGRAQSALADYQGVPALEEA 216 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 + L+++Y AL + + +++ YPQG A+ Sbjct: 217 LYILMQSYDALGMTQLRDDTRRVMEASYPQGALAK 251 >gi|254517172|ref|ZP_05129230.1| competence protein ComL [gamma proteobacterium NOR5-3] gi|219674677|gb|EED31045.1| competence protein ComL [gamma proteobacterium NOR5-3] Length = 280 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 10/213 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++++Y++A +L +NF A +PF A ++ L + Y A + A Sbjct: 21 EQQIYDEAQRYLNARNFDLAIRALQALESRYPFGRYAEQAQLELIYAHYGAYSPEAAIEA 80 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRD-----VPYDQ--RAT---KLMLQYMSRIV 166 + +I +P+ NVDY YY+ G++ A +D P D+ R T K S++V Sbjct: 81 ADRFIRLHPQHPNVDYAYYMKGLATATASQDFLSRFTPTDKTLRDTSFAKEAFAEFSQLV 140 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 R+ NSPY A+ + RN LA E+ + YY +RG Y+AA R + V+ N+ Sbjct: 141 TRFPNSPYASDAKSRMVYLRNLLARNEIHVANYYFRRGAYLAAANRGRYVVENFQGTPAV 200 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + +A + + Y+ L + D A+ + + YP+ Sbjct: 201 GDGLAVMAQGYLILGMNDLAQNAIDTLALNYPE 233 >gi|83648562|ref|YP_436997.1| DNA uptake lipoprotein [Hahella chejuensis KCTC 2396] gi|83636605|gb|ABC32572.1| DNA uptake lipoprotein [Hahella chejuensis KCTC 2396] Length = 275 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 10/213 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++E Y+KA L NF +A + PF A ++ L + Y++ ++A S Sbjct: 29 EKEYYDKAKSALDSGNFLEAARHLEDLETYHPFGRYAEQAQLDLIYAHYNSLNPERAESA 88 Query: 117 GEEYITQYPESKNVDYVYYLVGMS--YAQM---IRDVPYDQRA-----TKLMLQYMSRIV 166 E +I +PES +VDY YY+ G++ YA + R +P D + K + S +V Sbjct: 89 AERFIRLHPESPHVDYAYYIKGLAAYYADLGLGPRFLPIDVNSRDPGRAKEAFRDFSTLV 148 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + +SPY A + + +LA E+ + RYY++R YVAA+ R Q V+ NY D Sbjct: 149 TNFPDSPYAADAEKRMLAIKERLAQYEMHVARYYIRRQAYVAAVARAQYVVENYPDTPVV 208 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 EA++ +VE Y L + A + + L+ YP Sbjct: 209 PEALSLMVELYRYLGMQRHADDALVLLAASYPD 241 >gi|254281628|ref|ZP_04956596.1| competence protein ComL [gamma proteobacterium NOR51-B] gi|219677831|gb|EED34180.1| competence protein ComL [gamma proteobacterium NOR51-B] Length = 307 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 10/213 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++++Y +A +L+ +F A +PF A ++ L F Y +++ A Sbjct: 48 EQQIYLEAQRYLENDSFDLAIRTLQMLESRYPFGRYAEQAQLELVFAHYGGREFEAAIEA 107 Query: 117 GEEYITQYPESKNVDYVYYLVGMS--------YAQMI--RDVPYDQRATKLMLQYMSRIV 166 +I +P+ NVDY YY+ G++ A ++ D D K L ++++ Sbjct: 108 ANRFIRLHPQHPNVDYAYYMKGLAAYDIDGGFLASLVPTDDTKRDVGHMKEALAEFAQLL 167 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 R+ +SPY AR + RN LA E+ + YY +RG Y+AA+ R + V+ N Sbjct: 168 ARFPDSPYAPDARLRMVHLRNMLARHEIHVANYYFRRGAYMAALNRGRYVVENLEQTPSV 227 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + +A + +AY+ L L D A + + +++ YP Sbjct: 228 ADGLAIMAQAYLLLGLDDLAIDTIEVLKANYPN 260 >gi|71082726|ref|YP_265445.1| putative competence lipoprotein ComL [Candidatus Pelagibacter ubique HTCC1062] gi|71061839|gb|AAZ20842.1| putative competence lipoprotein ComL [Candidatus Pelagibacter ubique HTCC1062] Length = 282 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 99/183 (54%) Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 FN+ FP + A KS +M+A+ Y+ Y A E Y+ YP K+ Y ++L+GM Sbjct: 62 FNEAELLFPQSPWAAKSAIMAAYAYYTQYYYSDAIFELERYLVTYPNHKDKVYAHFLLGM 121 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S+ + I D D ++ + I+ Y ++ + A+F + + LAAKE+ I RY Sbjct: 122 SFYEQIVDEKKDLKSILDSKEQFETIIRDYPSTEFAMDAKFKIDLINEILAAKEMYIARY 181 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YLK+ +++ A+ RF+ V+ +Y+ + EEA+ RLVE L L++E+++ S + Y Sbjct: 182 YLKKTKWIPALNRFKTVVKDYNTTIYTEEALHRLVEINYRLGLINESKKYASTLGYNYQS 241 Query: 260 GYW 262 W Sbjct: 242 SDW 244 >gi|148285105|ref|YP_001249195.1| TPR repeat-containing protein [Orientia tsutsugamushi str. Boryong] gi|146740544|emb|CAM81139.1| tetratricopeptide repeat protein with 1 trp repeats [Orientia tsutsugamushi str. Boryong] Length = 264 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 59/256 (23%), Positives = 129/256 (50%), Gaps = 12/256 (4%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 +++F T+F + + + ++ + YL + + Y +A L +++ ++ A Sbjct: 13 NMFRFICTLFVLLCFTNCIIFAKEKTIITYLS-------EDDAYSRAELLFQKKKYNAAA 65 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + F + A K+ LM + Y AG+Y +A+ + + +I +P + + VYYL Sbjct: 66 KQFFDIFVQHLGSNTATKAELMQGYSLYLAGQYSEASEVLDNFIRLHPVHQKIADVYYLK 125 Query: 138 GMS-YAQMIRDVPYDQR-ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 ++ Y Q +Q KL LQ ++++++ S + A+ + V LA+ +++ Sbjct: 126 ALAEYKQAHNQQDLEQLLHAKLALQ---QVIDKFPKSDFAVKAKEKINVISKNLASSQID 182 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 IG++YL + +AA+ RF V+ YS + EA+ R+ ++Y L E +E ++++ Sbjct: 183 IGKFYLNKKNPIAALNRFNTVVDKYSHTSYYPEAIYRIAQSYALLGRKQEMKEQLAILNI 242 Query: 256 RYPQGYWARYVETLVK 271 ++P G W++ +L++ Sbjct: 243 KFPNGTWSKRASSLLQ 258 >gi|58581219|ref|YP_200235.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623137|ref|YP_450509.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58425813|gb|AAW74850.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367077|dbj|BAE68235.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 293 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 22/260 (8%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A I + + F+V + ++D D V ++Y KA +++ N++ A F Sbjct: 11 ARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVE---QLYGKAHNLMEKGNWAGAEASFKH 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +P+ ++++ SA+ QY AGK+ S + +I YP +N+ Y+YYL G+ A Sbjct: 68 LIAQYPYGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNIAYLYYLRGL--A 125 Query: 143 QMIRDVPY------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 RD + D + + + + +RY NS Y AR + R+ A Sbjct: 126 NSNRDTVFLRHVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFA 185 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAR 247 E++ YYL+R +V+A R +L Y + + +A+A L EAY L L +AR Sbjct: 186 QHELDNALYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADAR 245 Query: 248 EVVSLIQERYP--QGYWARY 265 V+ L ++P G W +Y Sbjct: 246 RVLELNDPKHPWLTGNWPKY 265 >gi|330962680|gb|EGH62940.1| competence lipoprotein ComL [Pseudomonas syringae pv. maculicola str. ES4326] Length = 340 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 14/228 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 19 SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153 + Y G+ + A S E +I +P+ NVDY YY+ G+ S+ Q + R +P DQ Sbjct: 75 YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134 Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 A + +++ RY NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 135 PGAARDSFNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|15603585|ref|NP_246659.1| hypothetical protein PM1720 [Pasteurella multocida subsp. multocida str. Pm70] gi|18202811|sp|Q9CKA5|Y1720_PASMU RecName: Full=UPF0169 lipoprotein PM1720; Flags: Precursor gi|12722132|gb|AAK03804.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 260 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 23/245 (9%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + F F+I C S+DV + R ++E+Y L+ ++S+A Y Sbjct: 7 FTFIALTAFAITAC-------SGSKDV------EQRPEQELYNVGQTHLQNGDYSQAIRY 53 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 + FP + + ++LL + Y Y Q L + + QYP S+N+DYV Y+ G+ Sbjct: 54 LDAVRSRFPGSSYSEQTLLNLIYANYKTQDYTQTLVLADRFFQQYPTSRNLDYVLYMAGL 113 Query: 140 SYAQM----IRDVPYDQRAT------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + A + I+D+ RAT K +V+ + NSPY + A + + L Sbjct: 114 TNAALGDNYIQDLFRIDRATRESSSIKAAFANFQTLVQNFPNSPYAQDALARMAYIKASL 173 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A E+ I ++Y KR +VA R +L Y D + EA+ + EAY + L D A + Sbjct: 174 ARHELAIAKFYAKRDAHVAVANRVVGMLQQYPDTQATYEALPLMQEAYEKMNLNDLAAKT 233 Query: 250 VSLIQ 254 ++I+ Sbjct: 234 AAIIE 238 >gi|166713129|ref|ZP_02244336.1| competence lipoprotein [Xanthomonas oryzae pv. oryzicola BLS256] Length = 293 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 22/260 (8%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A I + + F+V + ++D D V ++Y KA +++ N++ A F + Sbjct: 11 ARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVE---QLYGKAHNLMEKGNWAGAEASFKR 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +P+ ++++ SA+ QY AGK+ S + +I YP +N+ Y+YYL G+ A Sbjct: 68 LIAQYPYGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNIAYLYYLRGL--A 125 Query: 143 QMIRDVPY------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 RD + D + + + + +RY NS Y AR + R+ A Sbjct: 126 NSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFA 185 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAR 247 E++ YYL+R +V+A R +L Y + + +A+A L EAY L L +AR Sbjct: 186 QHELDDALYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADAR 245 Query: 248 EVVSLIQERYP--QGYWARY 265 V+ L ++P G W +Y Sbjct: 246 RVLELNDPKHPWLTGNWPKY 265 >gi|330878988|gb|EGH13137.1| competence lipoprotein ComL [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 340 Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 14/228 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 19 SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153 + Y G+ + A S E +I +P+ NVDY YY+ G+ S+ Q + R +P DQ Sbjct: 75 YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134 Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 A + +++ RY NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 135 PGAARDSFNEFAQLTSRYPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|254490941|ref|ZP_05104123.1| outer membrane assembly lipoprotein YfiO [Methylophaga thiooxidans DMS010] gi|224463850|gb|EEF80117.1| outer membrane assembly lipoprotein YfiO [Methylophaga thiooxydans DMS010] Length = 261 Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 14/211 (6%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 VY +A L ++ A Y+ Q FPF A+++LL SA+ Y + A + + Sbjct: 39 VYSEANAALTLGDYETAITYYEQLEARFPFGEYAQQALLESAYAHYKNDDPETAIATLDR 98 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPY------------DQRATKLMLQYMSRIVE 167 ++ YP + N+DY YL G++ RD+ + D A + L+ +V Sbjct: 99 FMRVYPLNPNIDYAIYLRGLT--SFHRDIGFFEKYIPRDESQRDPGAAEDALRDFKTLVT 156 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 R+ S Y + + + RN+LA EV + YY++RG Y+AA R + VL NY Sbjct: 157 RFPQSRYAEDSTQRIVYLRNRLAQHEVNVANYYMRRGSYIAAANRGKYVLENYPRTPSMP 216 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYP 258 EA+ + +AY L + D +++ + +++ YP Sbjct: 217 EALVVMAKAYKVLDMHDLSQDALRVLELNYP 247 >gi|213971043|ref|ZP_03399163.1| competence lipoprotein ComL [Pseudomonas syringae pv. tomato T1] gi|301384234|ref|ZP_07232652.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. tomato Max13] gi|302059467|ref|ZP_07251008.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. tomato K40] gi|302134991|ref|ZP_07260981.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924151|gb|EEB57726.1| competence lipoprotein ComL [Pseudomonas syringae pv. tomato T1] gi|331018388|gb|EGH98444.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 340 Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 14/228 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 19 SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153 + Y G+ + A S E +I +P+ NVDY YY+ G+ S+ Q + R +P DQ Sbjct: 75 YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134 Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 A + +++ RY NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 135 PGAARDSFNEFAQLTSRYPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|330966363|gb|EGH66623.1| competence lipoprotein ComL [Pseudomonas syringae pv. actinidiae str. M302091] Length = 340 Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 14/228 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 19 SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153 + Y G+ + A S E +I +P+ NVDY YY+ G+ S+ Q + R +P DQ Sbjct: 75 YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134 Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 A + +++ RY NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 135 PGAARDSFNEFAQLTSRYPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|119505581|ref|ZP_01627652.1| competence protein ComL [marine gamma proteobacterium HTCC2080] gi|119458524|gb|EAW39628.1| competence protein ComL [marine gamma proteobacterium HTCC2080] Length = 336 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 10/213 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++++Y +A L NF+ A +PF A ++ L + Y A +++ A Sbjct: 78 EQQIYLEAQRSLDSGNFNTAIRTLQLLESRYPFGRYAEQAQLELVYAHYGAYEFEAAIEA 137 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIV 166 + +I +P+ NVDY YY+ G+S M D D K ++++ Sbjct: 138 ADRFIRLHPQHPNVDYAYYMKGLSAFDMEGGFLASFVPTDDTKRDVSHIKEAFAEFAQLL 197 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 R+ +S Y AR + RN LA EV + YY +RG Y+AA+ R + V+ + Sbjct: 198 ARFPDSAYAPDARARMVHMRNMLARHEVHVANYYFRRGAYMAALNRGRYVVEHMQQTPSV 257 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + +A + +AY+ L D A++ ++++ E +P Sbjct: 258 ADGLAIMAQAYILLDFNDLAKDSIAVLHENFPD 290 >gi|28868054|ref|NP_790673.1| competence lipoprotein ComL [Pseudomonas syringae pv. tomato str. DC3000] gi|28851290|gb|AAO54368.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 338 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 14/228 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 17 SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 72 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153 + Y G+ + A S E +I +P+ NVDY YY+ G+ S+ Q + R +P DQ Sbjct: 73 YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 132 Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 A + +++ RY NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 133 PGAARDSFNEFAQLTSRYPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 192 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 193 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 240 >gi|330977499|gb|EGH77445.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 256 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 14/228 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 19 SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153 + Y G+ + A S E +I +P+ NVDY YY+ G+ S+ Q + R +P DQ Sbjct: 75 YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134 Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|257481619|ref|ZP_05635660.1| competence lipoprotein ComL [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 266 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 14/228 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 19 SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153 + Y G+ + A S E +I +P+ NVDY YY+ G+ S+ Q + R +P DQ Sbjct: 75 YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134 Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|188575740|ref|YP_001912669.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520192|gb|ACD58137.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 277 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 22/253 (8%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 + + F+V + ++D D V ++Y KA +++ N++ A F +P+ Sbjct: 2 LVMAFVVTGCHRGAKDKNPDEGMPVE---QLYGKAHNLMEKGNWAGAEASFKHLIAQYPY 58 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 ++++ SA+ QY AGK+ S + +I YP +N+ Y+YYL G+ A RD Sbjct: 59 GPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNIAYLYYLRGL--ANSNRDTV 116 Query: 150 Y------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + D + + + + +RY NS Y AR + R+ A E++ Sbjct: 117 FLRHVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFAQHELDNA 176 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQ 254 YYL+R +V+A R +L Y + + +A+A L EAY L L +AR V+ L Sbjct: 177 LYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADARRVLELND 236 Query: 255 ERYP--QGYWARY 265 ++P G W +Y Sbjct: 237 PKHPWLTGNWPKY 249 >gi|297183891|gb|ADI20013.1| DNA uptake lipoprotein [uncultured gamma proteobacterium EB000_65A11] Length = 285 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 19/243 (7%) Query: 30 IAVCFLVGWERQSSRDVYLD-SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 +++ FL G + + D T++ Y Y+ + L+ N+ A E FP Sbjct: 16 LSLIFLAGCSSDKAEEGEEDIDATELEY----YKMSQSALRSGNYQTAVERLQFLEARFP 71 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 F A ++ L + Y + + + A + + +I +P+ NVDY YYL GM A D Sbjct: 72 FGRYAEQAQLEIIYAYYKSAQSESARAAADRFIRLHPQHPNVDYAYYLRGM--ASFDEDT 129 Query: 149 PY------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 + D A + S++++R+ NS Y A++ + RN LA E+ + Sbjct: 130 NFLEKFIPMNAATRDPGAARDSFNDFSQLIKRFPNSQYAPDAQYRMIYLRNLLAEYEINV 189 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 RYY+ RG Y+AA R + V N+ + + +A +VEAY L + A E + ++ E Sbjct: 190 ARYYIYRGAYIAAANRGRHVFENFQETPSVPDGLAIMVEAYTLLNMETLASEALMVLSEN 249 Query: 257 YPQ 259 +P Sbjct: 250 FPD 252 >gi|90417172|ref|ZP_01225099.1| competence lipoprotein ComL, putative [marine gamma proteobacterium HTCC2207] gi|90330948|gb|EAS46209.1| competence lipoprotein ComL, putative [marine gamma proteobacterium HTCC2207] Length = 330 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 14/237 (5%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 C +GW + S + T+V + YEK L N+S A FPF Sbjct: 19 CSWLGWGEEESTEDETSGYTEVDF----YEKIQSSLNASNWSVAISNLELLESQFPFGKY 74 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD----- 147 A ++ L + Q+ G + + + + +I +P+ NVDY +Y+ G+S Sbjct: 75 AEQAQLELMYAQFKTGDHDSSIAAADRFIRLHPQHPNVDYAFYVKGLSEVSQATSAFDNF 134 Query: 148 VPYDQR-----ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 +P D + S ++ R+ SPY AR + RNQL E+ + YY Sbjct: 135 LPTDNSRRDIGTARDAFGTFSELLNRFPKSPYAPDARKRLVNLRNQLGRAEIHVANYYFS 194 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 RG Y+AA R + V+ N+ + +A + + Y L + + + V ++ YP+ Sbjct: 195 RGAYLAAANRGRFVVENFQQTPAVPDGLAVMAQGYQMLGMQELSDHAVEVLAANYPE 251 >gi|332283690|ref|YP_004415601.1| competence lipoprotein precursor [Pusillimonas sp. T7-7] gi|330427643|gb|AEC18977.1| competence lipoprotein precursor [Pusillimonas sp. T7-7] Length = 258 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 11/228 (4%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 S V D T +R +Y+ A + N++ A +PF G A+++L+ A Sbjct: 10 GSTKVEKDPTTGWSAER-LYQDARAEISAGNWNDARTRLEAIEARYPFGGYAQQALIDQA 68 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM--------SYAQMIRDVPYDQR 153 +V + G+ +QA + + + QYP DY+ YL G+ S+ + R P ++ Sbjct: 69 YVNWKDGEPEQALAAIDRFQQQYPNHPGTDYMLYLKGLVTFTPPSASFTNITRQDPSERD 128 Query: 154 ATKLMLQYMS--RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 L Y S ++ RY +S Y A+ VT N +A EV + YY +RG YVAAI Sbjct: 129 PKGLRESYDSFNELIARYPDSRYTADAKKRVTWLVNTIAQNEVHVATYYYERGAYVAAIN 188 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R Q V+ ++ +E+A+ +V AY L L + + ++ E +P Sbjct: 189 RAQTVVTDFQGVPASEKALYIMVLAYDKLQLPELRDDAKRVLDENFPN 236 >gi|66043990|ref|YP_233831.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. syringae B728a] gi|63254697|gb|AAY35793.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. syringae B728a] gi|330954254|gb|EGH54514.1| competence lipoprotein ComL, putative [Pseudomonas syringae Cit 7] Length = 340 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 14/228 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 19 SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153 + Y G+ + A S E +I +P+ NVDY YY+ G+ S+ Q + R +P DQ Sbjct: 75 YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134 Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|289674869|ref|ZP_06495759.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. syringae FF5] gi|330941211|gb|EGH44079.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. pisi str. 1704B] Length = 340 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 14/228 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 19 SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153 + Y G+ + A S E +I +P+ NVDY YY+ G+ S+ Q + R +P DQ Sbjct: 75 YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134 Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|237801869|ref|ZP_04590330.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024727|gb|EGI04783.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. oryzae str. 1_6] Length = 340 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 14/228 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 19 SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153 + Y G+ + A S E +I +P+ NVDY YY+ G+ S+ Q + R +P DQ Sbjct: 75 YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134 Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|302185254|ref|ZP_07261927.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. syringae 642] Length = 340 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 14/228 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 19 SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153 + Y G+ + A S E +I +P+ NVDY YY+ G+ S+ Q + R +P DQ Sbjct: 75 YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134 Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|71736201|ref|YP_273031.1| competence lipoprotein ComL [Pseudomonas syringae pv. phaseolicola 1448A] gi|289626966|ref|ZP_06459920.1| competence lipoprotein ComL [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651378|ref|ZP_06482721.1| competence lipoprotein ComL [Pseudomonas syringae pv. aesculi str. 2250] gi|71556754|gb|AAZ35965.1| competence lipoprotein ComL [Pseudomonas syringae pv. phaseolicola 1448A] gi|330869190|gb|EGH03899.1| competence lipoprotein ComL [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330891574|gb|EGH24235.1| competence lipoprotein ComL [Pseudomonas syringae pv. mori str. 301020] gi|330988805|gb|EGH86908.1| competence lipoprotein ComL [Pseudomonas syringae pv. lachrymans str. M301315] Length = 340 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 14/228 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 19 SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153 + Y G+ + A S E +I +P+ NVDY YY+ G+ S+ Q + R +P DQ Sbjct: 75 YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134 Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|330721663|gb|EGG99674.1| putative component of the lipoprotein assembly complex (forms a complex with YaeT2C YfgL2C and NlpB) [gamma proteobacterium IMCC2047] Length = 286 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/250 (26%), Positives = 114/250 (45%), Gaps = 20/250 (8%) Query: 23 ALTIFFSIAVCF---LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 +L I S+ VC L G R+ +S T +E A+ K N+S A E Sbjct: 5 SLKILASL-VCLALLLTGCSSNDKREFTENSET------AFFENAMKASKAGNYSTAIEL 57 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 + +PF ++++ L F Y + Y+ + + +I +P+ +DYVYYL G+ Sbjct: 58 LEELESRYPFGRYSQQAQLELIFAYYKSADYESSRATSSRFIRLHPQHLKLDYVYYLKGL 117 Query: 140 SYAQMIRD-------VPYDQR---ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + Q +D + QR A + L ++ R+ +S Y AR + RNQL Sbjct: 118 ASYQQDKDFFDRFLNIETSQRDMGAARQSLVDFGILLNRFPDSQYADEARARMIYLRNQL 177 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A E+ +G+YY+KR ++AA R + V+ NY + +A +++ Y L L D + Sbjct: 178 AEHEIHVGQYYIKRKAWIAAANRGRYVVENYPTTPSVPDGLALMIQGYQQLGLTDLVNQT 237 Query: 250 VSLIQERYPQ 259 ++ + P Sbjct: 238 QKILSQNAPN 247 >gi|297538119|ref|YP_003673888.1| outer membrane assembly lipoprotein YfiO [Methylotenera sp. 301] gi|297257466|gb|ADI29311.1| outer membrane assembly lipoprotein YfiO [Methylotenera sp. 301] Length = 269 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 22/252 (8%) Query: 21 KFALTIFFSIAV--CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 K+ L + F++ + C + G + LD + +R +Y+ ++++++ KA Sbjct: 2 KYILILMFALLMNGCAIFGAPTE------LDDTKGLTAER-IYQMGSEKMRDKDYDKAIV 54 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 YF + +P A ++ L +A+ + + + +I +P NVDY YYL G Sbjct: 55 YFGKLESRYPNGRFAAQAQLETAYAHFKKQDPVLCVAAADRFIKLHPNHPNVDYAYYLKG 114 Query: 139 MS-----------YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 ++ Q I D D R+ + +V RY NS Y K A + N Sbjct: 115 LAVFNERGVIEKLTKQQISD--RDPRSLRDSFVTFKDLVTRYPNSKYAKDATQRMVYLAN 172 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 L+ E+++ YY+KR Y+AAI R + VL Y E+A+ ++ AY + L D + Sbjct: 173 SLSDHELDVANYYMKRQAYLAAINRCKYVLEYYPQTPGVEQALVTMISAYDLMGLDDLKK 232 Query: 248 EVVSLIQERYPQ 259 + V +++ YP Sbjct: 233 DTVRILETNYPN 244 >gi|298485412|ref|ZP_07003501.1| Competence lipoprotein ComL [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160062|gb|EFI01094.1| Competence lipoprotein ComL [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 340 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 14/228 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 19 SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153 + Y G+ + A S E +I +P+ NVDY YY+ G+ S+ Q + R +P DQ Sbjct: 75 YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134 Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|119897308|ref|YP_932521.1| competence lipoprotein [Azoarcus sp. BH72] gi|119669721|emb|CAL93634.1| probable competence lipoprotein precursor [Azoarcus sp. BH72] Length = 269 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 19/249 (7%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 KFAL + C SS +D + Q+ +Y +A + E + +A + F Sbjct: 12 KFALIGALLLGAC--------SSLPDEIDETSGWNAQK-LYAEAKASMTEGGYDRAIKLF 62 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM- 139 + +P+ A+++ + A+ Y +G+ A + + +I +P NVDYVYYL G+ Sbjct: 63 EKLEARYPYGRFAQQAQIEVAYAHYKSGEPGLALAAADRFIKLHPNHPNVDYVYYLKGLV 122 Query: 140 SYAQMI--------RDVP-YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 ++ + + +D+ D + + +V R+ S Y + +R + N LA Sbjct: 123 NFNEDLGLLAGISNQDLSERDPKGAREAFDTFRELVTRFPESKYAEDSRQRMQYLVNSLA 182 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 A +V + RYY +RG ++AA R Q +A Y EEA+ +V++Y AL L D + Sbjct: 183 AHDVHVARYYYRRGAFIAAANRAQTAVATYPGTPATEEALYLMVKSYEALGLKDLQGDAE 242 Query: 251 SLIQERYPQ 259 ++Q+ +P Sbjct: 243 RVLQKNFPN 251 >gi|88707053|ref|ZP_01104749.1| competence lipoprotein ComL family protein [Congregibacter litoralis KT71] gi|88698703|gb|EAQ95826.1| competence lipoprotein ComL family protein [Congregibacter litoralis KT71] Length = 303 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 15/233 (6%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G D+ DS ++++Y++A +L +NF + +PF A ++ Sbjct: 29 GCAGNDEEDISADSG-----EQQIYDEAQRYLNARNFDLSIRALQALESRYPFGKYAEQA 83 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD-----VPYD 151 L + Y A + A + +I +P+ NVDY YY+ G++ A +D P D Sbjct: 84 QLELIYAHYGAFSPEAAIEAADRFIRLHPQHPNVDYAYYMKGLATATASQDFLSRFTPTD 143 Query: 152 Q--RAT---KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 + R T K S++V R+ +SPY A+ + RN LA E+ + YY +RG Y Sbjct: 144 KTLRDTSFAKEAFAEFSQLVTRFPDSPYAADAKSRMVYLRNLLARNEIHVANYYFRRGAY 203 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +AA R + V+ N+ + +A + + Y+ L + D A+ + + +P Sbjct: 204 LAAANRGRYVVENFQRTPAVGDGLAVMAQGYLLLGMDDLAKNAIDTLALNFPD 256 >gi|327482284|gb|AEA85594.1| competence protein ComL [Pseudomonas stutzeri DSM 4166] Length = 329 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 22/245 (8%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 + IF A C SS + +++ +V E+Y++A L ++++ A Sbjct: 9 IAIFALTAAC--------SSNETVDENLGEV----ELYQQAQADLDNKSYTSAISKLKAL 56 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYA 142 +PF A ++ L + Y + + A S E +I +P+ NVDY YYL G+ S+ Sbjct: 57 ESRYPFGRFAEQAQLELIYAYYRNAEPEAARSAAERFIRLHPQHPNVDYAYYLKGLASFD 116 Query: 143 Q----MIRDVPYDQR-----ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Q + R +P D A + +++ RY NS Y A+ + RN LAA E Sbjct: 117 QDRGLLARFLPLDMTKRDPGAARDSFNEFAQLTSRYPNSRYSPDAKARMIYLRNLLAANE 176 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + YYLKR YVAA R + V+ N+ + +A + EAY L L D A + + Sbjct: 177 IHVAHYYLKRQAYVAAANRGRYVVENFQGTPAVADGLAVMTEAYQRLGLDDLADASLKTL 236 Query: 254 QERYP 258 Q YP Sbjct: 237 QLNYP 241 >gi|331004933|ref|ZP_08328346.1| putative component of the lipoprotein assembly complex [gamma proteobacterium IMCC1989] gi|330421257|gb|EGG95510.1| putative component of the lipoprotein assembly complex [gamma proteobacterium IMCC1989] Length = 306 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 10/220 (4%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S+T+ + E+YE+ LK NF A +Y + FPF ++ + L + Y + Sbjct: 36 SLTNFGTEAELYEQVQKDLKRDNFLDAIKYLQLMEKKFPFGEYSKSAQLSLIYAHYGFDQ 95 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPYDQR---ATKLML 159 + A + +I +P+ +NVDY YY+ G+ ++ Q +V +R A + Sbjct: 96 KESATASANRFIRLHPQHRNVDYAYYMKGLISFPDAKTFLQQFFNVDLSKRDISAARSSF 155 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 + S +V+ + S Y A +T N LA E+ + YYL+R ++AA R + V+ N Sbjct: 156 NHFSTLVKLFPESEYAPDALKRMTFLHNLLARHEIHVANYYLERKAFLAAANRGRYVVEN 215 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + + +A+A +++ Y + + D A + +++ +P Sbjct: 216 FQETSAIPDALAVMIQGYHEMKMHDLAENSLEVLRTNFPN 255 >gi|289667067|ref|ZP_06488142.1| putative competence lipoprotein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 293 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 22/266 (8%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A I + + F+V + ++D D V ++Y K +++ N++ A + + Sbjct: 11 ARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVE---QLYGKGHDLMEKGNWAGAEASYKR 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +P+ ++++ SA+ QY AGK+ S + +I YP +N+ Y+YYL G+ A Sbjct: 68 LIAQYPYGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGL--A 125 Query: 143 QMIRDVPY------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 RD + D + + + + +RY NS Y AR + R+ A Sbjct: 126 NSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFA 185 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAR 247 E++ YYL+R +V+A R +L Y + + +A+A L EAY L L +AR Sbjct: 186 QHELDNALYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAMLAEAYTHLGNKTLAADAR 245 Query: 248 EVVSLIQERYP--QGYWARYVETLVK 271 V+ L ++P G W +Y + K Sbjct: 246 RVLELNDPQHPWLTGNWPKYPWAIRK 271 >gi|254785220|ref|YP_003072648.1| outer membrane assembly lipoprotein YfiO [Teredinibacter turnerae T7901] gi|237686542|gb|ACR13806.1| outer membrane assembly lipoprotein YfiO [Teredinibacter turnerae T7901] Length = 301 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 9/209 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A +L+ N+S A E +FPF A ++ L + + +Y A + + Sbjct: 35 TYNLAQKYLRSSNWSAAIEALEVMEENFPFGSYAEQAQLELIYAYFRGNEYDAAIASADR 94 Query: 120 YITQYPESKNVDYVYYLVGMS--------YAQMIRDVPY-DQRATKLMLQYMSRIVERYT 170 ++ +P+ +NVDY +Y+ G++ Y+ + D+ D K Y +++++RY Sbjct: 95 FVRLHPQHRNVDYAFYMRGIAAFHNDTAFYSMLPTDITQRDAGTAKDSFDYFAQLIDRYP 154 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 +SPY A+ + RN LA E+ + YY KR Y+AA R + V+ N+ + + Sbjct: 155 DSPYALDAQKRMIYLRNMLARYEIHVANYYFKRSAYLAAANRGRYVVENFEGTPAVPDGL 214 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQ 259 A + +AY L + D ++ ++ + +P Sbjct: 215 AVMAQAYQMLGMDDYSKSAEKVLVKNFPN 243 >gi|146283957|ref|YP_001174110.1| competence protein ComL [Pseudomonas stutzeri A1501] gi|145572162|gb|ABP81268.1| competence protein ComL [Pseudomonas stutzeri A1501] Length = 374 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 22/245 (8%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 + IF A C SS + +++ +V E+Y++A L ++++ A Sbjct: 54 IAIFALTAAC--------SSNETVDENLGEV----ELYQQAQADLDNKSYTSAISKLKAL 101 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYA 142 +PF A ++ L + Y + + A S E +I +P+ NVDY YYL G+ S+ Sbjct: 102 ESRYPFGRFAEQAQLELIYAYYRNAEPEAARSAAERFIRLHPQHPNVDYAYYLKGLASFD 161 Query: 143 Q----MIRDVPYDQR-----ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Q + R +P D A + +++ RY NS Y A+ + RN LAA E Sbjct: 162 QDRGLLARFLPLDMTKRDPGAARDSFNEFAQLTSRYPNSRYSPDAKARMIYLRNLLAANE 221 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + YYLKR YVAA R + V+ N+ + +A + EAY L L D A + + Sbjct: 222 IHVAHYYLKRQAYVAAANRGRYVVENFQGTPAVADGLAVMTEAYQRLGLDDLADASLKTL 281 Query: 254 QERYP 258 Q YP Sbjct: 282 QLNYP 286 >gi|257095461|ref|YP_003169102.1| outer membrane assembly lipoprotein YfiO [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047985|gb|ACV37173.1| outer membrane assembly lipoprotein YfiO [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 264 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 16/214 (7%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L + +++KA +YF + +P+ A+++ + A+ + + A + + Sbjct: 36 KLYAEAKDALNDGSYAKAIKYFEKLESRYPYGRYAQQAQIEIAYAYWKDQEPASAVAACD 95 Query: 119 EYITQYPESKNVDYVYYLVGM-------------SYAQMIRDVPYDQRATKLMLQYMSRI 165 +I +P NVDYVYYL G+ S M P R + + Sbjct: 96 RFIKLHPNHPNVDYVYYLRGLINFNEDLGIMGTISNQDMTERDPKGARES---FDAFREL 152 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V R+ +S Y A + N LA+ E+ + RYY+KRG Y+AA R Q + NY DA Sbjct: 153 VTRFPDSKYTPDALLRMKYLVNALASLELHVARYYMKRGAYLAAANRAQYAVKNYPDAPA 212 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 EEA+ +V+AY +L L D + +++ YP Sbjct: 213 TEEALFIMVKAYDSLGLNDLRDDAERVMRTNYPN 246 >gi|307543918|ref|YP_003896397.1| lipoprotein [Halomonas elongata DSM 2581] gi|307215942|emb|CBV41212.1| K05807 putative lipoprotein [Halomonas elongata DSM 2581] Length = 269 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 10/211 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y++ L++ ++ A +PF A ++ L + Y ++ A + Sbjct: 38 QLYQEGRAALEDGRYTTAVNRLEAIDTRYPFGEHAEQAQLELIYAYYETSDWEAARAAAS 97 Query: 119 EYITQYPESKNVDYVYYLVGMS----------YAQMIRDVPYDQRATKLMLQYMSRIVER 168 +I +P+ VDY YY+ G++ ++I D AT+ +V R Sbjct: 98 RFIRLHPDHPQVDYAYYMRGLAAWEAGRFSLESLRLIDISKRDLGATRDAYSDFRDLVRR 157 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y AR + RN LA E+E+ +YL++G Y+AA+ R + V+ +Y +AE + Sbjct: 158 YPNSQYAPDARQRIVYLRNLLAQHELEVADFYLRKGAYLAAVKRGRWVIEHYPEAESTRD 217 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259 A+A +VE Y+ L + + A+E + ++ E P Sbjct: 218 ALAVMVEGYLGLDMPERAKESLRVLIENAPN 248 >gi|256257866|ref|ZP_05463402.1| COML, competence lipoprotein [Brucella abortus bv. 9 str. C68] gi|260884156|ref|ZP_05895770.1| competence protein ComL [Brucella abortus bv. 9 str. C68] gi|260873684|gb|EEX80753.1| competence protein ComL [Brucella abortus bv. 9 str. C68] Length = 125 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 44/89 (49%), Positives = 60/89 (67%) Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y A+ + V R+QLA KE++IGRYYL+R EY+AAI RF+ V+ YS+ EEA+ARL Sbjct: 2 YTDDAKTKIRVARDQLAGKEMQIGRYYLERKEYLAAIKRFRGVVEEYSNTRQVEEALARL 61 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYW 262 VEAY AL L EA+ S++ + +P W Sbjct: 62 VEAYYALGLTSEAQMAASVLGKNFPDSQW 90 >gi|289662939|ref|ZP_06484520.1| putative competence lipoprotein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 293 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 22/266 (8%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A I + + F+V + ++D D V ++Y K +++ N++ A + + Sbjct: 11 ARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVE---QLYGKGHDLMEKGNWAGAEASYKR 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +P+ ++++ SA+ QY AGK+ S + +I YP +N+ Y+YYL G+ A Sbjct: 68 LIAQYPYGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGL--A 125 Query: 143 QMIRDVPYDQRATKL------------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 RD + +R L + + +RY NS Y AR + R+ A Sbjct: 126 NSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFA 185 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAR 247 E++ YYL+R +V+A R +L Y + + +A+A L EAY L L +AR Sbjct: 186 QHELDNALYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADAR 245 Query: 248 EVVSLIQERYP--QGYWARYVETLVK 271 V+ L ++P G W +Y + K Sbjct: 246 RVLELNDPQHPWLTGNWPKYPWAIRK 271 >gi|56478104|ref|YP_159693.1| putative competence lipoprotein precursor [Aromatoleum aromaticum EbN1] gi|56314147|emb|CAI08792.1| putative competence lipoprotein precursor [Aromatoleum aromaticum EbN1] Length = 265 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 67/250 (26%), Positives = 115/250 (46%), Gaps = 15/250 (6%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 A F S+AV + S +D QR +Y +A F+ E + +A + F Sbjct: 1 MARVTFRSLAVIAALLLGGCGSMPEQIDETAGWNAQR-LYSEAKTFMNEGAYEQAIKLFE 59 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + +P+ A+++ + A+ QY +G+ A + + +I +P N DY YYL G+ Sbjct: 60 KLEARYPYGRYAQQAQIEVAYAQYKSGEPALAIAAADRFIKLHPNHPNADYAYYLKGL-- 117 Query: 142 AQMIRDVPY------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 A D+ D + + ++V+R+ S Y + A + N L Sbjct: 118 ATFNEDLGLLAGLSNQDLSERDPKGAQESFDTFGQLVKRFPESRYAEDAGQRMQYLVNSL 177 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AA EV + RYY +RG YVAA+ R + L Y A AEEA+ LV++Y L + + + Sbjct: 178 AAHEVHVARYYYRRGAYVAAVNRARTALETYPQAPAAEEALFVLVKSYDTLGMTELRDDA 237 Query: 250 VSLIQERYPQ 259 ++++ +P Sbjct: 238 DRVMRKNFPN 247 >gi|325916248|ref|ZP_08178529.1| outer membrane assembly lipoprotein YfiO [Xanthomonas vesicatoria ATCC 35937] gi|325537542|gb|EGD09257.1| outer membrane assembly lipoprotein YfiO [Xanthomonas vesicatoria ATCC 35937] Length = 293 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 22/266 (8%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A I + + F+V + ++D D V ++Y K +++ N++ A + + Sbjct: 11 ARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVE---QLYGKGHGLMEKGNWAGAEASYKR 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +P+ ++++ +A+ QY AGK+ S + +I YP +N+ Y+YYL G+ A Sbjct: 68 LIAQYPYGPYTEQAMIETAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGL--A 125 Query: 143 QMIRDVPYDQRATKL------------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 RD + +R L + + +RY NS Y AR + R+ A Sbjct: 126 NSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAPDARKRMIELRDVFA 185 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAR 247 E++ YYL+R +V+A R +L Y + + +A+A L EAY L L +AR Sbjct: 186 QHELDNALYYLRRNAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADAR 245 Query: 248 EVVSLIQERYP--QGYWARYVETLVK 271 V+ L ++P G W +Y + K Sbjct: 246 RVLELNSPQHPWLTGNWPKYPWAIRK 271 >gi|288940533|ref|YP_003442773.1| outer membrane assembly lipoprotein YfiO [Allochromatium vinosum DSM 180] gi|288895905|gb|ADC61741.1| outer membrane assembly lipoprotein YfiO [Allochromatium vinosum DSM 180] Length = 275 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 13/207 (6%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L ++ A E + + +PF A ++ L A+ Y A + + A + + Sbjct: 37 KLYSEAATELDAGSYEHAIELYQKLEARYPFGRYAMQAQLDVAYAHYRAEEPEDALAAAD 96 Query: 119 EYITQYPESKNVDYVYYLVGM-----SYAQMIRDVPYD--QRATKLMLQYMSR---IVER 168 +I YP++ VDY YYL G+ S + R +P D QR L +VER Sbjct: 97 RFIKLYPQNPYVDYAYYLKGIVNYNRSIGFLDRFIPTDASQRDPGSALDAFKDFAILVER 156 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y + AR + R+ LA EV + RYY+KRG Y+AA R V+ +Y ++ Sbjct: 157 FPNSKYAEDARQRMVYLRSNLAMNEVHVARYYMKRGAYLAAANRANHVIQHYQRTSAVDD 216 Query: 229 AMARLVEAYVALALMD---EAREVVSL 252 A+ L++AY AL D +A+ V+ L Sbjct: 217 ALEVLIDAYRALGKDDLAADAKRVLDL 243 >gi|92112629|ref|YP_572557.1| competence lipoprotein ComL, putative [Chromohalobacter salexigens DSM 3043] gi|91795719|gb|ABE57858.1| competence lipoprotein ComL, putative [Chromohalobacter salexigens DSM 3043] Length = 268 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 10/214 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++E+Y++A L +S A +PF A ++ L + Y ++QA + Sbjct: 33 EQELYQQAQSALDAGRYSTAVTRLEALDTRYPFGRYAEQAQLELIYAYYQTEDWEQARAA 92 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIR---------DVPY-DQRATKLMLQYMSRIV 166 +I +P+ VDY YY+ G++ Q R D+ D AT+ +V Sbjct: 93 ASRFIRLHPDHAQVDYAYYMRGLAAYQAGRFSLEGLELIDISKRDLGATRDANVDFGELV 152 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 R+ +SPY AR + RN L+ E+++ +YL++G Y+AAI R + VL +Y Sbjct: 153 RRFPDSPYAADARQRIVYLRNVLSRHELQVADFYLRKGAYLAAINRGEWVLQHYPQTPAT 212 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 +A+A +VE Y+ L + D AR V+ + + P Sbjct: 213 RDALAVMVEGYLGLDMRDRARTVLQTLIKNDPDN 246 >gi|21243944|ref|NP_643526.1| competence lipoprotein [Xanthomonas axonopodis pv. citri str. 306] gi|78048899|ref|YP_365074.1| putative competence lipoprotein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|294625814|ref|ZP_06704431.1| competence lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666974|ref|ZP_06732203.1| competence lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325929043|ref|ZP_08190198.1| outer membrane assembly lipoprotein YfiO [Xanthomonas perforans 91-118] gi|21109554|gb|AAM38062.1| competence lipoprotein [Xanthomonas axonopodis pv. citri str. 306] gi|78037329|emb|CAJ25074.1| putative competence lipoprotein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|292599889|gb|EFF44009.1| competence lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603263|gb|EFF46685.1| competence lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325540576|gb|EGD12163.1| outer membrane assembly lipoprotein YfiO [Xanthomonas perforans 91-118] Length = 293 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 22/266 (8%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A I + + F+V + ++D D V ++Y K +++ N++ A + + Sbjct: 11 ARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVE---QLYGKGHNLMEKGNWAGAEASYKR 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +P+ ++++ +A+ QY AGK+ A S + +I YP +N+ Y+YYL G+ A Sbjct: 68 LIAQYPYGPYTEQAMIETAYAQYKAGKHDDAVSSVDRFIRTYPTHRNISYLYYLRGL--A 125 Query: 143 QMIRDVPY------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 RD + D + + + + +RY NS Y AR + R+ A Sbjct: 126 NSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDIFA 185 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAR 247 E++ YYL+R +V+A R +L Y + +A+A L EAY L L +AR Sbjct: 186 QHELDNALYYLRRDAWVSAAGRANYLLETYPQSAFQYDAVAVLAEAYTHLGNKTLAADAR 245 Query: 248 EVVSLIQERYP--QGYWARYVETLVK 271 V+ L ++P G W +Y + K Sbjct: 246 RVLELNDPQHPWLTGNWPKYPWAIRK 271 >gi|291614497|ref|YP_003524654.1| outer membrane assembly lipoprotein YfiO [Sideroxydans lithotrophicus ES-1] gi|291584609|gb|ADE12267.1| outer membrane assembly lipoprotein YfiO [Sideroxydans lithotrophicus ES-1] Length = 264 Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 14/208 (6%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y KA ++++N+ KA + F +P+ A+++ + A+ Y + A + + Sbjct: 31 ELYAKAQASMQDENYEKAVKQFETLQSRYPYGRYAQQAQMEIAYAYYKHSEPAPAIAALD 90 Query: 119 EYITQYPESKNVDYVYYLVGMS---------YAQMIRDVPYDQRATKLMLQYMS--RIVE 167 + YP S ++DYV YL G+ + M + P ++ + L + S +V Sbjct: 91 HFAKMYPMSTHLDYVLYLKGLINFNENINSLFGTMFKQDPSERDPSALRESFNSFKELVT 150 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 R+ +S Y A+ + N LA+ E+ I YYL+RG YVAA R + VL ++ + Sbjct: 151 RFPDSKYAPDAKLRMQYLLNSLASSEIHIASYYLRRGAYVAAANRAKSVLIDFPNTPQTR 210 Query: 228 EAMARLVEAYVALA---LMDEAREVVSL 252 EA+ LV+AY A+ L D+ + V+SL Sbjct: 211 EALQILVQAYDAMGMEVLRDDTQRVLSL 238 >gi|257453789|ref|ZP_05619067.1| DNA uptake lipoprotein [Enhydrobacter aerosaccus SK60] gi|257448716|gb|EEV23681.1| DNA uptake lipoprotein [Enhydrobacter aerosaccus SK60] Length = 360 Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 23/261 (8%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVY--LDSVTDVRYQREV---YEKAVLFLKEQ 71 + L K ++A+ L G + + ++ D V + ++ Y+ A +K+ Sbjct: 2 HHLSKVVGVTAITVALTTLSGCQTLKNSKLFGGKDEVVATKAEKSEQGYYQAASDNIKKG 61 Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N +KA N +P + ++LL + QY G Y A + + +I YP + VD Sbjct: 62 NLAKAISQLNDLRTFYPVGDYSEQALLDLMYAQYQHGDYLDAIASADRFIQSYPSNPQVD 121 Query: 132 YVYYLVGMSYAQMI--------------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 Y YY+ G+S Q RD+ Y +++ +++ R+ NS Y Sbjct: 122 YAYYVRGISNMQAASGGVMKYTKLNPAHRDMGY----SRIAFNNFQQLINRFPNSAYAPD 177 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A + NQL+ E+++ R+Y+KR YVAA R + V Y +E E++A + +Y Sbjct: 178 AALRMRYIYNQLSESEMDVARWYIKRKAYVAAANRAKWVFQYYPQSEAIPESIATIAYSY 237 Query: 238 VALALMDEAREVVSLIQERYP 258 L + D A + L++ YP Sbjct: 238 DKLGMTDTANQYKQLLRINYP 258 >gi|326316816|ref|YP_004234488.1| outer membrane assembly lipoprotein YfiO [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373652|gb|ADX45921.1| outer membrane assembly lipoprotein YfiO [Acidovorax avenae subsp. avenae ATCC 19860] Length = 265 Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 10/215 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A L ++ KA F + +A+++ L A+ QY G+ QA + + Sbjct: 37 IYSEARDELNSNSYDKAVPLFEKLEGRAAGTPLAQQAQLEKAYAQYKGGEKAQAIATLDR 96 Query: 120 YITQYPESKNVDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 ++ +P S DY YL G+ S+ DQ+A K + +V R+ Sbjct: 97 FMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLSRQDLSERDQKAAKDSFESFRELVTRF 156 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 +S Y + A+ +T N LA EV + RYY +RG YVAAI R Q+ LA+Y D EEA Sbjct: 157 PDSRYARDAQQRMTYIVNSLAQYEVHVARYYYQRGAYVAAINRAQIALADYKDVPALEEA 216 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 + L+++Y AL + + ++ YPQ + R Sbjct: 217 LYILIKSYDALGMTQLRDDAQRVMAASYPQSEYMR 251 >gi|93005954|ref|YP_580391.1| putative lipoprotein (DUF0169) [Psychrobacter cryohalolentis K5] gi|92393632|gb|ABE74907.1| putative lipoprotein (DUF0169) [Psychrobacter cryohalolentis K5] Length = 359 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 9/218 (4%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 VT + ++ Y A+ + + +++A E +P A +SLL + QY++GKY Sbjct: 42 VTAEKSEQAYYNDAIAQIDKGRYTQAIEDLTNLRTFYPTGQYAEQSLLDMMYAQYASGKY 101 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ---------MIRDVPYDQRATKLMLQY 161 + AA+ E++I YP + V Y YY+ G++ Q + D ++ Sbjct: 102 ETAAASAEQFIRLYPSNPQVSYAYYVRGVANMQGSSEGLKLFKLNQAERDTAYYRIAFAN 161 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 ++ +Y NSPY A +T NQ A E+ +Y++R YVAA+ R + V Y Sbjct: 162 FQELLNKYPNSPYAPDAAQRMTFIYNQFAESEMSAANWYIEREAYVAAVNRAKWVFQYYP 221 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +E +A+A L ++ L L D A E +L+Q YP Sbjct: 222 LSESVPDAIAVLAYSHEKLGLTDLANEYKTLLQINYPN 259 >gi|153006273|ref|YP_001380598.1| tetratricopeptide domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152029846|gb|ABS27614.1| Tetratricopeptide domain protein [Anaeromyxobacter sp. Fw109-5] Length = 258 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 14/210 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE V LK NFS+A ++F FPF+ A S L A +++ +Y +AA +++ Sbjct: 37 YEAGVDELKHDNFSEAVKFFEYVRTKFPFSKYAPLSELRLADLKFDQERYVEAAEAYQQF 96 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVP-----------YDQRATKLMLQYMSRIVERY 169 +T +P + V+Y VG+SY +RD P DQR + + + V+ Sbjct: 97 VTMHPTHEEVEYAELRVGLSY---LRDAPGDFVLFPPAHEKDQRQVEKAARALRDFVQAK 153 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 +S + AR + +LA+ E +G YY KR + A R++ ++A Y + H EA Sbjct: 154 PDSKHAPQARKLLAEAEGRLASHEWYVGEYYFKRKRWAGAAGRYEALVAKYPGSRHEAEA 213 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQ 259 + +L +Y+ + AR + + ++PQ Sbjct: 214 LMKLARSYLEIDEKHRARTALQKLIVKHPQ 243 >gi|33592278|ref|NP_879922.1| competence lipoprotein precursor [Bordetella pertussis Tohama I] gi|33597726|ref|NP_885369.1| competence lipoprotein precursor [Bordetella parapertussis 12822] gi|33602574|ref|NP_890134.1| competence lipoprotein precursor [Bordetella bronchiseptica RB50] gi|33571923|emb|CAE41443.1| competence lipoprotein precursor [Bordetella pertussis Tohama I] gi|33574154|emb|CAE38484.1| competence lipoprotein precursor [Bordetella parapertussis] gi|33577013|emb|CAE34093.1| competence lipoprotein precursor [Bordetella bronchiseptica RB50] gi|332381695|gb|AEE66542.1| competence lipoprotein precursor [Bordetella pertussis CS] Length = 266 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 10/211 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y A + N++ A E +PF A+++L+ A+V + G+ +QA + + Sbjct: 35 QLYADAKQEVAAGNWTDARERLTAIESRYPFGTYAQQALIELAYVNWKDGENEQALAAID 94 Query: 119 EYITQYPESKNVDYVYYLVGMS--------YAQMIRDVPYDQRATKLMLQY--MSRIVER 168 + YP DYV YL G+ + + P ++ L Y + +V+R Sbjct: 95 RFQQLYPNHPGTDYVLYLKGLVNFTPASAFMSNLTGQDPAERDPKGLRASYDAFNELVQR 154 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A+ +T N +A EV + RYY +RG YVAA R Q V+ ++ A +EE Sbjct: 155 FPNSKYTPDAQKRMTWLVNAIAMNEVHVARYYYERGAYVAAANRAQTVITDFEGAPASEE 214 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259 A+ +VE+Y L + + + ++ + YP Sbjct: 215 ALYIMVESYDKLGMTELKGDAERVLDQNYPN 245 >gi|304309990|ref|YP_003809588.1| competence lipoprotein ComL [gamma proteobacterium HdN1] gi|301795723|emb|CBL43922.1| competence lipoprotein ComL [gamma proteobacterium HdN1] Length = 272 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 10/213 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +R+ YE A LK++ FS+A E + +PF A ++ L + Y + Y + Sbjct: 28 ERQYYEDAQKALKDEQFSRAVERLEALNARYPFGRYAEQAQLDLVYAYYRSMDYASSGVT 87 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-------PYDQR---ATKLMLQYMSRIV 166 E +I +P+ +DY YY+ G+S + R + Y +R K SR++ Sbjct: 88 AERFIRMHPDHTELDYAYYMKGLSTYSVDRGIFERFIPSDYSERDLEPAKESFNDFSRLL 147 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 R+ NS Y AR + RN A E++ + ++RG YVA+ R + V+ N+ Sbjct: 148 NRFPNSIYAPDARKRMVYLRNLFAEHELKAAHWNMRRGAYVASANRARYVVENFDRTPAM 207 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 E +A L ++Y L L D A + + ++ YP Sbjct: 208 AEGLAILYKSYRELGLNDLANDTLKVLVSNYPH 240 >gi|320326248|gb|EFW82302.1| competence lipoprotein ComL [Pseudomonas syringae pv. glycinea str. B076] gi|320330672|gb|EFW86649.1| competence lipoprotein ComL [Pseudomonas syringae pv. glycinea str. race 4] gi|330881341|gb|EGH15490.1| competence lipoprotein ComL [Pseudomonas syringae pv. glycinea str. race 4] Length = 340 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/228 (28%), Positives = 115/228 (50%), Gaps = 14/228 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 19 SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153 + Y G+ + A S E +I +P+ NVDY YY+ G+ S+ Q + R +P DQ Sbjct: 75 YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134 Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 A + +++ R+ NS Y A+ + R+ LA+ E+ + YYL R YVAA Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRSLLASYEIHVADYYLTRQAYVAAAN 194 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|254468028|ref|ZP_05081434.1| competence lipoprotein ComL [beta proteobacterium KB13] gi|207086838|gb|EDZ64121.1| competence lipoprotein ComL [beta proteobacterium KB13] Length = 268 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 68/249 (27%), Positives = 116/249 (46%), Gaps = 19/249 (7%) Query: 24 LTIFFS---IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 LT+F S +A CF+ G + D T + +Y KA F +++F K +Y Sbjct: 5 LTLFISSIFLAGCFIFGEPTE------FDETTG-QSPEWIYGKAEAFTDQRDFRKTIDYL 57 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + + +P + + L A+ Y G+ + + S ++IT YP ++DY YYL G++ Sbjct: 58 EKLVKRYPDNKLIPSARLNLAYAYYKFGQKELSTSTVNQFITLYPSHPSMDYAYYLKGLN 117 Query: 141 YAQ--------MIRDVP-YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Q ++D+ D K S +V++Y NS Y + + + N++A Sbjct: 118 LYQERGIINKLTMQDISDRDVNNLKQAFDAFSELVKKYPNSKYSQDSTDRMIYLMNKIAE 177 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 ++ + RYY+KR YVAA+ R + V Y ++ H EE++ AY L L D Sbjct: 178 YDLHVARYYMKRRAYVAALNRAKNVYTTYPESIHVEESLVIQYIAYKELKLKDLEIATKK 237 Query: 252 LIQERYPQG 260 +I YP+ Sbjct: 238 VIDLNYPEN 246 >gi|270156941|ref|ZP_06185598.1| putative competence lipoprotein ComL [Legionella longbeachae D-4968] gi|289164633|ref|YP_003454771.1| competence lipoprotein comL precursor [Legionella longbeachae NSW150] gi|269988966|gb|EEZ95220.1| putative competence lipoprotein ComL [Legionella longbeachae D-4968] gi|288857806|emb|CBJ11652.1| putative competence lipoprotein comL precursor [Legionella longbeachae NSW150] Length = 257 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/258 (28%), Positives = 115/258 (44%), Gaps = 17/258 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 L+ FAL + S+A C W + D +S ++Y + L ++ ++ A + Sbjct: 7 LFLFALIV--SLAAC--KSWWHKDEED---NSPYKGMTAEQLYTASQKDLHKKEYATAIK 59 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + +PF+ KS L + Y Y AA+ E +I YP ++NVDY YY+ G Sbjct: 60 HLEAIETMYPFSDYTEKSQLDLIYAYYKNEDYPAAAATAERFIHLYPRARNVDYAYYMKG 119 Query: 139 MSYAQMIRDV-----PYDQ--RATKLMLQYMSR---IVERYTNSPYVKGARFYVTVGRNQ 188 M+ Q R V P D+ R +Q S +V+++ +S Y A +T RN Sbjct: 120 MANFQQTRGVFAKFLPLDESWRDPGTQIQAYSDFGILVQKFPDSKYKANALQRMTYLRNM 179 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 A E+ +Y KR YVAAI R V+ NY A ++A+ + E+ AL A E Sbjct: 180 FAQHELNASTFYFKRKMYVAAIERANYVVKNYPQAPSVKQALVVMYESNKALGFNKAAEE 239 Query: 249 VVSLIQERYPQGYWARYV 266 +S+ Y R V Sbjct: 240 ALSIYNATYHTNKMERIV 257 >gi|189183077|ref|YP_001936862.1| ComL-like lipoprotein [Orientia tsutsugamushi str. Ikeda] gi|189179848|dbj|BAG39628.1| ComL-like lipoprotein [Orientia tsutsugamushi str. Ikeda] Length = 264 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/258 (20%), Positives = 128/258 (49%), Gaps = 16/258 (6%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 +++F T+F + + + ++ + L + + Y +A L +++ ++ A Sbjct: 13 NMFRFICTLFVLLCFTNCIVFAKEKTTITCLS-------EDDAYSRAELLFQKKKYNAAA 65 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + F + A K+ LM + Y AG+Y +A+ + + +I +P + + VYYL Sbjct: 66 KQFFDIFVQHLGSNTATKAELMRGYSLYLAGQYSEASEVLDNFIRLHPVHQKIADVYYLK 125 Query: 138 GMS-YAQMIRDVPYDQRATKLMLQY---MSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 ++ Y Q ++Q+ + +L + ++++++ S + A+ + V LA + Sbjct: 126 ALAEYKQ-----AHNQQDLEQLLHARLELQQVIDKFPKSDFAIKAKEKINVISKNLAGSQ 180 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 ++IG++YL + +AA+ RF V+ YS + EA+ R+ ++Y L E +E ++++ Sbjct: 181 IDIGKFYLNKKNPIAALNRFNTVVDKYSHTSYYPEAIYRIAQSYALLGRKQEMKEQLAIL 240 Query: 254 QERYPQGYWARYVETLVK 271 ++P W++ +L++ Sbjct: 241 NSKFPNSTWSKRASSLLQ 258 >gi|331008768|gb|EGH88824.1| competence lipoprotein ComL [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 340 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/228 (28%), Positives = 114/228 (50%), Gaps = 14/228 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 19 SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153 + Y G+ + A S E +I +P+ NVDY YY+ G+ S+ Q + R +P DQ Sbjct: 75 YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134 Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 A + +++ R+ NS Y A+ + RN LA+ E+ + Y L R YVAA Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYSLTRQAYVAAAN 194 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 195 RGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|120611899|ref|YP_971577.1| hypothetical protein Aave_3241 [Acidovorax citrulli AAC00-1] gi|120590363|gb|ABM33803.1| putative transmembrane protein [Acidovorax citrulli AAC00-1] Length = 265 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 10/215 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A L ++ KA F + +A+++ L A+ QY G+ QA + + Sbjct: 37 IYSEARDELNSNSYDKAVPLFEKLEGRAAGTPLAQQAQLEKAYAQYKGGEKAQAIATLDR 96 Query: 120 YITQYPESKNVDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 ++ +P S DY YL G+ S+ DQ+A K + + R+ Sbjct: 97 FMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLSRQDLSERDQKAAKDSFESFRELTTRF 156 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 +S Y + A+ +T N LA EV + RYY +RG YVAAI R Q+ LA+Y D EEA Sbjct: 157 PDSRYARDAQQRMTYIVNSLAQYEVHVARYYYQRGAYVAAINRAQIALADYKDVPALEEA 216 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 + L+++Y AL + + ++ YPQ + R Sbjct: 217 LYILIKSYDALGMTQLRDDAQRVMAASYPQSEYMR 251 >gi|325921579|ref|ZP_08183424.1| outer membrane assembly lipoprotein YfiO [Xanthomonas gardneri ATCC 19865] gi|325547933|gb|EGD18942.1| outer membrane assembly lipoprotein YfiO [Xanthomonas gardneri ATCC 19865] Length = 293 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 19/230 (8%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y K+ +++ N++ A + + +P+ ++++ +A+ QY AGK+ S + Sbjct: 44 QLYGKSHGLMEKGNWAGAEASYKRLIAQYPYGPYTEQAMIETAYAQYKAGKHDDTVSSVD 103 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL------------MLQYMSRIV 166 +I YP +N+ Y+YYL G+ A RD + +R L + + Sbjct: 104 RFIRTYPTHRNISYLYYLRGL--ANSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVT 161 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 +RY NS Y AR + R+ A E++ YYL+R +V+A R +L Y + + Sbjct: 162 DRYPNSRYAPDARKRMIELRDVFAQHELDNALYYLRRNAWVSAAGRANYLLETYPQSAYQ 221 Query: 227 EEAMARLVEAYVALA---LMDEAREVVSLIQERYP--QGYWARYVETLVK 271 +A+A L EAY L L +AR V+ L ++P G W +Y + K Sbjct: 222 YDAVAVLAEAYTHLGNKTLAADARRVLELNSPQHPWLTGNWPKYPWAIRK 271 >gi|52425875|ref|YP_089012.1| NrfG protein [Mannheimia succiniciproducens MBEL55E] gi|52307927|gb|AAU38427.1| NrfG protein [Mannheimia succiniciproducens MBEL55E] Length = 297 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/208 (24%), Positives = 104/208 (50%), Gaps = 10/208 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++E++ +L+E N+++A Y FP + + ++ L F Y + Y + + Sbjct: 32 EQELFSTGANYLQEGNYTQATRYLEAVDSRFPGSSYSEQAELNLIFSTYKSQDYTKTLTT 91 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----QRAT------KLMLQYMSRIV 166 + ++ Q+P+S+++DYV Y+ ++ + + ++ D R+T K +V Sbjct: 92 ADRFLQQFPQSQHLDYVLYMAALTNSALGDNLFQDFFGVDRSTRETTSMKTAFNNFQTLV 151 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + + NSPY A + +++LA E+EI ++Y KR +VA R +L +Y D + Sbjct: 152 QNFPNSPYTPDALARMAYIKDRLARHELEIAKFYAKRSAWVATSNRITGMLRSYPDTQAT 211 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQ 254 EA+ L E+Y + L A + +L++ Sbjct: 212 LEALPLLQESYEKMGLTQLASQAATLVK 239 >gi|171463621|ref|YP_001797734.1| putative transmembrane protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193159|gb|ACB44120.1| putative transmembrane protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 295 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 14/220 (6%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 TD+ + ++Y +A L + +F+K +YF + FPF ++++ + +A+ + A + Sbjct: 56 TDIWSEAKLYSEATDKLNDADFAKCGKYFEKLEARFPFGPYSQQAQINAAYCYWKAQEQT 115 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY------------DQRATKLML 159 QA + +I + S N+DY YYL G+ D+ + D +A K Sbjct: 116 QALVAIDRFIKLHQGSPNLDYAYYLKGL--ITFNDDLGWLGKFTGQDLSERDPKAAKEAF 173 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 + +VER+ NS Y A + N LA +V + R+Y +RG Y+AA R QLV+ + Sbjct: 174 ESFKVVVERFPNSKYTPDAIDRMRYIVNSLAEADVIVARFYYQRGAYLAAANRAQLVIRD 233 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y A EEA+ L ++Y L + +++ + + +P Sbjct: 234 YDRAPAVEEALYILTKSYEKLGMTQLSKDSARVFKLNFPD 273 >gi|21232519|ref|NP_638436.1| competence lipoprotein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767397|ref|YP_242159.1| competence lipoprotein [Xanthomonas campestris pv. campestris str. 8004] gi|188990498|ref|YP_001902508.1| putative outer membrane lipoprotein [Xanthomonas campestris pv. campestris str. B100] gi|21114310|gb|AAM42360.1| competence lipoprotein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572729|gb|AAY48139.1| competence lipoprotein [Xanthomonas campestris pv. campestris str. 8004] gi|167732258|emb|CAP50450.1| putative outer membrane lipoprotein [Xanthomonas campestris pv. campestris] Length = 293 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 22/260 (8%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A I + + F+V + ++D D V ++Y K +++ N++ A + + Sbjct: 11 ARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVE---QLYGKGHGLMEKGNWAGAEASYKR 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +P+ ++++ +A+ QY AGK+ S + +I YP +N+ Y+YYL G+ A Sbjct: 68 LIAQYPYGPYTEQAMIETAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGL--A 125 Query: 143 QMIRDVPY------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 RD + D + + + + +RY NS Y AR + R+ A Sbjct: 126 NSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAPDARKRMIELRDIFA 185 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAR 247 E++ YYL+R +V+A R +L Y + +A+A L EAY L L +AR Sbjct: 186 QHELDNALYYLRRDAWVSAAGRANYLLETYPQSAFQYDAVAVLAEAYTHLGNKTLAADAR 245 Query: 248 EVVSLIQERYP--QGYWARY 265 V+ L ++P G W +Y Sbjct: 246 RVLELNSPQHPWLTGDWPKY 265 >gi|30248521|ref|NP_840591.1| TPR repeat-containing protein [Nitrosomonas europaea ATCC 19718] gi|30138407|emb|CAD84417.1| TPR repeat [Nitrosomonas europaea ATCC 19718] Length = 255 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 14/206 (6%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 L E N++ A + F +P+ A+++ L A+ Y ++ A + E +I YP Sbjct: 31 LNEGNYAAAVKLFEALEARYPYGRYAQQAQLEIAYAYYKDQEHASAIAAAERFIQLYPHH 90 Query: 128 KNVDYVYYLVGM-------------SYAQMIRDVP-YDQRATKLMLQYMSRIVERYTNSP 173 +N+DY YY+ G+ ++ + +D+ D +A++ + + ++V RY +S Sbjct: 91 QNIDYAYYIKGLASFNDDQGLMGYITHKIIKQDMSERDAKASRESFESLKQLVTRYPDSK 150 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y A + N LA E+ + +YY+KR YVAAI R Q +L Y E+A+ + Sbjct: 151 YTPDALQRMAYLVNALARGEIHVAQYYMKRKAYVAAIKRAQFILEEYPQTPATEDALYIM 210 Query: 234 VEAYVALALMDEAREVVSLIQERYPQ 259 AY L + D +V +I++ +P+ Sbjct: 211 AVAYGELGMTDLREDVEKVIRKNFPE 236 >gi|297183635|gb|ADI19761.1| hypothetical protein [uncultured gamma proteobacterium EB000_37F04] Length = 256 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 18/213 (8%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A LK +NFS A +PF A ++ L + YSA ++ A + Sbjct: 1 MYREAQRHLKNENFSLAVRSLQGLESRYPFGQYAEQAQLELIYAHYSAYEFAAANEAADR 60 Query: 120 YITQYPESKNVDYVYYLVGMS--------YAQMI------RDVPYDQRATKLMLQYMSRI 165 +I +P +VDY YY+ G++ +++ I RDV + Q A +++ Sbjct: 61 FIRLHPRHPSVDYAYYMKGLAAYDIEPGFFSRFIPSDDTKRDVSHIQTA----FAEFAQL 116 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 + R+ +S Y AR + RN LA E+ + YY +RG Y+AA+ R + V+ + Sbjct: 117 LARFPDSAYAPDARQRMVHMRNMLARNEIHVANYYFRRGAYMAALNRGKYVVEHMQQTPS 176 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 + +A + +AY+ L L D A + ++++ E YP Sbjct: 177 VADGLAIMGQAYLLLGLNDLAEDSIAVLCENYP 209 >gi|300691370|ref|YP_003752365.1| lipoprotein, ComL family, tetratricopeptide repeats (TPR) domain [Ralstonia solanacearum PSI07] gi|299078430|emb|CBJ51082.1| putative lipoprotein, ComL family, tetratricopeptide repeats (TPR) domain [Ralstonia solanacearum PSI07] Length = 277 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 10/212 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++Y +A L ++SKA +Y+ + +PF A+++ + +A+ Y G+ A + Sbjct: 47 NKLYSEAKDALDGGDYSKAVKYYEKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAV 106 Query: 118 EEYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVE 167 + +I +P +VDY YYL G+ ++ + +D+ D +A + ++ Sbjct: 107 DRFIQLHPNHPSVDYAYYLKGLINFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLIT 166 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 R+ NS Y A + N +A EV+ RYY +RG Y+AA R Q + +Y A E Sbjct: 167 RFPNSKYTPDAAQRMQYIVNAMADHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVE 226 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 EA+ ++++Y AL + D + +I++ YP Sbjct: 227 EALYIMMKSYEALGMKDLHDDTERIIKQNYPN 258 >gi|300703939|ref|YP_003745541.1| lipoprotein [Ralstonia solanacearum CFBP2957] gi|299071602|emb|CBJ42926.1| putative lipoprotein, ComL family, tetratricopeptide repeats (TPR) domain [Ralstonia solanacearum CFBP2957] Length = 277 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 10/211 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L ++SKA +Y+ + +PF A+++ + +A+ Y G+ A + + Sbjct: 48 KLYSEAKDALDGGDYSKAVKYYEKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAVD 107 Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVER 168 +I +P +VDY YYL G+ ++ + +D+ D +A + ++ R Sbjct: 108 RFIQLHPNHPSVDYAYYLKGLINFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLITR 167 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A + N +A EV+ RYY +RG Y+AA R Q + +Y A EE Sbjct: 168 FPNSKYTPDAAQRMQYIVNAMAEHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVEE 227 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259 A+ ++++Y AL + D + +I++ YP Sbjct: 228 ALYIMMKSYEALGMKDLRDDTERIIKQNYPN 258 >gi|34497648|ref|NP_901863.1| competence lipoprotein ComL [Chromobacterium violaceum ATCC 12472] gi|34103504|gb|AAQ59866.1| competence lipoprotein ComL [Chromobacterium violaceum ATCC 12472] Length = 264 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 20/216 (9%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L N+++A + + FP+ A+++ + A+ Y G+ + A + + Sbjct: 34 KLYSEAHDELNSGNYTRAVKLYETLEARFPYGRYAQQAQMDLAYTHYKDGEPELAIASAD 93 Query: 119 EYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSRIV 166 +I +P N+DY+YYL G+ Y Q + + D RA + + Sbjct: 94 RFIKLHPTHPNLDYIYYLKGLVYYNDDSGLLAKWAGQDMSER--DPRAAREAFAAFRELT 151 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 R+ +S Y A+ + + L E+ + RYY+KRG Y+AA R Q V+ +Y++ ++ Sbjct: 152 TRFPSSSYAPDAKAKMIRLVDALGGNEMHVARYYMKRGAYLAAANRAQGVVKDYANTKYP 211 Query: 227 EEAMARLVEAYVAL---ALMDEAREVVSLIQERYPQ 259 EEA+A +V AY L L D+AR V++L YPQ Sbjct: 212 EEALAIMVAAYDKLQLPQLRDDARRVLAL---NYPQ 244 >gi|207743016|ref|YP_002259408.1| dna uptake lipoprotein [Ralstonia solanacearum IPO1609] gi|206594413|emb|CAQ61340.1| dna uptake lipoprotein [Ralstonia solanacearum IPO1609] Length = 277 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 10/211 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L ++SKA +Y+ + +PF A+++ + +A+ Y G+ A + + Sbjct: 48 KLYSEAKDALDGGDYSKAVKYYEKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAVD 107 Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVER 168 +I +P +VDY YYL G+ ++ + +D+ D +A + ++ R Sbjct: 108 RFIQLHPNHPSVDYAYYLKGLINFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLITR 167 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A + N +A EV+ RYY +RG Y+AA R Q + +Y A EE Sbjct: 168 FPNSKYTPDAAQRMQYIVNAMAEHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVEE 227 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259 A+ ++++Y AL + D + +I++ YP Sbjct: 228 ALYIMMKSYEALGMKDLRDDTERIIKQNYPN 258 >gi|237746822|ref|ZP_04577302.1| competence lipoprotein ComL [Oxalobacter formigenes HOxBLS] gi|229378173|gb|EEO28264.1| competence lipoprotein ComL [Oxalobacter formigenes HOxBLS] Length = 265 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A ++ N+ KA EY+ + +PF A+++ + A+ Y + QA + E Sbjct: 37 KLYREAKDEMRSGNYEKAIEYYEKLESRYPFGVYAQQAQIDIAYAYYRDNEPAQALAAVE 96 Query: 119 EYITQYPESKNVDYVYYLVGM------------SYAQMIRDVPYDQRATKLMLQYMSRIV 166 +I +P N+DY+YYL G+ ++ Q + + D +A + +V Sbjct: 97 RFIKLHPNHPNIDYMYYLRGLINFNDRVGLLNFAFRQDLSER--DPKAAQDAFDSFKLLV 154 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 RY +S Y K A + + LA E+ + +YY +RG Y+AA R Q + NY ++ Sbjct: 155 TRYPDSVYSKDAIYRMKYLVTMLAKYEIHVAKYYYRRGAYLAAANRAQRAINNYPESAVV 214 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 EEA+ L E+Y L L D + + + ++ +P Sbjct: 215 EEALYILAESYKKLGLYDLSNDADRIFKQNFPDS 248 >gi|83745882|ref|ZP_00942939.1| transmembrane protein [Ralstonia solanacearum UW551] gi|83727572|gb|EAP74693.1| transmembrane protein [Ralstonia solanacearum UW551] Length = 289 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 10/211 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L ++SKA +Y+ + +PF A+++ + +A+ Y G+ A + + Sbjct: 60 KLYSEAKDALDGGDYSKAVKYYEKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAVD 119 Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVER 168 +I +P +VDY YYL G+ ++ + +D+ D +A + ++ R Sbjct: 120 RFIQLHPNHPSVDYAYYLKGLINFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLITR 179 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A + N +A EV+ RYY +RG Y+AA R Q + +Y A EE Sbjct: 180 FPNSKYTPDAAQRMQYIVNAMAEHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVEE 239 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259 A+ ++++Y AL + D + +I++ YP Sbjct: 240 ALYIMMKSYEALGMKDLRDDTERIIKQNYPN 270 >gi|73541037|ref|YP_295557.1| transmembrane protein [Ralstonia eutropha JMP134] gi|72118450|gb|AAZ60713.1| probable transmembrane protein [Ralstonia eutropha JMP134] Length = 271 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 57/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L ++S+A + + + +PF A+++ + +A+ Y G+ A + + Sbjct: 42 KLYSEAKDALDGGDYSRAVKLYEKLEGRYPFGRYAQQAQIDTAYASYKDGETAAALAAVD 101 Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVER 168 +I +P N+DY YYL G+ ++ + +D+ D +A + + +V R Sbjct: 102 RFIQLHPSHPNIDYAYYLKGLINFNDNLGWLGRFSGQDLSERDPKAARAAYDAFNTLVTR 161 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + +S Y A + N LA EV RYY KRG Y+AA+ R Q L +Y A EE Sbjct: 162 FPDSKYTPDAAARMQYIVNSLAQHEVHAARYYYKRGAYLAAVNRAQQALKDYDGAPANEE 221 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 A+ ++ +Y +L + D + +++ +P + +Y E Sbjct: 222 ALYIMIRSYDSLGMKDLRDDTARVMERNFPNSDYIKYGE 260 >gi|89901093|ref|YP_523564.1| hypothetical protein Rfer_2315 [Rhodoferax ferrireducens T118] gi|89345830|gb|ABD70033.1| putative transmembrane protein [Rhodoferax ferrireducens T118] Length = 268 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 10/212 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++Y +A L + KA F + +A+++ L A+ QY +G+ QA + Sbjct: 38 NKIYAEAKDELSSGGYDKAVVLFEKLEGRAAGTPLAQQAQLDKAYAQYKSGESAQALATL 97 Query: 118 EEYITQYPESKNVDYVYYL---------VGMSYAQMIRDVP-YDQRATKLMLQYMSRIVE 167 + ++ +P S +DY YL +G+ A +D+ DQ+A+K + +V Sbjct: 98 DRFMKLHPASPALDYALYLKGIINFNDDLGLFSAVTRQDLAERDQKASKESFESFKELVT 157 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 R+ S Y AR +T N LA EV + RYY RG YVAAI R Q+ + +Y E Sbjct: 158 RFPESRYTPDARQRMTYIVNSLAQYEVHVARYYYGRGAYVAAINRAQVAVTDYQGVPAVE 217 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 EA+ +V++Y AL L + ++++ YPQ Sbjct: 218 EALFIIVKSYDALGLTQLRDDAKRVLEKNYPQ 249 >gi|71065815|ref|YP_264542.1| lipoprotein [Psychrobacter arcticus 273-4] gi|71038800|gb|AAZ19108.1| possible lipoprotein (DUF0169) [Psychrobacter arcticus 273-4] Length = 359 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 9/218 (4%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 VT + ++ Y A+ + + +++A E +P A ++LL + QY +GKY Sbjct: 42 VTAEKSEQAYYNDAIAQIDKGRYTQAVEDLTNLRTFYPTGQYAEQALLDMMYAQYESGKY 101 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ---------MIRDVPYDQRATKLMLQY 161 + AA+ E++I YP + V Y YY+ G++ Q + D ++ Sbjct: 102 ETAAASAEQFIRLYPSNPQVSYAYYVRGVANMQGSSEGLKLFKLNQAERDTAYYRIAFAN 161 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 ++ +Y NSPY A +T NQ A E+ +Y++R YVAA+ R + V Y Sbjct: 162 FQELLNKYPNSPYASDAAQRMTFIYNQFAESEMSAANWYIEREAYVAAVNRAKWVFQYYP 221 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +E +A+ L ++ L L D A+E +L+Q YP Sbjct: 222 LSESVPDAITVLAYSHEKLGLTDLAKEYKTLLQINYPN 259 >gi|260912660|ref|ZP_05919146.1| DNA uptake lipoprotein [Pasteurella dagmatis ATCC 43325] gi|260633038|gb|EEX51203.1| DNA uptake lipoprotein [Pasteurella dagmatis ATCC 43325] Length = 291 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 10/210 (4%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 R + E+Y +L++ ++S++ Y FP + + ++LL F Y Y + Sbjct: 61 RPEEELYNAGQTYLQDGDYSQSIRYLEAVRNRFPGSSHSEQALLNLIFANYKTQDYTKTL 120 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQM----IRDVPYDQRAT------KLMLQYMSR 164 + ++ +YP+S ++DYV Y+ G++ + + I+D+ RAT K Sbjct: 121 VYADRFLQEYPQSSHLDYVLYMAGLTNSALGDNYIQDLFGVDRATRENSSIKAAFANFQT 180 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+ + NSPY K A + + LA E+ I ++Y KR ++A R +L Y D + Sbjct: 181 LVQHFPNSPYAKDALARMVYIKASLARHELSIAKFYAKRDAHIAVANRVVGMLQQYPDTQ 240 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQ 254 EA+ + +AY + L D A + +I+ Sbjct: 241 ATHEALPLMQQAYEKMNLTDLAAQTAKIIE 270 >gi|94310294|ref|YP_583504.1| hypothetical protein Rmet_1352 [Cupriavidus metallidurans CH34] gi|93354146|gb|ABF08235.1| DNA uptake lipoprotein [Cupriavidus metallidurans CH34] Length = 278 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 10/217 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L ++++A + + + +PF A+++ + +A+ Y G+ A + + Sbjct: 49 KLYSEAKDALDGGDYTRAVKLYEKLEGRYPFGRYAQQAQIDTAYANYKDGETAAALAAVD 108 Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVER 168 +I +P N+DY YYL G+ ++ + +D+ D +A + ++ R Sbjct: 109 RFIQLHPSHPNIDYAYYLKGLINFNDNLGWLGRFSGQDLSERDPKAARAAYDAFQILITR 168 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y +S Y A + N LA EV RYY +RG Y+AA+ R Q L +Y A EE Sbjct: 169 YPDSKYTPDATLRMQYIVNSLAQHEVHAARYYYRRGAYLAAVNRAQQALKDYDGAPANEE 228 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 A+ +V +Y AL + D + +++ YP + +Y Sbjct: 229 ALYIMVRSYDALGMKDLRDDAARVMERNYPNSDYIKY 265 >gi|114331226|ref|YP_747448.1| TPR repeat-containing protein [Nitrosomonas eutropha C91] gi|114308240|gb|ABI59483.1| TPR repeat [Nitrosomonas eutropha C91] Length = 257 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 14/207 (6%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 L E N+S A + F +P+ A+++ L A+ Y + A + + +I YP Sbjct: 33 LNEGNYSAAVKLFEALEARYPYGRFAQQAQLEIAYAYYKDQEQASAIAAADRFIQLYPHH 92 Query: 128 KNVDYVYYLVGMS------------YAQMIRD--VPYDQRATKLMLQYMSRIVERYTNSP 173 N+DY YY+ G++ ++I+ D +A++ + +V RY +S Sbjct: 93 HNIDYAYYIKGLASFNDDQGLLGYITTKIIKQDLSERDAKASRESFEDFKLLVTRYPDSK 152 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y A + N LA E+ + RYY+KR Y+AA+ R Q VL Y EEA+ + Sbjct: 153 YTPDALQRMAYLVNALARGEIHVARYYMKRKAYIAALRRAQFVLEEYPQTPATEEALYIM 212 Query: 234 VEAYVALALMDEAREVVSLIQERYPQG 260 AY L L+D + +I++ +P+ Sbjct: 213 ASAYNELGLIDLREDTEKVIKKNFPES 239 >gi|329902612|ref|ZP_08273173.1| putative component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Oxalobacteraceae bacterium IMCC9480] gi|327548720|gb|EGF33363.1| putative component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Oxalobacteraceae bacterium IMCC9480] Length = 265 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 19/252 (7%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 AL + F+I+ C L+ + +++ ++Y +A + N+ +Y+ + Sbjct: 10 ALALVFTISACGLLPEKIDETKNWS---------AAKLYAEARDEISTGNYETGIKYYER 60 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM--- 139 +PF A+++ + A+ Y QA + E +I +P NVDY+YYL G+ Sbjct: 61 LESRYPFGTFAQQAQMEVAYAYYRQSDQAQALAAVERFIKLHPNHPNVDYMYYLRGLINF 120 Query: 140 -------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 + D +A + ++VER+ +S Y AR + N +A Sbjct: 121 NDKLGLFDFVSRQDATERDPKAAHEAFESFKQLVERFPDSIYAADARLRMKYLVNAIAQH 180 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 EV + YY +RG YVAA+ R Q + Y A EEA+ + +Y L + + + + Sbjct: 181 EVHVANYYFRRGAYVAAVNRAQFAVKEYPTAPATEEALFVMTRSYDELGMPELRDDAGRV 240 Query: 253 IQERYPQGYWAR 264 +++ +P + R Sbjct: 241 MKQNFPNSVYYR 252 >gi|241663188|ref|YP_002981548.1| outer membrane assembly lipoprotein YfiO [Ralstonia pickettii 12D] gi|240865215|gb|ACS62876.1| outer membrane assembly lipoprotein YfiO [Ralstonia pickettii 12D] Length = 285 Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 107/211 (50%), Gaps = 10/211 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L +++KA +Y+ + +PF A+++ + +A+ Y G+ A + + Sbjct: 56 KLYSEAKDSLDGGDYAKAVKYYEKLESRYPFGPYAQQAQIETAYANYKDGETAAALAAVD 115 Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVER 168 +I +P +VDY YYL G+ ++ + +D+ D +A + ++ R Sbjct: 116 RFIQLHPNHPSVDYAYYLKGLINFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLITR 175 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A + N +A EV RYY +RG Y+AA+ R Q + +Y A EE Sbjct: 176 FPNSKYTPDATQRMQYIVNAMAEHEVGAARYYYRRGAYLAAVNRAQDAIKDYDRAPAVEE 235 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259 A+ ++++Y AL + D + +I++ YP+ Sbjct: 236 ALYIMMKSYEALGMKDMRDDTERIIKQNYPK 266 >gi|52841419|ref|YP_095218.1| competence lipoprotein ComL [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628530|gb|AAU27271.1| competence lipoprotein ComL [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 260 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 114/249 (45%), Gaps = 26/249 (10%) Query: 30 IAVCFLVG----------WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 I V FL+G W + + +T +++Y A LK++ ++ A + Sbjct: 7 IHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMT----AKQLYTAAQTSLKKEEYATAAKQ 62 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 +PF+ S + + Y Y AA+ E +I YP +KNVDY YY+ G+ Sbjct: 63 LEAMESMYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGL 122 Query: 140 SYAQMIRDV-----PYDQR------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + Q R V P D+ T+ ++ + + +++++ +S Y A + RN Sbjct: 123 ANFQQTRGVFAKMLPMDESWRDPGTQTQALVDFAT-LIQKFPDSKYKANALQRMIYLRNM 181 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 A E+ + YY KR YVAAI R ++ NY A A++A+ + EA AL L A + Sbjct: 182 FAQHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAED 241 Query: 249 VVSLIQERY 257 +++ + Y Sbjct: 242 AMAVYKATY 250 >gi|77164235|ref|YP_342760.1| transmembrane protein [Nitrosococcus oceani ATCC 19707] gi|254435638|ref|ZP_05049145.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus oceani AFC27] gi|76882549|gb|ABA57230.1| probable transmembrane protein [Nitrosococcus oceani ATCC 19707] gi|207088749|gb|EDZ66021.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus oceani AFC27] Length = 261 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 10/208 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A L ++ KA ++ Q +PF A+++LL SA+ Y + + A + + + Sbjct: 39 YAEAKTALDAGDYQKAISFYEQLEARYPFGAYAQQALLESAYAYYKFNEPESALAALDRF 98 Query: 121 ITQYPESKNVDYVYYL---------VGMSYAQMIRD-VPYDQRATKLMLQYMSRIVERYT 170 I YP + ++DY +YL VG+ + RD D + + L+ +++R+ Sbjct: 99 IRLYPLNSHMDYAHYLKGLVSFHRGVGLVEKYIPRDETQRDPESARNALKSFKTLIQRFP 158 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 +S Y + + + RN+LA E+ + YY++RG Y+ AI R + V+ NY EA+ Sbjct: 159 DSKYAEDSAQRIVYLRNRLAQHEINVAHYYMRRGAYIGAINRAKYVVENYQRTPPVPEAL 218 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYP 258 + Y L L + + + +++ +P Sbjct: 219 TIMARGYEILGLNELKEDTLRVLEASFP 246 >gi|148358772|ref|YP_001249979.1| competence lipoprotein ComL [Legionella pneumophila str. Corby] gi|296106817|ref|YP_003618517.1| DNA uptake lipoprotein [Legionella pneumophila 2300/99 Alcoy] gi|148280545|gb|ABQ54633.1| competence lipoprotein ComL [Legionella pneumophila str. Corby] gi|295648718|gb|ADG24565.1| DNA uptake lipoprotein [Legionella pneumophila 2300/99 Alcoy] Length = 257 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 114/249 (45%), Gaps = 26/249 (10%) Query: 30 IAVCFLVG----------WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 I V FL+G W + + +T +++Y A LK++ ++ A + Sbjct: 4 IHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMT----AKQLYTAAQTSLKKEEYATAAKQ 59 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 +PF+ S + + Y Y AA+ E +I YP +KNVDY YY+ G+ Sbjct: 60 LEAMESMYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGL 119 Query: 140 SYAQMIRDV-----PYDQR------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + Q R V P D+ T+ ++ + + +++++ +S Y A + RN Sbjct: 120 ANFQQTRGVFAKMLPMDESWRDPGTQTQALVDFAT-LIQKFPDSKYKANALQRMIYLRNM 178 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 A E+ + YY KR YVAAI R ++ NY A A++A+ + EA AL L A + Sbjct: 179 FAQHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAED 238 Query: 249 VVSLIQERY 257 +++ + Y Sbjct: 239 AMAVYKATY 247 >gi|187929000|ref|YP_001899487.1| outer membrane assembly lipoprotein YfiO [Ralstonia pickettii 12J] gi|187725890|gb|ACD27055.1| outer membrane assembly lipoprotein YfiO [Ralstonia pickettii 12J] Length = 258 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 56/212 (26%), Positives = 107/212 (50%), Gaps = 10/212 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++Y +A L +++KA +Y+ + +PF A+++ + +A+ Y G+ A + Sbjct: 28 NKLYSEAKDSLDGGDYAKAVKYYEKLESRYPFGQYAQQAQIETAYANYKDGETAAALAAV 87 Query: 118 EEYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVE 167 + +I +P +VDY YYL G+ ++ + +D+ D +A + ++ Sbjct: 88 DRFIQLHPNHPSVDYAYYLKGLINFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLIT 147 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 R+ NS Y A + N +A EV RYY +RG Y+AA+ R Q + +Y A E Sbjct: 148 RFPNSKYTPDATQRMQYIVNAMAEHEVGAARYYYRRGAYLAAVNRAQDAIKDYDRAPAVE 207 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 EA+ ++++Y AL + D + +I++ YP+ Sbjct: 208 EALYIMMKSYEALGMKDMRDDTERIIKQNYPK 239 >gi|54294130|ref|YP_126545.1| hypothetical protein lpl1194 [Legionella pneumophila str. Lens] gi|54297143|ref|YP_123512.1| hypothetical protein lpp1188 [Legionella pneumophila str. Paris] gi|53750928|emb|CAH12339.1| hypothetical protein lpp1188 [Legionella pneumophila str. Paris] gi|53753962|emb|CAH15433.1| hypothetical protein lpl1194 [Legionella pneumophila str. Lens] gi|307609941|emb|CBW99469.1| hypothetical protein LPW_12421 [Legionella pneumophila 130b] Length = 257 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 114/249 (45%), Gaps = 26/249 (10%) Query: 30 IAVCFLVG----------WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 I V FL+G W + + +T +++Y A LK++ ++ A + Sbjct: 4 IHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMT----AKQLYTAAQTSLKKEEYATAAKQ 59 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 +PF+ S + + Y Y AA+ E +I YP +KNVDY YY+ G+ Sbjct: 60 LEAMESMYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGL 119 Query: 140 SYAQMIRDV-----PYDQR------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + Q R V P D+ T+ ++ + + +++++ +S Y A + RN Sbjct: 120 ANFQQTRGVFAKMLPMDESWRDPGTQTQALVDFAT-LIQKFPDSKYKANALQRMIYLRNM 178 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 A E+ + YY KR YVAAI R ++ NY A A++A+ + EA AL L A + Sbjct: 179 FAQHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAED 238 Query: 249 VVSLIQERY 257 +++ + Y Sbjct: 239 AMAVYKATY 247 >gi|261856620|ref|YP_003263903.1| outer membrane assembly lipoprotein YfiO [Halothiobacillus neapolitanus c2] gi|261837089|gb|ACX96856.1| outer membrane assembly lipoprotein YfiO [Halothiobacillus neapolitanus c2] Length = 273 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 14/208 (6%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y++A ++ ++ A + F +PF ++ L A+ Y + A + + Sbjct: 55 QLYDEASSAMRRDDYGTAIKKFETLEGRYPFGAYTEQAQLEVAYAYYKYNEPDSAIAAAD 114 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY------------MSRIV 166 YI +P+ KNVDY Y+ G+S M R + K L Y S +V Sbjct: 115 RYIQIHPQGKNVDYALYIKGLS--NMDRGDSLINKIAKPNLAYRDQSILHNAYAAFSELV 172 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 R+ +S YV A + RN LA E+ + RYY+KRG ++AA R Q L+ Y+ + Sbjct: 173 TRFPDSKYVDDASVRLIKIRNDLAEHEIYVARYYMKRGAWLAAANRAQTALSKYNGSTST 232 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQ 254 A+ L+ AY L L EA + +++ Sbjct: 233 IPALEILISAYKKLGLKTEAADAEQILK 260 >gi|292490723|ref|YP_003526162.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus halophilus Nc4] gi|291579318|gb|ADE13775.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus halophilus Nc4] Length = 260 Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 10/208 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A L N+ +A + Q +PF A+++LL SA+ Y + + A + + + Sbjct: 38 YSEAKAALNSGNYQQAITLYEQLEARYPFGVYAQQALLESAYAYYKFDEPESALAALDRF 97 Query: 121 ITQYPESKNVDYVYYLVGM-----SYAQMIRDVPYDQ-----RATKLMLQYMSRIVERYT 170 I YP + ++DY +YL G+ + + +P D+ + + L+ +V+R+ Sbjct: 98 IRLYPLNPHMDYAHYLKGLVNFHRGIGLIEKYIPRDESQRDPESARDALKDFRTLVKRFP 157 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 +S Y K + RN+LA E+ + +YY++RG Y+ AI R + V+ NY EA+ Sbjct: 158 DSRYAKDGAQRIVYLRNRLAQHEINVAQYYMRRGAYIGAINRAKYVVENYQRTPTVPEAL 217 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYP 258 + Y L L + A + + +++ +P Sbjct: 218 TIMARGYKVLGLDELAEDTLRVLETNFP 245 >gi|194289463|ref|YP_002005370.1| lipoprotein, coml family, tetratricopeptide repeats (tpr) domain [Cupriavidus taiwanensis LMG 19424] gi|193223298|emb|CAQ69303.1| putative lipoprotein, ComL family, tetratricopeptide repeats (TPR) domain [Cupriavidus taiwanensis LMG 19424] Length = 276 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 107/217 (49%), Gaps = 10/217 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L ++++A + + + +PF A+++ + +A+ Y G+ A + + Sbjct: 47 KLYSEAKDALDGGDYTRAVKLYEKLEGRYPFGRYAQQAQIDTAYANYKDGETAAALAAVD 106 Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVER 168 +I +P N+DY YYL G+ ++ + +D+ D +A + ++ R Sbjct: 107 RFIQLHPNHPNIDYAYYLKGLINFNDNLGWLGRFSGQDLSERDPKAARAAYDAFHTLITR 166 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y S Y A + N LA EV RYY +RG Y+AA+ R Q L +Y A EE Sbjct: 167 YPESKYTPDATLRMQYIVNSLAQHEVHAARYYFRRGAYLAAVNRAQQSLKDYDGAPANEE 226 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 A+ ++ +Y A+ + D + ++++ +P+ + +Y Sbjct: 227 ALYIMIRSYDAMGMKDLRDDTARVMEKNFPESDFIKY 263 >gi|160872537|ref|ZP_02062669.1| competence lipoprotein ComL [Rickettsiella grylli] gi|159121336|gb|EDP46674.1| competence lipoprotein ComL [Rickettsiella grylli] Length = 250 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 14/214 (6%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +VY+ A L + FS+A + + + +PF + K+ L + Y G A + + Sbjct: 38 QVYQNARASLLDGEFSQAIKSYEALAVLYPFNRYSEKAQLGLIYAYYKDGDSPSAKTAAQ 97 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRD-------VPYD-----QRATKLMLQYMSRIV 166 +I YP S+ +DY YY+ M A M +D VP D +L Q + ++ Sbjct: 98 RFIYLYPHSQYIDYAYYMRAM--ADMDQDRGWYLRYVPIDLALRDPGTMRLAYQEFAELI 155 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 RY +SPYV AR + RN A E+ I YY +R Y+AA R ++ Y A Sbjct: 156 RRYPDSPYVPDARQRMIYLRNLFARYELHIADYYFRRKAYIAAANRANEIIQQYQGAPEV 215 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + A+ +++AY L L AR+ +++ + YP Sbjct: 216 KHALMIMIKAYRILGLETLARQSLAIYRLNYPDS 249 >gi|17546346|ref|NP_519748.1| hypothetical protein RSc1627 [Ralstonia solanacearum GMI1000] gi|17428643|emb|CAD15329.1| probable dna uptake lipoprotein transmembrane [Ralstonia solanacearum GMI1000] Length = 289 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 105/211 (49%), Gaps = 10/211 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L ++SKA +Y+ + +PF A+++ + +A+ Y G+ A + + Sbjct: 60 KLYSEAKDALDGGDYSKAVKYYEKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAVD 119 Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVER 168 +I +P +VDY YYL G+ ++ + +D+ D +A + ++ R Sbjct: 120 RFIQLHPNHPSVDYAYYLKGLINFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLITR 179 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A + N +A EV+ RYY +RG Y+AA R Q + +Y A EE Sbjct: 180 FPNSKYAPDAAQRMQYIVNAMAEHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVEE 239 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + ++++Y AL + D + +I++ YP Sbjct: 240 GLYIMMKSYEALGMKDLRDDTERIIKQNYPN 270 >gi|319763345|ref|YP_004127282.1| outer membrane assembly lipoprotein yfio [Alicycliphilus denitrificans BC] gi|330825579|ref|YP_004388882.1| outer membrane assembly lipoprotein YfiO [Alicycliphilus denitrificans K601] gi|317117906|gb|ADV00395.1| outer membrane assembly lipoprotein YfiO [Alicycliphilus denitrificans BC] gi|329310951|gb|AEB85366.1| outer membrane assembly lipoprotein YfiO [Alicycliphilus denitrificans K601] Length = 265 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 10/178 (5%) Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM----------SY 141 +A+++ L A+ QY G+ QA + + ++ +P S +DY YL G+ S+ Sbjct: 69 LAQQAQLEKAYAQYKGGEKAQAIATLDRFMKLHPASPALDYALYLKGLVNFNENLGLFSW 128 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 DQ+A K + +V R+ S Y AR +T N LA EV + RYY Sbjct: 129 LSRQDLSERDQKAAKDSFESFRELVTRFPESRYTPDARLRMTYIVNSLAQYEVHVARYYY 188 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +RG YVAAI R Q + +Y D EEA+ LV +Y AL + + ++Q YP Sbjct: 189 QRGAYVAAISRAQSAITDYKDVPATEEALYILVRSYDALGMTQLRDDAQRVLQASYPN 246 >gi|294634725|ref|ZP_06713256.1| competence lipoprotein ComL [Edwardsiella tarda ATCC 23685] gi|291091855|gb|EFE24416.1| competence lipoprotein ComL [Edwardsiella tarda ATCC 23685] Length = 245 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ NF A +PF +++ L + Y + A + + Sbjct: 34 EIYATAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPMAQATID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P S+N+ YV Y+ G++ M I D + + S++V+R Sbjct: 94 RFIRLNPTSQNMPYVLYMRGLTDMAMDDSALQGFFGIDRSDRDPEHARQAFRDFSQLVQR 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +N+LA E+ + R+Y KRG YVA + R + +L NY D + + Sbjct: 154 YPNSQYSSDATKRLIFLKNRLAKHELAVARFYTKRGAYVAVVNRVEQMLRNYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY L LM EA +V +I Sbjct: 214 ALPLMENAYRQLGLMSEAAKVQKII 238 >gi|300114964|ref|YP_003761539.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus watsonii C-113] gi|299540901|gb|ADJ29218.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus watsonii C-113] Length = 262 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/208 (25%), Positives = 106/208 (50%), Gaps = 10/208 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A L ++ KA ++ Q +PF A+++LL SA+ Y + + A + + + Sbjct: 40 YAEAKAALNAGDYQKAITFYEQLEARYPFGVYAQQALLESAYAYYKFNEPESALAALDRF 99 Query: 121 ITQYPESKNVDYVYYLVGM-SYAQMI----RDVPYDQ-----RATKLMLQYMSRIVERYT 170 I YP + ++DY +YL G+ S+ + + R +P D+ + + L+ +++R+ Sbjct: 100 IRLYPLNSHMDYAHYLKGLVSFHRGVGIVERYIPRDETQRDPESARNALKSFKTLIQRFP 159 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 +S Y + + + RN+LA E+ + YY++RG Y+ AI R + V+ NY EA+ Sbjct: 160 DSKYAEDSAQRIVYLRNRLAQHEINVAHYYMRRGAYIGAINRAKYVVENYQRTPPVPEAL 219 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYP 258 + Y L L + + + +++ +P Sbjct: 220 TIMARGYEILGLNELKEDTLRILELSFP 247 >gi|114321698|ref|YP_743381.1| putative lipoprotein [Alkalilimnicola ehrlichii MLHE-1] gi|114228092|gb|ABI57891.1| putative lipoprotein [Alkalilimnicola ehrlichii MLHE-1] Length = 254 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 12/211 (5%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y++A L+ N++ A E + FPF A ++ L + Y AG+ + + + Sbjct: 38 ELYQQARRQLENGNYTMAVETLERLQGRFPFGPFATQAQLDIIYAYYQAGELESTIAAAD 97 Query: 119 EYITQYPESKNVDYVYYLVGMSYA-----------QMIRDVPYDQRATKLMLQYMSRIVE 167 ++ YP NV Y Y+ G++ A + R + Q + + + +++ Sbjct: 98 RFMRLYPRDPNVAYARYMRGLANAGVGDEFFTRVFNLDRSLRDPQPLRRAFVDFRE-LIQ 156 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 R+ +S YV AR + R+ LA E+ + R+YL+R VAA+ R + VL Y E Sbjct: 157 RHPDSEYVDDARERMQEIRDLLARHEIYVARFYLRRDAPVAAVGRARTVLQEYQGTGAVE 216 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYP 258 +A+ LVEAY L L D ++V +I E +P Sbjct: 217 DALEVLVEAYGMLELADLQQDVRRVIGENFP 247 >gi|113867447|ref|YP_725936.1| DNA uptake lipoprotein [Ralstonia eutropha H16] gi|113526223|emb|CAJ92568.1| DNA uptake lipoprotein [Ralstonia eutropha H16] Length = 276 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 10/217 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L ++++A + + + +PF A+++ + +A+ Y G+ A + + Sbjct: 47 KLYSEAKDALDGGDYTRAVKLYEKLEGRYPFGRYAQQAQIDTAYANYKDGETAAALAAVD 106 Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVER 168 +I +P N+DY YYL G+ ++ + +D+ D +A + + ++ R Sbjct: 107 RFIQLHPNHPNIDYAYYLKGLINFNDNLGWLGRFSGQDLSERDPKAARAAYDAFNTLITR 166 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y S Y A + N LA EV RYY +RG Y+AA+ R Q L +Y A EE Sbjct: 167 YPESKYTPDATLRMQYIVNSLAQHEVHAARYYYRRGAYLAAVNRAQQALKDYDGAPANEE 226 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 A+ +V +Y A+ + D + +++ +P + +Y Sbjct: 227 ALYIMVRSYDAMGMKDLRDDTARVMERNFPDSDFIKY 263 >gi|332290083|ref|YP_004420935.1| outer membrane protein assembly complex subunit YfiO [Gallibacterium anatis UMN179] gi|330432979|gb|AEC18038.1| outer membrane protein assembly complex subunit YfiO [Gallibacterium anatis UMN179] Length = 267 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 15/216 (6%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y+KA +L+++N+ +A Y FP+ A+++ L + Y Y S E Sbjct: 37 ELYQKAQEYLQDENYRQAIRYLEATDNRFPYGEYAQQADLNLIYAYYRNEDYVNTLSTAE 96 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD-------QRATKL---MLQYMSRIVER 168 Y+ +YP+ ++DYV Y+ G++ + ++ D R TK +V Sbjct: 97 RYLQKYPQGPHLDYVLYIAGLTNMALGDNLFQDFFGVERSSRETKPREDAYHNFETLVRY 156 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ-LVLANYSDAEHAE 227 + NS Y A+ ++ R LA + EI +YLKR YVA + R Q +L Y D +A Sbjct: 157 FPNSEYTPDAKQRMSYIRESLAKHQYEIAEFYLKRDAYVAVVNRIQDNLLRLYPDTSYAY 216 Query: 228 EAMARLVEAYVALALMDEAREVVSLI----QERYPQ 259 +A+ L +AY AL L +A+E+ ++ Q+ +P+ Sbjct: 217 KALPMLQQAYAALHLDKQAQEIAQVLANSKQKEFPE 252 >gi|167855785|ref|ZP_02478538.1| putative lipoprotein [Haemophilus parasuis 29755] gi|219871127|ref|YP_002475502.1| DNA uptake lipoprotein, TPR repeat-containing protein [Haemophilus parasuis SH0165] gi|167853064|gb|EDS24325.1| putative lipoprotein [Haemophilus parasuis 29755] gi|219691331|gb|ACL32554.1| DNA uptake lipoprotein, TPR repeat-containing protein [Haemophilus parasuis SH0165] Length = 259 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/240 (25%), Positives = 116/240 (48%), Gaps = 11/240 (4%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 F+S+A L G D + Q E+Y+K +L++ +++ A Y + Sbjct: 4 FYSLASLVLAGLLVVGCSGSKKDEFEGIPSQ-ELYDKGQAYLQDGDYNNAIRYLDAVDLR 62 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-- 144 + L + Y G+Y +A + E + +P S ++DYVYYL G++YA++ Sbjct: 63 SNQGAYDEQVQLSLIYANYKLGEYYKALEVAERFARTHPNSSSMDYVYYLAGLNYARLGD 122 Query: 145 --IRDVPYDQRATKLMLQYMS------RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 I+D RA++ + + I +Y NS Y A+ ++ +N+LA E++I Sbjct: 123 NWIQDFFGINRASRAIENIRNAYGNFQTITFQYPNSQYTSDAQNWMIYLKNRLAEHELKI 182 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +Y++R YVA + R +L Y D + +A+ L ++ A+ + D A+++ +I+E Sbjct: 183 AEFYMERKAYVAVVNRVDEMLRLYPDTQATYQALPLLKTSFEAMGIKDSAQKISEMIKEN 242 >gi|86159785|ref|YP_466570.1| hypothetical protein Adeh_3366 [Anaeromyxobacter dehalogenans 2CP-C] gi|85776296|gb|ABC83133.1| tetratricopeptide repeat protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 262 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 104/211 (49%), Gaps = 14/211 (6%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E Y+ + LK NF++A ++F +PF+ A S L A V++ +Y +AA + Sbjct: 39 ENYQAGMDELKADNFTEAVKFFEFVKTKYPFSKFAALSELRLADVKFKQDRYLEAAEAYK 98 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVP-----------YDQRATKLMLQYMSRIVE 167 +++ +P ++VDY Y G+SY +D P DQR + +Q ++ V+ Sbjct: 99 QFVQLHPTHEDVDYAEYRSGLSY---FKDAPGEFALFPPAAEKDQRQAEKAVQVLTDFVQ 155 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 T S Y+ A+ + + +LAA+E + YY KR + A R++ ++ Y + H Sbjct: 156 TRTQSKYLPDAKKVLGEAQTRLAAREWYVAEYYFKRSLWAGAAGRYETLVDRYPGSRHEP 215 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYP 258 EA+ +L A + + AR+ + + ++P Sbjct: 216 EALWKLASACLKMDEKHRARKALQQLIVKHP 246 >gi|206890303|ref|YP_002248672.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742241|gb|ACI21298.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 248 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 45/148 (30%), Positives = 80/148 (54%) Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I YPES Y Y +GM+Y + I + L ++ + Y PY Sbjct: 96 FIELYPESTYAPYAQYSIGMAYFRQIEGPERGAGTAQKALNEFLKLEKMYPRHPYGDILP 155 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + RN +A E+ IG++Y K+G Y AAI RF+ ++ NY D ++ +E + LV++Y Sbjct: 156 LRIQKCRNIIAEGELIIGKFYHKKGSYTAAIGRFEGIVKNYPDFKNLDETLYLLVDSYKN 215 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVE 267 L ++D+A++ + L++E++P +A+ E Sbjct: 216 LNMLDKAKQYLKLLKEKFPDSQFAKKAE 243 >gi|297170256|gb|ADI21293.1| DNA uptake lipoprotein [uncultured gamma proteobacterium HF0010_09F21] Length = 240 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 10/195 (5%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 + +N++ A E + R +PF A ++ +V Y G + + + E++I YP + Sbjct: 42 ISSRNYTGAAEALFRIERSYPFGVYAEQARADLIYVHYMTGNFDASYAAAEKFIRLYPRN 101 Query: 128 KNVDYVYYLVGMS--YAQ--------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 N+DY Y++ GM+ YA + D K ++ + RY S YV Sbjct: 102 TNIDYAYFMKGMTGYYADDGLFSDFLTLNLAKRDVTGAKKSFADLTEFLIRYPESDYVDE 161 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 AR + RN +A+ E++ YYLKRG YVAA+ R ++ N + + A+ + EAY Sbjct: 162 ARSRLVFLRNLIASNELDSAEYYLKRGAYVAALNRATYIIKNMPNTSEKKRALKIMKEAY 221 Query: 238 VALALMDEAREVVSL 252 L D A +V +L Sbjct: 222 TKLGYKDYADKVKAL 236 >gi|146306003|ref|YP_001186468.1| DNA uptake lipoprotein-like protein [Pseudomonas mendocina ymp] gi|145574204|gb|ABP83736.1| DNA uptake lipoprotein-like protein [Pseudomonas mendocina ymp] Length = 330 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 102/210 (48%), Gaps = 10/210 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y +A L +++++A +PF A ++ L + Y + + A S E Sbjct: 33 ELYRQAQADLDNRSYTQAIAKLKALESRYPFGRYAEQAQLELIYAYYKNVEPEAAKSSAE 92 Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR-----ATKLMLQYMSRIVER 168 +I +P+ NVDY YYL G+ S+ Q + R +P D A + +++ R Sbjct: 93 RFIRLHPQHANVDYAYYLKGLASFDQDRGLLARFLPLDMTKRDPGAARDSYNEFAQLTSR 152 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y S Y A+ + RN LAA EV +G YYLKR YVAA R + V+ N+ + + Sbjct: 153 YPTSRYAPDAKQRMIYLRNLLAAYEVHVGHYYLKRQAYVAAANRGRYVVENFQETPAVGD 212 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258 +A + EAY LAL D A + ++ YP Sbjct: 213 GLAIMTEAYQRLALNDLAATSLETLKLNYP 242 >gi|220918604|ref|YP_002493908.1| outer membrane assembly lipoprotein YfiO [Anaeromyxobacter dehalogenans 2CP-1] gi|219956458|gb|ACL66842.1| outer membrane assembly lipoprotein YfiO [Anaeromyxobacter dehalogenans 2CP-1] Length = 262 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 104/211 (49%), Gaps = 14/211 (6%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E Y+ + LK NF++A ++F +PF+ A S L A V++ +Y +AA + Sbjct: 39 ENYQAGMDELKADNFTEAVKFFEFVKTKYPFSKFAALSELRLADVKFKQDRYLEAAEAYK 98 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVP-----------YDQRATKLMLQYMSRIVE 167 +++ +P ++VDY Y G++Y +D P DQR + +Q ++ V+ Sbjct: 99 QFVQLHPTHEDVDYAEYRSGLAY---FKDAPGDFALFPPASEKDQRQAEKAVQVLTDFVQ 155 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 T S Y+ A+ + + +LAA+E + YY KR + A R++ ++ Y + H Sbjct: 156 TRTQSKYLADAKKVLAEAQTRLAAREWYVAEYYYKRSRWAGAAGRYETLVDKYPGSTHEP 215 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYP 258 EA+ +L A + + AR+ + + ++P Sbjct: 216 EALWKLASACLKMDEKHRARKALQTLIVKHP 246 >gi|149926151|ref|ZP_01914413.1| probable transmembrane protein [Limnobacter sp. MED105] gi|149824969|gb|EDM84181.1| probable transmembrane protein [Limnobacter sp. MED105] Length = 282 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 15/216 (6%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +YE+A + N+ + E + +P+ A+++ + +AF Y AG QA + + Sbjct: 49 LYEEAKAEIDVGNYERGIELLEKLEARYPYGRFAQQAQIDTAFAYYKAGDNAQALAATDR 108 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERY 169 +I YP +N+DYVYYL G+ + + D + T+ +V R+ Sbjct: 109 FIKLYPNHQNLDYVYYLRGLISFNEDKGIFSLLSGEDQSARDPKGTRAAFDAFKEVVSRF 168 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 +S Y + ++ + N LA E+ + RYY KRG Y+AA+ R Q V+ + EEA Sbjct: 169 PDSKYYEDSKSRLQYLVNALAQNELHVARYYYKRGAYLAAVNRAQEVVRRFEQTPSIEEA 228 Query: 230 MARLVEAYVAL---ALMDEAREVVSLIQERYPQGYW 262 + + +Y L AL + + V++L + P YW Sbjct: 229 LFISLRSYEKLNMTALAADTKRVINLNFKDSP--YW 262 >gi|261494333|ref|ZP_05990827.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309982|gb|EEY11191.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica serotype A2 str. OVINE] Length = 259 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 123/247 (49%), Gaps = 18/247 (7%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 KF +A F+ G S++++ +V D+ Y K +L++ +++ A Y Sbjct: 3 KFKSLATLVLAGLFVAGCSN-SNKELEQSNVQDL------YGKGQTYLQDGDYNSAIRYL 55 Query: 81 NQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 ++ ++G+ ++ L + QY G+Y +A E + YP + N+DYV+YL G+ Sbjct: 56 EAVGTKGGQYSGLGEQTQLSLIYAQYKVGEYYKALDAAERFARSYPNAANMDYVFYLAGL 115 Query: 140 SYAQM----IRDVPYDQRATKLMLQYMS------RIVERYTNSPYVKGARFYVTVGRNQL 189 S A++ I+D RA++ + + IV+RY S Y + A+ ++ N+L Sbjct: 116 SNARLSDNFIQDFFGVNRASRAVDNVRNAYGNFQTIVQRYPQSQYAQDAQNWMNYLFNRL 175 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A E+ + ++Y +R YVA + R + +L Y + ++A+ L EAY + + D ++ Sbjct: 176 AEHELAVVKFYDERNAYVAVVNRIEEMLRFYPNTLATKQALPYLKEAYKQMNIPDAEQKT 235 Query: 250 VSLIQER 256 LIQE Sbjct: 236 ELLIQEN 242 >gi|254361950|ref|ZP_04978081.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica PHL213] gi|153093497|gb|EDN74477.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica PHL213] Length = 259 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/246 (26%), Positives = 123/246 (50%), Gaps = 18/246 (7%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 KF +A F+ G S++++ +V D+ Y K +L++ +++ A Y Sbjct: 3 KFKSLATLVLAGLFVAGCSN-SNKELEQSNVQDL------YGKGQTYLQDGDYNSAIRYL 55 Query: 81 NQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 ++ ++G+ ++ L + QY G+Y +A E + YP + N+DYV+YL G+ Sbjct: 56 EAVGTKGGQYSGLGEQTQLSLIYAQYKVGEYYKALDAAERFARSYPNAANMDYVFYLAGL 115 Query: 140 SYAQM----IRDVPYDQRATKLMLQYMS------RIVERYTNSPYVKGARFYVTVGRNQL 189 S A++ I+D RA++ + + IV+RY S Y + A+ ++ N+L Sbjct: 116 SNARLSDNFIQDFFGVNRASRAVDNVRNAYGNFQTIVQRYPQSQYAQDAQNWMNYLFNRL 175 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A E+ + ++Y +R YVA + R + +L Y + ++A+ L EAY + + D ++ Sbjct: 176 AEHELAVVKFYDERNAYVAVVNRIEEMLRFYPNTLATKQALPYLKEAYKQMNIPDAEQKT 235 Query: 250 VSLIQE 255 LIQE Sbjct: 236 ELLIQE 241 >gi|197123839|ref|YP_002135790.1| outer membrane assembly lipoprotein YfiO [Anaeromyxobacter sp. K] gi|196173688|gb|ACG74661.1| outer membrane assembly lipoprotein YfiO [Anaeromyxobacter sp. K] Length = 262 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 104/211 (49%), Gaps = 14/211 (6%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E Y+ + LK NF++A ++F +PF+ A S L A V++ +Y +AA + Sbjct: 39 ENYQAGMDELKADNFTEAVKFFEFVKTKYPFSKFAALSELRLADVKFKQDRYLEAAEAYK 98 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVP-----------YDQRATKLMLQYMSRIVE 167 +++ +P ++VDY Y G++Y +D P DQR + +Q ++ V+ Sbjct: 99 QFVQLHPTHEDVDYAEYRSGLAY---FKDAPGDFALFPPASEKDQRQAEKAVQVLTDFVQ 155 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 T S Y+ A+ + + +LAA+E + YY KR + A R++ ++ Y + H Sbjct: 156 TRTQSKYLADAKKVLAEAQTRLAAREWYVAEYYYKRSRWAGAAGRYETLVDKYPGSAHEP 215 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYP 258 EA+ +L A + + AR+ + + ++P Sbjct: 216 EALWKLASACLKMDEKHRARKALQTLIVKHP 246 >gi|309782613|ref|ZP_07677335.1| competence lipoprotein ComL [Ralstonia sp. 5_7_47FAA] gi|308918588|gb|EFP64263.1| competence lipoprotein ComL [Ralstonia sp. 5_7_47FAA] Length = 258 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/212 (26%), Positives = 106/212 (50%), Gaps = 10/212 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++Y +A L +++KA +Y+ + +PF A+++ + +A+ Y G+ A + Sbjct: 28 NKLYSEAKDSLDGGDYAKAVKYYEKLESRYPFGQYAQQAQIETAYANYKDGETAAALAAV 87 Query: 118 EEYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVE 167 + +I +P +VDY YYL G+ ++ + +D+ D +A + + Sbjct: 88 DRFIQLHPNHPSVDYAYYLNGLINFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLFT 147 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 R+ NS Y A + N +A EV RYY +RG Y+AA+ R Q + +Y A E Sbjct: 148 RFPNSKYTPDATQRMQYIVNAMAEHEVGAARYYYRRGAYLAAVNRAQDAIKDYDRAPAVE 207 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 EA+ ++++Y AL + D + +I++ YP+ Sbjct: 208 EALYIMMKSYEALGMKDMRDDTERIIKQNYPK 239 >gi|261493666|ref|ZP_05990185.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261310666|gb|EEY11850.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 259 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/246 (26%), Positives = 123/246 (50%), Gaps = 18/246 (7%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 KF +A F+ G S++++ +V D+ Y K +L++ +++ A Y Sbjct: 3 KFKSLATLVLAGLFVAGCSN-SNKELEQSNVQDL------YGKGQTYLQDGDYNSAIRYL 55 Query: 81 NQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 ++ ++G+ ++ L + QY G+Y +A E + YP + N+DYV+YL G+ Sbjct: 56 EAVGTKGGQYSGLGEQTQLSLIYAQYKVGEYYKALDAAERFARSYPNAANMDYVFYLAGL 115 Query: 140 SYAQM----IRDVPYDQRATKLMLQYMS------RIVERYTNSPYVKGARFYVTVGRNQL 189 S A++ I+D RA++ + + IV+RY S Y + A+ ++ N+L Sbjct: 116 SNARLSDNFIQDFFGVNRASRAVDNVRNAYGNFQTIVQRYPQSQYAQDAQNWMNYLFNRL 175 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A E+ + ++Y +R YVA + R + +L Y + ++A+ L EAY + + D ++ Sbjct: 176 AEHELAVVKFYDERNAYVAVVNRIEEMLRFYPNTLATKQALPYLKEAYKQMNIPDAEQKT 235 Query: 250 VSLIQE 255 LIQE Sbjct: 236 ELLIQE 241 >gi|222111092|ref|YP_002553356.1| outer membrane assembly lipoprotein yfio [Acidovorax ebreus TPSY] gi|221730536|gb|ACM33356.1| outer membrane assembly lipoprotein YfiO [Acidovorax ebreus TPSY] Length = 265 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 10/211 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L ++ KA + +A+++ L A+ QY G+ QA + + Sbjct: 36 KIYSEARDELNGGSYDKAVPLLEKLEGRAAGTPLAQQAQLEKAYAQYKGGEKAQAIATLD 95 Query: 119 EYITQYPESKNVDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVER 168 ++ +P S DY YL G+ S+ DQ+A K + +V R Sbjct: 96 RFMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLSRQDLSERDQKAAKDSFESFRELVTR 155 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + S Y AR +T N LA EV + RYY +RG YVAA+ R Q +A+Y D EE Sbjct: 156 FPESRYTPDARQRMTYIVNSLAQYEVHVARYYYERGAYVAAVSRAQSAVADYKDVPATEE 215 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259 A+ LV +Y AL L + ++ YPQ Sbjct: 216 ALYILVRSYDALGLTQLRDDTRRVMDASYPQ 246 >gi|170718792|ref|YP_001783974.1| hypothetical protein HSM_0636 [Haemophilus somnus 2336] gi|168826921|gb|ACA32292.1| Tetratricopeptide TPR_2 repeat protein [Haemophilus somnus 2336] Length = 262 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 10/207 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + +YEK +L++ ++S+A Y + + FP + + L + Y + Y A Sbjct: 33 QTLYEKGHSYLQDADYSQAIRYLDTAKKRFPGSQYNEQVQLDLIYAYYKSQDYTNALVTI 92 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----IRDVPYDQRAT------KLMLQYMSRIVE 167 + +I QYP+S ++DYV Y+ G+S + + +D+ RAT K +V+ Sbjct: 93 DRFIQQYPQSSHLDYVIYIAGLSNSALGDNWFQDLFGVDRATRESTSIKTAFANFQTLVQ 152 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 + NSPY A + R LA E+EI ++Y KR +VA R +L Y D + Sbjct: 153 HFPNSPYASDALARMAYIRASLARHELEIAKFYAKRNAHVAVANRVVGMLQQYPDTKATL 212 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQ 254 +A+ + AY + L A++ SLIQ Sbjct: 213 DALPLMKNAYEKMGLTKLAQQADSLIQ 239 >gi|167950144|ref|ZP_02537218.1| competence lipoprotein ComL [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 271 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 10/213 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A + + ++ A EY+ +PF A ++ L + Y + A + E + Sbjct: 38 YSEAKSAMMDGDYDGAIEYYEGLEARYPFGRYATQAQLDIIYAHYKNSEPDSAIAAAERF 97 Query: 121 ITQYPESKNVDYVYYLVGM-----SYAQMIRDVPYD--QRATKLMLQYMS---RIVERYT 170 I +P++ VDY YYL G+ +++ R +P D QR L S +V R+ Sbjct: 98 IRLHPQNSYVDYAYYLKGLANFNRNHSITTRFIPIDSSQRDAGAALTSFSDFAELVRRFP 157 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 S Y AR + RN LA ++ + RYY++RG Y+AA R V+AN+ +EA+ Sbjct: 158 ESKYASDARQRMIYLRNNLAKYQIHVARYYMRRGAYLAAANRANRVVANFQRTSVVDEAL 217 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 +V+AY L L + A + ++ G +A Sbjct: 218 QIMVDAYTRLGLKNLAADAERVLALNRQNGLFA 250 >gi|299066638|emb|CBJ37831.1| putative lipoprotein, ComL family, tetratricopeptide repeats (TPR) domain [Ralstonia solanacearum CMR15] Length = 244 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 105/211 (49%), Gaps = 10/211 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L ++SKA +Y+ + +PF A+++ + +A+ Y G+ A + + Sbjct: 15 KLYSEAKDALDGGDYSKAVKYYEKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAVD 74 Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIVER 168 +I +P +VDY YYL G+ ++ + +D+ D +A + ++ R Sbjct: 75 RFIQLHPNHPSVDYAYYLKGLINFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLLAR 134 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A + N +A EV+ RYY +RG Y+AA R Q + +Y A EE Sbjct: 135 FPNSKYAPDAAQRMQYIVNAMAEHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVEE 194 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + ++++Y AL + D + +I++ YP Sbjct: 195 GLYIMMKSYEALGMKDLRDDTERIIKQNYPN 225 >gi|118594977|ref|ZP_01552324.1| putative competence lipoprotein precursor [Methylophilales bacterium HTCC2181] gi|118440755|gb|EAV47382.1| putative competence lipoprotein precursor [Methylophilales bacterium HTCC2181] Length = 272 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/215 (25%), Positives = 109/215 (50%), Gaps = 11/215 (5%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 R E+ A +F +++ + E+ + + FP + +A + L A+ + + ++A Sbjct: 36 RTDAEIVRGAEVFSANKDWQRTIEWLEKAEKRFPNSPLAPQIKLNLAYAYKNFYRDEEAL 95 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSY--------AQMIRDVPYDQRATKL--MLQYMSR 164 ++ +++I YP +DY YYL G+ ++D+ D+ ++L + + + Sbjct: 96 AMLDKFIRTYPNHPALDYAYYLKGVVLFVDRGIVEELTLQDIS-DRDVSQLEGAFKALKQ 154 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V + S Y + A +T N+++ +E+ + RYY++R YV A+ R + VL NYS + Sbjct: 155 MVRLFPESEYAEDATNRMTYLMNKISERELHVARYYMRREAYVGALNRAKFVLENYSQSI 214 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 H EEA+ +V AY L + D A + ++ +P Sbjct: 215 HQEEALVIMVSAYNKLGIFDLAEDTKRVLDLNFPD 249 >gi|91788478|ref|YP_549430.1| hypothetical protein Bpro_2616 [Polaromonas sp. JS666] gi|91697703|gb|ABE44532.1| putative transmembrane protein [Polaromonas sp. JS666] Length = 274 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 10/179 (5%) Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM----------SY 141 +A+++ + A+ QY G+ QA + + ++ +P S +DY YL G+ S+ Sbjct: 78 LAQQAQIEKAYAQYKGGEQPQAIATLDRFMKLHPASPAMDYALYLKGLVNFNDNLGLFSF 137 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 DQ+A K + +V R+ +S Y AR + N LA EV + RYY Sbjct: 138 ISRQDLSERDQKAAKESFESFRDLVNRFPDSRYTPDARLRMAYIVNSLAQSEVHVARYYY 197 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 RG YVAAI R Q +A Y D EEA L ++Y AL +++ ++ ++++ YPQ Sbjct: 198 SRGAYVAAINRAQAAIAEYRDVPALEEATYILYKSYDALGMVELRDDMRRIMEKSYPQS 256 >gi|113460512|ref|YP_718576.1| DNA uptake lipoprotein [Haemophilus somnus 129PT] gi|112822555|gb|ABI24644.1| DNA uptake lipoprotein [Haemophilus somnus 129PT] Length = 262 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 10/207 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + +YEK +L++ ++S+A Y + + FP + + L + Y + Y A Sbjct: 33 QTLYEKGHSYLQDADYSQAIRYLDTAKKRFPGSQYNEQVQLDLIYAYYKSQDYTNALVTI 92 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----IRDVPYDQRAT------KLMLQYMSRIVE 167 + +I QYP+S ++DYV Y+ G+S + + +D+ RAT K +V+ Sbjct: 93 DRFIQQYPQSSHLDYVIYIAGLSNSALGDNWFQDLFGVDRATRESTSIKTAFANFQTLVQ 152 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 + NSPY A + R LA E+EI ++Y KR +VA R +L Y D + Sbjct: 153 HFPNSPYAADALARMAYIRASLARHELEIAKFYAKRNAHVAVANRVVGMLQQYPDTKATL 212 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQ 254 +A+ + AY + L A++ SLIQ Sbjct: 213 DALPLMKNAYEKMGLTKLAQQADSLIQ 239 >gi|71907235|ref|YP_284822.1| putative competence lipoprotein precursor [Dechloromonas aromatica RCB] gi|71846856|gb|AAZ46352.1| putative competence lipoprotein precursor [Dechloromonas aromatica RCB] Length = 257 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 10/200 (5%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + N+ KA +Y + FP+ A+++ L +V + + A + + +I +P Sbjct: 40 DGNWEKAAKYLEKLEARFPYGRYAQQAQLELGYVYWKGNEPGSALAACDRFIKLHPSHPT 99 Query: 130 VDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 VDYVYYL G+ +Y D +A + +V R+ S Y A Sbjct: 100 VDYVYYLKGLINFNEDLGLTAYISSQDPTERDPKAAREAFDAFKELVTRFPESKYAPDAS 159 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + N LA+ EV + RYY+KRG Y+AA R Q + Y A EEAM LV +Y Sbjct: 160 LRMNYLVNALASLEVHVARYYVKRGAYIAAANRAQFAVKTYPQAPAIEEAMFILVTSYDK 219 Query: 240 LALMDEAREVVSLIQERYPQ 259 + + + + ++++ +P Sbjct: 220 MGMNELRDDAQRVMKKNFPN 239 >gi|145589103|ref|YP_001155700.1| putative transmembrane protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047509|gb|ABP34136.1| putative transmembrane protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 295 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 115/250 (46%), Gaps = 18/250 (7%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 FAL + A+ L G + TD+ + ++Y +A + + +F+K +YF Sbjct: 30 FALLLAIIFALILLGGCAGSEGKK----DDTDIWPEAKLYSEATDKMNDADFAKCGKYFE 85 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + FPF ++++ + SA+ + A + QA + +I + S +DY YYL G+ Sbjct: 86 KLEARFPFGPYSQQAQINSAYCYWKAQEQAQALIAIDRFIKLHQGSPTLDYAYYLKGL-- 143 Query: 142 AQMIRDVPY------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 D+ + D +A K + +V+R+ +S Y + + N L Sbjct: 144 ITFNDDLGWLGNFTGQDLSERDPKAAKEAFESFKTVVDRFPDSKYAPDSLDRMRYIVNSL 203 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A +V + R+Y +RG Y+A+ R QLV+ +Y A EEA+ LV++Y L L + + Sbjct: 204 AEADVNVARFYYQRGAYLASANRAQLVIRDYDRAPAVEEALYILVKSYEKLGLTQLSNDS 263 Query: 250 VSLIQERYPQ 259 + +P Sbjct: 264 ARVFALNFPD 273 >gi|330501970|ref|YP_004378839.1| DNA uptake lipoprotein-like protein [Pseudomonas mendocina NK-01] gi|328916256|gb|AEB57087.1| DNA uptake lipoprotein-like protein [Pseudomonas mendocina NK-01] Length = 330 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 10/210 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y++A L +++++A +PF A ++ L + Y + + A S E Sbjct: 33 ELYQQAQADLDNRSYTQAIAKLKALESRYPFGRYAEQAQLELIYAYYKNAEPEAAKSSAE 92 Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR-----ATKLMLQYMSRIVER 168 +I +P+ NVDY YYL G+ S+ Q + R +P D A + +++ R Sbjct: 93 RFIRLHPQHANVDYAYYLKGLASFDQDRGLLARFLPLDMTKRDPGAARDSYNEFAQLTSR 152 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y S Y A+ + RN LAA E+ +G YYL R YVAA R + V+ N+ + + Sbjct: 153 YPTSRYAPDAKQRMIYLRNLLAAYEIHVGHYYLTRQAYVAAANRGRYVVENFQETPSVGD 212 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258 +A + EAY L+L D A + ++ YP Sbjct: 213 GLAIMTEAYQRLSLDDLAATSLETLKLNYP 242 >gi|241760147|ref|ZP_04758245.1| competence lipoprotein ComL [Neisseria flavescens SK114] gi|241319601|gb|EER56031.1| competence lipoprotein ComL [Neisseria flavescens SK114] Length = 267 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 10/212 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L N+++A + + FP A++S L +A+ Y + ++A + Sbjct: 37 KLYAEAQDELNSNNYTRAVKLYEILESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIA 96 Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168 + +P+ N+DY YL G+ S+ + + D +A + Q + +V+R Sbjct: 97 RFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQDWSDRDPKANRDAYQAFAELVQR 156 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + + L E+ + RYY+KRG YVAA+ R Q ++A Y + + EE Sbjct: 157 YPNSKYAADATERMAKLVDALGGNEMSVARYYMKRGAYVAAVNRAQKIVARYQNTRYVEE 216 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 A+A + AY L A + +++ +PQ Sbjct: 217 ALAMMELAYKKLDKPQLAADTRRVLETNFPQS 248 >gi|121594196|ref|YP_986092.1| hypothetical protein Ajs_1829 [Acidovorax sp. JS42] gi|120606276|gb|ABM42016.1| putative transmembrane protein [Acidovorax sp. JS42] Length = 300 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 10/211 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L ++ KA + +A+++ L A+ QY G+ QA + + Sbjct: 71 KIYSEARDELNGGSYDKAVPLLEKLEGRAAGTPLAQQAQLEKAYAQYKGGEKAQAIATLD 130 Query: 119 EYITQYPESKNVDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVER 168 ++ +P S DY YL G+ S+ DQ+A K + +V R Sbjct: 131 RFMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLSRQDLSERDQKAAKDSFESFRELVTR 190 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + S Y AR +T N LA EV + RYY +RG YVAA+ R Q +A+Y D EE Sbjct: 191 FPESRYTPDARQRMTYIVNSLAQYEVHVARYYYERGAYVAAVSRAQSAVADYKDVPATEE 250 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259 A+ LV +Y AL L + ++ YPQ Sbjct: 251 ALYILVRSYDALGLTQLRDDTRRVMDASYPQ 281 >gi|226943323|ref|YP_002798396.1| competence protein ComL [Azotobacter vinelandii DJ] gi|226718250|gb|ACO77421.1| competence protein ComL [Azotobacter vinelandii DJ] Length = 337 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 10/210 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y++A L +NF A +PF A ++ L + Y + + + S E Sbjct: 36 ELYQQAQNDLNNENFGSATTKLKALESRYPFGRYAEQAQLELIYAYYKSQETDASRSAAE 95 Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR-----ATKLMLQYMSRIVER 168 +I +P+ NVDY YYL G+ S+ Q + R +P D A + +++ R Sbjct: 96 RFIRLHPQHPNVDYAYYLKGLASFDQDRGLLSRFLPLDMTKRDPGAARDSFNEFAQLTSR 155 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A+ + RN LAA E+ + YYLKR YVAA R + V+ N + + Sbjct: 156 FPNSRYAPDAKARMVYLRNLLAAYEIHVAHYYLKREAYVAAANRGRYVVENLQETPAVGD 215 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258 +A ++EAY + L + A + ++ YP Sbjct: 216 GLAVMIEAYQRMTLDELATTSLETLKLNYP 245 >gi|254426918|ref|ZP_05040625.1| outer membrane assembly lipoprotein YfiO [Alcanivorax sp. DG881] gi|196193087|gb|EDX88046.1| outer membrane assembly lipoprotein YfiO [Alcanivorax sp. DG881] Length = 272 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 10/210 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A ++ +N+ A + + FP+ A +S L + QY + Y + + Sbjct: 33 YREASESIESKNYLTAIDQLKELEARFPYGDYAEQSALDLIYAQYKSVDYPATVVAAQRF 92 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYT 170 + YP +DY Y+ G++ M + + D A K + R+V R+ Sbjct: 93 MRNYPAHPRMDYALYMRGLANFNMEKGLFDNMVTSDRSSKDMDAAKDAFRDFERLVARFP 152 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 +S Y AR + RNQLA +E+ + RYY +RG VA+I R Q V+ +Y EE + Sbjct: 153 DSEYSPDARARMVHIRNQLARQELHVARYYARRGAIVASINRAQYVVKHYQQTPAVEEGL 212 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQG 260 A + + Y L L ++A + +++ +P Sbjct: 213 AIMTKGYQRLELPEQAEKSRAVLALNWPDS 242 >gi|224825455|ref|ZP_03698560.1| outer membrane assembly lipoprotein YfiO [Lutiella nitroferrum 2002] gi|224602376|gb|EEG08554.1| outer membrane assembly lipoprotein YfiO [Lutiella nitroferrum 2002] Length = 256 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 20/216 (9%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L N+++A + + FP+ A++S + A+ Y + + A + + Sbjct: 26 KLYAEARDELNSGNYTRAVKLYETLEARFPYGRYAQQSEMDLAYTHYKDNEPELAIAAAD 85 Query: 119 EYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSRIV 166 +I +P N+DYV YL G+ Y Q + + D RAT+ + Sbjct: 86 RFIKLHPTHPNLDYVLYLKGLVYYNDDSGLLAKWAGQDMSER--DPRATREAFLAFRELT 143 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 R+ NS Y A + L E+ + RYY+KRG Y+AA R Q V+ Y++ + Sbjct: 144 SRFPNSQYSADAAEKMNKLIKALGGHEMHVARYYMKRGAYLAAAGRAQNVVKEYANTGYL 203 Query: 227 EEAMARLVEAYVALA---LMDEAREVVSLIQERYPQ 259 EEA+A V AY L L D+AR V+ L YP+ Sbjct: 204 EEALALTVTAYDKLGMPQLRDDARRVLEL---NYPK 236 >gi|258545096|ref|ZP_05705330.1| competence lipoprotein ComL [Cardiobacterium hominis ATCC 15826] gi|258519673|gb|EEV88532.1| competence lipoprotein ComL [Cardiobacterium hominis ATCC 15826] Length = 287 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 10/193 (5%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y+ A + + + A +Y+ + +PF VA+++ L A+ Y G+ ++A S E Sbjct: 46 KLYQTAKTEMNDGAYGSASKYYTKLLARYPFGRVAQQATLDLAYAYYRDGETEKAQSEIE 105 Query: 119 EYITQYPESKNVDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +I YP+ +DY YY+ G+ I D + K + +V R Sbjct: 106 NFIRTYPQHPYIDYAYYMRGVFAYEKDVSIFDRLNPINMAQTDPQPLKQAFNHFDELVRR 165 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + S Y + ARF + +N L E+EI YY+++G Y+AAI R + VL Y Sbjct: 166 FPQSEYAEDARFRMLFIKNLLGQHELEIADYYMRKGAYIAAINRAKGVLEQYEQTPSTPY 225 Query: 229 AMARLVEAYVALA 241 A+A + AY L Sbjct: 226 ALALMTRAYRELG 238 >gi|302879314|ref|YP_003847878.1| outer membrane assembly lipoprotein YfiO [Gallionella capsiferriformans ES-2] gi|302582103|gb|ADL56114.1| outer membrane assembly lipoprotein YfiO [Gallionella capsiferriformans ES-2] Length = 264 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 102/204 (50%), Gaps = 13/204 (6%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y +A L + +++ A + + +P+ A++S+L A+ Y + A + + Sbjct: 38 ELYRQAKTELDDGSYNTAIKLYETLQSRYPYGKYAQQSMLEMAYAYYRQSEPDPAIATAD 97 Query: 119 EYITQYPESKNVDYVYYLVGMS--------YAQMIRDVPY--DQRATKLMLQYMSRIVER 168 +I Q+P + +VDY YY+ G++ + + P D +A +V R Sbjct: 98 RFIKQFPNNAHVDYAYYVKGLATFNGELSLLSSVAGQDPSERDPQAALESFNAFKALVVR 157 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A+ + N L+ E+ + +YYL+RG Y+AA+ R Q ++ Y ++ E Sbjct: 158 FPNSKYTPDAKLRLQYLVNALSRHEIHVAQYYLRRGAYIAAVNRAQDIIKQYPNSPSTRE 217 Query: 229 AMARLVEAYVALALM---DEAREV 249 A+ +++AY AL ++ D+ + V Sbjct: 218 ALQIMIDAYDALGMVQLRDDTKRV 241 >gi|109897659|ref|YP_660914.1| putative lipoprotein [Pseudoalteromonas atlantica T6c] gi|109699940|gb|ABG39860.1| putative lipoprotein [Pseudoalteromonas atlantica T6c] Length = 255 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 59/247 (23%), Positives = 114/247 (46%), Gaps = 13/247 (5%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 IF + A+ L G + + V + R + +YE A + NF+ A + Sbjct: 10 IFLAAAIIALGGCSSSPDEE---EVVVNNRSAQSLYEDAKEKMAIGNFNAATATLSALDS 66 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +PF ++ + L + Y +GK +A S + + P +VDY Y+ G++ + Sbjct: 67 RYPFGPLSNQVQLDLIYAYYKSGKVNEAISTIDRFTRLNPNHADVDYAIYMRGLTNMESD 126 Query: 146 RDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 +++ D ++ + R++++Y +S Y A+ + +++LA E+ Sbjct: 127 KNLFQELVGIDRSDRDPSKSREAFEDFRRLIDKYPDSKYAADAQKRMLHIKSRLAKYEIA 186 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 I R+Y++R +VAA R + VL Y D +H +EA+ +VE Y L L + V+ ++ Sbjct: 187 IARFYMRREAFVAAANRGRYVLEYYPDTDHVQEALEIMVECYDQLKLDELKNNVMKTLKL 246 Query: 256 RYPQGYW 262 YP + Sbjct: 247 NYPDSSF 253 >gi|89093552|ref|ZP_01166500.1| competence lipoprotein ComL, putative [Oceanospirillum sp. MED92] gi|89082242|gb|EAR61466.1| competence lipoprotein ComL, putative [Oceanospirillum sp. MED92] Length = 307 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 55/213 (25%), Positives = 104/213 (48%), Gaps = 10/213 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++++Y++A+ ++E N+ A E +PF + ++ L + + + + A + Sbjct: 33 EQQLYQEAMKAMEEVNYDLAIEKLQLLEARYPFGRFSEQTQLELIYAYFKNYEPEAARAA 92 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIV 166 + +I +P N+DY YYL G++ + I + D A + S +V Sbjct: 93 ADRFIRLHPNHDNIDYAYYLKGLTAFEQDISWITQYLPIDETQRDPGAALDSFESFSTLV 152 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 RY S Y + + +N+LAA EV + RYY++R +VAA R + V+ N + Sbjct: 153 NRYPESQYAPDSYKRMVYLKNRLAAYEVHVARYYIQREAFVAAANRGRYVIENMQETPAV 212 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +A+A ++EAY L D A + S++ + YP+ Sbjct: 213 PDALAVMIEAYTHLGQQDLAADTQSVLSQNYPE 245 >gi|254499158|ref|ZP_05111842.1| hypothetical protein LDG_3116 [Legionella drancourtii LLAP12] gi|254351619|gb|EET10470.1| hypothetical protein LDG_3116 [Legionella drancourtii LLAP12] Length = 259 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 89/181 (49%), Gaps = 10/181 (5%) Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 +PF+ S + + Y Y AA+ E +I YP +KNVDY YY+ G++ Q R Sbjct: 68 YPFSDYTESSQMDLIYAYYKNEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLANFQQTR 127 Query: 147 DV-----PYDQ--RATKLMLQYMSR---IVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 V P D+ R Q S +++++ S Y A + RN A +E+ + Sbjct: 128 GVFAKVLPLDESWRDPGTQTQAYSDFAVLIQKFPESKYKANALQRMIYLRNMFAQQELNV 187 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 ++Y KR YVAAI R ++ NY A A++A+ + ++ VAL L A EV ++ Q Sbjct: 188 SKFYFKRKMYVAAIERASYLVKNYPQAPSAQQALVIMYKSNVALGLNKTAEEVKTVYQAT 247 Query: 257 Y 257 Y Sbjct: 248 Y 248 >gi|90022197|ref|YP_528024.1| Acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase [Saccharophagus degradans 2-40] gi|89951797|gb|ABD81812.1| competence lipoprotein ComL, putative [Saccharophagus degradans 2-40] Length = 301 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 9/212 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++++Y++A L ++ A EY +PF A +S L F Y + +++ A + Sbjct: 32 EKDIYQRAQYALNHSSWDAAVEYLQLLEEHYPFGVYAEQSQLELIFAYYQSDEHEAAIAS 91 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY----AQMIRDVPYD--QR---ATKLMLQYMSRIVE 167 + +I +P+ ++VDY YY+ G++ + +P D QR + Y ++ + Sbjct: 92 ADRFIRLHPQHRSVDYAYYMRGVASFSNDTAITSFLPTDVTQRDIGTAREAFNYFNQFLN 151 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 RY +SPY A+ + RN +A E+ + YY KR Y+AA R + V+ N Sbjct: 152 RYPDSPYALDAQKRMIYLRNTMARSEIHVANYYFKREAYLAAANRGRYVVENMQGTPAVP 211 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + +A + Y L + + A + V ++ YP Sbjct: 212 DGLAVMAMGYHMLNMPELANDAVKVLIANYPN 243 >gi|332307417|ref|YP_004435268.1| outer membrane assembly lipoprotein YfiO [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174746|gb|AEE24000.1| outer membrane assembly lipoprotein YfiO [Glaciecola agarilytica 4H-3-7+YE-5] Length = 255 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 13/247 (5%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 +F + A+ L G SS D + V + R + +YE A + NF+ A + Sbjct: 10 VFLAAAIIALGGC--SSSLDEE-EVVVNNRSAQSLYEDAKEKMAIGNFNAATATLSALDS 66 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +PF ++ + L + Y +GK +A S + + P +VDY Y+ G++ + Sbjct: 67 RYPFGPLSNQVQLDLIYAYYKSGKVNEAISTIDRFTRLNPNHADVDYAIYMRGLTNMESD 126 Query: 146 RDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 +++ D ++ + R++E++ +S Y A+ + +++LA E+ Sbjct: 127 KNLFQELVGIDRSDRDPSKSREAFEDFRRLIEKFPDSKYAADAQKRMLHIKSRLAKYEIA 186 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 I R+Y++R YVAA R + VL Y D +H +EA+ +VE Y L L + V+ ++ Sbjct: 187 IARFYMRREAYVAAANRGRYVLEYYPDTDHVQEALEIMVECYDQLKLDELKNNVMKTLKL 246 Query: 256 RYPQGYW 262 YP + Sbjct: 247 NYPDSSF 253 >gi|70732612|ref|YP_262375.1| competence lipoprotein ComL [Pseudomonas fluorescens Pf-5] gi|68346911|gb|AAY94517.1| competence lipoprotein ComL [Pseudomonas fluorescens Pf-5] Length = 341 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 14/228 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS++V +++++V E+Y++A L +++ A +PF A ++ L Sbjct: 19 SSKEVVDENLSEV----ELYQQAQTDLDNHSYTSATAKLKALESRYPFGRYADQAQLELI 74 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153 + Y + + A S E +I +P+ NVDY YYL G+ S+ Q + R +P D Sbjct: 75 YANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDVGLLARFLPLDMTKRD 134 Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 A + +++ R+ NS Y A+ + RN LAA E+ + YYL R YVAA Sbjct: 135 PGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLAAYEIHVADYYLTRQAYVAAAN 194 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A + EAY L L + A + ++ YP Sbjct: 195 RGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELAATSLETLKLNYPN 242 >gi|82703096|ref|YP_412662.1| TPR repeat-containing protein [Nitrosospira multiformis ATCC 25196] gi|82411161|gb|ABB75270.1| TPR repeat [Nitrosospira multiformis ATCC 25196] Length = 266 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 14/213 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A L + N++ A + F +P+ A+++ L + Y G+ A + + + Sbjct: 35 YTEAKSELNDGNYAAAIKLFEALEARYPYGRYAQQAQLEIGYAHYKDGEQALAIAAADRF 94 Query: 121 ITQYPESKNVDYVYYLVGMSYAQ-------------MIRDVP-YDQRATKLMLQYMSRIV 166 I +P NVDY YYL G++ + +D+ D +A+ + +V Sbjct: 95 IKLHPNHPNVDYAYYLKGLANFNDDLGLMGIVTEKILNQDMSERDPKASHESFENFKELV 154 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 R+ S Y A + N +A E+++ RYY+KRG YVAA R Q L Y Sbjct: 155 NRFPKSKYAPDAVQRMKHLVNVVALNEIQVARYYMKRGGYVAAANRAQYALKEYPQTPAT 214 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 EEA+ +V+AY AL + D + ++++ +P Sbjct: 215 EEALFIMVKAYDALGMTDLRDDADRVMRKNFPN 247 >gi|225023855|ref|ZP_03713047.1| hypothetical protein EIKCOROL_00721 [Eikenella corrodens ATCC 23834] gi|224943329|gb|EEG24538.1| hypothetical protein EIKCOROL_00721 [Eikenella corrodens ATCC 23834] Length = 269 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A ++ +N+S++ + FP A +S L +A+V Y + QA + E Sbjct: 39 KLYAEAHDEMESRNYSRSVRLYEILRARFPNTRQAVQSRLDTAYVYYKDEQQPQALAHVE 98 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVER 168 +++ YP N DY YL G+ + + D +A + Q + ++ R Sbjct: 99 QFLKLYPNHPNTDYALYLKGLIVLNQDKSIFNKLASQDWSDRDPKANREAYQVFNELITR 158 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + +S Y AR + + L E+ I RYY++RG Y+AA R Q +++ Y + + EE Sbjct: 159 FPDSKYANDAREKMARLVDALGGNEMAIARYYMQRGAYLAAANRAQGIVSRYQNTRYVEE 218 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 A+A ++ AY L + + + ++ + +PQ Sbjct: 219 ALAIMMTAYARLEKPELSSDTRRVLAQNFPQS 250 >gi|297180915|gb|ADI17119.1| DNA uptake lipoprotein [uncultured gamma proteobacterium HF0070_03O15] gi|297181509|gb|ADI17696.1| DNA uptake lipoprotein [uncultured gamma proteobacterium HF0130_23I23] Length = 238 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 10/203 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y+++ + +NF A E ++ R +PF A ++ + Y +G Y A + E+ Sbjct: 33 LYKQSQDRINAKNFIGAVESLSRIERFYPFGVYAEQARADLIYAFYMSGDYDNAYASSEK 92 Query: 120 YITQYPESKNVDYVYYLVGMS-------YAQMIRDVPYDQRATKLMLQYMSRIVE---RY 169 +I YP + N+DY Y++ GM+ + + +R ++ + + E RY Sbjct: 93 FIRLYPRNTNIDYAYFMRGMTGYYEDDGLLSSVFSLDLSKRDVSTAMKSYADLTEFMIRY 152 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 S YV AR + RN +A+ E++ YYLKRG Y+ A+ R VL N D+ + A Sbjct: 153 PESEYVDVARERLIFLRNLIASSELDGAEYYLKRGAYLGALNRANYVLKNIPDSSEKDRA 212 Query: 230 MARLVEAYVALALMDEAREVVSL 252 + + EAY L + A E+V+ Sbjct: 213 LRIMKEAYEKLGYDEYAEEIVAF 235 >gi|237748963|ref|ZP_04579443.1| competence lipoprotein ComL [Oxalobacter formigenes OXCC13] gi|229380325|gb|EEO30416.1| competence lipoprotein ComL [Oxalobacter formigenes OXCC13] Length = 266 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 14/214 (6%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L N+ KA EYF + +PF A+++ + A+ Y + QA + E Sbjct: 37 KLYREAKEELNSGNYEKAVEYFEKLEARYPFGIYAQQAQMDIAYAYYRQNEQAQALAAAE 96 Query: 119 EYITQYPESKNVDYVYYLVGM------------SYAQMIRDVPYDQRATKLMLQYMSRIV 166 +I +P N+DY+YYL G+ ++ Q + + D +A + +V Sbjct: 97 RFIKLHPNHPNIDYMYYLKGLINFNDRLGLLNFAFRQDLSER--DPKAAQDAFDAFKVLV 154 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 RY +S Y K A + LA E+ + +YY +RG Y+AA R Q + NY ++ Sbjct: 155 TRYPDSVYAKDAMLRMKYLVTMLAKYEIHVAKYYYRRGAYLAAANRAQRTIKNYPESHVV 214 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 EEA+ + ++Y L L D + + + ++ YP Sbjct: 215 EEALYIMAQSYKKLGLYDLSADAERVFKQNYPDS 248 >gi|300312308|ref|YP_003776400.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gi|300075093|gb|ADJ64492.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 266 Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 10/214 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L + KA +YF + +PF A+++ + A+ Y + Q + + Sbjct: 37 KLYSEAKDELNAGGYDKAIKYFEKLESRYPFGTYAQQAQMDIAYAYYRQNEQAQGLAAVD 96 Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPYDQRATKLM---LQYMSRIVER 168 +I +P NVDY+YYL G+ S D +R K M + ER Sbjct: 97 RFIKLHPNHPNVDYMYYLRGLINFNDRTSIFDTFTDQDNTERDPKAMRDAFDSFKLLAER 156 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + +S Y A + N ++ +V + YY +RG YV+A R Q + Y D+ EE Sbjct: 157 FPDSKYTPDAIARMKYLVNAMSQYDVHVASYYFRRGAYVSAANRAQSAIKQYPDSPANEE 216 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 A+ L+ +Y AL + +IQ YP W Sbjct: 217 ALFILMRSYEALGQTKLKEDTERIIQATYPNSPW 250 >gi|330831469|ref|YP_004394421.1| ComL family lipoprotein [Aeromonas veronii B565] gi|328806605|gb|AEB51804.1| Lipoprotein, ComL family [Aeromonas veronii B565] Length = 254 Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 10/215 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y+KA L L N+ +A E +PF + + L + Y QA + + Sbjct: 39 LYQKARLKLDVGNYVQATELLEALDSRYPFGAYSNQVQLDLIYAYYKQDDTAQAIANIDR 98 Query: 120 YITQYPESKNVDYVYYLVGMS-------YAQMIRDVPYDQRAT---KLMLQYMSRIVERY 169 +I P KN+DYV+Y+ G++ + Q + + D + + Q +++ Y Sbjct: 99 FIRLNPAHKNIDYVFYMRGLTNMAADYNFFQSLFGIDRDDKDPAYARQAFQDFKTLLQNY 158 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 NS Y AR + +N+LA ++ + YY+KR VAA R +L++ Y D E+A Sbjct: 159 PNSVYAADARARMIGLKNRLARYDLSVAEYYVKRDALVAAANRAKLIVETYPDTAETEKA 218 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 + +VE+Y +L + A+ ++ + YP+ AR Sbjct: 219 LEIMVESYDSLKMPQLAKHAREVLAKNYPENRLAR 253 >gi|46202602|ref|ZP_00052938.2| COG4105: DNA uptake lipoprotein [Magnetospirillum magnetotacticum MS-1] Length = 164 Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 60/104 (57%) Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++ + +V+R+ +S Y + AR + + R+ LA KE+ IGRYY G ++AA+ RF++V Sbjct: 1 MKILHEVVDRFPSSVYARDARLKIDLARDHLAGKEMNIGRYYQNLGHHLAALNRFKMVAE 60 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 Y H EA+ R+VE Y AL L EA +++ +P W Sbjct: 61 QYQTTTHVPEALYRMVELYTALGLDQEAARAAAVLGHNFPGSDW 104 >gi|269140176|ref|YP_003296877.1| lipoprotein [Edwardsiella tarda EIB202] gi|267985836|gb|ACY85665.1| lipoprotein [Edwardsiella tarda EIB202] gi|304560009|gb|ADM42673.1| Putative lipoprotein assembly complex component [Edwardsiella tarda FL6-60] Length = 245 Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ NF A +PF +++ L + Y + A + + Sbjct: 34 EIYATAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPMAQATID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P S+N+ YV Y+ G++ M I D + + S++V+R Sbjct: 94 RFIRLNPTSQNMPYVLYMRGLTDMAMDDSALQGFFGIDRSDRDPEHARQAFRDFSQLVQR 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +N+LA E+ + R+Y KRG YVA + R + +L NY D + + Sbjct: 154 YPNSAYTTDATKRLLFLKNRLAKHELAVARFYTKRGAYVAVVNRVEQMLRNYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + L EA +V +I Sbjct: 214 ALPLMENAYRQMGLNGEADKVQKII 238 >gi|325143910|gb|EGC66220.1| competence lipoprotein comL [Neisseria meningitidis M01-240013] gi|325206454|gb|ADZ01907.1| competence lipoprotein comL [Neisseria meningitidis M04-240196] Length = 267 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L N+++A + + FP + AR+S L +A+ Y + +A + E Sbjct: 37 KLYAEAQDELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIE 96 Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168 + +P+ N+DY YL G+ S+ + + D +A + Q + +V+R Sbjct: 97 RFRRLHPQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQR 156 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A + + L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE Sbjct: 157 FPNSKYAADATARMVKLVDALGGNEISVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEE 216 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 ++A L AY L A + +++ +P+ Sbjct: 217 SLAILELAYQKLGKPQLAADTRRVLETNFPKS 248 >gi|161869645|ref|YP_001598811.1| competence lipoprotein [Neisseria meningitidis 053442] gi|161595198|gb|ABX72858.1| competence lipoprotein [Neisseria meningitidis 053442] gi|325127791|gb|EGC50699.1| competence lipoprotein comL [Neisseria meningitidis N1568] gi|325133783|gb|EGC56439.1| competence lipoprotein comL [Neisseria meningitidis M13399] gi|325203790|gb|ADY99243.1| competence lipoprotein comL [Neisseria meningitidis M01-240355] Length = 267 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L N+++A + + FP + AR+S L +A+ Y + +A + E Sbjct: 37 KLYAEAQDELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIE 96 Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168 + +P+ N+DY YL G+ S+ + + D +A + Q + +V+R Sbjct: 97 RFRRLHPQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQR 156 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A + + L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE Sbjct: 157 FPNSKYAADATARMVKLVDALGGNEISVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEE 216 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 ++A L AY L A + +++ +P+ Sbjct: 217 SLAILELAYQKLGKPQLAADTRRVLETNFPKS 248 >gi|15599741|ref|NP_253235.1| competence protein ComL [Pseudomonas aeruginosa PAO1] gi|107099792|ref|ZP_01363710.1| hypothetical protein PaerPA_01000810 [Pseudomonas aeruginosa PACS2] gi|116052690|ref|YP_793006.1| competence protein ComL [Pseudomonas aeruginosa UCBPP-PA14] gi|218893640|ref|YP_002442509.1| competence protein ComL [Pseudomonas aeruginosa LESB58] gi|254238707|ref|ZP_04932030.1| competence protein ComL [Pseudomonas aeruginosa C3719] gi|254244557|ref|ZP_04937879.1| competence protein ComL [Pseudomonas aeruginosa 2192] gi|296391366|ref|ZP_06880841.1| competence protein ComL [Pseudomonas aeruginosa PAb1] gi|12231047|sp|P33641|Y9F5_PSEAE RecName: Full=UPF0169 lipoprotein PA4545; AltName: Full=ORFY; Flags: Precursor gi|9950789|gb|AAG07933.1|AE004868_4 competence protein ComL [Pseudomonas aeruginosa PAO1] gi|32423743|gb|AAP81267.1| competence protein [Pseudomonas aeruginosa PA14] gi|115587911|gb|ABJ13926.1| competence lipoprotein ComL [Pseudomonas aeruginosa UCBPP-PA14] gi|126170638|gb|EAZ56149.1| competence protein ComL [Pseudomonas aeruginosa C3719] gi|126197935|gb|EAZ61998.1| competence protein ComL [Pseudomonas aeruginosa 2192] gi|218773868|emb|CAW29682.1| competence protein ComL [Pseudomonas aeruginosa LESB58] Length = 341 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 10/222 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 ++V + + ++Y++A L ++++ A +PF A ++ L + Y Sbjct: 23 ETVDENLSESQLYQQAQDDLNNKSYNSAVTKLKALESRYPFGRYAEQAQLELIYANYKNM 82 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-----AQMIRDVPYDQR-----ATKLM 158 + + A + E +I +P+ NVDY YYL G+S + R +P D A + Sbjct: 83 EPEAARAAAERFIRLHPQHPNVDYAYYLKGLSSFDQDRGLLARFLPLDMTKRDPGAARDS 142 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 +++ R+ NS Y A+ + RN LAA EV +G YYLKR YVAA R + V+ Sbjct: 143 FNEFAQLTSRFPNSRYAPDAKARMVYLRNLLAAYEVHVGHYYLKRQAYVAAANRGRYVVE 202 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 N+ + + +A +VEAY L L D A + ++ YP Sbjct: 203 NFQETPAVGDGLAIMVEAYRRLGLDDLASTSLETLKLNYPDN 244 >gi|237653788|ref|YP_002890102.1| outer membrane assembly lipoprotein YfiO [Thauera sp. MZ1T] gi|237625035|gb|ACR01725.1| outer membrane assembly lipoprotein YfiO [Thauera sp. MZ1T] Length = 269 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 10/217 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +++Y +A + E + +A F + +P+ A+++ L A+ Y G+ A + Sbjct: 40 QKLYSEAKASMSEGGYDRAVTLFEKLEARYPYGRFAQQAQLEVAYAYYKQGEQALALAAA 99 Query: 118 EEYITQYPESKNVDYVYYLVGMS--------YAQMIRD--VPYDQRATKLMLQYMSRIVE 167 + +I +P NVDY YYL G+ A + R D + + +VE Sbjct: 100 DRFIKLHPNHPNVDYAYYLKGLVNFNEDLGLLAGLSRQDLSERDPKGAREAFDSFRELVE 159 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 R+ S Y +R + N LA+ EV + RYY RG YVAAI R Q + N+ A E Sbjct: 160 RFPESRYADDSRARMQYLINSLASHEVHVSRYYYNRGAYVAAINRAQTAVNNFPQAPAIE 219 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 EA+ +V +Y L + + ++++ +P + R Sbjct: 220 EALFLMVMSYDKLGMAQLRDDADRVMRKNFPDSVYFR 256 >gi|121604766|ref|YP_982095.1| hypothetical protein Pnap_1864 [Polaromonas naphthalenivorans CJ2] gi|120593735|gb|ABM37174.1| putative transmembrane protein [Polaromonas naphthalenivorans CJ2] Length = 274 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 10/178 (5%) Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS--------YAQ 143 +A+++ L A+ QY G+ QA + ++ +P S +DY YL G+ + Sbjct: 78 LAQQAQLDKAYAQYKGGEQAQALATLNRFMKLHPASPAMDYALYLKGLVNFNDNLGIFGS 137 Query: 144 MIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + R DQ A K + +V R+ +S Y AR + N LA EV + RYY Sbjct: 138 ISRQDLSERDQNAAKESFESFKELVARFPDSRYAPDARLRMNYIVNSLAKSEVHVARYYY 197 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 RG YVAAI R Q +A+Y D EEA L ++Y AL + + ++ ++ + YPQ Sbjct: 198 SRGAYVAAINRAQSAIADYRDVPALEEATFILYKSYDALGMTELRDDMRRIMDKSYPQ 255 >gi|146329582|ref|YP_001210176.1| competence protein ComL [Dichelobacter nodosus VCS1703A] gi|146233052|gb|ABQ14030.1| competence protein ComL [Dichelobacter nodosus VCS1703A] Length = 278 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 108/208 (51%), Gaps = 13/208 (6%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++Y+ ++ +++ A +YF + +P+ +A++S+L A+ Y AG+ ++A + Sbjct: 34 HQLYQAGKTEMESSSYTTAIDYFTKLLARYPYGVLAQQSMLDIAYSYYRAGEAEKALAQL 93 Query: 118 EEYITQYPESKNVDYVYYLVGM-SYAQMI----RDVPYDQRAT-----KLMLQYMSRIVE 167 + + YP+ +DY Y+ G+ Y + I R +P D T K +++VE Sbjct: 94 DSFSKTYPQHPYIDYALYMKGVVEYEKNISFFKRLLPTDLSQTDPTPLKNAFDLFAQLVE 153 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 R+ S Y + AR+ + N L ++EI +YL++G++VAA R + +L +Y A Sbjct: 154 RFPQSEYAEDARYRMIFLHNLLGKHDLEIADFYLRKGDFVAAAARAKNILEHYETTPSAP 213 Query: 228 EAMARLVEAYVALA---LMDEAREVVSL 252 A+A ++ AY L L D+A V ++ Sbjct: 214 YALAIMIRAYRELGQKLLADDAMRVFNM 241 >gi|313107190|ref|ZP_07793389.1| competence protein ComL [Pseudomonas aeruginosa 39016] gi|310879891|gb|EFQ38485.1| competence protein ComL [Pseudomonas aeruginosa 39016] Length = 341 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 10/222 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 ++V + + ++Y++A L ++++ A +PF A ++ L + Y Sbjct: 23 ETVDENLSESQLYQQAQDDLNNKSYNSAVTKLKALESRYPFGRYAEQAQLELIYANYKNM 82 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-----AQMIRDVPYDQR-----ATKLM 158 + + A + E +I +P+ NVDY YYL G+S + R +P D A + Sbjct: 83 EPEAARAAAERFIRLHPQHPNVDYAYYLKGLSSFDQDRGLLARFLPLDMTKRDPGAARDS 142 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 +++ R+ NS Y A+ + RN LAA EV +G YYLKR YVAA R + V+ Sbjct: 143 FNEFAQLTSRFPNSRYAPDAKARMVYLRNLLAAYEVHVGHYYLKRQAYVAAANRGRYVVE 202 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 N+ + + +A +VEAY L L D A + ++ YP Sbjct: 203 NFQETPAVGDGLAIMVEAYRRLGLDDLASTSLETLKLNYPDN 244 >gi|152988068|ref|YP_001350516.1| competence protein ComL [Pseudomonas aeruginosa PA7] gi|150963226|gb|ABR85251.1| competence protein ComL [Pseudomonas aeruginosa PA7] Length = 341 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 10/222 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 ++V + + ++Y++A L ++++ A +PF A ++ L + Y Sbjct: 23 ETVDENLSESQLYQQAQDDLNNKSYNSAVTKLKALESRYPFGRYAEQAQLELIYANYKNM 82 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-----PYDQR-----ATKLM 158 + + A + E +I +P+ NVDY YYL G+S R + P D A + Sbjct: 83 EPEAARAAAERFIRLHPQHPNVDYAYYLKGLSSFDQDRGLVARFLPLDMTKRDPGAARDS 142 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 +++ R+ NS Y A+ + RN LAA EV +G YYLKR YVAA R + V+ Sbjct: 143 FNEFAQLTSRFPNSRYAPDAKARMVYLRNLLAAYEVHVGHYYLKRQAYVAAANRGRYVVE 202 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 N+ + + +A +VEAY L L D A + ++ YP Sbjct: 203 NFQETPAVGDGLAIMVEAYRRLGLDDLASTSLETLKLNYPDN 244 >gi|153209399|ref|ZP_01947385.1| competence lipoprotein ComL [Coxiella burnetii 'MSU Goat Q177'] gi|120575370|gb|EAX31994.1| competence lipoprotein ComL [Coxiella burnetii 'MSU Goat Q177'] Length = 255 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 10/216 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E++ L ++++S+A + F +PF A ++ L + Y A + + Sbjct: 35 ELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQLDIIYAYYKNNDTSSAIAAAD 94 Query: 119 EYITQYPESKNVDYVYYL-------VGMSYAQ-MIRDVPYDQRATKLMLQYMS--RIVER 168 YI YP +NVDY YY+ +G+S+ Q + R P + + L + S + E Sbjct: 95 RYIRLYPRGRNVDYAYYMRGVIGFDLGLSWLQKLARVSPVSRDVSTLQQSFTSFATLAEV 154 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + +S Y A + RN +A +E+ I +Y+KR YVAA R V+ ++ + + Sbjct: 155 FPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVAAANRGSYVVQHFQGSPQVAK 214 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 A+A +V+AY AL L A L+Q YP AR Sbjct: 215 ALAIMVQAYRALGLPKMADASNHLLQTNYPHTLEAR 250 >gi|319794366|ref|YP_004156006.1| outer membrane assembly lipoprotein yfio [Variovorax paradoxus EPS] gi|315596829|gb|ADU37895.1| outer membrane assembly lipoprotein YfiO [Variovorax paradoxus EPS] Length = 268 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 10/178 (5%) Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM--------SYAQ 143 +A+++ L A+ QY G+ A + + ++ +P S +DY YL G+ +A Sbjct: 72 LAQQAQLEKAYAQYKGGEKASAIATIDRFMKLHPASPALDYALYLKGVINFNDDLGMFAF 131 Query: 144 MIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + R DQ+A K + +V R+ +S Y AR + N LA EV + RYY Sbjct: 132 LTRQDLSERDQKAAKESFESFRDLVTRFPDSRYAPDARQRMNYIVNSLAQYEVHVARYYY 191 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 RG Y+AAI R Q+ LA+Y + EEA+ +V++Y AL + D + ++ YPQ Sbjct: 192 TRGAYLAAINRAQIALADYREVPALEEALYIMVKSYDALGMKDLRDDAQRVLTTNYPQ 249 >gi|229588325|ref|YP_002870444.1| putative lipoprotein [Pseudomonas fluorescens SBW25] gi|229360191|emb|CAY47048.1| putative lipoprotein [Pseudomonas fluorescens SBW25] Length = 341 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 21/245 (8%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 + I A C S++DV +++++V E+Y+ A L +++ A Sbjct: 9 IAILAMTAAC-------SSTKDVVDENLSEV----ELYQLAQKDLDNNSYTSATAKLKAL 57 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYA 142 +PF A ++ L + Y + + A S E +I +P+ NVDY YY+ G+ S+ Sbjct: 58 ESRYPFGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFD 117 Query: 143 Q----MIRDVPYDQR-----ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Q + R +P D A + +++ RY NS Y A+ + RN LA+ E Sbjct: 118 QDVGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYE 177 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + YYL R YVAA R + V+ N+ + + +A + EAY L L + A + + Sbjct: 178 IHVAHYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELASTSLETL 237 Query: 254 QERYP 258 + YP Sbjct: 238 KLNYP 242 >gi|294339950|emb|CAZ88313.1| Competence lipoprotein comL precursor [Thiomonas sp. 3As] Length = 273 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 117/264 (44%), Gaps = 25/264 (9%) Query: 9 ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68 + ++ W +L L ++ + L G S+D L + ++Y +A + Sbjct: 3 VALYRLWTLRL----LGAAAAVVLLGLAGCASTPSKDETLGWSS-----AKLYAEAKDEM 53 Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 N K + + + +P+ +A+++L+ A+ Y G+ QA + + ++ YP + Sbjct: 54 NSGNTDKGVKLYEKLESRYPYGLLAQQALIEIAYGNYKQGERAQALAAADRFLKLYPNNP 113 Query: 129 NVDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 DYV YL G+ S+ + DQ A K + +V R+ S Y A Sbjct: 114 YTDYVLYLKGLINFNTNQGWFSFLSDQKLYERDQAAAKQSFESFKELVTRFPESKYAPDA 173 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 R + N LA E + +Y +RG YVAA R Q + +Y DA + A+A LV+AY Sbjct: 174 RQRMRYIVNSLAEYETHVALFYYRRGAYVAAADRAQRAIEHYQDAPANQLALAILVDAYG 233 Query: 239 ALA---LMDEAREVVSLIQERYPQ 259 L L D+A V+ L YPQ Sbjct: 234 KLGMTQLRDDAERVLKL---NYPQ 254 >gi|161830296|ref|YP_001596931.1| competence lipoprotein ComL [Coxiella burnetii RSA 331] gi|161762163|gb|ABX77805.1| competence lipoprotein ComL [Coxiella burnetii RSA 331] Length = 255 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 10/216 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E++ L ++++S+A + F +PF A ++ L + Y A + + Sbjct: 35 ELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQLDIIYAYYKNNDTSSAIAAAD 94 Query: 119 EYITQYPESKNVDYVYYL-------VGMSYAQ-MIRDVPYDQRATKLMLQYMS--RIVER 168 YI YP +NVDY YY+ +G+S+ Q + R P + + L + S + E Sbjct: 95 RYIRLYPRGRNVDYAYYMRGVISFDLGLSWLQKLARVSPVSRDVSTLQQSFTSFATLAEV 154 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + +S Y A + RN +A +E+ I +Y+KR YVAA R V+ ++ + + Sbjct: 155 FPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVAAANRGSYVVQHFQGSPQVAK 214 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 A+A +V+AY AL L A L+Q YP AR Sbjct: 215 ALAIMVQAYRALGLPKMADASNHLLQTNYPHTLEAR 250 >gi|225076528|ref|ZP_03719727.1| hypothetical protein NEIFLAOT_01576 [Neisseria flavescens NRL30031/H210] gi|224952207|gb|EEG33416.1| hypothetical protein NEIFLAOT_01576 [Neisseria flavescens NRL30031/H210] Length = 267 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 10/212 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L N+++A + + FP A++S L +A+ Y + ++A + Sbjct: 37 KLYAEAQDELNSNNYTRAVKLYEILESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIA 96 Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168 + +P+ N+DY YL G+ S+ + + D +A + Q + +V+R Sbjct: 97 RFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQDWSDRDPKANRDAYQAFAELVQR 156 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + + L E+ + RYY+KRG YVAA R Q +++ Y + + EE Sbjct: 157 YPNSKYAADATERMAKLVDALGGNEISVARYYMKRGAYVAAANRAQKIVSRYQNTRYVEE 216 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 A+A + AY L A + +++ +PQ Sbjct: 217 ALAMMELAYKKLDKPQLAADTRRVLETNFPQS 248 >gi|215919037|ref|NP_819783.2| competence lipoprotein ComL [Coxiella burnetii RSA 493] gi|206583922|gb|AAO90297.2| lipoprotein, ComL family [Coxiella burnetii RSA 493] Length = 272 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 10/216 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E++ L ++++S+A + F +PF A ++ L + Y A + + Sbjct: 52 ELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQLDIIYAYYKNNDTSSAIAAAD 111 Query: 119 EYITQYPESKNVDYVYYL-------VGMSYAQ-MIRDVPYDQRATKLMLQYMS--RIVER 168 YI YP +NVDY YY+ +G+S+ Q + R P + + L + S + E Sbjct: 112 RYIRLYPRGRNVDYAYYMRGVISFDLGLSWLQKLARVSPVSRDVSTLQQSFTSFATLAEV 171 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + +S Y A + RN +A +E+ I +Y+KR YVAA R V+ ++ + + Sbjct: 172 FPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVAAANRGSYVVQHFQGSPQVAK 231 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 A+A +V+AY AL L A L+Q YP AR Sbjct: 232 ALAIMVQAYRALGLPKMADASNHLLQTNYPHTLEAR 267 >gi|209363886|ref|YP_001424166.2| lipoprotein, ComL family [Coxiella burnetii Dugway 5J108-111] gi|212218243|ref|YP_002305030.1| lipoprotein, ComL family [Coxiella burnetii CbuK_Q154] gi|207081819|gb|ABS77330.2| lipoprotein, ComL family [Coxiella burnetii Dugway 5J108-111] gi|212012505|gb|ACJ19885.1| lipoprotein, ComL family [Coxiella burnetii CbuK_Q154] Length = 272 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 10/216 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E++ L ++++S+A + F +PF A ++ L + Y A + + Sbjct: 52 ELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQLDIIYAYYKNNDTSSAIAAAD 111 Query: 119 EYITQYPESKNVDYVYYL-------VGMSYAQ-MIRDVPYDQRATKLMLQYMS--RIVER 168 YI YP +NVDY YY+ +G+S+ Q + R P + + L + S + E Sbjct: 112 RYIRLYPRGRNVDYAYYMRGVIGFDLGLSWLQKLARVSPVSRDVSTLQQSFTSFATLAEV 171 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + +S Y A + RN +A +E+ I +Y+KR YVAA R V+ ++ + + Sbjct: 172 FPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVAAANRGSYVVQHFQGSPQVAK 231 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 A+A +V+AY AL L A L+Q YP AR Sbjct: 232 ALAIMVQAYRALGLPKMADASNHLLQTNYPHTLEAR 267 >gi|296135787|ref|YP_003643029.1| outer membrane assembly lipoprotein YfiO [Thiomonas intermedia K12] gi|295795909|gb|ADG30699.1| outer membrane assembly lipoprotein YfiO [Thiomonas intermedia K12] Length = 273 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 117/264 (44%), Gaps = 25/264 (9%) Query: 9 ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68 + ++ W +L L ++ + L G S+D L + ++Y +A + Sbjct: 3 VVLYRLWTLRL----LGAAAAVVLLGLAGCASTPSKDETLGWSS-----AKLYAEAKDEM 53 Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 N K + + + +P+ +A+++L+ A+ Y G+ QA + + ++ YP + Sbjct: 54 NSGNTDKGVKLYEKLESRYPYGLLAQQALIEIAYGNYKQGERAQALAAADRFLKLYPNNP 113 Query: 129 NVDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 DYV YL G+ S+ + DQ A K + +V R+ S Y A Sbjct: 114 YTDYVLYLKGLINFNTDQGWFSFLSDQKLYERDQAAAKQSFESFKELVTRFPESKYAPDA 173 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 R + N LA E + +Y +RG YVAA R Q + +Y DA + A+A LV+AY Sbjct: 174 RQRMRYIVNSLAEYETHVALFYYRRGAYVAAADRAQRAIEHYQDAPANQLALAILVDAYG 233 Query: 239 ALA---LMDEAREVVSLIQERYPQ 259 L L D+A V+ L YPQ Sbjct: 234 KLGMTQLRDDAERVLKL---NYPQ 254 >gi|56460292|ref|YP_155573.1| competence lipoprotein ComL [Idiomarina loihiensis L2TR] gi|56179302|gb|AAV82024.1| Competence lipoprotein ComL [Idiomarina loihiensis L2TR] Length = 256 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/245 (24%), Positives = 115/245 (46%), Gaps = 15/245 (6%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 +F S+ L G QS + S T + Y +Y++A + N + A E + ++ Sbjct: 11 VFSSVLGLMLAGCSSQSDEEQV--SKTQIEY---LYDQAQESMANGNLNLAQEQLSSLNK 65 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +PF A + L ++ Y +A + + +I+ P K+VDY Y+ G+ + Sbjct: 66 RYPFGPFAHQIQLDLIYLHYKLDNTDEALAAIDRFISLNPNHKDVDYALYMRGLVNQRAE 125 Query: 146 RDVPY----------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + + D + + + +V +Y S Y A+ + +++LA KE+ Sbjct: 126 HNAIHNLAGVDRSDRDSSMAQAAFKDFAELVRKYPKSEYAADAKKRLIALKSRLAKKELA 185 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 I +YY++R Y+AA R + VL ++SD E A+A +VE+Y L L + + + +++ Sbjct: 186 IAQYYMERQAYLAAANRGRYVLEHFSDTPEVENALAIMVESYDQLELPELREDAMKVLRA 245 Query: 256 RYPQG 260 +P+ Sbjct: 246 NFPEN 250 >gi|110833336|ref|YP_692195.1| competence lipoprotein ComL [Alcanivorax borkumensis SK2] gi|110646447|emb|CAL15923.1| competence lipoprotein ComL, putative [Alcanivorax borkumensis SK2] Length = 272 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 10/210 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A ++ +N+ A + + FP+ A +S L + QY + Y + + Sbjct: 33 YREARESIESKNYLTAIDQLKELEARFPYGDYAEQSALDLIYAQYKSVDYPATVVAAQRF 92 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYT 170 + +P +DY Y+ G++ M + + D A K + R+V R+ Sbjct: 93 MRNHPAHPRMDYALYMRGLANFNMEKGLFDNMVASDRSSKDMAAAKDAFRDFERLVSRFP 152 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 +S Y AR + RNQLA +E+ + RYY +RG VA++ R Q V+ +Y EE++ Sbjct: 153 DSEYAPDARARMVHIRNQLARQELHVARYYARRGAIVASLNRAQYVVKHYQHTPAVEESL 212 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQG 260 A +V+ Y L L +A + +++ +P Sbjct: 213 AIMVKGYQRLELPKQAEKSRAVLALNWPNS 242 >gi|256257867|ref|ZP_05463403.1| COML, competence lipoprotein [Brucella abortus bv. 9 str. C68] gi|260884157|ref|ZP_05895771.1| competence protein ComL [Brucella abortus bv. 9 str. C68] gi|260873685|gb|EEX80754.1| competence protein ComL [Brucella abortus bv. 9 str. C68] Length = 162 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 1/145 (0%) Query: 29 SIAVCFLVGWERQSSRDVYLDS-VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 +IAV + + D+ L V + ++Y + + L +A + F R Sbjct: 18 TIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAKKFAAIDRQH 77 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 P+ ARK+L+M+AF Y G Y++A S+ + Y T YP S Y YY++G+SY + I D Sbjct: 78 PYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLSYFRQIPD 137 Query: 148 VPYDQRATKLMLQYMSRIVERYTNS 172 V DQ A++ + M +++R+ NS Sbjct: 138 VTRDQAASRRAIAAMQEVIDRFPNS 162 >gi|329895228|ref|ZP_08270892.1| putative component of the lipoprotein assembly complex [gamma proteobacterium IMCC3088] gi|328922466|gb|EGG29808.1| putative component of the lipoprotein assembly complex [gamma proteobacterium IMCC3088] Length = 303 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/249 (25%), Positives = 117/249 (46%), Gaps = 23/249 (9%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L IF +A C L+ S+ + LDS + Q ++Y +A +L+ +N+ A + Q Sbjct: 20 LRIF--LASCILLLGACASNDE--LDSQANAAEQ-QIYSEAQKYLRSKNYDMAIKALQQL 74 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS--- 140 +PF A ++ L + Y A + + A +I +P+ ++DY +Y+ G++ Sbjct: 75 ESRYPFGKYAEQAQLEIIYAHYGAYEPEAAIEAANRFIRLHPQHPSIDYAFYMKGLAAYS 134 Query: 141 -----------YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 ++ RD + + A Q ++R E S Y AR + RN L Sbjct: 135 GNSNIFSRFLPTSESSRDTKHIEEAFTEFAQLLARFPE----SEYGADARARMVHLRNLL 190 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A E+++ YY +RG Y+AA+ R + V+ NY + +A+A + Y+ L + + A+ Sbjct: 191 ARHEIDVANYYFRRGAYLAAVNRGRYVIENYQGSTAMADALAVMAHGYLLLDMPELAQTS 250 Query: 250 VSLIQERYP 258 + ++ YP Sbjct: 251 IDTLKVNYP 259 >gi|304387999|ref|ZP_07370171.1| competence lipoprotein ComL [Neisseria meningitidis ATCC 13091] gi|304337998|gb|EFM04136.1| competence lipoprotein ComL [Neisseria meningitidis ATCC 13091] Length = 267 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L N+++A + + FP + AR+S L +A+ Y + +A + E Sbjct: 37 KLYAEAQDELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIE 96 Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168 + +P+ N+DY YL G+ S+ + + D +A + Q + +V+R Sbjct: 97 RFRRLHPQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQR 156 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A + + L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE Sbjct: 157 FPNSKYAADATARMIKLVDALGGNEMSVARYYMKRGAYIAATNRAQKIIGSYQNTRYVEE 216 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 ++A L AY L A + +++ +P+ Sbjct: 217 SLAILELAYQKLGKPQLAADTRRVLETNFPKS 248 >gi|332184382|gb|AEE26636.1| Competence protein [Francisella cf. novicida 3523] Length = 274 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 10/211 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA ++ + + A + +PF +A K ++ +V Y + A +LG++ Sbjct: 40 IYAKAHEQMRNEKYFDAIRSYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQ 99 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDV-----PYD---QRATKLMLQYMS--RIVERY 169 +I YP S YVYY++G+ + R + PYD T Y + R ++ Sbjct: 100 FIKMYPYSIYKGYVYYMIGVVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFERAIQLD 159 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 N +V A+ + N +A +I +Y KRG Y AAI R V+ NY + E+A Sbjct: 160 PNGSFVPDAKRRMVFINNTIARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDA 219 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + AY L L D+A+ + ++++ YP+ Sbjct: 220 LVLTIRAYNKLGLYDQAKANIRVLKKNYPKN 250 >gi|163856157|ref|YP_001630454.1| competence lipoprotein precursor [Bordetella petrii DSM 12804] gi|163259885|emb|CAP42186.1| competence lipoprotein precursor [Bordetella petrii] Length = 303 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 17/227 (7%) Query: 50 SVTDVRYQR-------EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S TD +Y + ++Y A +++A E +PF A+++L+ A+ Sbjct: 56 SGTDTKYDKTAGWSAEQLYADAKAETAAGAWNEARERLTAIESRYPFGVYAQQALIDLAY 115 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS--------YAQMIRDVPYDQRA 154 V + G+ +QA + + + YP DY+ YL G+ + + P ++ Sbjct: 116 VNWKDGENEQALAAIDRFQQMYPNHPGTDYMLYLKGLINFTPASAFMSNLTGQDPAERDP 175 Query: 155 TKLMLQY--MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 L Y + +++RY +S Y A VT N +A EV + RYY +RG YVAA R Sbjct: 176 KGLRASYDAFNELIKRYPSSKYTPDAEKRVTWLVNAIAMNEVYVARYYYERGAYVAAANR 235 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Q V+ ++ AEEA+ + +Y L + D + +++ YP Sbjct: 236 AQTVITDFEGVPAAEEALVIMAASYDKLGMTDLKNDAERVLKTNYPD 282 >gi|223042000|ref|ZP_03612183.1| putative lipoprotein [Actinobacillus minor 202] gi|240949470|ref|ZP_04753810.1| putative lipoprotein [Actinobacillus minor NM305] gi|223017198|gb|EEF15627.1| putative lipoprotein [Actinobacillus minor 202] gi|240296043|gb|EER46704.1| putative lipoprotein [Actinobacillus minor NM305] Length = 260 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 122/245 (49%), Gaps = 17/245 (6%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 KF +A +VG +++++ S D+ Y K +L++ +++ A Y Sbjct: 3 KFTSLASLILAGLLVVGCSSNANKELEEASAQDL------YSKGQTYLQDGDYNSAIRYL 56 Query: 81 NQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 + ++ + ++ L + QY G+Y +A + E ++ YP S +DYV+YL + Sbjct: 57 DAVGTKGGQQSQFGEQTQLSLIYAQYKIGEYYKALDIAERFVRAYPNSPQMDYVFYLAAL 116 Query: 140 SYAQM----IRD---VPYDQRATKLMLQ---YMSRIVERYTNSPYVKGARFYVTVGRNQL 189 S A++ I+D V R+T + IV+ + NS YV A+ ++ +N+L Sbjct: 117 SNARLGDNFIQDFFGVNRSSRSTDSVRNAYGSFQTIVKEFPNSKYVPEAQQWMVYLKNRL 176 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A E++I ++Y +R YVA R + ++ Y D++ EA+ + +A+ + L D A +V Sbjct: 177 AEHELQIVKFYDEREAYVAVANRVEEMMNFYPDSKPTLEALPYMQKAFEKMGLNDSAEKV 236 Query: 250 VSLIQ 254 S+I+ Sbjct: 237 ASIIE 241 >gi|298368342|ref|ZP_06979660.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str. F0314] gi|298282345|gb|EFI23832.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str. F0314] Length = 267 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 10/210 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L N+++A + + FP A++S L +A+ Y + ++A + E Sbjct: 37 KLYAEAQDELNSNNYTRAIKLYELLESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIE 96 Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168 + +P+ N+DY YL G+ S+ + + D +A + Q S++V+ Sbjct: 97 RFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQDWSDRDPKANRDAYQAFSQLVQL 156 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A +T + L E+ I RYY+KRG Y+AAI R Q ++ Y + + EE Sbjct: 157 YPNSKYAPDATERMTKLVDALGGNEIAIARYYMKRGAYLAAINRAQKIVEQYQNTRYVEE 216 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258 ++A + AY L A + ++ +P Sbjct: 217 SLAMMELAYKKLGKPQLAADSRRILAGNFP 246 >gi|254797247|ref|YP_003082089.1| putative competence protein ComL [Neorickettsia risticii str. Illinois] gi|254590495|gb|ACT69857.1| putative competence protein ComL [Neorickettsia risticii str. Illinois] Length = 227 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 6/225 (2%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 +LY F F +C L G S+ V V + + +Y AVL L+++N+ A Sbjct: 4 KLYNFLFVCF----LCVLSGCGVGKSKKVLNSKVRED--ELSMYSSAVLSLEKKNYKAAK 57 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E F + + PF+ + K+ + Y GK+ AA E Y+ YP+ + VD V + Sbjct: 58 ELFEKVADIAPFSSIGEKAKASYTKILYDEGKFAAAAGSAEGYLLNYPDGEKVDQVLNIK 117 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 G +Y QM + + +++ + S YV A+ + +A K IG Sbjct: 118 GNAYFQMSKGRTNSGEFADKARDAFTVLIQTFPASEYVTDAQKKLLEIDEIMAEKIFSIG 177 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 +Y K Y AAI RF +L +YS + + A+++ +EAY L + Sbjct: 178 SFYFKEMNYHAAIARFDELLRDYSRTKLYDAALSKRLEAYKMLGV 222 >gi|171059557|ref|YP_001791906.1| putative transmembrane protein [Leptothrix cholodnii SP-6] gi|170777002|gb|ACB35141.1| putative transmembrane protein [Leptothrix cholodnii SP-6] Length = 284 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 10/181 (5%) Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS--------YAQ 143 +A+++ L AF+ Y + Q+ ++ E ++ +P S DY YYL G+ + Sbjct: 93 LAQQAQLERAFLHYKMQEKAQSLAIIERFLKLHPTSPAADYAYYLQGLINFNDDLGLFGS 152 Query: 144 MIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +++ DQ+A++ Q ++V+RY +S Y AR + N LAA EV + RYY Sbjct: 153 IVKTDLAERDQQASRDAYQSFKQLVDRYPDSRYAPDARLRINYIINALAAHEVHVARYYY 212 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +RG YVA+ R Q + ++ AEEA+ + +Y L + + ++Q YP+ Sbjct: 213 QRGAYVASANRAQQAVQDFRGVPAAEEALYLMAASYHQLGMAPLRDDAWRVLQNNYPKSR 272 Query: 262 W 262 W Sbjct: 273 W 273 >gi|309378793|emb|CBX22619.1| competence lipoprotein ComL [Neisseria lactamica Y92-1009] Length = 268 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 13/251 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K L + S+A+C + +D V ++Y +A L N+++A + Sbjct: 1 MKKILLMVSLSLALCACASSQGTVDKDTQTTQGWGVE---KLYAEAQDELGGGNYTRAVK 57 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + FP A+++LL +A+ Y + +A + + + YP+ N+DY YL G Sbjct: 58 LYEILGSRFPTGRYAQQALLDTAYAYYKDDEKDKALAAIDRFRNLYPQHPNMDYALYLRG 117 Query: 139 M-------SYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + S+ + + D +A + Q + +V R+ +S Y A + + Sbjct: 118 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVRRFPDSKYAADASARMIKLVDA 177 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A + Sbjct: 178 LGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 237 Query: 249 VVSLIQERYPQ 259 +++ +P+ Sbjct: 238 TRRVLETNFPK 248 >gi|121634500|ref|YP_974745.1| competence lipoprotein [Neisseria meningitidis FAM18] gi|218767825|ref|YP_002342337.1| competence lipoprotein [Neisseria meningitidis Z2491] gi|254804586|ref|YP_003082807.1| DNA uptake lipoprotein [Neisseria meningitidis alpha14] gi|18203141|sp|Q9JVB7|COML_NEIMA RecName: Full=Competence lipoprotein ComL; Flags: Precursor gi|120866206|emb|CAM09946.1| competence lipoprotein [Neisseria meningitidis FAM18] gi|121051833|emb|CAM08139.1| competence lipoprotein [Neisseria meningitidis Z2491] gi|254668129|emb|CBA04725.1| DNA uptake lipoprotein [Neisseria meningitidis alpha14] gi|254670507|emb|CBA06261.1| competence lipoprotein ComL [Neisseria meningitidis alpha153] gi|261392925|emb|CAX50510.1| competence lipoprotein ComL [Neisseria meningitidis 8013] gi|308388891|gb|ADO31211.1| competence lipoprotein [Neisseria meningitidis alpha710] gi|319410075|emb|CBY90409.1| competence lipoprotein ComL [Neisseria meningitidis WUE 2594] gi|325131844|gb|EGC54544.1| competence lipoprotein comL [Neisseria meningitidis M6190] gi|325136075|gb|EGC58685.1| competence lipoprotein comL [Neisseria meningitidis M0579] gi|325137894|gb|EGC60469.1| competence lipoprotein comL [Neisseria meningitidis ES14902] gi|325139919|gb|EGC62449.1| competence lipoprotein comL [Neisseria meningitidis CU385] gi|325141925|gb|EGC64365.1| competence lipoprotein comL [Neisseria meningitidis 961-5945] gi|325197922|gb|ADY93378.1| competence lipoprotein comL [Neisseria meningitidis G2136] gi|325202502|gb|ADY97956.1| competence lipoprotein comL [Neisseria meningitidis M01-240149] gi|325207747|gb|ADZ03199.1| competence lipoprotein comL [Neisseria meningitidis NZ-05/33] Length = 267 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L N+++A + + FP + AR+S L +A+ Y + +A + E Sbjct: 37 KLYAEAQDELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIE 96 Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168 + +P+ N+DY YL G+ S+ + + D +A + Q + +V+R Sbjct: 97 RFRRLHPQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQR 156 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A + + L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE Sbjct: 157 FPNSKYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEE 216 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 ++A L AY L A + +++ +P+ Sbjct: 217 SLAILELAYQKLGKPQLAADTRRVLETNFPKS 248 >gi|170723709|ref|YP_001751397.1| competence lipoprotein ComL [Pseudomonas putida W619] gi|169761712|gb|ACA75028.1| competence lipoprotein ComL [Pseudomonas putida W619] Length = 339 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 10/210 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y++A L +++ A +PF A ++ L + Y + + A S E Sbjct: 33 ELYQQAQADLDNSSYNSAVNKLKALESRYPFGRYADQAQLELIYANYKNSEPEAAKSAAE 92 Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR-----ATKLMLQYMSRIVER 168 +I +P+ NVDY YYL G+ S+ Q + R +P D A + +++ R Sbjct: 93 RFIRLHPQHPNVDYAYYLKGLTSFDQDRGLVARFLPLDMTKRDPGAARDSYNEFAQLTSR 152 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A+ + RN LA+ E+ + YYL R YVAA R + V+ N+ + + Sbjct: 153 FPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLSRQAYVAAANRGRYVVENFQETPSVGD 212 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258 +A +VEAY + L D A + ++ YP Sbjct: 213 GLAVMVEAYQKMHLDDLAATSLETLKLNYP 242 >gi|74316827|ref|YP_314567.1| putative competence lipoprotein [Thiobacillus denitrificans ATCC 25259] gi|74056322|gb|AAZ96762.1| putative competence lipoprotein precursor [Thiobacillus denitrificans ATCC 25259] Length = 281 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/220 (30%), Positives = 101/220 (45%), Gaps = 19/220 (8%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +++Y +A L E N+ +A + F +PF A+++ L A+ Y + A + Sbjct: 52 QKLYAEAKDNLNEGNYERAVKLFETLESRYPFGRYAQQAQLEVAYAYYKDNEPISAVAAC 111 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY------------DQRATKLMLQYMSRI 165 + +I +P NVDY YYL G+ A D+ D RA + + Sbjct: 112 DRFIKLHPNHPNVDYAYYLKGL--ANFNDDLGLLGNLVDQDMSERDPRAARDAFLAFKEL 169 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 R+ S Y A + N LA EV + +YYLKR YVAA R + VL Y +A Sbjct: 170 ATRFPQSIYAADATARMKYLVNALANNEVHVAKYYLKRKAYVAAANRAKEVLKTYPEAPA 229 Query: 226 AEEAMARLVEAYVALA---LMDEAREVVSL--IQERYPQG 260 EEA+A + +Y L L D+AR V++L +Y QG Sbjct: 230 LEEALAIMALSYDRLKLPELRDDARRVLTLNFPNSKYLQG 269 >gi|297182617|gb|ADI18776.1| DNA uptake lipoprotein [uncultured gamma proteobacterium HF4000_36I10] Length = 310 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/213 (26%), Positives = 109/213 (51%), Gaps = 10/213 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++++Y +A L+ N+S A + FPF A ++ L + Y + + + A + Sbjct: 31 EKQIYNQAQEHLENGNYSLAVKNLQLLESRFPFGPYAEQAQLEIIYAHYRSLEPEAAIAA 90 Query: 117 GEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYD--QRATKLMLQYMS---RIV 166 + +I +P+ +VDY YY+ G+ +Y + + R P D QR +Q +++ Sbjct: 91 ADRFIRLHPQHPSVDYAYYMRGLANYTEGQGLLERFFPTDMSQRDPGAAVQAFEDFRQLL 150 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 +R+ +S Y AR + RN+LA E+ + YY KR Y+AA R + V+ N Sbjct: 151 QRFPDSQYAPDARARMIHLRNRLARYEINVANYYFKRKAYLAAANRGRYVVENMPQTSAV 210 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +A+A +V+AY+ L + D A +++++ +P+ Sbjct: 211 PDALAVMVQAYLLLGMDDLADRSLTVLRSNFPK 243 >gi|254673629|emb|CBA09175.1| competence lipoprotein ComL [Neisseria meningitidis alpha275] Length = 267 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L N+++A + + FP + AR+S L +A+ Y + +A + E Sbjct: 37 KLYAEAQDELNSSNYTRAVKLYEILESRFPTSLHARQSQLDTAYAYYKDDEKDKALAAIE 96 Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168 + +P+ N+DY YL G+ S+ + + D +A + Q + +V+R Sbjct: 97 RFRRLHPQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQR 156 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A + + L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE Sbjct: 157 FPNSKYAADATVRMVKLVDALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEE 216 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 ++A L AY L A + +++ +P+ Sbjct: 217 SLAILELAYQKLGKPQLAADTRRVLETNFPKS 248 >gi|325129837|gb|EGC52644.1| competence lipoprotein comL [Neisseria meningitidis OX99.30304] Length = 256 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L N+++A + + FP + AR+S L +A+ Y + +A + E Sbjct: 26 KLYAEAQDELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIE 85 Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168 + +P+ N+DY YL G+ S+ + + D +A + Q + +V+R Sbjct: 86 RFRRLHPQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQR 145 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A + + L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE Sbjct: 146 FPNSKYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEE 205 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 ++A L AY L A + +++ +P+ Sbjct: 206 SLAILELAYQKLGKPQLAADTRRVLETNFPKS 237 >gi|238921073|ref|YP_002934588.1| outer membrane protein assembly complex subunit YfiO [Edwardsiella ictaluri 93-146] gi|238870642|gb|ACR70353.1| competence lipoprotein ComL [Edwardsiella ictaluri 93-146] Length = 245 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 30/245 (12%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A T+ ++A C SS++ D+ E+Y A L++ NF A Sbjct: 10 ATTLSLALAGC-------SSSKEAVPDNPP-----AEIYATAQQKLQDGNFKAAITQLEA 57 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +PF +++ L + Y + A + + +I P S+N+ YV Y+ G++ Sbjct: 58 LDNRYPFGPYSQQVQLDLIYAYYKSADLPMAQATIDRFIRLNPTSQNMSYVLYMRGLTDM 117 Query: 143 QMI--------------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 M RD Y ++A + S++V+RY NS Y A + +N+ Sbjct: 118 AMDDSALQGFFGIDRSDRDPEYARQA----FRDFSQLVQRYPNSAYTTDATKRLVFLKNR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + R+Y KRG YVA + R + +L NY D + A+ + AY + L EA + Sbjct: 174 LAKHELAVARFYTKRGAYVAVVNRVEQMLRNYPDTQATRGALPLMENAYRQMGLNGEADK 233 Query: 249 VVSLI 253 V +I Sbjct: 234 VQKII 238 >gi|313668817|ref|YP_004049101.1| competence lipoprotein [Neisseria lactamica ST-640] gi|313006279|emb|CBN87742.1| competence lipoprotein [Neisseria lactamica 020-06] Length = 268 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 13/251 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K L + S+A+C + +D V ++Y +A L N+++A + Sbjct: 1 MKKILLMVSLSLALCACASSQGTVDKDTQTTQGWGVE---KLYAEAQDELGGGNYTRAVK 57 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + FP A+++LL +A+ Y + +A + + + YP+ N+DY YL G Sbjct: 58 LYEILGSRFPTGRYAQQALLDTAYAYYKDDEKDKALAAIDRFRNLYPQHPNMDYALYLRG 117 Query: 139 M-------SYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + S+ + + D +A + Q + +V R+ +S Y A + + Sbjct: 118 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVRRFPDSKYAADASARMIKLVDA 177 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A + Sbjct: 178 LGGNEMAVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 237 Query: 249 VVSLIQERYPQ 259 +++ +P+ Sbjct: 238 TRRVLETNFPK 248 >gi|319638103|ref|ZP_07992867.1| competence lipoprotein comL [Neisseria mucosa C102] gi|317400748|gb|EFV81405.1| competence lipoprotein comL [Neisseria mucosa C102] Length = 267 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 10/212 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L N+++A + + FP A++S L +A+ Y + ++A + Sbjct: 37 KLYAEAQDELNSNNYTRAVKLYEILESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIA 96 Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168 + +P+ N+DY YL G+ S+ + + D +A + Q + +V+R Sbjct: 97 RFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQDWSDRDPKANRDAYQAFAELVQR 156 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + + L E+ + RYY+KRG YVAA R Q +++ Y + + EE Sbjct: 157 YPNSKYAADATERMAKLVDALGGNEMSVARYYMKRGAYVAAANRAQKIVSRYQNTRYVEE 216 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 A+A + AY L A + +++ +PQ Sbjct: 217 ALAMMELAYKKLDKPQLAADTHRVLETNFPQS 248 >gi|261400384|ref|ZP_05986509.1| competence lipoprotein ComL [Neisseria lactamica ATCC 23970] gi|269209821|gb|EEZ76276.1| competence lipoprotein ComL [Neisseria lactamica ATCC 23970] Length = 268 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 13/251 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K L + S+A+C + +D V ++Y +A L N+++A + Sbjct: 1 MKKILLMVSLSLALCACASSQGTVDKDTQTTQGWGVE---KLYAEAQDELGGGNYTRAVK 57 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + FP A+++LL +A+ Y + +A + + + YP+ N+DY YL G Sbjct: 58 LYEILGSRFPTGRYAQQALLDTAYAYYKDDEKDKALAAIDRFRNLYPQHPNMDYALYLRG 117 Query: 139 M-------SYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + S+ + + D +A + Q + +V R+ +S Y A + + Sbjct: 118 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVRRFPDSKYAADASARMIKLVDA 177 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A + Sbjct: 178 LGGNEMAVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 237 Query: 249 VVSLIQERYPQ 259 +++ +P+ Sbjct: 238 TRRVLETNFPK 248 >gi|261380319|ref|ZP_05984892.1| competence lipoprotein ComL [Neisseria subflava NJ9703] gi|284796837|gb|EFC52184.1| competence lipoprotein ComL [Neisseria subflava NJ9703] Length = 267 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 10/212 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L N+++A + + FP A++S L +A+ Y + ++A + Sbjct: 37 KLYAEAQDELNSNNYTRAVKLYEILESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIA 96 Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168 + +P+ N+DY YL G+ S+ + + D +A + Q + +V+R Sbjct: 97 RFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQDWSDRDPKANRDAYQAFAELVQR 156 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + + L E+ + RYY+KRG YVAA R Q +++ Y + + EE Sbjct: 157 YPNSKYAADATERMAKLVDALGGNEMSVARYYMKRGAYVAAANRAQKIVSRYQNTRYVEE 216 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 A+A + AY L A + +++ +PQ Sbjct: 217 ALAMMELAYKKLDKPQLAADTRRVLETNFPQS 248 >gi|45403|emb|CAA78141.1| putative protein of no known function [Pseudomonas aeruginosa PAO1] Length = 341 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 10/222 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 ++V + + ++Y++A L ++++ A +PF A ++ L + Y Sbjct: 23 ETVDENLSESQLYQQAQDDLNNKSYNSAVTKLKALESRYPFGRYAEQAQLELIYANYKNM 82 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-----AQMIRDVPYDQR-----ATKLM 158 + + A + E +I +P+ NVDY YYL G+S + R +P D A + Sbjct: 83 EPEAARAAAERFIRLHPQHPNVDYAYYLKGLSSFDQDRGLLARFLPLDMTKRDPGAARDS 142 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 +++ R NS Y A+ + RN LAA EV +G YYLKR YVAA R + V+ Sbjct: 143 FNEFAQLTSRLPNSRYAPDAKARMVYLRNLLAAYEVHVGHYYLKRQAYVAAANRGRYVVE 202 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 N+ + + +A +VEAY L L D A + ++ YP Sbjct: 203 NFQETPAVGDGLAIMVEAYRRLGLDDLASTSLETLKLNYPDN 244 >gi|115314565|ref|YP_763288.1| hypothetical protein FTH_0702 [Francisella tularensis subsp. holarctica OSU18] gi|115129464|gb|ABI82651.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica OSU18] Length = 274 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 10/211 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA ++ Q + A + +PF +A K ++ +V Y + A +LG++ Sbjct: 40 IYAKAHEQMQNQKYFDAIRSYKSLVAQYPFTSLAEKGMVDLIYVYYMDDESTMALALGQQ 99 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDV-----PYD---QRATKLMLQYMS--RIVERY 169 +I YP S YVYY++G+ + R + PYD T Y + + ++ Sbjct: 100 FIKMYPYSIYKGYVYYMIGVVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLD 159 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 N +V A+ + N +A +I +Y KRG Y AAI R V+ NY + E+A Sbjct: 160 PNGSFVPDAKRRMVFINNIIARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDA 219 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + AY L L D+A+ + ++++ YP+ Sbjct: 220 LVLTIRAYNKLGLYDQAKANIRVLKKNYPKN 250 >gi|323697686|ref|ZP_08109598.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio sp. ND132] gi|323457618|gb|EGB13483.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio desulfuricans ND132] Length = 242 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/247 (25%), Positives = 110/247 (44%), Gaps = 20/247 (8%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 + + S+A C + +L D +E+YE V + E+++ A +YF++ Sbjct: 10 IVVLLSLAGCMWID-------SYFLPPPEDT--AQELYEAGVAAMDEKDYGDAQDYFSKL 60 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 FPF+ + K L + Y A +E+ +P ++N+ YV Y + + Sbjct: 61 KDRFPFSPYSLKGELALGDAYFLDEDYVHALDAYKEFEALHPSNENIPYVLYQIANTDVS 120 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 M R + Q K L+Y+ R+VE Y S Y + A+ + R LA EV + ++ + Sbjct: 121 MFRTIDRRQENVKEGLEYLYRLVETYPKSQYAEAAKEMILKSRRILAEHEVFVADFFWRT 180 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYVAL--ALMDEAREVVSLIQERYPQG 260 +Y A R+Q V+ N+SD + AM R +Y L +E RE + QG Sbjct: 181 EQYGPAWHRYQYVVENFSDIPDLRDYAMKRAEYSYFEYQKTLSEEERERI--------QG 232 Query: 261 YWARYVE 267 W +++ Sbjct: 233 SWKLWLK 239 >gi|190150448|ref|YP_001968973.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263792|ref|ZP_07545398.1| hypothetical protein appser13_12030 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915579|gb|ACE61831.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870913|gb|EFN02651.1| hypothetical protein appser13_12030 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 258 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/224 (25%), Positives = 114/224 (50%), Gaps = 14/224 (6%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +++Y K +L++ +++ A Y + + ++ L F Y G+Y +A Sbjct: 33 QDLYTKGQTYLQDGDYNSAIRYLDAIGAKGGQGTLGEQTQLSLIFANYKIGEYYKALDAA 92 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----IRDVPYDQRATKLMLQYMS------RIVE 167 E ++ YP S ++DYVYYL G+S A++ I+D RA++ + + IV+ Sbjct: 93 ERFVRAYPNSASMDYVYYLAGLSNARLGDNFIQDFFGVNRASRALDSVRNAYGSFQTIVQ 152 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y S Y + A+ ++ N++A E+ I ++Y +R YVA + R + ++ Y +++ Sbjct: 153 HYPQSQYARDAQNWMAYLINRMAEHELSIVKFYDEREAYVAVVNRVEEMMRFYPESKPTY 212 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQ----ERYPQGYWARYVE 267 +A++ + +AY + + D A +V +LI+ + +P+ Y E Sbjct: 213 QALSYMQKAYEQMGVKDSAEKVAALIEANKDKNFPEAIKPEYSE 256 >gi|152980898|ref|YP_001353082.1| competence lipoprotein ComL [Janthinobacterium sp. Marseille] gi|151280975|gb|ABR89385.1| competence lipoprotein ComL [Janthinobacterium sp. Marseille] Length = 261 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 10/216 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A + +++KA +F + +PF A+++ + A+ Y G QA + E Sbjct: 33 KLYSEAREEMNVGDYAKAVSHFEKLESRYPFGTYAQQAQMEIAYAYYRQGDQPQALAAVE 92 Query: 119 EYITQYPESKNVDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +I +P+ NVDY+YYL G+ + D +A + + ER Sbjct: 93 RFIKLHPDHPNVDYMYYLRGLINFNDKVSIFDFVSRQDPTERDPKAAREAFDSFKLLTER 152 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + +S Y A + N +A +V + YY +RG Y+AA+ R Q + NY A E Sbjct: 153 FPDSKYTPDATARLAYLVNGMAQYDVHVANYYYRRGAYLAAVNRAQSAVKNYPGAPAVEG 212 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 A+ ++ +Y AL L + +++ +P + R Sbjct: 213 ALYVMIRSYDALNLPQLRDDAERVMKTNFPDSVYFR 248 >gi|301629104|ref|XP_002943688.1| PREDICTED: hypothetical protein LOC100490343 [Xenopus (Silurana) tropicalis] Length = 475 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 16/254 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + L +F ++ L+ +S D + D ++Y +A + + KA Sbjct: 211 MLRAPLPLFSALLAAGLIAGCASTSEDKTANWSPD-----KIYSEAREEMNSGAYDKAVP 265 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + +A+++ L A+ Q+ G+ QA + E ++ +P S +DY YL G Sbjct: 266 LLEKLEGRAAGTPLAQQAQLDKAYAQFKNGEKAQAIATLERFLKLHPASPAIDYALYLRG 325 Query: 139 M----------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + S+ DQ+A K + + R+ +S Y AR +T N Sbjct: 326 LVNFNDNLGIFSWLSRQDLSERDQKAAKDSFESFRDLTTRFPDSRYAPDARQRMTYIVNA 385 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA EV + RYY +RG YVAA+ R Q +++Y + AEEA+ L+ +Y AL + + Sbjct: 386 LAQYEVHVARYYYERGAYVAAVGRAQQAISDYQNVPAAEEALYILIRSYDALGMAQLRDD 445 Query: 249 VVSLIQERYPQ-GY 261 + ++ YP+ GY Sbjct: 446 TMRVMNASYPESGY 459 >gi|212212776|ref|YP_002303712.1| lipoprotein, ComL family [Coxiella burnetii CbuG_Q212] gi|212011186|gb|ACJ18567.1| lipoprotein, ComL family [Coxiella burnetii CbuG_Q212] Length = 272 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 10/216 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E++ L ++++S+A + F +PF A ++ L + Y A + + Sbjct: 52 ELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQLDIIYAYYKNNDTSSAIAAAD 111 Query: 119 EYITQYPESKNVDYVYYL-------VGMSYAQ-MIRDVPYDQRATKLMLQYMS--RIVER 168 YI YP +NVDY YY+ +G+S+ Q + R P + + L + S + E Sbjct: 112 RYIWLYPRGRNVDYAYYMRGVIGFDLGLSWLQKLARVSPVSRDISTLQQSFTSFATLAEV 171 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + +S Y A + RN +A +E+ I +Y+KR YVAA R V+ ++ + + Sbjct: 172 FPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVAAANRGSYVVQHFQGSPQVAK 231 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 A+A +V+AY AL L A L+Q YP AR Sbjct: 232 ALAIMVQAYRALGLPKMADVSNHLLQTNYPHTLEAR 267 >gi|56708306|ref|YP_170202.1| lipoprotein [Francisella tularensis subsp. tularensis SCHU S4] gi|89256089|ref|YP_513451.1| lipoprotein [Francisella tularensis subsp. holarctica LVS] gi|110670777|ref|YP_667334.1| lipoprotein [Francisella tularensis subsp. tularensis FSC198] gi|118497848|ref|YP_898898.1| competence lipoprotein ComL [Francisella tularensis subsp. novicida U112] gi|167010774|ref|ZP_02275705.1| competence lipoprotein ComL [Francisella tularensis subsp. holarctica FSC200] gi|169656566|ref|YP_001428171.2| lipoprotein [Francisella tularensis subsp. holarctica FTNF002-00] gi|187931811|ref|YP_001891796.1| competence lipoprotein ComL [Francisella tularensis subsp. mediasiatica FSC147] gi|224457426|ref|ZP_03665899.1| competence lipoprotein ComL [Francisella tularensis subsp. tularensis MA00-2987] gi|254367417|ref|ZP_04983443.1| conserved hypothetical lipoprotein [Francisella tularensis subsp. holarctica 257] gi|254369096|ref|ZP_04985108.1| hypothetical protein FTAG_00025 [Francisella tularensis subsp. holarctica FSC022] gi|254370789|ref|ZP_04986794.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254373203|ref|ZP_04988692.1| conserved hypothetical protein [Francisella tularensis subsp. novicida GA99-3549] gi|254374658|ref|ZP_04990139.1| conserved hypothetical protein [Francisella novicida GA99-3548] gi|254875127|ref|ZP_05247837.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|290954526|ref|ZP_06559147.1| competence lipoprotein ComL [Francisella tularensis subsp. holarctica URFT1] gi|295312042|ref|ZP_06802857.1| competence lipoprotein ComL [Francisella tularensis subsp. holarctica URFT1] gi|56604798|emb|CAG45877.1| conserved hypothetical lipoprotein [Francisella tularensis subsp. tularensis SCHU S4] gi|89143920|emb|CAJ79139.1| conserved hypothetical lipoprotein [Francisella tularensis subsp. holarctica LVS] gi|110321110|emb|CAL09260.1| conserved hypothetical lipoprotein [Francisella tularensis subsp. tularensis FSC198] gi|118423754|gb|ABK90144.1| competence lipoprotein ComL [Francisella novicida U112] gi|134253233|gb|EBA52327.1| conserved hypothetical lipoprotein [Francisella tularensis subsp. holarctica 257] gi|151569032|gb|EDN34686.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|151570930|gb|EDN36584.1| conserved hypothetical protein [Francisella novicida GA99-3549] gi|151572377|gb|EDN38031.1| conserved hypothetical protein [Francisella novicida GA99-3548] gi|157122046|gb|EDO66186.1| hypothetical protein FTAG_00025 [Francisella tularensis subsp. holarctica FSC022] gi|164551634|gb|ABU61215.2| lipoprotein with TPR domain [Francisella tularensis subsp. holarctica FTNF002-00] gi|187712720|gb|ACD31017.1| competence lipoprotein ComL [Francisella tularensis subsp. mediasiatica FSC147] gi|254841126|gb|EET19562.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282159537|gb|ADA78928.1| lipoprotein with TPR domain [Francisella tularensis subsp. tularensis NE061598] gi|332678563|gb|AEE87692.1| Putative component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Francisella cf. novicida Fx1] Length = 274 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 10/211 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA ++ Q + A + +PF +A K ++ +V Y + A +LG++ Sbjct: 40 IYAKAHEQMQNQKYFDAIRSYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQ 99 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDV-----PYD---QRATKLMLQYMS--RIVERY 169 +I YP S YVYY++G+ + R + PYD T Y + + ++ Sbjct: 100 FIKMYPYSIYKGYVYYMIGVVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLD 159 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 N +V A+ + N +A +I +Y KRG Y AAI R V+ NY + E+A Sbjct: 160 PNGSFVPDAKRRMVFINNIIARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDA 219 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + AY L L D+A+ + ++++ YP+ Sbjct: 220 LVLTIRAYNKLGLYDQAKANIRVLKKNYPKN 250 >gi|307824792|ref|ZP_07655015.1| outer membrane assembly lipoprotein YfiO [Methylobacter tundripaludum SV96] gi|307734150|gb|EFO05004.1| outer membrane assembly lipoprotein YfiO [Methylobacter tundripaludum SV96] Length = 279 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 10/203 (4%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 L N+ KA + + +PF + ++ L A+ Y + A + + +I P S Sbjct: 54 LDAGNYDKAIKLYEALESRYPFGDESAQTQLDIAYAYYKNSDPEAAIAAADRFIKINPRS 113 Query: 128 KNVDYVYYLVGM-SYAQMI----RDVPYD--QR---ATKLMLQYMSRIVERYTNSPYVKG 177 +VDY YYL G+ +Y + I R +P D QR + + + R+ NS Y+ Sbjct: 114 SSVDYAYYLKGLVNYNRGIGFIDRFLPTDTSQRDPGTARDAYDNFAELTRRFPNSKYIAD 173 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A+ + +N LA EV + R+Y+KR YVAAI R V+ Y A+ + EAY Sbjct: 174 AQQRMIELKNNLAMYEVHVARFYMKRKAYVAAINRASTVVDKYQRTPAVPYALQIMQEAY 233 Query: 238 VALALMDEAREVVSLIQERYPQG 260 L L D A++ + + YP G Sbjct: 234 TKLELPDLAKDTTRVYELNYPNG 256 >gi|221067307|ref|ZP_03543412.1| outer membrane assembly lipoprotein YfiO [Comamonas testosteroni KF-1] gi|220712330|gb|EED67698.1| outer membrane assembly lipoprotein YfiO [Comamonas testosteroni KF-1] Length = 271 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 91/191 (47%), Gaps = 13/191 (6%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 + KA F + +A+++ L A+ QY AG+ QA + + + +P S +DY Sbjct: 58 YDKAVPLFEKLEGRAAGTPLAQQAQLEKAYAQYKAGEKVQALATLDRFTKLHPASPAMDY 117 Query: 133 VYYLVGM--------SYAQMIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 YL G+ + + R DQ+A K + +V R+ +S Y AR + Sbjct: 118 ALYLKGLVNFNDNLGMFGWLTRQDLSERDQKAAKDSFESFRELVTRFPDSKYSDDARQRM 177 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA- 241 N LA EV + RYY RG YVAAI R Q + +Y + EAM LV++Y AL Sbjct: 178 QYIVNSLAQYEVHVARYYYSRGAYVAAIARAQTAIKDYQNVPSVREAMVILVKSYDALGM 237 Query: 242 --LMDEAREVV 250 L D+A+ V+ Sbjct: 238 TQLRDDAKRVL 248 >gi|330811804|ref|YP_004356266.1| DNA uptake lipoprotein (ComL) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379912|gb|AEA71262.1| Putative DNA uptake lipoprotein (ComL) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 338 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 14/227 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS++V +++++V E+Y++A L +++ A +PF A ++ L Sbjct: 19 SSKEVVDENLSEV----ELYQQAQNDLDNNSYTSATAKLKALESRYPFGRYADQAQLELI 74 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153 + Y + + A S E +I +P+ NVDY YYL G+ S+ Q + R +P D Sbjct: 75 YANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDVGLLARFLPLDMTKRD 134 Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 135 PGAARDSYNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAAN 194 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 R + V+ N+ + + +A + EAY L L + A + ++ YP Sbjct: 195 RGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELAATSLETLKLNYP 241 >gi|194323821|ref|ZP_03057597.1| tetratricopeptide repeat domain protein [Francisella tularensis subsp. novicida FTE] gi|208779912|ref|ZP_03247256.1| tetratricopeptide repeat domain protein [Francisella novicida FTG] gi|194322185|gb|EDX19667.1| tetratricopeptide repeat domain protein [Francisella tularensis subsp. novicida FTE] gi|208744367|gb|EDZ90667.1| tetratricopeptide repeat domain protein [Francisella novicida FTG] Length = 262 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 10/211 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA ++ Q + A + +PF +A K ++ +V Y + A +LG++ Sbjct: 28 IYAKAHEQMQNQKYFDAIRSYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQ 87 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDV-----PYD---QRATKLMLQYMS--RIVERY 169 +I YP S YVYY++G+ + R + PYD T Y + + ++ Sbjct: 88 FIKMYPYSIYKGYVYYMIGVVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLD 147 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 N +V A+ + N +A +I +Y KRG Y AAI R V+ NY + E+A Sbjct: 148 PNGSFVPDAKRRMVFINNIIARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDA 207 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + AY L L D+A+ + ++++ YP+ Sbjct: 208 LVLTIRAYNKLGLYDQAKANIRVLKKNYPKN 238 >gi|220933993|ref|YP_002512892.1| putative competence lipoprotein precursor [Thioalkalivibrio sp. HL-EbGR7] gi|219995303|gb|ACL71905.1| putative competence lipoprotein precursor [Thioalkalivibrio sp. HL-EbGR7] Length = 254 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 10/211 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L NF +A Y+ FPF+ A+++ L A+ + A + + A + + Sbjct: 36 QLYTEARAALDRGNFDQAVSYYESLEARFPFSRFAQQAQLEVAYAYHKADEPEMALAAAD 95 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQ-----MIRDVPYDQRAT-----KLMLQYMSRIVER 168 +I P VDY YYL G+ A + R P D + + S +V Sbjct: 96 RFIQINPRHPYVDYAYYLKGLVNANRGQGYLQRWFPRDPSSRNPAHLRQAFDDFSTLVGN 155 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + +S Y + A + RN LAA E+ + +Y++RG ++AA R + V+ Y +A+ + Sbjct: 156 FPDSRYAEDAHQRLIYLRNMLAAHELHVANFYMRRGAWLAAAQRARTVIERYPEADSNLD 215 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259 A+ +V AY L L D A + + ++ P+ Sbjct: 216 ALEVMVRAYRELELNDLANDALRVLTLNDPE 246 >gi|77461058|ref|YP_350565.1| competence lipoprotein ComL, putative [Pseudomonas fluorescens Pf0-1] gi|77385061|gb|ABA76574.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1] Length = 338 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 14/228 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS++V +++++ E+Y++A L +++ A +PF A ++ L Sbjct: 19 SSKEVVDENLSEA----ELYQQAQQDLDNNSYTSATAKLKALESRYPFGRYADQAQLELI 74 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153 + Y + + A S E +I +P+ NVDY YYL G+ S+ Q + R +P D Sbjct: 75 YANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDVGLLARFLPLDMTKRD 134 Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 A + +++ RY NS Y A+ + RN LAA E+ + YYL R YVAA Sbjct: 135 PGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLAAYEIHVADYYLTRQAYVAAAN 194 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A + EAY L L + A + ++ YP Sbjct: 195 RGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELAATSLETLKLNYPN 242 >gi|32035196|ref|ZP_00135230.1| COG4105: DNA uptake lipoprotein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208591|ref|YP_001053816.1| putative lipoprotein [Actinobacillus pleuropneumoniae L20] gi|165976547|ref|YP_001652140.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303250130|ref|ZP_07336332.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253304|ref|ZP_07339453.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246036|ref|ZP_07528118.1| hypothetical protein appser1_12390 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307248144|ref|ZP_07530172.1| hypothetical protein appser2_11250 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307250377|ref|ZP_07532325.1| hypothetical protein appser4_11570 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252759|ref|ZP_07534650.1| hypothetical protein appser6_12730 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255018|ref|ZP_07536836.1| hypothetical protein appser9_12520 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307257174|ref|ZP_07538946.1| hypothetical protein appser10_11740 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307259454|ref|ZP_07541179.1| hypothetical protein appser11_12510 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307261603|ref|ZP_07543271.1| hypothetical protein appser12_11640 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|126097383|gb|ABN74211.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165876648|gb|ABY69696.1| conserved putative lipoprotein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302647986|gb|EFL78193.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302651193|gb|EFL81347.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306852971|gb|EFM85194.1| hypothetical protein appser1_12390 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306855321|gb|EFM87496.1| hypothetical protein appser2_11250 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306857587|gb|EFM89695.1| hypothetical protein appser4_11570 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859791|gb|EFM91813.1| hypothetical protein appser6_12730 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306861891|gb|EFM93867.1| hypothetical protein appser9_12520 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306864336|gb|EFM96247.1| hypothetical protein appser10_11740 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306866390|gb|EFM98253.1| hypothetical protein appser11_12510 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868726|gb|EFN00535.1| hypothetical protein appser12_11640 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 258 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/224 (25%), Positives = 113/224 (50%), Gaps = 14/224 (6%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +++Y K +L++ +++ A Y + ++ L F Y G+Y +A Sbjct: 33 QDLYTKGQTYLQDGDYNSAIRYLDAIGAKGGQGTFGEQTQLSLIFANYKIGEYYKALDAA 92 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----IRDVPYDQRATKLMLQYMS------RIVE 167 E ++ YP S ++DYVYYL G+S A++ I+D RA++ + + IV+ Sbjct: 93 ERFVRAYPNSASMDYVYYLAGLSNARLGDNFIQDFFGVNRASRALDSVRNAYGSFQTIVQ 152 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y S Y + A+ ++ N++A E+ I ++Y +R YVA + R + ++ Y +++ Sbjct: 153 HYPQSQYARDAQNWMAYLINRMAEHELSIVKFYDEREAYVAVVNRVEEMMRFYPESKPTY 212 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQ----ERYPQGYWARYVE 267 +A++ + +AY + + D A +V +LI+ + +P+ Y E Sbjct: 213 QALSYMQKAYEQMGVKDSAEKVAALIEANKDKNFPEAIKPEYSE 256 >gi|312958893|ref|ZP_07773412.1| competence lipoprotein [Pseudomonas fluorescens WH6] gi|311286663|gb|EFQ65225.1| competence lipoprotein [Pseudomonas fluorescens WH6] Length = 341 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 21/245 (8%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 + I A C S+++V +++++V E+Y+ A L +++ A Sbjct: 9 IAILAMTAAC-------SSTKEVVDENLSEV----ELYQLAQKDLDNNSYTSATAKLKAL 57 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYA 142 +PF A ++ L + Y + + A S E +I +P+ NVDY YY+ G+ S+ Sbjct: 58 ESRYPFGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFD 117 Query: 143 Q----MIRDVPYDQR-----ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Q + R +P D A + +++ RY NS Y A+ + RN LA+ E Sbjct: 118 QDVGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYE 177 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + YYL R YVAA R + V+ N+ + + +A + EAY L L + A + + Sbjct: 178 IHVAHYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELASTSLETL 237 Query: 254 QERYP 258 + YP Sbjct: 238 KLNYP 242 >gi|148545912|ref|YP_001266014.1| DNA uptake lipoprotein-like protein [Pseudomonas putida F1] gi|148509970|gb|ABQ76830.1| DNA uptake lipoprotein-like protein [Pseudomonas putida F1] Length = 339 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 10/211 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y++A L +++ A +PF A ++ L + Y + + A S E Sbjct: 33 ELYQQAQADLDNSSYTSAVNKLKALESRYPFGRYADQAQLELIYANYKNAEPEAAKSAAE 92 Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR-----ATKLMLQYMSRIVER 168 +I +P+ NVDY YYL G+ S+ Q + R +P D A + +++ R Sbjct: 93 RFIRLHPQHPNVDYAYYLKGLTSFDQDRGLLARFLPLDMTKRDPGAARDSYNEFAQLTSR 152 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A+ + RN LA+ E+ + YYL R YVAA R + V+ N+ + + Sbjct: 153 FPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLSRQAYVAAANRGRYVVENFQETPSVGD 212 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +A +VE+Y L L + A + ++ YP Sbjct: 213 GLAVMVESYQKLHLDELAATSLETLKLNYPD 243 >gi|326576922|gb|EGE26828.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis O35E] Length = 356 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 21/221 (9%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 TD Y Y++A L + A E N +P A+++LL + QY A ++ Sbjct: 41 TDAAY----YQEASEALDKNQNRNAIEALNNIRTFYPTGQYAQQALLDLIYAQYKANDFE 96 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKLM 158 EE+I +YP S++VDY Y+ G+++ Q RDV Y +L Sbjct: 97 AVLQSTEEFIHRYPNSRSVDYALYVQGVTHMGGAPKASRLVRFDQSHRDVTY----LRLA 152 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + +++ Y +SPYV A + N A E+ R+Y+KR VAA R + V Sbjct: 153 FRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEHELAAARWYVKRDAMVAAANRAKWVFQ 212 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y + EA+A L + L L + A++ L+Q YPQ Sbjct: 213 YYPQSTGVPEAIAILAYSNQKLGLTETAKQYKHLLQINYPQ 253 >gi|326565267|gb|EGE15452.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis 12P80B1] gi|326575839|gb|EGE25762.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis CO72] Length = 356 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 21/221 (9%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 TD Y Y++A L + A E N +P A+++LL + QY A ++ Sbjct: 41 TDAAY----YQEASEALDKNQNRNAIEALNNIRTFYPTGQYAQQALLDLIYAQYKANDFE 96 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKLM 158 EE+I +YP S++VDY Y+ G+++ Q RDV Y +L Sbjct: 97 AVLQSTEEFIHRYPNSRSVDYALYVQGVTHMGGAPKASRLVRFDQSHRDVTY----LRLA 152 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + +++ Y +SPYV A + N A E+ R+Y+KR VAA R + V Sbjct: 153 FRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEHELAAARWYVKRDAMVAAANRAKWVFQ 212 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y + EA+A L + L L + A++ L+Q YPQ Sbjct: 213 YYPQSTGVPEAIAILAYSNQKLGLTETAKQYKQLLQINYPQ 253 >gi|313496997|gb|ADR58363.1| DNA uptake lipoprotein-like protein [Pseudomonas putida BIRD-1] Length = 339 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 10/211 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y++A L +++ A +PF A ++ L + Y + + A S E Sbjct: 33 ELYQQAQADLDNSSYTSAVNKLKALESRYPFGRYADQAQLELIYANYKNSEPEAAKSAAE 92 Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR-----ATKLMLQYMSRIVER 168 +I +P+ NVDY YYL G+ S+ Q + R +P D A + +++ R Sbjct: 93 RFIRLHPQHPNVDYAYYLKGLTSFDQDRGLLARFLPLDMTKRDPGAARDSYNEFAQLTSR 152 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A+ + RN LA+ E+ + YYL R YVAA R + V+ N+ + + Sbjct: 153 FPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLSRQAYVAAANRGRYVVENFQETPSVGD 212 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +A +VE+Y L L + A + ++ YP Sbjct: 213 GLAVMVESYQKLHLDELAATSLETLKLNYPD 243 >gi|326562906|gb|EGE13193.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis 46P47B1] gi|326563653|gb|EGE13905.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis 103P14B1] gi|326573261|gb|EGE23229.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis 101P30B1] Length = 356 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 21/221 (9%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 TD Y Y++A L + A E N +P A+++LL + QY A ++ Sbjct: 41 TDAAY----YQEASEALDKNQNRNAIEALNNIRTFYPTGQYAQQALLDLIYAQYKANDFE 96 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKLM 158 EE+I +YP S++VDY Y+ G+++ Q RDV Y +L Sbjct: 97 AVLQSTEEFIHRYPNSRSVDYALYVQGVTHMGGAPKASRLVRFDQSHRDVTY----LRLA 152 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + +++ Y +SPYV A + N A E+ R+Y+KR VAA R + V Sbjct: 153 FRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEHELAAARWYVKRDAMVAAANRAKWVFQ 212 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y + EA+A L + L L + A++ L+Q YPQ Sbjct: 213 YYPQSTGVPEAIAILAYSNQKLGLTETAKQYKQLLQINYPQ 253 >gi|296113273|ref|YP_003627211.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis RH4] gi|295920967|gb|ADG61318.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis RH4] gi|326570965|gb|EGE20989.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis BC7] Length = 356 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 66/221 (29%), Positives = 100/221 (45%), Gaps = 21/221 (9%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 TD Y +E E K QN A E N +P A+++LL + QY A ++ Sbjct: 41 TDAAYYQEASEA---LDKNQN-RNAIEALNNIRTFYPTGQYAQQALLDLIYAQYKANDFE 96 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKLM 158 EE+I +YP S++VDY Y+ G+++ Q RDV Y +L Sbjct: 97 AVLQSTEEFIHRYPNSRSVDYALYVQGVTHMGGAPKASRLVRFDQSHRDVTY----LRLA 152 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + +++ Y +SPYV A + N A E+ R+Y+KR VAA R + V Sbjct: 153 FRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEHELAAARWYVKRDAMVAAANRAKWVFQ 212 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y + EA+A L + L L + A++ L+Q YPQ Sbjct: 213 YYPQSTGVPEAIAILAYSNQKLGLTETAKQYKQLLQINYPQ 253 >gi|26987359|ref|NP_742784.1| competence lipoprotein ComL, putative [Pseudomonas putida KT2440] gi|24982012|gb|AAN66248.1|AE016253_3 competence lipoprotein ComL, putative [Pseudomonas putida KT2440] Length = 339 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 10/211 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y++A L +++ A +PF A ++ L + Y + + A S E Sbjct: 33 ELYQQAQADLDNSSYTSAVNKLKALESRYPFGRYADQAQLELIYANYKNSEPEAAKSAAE 92 Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR-----ATKLMLQYMSRIVER 168 +I +P+ NVDY YYL G+ S+ Q + R +P D A + +++ R Sbjct: 93 RFIRLHPQHPNVDYAYYLKGLTSFDQDRGLLARFLPLDMTKRDPGAARDSYNEFAQLTSR 152 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A+ + RN LA+ E+ + YYL R YVAA R + V+ N+ + + Sbjct: 153 FPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLSRQAYVAAANRGRYVVENFQETPSVGD 212 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +A +VE+Y L L + A + ++ YP Sbjct: 213 GLAVMVESYQKLHLDELAATSLETLKLNYPD 243 >gi|332530534|ref|ZP_08406473.1| putative transmembrane protein [Hylemonella gracilis ATCC 19624] gi|332040009|gb|EGI76396.1| putative transmembrane protein [Hylemonella gracilis ATCC 19624] Length = 276 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 13/216 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D T E+ E+A ++ +++A F + +A+++ L A+ QY Sbjct: 30 DDPTAKMKPEEILEQAREEVRNFQYTQAVTLFEKLEGRAAGTPLAQQAQLEKAYAQYKDD 89 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGM----------SYAQMIRDVPYDQRATKLM 158 + QA + + ++ +P S +DY YL G+ S+ DQ A K Sbjct: 90 QSAQAVATLDRFMRLHPASPAIDYALYLKGLVNFNDDLGLFSFITRQDLSERDQLAAKES 149 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + +V R+ +S Y AR + N LA EV + RYY KRG YVAAI R Q +A Sbjct: 150 WSAFNELVTRFPDSRYSADARARMVYIVNTLARYEVHVARYYFKRGAYVAAINRAQQAVA 209 Query: 219 NYSDAEHAEEAMARLVEAYVALA---LMDEAREVVS 251 +Y A E+A+ LV++Y AL L D+AR V++ Sbjct: 210 DYRTAPALEDALQILVDSYEALNMPQLRDDARRVLA 245 >gi|152997614|ref|YP_001342449.1| competence lipoprotein ComL [Marinomonas sp. MWYL1] gi|150838538|gb|ABR72514.1| competence lipoprotein ComL, putative [Marinomonas sp. MWYL1] Length = 280 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 121/251 (48%), Gaps = 20/251 (7%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 L +F+ + FS+ F+V + R+ L +R Y+KA LKE + A + Sbjct: 7 LLRFSGIVSFSL---FIVACSSKQVREPDLP-------ERVYYDKAQQALKENLPTTAIK 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + +PF + ++ L + Q A + A + E +I +PE +VDY YY+ Sbjct: 57 HLKDLDSRYPFGEFSTRAELDLIYAQMEASDFIAAHASAERFIKNHPEHDSVDYAYYMRA 116 Query: 139 MSY-----AQMIRDVPYD--QRATKLMLQYMSRIVE---RYTNSPYVKGARFYVTVGRNQ 188 +S + M R + D +R +K + + + + + R+ S Y A+ + R Sbjct: 117 LSTYKGAESLMSRYLNLDPSERDSKELAKAFNELADFTSRFPESTYAPDAKARMYYLREM 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A E+++ RYYLKR ++A+ R Q V+ +Y EEA+A +++Y L D A+ Sbjct: 177 VARHELQVARYYLKRKAPLSALRRSQEVIQHYPSTRSVEEALAISIQSYNDLKQTDLAQT 236 Query: 249 VVSLIQERYPQ 259 ++++++ +P Sbjct: 237 NLAVLKQNFPH 247 >gi|326560262|gb|EGE10650.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis 7169] gi|326566420|gb|EGE16570.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis BC1] Length = 356 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 21/221 (9%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 TD Y Y++A L + A E N +P A+++LL + QY A ++ Sbjct: 41 TDAAY----YQEASEALDKNQNRNAIEALNNIRTFYPTGQYAQQALLDLIYAQYKANDFE 96 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKLM 158 EE+I +YP S++VDY Y+ G+++ Q RDV Y +L Sbjct: 97 AVLQSTEEFIHRYPNSRSVDYALYVQGVTHMGGAPKASRLVRFDQSHRDVTY----LRLA 152 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + +++ Y +SPYV A + N A E+ R+Y+KR VAA R + V Sbjct: 153 FRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEHELAAARWYVKRDAMVAAANRAKWVFQ 212 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y + EA+A L + L L + A++ L+Q YPQ Sbjct: 213 YYPQSTGVPEAIAILAYSNQKLGLTETAKQYKQLLQINYPQ 253 >gi|289209196|ref|YP_003461262.1| outer membrane assembly lipoprotein YfiO [Thioalkalivibrio sp. K90mix] gi|288944827|gb|ADC72526.1| outer membrane assembly lipoprotein YfiO [Thioalkalivibrio sp. K90mix] Length = 279 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 10/210 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L E N+ +A EY+ + +PF A+++ + + Y A + + A + + Sbjct: 37 QLYGEAKNALNEGNYDQAVEYYEKLEARYPFGRYAQQAQIEIPYAYYKAREPEAAIAAVD 96 Query: 119 EYITQYPESKNVDYVYYLVGMS--------YAQMIRDVP--YDQRATKLMLQYMSRIVER 168 +I P N+DY YYL G+ A + P D + Q R++ Sbjct: 97 RFIQLNPRHPNLDYAYYLRGLINFNRQQGFLANLFPRDPAEMDPEPFEQAFQDFDRLIRE 156 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + +S Y + + + RN LAA E+ + +Y++R +VA R + VLA Y AE + Sbjct: 157 FPDSRYAQDSYLRMVYIRNALAAYELRVAEFYMERTAWVAGAERARHVLATYPGAEVQPQ 216 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258 A+ L AY L L D A + +++ YP Sbjct: 217 ALGVLWRAYTELGLEDYADATMQVLELNYP 246 >gi|238791394|ref|ZP_04635033.1| hypothetical protein yinte0001_31510 [Yersinia intermedia ATCC 29909] gi|238729527|gb|EEQ21042.1| hypothetical protein yinte0001_31510 [Yersinia intermedia ATCC 29909] Length = 240 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 60/233 (25%), Positives = 105/233 (45%), Gaps = 15/233 (6%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 A LV S++DV D+ E+Y A L++ NF A +PF Sbjct: 8 ATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNRYPFG 62 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM------ 144 +++ L + Y + A + + ++ P N+DYV Y+ G++ + Sbjct: 63 PYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDDSALQ 122 Query: 145 ----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 I D + K + +++++ Y NS Y A+ +T +N+LA E+ + +YY Sbjct: 123 GFFGIDRSDRDPQHAKAAFRDFNQLIQNYPNSQYATDAQKRLTFLKNRLAKHELAVAQYY 182 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 KRG YVA + R + +L +Y D + +A+ + AY L L EA +V +I Sbjct: 183 TKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLNAEADKVAKII 235 >gi|326570228|gb|EGE20273.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis BC8] Length = 356 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 21/221 (9%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 TD Y Y++A L + A E N +P A+++LL + QY A ++ Sbjct: 41 TDAAY----YQEASEALDKNQNRNAIEALNNIRTFYPTGQYAQQALLDLIYAQYKANDFE 96 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKLM 158 EE+I +YP S++VDY Y+ G+++ Q RDV Y +L Sbjct: 97 AVLQSTEEFIHRYPNSRSVDYALYVQGVTHMGGAPKASRLVRFDQSHRDVTY----LRLA 152 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + +++ Y +SPYV A + N A E+ R+Y+KR VAA R + V Sbjct: 153 FRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEHELAAARWYVKRDAMVAAANRAKWVFQ 212 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y + EA+A L + L L + A++ L+Q YPQ Sbjct: 213 YYPQSTGVPEAIAILAYSNQKLGLTETAKQYKQLLQINYPQ 253 >gi|293604135|ref|ZP_06686543.1| competence lipoprotein ComL [Achromobacter piechaudii ATCC 43553] gi|292817360|gb|EFF76433.1| competence lipoprotein ComL [Achromobacter piechaudii ATCC 43553] Length = 262 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 10/211 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y A + + +A E +PF A+++LL A+V + G+ +QA + + Sbjct: 33 QLYADAKSEMSSGGWKEARERLTAIESRYPFGVYAQQALLELAYVNWKDGENEQALAAID 92 Query: 119 EYITQYPESKNVDYVYYLVGMS--------YAQMIRDVPYDQRATKLMLQY--MSRIVER 168 + YP DY YL G+ + P ++ L Y + +++R Sbjct: 93 RFQQLYPNHPGTDYALYLKGLINFTPASAFMTSITGQDPAERDPKGLRASYDAFNELIKR 152 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y +S Y A + N +A EV + RYY +RG YVAA R Q V+ ++ A EE Sbjct: 153 YPDSKYSVDAEKRIAWLVNTIAMNEVHVARYYYERGAYVAAANRAQTVITDFEGAPATEE 212 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259 A+ +VE+Y L + D + + + +P Sbjct: 213 ALYLMVESYDKLGMTDLKNDAQRVYDKNFPN 243 >gi|187477716|ref|YP_785740.1| lipoprotein [Bordetella avium 197N] gi|115422302|emb|CAJ48826.1| lipoprotein [Bordetella avium 197N] Length = 282 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 10/198 (5%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N+ +A + +PF A+++L+ A+V + G+ +QA + + + YP D Sbjct: 64 NWKEARDRLTAIESRYPFGTYAQQALIELAYVNWKDGENEQALAAIDRFQQLYPNHPGTD 123 Query: 132 YVYYLVGMS--------YAQMIRDVPYDQRATKLMLQY--MSRIVERYTNSPYVKGARFY 181 YV YL G+ A + P ++ L Y + +++R+ +S Y A Sbjct: 124 YVLYLKGLINFTPASAFMANLTGQDPAERDPKGLRASYDAFNELIKRFPDSKYTPDAEQR 183 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 + N +A EV + RYY RG YVAAI R Q VL ++ A EEA+ +V +Y L Sbjct: 184 MNWLVNAIAMNEVHVARYYYTRGAYVAAINRAQTVLTDFDGAPATEEALYIMVLSYDKLQ 243 Query: 242 LMDEAREVVSLIQERYPQ 259 + + ++ + +P Sbjct: 244 MKQLKEDTERVLDKNFPN 261 >gi|59800727|ref|YP_207439.1| ComL [Neisseria gonorrhoeae FA 1090] gi|194097999|ref|YP_002001047.1| ComL, competence lipoprotein [Neisseria gonorrhoeae NCCP11945] gi|239998465|ref|ZP_04718389.1| ComL, competence lipoprotein [Neisseria gonorrhoeae 35/02] gi|240013590|ref|ZP_04720503.1| ComL, competence lipoprotein [Neisseria gonorrhoeae DGI18] gi|240016029|ref|ZP_04722569.1| ComL, competence lipoprotein [Neisseria gonorrhoeae FA6140] gi|240080170|ref|ZP_04724713.1| ComL, competence lipoprotein [Neisseria gonorrhoeae FA19] gi|240112384|ref|ZP_04726874.1| ComL, competence lipoprotein [Neisseria gonorrhoeae MS11] gi|240115124|ref|ZP_04729186.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID18] gi|240117407|ref|ZP_04731469.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID1] gi|240120660|ref|ZP_04733622.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID24-1] gi|240122964|ref|ZP_04735920.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID332] gi|240125215|ref|ZP_04738101.1| ComL, competence lipoprotein [Neisseria gonorrhoeae SK-92-679] gi|240127669|ref|ZP_04740330.1| ComL, competence lipoprotein [Neisseria gonorrhoeae SK-93-1035] gi|254493185|ref|ZP_05106356.1| competence lipoprotein comL [Neisseria gonorrhoeae 1291] gi|260441059|ref|ZP_05794875.1| ComL, competence lipoprotein [Neisseria gonorrhoeae DGI2] gi|268594326|ref|ZP_06128493.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae 35/02] gi|268596321|ref|ZP_06130488.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae FA19] gi|268598445|ref|ZP_06132612.1| competence lipoprotein comL [Neisseria gonorrhoeae MS11] gi|268600799|ref|ZP_06134966.1| competence lipoprotein comL [Neisseria gonorrhoeae PID18] gi|268603104|ref|ZP_06137271.1| competence lipoprotein comL [Neisseria gonorrhoeae PID1] gi|268681585|ref|ZP_06148447.1| competence lipoprotein comL [Neisseria gonorrhoeae PID332] gi|268683813|ref|ZP_06150675.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-92-679] gi|268686055|ref|ZP_06152917.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-93-1035] gi|291044391|ref|ZP_06570100.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae DGI2] gi|293399572|ref|ZP_06643725.1| lipoprotein [Neisseria gonorrhoeae F62] gi|5921830|sp|Q50985|COML_NEIGO RecName: Full=Competence lipoprotein ComL; Flags: Precursor gi|1107833|emb|CAA90076.1| ComL, competence lipoprotein [Neisseria gonorrhoeae] gi|59717622|gb|AAW89027.1| competence lipoprotein [Neisseria gonorrhoeae FA 1090] gi|193933289|gb|ACF29113.1| ComL, competence lipoprotein [Neisseria gonorrhoeae NCCP11945] gi|226512225|gb|EEH61570.1| competence lipoprotein comL [Neisseria gonorrhoeae 1291] gi|268547715|gb|EEZ43133.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae 35/02] gi|268550109|gb|EEZ45128.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae FA19] gi|268582576|gb|EEZ47252.1| competence lipoprotein comL [Neisseria gonorrhoeae MS11] gi|268584930|gb|EEZ49606.1| competence lipoprotein comL [Neisseria gonorrhoeae PID18] gi|268587235|gb|EEZ51911.1| competence lipoprotein comL [Neisseria gonorrhoeae PID1] gi|268621869|gb|EEZ54269.1| competence lipoprotein comL [Neisseria gonorrhoeae PID332] gi|268624097|gb|EEZ56497.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-92-679] gi|268626339|gb|EEZ58739.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-93-1035] gi|291011285|gb|EFE03281.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae DGI2] gi|291610141|gb|EFF39263.1| lipoprotein [Neisseria gonorrhoeae F62] gi|317163747|gb|ADV07288.1| ComL [Neisseria gonorrhoeae TCDC-NG08107] gi|1588996|prf||2209423A lipoprotein Length = 267 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L N+++A + + FP + AR+S L +A+ Y + +A + E Sbjct: 37 KLYAEAQDELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIE 96 Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168 + +P+ N+DY YL G+ S+ + + D +A + Q + +V+R Sbjct: 97 RFRRLHPQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQR 156 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A + + L E+ + RYY+KRG Y+AA R + ++ +Y + + EE Sbjct: 157 FPNSKYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAKKIIGSYQNTRYVEE 216 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 ++A L AY L A + +++ +P+ Sbjct: 217 SLAILELAYKKLDKPQLAADTRRVLETNFPKS 248 >gi|121611397|ref|YP_999204.1| hypothetical protein Veis_4485 [Verminephrobacter eiseniae EF01-2] gi|121556037|gb|ABM60186.1| putative transmembrane protein [Verminephrobacter eiseniae EF01-2] Length = 265 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 59/181 (32%), Positives = 95/181 (52%), Gaps = 16/181 (8%) Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS--------YAQ 143 +A+++ + A+ Y +G+ QA + + ++ +P S +DY YL G++ ++ Sbjct: 69 LAQQAQIDKAYAHYKSGEKAQAVATLDRFMKLHPVSPALDYALYLKGLANFNDNLGLFSF 128 Query: 144 MIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + R+ DQ+A K + +V R+ S Y + AR +T N LA EV + RYY Sbjct: 129 ISREDLSERDQQAAKDSFEAFRELVNRFPQSRYAQDARQRMTYIVNSLAQYEVHVARYYY 188 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL---ALMDEAREVVSLIQERYP 258 G YVAAI R L L++Y EEA+ L+++Y AL AL D+AR V + + YP Sbjct: 189 LHGAYVAAIGRAHLALSDYQGVPAQEEALYILIQSYDALGMTALRDDARRV---MDKSYP 245 Query: 259 Q 259 Q Sbjct: 246 Q 246 >gi|239815170|ref|YP_002944080.1| outer membrane assembly lipoprotein YfiO [Variovorax paradoxus S110] gi|239801747|gb|ACS18814.1| outer membrane assembly lipoprotein YfiO [Variovorax paradoxus S110] Length = 268 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 10/178 (5%) Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM--------SYAQ 143 +A+++ L A+ QY +G+ A + + ++ +P S +DY YL G+ +A Sbjct: 72 LAQQAQLEKAYAQYKSGEKANAIATIDRFLKLHPASPAIDYALYLKGVINFNDDLGMFAF 131 Query: 144 MIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + R DQ+A K + + R+ S Y AR + N LA EV + RYY Sbjct: 132 LTRQDLSERDQKAAKESFESFKELATRFPESRYAPDARQRMNYIVNSLAQYEVHVARYYY 191 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 RG Y+AAI R QL L++Y + EEA+ +V +Y AL + D + ++ YP Sbjct: 192 SRGAYLAAINRAQLALSDYREVPALEEALYIIVRSYDALGMKDLRDDAQRVLTTNYPH 249 >gi|256822305|ref|YP_003146268.1| outer membrane assembly lipoprotein YfiO [Kangiella koreensis DSM 16069] gi|256795844|gb|ACV26500.1| outer membrane assembly lipoprotein YfiO [Kangiella koreensis DSM 16069] Length = 268 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 10/211 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +E+++ A ++ N+ +A E + +PF ++ ++ L + + Y+ +L Sbjct: 51 QELFDGAKRSMRNGNYVRATELLEEIDTRYPFGRISEQAKLELIYAYFKRADYESGQALA 110 Query: 118 EEYITQYPESKNVDYVYYLVG-MSYAQMI---RDV------PYDQRATKLMLQYMSRIVE 167 + ++ Q+P+ +N DYVYY+ G M Y Q + ++V D K +VE Sbjct: 111 DRFLRQHPQHENADYVYYMKGVMHYEQEVGTFKEVFSADIEKRDTSNIKAAFDNFKALVE 170 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y S Y AR + RN LA E+ + RYY++R Y+ A R + ++ N+ Sbjct: 171 VYPESEYAPDARKRMIQIRNLLADYELHVARYYMQRDSYIGAANRAKYIVENFPKTPAVP 230 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYP 258 A+ L+ +Y L L + + E ++ YP Sbjct: 231 SALEILINSYKILELPEISEEYRKVLLLNYP 261 >gi|145297341|ref|YP_001140182.1| ComL family lipoprotein [Aeromonas salmonicida subsp. salmonicida A449] gi|142850113|gb|ABO88434.1| lipoprotein, ComL family [Aeromonas salmonicida subsp. salmonicida A449] Length = 257 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 12/216 (5%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y+KA L L N+ A E +PF + + L + Y QA + + Sbjct: 42 LYQKARLKLDAGNYVNAIELLEALDSRYPFGAYSNQVQLDLIYAYYKQDDTAQAIANIDR 101 Query: 120 YITQYPESKNVDYVYYLVGMS-----------YAQMIRDVPYDQRATKLMLQYMSRIVER 168 +I P KN+DYV+Y+ G++ + + RD D + Q +++ Sbjct: 102 FIRLNPAHKNIDYVFYMRGLTNMAGDYNFFQDFLGINRD-DKDPSYARQAFQDFKTLLQN 160 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y AR + +N+LA ++ + YY+KR +AA R +L++ Y D E+ Sbjct: 161 YPNSVYAADARARMIGLKNRLARYDLSVAEYYVKRDALIAAANRAKLIVETYPDTAETEK 220 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 A+ +VE+Y L + A+ ++ + YP R Sbjct: 221 ALEIMVESYDTLKMPTLAQHAREVLAKNYPDNRLGR 256 >gi|167031684|ref|YP_001666915.1| competence lipoprotein ComL [Pseudomonas putida GB-1] gi|166858172|gb|ABY96579.1| competence lipoprotein ComL [Pseudomonas putida GB-1] Length = 339 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 10/210 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y++A L +++ A +PF A ++ L + Y + + A S E Sbjct: 33 ELYQQAQADLDNSSYTSAVNKLKALESRYPFGRYADQAQLELIYANYKNSEPEAAKSAAE 92 Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR-----ATKLMLQYMSRIVER 168 +I +P+ NVDY YYL G+ S+ Q + R +P D A + +++ R Sbjct: 93 RFIRLHPQHPNVDYAYYLKGLTSFDQDRGLLARFLPLDMTKRDPGAARDSYNEFAQLTSR 152 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A+ + RN LA+ E+ + YYL R YVAA R + V+ N+ + + Sbjct: 153 FPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLSRQAYVAAANRGRYVVENFQETPSVGD 212 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258 +A +VE+Y + L + A + ++ YP Sbjct: 213 GLAVMVESYQKMHLDELAASSLETLKLNYP 242 >gi|322514977|ref|ZP_08067989.1| DNA uptake lipoprotein [Actinobacillus ureae ATCC 25976] gi|322119030|gb|EFX91194.1| DNA uptake lipoprotein [Actinobacillus ureae ATCC 25976] Length = 260 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 60/245 (24%), Positives = 120/245 (48%), Gaps = 17/245 (6%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 KF + +VG +++++ S D+ Y K +L++ +++ A Y Sbjct: 3 KFTSLASLMLVGLLVVGCSNSANKELEESSAQDL------YTKGQTYLQDGDYNSAIRYL 56 Query: 81 NQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 + ++ + ++ L + Y G+Y +A E ++ YP S ++DYVYYL G+ Sbjct: 57 DAVGTKGGQQSAFGEQTQLSLIYANYKVGEYYKALDAAERFVRAYPNSASMDYVYYLAGL 116 Query: 140 SYAQM----IRDVPYDQRATKLMLQYMS------RIVERYTNSPYVKGARFYVTVGRNQL 189 S A++ I+D RA++ + + IV+ Y S Y + A+ ++ N++ Sbjct: 117 SNARLGDNFIQDFFGVNRASRALDSVRNAYGSFQTIVQHYPQSKYAQDAKNWMGYLINRM 176 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A E+ I ++Y R YVA + R + ++ Y +++ EA+A + +AY + + D A +V Sbjct: 177 AEHELAIVKFYDDREAYVAVVNRVEEMMRFYPESKPTYEALAYMQKAYEQIGIKDSAEKV 236 Query: 250 VSLIQ 254 +LI+ Sbjct: 237 AALIE 241 >gi|238765379|ref|ZP_04626303.1| hypothetical protein ykris0001_45070 [Yersinia kristensenii ATCC 33638] gi|238696421|gb|EEP89214.1| hypothetical protein ykris0001_45070 [Yersinia kristensenii ATCC 33638] Length = 240 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/233 (25%), Positives = 105/233 (45%), Gaps = 15/233 (6%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 A LV S++DV D+ E+Y A L++ NF A +PF Sbjct: 8 ATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNRYPFG 62 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM------ 144 +++ L + Y + A + + ++ P N+DYV Y+ G++ + Sbjct: 63 PYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDDSALQ 122 Query: 145 ----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 I D + K + +++++ Y NS Y A+ +T +N+LA E+ + +YY Sbjct: 123 GFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLTFLKNRLAKHELAVAQYY 182 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 KRG YVA + R + +L +Y D + +A+ + AY L L EA +V +I Sbjct: 183 TKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLNAEADKVAKII 235 >gi|297180550|gb|ADI16762.1| DNA uptake lipoprotein [uncultured gamma proteobacterium HF0010_11B23] Length = 224 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 98/195 (50%), Gaps = 10/195 (5%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 + QN+ A + + R +PF A ++ + Y +G Y QA + E++I YP + Sbjct: 26 ISAQNYLGAVDSLVRIERFYPFGVYAEQARADLIYAHYMSGDYDQAYAASEKFIRLYPRN 85 Query: 128 KNVDYVYYLVGMS--YAQ-----MIRDVPYDQRATKLMLQYMSRIVE---RYTNSPYVKG 177 NVDY Y++ GM+ YA + + +R +Q + + E RY S Y+ Sbjct: 86 TNVDYAYFMKGMTGYYADEGLLGNLFSLSLAKRDIGGAMQSYADLTEFLIRYPESEYIDA 145 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 AR + RN +A+ E++ YY+KRG Y+AA+ R VL N ++ + A+ + +++ Sbjct: 146 ARERLIFLRNLIASSELDGAEYYMKRGAYLAALNRANYVLKNIPNSTETQRALDIMKKSF 205 Query: 238 VALALMDEAREVVSL 252 + L + A +V S+ Sbjct: 206 IELGYEEYAEKVSSV 220 >gi|325273288|ref|ZP_08139565.1| competence lipoprotein ComL [Pseudomonas sp. TJI-51] gi|324101573|gb|EGB99142.1| competence lipoprotein ComL [Pseudomonas sp. TJI-51] Length = 339 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 10/210 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y++A L +++ A +PF A ++ L + Y + + A S E Sbjct: 33 ELYQQAQADLDNSSYTSAVNKLKALESRYPFGRYADQAQLELIYANYKNAEPEAAKSAAE 92 Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR-----ATKLMLQYMSRIVER 168 +I +P+ NVDY YYL G+ S+ Q + R +P D A + +++ R Sbjct: 93 RFIRLHPQHPNVDYAYYLKGLTSFDQDRGLLARFLPLDMTKRDPGAARDSYNEFAQLTSR 152 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A+ + RN LA+ E+ + YYL R YVAA R + V+ N+ + + Sbjct: 153 FPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLSRQAYVAAANRGRYVVENFQETPSVGD 212 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258 +A +VE+Y + L + A + ++ YP Sbjct: 213 GLAVMVESYQKMHLDELAATSLETLKLNYP 242 >gi|332525785|ref|ZP_08401929.1| hypothetical protein RBXJA2T_08043 [Rubrivivax benzoatilyticus JA2] gi|332109339|gb|EGJ10262.1| hypothetical protein RBXJA2T_08043 [Rubrivivax benzoatilyticus JA2] Length = 253 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 10/177 (5%) Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS--------YAQ 143 +A++S + A++ + G+ QA + E +I P S +DY YL G+ + + Sbjct: 57 LAQQSQIDLAYLYWKTGERAQALTTIERFIRLNPSSPALDYAMYLRGLINFNEDMGLFGR 116 Query: 144 MIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + R DQRA + Q ++VE++ S Y A+ + N LAA EV + RYY Sbjct: 117 IARQDLSERDQRAARDAYQAFKQLVEQFPQSRYTPDAKLRMDYIVNSLAAYEVHVARYYF 176 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 KRG YVAA R Q +A + + AEE + +V++Y L L+ + + ++Q+ YP Sbjct: 177 KRGAYVAAANRAQQAVAEFQRSPAAEEGLFLMVQSYDRLQLVQLRDDALRVLQKNYP 233 >gi|104783635|ref|YP_610133.1| competence lipoprotein ComL [Pseudomonas entomophila L48] gi|95112622|emb|CAK17350.1| putative competence lipoprotein ComL [Pseudomonas entomophila L48] Length = 339 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 10/210 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y++A L +++ A +PF A ++ L + Y + + A S E Sbjct: 33 ELYQQAQADLDNSSYTSAVNKLKALESRYPFGRYADQAQLELIYANYKNSEPEAAKSAAE 92 Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR-----ATKLMLQYMSRIVER 168 +I +P+ NVDY YYL G+ S+ Q + R +P D A + +++ R Sbjct: 93 RFIRLHPQHPNVDYAYYLKGLTSFDQDRGLLARFLPLDMTKRDPGAARDSYNEFAQLTSR 152 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A+ + RN LA+ E+ + YYL R YVAA R + V+ N+ + + Sbjct: 153 FPNSRYSPDAKQRMIYLRNLLASYEIHVANYYLSREAYVAAANRGRYVVENFQETPSVGD 212 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258 +A +VE+Y + L + A + ++ YP Sbjct: 213 GLAVMVESYQHMHLDELAATSLETLKLNYP 242 >gi|221135102|ref|ZP_03561405.1| Competence lipoprotein ComL [Glaciecola sp. HTCC2999] Length = 252 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 10/210 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA ++ NF A E + +PF ++ + L + Y +G QA + + Sbjct: 38 IYAKAKTAMENGNFGGAAEILSDLDSRYPFGELSHQVQLDLIYSYYKSGDSAQALATIDR 97 Query: 120 YITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERY 169 +I P K++DY Y++ G++ +M I D A++ ++++ + Sbjct: 98 FIRLNPNHKDIDYAYFMRGLTNMEMDDNLFQSLFNIDRSDRDPSASREAFNDFRQLLDTF 157 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 S Y A+ + + +LA E+ I R+Y++R YVAA R Q VL Y D +EA Sbjct: 158 PESKYATDAQKRMVYIKTRLAKYEIAIARFYMRREAYVAAANRGQYVLEYYPDTGMVQEA 217 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQ 259 + +V Y L L + +++ YP+ Sbjct: 218 LEIMVSCYDQLGLDQLKANAIKILKLNYPE 247 >gi|160898939|ref|YP_001564521.1| putative transmembrane protein [Delftia acidovorans SPH-1] gi|160364523|gb|ABX36136.1| putative transmembrane protein [Delftia acidovorans SPH-1] Length = 263 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/192 (30%), Positives = 88/192 (45%), Gaps = 13/192 (6%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 F KA F + +A+++ L A+ QY +G QA + + ++ +P S DY Sbjct: 50 FDKAVPLFEKLEGRAAGTPLAQQAQLDKAYAQYKSGDKIQATATLDRFLKLHPASPATDY 109 Query: 133 VYYLVGM----------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 YL G+ S+ DQ+A K + +V R+ S Y + +R + Sbjct: 110 ALYLKGLVNFNDNLGMFSWLSRQDLSERDQKAAKDSFESFRELVTRFPESRYAEDSRLRM 169 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA- 241 N LA EV + RYY RG YVAAI R Q + +Y EAM LV +Y AL Sbjct: 170 QYIVNSLAQYEVHVARYYYGRGAYVAAIARAQTAVKDYQGVPAVREAMQILVNSYDALGM 229 Query: 242 --LMDEAREVVS 251 L D+A+ V++ Sbjct: 230 TQLRDDAQRVLT 241 >gi|255019803|ref|ZP_05291879.1| Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Acidithiobacillus caldus ATCC 51756] gi|254970732|gb|EET28218.1| Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Acidithiobacillus caldus ATCC 51756] Length = 249 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/236 (25%), Positives = 111/236 (47%), Gaps = 2/236 (0%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRY--QREVYEKAVLFLKEQNFSKAYEYFNQC 83 IF +A L+G + D DS+ + + +Y A ++S A + + Sbjct: 6 IFPIVAHLTLLGVLSGCASDGAKDSLKESSHLSAAAMYRPAKAAQDRGDYSSAVRLYEEL 65 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P+ A ++ L +A+ Y G + AA+ E +I +P + VDY +YL G++Y Q Sbjct: 66 ETRYPYGPYAEQAQLNTAYCYYKQGDSEAAAAAAERFIKLHPVNPFVDYAWYLKGIAYYQ 125 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 I+ ++ + + + +V+R+ NS Y AR + + L +E++I ++Y R Sbjct: 126 AIQGAQWNPKPLEESFATLETLVKRWPNSAYAADARLRMEKIIDILGQRELDICKFYYIR 185 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YVAA R V+ Y + EEA+ L +Y + L A+ +++ YPQ Sbjct: 186 HAYVAAANRCNDVVTRYQLSPAREEALYYLSLSYRHMNLDGLAKTTAGVLKANYPQ 241 >gi|197284292|ref|YP_002150164.1| outer membrane protein assembly complex subunit YfiO [Proteus mirabilis HI4320] gi|194681779|emb|CAR40993.1| putative lipoprotein [Proteus mirabilis HI4320] Length = 244 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 12/206 (5%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y + L + N+ A + +PF +++ L + Y + + A S + Sbjct: 35 ELYATSQEKLLDGNYGAAIKQLESLDNRYPFGPYSQQVQLDLIYAYYKSAELPMAISAID 94 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-----------DQRATKLMLQYMSRIVE 167 ++ P N+DYV Y+ G++ AQ + D D + ++ + S++V Sbjct: 95 RFMRLNPTHPNIDYVLYMRGLT-AQALDDSALQGFFGIDRSDRDPQHARVAFKDFSQLVR 153 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y +S Y A + +N+LA E+ + ++Y KRG YVA I R + ++ +Y D E Sbjct: 154 YYPDSLYTADATKRLVFLKNRLAKYELSVAKFYTKRGAYVAVINRVEQMMRDYPDTEATR 213 Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253 EA+ + AY L L EA +V SLI Sbjct: 214 EALVYMENAYKKLGLTQEADKVASLI 239 >gi|119476935|ref|ZP_01617216.1| competence protein ComL [marine gamma proteobacterium HTCC2143] gi|119449742|gb|EAW30979.1| competence protein ComL [marine gamma proteobacterium HTCC2143] Length = 294 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/229 (27%), Positives = 111/229 (48%), Gaps = 16/229 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + A +IF S V L G SS D +T ++E+YE A L+++++ A + Sbjct: 1 MNRLAKSIFLS--VFLLAGLAGCSSDDEVPQDMT----EKELYESAQDSLRQESYQNAVK 54 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 FPF A ++ L + Y + + + + + +I +P+ N DY YY+ G Sbjct: 55 KLQLLEARFPFGPYAEQAQLEIIYAHYLNFESEASIAAADRFIRLHPQHPNADYAYYIKG 114 Query: 139 M-SYAQ----MIRDVPYDQ--RATKLMLQYMS---RIVERYTNSPYVKGARFYVTVGRNQ 188 + +Y + + R +P D R LQ +++ RY +SPY A+ + R + Sbjct: 115 LANYVEGEGFLDRFLPTDMTMRDPGAALQSFEDFRQLLYRYPDSPYASDAKARMLYLRAR 174 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 LA E+ + YY +RG Y+AA R + V+ N+ +A+A +V+AY Sbjct: 175 LARYEINVANYYFERGAYIAAANRGRYVVENFPQTPATADALAVMVQAY 223 >gi|296314699|ref|ZP_06864640.1| competence lipoprotein ComL [Neisseria polysaccharea ATCC 43768] gi|296838533|gb|EFH22471.1| competence lipoprotein ComL [Neisseria polysaccharea ATCC 43768] Length = 267 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 119/254 (46%), Gaps = 18/254 (7%) Query: 19 LYKFALTIFFSIAV--CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 + KF LT+ +A+ C G + ++ +T ++Y +A L N+++A Sbjct: 1 MKKFLLTVSLGLALSACATKGTVDKDAQ------ITQDWSVEKLYAEAQDELNSSNYTRA 54 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + + FP + A++S L +A+ Y + +A + + + +P+ N+DY YL Sbjct: 55 VKLYEILESRFPTSRHAQQSQLDTAYAYYKDDEKDKALAAIDRFRRLHPQHPNMDYALYL 114 Query: 137 VGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 G+ S+ + + D +A + Q + +V+R+ NS Y A + Sbjct: 115 RGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMIKLV 174 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 + L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A Sbjct: 175 DALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYKKLDKPQLA 234 Query: 247 REVVSLIQERYPQG 260 + +++ +P+ Sbjct: 235 ADTHRVLEANFPKS 248 >gi|293390712|ref|ZP_06635046.1| lipoprotein [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951246|gb|EFE01365.1| lipoprotein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 262 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 10/207 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ +Y +L++ ++S+A YFN S FP + + L + Y + Y + Sbjct: 32 EQTLYTTGQTYLQDGDYSQAIRYFNAVSNRFPGSSYGEQVQLNLIYAYYKSQDYNETLLT 91 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----QRAT------KLMLQYMSRIV 166 + +I +YP S ++DY Y+ G++ + + + D RAT K +V Sbjct: 92 IDRFIQRYPNSSHLDYALYMAGLTNSALGDNFFQDFFGVDRATRENTSIKTAFANFQNLV 151 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + NSPY A +T + LA E+EI ++Y KR YVA R +L Y D + Sbjct: 152 NHFPNSPYTPDALARMTYIKASLARHELEIAKFYFKRDAYVATANRVVSMLKLYPDTQAT 211 Query: 227 EEAMARLVEAYVALALMDEAREVVSLI 253 +A+ + E+Y + L A + +I Sbjct: 212 LDALPLMKESYEKMNLKHLADQTAQVI 238 >gi|121999015|ref|YP_001003802.1| putative lipoprotein [Halorhodospira halophila SL1] gi|121590420|gb|ABM63000.1| putative lipoprotein [Halorhodospira halophila SL1] Length = 253 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 18/213 (8%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L N+S+A E F +PF A +S LM + Y AG+++ A + E Sbjct: 35 ELYTDARSSLSSGNYSQAVERFENLVARYPFGTHAVQSQLMIIYAHYLAGQHESAIAAAE 94 Query: 119 EYITQYPESKNVDYVYYLVGMS-YAQ-------------MIRDVPYDQRATKLMLQYMSR 164 + +P +++V Y Y+ G+S AQ +RD +RA Sbjct: 95 RFQRMHPRNEHVAYALYMRGVSRQAQGPGGLGDLFNVDANLRDPEPKRRA----FADFRE 150 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + E+Y +S Y+ A + R LA E+ +GR+YL+R Y+A+ R + ++A Y Sbjct: 151 LTEQYPDSEYIDDAVERMEQIRVALAEHELYVGRFYLERSAYIASANRARTIIARYPGTP 210 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 EAM L E+Y L L +V ++ER+ Sbjct: 211 AVPEAMGMLAESYRRLGLDPLDEDVERALRERH 243 >gi|227357803|ref|ZP_03842151.1| DNA uptake lipoprotein ComL [Proteus mirabilis ATCC 29906] gi|227161913|gb|EEI46931.1| DNA uptake lipoprotein ComL [Proteus mirabilis ATCC 29906] Length = 241 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 12/206 (5%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y + L + N+ A + +PF +++ L + Y + + A S + Sbjct: 32 ELYATSQEKLLDGNYGAAIKQLESLDNRYPFGPYSQQVQLDLIYAYYKSAELPMAISAID 91 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-----------DQRATKLMLQYMSRIVE 167 ++ P N+DYV Y+ G++ AQ + D D + ++ + S++V Sbjct: 92 RFMRLNPTHPNIDYVLYMRGLT-AQALDDSALQGFFGIDRSDRDPQHARVAFKDFSQLVR 150 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y +S Y A + +N+LA E+ + ++Y KRG YVA I R + ++ +Y D E Sbjct: 151 YYPDSLYTADATKRLVFLKNRLAKYELSVAKFYTKRGAYVAVINRVEQMMRDYPDTEATR 210 Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253 EA+ + AY L L EA +V SLI Sbjct: 211 EALVYMENAYKKLGLTQEADKVASLI 236 >gi|261867119|ref|YP_003255041.1| lipoprotein [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412451|gb|ACX81822.1| lipoprotein [Aggregatibacter actinomycetemcomitans D11S-1] Length = 262 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 10/207 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ +Y +L++ ++S+A YFN S FP + + L + Y + Y + Sbjct: 32 EQTLYTTGQTYLQDGDYSQAIRYFNAVSNRFPGSSYGEQVQLNLIYAYYKSQDYSETLLT 91 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----QRAT------KLMLQYMSRIV 166 + +I +YP S ++DY Y+ G++ + + + D RAT K +V Sbjct: 92 IDRFIQRYPNSSHLDYALYMAGLTNSALGDNFFQDFFGVDRATRENTSIKTAFANFQNLV 151 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + NSPY A +T + LA E+EI ++Y KR YVA R +L Y D + Sbjct: 152 NHFPNSPYTPDALARMTYIKASLARHELEIAKFYFKRDAYVATANRVVSMLKLYPDTQAT 211 Query: 227 EEAMARLVEAYVALALMDEAREVVSLI 253 +A+ + E+Y + L A + +I Sbjct: 212 LDALPLMKESYEKMNLKHLADQTAKVI 238 >gi|311104862|ref|YP_003977715.1| competence lipoprotein ComL [Achromobacter xylosoxidans A8] gi|310759551|gb|ADP15000.1| competence lipoprotein ComL [Achromobacter xylosoxidans A8] Length = 280 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 10/211 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y A + + +A E +PF A+++LL A+V + G+ +QA + + Sbjct: 51 QLYADAKAEMSSGGWKEARERLTAIESRYPFGVYAQQALLELAYVNWKDGENEQALAAID 110 Query: 119 EYITQYPESKNVDYVYYLVG----------MSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + YP DY YL G MS D + + + +++R Sbjct: 111 RFQQLYPNHPGTDYALYLKGLINFTPASAFMSSITGQDPAERDPKGLRASYDAFNELIKR 170 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y +S Y A V N +A EV + RYY +RG YVAA R Q V+ ++ A EE Sbjct: 171 YPDSKYTVDAEKRVAWLVNTIAMNEVHVARYYYERGAYVAAANRAQTVITDFEGAPATEE 230 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259 A+ +VE+Y L + + + + + +P Sbjct: 231 ALYLMVESYDKLGMTELKNDSQRVYDKNFPN 261 >gi|294669552|ref|ZP_06734619.1| hypothetical protein NEIELOOT_01451 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308465|gb|EFE49708.1| hypothetical protein NEIELOOT_01451 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 268 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/252 (23%), Positives = 116/252 (46%), Gaps = 13/252 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K L + IA+ + S +D + V ++Y +A L N+++A + Sbjct: 1 MKKILLVVALGIALGGCAANKGTSDKDAQITQDWPVE---KLYAEAQDELNSSNYTRAVK 57 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + FP A+++ L +A+ Y + ++A + E + +P+ N+DY YL G Sbjct: 58 LYELLESRFPQGRYAQQAQLDTAYAYYKDEEREKALAAVERFQRLHPQHPNMDYALYLKG 117 Query: 139 M-------SYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + S+ + + D +A + Q + +V+RY S YV+ A + + Sbjct: 118 LILFNEDKSFLNKLASQDWSDRDPKANREAYQAFAELVQRYPQSKYVEEASKQMEKLVDA 177 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + RYY KRG ++AA R Q ++ + + EEA+A + +Y + A + Sbjct: 178 LAGNEISVARYYAKRGAHLAAANRAQNIITGFQNTRFTEEALAIMEVSYRKMNRQQLADD 237 Query: 249 VVSLIQERYPQG 260 ++Q+ +PQ Sbjct: 238 TRRILQQNFPQS 249 >gi|303326797|ref|ZP_07357239.1| putative competence protein [Desulfovibrio sp. 3_1_syn3] gi|302862785|gb|EFL85717.1| putative competence protein [Desulfovibrio sp. 3_1_syn3] Length = 243 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 18/214 (8%) Query: 22 FALTI-FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 F L + F+++ C ++ +YL D +E++E A + E+N+ +A E + Sbjct: 9 FVLAVSLFAVSGCGIIDM-------IYLPPAEDT--AQEIFEAANDAMSEKNYVRAVELY 59 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 N+ +PF+ + L + +Y+ AA +++ + +P + + YV Y GMS Sbjct: 60 NKLRDTYPFSPYTIDAELSLGDAYFLDEEYELAAETYKDFESLHPRHEAIPYVLYQTGMS 119 Query: 141 YAQMIRDVPYDQRATKLM--LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 + R + D+ T+L Y +R+ + Y +SPY KGA ++ R +A E+ I Sbjct: 120 LMKQFRSI--DRATTELQEAYDYFNRLSQMYPDSPYAKGAEEHMHTCRKLMAEHELYIAD 177 Query: 199 YYLKRGEYVAAIPRFQLVLANYSD----AEHAEE 228 + +Y A R++ ++ N+ D AEHA+E Sbjct: 178 VFWHMKKYGPAWRRYEFIMENFKDVPEVAEHAKE 211 >gi|71282332|ref|YP_270574.1| putative lipoprotein [Colwellia psychrerythraea 34H] gi|71148072|gb|AAZ28545.1| putative lipoprotein [Colwellia psychrerythraea 34H] Length = 252 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/250 (24%), Positives = 111/250 (44%), Gaps = 14/250 (5%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K + I ++ L G SS + +D V D Q ++ A L + KA + Sbjct: 3 KLTVKIILTVLALALTGC---SSSENDIDKVPDKSAQ-SLFVDARTALDNGLYQKAIQIL 58 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY---LV 137 FPF ++ + L + Y +G Q +L + ++ P + N+DYVYY L+ Sbjct: 59 GAIDSRFPFGPISHQVQLDLIYAYYKSGDAAQGIALADRFLRLNPNNSNIDYVYYMRALI 118 Query: 138 GMSYAQ-MIRDV------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 +S + + +D+ D A++ IV Y +S Y +R + +++LA Sbjct: 119 NISTEENLFQDLAGIDRSDRDPEASRSAFNDFKSIVTDYPDSKYAADSRKRMISIKSRLA 178 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 E+ + +YY+KR Y +A R + V+ +S + E+A+ ++ Y L L D + + Sbjct: 179 QYEIAVAKYYVKREAYASAANRARYVVEYFSPSPEIEQALEIMINCYDKLGLADLKKNAL 238 Query: 251 SLIQERYPQG 260 ++ YP Sbjct: 239 QVLAANYPNN 248 >gi|261364921|ref|ZP_05977804.1| competence lipoprotein ComL [Neisseria mucosa ATCC 25996] gi|288566704|gb|EFC88264.1| competence lipoprotein ComL [Neisseria mucosa ATCC 25996] Length = 268 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/212 (25%), Positives = 102/212 (48%), Gaps = 10/212 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L N+++A + + FP A+++ L +A+ Y + ++A + + Sbjct: 38 KLYAEAHDELNSSNYTRAIKLYEILESRFPNGRYAQQAQLDTAYAYYKDDEPEKALAAID 97 Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168 + +P+ N+DY YL G+ S+ + + D +A + Q + +V+R Sbjct: 98 RFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQDWSDRDPKANRSAYQAFAELVQR 157 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y S Y A + + L E+ + RYY+KRG Y+AA+ R Q ++ Y + + EE Sbjct: 158 YPESKYAADATERMAKLVDALGGNEISVARYYMKRGAYLAAVNRAQKIVERYQNTRYVEE 217 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 A+A + AY L A + +++ +PQ Sbjct: 218 ALAMMELAYKKLDKPQLAADTRRVLETNFPQS 249 >gi|117621430|ref|YP_858499.1| ComL family lipoprotein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562837|gb|ABK39785.1| lipoprotein, ComL family [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 305 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 12/216 (5%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y+KA L L N+ A E +PF + + L + Y QA + + Sbjct: 90 LYQKARLKLDAGNYLNAIELLEALDSRYPFGAYSNQVQLDLIYAYYKQDDTAQAIANIDR 149 Query: 120 YITQYPESKNVDYVYYLVGMS-----------YAQMIRDVPYDQRATKLMLQYMSRIVER 168 +I P KN+DYV+Y+ G++ + + RD D + Q +++ Sbjct: 150 FIRLNPAHKNIDYVFYMRGLTNMAGDYNFFQDFLGINRD-DKDPSYARQAFQDFKTLLQN 208 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y AR + +N+LA ++ + YY+KR +AA R +L++ Y D E+ Sbjct: 209 YPNSVYAADARARMIGLKNRLARYDLSVAEYYVKRDALIAAANRAKLIVETYPDTAETEK 268 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 A+ ++ +Y +L + A+ ++ + YP R Sbjct: 269 ALEIMINSYDSLKMPTLAQHAREVLAKNYPDNRLGR 304 >gi|119946872|ref|YP_944552.1| putative lipoprotein [Psychromonas ingrahamii 37] gi|119865476|gb|ABM04953.1| putative lipoprotein [Psychromonas ingrahamii 37] Length = 257 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 10/211 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +YE+A L+ +F KA + +PF + + L + Y G+ + + Sbjct: 39 LYEQAKQALESASFEKASDILEALDTRYPFGPHSDQVQLDLIYAYYKRGETAFTLANIDR 98 Query: 120 YITQYPESKNVDYVYYLVGMSY----AQMIRDV------PYDQRATKLMLQYMSRIVERY 169 ++ P ++DY+YY+ G++Y Q +D+ D + +SRI++ Y Sbjct: 99 FLRLNPTHPDLDYIYYMRGLTYISADQQFFQDLFGIDRYNRDPNNAIQAFKDLSRIIKYY 158 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 +S Y A+ + +++LA E+ I ++YLKR Y+AAI R ++VL NY D E+A Sbjct: 159 PSSEYAVDAQQRIIDLKDRLARYEIGIAQWYLKREAYIAAINRCKIVLNNYPDMPAVEQA 218 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 + ++ +Y L + + +++++ YP+ Sbjct: 219 LEIMIASYNVLGIEEPKMNALAVLKLNYPKN 249 >gi|317401791|gb|EFV82406.1| competence lipoprotein [Achromobacter xylosoxidans C54] Length = 262 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 61/248 (24%), Positives = 104/248 (41%), Gaps = 19/248 (7%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 AL +IA C S + D T+ + ++Y A + + +A E Sbjct: 5 IALFAVIAIAGC--------GSTNSKYDKTTNWSAE-QLYADAKAEISSGGWKEARERLT 55 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG--- 138 +PF A+++LL A+V + G+ +QA + + + YP DY YL G Sbjct: 56 AIESRYPFGVYAQQALLELAYVNWKDGENEQALAAIDRFQQLYPNHPGTDYALYLKGLIN 115 Query: 139 -------MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 MS D + + + +++RY S Y A V N +A Sbjct: 116 FTPASAFMSSITGQDPAERDPKGLRASYDAFNDLIKRYPESKYTPDAEKRVAWLVNTIAM 175 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 EV + RYY +RG Y+AA R Q V+ ++ A EEA+ +V++Y L + + + Sbjct: 176 NEVHVARYYYERGAYIAAANRAQTVITDFEGAPATEEALYLMVQSYDKLGMTELKNDSQR 235 Query: 252 LIQERYPQ 259 + + +P Sbjct: 236 VFDKNFPN 243 >gi|329120442|ref|ZP_08249107.1| competence lipoprotein ComL [Neisseria bacilliformis ATCC BAA-1200] gi|327461900|gb|EGF08230.1| competence lipoprotein ComL [Neisseria bacilliformis ATCC BAA-1200] Length = 267 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L N+++A + + FP A+++ L +A+ Y + ++A + E Sbjct: 37 KLYAEAQDELNSSNYTRAVKLYELLESRFPQGRYAQQAQLDTAYAYYKDEEREKALAAVE 96 Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168 + +P+ N+DY YL G+ S+ + + D +A + Q S +V+R Sbjct: 97 RFQKLHPQHPNMDYALYLKGLILFNEDPSFLNKLAAQDWSDRDPKANREAYQAFSELVQR 156 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y S YV+ A + + LA E+ + RYY KRG Y+AA R Q ++ + + EE Sbjct: 157 YPQSKYVEDASARMAKLVDALAGNEMAVARYYAKRGAYLAAANRAQNIVTGFQNTRFVEE 216 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 A+A + +Y + A + ++Q+ +PQ Sbjct: 217 ALAIMELSYQKMGRPQLAEDTRRILQQNFPQS 248 >gi|261377889|ref|ZP_05982462.1| competence lipoprotein ComL [Neisseria cinerea ATCC 14685] gi|269145742|gb|EEZ72160.1| competence lipoprotein ComL [Neisseria cinerea ATCC 14685] Length = 267 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L N+++A + + FP + A++S L +A+ Y + +A + + Sbjct: 37 KLYAEAQDELNSSNYTRAVKLYEILESRFPTSRHAQQSQLDTAYAYYKDDEKDKALAAID 96 Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168 + +P+ N+DY YL G+ S+ + + D +A + Q + +V+R Sbjct: 97 RFRRLHPQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQR 156 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A + + L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE Sbjct: 157 FPNSKYAADATARMIKLVDALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEE 216 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 ++A L AY L A + +++ +P+ Sbjct: 217 SLAILELAYKKLDKPQLAADTHRVLEANFPKS 248 >gi|238897771|ref|YP_002923450.1| outer membrane protein assembly complex subunit, DNA uptake lipoprotein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465528|gb|ACQ67302.1| outer membrane protein assembly complex subunit, DNA uptake lipoprotein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 242 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 18/209 (8%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L E NF +A FPF G +++ L + Y + + A + + Sbjct: 34 ELYAVAQKALSEGNFREAITQLEALDTRFPFGGYSQQVQLDLIYAYYKSDQLALAQASID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMI--------------RDVPYDQRATKLMLQYMSR 164 +I P S N+DYV YL G++ + RD + RA + Q Sbjct: 94 RFIRLNPTSPNIDYVLYLRGLTEMGLDENQLQNFFGVDRSDRDPEHALRAFRDFQQ---- 149 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +++ + NS Y+ A+ + +++LA E+ + +YY+KR YVA I R + +L NY D + Sbjct: 150 LIQYHPNSTYLADAQKRLIFLKDRLATHELAVVQYYIKREAYVAVINRVEEMLKNYPDTQ 209 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLI 253 A+ + +AY L L ++A +V LI Sbjct: 210 ATRTALPLMEQAYRKLQLHEQADKVAKLI 238 >gi|325577680|ref|ZP_08147955.1| competence lipoprotein ComL [Haemophilus parainfluenzae ATCC 33392] gi|325160425|gb|EGC72551.1| competence lipoprotein ComL [Haemophilus parainfluenzae ATCC 33392] Length = 273 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 22/236 (9%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 F+IA C +++V SV D+ Y K L+E ++S + Y + F Sbjct: 25 FAIAAC------SSGNKEVEQASVDDL------YAKGAAALQEGSYSDSIRYLKAATERF 72 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY----AQ 143 P + +++L + Y Y + Y+ Q+P+S N DY Y+ G++ Sbjct: 73 PGSTYQEQAMLDLIYANYKTQDYTATLVTVDNYLHQFPQSPNRDYAVYMAGLTNLATADN 132 Query: 144 MIRDVPYDQRAT------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 MI+D RAT K +V + NSPY + A + ++ LA E+EI Sbjct: 133 MIQDFFGIDRATRETTSMKTAFSNFQSLVRAFPNSPYSQDAVARMAYIKDSLARHELEIA 192 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 ++Y KR +VA R +L Y DA+ E + + EAY + L A + +I Sbjct: 193 KFYAKRDAWVAVANRVVGMLQQYPDAKATYEGLFLMKEAYEKMGLQQLASQTQQVI 248 >gi|15676601|ref|NP_273745.1| competence lipoprotein [Neisseria meningitidis MC58] gi|18203154|sp|Q9K0B1|COML_NEIMB RecName: Full=Competence lipoprotein ComL; Flags: Precursor gi|7225932|gb|AAF41120.1| competence lipoprotein ComL [Neisseria meningitidis MC58] gi|316983680|gb|EFV62661.1| competence lipoprotein comL [Neisseria meningitidis H44/76] gi|325200612|gb|ADY96067.1| competence lipoprotein comL [Neisseria meningitidis H44/76] Length = 267 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/212 (25%), Positives = 103/212 (48%), Gaps = 10/212 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L N+++A + + FP + A++S L +A+ Y + +A + + Sbjct: 37 KLYAEAQDELNSSNYTRAVKLYEILESRFPTSRHAQQSQLDTAYAYYKDDEKDKALAAID 96 Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168 + +P+ N+DY YL G+ S+ + + D +A + Q + +V+R Sbjct: 97 RFRRLHPQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQR 156 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y A + + L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE Sbjct: 157 FPNSKYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEE 216 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 ++A L AY L A + +++ +P+ Sbjct: 217 SLAILELAYKKLDKPRLAADTRRVLETNFPKS 248 >gi|85711026|ref|ZP_01042086.1| Competence lipoprotein ComL [Idiomarina baltica OS145] gi|85694939|gb|EAQ32877.1| Competence lipoprotein ComL [Idiomarina baltica OS145] Length = 252 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 50/211 (23%), Positives = 101/211 (47%), Gaps = 10/211 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +YE A + NF++A E + + +PF A + L ++ Y ++A + + Sbjct: 37 MYESAQDQMSLGNFTQAEEELSNINSRYPFGPFAHQVQLDLIYLNYKLDNTEKALAAIDR 96 Query: 120 YITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERY 169 +I+ P K+VDY Y+ G++ + + D K + + ++ +Y Sbjct: 97 FISLNPNHKDVDYALYMRGLTNQRAEYNAIHELAGVDRSDRDSTMAKEAFKDFAELLRKY 156 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 S Y A+ + +++LA KE+ + +YY+KR Y+AA R + V+ N+ + E A Sbjct: 157 PESKYAADAKKRMIAIKSRLAKKELAVAQYYMKRQAYLAAANRGRYVVENFENTPEVESA 216 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 +A +VE Y L L + ++ + +++ +P Sbjct: 217 LAMMVECYDQLELEELKQDTLKVLRSNFPNN 247 >gi|238760704|ref|ZP_04621825.1| hypothetical protein yaldo0001_36270 [Yersinia aldovae ATCC 35236] gi|238701077|gb|EEP93673.1| hypothetical protein yaldo0001_36270 [Yersinia aldovae ATCC 35236] Length = 240 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 104/233 (44%), Gaps = 15/233 (6%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 A LV S++DV D+ E+Y A L++ NF A +PF Sbjct: 8 ATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNRYPFG 62 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM------ 144 +++ L + Y + A + + ++ P N+DYV Y+ G++ + Sbjct: 63 PYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDDSALQ 122 Query: 145 ----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 I D + K + +++++ Y NS Y A+ + +N+LA E+ + +YY Sbjct: 123 GFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLVFLKNRLAKHELAVAQYY 182 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 KRG YVA + R + +L +Y D + +A+ + AY L L EA +V +I Sbjct: 183 TKRGAYVAVVNRVEQMLRDYPDTQATHDALPLMENAYKQLQLNAEADKVAKII 235 >gi|88608266|ref|YP_506787.1| putative competence protein ComL [Neorickettsia sennetsu str. Miyayama] gi|88600435|gb|ABD45903.1| putative competence protein ComL [Neorickettsia sennetsu str. Miyayama] Length = 219 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 2/211 (0%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 +C L G S+ + + V + + +Y AVL L+++N+ A E F + + PF+ Sbjct: 6 LCVLSGCGVGKSKKILNNKVRED--ELSMYNSAVLSLEKKNYKVAKELFEKVADIAPFSS 63 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 + K+ + Y GK+ AA E Y+ YP+ + +D V + G +Y QM + Sbjct: 64 IGEKAKASYTKILYDEGKFAAAAGSAEGYLLDYPDGEKMDQVLNIKGNAYFQMSKGCTNS 123 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + +++ + S YV A+ + +A K IG +Y K Y AAI Sbjct: 124 SEFADKARDAFTVLIQTFPASEYVTDAQKKLLEIDEIMAEKIFSIGSFYFKEMSYHAAIA 183 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 RF ++ +YS + + A+++ EAY L + Sbjct: 184 RFDELIRDYSRTKLYDAAVSKRAEAYKMLGI 214 >gi|268593136|ref|ZP_06127357.1| competence lipoprotein ComL [Providencia rettgeri DSM 1131] gi|291311409|gb|EFE51862.1| competence lipoprotein ComL [Providencia rettgeri DSM 1131] Length = 243 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 17/230 (7%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 LVG S+ +V DS E+Y L++ NF A + F +PF A Sbjct: 16 ILVGCS--STPEVSPDSTP-----AEIYATGQQKLQDGNFKAAIKQFEALDNRYPFGPYA 68 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--------- 144 ++ L + Y + + A + + ++ P N+DYV Y+ G++ + Sbjct: 69 QQVQLDLIYAYYKSAELPMAIAAIDRFMRLNPTHPNIDYVLYMRGLTAMALDDSLLQGLF 128 Query: 145 -IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 I D + ++ + S++V Y NS Y A + +++LA ++ + YY KR Sbjct: 129 GIDRSDRDPQHARVAFKDFSQLVRYYPNSLYSNDASKRLVFLKDRLAKFDLSVVEYYNKR 188 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 G YVA + R Q +L +Y D E A+A + AY + L EA +V S+I Sbjct: 189 GAYVAVVNRVQQMLKDYPDTEATRNALAYMEIAYNEMGLNQEANKVASII 238 >gi|149377767|ref|ZP_01895500.1| DNA uptake lipoprotein [Marinobacter algicola DG893] gi|149357939|gb|EDM46428.1| DNA uptake lipoprotein [Marinobacter algicola DG893] Length = 292 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 10/222 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D +V ++ YE A + NF++A + + +PF A ++ L + +Y Sbjct: 38 DKQEEVLPEQTYYENARDAMNSGNFNEAEQNLDYLETYYPFGRYAEQAQLDLIYARYQNL 97 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQMI----RDVPYDQRA-----TKLM 158 + A + + ++ P+S + DY Y+ G+ SY I R P D A + Sbjct: 98 DLEGARAAADRFLRLNPQSDHADYALYMRGLASYNLDIGLAARYFPVDVSARDPGEQRQA 157 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 Q S ++ RY +S Y AR + RN+LA E+ RYY+ R Y+AA R + ++ Sbjct: 158 FQDFSELLNRYPSSEYAPDARQRMIAIRNRLAELELYAARYYISREAYIAANNRARYIIE 217 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 NYS EEA+ L E + + L A + V++++E +P Sbjct: 218 NYSTTPSVEEALIILAETFRFMDLKKGATDAVAMLKENFPDS 259 >gi|255065279|ref|ZP_05317134.1| competence lipoprotein ComL [Neisseria sicca ATCC 29256] gi|255050700|gb|EET46164.1| competence lipoprotein ComL [Neisseria sicca ATCC 29256] Length = 268 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 10/212 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L N+++A + + FP A+++ L +A+ Y + ++A + + Sbjct: 38 KLYAEAHDELNSSNYTRAIKLYEILESRFPNGRYAQQAQLDTAYAYYKDDEPEKALAAID 97 Query: 119 EYITQYPESKNVDYVYYLVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVER 168 + +P+ N+DY YL G+ S+ + + D +A + Q + +V+R Sbjct: 98 RFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQDWSDRDPKANRSAYQAFAELVQR 157 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y S Y A + + L E+ + RYY+KRG Y+AA+ R Q ++ Y + + EE Sbjct: 158 YPESKYAADATERMAKLVDALGGNEISVARYYMKRGAYLAAVNRAQKIVERYQNTRYVEE 217 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 ++A + AY L A + +++ +PQ Sbjct: 218 SLAMMELAYKKLDKPQLAADTRRVLETNFPQS 249 >gi|134095126|ref|YP_001100201.1| TPR repeat-containing protein [Herminiimonas arsenicoxydans] gi|133739029|emb|CAL62077.1| Competence lipoprotein ComL precursor [Herminiimonas arsenicoxydans] Length = 261 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 17/243 (6%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRY--QREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 IA+ FL+ S+ + D + + + ++Y +A + N+ KA +F + + Sbjct: 7 IALAFLL-----SACSLTPDQIDETKNWSPSKLYSEAREEMNTGNYEKAVSHFEKLESRY 61 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-------- 139 PF A+++ + A+ Y G QA + E +I +P+ NVDY+YYL G+ Sbjct: 62 PFGTYAQQAQMEIAYAYYRQGDQPQALAAVERFIKLHPDHPNVDYMYYLRGLINFNDKVS 121 Query: 140 SYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + R P D +A + + ER+ +S Y A + N +A +V + Sbjct: 122 VFDFLSRQDPTERDPKAAREAFDSFKLLTERFPDSKYTPDASARLAYLVNAMAQYDVHVA 181 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 YY +RG Y+AA R Q + NY A AE A+ ++++Y AL L + +++ + Sbjct: 182 NYYYRRGAYLAAANRAQAAVKNYPGAPAAEGALYVMIQSYDALNLPQLRDDAERVMKTNF 241 Query: 258 PQG 260 P Sbjct: 242 PNS 244 >gi|330974765|gb|EGH74831.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. aceris str. M302273PT] Length = 174 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 10/166 (6%) Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ-- 143 +PF A ++ L + Y G+ + A S E +I +P+ NVDY YY+ G+ S+ Q Sbjct: 9 YPFGRYADQAQLELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDV 68 Query: 144 --MIRDVPYDQR-----ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 + R +P DQ A + +++ R+ NS Y A+ + RN LA+ E+ + Sbjct: 69 GLLARFLPLDQTKRDPGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHV 128 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 YYL R YVAA R + V+ N+ + + +A +VE+Y L L Sbjct: 129 ADYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQRLHL 174 >gi|212712903|ref|ZP_03321031.1| hypothetical protein PROVALCAL_04000 [Providencia alcalifaciens DSM 30120] gi|212684448|gb|EEB43976.1| hypothetical protein PROVALCAL_04000 [Providencia alcalifaciens DSM 30120] Length = 239 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y L++ N++ A + F +PF A++ L + Y + + A + + Sbjct: 31 EIYSTGQQKLQDGNYNAAIKQFEALDNRYPFGPYAQQVQLDLIYAYYKSAELPMAIASID 90 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 ++ P N+DYV Y+ G++ + I D + + + +S++V Sbjct: 91 RFMRLNPTHPNIDYVLYMRGLTAMALDDSMLQGFFGIDRSDRDPQHALVAFKDLSQLVRY 150 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NSPY A + +++LA ++ + YY KRG YVA + R Q +L +Y D E + Sbjct: 151 YPNSPYSNDASKRLVYLKDRLAKFDLSVVEYYNKRGAYVAVVNRVQQMLRDYPDTEATRQ 210 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + L EA +V S+I Sbjct: 211 ALTYMEIAYKEMGLDKEANKVGSII 235 >gi|326796214|ref|YP_004314034.1| outer membrane assembly lipoprotein YfiO [Marinomonas mediterranea MMB-1] gi|326546978|gb|ADZ92198.1| outer membrane assembly lipoprotein YfiO [Marinomonas mediterranea MMB-1] Length = 280 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 52/221 (23%), Positives = 109/221 (49%), Gaps = 13/221 (5%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++E Y+KA L + A ++ + +PF + ++ L + QY +G Y + + Sbjct: 35 EQEYYDKAQEALDNGLPATAVKHLKDLTARYPFGDFSTRAELDLIYAQYESGDYIASHAT 94 Query: 117 GEEYITQYPESKNVDYVYYLVGMS--------YAQMIRDVPYDQRATKLMLQY--MSRIV 166 E +I + +S +DY YY+ G+S + + P ++ A + + + + Sbjct: 95 AERFIRNHLDSDALDYAYYMRGLSTYKGAETFLGRYLDLNPAERDAHEFEKAFGEFADFL 154 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 R+ SPY A+ + RN +A E+++ YY KR ++A+ R Q V+ +Y + Sbjct: 155 ARFPKSPYAVDAKARMIYLRNTVADHELQVAHYYFKRHAPISALRRAQEVIQHYPSSNSV 214 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 EEA+A ++AY+ + + A+ + ++ + YP ++Y++ Sbjct: 215 EEAIAVTIQAYLNMEQYELAKTNLGVLTKNYPN---SKYID 252 >gi|59711170|ref|YP_203946.1| lipoprotein component of outer membrane protein assembly complex [Vibrio fischeri ES114] gi|197334835|ref|YP_002155321.1| competence lipoprotein ComL [Vibrio fischeri MJ11] gi|59479271|gb|AAW85058.1| lipoprotein component of outer membrane protein assembly complex [Vibrio fischeri ES114] gi|197316325|gb|ACH65772.1| competence lipoprotein ComL [Vibrio fischeri MJ11] Length = 241 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 17/240 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LTI +AV LVG SS D D + D+ E+Y +A + L+ N++ A E Sbjct: 4 LTISSLLAVSLLVGC---SSSD---DVIPDIP-PSELYAQAQVSLQAGNWTSAIERLEAL 56 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF + + L +V Y + E + P D+V Y+ G+++ Sbjct: 57 DSRYPFGAYSEQVQLDLIYVYYKNDDLALGLATIERFTRLNPTHPKADWVLYMRGLTHMA 116 Query: 144 MIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 R +D + + R++ERY NS Y + A+ + +N+LA E Sbjct: 117 QDRSFMHDLFRVDRSDRDPEPARSAFKDFKRLLERYPNSLYAEDAQTRMYALKNRLADYE 176 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +YL+R +++AI R Q + Y D E A +++ ++ AY L L D + LI Sbjct: 177 LATADFYLRREAWISAINRCQELQRTYPDTEAARKSLTIMLSAYKELKLEDAIKRTEELI 236 >gi|303257042|ref|ZP_07343056.1| competence lipoprotein ComL [Burkholderiales bacterium 1_1_47] gi|302860533|gb|EFL83610.1| competence lipoprotein ComL [Burkholderiales bacterium 1_1_47] Length = 283 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 10/218 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L E N+ A +Y+ + +P+ ++++ + +A+ + G+ QQA ++ + Sbjct: 45 KLYVEARDNLNEGNYETARDYYQKLEARYPYGRYSQQAQVETAYSYFKEGEPQQAIAVCD 104 Query: 119 EYITQYPESKNVDYVYYLVG----------MSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 ++ QYPE Y Y+ G MSY D +A + +V R Sbjct: 105 RFLRQYPEHPLSPYALYIKGIATLDEDEGWMSYLTRQDLSKRDAQAARDAFDIFKELVLR 164 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y + AR + A E+ +YY R Y+AAI R + VL N+ + AEE Sbjct: 165 FPNSRYARDARERMHELVEAQAKYEINTAKYYYVRDAYIAAINRAENVLLNFQTSPQAEE 224 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 A+ + ++Y L + D+A ++ ++ +G + Y+ Sbjct: 225 ALIIMRDSYNKLGMDDKAADIQRILDANKNRGSYDTYL 262 >gi|134301740|ref|YP_001121708.1| lipoprotein [Francisella tularensis subsp. tularensis WY96-3418] gi|134049517|gb|ABO46588.1| hypothetical lipoprotein [Francisella tularensis subsp. tularensis WY96-3418] Length = 274 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 10/211 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA ++ Q + A + +PF +A K ++ +V Y + A +LG++ Sbjct: 40 IYAKAHEQMQNQKYFDAIRSYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQ 99 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDV-----PYD---QRATKLMLQYMS--RIVERY 169 +I +P S YVYY++G+ + R + PYD T Y + + ++ Sbjct: 100 FIKMHPYSIYKGYVYYMIGVVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLD 159 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 +V A+ + N +A +I +Y KRG Y AAI R V+ NY + E+A Sbjct: 160 PTGSFVPDAKRRMIFINNIIARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDA 219 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + AY L L D+A+ + ++++ YP+ Sbjct: 220 LVLTIRAYNKLGLYDQAKANIRVLKKNYPKN 250 >gi|317493977|ref|ZP_07952394.1| outer membrane assembly lipoprotein YfiO [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918304|gb|EFV39646.1| outer membrane assembly lipoprotein YfiO [Enterobacteriaceae bacterium 9_2_54FAA] Length = 245 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 15/224 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS+D D+ E+Y A L++ NF A +PF +++ L Sbjct: 22 SSKDAVPDNPP-----SEIYATAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQVQLDLI 76 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151 + Y + A + + ++ P N+DYV Y+ G++ + I D Sbjct: 77 YAYYKSADLPMAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDDSALQGFFGIDRSDRD 136 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + S++V+RY NS Y A + +++LA E+ + +YY KRG YVA + Sbjct: 137 PEHARQAFRDFSQLVQRYPNSQYSADATKRLVYLKDRLAKYELSVAQYYTKRGAYVAVVN 196 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 R + +L NY D + +A+ + AY + L +A +V +I E Sbjct: 197 RVENMLRNYPDTQATRDALPLMENAYKQMNLTAQADKVAKIIAE 240 >gi|290476242|ref|YP_003469142.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain [Xenorhabdus bovienii SS-2004] gi|289175575|emb|CBJ82378.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain [Xenorhabdus bovienii SS-2004] Length = 244 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 13/216 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D+V D+ Q ++Y L+E N+ A + +PF ++++ L + Y + Sbjct: 26 DAVPDIP-QSQIYSAGQKHLQEGNYKGAIKQLESLDNRYPFGPYSQQTQLDLIYAYYKSA 84 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-----------DQRATKL 157 ++ A + + ++ P N+DYV YL + +Q + D D + Sbjct: 85 EFPMALASIDRFMRLNPTHPNIDYVIYLRAL-ISQALDDNTLQSFFGIDRSDRDPEHARA 143 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + + +V RY NS Y A + + +LA E+ + +YY KR YVA + R + +L Sbjct: 144 SFRDFNLLVSRYPNSQYTSDAAKRLVFLKERLAKYELAVVKYYTKRSAYVAVVSRVEQML 203 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +Y D + EA+ + +Y L LM EA +V LI Sbjct: 204 RDYPDTQATREALPYMEASYKELGLMAEADKVAKLI 239 >gi|301154794|emb|CBW14257.1| predicted lipoprotein [Haemophilus parainfluenzae T3T1] Length = 263 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 102/237 (43%), Gaps = 24/237 (10%) Query: 28 FSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 F+IA C E Q+S D E+Y K L+E ++S + Y + Sbjct: 15 FAIAACSSGNKEVEQASVD-------------ELYAKGAAALQEGSYSDSIRYLKAATER 61 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY----A 142 FP + +++L + Y Y + ++ Q+P+S N DY Y+ G++ Sbjct: 62 FPGSTYQEQAMLDLIYANYKTQDYTATLVTVDNFLQQFPQSPNRDYAVYMAGLTNLATAD 121 Query: 143 QMIRDVPYDQRAT------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 MI+D RAT K +V + NSPY + A + ++ LA E+EI Sbjct: 122 NMIQDFFGIDRATRETTSMKTAFSNFQSLVRAFPNSPYSQDAVARMAYIKDSLARHELEI 181 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 ++Y KR +VA R +L Y DA+ E + + EAY + L A + +I Sbjct: 182 AKFYAKRDAWVAVSNRVVGMLQQYPDAKATYEGLFLMKEAYEKMGLQQLANQTQQVI 238 >gi|189426001|ref|YP_001953178.1| outer membrane assembly lipoprotein YfiO [Geobacter lovleyi SZ] gi|189422260|gb|ACD96658.1| outer membrane assembly lipoprotein YfiO [Geobacter lovleyi SZ] Length = 248 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 51/204 (25%), Positives = 96/204 (47%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y + ++ + +A E + + FP +A ++ + A + + +A + E Sbjct: 33 ELYAQGETAFQKSRYEQAVESWKKVKETFPEPELAARAEIGIANAYFLNHDFIEAGAAYE 92 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 ++ +P + + Y G++ +I + DQ TK L + +Y S YV Sbjct: 93 DFRKLHPTHELAQFSLYRQGLASFNLITGIDTDQTPTKNALALFESFIRQYPKSQYVAKV 152 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + R +LA E+ +GR+Y + Y AAI RF+ L N+ D +E + L +AY+ Sbjct: 153 QEKIADCRGKLAQYEIYVGRFYYRTDNYQAAIGRFEGALTNFPDYTGNDETLFYLAKAYI 212 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 A D+A+ V+S + YP G + Sbjct: 213 ANRQSDKAQTVLSRLIREYPTGKY 236 >gi|87119408|ref|ZP_01075305.1| competence lipoprotein ComL, putative [Marinomonas sp. MED121] gi|86164884|gb|EAQ66152.1| competence lipoprotein ComL, putative [Marinomonas sp. MED121] Length = 280 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 93/182 (51%), Gaps = 10/182 (5%) Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY----- 141 +PF +++ L + + A Y A + E +I +YPE + +DYVYY +S Sbjct: 65 YPFGEFTQRAELEIIYAYFLASDYISAHANAERFIKKYPEFETIDYVYYYRALSTFKGGE 124 Query: 142 ---AQMIRDVPYDQRATKLMLQY--MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 + + P + +++ + + + +++R+ S Y A+ + RN +A E+++ Sbjct: 125 TLSTRYLNQDPSQRDSSEFIKAFREFADLLKRFPESSYASDAKARMIYLRNTIARHELQV 184 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +YY KR +AA+ R Q VL Y ++ E+A+A ++AY+ L + A + ++++ Sbjct: 185 AKYYFKRNAPLAALHRSQTVLNKYPSSDSVEDALAINIQAYIELEQFELADQNLAILTNN 244 Query: 257 YP 258 YP Sbjct: 245 YP 246 >gi|148653371|ref|YP_001280464.1| DNA uptake lipoprotein-like protein [Psychrobacter sp. PRwf-1] gi|148572455|gb|ABQ94514.1| DNA uptake lipoprotein-like protein [Psychrobacter sp. PRwf-1] Length = 393 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 70/248 (28%), Positives = 110/248 (44%), Gaps = 23/248 (9%) Query: 27 FFSIAVC-FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 S+ C L + S V TD +Y Y++AV + + + A E + Sbjct: 34 LLSLTGCQTLKNITGKDSDTVATAEKTDAQY----YQEAVKAMDKGRYIYASEQLTELRT 89 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG------- 138 +P A ++LL + Q+ Y+ AA+ E++I YP + VDY YY+ G Sbjct: 90 FYPTGAYAEQALLDLMYSQFQTKDYELAATSAEQFIKLYPRNPQVDYAYYVRGVANMHAG 149 Query: 139 ----MSYAQM---IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 +S A+M RD Y +L ++ R+ NS Y A +T NQ A Sbjct: 150 TSSLLSIARMQQADRDTSY----YRLAFSNFQDLLSRFPNSSYAPDAAQRMTYIYNQFAE 205 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 E+ R+Y+KR YVAA R + V Y ++ E++A L + L L D A + + Sbjct: 206 SELSAARWYIKREAYVAAANRAKWVFQYYPLSQQIPESIAILAYSNEQLGLTDLANQYKT 265 Query: 252 LIQERYPQ 259 L+Q YP+ Sbjct: 266 LLQINYPE 273 >gi|255318858|ref|ZP_05360084.1| DNA uptake lipoprotein [Acinetobacter radioresistens SK82] gi|262378884|ref|ZP_06072041.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|255304114|gb|EET83305.1| DNA uptake lipoprotein [Acinetobacter radioresistens SK82] gi|262300169|gb|EEY88081.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 343 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 74/259 (28%), Positives = 121/259 (46%), Gaps = 27/259 (10%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSK 75 Y++ AL++ + A LVG ++V +D T + +VY KA L+ +S Sbjct: 6 YKVTMLALSLGIASA---LVGCSSNPKKEV-VD--TGPQSSEQVYFNKAERALERGQYSD 59 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + FP A+++ L +V++ Y+ A +L E +I P+ NVDY YY Sbjct: 60 AAKQLEALDTYFPTGQYAQQAQLELLYVKFQQKDYEGAIALAERFIRLNPQHPNVDYAYY 119 Query: 136 LVGM--------------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARF 180 + G+ S Q RDV Y K+ Q + RY +S Y V A+ Sbjct: 120 VRGVANMEQNYDGLLRYTSLQQSHRDVSY----LKVAYQNFVDFIRRYPSSQYAVDAAQR 175 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 +G+ +LA E+ + RY LKR +VAA+ R Q V+ +Y EA+A + AY L Sbjct: 176 MKFIGQ-ELAENEMNVARYNLKRKAWVAALERAQWVVEHYPQTPQIPEALATMAYAYDKL 234 Query: 241 ALMDEAREVVSLIQERYPQ 259 +++ V +++ YP+ Sbjct: 235 GDQASSQQYVEVLKLNYPE 253 >gi|319943654|ref|ZP_08017935.1| competence lipoprotein ComL [Lautropia mirabilis ATCC 51599] gi|319742887|gb|EFV95293.1| competence lipoprotein ComL [Lautropia mirabilis ATCC 51599] Length = 359 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 14/213 (6%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y A L N++ A + + +PF A+++ L A+ Y G +A S + Sbjct: 82 QLYADAKADLDAGNWTSAIKGMERLESRYPFGSYAQQAQLDIAWAHYKEGDRAEALSAID 141 Query: 119 EYITQYPESKNVDYVYYLVGM----SYAQMI-----RDVP-YDQRATKLMLQYMSRIVER 168 +I +P + +DY YYL G+ + +I +D D AT+ ++V R Sbjct: 142 RFIRLHPAHERLDYAYYLKGLVNFSNGTGLIARWAGQDASERDLAATREAYDAFQQVVNR 201 Query: 169 YTNSPYVKG--ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + S Y + AR V N +A+ EV + R+YL RG YVA+ R Q VL++Y Sbjct: 202 FPQSRYREDSIARMRSLV--NSMASGEVHVARFYLSRGAYVASANRAQGVLSSYQGTPAT 259 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 E+A+ L +Y L L D + V ++ +PQ Sbjct: 260 EDALNILATSYDRLNLPDLRDDTVRVLARTWPQ 292 >gi|329123817|ref|ZP_08252375.1| NrfG protein [Haemophilus aegyptius ATCC 11116] gi|327469304|gb|EGF14775.1| NrfG protein [Haemophilus aegyptius ATCC 11116] Length = 272 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 16/222 (7%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 S+DV SV E+Y K L+E ++S+A Y + FP + +++L Sbjct: 32 GSKDVEQASVN------ELYTKGTTSLQEGSYSEAIRYLKATTERFPGSIYQEQAMLDLI 85 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYDQRAT-- 155 + Y A Y Q + + ++ Q+P+S N Y Y+ G++ A I+D RAT Sbjct: 86 YANYKAQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGIDRATRE 145 Query: 156 ----KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + +V + NSPY + A + ++ LA E+EI ++Y KR +VA Sbjct: 146 TTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKAWVAVAN 205 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 R +L Y D + E + + EAY + L A + +I Sbjct: 206 RVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKII 247 >gi|319775953|ref|YP_004138441.1| lipoprotein [Haemophilus influenzae F3047] gi|319898142|ref|YP_004136339.1| lipoprotein [Haemophilus influenzae F3031] gi|317433648|emb|CBY82033.1| predicted lipoprotein [Haemophilus influenzae F3031] gi|317450544|emb|CBY86761.1| predicted lipoprotein [Haemophilus influenzae F3047] Length = 262 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 16/222 (7%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 S+DV SV E+Y K L+E ++S+A Y + FP + +++L Sbjct: 22 GSKDVEQASVN------ELYTKGTTSLQEGSYSEAIRYLKATTERFPGSIYQEQAMLDLI 75 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYDQRAT-- 155 + Y A Y Q + + ++ Q+P+S N Y Y+ G++ A I+D RAT Sbjct: 76 YANYKAQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGIDRATRE 135 Query: 156 ----KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + +V + NSPY + A + ++ LA E+EI ++Y KR +VA Sbjct: 136 TTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKAWVAVAN 195 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 R +L Y D + E + + EAY + L A + +I Sbjct: 196 RVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKII 237 >gi|317485235|ref|ZP_07944116.1| outer membrane assembly lipoprotein YfiO [Bilophila wadsworthia 3_1_6] gi|316923526|gb|EFV44731.1| outer membrane assembly lipoprotein YfiO [Bilophila wadsworthia 3_1_6] Length = 240 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 13/216 (6%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +E+YE A ++E+N+S+A +Y+ + +FPF+ ++ L + GKY +AA Sbjct: 34 QELYEGANDAMQEKNYSQAAQYYTKLKDNFPFSPYTVEAELSLGDAFFLDGKYPEAAEAY 93 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 +E+ + +P + + YV Y VGMS + V +T+ L++ R+ E Y NS Y + Sbjct: 94 KEFESLHPRHEAIPYVLYQVGMSNLKSFISVDRPTTSTQEALEFFGRLRETYPNSEYAQK 153 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD----AEHAEEAMARL 233 + + R LA E+ +G + Y A R+ ++ N+ D + HA+E Sbjct: 154 SVEEMKNCRRLLAEHELYLGDVFWNMNNYGPAWRRYTYIVDNFPDVPEVSAHAKEK---- 209 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 AL+ RE S QG W R+ + L Sbjct: 210 -----ALSAYYRYREQQSQKAREQIQGSWKRWFDWL 240 >gi|167627647|ref|YP_001678147.1| competence lipoprotein ComL [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241668215|ref|ZP_04755793.1| competence lipoprotein ComL [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876750|ref|ZP_05249460.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167597648|gb|ABZ87646.1| competence lipoprotein ComL [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254842771|gb|EET21185.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 274 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 13/220 (5%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA ++ + + A + +PF +A K ++ +V Y + A +LG++ Sbjct: 40 IYAKAHEQMQNEKYFDAIRSYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQ 99 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDV-----PYD---QRATKLMLQYMS--RIVERY 169 +I YP S YVYY++G+ + R + PYD T Y++ + ++ Sbjct: 100 FIKMYPYSSYKGYVYYMIGVVGFEDGRGILQTYAPYDMNYHDPTGYQDAYVNFEKAIKLD 159 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 +V A+ + N +A +I ++Y KRG Y AA+ R ++ NY + ++A Sbjct: 160 PKGSFVPDAKRRMIYINNIIAEHYYDIAKFYYKRGAYNAALDRASQIIRNYPQSTVTQDA 219 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 + + AY L L D+A++ + ++++ YP+ ++V L Sbjct: 220 LVLTIRAYNKLGLYDQAKDNIRVLKKNYPKN---KFVNNL 256 >gi|330999931|ref|ZP_08323629.1| outer membrane assembly lipoprotein YfiO [Parasutterella excrementihominis YIT 11859] gi|329573338|gb|EGG54950.1| outer membrane assembly lipoprotein YfiO [Parasutterella excrementihominis YIT 11859] Length = 254 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 10/218 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L E N+ A +Y+ + +P+ ++++ + +A+ + G+ QQA ++ + Sbjct: 16 KLYVEARDNLNEGNYETARDYYQKLEARYPYGRYSQQAQVETAYSYFKEGEPQQAIAVCD 75 Query: 119 EYITQYPESKNVDYVYYLVG----------MSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 ++ QYPE Y Y+ G MSY D +A + +V R Sbjct: 76 RFLRQYPEHPLSPYALYIKGIATLDEDEGWMSYLTRQDLSKRDAQAARDAFDIFKELVLR 135 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y + AR + A E+ +YY R Y+AAI R + VL N+ + AEE Sbjct: 136 FPNSRYARDARERMHELVEAQAKYEINTAKYYYVRDAYIAAINRAENVLLNFQTSPQAEE 195 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 A+ + ++Y L + D+A ++ ++ +G + Y+ Sbjct: 196 ALIIMRDSYNKLGMDDKAADIQRILDANKNRGSYDTYL 233 >gi|152977724|ref|YP_001343353.1| TPR repeat-containing protein [Actinobacillus succinogenes 130Z] gi|150839447|gb|ABR73418.1| TPR-repeat-containing protein [Actinobacillus succinogenes 130Z] Length = 270 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/208 (24%), Positives = 98/208 (47%), Gaps = 10/208 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++E++ K +++E N+S A +Y FP + + ++ L + Y Y A Sbjct: 31 EQELFTKGQAYVQEGNYSDATKYLQAVDSRFPGSDYSEQAELNLIYAAYRNQDYTTALVT 90 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQM----IRDVPYDQRAT------KLMLQYMSRIV 166 + ++ +P+S++ DYV Y+ ++ M I+D RA+ K +V Sbjct: 91 ADRFLQLHPQSQHTDYVLYMAALTNMSMGDNFIQDFFGIDRASRESTSMKTAFGNFQTLV 150 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + + NSPY A + +++LA E+EI ++Y KR +VA R +L Y D Sbjct: 151 QHFPNSPYTPDAITRMAYIKDRLARHELEIAKFYAKRNAWVAVSNRVTGMLQTYPDTNAT 210 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQ 254 +A+ L +AY + L ++ +L++ Sbjct: 211 LQALPLLEKAYHEMGLTQLEQKAATLVK 238 >gi|319778231|ref|YP_004129144.1| component of the lipoprotein assembly complex protein [Taylorella equigenitalis MCE9] gi|317108255|gb|ADU91001.1| component of the lipoprotein assembly complex protein [Taylorella equigenitalis MCE9] Length = 256 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/212 (24%), Positives = 104/212 (49%), Gaps = 12/212 (5%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y+ A +++ +++ A +Y P++ A+++++ A+V + + ++A ++ + Sbjct: 21 KLYDTARTYVRGRDWDSARKYLAAIENRHPYSSYAQQAMIDEAYVNWKDEQPERAIAVID 80 Query: 119 EYITQYPESKNVDYVYYLVGM-----------SYAQMIRDVPYDQRATKLMLQYMSRIVE 167 ++ YP +Y+ YL G+ S+A + D R + +++ Sbjct: 81 RFLQIYPSHPGTEYMLYLKGLITFTPPTHFLTSFAGQ-KPSERDPRGLRQSYTAFKVLID 139 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y NS Y AR + LA E + +YY ++ YVAAI R Q+VL +S AE Sbjct: 140 NYPNSRYAADARQRLVWLVTTLAEHEANVAKYYYEKKAYVAAINRAQVVLTEFSGVPSAE 199 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 A+ L+++Y AL D+A + S++ + YP Sbjct: 200 LALYVLMKSYEALGSEDQAADAKSVLVKNYPN 231 >gi|238752928|ref|ZP_04614390.1| hypothetical protein yrohd0001_38840 [Yersinia rohdei ATCC 43380] gi|238708836|gb|EEQ01092.1| hypothetical protein yrohd0001_38840 [Yersinia rohdei ATCC 43380] Length = 240 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 15/233 (6%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 A LV S++DV D+ E+Y A L++ NF A +PF Sbjct: 8 ATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNRYPFG 62 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM------ 144 +++ L + Y + A + + ++ P N+DYV Y+ G++ + Sbjct: 63 PYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDDSALQ 122 Query: 145 ----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 I D + K + +++++ Y NS Y A+ + +++LA E+ + +YY Sbjct: 123 GFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLMFLKDRLAKHELAVAQYY 182 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 KRG YVA + R + +L +Y D + +A+ + AY L L EA +V +I Sbjct: 183 TKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLTAEADKVAKII 235 >gi|120553809|ref|YP_958160.1| DNA uptake lipoprotein [Marinobacter aquaeolei VT8] gi|120323658|gb|ABM17973.1| DNA uptake lipoprotein [Marinobacter aquaeolei VT8] Length = 277 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 100/209 (47%), Gaps = 10/209 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A + NF++A + + +PF A ++ L F +Y + + + + + Sbjct: 35 YENAREAMNSGNFNEAEQNLDALETYYPFGRYAEQAQLDLIFARYQNLDLEGSRAAADRF 94 Query: 121 ITQYPESKNVDYVYYLVGMSYAQM-----IRDVPYDQRATKLMLQY-----MSRIVERYT 170 I P+S+++DY Y+ G++ + R P D A Q S+++ R+ Sbjct: 95 IRLNPQSEHLDYALYMRGLASYNLDLGLATRYFPVDAAARNPGEQLQAFRDFSQLLNRFP 154 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 +S Y AR + RN++A E+ RYY+KR YVAA R + V+ NY + EEA+ Sbjct: 155 DSDYALDARQRMIAIRNRMAELELHAARYYIKREAYVAANNRARYVVENYPSSPSVEEAL 214 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQ 259 + + + L L A + ++ +++ +P Sbjct: 215 MIMADTFRFLELKKGANDAIATLRKNFPN 243 >gi|33151687|ref|NP_873040.1| putative lipoprotein [Haemophilus ducreyi 35000HP] gi|18203223|sp|Q9L7A6|Y470_HAEDU RecName: Full=UPF0169 lipoprotein HD_0470; Flags: Precursor gi|6942293|gb|AAF32395.1|AF224466_2 hypothetical lipoprotein [Haemophilus ducreyi] gi|33147908|gb|AAP95429.1| conserved putative lipoprotein [Haemophilus ducreyi 35000HP] Length = 260 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 10/163 (6%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----IRDVPYDQRATKL 157 F Y G+Y +A SL E ++ YP S N+DYV+YLVG+S ++ I+D + R+++ Sbjct: 79 FAHYKTGEYYKALSLAERFVRAYPNSNNMDYVHYLVGLSNVRLGDNFIQDFFHVNRSSRT 138 Query: 158 MLQYMS------RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + IV Y S YV A+ ++ N++A E+ I ++Y KR VA + Sbjct: 139 IESIRNAYGNFQMIVRIYPQSQYVNDAQQWMVYLLNRMAEHELSIVKFYDKRDASVAVVN 198 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 R + +L Y ++ +A+ + +AY + L D +V LI+ Sbjct: 199 RVEEMLRFYPASKSTFDALPYMQKAYQRMGLKDSEAKVAELIE 241 >gi|226328714|ref|ZP_03804232.1| hypothetical protein PROPEN_02609 [Proteus penneri ATCC 35198] gi|225201900|gb|EEG84254.1| hypothetical protein PROPEN_02609 [Proteus penneri ATCC 35198] Length = 244 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 17/233 (7%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 V L+ S +D D E+Y + L + N+ A + +PF Sbjct: 13 VSLLLAGCSSSDKDATADMSP-----SELYSTSQEKLLDGNYGAAIKQLESLDNRYPFGP 67 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY- 150 +++ L + Y + + A S + ++ P N+DYV Y+ G++ AQ + D Sbjct: 68 YSQQVQLDLIYAYYKSAELPMAISAIDRFMRLNPTHPNIDYVLYMRGLT-AQALDDSALQ 126 Query: 151 ----------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 D + + + S++V Y +S Y A + +N+LA E+ + ++Y Sbjct: 127 GFFGIDRSDRDPQHAIVAFKDFSQLVRYYPDSLYAADATKRLVFLKNRLAKYELSVAKFY 186 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 KRG YVA I R + ++ +Y D + +A+ + AY L L EA +V SLI Sbjct: 187 TKRGAYVAVINRVEQMMRDYPDTQATRDALVYMENAYKELGLTQEAEKVASLI 239 >gi|261346209|ref|ZP_05973853.1| competence lipoprotein ComL [Providencia rustigianii DSM 4541] gi|282565515|gb|EFB71050.1| competence lipoprotein ComL [Providencia rustigianii DSM 4541] Length = 242 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y L++ N+S A + F +PF A++ L + Y + + A + + Sbjct: 34 EIYSTGQQKLQDGNYSAAIKQFEALDNRYPFGPYAQQVQLDLIYAYYKSAELPMAIATID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 ++ P N+DYV Y+ G++ + I D + + + +S++V Sbjct: 94 RFMRLNPTHPNIDYVLYMRGLTAMALDDSMLQGFFGIDRSDRDPQHALVAFKDLSQLVRY 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA ++ + YY KRG YVA + R Q +L +Y D E + Sbjct: 154 YPNSQYSNDASKRLVYLKDRLAKFDLSVVEYYNKRGAYVAVVNRVQQMLRDYPDTEATRK 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + L +EA +V S++ Sbjct: 214 ALTYMEIAYKEMGLDNEANKVASIL 238 >gi|262369408|ref|ZP_06062736.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262315476|gb|EEY96515.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 327 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 118/257 (45%), Gaps = 25/257 (9%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSK 75 Y++ ALTI + A +VG ++V +D T + +VY +KA L+ ++ Sbjct: 6 YKMTMLALTIGIASA---MVGCSSNPKKEV-VD--TGPQSSEQVYIQKAEKALQSGQYTD 59 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A ++ +P A+++ L +V++ Y+ A +L + +I P+ NVDY YY Sbjct: 60 AAKHLEALDTYYPTGEYAQQAQLELLYVKFQQKDYEGAIALADRFIRLNPQHPNVDYAYY 119 Query: 136 LVGM--------------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + G+ S Q RDV Y K+ Q + RY +S Y A Sbjct: 120 VRGVANMEQNYDGLIRYTSLKQAHRDVSY----LKVAYQNFVDFIRRYPSSTYAVDAAQR 175 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 + N+LA E+ R+ +KR +VAA+ R Q V+ +Y + EA+A + +Y L Sbjct: 176 MKFISNELAESEMNAARFNIKRKAWVAALERAQWVIEHYPQSPQVPEALATVAYSYDQLG 235 Query: 242 LMDEAREVVSLIQERYP 258 A++ +++ YP Sbjct: 236 DKQTAQQYTDVLKLNYP 252 >gi|145635281|ref|ZP_01790984.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittAA] gi|145267425|gb|EDK07426.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittAA] Length = 262 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 16/221 (7%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S+DV SV E+Y K L+E ++S+A Y + FP + +++L + Sbjct: 23 SKDVEQASVN------ELYTKGTTSLQEGSYSEAIRYLKATTERFPSSVYQEQAMLDLIY 76 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYDQRAT--- 155 Y Y Q + + ++ Q+P+S N Y Y+ G++ A I+D RAT Sbjct: 77 ANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGIDRATRET 136 Query: 156 ---KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + +V + NSPY + A + ++ LA E+EI ++Y KR +VA R Sbjct: 137 TSMRTAFSNFQNLVRVFPNSPYAQDALARMAYIKDALARHELEIAKFYAKRKAWVAVANR 196 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +L Y D + E + + EAY + L A + +I Sbjct: 197 VVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKII 237 >gi|301064420|ref|ZP_07204845.1| outer membrane assembly lipoprotein YfiO [delta proteobacterium NaphS2] gi|300441502|gb|EFK05842.1| outer membrane assembly lipoprotein YfiO [delta proteobacterium NaphS2] Length = 240 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 79/164 (48%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+ + + + F+KA E F + +P++ A + L A Y G+Y +A Sbjct: 41 EIMNEGMADFNDGKFTKAIETFQKIKDRYPYSTFALTAELKMADALYEKGEYDEARDEYA 100 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 E+ +P +KNV YV Y GM Y + DQ T + R+++R+ S Y + A Sbjct: 101 EFEKMHPRNKNVPYVLYRQGMCYFNKSAAIDRDQSDTFKAREEFERLIKRFRKSDYTEQA 160 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 R V +LA E+ +G +Y +G+Y A+ R+ ++ +Y D Sbjct: 161 RRKVRECYIKLAEHELYVGNFYFTKGKYETAMARYLYLIDHYPD 204 >gi|68248782|ref|YP_247894.1| hypothetical protein NTHI0266 [Haemophilus influenzae 86-028NP] gi|68056981|gb|AAX87234.1| conserved hypothetical lipoprotein [Haemophilus influenzae 86-028NP] Length = 262 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 16/222 (7%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 S+DV SV E+Y K L+E ++S+A Y + FP + +++L Sbjct: 22 GSKDVEQASVN------ELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQAMLDLI 75 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYDQRAT-- 155 + Y Y Q + + ++ Q+P+S N Y Y+ G++ A I+D RAT Sbjct: 76 YANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGIDRATRE 135 Query: 156 ----KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + +V + NSPY + A + ++ LA E+EI ++Y KR +VA Sbjct: 136 TTSMRTAFSNFQNLVRVFPNSPYAQDALARMAYIKDALARHELEIAKFYAKRKAWVAVAN 195 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 R +L Y D + E + + EAY + L A + +I Sbjct: 196 RVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKII 237 >gi|148827315|ref|YP_001292068.1| hypothetical protein CGSHiGG_03480 [Haemophilus influenzae PittGG] gi|148718557|gb|ABQ99684.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittGG] Length = 262 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 16/221 (7%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S+DV SV E+Y K L+E ++S+A Y + FP + +++L + Sbjct: 23 SKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSIYQEQAMLDLIY 76 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----QRAT--- 155 Y Y Q + ++ Q+P+S N Y Y+ G++ A +V D RAT Sbjct: 77 ANYKTQDYTQVLLTVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNVIQDFFGIDRATRET 136 Query: 156 ---KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + +V + NSPY + A + ++ LA E+EI ++Y KR +VA R Sbjct: 137 TSMRTAFSNFQNLVRAFPNSPYSQDALARMAYIKDALARHELEIAKFYTKRKAWVAVANR 196 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +L Y D + E + + EAY + L A + +I Sbjct: 197 VVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKII 237 >gi|304414307|ref|ZP_07395675.1| outer membrane protein assembly complex [Candidatus Regiella insecticola LSR1] gi|304283521|gb|EFL91917.1| outer membrane protein assembly complex [Candidatus Regiella insecticola LSR1] Length = 246 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 27/228 (11%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 +S DV DS E+Y A L+ NF A +PF+ + + Sbjct: 22 NSNDVVPDSPP-----TELYTDAQQKLQSGNFQGAITQLEALDSRYPFSAYSSQVQFDLI 76 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML-- 159 + Y + A + ++ P N+DY+ YL G++ D+ D A + + Sbjct: 77 YAYYKSANLSMALVSIDRFMRLNPTHPNIDYMLYLRGLT------DMALDDSALQGLFGI 130 Query: 160 --------------QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 + ++++E Y +S Y ++ + +N+LA E++I RYY KRG Sbjct: 131 DRSDRDPIYVLAAFRDFTQLIENYPDSQYATDSQKRLLYLKNRLAKHELDIARYYTKRGA 190 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +VA + R + ++ NY D + +A+ + AY L L ++A +V LI Sbjct: 191 HVAVVNRIEQMMQNYPDTQATRDALPLMKNAYERLQLNEQADQVAKLI 238 >gi|50085932|ref|YP_047442.1| putative competence protein (ComL) [Acinetobacter sp. ADP1] gi|49531908|emb|CAG69620.1| putative competence protein (ComL) [Acinetobacter sp. ADP1] Length = 351 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 68/258 (26%), Positives = 122/258 (47%), Gaps = 27/258 (10%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSK 75 Y++ AL++ + A +VG ++V +D T + ++Y +KA L +++ Sbjct: 6 YKITMLALSLGVAAA---MVGCSSNPKKEV-VD--TGPQSSEQIYFQKAEKALDRGQYTE 59 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + +P A ++ L +V++ +Y+ S + +I P+ N+DYVYY Sbjct: 60 AAKSLEAIDTYYPTGQYAAQAQLDLLYVKFQQKEYETVVSQADRFIRLNPQHPNIDYVYY 119 Query: 136 LVGM--------------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARF 180 + G+ S Q RD Y KL Q ++ R+ +SPY V A+ Sbjct: 120 IRGVANMELNYDSLMRYTSLQQSHRDTSY----MKLAYQNFVDLIRRFPSSPYSVDAAQR 175 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 +G+ +LA E+ + R+ +KR +VAAI R Q V+ ++ EA+A L AY L Sbjct: 176 MKFIGQ-ELAESEMNVARFNIKRKAWVAAIDRAQWVVEHFPQTPQTPEALATLAYAYNEL 234 Query: 241 ALMDEAREVVSLIQERYP 258 +++ V+L++ YP Sbjct: 235 GDQATSQQYVNLLKLNYP 252 >gi|220904471|ref|YP_002479783.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868770|gb|ACL49105.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 243 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 94/189 (49%), Gaps = 10/189 (5%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 +YL D +E++E A + E+N+ +A E +N+ +PF+ + L + Sbjct: 27 IYLPPAEDT--AQEIFEAANDAMSEKNYVRAVELYNKLRDTYPFSPYTIDAELSLGDAYF 84 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM--LQYMS 163 +Y+ A+ +++ + +P + + YV Y GMS + R + D+ T+L Y + Sbjct: 85 LDEEYELASESYKDFESLHPRHEAIPYVLYQTGMSLLKQFRSI--DRATTELQEAYDYFN 142 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD- 222 R+ + Y +SPY KGA ++ R +A E+ I + +Y A R++ ++ N+ D Sbjct: 143 RLHQMYPDSPYAKGAEEHMITCRKLMAEHELYIADVFWHMKKYGPAWHRYEFIVKNFQDV 202 Query: 223 ---AEHAEE 228 AEHA+E Sbjct: 203 PEVAEHAKE 211 >gi|145633598|ref|ZP_01789326.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae 3655] gi|145637337|ref|ZP_01792997.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittHH] gi|148825562|ref|YP_001290315.1| hypothetical protein CGSHiEE_02415 [Haemophilus influenzae PittEE] gi|229845162|ref|ZP_04465296.1| conserved hypothetical lipoprotein [Haemophilus influenzae 6P18H1] gi|229847287|ref|ZP_04467390.1| conserved hypothetical lipoprotein [Haemophilus influenzae 7P49H1] gi|144985804|gb|EDJ92418.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae 3655] gi|145269429|gb|EDK09372.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittHH] gi|148715722|gb|ABQ97932.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittEE] gi|229809830|gb|EEP45553.1| conserved hypothetical lipoprotein [Haemophilus influenzae 7P49H1] gi|229811873|gb|EEP47568.1| conserved hypothetical lipoprotein [Haemophilus influenzae 6P18H1] gi|309972702|gb|ADO95903.1| Probable outer membrane protein assembly complex subunit BamD [Haemophilus influenzae R2846] Length = 262 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 16/221 (7%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S+DV SV E+Y K L+E ++S+A Y + FP + +++L + Sbjct: 23 SKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQAMLDLIY 76 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYDQRAT--- 155 Y Y Q + + ++ Q+P+S N Y Y+ G++ A I+D RAT Sbjct: 77 ANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGIDRATRET 136 Query: 156 ---KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + +V + NSPY + A + ++ LA E+EI ++Y KR +VA R Sbjct: 137 TSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKAWVAVANR 196 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +L Y D + E + + EAY + L A + +I Sbjct: 197 VVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKII 237 >gi|145628475|ref|ZP_01784275.1| conserved hypothetical lipoprotein [Haemophilus influenzae 22.1-21] gi|145639767|ref|ZP_01795369.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae PittII] gi|144978945|gb|EDJ88631.1| conserved hypothetical lipoprotein [Haemophilus influenzae 22.1-21] gi|145271135|gb|EDK11050.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae PittII] gi|309750407|gb|ADO80391.1| Probable outer membrane protein assembly complex subunit BamD [Haemophilus influenzae R2866] Length = 262 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 16/221 (7%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S+DV SV E+Y K L+E ++S+A Y + FP + +++L + Sbjct: 23 SKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQAMLDLIY 76 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYDQRAT--- 155 Y Y Q + + ++ Q+P+S N Y Y+ G++ A I+D RAT Sbjct: 77 ANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGIDRATRET 136 Query: 156 ---KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + +V + NSPY + A + ++ LA E+EI ++Y KR +VA R Sbjct: 137 TSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKAWVAVANR 196 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +L Y D + E + + EAY + L A + +I Sbjct: 197 VVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKII 237 >gi|238785832|ref|ZP_04629801.1| hypothetical protein yberc0001_12680 [Yersinia bercovieri ATCC 43970] gi|238798953|ref|ZP_04642416.1| hypothetical protein ymoll0001_9580 [Yersinia mollaretii ATCC 43969] gi|238713245|gb|EEQ05288.1| hypothetical protein yberc0001_12680 [Yersinia bercovieri ATCC 43970] gi|238717182|gb|EEQ09035.1| hypothetical protein ymoll0001_9580 [Yersinia mollaretii ATCC 43969] Length = 240 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 15/233 (6%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 A LV S++DV D+ E+Y A L++ NF A +PF Sbjct: 8 ATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNRYPFG 62 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM------ 144 +++ L + Y + A + + ++ P N+DYV Y+ G++ + Sbjct: 63 PYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDDSALQ 122 Query: 145 ----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 I D + K + S++++ Y NS Y A+ + +++LA E+ + +YY Sbjct: 123 GFFGIDRSDRDPQHAKAAFRDFSQLIQSYPNSQYATDAQKRLMFLKDRLAKHELAVAQYY 182 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 KRG YVA + R + +L +Y D + +A+ + AY L L +A +V +I Sbjct: 183 TKRGAYVAVVNRVEQMLRDYPDTKATRDALPLMENAYKQLQLNAQADKVAKII 235 >gi|239996650|ref|ZP_04717174.1| Competence lipoprotein ComL [Alteromonas macleodii ATCC 27126] Length = 254 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/215 (21%), Positives = 104/215 (48%), Gaps = 10/215 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +++Y++A ++ NFS A + + +PF ++ + L + Y +GK ++ + Sbjct: 38 QQLYDRAKQSMEVGNFSAAAQTLSALDSRYPFGPLSHQVQLDLIYSYYKSGKNEETLATI 97 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167 + +I P +VDY YY+ G++ + I D ++ + R+++ Sbjct: 98 DRFIRLNPNHSDVDYAYYMRGLTNMESDSNLFQELMNIDRTDRDPSKSRAAFEDFRRLIQ 157 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 +Y +S Y A+ + +++LA E+ I R+Y++R YVAA R + V+ ++ + + Sbjct: 158 QYPDSKYAADAKQRMVHIKDRLARYEIAIARFYMRRQAYVAAANRGRYVIEHFPNTTQVQ 217 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 +A+ +V +Y L L + + ++ YP + Sbjct: 218 QALEIMVSSYEQLGLDELRNNAMKTLKLNYPDSEF 252 >gi|260582392|ref|ZP_05850184.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae NT127] gi|260094543|gb|EEW78439.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae NT127] gi|301168828|emb|CBW28419.1| predicted lipoprotein [Haemophilus influenzae 10810] Length = 262 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 16/221 (7%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S+DV SV E+Y K L+E ++S+A Y + FP + +++L + Sbjct: 23 SKDVEQASVN------ELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQAMLDLIY 76 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYDQRAT--- 155 Y Y Q + + ++ Q+P+S N Y Y+ G++ A I+D RAT Sbjct: 77 ANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGIDRATRET 136 Query: 156 ---KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + +V + NSPY + A + ++ LA E+EI ++Y KR +VA R Sbjct: 137 TSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKAWVAVANR 196 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +L Y D + E + + EAY + L A + +I Sbjct: 197 VVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKII 237 >gi|332992386|gb|AEF02441.1| Competence lipoprotein ComL [Alteromonas sp. SN2] Length = 255 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 49/212 (23%), Positives = 105/212 (49%), Gaps = 10/212 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +++Y +A ++ NFS A + +PF ++ + L + Y +GK + + Sbjct: 39 QQLYNRAKQSMEVGNFSAAAQTLGALDSRYPFGPLSHQVQLDLIYSYYKSGKSDETLATI 98 Query: 118 EEYITQYPESKNVDYVYYLVGM----SYAQMIRDV------PYDQRATKLMLQYMSRIVE 167 + +I P +VDY YY+ G+ S + + +D+ D ++ + R+++ Sbjct: 99 DRFIRLNPNHSDVDYAYYMRGLTNMESDSNLFQDLMNIDRTDRDPSKSRQAFEDFRRLMQ 158 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 +Y +S Y AR + +++LA E+ I R+Y++R YVAA R + V+ ++ ++ + Sbjct: 159 QYPDSKYAADARKRMLHIKDRLARYEIAIARFYMRRHAYVAAANRGRYVIEHFPESTQIQ 218 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +A+ +V +Y L L D + ++ +P+ Sbjct: 219 QALEIMVSSYEQLGLDDLRGNAMKTLKLNFPE 250 >gi|260775125|ref|ZP_05884023.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio coralliilyticus ATCC BAA-450] gi|260608826|gb|EEX34988.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio coralliilyticus ATCC BAA-450] Length = 241 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 18/245 (7%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 T+ +A+ LVG SS ++ V D+ E+Y +A + L+ N+ A + Sbjct: 5 TLSGLLALSVLVGC--SSSEEI----VPDIP-PSELYSEAQISLQSGNWLTAIDKLEALD 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +PF + + L + Y + E + P + +D+V Y+ G+++ Sbjct: 58 SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFSRLNPTHEKLDWVLYMRGLTHMAQ 117 Query: 145 IRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 R+ +D K +++ERY NSPY + A+ + +N+LA ++ Sbjct: 118 DRNFMHDLFNVDRSDRDPEPVKKAFADFKKLLERYPNSPYAEDAQKRMFALKNRLAEYDL 177 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +YL+R ++AAI R Q + Y D E A +++ +EAY L L D A+ LI Sbjct: 178 ATADFYLRREAWIAAINRTQELQKTYPDTEAARKSLEIQLEAYEKLGLEDAAKRTRQLI- 236 Query: 255 ERYPQ 259 E PQ Sbjct: 237 ELNPQ 241 >gi|325981784|ref|YP_004294186.1| outer membrane assembly lipoprotein YfiO [Nitrosomonas sp. AL212] gi|325531303|gb|ADZ26024.1| outer membrane assembly lipoprotein YfiO [Nitrosomonas sp. AL212] Length = 268 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/256 (22%), Positives = 112/256 (43%), Gaps = 23/256 (8%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 L+ AL + ++ C L+ +R ++ + + ++ E EK L + ++ A + Sbjct: 2 LHSLALFLVLGLSACGLLP-DRTDDQEDW----SANKFYSEAKEK----LNDGSYPAAIK 52 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + +P+ +A+++ L A+ Y + A + + +I +P NVDY YY+ G Sbjct: 53 LYETLESRYPYGRIAQQAQLEVAYAHYKNDEPASAIAAADRFIKLHPNHANVDYAYYIKG 112 Query: 139 MSYAQ-------MIRDVPY-------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 ++ + P+ D +A+ + +V R+ S Y +R + Sbjct: 113 LANFNEGWGMLGFLLKGPFKQDMSERDPKASYESFEIFKELVTRFPESKYAADSRQRMAY 172 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 N LA E+ RYY+KR Y+AA R Q + Y EEA+ ++ AY AL + D Sbjct: 173 LLNLLAMGEIHTARYYMKRKAYIAAANRAQNAVKEYPPTPATEEALYIMIRAYEALEMYD 232 Query: 245 EAREVVSLIQERYPQG 260 + +++ +P Sbjct: 233 LRDDAERVMRINFPNS 248 >gi|145631296|ref|ZP_01787068.1| conserved hypothetical lipoprotein [Haemophilus influenzae R3021] gi|144983081|gb|EDJ90581.1| conserved hypothetical lipoprotein [Haemophilus influenzae R3021] Length = 262 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 16/221 (7%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S+DV SV E+Y K L+E ++S+A Y + FP + +++L + Sbjct: 23 SKDVEQASVN------ELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQAMLDLIY 76 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYDQRAT--- 155 Y Y Q + + ++ Q+P+S N Y Y+ G++ A I+D RAT Sbjct: 77 ANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGIDRATRET 136 Query: 156 ---KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + +V + NSPY + A + ++ LA E+EI ++Y KR +VA R Sbjct: 137 TSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKAWVAVANR 196 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +L Y D + E + + EAY + L A + +I Sbjct: 197 VVGMLQQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKII 237 >gi|198282732|ref|YP_002219053.1| outer membrane assembly lipoprotein YfiO [Acidithiobacillus ferrooxidans ATCC 53993] gi|198247253|gb|ACH82846.1| outer membrane assembly lipoprotein YfiO [Acidithiobacillus ferrooxidans ATCC 53993] Length = 261 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 96/201 (47%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 R +++ A + +++ A + F +P+ A ++ L +A+ Y G + AA+ Sbjct: 46 RALFQPAKHAMDRGDYAAAIKLFEDLETRYPYGPYAEQAQLDTAYSYYQRGDSEAAAAAA 105 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E +I +P + VDY +YL G++Y Q I+ + R + + + +R+ +S Y Sbjct: 106 ERFIKLHPANPYVDYAWYLKGIAYYQAIQGAQENPRPAEEAFSTLDTLAKRWPHSVYAAD 165 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 AR + N L + ++I ++Y R YVA+ R V+ Y + EEA+ L Y Sbjct: 166 ARLRMAKIINILGQRNLDICKFYYVRHAYVASANRCNTVITRYQLSTAREEALYYLTRDY 225 Query: 238 VALALMDEAREVVSLIQERYP 258 L L A+ V+++ YP Sbjct: 226 RHLDLPQLAQTTVAVLAYNYP 246 >gi|218666506|ref|YP_002424926.1| competence lipoprotein ComL, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|218518719|gb|ACK79305.1| competence lipoprotein ComL, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 251 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 96/201 (47%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 R +++ A + +++ A + F +P+ A ++ L +A+ Y G + AA+ Sbjct: 36 RALFQPAKHAMDRGDYAAAIKLFEDLETRYPYGPYAEQAQLDTAYSYYQRGDSEAAAAAA 95 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E +I +P + VDY +YL G++Y Q I+ + R + + + +R+ +S Y Sbjct: 96 ERFIKLHPANPYVDYAWYLKGIAYYQAIQGAQENPRPAEEAFSTLDTLAKRWPHSVYAAD 155 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 AR + N L + ++I ++Y R YVA+ R V+ Y + EEA+ L Y Sbjct: 156 ARLRMAKIINILGQRNLDICKFYYVRHAYVASANRCNTVITRYQLSTAREEALYYLTRDY 215 Query: 238 VALALMDEAREVVSLIQERYP 258 L L A+ V+++ YP Sbjct: 216 RHLDLPQLAQTTVAVLAYNYP 236 >gi|332141866|ref|YP_004427604.1| Competence lipoprotein ComL [Alteromonas macleodii str. 'Deep ecotype'] gi|327551888|gb|AEA98606.1| Competence lipoprotein ComL [Alteromonas macleodii str. 'Deep ecotype'] Length = 254 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/215 (21%), Positives = 104/215 (48%), Gaps = 10/215 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +++Y++A ++ NFS A + + +PF ++ + L + Y +GK ++ + Sbjct: 38 QQLYDRAKQSMEVGNFSAAAQTLSALDSRYPFGPLSHQVQLDLIYSYYKSGKNEETLATI 97 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167 + +I P +VDY YY+ G++ + I D ++ + R+++ Sbjct: 98 DRFIRLNPNHSDVDYAYYMRGLTNMESDSNLFQELMNIDRTDRDPSKSRQAFEDFRRLIQ 157 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 +Y +S Y A+ + +++LA E+ I R+Y++R YVAA R + V+ ++ + + Sbjct: 158 QYPDSKYAADAKQRMVHIKDRLARYEIAIARFYMRRQAYVAAANRGRYVIEHFPNTTQVQ 217 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 +A+ +V +Y L L + + ++ YP + Sbjct: 218 QALEIMVSSYEQLGLKELRDNAMKTLKLNYPDSEF 252 >gi|90408472|ref|ZP_01216631.1| hypothetical protein PCNPT3_03216 [Psychromonas sp. CNPT3] gi|90310404|gb|EAS38530.1| hypothetical protein PCNPT3_03216 [Psychromonas sp. CNPT3] Length = 241 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/211 (23%), Positives = 104/211 (49%), Gaps = 10/211 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y+ A L+ N+ KA E +PF + + L + Y + A + + Sbjct: 27 LYQDAKAQLQAANYEKASEILEALDSRYPFGPHSDQVQLDLIYSYYKRDESALALANIDR 86 Query: 120 YITQYPESKNVDYVYYLVGMS-------YAQMIRDVPYDQRATKLMLQYM---SRIVERY 169 ++ P ++DY+YY+ G++ + Q + ++ R LQ S++V+ Y Sbjct: 87 FMRLNPTHPDLDYLYYMRGLTQIAADQEFFQSLFNIERFDRDPSHALQAFKDFSQLVKFY 146 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 S Y A+ ++ +++LA E+ I ++Y KR Y+A+I R +++L NY D++ E+A Sbjct: 147 PKSQYAADAQLHLIDIKSRLARYELSIAKWYFKREAYIASINRTKIILNNYPDSDSIEDA 206 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 + +++ Y L L+ +++++ YP+ Sbjct: 207 LVLMIKGYERLNLVTPKTNALAILKMNYPKN 237 >gi|332974184|gb|EGK11118.1| DNA uptake lipoprotein family protein [Psychrobacter sp. 1501(2011)] Length = 387 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 14/218 (6%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 TD +Y Y++AV + + + A E ++ +P A ++LL + Q+ + +Y Sbjct: 60 TDAQY----YKEAVDAMDKGRYIYAAEQLSELRTFYPTGAYAEQALLDLMYSQFQSNEYA 115 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-------IRDVPYDQRAT---KLMLQY 161 A + E++I YP + VDY YY+ G++ Q I + R T +L Sbjct: 116 LAVTSAEQFIKLYPRNNQVDYAYYVRGVANMQAGTSSLLNITKLQQAHRDTSYYRLAFGN 175 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 ++ ++ NS Y A +T NQ A E+ R+Y+KR YVAA R + V + Sbjct: 176 FQELLAKFPNSSYAPDAAQRMTYIYNQFAESELSAARWYIKREAYVAAANRAKWVFQYFP 235 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 ++ EA+A L L L D A++ +L+Q YP+ Sbjct: 236 QSQQVPEAIAILAYTNEQLGLNDLAQQYKTLLQINYPE 273 >gi|123441244|ref|YP_001005231.1| outer membrane protein assembly complex subunit YfiO [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332160280|ref|YP_004296857.1| outer membrane protein assembly complex subunit YfiO [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|122088205|emb|CAL10993.1| putative lipoprotein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318604492|emb|CBY25990.1| putative component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Yersinia enterocolitica subsp. palearctica Y11] gi|325664510|gb|ADZ41154.1| outer membrane protein assembly complex subunit YfiO [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863601|emb|CBX73711.1| UPF0169 lipoprotein yfiO [Yersinia enterocolitica W22703] Length = 243 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 15/233 (6%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 A LV S++DV D+ E+Y A L++ NF A +PF Sbjct: 11 ATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNRYPFG 65 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM------ 144 +++ L + Y + A + + ++ P N+DYV Y+ G++ + Sbjct: 66 PYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDDSALQ 125 Query: 145 ----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 I D + K + +++++ Y NS Y A+ + +++LA E+ + +YY Sbjct: 126 GFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLMFLKDRLAKHELAVAQYY 185 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 KRG YVA + R + +L +Y D + +A+ + AY L L +A +V +I Sbjct: 186 TKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLNAQADKVAKII 238 >gi|311693417|gb|ADP96290.1| DNA uptake lipoprotein [marine bacterium HP15] Length = 291 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 10/209 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A + NF++A + + +PF A ++ L + +Y + + + + + Sbjct: 49 YENAREAMTSGNFNEAEQNLDALETYYPFGRYAEQAQLDLIYARYQNLDLEGSRAAADRF 108 Query: 121 ITQYPESKNVDYVYYLVGM-SYAQMI----RDVPYD--QRATKLMLQYM---SRIVERYT 170 + P+S + DY Y+ G+ SY I R P D R LQ S ++ RY Sbjct: 109 LRLNPQSDHADYALYMRGLASYNLDIGLAARYFPIDVAARDPGEQLQSFRDFSELLNRYP 168 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 +S YV AR + RN++A E+ RYY+KR YVAA R + ++ NY A EEA+ Sbjct: 169 DSQYVADARQRMIAVRNRMAELELYAARYYVKRQAYVAANNRARYIIENYPTATVTEEAL 228 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQ 259 L E + L L +++ +++++ +P+ Sbjct: 229 IILAETFRFLELRKGSQDAIAMLRTNFPE 257 >gi|238790741|ref|ZP_04634502.1| hypothetical protein yfred0001_15820 [Yersinia frederiksenii ATCC 33641] gi|238721182|gb|EEQ12861.1| hypothetical protein yfred0001_15820 [Yersinia frederiksenii ATCC 33641] Length = 240 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 15/233 (6%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 A LV S++DV D+ E+Y A L++ NF A +PF Sbjct: 8 ATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNRYPFG 62 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM------ 144 +++ L + Y + A + + ++ P N+DYV Y+ G++ + Sbjct: 63 PYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDDSALQ 122 Query: 145 ----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 I D + K + +++++ Y NS Y A+ + +++LA E+ + +YY Sbjct: 123 GFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLIFLKDRLAKHELAVAQYY 182 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 KRG YVA + R + +L +Y D + +A+ + AY L L +A +V +I Sbjct: 183 TKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLNAQADKVAKII 235 >gi|255610036|ref|XP_002539124.1| Competence lipoprotein comL precursor, putative [Ricinus communis] gi|223508511|gb|EEF23259.1| Competence lipoprotein comL precursor, putative [Ricinus communis] Length = 169 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 13/148 (8%) Query: 124 YPESKNVDYVYYLVGMSY-----------AQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 +P N+DY YYL G++ Q I D D + ++ +VER+ S Sbjct: 2 HPNHPNLDYAYYLKGLATFNERGIMEKYTKQEIND--RDPKTLRVSFNAFKELVERFPTS 59 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 Y K + + N LA E+ + RYY++R YVAA+ R + VL Y ++ E+A+ Sbjct: 60 RYAKDSTQRMVYLVNTLAMHEMHVARYYMQRKAYVAALNRTRYVLETYPNSSSVEDALVT 119 Query: 233 LVEAYVALALMDEAREVVSLIQERYPQG 260 ++ AY A+ + D + + +++ YP+ Sbjct: 120 MISAYDAMDMADLKADTLRILKTNYPEN 147 >gi|325265796|ref|ZP_08132483.1| competence lipoprotein ComL [Kingella denitrificans ATCC 33394] gi|324982779|gb|EGC18404.1| competence lipoprotein ComL [Kingella denitrificans ATCC 33394] Length = 268 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 13/204 (6%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A L N+S A + P +SLL SA+ Y + QA +L Sbjct: 39 LYSEARNALNSGNYSHANALYGVLRARQPDGRYTEQSLLDSAYAHYKNEEMSQALALLSR 98 Query: 120 YITQYPESKNVDYVYYLVGM-------SYAQMIRDVPYDQR---ATKLMLQYMSRIVERY 169 + YP S ++DY YL G+ S+ + + + R A + + ++V R+ Sbjct: 99 FERNYPASVDMDYALYLKGLIFFAEDQSFLRKLASQDWSDRDPEANRRAFRVFEQLVNRF 158 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 S Y + +R + + L E+ I RYY KR YVAA R Q VL Y + + EEA Sbjct: 159 PQSKYAEDSRRRMAQLVDALGGHEIAIARYYAKRHAYVAANNRAQRVLQQYQNTRYVEEA 218 Query: 230 MARLVEAYVALA---LMDEAREVV 250 +A ++ +Y + L D+ R V+ Sbjct: 219 LAIMIFSYEKMGNTQLADDTRRVL 242 >gi|284007739|emb|CBA73553.1| lipoprotein [Arsenophonus nasoniae] Length = 269 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 12/206 (5%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y + L+ N+ A + +PF A+++ L + Y + + A + + Sbjct: 60 DIYTSSQEKLQSGNYKGAIKLLETLDNRYPFGPYAQQAQLDMIYAYYKSAELPLAIATID 119 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-----------DQRATKLMLQYMSRIVE 167 +I P N+DYV Y+ G++ AQ + D D + + + S++V Sbjct: 120 RFIRLNPTHPNIDYVLYMRGLT-AQALDDSALQDFFGIDRSDRDPQHALVAFRDFSQLVR 178 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y NS Y A + + +LA E+ I +YY KRG YVA I R + +L NY D + Sbjct: 179 FYPNSIYATDASKRLAFLKERLAKYELAIVKYYNKRGAYVAVINRTEQMLKNYPDTQSTR 238 Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253 A+ + AY L L E +V +LI Sbjct: 239 NALKYMEIAYNQLGLSQEKNKVAALI 264 >gi|260221243|emb|CBA29611.1| Competence lipoprotein comL [Curvibacter putative symbiont of Hydra magnipapillata] Length = 268 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 92/181 (50%), Gaps = 16/181 (8%) Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL---------VGMSYA 142 +A+++ L A+ Q+ AG+ Q+ + E +I +P S +DY YL +G+ + Sbjct: 72 LAQQAQLDKAYAQFKAGEQAQSLATLERFIKLHPASPALDYAIYLRGIVNFNDDLGLLSS 131 Query: 143 QMIRDVP-YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +D+ DQ+A K + + R+ +S Y A+ + LA EV + +YY Sbjct: 132 ITRQDLAERDQKAAKESFESFKELTTRFPDSKYAPDAQQRMNYIVGSLAQYEVHVAKYYY 191 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQERYP 258 KRG Y+AA R Q + +Y D EEA+ L ++Y AL L D+A+ V +++ +P Sbjct: 192 KRGAYLAAANRAQQCITDYRDVPATEEALFILYKSYDALGMEQLRDDAKRV---LEKNFP 248 Query: 259 Q 259 Q Sbjct: 249 Q 249 >gi|237809511|ref|YP_002893951.1| outer membrane assembly lipoprotein YfiO [Tolumonas auensis DSM 9187] gi|237501772|gb|ACQ94365.1| outer membrane assembly lipoprotein YfiO [Tolumonas auensis DSM 9187] Length = 253 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 23/245 (9%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 +++ L G S + D +V +Y++A L ++ +A + +PF Sbjct: 13 LSLSLLAGCSSSSDKPKVPDEPLEV-----LYKQAQSKLHNGDYERAVDILEALDSRYPF 67 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ------ 143 A + L + Y QA + + ++ P K+VDYVYY+ G++ Q Sbjct: 68 GPYASQVQLQLIYAYYKKEDTAQAIANIDRFLRLNPTHKDVDYVYYMRGLANMQEDYNFF 127 Query: 144 --------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 RD Y ++A K +++ Y +S Y AR +N+LA ++ Sbjct: 128 HDKFGIDRSDRDPQYARQAFK----DFQLVLKNYPDSLYASDARARAVYLKNRLAKFDLA 183 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 I +Y++R +V+A R + ++ NY D E + A+ +V+AY + L D A+ ++ Sbjct: 184 IADFYMRREAWVSAANRAKYLIENYPDTEMTQPALEIMVQAYEKMDLTDLAKHARQMLST 243 Query: 256 RYPQG 260 YP Sbjct: 244 NYPDS 248 >gi|323497825|ref|ZP_08102839.1| putative lipoprotein [Vibrio sinaloensis DSM 21326] gi|323317172|gb|EGA70169.1| putative lipoprotein [Vibrio sinaloensis DSM 21326] Length = 241 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 17/240 (7%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 T+ +A+ LVG SS ++ V DV E+Y +A + L+ N+ A Sbjct: 5 TLSGLLALSVLVGC--SSSEEI----VPDVP-PSELYSEAQISLQSGNWLSAISQLEALD 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +PF + + L + Y + E + P + +D+V Y+ G+++ Sbjct: 58 SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKLDWVLYMRGLTHMAQ 117 Query: 145 IRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 R+ +D K R++ERY SPY + A+ + +N+LA ++ Sbjct: 118 DRNFMHDLFNVDRSDRDPEPVKKAFADFKRLLERYPTSPYAEDAQKRMLALKNRLAEYDL 177 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +YL+R ++AAI R Q + Y D A E++ +EAY AL L D + LI+ Sbjct: 178 ATADFYLRREAWIAAINRTQELQKTYPDTVAARESLQIQLEAYKALGLEDAIKRTQQLIE 237 >gi|312796111|ref|YP_004029033.1| lipoprotein, ComL family [Burkholderia rhizoxinica HKI 454] gi|312167886|emb|CBW74889.1| Lipoprotein, ComL family [Burkholderia rhizoxinica HKI 454] Length = 276 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 10/212 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +++Y +A ++ K +YF PF A+++ + A+ Q+ + A Sbjct: 42 NQKLYSEAQDAFTAGDWGKCSKYFELLQGRDPFGHFAQQAQINVAYCQWKDNETAAAEQA 101 Query: 117 GEEYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-YDQRATKLMLQYMSRIV 166 + +I +P+ ++ Y YYL G+ S+ + +D+ D +A + +V Sbjct: 102 VDRFIQLHPDHPDIAYAYYLKGLISFNDDLGLFGRFAGQDMSERDPKALRDSYDAFRVVV 161 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 E+Y +S Y A + N LA+ EV YY +RG YVAAI R QLVL Y +A Sbjct: 162 EKYPSSKYAPDAAQRMRYIVNALASHEVHTADYYYRRGAYVAAINRAQLVLKEYKNAPAT 221 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYP 258 E+A+ ++ +Y AL A + ++ +P Sbjct: 222 EDALHVMILSYRALNQPQLADDTQRVLTSTFP 253 >gi|224368344|ref|YP_002602507.1| putative DNA uptake lipoprotein [Desulfobacterium autotrophicum HRM2] gi|223691060|gb|ACN14343.1| putative DNA uptake lipoprotein [Desulfobacterium autotrophicum HRM2] Length = 201 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 79/167 (47%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 ++Q++ A + F +PF+ A + L A + +Y +A +E+ +P++ Sbjct: 16 FRDQDYKYAIKSFTTLKDWYPFSKYAILAELKIADAHFQLEEYDEAIFAYQEFENLHPKN 75 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 + + YV Y G + I V DQR +R+V R+ ++P A ++ V Sbjct: 76 EAIPYVIYQTGRCWFDRIDTVDRDQRCALKAQTEFNRLVHRFPDAPESAKAAQHIEVCIK 135 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 LA E+ + +Y K Y AA+ RF+ + ANY D +EA+ R+ Sbjct: 136 SLAGHELYVAEFYFKAKHYKAAMKRFEHLFANYPDTREGKEALPRIA 182 >gi|332704216|ref|ZP_08424304.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio africanus str. Walvis Bay] gi|332554365|gb|EGJ51409.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio africanus str. Walvis Bay] Length = 243 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/196 (21%), Positives = 92/196 (46%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 FF VC L+ Y T E+++ + +++++ A EYF + Sbjct: 6 FFIFTVCALIAASSGCGVIDYFFIPTPEETALELFQAGQEEMAQEDWADAVEYFTKLRDR 65 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 FPF+ ++ L+ A ++ GKY +A +E+ + +P + YV + +GM+ + + Sbjct: 66 FPFSPYTVQAELLLANSHFNDGKYAEALQAYKEFESLHPSDPRIPYVLFQIGMANYKSMG 125 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 + Q +++ R+++ Y +S + A+ ++ + R +LA E+ + +Y + + Sbjct: 126 SIDKPQHQAAEAVEFFRRLIQSYPDSEFAPKAKDHLLLARRRLAEHELFVADFYWRAERF 185 Query: 207 VAAIPRFQLVLANYSD 222 +A R+ V+ Y D Sbjct: 186 GSAWERYSFVVEQYKD 201 >gi|317153532|ref|YP_004121580.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio aespoeensis Aspo-2] gi|316943783|gb|ADU62834.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio aespoeensis Aspo-2] Length = 242 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 80/165 (48%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +E+YE + + + + A +YF++ FPF+ A ++ L + Y A Sbjct: 35 QELYEAGMDAMGNKEYGDAQQYFSKLKDRFPFSPFALRAELALGDAYFLDADYLMALDSY 94 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 +E+ +P +++ YV Y +G + + R + Q + L+Y R+ E Y +S Y Sbjct: 95 KEFEALHPSHESIPYVLYQIGSADFNLFRSIDRRQENIQEGLEYFYRLRETYPDSEYATA 154 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + +T GR LA EV + ++ + +Y A R+Q V+ N+SD Sbjct: 155 SEDMITKGRRILAEHEVYVADFFWRTEQYGPAWNRYQYVVENFSD 199 >gi|238021800|ref|ZP_04602226.1| hypothetical protein GCWU000324_01703 [Kingella oralis ATCC 51147] gi|237866414|gb|EEP67456.1| hypothetical protein GCWU000324_01703 [Kingella oralis ATCC 51147] Length = 276 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/250 (24%), Positives = 117/250 (46%), Gaps = 17/250 (6%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR----EVYEKAVLFLKEQNFSKAYEYFN 81 +F ++AV + ++ V +DS T + Q ++Y +A L +N+ +A + + Sbjct: 10 LFIALAVALTGCAFKDKAKKVKIDSDT-IAAQNWSNDQLYNEARSELNAKNYDRANKLYE 68 Query: 82 QC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM- 139 +R P +SLL +A+ Y + +A +L + YP S ++DY YL G+ Sbjct: 69 ILRARQAP-GRYTEQSLLDAAYAHYKNEEPAKALALLSRFEHNYPASIDMDYALYLRGLV 127 Query: 140 ------SYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 S+ + + + D +A + + + +V RY +S Y + AR + + L Sbjct: 128 LFDEDQSFLRKLASQDWSDRDPQANRRAYRVFNELVTRYPDSKYAEDARKRMAQLVDALG 187 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 ++ I +YY KRG Y+AA R Q V+ + + EEA+A + Y + A + Sbjct: 188 GHQIAIAKYYAKRGAYLAANNRAQEVIKQFQNTRFVEEALAIMAYTYGKMGNEQSANDTK 247 Query: 251 SLIQERYPQG 260 ++Q+ +PQ Sbjct: 248 RVLQQNFPQS 257 >gi|37525234|ref|NP_928578.1| outer membrane protein assembly complex subunit YfiO [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784661|emb|CAE13561.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 244 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 12/206 (5%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y K L++ ++ A + +PF +++ L + Y + A + + Sbjct: 35 EIYSKGQEKLQKGSYPDAIKQLETLDNRYPFGPYSQQVQLDLIYAYYKSSDLPMALASID 94 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-----------DQRATKLMLQYMSRIVE 167 +I P N+DYV Y+ G++ +Q + + P D ++ + S++V Sbjct: 95 RFIRLNPTHPNIDYVLYMRGLT-SQALDNSPLQSFFGIDHSDRDPEHARVAFKDFSQLVR 153 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 + NS Y A + + +LA E+ + YY KRG YVA + R + +L +Y D + Sbjct: 154 YHPNSLYTADAIKRLMFIKERLAKYELSVVEYYNKRGAYVAVVNRIEQMLRDYPDTQSTL 213 Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253 EA+ + AY L L+ +A +V LI Sbjct: 214 EALPYMKSAYTHLGLIAQADKVAKLI 239 >gi|315634973|ref|ZP_07890254.1| DNA uptake lipoprotein [Aggregatibacter segnis ATCC 33393] gi|315476235|gb|EFU66986.1| DNA uptake lipoprotein [Aggregatibacter segnis ATCC 33393] Length = 261 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 10/207 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ +Y +L++ ++S+A Y N S FP + + + L + Y Y + Sbjct: 32 EQTLYSTGQTYLQDGDYSQAIRYLNAVSSRFPGSSYSEQVQLNLIYAYYKTQDYSETLVT 91 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----QRAT------KLMLQYMSRIV 166 + +I ++P S ++DY Y+ G++ + + + D RAT K +V Sbjct: 92 IDRFIQRFPNSSHLDYALYMAGLTNSALGDNFFQDFFGVDRATRENTSIKTAFANFQNLV 151 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + + NSPY A +T + LA E+ I ++Y KR YVA R +L Y D + Sbjct: 152 QHFPNSPYTPDALARMTYIKASLARHELAIAKFYFKRDAYVATANRVVSMLKLYPDTQAT 211 Query: 227 EEAMARLVEAYVALALMDEAREVVSLI 253 +A+ + +Y + L A + +I Sbjct: 212 LDALPLMKASYEKMNLTHLADQTAKII 238 >gi|319942385|ref|ZP_08016699.1| hypothetical protein HMPREF9464_01918 [Sutterella wadsworthensis 3_1_45B] gi|319804073|gb|EFW00981.1| hypothetical protein HMPREF9464_01918 [Sutterella wadsworthensis 3_1_45B] Length = 262 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/241 (22%), Positives = 105/241 (43%), Gaps = 18/241 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L++ + A C W + +D LD + ++Y +A + L + N+++A +Y+ + Sbjct: 18 LSVTLATASC---SWLQSLDKDQTLDWSAE-----KLYSEARVALDDSNWTQAKDYYQKL 69 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF A+++ + + + G A + ++ YP N DYV YL ++ Sbjct: 70 EARYPFGQYAQQAQIELIYATWKDGDAPGAVQAADRFLQTYPNHANADYVMYLKALATLN 129 Query: 144 MIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 D A++ +V RY +S + AR + A E Sbjct: 130 ETDSWFNKLAGEDLAERDANASREAFDIFKELVMRYPDSRFTPEARRRMHGLVLAQAEHE 189 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 ++ RYY R YVAAI R Q V+ + + ++A+ + ++Y AL L + A + +I Sbjct: 190 LKTARYYFVRNAYVAAIERAQRVVREFQNTPMRDDALELIAQSYEALKLTELAADTRRII 249 Query: 254 Q 254 + Sbjct: 250 E 250 >gi|261250363|ref|ZP_05942939.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio orientalis CIP 102891] gi|260939479|gb|EEX95465.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio orientalis CIP 102891] Length = 241 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 11/211 (5%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A + L+ N+ A E +PF + + L + Y + E Sbjct: 32 ELYSDAQISLQSGNWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIE 91 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168 ++ P + +D+V Y+ G+++ R+ +D K +++ER Sbjct: 92 RFMRLNPTQEKLDWVLYMRGLTHMAQDRNFMHDLFNVDRSDRDPEPVKKAFADFKKLLER 151 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NSPY + ++ + +N+LA ++ +YL+R ++AAI R Q + Y D E A + Sbjct: 152 YPNSPYAEDSQKRMYALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARK 211 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259 ++ +EAY L L D LI E PQ Sbjct: 212 SLDIQLEAYKQLNLQDAVERTEKLI-ELNPQ 241 >gi|149907609|ref|ZP_01896356.1| hypothetical protein PE36_06967 [Moritella sp. PE36] gi|149809279|gb|EDM69208.1| hypothetical protein PE36_06967 [Moritella sp. PE36] Length = 245 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 16/224 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L I S+A+ G ++ +V E+Y A L+ NF A E Sbjct: 7 LAISLSLALVMATGCSSKTEPNVPDKPAI------ELYSIAQQSLQAGNFVSAIETLEAL 60 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA- 142 +PF + L + Y QA + + +I P K++DYVYY+ G++ Sbjct: 61 DTRYPFGPHTVQVQLDLIYAYYKNSDTAQALANIDRFIRLNPSHKDIDYVYYMRGLTNMG 120 Query: 143 ---QMIRDVPYDQRATK------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + D+ R+ + +R+++RY S YV A+ +++LA E Sbjct: 121 ADYNLFHDLFNIDRSDRDPSYANAAFNDFTRLIKRYPQSEYVADAQKRAIAIKSRLARYE 180 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 + YY+KR Y+AAI R Q ++ N++D E A+ +++AY Sbjct: 181 LSAAEYYMKRKAYIAAIQRAQHIIDNFADTESRTGALKVMIKAY 224 >gi|258592923|emb|CBE69232.1| putative Tetratricopeptide TPR_2 precursor [NC10 bacterium 'Dutch sediment'] Length = 304 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 46/212 (21%), Positives = 104/212 (49%), Gaps = 6/212 (2%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 TI FS++ C G + S + + + +D +E+ +A + + + ++ + Sbjct: 16 TILFSVSGC--AGLDLFSPKQAEVPAGSD----QELMSRAEAAFALKQYDEGRKHLQRLI 69 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +FP + + + L S + ++ ++ + + ++ +P+ + +D Y +G+SY + Sbjct: 70 NNFPESELVPTARLNSGRTYFDEKRFDESRAEYQRFMELFPQHEQLDEAQYYIGLSYFRQ 129 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + V DQ T + ++ + NS +V A+ + QL +E+ +G++Y R Sbjct: 130 MEKVDRDQTMTNNAAREFRTLINDFRNSQFVSDAQAKLAECYRQLVQRELYVGKFYFHRE 189 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 Y AAIPRF+ +L Y +++ ++A+ L E+ Sbjct: 190 AYGAAIPRFESILKEYPGSQYDDQALYYLGES 221 >gi|251788632|ref|YP_003003353.1| outer membrane protein assembly complex subunit YfiO [Dickeya zeae Ech1591] gi|247537253|gb|ACT05874.1| outer membrane assembly lipoprotein YfiO [Dickeya zeae Ech1591] Length = 243 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 26/243 (10%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A T+ ++A C +S+D D R E+Y A L++ NF A Sbjct: 10 AATLSLTLAGC-------SNSKDAVPD-----RPPSELYATAQEKLQDGNFKAAITQLEA 57 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +PF +++ L + Y + + A + + +I P NVDYV Y+ G++ Sbjct: 58 LDNRYPFGPYSQQVQLDLIYAYYKSAELPLAQASIDRFIRLNPTHPNVDYVLYMRGLT-- 115 Query: 143 QMIRD------------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 M +D D + + + S++++ Y NS Y + + +LA Sbjct: 116 NMAQDDSALQGFFGVDRSDRDPQYARAAFKAFSQLLQGYPNSQYATDTSKRLAFLKERLA 175 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 E+ + +YY KRG YVA + R + +L +Y D + A+ + AY L L +A +V Sbjct: 176 KYELSVAQYYTKRGAYVAVVNRVEQMLKDYPDTQATRTALPLMENAYRELQLTAQADKVA 235 Query: 251 SLI 253 +I Sbjct: 236 KII 238 >gi|22124819|ref|NP_668242.1| outer membrane protein assembly complex subunit YfiO [Yersinia pestis KIM 10] gi|45440504|ref|NP_992043.1| outer membrane protein assembly complex subunit YfiO [Yersinia pestis biovar Microtus str. 91001] gi|51595195|ref|YP_069386.1| outer membrane protein assembly complex subunit YfiO [Yersinia pseudotuberculosis IP 32953] gi|108808760|ref|YP_652676.1| outer membrane protein assembly complex subunit YfiO [Yersinia pestis Antiqua] gi|108810983|ref|YP_646750.1| outer membrane protein assembly complex subunit YfiO [Yersinia pestis Nepal516] gi|145600173|ref|YP_001164249.1| outer membrane protein assembly complex subunit YfiO [Yersinia pestis Pestoides F] gi|153948219|ref|YP_001402172.1| outer membrane protein assembly complex subunit YfiO [Yersinia pseudotuberculosis IP 31758] gi|153997672|ref|ZP_02022772.1| putative lipoprotein [Yersinia pestis CA88-4125] gi|162419347|ref|YP_001607808.1| outer membrane protein assembly complex subunit YfiO [Yersinia pestis Angola] gi|165926624|ref|ZP_02222456.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. F1991016] gi|165936801|ref|ZP_02225368.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. IP275] gi|166010083|ref|ZP_02230981.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. E1979001] gi|166213080|ref|ZP_02239115.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. B42003004] gi|167399369|ref|ZP_02304893.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421522|ref|ZP_02313275.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423440|ref|ZP_02315193.1| putative lipoprotein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470272|ref|ZP_02334976.1| putative lipoprotein [Yersinia pestis FV-1] gi|170025567|ref|YP_001722072.1| outer membrane protein assembly complex subunit YfiO [Yersinia pseudotuberculosis YPIII] gi|186894213|ref|YP_001871325.1| outer membrane protein assembly complex subunit YfiO [Yersinia pseudotuberculosis PB1/+] gi|218930303|ref|YP_002348178.1| outer membrane protein assembly complex subunit YfiO [Yersinia pestis CO92] gi|229838894|ref|ZP_04459053.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896562|ref|ZP_04511729.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis Pestoides A] gi|229899461|ref|ZP_04514604.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis biovar Orientalis str. India 195] gi|229901199|ref|ZP_04516322.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis Nepal516] gi|270489384|ref|ZP_06206458.1| outer membrane assembly lipoprotein YfiO [Yersinia pestis KIM D27] gi|294504992|ref|YP_003569054.1| putative lipoprotein [Yersinia pestis Z176003] gi|21957645|gb|AAM84493.1|AE013693_9 hypothetical protein y0911 [Yersinia pestis KIM 10] gi|45435361|gb|AAS60920.1| putative lipoprotein [Yersinia pestis biovar Microtus str. 91001] gi|51588477|emb|CAH20085.1| putative lipoprotein [Yersinia pseudotuberculosis IP 32953] gi|108774631|gb|ABG17150.1| lipoprotein [Yersinia pestis Nepal516] gi|108780673|gb|ABG14731.1| putative lipoprotein [Yersinia pestis Antiqua] gi|115348914|emb|CAL21871.1| putative lipoprotein [Yersinia pestis CO92] gi|145211869|gb|ABP41276.1| lipoprotein [Yersinia pestis Pestoides F] gi|149289309|gb|EDM39389.1| putative lipoprotein [Yersinia pestis CA88-4125] gi|152959714|gb|ABS47175.1| putative lipoprotein [Yersinia pseudotuberculosis IP 31758] gi|162352162|gb|ABX86110.1| putative lipoprotein [Yersinia pestis Angola] gi|165915450|gb|EDR34060.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. IP275] gi|165921552|gb|EDR38749.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. F1991016] gi|165990990|gb|EDR43291.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205867|gb|EDR50347.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960441|gb|EDR56462.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051873|gb|EDR63281.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057610|gb|EDR67356.1| putative lipoprotein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752101|gb|ACA69619.1| putative lipoprotein [Yersinia pseudotuberculosis YPIII] gi|186697239|gb|ACC87868.1| putative lipoprotein [Yersinia pseudotuberculosis PB1/+] gi|229681924|gb|EEO78017.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis Nepal516] gi|229687863|gb|EEO79936.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis biovar Orientalis str. India 195] gi|229695260|gb|EEO85307.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700340|gb|EEO88372.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis Pestoides A] gi|262363057|gb|ACY59778.1| putative lipoprotein [Yersinia pestis D106004] gi|262366981|gb|ACY63538.1| putative lipoprotein [Yersinia pestis D182038] gi|270337888|gb|EFA48665.1| outer membrane assembly lipoprotein YfiO [Yersinia pestis KIM D27] gi|294355451|gb|ADE65792.1| putative lipoprotein [Yersinia pestis Z176003] gi|320016470|gb|ADW00042.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 243 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 15/233 (6%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 A LV S++DV D+ E+Y A L++ NF A +PF Sbjct: 11 ATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNRYPFG 65 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM------ 144 +++ L + Y + A + + ++ P N+DYV Y+ G++ + Sbjct: 66 PYSQQVQLDLIYAYYKSADLPMAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDDSALQ 125 Query: 145 ----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 I D + + + +++++ Y NS Y A+ + +++LA E+ + +YY Sbjct: 126 GFFGIDRSDRDPQHARAAFRDFNQLIQNYPNSQYATDAQKRLVFLKDRLAKYELAVAQYY 185 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 KRG YVA + R ++ +Y D + +A+ + AY L L +A +V +I Sbjct: 186 TKRGAYVAVVNRVDQMMRDYPDTQATRDALPLMENAYKQLQLNAQADKVAKII 238 >gi|227115224|ref|ZP_03828880.1| outer membrane protein assembly complex subunit YfiO [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 244 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 15/222 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 +S+D DS E+Y A L++ NF A +PF +++ L Sbjct: 23 NSKDAVPDSPP-----SEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQVQLDLI 77 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151 + Y + + A + + ++ P NVDYV Y+ G++ + + D Sbjct: 78 YAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVDRSDRD 137 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + + S++++ Y NS Y A + + +LA E+ + +YY KRG YVA + Sbjct: 138 PQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRGAYVAVVN 197 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 R + +L +Y D + + A+ + AY L L +A +V +I Sbjct: 198 RVEQMLRDYPDTQATKNALPLMENAYRELQLAAQADKVAKII 239 >gi|242240267|ref|YP_002988448.1| outer membrane protein assembly complex subunit YfiO [Dickeya dadantii Ech703] gi|242132324|gb|ACS86626.1| outer membrane assembly lipoprotein YfiO [Dickeya dadantii Ech703] Length = 243 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 19/219 (8%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D+V D R E+Y A L+ NF A +PF +++ L + Y + Sbjct: 25 DTVPD-RPPAELYATAQEKLQSGNFKAAITQLEALDNRYPFGPYSQQVQLDLIYAYYKSA 83 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI--------------RDVPYDQRA 154 A + + +I P NVDYV Y+ G++ + RD Y + A Sbjct: 84 DLSLAQASIDRFIRLNPTHPNVDYVLYMRGLTNMALDDSALQGFFGVDRSDRDPQYARSA 143 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 K S++V+ Y S Y A + + +LA E + +YY KRG YVA + R + Sbjct: 144 FKAF----SQLVQEYPRSQYATDASKRLAYIKERLAKYEFSVAQYYTKRGAYVAVVNRVE 199 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +L +Y D + +A+ + AY L L+ EA +V +I Sbjct: 200 QMLKDYPDTQATRKALPLMENAYRELQLVGEADKVAKII 238 >gi|307132188|ref|YP_003884204.1| putative lipoprotein [Dickeya dadantii 3937] gi|306529717|gb|ADM99647.1| predicted lipoprotein [Dickeya dadantii 3937] Length = 244 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 26/243 (10%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A T+ ++A C +S+D D R E+Y A L++ NF A Sbjct: 10 AATLSLTLAGC-------SNSKDAVPD-----RPPSELYATAQEKLQDGNFKAAITQLEA 57 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +PF +++ L + Y + + A + + +I P NVDYV Y+ G++ Sbjct: 58 LDNRYPFGPYSQQVQLDLIYAYYKSAELPLAQASIDRFIRLNPTHPNVDYVLYMRGLT-- 115 Query: 143 QMIRD------------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 M +D D + + + S++++ Y NS Y + + +LA Sbjct: 116 NMAQDDSTLQGFFGVDRSDRDPQYARSAFKAFSQLLQGYPNSQYATDTSKRLAFLKERLA 175 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 E+ + +YY KRG YVA + R + +L +Y D + A+ + AY L L +A +V Sbjct: 176 KYELSVAQYYTKRGAYVAVVNRVEQMLKDYPDTQATRTALPLMENAYRELQLTAQADKVA 235 Query: 251 SLI 253 +I Sbjct: 236 KII 238 >gi|16272142|ref|NP_438345.1| hypothetical protein HI0177 [Haemophilus influenzae Rd KW20] gi|260580942|ref|ZP_05848766.1| conserved hypothetical protein [Haemophilus influenzae RdAW] gi|1175182|sp|P44553|Y177_HAEIN RecName: Full=Putative UPF0169 lipoprotein HI_0177; Flags: Precursor gi|1573134|gb|AAC21847.1| lipoprotein, putative [Haemophilus influenzae Rd KW20] gi|260092431|gb|EEW76370.1| conserved hypothetical protein [Haemophilus influenzae RdAW] Length = 262 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 16/221 (7%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S+DV SV E+Y K L+E ++S+A Y + FP + +++L + Sbjct: 23 SKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQAMLDLIY 76 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYDQRATK-- 156 Y Y Q + + ++ Q+ +S N Y Y+ G++ A I+D RAT+ Sbjct: 77 ANYKTQDYTQVLLMVDSFLHQFTQSPNQAYAVYMAGLTNAATGDNFIQDFFGIDRATRET 136 Query: 157 ----LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 +V + NSPY + A + ++ LA E+EI ++Y KR +VA R Sbjct: 137 TSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKAWVAVANR 196 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +L Y D + E + + EAY + L A + +I Sbjct: 197 VVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKII 237 >gi|323143513|ref|ZP_08078193.1| outer membrane assembly lipoprotein YfiO [Succinatimonas hippei YIT 12066] gi|322416707|gb|EFY07361.1| outer membrane assembly lipoprotein YfiO [Succinatimonas hippei YIT 12066] Length = 264 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 16/247 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + KF L + AV ++D + D Y V + A + +F +A + Sbjct: 12 MIKFFLPLIVGAAVALTACSSANYNKDEVPNIAPDAMY--SVAQNA---MASGDFQRAKQ 66 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 Y +PF +A + L +V Y ++ ++ ++ P S+ DYV Y+ G Sbjct: 67 YLEAIDSRYPFGELADQVQLDLIYVYYKMRDSEKTSAQINRFMRLNPTSQYTDYVMYMTG 126 Query: 139 MSYAQMIRDVPYD----QRATKLMLQY------MSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ QM D+ D R+ K QY ++E Y S Y A + + Q Sbjct: 127 LNQIQMRSDILQDFIGLNRSQKDPTQYYEALKTFRNLIETYPESKYAADAHQRMIFIKQQ 186 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA +E+ I YY +RG Y++ I Q +L +Y ++ E A+A + Y L L + A Sbjct: 187 LAEREMAIANYYYERGSYLSTIRHCQNILYSYRGTQYLEPALALMARCYDDLGLPEAAAN 246 Query: 249 VVSLIQE 255 S +QE Sbjct: 247 ARS-VQE 252 >gi|226941138|ref|YP_002796212.1| ComL [Laribacter hongkongensis HLHK9] gi|226716065|gb|ACO75203.1| ComL [Laribacter hongkongensis HLHK9] Length = 263 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 15/206 (7%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L N+++A + + +P+ A+++ + A+ + + + + + Sbjct: 34 KLYSEARDELNSGNYTRAIKLYETLEARYPYGRYAQQAQMDLAYAHFKDQEPALSLAAAD 93 Query: 119 EYITQYPESKNVDYVYYLVGM-----------SYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +I +P NVDYVYYL G+ Y R D +A + +V Sbjct: 94 RFIKLHPAHPNVDYVYYLKGLVNYNEDGGILSKYTGQDR-AERDPKAAREAFTSFRDLVV 152 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 R+ +S Y AR + + LA E+ + RYY++R Y+AA R Q ++ + D+ E Sbjct: 153 RFPDSRYAPDARVKMQNLVDGLAEHELFVARYYMRRSAYLAAANRAQGMIKEFPDSPFVE 212 Query: 228 EAMARLVEAYVALA---LMDEAREVV 250 E+ A +V AY L L D+ R V+ Sbjct: 213 ESFAIMVTAYDKLGKTTLRDDTRRVL 238 >gi|315126098|ref|YP_004068101.1| TPR repeat-containing lipoprotein [Pseudoalteromonas sp. SM9913] gi|315014612|gb|ADT67950.1| TPR repeat-containing lipoprotein [Pseudoalteromonas sp. SM9913] Length = 254 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 56/237 (23%), Positives = 112/237 (47%), Gaps = 12/237 (5%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 ++ K A I FS++V L S+ D R + +YE A L +++A Sbjct: 4 KIGKRAFAIVFSVSVLSLGACS--SAPDQEDIQRVPNRSAQALYEDAKQTLDSGLYARAI 61 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E +PF +++ + + Y +G +QA + + +I P K++DY+YY+ Sbjct: 62 ELLTAIDSRYPFGPFSKQVQMDLVYAHYQSGNTEQALATIDRFIRLNPNHKDLDYMYYMR 121 Query: 138 GMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+ + ++ D + T++ +S +V+R+ S Y A+ + N Sbjct: 122 GLVNIKADKNAFQEYFGVDRADRDAKRTRVAYTDLSTLVKRFPESDYAPEAKRRLVWLLN 181 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 ++A E+++ YY +R Y+AA R + V+ +YS + + + A+A + ++Y L L + Sbjct: 182 RMARYELKVATYYYEREAYLAAANRGKYVVEHYSQSSYLDAALAMMEKSYEKLGLTE 238 >gi|253990667|ref|YP_003042023.1| outer membrane protein assembly complex subunit YfiO [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782117|emb|CAQ85281.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 243 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 12/206 (5%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y L++ N+ A +PF +++ L + Y + A + + Sbjct: 34 EIYSAGQEKLRDGNYKAAITQLETLDNRYPFGPYSQQVQLDLIYAYYKSSDLPMALASID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-----------DQRATKLMLQYMSRIVE 167 ++ P N+DYV Y+ G++ +Q + D D + + S++V Sbjct: 94 RFMRLNPTHPNIDYVLYMRGLT-SQALDDSTLQSFFGIDRSDRDPEHARASFRDFSQLVR 152 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y NS Y AR + + +LA E+ + +YY KRG YVA + R + +L +Y D + Sbjct: 153 HYPNSLYAADARKRLMFIKERLAKYELSVVKYYNKRGAYVAVVNRAEQMLHDYPDTQSTL 212 Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253 +A+ + AY L L +A +V LI Sbjct: 213 KALPYMERAYTRLGLTAQADKVTKLI 238 >gi|271501680|ref|YP_003334706.1| outer membrane assembly lipoprotein YfiO [Dickeya dadantii Ech586] gi|270345235|gb|ACZ78000.1| outer membrane assembly lipoprotein YfiO [Dickeya dadantii Ech586] Length = 243 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 26/243 (10%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A T+ ++A C +S+D D R E+Y A L++ NF A Sbjct: 10 AATLSLTLAGC-------SNSKDAVPD-----RPPSELYATAQEKLQDGNFKAAITQLEA 57 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +PF +++ L + Y + + A + + +I P NVDYV Y+ G++ Sbjct: 58 LDNRYPFGPYSQQVQLDLIYAYYKSAELPLAQASIDRFIRLNPTHPNVDYVLYMRGLT-- 115 Query: 143 QMIRD------------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 M +D D + + + +++++ Y NS Y + + +LA Sbjct: 116 NMAQDDSALQGFFGVDRSDRDPQYARAAFKAFNQLLQGYPNSQYATDTSKRLAFLKERLA 175 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 E+ + +YY KRG YVA + R + +L +Y D + A+ + AY L L EA +V Sbjct: 176 KYELSVAQYYTKRGAYVAVVNRVEQMLKDYPDTQATRTALPLMENAYRELRLTAEADKVA 235 Query: 251 SLI 253 +I Sbjct: 236 RII 238 >gi|187923830|ref|YP_001895472.1| outer membrane assembly lipoprotein YfiO [Burkholderia phytofirmans PsJN] gi|187715024|gb|ACD16248.1| outer membrane assembly lipoprotein YfiO [Burkholderia phytofirmans PsJN] Length = 286 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L +F K +YF PF A+++ + A+ + + A Sbjct: 55 NNKLYTEANDALSGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNENAAADQA 114 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ ++ Y YYL GM + Q + + D ++ + Sbjct: 115 IDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPKSLRESYDAFKV 172 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V++Y NS Y A + N LA+ EV YY +RG YVAAI R QL L Y +A Sbjct: 173 VVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALTQYKNAP 232 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ ++ +Y L L D+ + V++ Sbjct: 233 AIEDALHIMMLSYEKLNQPQLADDTKRVLA 262 >gi|261820450|ref|YP_003258556.1| outer membrane protein assembly complex subunit YfiO [Pectobacterium wasabiae WPP163] gi|261604463|gb|ACX86949.1| outer membrane assembly lipoprotein YfiO [Pectobacterium wasabiae WPP163] Length = 244 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 15/222 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 +S+D DS E+Y A L++ NF A +PF +++ L Sbjct: 23 NSKDAVPDSPP-----SEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQVQLDLI 77 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151 + Y + + A + + ++ P NVDYV Y+ G++ + + D Sbjct: 78 YAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVDRSDRD 137 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + + S++++ Y NS Y A + + +LA E+ + +YY KRG YVA + Sbjct: 138 PQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRGAYVAVVN 197 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 R + +L +Y D + + A+ + AY L L +A +V +I Sbjct: 198 RVEQMLRDYPDTQATKNALPLMESAYRELQLAAQADKVAKVI 239 >gi|170692347|ref|ZP_02883510.1| putative competence lipoprotein, ComL [Burkholderia graminis C4D1M] gi|170142777|gb|EDT10942.1| putative competence lipoprotein, ComL [Burkholderia graminis C4D1M] Length = 286 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L +F K +YF PF A+++ + A+ + + A Sbjct: 55 NNKLYTEANDALSGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNEAAAADQA 114 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ ++ Y YYL GM + Q + + D ++ + Sbjct: 115 IDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPKSLRESYDAFKV 172 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY NS Y A + N LA+ EV YY +RG YVAAI R QL L Y +A Sbjct: 173 VVDRYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALKEYKNAP 232 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ ++ +Y L L D+ + V++ Sbjct: 233 AIEDALHIMMLSYQRLNQPQLADDTKRVLA 262 >gi|209522217|ref|ZP_03270854.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. H160] gi|209497346|gb|EDZ97564.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. H160] Length = 286 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 55 NNKLYTEANDALTGGDWGKCAKYFELLEGRDPFGHFAQQAQINVAYCNWKDNENAAADQA 114 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ ++ Y YYL GM + Q + + D ++ + Sbjct: 115 IDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPKSLRESYDAFKV 172 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+R+ NS Y A + N LA+ EV YY +RG YVAAI R QL L +Y +A Sbjct: 173 VVDRFPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALRDYKNAP 232 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ ++ +Y L L D+ R V++ Sbjct: 233 AIEDALHIMILSYEKLNNQQLADDTRRVLA 262 >gi|50122270|ref|YP_051437.1| outer membrane protein assembly complex subunit YfiO [Pectobacterium atrosepticum SCRI1043] gi|49612796|emb|CAG76246.1| putative lipoprotein [Pectobacterium atrosepticum SCRI1043] Length = 244 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 15/222 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 +S+D DS E+Y A L++ NF A +PF +++ L Sbjct: 23 NSKDAVPDSPP-----SEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQVQLDLI 77 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151 + Y + + A + + ++ P NVDYV Y+ G++ + + D Sbjct: 78 YAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVDRSDRD 137 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + + S++++ Y NS Y A + + +LA E+ + +YY KRG YVA + Sbjct: 138 PQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRGAYVAVVN 197 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 R + +L +Y D + + A+ + AY L L +A +V +I Sbjct: 198 RVEQMLRDYPDTQATKNALPLMESAYRELQLAAQADKVAKVI 239 >gi|227329205|ref|ZP_03833229.1| outer membrane protein assembly complex subunit YfiO [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 244 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 15/222 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 +S+D DS E+Y A L++ NF A +PF +++ L Sbjct: 23 NSKDAVPDSPP-----SEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQVQLDLI 77 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151 + Y + + A + + ++ P NVDYV Y+ G++ + + D Sbjct: 78 YAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVDRSDRD 137 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + + S++++ Y NS Y A + + +LA E+ + +YY KRG YVA + Sbjct: 138 PQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRGAYVAVVN 197 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 R + +L +Y D + + A+ + AY L L +A +V +I Sbjct: 198 RVEQMLRDYPDTQATKTALPLMENAYRELQLAAQADKVAKVI 239 >gi|323526135|ref|YP_004228288.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. CCGE1001] gi|323383137|gb|ADX55228.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. CCGE1001] Length = 286 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L +F K +YF PF A+++ + A+ + + A Sbjct: 55 NNKLYTEANDALNGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 114 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ ++ Y YYL GM + Q + + D ++ + Sbjct: 115 IDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPKSLRESYDAFKV 172 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V++Y NS Y A + N LA+ EV YY +RG YVAAI R QL L Y +A Sbjct: 173 VVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALKEYKNAP 232 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ ++ +Y L L D+ + V++ Sbjct: 233 AIEDALHIMMLSYQKLNQPQLADDTKRVLA 262 >gi|251793937|ref|YP_003008669.1| lipoprotein [Aggregatibacter aphrophilus NJ8700] gi|247535336|gb|ACS98582.1| lipoprotein [Aggregatibacter aphrophilus NJ8700] Length = 264 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 20/246 (8%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 +L FAL ++AV G S +DV + ++ +Y +L+E ++S+A Sbjct: 3 KLKSFALLTAMALAVTACSG----SKQDV------EQAPEQTLYSIGQNYLQEGDYSQAI 52 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 Y + FP + + + L + Y + Y + + +I ++P S ++DY Y+ Sbjct: 53 RYLTAVNNRFPGSSYSEQVQLNLIYAYYKSQDYTETLVTVDRFIQRFPNSNHLDYALYMA 112 Query: 138 GMSYAQMIRDVPYD----QRAT------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G++ + + + D RAT K +V+ + NSPY A + + Sbjct: 113 GLTNSALGDNFFQDFFGVDRATRENTSIKTAFANFQTLVQHFPNSPYTPDALARMAYIKA 172 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 LA E++I ++Y KR YVA R +L Y D + +A+ + E+Y + L A Sbjct: 173 SLARHELDIAKFYFKRDAYVATANRVVSMLKLYPDTQATLDALPLMKESYERMNLKQLAD 232 Query: 248 EVVSLI 253 + +I Sbjct: 233 QTARII 238 >gi|115377512|ref|ZP_01464712.1| NrfG protein, putative [Stigmatella aurantiaca DW4/3-1] gi|310820081|ref|YP_003952439.1| competence lipoprotein ComL [Stigmatella aurantiaca DW4/3-1] gi|115365452|gb|EAU64487.1| NrfG protein, putative [Stigmatella aurantiaca DW4/3-1] gi|309393153|gb|ADO70612.1| competence lipoprotein ComL [Stigmatella aurantiaca DW4/3-1] Length = 258 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 14/202 (6%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 L+ +++ KA +YF FP+ ++ + L A V + ++ +A +I YP Sbjct: 46 LEGRDYFKAEKYFEFVKTKFPYLEASKTAELRLADVDFVQDRFPEAREKYNAFIKAYPTH 105 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYD-----------QRATKLMLQYMSRIVERYTNSPYVK 176 VDY Y V +S+ + D+P D Q + L+ ++ + +Y +S Y Sbjct: 106 PQVDYAAYQVALSH---VEDMPSDFFLLPPSEEKDQTEVQSALRALNDFLRQYPDSQYTP 162 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 AR + +LA E+ + +Y KR + A R + +L+ Y ++ E A+ L EA Sbjct: 163 QARVQADDAKRRLAEHELYVAAFYRKRERWRAVAQRLEGMLSRYPGTKYEESALFSLHEA 222 Query: 237 YVALALMDEAREVVSLIQERYP 258 YV L A+E + + +R P Sbjct: 223 YVKLKEPTRAQETLRQVIQRLP 244 >gi|256828931|ref|YP_003157659.1| outer membrane assembly lipoprotein YfiO [Desulfomicrobium baculatum DSM 4028] gi|256578107|gb|ACU89243.1| outer membrane assembly lipoprotein YfiO [Desulfomicrobium baculatum DSM 4028] Length = 237 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 88/169 (52%), Gaps = 4/169 (2%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +E++E A F++++ +++A + + + +PF+ A ++ LM A KY +A Sbjct: 33 QELFENARGFMQDKEYAEAADSLTKLNDRYPFSPYATEARLMLADAYALDSKYLEAVDAY 92 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIR--DVPYDQRATKLMLQYMSRIVERYTNSPYV 175 EE++ +P +++DYV + +G++ R D+P+ Q + + R+V Y S Y Sbjct: 93 EEFLNMHPRHESIDYVLFQIGVNKYNSHRSIDLPHTQLGEAV--ESFRRLVSGYPKSIYR 150 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + A Y+ R +A E+ + +Y K G Y AA R+ ++ N+ + E Sbjct: 151 EQALDYIVKCRKLMAEHEMFVADFYFKSGSYNAAWTRYVYIIDNFPELE 199 >gi|323491102|ref|ZP_08096292.1| putative lipoprotein [Vibrio brasiliensis LMG 20546] gi|323314649|gb|EGA67723.1| putative lipoprotein [Vibrio brasiliensis LMG 20546] Length = 241 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 18/245 (7%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 T+ +A+ LVG SS +V V DV E+Y +A + L+ N+ A + Sbjct: 5 TLSGLLALSVLVGC--SSSEEV----VPDVP-PSELYSEAQVSLQSGNWLTAIDKLEALD 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +PF + + L + Y + E + P + +D+V Y+ G+++ Sbjct: 58 SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKLDWVLYMRGLTHMAQ 117 Query: 145 IRDVPYDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 R+ +D T K +++ERY +SPY + ++ + +N+LA ++ Sbjct: 118 DRNFMHDLLNTDRSDRDPEPVKKAFADFKKLLERYPDSPYAEDSQKRMYALKNRLAKYDL 177 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +YL+R ++AAI R Q + Y D E A +++ +EAY L L D + +I Sbjct: 178 ATADFYLRREAWIAAINRTQELQKTYPDTEAARQSLEIQLEAYKQLGLEDAVQRTQKMI- 236 Query: 255 ERYPQ 259 E PQ Sbjct: 237 ELNPQ 241 >gi|126666671|ref|ZP_01737648.1| DNA uptake lipoprotein [Marinobacter sp. ELB17] gi|126628716|gb|EAZ99336.1| DNA uptake lipoprotein [Marinobacter sp. ELB17] Length = 265 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 10/209 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A + NF++A + +PF A ++ L F +Y + A + + + Sbjct: 23 YENARSAMNSGNFNEAETNLDALETYYPFGRYAEQAQLDLIFARYQNLDLEGARAAADRF 82 Query: 121 ITQYPESKNVDYVYYLVGM-SYAQMIR------DVPYDQRATKLMLQYM---SRIVERYT 170 + P+S++ DY ++ G+ SY I + + RA LQ S ++ RY Sbjct: 83 LRLNPQSEHGDYALFMRGLASYNLDIGLAARYFPIEANARAPGEQLQAFRDFSELLNRYP 142 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 +S Y AR + RN++A E+ RYY+ R Y+AA R + V+ NY + EEA+ Sbjct: 143 DSLYAADARQRMIAVRNRMAELELHAARYYITREAYIAANNRARYVVENYPSSPVVEEAI 202 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQ 259 L E + L + +++ ++L++ +P Sbjct: 203 IILAETFRFLDIKKGSQDAIALLRTNFPD 231 >gi|296157779|ref|ZP_06840613.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. Ch1-1] gi|295892025|gb|EFG71809.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. Ch1-1] Length = 286 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L +F K +YF PF A+++ + A+ + + A Sbjct: 55 NNKLYTEANDALTGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNENAAADQA 114 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ ++ Y YYL GM + Q + + D ++ + Sbjct: 115 IDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPKSLRESYDAFKI 172 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V++Y NS Y A + N LA+ EV YY +RG YVAAI R QL L Y +A Sbjct: 173 VVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALTQYKNAP 232 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ ++ +Y L L D+ + V++ Sbjct: 233 AIEDALHIMMLSYQRLNQPQLADDTKRVLA 262 >gi|118602522|ref|YP_903737.1| putative transmembrane protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567461|gb|ABL02266.1| putative transmembrane protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 253 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 18/248 (7%) Query: 22 FALTIFFSIAV--CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 F + F ++ + CF W+ ++ R+ S+T ++ + +A + KA E Sbjct: 5 FIILPFLTLLLNGCF---WQEEAKRE----SITKGWLPKKFFAQAKEEASSGSTDKAIEI 57 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F Q +P + A +S L A+ Y + Y QA YI YPE + Y YYL G Sbjct: 58 FEQLQAAYPGSKYALQSKLEIAYALYKSKDYNQAIDRLNSYIKLYPEHFSTPYAYYLRGA 117 Query: 140 SYAQMIRDVPYD------QR---ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 R D QR + + Y ++ ++ + Y + A+ ++ + RN L+ Sbjct: 118 VSQDKSRSFLDDYLTDSAQRDVNSVRDAFNYYLALIYKFPKTEYAEEAKIHLVILRNILS 177 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 E+ + YY KRG +AAI R + ++ Y + A+ + Y A++ A++ Sbjct: 178 RHELFVAIYYTKRGANIAAINRTKFIIEKYPNTPSVPAALHLMAYNYDAISANILAKDAR 237 Query: 251 SLIQERYP 258 +++ YP Sbjct: 238 RVLKNSYP 245 >gi|91783469|ref|YP_558675.1| putative competence lipoprotein, ComL [Burkholderia xenovorans LB400] gi|91687423|gb|ABE30623.1| Putative competence lipoprotein, ComL [Burkholderia xenovorans LB400] Length = 286 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L +F K +YF PF A+++ + A+ + + A Sbjct: 55 NNKLYTEANDALTGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNENAAADQA 114 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ ++ Y YYL GM + Q + + D ++ + Sbjct: 115 IDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPKSLRESYDAFKI 172 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V++Y NS Y A + N LA+ EV YY +RG YVAAI R QL L Y +A Sbjct: 173 VVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALTQYKNAP 232 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ ++ +Y L L D+ + V++ Sbjct: 233 AIEDALHIMMLSYQRLNQPQLADDTKRVLA 262 >gi|229525358|ref|ZP_04414763.1| hypothetical protein VCA_002980 [Vibrio cholerae bv. albensis VL426] gi|229338939|gb|EEO03956.1| hypothetical protein VCA_002980 [Vibrio cholerae bv. albensis VL426] Length = 253 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 11/216 (5%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D V DV ++Y +A L+ + A E +PF + + L + Y Sbjct: 35 DVVPDVP-PSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKND 93 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLM 158 + E + P + +D+V Y+ G+++ R+ +D K Sbjct: 94 DLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAA 153 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++++RY NSPY + A+ + +N+LA ++ +YL+R ++AAI R Q + Sbjct: 154 FADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQK 213 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 Y D E A +++A +EAY L L D L+Q Sbjct: 214 TYPDTEAARKSLAIQLEAYQQLGLTDAIERTKQLMQ 249 >gi|307729590|ref|YP_003906814.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. CCGE1003] gi|307584125|gb|ADN57523.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. CCGE1003] Length = 286 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 55 NNKLYTEANDALNGGDYGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 114 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ ++ Y YYL GM + Q + + D ++ + Sbjct: 115 IDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPKSLRESYDAFKV 172 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY NS Y A + N LA+ EV YY +RG YVAAI R QL L Y +A Sbjct: 173 VVDRYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALKEYKNAP 232 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ ++ +Y L L D+ + V++ Sbjct: 233 AIEDALHIMMLSYEKLNQPQLADDTKRVLA 262 >gi|91227646|ref|ZP_01261923.1| hypothetical protein V12G01_13214 [Vibrio alginolyticus 12G01] gi|91188425|gb|EAS74719.1| hypothetical protein V12G01_13214 [Vibrio alginolyticus 12G01] Length = 242 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 10/206 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A + L+ N+ A E +PF + + L + Y + Sbjct: 32 ELYADAQISLQSGNWLSAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIS 91 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168 ++ P + +D+V Y+ G+S+ R+ +D K ++++R Sbjct: 92 RFMRLNPTHEKMDWVLYMRGLSHMAQDRNFMHDLFSVDRSDRDPEPVKKAFDDFKKLLQR 151 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NSPY + ++ + +N+LA ++ +YL+R +VAAI R Q + Y D E A + Sbjct: 152 YPNSPYAEDSQKRMVALKNRLANYDLATADFYLRREAWVAAINRSQELQKAYPDTEAARK 211 Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254 ++ +EAY L L D LI+ Sbjct: 212 SLTIQLEAYKQLGLEDAVARTEKLIE 237 >gi|157369128|ref|YP_001477117.1| outer membrane protein assembly complex subunit YfiO [Serratia proteamaculans 568] gi|157320892|gb|ABV39989.1| putative lipoprotein [Serratia proteamaculans 568] Length = 243 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 11/215 (5%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D+V D E+Y A L++ NF A +PF +++ L + Y + Sbjct: 25 DAVPD-NPPSEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQLDLIYAYYKSA 83 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158 A + + ++ P N+DYV Y+ G++ + + D + + Sbjct: 84 DLPLAQASIDRFMRLNPTHPNIDYVMYMRGLTDMALDDSALQGFFGVDRSDRDPQHARAA 143 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + S+++++Y NS YV A + +++LA E+ + YY KRG YVA + R + +L Sbjct: 144 FRDFSQLIQQYPNSQYVTDANKRLVYLKDRLAKYELSVVEYYTKRGAYVAVVNRAEQMLR 203 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 Y D + +A+ + AY L L +A +V +I Sbjct: 204 EYPDTKATRDALPLMENAYKQLQLNGQADKVAKVI 238 >gi|294788952|ref|ZP_06754192.1| competence lipoprotein ComL [Simonsiella muelleri ATCC 29453] gi|294483054|gb|EFG30741.1| competence lipoprotein ComL [Simonsiella muelleri ATCC 29453] Length = 268 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 10/245 (4%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 +F + V L G S+ +T ++Y +A L N+++A + + Sbjct: 5 LFSVVVVAALSGCAANQSKISKDAQITQNWTADQLYSEARNELNSGNYTRATKLYELLRA 64 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM------ 139 P +SLL +A+ QY + ++A + YP S+++DY YL G+ Sbjct: 65 RQPEGRYIEQSLLDTAYAQYKNEEPEKALIALARFKQNYPASRDMDYALYLKGLVLFAEE 124 Query: 140 -SYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 S+ + + + D + + +V++Y S Y A + + L E+ Sbjct: 125 QSFLRKLASQDWADRDPASNRKAYYAFEELVKKYPTSKYAADATKRMAKLVDALGGHEIA 184 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 I RYY KRG YVAA R Q V+ N+ + EE++A ++ Y + A +V ++Q Sbjct: 185 IARYYAKRGAYVAANNRAQRVIENFQNTRFVEESLAIMIFTYKKMDKPRLAEDVRQVLQH 244 Query: 256 RYPQG 260 +P Sbjct: 245 NFPNS 249 >gi|238027089|ref|YP_002911320.1| putative competence lipoprotein ComL [Burkholderia glumae BGR1] gi|237876283|gb|ACR28616.1| Putative competence lipoprotein ComL [Burkholderia glumae BGR1] Length = 281 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L +++ K +YF PF A+++ + A+ + + A Sbjct: 49 NNKLYSEAQDALTGRDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNELTAADQA 108 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ ++ Y YYL GM + Q + + D +A + Sbjct: 109 VDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPQALRESYDAFKI 166 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY S Y A + N LA+ EV YY +RG YVAAI R QL + Y +A Sbjct: 167 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAITQYKNAP 226 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ ++ +Y L L D+ + V++ Sbjct: 227 AIEDALHIMMLSYTRLNQPQLADDTKRVLA 256 >gi|295676472|ref|YP_003604996.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. CCGE1002] gi|295436315|gb|ADG15485.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. CCGE1002] Length = 286 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 55 NNKLYTEANDALTGGDWGKCAKYFELLEGRDPFGHFAQQAQINVAYCNWKDNENAAADQA 114 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ ++ Y YYL GM + Q + + D ++ + Sbjct: 115 IDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPKSLRESYDAFKV 172 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+R+ NS Y A + N LA+ EV YY +RG YVAAI R QL L Y +A Sbjct: 173 VVDRFPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALREYKNAP 232 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ ++ +Y L L D+ R V++ Sbjct: 233 AIEDALHIMILSYEKLNNQQLADDTRRVLA 262 >gi|322831461|ref|YP_004211488.1| outer membrane assembly lipoprotein YfiO [Rahnella sp. Y9602] gi|321166662|gb|ADW72361.1| outer membrane assembly lipoprotein YfiO [Rahnella sp. Y9602] Length = 244 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 17/229 (7%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94 LVG SS++ D+ +V +Y A L++ NF A +PF ++ Sbjct: 17 LVGCS--SSKETVPDNPPNV-----LYATAQQKLQDGNFKGAIAQLEALDNRYPFGPYSQ 69 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---------- 144 + L + Y + A + + ++ P N+DYV Y+ G++ + Sbjct: 70 QVQLDLIYAYYKSADLPMAQASIDRFMRLNPTHPNIDYVMYMRGLTDMALDDSALQGFFG 129 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + D + + + S+++ Y NS Y A + +++LA E+ + +YY KRG Sbjct: 130 VDRSDRDPQHARAAFRDFSQLIHTYPNSQYATDATKRLVFLKDRLAKYELSVVQYYTKRG 189 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 YVA + R + +L +Y D + +A+ + AY L L +A +V +I Sbjct: 190 AYVAVVNRVEQMLKDYPDTKATHDALPLMENAYRELQLNTQADKVAKII 238 >gi|242279291|ref|YP_002991420.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio salexigens DSM 2638] gi|242122185|gb|ACS79881.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio salexigens DSM 2638] Length = 243 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/197 (23%), Positives = 92/197 (46%), Gaps = 9/197 (4%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 +F S++ C ++ + +L D +E++E V +K++ + A EYF++ Sbjct: 14 LFISLSGCGVIDY-------YFLPKPEDT--AQELFEAGVQAMKDKEYFDATEYFSKLKD 64 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +PF+ K+ + + KY A+ +E+ +P + + YV Y +G+S + Sbjct: 65 RYPFSPYTVKAEISLGDAYFLDKKYFDASEAYKEFAALHPGNDEIPYVLYQIGLSNFNLF 124 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 + Q L+Y R+ E Y + Y K A+ Y+ R LA E+ I ++ + + Sbjct: 125 SSIDRPQSNITEALEYFYRVEEAYPETQYAKSAKEYIVKCRRALADHELYIADFFWRSSK 184 Query: 206 YVAAIPRFQLVLANYSD 222 + +A R+ V+ N+ D Sbjct: 185 FGSAWKRYAYVVRNFKD 201 >gi|330817149|ref|YP_004360854.1| Putative competence lipoprotein ComL [Burkholderia gladioli BSR3] gi|327369542|gb|AEA60898.1| Putative competence lipoprotein ComL [Burkholderia gladioli BSR3] Length = 281 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 49 NNKLYSEAQDALNGSDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNEASAADQA 108 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ ++ Y YYL GM + Q + + D +A + Sbjct: 109 VDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPQALRESYDAFKI 166 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY S Y A + N LA+ EV YY +RG YVAAI R QL + Y +A Sbjct: 167 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAITQYKNAP 226 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ +V +Y L L D+ + V++ Sbjct: 227 AIEDALHIMVLSYGRLNQPQLADDTKRVLA 256 >gi|317049250|ref|YP_004116898.1| outer membrane assembly lipoprotein YfiO [Pantoea sp. At-9b] gi|316950867|gb|ADU70342.1| outer membrane assembly lipoprotein YfiO [Pantoea sp. At-9b] Length = 243 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 17/229 (7%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94 LVG S+D DS E+Y A L++ NF A + +PF ++ Sbjct: 17 LVGCS--GSKDTVPDSPP-----SEIYATAQQKLQDGNFKAAIKQLEALDNRYPFGPYSQ 69 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---------- 144 + L + Y A + ++ P N+DYV Y+ G++ + Sbjct: 70 QVQLDLIYAYYKNADLPLAQAAIARFMRLNPTHPNIDYVIYMKGLTDMALDDSALQGFFG 129 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 I D + + S+++ Y NS Y A+ + + +LA E+ + ++Y KRG Sbjct: 130 IDRSDRDPTHARDAFRDFSQLLRGYPNSQYAADAQKRLVFLKERLAKYELSVAQFYTKRG 189 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 YVA + R + ++ +Y D + EA+ + AY L L EA +V +I Sbjct: 190 AYVAVVNRVEGMMKDYPDTQATHEALPLMENAYRQLQLTAEADKVAKII 238 >gi|320539056|ref|ZP_08038730.1| putative outer membrane protein assembly lipoprotein [Serratia symbiotica str. Tucson] gi|320030896|gb|EFW12901.1| putative outer membrane protein assembly lipoprotein [Serratia symbiotica str. Tucson] Length = 241 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 102/237 (43%), Gaps = 17/237 (7%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 ++A LV +S+D D+ E+Y A +++ NF A Sbjct: 7 LVAVATLSLVLAGCSTSKDAVPDNPPS-----EIYATAQQKMQDGNFKGAITQLEALDNR 61 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 +PF +++ L + Y + A + + +I P N+DYV Y+ G+ A M Sbjct: 62 YPFGPYSQQVQLYLIYAYYKSADLPLAQASIDRFIRLNPTHPNIDYVMYMRGL--ADMAL 119 Query: 147 DVPYDQ------RATKLMLQ----YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 D Q R+ + L + ER NS YV A + +++LA E+ + Sbjct: 120 DDSTLQGFFGIDRSDRDPLHARAAFRDFSQERSPNSQYVTDANKRLVYLKDRLAKYELSV 179 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 YY KRG YVAAI R + +L Y D + +A+ + AY L L EA +V +I Sbjct: 180 VEYYTKRGAYVAAINRVEQMLREYPDTKATRDALPLMERAYKRLQLNSEAEKVAKVI 236 >gi|53723512|ref|YP_102985.1| competence lipoprotein ComL [Burkholderia mallei ATCC 23344] gi|52426935|gb|AAU47528.1| competence lipoprotein ComL [Burkholderia mallei ATCC 23344] Length = 280 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 49 NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETATADQA 108 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ +V Y YYL GM + Q + + D +A + Sbjct: 109 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKA 166 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY S Y A + N LA+ EV YY +RG YVAAI R QL + Y +A Sbjct: 167 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 226 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ ++ +Y L L D+ + V++ Sbjct: 227 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 256 >gi|121599824|ref|YP_993133.1| competence lipoprotein ComL [Burkholderia mallei SAVP1] gi|124384405|ref|YP_001026091.1| competence lipoprotein ComL [Burkholderia mallei NCTC 10229] gi|126449169|ref|YP_001080639.1| competence lipoprotein ComL [Burkholderia mallei NCTC 10247] gi|167002221|ref|ZP_02268011.1| competence lipoprotein ComL [Burkholderia mallei PRL-20] gi|238562639|ref|ZP_00440110.2| competence lipoprotein ComL [Burkholderia mallei GB8 horse 4] gi|254178609|ref|ZP_04885264.1| competence lipoprotein ComL [Burkholderia mallei ATCC 10399] gi|254199930|ref|ZP_04906296.1| competence lipoprotein ComL [Burkholderia mallei FMH] gi|254206263|ref|ZP_04912615.1| competence lipoprotein ComL [Burkholderia mallei JHU] gi|254358322|ref|ZP_04974595.1| competence lipoprotein ComL [Burkholderia mallei 2002721280] gi|121228634|gb|ABM51152.1| competence lipoprotein ComL [Burkholderia mallei SAVP1] gi|124292425|gb|ABN01694.1| competence lipoprotein ComL [Burkholderia mallei NCTC 10229] gi|126242039|gb|ABO05132.1| competence lipoprotein ComL [Burkholderia mallei NCTC 10247] gi|147749526|gb|EDK56600.1| competence lipoprotein ComL [Burkholderia mallei FMH] gi|147753706|gb|EDK60771.1| competence lipoprotein ComL [Burkholderia mallei JHU] gi|148027449|gb|EDK85470.1| competence lipoprotein ComL [Burkholderia mallei 2002721280] gi|160699648|gb|EDP89618.1| competence lipoprotein ComL [Burkholderia mallei ATCC 10399] gi|238522243|gb|EEP85689.1| competence lipoprotein ComL [Burkholderia mallei GB8 horse 4] gi|243062039|gb|EES44225.1| competence lipoprotein ComL [Burkholderia mallei PRL-20] Length = 274 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 43 NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETATADQA 102 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ +V Y YYL GM + Q + + D +A + Sbjct: 103 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKA 160 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY S Y A + N LA+ EV YY +RG YVAAI R QL + Y +A Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 220 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ ++ +Y L L D+ + V++ Sbjct: 221 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 250 >gi|329297085|ref|ZP_08254421.1| outer membrane biogenesis protein BamD [Plautia stali symbiont] Length = 246 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 20/241 (8%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A T+ S+A LVG S D V D E+Y A L++ NF A + Sbjct: 10 AATLSLSLA---LVGCSGSS------DPVPDSP-PSEIYATAQQKLQDGNFKAAIKQLEA 59 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +PF +++ L + Y A + ++ P N+DYV Y+ G++ Sbjct: 60 LDNRYPFGPYSQQVQLDLIYAYYKNTDLPLAQAAISRFMRLNPTHPNIDYVIYMKGLTDM 119 Query: 143 QM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 + I D + + S+++ Y N Y A+ +T ++ LA Sbjct: 120 ALDDSALQDFFGIDRSDRDPTHARDAFRDFSQLLRGYPNCQYAADAQKRLTFLKDSLAKY 179 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E+ + ++Y KRG YVA + R + ++ +Y D + +A+ + AY L L EA +V + Sbjct: 180 ELSVAQFYTKRGAYVAVVNRVEGMMRDYPDTQATRDALPLMENAYRQLQLTTEADKVAKI 239 Query: 253 I 253 I Sbjct: 240 I 240 >gi|126438751|ref|YP_001059204.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 668] gi|126218244|gb|ABN81750.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 668] Length = 274 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 43 NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 102 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ +V Y YYL GM + Q + + D +A + Sbjct: 103 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKA 160 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY S Y A + N LA+ EV YY +RG YVAAI R QL + Y +A Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 220 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ ++ +Y L L D+ + V++ Sbjct: 221 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 250 >gi|88800778|ref|ZP_01116335.1| competence lipoprotein ComL, putative [Reinekea sp. MED297] gi|88776484|gb|EAR07702.1| competence lipoprotein ComL, putative [Reinekea sp. MED297] Length = 277 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 18/213 (8%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A +L+++N+S A E FPF A S L + Y + A + + Sbjct: 39 YETAQEYLEKRNYSMAVERLTALRDRFPFGRYADASALDLMYAYYGMNDFANALVEADRF 98 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMI--------------RDVPYDQRATKLMLQYMSRIV 166 E +VDY +++ MSY ++ R Q+A + + Q+ +R Sbjct: 99 TRLNSEHPDVDYAWFVRSMSYYELFLTNRGILGKADPAKRSAEQGQKAFRALSQFTAR-- 156 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 Y +S Y A + + ++ LA E+ + YY++R ++AA R + V+ +Y Sbjct: 157 --YPDSRYRPEALDAMVILKDALARHELVVADYYIRREAWIAAAERAKTVVEHYPGVTAV 214 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +A+ L+EAY AL + + V+S + YP Sbjct: 215 GDALVVLIEAYDALDMPTDRSLVLSRLTNDYPD 247 >gi|254189037|ref|ZP_04895548.1| putative competence lipoprotein ComL [Burkholderia pseudomallei Pasteur 52237] gi|157936716|gb|EDO92386.1| putative competence lipoprotein ComL [Burkholderia pseudomallei Pasteur 52237] Length = 274 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 43 NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 102 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ +V Y YYL GM + Q + + D +A + Sbjct: 103 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKA 160 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY S Y A + N LA+ EV YY +RG YVAAI R QL + Y +A Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 220 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ ++ +Y L L D+ + V++ Sbjct: 221 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 250 >gi|124267193|ref|YP_001021197.1| putative transmembrane protein [Methylibium petroleiphilum PM1] gi|124259968|gb|ABM94962.1| putative transmembrane protein [Methylibium petroleiphilum PM1] Length = 274 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 13/177 (7%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQMI--------RDVP-Y 150 A+ Y + QA S E +I +P S +DY YYL G+ ++ + + +D+ Sbjct: 87 AYAYYKTNEKAQALSTIERFIKLHPSSPAIDYAYYLQGLINFNENLGLLGGLARQDLSER 146 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 DQ+A + Q ++ ++ NS Y A+ + N LA EV + RYY +RG YVAA Sbjct: 147 DQQAARDAYQSFRQLTLQFPNSKYTPDAQLRMNYIVNTLATYEVHVARYYYRRGAYVAAA 206 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 R Q + + A EEA+ L +Y L L + + ++Q +P+ +RYV+ Sbjct: 207 NRAQQAVQEFQRAPATEEALYILGISYDKLGLTELRDDAQRVLQTNFPE---SRYVK 260 >gi|254179572|ref|ZP_04886171.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 1655] gi|184210112|gb|EDU07155.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 1655] Length = 274 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 43 NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 102 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ +V Y YYL GM + Q + + D +A + Sbjct: 103 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKA 160 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY S Y A + N LA+ EV YY +RG YVAAI R QL + Y +A Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 220 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ ++ +Y L L D+ + V++ Sbjct: 221 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 250 >gi|183597511|ref|ZP_02959004.1| hypothetical protein PROSTU_00784 [Providencia stuartii ATCC 25827] gi|188023156|gb|EDU61196.1| hypothetical protein PROSTU_00784 [Providencia stuartii ATCC 25827] Length = 243 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 12/206 (5%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y L++ N+ A + +PF A++ L + Y + + A + + Sbjct: 34 EMYSIGQQKLQDGNYKAAIKQLEALDNRYPFGPYAQQVQLDLIYAYYKSAELPMAIAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDV-----------PYDQRATKLMLQYMSRIVE 167 ++ P N+DYV Y+ G++ A + D D + ++ + S++V Sbjct: 94 RFMRLNPTHPNIDYVLYMRGLT-AMALDDSLLQGFFGVDRSDRDPQHARVAFKDFSQLVR 152 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y NS Y A + +++LA ++ + YY KRG YVA + R Q +L +Y D E Sbjct: 153 YYPNSLYANDASKRLVYLKDRLARFDLSVVEYYNKRGAYVAVVNRVQQMLRDYPDTEATR 212 Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + L +EA +V +LI Sbjct: 213 NALKYMEIAYKQMGLDEEANKVANLI 238 >gi|262170004|ref|ZP_06037694.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio cholerae RC27] gi|262021738|gb|EEY40449.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio cholerae RC27] Length = 241 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 11/216 (5%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D V DV ++Y +A L+ + A E +PF + + L + Y Sbjct: 23 DVVPDVP-PSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKND 81 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLM 158 + E + P + +D+V Y+ G+++ R+ +D K Sbjct: 82 DLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAA 141 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++++RY NSPY + A+ + +N+LA ++ +YL+R ++AAI R Q + Sbjct: 142 FADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQK 201 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 Y D E A +++ +EAY L L D L+Q Sbjct: 202 TYPDTEAARQSLEIQLEAYQQLGLTDAVERTKQLMQ 237 >gi|28897332|ref|NP_796937.1| hypothetical protein VP0558 [Vibrio parahaemolyticus RIMD 2210633] gi|153839764|ref|ZP_01992431.1| lipoprotein, ComL family [Vibrio parahaemolyticus AQ3810] gi|260364019|ref|ZP_05776750.1| competence lipoprotein ComL [Vibrio parahaemolyticus K5030] gi|260876295|ref|ZP_05888650.1| competence lipoprotein ComL [Vibrio parahaemolyticus AN-5034] gi|260895102|ref|ZP_05903598.1| competence lipoprotein ComL [Vibrio parahaemolyticus Peru-466] gi|260903278|ref|ZP_05911673.1| competence lipoprotein ComL [Vibrio parahaemolyticus AQ4037] gi|28805541|dbj|BAC58821.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|149746717|gb|EDM57705.1| lipoprotein, ComL family [Vibrio parahaemolyticus AQ3810] gi|308088893|gb|EFO38588.1| competence lipoprotein ComL [Vibrio parahaemolyticus Peru-466] gi|308092865|gb|EFO42560.1| competence lipoprotein ComL [Vibrio parahaemolyticus AN-5034] gi|308107944|gb|EFO45484.1| competence lipoprotein ComL [Vibrio parahaemolyticus AQ4037] gi|308115633|gb|EFO53173.1| competence lipoprotein ComL [Vibrio parahaemolyticus K5030] gi|328472094|gb|EGF42971.1| hypothetical protein VP10329_03035 [Vibrio parahaemolyticus 10329] Length = 242 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 10/206 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A + L+ N+ A E +PF + + L + Y + Sbjct: 32 ELYADAQVSLQSGNWLSAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIS 91 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168 ++ P + +D+V Y+ G+S+ R+ +D K ++++R Sbjct: 92 RFMRLNPTHEKMDWVLYMRGLSHMAQDRNFMHDLFSIDRSDRDPEPVKKAFDDFKKLLQR 151 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NSPY + A+ + +N+LA ++ +YL+R ++AAI R Q + ++ D E A + Sbjct: 152 YPNSPYAEDAQKRMVALKNRLANYDLATADFYLRREAWIAAINRSQELQKSFPDTEAARK 211 Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254 ++ +EAY L L D +LI+ Sbjct: 212 SLEIQLEAYKQLQLEDAVARTEALIK 237 >gi|167836419|ref|ZP_02463302.1| competence lipoprotein ComL [Burkholderia thailandensis MSMB43] Length = 274 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 43 NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETASADQA 102 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ +V Y YYL GM + Q + + D +A + Sbjct: 103 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 160 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY S Y A + N LA+ EV YY +RG YVAAI R QL + Y +A Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 220 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ + +Y L L D+ + V++ Sbjct: 221 AIEDALHIMTLSYAKLNQPQLADDTKRVLA 250 >gi|147675286|ref|YP_001216200.1| putative lipoprotein [Vibrio cholerae O395] gi|146317169|gb|ABQ21708.1| putative lipoprotein [Vibrio cholerae O395] gi|227012533|gb|ACP08743.1| conserved hypothetical protein [Vibrio cholerae O395] Length = 253 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 11/216 (5%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D V DV ++Y +A L+ + A E +PF + + L + Y Sbjct: 35 DVVPDVP-PSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKND 93 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLM 158 + E + P + +D+V Y+ G+++ R+ +D K Sbjct: 94 DLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAA 153 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++++RY NSPY + A+ + +N+LA ++ +YL+R ++AAI R Q + Sbjct: 154 FADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQK 213 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 Y D E A +++ +EAY L L D L+Q Sbjct: 214 TYPDTEAARQSLEIQLEAYQQLGLTDAVERTKQLMQ 249 >gi|269966584|ref|ZP_06180665.1| putative lipoprotein [Vibrio alginolyticus 40B] gi|269828769|gb|EEZ83022.1| putative lipoprotein [Vibrio alginolyticus 40B] Length = 242 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 10/206 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A + L+ N+ A E +PF + + L + Y + Sbjct: 32 ELYADAQISLQSGNWLSAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIS 91 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168 ++ P + +D+V Y+ G+S+ R+ +D K ++++R Sbjct: 92 RFMRLNPTHEKMDWVLYMRGLSHMAQDRNFMHDLFSVDRSDRDPEPVKKAFDDFKKLLQR 151 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NSPY + ++ + +N+LA ++ +YL+R +VAAI R Q + + D E A + Sbjct: 152 YPNSPYAQDSQKRMVALKNRLANYDLATADFYLRREAWVAAINRSQELQKAFPDTEAARK 211 Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254 ++ +EAY L L D LI+ Sbjct: 212 SLTIQLEAYKQLGLEDAVARTEKLIE 237 >gi|254230256|ref|ZP_04923647.1| hypothetical protein VEx25_0358 [Vibrio sp. Ex25] gi|262395164|ref|YP_003287018.1| putative component of the lipoprotein assembly complex [Vibrio sp. Ex25] gi|151937236|gb|EDN56103.1| hypothetical protein VEx25_0358 [Vibrio sp. Ex25] gi|262338758|gb|ACY52553.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio sp. Ex25] Length = 242 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 10/206 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A + L+ N+ A E +PF + + L + Y + Sbjct: 32 ELYADAQISLQSGNWLSAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIS 91 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168 ++ P + +D+V Y+ G+S+ R+ +D K ++++R Sbjct: 92 RFMRLNPTHEKMDWVLYMRGLSHMAQDRNFMHDLFSVDRSDRDPEPVKKAFDDFKKLLQR 151 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NSPY + ++ + +N+LA ++ +YL+R +VAAI R Q + + D E A + Sbjct: 152 YPNSPYAEDSQKRMVALKNRLANYDLATADFYLRREAWVAAINRSQELQKAFPDTEAARK 211 Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254 ++ +EAY L L D LI+ Sbjct: 212 SLTIQLEAYKQLGLEDAVARTEKLIE 237 >gi|119470040|ref|ZP_01612845.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain [Alteromonadales bacterium TW-7] gi|119446750|gb|EAW28023.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain [Alteromonadales bacterium TW-7] Length = 254 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/237 (23%), Positives = 110/237 (46%), Gaps = 12/237 (5%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 ++ K A I FS++V L S+ D R + +YE A L +++A Sbjct: 4 KIGKRAFAIVFSVSVLSLGACS--SAPDQEDIQRVPNRSAQALYEDAKETLDSGLYARAI 61 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E + +PF +++ + + Y +G +QA + + +I P K++DY+YY+ Sbjct: 62 ELLSAIDSRYPFGPFSKQVQMDLVYAHYQSGNTEQALATIDRFIRLNPNHKDLDYMYYMR 121 Query: 138 GMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+ + ++ D T++ +S +V+R+ S Y A+ + N Sbjct: 122 GLVNIKADKNAFQEYFGIDRADRDANRTRVAFTDLSTLVKRFPQSGYAPEAKRRLVWLLN 181 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 ++A E+++ YY +R Y+AA R + V+ +YS + + A+ + ++Y L L + Sbjct: 182 RMARYELKVATYYYEREAYLAAANRGKFVVEHYSQSSYLNAALDMMQKSYEKLGLTE 238 >gi|134295825|ref|YP_001119560.1| competence lipoprotein ComL [Burkholderia vietnamiensis G4] gi|134138982|gb|ABO54725.1| competence lipoprotein ComL [Burkholderia vietnamiensis G4] Length = 274 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 14/214 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 43 NNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFAQQAQINVAYCNWKDNEAAAADQA 102 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ ++ Y YYL GM + Q + + D +A + Sbjct: 103 VDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 160 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY S Y A + N LA+ EV YY +RG YVAAI R QL + +Y A Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAP 220 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 E+A+ +V +Y L A + ++ +P Sbjct: 221 AIEDALHIMVLSYGKLNQPQLAEDTKRVLAGTFP 254 >gi|167581725|ref|ZP_02374599.1| competence lipoprotein ComL [Burkholderia thailandensis TXDOH] gi|167619841|ref|ZP_02388472.1| competence lipoprotein ComL [Burkholderia thailandensis Bt4] gi|257138983|ref|ZP_05587245.1| competence lipoprotein ComL [Burkholderia thailandensis E264] Length = 274 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 43 NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 102 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ +V Y YYL GM + Q + + D +A + Sbjct: 103 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 160 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY S Y A + N LA+ EV YY +RG YVAAI R QL + Y +A Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 220 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ ++ +Y L L D+ + V++ Sbjct: 221 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 250 >gi|134277813|ref|ZP_01764528.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 305] gi|226197143|ref|ZP_03792720.1| putative competence lipoprotein ComL [Burkholderia pseudomallei Pakistan 9] gi|237812528|ref|YP_002896979.1| competence lipoprotein ComL [Burkholderia pseudomallei MSHR346] gi|254197470|ref|ZP_04903892.1| putative competence lipoprotein ComL [Burkholderia pseudomallei S13] gi|254259639|ref|ZP_04950693.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 1710a] gi|134251463|gb|EBA51542.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 305] gi|169654211|gb|EDS86904.1| putative competence lipoprotein ComL [Burkholderia pseudomallei S13] gi|225930522|gb|EEH26532.1| putative competence lipoprotein ComL [Burkholderia pseudomallei Pakistan 9] gi|237504631|gb|ACQ96949.1| competence lipoprotein ComL [Burkholderia pseudomallei MSHR346] gi|254218328|gb|EET07712.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 1710a] Length = 280 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 49 NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 108 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ +V Y YYL GM + Q + + D +A + Sbjct: 109 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 166 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY S Y A + N LA+ EV YY +RG YVAAI R QL + Y +A Sbjct: 167 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 226 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ ++ +Y L L D+ + V++ Sbjct: 227 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 256 >gi|53719165|ref|YP_108151.1| putative lipoprotein [Burkholderia pseudomallei K96243] gi|167815477|ref|ZP_02447157.1| putative lipoprotein [Burkholderia pseudomallei 91] gi|167910660|ref|ZP_02497751.1| putative lipoprotein [Burkholderia pseudomallei 112] gi|52209579|emb|CAH35532.1| putative lipoprotein [Burkholderia pseudomallei K96243] Length = 274 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 43 NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 102 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ +V Y YYL GM + Q + + D +A + Sbjct: 103 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFRA 160 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY S Y A + N LA+ EV YY +RG YVAAI R QL + Y +A Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 220 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ ++ +Y L L D+ + V++ Sbjct: 221 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 250 >gi|292487318|ref|YP_003530190.1| hypothetical protein EAMY_0832 [Erwinia amylovora CFBP1430] gi|292900316|ref|YP_003539685.1| lipoprotein [Erwinia amylovora ATCC 49946] gi|291200164|emb|CBJ47290.1| putative lipoprotein [Erwinia amylovora ATCC 49946] gi|291552737|emb|CBA19782.1| UPF0169 lipoprotein PD_1756 precursor [Erwinia amylovora CFBP1430] Length = 243 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 15/222 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SRD DS E+Y A L++ NF A +PF +++ L Sbjct: 22 GSRDGVPDSPPS-----EIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQLDLI 76 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151 + Y A + + ++ P N+DYV Y+ G++ + I D Sbjct: 77 YAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRSDRD 136 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + S+++ Y NS Y AR + + +LA E+ + +Y KRG YVA + Sbjct: 137 PTHARDAFKDFSQLLRGYPNSQYATDARKRLVFLKERLAKHELSVTEFYTKRGAYVAVVN 196 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 R + +L +Y D +A+ + AY L L +A V +I Sbjct: 197 RVEQMLKDYPDTRATRKALPLMENAYRQLQLNAQAERVAKII 238 >gi|115351783|ref|YP_773622.1| competence lipoprotein ComL [Burkholderia ambifaria AMMD] gi|170703043|ref|ZP_02893870.1| competence lipoprotein ComL [Burkholderia ambifaria IOP40-10] gi|171320447|ref|ZP_02909480.1| competence lipoprotein ComL [Burkholderia ambifaria MEX-5] gi|172060754|ref|YP_001808406.1| competence lipoprotein ComL [Burkholderia ambifaria MC40-6] gi|115281771|gb|ABI87288.1| competence lipoprotein ComL [Burkholderia ambifaria AMMD] gi|170132051|gb|EDT00552.1| competence lipoprotein ComL [Burkholderia ambifaria IOP40-10] gi|171094307|gb|EDT39381.1| competence lipoprotein ComL [Burkholderia ambifaria MEX-5] gi|171993271|gb|ACB64190.1| competence lipoprotein ComL [Burkholderia ambifaria MC40-6] Length = 274 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 14/214 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 43 NNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFAQQAQINVAYCNWKDNEAAAADQA 102 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ ++ Y YYL GM + Q + + D +A + Sbjct: 103 VDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 160 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY S Y A + N LA+ EV YY +RG YVAAI R QL + +Y A Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAP 220 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 E+A+ ++ +Y L A + ++ +P Sbjct: 221 AIEDALHIMILSYGKLNQPQLAEDTKRVLAGTFP 254 >gi|325528652|gb|EGD05738.1| competence lipoprotein ComL [Burkholderia sp. TJI49] Length = 274 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 14/215 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 43 NNKLYSEAQDALSGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 102 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ ++ Y YYL GM + Q + + D +A + Sbjct: 103 VDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 160 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY S Y A + N LA+ EV YY +RG YVAAI R QL + +Y A Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAP 220 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 E+A+ ++ +Y L A + ++ +P Sbjct: 221 AIEDALHIMILSYGKLNQPQLAEDTKRVLAGTFPD 255 >gi|254291984|ref|ZP_04962764.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|150422123|gb|EDN14090.1| conserved hypothetical protein [Vibrio cholerae AM-19226] Length = 253 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 11/216 (5%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D V DV ++Y +A L+ + A E +PF + + L + Y Sbjct: 35 DVVPDVP-PSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKND 93 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLM 158 + E + P + +D+V Y+ G+++ R+ +D K Sbjct: 94 DLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAA 153 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++++RY NSPY + A+ + +N+LA ++ +YL+R ++AAI R Q + Sbjct: 154 FSDFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQK 213 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 Y D E A +++ +EAY L L D L+Q Sbjct: 214 TYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQ 249 >gi|126454430|ref|YP_001066470.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 1106a] gi|167719291|ref|ZP_02402527.1| competence lipoprotein ComL [Burkholderia pseudomallei DM98] gi|167738291|ref|ZP_02411065.1| competence lipoprotein ComL [Burkholderia pseudomallei 14] gi|167823888|ref|ZP_02455359.1| competence lipoprotein ComL [Burkholderia pseudomallei 9] gi|167845427|ref|ZP_02470935.1| competence lipoprotein ComL [Burkholderia pseudomallei B7210] gi|167893969|ref|ZP_02481371.1| competence lipoprotein ComL [Burkholderia pseudomallei 7894] gi|167902419|ref|ZP_02489624.1| competence lipoprotein ComL [Burkholderia pseudomallei NCTC 13177] gi|167918688|ref|ZP_02505779.1| competence lipoprotein ComL [Burkholderia pseudomallei BCC215] gi|217421678|ref|ZP_03453182.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 576] gi|242317204|ref|ZP_04816220.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 1106b] gi|254297449|ref|ZP_04964902.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 406e] gi|126228072|gb|ABN91612.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 1106a] gi|157807603|gb|EDO84773.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 406e] gi|217395420|gb|EEC35438.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 576] gi|242140443|gb|EES26845.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 1106b] Length = 274 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 43 NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 102 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ +V Y YYL GM + Q + + D +A + Sbjct: 103 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 160 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY S Y A + N LA+ EV YY +RG YVAAI R QL + Y +A Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 220 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ ++ +Y L L D+ + V++ Sbjct: 221 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 250 >gi|238756472|ref|ZP_04617779.1| hypothetical protein yruck0001_32310 [Yersinia ruckeri ATCC 29473] gi|238705321|gb|EEP97731.1| hypothetical protein yruck0001_32310 [Yersinia ruckeri ATCC 29473] Length = 243 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/237 (23%), Positives = 103/237 (43%), Gaps = 15/237 (6%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 + A LV S++DV D+ E+Y A L++ NF A Sbjct: 7 LVAAATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNR 61 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-- 144 +PF +++ L + Y + A + + ++ P N+DYV Y+ G++ + Sbjct: 62 YPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDD 121 Query: 145 --------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 I D + K + +++++ + NS Y A+ + +N+LA E+ + Sbjct: 122 SALQGFFGIDRSDRDPQHAKAAFRDFNQLIQSHPNSQYATDAQKRLVYLKNRLAKHELAV 181 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 YY KRG YVA I R + ++ +Y + +A+ + AY + L +A +V +I Sbjct: 182 AEYYTKRGAYVAVINRVEQMMRDYPGTQATRDALPLMENAYKQIQLNAQADKVNKVI 238 >gi|188534768|ref|YP_001908565.1| outer membrane protein assembly complex subunit YfiO [Erwinia tasmaniensis Et1/99] gi|188029810|emb|CAO97691.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99] Length = 243 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 15/222 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 S+DV DS E+Y A L++ NF A +PF +++ L Sbjct: 22 GSKDVVPDSPP-----SEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQLDLI 76 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151 + Y A + + ++ P N+DYV Y+ G++ + I D Sbjct: 77 YAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRSDRD 136 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + S+++ Y NS Y A + +++LA E+ + +Y KRG YVA + Sbjct: 137 PTHARDAFKDFSQLLRGYPNSQYATDAHKRLVFLKDRLAKYELSVVEFYTKRGAYVAVVN 196 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 R + +L +Y D + +A+ + AY L L +A V +I Sbjct: 197 RVEQMLKDYPDTQATHKALPLMENAYRQLQLNSQAERVAKII 238 >gi|255743835|ref|ZP_05417791.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio cholera CIRS 101] gi|262156054|ref|ZP_06029173.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio cholerae INDRE 91/1] gi|262191806|ref|ZP_06049977.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio cholerae CT 5369-93] gi|18203202|sp|Q9KU21|Y708_VIBCH RecName: Full=UPF0169 lipoprotein VC_0708; Flags: Precursor gi|255738466|gb|EET93855.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio cholera CIRS 101] gi|262030090|gb|EEY48735.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio cholerae INDRE 91/1] gi|262032293|gb|EEY50860.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio cholerae CT 5369-93] gi|327483505|gb|AEA77912.1| Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Vibrio cholerae LMA3894-4] Length = 241 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 11/216 (5%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D V DV ++Y +A L+ + A E +PF + + L + Y Sbjct: 23 DVVPDVP-PSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKND 81 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLM 158 + E + P + +D+V Y+ G+++ R+ +D K Sbjct: 82 DLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAA 141 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++++RY NSPY + A+ + +N+LA ++ +YL+R ++AAI R Q + Sbjct: 142 FADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQK 201 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 Y D E A +++ +EAY L L D L+Q Sbjct: 202 TYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQ 237 >gi|332535271|ref|ZP_08411073.1| putative component of the lipoprotein assembly complex [Pseudoalteromonas haloplanktis ANT/505] gi|332035302|gb|EGI71806.1| putative component of the lipoprotein assembly complex [Pseudoalteromonas haloplanktis ANT/505] Length = 254 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/237 (22%), Positives = 110/237 (46%), Gaps = 12/237 (5%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 ++ K A I FS++V L S+ D + +YE A L +++A Sbjct: 4 KIGKRAFAIVFSVSVLSLGAC--SSAPDQEDIQRVPNKSAHALYEDAKETLDSGLYARAI 61 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E + +PF +++ + + Y +G +QA + + +I P K++DY+YY+ Sbjct: 62 ELLSAIDSRYPFGPFSKQVQMDLVYAHYQSGNTEQALATIDRFIRLNPNHKDLDYMYYMR 121 Query: 138 GMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+ + ++ D T++ +S +V+R+ S Y A+ + N Sbjct: 122 GLVNIKADKNAFQEYFGVDRADRDANRTRVAFTDLSTLVKRFPKSDYAPEAKRRLVWLLN 181 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 ++A E+++ YY +R Y+AA R + V+ +YS + + + A+ + ++Y L L + Sbjct: 182 RMARYELKVATYYYEREAYLAAANRGKFVVEHYSQSSYLDPALEMMEKSYDQLGLTE 238 >gi|107029026|ref|YP_626121.1| DNA uptake lipoprotein-like [Burkholderia cenocepacia AU 1054] gi|116689815|ref|YP_835438.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia HI2424] gi|170733154|ref|YP_001765101.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia MC0-3] gi|105898190|gb|ABF81148.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia AU 1054] gi|116647904|gb|ABK08545.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia HI2424] gi|169816396|gb|ACA90979.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia MC0-3] Length = 274 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 14/215 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 43 NNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFAQQAQINVAYCNWKDNEAAAADQA 102 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ ++ Y YYL GM + Q + + D +A + Sbjct: 103 VDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPQALRESYDAFKV 160 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+R+ S Y A + N LA+ EV YY +RG YVAAI R QL + +Y A Sbjct: 161 VVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAP 220 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 E+A+ ++ +Y L + A + ++ +P Sbjct: 221 AIEDALHIMILSYGKLNQPELAEDTKRVLAGTFPD 255 >gi|259909397|ref|YP_002649753.1| outer membrane protein assembly complex subunit YfiO [Erwinia pyrifoliae Ep1/96] gi|224965019|emb|CAX56549.1| Outer membrane assembly lipoprotein YfiO [Erwinia pyrifoliae Ep1/96] gi|283479470|emb|CAY75386.1| UPF0169 lipoprotein PD_1756 precursor [Erwinia pyrifoliae DSM 12163] Length = 243 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 15/222 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SRDV DS E+Y A L++ NF+ A +PF +++ L Sbjct: 22 GSRDVVPDSPP-----SEIYATAQQKLQDGNFNGAITQLEALDNRYPFGPYSQQVQLDLI 76 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151 + Y A + + ++ P N+DYV Y+ G++ + I D Sbjct: 77 YAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRSDRD 136 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + S+++ Y NS Y AR + +++LA E+ + +Y KR YVA + Sbjct: 137 PTHARDAFKDFSQLLRGYPNSQYATDARKRLVFLKDRLAKYELSVAEFYTKRAAYVAVVN 196 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 R + +L +Y D +A+ + AY L L +A V +I Sbjct: 197 RVEQMLKDYPDTLATRKALPLMENAYRKLQLNAQAERVAKII 238 >gi|260771764|ref|ZP_05880682.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio metschnikovii CIP 69.14] gi|260613056|gb|EEX38257.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio metschnikovii CIP 69.14] Length = 242 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 10/206 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L+ N+ A + +PF + + L + Y + E Sbjct: 32 ELYSDAQTSLQSGNWLTAIDKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIE 91 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168 +I P + +D+V Y+ G+++ R+ +D K R++ER Sbjct: 92 RFIRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRSDRDPEPVKAAFADFKRLLER 151 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A+ + +N+LA ++ +YL+R ++AAI R Q + Y E A + Sbjct: 152 YPNSLYANDAQQRMIALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPGTEAARK 211 Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254 +++ ++AY L L D A L+Q Sbjct: 212 SLSIQLKAYQQLGLTDAAERTKQLMQ 237 >gi|206560229|ref|YP_002230993.1| putative lipoprotein [Burkholderia cenocepacia J2315] gi|198036270|emb|CAR52166.1| putative lipoprotein [Burkholderia cenocepacia J2315] Length = 274 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 14/215 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 43 NNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFAQQAQINVAYCNWKDNEPAAADQA 102 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ ++ Y YYL GM + Q + + D +A + Sbjct: 103 VDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPQALRESYDAFKV 160 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+R+ S Y A + N LA+ EV YY +RG YVAAI R QL + +Y A Sbjct: 161 VVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAP 220 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 E+A+ ++ +Y L + A + ++ +P Sbjct: 221 AIEDALHIMILSYGKLNQPELAEDTKRVLAGTFPD 255 >gi|76811535|ref|YP_333729.1| competence lipoprotein ComL [Burkholderia pseudomallei 1710b] gi|76580988|gb|ABA50463.1| competence lipoprotein ComL [Burkholderia pseudomallei 1710b] Length = 313 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 82 NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 141 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ +V Y YYL GM + Q + + D +A + Sbjct: 142 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 199 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY S Y A + N LA+ EV YY +RG YVAAI R QL + Y +A Sbjct: 200 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 259 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ ++ +Y L L D+ + V++ Sbjct: 260 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 289 >gi|83719596|ref|YP_442773.1| competence lipoprotein ComL [Burkholderia thailandensis E264] gi|83653421|gb|ABC37484.1| competence lipoprotein ComL [Burkholderia thailandensis E264] Length = 313 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 82 NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNETAAADQA 141 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ +V Y YYL GM + Q + + D +A + Sbjct: 142 VDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 199 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY S Y A + N LA+ EV YY +RG YVAAI R QL + Y +A Sbjct: 200 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 259 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ ++ +Y L L D+ + V++ Sbjct: 260 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 289 >gi|15640727|ref|NP_230357.1| hypothetical protein VC0708 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587776|ref|ZP_01677536.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|153801890|ref|ZP_01956476.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|153818714|ref|ZP_01971381.1| lipoprotein, putative [Vibrio cholerae NCTC 8457] gi|153822751|ref|ZP_01975418.1| lipoprotein, putative [Vibrio cholerae B33] gi|153826781|ref|ZP_01979448.1| lipoprotein, putative [Vibrio cholerae MZO-2] gi|153829373|ref|ZP_01982040.1| putative lipoprotein [Vibrio cholerae 623-39] gi|227080888|ref|YP_002809439.1| hypothetical protein VCM66_0666 [Vibrio cholerae M66-2] gi|229505674|ref|ZP_04395184.1| hypothetical protein VCF_000885 [Vibrio cholerae BX 330286] gi|229508753|ref|ZP_04398246.1| hypothetical protein VCE_000158 [Vibrio cholerae B33] gi|229512404|ref|ZP_04401878.1| hypothetical protein VCB_000044 [Vibrio cholerae TMA 21] gi|229519497|ref|ZP_04408940.1| hypothetical protein VCC_003527 [Vibrio cholerae RC9] gi|229519978|ref|ZP_04409408.1| hypothetical protein VIF_000494 [Vibrio cholerae TM 11079-80] gi|229530512|ref|ZP_04419900.1| hypothetical protein VCG_003632 [Vibrio cholerae 12129(1)] gi|229608692|ref|YP_002879340.1| hypothetical protein VCD_003614 [Vibrio cholerae MJ-1236] gi|254851038|ref|ZP_05240388.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|297580829|ref|ZP_06942755.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|298500819|ref|ZP_07010622.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9655150|gb|AAF93873.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548003|gb|EAX58083.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|124122601|gb|EAY41344.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|126510736|gb|EAZ73330.1| lipoprotein, putative [Vibrio cholerae NCTC 8457] gi|126519734|gb|EAZ76957.1| lipoprotein, putative [Vibrio cholerae B33] gi|148875156|gb|EDL73291.1| putative lipoprotein [Vibrio cholerae 623-39] gi|149739432|gb|EDM53672.1| lipoprotein, putative [Vibrio cholerae MZO-2] gi|227008776|gb|ACP04988.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|229332285|gb|EEN97773.1| hypothetical protein VCG_003632 [Vibrio cholerae 12129(1)] gi|229343030|gb|EEO08018.1| hypothetical protein VIF_000494 [Vibrio cholerae TM 11079-80] gi|229344186|gb|EEO09161.1| hypothetical protein VCC_003527 [Vibrio cholerae RC9] gi|229350554|gb|EEO15500.1| hypothetical protein VCB_000044 [Vibrio cholerae TMA 21] gi|229354277|gb|EEO19207.1| hypothetical protein VCE_000158 [Vibrio cholerae B33] gi|229357897|gb|EEO22814.1| hypothetical protein VCF_000885 [Vibrio cholerae BX 330286] gi|229371347|gb|ACQ61770.1| hypothetical protein VCD_003614 [Vibrio cholerae MJ-1236] gi|254846743|gb|EET25157.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|297535245|gb|EFH74080.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297540600|gb|EFH76658.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 253 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 11/216 (5%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D V DV ++Y +A L+ + A E +PF + + L + Y Sbjct: 35 DVVPDVP-PSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKND 93 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLM 158 + E + P + +D+V Y+ G+++ R+ +D K Sbjct: 94 DLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAA 153 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++++RY NSPY + A+ + +N+LA ++ +YL+R ++AAI R Q + Sbjct: 154 FADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQK 213 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 Y D E A +++ +EAY L L D L+Q Sbjct: 214 TYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQ 249 >gi|47779343|gb|AAT38572.1| predicted secreted lipoprotein [uncultured gamma proteobacterium eBACHOT4E07] Length = 272 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 58/243 (23%), Positives = 101/243 (41%), Gaps = 26/243 (10%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 F L + IA C G E + +Y Y++A + N+ A E Sbjct: 13 FGLFLTLIIAGCKSDGEEIEQPEKIY-------------YDQAQARMSSGNYFGAIESLE 59 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 +PF A ++ + + + + + A S E++I +P N+DY Y++ G+S Sbjct: 60 AIDTRYPFGKYAEQAQIELIYAHFMNTETEAAHSAAEKFIRLHPRHPNIDYAYFMKGLSS 119 Query: 142 AQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 RD+ D K ++ + R+ +S YV A+ RN +A Sbjct: 120 YTRDRDLLIRFTDTDISNRDVSGAKASFAELTEFITRFPDSQYVSYAKQRNIYLRNLIAK 179 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEARE 248 E+ YYL ++ AI R V+ N ++ A+ L E+Y AL L+++ R+ Sbjct: 180 SELSAADYYLTIDAHIGAIRRANYVIENIPNSSENYRALKILEESYEALGYTELLEDIRQ 239 Query: 249 VVS 251 V+S Sbjct: 240 VLS 242 >gi|254252276|ref|ZP_04945594.1| competence lipoprotein ComL [Burkholderia dolosa AUO158] gi|124894885|gb|EAY68765.1| competence lipoprotein ComL [Burkholderia dolosa AUO158] Length = 309 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 14/215 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 78 NNKLYSEAQDALSGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNEIAAADQA 137 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ ++ Y YYL GM + Q + + D +A + Sbjct: 138 VDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPQALRESYDAFKV 195 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY S Y A + N LA+ EV YY +RG YVAAI R QL + +Y A Sbjct: 196 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAP 255 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 E+A+ +V +Y L A + ++ +P Sbjct: 256 AIEDALHIMVLSYGKLNQPQLAEDTKRVLAGTFPD 290 >gi|332970081|gb|EGK09078.1| competence lipoprotein ComL [Kingella kingae ATCC 23330] Length = 268 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 19/255 (7%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA-- 76 + KF L I + A+ S+D L T ++Y +A L + N+++A Sbjct: 1 MKKFLLVISVAAALSACASNASTVSKDAQL---TQNWSNDQLYSEARQELNDGNYTRATA 57 Query: 77 -YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 YE D + +SL+ SA+ + + +A + YP S ++DY Y Sbjct: 58 LYELLRARQADGRYT---EQSLIESAYAHFKNEEPAKALQNLARFEQNYPASVDMDYALY 114 Query: 136 LVGM-------SYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 L G+ S+ + + + D A + + ++V RY NS Y + AR + Sbjct: 115 LKGLVLFAEDQSFLRRLASQDWSDRDPEANRRAFRVFEQLVNRYPNSKYAEDARKRMAQL 174 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 + L E+ I RYY KR Y+AA R Q +L + + + EEA+A +V Y + D Sbjct: 175 VDALGGHEIAIARYYAKRTAYLAANNRAQRILEQFQNTRYVEEALAIMVYTYEQMGNADM 234 Query: 246 AREVVSLIQERYPQG 260 A ++ + P Sbjct: 235 AEATRRVLAQNLPNS 249 >gi|108757392|ref|YP_630233.1| putative competence lipoprotein ComL [Myxococcus xanthus DK 1622] gi|108461272|gb|ABF86457.1| putative competence lipoprotein ComL [Myxococcus xanthus DK 1622] Length = 261 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 14/202 (6%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 L+ ++F +A +YF FP+ AR++ L A V + + +A + +I +P Sbjct: 49 LENKDFFRAQKYFEYVRTKFPYQEAAREAELKLADVDFEREAFPEAKEQYQSFIKLHPTH 108 Query: 128 KNVDYVYYLVGMSYAQMIRDVP-----------YDQRATKLMLQYMSRIVERYTNSPYVK 176 VDY + M++ +R P DQ + L M + +Y S YV Sbjct: 109 AKVDYAAFRSAMTH---VRAYPSEFFALPPSREKDQGEIRSALVAMEEFLRQYPQSQYVA 165 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 A+ R +LA+ E+ ++Y KR + A R + +L Y E+ EEA+ L +A Sbjct: 166 EAKTQREDARRRLASHELYAAQFYQKRERWKAVAQRLEGLLRRYPGTEYEEEALFDLHDA 225 Query: 237 YVALALMDEAREVVSLIQERYP 258 YV L ++A++ + + R P Sbjct: 226 YVKLNDTEKAQDTLRQVLRRLP 247 >gi|218885504|ref|YP_002434825.1| lipoprotein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756458|gb|ACL07357.1| putative lipoprotein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 246 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 8/177 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +E++E ++E+ + +A E F++ FPF+ ++ L A + Y A Sbjct: 40 QELFEAGNDSMREKRYGEAAESFSKLKEQFPFSPYTIEAELSLADAHFLDEDYLLAGEAY 99 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM--LQYMSRIVERYTNSPYV 175 +E+ T +P + + YV Y VG S + + D+ T L +QY R+ E Y + Y Sbjct: 100 KEFETLHPRHEAIPYVLYQVGQSRQKAFLSI--DRPTTGLTEAIQYYQRLRESYPGTEYA 157 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE----HAEE 228 + A+ ++T R LA +E+ IG ++ + Y AA R+ V+ N+ + E HAEE Sbjct: 158 EKAKQHITECRRLLAERELYIGDFFWRAERYGAAWRRYVYVVENFPEIEDLRSHAEE 214 >gi|298531012|ref|ZP_07018413.1| outer membrane assembly lipoprotein YfiO [Desulfonatronospira thiodismutans ASO3-1] gi|298509035|gb|EFI32940.1| outer membrane assembly lipoprotein YfiO [Desulfonatronospira thiodismutans ASO3-1] Length = 243 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/213 (23%), Positives = 100/213 (46%), Gaps = 7/213 (3%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +E+ + V ++++ ++KA EYF+ FPF+ + + +G Y A ++ Sbjct: 37 QELAQAGVDAMEQERYNKAIEYFSDLRDRFPFSPHTPTAEVALGDAYMKSGNYDAAITVF 96 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E+ P + + YV + G+++ + QR + L+Y R+ + Y + Y + Sbjct: 97 TEFAEMNPRHEYMPYVLFRTGLAHFNKFTSIDRPQRNMQEALEYFRRVAQVYPETEYAEY 156 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEA 236 +R+Y R ++A E+ I +Y + Y +A R++ V+ N+ D E+ E A R + Sbjct: 157 SRYYKVQCRKKIAEHELYIADFYWRTKRYGSAYERYRYVMDNFEDLPEYVEYAGERAKRS 216 Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETL 269 Y + +E VS + +G W +++ L Sbjct: 217 YY------KHQEHVSSHKRATEEGSWRDWLDWL 243 >gi|254248089|ref|ZP_04941410.1| Competence lipoprotein ComL [Burkholderia cenocepacia PC184] gi|124872865|gb|EAY64581.1| Competence lipoprotein ComL [Burkholderia cenocepacia PC184] Length = 309 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 14/215 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 78 NNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFAQQAQINVAYCNWKDNEAAAADQA 137 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ ++ Y YYL GM + Q + + D +A + Sbjct: 138 VDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPQALRESYDAFKV 195 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+R+ S Y A + N LA+ EV YY +RG YVAAI R QL + +Y A Sbjct: 196 VVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAP 255 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 E+A+ ++ +Y L + A + ++ +P Sbjct: 256 AIEDALHIMILSYGKLNQPELAEDTKRVLAGTFPD 290 >gi|300722271|ref|YP_003711555.1| putative lipoprotein [Xenorhabdus nematophila ATCC 19061] gi|297628772|emb|CBJ89350.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain [Xenorhabdus nematophila ATCC 19061] Length = 243 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 13/216 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D+V D+ ++Y L+E N+ A + +PF +++ L + Y + Sbjct: 25 DAVPDIP-PSQIYSIGQEKLQEGNYKAAIKQLESLDNRYPFGPYSQQVQLDLIYAYYKSA 83 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-----------DQRATKL 157 ++ A + + +I P N+DYV+Y+ G+ +Q + D D + Sbjct: 84 EFPLAIASIDRFIRLNPTHPNIDYVWYMRGL-VSQALDDSALQEFFGIDRSDRDPEHARA 142 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + + ++ Y +S Y A + + +LA E+ + YY KR YVA + R + +L Sbjct: 143 AFRDFNHLIHDYPSSQYSADAIKRLAFLKERLARYELAVVEYYTKRSAYVAVVNRVEQML 202 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +Y D EA++ + AY L L+ EA +V LI Sbjct: 203 RDYPDTHATREALSYMESAYKELGLIAEADKVAKLI 238 >gi|24375081|ref|NP_719124.1| hypothetical protein SO_3580 [Shewanella oneidensis MR-1] gi|24349840|gb|AAN56568.1|AE015795_2 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 268 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 10/212 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y +A ++ N+SKA FPF + L + Y + + Sbjct: 52 ELYSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANID 111 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P N+DYVYY+ G+ Q I D + + + R+++ Sbjct: 112 RFIRLNPTHPNIDYVYYMRGLVNMQADSYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKT 171 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A+ + +N+LA +++ YY+K + AA R Q VL Y E Sbjct: 172 YPNSKYAADAQKRMLSLKNRLAKYSIQVAEYYIKMNAWSAAAVRAQSVLETYPGTPSTER 231 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 A+ + EAY L + V+ ++Q +P Sbjct: 232 ALEIMAEAYGELGQNQLKQNVLMVMQANFPNN 263 >gi|77359879|ref|YP_339454.1| TPR repeat-containing lipoprotein [Pseudoalteromonas haloplanktis TAC125] gi|76874790|emb|CAI86011.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain [Pseudoalteromonas haloplanktis TAC125] Length = 254 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/235 (22%), Positives = 108/235 (45%), Gaps = 12/235 (5%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 ++ K A I FS++V L S+ D + +YE A L +++A Sbjct: 4 KIGKRAFAIVFSVSVLSLGAC--SSAPDQEDIQRVPNKSAHALYEDAKQTLDSGLYARAI 61 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E + +PF +++ + + Y +G +QA + + +I P K++DY+YY+ Sbjct: 62 ELLSAIDSRYPFGPFSKQVQMDLVYAHYQSGNTEQALATIDRFIRLNPNHKDLDYMYYMR 121 Query: 138 GMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+ + ++ D T++ +S +V+R+ S Y A+ + N Sbjct: 122 GLVNIKADKNAFQEYFGVDRADRDANRTRVAFTDLSTLVKRFPQSDYAPEAKRRLVWLLN 181 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 ++A E+++ YY +R Y+AA R + V+ +YS + + A+ + ++Y L L Sbjct: 182 RMARYELKVATYYYEREAYLAAANRGKFVVEHYSQSSYLNSALEMMEKSYDKLGL 236 >gi|261212186|ref|ZP_05926472.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio sp. RC341] gi|260838794|gb|EEX65445.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio sp. RC341] Length = 241 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 11/210 (5%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y +A L+ + A E +PF + + L + Y + E Sbjct: 32 ELYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIE 91 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168 + P + +D+V Y+ G+++ R+ +D K ++++R Sbjct: 92 RFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNVDRFDRDPEPVKAAFADFKKLLQR 151 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NSPY + A+ + +N+LA ++ +YL+R ++AAI R Q + Y D E A + Sbjct: 152 YPNSPYAEDAQRRMYALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARK 211 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258 A+ +EAY L L EA E L+ + P Sbjct: 212 ALEIQLEAYQQLGLT-EAVERTKLLMQLNP 240 >gi|120599939|ref|YP_964513.1| putative lipoprotein [Shewanella sp. W3-18-1] gi|146292125|ref|YP_001182549.1| putative lipoprotein [Shewanella putrefaciens CN-32] gi|120560032|gb|ABM25959.1| putative lipoprotein [Shewanella sp. W3-18-1] gi|145563815|gb|ABP74750.1| putative lipoprotein [Shewanella putrefaciens CN-32] Length = 253 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 10/211 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A ++ N++KA FPF + L + Y + + Sbjct: 38 LYSQARTSMELGNYAKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDR 97 Query: 120 YITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERY 169 +I P N+DYVYY+ G+ Q I D + + + R+++ Y Sbjct: 98 FIRLNPTHPNIDYVYYMRGLVNMQADNYLFHDMLSIDRTDRDPKNAQDAFKDFDRLIKTY 157 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 NS Y A+ + +N+LA +++ YYLK + AA R Q VL Y E A Sbjct: 158 PNSKYAADAQKRMFSLKNRLAKYSIQVAEYYLKMNAWSAAAIRAQSVLETYPGTPSTERA 217 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 + ++EAY L + V+ ++Q YP Sbjct: 218 LEIMIEAYGELGQNQLKQNVLMVMQANYPNN 248 >gi|253689513|ref|YP_003018703.1| outer membrane assembly lipoprotein YfiO [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756091|gb|ACT14167.1| outer membrane assembly lipoprotein YfiO [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 244 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 15/222 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 +S+D DS E+Y A L++ NF A +PF +++ L Sbjct: 23 NSKDAVPDSPP-----SEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQVQLDLI 77 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151 + Y + + A + + ++ P NVDYV Y+ G++ + + D Sbjct: 78 YAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVDRSDRD 137 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + + S++++ Y NS Y A + + +LA E+ + +YY KR YVA + Sbjct: 138 PQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRSAYVAVVN 197 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 R + +L +Y D + + A+ + AY L L +A +V +I Sbjct: 198 RVEQMLRDYPDTQATKTALPLMENAYRELQLAAQADKVAKVI 239 >gi|161524653|ref|YP_001579665.1| competence lipoprotein ComL [Burkholderia multivorans ATCC 17616] gi|189350590|ref|YP_001946218.1| putative lipoprotein [Burkholderia multivorans ATCC 17616] gi|221198060|ref|ZP_03571106.1| putative competence lipoprotein ComL [Burkholderia multivorans CGD2M] gi|221204382|ref|ZP_03577399.1| putative competence lipoprotein ComL [Burkholderia multivorans CGD2] gi|221212789|ref|ZP_03585765.1| putative competence lipoprotein ComL [Burkholderia multivorans CGD1] gi|160342082|gb|ABX15168.1| competence lipoprotein ComL [Burkholderia multivorans ATCC 17616] gi|189334612|dbj|BAG43682.1| putative lipoprotein [Burkholderia multivorans ATCC 17616] gi|221167002|gb|EED99472.1| putative competence lipoprotein ComL [Burkholderia multivorans CGD1] gi|221175239|gb|EEE07669.1| putative competence lipoprotein ComL [Burkholderia multivorans CGD2] gi|221181992|gb|EEE14393.1| putative competence lipoprotein ComL [Burkholderia multivorans CGD2M] Length = 274 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 14/214 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 43 NNKLYSEAQDALSGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNEPAAADQA 102 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ ++ Y YYL GM + Q + + D +A + Sbjct: 103 VDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 160 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY S Y A + N LA+ EV YY +RG YVAAI R QL + +Y A Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAP 220 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 E+A+ +V +Y L A + ++ +P Sbjct: 221 AIEDALHIMVLSYQKLNQPQLAEDTKRVLAGTFP 254 >gi|293392745|ref|ZP_06637063.1| competence lipoprotein ComL [Serratia odorifera DSM 4582] gi|291424604|gb|EFE97815.1| competence lipoprotein ComL [Serratia odorifera DSM 4582] Length = 243 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 50/222 (22%), Positives = 99/222 (44%), Gaps = 15/222 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS+D D+ E+Y A L++ NF A +PF +++ L Sbjct: 22 SSKDAVPDNPP-----SEIYANAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQLDLI 76 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151 + Y + A + + ++ P N+DYV Y+ G++ + + D Sbjct: 77 YAYYKSADLPLAQASIDRFMRLNPTHPNIDYVMYMRGLTDMALDDSALQGFFGVDRSDRD 136 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + + S+++++Y +S Y A+ + +++L+ E+ + YY KRG YVA + Sbjct: 137 PQHARAAFRDFSQLIQQYPSSQYTPDAQKRLVYLKDRLSKYELSVAEYYTKRGAYVAVVN 196 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 R + ++ Y D + +A+ + AY L L +A +V +I Sbjct: 197 RVEQMMREYPDTKATRDALPLMENAYKQLQLNGQADKVAKII 238 >gi|319425421|gb|ADV53495.1| beta barrel protein translocation component, BamC [Shewanella putrefaciens 200] Length = 253 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 10/211 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A ++ N++KA FPF + L + Y + + Sbjct: 38 LYSQARTSMELGNYAKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDR 97 Query: 120 YITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERY 169 +I P N+DYVYY+ G+ Q I D + + + R+++ Y Sbjct: 98 FIRLNPTHPNIDYVYYMRGLVNMQADNYLFHDMLSIDRTDRDPKNAQDAFKDFDRLIKTY 157 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 NS Y A+ + +N+LA +++ YYLK + AA R Q VL Y E A Sbjct: 158 PNSKYAADAQKRMFSLKNRLAKYSIQVAEYYLKMNAWSAAAIRAQSVLETYPGTPSTERA 217 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 + ++EAY L + V+ ++Q YP Sbjct: 218 LEIMIEAYGELGQNQLKQNVLMVMQANYPNN 248 >gi|209694253|ref|YP_002262181.1| outer membrane protein [Aliivibrio salmonicida LFI1238] gi|208008204|emb|CAQ78348.1| outer membrane protein [Aliivibrio salmonicida LFI1238] Length = 255 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y +A + L+ N++ A E +PF + + L +V Y + E Sbjct: 46 ELYSQAQISLQAGNWTSAVERLEALDSRYPFGAYSEQVQLDLIYVYYKNDDLALGLATIE 105 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168 + P + D+V Y+ G+++ R +D + + R++ER Sbjct: 106 RFNRLNPTNPKADWVLYMRGLTHMAQDRSFMHDLFRVNRSDRDPEPARSAFKDFKRLLER 165 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y +S Y + A+ + +N+LA E+ +YL+R +++AI R Q + Y D E A + Sbjct: 166 YPDSLYAEDAQTRMFALKNRLADYELATADFYLRREAWISAINRSQELQRTYPDTEAARK 225 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 ++ ++ AY L L D + LI Sbjct: 226 SLTIMLSAYKELKLDDAIQRTEELI 250 >gi|167562572|ref|ZP_02355488.1| competence lipoprotein ComL [Burkholderia oklahomensis EO147] gi|167569755|ref|ZP_02362629.1| competence lipoprotein ComL [Burkholderia oklahomensis C6786] Length = 274 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 17/210 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 43 NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNEAAAADQA 102 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ ++ Y YYL GM + Q + + D +A + Sbjct: 103 IDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSER--DPQALRESYDAFKV 160 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY S Y A + N LA+ EV YY +RG YVAAI R QL + Y +A Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHSADYYYRRGAYVAAINRAQLAIKEYKNAP 220 Query: 225 HAEEAMARLVEAYVALA---LMDEAREVVS 251 E+A+ ++ +Y L L D+ + V++ Sbjct: 221 AIEDALHIMMLSYAKLNQPQLADDTKRVLA 250 >gi|78066564|ref|YP_369333.1| DNA uptake lipoprotein-like [Burkholderia sp. 383] gi|77967309|gb|ABB08689.1| DNA uptake lipoprotein-like protein [Burkholderia sp. 383] Length = 274 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 14/215 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 43 NNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFAQQAQINVAYCNWKDNEAAAADQA 102 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ ++ Y YYL GM + Q + + D +A + Sbjct: 103 VDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPQALRESYDAFKV 160 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+R+ S Y A + N LA+ EV YY +RG YVAAI R QL + +Y A Sbjct: 161 VVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAP 220 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 E+A+ ++ +Y L A + ++ +P Sbjct: 221 AIEDALHIMILSYGKLNQPQLAEDTKRVLAGTFPD 255 >gi|255020043|ref|ZP_05292116.1| Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Acidithiobacillus caldus ATCC 51756] gi|254970572|gb|EET28061.1| Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Acidithiobacillus caldus ATCC 51756] Length = 209 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 46/191 (24%), Positives = 86/191 (45%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 + ++ +A F ++P+ A ++ L +A+ Y G + A + + +I +P + Sbjct: 1 MDSGDYDRAIRDFQNLQAEYPYGPYAEQAQLDTAYAYYKQGDSKAAVAAADAFIKAHPVN 60 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 +VDY +YL G++ Q I +D R LQ + + Y S Y AR ++ + Sbjct: 61 PHVDYAWYLKGLAQYQAIEGAEFDPRPDYQALQTFRYVAKTYPKSAYALSARLHIAKIID 120 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 L + + I ++Y R +VAA R V+ +Y + A+ L +Y L L+ AR Sbjct: 121 ILGERNLRICKFYYVRHAFVAAANRCVRVIRDYQLSPARNMALYYLARSYRRLDLLGLAR 180 Query: 248 EVVSLIQERYP 258 ++ P Sbjct: 181 TTAIILHHNAP 191 >gi|120602370|ref|YP_966770.1| lipoprotein [Desulfovibrio vulgaris DP4] gi|120562599|gb|ABM28343.1| putative lipoprotein [Desulfovibrio vulgaris DP4] gi|311233769|gb|ADP86623.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio vulgaris RCH1] Length = 243 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 21/228 (9%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 M L RA C+ ALT F ++ C ++ + YL D +E+ Sbjct: 1 MRKTLLRAACMA----------ALT--FMLSGCGIIDY-------FYLPPPEDT--AQEL 39 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE ++E+++ A + + + ++PF+ ++ L A + +Y AA +E+ Sbjct: 40 YESGNDAMREKDYVAAAQAYTRLKDNYPFSPYTIEAELSLADAYFLDEEYPAAAEAYKEF 99 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 T +P + + YV Y VGM+ + V + QY R+ E Y + Y A Sbjct: 100 ETLHPRHQAIPYVLYQVGMARLKSFISVDRPVNNVQEAYQYFQRLRESYPGTEYAAKAEE 159 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 ++ R LA +E+ I Y + G+Y AA R+ V N+ D HA E Sbjct: 160 HMKECRRLLAERELFIADVYWRTGKYGAAWQRYSFVRDNFKDVPHAVE 207 >gi|158522066|ref|YP_001529936.1| DNA uptake lipoprotein-like protein [Desulfococcus oleovorans Hxd3] gi|158510892|gb|ABW67859.1| DNA uptake lipoprotein-like protein [Desulfococcus oleovorans Hxd3] Length = 255 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 86/188 (45%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +E+ ++ + + + K+ E F +PF+ + + L A ++ +Y+ A S Sbjct: 62 QELADEGTRYFDKGRYKKSIEAFENLRDWYPFSKLTTLADLKVADAYFNMEEYESAVSAY 121 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E + +P ++V +V + G+ + + + DQ + SR+V Y +S Y Sbjct: 122 ENFERLHPRHESVPFVIFRTGLCHFNRLDTIDRDQTPAHRAIDAFSRLVRAYPDSEYASQ 181 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A Y+ R LAA E+ + ++Y K Y +A+ RF+ ++ Y D E A + Sbjct: 182 ATDYIHQCRESLAAHELYVAKFYFKTKRYRSALYRFKQIIEKYPDVGDIETARRHIPLCE 241 Query: 238 VALALMDE 245 LA M++ Sbjct: 242 EGLAEMEK 249 >gi|46580246|ref|YP_011054.1| competence protein [Desulfovibrio vulgaris str. Hildenborough] gi|46449663|gb|AAS96313.1| competence protein, putative [Desulfovibrio vulgaris str. Hildenborough] Length = 260 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 21/228 (9%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 M L RA C+ ALT F ++ C ++ + YL D +E+ Sbjct: 18 MRKTLLRAACMA----------ALT--FMLSGCGIIDY-------FYLPPPEDT--AQEL 56 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE ++E+++ A + + + ++PF+ ++ L A + +Y AA +E+ Sbjct: 57 YESGNDAMREKDYVAAAQAYTRLKDNYPFSPYTIEAELSLADAYFLDEEYPAAAEAYKEF 116 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 T +P + + YV Y VGM+ + V + QY R+ E Y + Y A Sbjct: 117 ETLHPRHQAIPYVLYQVGMARLKSFISVDRPVNNVQEAYQYFQRLRESYPGTEYAAKAEE 176 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 ++ R LA +E+ I Y + G+Y AA R+ V N+ D HA E Sbjct: 177 HMKECRRLLAERELFIADVYWRTGKYGAAWQRYSFVRDNFKDVPHAVE 224 >gi|297170430|gb|ADI21462.1| DNA uptake lipoprotein [uncultured gamma proteobacterium HF0070_10G19] Length = 263 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 16/229 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +++ YE A + +N+ A + +PF A ++ + Y G + A S Sbjct: 35 EQQYYELAQRRMNAKNYFAAIQSLEMIETRYPFGRFAEQAQAELIYANYMMGDDEAAHSA 94 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY------------DQRATKLMLQYMSR 164 E++I +P N+DY Y++ G+ A RD + D K +S Sbjct: 95 AEKFIRLHPRHPNIDYAYFMRGL--ASYTRDNSFFARVFKNSLARRDISGAKQSFNELSE 152 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + R++ S Y A + RN +A E+ YY+KR Y+A++ R + V+ N ++ Sbjct: 153 FLTRFSQSQYAPYANQRLIFLRNIIAKHELAAAEYYVKREAYIASLRRAKYVIENIPNSS 212 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSL--IQERYPQGYWARYVETLVK 271 +A+ + ++Y+ L +D A EV I E Q Y+ + K Sbjct: 213 ENLKALEIMKKSYLELGYLDLAEEVEETMRINETAKQNISDNYLSEIPK 261 >gi|310766695|gb|ADP11645.1| outer membrane protein assembly complex subunit YfiO [Erwinia sp. Ejp617] Length = 243 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 15/222 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 +RDV DS E+Y A L++ NF+ A +PF +++ L Sbjct: 22 GARDVVPDSPP-----SEIYATAQQKLQDGNFNGAITQLEALDNRYPFGPYSQQVQLDLI 76 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151 + Y A + + ++ P N+DYV Y+ G++ + I D Sbjct: 77 YAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRSDRD 136 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + S+++ Y NS Y AR + +++LA E+ + +Y KR YVA + Sbjct: 137 PTHARDAFKDFSQLLRGYPNSQYATDARKRLVFLKDRLAKYELSVAEFYTKRAAYVAVVN 196 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 R + +L +Y D +A+ + AY L L +A V +I Sbjct: 197 RVEQMLKDYPDTLATRKALPLMENAYRKLQLNAQAERVAKII 238 >gi|270264066|ref|ZP_06192334.1| hypothetical protein SOD_f02840 [Serratia odorifera 4Rx13] gi|270042259|gb|EFA15355.1| hypothetical protein SOD_f02840 [Serratia odorifera 4Rx13] Length = 243 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 11/215 (5%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D+V D E+Y A L++ NF A +PF +++ L + Y + Sbjct: 25 DAVPD-NPPSEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQLDLIYAYYKSA 83 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158 A + + ++ P N+DYV Y+ G++ + + D + + Sbjct: 84 DLPLAQASIDRFMRLNPTHPNIDYVMYMRGLTDMALDDSALQGFFGVDRSDRDPQHARAA 143 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + S+++++Y S YV A + +++LA E+ + YY KRG YVA + R +L Sbjct: 144 FRDFSQLIQQYPTSQYVTDANKRLVYLKDRLAKYELSVVEYYTKRGAYVAVVNRADQMLR 203 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 Y D + +A+ + AY L L +A +V +I Sbjct: 204 EYPDTQATRDALPLMENAYKQLQLNGQADKVAKVI 238 >gi|153834661|ref|ZP_01987328.1| lipoprotein, ComL family [Vibrio harveyi HY01] gi|156973323|ref|YP_001444230.1| hypothetical protein VIBHAR_01004 [Vibrio harveyi ATCC BAA-1116] gi|148868913|gb|EDL67971.1| lipoprotein, ComL family [Vibrio harveyi HY01] gi|156524917|gb|ABU70003.1| hypothetical protein VIBHAR_01004 [Vibrio harveyi ATCC BAA-1116] Length = 242 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 10/206 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L+ N+ A E +PF + + L + Y + Sbjct: 32 ELYADAQTSLQSGNWLSAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIS 91 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168 ++ P + +D+V Y+ G+S+ R+ +D K +++ER Sbjct: 92 RFMRLNPTHEKMDWVLYMRGLSHMAQDRNFMHDLFNVDRSDRDPEPVKKAFDDFKKLLER 151 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NSPY + ++ + +N+LA ++ +YL+R ++AAI R Q + + D E A + Sbjct: 152 YPNSPYAEDSQKRMVALKNRLANYDLATADFYLRREAWIAAINRSQELQKAFPDTEAARK 211 Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254 ++ +EAY L L D LI+ Sbjct: 212 SLEIQLEAYKQLKLDDAVARTEELIK 237 >gi|213646597|ref|ZP_03376650.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 270 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVER 168 ++ P N+DYV Y+ G++ + V D + + S++V Sbjct: 94 RFMRLNPTHPNIDYVMYMRGLTNMALDDSVLQGFFGVDRSDRDPQHARAAFNDFSKLVRS 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA E + YY RG +VA + R + +L NY D + + Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + L +A +V +I Sbjct: 214 ALPLMENAYRQMQLNAQADKVAKII 238 >gi|167587071|ref|ZP_02379459.1| DNA uptake lipoprotein-like [Burkholderia ubonensis Bu] Length = 274 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 14/214 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L ++ K +YF PF A+++ + A+ + + A Sbjct: 43 NNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWKDNEPAAADQA 102 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 + +I +P+ ++ Y YYL GM + Q + + D +A + Sbjct: 103 VDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPQALRESYDAFKV 160 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+RY S Y A + N LA+ EV YY +RG YVAAI R QL + Y A Sbjct: 161 VVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKGAP 220 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 E+A+ ++ +Y L A + ++ +P Sbjct: 221 AIEDALHIMILSYDKLQQPQLAEDTKRVLAGTFP 254 >gi|194435121|ref|ZP_03067357.1| outer membrane assembly lipoprotein YfiO [Shigella dysenteriae 1012] gi|194416652|gb|EDX32785.1| outer membrane assembly lipoprotein YfiO [Shigella dysenteriae 1012] gi|332089242|gb|EGI94349.1| outer membrane assembly lipoprotein YfiO [Shigella dysenteriae 155-74] Length = 245 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P N+DYV Y+ G++ + + D + ++ S++V Sbjct: 94 RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARVAFSDFSKLVRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +N+LA E + YY +RG +VA + R + +L +Y D + + Sbjct: 154 YPNSQYTTDATKRLVFLKNRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + + +A +V +I Sbjct: 214 ALPLMENAYRQMQINAQAEKVAKII 238 >gi|319760322|ref|YP_004124260.1| putative lipoprotein [Candidatus Blochmannia vafer str. BVAF] gi|318039036|gb|ADV33586.1| putative lipoprotein [Candidatus Blochmannia vafer str. BVAF] Length = 261 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 47/222 (21%), Positives = 104/222 (46%), Gaps = 15/222 (6%) Query: 50 SVTDVRYQR--EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 S +++Q ++Y+ A L N++++ + + + PF ++ L + Y Sbjct: 39 SHHKIKHQNSSDLYKSAHDKLLHNNYTESIQKLLRLNNLHPFEPYPQQIYLDLIYAYYKL 98 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-------------DQRA 154 +Q A + + +++ YP KN+DYV Y+ G+ + ++ Y + Sbjct: 99 HDFQSANNFIQRFLSSYPNHKNLDYVLYMQGLINMNLDKNNSYFAHKYWHKSWFKHNPSY 158 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 + S+I++ + NS Y A + + +N++A E+ I ++Y +R Y++ I R + Sbjct: 159 ANIAFHSFSKIIQNHPNSQYYIDAYKRLIILKNRIANYELAIIKFYDQRNSYISVILRSE 218 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +L + + EA+ + AY ++L+D++ V +I E Sbjct: 219 RMLRYFPNTPATYEALYYMKRAYQKVSLLDQSNIVNKIISEN 260 >gi|312171424|emb|CBX79683.1| UPF0169 lipoprotein PD_1756 precursor [Erwinia amylovora ATCC BAA-2158] Length = 243 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 15/222 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SRD DS E+Y A L++ NF A +PF +++ L Sbjct: 22 GSRDGVPDSPPS-----EIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQLDLI 76 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYD 151 + Y A + + ++ P N+DYV Y+ G++ + I D Sbjct: 77 YAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRSDRD 136 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + S+++ Y NS Y AR + + +LA E+ + +Y RG YVA + Sbjct: 137 PTHARDAFKDFSQLLRGYPNSQYATDARKRLVFLKERLAKHELSVTEFYTNRGAYVAVVN 196 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 R + +L +Y D +A+ + AY L L +A V +I Sbjct: 197 RVEQMLKDYPDTRATRKALPLMENAYRQLQLNAQAERVAKII 238 >gi|117921610|ref|YP_870802.1| putative lipoprotein [Shewanella sp. ANA-3] gi|117613942|gb|ABK49396.1| putative lipoprotein [Shewanella sp. ANA-3] Length = 282 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 10/211 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A ++ N+SKA FPF + L + Y + + Sbjct: 67 LYSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDR 126 Query: 120 YITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERY 169 +I P N+DYVYY+ G+ Q I D + + + R+++ Y Sbjct: 127 FIRLNPTHPNIDYVYYMRGLVNMQADSYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTY 186 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 NS Y A+ + +N+LA +++ YY+K + AA R Q VL Y E A Sbjct: 187 PNSKYAADAQKRMLSLKNRLAKYSIQVAEYYIKMNAWSAAAVRAQSVLETYPGTPSTERA 246 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + EAY L + V+ ++Q +P Sbjct: 247 LEIMAEAYGELGQNQLKQNVLMVMQANFPNN 277 >gi|289824163|ref|ZP_06543758.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 269 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVER 168 ++ P N+DYV Y+ G++ + V D + + S++V Sbjct: 94 RFMRLNPTHPNIDYVMYMRGLTNMALDDSVLQGFFGVDRSDRDPQHARAAFNDFSKLVRS 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA E + YY RG +VA + R + +L NY D + + Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + L +A +V +I Sbjct: 214 ALPLMENAYRQMQLNAQADKVAKII 238 >gi|16761517|ref|NP_457134.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142988|ref|NP_806330.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213051816|ref|ZP_03344694.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213424874|ref|ZP_03357624.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213850145|ref|ZP_03381043.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25306749|pir||AD0832 probable lipoprotein STY2852 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503818|emb|CAD05843.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Typhi] gi|29138620|gb|AAO70190.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 245 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 10/206 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E+Y A L++ N+ +A +PF +++ L + Y A + Sbjct: 33 NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVE 167 + ++ P N+DYV Y+ G++ + V D + + S++V Sbjct: 93 DRFMRLNPTHPNIDYVMYMRGLTNMALDDSVLQGFFGVDRSDRDPQHARAAFNDFSKLVR 152 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y NS Y A + +++LA E + YY RG +VA + R + +L NY D + Sbjct: 153 SYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATR 212 Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253 +A+ + AY + L +A +V +I Sbjct: 213 DALPLMENAYRQMQLNAQADKVAKII 238 >gi|45644679|gb|AAS73067.1| predicted secreted lipoprotein ComL [uncultured marine gamma proteobacterium EBAC20E09] Length = 273 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 60/249 (24%), Positives = 104/249 (41%), Gaps = 36/249 (14%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 A + +I+ C G E + +Y YE+A + +NF A E Sbjct: 13 IAPILMIAISSCNSDGPEIEQPEKIY-------------YEQAQRRMAAKNFYGAIESLE 59 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 +PF A ++ + + + + + + S E++I +P N+DY Y++ G+S Sbjct: 60 AIENRYPFGKYAEQAQVELIYAHFMNSETEASHSAAEKFIRLHPRHPNIDYAYFMKGLS- 118 Query: 142 AQMIRDVPYDQRATKLMLQY------------MSRIVERYTNS---PYVKGARFYVTVGR 186 RD + R T L ++ + R+ +S PY K Y+ R Sbjct: 119 -SYTRDREFLTRFTDTDLSNRDISGAKESFSELTEFLTRFPDSQYAPYAKQRNVYL---R 174 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LM 243 N +A E+ YY+ YVAAI R V+ N ++ A+ L +Y AL L+ Sbjct: 175 NMIAKNELAAADYYITIDAYVAAIRRANYVIENIPNSSENYRALKLLETSYDALGYSELL 234 Query: 244 DEAREVVSL 252 D+ R V+++ Sbjct: 235 DDVRVVINI 243 >gi|262376644|ref|ZP_06069872.1| competence lipoprotein comL [Acinetobacter lwoffii SH145] gi|262308354|gb|EEY89489.1| competence lipoprotein comL [Acinetobacter lwoffii SH145] Length = 321 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 68/259 (26%), Positives = 116/259 (44%), Gaps = 27/259 (10%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSK 75 Y++ A+T+ + A +VG ++V +D + Q VY +KA L ++ Sbjct: 6 YKMTMLAVTLGIASA---MVGCSSNPKKEV-VDKGPESSEQ--VYIQKAQKALDRNQYTD 59 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + FP + A ++ L +V++ Y+ A +L E +I P+ NVDY YY Sbjct: 60 AAKQLEALETYFPTSQYAPQAQLELLYVKFQQKDYEGAVALAERFIRLNPQHPNVDYAYY 119 Query: 136 LVGMS--------------YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARF 180 + G+S Q RDV Y K+ Q + RY +S Y V A+ Sbjct: 120 VRGVSNMEQNYNGLLRYTSLKQSHRDVSY----LKVAYQNFVDFIRRYPSSTYAVDAAQR 175 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 +G+ +LA E+ R+ +KR Y+AA+ R V+ +Y EA+A + Y L Sbjct: 176 MQFIGQ-ELAEHEMNAARFNIKRKAYLAAVERGLWVIEHYPQTPQIPEALATVAYGYAQL 234 Query: 241 ALMDEAREVVSLIQERYPQ 259 +++ V +++ YP Sbjct: 235 GDKATSQQYVDVLKLNYPN 253 >gi|78357108|ref|YP_388557.1| putative lipoprotein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219513|gb|ABB38862.1| putative lipoprotein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 243 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 45/201 (22%), Positives = 95/201 (47%), Gaps = 9/201 (4%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L++ +++ C ++ + +L D +E++E ++E++++ A +YF++ Sbjct: 12 LSLLATLSGCGIIDY-------FFLPPPEDT--AQELFESGNDAMREKDYASATDYFSKL 62 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +FPF+ A ++ L + +Y AA +E+ T +P K + YV + +G + + Sbjct: 63 KDNFPFSPYAIEAELSLGDAYFLDEEYAMAAEAYKEFETLHPRHKAIPYVLFQIGNANLK 122 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 + Q +Y SR+ E Y S Y + A + R +A E+ + +Y + Sbjct: 123 SFVSIDRPQTNVAEAYEYFSRVRESYPGSEYAQKAGELLGECRRLMAEHELFVADFYWRT 182 Query: 204 GEYVAAIPRFQLVLANYSDAE 224 G++ +A R+Q V + D E Sbjct: 183 GKFRSAASRYQHVAQEFPDVE 203 >gi|264678274|ref|YP_003278181.1| transmembrane protein [Comamonas testosteroni CNB-2] gi|262208787|gb|ACY32885.1| putative transmembrane protein [Comamonas testosteroni CNB-2] Length = 271 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 13/191 (6%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 + KA F + +A+++ L A+ QY AG+ QA + + + +P S +DY Sbjct: 58 YDKAVPLFEKLEGRAAGTPLAQQAQLEKAYAQYKAGEKVQALATLDRFTKLHPASPAMDY 117 Query: 133 VYYLVGM--------SYAQMIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 YL G+ + + R DQ+A K + +V R+ +S Y AR + Sbjct: 118 ALYLKGLVNFNDNLGMFGWLTRQDLSERDQKAAKDSFESFRELVTRFPDSKYSDDARQRM 177 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA- 241 N LA EV + +YY RG YVAAI R Q + +Y + EAM LV++Y AL Sbjct: 178 QYIVNSLAQYEVHVAKYYYSRGAYVAAIARAQAAIKDYQNVPAVREAMVILVKSYDALGM 237 Query: 242 --LMDEAREVV 250 L D+A+ V+ Sbjct: 238 TQLRDDAQRVL 248 >gi|299533527|ref|ZP_07046904.1| putative transmembrane protein [Comamonas testosteroni S44] gi|298718485|gb|EFI59465.1| putative transmembrane protein [Comamonas testosteroni S44] Length = 263 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 13/191 (6%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 + KA F + +A+++ L A+ QY AG+ QA + + + +P S +DY Sbjct: 50 YDKAVPLFEKLEGRAAGTPLAQQAQLEKAYAQYKAGEKVQALATLDRFTKLHPASPAMDY 109 Query: 133 VYYLVGM--------SYAQMIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 YL G+ + + R DQ+A K + +V R+ +S Y AR + Sbjct: 110 ALYLKGLVNFNDNLGMFGWLTRQDLSERDQKAAKDSFESFRELVTRFPDSKYSDDARQRM 169 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA- 241 N LA EV + +YY RG YVAAI R Q + +Y + EAM LV++Y AL Sbjct: 170 QYIVNSLAQYEVHVAKYYYSRGAYVAAIARAQAAIKDYQNVPAVREAMVILVKSYDALGM 229 Query: 242 --LMDEAREVV 250 L D+A+ V+ Sbjct: 230 TQLRDDAQRVL 240 >gi|153215113|ref|ZP_01949820.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|124114904|gb|EAY33724.1| conserved hypothetical protein [Vibrio cholerae 1587] Length = 214 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 10/178 (5%) Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 +PF + + L + Y + E + P + +D+V Y+ G+++ R Sbjct: 33 YPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDR 92 Query: 147 DVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 + +D K ++++RY NSPY + A+ + +N+LA ++ Sbjct: 93 NFMHDLFNIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLAT 152 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +YL+R ++AAI R Q + Y D E A +++A +EAY L L D L+Q Sbjct: 153 ADFYLRREAWIAAINRTQELQKTYPDTEAARKSLAIQLEAYQQLGLTDAIERTKQLMQ 210 >gi|283786207|ref|YP_003366072.1| lipoprotein [Citrobacter rodentium ICC168] gi|282949661|emb|CBG89280.1| putative lipoprotein [Citrobacter rodentium ICC168] Length = 245 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/206 (22%), Positives = 89/206 (43%), Gaps = 10/206 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E+Y A L++ N+ +A +PF +++ L + Y A + Sbjct: 33 NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167 + +I P N+DYV Y+ G++ + + D + + S++V Sbjct: 93 DRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVR 152 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y NS Y A + +++LA E + YY KRG +VA + R + +L ++ D + Sbjct: 153 GYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTKRGAWVAVVNRVEGMLRDFPDTQATR 212 Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253 +A+ + AY + + +A +V +I Sbjct: 213 DALPLMENAYREMQMTTQAEKVAKII 238 >gi|313672442|ref|YP_004050553.1| outer membrane assembly lipoprotein yfio [Calditerrivibrio nitroreducens DSM 19672] gi|312939198|gb|ADR18390.1| outer membrane assembly lipoprotein YfiO [Calditerrivibrio nitroreducens DSM 19672] Length = 254 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/146 (28%), Positives = 75/146 (51%), Gaps = 2/146 (1%) Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+QA +EY+ YP+S + Y +G+SY + V D +L L+ +++ E+Y Sbjct: 83 YEQAIPSYKEYLNIYPDSPDAKRAMYRLGLSYYNQVDTVDRDLENAELALKTFTQLKEKY 142 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 + +N LA KE+ + ++Y + E +AI R + ++ N+ D + E Sbjct: 143 PEFAKENKVDKKIVELKNLLAEKELYVAKFYFRIKEPSSAIKRLEYLVKNFKDTKSYPEG 202 Query: 230 MARLVEAYVALALMDEAREVVSLIQE 255 + L E+YV D+A+EVV+L+ E Sbjct: 203 LIMLAESYVDKP--DKAQEVVNLLTE 226 >gi|297171549|gb|ADI22547.1| DNA uptake lipoprotein [uncultured Oceanospirillales bacterium HF0500_09M11] Length = 187 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 13/148 (8%) Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRD-----VPYDQRATKL-----MLQYMSRIV 166 + ++ YP + +DY Y+ G++ M R + D+ A L + R+V Sbjct: 4 AQRFMRSYPAHQRLDYALYMRGLANFYMERGFFDSMMNTDKSARDLSSARDAFEDFERLV 63 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 R+ +S Y + AR + RN+ A E+ RYY +RG Y+AAI R Q V+ +Y Sbjct: 64 TRFPDSEYSEDARARMVFIRNEFARHELHAARYYARRGAYIAAIGRAQYVVQHYQQTPLV 123 Query: 227 EEAMARLVEAYVAL---ALMDEAREVVS 251 EA+A +V+ Y L AL D++R +++ Sbjct: 124 PEALAIMVKGYERLDRPALADKSRRILA 151 >gi|269962552|ref|ZP_06176900.1| putative lipoprotein [Vibrio harveyi 1DA3] gi|269832747|gb|EEZ86858.1| putative lipoprotein [Vibrio harveyi 1DA3] Length = 242 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 10/206 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L+ N+ A E +PF + + L + Y + Sbjct: 32 ELYADAQTSLQSGNWLSAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIS 91 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168 ++ P + +D+V Y+ G+S+ R+ +D K ++++R Sbjct: 92 RFMRLNPTHEKMDWVLYMRGLSHMAQDRNFMHDLFNVDRSDRDPEPVKKAFDDFKKLLDR 151 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NSPY + ++ + +N+LA ++ +YL+R ++AAI R Q + + D E A + Sbjct: 152 YPNSPYAEDSQKRMVALKNRLADYDLATADFYLRREAWIAAINRAQELQKAFPDTEAARK 211 Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254 ++ +EAY L L D LI+ Sbjct: 212 SLEIQLEAYKQLKLDDSVARTEELIK 237 >gi|94986809|ref|YP_594742.1| DNA uptake lipoprotein [Lawsonia intracellularis PHE/MN1-00] gi|94731058|emb|CAJ54421.1| DNA uptake lipoprotein [Lawsonia intracellularis PHE/MN1-00] Length = 240 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 81/171 (47%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +E+YE A ++E+++++A EY+ + ++P + ++ + KY +A Sbjct: 34 QELYENAKDAMEEKHYAQAAEYYEKLKDNYPLSPYTVEAERALGDALFFDEKYAEAVEAY 93 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 +E+ T +P ++ YV Y +GMS + + + + +Y R+ E + +SPY + Sbjct: 94 KEFETLHPRHPDIPYVLYQIGMSNLKTFISIDRPTTSIQEAYEYFQRVQETFPDSPYAEA 153 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 A + R + E+ I + G+Y A R+ +L N+SD E Sbjct: 154 AVNEMKACRLIMVEHELYIANVFWNMGKYGPAWKRYTFILENFSDVPSVSE 204 >gi|254224982|ref|ZP_04918596.1| conserved hypothetical protein [Vibrio cholerae V51] gi|125622369|gb|EAZ50689.1| conserved hypothetical protein [Vibrio cholerae V51] Length = 253 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 11/216 (5%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D V DV ++Y +A L+ + A E +PF + + L + Y Sbjct: 35 DVVPDVP-PSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKND 93 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLM 158 + E + P + +D+V Y+ G+++ R+ +D K Sbjct: 94 DLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAA 153 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++++RY NSPY + A+ + +N+LA ++ +YL+R ++AAI R Q + Sbjct: 154 FADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQK 213 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 Y + E A +++ +EAY L L D L+Q Sbjct: 214 TYPNTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQ 249 >gi|78485715|ref|YP_391640.1| competence lipoprotein ComL [Thiomicrospira crunogena XCL-2] gi|78364001|gb|ABB41966.1| conserved hypothetical protein [Thiomicrospira crunogena XCL-2] Length = 256 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 11/206 (5%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++ Y A + + + A Y+ + +P+ A +S L A+ Y + + A Sbjct: 32 KDFYSHAKDAFESEQWESAIGYYEKLKAYYPYGKYAEQSYLELAYAYYRYDEPESAQREL 91 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVE 167 EE+I YP+ + Y YYL ++ A I D T ++ M+ ++ Sbjct: 92 EEFIRLYPKHAELAYAYYLRALA-ADSINKSWLDSWLTDPAMRDMASTTKAYQAYIDLLN 150 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 R+ NS Y +R + V RN+LA E ++ YY KR Y+AA R + ++ +Y + Sbjct: 151 RFPNSKYAAKSRERLIVLRNRLARHEYQVAEYYFKRQAYLAAANRAKQIIESYPRSMVNM 210 Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253 +A+ + EAY L + A V S+I Sbjct: 211 KALGLMKEAYAKLGMTQNADNVQSVI 236 >gi|212702987|ref|ZP_03311115.1| hypothetical protein DESPIG_01025 [Desulfovibrio piger ATCC 29098] gi|212673575|gb|EEB34058.1| hypothetical protein DESPIG_01025 [Desulfovibrio piger ATCC 29098] Length = 243 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 20/214 (9%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 AL IF S++ C ++ +YL D +E++E + E+N+ +A E +N Sbjct: 11 LALAIF-SLSGCGIIDM-------IYLPPAEDT--AQEIFEAGNDAMSEKNYVRAVELYN 60 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + +PF+ + L A Y +Y AA +++ + +P + YV Y GMS Sbjct: 61 KLRDTYPFSPYTVDAELALADAYYLDEEYVLAAETYKDFESLHPRHEATPYVIYQTGMSL 120 Query: 142 AQMIRDVPYDQRATKLM---LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 + R + RAT ++ +Y +R+ + Y +SPY K A + R +A E+ I Sbjct: 121 MKQFRSI---DRATTILQEAHEYFARLRQVYPDSPYAKDAEEKMHTCRRLMAEHELYIAD 177 Query: 199 YYLKRGEYVAAIPRFQLVLANYSD----AEHAEE 228 + +Y A R++ V + D A HA+E Sbjct: 178 VFWHMEKYGPAWRRYEYVSETFPDVPEVASHAKE 211 >gi|262373261|ref|ZP_06066540.1| competence lipoprotein comL [Acinetobacter junii SH205] gi|262313286|gb|EEY94371.1| competence lipoprotein comL [Acinetobacter junii SH205] Length = 365 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 24/252 (9%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQ 82 L + +A F VG S+ +D Q VY EKA L ++ A + Sbjct: 11 LALSLGVASAF-VGCSSNPSKKEVVDKGPQSSEQ--VYFEKAQKSLDRNQYTDAVKSLEA 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG---- 138 +P +++ L + ++ Y+ +L E +I P+ NVDY YY+ G Sbjct: 68 LDTYYPTGRYTQQAQLELLYAKFKQKDYEGTIALAERFIRLNPQHPNVDYAYYVRGVANM 127 Query: 139 -MSYAQMIR---------DVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRN 187 M+Y +IR DV Y K+ Q ++ R+ +S Y V A+ +G+ Sbjct: 128 EMNYDSLIRYTSLQQSHRDVSY----VKVAYQNFVDLIRRFPSSKYSVDAAQRMKFIGQ- 182 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 +LA E+ R+ ++R ++AA R Q V+ +Y EA+A L +Y L A+ Sbjct: 183 ELAESEMNAARFNIQRKAWLAAAERAQWVIEHYPQTPQTPEALATLAYSYQKLGDNSTAQ 242 Query: 248 EVVSLIQERYPQ 259 + + +++ YP Sbjct: 243 QYIEILKLNYPN 254 >gi|82778019|ref|YP_404368.1| outer membrane protein assembly complex subunit YfiO [Shigella dysenteriae Sd197] gi|309789451|ref|ZP_07684037.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|81242167|gb|ABB62877.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gi|308922694|gb|EFP68215.1| conserved hypothetical protein [Shigella dysenteriae 1617] Length = 245 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P N+DYV Y+ G++ + + D + + S++V Sbjct: 94 RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA E + YY +RG +VA + R + +L NY D + + Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRNYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + + +A +V +I Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238 >gi|312881915|ref|ZP_07741678.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122] gi|309370433|gb|EFP97922.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122] Length = 241 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/225 (22%), Positives = 103/225 (45%), Gaps = 19/225 (8%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS+DV V D+ E+Y A L+ N++ A + +PF + + L Sbjct: 20 SSKDV----VPDIP-PSELYSDAQSSLQSGNWTNAIKKLEALDSRYPFGAYSEQVQLDLI 74 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY----------- 150 + Y + +++ + ++ P ++ +D+V Y+ G+++ M +D + Sbjct: 75 YAYYKNDELALSSATIDRFMRLNPTNERLDWVLYMRGLTH--MAQDQNFMHSVFNIDRSD 132 Query: 151 -DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 D K ++++RY +S Y + A+ + +N+LA ++ +YL+R ++AA Sbjct: 133 RDPEPVKKAFADFKKLLQRYPDSQYAEDAKLRLIALKNRLANYDLATADFYLRREAWIAA 192 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 I R Q + Y + E A +++ +EAY L + + LIQ Sbjct: 193 IKRCQEIQKTYPNTEAARQSLPIQLEAYKQLGMQEAIDRTKMLIQ 237 >gi|119775738|ref|YP_928478.1| putative lipoprotein [Shewanella amazonensis SB2B] gi|119768238|gb|ABM00809.1| putative lipoprotein [Shewanella amazonensis SB2B] Length = 283 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/250 (23%), Positives = 101/250 (40%), Gaps = 13/250 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +YKFA S F + SS D V + +Y +A ++ NFSKA + Sbjct: 30 MYKFAKG---SAVALFALALGACSSSGSQEDLVLSQKSPEALYAQARTSMELGNFSKAVK 86 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 FPF + L + Y QA + + ++ P +VDYV Y+ G Sbjct: 87 SLEALDSRFPFGAHKTQVQLDMIYAYYKLDDTPQAIANIDRFLRLNPTHPDVDYVQYMRG 146 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + Q I D + + R+++ Y NS Y A + +N+ Sbjct: 147 LVNMQADSYLFHDMMNIDRTDRDPKNAMDAFKDFERLIKTYPNSKYAADAHQRMQFLKNR 206 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA +++ YY+K + AA R Q V+ ++ E A+ + ++Y L + Sbjct: 207 LARYSIQVAEYYVKMNAWSAAAVRAQTVMESFPGTPSTERALEIMAQSYDELGQEQLKKH 266 Query: 249 VVSLIQERYP 258 V+ ++QE +P Sbjct: 267 VLMVMQENFP 276 >gi|186475731|ref|YP_001857201.1| putative competence lipoprotein, ComL [Burkholderia phymatum STM815] gi|184192190|gb|ACC70155.1| putative competence lipoprotein, ComL [Burkholderia phymatum STM815] Length = 285 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 14/215 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y +A L +F K +YF PF A+++ + A+ + + A Sbjct: 54 NNKLYTEAQDALSGGDFGKCAKYFEALEGRDPFGHFAQQAQINVAYCNWKDSETDAADQA 113 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSR 164 +I +P+ ++ Y YYL GM + Q + + D ++ + Sbjct: 114 VNRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSE--RDPKSLRESYDAFKV 171 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V++Y S Y A + N LA+ EV YY +RG YVAAI R QL + Y +A Sbjct: 172 VVDKYPQSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAP 231 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 E+A+ ++ +Y L A + ++ +P Sbjct: 232 AIEDALHIMMLSYQKLDQPQLAEDTKRVLAGTFPD 266 >gi|300718036|ref|YP_003742839.1| outer membrane assembly lipoprotein [Erwinia billingiae Eb661] gi|299063872|emb|CAX60992.1| outer membrane assembly lipoprotein [Erwinia billingiae Eb661] Length = 243 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ NF A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 ++ P N+DYV Y+ G++ + I D + S+++ Sbjct: 94 RFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRSDRDPTHARDAFHDFSQLLRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y AR + +++LA E+ + ++Y KR YVA + R + ++ +Y D + Sbjct: 154 YPNSQYATDARKRLVYLKDRLAKYELSVAQFYTKREAYVAVVNRVEQMMKDYPDTQATRT 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY L L EA +V LI Sbjct: 214 ALPLMENAYRQLQLNAEADKVAKLI 238 >gi|84393595|ref|ZP_00992348.1| DNA uptake lipoprotein [Vibrio splendidus 12B01] gi|84375804|gb|EAP92698.1| DNA uptake lipoprotein [Vibrio splendidus 12B01] Length = 242 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 57/241 (23%), Positives = 103/241 (42%), Gaps = 17/241 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LT+ +AV LVG S+ ++ D V +Y A L+ ++ A E Sbjct: 4 LTLSGLLAVSLLVGC--SSTEEIVPDVPPSV-----LYSDAQESLQSGSWLSAIEKLEAL 56 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF + + L + Y + ++ P + D+V Y+ G+++ Sbjct: 57 DSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFLRLNPTHEKQDWVLYMRGLTHMA 116 Query: 144 MIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 R+ +D KL R++ER+ +SPY + A+ + +N+LA + Sbjct: 117 QDRNFMHDIFNIDRSDRDPEPVKLAFADFKRLLERFPSSPYAEDAQKRMFALKNRLAEYD 176 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +YL+R ++AA+ R Q + Y D A +++ +EAY L L D A LI Sbjct: 177 LATADFYLRREAWIAAVNRTQELQKTYPDTIAARKSLDIQLEAYKQLGLEDAASRTEKLI 236 Query: 254 Q 254 + Sbjct: 237 E 237 >gi|325294284|ref|YP_004280798.1| outer membrane assembly lipoprotein YfiO [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064732|gb|ADY72739.1| outer membrane assembly lipoprotein YfiO [Desulfurobacterium thermolithotrophum DSM 11699] Length = 316 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 62/120 (51%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++ ++ AA EE++ YP S + +G+SY +++ +DQ TK ++ + Sbjct: 72 FNDQDFENAALNYEEFLDLYPASPRAKDALFRLGISYLNLVKGPQWDQTFTKKAIRAFEK 131 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 V+ + N P V+ A+ Y + R LA EV IG Y ++ A+I R+++V Y D E Sbjct: 132 FVKEFPNDPRVEKAKIYKNIARKILAENEVYIGGTYDMLHKFTASINRYKIVKEKYRDVE 191 >gi|113971329|ref|YP_735122.1| putative lipoprotein [Shewanella sp. MR-4] gi|114048566|ref|YP_739116.1| putative lipoprotein [Shewanella sp. MR-7] gi|113886013|gb|ABI40065.1| putative lipoprotein [Shewanella sp. MR-4] gi|113890008|gb|ABI44059.1| putative lipoprotein [Shewanella sp. MR-7] Length = 282 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 10/211 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A ++ N+SKA FPF + L + Y + + Sbjct: 67 LYSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDR 126 Query: 120 YITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERY 169 +I P ++DYVYY+ G+ Q I D + + + R+++ Y Sbjct: 127 FIRLNPTHPDIDYVYYMRGLVNMQADSYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTY 186 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 NS Y A+ + +N+LA +++ YYLK + AA R Q VL Y E A Sbjct: 187 PNSKYAADAQKRMLSLKNRLAKYSIQVAEYYLKMNAWSAAAVRAQSVLETYPGTPSTERA 246 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + EAY L + V+ ++Q +P Sbjct: 247 LEIMAEAYGELGQNQLKQNVLMVMQANFPNN 277 >gi|322614487|gb|EFY11418.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621448|gb|EFY18301.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624309|gb|EFY21142.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629392|gb|EFY26170.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633632|gb|EFY30374.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638325|gb|EFY35023.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639763|gb|EFY36446.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647375|gb|EFY43871.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650455|gb|EFY46865.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322661446|gb|EFY57671.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662646|gb|EFY58854.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667019|gb|EFY63194.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671388|gb|EFY67511.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677605|gb|EFY73668.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681569|gb|EFY77599.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322683969|gb|EFY79979.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195538|gb|EFZ80716.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197911|gb|EFZ83034.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203089|gb|EFZ88121.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205330|gb|EFZ90305.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210520|gb|EFZ95404.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218199|gb|EGA02911.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221535|gb|EGA05948.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223755|gb|EGA08060.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230962|gb|EGA15080.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234686|gb|EGA18772.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238725|gb|EGA22775.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241424|gb|EGA25455.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246878|gb|EGA30845.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253277|gb|EGA37107.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257073|gb|EGA40782.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260454|gb|EGA44065.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264489|gb|EGA47995.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269624|gb|EGA53077.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 245 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 10/206 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E+Y A L++ N+ +A +PF +++ L + Y A + Sbjct: 33 NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167 + ++ P N+DYV Y+ G++ + + D + + S++V Sbjct: 93 DRFMRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVR 152 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y NS Y A + +++LA E + YY RG +VA + R + +L NY D + Sbjct: 153 SYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATR 212 Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253 +A+ + AY + L +A +V +I Sbjct: 213 DALPLMENAYRQMQLNAQADKVAKII 238 >gi|322656052|gb|EFY52352.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] Length = 245 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 10/206 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E+Y A L++ N+ +A +PF +++ L + Y A + Sbjct: 33 NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167 + ++ P N+DYV Y+ G++ + + D + + S++V Sbjct: 93 DRFMRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVR 152 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y NS Y A + +++LA E + YY RG +VA + R + +L NY D + Sbjct: 153 SYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATR 212 Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253 +A+ + AY + L +A +V +I Sbjct: 213 DALPLMENAYRQMQLNAQADKVAKII 238 >gi|114561851|ref|YP_749364.1| putative lipoprotein [Shewanella frigidimarina NCIMB 400] gi|114333144|gb|ABI70526.1| putative lipoprotein [Shewanella frigidimarina NCIMB 400] Length = 253 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 17/252 (6%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y++ K A + S+A+ DV + DV +Y +A ++ N+SKA Sbjct: 2 YKIAKGAALVLLSLAITACSSSPEDD--DVASKASPDV-----LYSQARTSMELGNYSKA 54 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 FPF + L F Y + + ++ P N+DYVYY+ Sbjct: 55 VRSLEALDSRFPFGPHKTQVQLDLIFAYYKMDDAASGLANIDRFLRLNPTHPNIDYVYYM 114 Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 G++ Q I D + + + R+++ Y NS Y A+ + + Sbjct: 115 RGLTNMQADNYLFHDLMNIDRTDRDPKNAQDAFKDFDRLIKSYPNSKYSADAQQRMQFLK 174 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 N+LA +++ YY+K + AA R Q V+ + E A+ +V+AY L Sbjct: 175 NRLAKYSIQVAEYYIKMNAWSAAAVRAQSVMEKFPGTPSTERALEIMVKAYGELGQEKLQ 234 Query: 247 REVVSLIQERYP 258 + V ++++ +P Sbjct: 235 QNVKTVMKANFP 246 >gi|16765979|ref|NP_461594.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56414630|ref|YP_151705.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161502238|ref|YP_001569350.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|161615593|ref|YP_001589558.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167553893|ref|ZP_02347636.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992441|ref|ZP_02573539.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168234183|ref|ZP_02659241.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168244684|ref|ZP_02669616.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168262166|ref|ZP_02684139.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464165|ref|ZP_02698082.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168822473|ref|ZP_02834473.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444235|ref|YP_002041927.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448106|ref|YP_002046669.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472505|ref|ZP_03078489.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197248037|ref|YP_002147566.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197263157|ref|ZP_03163231.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197363557|ref|YP_002143194.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198241761|ref|YP_002216674.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200388577|ref|ZP_03215189.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929736|ref|ZP_03220810.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205353702|ref|YP_002227503.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858013|ref|YP_002244664.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224584516|ref|YP_002638314.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|16421210|gb|AAL21553.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56128887|gb|AAV78393.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|160863585|gb|ABX20208.1| hypothetical protein SARI_00263 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] gi|161364957|gb|ABX68725.1| hypothetical protein SPAB_03374 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402898|gb|ACF63120.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406410|gb|ACF66629.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194458869|gb|EDX47708.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195633350|gb|EDX51764.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095034|emb|CAR60580.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197211740|gb|ACH49137.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241412|gb|EDY24032.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197936277|gb|ACH73610.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199605675|gb|EDZ04220.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204321455|gb|EDZ06655.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205273483|emb|CAR38460.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205321763|gb|EDZ09602.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329289|gb|EDZ16053.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205331816|gb|EDZ18580.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336453|gb|EDZ23217.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205341181|gb|EDZ27945.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349291|gb|EDZ35922.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709816|emb|CAR34168.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224469043|gb|ACN46873.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247857|emb|CBG25686.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994804|gb|ACY89689.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159210|emb|CBW18725.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913653|dbj|BAJ37627.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087096|emb|CBY96864.1| UPF0169 lipoprotein CC_1984 Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223455|gb|EFX48520.1| putative component of the lipoprotein assembly complex forms a complex with YaeT, YfgL, and NlpB [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130997|gb|ADX18427.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326624430|gb|EGE30775.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628808|gb|EGE35151.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332989588|gb|AEF08571.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 245 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 10/206 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E+Y A L++ N+ +A +PF +++ L + Y A + Sbjct: 33 NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167 + ++ P N+DYV Y+ G++ + + D + + S++V Sbjct: 93 DRFMRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVR 152 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y NS Y A + +++LA E + YY RG +VA + R + +L NY D + Sbjct: 153 SYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATR 212 Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253 +A+ + AY + L +A +V +I Sbjct: 213 DALPLMENAYRQMQLNAQADKVAKII 238 >gi|320182490|gb|EFW57384.1| outer membrane protein assembly complex subunit YfiO [Shigella boydii ATCC 9905] Length = 245 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P N+DYV Y+ G++ + + D + + S++V Sbjct: 94 RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA E + YY +RG +VA + R + +L +YSD + + Sbjct: 154 YPNSQYTTDAAKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYSDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + + +A +V +I Sbjct: 214 ALPLMENAYRQMQINAQAEKVAKII 238 >gi|62181236|ref|YP_217653.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62128869|gb|AAX66572.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715722|gb|EFZ07293.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 245 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 10/206 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E+Y A L++ N+ +A +PF +++ L + Y A + Sbjct: 33 NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167 + ++ P N+DYV Y+ G++ + + D + + S++V Sbjct: 93 DRFMRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVR 152 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y NS Y A + +++LA E + YY RG +VA + R + +L NY D + Sbjct: 153 SYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATR 212 Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253 +A+ + AY + L +A +V +I Sbjct: 213 DALPLMENAYRQMQLNAQADKVAKII 238 >gi|293411986|ref|ZP_06654709.1| conserved hypothetical protein [Escherichia coli B354] gi|331664162|ref|ZP_08365071.1| putative lipoprotein [Escherichia coli TA143] gi|291468757|gb|EFF11248.1| conserved hypothetical protein [Escherichia coli B354] gi|331058619|gb|EGI30597.1| putative lipoprotein [Escherichia coli TA143] Length = 245 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P N+DYV Y+ G++ + + D + + S++V Sbjct: 94 RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA E + +YY +RG +VA + R + +L +Y D + + Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAKYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + + +A +V +I Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238 >gi|222034299|emb|CAP77040.1| UPF0169 lipoprotein yfiO [Escherichia coli LF82] Length = 245 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A ++ + Sbjct: 34 EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAVID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P N+DYV Y+ G++ + + D + + S++V Sbjct: 94 RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA E + YY +RG +VA + R + +L +Y D + + Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + + +A +V +I Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238 >gi|323159116|gb|EFZ45109.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E128010] Length = 245 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P N+DYV Y+ G++ + + D + + S++V Sbjct: 94 RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA E + YY +RG +VA + R + +L +Y D + + Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGILRDYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + + +A +V +I Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238 >gi|331684251|ref|ZP_08384843.1| putative lipoprotein [Escherichia coli H299] gi|331077866|gb|EGI49072.1| putative lipoprotein [Escherichia coli H299] Length = 245 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P N+DYV Y+ G++ + + D + + S++V Sbjct: 94 RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA E + YY +RG +VA + R + +L +Y D + + Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + L +A +V +I Sbjct: 214 ALPLMENAYRQMQLNAQAEKVAKII 238 >gi|126173260|ref|YP_001049409.1| putative lipoprotein [Shewanella baltica OS155] gi|152999619|ref|YP_001365300.1| putative lipoprotein [Shewanella baltica OS185] gi|160874238|ref|YP_001553554.1| putative lipoprotein [Shewanella baltica OS195] gi|217974429|ref|YP_002359180.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS223] gi|304410383|ref|ZP_07392001.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS183] gi|307304475|ref|ZP_07584225.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica BA175] gi|125996465|gb|ABN60540.1| putative lipoprotein [Shewanella baltica OS155] gi|151364237|gb|ABS07237.1| putative lipoprotein [Shewanella baltica OS185] gi|160859760|gb|ABX48294.1| putative lipoprotein [Shewanella baltica OS195] gi|217499564|gb|ACK47757.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS223] gi|304350867|gb|EFM15267.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS183] gi|306911877|gb|EFN42301.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica BA175] gi|315266472|gb|ADT93325.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS678] Length = 253 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 10/211 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A ++ N+SKA FPF + L + Y + + Sbjct: 38 LYTQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDR 97 Query: 120 YITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERY 169 +I P ++DYV+Y+ G+ Q I D + + + R+++ Y Sbjct: 98 FIRLNPTHPDIDYVFYMRGLVNMQADNYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTY 157 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 NS Y A+ + +N+LA +++ YYLK + AA R Q V+ Y E A Sbjct: 158 PNSKYAADAQKRMLALKNRLARYSIQVAEYYLKMNAWSAAAIRAQSVMETYPGTPSNERA 217 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 + ++EAY L + V+ ++Q YP Sbjct: 218 LEIMIEAYGELGQSKLKQNVLMVMQANYPNN 248 >gi|27363949|ref|NP_759477.1| putative component of the lipoprotein assembly complex [Vibrio vulnificus CMCP6] gi|37678896|ref|NP_933505.1| putative lipoprotein [Vibrio vulnificus YJ016] gi|27360066|gb|AAO09004.1| Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Vibrio vulnificus CMCP6] gi|37197637|dbj|BAC93476.1| putative lipoprotein [Vibrio vulnificus YJ016] Length = 241 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 10/206 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y +A L+ N+ A E +PF + + L + Y + Sbjct: 32 ELYAEAQTSLQGGNWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIS 91 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168 + P + +D+V Y+ G+++ R+ +D K +++ER Sbjct: 92 RFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRSDRDPEPVKQAFDDFKKLLER 151 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NSPY + ++ + +N+LA ++ YYL+R ++AAI R Q + Y D A + Sbjct: 152 YPNSPYAEDSQKRMFALKNRLAEYDLATADYYLRREAWIAAINRSQELQKTYPDTIAARK 211 Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254 ++ +EAY L L D LI+ Sbjct: 212 SLKIQLEAYKQLGLQDAIARTEELIR 237 >gi|260771110|ref|ZP_05880037.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio furnissii CIP 102972] gi|260613707|gb|EEX38899.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio furnissii CIP 102972] gi|315179285|gb|ADT86199.1| hypothetical protein vfu_A01006 [Vibrio furnissii NCTC 11218] Length = 241 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 10/206 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L+ N+ A E +PF + + L + Y + E Sbjct: 32 QLYTEAQTSLQGGNWMTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIE 91 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168 ++ P + +D+V Y+ G+S+ R+ +D K R+++R Sbjct: 92 RFMRLNPTHEKMDWVLYMRGLSHMAQDRNFMHDLFNVDRSDRDPEPVKAAFADFKRLLQR 151 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y + A+ + +N+LA ++ +YL+R ++AAI R Q + Y D E A + Sbjct: 152 YPNSSYAEDAQRRMFALKNRLADYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARK 211 Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254 ++ ++AY L L D L++ Sbjct: 212 SLKIQLQAYKELGLKDSIARTQQLME 237 >gi|193076603|gb|ABO11274.2| putative competence protein (ComL) [Acinetobacter baumannii ATCC 17978] Length = 385 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 22/250 (8%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + +A F VG S+ +D+ Q ++KA L + A + Sbjct: 11 LALSLGVASAF-VGCSSNPSKKEVVDTGPQSSEQ-AYFDKAQKALDRGQYLDATKSLEAI 68 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ G+S + Sbjct: 69 DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNME 128 Query: 144 MI--------------RDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188 M RDV Y K+ Q ++ R+ +S Y V A+ +G+ + Sbjct: 129 MNYDSLLRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 183 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++ Sbjct: 184 LAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQ 243 Query: 249 VVSLIQERYP 258 + +++ YP Sbjct: 244 YIEVLKLNYP 253 >gi|262273644|ref|ZP_06051457.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Grimontia hollisae CIP 101886] gi|262222059|gb|EEY73371.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Grimontia hollisae CIP 101886] Length = 243 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 45/206 (21%), Positives = 93/206 (45%), Gaps = 10/206 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y++A + L E N++ A + +PF + + L + Y + + Sbjct: 32 ELYQEAQVSLNEGNWNTAIQKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGEATID 91 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168 +I P +D+V Y+ G++ R + +D + R+++R Sbjct: 92 RFIRMNPGHPEMDWVLYMRGLTNMAQDRSLVHDLLSMEREDRDPEPVRRAFVDFRRLLDR 151 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y +S Y A + +N+LA E+ +Y++R +VA I R Q + ++ D A+ Sbjct: 152 YPDSDYAADAAKRLVALKNRLADYELATADFYVRREAWVAVINRCQQIQRDFPDTNAAKR 211 Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254 ++ +++AY AL L + A+ + L++ Sbjct: 212 SLPMMLKAYEALKLEEPAQRIRELMK 237 >gi|169796975|ref|YP_001714768.1| putative competence protein (ComL) [Acinetobacter baumannii AYE] gi|213156620|ref|YP_002318281.1| putative competence protein [Acinetobacter baumannii AB0057] gi|215484436|ref|YP_002326669.1| Competence lipoprotein comL precursor [Acinetobacter baumannii AB307-0294] gi|260555734|ref|ZP_05827954.1| competence lipoprotein comL [Acinetobacter baumannii ATCC 19606] gi|301346836|ref|ZP_07227577.1| DNA uptake lipoprotein [Acinetobacter baumannii AB056] gi|301511994|ref|ZP_07237231.1| DNA uptake lipoprotein [Acinetobacter baumannii AB058] gi|301594460|ref|ZP_07239468.1| DNA uptake lipoprotein [Acinetobacter baumannii AB059] gi|169149902|emb|CAM87795.1| putative competence protein (ComL) [Acinetobacter baumannii AYE] gi|213055780|gb|ACJ40682.1| putative competence protein [Acinetobacter baumannii AB0057] gi|213986423|gb|ACJ56722.1| Competence lipoprotein comL precursor [Acinetobacter baumannii AB307-0294] gi|260410645|gb|EEX03943.1| competence lipoprotein comL [Acinetobacter baumannii ATCC 19606] Length = 385 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 22/250 (8%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + +A F VG S+ +D+ Q ++KA L + A + Sbjct: 11 LALSLGVASAF-VGCSSNPSKKEVVDTGPQSSEQ-AYFDKAQKALDRGQYLDATKSLEAI 68 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ G+S + Sbjct: 69 DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNME 128 Query: 144 MI--------------RDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188 M RDV Y K+ Q ++ R+ +S Y V A+ +G+ + Sbjct: 129 MNYDSLLRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 183 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++ Sbjct: 184 LAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQ 243 Query: 249 VVSLIQERYP 258 + +++ YP Sbjct: 244 YIEVLKLNYP 253 >gi|262401595|ref|ZP_06078161.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio sp. RC586] gi|262352012|gb|EEZ01142.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio sp. RC586] Length = 240 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 47/206 (22%), Positives = 90/206 (43%), Gaps = 10/206 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y +A L+ ++ A E +PF + + L + Y + E Sbjct: 32 ELYSEAQTALQSGSWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIE 91 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168 + P + +D+V Y+ G+++ R+ +D K ++++R Sbjct: 92 RFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNVDRSDRDPEPVKSAFADFKKLLQR 151 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NSPY + A+ + +N+LA ++ +YL+R ++AAI R Q + Y D E A + Sbjct: 152 YPNSPYAEDAQRRMYALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARK 211 Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254 A+ +EAY L + + L++ Sbjct: 212 ALDIQLEAYQQLGMTEAVERTKQLMK 237 >gi|169634098|ref|YP_001707834.1| putative competence protein (ComL) [Acinetobacter baumannii SDF] gi|169152890|emb|CAP01928.1| putative competence protein (ComL) [Acinetobacter baumannii] Length = 385 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 22/250 (8%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + +A F VG S+ +D+ Q ++KA L + A + Sbjct: 11 LALSLGVASAF-VGCSSNPSKKEVVDTGPQSSEQ-AYFDKAQKALDRGQYLDATKSLEAI 68 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ G+S + Sbjct: 69 DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNME 128 Query: 144 MI--------------RDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188 M RDV Y K+ Q ++ R+ +S Y V A+ +G+ + Sbjct: 129 MNYDSLLRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 183 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++ Sbjct: 184 LAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQ 243 Query: 249 VVSLIQERYP 258 + +++ YP Sbjct: 244 YIEVLKLNYP 253 >gi|53804664|ref|YP_113450.1| competence lipoprotein ComL [Methylococcus capsulatus str. Bath] gi|53758425|gb|AAU92716.1| competence lipoprotein ComL [Methylococcus capsulatus str. Bath] Length = 286 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 10/212 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + Y +A + + ++ KA + + + +PF A ++ + AF Y + + A + + Sbjct: 51 QFYAEAKHAMMDGSYDKAIKLYEKLEARYPFGDYATQAQIDVAFCYYKNNEPESAIAAVD 110 Query: 119 EYITQYPESKNVDYVYYLVGM-SYAQMI----RDVPYD--QR---ATKLMLQYMSRIVER 168 +I P +VDY YYL G+ +Y + I R +P D QR + + ++ + Sbjct: 111 RFIKLNPTEPHVDYAYYLRGLINYNRGIGFIDRWLPTDSSQRDPGSARDAYNDFETLLNK 170 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NS Y + AR RN LA ++ + YY++R YVAAI R V+ Y + Sbjct: 171 FPNSVYREDARQRAIALRNNLAMYDIHVADYYMRRRAYVAAIRRSAEVVQKYQRTQAIPH 230 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 A+ + +AY L + A ++ + Y +G Sbjct: 231 ALRIMEDAYRQLDMPQMADDIARVYALNYAEG 262 >gi|297569607|ref|YP_003690951.1| outer membrane assembly lipoprotein YfiO [Desulfurivibrio alkaliphilus AHT2] gi|296925522|gb|ADH86332.1| outer membrane assembly lipoprotein YfiO [Desulfurivibrio alkaliphilus AHT2] Length = 268 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 52/228 (22%), Positives = 98/228 (42%), Gaps = 18/228 (7%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 +RD ++ D R + + + + + +A E F +PF+ V + L +A Sbjct: 35 NRDQSPEAEQDPRAPELLAMEGMEKFNQARYRQALEIFKDLKERYPFSSVGVLAELKAAD 94 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +Y +A L +E+ +P ++ + YV + +GM + Q I + D + Sbjct: 95 ATYYLRRYDEALPLYQEFENNHPTNEAIPYVMFQIGMCHYQRIGTIDRDPAHALNAIAAF 154 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 +R+ + +SPY K A R+ +A E+ I +YL +Y Sbjct: 155 TRLNRAFPDSPYRKEAEARTMAARDFMARHEMFIAGFYLNTKKY---------------- 198 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQE-RYPQGYWARYVETL 269 + AE +A L++ Y L+ EA EV++ ++ P+ W +V L Sbjct: 199 -DQAERRLAYLIDNYPESELIPEAEEVLAALEAGNPPRRNWRDFVPDL 245 >gi|332855565|ref|ZP_08435939.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii 6013150] gi|332868376|ref|ZP_08438122.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii 6013113] gi|332727389|gb|EGJ58822.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii 6013150] gi|332733435|gb|EGJ64616.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii 6013113] Length = 376 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 22/250 (8%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + +A F VG S+ +D+ Q ++KA L + A + Sbjct: 2 LALSLGVASAF-VGCSSNPSKKEVVDTGPQSSEQ-AYFDKAQKALDRGQYLDATKSLEAI 59 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ G+S + Sbjct: 60 DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNME 119 Query: 144 MI--------------RDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188 M RDV Y K+ Q ++ R+ +S Y V A+ +G+ + Sbjct: 120 MNYDSLLRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 174 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++ Sbjct: 175 LAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQ 234 Query: 249 VVSLIQERYP 258 + +++ YP Sbjct: 235 YIEVLKLNYP 244 >gi|127513879|ref|YP_001095076.1| putative lipoprotein [Shewanella loihica PV-4] gi|126639174|gb|ABO24817.1| putative lipoprotein [Shewanella loihica PV-4] Length = 252 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 10/211 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A ++ N+SKA +PF + L + Y + + Sbjct: 38 LYSQARTSMELGNYSKAVRSLEALDSRYPFGPHKTQVQLDLIYAYYKLDDSASGIANIDR 97 Query: 120 YITQYPESKNVDYVYYLVGMSYAQ----MIRDV------PYDQRATKLMLQYMSRIVERY 169 +I P K++DYVYY+ G+ Q M D+ D +A + + R++++Y Sbjct: 98 FIRLNPTHKDIDYVYYMRGLVNMQSDNYMFHDMLNIDRTDRDPKAAQDAFKDFDRLIKQY 157 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 NS Y A+ + +N+LA + + YY+K + AA R Q VL Y E A Sbjct: 158 PNSKYAADAQKRMQFLKNRLAKYAITVAEYYIKMNAWSAAAVRAQTVLETYPGTPSTERA 217 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + AY L V+ ++Q +P Sbjct: 218 LEIMATAYEELGQQKLKDHVLMVMQSNFPNN 248 >gi|239501206|ref|ZP_04660516.1| DNA uptake lipoprotein [Acinetobacter baumannii AB900] Length = 385 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 22/250 (8%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + +A F VG S+ +D+ Q ++KA L + A + Sbjct: 11 LALSLGVASAF-VGCSSNPSKKEVVDTGPQSSEQ-AYFDKAQKALDRGQYLDATKSLEAI 68 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ G+S + Sbjct: 69 DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNME 128 Query: 144 MI--------------RDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188 M RDV Y K+ Q ++ R+ +S Y V A+ +G+ + Sbjct: 129 MNYDSLLRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 183 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++ Sbjct: 184 LAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQ 243 Query: 249 VVSLIQERYP 258 + +++ YP Sbjct: 244 YIEVLKLNYP 253 >gi|21672663|ref|NP_660730.1| hypothetical protein BUsg389 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25009590|sp|Q8K9E8|Y389_BUCAP RecName: Full=UPF0169 protein BUsg_389 gi|21623300|gb|AAM67941.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 243 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 50/205 (24%), Positives = 96/205 (46%), Gaps = 12/205 (5%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y+K LKE+NF KA + + K + + Y + A EE Sbjct: 35 LYQKCRKELKEKNFYKAIFDLKKIENNHAINFNNDKIKMNLIYAYYKVSDFNTAEKNIEE 94 Query: 120 YITQYPESKNVDYVYY---LVGMSYAQMIRDVPYDQR--------ATKLMLQYMSRIVER 168 +I +YP+ N+DY++Y L+ +S + I + + A K Q + + V Sbjct: 95 FIKKYPKHLNIDYIFYIQSLINISLDKKIFHNVFPIQIYKSNPIYAIKAFFQ-LKKFVYN 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS YV A+ + + +L+ ++ I +YY +Y+A I R + +L Y + A + Sbjct: 154 YPNSIYVINAKKDLFYLKKRLSEHDLTILKYYFYHKKYIAVINRGEEILQKYPETSAAID 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 + + ++++AL + D A+++ +I Sbjct: 214 TLKYMEKSFLALKIFDTAKKISKII 238 >gi|260553982|ref|ZP_05826247.1| competence lipoprotein comL [Acinetobacter sp. RUH2624] gi|260404868|gb|EEW98373.1| competence lipoprotein comL [Acinetobacter sp. RUH2624] Length = 373 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 22/250 (8%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + +A F VG S+ +D+ Q +EKA L + +A + Sbjct: 11 LALSLGVASAF-VGCSSNPSKKEVVDTGPQSSEQ-AYFEKAQKSLDRGQYLEATKSLEAI 68 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS--- 140 +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ G+S Sbjct: 69 DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNME 128 Query: 141 -----------YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188 Q RD+ Y K+ Q ++ R+ +S Y V A+ +G+ + Sbjct: 129 LNYDSLLRYTSLQQSHRDISY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 183 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ R+ +KR +VAA R Q V+ +Y EA+A L +Y L +++ Sbjct: 184 LAESEMNAARFNVKRKAWVAAAERSQWVIEHYPQTPQIPEALATLAYSYDQLGDKATSQQ 243 Query: 249 VVSLIQERYP 258 + +++ YP Sbjct: 244 YIEVLKLNYP 253 >gi|94265668|ref|ZP_01289408.1| putative lipoprotein [delta proteobacterium MLMS-1] gi|93453795|gb|EAT04164.1| putative lipoprotein [delta proteobacterium MLMS-1] Length = 272 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/157 (25%), Positives = 77/157 (49%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 + N+ KA + F++ +PF+ V + L +A + Y++A L +E+ +P + Sbjct: 61 MNRGNYRKALKLFDEIKERYPFSSVGPLAELKAADANFHLRNYREAHLLYQEFENNHPTN 120 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 + + YV + +GMS+ + I + D + SR+ Y +SPY + A + R+ Sbjct: 121 EAMPYVLFQMGMSHYRRIDTIDRDPAHAINAVAAFSRLNRAYPDSPYREEAEARLLAARD 180 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 LA E+ + +Y+K EY A R +L Y +++ Sbjct: 181 FLARHEMFVATFYVKTKEYQQAEGRLNHLLETYPESD 217 >gi|24113931|ref|NP_708441.1| outer membrane protein assembly complex subunit YfiO [Shigella flexneri 2a str. 301] gi|30063990|ref|NP_838161.1| outer membrane protein assembly complex subunit YfiO [Shigella flexneri 2a str. 2457T] gi|24053035|gb|AAN44148.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30042246|gb|AAP17971.1| hypothetical protein S2828 [Shigella flexneri 2a str. 2457T] gi|281602001|gb|ADA74985.1| putative lipoprotein [Shigella flexneri 2002017] gi|313648269|gb|EFS12713.1| hypothetical protein SF2457T_3266 [Shigella flexneri 2a str. 2457T] gi|332753863|gb|EGJ84240.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri 4343-70] gi|332754014|gb|EGJ84386.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-671] gi|332755663|gb|EGJ86026.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri 2747-71] gi|332765570|gb|EGJ95783.1| bamD [Shigella flexneri 2930-71] gi|332997823|gb|EGK17433.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-218] gi|333015915|gb|EGK35251.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-304] Length = 245 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P N+DYV Y+ G++ + + D + + S++V Sbjct: 94 RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA E + YY +RG +VA + R + +L +Y D + + Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRIEGMLRDYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + + +A +V +I Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238 >gi|163802428|ref|ZP_02196321.1| NTPase [Vibrio sp. AND4] gi|159173729|gb|EDP58544.1| NTPase [Vibrio sp. AND4] Length = 242 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 17/240 (7%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 T+ +AV L G + + V DV E+Y A L+ N+ A E Sbjct: 5 TLIGLLAVSLLFGCASKE------EIVPDVP-PSELYADAQTSLQSGNWLSAIEKLEALD 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +PF + + L + Y + ++ P + +D+V Y+ G+S+ Sbjct: 58 SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQ 117 Query: 145 IRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 R+ +D K +++ERY +SPY + ++ + +N+LA ++ Sbjct: 118 DRNFMHDLFNVDRSDRDPEPVKKAFGDFKKLLERYPSSPYAEDSQRRMVALKNRLANYDL 177 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +YL+R ++AAI R Q + + D E A +++ +EAY L L D +LI+ Sbjct: 178 ATADFYLRREAWIAAINRSQELQKAFPDTEAARKSLEIQLEAYKQLKLDDAVARTEALIK 237 >gi|212636675|ref|YP_002313200.1| hypothetical protein swp_3941 [Shewanella piezotolerans WP3] gi|212558159|gb|ACJ30613.1| Conserved hypothetical protein [Shewanella piezotolerans WP3] Length = 276 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 10/211 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A ++ N+SKA FPF + L F Y + + Sbjct: 60 LYSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIFAYYKLDDPASGIANIDR 119 Query: 120 YITQYPESKNVDYVYYLVGMSYAQ----MIRDV------PYDQRATKLMLQYMSRIVERY 169 +I P K++DYVYY+ G+ Q + D+ D +A + + R+V+ Y Sbjct: 120 FIRLNPTHKDIDYVYYMRGLVNMQSDRYLFHDMLNIDRSDRDPKAAQDAFKDFDRLVKAY 179 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 NS Y A+ + +N+LA +++ YY+K + AA R QLV+ + E A Sbjct: 180 PNSKYAADAQKRMQHLKNRLALYSIKVAEYYIKMNAWSAAAIRAQLVMEGFPGTPSTERA 239 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + +AY L + ++Q +P Sbjct: 240 LEIMSQAYGELGQDKLKEHTLMVMQANFPDN 270 >gi|15617006|ref|NP_240219.1| hypothetical protein BU402 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681758|ref|YP_002468144.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682313|ref|YP_002468697.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471460|ref|ZP_05635459.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|18202269|sp|P57482|Y402_BUCAI RecName: Full=UPF0169 protein BU402 gi|25403614|pir||A84977 hypothetical protein [imported] - Buchnera sp. (strain APS) gi|10039071|dbj|BAB13105.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219622046|gb|ACL30202.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624601|gb|ACL30756.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086139|gb|ADP66221.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086712|gb|ADP66793.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087297|gb|ADP67377.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087808|gb|ADP67887.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 246 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 19/209 (9%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS-AFVQYSAGKYQQAASLGE 118 +YEK+ L+++NF A + ++ A ++ + + + Y + QA E Sbjct: 36 LYEKSNKELRKENFDNAISILEKIKKNNNTANISNDKIQIDLIYAYYKILNFDQARKNIE 95 Query: 119 EYITQYPESKNVDYVYY---LVGMSYAQM-----------IRDVPYDQRATKLMLQYMSR 164 E++ YP N+DYV Y L+ MS + D Y + A L+Y Sbjct: 96 EFMYFYPNHPNIDYVVYIQCLISMSLDKNRFFSVFPINYYKNDYFYAKNAF-FQLKYF-- 152 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + +Y S YV A+ + +N+L+ ++ I ++Y EY+A I R + +L YS+ Sbjct: 153 -IYQYPKSRYVVNAKKNLIYIKNRLSEHDLSILKFYFFHKEYIAVINRGEEMLQRYSETP 211 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLI 253 A +A+ + ++Y AL + D A+++ +I Sbjct: 212 SARKALIYIEKSYYALKIFDTAKKISKII 240 >gi|332876322|ref|ZP_08444095.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii 6014059] gi|322507011|gb|ADX02465.1| Putative competence protein [Acinetobacter baumannii 1656-2] gi|323516879|gb|ADX91260.1| DNA uptake lipoprotein [Acinetobacter baumannii TCDC-AB0715] gi|332735473|gb|EGJ66527.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii 6014059] Length = 376 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 22/250 (8%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + +A F VG S+ +D+ Q ++KA L + A + Sbjct: 2 LALSLGVASAF-VGCSSNPSKKEVVDTGPQSSEQ-AYFDKAQKALDRGQYLDATKSLEAI 59 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ G+S + Sbjct: 60 DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNME 119 Query: 144 MI--------------RDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188 M RDV Y K+ Q ++ R+ +S Y V A+ +G+ + Sbjct: 120 MNYDSLLRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 174 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++ Sbjct: 175 LAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQ 234 Query: 249 VVSLIQERYP 258 + +++ YP Sbjct: 235 YIEVLKLNYP 244 >gi|218547882|ref|YP_002381673.1| outer membrane protein assembly complex subunit YfiO [Escherichia fergusonii ATCC 35469] gi|218355423|emb|CAQ88031.1| putative lipoprotein [Escherichia fergusonii ATCC 35469] gi|324111236|gb|EGC05218.1| outer membrane assembly lipoprotein YfiO [Escherichia fergusonii B253] gi|325496331|gb|EGC94190.1| outer membrane protein assembly complex subunit YfiO [Escherichia fergusonii ECD227] Length = 245 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 46/206 (22%), Positives = 89/206 (43%), Gaps = 10/206 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E+Y A L++ N+ +A +PF +++ L + Y A + Sbjct: 33 NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167 + +I P N+DYV Y+ G++ + + D + + S++V Sbjct: 93 DRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVR 152 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y NS Y A + +++LA E + YY +RG +VA + R + +L +Y D + Sbjct: 153 GYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATR 212 Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253 +A+ + AY + + +A +V +I Sbjct: 213 DALPLMENAYRQMQMNAQAEKVAKII 238 >gi|184157113|ref|YP_001845452.1| DNA uptake lipoprotein [Acinetobacter baumannii ACICU] gi|183208707|gb|ACC56105.1| DNA uptake lipoprotein [Acinetobacter baumannii ACICU] Length = 385 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 22/250 (8%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + +A F VG S+ +D+ Q ++KA L + A + Sbjct: 11 LALSLGVASAF-VGCSSNPSKKEVVDTGPQSSEQ-AYFDKAQKALDRGQYLDATKSLEAI 68 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ G+S + Sbjct: 69 DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNME 128 Query: 144 MI--------------RDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188 M RDV Y K+ Q ++ R+ +S Y V A+ +G+ + Sbjct: 129 MNYDSLLRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 183 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++ Sbjct: 184 LAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQ 243 Query: 249 VVSLIQERYP 258 + +++ YP Sbjct: 244 YIEVLKLNYP 253 >gi|261342025|ref|ZP_05969883.1| competence lipoprotein ComL [Enterobacter cancerogenus ATCC 35316] gi|288315681|gb|EFC54619.1| competence lipoprotein ComL [Enterobacter cancerogenus ATCC 35316] Length = 245 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 44/205 (21%), Positives = 89/205 (43%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQATID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 ++ P N+DYV Y+ G++ + + D + + S++V Sbjct: 94 RFMRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y+ A + +++LA E + YY +RG +VA + R + +L +Y D + + Sbjct: 154 YPNSQYITDATKRLVFLKDRLAKYEYSVAEYYTRRGAWVAVVNRVEGMLRDYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 + + AY + + +A +V +I Sbjct: 214 GLKLMENAYRQMQMTGQAEKVAKII 238 >gi|170765615|ref|ZP_02900426.1| outer membrane assembly lipoprotein YfiO [Escherichia albertii TW07627] gi|170124761|gb|EDS93692.1| outer membrane assembly lipoprotein YfiO [Escherichia albertii TW07627] Length = 245 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P N+DYV Y+ G++ + + D + + S++V Sbjct: 94 RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA E + YY +RG +VA + R + +L +Y D + + Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + + +A +V +I Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238 >gi|156932862|ref|YP_001436778.1| outer membrane protein assembly complex subunit YfiO [Cronobacter sakazakii ATCC BAA-894] gi|156531116|gb|ABU75942.1| hypothetical protein ESA_00659 [Cronobacter sakazakii ATCC BAA-894] Length = 245 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWKAAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P N+DYV Y+ G++ + + D + + + S++V Sbjct: 94 RFIRLNPTHPNIDYVIYMRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFRDFSKLVRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y S Y A + +++L+ E+ + +YY KRG +VA + R + +L +Y D + E Sbjct: 154 YPQSQYATDATKRLVYLKDRLSKYELSVAQYYTKRGAWVAVVNRVEGMLRDYPDTQATHE 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 + + AY L L +A +V +I Sbjct: 214 GLGLMENAYRELQLNAQADKVAKII 238 >gi|86148439|ref|ZP_01066730.1| DNA uptake lipoprotein [Vibrio sp. MED222] gi|218708593|ref|YP_002416214.1| hypothetical lipoprotein [Vibrio splendidus LGP32] gi|85833793|gb|EAQ51960.1| DNA uptake lipoprotein [Vibrio sp. MED222] gi|218321612|emb|CAV17564.1| Hypothetical lipoprotein [Vibrio splendidus LGP32] Length = 242 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 58/241 (24%), Positives = 101/241 (41%), Gaps = 17/241 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LT+ +AV LVG SS ++ D V +Y A L+ ++ A E Sbjct: 4 LTLTGLLAVSLLVGC--SSSEEIVPDVPPSV-----LYSDAQESLQSGSWLSAIEKLEAL 56 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF + + L + Y + ++ P + D+V Y+ G+++ Sbjct: 57 DSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFLRLNPTHEKQDWVLYMRGLTHMA 116 Query: 144 MIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 R+ +D KL R++ER+ SPY + A+ + +N+LA + Sbjct: 117 QDRNFMHDIFNIDRSDRDPEPVKLAFADFKRLLERFPASPYAEDAQKRMFALKNRLAEYD 176 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +YL+R ++AAI R Q + Y D A +++ +EAY L L D LI Sbjct: 177 LATADFYLRREAWIAAINRTQELQKTYPDTIAARKSLDIQLEAYEQLGLEDAVLRTEKLI 236 Query: 254 Q 254 + Sbjct: 237 E 237 >gi|323963905|gb|EGB59398.1| outer membrane assembly lipoprotein YfiO [Escherichia coli M863] gi|327252301|gb|EGE63973.1| outer membrane assembly lipoprotein YfiO [Escherichia coli STEC_7v] Length = 245 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P N+DYV Y+ G++ + + D + + S++V Sbjct: 94 RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA E + YY +RG +VA + R + +L +Y D + + Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEDMLRDYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + + +A +V +I Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238 >gi|110642758|ref|YP_670488.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli 536] gi|191174570|ref|ZP_03036065.1| outer membrane assembly lipoprotein YfiO [Escherichia coli F11] gi|300976567|ref|ZP_07173519.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 200-1] gi|110344350|gb|ABG70587.1| hypothetical lipoprotein YfiO precursor [Escherichia coli 536] gi|190905143|gb|EDV64787.1| outer membrane assembly lipoprotein YfiO [Escherichia coli F11] gi|300308509|gb|EFJ63029.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 200-1] gi|324012461|gb|EGB81680.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 60-1] Length = 245 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P N+DYV Y+ G++ + + D + + S++V Sbjct: 94 RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQRFFGVDRSDRDPQHARAAFSDFSKLVRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA E + YY +RG +VA + R + +L +Y D + + Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + + +A +V +I Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238 >gi|15803119|ref|NP_289150.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli O157:H7 EDL933] gi|15832712|ref|NP_311485.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli O157:H7 str. Sakai] gi|16130516|ref|NP_417086.1| lipoprotein required for OM biogenesis, in BamABCD complex [Escherichia coli str. K-12 substr. MG1655] gi|26248958|ref|NP_754998.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli CFT073] gi|74313154|ref|YP_311573.1| outer membrane protein assembly complex subunit YfiO [Shigella sonnei Ss046] gi|89109397|ref|AP_003177.1| predicted lipoprotein [Escherichia coli str. K-12 substr. W3110] gi|91211929|ref|YP_541915.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli UTI89] gi|117624819|ref|YP_853732.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli APEC O1] gi|157155227|ref|YP_001463916.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli E24377A] gi|157162071|ref|YP_001459389.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli HS] gi|168752064|ref|ZP_02777086.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4113] gi|168758665|ref|ZP_02783672.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4401] gi|168762388|ref|ZP_02787395.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4501] gi|168771701|ref|ZP_02796708.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4486] gi|168773477|ref|ZP_02798484.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4196] gi|168789498|ref|ZP_02814505.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC869] gi|168801713|ref|ZP_02826720.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC508] gi|170019126|ref|YP_001724080.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli ATCC 8739] gi|170082200|ref|YP_001731520.1| lipoprotein [Escherichia coli str. K-12 substr. DH10B] gi|170682905|ref|YP_001744780.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli SMS-3-5] gi|187732232|ref|YP_001881383.1| outer membrane protein assembly complex subunit YfiO [Shigella boydii CDC 3083-94] gi|188492325|ref|ZP_02999595.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 53638] gi|191169057|ref|ZP_03030820.1| outer membrane assembly lipoprotein YfiO [Escherichia coli B7A] gi|193064045|ref|ZP_03045130.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E22] gi|193071696|ref|ZP_03052597.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E110019] gi|194430166|ref|ZP_03062667.1| outer membrane assembly lipoprotein YfiO [Escherichia coli B171] gi|194439383|ref|ZP_03071461.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 101-1] gi|195940190|ref|ZP_03085572.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli O157:H7 str. EC4024] gi|208807425|ref|ZP_03249762.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4206] gi|208813580|ref|ZP_03254909.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4045] gi|208818633|ref|ZP_03258953.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4042] gi|209395708|ref|YP_002272068.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4115] gi|209920072|ref|YP_002294156.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli SE11] gi|215487934|ref|YP_002330365.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli O127:H6 str. E2348/69] gi|217327021|ref|ZP_03443104.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. TW14588] gi|218555175|ref|YP_002388088.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli IAI1] gi|218559516|ref|YP_002392429.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli S88] gi|218690714|ref|YP_002398926.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli ED1a] gi|218696220|ref|YP_002403887.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli 55989] gi|218701107|ref|YP_002408736.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli IAI39] gi|218706097|ref|YP_002413616.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli UMN026] gi|227888162|ref|ZP_04005967.1| DNA uptake lipoprotein ComL [Escherichia coli 83972] gi|237706816|ref|ZP_04537297.1| outer membrane protein assembly complex subunit YfiO [Escherichia sp. 3_2_53FAA] gi|238901756|ref|YP_002927552.1| putative lipoprotein [Escherichia coli BW2952] gi|253772509|ref|YP_003035340.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254037672|ref|ZP_04871730.1| outer membrane assembly lipoprotein YfiO [Escherichia sp. 1_1_43] gi|254162566|ref|YP_003045674.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli B str. REL606] gi|254794543|ref|YP_003079380.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli O157:H7 str. TW14359] gi|256019584|ref|ZP_05433449.1| outer membrane protein assembly complex subunit YfiO [Shigella sp. D9] gi|256024876|ref|ZP_05438741.1| outer membrane protein assembly complex subunit YfiO [Escherichia sp. 4_1_40B] gi|260845277|ref|YP_003223055.1| putative lipoprotein [Escherichia coli O103:H2 str. 12009] gi|260856685|ref|YP_003230576.1| putative lipoprotein [Escherichia coli O26:H11 str. 11368] gi|260869277|ref|YP_003235679.1| putative lipoprotein [Escherichia coli O111:H- str. 11128] gi|261227480|ref|ZP_05941761.1| Lipoprotein required for outer membrane biogenesis [Escherichia coli O157:H7 str. FRIK2000] gi|261255674|ref|ZP_05948207.1| putative lipoprotein [Escherichia coli O157:H7 str. FRIK966] gi|291283868|ref|YP_003500686.1| putative lipoprotein [Escherichia coli O55:H7 str. CB9615] gi|293406105|ref|ZP_06650031.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli FVEC1412] gi|293415868|ref|ZP_06658508.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli B185] gi|297516263|ref|ZP_06934649.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli OP50] gi|298381837|ref|ZP_06991434.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli FVEC1302] gi|300819931|ref|ZP_07100114.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 107-1] gi|300825128|ref|ZP_07105221.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 119-7] gi|300900219|ref|ZP_07118405.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 198-1] gi|300905085|ref|ZP_07122892.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 84-1] gi|300921139|ref|ZP_07137520.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 115-1] gi|300922521|ref|ZP_07138630.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 182-1] gi|300930680|ref|ZP_07146064.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 187-1] gi|300940368|ref|ZP_07154956.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 21-1] gi|300948989|ref|ZP_07163045.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 116-1] gi|300957378|ref|ZP_07169595.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 175-1] gi|300986848|ref|ZP_07177831.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 45-1] gi|301024187|ref|ZP_07187894.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 196-1] gi|301026355|ref|ZP_07189803.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 69-1] gi|301050464|ref|ZP_07197346.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 185-1] gi|301305759|ref|ZP_07211846.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 124-1] gi|301326711|ref|ZP_07220029.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 78-1] gi|301644037|ref|ZP_07244055.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 146-1] gi|306812485|ref|ZP_07446683.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli NC101] gi|307139316|ref|ZP_07498672.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli H736] gi|307315091|ref|ZP_07594675.1| outer membrane assembly lipoprotein YfiO [Escherichia coli W] gi|309794108|ref|ZP_07688532.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 145-7] gi|312965510|ref|ZP_07779742.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|312973161|ref|ZP_07787334.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|331643312|ref|ZP_08344443.1| putative lipoprotein [Escherichia coli H736] gi|331648339|ref|ZP_08349427.1| putative lipoprotein [Escherichia coli M605] gi|331654055|ref|ZP_08355055.1| putative lipoprotein [Escherichia coli M718] gi|331658745|ref|ZP_08359687.1| putative lipoprotein [Escherichia coli TA206] gi|331669347|ref|ZP_08370193.1| putative lipoprotein [Escherichia coli TA271] gi|331674038|ref|ZP_08374800.1| putative lipoprotein [Escherichia coli TA280] gi|331678589|ref|ZP_08379263.1| putative lipoprotein [Escherichia coli H591] gi|332280709|ref|ZP_08393122.1| lipoprotein [Shigella sp. D9] gi|81170861|sp|P0AC04|YFIO_ECO57 RecName: Full=UPF0169 lipoprotein yfiO; Flags: Precursor gi|81170862|sp|P0AC03|YFIO_ECOL6 RecName: Full=UPF0169 lipoprotein yfiO; Flags: Precursor gi|81170863|sp|P0AC02|YFIO_ECOLI RecName: Full=UPF0169 lipoprotein yfiO; Flags: Precursor gi|12517019|gb|AAG57708.1|AE005490_3 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|26109364|gb|AAN81566.1|AE016764_248 Hypothetical lipoprotein yfiO precursor [Escherichia coli CFT073] gi|1788947|gb|AAC75644.1| lipoprotein required for OM biogenesis, in BamABCD complex [Escherichia coli str. K-12 substr. MG1655] gi|1799999|dbj|BAA16480.1| predicted lipoprotein [Escherichia coli str. K12 substr. W3110] gi|13362929|dbj|BAB36881.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|73856631|gb|AAZ89338.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|91073503|gb|ABE08384.1| hypothetical protein UTI89_C2928 [Escherichia coli UTI89] gi|115513943|gb|ABJ02018.1| putative lipoprotein [Escherichia coli APEC O1] gi|157067751|gb|ABV07006.1| outer membrane assembly lipoprotein YfiO [Escherichia coli HS] gi|157077257|gb|ABV16965.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E24377A] gi|169754054|gb|ACA76753.1| conserved hypothetical protein [Escherichia coli ATCC 8739] gi|169890035|gb|ACB03742.1| predicted lipoprotein [Escherichia coli str. K-12 substr. DH10B] gi|170520623|gb|ACB18801.1| outer membrane assembly lipoprotein YfiO [Escherichia coli SMS-3-5] gi|187429224|gb|ACD08498.1| outer membrane assembly lipoprotein YfiO [Shigella boydii CDC 3083-94] gi|187770689|gb|EDU34533.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4196] gi|188013996|gb|EDU52118.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4113] gi|188487524|gb|EDU62627.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 53638] gi|189354558|gb|EDU72977.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4401] gi|189359602|gb|EDU78021.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4486] gi|189367289|gb|EDU85705.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4501] gi|189370903|gb|EDU89319.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC869] gi|189376189|gb|EDU94605.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC508] gi|190900898|gb|EDV60684.1| outer membrane assembly lipoprotein YfiO [Escherichia coli B7A] gi|192929280|gb|EDV82889.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E22] gi|192954991|gb|EDV85493.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E110019] gi|194411791|gb|EDX28112.1| outer membrane assembly lipoprotein YfiO [Escherichia coli B171] gi|194421745|gb|EDX37754.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 101-1] gi|208727226|gb|EDZ76827.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4206] gi|208734857|gb|EDZ83544.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4045] gi|208738756|gb|EDZ86438.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4042] gi|209157108|gb|ACI34541.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4115] gi|209762668|gb|ACI79646.1| hypothetical protein ECs3458 [Escherichia coli] gi|209762670|gb|ACI79647.1| hypothetical protein ECs3458 [Escherichia coli] gi|209762672|gb|ACI79648.1| hypothetical protein ECs3458 [Escherichia coli] gi|209762674|gb|ACI79649.1| hypothetical protein ECs3458 [Escherichia coli] gi|209762676|gb|ACI79650.1| hypothetical protein ECs3458 [Escherichia coli] gi|209913331|dbj|BAG78405.1| putative lipoprotein [Escherichia coli SE11] gi|215266006|emb|CAS10417.1| predicted lipoprotein [Escherichia coli O127:H6 str. E2348/69] gi|217319388|gb|EEC27813.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. TW14588] gi|218352952|emb|CAU98751.1| putative lipoprotein [Escherichia coli 55989] gi|218361943|emb|CAQ99545.1| putative lipoprotein [Escherichia coli IAI1] gi|218366285|emb|CAR04037.1| putative lipoprotein [Escherichia coli S88] gi|218371093|emb|CAR18922.1| putative lipoprotein [Escherichia coli IAI39] gi|218428278|emb|CAR09056.1| putative lipoprotein [Escherichia coli ED1a] gi|218433194|emb|CAR14093.1| putative lipoprotein [Escherichia coli UMN026] gi|226839296|gb|EEH71317.1| outer membrane assembly lipoprotein YfiO [Escherichia sp. 1_1_43] gi|226899856|gb|EEH86115.1| outer membrane protein assembly complex subunit YfiO [Escherichia sp. 3_2_53FAA] gi|227834802|gb|EEJ45268.1| DNA uptake lipoprotein ComL [Escherichia coli 83972] gi|238862627|gb|ACR64625.1| predicted lipoprotein [Escherichia coli BW2952] gi|242378191|emb|CAQ32966.1| BamD, subunit of Outer Membrane Protein Assembly Complex [Escherichia coli BL21(DE3)] gi|253323553|gb|ACT28155.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974467|gb|ACT40138.1| predicted lipoprotein [Escherichia coli B str. REL606] gi|253978634|gb|ACT44304.1| predicted lipoprotein [Escherichia coli BL21(DE3)] gi|254593943|gb|ACT73304.1| Lipoprotein required for outer membrane biogenesis [Escherichia coli O157:H7 str. TW14359] gi|257755334|dbj|BAI26836.1| predicted lipoprotein [Escherichia coli O26:H11 str. 11368] gi|257760424|dbj|BAI31921.1| predicted lipoprotein [Escherichia coli O103:H2 str. 12009] gi|257765633|dbj|BAI37128.1| predicted lipoprotein [Escherichia coli O111:H- str. 11128] gi|260448329|gb|ACX38751.1| outer membrane assembly lipoprotein YfiO [Escherichia coli DH1] gi|281179643|dbj|BAI55973.1| putative lipoprotein [Escherichia coli SE15] gi|284922543|emb|CBG35630.1| putative lipoprotein [Escherichia coli 042] gi|290763741|gb|ADD57702.1| predicted lipoprotein [Escherichia coli O55:H7 str. CB9615] gi|291426111|gb|EFE99143.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli FVEC1412] gi|291432057|gb|EFF05039.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli B185] gi|294489858|gb|ADE88614.1| outer membrane assembly lipoprotein YfiO [Escherichia coli IHE3034] gi|298276977|gb|EFI18493.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli FVEC1302] gi|299880529|gb|EFI88740.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 196-1] gi|300297835|gb|EFJ54220.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 185-1] gi|300315881|gb|EFJ65665.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 175-1] gi|300356254|gb|EFJ72124.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 198-1] gi|300395570|gb|EFJ79108.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 69-1] gi|300403012|gb|EFJ86550.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 84-1] gi|300407858|gb|EFJ91396.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 45-1] gi|300411912|gb|EFJ95222.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 115-1] gi|300421133|gb|EFK04444.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 182-1] gi|300451546|gb|EFK15166.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 116-1] gi|300454822|gb|EFK18315.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 21-1] gi|300461454|gb|EFK24947.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 187-1] gi|300522400|gb|EFK43469.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 119-7] gi|300527519|gb|EFK48581.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 107-1] gi|300839013|gb|EFK66773.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 124-1] gi|300846634|gb|EFK74394.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 78-1] gi|301077611|gb|EFK92417.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 146-1] gi|305854523|gb|EFM54961.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli NC101] gi|306905520|gb|EFN36054.1| outer membrane assembly lipoprotein YfiO [Escherichia coli W] gi|307554610|gb|ADN47385.1| outer membrane assembly lipoprotein YfiO [Escherichia coli ABU 83972] gi|307625853|gb|ADN70157.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli UM146] gi|308122013|gb|EFO59275.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 145-7] gi|309702977|emb|CBJ02308.1| putative lipoprotein [Escherichia coli ETEC H10407] gi|310333103|gb|EFQ00317.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|312289930|gb|EFR17818.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|312947169|gb|ADR27996.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli O83:H1 str. NRG 857C] gi|315061910|gb|ADT76237.1| predicted lipoprotein [Escherichia coli W] gi|315137215|dbj|BAJ44374.1| putative lipoprotein [Escherichia coli DH1] gi|315253123|gb|EFU33091.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 85-1] gi|315284806|gb|EFU44251.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 110-3] gi|315290936|gb|EFU50301.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 153-1] gi|315298637|gb|EFU57892.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 16-3] gi|315615336|gb|EFU95970.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 3431] gi|320177088|gb|EFW52105.1| outer membrane protein assembly complex subunit YfiO [Shigella dysenteriae CDC 74-1112] gi|320185009|gb|EFW59791.1| outer membrane protein assembly complex subunit YfiO [Shigella flexneri CDC 796-83] gi|320188932|gb|EFW63591.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli O157:H7 str. EC1212] gi|320194760|gb|EFW69389.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli WV_060327] gi|320198370|gb|EFW72972.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli EC4100B] gi|320640779|gb|EFX10277.1| outer membrane biogenesis protein BamD [Escherichia coli O157:H7 str. G5101] gi|320646124|gb|EFX15069.1| outer membrane biogenesis protein BamD [Escherichia coli O157:H- str. 493-89] gi|320651421|gb|EFX19822.1| outer membrane biogenesis protein BamD [Escherichia coli O157:H- str. H 2687] gi|320657026|gb|EFX24849.1| outer membrane biogenesis protein BamD [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662690|gb|EFX30034.1| outer membrane biogenesis protein BamD [Escherichia coli O55:H7 str. USDA 5905] gi|320667507|gb|EFX34431.1| outer membrane biogenesis protein BamD [Escherichia coli O157:H7 str. LSU-61] gi|323156251|gb|EFZ42410.1| outer membrane assembly lipoprotein YfiO [Escherichia coli EPECa14] gi|323167769|gb|EFZ53464.1| outer membrane assembly lipoprotein YfiO [Shigella sonnei 53G] gi|323173089|gb|EFZ58720.1| outer membrane assembly lipoprotein YfiO [Escherichia coli LT-68] gi|323177277|gb|EFZ62865.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 1180] gi|323184528|gb|EFZ69902.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 1357] gi|323188382|gb|EFZ73673.1| outer membrane assembly lipoprotein YfiO [Escherichia coli RN587/1] gi|323377509|gb|ADX49777.1| outer membrane assembly lipoprotein YfiO [Escherichia coli KO11] gi|323935609|gb|EGB31929.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E1520] gi|323941385|gb|EGB37569.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E482] gi|323946276|gb|EGB42309.1| outer membrane assembly lipoprotein YfiO [Escherichia coli H120] gi|323957036|gb|EGB52762.1| outer membrane assembly lipoprotein YfiO [Escherichia coli H263] gi|323960545|gb|EGB56174.1| outer membrane assembly lipoprotein YfiO [Escherichia coli H489] gi|323971460|gb|EGB66696.1| outer membrane assembly lipoprotein YfiO [Escherichia coli TA007] gi|323978452|gb|EGB73536.1| outer membrane assembly lipoprotein YfiO [Escherichia coli TW10509] gi|324005835|gb|EGB75054.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 57-2] gi|324016578|gb|EGB85797.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 117-3] gi|324120054|gb|EGC13930.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E1167] gi|326344349|gb|EGD68107.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli O157:H7 str. 1125] gi|326347718|gb|EGD71435.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli O157:H7 str. 1044] gi|330912360|gb|EGH40870.1| putative component of the lipoprotein assembly complex [Escherichia coli AA86] gi|331036783|gb|EGI09007.1| putative lipoprotein [Escherichia coli H736] gi|331042086|gb|EGI14228.1| putative lipoprotein [Escherichia coli M605] gi|331047437|gb|EGI19514.1| putative lipoprotein [Escherichia coli M718] gi|331053327|gb|EGI25356.1| putative lipoprotein [Escherichia coli TA206] gi|331063015|gb|EGI34928.1| putative lipoprotein [Escherichia coli TA271] gi|331068777|gb|EGI40170.1| putative lipoprotein [Escherichia coli TA280] gi|331073419|gb|EGI44740.1| putative lipoprotein [Escherichia coli H591] gi|332103061|gb|EGJ06407.1| lipoprotein [Shigella sp. D9] gi|332344466|gb|AEE57800.1| conserved hypothetical protein [Escherichia coli UMNK88] gi|332999361|gb|EGK18946.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri VA-6] gi|333001155|gb|EGK20725.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-272] gi|333015793|gb|EGK35130.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-227] Length = 245 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P N+DYV Y+ G++ + + D + + S++V Sbjct: 94 RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA E + YY +RG +VA + R + +L +Y D + + Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + + +A +V +I Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238 >gi|332088104|gb|EGI93229.1| outer membrane assembly lipoprotein YfiO [Shigella boydii 5216-82] Length = 245 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P N+DYV Y+ G++ + + D + + S++V Sbjct: 94 RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA E + YY +RG +VA + R + +L +Y D + + Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + + +A +V +I Sbjct: 214 ALPLMENAYRQMQINAQAEKVAKII 238 >gi|148244619|ref|YP_001219313.1| competence lipoprotein ComL [Candidatus Vesicomyosocius okutanii HA] gi|146326446|dbj|BAF61589.1| competence lipoprotein ComL [Candidatus Vesicomyosocius okutanii HA] Length = 255 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 19/248 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN----FSKAYEY 79 L I V L G Q +++ ++S+T + + +A KEQ +KA + Sbjct: 4 LFIILPFLVLLLNGCSWQ--KEIKIESITKGWSPKTFFTQA----KEQESLGLTNKAIKL 57 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F Q +P + A +S L A+ Y Y QA YI YPE + Y YYL G+ Sbjct: 58 FEQLQATYPGSKYALQSKLEIAYALYKNKDYDQAIYHLNNYIKFYPEHFSTPYAYYLRGV 117 Query: 140 SYAQMIRDVPYD------QRATKLM---LQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 R D QR+ + Y +++++ + Y + + RN L+ Sbjct: 118 ISQDKSRSFLDDYFTDSAQRSVNSVRNAFNYYLALIDKFPKTKYTEDTITRLVALRNILS 177 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 E+ I YY K+G +AAI R + ++ Y + A+ + Y A+ A++ Sbjct: 178 RHELFIAIYYTKKGANIAAINRTKFIVEKYQNTPSVPAALHLMATNYDAINAGTLAKDTR 237 Query: 251 SLIQERYP 258 ++++ YP Sbjct: 238 RVLEKNYP 245 >gi|308187866|ref|YP_003931997.1| UPF0169 lipoprotein yfiO precursor [Pantoea vagans C9-1] gi|308058376|gb|ADO10548.1| putative UPF0169 lipoprotein yfiO precursor [Pantoea vagans C9-1] Length = 274 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 17/229 (7%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94 LVG S D DS E+Y A L++ NF A + +PF ++ Sbjct: 48 LVGCS--GSNDAVPDSPP-----SEIYATAQQKLQDGNFKAAIKQLEALDNRYPFGPYSQ 100 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---------- 144 + L + Y A + ++ P N+DYV Y+ G++ + Sbjct: 101 QVQLDLIYAYYKNADLPLAQAAIARFMRLNPTHPNIDYVIYMKGLTDMALDDSALQGFFG 160 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 I D + + S+++ Y NS Y A+ + +++LA E+ + ++Y KR Sbjct: 161 IDRSDRDPTHARDAFRDFSQLLRSYPNSQYAADAQKRLVYLKDRLAKYELSVAQFYTKRE 220 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 YVA + R + ++ +Y D + +A+ + AY L L EA +V +I Sbjct: 221 AYVAVVNRVEGMMRDYPDTQATHDALPLMENAYRNLQLNAEADKVAKII 269 >gi|283835693|ref|ZP_06355434.1| competence lipoprotein ComL [Citrobacter youngae ATCC 29220] gi|291068910|gb|EFE07019.1| competence lipoprotein ComL [Citrobacter youngae ATCC 29220] Length = 245 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 10/206 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E+Y A L++ N+ +A +PF +++ L + Y A + Sbjct: 33 NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167 + +I P N+DYV Y+ G++ + + D + + S++V Sbjct: 93 DRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVR 152 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y NS Y A + +++LA E + YY RG +VA + R + +L +Y D + Sbjct: 153 GYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRDYPDTQATR 212 Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253 +A+ + AY + + +A +V +I Sbjct: 213 DALPLMENAYRQMQMNAQAEKVAKII 238 >gi|296104264|ref|YP_003614410.1| putative lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058723|gb|ADF63461.1| putative lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 245 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 45/205 (21%), Positives = 89/205 (43%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQATID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 ++ P N+DYV Y+ G++ + + D + + S++V Sbjct: 94 RFMRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS YV A + +++LA E + YY +RG +VA + R + +L +Y D + + Sbjct: 154 YPNSQYVTDATKRLVFLKDRLAKYEYSVAEYYTRRGAWVAVVNRVEGMLRDYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 + + AY + + +A +V +I Sbjct: 214 GLKLMENAYRQMQMTAQADKVAKII 238 >gi|157148107|ref|YP_001455426.1| outer membrane protein assembly complex subunit YfiO [Citrobacter koseri ATCC BAA-895] gi|157085312|gb|ABV14990.1| hypothetical protein CKO_03917 [Citrobacter koseri ATCC BAA-895] Length = 245 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 45/205 (21%), Positives = 88/205 (42%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P N+DYV Y+ G++ + + D + + S++V Sbjct: 94 RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRS 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA E + YY RG +VA + R + +L ++ D + + Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVADYYTARGAWVAVVNRVEGMLRDFPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + + +A +V +I Sbjct: 214 ALPLMENAYRQMQMTTQADKVAKII 238 >gi|295097163|emb|CBK86253.1| outer membrane assembly lipoprotein YfiO [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 245 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 44/205 (21%), Positives = 89/205 (43%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQATID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 ++ P N+DYV Y+ G++ + + D + + S++V Sbjct: 94 RFMRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRS 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y+ A + +++LA E + YY +RG +VA + R + +L +Y D + + Sbjct: 154 YPNSQYITDATKRLVFLKDRLAKYEYSVAEYYTRRGAWVAVVNRVEGMLRDYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 + + AY + + +A +V +I Sbjct: 214 GLKLMENAYRQMQMTAQADKVAKII 238 >gi|89075040|ref|ZP_01161481.1| hypothetical protein SKA34_21630 [Photobacterium sp. SKA34] gi|89049127|gb|EAR54692.1| hypothetical protein SKA34_21630 [Photobacterium sp. SKA34] Length = 242 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 17/241 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LTI +AV L G SS++ D + DV +Y A L++ N++ A E Sbjct: 4 LTITTLLAVALLSGC---SSKE---DVIPDVP-PSNLYATAQTALQKGNWTSAIEQLEAL 56 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF + + L + Y + + E ++ P+ D+V Y+ G+++ Sbjct: 57 DSRYPFGAYSDQVQLDLIYAYYKSDDLALGEATIERFLRLNPDHPQADWVVYMRGLTHMA 116 Query: 144 MIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 R +D ++ + ++ERY S Y A+ + +N+LA + Sbjct: 117 QDRSFMHDMFNINRFDRDPTPSRQAFKDFKYLLERYPESEYSADAKTRMIFLKNRLANYD 176 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +Y++R ++AAI R Q + YSD E A +++A AY L L E L+ Sbjct: 177 LATVDFYIRREAWIAAINRCQQIQRLYSDTEAARQSLALEKTAYEKLNLQKEVERTDKLM 236 Query: 254 Q 254 + Sbjct: 237 K 237 >gi|258620373|ref|ZP_05715411.1| putative lipoprotein [Vibrio mimicus VM573] gi|258624746|ref|ZP_05719680.1| putative lipoprotein [Vibrio mimicus VM603] gi|262172217|ref|ZP_06039895.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio mimicus MB-451] gi|258583033|gb|EEW07848.1| putative lipoprotein [Vibrio mimicus VM603] gi|258587252|gb|EEW11963.1| putative lipoprotein [Vibrio mimicus VM573] gi|261893293|gb|EEY39279.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio mimicus MB-451] Length = 241 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 11/216 (5%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D V DV E+Y +A L+ + A E +PF + + L + Y Sbjct: 23 DVVPDVP-PSELYSEAQSALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKND 81 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLM 158 + E + P + +D+V Y+ G+++ R+ +D K Sbjct: 82 DLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNVDRSDRDPEPVKSA 141 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++++RY NSPY + A+ + +N+LA ++ +YL+R ++AAI R Q + Sbjct: 142 FADFKKLLQRYPNSPYAEDAQRRMYALKNRLAEYDLATADFYLRREAWIAAINRTQELQK 201 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 + D E A +A+ +EAY L + + L++ Sbjct: 202 TFPDTEAARKALDIQLEAYQQLGMTEAVERTEQLMK 237 >gi|304399172|ref|ZP_07381039.1| outer membrane assembly lipoprotein YfiO [Pantoea sp. aB] gi|304353226|gb|EFM17606.1| outer membrane assembly lipoprotein YfiO [Pantoea sp. aB] Length = 243 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 51/215 (23%), Positives = 94/215 (43%), Gaps = 11/215 (5%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D+V D E+Y A L++ NF A + +PF +++ L + Y Sbjct: 25 DAVPD-NPPSEIYATAQQKLQDGNFKAAIKQLEALDNRYPFGPYSQQVQLDLIYAYYKNA 83 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158 A + ++ P N+DYV Y+ G++ + I D + Sbjct: 84 DLPLAQAAIARFMRLNPTHPNIDYVIYMKGLTDMALDDSALQGFFGIDRSDRDPTHARDA 143 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + S+++ Y NS Y A+ + +++LA E+ + ++Y KR YVA + R + ++ Sbjct: 144 FRDFSQLLRNYPNSQYAADAQKRLVYLKDRLAKYELSVAQFYTKREAYVAVVNRVEGMMR 203 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +Y D + +A+ + AY L L EA +V +I Sbjct: 204 DYPDTQATHDALPLMENAYRNLQLNAEADKVAKII 238 >gi|152971445|ref|YP_001336554.1| outer membrane protein assembly complex subunit YfiO [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206576804|ref|YP_002237067.1| outer membrane assembly lipoprotein YfiO [Klebsiella pneumoniae 342] gi|238896041|ref|YP_002920777.1| outer membrane protein assembly complex subunit YfiO [Klebsiella pneumoniae NTUH-K2044] gi|262043839|ref|ZP_06016929.1| competence lipoprotein ComL [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|290510911|ref|ZP_06550280.1| lipoprotein [Klebsiella sp. 1_1_55] gi|330012969|ref|ZP_08307539.1| outer membrane assembly lipoprotein YfiO [Klebsiella sp. MS 92-3] gi|150956294|gb|ABR78324.1| putative lipoprotein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206565862|gb|ACI07638.1| outer membrane assembly lipoprotein YfiO [Klebsiella pneumoniae 342] gi|238548359|dbj|BAH64710.1| putative lipoprotein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259038809|gb|EEW39990.1| competence lipoprotein ComL [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|289775904|gb|EFD83903.1| lipoprotein [Klebsiella sp. 1_1_55] gi|328533635|gb|EGF60347.1| outer membrane assembly lipoprotein YfiO [Klebsiella sp. MS 92-3] Length = 245 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 45/206 (21%), Positives = 90/206 (43%), Gaps = 10/206 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E+Y A L++ N+ +A +PF +++ L + Y A + Sbjct: 33 NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167 + ++ P N+DYV Y+ G++ + + D + + S++V Sbjct: 93 DRFMRLNPTHPNIDYVIYMRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVR 152 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y NS Y A + +++LA E+ + YY RG +VA + R + ++ NY D + Sbjct: 153 GYPNSQYATDAYKRMVFLKDRLAKYELSVVDYYTDRGAWVAVVNRVEGMMRNYPDTQATR 212 Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253 +A+ ++ AY + + +A +V +I Sbjct: 213 DALPKMENAYRQMQMNAQADKVAKII 238 >gi|297180027|gb|ADI16252.1| DNA uptake lipoprotein [uncultured bacterium HF0010_16H03] Length = 245 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 30/252 (11%) Query: 20 YKFALTIFF--SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 +K L FF SI F+VG D + ++ Y+ A ++ +N+ A Sbjct: 3 HKLNLKFFFCLSITALFMVGCNS--------DGPEIEQPEKIYYDLAQKRIQSKNYIAAI 54 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E +PF A ++ + + + G+ A + E++I +P N+DY Y + Sbjct: 55 ESLQAIETRYPFGRYAEQAQIELIYAYFMNGENLAAHAAAEKFIRLHPRHPNIDYAYLMK 114 Query: 138 GMSYAQMIRDVPYDQRAT------------KLMLQYMSRIVERYTNS---PYVKGARFYV 182 G+S RD + R T K +S + R+ S PY K Y+ Sbjct: 115 GLS--SYTRDTSFLVRVTDTDIANRDITGAKESFAELSEFLTRFPESQYSPYAKQRNIYL 172 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 RN +A E+ YY+ G Y+AA+ R + V+ N ++ A+ L E+Y L Sbjct: 173 ---RNMIARNELSAADYYVSIGAYIAAVRRAKYVIENIPNSSENLRALVILKESYKNLGY 229 Query: 243 MDEAREVVSLIQ 254 ++ +V +I Sbjct: 230 LELYEDVERIID 241 >gi|288934029|ref|YP_003438088.1| outer membrane assembly lipoprotein YfiO [Klebsiella variicola At-22] gi|288888758|gb|ADC57076.1| outer membrane assembly lipoprotein YfiO [Klebsiella variicola At-22] Length = 245 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 45/206 (21%), Positives = 90/206 (43%), Gaps = 10/206 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E+Y A L++ N+ +A +PF +++ L + Y A + Sbjct: 33 NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167 + ++ P N+DYV Y+ G++ + + D + + S++V Sbjct: 93 DRFMRLNPTHPNIDYVIYMRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVR 152 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y NS Y A + +++LA E+ + YY RG +VA + R + ++ NY D + Sbjct: 153 GYPNSQYATDAFKRMVFLKDRLAKYELSVVDYYTDRGAWVAVVNRVEGMMRNYPDTQATR 212 Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253 +A+ ++ AY + + +A +V +I Sbjct: 213 DALPKMENAYRQMQMNAQADKVAKII 238 >gi|226953431|ref|ZP_03823895.1| DNA uptake lipoprotein-like protein [Acinetobacter sp. ATCC 27244] gi|294649579|ref|ZP_06726998.1| competence protein [Acinetobacter haemolyticus ATCC 19194] gi|226835814|gb|EEH68197.1| DNA uptake lipoprotein-like protein [Acinetobacter sp. ATCC 27244] gi|292824518|gb|EFF83302.1| competence protein [Acinetobacter haemolyticus ATCC 19194] Length = 329 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 24/252 (9%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQ 82 L + +A F VG S+ +D Q VY EKA+ L+ ++ A + Sbjct: 11 LALSLGVASAF-VGCSSNPSKKEVVDKGPQSSEQ--VYFEKALKSLERNQYTDAVKSLEA 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG---- 138 FP +++ L + ++ Y+ +L + +I P+ NVDY YY+ G Sbjct: 68 LDTYFPTGQYTQQAQLELLYAKFKQKDYEGTIALADRFIRLNPQHPNVDYAYYVRGVANM 127 Query: 139 -MSYAQMI---------RDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRN 187 M+Y +I RDV Y K+ Q ++ R+ +S Y V A+ +G+ Sbjct: 128 EMNYDSLIRYTSLKQAHRDVSY----IKVAYQNFVDLIRRFPSSQYSVDAAQRMKYIGQ- 182 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 +LA E+ R+ ++R ++AA R + VL Y EA+A L +Y L ++ Sbjct: 183 ELAESEMNAARFNIQRKAWLAAAERARWVLEYYPQTPQTPEALATLAYSYQQLGDKATSQ 242 Query: 248 EVVSLIQERYPQ 259 + + +++ YP Sbjct: 243 QYIEILKLNYPN 254 >gi|110806534|ref|YP_690054.1| outer membrane protein assembly complex subunit YfiO [Shigella flexneri 5 str. 8401] gi|110616082|gb|ABF04749.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] Length = 245 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P N+DYV Y+ G++ + + D + + S++V Sbjct: 94 RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + + +LA E + YY +RG +VA + R + +L +Y D + + Sbjct: 154 YPNSQYTTDATKRLVFLKGRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + + +A +V +I Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238 >gi|168239431|ref|ZP_02664489.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736160|ref|YP_002115674.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194711662|gb|ACF90883.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197287865|gb|EDY27253.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 245 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 10/206 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E+Y A L++ N+ +A +PF +++ L + Y A + Sbjct: 33 NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167 + ++ P N+DYV Y+ G++ + + D + + S++V Sbjct: 93 DRFMRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVR 152 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y +S Y A + +++LA E + YY RG +VA + R + +L NY D + Sbjct: 153 SYPHSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATR 212 Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253 +A+ + AY + L +A +V +I Sbjct: 213 DALPLMENAYRQMQLNAQADKVAKII 238 >gi|237729510|ref|ZP_04559991.1| outer membrane protein assembly complex subunit YfiO [Citrobacter sp. 30_2] gi|226908116|gb|EEH94034.1| outer membrane protein assembly complex subunit YfiO [Citrobacter sp. 30_2] Length = 245 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 10/206 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E+Y A L++ N+ +A +PF +++ L + Y A + Sbjct: 33 NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAI 92 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVE 167 + +I P N+DYV Y+ G++ + + D + + S++V Sbjct: 93 DRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVR 152 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y NS Y A + +++LA E + YY RG +VA + R + +L +Y D + Sbjct: 153 GYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRDYPDTQATR 212 Query: 228 EAMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + + +A +V +I Sbjct: 213 NALPLMENAYRQMQMNAQAEKVAKII 238 >gi|148978561|ref|ZP_01815013.1| putative lipoprotein [Vibrionales bacterium SWAT-3] gi|145962350|gb|EDK27631.1| putative lipoprotein [Vibrionales bacterium SWAT-3] Length = 242 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 56/241 (23%), Positives = 103/241 (42%), Gaps = 17/241 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LT+ +AV L G S+ ++ D V +Y +A L+ ++ A E Sbjct: 4 LTLAGLLAVSLLAGC--SSTEEIVPDVPPSV-----LYSEAQESLQSGSWLSAIEKLEAL 56 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF + + L + Y + ++ P + D+V Y+ G+++ Sbjct: 57 DSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFLRLNPTHEKQDWVLYMRGLTHMA 116 Query: 144 MIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 R+ +D KL R++ER+ SPY + A+ + +N+LA + Sbjct: 117 QDRNFMHDIFNIDRSDRDPEPVKLAFADFKRLLERFPASPYAEDAQKRMFALKNRLADYD 176 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +YL+R ++AAI R Q + Y D A +++ +EAY L L D + +LI Sbjct: 177 LATADFYLRREAWIAAINRTQELQKTYPDTIAARKSLKIQLEAYKQLGLEDAIQRTEALI 236 Query: 254 Q 254 + Sbjct: 237 E 237 >gi|260598976|ref|YP_003211547.1| outer membrane biogenesis protein BamD [Cronobacter turicensis z3032] gi|260218153|emb|CBA32978.1| UPF0169 lipoprotein yfiO [Cronobacter turicensis z3032] Length = 229 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ A +PF +++ L + Y A + + Sbjct: 18 EIYATAQQKLQDGNWKAAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 77 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P N+DYV Y+ G++ + + D + + + S++V Sbjct: 78 RFIRLNPTHPNIDYVIYMRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFRDFSKLVRG 137 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y S Y A + +++L+ E+ + +YY KRG +VA + R +L +Y D + E Sbjct: 138 YPQSQYSTDATKRLVYLKDRLSKYELSVAQYYTKRGAWVAVVNRVDGMLRDYPDTQATHE 197 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 + + AY L L +A +V +I Sbjct: 198 GLGLMENAYRELQLNAQADKVAKII 222 >gi|82545048|ref|YP_408995.1| outer membrane protein assembly complex subunit YfiO [Shigella boydii Sb227] gi|81246459|gb|ABB67167.1| conserved hypothetical protein [Shigella boydii Sb227] gi|332092137|gb|EGI97215.1| outer membrane assembly lipoprotein YfiO [Shigella boydii 3594-74] Length = 245 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 45/205 (21%), Positives = 89/205 (43%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P N+DYV Y+ G++ + + D + + S++V Sbjct: 94 RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA E + YY +RG +VA + R + +L +Y D + + Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + +Y + + +A +V +I Sbjct: 214 ALPLMENSYRQMQMNAQAEKVAKII 238 >gi|269101903|ref|ZP_06154600.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Photobacterium damselae subsp. damselae CIP 102761] gi|268161801|gb|EEZ40297.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Photobacterium damselae subsp. damselae CIP 102761] Length = 242 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 17/232 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LT+ +AV L G S+ +V V DV E+Y A L+ N+S+A E Sbjct: 4 LTLTTLLAVAILSGCS--STEEV----VPDVP-PSELYATAQESLQSGNWSQAIERLETL 56 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF + + L + Y + + ++ P + D+V Y++G+++ Sbjct: 57 DSRYPFGAYSDQVQLDLIYAYYKNDDLAMSEATINRFMRLNPINPKSDWVLYMLGLTHMA 116 Query: 144 MIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 R +D A + + +++RY NS Y A+ + +N+LA + Sbjct: 117 QDRSFMHDLFNVDRSDRDPTAARQAFRDFQVLLQRYPNSEYSADAKARMVFLKNRLANYD 176 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 + + +Y++RG ++AAI R + V Y D E A +++ +AY L + E Sbjct: 177 LAVADFYIRRGAWIAAINRCEQVQRLYDDTEAARKSLLLEKKAYEKLGMQKE 228 >gi|299771332|ref|YP_003733358.1| DNA uptake lipoprotein [Acinetobacter sp. DR1] gi|298701420|gb|ADI91985.1| DNA uptake lipoprotein [Acinetobacter sp. DR1] Length = 387 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 22/251 (8%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + +A F VG S+ +DS Q +EKA L + A + Sbjct: 11 LALSLGVASAF-VGCSSNPSKKEVVDSGPQSSEQ-AYFEKAQKSLDRGQYLDATKSLEAI 68 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS--- 140 +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ +S Sbjct: 69 DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRAVSNME 128 Query: 141 -----------YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188 Q RDV Y K+ Q ++ R+ +S Y V A+ +G+ + Sbjct: 129 QNYDSLMRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 183 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++ Sbjct: 184 LAENEMTAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYNQLGDKATSQQ 243 Query: 249 VVSLIQERYPQ 259 + +++ YP Sbjct: 244 YIEVLKLNYPN 254 >gi|126640892|ref|YP_001083876.1| putative competence protein (ComL) [Acinetobacter baumannii ATCC 17978] Length = 364 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 20/187 (10%) Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI- 145 +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ G+S +M Sbjct: 51 YPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNMEMNY 110 Query: 146 -------------RDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQLAA 191 RDV Y K+ Q ++ R+ +S Y V A+ +G+ +LA Sbjct: 111 DSLLRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-ELAE 165 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++ + Sbjct: 166 SEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQYIE 225 Query: 252 LIQERYP 258 +++ YP Sbjct: 226 VLKLNYP 232 >gi|157376632|ref|YP_001475232.1| putative lipoprotein [Shewanella sediminis HAW-EB3] gi|157319006|gb|ABV38104.1| putative lipoprotein [Shewanella sediminis HAW-EB3] Length = 282 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 10/211 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A ++ NFSKA +PF + L F Y + + Sbjct: 67 LYSQARTSMELGNFSKAVRSLEALDSRYPFGPHKTQVQLDLIFAYYKLDDAASGIANIDR 126 Query: 120 YITQYPESKNVDYVYYLVGMSYAQ----MIRDV------PYDQRATKLMLQYMSRIVERY 169 +I P K++DYVYY+ G+ Q M D+ D + + R+++ Y Sbjct: 127 FIRLNPTHKDIDYVYYMRGLVNMQSDNYMFHDMLDIDRTDRDPKVAQDAFNDFDRLIKSY 186 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 S Y A + +N+LA + + YY+K + AA R Q V+ Y E A Sbjct: 187 PKSKYAPDAAKRMLYLKNRLAKYSINVAEYYIKMNAWSAASTRAQSVMETYPGTTSTERA 246 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + EAY L V+S+++ +P Sbjct: 247 LEIMAEAYGELGQEKLRENVLSVMKINFPNN 277 >gi|88811116|ref|ZP_01126372.1| probable transmembrane protein [Nitrococcus mobilis Nb-231] gi|88791655|gb|EAR22766.1| probable transmembrane protein [Nitrococcus mobilis Nb-231] Length = 251 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 13/212 (6%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y+KA L ++ A + +PF + ++ L + Y A A + + Sbjct: 34 LYDKARELLDAGDYMAAVKRLEDLQAQYPFGPYSEQAQLNIIYAYYKANDTVSAVAAADR 93 Query: 120 YITQYPESKNVDYVYYLVG-------MSYAQMIRDVPYDQRATKLMLQ--YMSR-IVERY 169 +I P V Y YY+ G + + Q + + +R + + Q Y R ++E Y Sbjct: 94 FIRFNPRHAKVAYAYYMKGVAQQEQGLGFIQSLLHMDRAKRDPEPLRQAFYSFRSLLEAY 153 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 S Y AR + R+ LA E++I +YY++RG +VAAI R + V+ +Y+ EA Sbjct: 154 PESRYADDARQRMAQLRDLLAQHELQICQYYIRRGAWVAAINRARSVVLDYAGTPAVAEA 213 Query: 230 MARLVEAYVAL---ALMDEAREVVSLIQERYP 258 + L++ Y + AL ++ R V+ L +P Sbjct: 214 LHLLLQGYQHIELPALKEDVRRVLRLNYPHHP 245 >gi|320157326|ref|YP_004189705.1| putative component of the lipoprotein assembly complex [Vibrio vulnificus MO6-24/O] gi|319932638|gb|ADV87502.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Vibrio vulnificus MO6-24/O] Length = 241 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 10/206 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y +A L+ N+ A E +PF + + L + Y + Sbjct: 32 ELYAEAQTSLQGGNWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIS 91 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168 + P + +D+V Y+ G+++ R+ +D K +++ER Sbjct: 92 RFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRSDRDPEPVKQAFDDFKKLLER 151 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y +SPY + ++ + +N+LA ++ YYL+R ++AAI R Q + Y D A + Sbjct: 152 YPSSPYAEDSQKRMFALKNRLAEYDLATADYYLRREAWIAAINRSQELQKTYPDTIAARK 211 Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254 ++ +EAY L L D LI+ Sbjct: 212 SLKIQLEAYKQLGLQDAIARTEELIR 237 >gi|262163885|ref|ZP_06031624.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio mimicus VM223] gi|262027413|gb|EEY46079.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio mimicus VM223] Length = 214 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/206 (22%), Positives = 89/206 (43%), Gaps = 10/206 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y +A L+ + A E +PF + + L + Y + E Sbjct: 5 ELYSEAQSALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIE 64 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168 + P + +D+V Y+ G+++ R+ +D K ++++R Sbjct: 65 RFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNVDRSDRDPEPVKSAFADFKKLLQR 124 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NSPY + A+ + +N+LA ++ +YL+R ++AAI R Q + + D E A + Sbjct: 125 YPNSPYAEDAQRRMYALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTFPDTEAARK 184 Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254 A+ +EAY L + + L++ Sbjct: 185 ALDIQLEAYQQLGMTEAVERTEQLMK 210 >gi|162451869|ref|YP_001614236.1| hypothetical protein sce3596 [Sorangium cellulosum 'So ce 56'] gi|161162451|emb|CAN93756.1| hypothetical protein sce3596 [Sorangium cellulosum 'So ce 56'] Length = 285 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 8/206 (3%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 R Y +A+ + +++ A F + R FP++ AR + L A + + GKY +A S Sbjct: 42 RAAYNEAMAAFQAKDWEDARALFGEVKRLFPYSRYARLADLRIADLDFEQGKYPEAISEY 101 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDV----PYDQRATKLMLQYMSRI---VERYT 170 +I ++ +NV+Y Y + + I D P ++R L+ I + +Y Sbjct: 102 RAFIQEHRTDRNVEYAKYRMAKALYLDIDDTVFLPPAEERDQATTLEAYKEIRTFLRQYP 161 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 S Y + A + + V +L E+ + RYYLK + AA+ R L + + EA+ Sbjct: 162 RSRYREDAAYMLEVVTGRLVRHELYVARYYLKEDAFDAALARIDYALRTFPGSGLDPEAL 221 Query: 231 ARLVEAYVALALMDEAREVV-SLIQE 255 E + + DEAR V S+I++ Sbjct: 222 VLKGETLLKMKKPDEARAVFESVIRD 247 >gi|291618566|ref|YP_003521308.1| YfiO [Pantoea ananatis LMG 20103] gi|291153596|gb|ADD78180.1| YfiO [Pantoea ananatis LMG 20103] gi|327394947|dbj|BAK12369.1| UPF0169 lipoprotein YfiO precursor [Pantoea ananatis AJ13355] Length = 243 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/215 (23%), Positives = 93/215 (43%), Gaps = 11/215 (5%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D+V D E+Y A L++ NF A + +PF +++ L + Y Sbjct: 25 DAVPD-NPPSEIYATAQQKLQDGNFKAAIKQLEALDNRYPFGPYSQQVQLDLIYAYYKNA 83 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158 A + ++ P N+DYV Y+ G++ + I D + Sbjct: 84 DLPMAQAAISRFMRLNPTHPNIDYVIYMKGLTDMALDDSALQGFFGIDRSDRDPTHARDA 143 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + ++++ Y NS Y A +++L+ E+ + ++Y KRG YVA + R + ++ Sbjct: 144 FRDFAQLLRSYPNSQYAADAYKRQVYLKDRLSKYELSVAQFYTKRGAYVAVVNRVEGMMR 203 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +Y D + +A+ + AY L L EA +V +I Sbjct: 204 DYPDTQATHDALPLMENAYRQLQLNAEADKVAKII 238 >gi|293448947|ref|ZP_06663368.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli B088] gi|291322037|gb|EFE61466.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli B088] Length = 245 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/205 (21%), Positives = 88/205 (42%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P N+DYV Y+ G++ + + D + + S++ Sbjct: 94 RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLARG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA E + YY +RG +VA + R + +L +Y D + + Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + + +A +V +I Sbjct: 214 ALPLMENAYRQMQMNAQAEKVAKII 238 >gi|42521763|ref|NP_967143.1| competence protein ComL [Bdellovibrio bacteriovorus HD100] gi|39574293|emb|CAE77797.1| Competence protein ComL [Bdellovibrio bacteriovorus HD100] Length = 245 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 1/165 (0%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 K + + +A + + FP++ A KS L A V Y Y +A + + +P Sbjct: 42 KSERYEEAIRRYTEVKNKFPYSNFATKSELAIADVYYKQESYAEAQVSYQMFKELHPTVP 101 Query: 129 NVDYVYYLVGMS-YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 N DYV + +GMS Y Q+ + D + +S ++++Y NS +V A+ T Sbjct: 102 NSDYVQFRIGMSYYNQLPSTIDRDLTLANDTILNLSDLIKKYPNSEFVNEAKEKRTAAIR 161 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 LA KE I +Y KR + +A+ R++ + NY +A++R Sbjct: 162 MLAEKEEYIADFYFKRKIFDSALGRYEGLYNNYRGLGFDAKALSR 206 >gi|33519651|ref|NP_878483.1| putative lipoprotein [Candidatus Blochmannia floridanus] gi|33517314|emb|CAD83699.1| DNA uptake lipoprotein [Candidatus Blochmannia floridanus] Length = 246 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/249 (19%), Positives = 105/249 (42%), Gaps = 26/249 (10%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 AL + +I+ C + + +D +Y+ A L + N+++A + Sbjct: 9 LALNMIMTIS-CTTISHHKIPDQDT-----------NHLYKIAYNKLLQNNYTEAIQDLL 56 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + F ++ L + Y + A + ++ YP KN+DYV Y+ G+ Sbjct: 57 YLKNLYLFEPCPQQIYLDLIYAYYKSNDLTSANNCINHFLNVYPNHKNLDYVLYIHGIIN 116 Query: 142 AQMIRDVPY--------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 + R+ P+ + + S++++ Y NS Y + + +N Sbjct: 117 MHLDRNNPFPLLIKHLYTCWFNHNPIHANIAFHSFSKLIQNYPNSQYAPDSYKRLIFLKN 176 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 ++A ++ I ++Y K+ Y++ I R + +L + D + +A+ + AY + L+D+A Sbjct: 177 RIAYYKLAIIKFYDKKNAYISVITRSEEMLRYFPDTQATYQALHYMRRAYQNIHLIDQAN 236 Query: 248 EVVSLIQER 256 + +I E Sbjct: 237 IINQIITEN 245 >gi|90580376|ref|ZP_01236183.1| hypothetical protein VAS14_20631 [Vibrio angustum S14] gi|90438678|gb|EAS63862.1| hypothetical protein VAS14_20631 [Vibrio angustum S14] Length = 242 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 17/241 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LTI +AV L G SS++ + V +Y A L++ N++ A E Sbjct: 4 LTITTLLAVALLSGC---SSKEEVIPDVP----PSNLYATAQTALQKGNWTSAIEQLEAL 56 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF + + L + Y + + E ++ P++ D+V Y+ G+++ Sbjct: 57 DSRYPFGAYSDQVQLDLIYAYYKSDDLALGEATIERFLRLNPDNPQADWVVYMRGLTHMA 116 Query: 144 MIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 R +D ++ + ++ERY S Y A+ + +N+LA + Sbjct: 117 QDRSFMHDMFNINRFDRDPTPSRQAFKDFKYLLERYPESEYGADAKARMIFLKNRLANYD 176 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +Y++R ++AAI R Q + Y D E A +++A AY L L E L+ Sbjct: 177 LSTADFYIRREAWIAAINRCQQIQRLYPDTEAARQSLALEKTAYEKLNLQKEVERTDKLM 236 Query: 254 Q 254 + Sbjct: 237 K 237 >gi|262280060|ref|ZP_06057845.1| competence lipoprotein comL [Acinetobacter calcoaceticus RUH2202] gi|262260411|gb|EEY79144.1| competence lipoprotein comL [Acinetobacter calcoaceticus RUH2202] Length = 387 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 24/257 (9%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y++ AL++ + A VG S+ +DS Q +EKA L + A Sbjct: 6 YKITMLALSLGLASA---FVGCSSNPSKKEVVDSGPQSSEQ-AYFEKAQKSLDRGQYLDA 61 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ Sbjct: 62 TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYV 121 Query: 137 VGM--------------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFY 181 + S Q RDV Y K+ Q ++ R+ +S Y V A+ Sbjct: 122 RAVANMEQNYDSLMRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRM 177 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 +G+ +LA E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L Sbjct: 178 KFIGQ-ELAENEMTAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYSQLG 236 Query: 242 LMDEAREVVSLIQERYP 258 +++ + +++ YP Sbjct: 237 DKATSQQYIEVLKLNYP 253 >gi|146312716|ref|YP_001177790.1| outer membrane protein assembly complex subunit YfiO [Enterobacter sp. 638] gi|145319592|gb|ABP61739.1| conserved hypothetical protein [Enterobacter sp. 638] Length = 245 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/205 (21%), Positives = 88/205 (42%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQATID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 ++ P N+DYV Y+ G++ + + D + + S++V Sbjct: 94 RFMRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA E + YY +RG +VA + R + +L +Y D + + Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTRRGAWVAVVNRVEGMLRDYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 + + AY + + +A +V +I Sbjct: 214 GLKLMENAYRQMQMNAQAEKVAKII 238 >gi|170728052|ref|YP_001762078.1| putative lipoprotein [Shewanella woodyi ATCC 51908] gi|169813399|gb|ACA87983.1| putative lipoprotein [Shewanella woodyi ATCC 51908] Length = 268 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 10/211 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A ++ N+SKA +PF + L + Y + + Sbjct: 53 LYSQARTSMELGNYSKAVRSLEALDSRYPFGPHKTQVQLDLIYAYYKLDDPASGIANIDR 112 Query: 120 YITQYPESKNVDYVYYLVGMSYAQ----MIRDV------PYDQRATKLMLQYMSRIVERY 169 +I P KN+DYVYY+ G+ Q M D+ D + + + R+++ Y Sbjct: 113 FIRLNPTHKNIDYVYYMRGLVNMQSDNYMFHDMLNIDRTDRDPKVAQDAFKDFDRLIKSY 172 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 NS Y A + +N+LA + + YY+K + AA R Q V+ + E A Sbjct: 173 PNSKYAPDAAKRMQQLKNRLAKYSINVAEYYIKMNAWSAAATRAQSVMETFPGTPSTERA 232 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + AY L V+S++Q +P Sbjct: 233 LEIMSIAYGELGQAKLKENVLSVMQANFPNN 263 >gi|91794215|ref|YP_563866.1| putative lipoprotein [Shewanella denitrificans OS217] gi|91716217|gb|ABE56143.1| putative lipoprotein [Shewanella denitrificans OS217] Length = 253 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/254 (21%), Positives = 104/254 (40%), Gaps = 17/254 (6%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y+ K A + S+A+ S D + + + +Y +A ++ N+SKA Sbjct: 2 YKFAKGAALVMLSLAITACSS----SPEDA---DIANKKSPEALYAQARTSMELGNYSKA 54 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 +PF + L F Y + + ++ P N+DYV+Y+ Sbjct: 55 ARSLEALDSRYPFGPHKTQVQLDLIFAYYKMDDAASGLANIDRFLRLNPTHPNIDYVHYM 114 Query: 137 VGMSYAQM-------IRDVPYDQRATKLM---LQYMSRIVERYTNSPYVKGARFYVTVGR 186 G++ Q + D+ R TK + ++++ Y NS Y A+ + + Sbjct: 115 RGLTNMQADNYLFHDMLDIDRTDRDTKNAQDAFKDFDKLIKSYPNSKYAADAQQRMQYLK 174 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 N+LA V + YY+K + AA R Q V+ + + E A+ + EAY L Sbjct: 175 NRLANYSVIVAEYYIKMNAWSAAAVRAQTVMEKFPNTPSTERALEIMAEAYQELGQTQLK 234 Query: 247 REVVSLIQERYPQG 260 + V+++++ +P Sbjct: 235 QNVLTVLKANFPSN 248 >gi|51244660|ref|YP_064544.1| hypothetical protein DP0808 [Desulfotalea psychrophila LSv54] gi|50875697|emb|CAG35537.1| hypothetical protein DP0808 [Desulfotalea psychrophila LSv54] Length = 265 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/248 (23%), Positives = 109/248 (43%), Gaps = 35/248 (14%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA-----VLFLKEQNF 73 L+ FA+ I IA+ L G + S+ D+ Y++ E + +++ N Sbjct: 11 LHSFAIII---IAMSLLGGCAD-------MKSMFDITYEKPDLEFPANDLIIKGMEDYNV 60 Query: 74 SK---AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 K A YF + +PF+ A + L +A Y KY +A + +++ ++P ++ + Sbjct: 61 GKYFGAISYFQEILEKYPFSPEAPLAELKAADCNYYMDKYPEALAQYQDFEDRHPTNEAI 120 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 YV Y GMS + I + D + + + S+++ + NSPY AR + + LA Sbjct: 121 PYVMYQKGMSNYKQIDRIDRDPIVARRAVDFFSQLLRAFPNSPYTTNARKNIAEAISFLA 180 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 E + +YL+ +Y E AE + L+ AY ++ +A +++ Sbjct: 181 DHEFAVIEFYLRTEKY-----------------EQAETRLEYLITAYPNTNVIPKAEKIL 223 Query: 251 SLIQERYP 258 + IQ P Sbjct: 224 AEIQAGNP 231 >gi|157962984|ref|YP_001503018.1| putative lipoprotein [Shewanella pealeana ATCC 700345] gi|157847984|gb|ABV88483.1| putative lipoprotein [Shewanella pealeana ATCC 700345] Length = 268 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 10/211 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A ++ N+SKA FPF + L + Y + + Sbjct: 53 LYSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKLDDPASGIANIDR 112 Query: 120 YITQYPESKNVDYVYYLVGMSYAQ----MIRDV------PYDQRATKLMLQYMSRIVERY 169 +I P K++DYVYY+ G+ Q + D+ D +A + R+++ Y Sbjct: 113 FIRLNPTHKDIDYVYYMRGLVNMQSDRYLFHDMLNIDRSDRDPKAAQDAFNDFDRLIKSY 172 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 NS Y A+ + +N+LA +++ YY+K + AA R Q VL Y E+A Sbjct: 173 PNSKYAADAQKRMQHLKNRLALYSIKVAEYYIKMNAWSAAAIRAQSVLETYPGTPSTEKA 232 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + AY L V+ +++ YP Sbjct: 233 LEIMSTAYGELGQEKLKDHVLMVMKANYPNN 263 >gi|95929334|ref|ZP_01312077.1| lipoprotein, putative [Desulfuromonas acetoxidans DSM 684] gi|95134450|gb|EAT16106.1| lipoprotein, putative [Desulfuromonas acetoxidans DSM 684] Length = 252 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/195 (24%), Positives = 89/195 (45%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +K + ++++++ A E++ + F + + L Y+ Y A + E+++ Sbjct: 39 QKGEIAMEKEHYLAAIEHWQKVRDSFTSPELTALAELKIGDAYYAQEDYISAVASYEDFL 98 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 ++P V Y +G S+ + DQ AT+ L ++++ Y +S + Y Sbjct: 99 KKHPGHTQTASVMYRLGKSHFAQLLSADRDQTATRNALATFEQLLKNYPDSIDPQELNSY 158 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 + N+LAA E IGR+YLK Y AAI R + + Y + + + L A Sbjct: 159 IEQCHNRLAANEAYIGRFYLKTKRYTAAISRLENITNTYPNYPNLTGVLFDLARAQKFDG 218 Query: 242 LMDEAREVVSLIQER 256 D+A +SL+Q+R Sbjct: 219 KSDQALATLSLLQQR 233 >gi|302342571|ref|YP_003807100.1| outer membrane assembly lipoprotein YfiO [Desulfarculus baarsii DSM 2075] gi|301639184|gb|ADK84506.1| outer membrane assembly lipoprotein YfiO [Desulfarculus baarsii DSM 2075] Length = 280 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 2/189 (1%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 +E N+ +A E F Q FP++ A + L + +Y +A E++I +P+++ Sbjct: 62 QEGNYEEAAETFQQLKDRFPYSKFALLADLRLGDAYFKDERYDEAILAYEDFIRLHPKNE 121 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 V Y Y +GM Y + + D + ++ +++ Y + + A + Sbjct: 122 GVPYAMYQIGMVYHEQMLTPDRDPTFARKAMEAFQKLMREYPKNEWSVKAVPRFQESAAR 181 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL--VEAYVALALMDEA 246 AA ++ +G++Y G+Y AAI RF+ V+ Y D +EAM+ L +A L +EA Sbjct: 182 AAAHDLAVGKFYYNTGKYPAAIYRFKRVMTQYPDVGLYDEAMSALQRAQADYDEQLAEEA 241 Query: 247 REVVSLIQE 255 E L +E Sbjct: 242 EEYAGLSEE 250 >gi|323951204|gb|EGB47080.1| outer membrane assembly lipoprotein YfiO [Escherichia coli H252] Length = 249 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 10/201 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 +I P N+DYV Y+ G++ + + D + + S++V Sbjct: 94 RFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA E + YY +RG +VA + R + +L +Y D + + Sbjct: 154 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREV 249 A+ + AY + + +A +V Sbjct: 214 ALPLMENAYRQMQMNAQAEKV 234 >gi|254508946|ref|ZP_05121053.1| DNA uptake lipoprotein [Vibrio parahaemolyticus 16] gi|219548121|gb|EED25139.1| DNA uptake lipoprotein [Vibrio parahaemolyticus 16] Length = 214 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 10/206 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y +A + L+ N+ A +PF + + L + Y + E Sbjct: 5 ELYSEAQVSLQSGNWLSAISQLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIE 64 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168 + P + +D+V Y+ G+++ R+ +D K R++ER Sbjct: 65 RFTRLNPTHEKLDWVLYMRGLTHMAQDRNFMHDLFNVDRSDRDPEPVKKAFADFKRLLER 124 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y S Y + ++ + +N+LA ++ +YL+R ++AAI R Q + Y D A + Sbjct: 125 YPTSLYAEDSQKRMLALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTVAARK 184 Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254 ++ +EAY L L D + LI+ Sbjct: 185 SLKIQLEAYKQLGLEDAIKRTEELIK 210 >gi|222053859|ref|YP_002536221.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. FRC-32] gi|221563148|gb|ACM19120.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. FRC-32] Length = 244 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 20/161 (12%) Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y +AA+ +++ +P Y YY + + Y I + DQ K ++++ ++ Y Sbjct: 80 YIEAAAAYDDFRKLHPNHDQAAYAYYRLALCYYNQITGIDTDQTPVKNAVKFLDSFIKLY 139 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE-- 227 + YV A+ + + EV +G +YL+ G+Y AAI R + LA Y E+++ Sbjct: 140 PKAEYVPEAKAKLDECIGKQVEYEVYVGHFYLRSGKYQAAIKRLEETLAKYPKVENSDQV 199 Query: 228 ------------------EAMARLVEAYVALALMDEAREVV 250 EA RL + YV+ ++EAR+V+ Sbjct: 200 LFYIGKAYFLSGDKAKGKEAFNRLAKQYVSSRYLEEARQVM 240 >gi|77919977|ref|YP_357792.1| TPR domain-containing protein [Pelobacter carbinolicus DSM 2380] gi|77546060|gb|ABA89622.1| TPR domain protein [Pelobacter carbinolicus DSM 2380] Length = 245 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 9/196 (4%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 F S+A C L + V + + E + + L +++ A + + + Sbjct: 7 FLSVA-CLLTACSTAT--------VPEAKTAEEYFNRGELAFANEDYQDAIKSYEKAMEI 57 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 + A + R++ L A ++ Y +AA+ E+++ ++P + V + +G SY I Sbjct: 58 YETAALNRRAELRIADAHFANKDYVEAAAGYEDFLKRHPGTPQSARVLFQLGESYFNQIL 117 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 + DQ AT+ L +++ Y ++P + A V +N LAA E+ +G +Y K ++ Sbjct: 118 AIDRDQTATRNALVTFESLIKIYPDAPESRIAPERVRACKNHLAANELYVGLFYYKFEKH 177 Query: 207 VAAIPRFQLVLANYSD 222 AAI R +L Y + Sbjct: 178 KAAIGRLTEMLDKYPE 193 >gi|325121170|gb|ADY80693.1| putative competence protein (ComL) [Acinetobacter calcoaceticus PHEA-2] Length = 387 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 62/250 (24%), Positives = 108/250 (43%), Gaps = 22/250 (8%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + +A F VG S+ +D+ Q +EKA L + A + Sbjct: 11 LALSLGVASAF-VGCSSNPSKKEVVDTGPQSSEQ-AYFEKAQKSLDRGQYLDATKSLEAI 68 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM---- 139 +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ + Sbjct: 69 DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRAVANME 128 Query: 140 ----------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188 S Q RDV Y K+ Q ++ R+ +S Y V A+ +G+ + Sbjct: 129 QNYDSLMRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 183 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++ Sbjct: 184 LAENEMTAARFNVKRKAWIAAAERSQWVIEHYPQTPQIPEALATLAYSYDKLGDKATSQQ 243 Query: 249 VVSLIQERYP 258 + +++ YP Sbjct: 244 YIEVLKLNYP 253 >gi|294142198|ref|YP_003558176.1| hypothetical protein SVI_3427 [Shewanella violacea DSS12] gi|293328667|dbj|BAJ03398.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 253 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 103/257 (40%), Gaps = 23/257 (8%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLD---SVTDVRYQREVYEKAVLFLKEQNF 73 ++ K A+ FSIA+ SS D L + DV +Y +A ++ N+ Sbjct: 2 HKFAKGAVLALFSIAITAC-----SSSPDEELKASKTSPDV-----LYSQARTSMELGNY 51 Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 SKA +PF + L + Y + + +I P K++DYV Sbjct: 52 SKAVRSLEALDSRYPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRFIRLNPTHKDIDYV 111 Query: 134 YYLVGMSYAQ----MIRDV------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 YY+ G+ Q M D+ D + + R+++ Y NS Y A + Sbjct: 112 YYMRGLVNMQSDSYMFHDMLNIDRTDRDPQVAINAFKDFDRLIKSYPNSKYANDAAERMQ 171 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 +N+LA + + YY+K + AA R Q V+ Y E A+ + +AY L Sbjct: 172 YLKNRLAKYSINVAEYYMKMNAWSAAAIRAQSVMETYPGTSSTERALEIMADAYGELGQE 231 Query: 244 DEAREVVSLIQERYPQG 260 V+++++ YP Sbjct: 232 KLKNNVLTVMKANYPDN 248 >gi|54310132|ref|YP_131152.1| hypothetical protein PBPRA3022 [Photobacterium profundum SS9] gi|46914571|emb|CAG21350.1| conserved hypothetical protein [Photobacterium profundum SS9] Length = 242 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 29/246 (11%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LTI +AV L G S+ +V V DV E+Y A L+ +++ A E Sbjct: 4 LTITTLLAVAILSGCS--STEEV----VPDVP-PAELYVTAQQALQSGSWTTAIERLETL 56 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY----PESKNVDYVYYLVGM 139 +PF + + L + Y +LGE I ++ P + D+V Y+ G+ Sbjct: 57 DSRYPFGAYSEQVQLDLIYAYYKNDDL----ALGEATIARFNRLNPAHEKSDWVLYMRGL 112 Query: 140 SYAQMIRDVPY------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 + QM +D + D + + R+++RY NS Y A+ + +N Sbjct: 113 T--QMAQDRSFMHDIFSIDRHDRDPEPARKAFRDFKRLLDRYPNSQYAADAKARMIFIKN 170 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 +LA ++ +Y++R ++AAI R Q + Y D + A +++ ++ AY L L + Sbjct: 171 RLADYDLATVDFYIRREAWIAAINRSQQIQKLYPDTQAARKSLPLMLTAYEKLGLQEPIE 230 Query: 248 EVVSLI 253 LI Sbjct: 231 NTKKLI 236 >gi|167625161|ref|YP_001675455.1| putative lipoprotein [Shewanella halifaxensis HAW-EB4] gi|167355183|gb|ABZ77796.1| putative lipoprotein [Shewanella halifaxensis HAW-EB4] Length = 268 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 10/211 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A ++ N+SKA FPF + L + Y + + Sbjct: 53 LYSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKLDDPASGIANIDR 112 Query: 120 YITQYPESKNVDYVYYLVGMSYAQ----MIRDV------PYDQRATKLMLQYMSRIVERY 169 +I P K++DYVYY+ G+ Q + D+ D +A + + R+++ Y Sbjct: 113 FIRLNPTHKDIDYVYYMRGLVNMQSDRYLFHDMLNIDRSDRDPKAAQDAFKDFDRLIKSY 172 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 NS Y A+ + +N+LA +++ YY+K + AA R Q VL Y AE+A Sbjct: 173 PNSKYAADAQKRMQHLKNRLALYSIKVAEYYIKMNAWSAAAVRAQSVLETYPGTPSAEKA 232 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + AY L + +++ +P Sbjct: 233 LEIMSTAYGELGQEKLKDHALMVMKANFPNN 263 >gi|163750157|ref|ZP_02157400.1| hypothetical protein KT99_20856 [Shewanella benthica KT99] gi|161330214|gb|EDQ01196.1| hypothetical protein KT99_20856 [Shewanella benthica KT99] Length = 269 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 61/267 (22%), Positives = 107/267 (40%), Gaps = 17/267 (6%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 M +L + + ++ K A+ FSIA+ SS D L + + R + Sbjct: 1 MEKILTTTLKESKLSMHKFAKGAVLALFSIAITAC-----SSSPDEELKA--NKRSPDVL 53 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A ++ NFSKA +PF + L + Y + + + Sbjct: 54 YSQARTSMELGNFSKAVRSLEALDSRYPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRF 113 Query: 121 ITQYPESKNVDYVYYLVGMSYAQ----MIRDV------PYDQRATKLMLQYMSRIVERYT 170 I P K++DYVYY+ G+ Q M D+ D + + + R+++ Y Sbjct: 114 IRLNPTHKDIDYVYYMRGLVNMQSDSYMFHDMLNIDRTDRDPKVAQDAFKDFDRLIKSYP 173 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 NS Y A + +N+LA + + YY+K + AA R Q V+ Y E A+ Sbjct: 174 NSKYAYDAAQRMQFLKNRLAKYSINVAEYYMKMNAWSAAAIRAQSVMETYPGTPSTEHAL 233 Query: 231 ARLVEAYVALALMDEAREVVSLIQERY 257 + +AY L +++++ Y Sbjct: 234 EIMADAYGELGQEKLKENTLTVMKANY 260 >gi|319789104|ref|YP_004150737.1| outer membrane assembly lipoprotein YfiO [Thermovibrio ammonificans HB-1] gi|317113606|gb|ADU96096.1| outer membrane assembly lipoprotein YfiO [Thermovibrio ammonificans HB-1] Length = 316 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 8/175 (4%) Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 N ++ FA +A L A+ ++ G Y+ AA EE++ YP S + +G+ Sbjct: 54 NLPPKEQEFAKIA----LADAY--FNEGDYENAALNYEEFLQLYPASPRAKDALFRLGVC 107 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 Y +++ +D K R ++ Y N P VK A+ Y + R LA E+ IG Y Sbjct: 108 YLNLVKGPQWDVTFAKRAYNIFQRFIKEYPNDPRVKKAKLYAELARKILAEHEIYIGGTY 167 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 ++ A+I R+ V + D E + + L AY L +A+E + ++E Sbjct: 168 DMLRKFTASIQRYTDVERKFKDVEAPDRLLYLLGRAYYYTPL--QAKEEIERLKE 220 >gi|149190360|ref|ZP_01868633.1| hypothetical protein VSAK1_14142 [Vibrio shilonii AK1] gi|148835849|gb|EDL52813.1| hypothetical protein VSAK1_14142 [Vibrio shilonii AK1] Length = 241 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 44/206 (21%), Positives = 88/206 (42%), Gaps = 10/206 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L+ N++ A E +PF + L + Y + E Sbjct: 32 QLYAEAQESLQGGNWTSAIERLEALDSRYPFGAYTEQVQLDLIYAYYKNDDLALGLATIE 91 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVER 168 + P + D+V Y+ G+++ R+ +D K R+++R Sbjct: 92 RFSRLNPTHERSDWVLYMRGLTHMAQDRNFMHDILRIDRSDRDPEPVKAAFADFDRLLKR 151 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y + A+ + +N+LA ++ +Y++R ++AAI R Q + Y D E A + Sbjct: 152 YPNSAYAEDAQKRMVALKNRLAKYDLATADFYIRREAWIAAINRAQEIQKTYPDTEAARQ 211 Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254 ++ +AY L + ++ L++ Sbjct: 212 SLVLQKKAYEELGMQEQVERTEKLME 237 >gi|90414901|ref|ZP_01222866.1| hypothetical protein P3TCK_25174 [Photobacterium profundum 3TCK] gi|90324015|gb|EAS40609.1| hypothetical protein P3TCK_25174 [Photobacterium profundum 3TCK] Length = 242 Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 60/246 (24%), Positives = 107/246 (43%), Gaps = 29/246 (11%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LTI +AV L G S+ +V V D+ E+Y A L+ +++ A E Sbjct: 4 LTITTLLAVAILSGCS--STEEV----VPDIP-PAELYVTAQQALQSGSWTTAIERLETL 56 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY----PESKNVDYVYYLVGM 139 +PF + + L + Y +LGE I ++ P + D+V Y+ G+ Sbjct: 57 DSRYPFGAYSEQVQLDLIYAYYKNDDL----ALGEATIARFNRLNPAHEKSDWVLYMRGL 112 Query: 140 SYAQMIRDVPY------------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 + QM +D + D + + R+++RY NS Y A+ + +N Sbjct: 113 T--QMAQDRSFMHDIFSIDRHDRDPEPARKAFRDFKRLLDRYPNSQYAADAKARMIFIKN 170 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 +LA ++ +Y++R ++AAI R Q + Y D + A +++ ++ AY L L + Sbjct: 171 RLADYDLATVDFYIRREAWIAAINRSQQIQRLYPDTQAARKSLPLMLTAYEKLGLQEPIE 230 Query: 248 EVVSLI 253 LI Sbjct: 231 NTKKLI 236 >gi|85058560|ref|YP_454262.1| outer membrane protein assembly complex subunit YfiO [Sodalis glossinidius str. 'morsitans'] gi|84779080|dbj|BAE73857.1| putative lipoprotein [Sodalis glossinidius str. 'morsitans'] Length = 243 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 34/246 (13%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A T+ +A C S++D D+ E+Y A L++ N+ A + Sbjct: 10 AATLCLVLAGC-------SSNKDAVPDNPPS-----EIYASAQQKLQDGNYKGAIKELEA 57 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +PF A++ L + Y + A + + ++ P NVDYV Y+ G++ Sbjct: 58 LDNRYPFGPYAQQVQLDLIYAYYKSADLPLAQASIDRFLRLNPTHPNVDYVLYMRGLT-- 115 Query: 143 QMIRDVPYDQRA----------------TKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 D+ D A + + ++++ Y NS Y A + + Sbjct: 116 ----DMALDDSALQGFFGVDRSDRNPEHARAAFRDFTQLIRGYPNSQYAMDATKRLVYLK 171 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 ++LA E+ + YY KRG YVA R + +L ++ D + +A+ + +AY L L +A Sbjct: 172 DRLAKHELSVVEYYDKRGAYVAVANRVEQMLRDFPDTQATRQALPYMEKAYRELQLSGQA 231 Query: 247 REVVSL 252 ++ + Sbjct: 232 DKMSKI 237 >gi|258406026|ref|YP_003198768.1| outer membrane assembly lipoprotein YfiO [Desulfohalobium retbaense DSM 5692] gi|257798253|gb|ACV69190.1| outer membrane assembly lipoprotein YfiO [Desulfohalobium retbaense DSM 5692] Length = 244 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 36/165 (21%), Positives = 78/165 (47%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +E+ E + E+++ A EYF + +PF+ + L + +Y+ A Sbjct: 38 QELAEAGRAAMAEKDYDAAIEYFTKLKERYPFSPYTPDAELALGDAYFLDEQYKAAVDTY 97 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 +E+ + +P K + +V + +G++ + + Q + LQY R+ + + +PY + Sbjct: 98 KEFESLHPRHKAIPHVLFQIGLANFKQFDSIDRPQTNMEEALQYFRRVQQGFPETPYAEK 157 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 A Y+T R A E+ + +Y +R ++ AA R+ V +++ Sbjct: 158 AGDYITQCRRYQAEHELFVADFYWRREDFGAAWKRYAYVAEEFAE 202 >gi|328951914|ref|YP_004369248.1| outer membrane assembly lipoprotein YfiO [Desulfobacca acetoxidans DSM 11109] gi|328452238|gb|AEB08067.1| outer membrane assembly lipoprotein YfiO [Desulfobacca acetoxidans DSM 11109] Length = 241 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 71/155 (45%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 L++ + A + F + +P++ A + L A +Y KY +A +E+ +P + Sbjct: 46 LRKGKYEDAVDAFEKLKDRYPYSDEALLASLKVADAKYYNKKYDEALLDYKEFEKLHPTN 105 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 + + YV Y GM Y + + D T +Q R+ ERY + A Y+ N Sbjct: 106 QIIPYVIYQQGMCYYRQRSTIDRDPTYTVKAVQEYRRLKERYPQYEKISKAEDYMDKCLN 165 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 +LA E +G +Y K Y AA+ RF ++ Y D Sbjct: 166 ELADHEYYVGEFYFKNKHYQAALERFAIIEQEYPD 200 >gi|303245508|ref|ZP_07331792.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio fructosovorans JJ] gi|302493357|gb|EFL53219.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio fructosovorans JJ] Length = 245 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 79/167 (47%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +E+YE + E+++ A ++F + +PF+ + A + Y AA Sbjct: 38 QELYEAGRQAMSEKDYYGAAKFFIKLKDRYPFSPYTPMGTIALADAYFLTEDYGPAAETY 97 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 +E+ + +P S+ + YV Y +G+S + + Q + LQY + + + ++ Y K Sbjct: 98 KEFESVHPRSEEIPYVLYQIGVSNFKRSESIDMPQGNLQEALQYFYLLQQTFPDTEYGKE 157 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 A Y+ R +LA E+ + +Y + +Y AA R+ + N+ D E Sbjct: 158 AAEYIRRCRKRLAEHELFVADFYWRTDQYGAAWKRYMYTVENFKDLE 204 >gi|1246513|emb|CAA94434.1| unkown [Escherichia coli K-12] Length = 203 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/196 (21%), Positives = 85/196 (43%), Gaps = 10/196 (5%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 +++ N+ +A +PF +++ L + Y A + + +I P Sbjct: 1 MQDGNWRQAITQLEALYNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH 60 Query: 128 KNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 N+DYV Y+ G++ + + D + + S++V Y NS Y Sbjct: 61 PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTD 120 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A + +++LA E + YY +RG +VA + R + +L +Y D + +A+ + AY Sbjct: 121 ATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAY 180 Query: 238 VALALMDEAREVVSLI 253 + + +A +V +I Sbjct: 181 RQMQMNAQAEKVAKII 196 >gi|311278475|ref|YP_003940706.1| outer membrane assembly lipoprotein YfiO [Enterobacter cloacae SCF1] gi|308747670|gb|ADO47422.1| outer membrane assembly lipoprotein YfiO [Enterobacter cloacae SCF1] Length = 245 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/205 (20%), Positives = 89/205 (43%), Gaps = 10/205 (4%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y A L++ N+ +A +PF +++ L + Y A + + Sbjct: 34 EIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAID 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 ++ P N+DYV Y+ G++ + + D + + +++V Sbjct: 94 RFMRLNPTHPNIDYVIYMRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFTKLVRG 153 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y S Y A + +++LA E+ + YY RG +VA + R + +L +Y D + + Sbjct: 154 YPQSQYATDAYKRMVFLKDRLAKYELSVVDYYTDRGAWVAVVNRVEGMLRDYPDTQATRD 213 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ ++ AY + + +A +V +I Sbjct: 214 ALPKMENAYRQMQMNAQADKVAKII 238 >gi|330446993|ref|ZP_08310644.1| bamD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491184|dbj|GAA05141.1| bamD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 242 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 55/241 (22%), Positives = 98/241 (40%), Gaps = 17/241 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LTI +AV L G SS++ + V +Y A L+ N++ A E Sbjct: 4 LTITTLLAVALLSGC---SSKEEVIPDVP----PSNLYATAQTALQSGNWTSAIEQLEAL 56 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF + + L + Y + + E ++ P+ D+V Y+ G+++ Sbjct: 57 DSRYPFGAYSDQVQLDLIYAYYKSDDLALGEATIERFLRLNPDHPQADWVVYMRGLTHMA 116 Query: 144 MIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 R +D ++ ++ERY S Y A+ + +N+LA + Sbjct: 117 QDRSFMHDMFNINRFDRDPTPSRQAFTDFKYLLERYPESEYGADAKARMIFLKNRLANYD 176 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +Y++R ++AAI R Q V Y D E A E++ AY L L E ++ Sbjct: 177 LATADFYVRREAWIAAINRCQQVQRLYPDTEAARESLKLEKTAYEKLNLQKEVERTEKMM 236 Query: 254 Q 254 + Sbjct: 237 K 237 >gi|88857988|ref|ZP_01132630.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain [Pseudoalteromonas tunicata D2] gi|88819605|gb|EAR29418.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain [Pseudoalteromonas tunicata D2] Length = 233 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/195 (21%), Positives = 90/195 (46%), Gaps = 10/195 (5%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y+ A L + +A E + +PF ++++ + + Y + ++ + + Sbjct: 25 LYDDAKQTLDSGLYIRAIELLSAIDSRYPFGPMSKQVQMDLVYAHYQSNNTDKSIATIDR 84 Query: 120 YITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERY 169 +I P K++DY+YY+ G++ + + D T+ + + ++++Y Sbjct: 85 FIRLNPNHKDLDYMYYMRGLNNIKADENAFQEYFGVDRADRDPIKTREAYKDLDTLIKKY 144 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 S Y A+ N++A EV++ YY R Y+AA R + V+ ++ + + +EA Sbjct: 145 PTSSYADEAKKRQVWLLNKMARYEVKVANYYYDRQAYLAAANRGKYVVEHFGQSSYVKEA 204 Query: 230 MARLVEAYVALALMD 244 + +V +Y L L D Sbjct: 205 LEIMVNSYDKLGLSD 219 >gi|182415413|ref|YP_001820479.1| TPR repeat-containing protein [Opitutus terrae PB90-1] gi|177842627|gb|ACB76879.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1] Length = 345 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 1/165 (0%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N S+A +YF + P++ A +L+ A A + ++A + I QYP+S Sbjct: 160 NRSRAIDYFEIIVQTAPYSDYAPLALMNKARGHLRARETEEAIDALDRMINQYPQSLLAP 219 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Y + ++A ++ YDQ +TK + Y + + N P V A + + LA Sbjct: 220 DAYLKLAQTHALLVEGPNYDQGSTKEAITYYEDFLILFPNDPNVPTAAKGLDEMKQVLAE 279 Query: 192 KEVEIGRYYL-KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 ++ IG +Y KR Y AA + + +Y D+ A+ A +L E Sbjct: 280 SKIRIGDFYFYKRDNYTAARVFYNEAITSYPDSPVAQRARTKLAE 324 >gi|283850645|ref|ZP_06367932.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio sp. FW1012B] gi|283573888|gb|EFC21861.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio sp. FW1012B] Length = 245 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 77/168 (45%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +E+YE + E+++ A YF + +PF+ + A + Y AA Sbjct: 38 QELYESGRQAMSEKDYYGAIGYFMKLKDRYPFSPYTPMGTVALADAYFLTEDYGPAAETY 97 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 +E+ + +P S+ + YV Y +G+S + + Q + LQY + + + ++ Y K Sbjct: 98 KEFESVHPRSEEIPYVLYQIGVSNFKRSESIDMPQGNLQEALQYFYLLEQTFPDTDYGKE 157 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 A Y+ R +LA E+ + +Y + ++ AA R+ N+ D E Sbjct: 158 AAEYIRRCRKRLAEHELFVADFYWRTDQFGAAWKRYMYTAENFKDLEE 205 >gi|327399434|ref|YP_004340303.1| outer membrane assembly lipoprotein YfiO [Hippea maritima DSM 10411] gi|327182063|gb|AEA34244.1| outer membrane assembly lipoprotein YfiO [Hippea maritima DSM 10411] Length = 251 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/193 (20%), Positives = 86/193 (44%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 ++S+A + P + A+++ + V ++ G+Y A ++I YP SK Sbjct: 47 HDYSEAEHALTMINAQHPGSIYAKRATIALGDVYFAKGEYILARDYYRKFIKLYPNSKEA 106 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 Y Y + +S+ + D + ++ ++++Y N+PY +Y+T +L Sbjct: 107 VYAKYHIALSFYKARNGYKCDATPVREAIKEFLDLLDKYPNNPYKDKIYYYITKSVEELY 166 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 E+ + ++Y E+ AA R + ++ + +E + L + Y L +A+E Sbjct: 167 KHELFVAKFYADLDEFNAAKNRLNYMYKHFKNVNFNDEMLFLLGKVYYHLGKKQQAKEFF 226 Query: 251 SLIQERYPQGYWA 263 + ++YP +A Sbjct: 227 KELIKKYPNSDYA 239 >gi|293609057|ref|ZP_06691360.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829630|gb|EFF87992.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 387 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 60/250 (24%), Positives = 107/250 (42%), Gaps = 22/250 (8%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + +A F VG S+ +++ Q +EKA L + A + Sbjct: 11 LALSLGVASAF-VGCSSNPSKKEVVNTGPQSSEQ-AYFEKAQKSLDRGQYLDATKSLEAI 68 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM---- 139 +P A+++ L + ++ Y+ +L E +I P+ NVDY YY+ + Sbjct: 69 DTYYPTGQYAQQAQLELLYSKFKQKDYEGTIALAERFIRLNPQHPNVDYAYYVRAVANME 128 Query: 140 ----------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQ 188 S Q RDV Y K+ Q ++ R+ +S Y V A+ +G+ + Sbjct: 129 QNYDSLMRYTSLQQSHRDVSY----LKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQ-E 183 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++ Sbjct: 184 LAENEMTAARFNVKRKAWIAAAERSQWVIEHYPQTPQIPEALATLAYSYDKLGDKATSQQ 243 Query: 249 VVSLIQERYP 258 + +++ YP Sbjct: 244 YIEVLKLNYP 253 >gi|239906803|ref|YP_002953544.1| hypothetical protein DMR_21670 [Desulfovibrio magneticus RS-1] gi|239796669|dbj|BAH75658.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 245 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 39/171 (22%), Positives = 78/171 (45%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +E+YE + ++++ A YF + +PF+ + + Y AA Sbjct: 38 QELYEAGRQSMADKDYYGAINYFMKLKDRYPFSPYTPMGTVALGDAYFLTEDYGMAAETY 97 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 +E+ + +P S+ + YV Y VG+S + + Q + +QY + + + ++ Y K Sbjct: 98 KEFESVHPRSEEIPYVLYQVGVSNFKRSESIDMPQSNLQEAIQYFYLLEQTFPDTEYGKE 157 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 A Y+ + ++A E+ + +Y + +Y AA R+ + NY D E E Sbjct: 158 AADYIRRCKKRMAEHELFVADFYWRTSQYGAAWKRYMYTVENYKDLEEVLE 208 >gi|116749145|ref|YP_845832.1| ComL family lipoprotein [Syntrophobacter fumaroxidans MPOB] gi|116698209|gb|ABK17397.1| lipoprotein, ComL family [Syntrophobacter fumaroxidans MPOB] Length = 258 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 73/156 (46%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 ++++++ A + F + +P++ A + L + KY +AA EE+ +P + Sbjct: 67 MQKKDYDDALKAFRKLKEHYPYSKYAILAELKIGDALFHDKKYSEAAIAYEEFARLHPRN 126 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 + V YV Y +GMS+ D T+ ++ R+V+ + S Y + A+ + + Sbjct: 127 EVVPYVLYQIGMSHFLTFTTTDRDPEETQAAIEAFQRVVQMFPQSDYARRAQKQLFECQK 186 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 + AA E + Y + GEY A R + + YS A Sbjct: 187 RAAAHEFNVASLYYRMGEYFATRARLRTINEKYSTA 222 >gi|308048516|ref|YP_003912082.1| outer membrane assembly lipoprotein YfiO [Ferrimonas balearica DSM 9799] gi|307630706|gb|ADN75008.1| outer membrane assembly lipoprotein YfiO [Ferrimonas balearica DSM 9799] Length = 256 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 56/249 (22%), Positives = 97/249 (38%), Gaps = 18/249 (7%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 AL+ F+++ C G R Y V + R +Y A ++ NF+KA + Sbjct: 10 LALSSVFALSACSSTG-----DRSGY---VVEDRTPEALYADARQAMELGNFTKASQVLE 61 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 +PF + L + Y A + + +I P ++DYVYY+ G+ Sbjct: 62 ALDSRYPFGPHKTQVQLDLIYAYYKLDDSASALANVDRFIRLNPTHPDIDYVYYMRGLVN 121 Query: 142 AQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Q I D + +V+ Y NS Y A+ + + +N+LA Sbjct: 122 MQADSYLFHDMLGIDRTDRDPSNAVAAFRDFETLVKSYPNSRYAPDAQRRMIMLKNRLAE 181 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 +++ YY+ +V A R Q VL Y E A+ ++ +Y L VS Sbjct: 182 FSLKVAEYYVTMEAWVGAANRAQQVLETYPGTPATERALEIMITSYDELGQEAMRDHSVS 241 Query: 252 LIQERYPQG 260 +++ +P Sbjct: 242 VLKATFPDN 250 >gi|308272037|emb|CBX28645.1| hypothetical protein N47_G39690 [uncultured Desulfobacterium sp.] Length = 218 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 40/183 (21%), Positives = 83/183 (45%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +E ++ ++ +++ + +A E F + +PF+ + L A Y +Y +A + Sbjct: 34 KEYADEGMVSFQDKEYKRAIESFQKIKDWYPFSNYLVLADLKIADSHYMLKQYNEAVAAY 93 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E+ +P ++ V YV + G+ Y + + Q + ++ R+ +++ + Y Sbjct: 94 NEFEKLHPANEAVPYVIFQTGLCYFEQVDTFDRQQATARKAIEIFMRLNKQFPKNIYETK 153 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 R + + LA E+ IG +Y K Y AA+ RF+ VL Y D +A+ + Sbjct: 154 TRECINICYKTLAESELGIGLFYYKSKYYKAALYRFRNVLTKYPDTGVHHQAIIYIARCE 213 Query: 238 VAL 240 A+ Sbjct: 214 TAI 216 >gi|218780247|ref|YP_002431565.1| outer membrane assembly lipoprotein YfiO [Desulfatibacillum alkenivorans AK-01] gi|218761631|gb|ACL04097.1| outer membrane assembly lipoprotein YfiO [Desulfatibacillum alkenivorans AK-01] Length = 266 Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 78/164 (47%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+ + + ++ ++++A E F + +PF+ A + L A + Y+ A E Sbjct: 31 ELAADGIRYYEKGDYTQAIESFEKLKDWYPFSKYAILAELKLADSYFKRKNYEDAIYAYE 90 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + +P + + YV + +GM Y + DQ AT+ L+ R+ Y S A Sbjct: 91 YFESLHPRNDAIPYVIFQIGMCYFEQKALPDRDQTATESALENFLRLTREYPASAEAAMA 150 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 ++ + + LA ++ +G YY K E+ AA RF+ +LA Y D Sbjct: 151 LEHIKICQETLARHDLFVGAYYFKAKEFHAARVRFRDILAAYPD 194 >gi|58699370|ref|ZP_00374137.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of Drosophila ananassae] gi|58534111|gb|EAL58343.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of Drosophila ananassae] Length = 150 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 11/136 (8%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +YK +T F FL+ QS Y D + + + E+YE+AV ++ + +A Sbjct: 7 MYKTLITCFI-----FLICSFTQS----YADDLE--KTETELYEEAVELFDQKKYKQAIR 55 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F++ +PF+ A K+ L+S Y+ G Y AAS ++YI Y +++ YVYYL Sbjct: 56 AFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASDMDDYIYVYSNGEDLPYVYYLRV 115 Query: 139 MSYAQMIRDVPYDQRA 154 +SY I V Q+ Sbjct: 116 LSYYMQINKVQLGQQT 131 >gi|268316246|ref|YP_003289965.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM 4252] gi|262333780|gb|ACY47577.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM 4252] Length = 280 Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 91/221 (41%), Gaps = 19/221 (8%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L I +A C G R SS +E +E+A+ F + + +A EYF Sbjct: 14 LVIGLLVAGCAGSGRLRHSS-------------PQEAFERAMEFYNQGKYDRAIEYFKAV 60 Query: 84 ---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 R +A A+ L A Y +Y AAS E +I Y V Y M Sbjct: 61 FTYGRTHEWAADAQFYL---ARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMC 117 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 Y ++ DQ T+ ++ ++RY N V A + R +LA K+ E R Y Sbjct: 118 YYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLY 177 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 +R Y AA ++ V Y D A++A+ + AY+A A Sbjct: 178 ERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYA 218 >gi|119713311|gb|ABL97375.1| predicted secreted competence lipoprotein [uncultured marine bacterium EB80_02D08] Length = 272 Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 17/207 (8%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y++A + +N+ A E +PF + ++ + +VQ+ + + A + E++ Sbjct: 38 YDQAQRRIAAKNYFGAIESLEAIETRYPFGKYSEQAQVELIYVQFMNAETEAAHAAAEKF 97 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY------------MSRIVER 168 I +P N+DY Y++ G+S RD + R T L ++ + R Sbjct: 98 IRLHPRHPNIDYAYFMKGLS--SYTRDNSFIVRMTDTDLSNRDISGAKESFSELTEFLTR 155 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + +S Y A+ RN +A E+ YY+ ++AAI R V+ N ++ Sbjct: 156 FPDSQYATYAKQRNIYLRNMIARNELAAADYYVSVDAHIAAIRRANYVIENIPNSSENYR 215 Query: 229 AMARLVEAYVALA---LMDEAREVVSL 252 A+ L E+Y +L L+++ R++++L Sbjct: 216 ALKILEESYDSLGYVELLEDTRKIITL 242 >gi|118581055|ref|YP_902305.1| hypothetical protein Ppro_2643 [Pelobacter propionicus DSM 2379] gi|118503765|gb|ABL00248.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM 2379] Length = 246 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 96/227 (42%), Gaps = 8/227 (3%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 A+C L Q ++ L+ TD E+Y ++ + A + + FP Sbjct: 11 ALCTLTLL--QGCAELKLNKPTD-----ELYRDGEASFQKGKYEDAVIQWRRVKESFPPP 63 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 ++ + + A + Y +AA+ E + +P + + Y Y G+S + I+ + Sbjct: 64 ELSARVEINIADAYFLNKDYIEAAAEYENFRKLHPNHELMGYALYGQGLSNFKQIKGIDT 123 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 DQ K L + Y + + + R++ E+ +G++YL+ G Y AAI Sbjct: 124 DQTPVKNALSLFESYTKLYPGGANLPDVQARIVDCRDKQLQYELYVGKFYLRTGSYPAAI 183 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV-VSLIQER 256 RF+ L + D ++E + L AYV + +EV L++E Sbjct: 184 ARFEEALKGFGDLPRSDETLFYLGSAYVENGQKPKGQEVYTRLLKEH 230 >gi|85860041|ref|YP_462243.1| ComL family lipoprotein [Syntrophus aciditrophicus SB] gi|85723132|gb|ABC78075.1| lipoprotein, ComL family [Syntrophus aciditrophicus SB] Length = 239 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/150 (23%), Positives = 76/150 (50%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 + KA E F + ++P + +A + + YS Y +A + +++ +P ++N+ Y Sbjct: 56 YKKAIESFERLRDEYPMSELAILAKVGIGDAHYSNKAYAEAEAAYNDFVYLHPTNENLPY 115 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 V Y +GM + + + + DQ T + +++ R+ +S + A + R ++A Sbjct: 116 VMYQIGMCHYKQMLSIDRDQTETVRAAKEFEKLLARFPDSKFSLMAEKMLRECRVRIAEH 175 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 E +G +Y K+ +Y AA+ RF+ + Y++ Sbjct: 176 EFYVGEFYFKQKKYQAALKRFETINREYAN 205 >gi|330901398|gb|EGH32817.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. japonica str. M301072PT] Length = 166 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 14/148 (9%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 19 SSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELI 74 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQ----MIRDVPYDQR--- 153 + Y G+ + A S E +I +P+ NVDY YY+ G+ S+ Q + R +P DQ Sbjct: 75 YSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRD 134 Query: 154 --ATKLMLQYMSRIVERYTNSPYVKGAR 179 A + +++ R+ NS Y A+ Sbjct: 135 PGAARDSFNEFAQLTSRFPNSRYAPDAK 162 >gi|148266018|ref|YP_001232724.1| DNA uptake lipoprotein-like protein [Geobacter uraniireducens Rf4] gi|146399518|gb|ABQ28151.1| DNA uptake lipoprotein-like protein [Geobacter uraniireducens Rf4] Length = 249 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/201 (22%), Positives = 85/201 (42%), Gaps = 3/201 (1%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 F N+ A + + F ++ L A + Y +AA+ E++ +P Sbjct: 42 FYASHNYEDAIAQWKKVKETFSSPELSTLVDLKIADAHFDNQSYIEAAAAYEDFRKLHPN 101 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + Y Y +G+ I + DQ K + +++Y S YV + + V Sbjct: 102 HEKAAYALYRLGLCNYNQISGIDTDQTPVKNAVNLFEAFLKQYPKSEYVAEVKDKLDVCI 161 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 + E+ +GR+YL+ +Y AA R + L Y +E +E + L +AY + Sbjct: 162 MKQIEYEIYVGRFYLRTEKYAAATKRLEEALLKYPKSEFHDETLFYLGKAYFLSGDKVKG 221 Query: 247 REVVSLIQERYPQGYWARYVE 267 RE +L+ ++Y ++Y+E Sbjct: 222 RETFNLLAKQYAS---SKYIE 239 >gi|251771637|gb|EES52212.1| DNA uptake lipoprotein-like protein [Leptospirillum ferrodiazotrophum] Length = 234 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/204 (23%), Positives = 83/204 (40%), Gaps = 5/204 (2%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-----YSAGKYQQAASLGEEYITQYPE 126 F K + N +D P K SA + Y G + +A + ++ +P Sbjct: 21 TFQKYNPFTNILPKDEPTHSFRTKVFGTSALLDEASRFYFKGDFIEARGEYKRFLELHPT 80 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + Y +GM I + D T+ L ++++ Y +SPYV+ A+ V R Sbjct: 81 HPLAAFAQYRIGMCDFYQIGGIDRDPSPTEKALADFQKVIDEYPDSPYVEKAQKKVAFCR 140 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 + A +G +Y + Y AA RF +L Y D++ A +A ++A Sbjct: 141 ERKARLHFYVGSFYYRTKFYKAAAYRFHSILLKYPDSKIYPRAQYNYAKALFHEKKREKA 200 Query: 247 REVVSLIQERYPQGYWARYVETLV 270 EV+ I + P +AR + L+ Sbjct: 201 AEVMRTIVAQSPGSTYARKAQILL 224 >gi|284105818|ref|ZP_06386222.1| DNA uptake lipoprotein-like protein [Candidatus Poribacteria sp. WGA-A3] gi|283830105|gb|EFC34371.1| DNA uptake lipoprotein-like protein [Candidatus Poribacteria sp. WGA-A3] Length = 329 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 1/126 (0%) Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Y Y + +S+ +MI+ + D K + ++ + S Y AR + + LA Sbjct: 96 YAQYRLALSHFKMIQTIDRDMTPVKKAQEEFWELIHGFPASQYEAEARVKIKECQGLLAK 155 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE-VV 250 +G++Y R +Y+AA RF+ ++ Y E A E+ L + Y L +D AR+ V Sbjct: 156 NHFFVGKFYYHREQYLAAAKRFEKIIIGYPSTEEAIESKLELAKTYQQLGALDWARDWAV 215 Query: 251 SLIQER 256 L+Q+ Sbjct: 216 ELVQQH 221 >gi|325955604|ref|YP_004239264.1| outer membrane assembly lipoprotein YfiO [Weeksella virosa DSM 16922] gi|323438222|gb|ADX68686.1| outer membrane assembly lipoprotein YfiO [Weeksella virosa DSM 16922] Length = 296 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 7/220 (3%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 +F +++ FLV S Y ++ + E++ A ++ + A E +N+ S Sbjct: 1 MFKKVSLTFLVATMLTSCNTQYNKAMKSSD-KDEIFSIANTLFEQGKYDLALELYNRIST 59 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 F A A Y+ Y+ + L + + YP + YL SY Sbjct: 60 SFVGTEKAADIAYNIAQANYNDENYRLSGHLFKNFAGTYPLDHRAEDALYLSAFSY---Y 116 Query: 146 RDVP---YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 +D P DQ +T + M + Y S +V A Y+ R +L K EI R Y K Sbjct: 117 KDSPRYNLDQTSTYNAIDEMQNFINTYPESEHVAQANEYIDELRGKLEKKAFEIARVYYK 176 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 +Y AA F ++ ++ D+++ EEAM + + LA+ Sbjct: 177 TMKYKAAGVAFDNMVDDFPDSKYREEAMLYSLRSKAELAM 216 >gi|150025880|ref|YP_001296706.1| lipoprotein [Flavobacterium psychrophilum JIP02/86] gi|149772421|emb|CAL43903.1| Probable lipoprotein [Flavobacterium psychrophilum JIP02/86] Length = 264 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 4/152 (2%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G+Y + E + YP+SKN + +L SY+++ DQ T + + Sbjct: 77 YKTGQYYLSGYQFESFAALYPKSKNTEEAAFLGAKSYSELSPTYSLDQTDTDKAINKLQN 136 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + +Y NS Y+ A V R +L K EI + Y ++ AI +A+Y Sbjct: 137 FINKYPNSKYLADANVVVKDLREKLEKKAFEIAKQYNTISDFKPAIKALDNFIADYPGTP 196 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256 + E+A+ + A LA+ V S +Q R Sbjct: 197 YKEKALFYKLNASYQLAI----NSVPSKMQAR 224 >gi|298504630|gb|ADI83353.1| outer membrane protein assembly lipoprotein YfiO, putative [Geobacter sulfurreducens KN400] Length = 254 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 62/149 (41%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A Q+ +G Y +AA+ EE+ +P + Y Y G+SY I DQ + Sbjct: 81 ADAQFDSGNYIEAAASYEEFRKLHPNHEKSAYALYRQGLSYFNQIHGFDTDQTPVSNTVT 140 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 + Y S Y + R + R E+ +G++Y + +Y +AI R + L Y Sbjct: 141 IFESFLRLYPQSEYAEEVRNKLDAARQNQVQYEIYVGQFYYRTEKYTSAIKRLEDALKRY 200 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREV 249 + +E + L +AY+ RE Sbjct: 201 PRSPLHDETLYYLGKAYIKAGDKAGGREA 229 >gi|261416538|ref|YP_003250221.1| outer membrane assembly lipoprotein YfiO [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372994|gb|ACX75739.1| outer membrane assembly lipoprotein YfiO [Fibrobacter succinogenes subsp. succinogenes S85] Length = 293 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 48/237 (20%), Positives = 102/237 (43%), Gaps = 5/237 (2%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 L+K L + F + + ++G S++ T + + YE A K + + +A Sbjct: 13 NLFKCTLFVPFFLYMATVMGCSTASTK-----KTTHTEWCKARYEAAEELFKAKKYGRAT 67 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E + +G ++ + A ++ ++ +A +I +P S + + Sbjct: 68 ERLEEILSTCAGSGYMEQAQFLLAESHFNLEQWIEARGEYGSFIVNFPGSPFAETAEFRK 127 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 +S M + D+ T ++ R + + N+P +Y + +++A KE + G Sbjct: 128 AVSSFNMDYRIDRDESNTTTAMKDFERYLANHPNTPLRDSVNYYYNLLVDRVAEKEFQTG 187 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 R YL+ + AA+ F+ L Y A+ +EA+ + +AY L + AR+ ++ Q Sbjct: 188 RLYLRMEKPQAAVIYFKEFLETYPKAQRRQEALFLISDAYTDLDQFESARQYLATAQ 244 >gi|329666231|pdb|3QKY|A Chain A, Crystal Structure Of Rhodothermus Marinus Bamd Length = 261 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 81/186 (43%), Gaps = 6/186 (3%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 E +E+A+ F + + +A EYF R +A A+ L A Y +Y AAS Sbjct: 17 EAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYL---ARAYYQNKEYLLAAS 73 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 E +I Y V Y M Y ++ DQ T+ ++ ++RY N V Sbjct: 74 EYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELV 133 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 A + R +LA K+ E R Y +R Y AA ++ V Y D A++A+ + Sbjct: 134 DDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMR 193 Query: 236 AYVALA 241 AY+A A Sbjct: 194 AYIAYA 199 >gi|71891967|ref|YP_277697.1| putative lipoprotein [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796073|gb|AAZ40824.1| putative lipoprotein [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 247 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 26/168 (15%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS- 163 Y + A + E + YP K+ DYV Y+ G+ + D K +++Y++ Sbjct: 81 YKLNDLKSANNYIEHFFKLYPNHKHFDYVLYMHGVINMCLDED-------NKKLIKYLNI 133 Query: 164 ------------------RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 R++ +Y +S Y A + +N++A E+ I ++Y K+ Sbjct: 134 NWFDRNPMYACIAFHTFVRLIRQYPDSQYSLDAYKRLIFLKNRVAEYELSIVKFYSKKHA 193 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 Y++ I R + +L ++ D + +A+ + +AY + L D+A +V +I Sbjct: 194 YISVIARVEKMLYHFPDTQATRKALYYMQQAYQNIYLPDQANKVAKII 241 >gi|297184481|gb|ADI20595.1| DNA uptake lipoprotein [uncultured gamma proteobacterium EBAC_27G05] Length = 272 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 13/204 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A ++ NF A E +PF A ++ + + G+ + + E++ Sbjct: 41 YDLAQRRMQANNFFSAIEALQAIESRYPFGRYAEQAQSELIYAYFMNGEDEASHEAAEKF 100 Query: 121 ITQYPESKNVDYVYYLVGMS--------YAQMIRD--VPYDQRATKLMLQYMSRIVERYT 170 I P N+DY Y++ G++ +A++ + D K +S + R+ Sbjct: 101 IRLNPRHPNIDYAYFMKGIASYTRDKGMFARVFKSDLSNRDISGAKQAFSELSEFLTRFP 160 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 S Y A + R+ +A E+ YY+KR YVAA+ R V+ N + A+ Sbjct: 161 QSQYAPYASQRLIYLRSLIAKSELVAADYYMKRKAYVAALRRANYVIENIPNTSETIRAL 220 Query: 231 ARLVEAYVALA---LMDEAREVVS 251 + + Y L LMD+ ++++ Sbjct: 221 KVVRDCYRELGYFKLMDDIQKIID 244 >gi|39995608|ref|NP_951559.1| putative lipoprotein [Geobacter sulfurreducens PCA] gi|39982371|gb|AAR33832.1| lipoprotein, putative [Geobacter sulfurreducens PCA] Length = 254 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/149 (24%), Positives = 62/149 (41%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A Q+ +G Y +AA+ EE+ +P + Y Y G+SY I DQ + Sbjct: 81 ADAQFDSGNYIEAAASYEEFRKLHPNHEKSAYALYRQGLSYFNQIHGFDTDQTPVSNTVT 140 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 + Y S + + R + R E+ +G++Y + +Y +AI R + L Y Sbjct: 141 IFESFLRLYPQSEHAEEVRNKLDAARQNQVQYEIYVGQFYYRTEKYTSAIKRLEDALKRY 200 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREV 249 + +E + L +AY+ RE Sbjct: 201 PRSPLHDETLYYLGKAYIKAGDKAGGREA 229 >gi|320355040|ref|YP_004196379.1| outer membrane assembly lipoprotein YfiO [Desulfobulbus propionicus DSM 2032] gi|320123542|gb|ADW19088.1| outer membrane assembly lipoprotein YfiO [Desulfobulbus propionicus DSM 2032] Length = 291 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 76/162 (46%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 ++ +A + F + PF+ A + L +A Y +Y +A +L + + ++P ++ + Sbjct: 69 DYGEAIKNFKIILDEHPFSAQAMLAELKAADANYYNKQYAEAKTLYKSFEERHPTNEAIP 128 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 YV + VGM + + D + ++ +R++ Y SPY K A+ + + L Sbjct: 129 YVMFQVGMCDYRRSDRIDRDASGPQEAIKSFTRLINAYPQSPYAKEAKAKIIECKEFLVN 188 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 E + +Y++ A R + +LA Y D+ A +A A L Sbjct: 189 HEYMVAVFYVRTDRQEEAKHRLKYLLAMYPDSNLAPQAKALL 230 >gi|325281824|ref|YP_004254366.1| outer membrane assembly lipoprotein YfiO [Odoribacter splanchnicus DSM 20712] gi|324313633|gb|ADY34186.1| outer membrane assembly lipoprotein YfiO [Odoribacter splanchnicus DSM 20712] Length = 266 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 10/220 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 VY+KA+ + + ++ +A + F A+ AF Y+ YQ A+ L ++ Sbjct: 32 VYKKAIEYYNKGDYQRAMNLLDGVRSVFVGQAKAQNIAYYRAFCSYNMKDYQIASDLFKQ 91 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I YPES + Y++G + DQ+ T+ ++ + RY S Sbjct: 92 FIQTYPESSFAEECLYMMGFCDYKASPKPRLDQQVTEKAIREFQLYLSRYPYSMRKDKVN 151 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 Y+ R++L+ K + Y R Y AA+ Q L +Y +++ EE M L + Sbjct: 152 TYMDEMRDKLSYKAYLSAKNYYLREHYKAAVISLQNCLKDYPGSKYREEIMYMLFVSKYQ 211 Query: 240 LALM----------DEAREVVSLIQERYPQGYWARYVETL 269 +A+ + ARE + YP +A V+ + Sbjct: 212 MAVNSVEDKKVERYNNAREEYYYFADEYPNSRYAADVKKM 251 >gi|91202470|emb|CAJ72109.1| hypothetical protein kustd1364 [Candidatus Kuenenia stuttgartiensis] Length = 308 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 9/195 (4%) Query: 45 DVYLDSVTDVRYQREVYEKAV---LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 D L + +EV+EK + E + + A F + + P +A +S + A Sbjct: 107 DTVLREYPGTKRTKEVHEKVFQVGIAQMEMDENAAIRVFEKIIENHPMGPIAPESQIKIA 166 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + G Y+ A ++++ YP ++ + YV Y + +S + +R L++ Sbjct: 167 DCYFKLGYYEDAVDAYKKFMESYPRNEWIPYVQYQIPLSKFYFEKQ---QERNYGLLVSA 223 Query: 162 MSRIVERYTNSP---YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 E +P YV+ A + R A +E EIG +YL+R +A F+ V+ Sbjct: 224 REGFEEYLVTNPHGVYVEDASRMIEEIRVIEARREFEIGEFYLRRKTPSSASIYFKYVIK 283 Query: 219 NYSDAEHAEEAMARL 233 ++ D AE AM RL Sbjct: 284 DFPDTIWAERAMERL 298 >gi|289806131|ref|ZP_06536760.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 138 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 47/91 (51%) Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 S++V Y NS Y A + +++LA E + YY RG +VA + R + +L NY D Sbjct: 41 SKLVRSYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPD 100 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +A+ + AY + L +A +V +I Sbjct: 101 TQATRDALPLMENAYRQMQLNAQADKVAKII 131 >gi|213423524|ref|ZP_03356504.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 112 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 47/91 (51%) Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 S++V Y NS Y A + +++LA E + YY RG +VA + R + +L NY D Sbjct: 15 SKLVRSYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPD 74 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +A+ + AY + L +A +V +I Sbjct: 75 TQATRDALPLMENAYRQMQLNAQADKVAKII 105 >gi|302036223|ref|YP_003796545.1| hypothetical protein NIDE0853 [Candidatus Nitrospira defluvii] gi|300604287|emb|CBK40619.1| protein of unknown function, TPR-like [Candidatus Nitrospira defluvii] Length = 306 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 59/128 (46%) Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Y + S+ +M + + D + + ++ + + S Y A + + LA Sbjct: 95 YAQLRLAESHLRMAKSIDRDPEPIQKAIASFEKLRKEFPGSKYEAQALQRIADCHDWLAQ 154 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 + +G++Y +R Y+AA RF ++ +Y D + A EA+ L Y L D A E + Sbjct: 155 THLFVGQFYYRRASYLAAAHRFDQIMKDYPDKKVAPEALYYLALTYQELGADDWAMEKLQ 214 Query: 252 LIQERYPQ 259 L+ E+YP Sbjct: 215 LLAEKYPN 222 >gi|9971938|gb|AAG10500.1|AF279106_62 predicted secreted lipoprotein [uncultured marine gamma proteobacterium EBAC31A08] Length = 272 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 45/207 (21%), Positives = 93/207 (44%), Gaps = 17/207 (8%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y++A + +N+ A + +PF A ++ + + Q+ + + A + E++ Sbjct: 38 YDQAQRRMAGKNYFGAIDSLEAIESRYPFGKYAEQAQVELIYAQFMNAETEAAHAAAEKF 97 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY------------MSRIVER 168 I +P N+DY Y++ G+S RD + R T L ++ + R Sbjct: 98 IRLHPRHPNIDYAYFMKGLS--SYTRDNSFIVRMTDTDLSNRDISGAKESFSELTEFLTR 155 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + +S Y A+ RN +A E+ YY+ ++AAI R V+ N ++ Sbjct: 156 FPDSQYSTYAKQRNIYLRNMIARNELAAADYYVSVDAHIAAIRRANYVIENIPNSSENYR 215 Query: 229 AMARLVEAYVALA---LMDEAREVVSL 252 A+ L +Y +L L+++ ++++S+ Sbjct: 216 ALKILEASYESLGYIELLEDTKKIISI 242 >gi|213622690|ref|ZP_03375473.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 116 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 47/91 (51%) Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 S++V Y NS Y A + +++LA E + YY RG +VA + R + +L NY D Sbjct: 19 SKLVRSYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPD 78 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +A+ + AY + L +A +V +I Sbjct: 79 TQATRDALPLMENAYRQMQLNAQADKVAKII 109 >gi|228472533|ref|ZP_04057293.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga gingivalis ATCC 33624] gi|228275946|gb|EEK14702.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga gingivalis ATCC 33624] Length = 264 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 61/143 (42%), Gaps = 1/143 (0%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 +L M A Y KY A E ++ YP S+ + V +L G DQ AT Sbjct: 70 ALYMYADSFYKRKKYLLAGYQYERFLKNYPRSEKAEEVLFLQGKCNFLESPKYSLDQDAT 129 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 L + ++RY N Y++ A V N+L K EI + Y K +Y AAI F Sbjct: 130 YKALDQLQEYIDRYPNGAYLREANNMVLELLNKLQHKSFEIAKGYDKIRDYQAAIKSFDN 189 Query: 216 VLANYSDAEHAEEAM-ARLVEAY 237 L + EEAM RL AY Sbjct: 190 FLVENPGSTFREEAMYYRLHSAY 212 >gi|206603307|gb|EDZ39787.1| Probable DNA uptake lipoprotein [Leptospirillum sp. Group II '5-way CG'] Length = 243 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/175 (21%), Positives = 76/175 (43%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 +LL A Y G + +A + ++ +P + Y +GM I V D Sbjct: 55 ALLDEASRFYFKGDFIEARGEYKRFLELHPTHPLAAFAQYRMGMCDYYQILSVDRDPTPV 114 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + L ++++ + +S YV A+ + V R++L+ +G +Y K + AA RF Sbjct: 115 RKALADFQKVIDEFPDSSYVGKAQKKIAVCRDRLSRVHFYVGYFYYKTKRFKAASYRFHT 174 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 +L Y D+ + A + L +A ++ + +++P+ +AR L+ Sbjct: 175 ILLKYPDSRKYDRAEFYFALSKFHLKQRHQAVRLLKRLIQQFPKSKYARKSSILL 229 >gi|124516467|gb|EAY57975.1| probable DNA uptake lipoprotein [Leptospirillum rubarum] Length = 243 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/175 (21%), Positives = 76/175 (43%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 +LL A Y G + +A + ++ +P + Y +GM I V D Sbjct: 55 ALLDEASRFYFKGDFIEARGEYKRFLELHPTHPLAAFAQYRMGMCDYYQILSVDRDPTPV 114 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + L ++++ + +S YV A+ + + R++L+ +G +Y K + AA RF Sbjct: 115 RKALSDFQKVIDEFPDSNYVGKAQKKIAICRDRLSRVHFYVGYFYYKTKRFKAASYRFHT 174 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 +L Y D+ + A + L +A ++ + +++P+ +AR L+ Sbjct: 175 ILLKYPDSRKYDRAEFYFALSKFHLKQRHQAVHLLKRLIQQFPKSKYARKSSILL 229 >gi|218960399|ref|YP_001740174.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] gi|167729056|emb|CAO79967.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] Length = 244 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/160 (20%), Positives = 74/160 (46%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++ K+ A + +++I +P+ +NV Y+ +G+ + YDQ T ++ Sbjct: 74 FNMNKFSDARAKYQQFINSFPDHENVADAYFRIGVCLFEESLPPQYDQTETIKCIEAFQT 133 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 ++RY N P A Y+ + +L K+ G Y K +Y +A+ F +++ ++ E Sbjct: 134 FIDRYPNDPRYVQAVDYIHKCQYKLLEKQYLTGYIYYKMKDYSSALMYFDEIVSLGNNDE 193 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 +++ + ++ D+A+ ++ RYP A+ Sbjct: 194 LDRQSLYYSAKLHLHQKNYDKAKASYERLKNRYPDSKEAK 233 >gi|78224207|ref|YP_385954.1| putative lipoprotein [Geobacter metallireducens GS-15] gi|78195462|gb|ABB33229.1| lipoprotein, putative [Geobacter metallireducens GS-15] Length = 249 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/141 (25%), Positives = 61/141 (43%) Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 L A Q++ Y +AA+ EE+ +P + Y Y +S + I + DQ Sbjct: 73 LKIADAQFADKSYIEAAASYEEFRKLHPNHEKAPYALYRQALSQYEQITGIDTDQTPVSN 132 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + + Y +S Y R + V R + E+ +GR+Y + +Y AAI R + L Sbjct: 133 AVTLFESFLRIYPSSEYAAEVRDKLEVCRLKQVEHEIYVGRFYYRTDQYGAAIKRLEDAL 192 Query: 218 ANYSDAEHAEEAMARLVEAYV 238 Y + +E + L AY+ Sbjct: 193 KKYPRSPAHDETLFYLGSAYI 213 >gi|94676731|ref|YP_588649.1| hypothetical protein BCI_0192 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219881|gb|ABF14040.1| conserved hypothetical protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 231 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 25/215 (11%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 S+++V+LD + E Y A L++ + +A + + F ++ L Sbjct: 21 SNQNVFLDHLP-----AETYASARQKLQQGYYKQAIKQLEALDNYYMFGPNTQQLQLDLI 75 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM----------------SYAQMI 145 + Y Q+A +L + ++ N DYV Y+ G+ + Sbjct: 76 YAYYKLSNMQKAQNLIDRFLRTNANHSNTDYVLYICGLIEMKLDEQALSKYFLFGFNHFE 135 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 RD P RA + Q +++ Y +S Y A+ + +N+LA E+ + +Y K G Sbjct: 136 RD-PKHARAAVISFQ---QLINNYPHSIYAIDAKKILIYLQNRLANYELTVIEFYSKVGA 191 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 YVA + R + +L+N+ + +A + AY L Sbjct: 192 YVAVVTRVKHMLSNFPNNNATYQARKHMERAYQQL 226 >gi|326799177|ref|YP_004316996.1| outer membrane assembly lipoprotein YfiO [Sphingobacterium sp. 21] gi|326549941|gb|ADZ78326.1| outer membrane assembly lipoprotein YfiO [Sphingobacterium sp. 21] Length = 298 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 57/230 (24%), Positives = 92/230 (40%), Gaps = 28/230 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGE 118 Y +A+ + +SKA F S + G LM A+ Y Y A + Sbjct: 33 YREAINLYNNKKYSKALILFEDLSNKY--RGRPENEELMYYFAYTNYRLRDYTSARFHFK 90 Query: 119 EYITQYPESKNVD-------YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + QYP+S+ + Y YYL Y DQ T ++ + + Y Sbjct: 91 NFTDQYPQSQRAEECRFMGAYCYYLESPVYT-------LDQENTLKAIESLQLFINLYPK 143 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 S + A ++ R++L K + YL G+Y AA+ FQ L +Y D ++AEE Sbjct: 144 SDRAEEAAKFIQDLRDKLEHKSYANAKLYLDVGDYKAAVIAFQNSLRDYPDTKYAEEMEY 203 Query: 232 RLVEA---YVALALM-------DEAREVVSLIQERYPQGYWARYVETLVK 271 +EA Y + + EA E + + YP+ + + E+L K Sbjct: 204 LAIEAQYLYAKNSQLPSQEARYQEAVEFSNRFIDNYPESKYKKDAESLKK 253 >gi|262197816|ref|YP_003269025.1| outer membrane assembly lipoprotein YfiO [Haliangium ochraceum DSM 14365] gi|262081163|gb|ACY17132.1| outer membrane assembly lipoprotein YfiO [Haliangium ochraceum DSM 14365] Length = 261 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 49/212 (23%), Positives = 102/212 (48%), Gaps = 10/212 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++ Y K +L L+E+++ A +YF + FP++ A + L A ++ A Y QA Sbjct: 34 QQNYSKGMLELEEKDWIAAVKYFAFVKQRFPYSKYAVLAELRMADAEFGAEHYLQAVDAF 93 Query: 118 EEYITQYPESKNV--DYVYYLVGMSYAQMIRDVPY--------DQRATKLMLQYMSRIVE 167 + +I +P + V Y + VG +Y +++ D + D +T + ++ ++ Sbjct: 94 KLFIKFHPTHEQVVDGYAAFRVGAAYYELLPDDMWILPPSYEKDPSSTYDAERELATFLK 153 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 +Y +S Y + A+ + LAA E + ++Y R + + + R + +L Y+ Sbjct: 154 KYPDSAYHEEAKEMLAAVHAHLAAHEWYVAKFYWDREKPMGTVLRLRRLLDRYAGTRFDG 213 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +A+ L AY+ + + + ARE + E++P Sbjct: 214 DALWLLGSAYMKVDMPERAREAWQTLIEQHPD 245 >gi|256425917|ref|YP_003126570.1| outer membrane assembly lipoprotein YfiO [Chitinophaga pinensis DSM 2588] gi|256040825|gb|ACU64369.1| outer membrane assembly lipoprotein YfiO [Chitinophaga pinensis DSM 2588] Length = 302 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/137 (23%), Positives = 55/137 (40%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + Y Y QA + Y+ +P S + Y+ Y + V DQ T+ + Sbjct: 77 CYCSYKMKDYVQAGFYFKNYLDNFPNSPRATEMDYMQAYCYYKQSPKVALDQTNTQKAIA 136 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 M + Y S V A + + R +L KE Y G Y AA F+ ++ N+ Sbjct: 137 AMQTFINNYPTSDKVPEANLVIELSRRKLEKKEYNNAELYYNLGHYQAAAITFKSLMRNF 196 Query: 221 SDAEHAEEAMARLVEAY 237 D++ ++ ++AY Sbjct: 197 PDSDKSDSYKYMAIKAY 213 >gi|189502538|ref|YP_001958255.1| hypothetical protein Aasi_1196 [Candidatus Amoebophilus asiaticus 5a2] gi|189497979|gb|ACE06526.1| hypothetical protein Aasi_1196 [Candidatus Amoebophilus asiaticus 5a2] Length = 267 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 4/160 (2%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLG----EEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 RK ++ + F Q A YQ++ + E + YP + Y+ G S I D+ Sbjct: 60 GRKEIIPAQFYQAYAYFYQKSYKMSAYCFESFYKTYPRLAQAEEALYMQGYSLYLSIPDI 119 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 DQ T+ L+ + + +Y + Y + A Y +N+L K + + Y + G Y A Sbjct: 120 RLDQAVTEKALKTLQTYLNKYPSGTYQQEAHQYNDELQNKLMLKSFKAAKLYYELGHYKA 179 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 A+ Y ++ + EEA+ ++A AL E +E Sbjct: 180 AVIALGNFREKYPESIYQEEALCLQIQAQYKWALGSEVKE 219 >gi|114321550|ref|YP_743233.1| DNA uptake lipoprotein-like protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227944|gb|ABI57743.1| DNA uptake lipoprotein-like protein [Alkalilimnicola ehrlichii MLHE-1] Length = 245 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 18/212 (8%) Query: 59 EVYEKAVLFLKEQNFSKAYEYF------NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 E Y V L E + + A E F + SR AG AR L A++ Y AG+ Sbjct: 35 EQYRAGVAALDEDDRAAARERFEALIERHATSR---HAGQARAEL---AWLHYRAGELDA 88 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQ-----MIRDVPYDQRATKLMLQYMSRIVE 167 A +P+ ++ Y Y+ M+ Q + R P DQR + +V+ Sbjct: 89 AREQASRMAETHPDHPSLPYALYVAAMAAEQQWEDSLARGEP-DQRLARRAFADYRAVVD 147 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 + A ++ R +A E+++ R L+ G A+ R + V +Y +E Sbjct: 148 LDAEDRHAGLALEAMSALREAIARHELDLARTRLEDGAADEALDRARYVGEHYPRSETLG 207 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +AMA + A +L D+A EV +++ P Sbjct: 208 DAMALQINALESLGEQDKAGEVRRMLRLHQPD 239 >gi|163757156|ref|ZP_02164258.1| hypothetical protein KAOT1_00785 [Kordia algicida OT-1] gi|161322884|gb|EDP94231.1| hypothetical protein KAOT1_00785 [Kordia algicida OT-1] Length = 1012 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 45/220 (20%), Positives = 100/220 (45%), Gaps = 22/220 (10%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +YE ++ E+ K + + + ++P + K++L + Y++GK Q A + Sbjct: 614 LYELGNTYINEEKTVKGLDTYAKMVSEYPKSSYVPKTILKQGLINYNSGKNQVALTKFRS 673 Query: 120 YITQYPESK-------NVDYVYYLVGM--SYAQMIRDVPYDQRATKLMLQYMS------R 164 ++++P ++ +Y +G YA ++D+ + T + L + + Sbjct: 674 VVSKFPNTEEAIQAVATAKLIYIELGQVEVYANWVKDLDF-VDVTNVELDKATYESAEKQ 732 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IGRYYLKRGEYVAAIPRFQLVLANYSD 222 ++ T+ ++G Y+ N L A + + + Y +GE IP ++ VL N Sbjct: 733 FIQNNTDKA-IEGFEKYINQFPNGLNAVKANFYLAQSYFSKGETQKTIPHYEYVLQN-EG 790 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQER--YPQG 260 +E+ E+A+ARL + ++ +A V+ ++E +PQ Sbjct: 791 SEYTEQALARLSQVFLETDNYTKAIPVLKRLEESADFPQN 830 >gi|213026854|ref|ZP_03341301.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 93 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 43/85 (50%) Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA E + YY RG +VA + R + +L NY D + + Sbjct: 2 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRD 61 Query: 229 AMARLVEAYVALALMDEAREVVSLI 253 A+ + AY + L +A +V +I Sbjct: 62 ALPLMENAYRQMQLNAQADKVAKII 86 >gi|254446643|ref|ZP_05060119.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] gi|198260951|gb|EDY85259.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] Length = 369 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 7/205 (3%) Query: 59 EVYEKAVLFLKE--QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 E + +LF+ +N +A +YF + P++ A SL+ A Sbjct: 152 ETHRDKILFVIPGFKNTDRAVQYFERIVAIAPYSDYAPLSLMNVAKAWSDKNSDSMTIYA 211 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + +T YP S Y + ++ +I+ YDQRAT+ + + + +Y + +V Sbjct: 212 LDRLVTNYPNSFLTSDAYLKLAQTHYGLIKGPEYDQRATEDAITFFEDFLIQYPENLHVD 271 Query: 177 GARFYVTVGRNQLAAKEVEIGR-YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 A ++ +N L+ +V++ YY KR +Y AA + + + AE A RL + Sbjct: 272 QAETGLSGAKNILSMSKVKMADFYYYKRSKYDAAKILYNEAITIAPRSTAAELARTRLEK 331 Query: 236 AYVALALMDE----AREVVSLIQER 256 +A DE + IQER Sbjct: 332 IDTIVAQSDETLTDSTPTNEQIQER 356 >gi|268317073|ref|YP_003290792.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM 4252] gi|262334607|gb|ACY48404.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM 4252] Length = 1000 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 23/190 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++KA L ++QN++ A E F + R P A +L +A Y G+ +A +L + Sbjct: 438 AFQKAWLQYRQQNYAAASEAFLELYRQDPRGPKAGDALFWAAESFYQLGRLDRAEALFRD 497 Query: 120 YITQYPESKNVDYVYYLVG-------------MSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y+ +P+ +V+ +Y +G ++ Q +R + A L + R+ Sbjct: 498 YLRSFPDGAHVEAAHYALGWVYFRQQRYEAAIQAFQQFLRAYRRTEEAVPYRLDALLRLA 557 Query: 167 ER-YTNSPYVKGARFYVTVGRNQLAAKEVE-----IGRYYLKRGEYVAAIPRFQLVLANY 220 + Y Y + R+Y R A E + IG+ Y G Y A+ F +L + Sbjct: 558 DSYYALKRYPEAIRYY----RQAAAEGESDYALYQIGQAYYNAGNYEEALRTFNRLLEEH 613 Query: 221 SDAEHAEEAM 230 ++ EEA+ Sbjct: 614 PESTWREEAL 623 >gi|325295382|ref|YP_004281896.1| tol-pal system protein YbgF [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065830|gb|ADY73837.1| tol-pal system protein YbgF [Desulfurobacterium thermolithotrophum DSM 11699] Length = 242 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 22/144 (15%) Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 V+ K L AF AG + A S E+ + QYP+S D Y +G Y Y Sbjct: 118 VSDKDLYKQAFNSMEAGDLETAKSTFEKLVEQYPDSPLADNALYWIGEIY--------YS 169 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + Y +++E+Y N N++ A +++ Y GE A Sbjct: 170 HNDYETAANYFKQVIEKYPNG--------------NKVPAAMLKLALSYKGMGELDKAKE 215 Query: 212 RFQLVLANYSDAEHAEEAMARLVE 235 FQ V+ Y + A A A+L+E Sbjct: 216 MFQQVIEKYPNTPEAGIAKAKLME 239 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 14/95 (14%) Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 ++VE+Y +SP A ++ IG Y +Y A F+ V+ Y + Sbjct: 145 KLVEQYPDSPLADNALYW--------------IGEIYYSHNDYETAANYFKQVIEKYPNG 190 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 AM +L +Y + +D+A+E+ + E+YP Sbjct: 191 NKVPAAMLKLALSYKGMGELDKAKEMFQQVIEKYP 225 >gi|301168517|emb|CBW28107.1| putative comtepence-related protein [Bacteriovorax marinus SJ] Length = 245 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 42/179 (23%), Positives = 84/179 (46%), Gaps = 2/179 (1%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++++A + + + A E N +P++ A + L+ A V + Y +AA+ Sbjct: 29 LFKEAQDLINDSRYILATEKLNTLRSQYPYSFYATHAELLQADVLFKQENYVEAAAAYIL 88 Query: 120 YITQYPESKNVDYVYYLVGMS-YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + +P+ K YV + + S YAQ+ D A ++Y ++ +++S Y KG+ Sbjct: 89 FKDFHPKHKKKAYVIWKIAESFYAQIPDTFDRDLSAAHEAVKYYQELLNFHSDSEYSKGS 148 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY-SDAEHAEEAMARLVEA 236 + + + + KE IG +Y K + AA R+ ++ + SD +M R+VE+ Sbjct: 149 IDKIKLAQGMILDKERYIGDFYYKTNVFDAARYRYLSIIDRFKSDPMLLAHSMIRVVES 207 >gi|163782371|ref|ZP_02177369.1| hypothetical protein HG1285_06275 [Hydrogenivirga sp. 128-5-R1-1] gi|159882404|gb|EDP75910.1| hypothetical protein HG1285_06275 [Hydrogenivirga sp. 128-5-R1-1] Length = 307 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 2/165 (1%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSR--DFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 +E Y +A+ KE+++ A FN+ + D+ + + A Y G Y A Sbjct: 33 QEYYREALSAYKEKDYGDAAWNFNEALKYMDYLTPKQIENAKFLLAKSYYYDGDYVNAVV 92 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 E+YI YP+ + + +YL+ SY + D DQ T ++ + R+ NS + Sbjct: 93 ALEDYIFYYPKLRRTEEAFYLLIDSYINVSPDPYRDQEYTWKAIEKAKEFLSRFPNSTFA 152 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 + + ++A E+ I ++Y G +A R++ VL N+ Sbjct: 153 PKVQKLIDKAYRKIAQHELYIAKFYEDYGYTYSAALRYREVLINF 197 >gi|295135083|ref|YP_003585759.1| nuclear transition protein [Zunongwangia profunda SM-A87] gi|294983098|gb|ADF53563.1| nuclear transition protein [Zunongwangia profunda SM-A87] Length = 281 Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 10/158 (6%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G Y ++ E ++ YP S V+ + SY + DQ T ++ + Sbjct: 89 YQVGDYYLSSFEFERFVQSYPNSDKVEEASFKSAKSYYEESPRFDLDQTDTNKAIEALQS 148 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY------LKRGEYVAAIPRFQLVLA 218 + RY Y + A T R +L K EI + Y + G + AAI F +A Sbjct: 149 YLNRYPEGEYAEEANLMATELRLKLEKKAFEIAKQYWRIGGNYREGNFTAAITSFNNFIA 208 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +Y + EEA +A + A+ +L+QER Sbjct: 209 DYPGTPYREEAFYLRFDAAYSYAI----NSYRNLMQER 242 >gi|326334355|ref|ZP_08200568.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693439|gb|EGD35365.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 266 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 57/138 (41%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 ++L M A Y KY AA E + YP S+ + V +L G Y DQ Sbjct: 69 GEEALYMYADSYYKRKKYLLAAYQYERFTKNYPRSEKAEQVLFLQGKCYFLESPKYSLDQ 128 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 T L + ++RY NS ++ A V +L K EI + Y K +Y AAI Sbjct: 129 EGTYKALDALQEYIDRYPNSENLREANNMVLELLTKLQRKSFEIAKGYDKIRDYQAAIKS 188 Query: 213 FQLVLANYSDAEHAEEAM 230 F L + EEA+ Sbjct: 189 FDNFLIENPGSVFREEAL 206 >gi|288818733|ref|YP_003433081.1| DNA uptake lipoprotein [Hydrogenobacter thermophilus TK-6] gi|288788133|dbj|BAI69880.1| DNA uptake lipoprotein [Hydrogenobacter thermophilus TK-6] gi|308752320|gb|ADO45803.1| outer membrane assembly lipoprotein YfiO [Hydrogenobacter thermophilus TK-6] Length = 298 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 56/118 (47%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y Y A E+++ YP+ + Y+++ SY ++ D DQ T + + Sbjct: 78 YMNKDYINAVVYFEDFLFYYPDVSESEKAYFMLVDSYMKVAPDPYRDQTYTLKAIDKVKD 137 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + ++ SPY + R + + +LA E IGR+Y G Y +A R++ +L NY + Sbjct: 138 FLSKFPQSPYAERVRAIMEDAQRKLARHEYLIGRFYEDFGYYYSASLRYRDLLINYPE 195 >gi|225850549|ref|YP_002730783.1| hypothetical protein PERMA_0997 [Persephonella marina EX-H1] gi|225646376|gb|ACO04562.1| conserved hypothetical protein [Persephonella marina EX-H1] Length = 300 Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust. Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 23/215 (10%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQ 112 +++V K + K+ ++ +A + + + G+ L+ + F Y +Y Sbjct: 23 EKDVLHKGIQLYKKGDYEEAKDLLKKSI--YKVKGLTADELMKARFYLADSYYREEQYVD 80 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----RDVPYDQRATKLMLQYMSRIVER 168 A EE IT +P + +D Y + SY ++ RD+ Y ++A L+ ++E Sbjct: 81 AIVEFEELITLFPTAPFMDEALYKLADSYLKISPGVDRDMSYPEKA----LEKAEELIEN 136 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y +S Y A+ + A +EI + Y K G+Y +A +QL Y D ++ Sbjct: 137 YPDSKYAAKAKKIIHTVNKMKADHILEIAQLYEKLGKYYSASRYYQLAYDQYED--FIDK 194 Query: 229 AMARLVEAYVALAL-------MDEAREVVSLIQER 256 AY + MDE +E++S IQE+ Sbjct: 195 PFVEFKLAYNLMKTENQYKDEMDEYKEMISDIQEK 229 >gi|77918025|ref|YP_355840.1| hypothetical protein Pcar_0410 [Pelobacter carbinolicus DSM 2380] gi|77544108|gb|ABA87670.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380] Length = 222 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 37/69 (53%) Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 +G Y G+Y A+ FQ V+ NY + A EA+ R+ A L ++AR+ + +Q+ Sbjct: 148 LGECYYNLGQYDRAVQEFQKVVDNYPLSGKAPEALLRMAPALRQLNQYEKARQALQALQQ 207 Query: 256 RYPQGYWAR 264 RYP AR Sbjct: 208 RYPNSAAAR 216 >gi|145641510|ref|ZP_01797088.1| conserved hypothetical lipoprotein [Haemophilus influenzae R3021] gi|145273801|gb|EDK13669.1| conserved hypothetical lipoprotein [Haemophilus influenzae 22.4-21] Length = 129 Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 6/100 (6%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S+DV SV E+Y K L+E ++S+A Y + FP + +++L + Sbjct: 23 SKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQAMLDLIY 76 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 Y Y Q + + ++ Q+P+S N Y Y+ G++ A Sbjct: 77 ANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNA 116 >gi|291288282|ref|YP_003505098.1| outer membrane assembly lipoprotein YfiO [Denitrovibrio acetiphilus DSM 12809] gi|290885442|gb|ADD69142.1| outer membrane assembly lipoprotein YfiO [Denitrovibrio acetiphilus DSM 12809] Length = 259 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 83/177 (46%), Gaps = 10/177 (5%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E + + + K+ N+ KA YF + +A K+ L A + KY +A E Sbjct: 30 ESMKTGMTYFKKGNYEKAVTYFENTLMEAETPEMAAKAQLFLADSYFLDKKYVEAIPAYE 89 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 ++ Y E+++ + +G+S+ I + D A + L +++ ++ SP A Sbjct: 90 LFLEIYGETEDANTAMLRLGLSHYAQIDTIDRDMSAAEGALNAFTKLRDK---SPAF--A 144 Query: 179 RFY-----VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 R + + R+ LA +E+ + ++Y + E +A R + +++NYSD +EA+ Sbjct: 145 REFELNKKIVELRSMLAERELYVAKFYFRIKEPDSAEGRLKYLISNYSDTASYDEAL 201 >gi|149372318|ref|ZP_01891506.1| TPR repeat protein [unidentified eubacterium SCB49] gi|149354708|gb|EDM43271.1| TPR repeat protein [unidentified eubacterium SCB49] Length = 266 Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 4/164 (2%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 +K + + A Y+ G Y + E + YP+S +V + SY ++ DQ Sbjct: 65 GQKLMFLYANAYYNLGDYTLSGYQFERFTISYPKSDSVVVAAFRGAKSYYELSPVYSLDQ 124 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 T L+ + + Y ++ A V+ R++L K EI YL+ +Y AAI Sbjct: 125 ADTNKALEKLQGFINNYPDADQRVEANEMVSDLRSKLDYKAFEIAEQYLRISDYKAAISA 184 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 + +AN+ +E+ ++A ++A LA+ +L++ER Sbjct: 185 YDNFIANHPGSEYRKDAFYGRLKASYELAI----NSFPALVEER 224 >gi|126661830|ref|ZP_01732829.1| TPR repeat protein [Flavobacteria bacterium BAL38] gi|126625209|gb|EAZ95898.1| TPR repeat protein [Flavobacteria bacterium BAL38] Length = 264 Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 1/134 (0%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y + +Y A E ++ YP+S+ + + + ++ DQ T L M Sbjct: 77 YKSNQYYLAGYQLENFVATYPKSEKREESAFYAAECFYKLSPKYSLDQTDTSKALDKMQH 136 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 ++ Y +S ++ A YV R +L K EI + Y +Y A+ + LA+Y Sbjct: 137 FIDVYPDSQFLTQANVYVKELREKLEKKAFEIAKQYNTISDYKGALKALENFLADYPGTP 196 Query: 225 HAEEAM-ARLVEAY 237 E+A+ RL AY Sbjct: 197 FKEQALYYRLDSAY 210 >gi|213585273|ref|ZP_03367099.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 99 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 39/80 (48%) Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D + + S++V Y NS Y A + +++LA E + YY RG +VA + Sbjct: 15 DPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVV 74 Query: 211 PRFQLVLANYSDAEHAEEAM 230 R + +L NY D + +A+ Sbjct: 75 NRVEGMLRNYPDTQATRDAL 94 >gi|255038956|ref|YP_003089577.1| outer membrane assembly lipoprotein YfiO [Dyadobacter fermentans DSM 18053] gi|254951712|gb|ACT96412.1| outer membrane assembly lipoprotein YfiO [Dyadobacter fermentans DSM 18053] Length = 320 Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 21/187 (11%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD-VPY--DQRATKL 157 A+ QY G+Y + L +++ Y S DY + M + +D PY DQ +T Sbjct: 91 AYTQYHQGQYNTSQFLFKKFYDTYARS---DYAQEALYMHAFSLYKDSSPYNLDQSSTFT 147 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY-----VAAIPR 212 + M + Y +SP+ + Y+ R++L K E R Y K ++ +A+ Sbjct: 148 AISAMQDFINAYPDSPFREECTRYILELRSKLEKKAYERARLYHKISDFNPMSLKSAVIS 207 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAR----EVVSLIQE---RYPQGYW 262 + ++ D+++ EE VE+ LA +D+ + EVV QE +YP G + Sbjct: 208 IENFRKDFPDSQYNEELAFLKVESQYNLASNSFIDKQKERYQEVVKFYQELVDKYPTGKY 267 Query: 263 ARYVETL 269 R E + Sbjct: 268 NRDAERM 274 >gi|322421378|ref|YP_004200601.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. M18] gi|320127765|gb|ADW15325.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. M18] Length = 260 Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust. Identities = 39/188 (20%), Positives = 78/188 (41%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 ++F +A F + + ++ ++ L A + + +AA+ E + +P ++ V Sbjct: 45 RHFEEAITQFKKVKESYSSPELSAQAELKIADAYFENDAFIEAAAEYESFRKLHPTNEKV 104 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 Y Y +S I + DQ K + Y+ + +Y S + AR ++ R + Sbjct: 105 PYALYRQALSNYSQITGIDTDQTPVKNAVHYLEMFLAQYPGSEHAADARAKLSDCRAKEL 164 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 A E +G +Y++ +Y +AI R L + + ++ L +AY A E Sbjct: 165 AYENYVGNFYVRTKKYPSAIKRLNEALERFPGEPGLADTLSYLEQAYRKSGDAARAEEAR 224 Query: 251 SLIQERYP 258 + YP Sbjct: 225 KRLAAEYP 232 >gi|163756996|ref|ZP_02164102.1| lipoprotein protein, putative [Kordia algicida OT-1] gi|161323000|gb|EDP94343.1| lipoprotein protein, putative [Kordia algicida OT-1] Length = 264 Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 6/154 (3%) Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E ++ YP+S ++ + SY DQR T + + + Y +S Y+ Sbjct: 90 ERFVRSYPKSDSIQSAAFYEAKSYYMESPRYSIDQRETIKAINKLQSFINNYPDSKYLDN 149 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A V ++ K EI + Y +Y ++I + L++Y E+AM ++A Sbjct: 150 ANVMVDELTTKIEKKAYEIAKQYNTISDYKSSIKAVENFLSDYPGTSFREDAMFLKLDAM 209 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 LA + SL++ RY + A +TLVK Sbjct: 210 YNLA----TKSFASLMEGRYNEA--ASAYKTLVK 237 >gi|320105768|ref|YP_004181358.1| outer membrane assembly lipoprotein YfiO [Terriglobus saanensis SP1PR4] gi|319924289|gb|ADV81364.1| outer membrane assembly lipoprotein YfiO [Terriglobus saanensis SP1PR4] Length = 596 Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 12/152 (7%) Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ--RATKLMLQYMSRIVERYTNSPYV 175 +++IT +P + VG Y + + D P +A +Y + +++++ +S + Sbjct: 187 KDFITFFPNAPEAAEAQMRVGDIYFKQM-DTPDRDYTKAVHAQEEYRT-MLQQFPDSTLI 244 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 GA+ + + LA +E I +Y R + A+I R+Q V+ Y H++EA+ L + Sbjct: 245 PGAKQRLREVQEVLATRETNIAAFYAGRENWPASIARYQTVVDTYPIFSHSDEALIGLGD 304 Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYVE 267 A+ A EAR V + + P+G AR V+ Sbjct: 305 AFAA-----EARMVRVM---KLPEGAKARLVK 328 >gi|145641511|ref|ZP_01797089.1| conserved hypothetical lipoprotein [Haemophilus influenzae R3021] gi|145273802|gb|EDK13670.1| conserved hypothetical lipoprotein [Haemophilus influenzae 22.4-21] Length = 124 Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 44/91 (48%) Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 +V + NSPY + A + ++ LA E+EI ++Y KR +VA R +L Y D Sbjct: 10 NLVRVFPNSPYAQDALARMAYIKDALARHELEIAKFYAKRKAWVAVANRVVGMLKQYPDT 69 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 + E + + EAY + L A + +I Sbjct: 70 KATYEGLFLMQEAYEKMGLTALANDTQKIID 100 >gi|319955738|ref|YP_004167005.1| outer membrane assembly lipoprotein yfio [Cellulophaga algicola DSM 14237] gi|319424398|gb|ADV51507.1| outer membrane assembly lipoprotein YfiO [Cellulophaga algicola DSM 14237] Length = 274 Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust. Identities = 37/182 (20%), Positives = 74/182 (40%), Gaps = 16/182 (8%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y Y A E ++ YP+S +LV SY + D DQ T LQ + Sbjct: 81 YQIKDYNTAGYQFERFLKSYPKSDKAQESGFLVAKSYYMLSPDYSLDQTDTDKALQKLQT 140 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY------VAAIPRFQLVLA 218 + + S ++ A + K +EIG+ + K GEY ++A + Sbjct: 141 FINTFPESEFMPEANQMAKDLTQKKELKAIEIGKQFTKLGEYYTLDFSISAAAAMDNFIL 200 Query: 219 NYSDAEHAEEAMARLVEAYVALAL----------MDEAREVVSLIQERYPQGYWARYVET 268 ++ + + E+A+ ++A LAL + EA+ + +++ +P+ + + Sbjct: 201 DFPGSIYKEDALFYKMKALSNLALNSTEQKKKERLQEAKTAYNTLKKNFPETQFEKDANN 260 Query: 269 LV 270 ++ Sbjct: 261 MM 262 >gi|332882672|ref|ZP_08450284.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679472|gb|EGJ52457.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 287 Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust. Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 47/215 (21%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR----------------- 146 QY A KY++A L E+ ++Y + +Y+L G +Y QM + Sbjct: 60 QYKAKKYRKAVKLFEQIASEYSGKPQGERLYFLQGDAYYQMKQYSLATYPFERLQKIYPR 119 Query: 147 -----------------DVPY---DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 VP DQ T L+ + ++RY++S Y K A + Sbjct: 120 SAKAVEAAFLEAKSLYMQVPTYSVDQTYTYQALEKLQYFMDRYSDSDYAKEANELILNLL 179 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM-ARLVEAY-------- 237 QL KE EI + Y +Y AA+ LAN + E+A+ RL AY Sbjct: 180 TQLQKKEFEIAKQYDLIRDYQAAMKSLDNFLANNPGSVFREDALYTRLHSAYEWAINSVE 239 Query: 238 -VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 +D A+E + +P+ + + + ++K Sbjct: 240 SKQKERLDTAKEAYDTLLRAFPETKYKKEADNMLK 274 >gi|220907898|ref|YP_002483209.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 7425] gi|219864509|gb|ACL44848.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425] Length = 689 Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 8/127 (6%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 + LL A+ Y AG+ +A+ L + + Q+P + V ++ + + Y ++A Sbjct: 5 QKLLTQAYRHYQAGELAEASQLYQRVLQQHPGQLDALQVLGMIAAQQGDVETAISYFRQA 64 Query: 155 TKLM-----LQY-MSRIVERYTNSPYVKGA-RFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 ++ L Y + +E + + P A + + + RN LAA +G +L+RGEY Sbjct: 65 VQVAPAQADLHYNLGYALEAWGDGPAAIAAYQQALKLNRNHLAAC-YNLGELHLQRGEYA 123 Query: 208 AAIPRFQ 214 AIP FQ Sbjct: 124 GAIPCFQ 130 >gi|291280327|ref|YP_003497162.1| hypothetical protein DEFDS_1955 [Deferribacter desulfuricans SSM1] gi|290755029|dbj|BAI81406.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 252 Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 1/166 (0%) Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 +A K+ L A Y KY A + + Y+ Y + +G+SY M++ + D Sbjct: 66 LAAKAQLFLADSYYLDEKYDDAIAAYKSYLELYENQPDAKRALLRLGLSYYAMLQPIDRD 125 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q T+ ++ +Y + +N LA K+ + ++Y++ GE AAI Sbjct: 126 QSYTREAYNTFLKLNAKYPEFSKKYNIPAKLRKLKNMLAEKDFYVAKFYVRIGEDKAAIV 185 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS-LIQER 256 R + +L Y D + EA + + + D+A V+S L++ER Sbjct: 186 RLEKILKEYKDTKVYPEAALLYAKVLINIKKPDKAVSVLSQLLKER 231 >gi|146301211|ref|YP_001195802.1| DNA uptake lipoprotein-like protein [Flavobacterium johnsoniae UW101] gi|146155629|gb|ABQ06483.1| DNA uptake lipoprotein-like protein [Flavobacterium johnsoniae UW101] Length = 264 Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 4/184 (2%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 ++KA F Q + + A K M + Y +Y A E +++ YP S+ V Sbjct: 45 YNKAIRLFEQLAPTYRGKPQAEKLFYMFSQSYYKTKQYYLAGYQFESFVSGYPRSEKVQE 104 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 +L SY+++ DQ T L + ++ Y NS Y+ A V + +L K Sbjct: 105 AAFLGAYSYSKLAPVYSLDQADTVKALDKLQAFIDNYPNSEYLAQANESVKILNGKLEKK 164 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E + Y +Y +A+ F +A++ E+A+ ++ LA+ V S Sbjct: 165 AYENAKGYNTISDYKSALVAFDNFIADFPGTPLKEDALFYKYDSAYQLAI----NSVPSK 220 Query: 253 IQER 256 ++ER Sbjct: 221 MEER 224 >gi|206889500|ref|YP_002249884.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741438|gb|ACI20495.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM 11347] Length = 287 Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust. Identities = 28/123 (22%), Positives = 61/123 (49%), Gaps = 8/123 (6%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S ++ +E+Y+ A + +KE+ ++ A + F + ++++P + S YS K Sbjct: 137 SPGQLKNPKEIYDSAHVDIKEKRYASARDKFQEITKNYPDFELLPNSYFWIGETYYSEKK 196 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ A EE++ +YP+ GM++ ++ D++ K++ + R++ERY Sbjct: 197 YEDAILAYEEFLKKYPKHDKAPGALLKEGMAFLEL-----KDKKTAKVVFE---RVIERY 248 Query: 170 TNS 172 S Sbjct: 249 PKS 251 >gi|253582116|ref|ZP_04859340.1| tetratricopeptide repeat family protein [Fusobacterium varium ATCC 27725] gi|251836465|gb|EES65002.1| tetratricopeptide repeat family protein [Fusobacterium varium ATCC 27725] Length = 950 Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 23/192 (11%) Query: 36 VGWERQSSRDVY---LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPF 89 E + D Y LD D Y+R +Y+ + +L ++N+SKA E F Q ++ + Sbjct: 108 TALEDTKNSDFYMEALDKNGDF-YERALYDSGMTYLAKENYSKAEEMFQRVIQMNKKY-- 164 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----- 144 +++L A Y+ Y++ EY ++KN +YYL G +Y ++ Sbjct: 165 ---YSEAILSMAMSSYNKADYKKTLLFLNEYSNGKDKNKNQSLLYYLYGSTYYKLNSTED 221 Query: 145 ----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--EIGR 198 + V + + + + ++E Y+N V + Y+T+ N E IG Sbjct: 222 AIVYFQKVANKDKISSYGKKSILSLIEIYSNRGDVNSMQRYLTMLENTKEYGEAMRMIGD 281 Query: 199 YYLKRGEYVAAI 210 Y RGEY A+ Sbjct: 282 LYATRGEYEKAV 293 >gi|325288190|ref|YP_004263980.1| outer membrane assembly lipoprotein YfiO [Cellulophaga lytica DSM 7489] gi|324323644|gb|ADY31109.1| outer membrane assembly lipoprotein YfiO [Cellulophaga lytica DSM 7489] Length = 270 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 6/176 (3%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A F E +F +A Q + + + + A Y G+Y A E + Sbjct: 33 YEMAEKFYDEGDFKRANRLLEQIASKYIGKPQGERVMFFFANSYYQIGQYNDAGYQFERF 92 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + YP S+ + +L SY+ + R DQ T L + + Y +S Y+ A Sbjct: 93 VKAYPRSEKMQEASFLGAKSYSYLSRKYSLDQTDTDKALLKIQNFINTYPDSEYLPEANE 152 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEY------VAAIPRFQLVLANYSDAEHAEEAM 230 + K +EI + + K GE+ ++AI + + + + EEA+ Sbjct: 153 IAASLTRKKEKKALEIAKQFTKLGEFYDLEYSISAIKALENFMLDNPGTIYKEEAL 208 >gi|327402044|ref|YP_004342882.1| outer membrane assembly lipoprotein YfiO [Fluviicola taffensis DSM 16823] gi|327317552|gb|AEA42044.1| outer membrane assembly lipoprotein YfiO [Fluviicola taffensis DSM 16823] Length = 262 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 14/163 (8%) Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 ++P S V+ +L + + + DQ T + L + V R+ NS + F + Sbjct: 94 KFPYSPKVEETMFLAALCAVENSPEASLDQHETDVALNELQSFVSRFPNSERLDTCNFVM 153 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 R +L K+ + Y K Y AA+ Q L NY + + E+ A L+ LA+ Sbjct: 154 DKLRLKLEHKDFMNVKLYSKTENYRAAVVSSQQFLDNYPRSLNREDCWAILIRNSYHLAI 213 Query: 243 ----------MDEAREVVSLIQERYPQGYWAR----YVETLVK 271 +D+ E ++ +P + R YVE + K Sbjct: 214 NSIDAKLEERIDQTIERFNIFLVEFPNSNYLREFEGYVEKVKK 256 >gi|300775415|ref|ZP_07085277.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] gi|300506155|gb|EFK37291.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] Length = 331 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 6/137 (4%) Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + DFP G +A+ Y Y+ A + + +P+ + Y+ + Y + Sbjct: 63 TDDFPNVG------FNTAYANYYDKSYKLAGHQFKNFAVSFPKDPRAEEAAYMSALCYYE 116 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 D DQ +T+L + + + Y NS K + +L K E R Y K Sbjct: 117 GSMDYNLDQSSTELAINELQDFLNNYPNSERSKNISQLIDELSYKLEFKAYENARQYYKM 176 Query: 204 GEYVAAIPRFQLVLANY 220 GEY AA F VL ++ Sbjct: 177 GEYKAANVAFDNVLEDF 193 >gi|319790450|ref|YP_004152083.1| tol-pal system protein YbgF [Thermovibrio ammonificans HB-1] gi|317114952|gb|ADU97442.1| tol-pal system protein YbgF [Thermovibrio ammonificans HB-1] Length = 233 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 8/116 (6%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +++Y +A ++ NF KA + F Q + +P + +A +L + YS YQ AA+ Sbjct: 112 KDLYRQAFDAMEAGNFDKAQQLFEQLVQQYPDSDLADNALYWIGEIYYSHNDYQTAANYF 171 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 ++ I +YP V + + Y R + Q+A ++ + ++++Y +P Sbjct: 172 QQVIDKYPNGNKVPAAMLKLALCY----RGMGNTQKAKEI----LKEVIDKYPGTP 219 >gi|282878378|ref|ZP_06287170.1| outer membrane assembly lipoprotein YfiO [Prevotella buccalis ATCC 35310] gi|281299564|gb|EFA91941.1| outer membrane assembly lipoprotein YfiO [Prevotella buccalis ATCC 35310] Length = 282 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 7/183 (3%) Query: 26 IFF--SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 +FF +I V L G VY + T+ RY+ Y K F + +++A N Sbjct: 6 LFFISTICVALLFGSCASEFNAVYKSTDTNYRYE---YAKECFF--KGKYTRAITLLNDL 60 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 A++SL M A QY +G Y+ AA + Y+ YP+ K + Y VG S Sbjct: 61 IVVQKGTENAQESLYMLAMAQYKSGDYESAAQAFKRYVQSYPKGKYAELASYYVGESLFM 120 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 + DQ T + ++ + ++ A+ + +++L KE+ + Y Sbjct: 121 CTPEPRLDQSQTVSAIASFQEFLDLFPDAKLKNSAQNRLFELQDKLVKKELYSAQLYYDL 180 Query: 204 GEY 206 G Y Sbjct: 181 GPY 183 >gi|195953522|ref|YP_002121812.1| putative lipoprotein [Hydrogenobaculum sp. Y04AAS1] gi|195933134|gb|ACG57834.1| putative lipoprotein [Hydrogenobaculum sp. Y04AAS1] Length = 308 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 5/150 (3%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 E+N +A +Y + + ++ M A Y Y A E ++ YP S Sbjct: 56 EENLKRALKYLENLTPE-----QIERARFMLAKSYYLDHDYTNAIIYLESFLYYYPNSPE 110 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 Y++ SY ++ D DQ T + + +Y N+PY R + R ++ Sbjct: 111 APQATYMLIKSYYKIAPDAYRDQTYTYKAIDLAKEFLSKYPNNPYDSDVRALIDKARQKI 170 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 A + I ++Y G Y A R++ +L N Sbjct: 171 AKHDELIAKFYEDYGFYYPAAERYKDMLIN 200 >gi|86131754|ref|ZP_01050351.1| conserved hypothetical protein [Dokdonia donghaensis MED134] gi|85817576|gb|EAQ38750.1| conserved hypothetical protein [Dokdonia donghaensis MED134] Length = 270 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 37/173 (21%), Positives = 74/173 (42%), Gaps = 14/173 (8%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G Y Q E ++ +P+S+ + Y SY DQ T + + + Sbjct: 77 YELGDYYQGGYQFERFVKSFPQSEKREEAAYKSAESYYNRSPRFNLDQGDTYIAMGKLQD 136 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----RGEYVAAIPRFQLVLANY 220 + +Y +S + A V ++ K EI + Y K RG + AI F L ++ Sbjct: 137 FINQYPDSERLDDANAKVQELNQKIERKAYEIAKGYNKIGESRGTFPNAIKAFDNFLLDF 196 Query: 221 SDAEHAEEAMARLVEAYVALAL----------MDEAREVVSLIQERYPQGYWA 263 +++ E+A+ + LAL +++A+E + +++ +P+G ++ Sbjct: 197 PGSKYREDALYWKFNSTYQLALGSVRRRKAERLEDAKEAYNALEKYFPEGKYS 249 >gi|198282219|ref|YP_002218540.1| tol-pal system protein YbgF [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666817|ref|YP_002424584.1| hypothetical protein AFE_0070 [Acidithiobacillus ferrooxidans ATCC 23270] gi|198246740|gb|ACH82333.1| tol-pal system protein YbgF [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519030|gb|ACK79616.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 272 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 5/74 (6%) Query: 199 YYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 Y+L + +YV AA+ +V A +S + A EAM R+ E Y A+ +AR V+S I Sbjct: 189 YWLGQAQYVLGQNDAALKSLHVVEAQFSQSSKAPEAMLRMAEIYQAIGQSGKARTVLSKI 248 Query: 254 QERYPQGYWARYVE 267 +YP A+ E Sbjct: 249 ISQYPSTPSAQKAE 262 >gi|298529295|ref|ZP_07016698.1| tol-pal system protein YbgF [Desulfonatronospira thiodismutans ASO3-1] gi|298510731|gb|EFI34634.1| tol-pal system protein YbgF [Desulfonatronospira thiodismutans ASO3-1] Length = 292 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 31/141 (21%), Positives = 68/141 (48%), Gaps = 8/141 (5%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S D L+ V D + R +Y++A+ ++ + +A + + + ++P + + Sbjct: 156 SDDPDLEPVGDPQTARALYQRALDSFYDREYERAQSLWEEFAENYPEHDLISNAYFWQGE 215 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +Y +AA +E I+ YP+S + GMS+ ++ R + A +L+L Sbjct: 216 SFYQMQEYAEAALAYQEVISNYPDSNKITASMLKQGMSFIELGR-----EEAGQLVL--- 267 Query: 163 SRIVERYTNSPYVKGARFYVT 183 + ++E Y +S + AR +++ Sbjct: 268 NELLEEYPDSAEARRARAFIS 288 >gi|255034845|ref|YP_003085466.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053] gi|254947601|gb|ACT92301.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053] Length = 1019 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 30/138 (21%), Positives = 62/138 (44%), Gaps = 22/138 (15%) Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I+QYP+SK++D Y+ + D+ + ++ ++ +R++ S + A Sbjct: 628 ISQYPQSKHLDNAYF--------QLADIDFQNQSYSAAVKGFTRMINEKPKSTLIPAAL- 678 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + + Y Y AI F+ +L YSD+ AE A+ + E+Y A+ Sbjct: 679 -------------LRRAQSYYNLQVYEQAIVDFRKILTEYSDSPSAESALEGIQESYSAV 725 Query: 241 ALMDEAREVVSLIQERYP 258 +E +V+ ++++ P Sbjct: 726 GRPEEFNQVLGVVRKNNP 743 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 27/152 (17%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y A KY+ A + +E++ YP SK+ Y + SY + R LQY S+ Sbjct: 760 YYAEKYENAITSLQEFLKSYPASKHQYDATYFIASSYDKTNR--------VNEALQYYSK 811 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V++ ++F VG + E+EIG RG + A+ F+++ N + + Sbjct: 812 VVQQ-------NRSQF---VGAAAQRSAELEIG-----RGNFNNAVTNFRVLSRNAENKK 856 Query: 225 HAEEAMARLVEAYVALALMDE----AREVVSL 252 A L++ Y L D A+E++++ Sbjct: 857 DQATAWTGLMDTYFTLKSYDSTLYYAKEIINM 888 >gi|330901399|gb|EGH32818.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. japonica str. M301072PT] Length = 167 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 36/67 (53%) Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E+ + YYL R YVAA R + V+ N+ + + +A +VE+Y L L D A + + Sbjct: 3 EIHVADYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEV 62 Query: 253 IQERYPQ 259 ++ YP Sbjct: 63 LKTNYPN 69 >gi|237738478|ref|ZP_04568959.1| tetratricopeptide repeat family protein [Fusobacterium mortiferum ATCC 9817] gi|229420358|gb|EEO35405.1| tetratricopeptide repeat family protein [Fusobacterium mortiferum ATCC 9817] Length = 942 Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 59/151 (39%), Gaps = 25/151 (16%) Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 KY+ A GEEYI+QYP +N V +SY +M + E Sbjct: 561 KYEDAIKYGEEYISQYPNGENRAEVLDKTALSYFRMDN---------------FEKSKEY 605 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 YT + Y T +I Y +G+Y A+ ++Q V Y D+++ E Sbjct: 606 YTQLQSIPNYNEYAT----------FQIADSYYAQGKYDEALGKYQEVYTKYPDSKYGES 655 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259 A + + + L DE + ++YP Sbjct: 656 ANYWYLNSLINLKKYDEFEKAKEEFIKKYPN 686 >gi|15606494|ref|NP_213874.1| hypothetical protein aq_1273 [Aquifex aeolicus VF5] gi|18202108|sp|O67310|Y1273_AQUAE RecName: Full=UPF0169 lipoprotein aq_1273; Flags: Precursor gi|2983713|gb|AAC07276.1| putative protein [Aquifex aeolicus VF5] Length = 306 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 14/175 (8%) Query: 56 YQREVYEKAVLFLKE-------QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 Y +E YEK + ++ NF KA Y + P K LL+ + Y Sbjct: 32 YAKEFYEKGLSEYRKGDYGDAKSNFEKALNYLEHLT---PEQIKKVKYLLVKS--AYKDK 86 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 Y A E+++ YP SK + V+Y++ S ++ D DQ T ++ + + Sbjct: 87 DYVDAVVYAEDFLANYPGSKEAEEVFYILVDSLVKVAPDPYRDQTYTVEAIRKAKEFLAK 146 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG-EYVAAIPRFQLVLANYSD 222 Y +S + + + +LA E I ++Y + G Y AAI R++ VL N+ + Sbjct: 147 YPDSRFTRKVEEVIEEANKKLAYHEYYIAKFYEEYGYPYNAAI-RYREVLINFPE 200 >gi|260173188|ref|ZP_05759600.1| TPR domain-containing protein [Bacteroides sp. D2] gi|315921462|ref|ZP_07917702.1| TPR domain-containing protein [Bacteroides sp. D2] gi|313695337|gb|EFS32172.1| TPR domain-containing protein [Bacteroides sp. D2] Length = 1005 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 23/107 (21%) Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198 ++R+V +Y +SPY A R YV + N A KE+ EIG Sbjct: 606 LNRLVGKYPSSPYAVNAIYEKGRSYVLMDNNNQAITSFKELLSKYPESPVSRKAAAEIGL 665 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 Y ++G+Y AI ++ V+ Y +E A AM L YV L +DE Sbjct: 666 LYYQKGDYNQAIGAYKEVIEKYPGSEEARLAMRDLKSIYVDLNRIDE 712 >gi|973202|gb|AAC13872.1| unknown [Dichelobacter nodosus] Length = 106 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 3/69 (4%) Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LM 243 N L ++EI +YL++G++VAA R + +L +Y A A+A ++ AY L L Sbjct: 1 NLLGKHDLEIADFYLRKGDFVAAAARAKNILEHYETTPSAPYALAIMIRAYRELGQKLLA 60 Query: 244 DEAREVVSL 252 D+A V ++ Sbjct: 61 DDAMRVFNM 69 >gi|108760033|ref|YP_631571.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622] gi|108463913|gb|ABF89098.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622] Length = 1219 Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 V++ KE+N KA E F + DFP + A ++L + + AG+ + + GE ++ +Y Sbjct: 745 VVYKKEKNPKKAAEEFLRFVSDFPKSENADRALTYAMVIAQEAGEIDKGLAAGERFLKEY 804 Query: 125 PESK-NVDYVYYLVGM 139 P S + Y L G+ Sbjct: 805 PRSPFELKARYSLAGL 820 >gi|83815586|ref|YP_446179.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855] gi|294508105|ref|YP_003572163.1| Conserved hypothetical protein containing tetratricopeptide repeat domain [Salinibacter ruber M8] gi|83756980|gb|ABC45093.1| tetratricopeptide repeat domain protein [Salinibacter ruber DSM 13855] gi|294344433|emb|CBH25211.1| Conserved hypothetical protein containing tetratricopeptide repeat domain [Salinibacter ruber M8] Length = 284 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 14/204 (6%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 E Y+K V ++E + +A +F + R +A AR L M+ Q K+ AA+ Sbjct: 34 EAYKKGVAEMEEGDHQQAIRFFRAVFEYGRGNEWAPDARFKLAMA---QRGLNKHLVAAN 90 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSP 173 + + Y + + + SY +R Y DQ ++ + ++R+ N Sbjct: 91 EFQRFTQLYRNDELLPRAEFERANSY--YLRSPSYRLDQSDSEQAISLFRLFIDRHPNHE 148 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 V A + R +LA K+ E GR Y +R + AA ++ Y D A++A+ Sbjct: 149 LVPEAEEKINELRAKLARKKYEAGRLYEQRDMWQAATTVYERAFDQYPDTPWADDALLGA 208 Query: 234 VEAYVALALMDEAREVVSLIQERY 257 V Y+ A R V S ERY Sbjct: 209 VRTYIRYA----DRSVESKQAERY 228 >gi|160884096|ref|ZP_02065099.1| hypothetical protein BACOVA_02072 [Bacteroides ovatus ATCC 8483] gi|156110438|gb|EDO12183.1| hypothetical protein BACOVA_02072 [Bacteroides ovatus ATCC 8483] Length = 1005 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 23/107 (21%) Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198 ++R+V +Y SPY A R YV + N A KE+ EIG Sbjct: 606 LNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGL 665 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 Y ++G+Y AI ++ V+ Y +E A AM L YV L +DE Sbjct: 666 LYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLKSIYVDLNRIDE 712 >gi|289548801|ref|YP_003473789.1| outer membrane assembly lipoprotein YfiO [Thermocrinis albus DSM 14484] gi|289182418|gb|ADC89662.1| outer membrane assembly lipoprotein YfiO [Thermocrinis albus DSM 14484] Length = 301 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%) Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E+++ YP + +Y + SY ++ D DQ T L + +Y +SPY Sbjct: 94 EDFVASYPGLPETERAFYQLVDSYMKVAPDAYRDQSYTLKALDKAREFLSKYPSSPYADK 153 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY----SDAE 224 + +LA + I R+Y G Y +A R++ +L NY SDAE Sbjct: 154 VGDLIQQAVEKLAKHQYLIARFYEDYGYYYSAALRYRDLLINYPEQISDAE 204 >gi|325300114|ref|YP_004260031.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides salanitronis DSM 18170] gi|324319667|gb|ADY37558.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides salanitronis DSM 18170] Length = 1003 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 54/208 (25%), Positives = 83/208 (39%), Gaps = 33/208 (15%) Query: 51 VTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS--- 106 V D R +VY + + F++A + Q S P G SL AFV+ Sbjct: 540 VKDRRIVADVYNRMGDCHFHARRFAEASALYAQASAADPSLG--DYSLFQEAFVKGLQRD 597 Query: 107 -AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 AGK Q L +T YP S +D Y G ++ Q + +R T L+ Sbjct: 598 YAGKIQTLNRL----LTDYPASPYIDDALYEQGRAFVQQENNAGAIERYTVLL------- 646 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 +R+ SP + A EIG Y + +Y AI ++ V+++Y +E Sbjct: 647 -QRFPESPLSRKA--------------SNEIGLLYYQEDKYSEAIAAYKKVISDYPGSEE 691 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLI 253 A A L Y+ L +D+ VS + Sbjct: 692 ARLAQRDLKSIYIDLNRVDDYLSFVSTL 719 >gi|299144753|ref|ZP_07037821.1| TPR-domain containing protein [Bacteroides sp. 3_1_23] gi|298515244|gb|EFI39125.1| TPR-domain containing protein [Bacteroides sp. 3_1_23] Length = 1005 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 23/107 (21%) Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198 ++R+V +Y SPY A R YV + N A KE+ EIG Sbjct: 606 LNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGL 665 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 Y ++G+Y AI ++ V+ Y +E A AM L YV L +DE Sbjct: 666 LYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLKSIYVDLNRIDE 712 >gi|237717254|ref|ZP_04547735.1| TPR domain-containing protein [Bacteroides sp. D1] gi|262406021|ref|ZP_06082571.1| TPR domain-containing protein [Bacteroides sp. 2_1_22] gi|294806889|ref|ZP_06765714.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC 1b] gi|229443237|gb|EEO49028.1| TPR domain-containing protein [Bacteroides sp. D1] gi|262356896|gb|EEZ05986.1| TPR domain-containing protein [Bacteroides sp. 2_1_22] gi|294445918|gb|EFG14560.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC 1b] Length = 1005 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 23/107 (21%) Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198 ++R+V +Y SPY A R YV + N A KE+ EIG Sbjct: 606 LNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGL 665 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 Y ++G+Y AI ++ V+ Y +E A AM L YV L +DE Sbjct: 666 LYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLKSIYVDLNRIDE 712 >gi|295085535|emb|CBK67058.1| Uncharacterized protein conserved in bacteria [Bacteroides xylanisolvens XB1A] Length = 1005 Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 23/107 (21%) Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198 ++R+V +Y SPY A R YV + N A KE+ EIG Sbjct: 606 LNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGL 665 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 Y ++G+Y AI ++ V+ Y +E A AM L YV L +DE Sbjct: 666 LYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLKSIYVDLNRIDE 712 >gi|293368722|ref|ZP_06615327.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f] gi|292636187|gb|EFF54674.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f] Length = 1005 Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 23/107 (21%) Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198 ++R+V +Y SPY A R YV + N A KE+ EIG Sbjct: 606 LNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGL 665 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 Y ++G+Y AI ++ V+ Y +E A AM L YV L +DE Sbjct: 666 LYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLKSIYVDLNRIDE 712 >gi|253699141|ref|YP_003020330.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. M21] gi|251773991|gb|ACT16572.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. M21] Length = 256 Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust. Identities = 30/148 (20%), Positives = 60/148 (40%) Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 +P Y Y + +S+ Q I DQ K + + + +Y S Y + Sbjct: 98 HPTHPQAPYALYRLALSHYQQIAGTDTDQTPVKNAVATLEAFLGQYPRSEYAPELSKKLA 157 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 R++ A E +G +YL+ +Y +AI R L + ++ + L +AY+ + Sbjct: 158 DCRDKQLAYENYVGNFYLRSEKYQSAIKRLNEALVRFPGLTRLDDTLFYLGKAYLKAGEL 217 Query: 244 DEAREVVSLIQERYPQGYWARYVETLVK 271 + + V+ + +P R L++ Sbjct: 218 QQGKVVLQRLAAEHPASPRNREAAALLQ 245 >gi|78358000|ref|YP_389449.1| TPR repeat-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220405|gb|ABB39754.1| TPR repeat [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 1154 Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 36/65 (55%) Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 G ++ +G+Y A +FQ V+ N+ D+ E+ L A L D+A ++V I++R Sbjct: 622 GDHFFNKGQYQKAADQFQFVVQNHPDSRFVRESSVGLARALYRLGYYDQAYQIVDYIEKR 681 Query: 257 YPQGY 261 +P+ Y Sbjct: 682 WPRFY 686 >gi|298480096|ref|ZP_06998295.1| TPR-domain containing protein [Bacteroides sp. D22] gi|298273905|gb|EFI15467.1| TPR-domain containing protein [Bacteroides sp. D22] Length = 1005 Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 23/107 (21%) Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198 ++R+V +Y SPY A R YV + N A KE+ EIG Sbjct: 606 LNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGL 665 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 Y ++G+Y AI ++ V+ Y +E A AM L YV L +DE Sbjct: 666 LYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLKSIYVDLNRIDE 712 >gi|237719009|ref|ZP_04549490.1| TPR-domain-containing protein [Bacteroides sp. 2_2_4] gi|229451787|gb|EEO57578.1| TPR-domain-containing protein [Bacteroides sp. 2_2_4] Length = 1005 Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 23/107 (21%) Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198 ++R+V +Y SPY A R YV + N A KE+ EIG Sbjct: 606 LNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGL 665 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 Y ++G+Y AI ++ V+ Y +E A AM L YV L +DE Sbjct: 666 LYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLKSIYVDLNRIDE 712 >gi|82523862|emb|CAI78810.1| hypothetical protein [uncultured candidate division WS3 bacterium] Length = 310 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 22/134 (16%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A++ +S GKYQ A +Y+ YP ++ D Y +G Y Y QR ++ Sbjct: 195 AYLDFSKGKYQLAIQGFTDYLKNYPGTERADNAQYWIGECY--------YVQRDHDSAIE 246 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 R++++Y + GA +IG L AI + + V+ Y Sbjct: 247 AFQRVLDQYPDGNKAPGAML--------------KIGYALLSLDREREAIRQLKTVMERY 292 Query: 221 SDAEHAEEAMARLV 234 AE A A+L+ Sbjct: 293 PQTSEAEHARAKLL 306 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YY++R ++ +AI FQ VL Y D A AM ++ A ++L EA + + ERYP Sbjct: 235 YYVQR-DHDSAIEAFQRVLDQYPDGNKAPGAMLKIGYALLSLDREREAIRQLKTVMERYP 293 Query: 259 QGYWARYV 266 Q A + Sbjct: 294 QTSEAEHA 301 >gi|86144192|ref|ZP_01062528.1| lipoprotein protein, putative [Leeuwenhoekiella blandensis MED217] gi|85829322|gb|EAQ47788.1| lipoprotein protein, putative [Leeuwenhoekiella blandensis MED217] Length = 268 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 27/112 (24%), Positives = 50/112 (44%) Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + +++ YP+S + Y +SYA++ + DQ T+ L Y+ + + Y S Y Sbjct: 95 DRFVSAYPDSDKAEEAQYKAAVSYAELSPNYQLDQSETEKGLDYLQQFITAYPESEYAAD 154 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 A + +L K + + + K +Y AI F L++Y + E A Sbjct: 155 ASERIKELSIKLQKKSYMVAKGWHKIMDYPVAISAFDDFLSDYPGSPFREAA 206 >gi|313205262|ref|YP_004043919.1| hypothetical protein [Paludibacter propionicigenes WB4] gi|312444578|gb|ADQ80934.1| Tetratricopeptide TPR_1 repeat-containing protein [Paludibacter propionicigenes WB4] Length = 1010 Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust. Identities = 48/202 (23%), Positives = 80/202 (39%), Gaps = 32/202 (15%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 +N SKA ++++ P A ++ SA+V Y + E ITQYP+S+ Sbjct: 559 RNLSKAQLFYSKAVAASP--NTADYAMFQSAYVAGLQKNYSSKITKLESLITQYPKSEYT 616 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 D Y +G +Y LM+ + + Y R +++A Sbjct: 617 DDAMYEMGRAY---------------LMMDNNEKAIATYQ--------RLLAAQPTSEMA 653 Query: 191 AK-EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 K +EIG Y + AIP ++ V+A Y + A A+ L Y+ EA +V Sbjct: 654 RKAALEIGMVYYNEKQNDRAIPAYKNVIAKYPGTDEANTALESLQTLYI------EANDV 707 Query: 250 VSLIQERYPQGYWARYVETLVK 271 S + G+ + V V+ Sbjct: 708 SSYLNYTKSLGHVVKSVNAAVE 729 >gi|197116873|ref|YP_002137300.1| outer membrane protein assembly lipoprotein YfiO [Geobacter bemidjiensis Bem] gi|197086233|gb|ACH37504.1| outer membrane protein assembly lipoprotein YfiO, putative [Geobacter bemidjiensis Bem] Length = 256 Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust. Identities = 38/188 (20%), Positives = 80/188 (42%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 +N+++A E + + G+ ++ L A + Y +AA+ E++ +P Sbjct: 45 RNYAEAIESWKKVKESDTAPGLTSQAELKIADAHFENKAYIEAAAAYEDFRKLHPTHPQA 104 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 Y Y + +S+ Q I DQ K + + + +Y S Y + R++ Sbjct: 105 PYALYRLALSHYQQITGTDTDQTPVKNAVATLEAFLGQYPRSEYAPELSGKLADCRDKQL 164 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 A E +G +YL+ +Y +AI R L + ++ + L +AY+ + + + V+ Sbjct: 165 AYENYVGNFYLRTEKYQSAIKRLNEALVRFPGLTRLDDTLFYLGKAYLKAGDVKQGKVVL 224 Query: 251 SLIQERYP 258 + +P Sbjct: 225 QRLAAEHP 232 >gi|298372047|ref|ZP_06982037.1| TPR-domain containing protein [Bacteroidetes oral taxon 274 str. F0058] gi|298274951|gb|EFI16502.1| TPR-domain containing protein [Bacteroidetes oral taxon 274 str. F0058] Length = 999 Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 14/97 (14%) Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + R++++Y NS Y A++ EIGR Y+ + +Y AI + VL NY Sbjct: 591 LQRLIKKYPNSVYAPKAQY--------------EIGRAYVLQNKYSKAIEEYNTVLTNYP 636 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 A +A+ Y + D+A + E+YP Sbjct: 637 QTPIARKAILETGMLYENMGQTDKAIAAYKNVVEKYP 673 >gi|294645887|ref|ZP_06723563.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a] gi|292638767|gb|EFF57109.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a] Length = 601 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 23/107 (21%) Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198 ++R+V +Y SPY A R YV + N A KE+ EIG Sbjct: 202 LNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGL 261 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 Y ++G+Y AI ++ V+ Y +E A AM L YV L +DE Sbjct: 262 LYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLKSIYVDLNRIDE 308 >gi|294056473|ref|YP_003550131.1| Tetratricopeptide TPR_2 repeat protein [Coraliomargarita akajimensis DSM 45221] gi|293615806|gb|ADE55961.1| Tetratricopeptide TPR_2 repeat protein [Coraliomargarita akajimensis DSM 45221] Length = 342 Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust. Identities = 38/171 (22%), Positives = 73/171 (42%), Gaps = 3/171 (1%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + + ++ + F + P++ + +L+ A V + A + I YP+S Sbjct: 156 KQYGESIKQFEGVISNAPYSDYSPLALMDIALVAEKRNDDEVAIDALDRLINFYPQSMLA 215 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 YY + +Y ++++ YDQ +T+ + Y + + S V + N LA Sbjct: 216 PDAYYTLAKTYGGLVQNAEYDQGSTRQAISYYEDYLVLFPESQSVGEVEANLKKMENLLA 275 Query: 191 AKEVEIGR-YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL--VEAYV 238 + + +G YY R AA+ + + D+E A EA R+ +EA V Sbjct: 276 SSRLLLGDFYYFHRSNNTAALVFYNETITIAPDSEAAAEAQNRINDIEAGV 326 >gi|110636602|ref|YP_676809.1| TPR repeat-containing gliding mobility protein [Cytophaga hutchinsonii ATCC 33406] gi|110279283|gb|ABG57469.1| gliding motility-related protein; TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406] Length = 794 Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 21/115 (18%) Query: 149 PYDQRATKLMLQYMSRIVE-------RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 P D TK ++ + I++ R+ NS YV + Y+ VGR ++ Sbjct: 95 PLDTNKTKGLISQLDDIIKKASMPIRRHKNSDYVDDS--YILVGRCRI------------ 140 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 RGE+ I ++ V A+ D + E++ LV AY+A +D A+ V+ + ++ Sbjct: 141 YRGEFKMGIETYKYVNAHGKDDDDKIESLVYLVRAYMAANQLDNAKTVLDHLDKQ 195 >gi|187735051|ref|YP_001877163.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila ATCC BAA-835] gi|187425103|gb|ACD04382.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila ATCC BAA-835] Length = 1077 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 42/193 (21%), Positives = 76/193 (39%), Gaps = 35/193 (18%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 AY+ N+ +P A +L A + G+ + L +++ ++P SK Y Sbjct: 362 AYQLINES---YPDAPGREDNLYYLAMTTWQLGEADKGGELVAQHLKEFPNSK---YAPM 415 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP---------YVKGARFYVTVGR 186 L +S ++++ +D L +Q +++E + + P Y KGA + Sbjct: 416 LNTLSLEGLLKEKKFD-----LCVQQADKVMELHKDDPTHKFYELALYCKGASLF----- 465 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 L A + Y A+P + + Y D+ + + AM L E Y L DEA Sbjct: 466 -NLGAADA---------SRYKEAVPVLERFVKEYRDSTYLKTAMYLLGETYTNLGNTDEA 515 Query: 247 REVVSLIQERYPQ 259 + R+P Sbjct: 516 IRSFTNYIARFPD 528 >gi|283975459|gb|ADB55715.1| heat shock protein 90 [Pseudozyma flocculosa] Length = 617 Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust. Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 2/93 (2%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + NF+K YE F + + ++ L + F+++ + K + ++YIT+ P+ Sbjct: 318 KDNFAKFYEAFGKNLKLGIHEDATNRNKL-AEFLRFHSTKSGDEMTSLKDYITRMPQDGK 376 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + ++YL G S A IRD P+ +R K L+ + Sbjct: 377 NNSIFYLTGESLAS-IRDSPFLERLKKKGLEVL 408 >gi|254431650|ref|ZP_05045353.1| ribosomal protein S4 [Cyanobium sp. PCC 7001] gi|197626103|gb|EDY38662.1| ribosomal protein S4 [Cyanobium sp. PCC 7001] Length = 188 Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 59/140 (42%), Gaps = 23/140 (16%) Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 D P G+ RKS S Y G++ QA EY + E + + + Y G+S Q++ Sbjct: 3 DLP--GLTRKSAKRS----YPPGQHGQARRKRSEYAIRLEEKQKLRFNY---GISERQLV 53 Query: 146 RDVPYDQRAT-----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 R Y ++A KL+ + I R P V GAR V G + + V Sbjct: 54 R---YVKKARAQGGSSGTNLLKLLENRLDNICFRLGFGPTVPGARQLVNHGHVTVNGRVV 110 Query: 195 EIGRYYLKRGEYVAAIPRFQ 214 +I Y K G+ VA R Q Sbjct: 111 DIASYQCKPGDVVAIRERKQ 130 >gi|319411484|emb|CBQ73528.1| probable heat shock protein 80 [Sporisorium reilianum] Length = 705 Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust. Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 2/93 (2%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + NF+K YE F + + A ++ F+++ + K + + ++YIT+ P+ Sbjct: 405 KDNFAKFYEAFGKNLK-LGIHEDATNRAKLAEFLRFHSTKSGEEMTSLKDYITRMPQDGK 463 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + ++YL G S IRD P+ +R K L+ + Sbjct: 464 NNQIFYLTGESLGS-IRDSPFLERLKKKGLEVL 495 >gi|149176357|ref|ZP_01854971.1| hypothetical protein PM8797T_07539 [Planctomyces maris DSM 8797] gi|148844709|gb|EDL59058.1| hypothetical protein PM8797T_07539 [Planctomyces maris DSM 8797] Length = 1027 Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust. Identities = 48/219 (21%), Positives = 91/219 (41%), Gaps = 34/219 (15%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V+ D +D ++ A+ K+ + A E F + +D+P + Sbjct: 34 VHADKASDE------FQLAIGLYKQNRWELATERFQKYLKDYPTDASVPLAKFYLGLTLV 87 Query: 106 SAGKYQQAASLGEEYITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRA-TKLMLQYMS 163 + KYQ+A ++ E++ Q+P++ N+ D +Y + SY ++ D+ ++ T+ + Y + Sbjct: 88 NQQKYQEARTILREFVKQHPQNNNLPDALYRIAECSY--LLDDLDAAEKEFTEFLKLYPN 145 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 +E + PY G L+RG+ AI FQ L + Sbjct: 146 HALEEWA-YPY---------------------FGDVLLRRGKADLAIKSFQRSLERHPKG 183 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLI--QERYPQG 260 AE+A L +Y+ DEA + I Q+ + +G Sbjct: 184 AMAEDAQFGLASSYLRNKQSDEAEKRFKAIAGQKNHSRG 222 >gi|256370729|ref|YP_003108554.1| hypothetical protein SMDSEM_178 [Candidatus Sulcia muelleri SMDSEM] gi|256009521|gb|ACU52881.1| hypothetical protein SMDSEM_178 [Candidatus Sulcia muelleri SMDSEM] Length = 643 Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust. Identities = 21/84 (25%), Positives = 42/84 (50%) Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 +GM Y + D +DQ+ ++ + ++ Y NS + A+ + L K++ I Sbjct: 468 LGMCYYKQANDYNFDQQNNLKSIKVFLKFIKSYPNSLKLNTAKKMLYKAVLNLKKKQISI 527 Query: 197 GRYYLKRGEYVAAIPRFQLVLANY 220 G +Y KR +Y A++ F+ + N+ Sbjct: 528 GNFYFKRKKYKASLFIFKDNIENF 551 >gi|150007834|ref|YP_001302577.1| hypothetical protein BDI_1192 [Parabacteroides distasonis ATCC 8503] gi|255013465|ref|ZP_05285591.1| hypothetical protein B2_06125 [Bacteroides sp. 2_1_7] gi|256840092|ref|ZP_05545601.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|262381665|ref|ZP_06074803.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|298376805|ref|ZP_06986760.1| lipoprotein [Bacteroides sp. 3_1_19] gi|301310138|ref|ZP_07216077.1| putative lipoprotein [Bacteroides sp. 20_3] gi|149936258|gb|ABR42955.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] gi|256739022|gb|EEU52347.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|262296842|gb|EEY84772.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|298266683|gb|EFI08341.1| lipoprotein [Bacteroides sp. 3_1_19] gi|300831712|gb|EFK62343.1| putative lipoprotein [Bacteroides sp. 20_3] Length = 269 Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust. Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 17/222 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A + + +SK+ ++ F A +SL + A Y YQ A+ E Y Sbjct: 34 YSYAKKYFNAKQYSKSATLLDELVTIFKGTAYAEESLYLLAQSYYGQKDYQTASQYFETY 93 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 T YP+ + + + G D DQ T ++ + +E Y S + A+ Sbjct: 94 YTTYPKGEFTELSRFYSGYGLYLDSPDPRLDQSQTYKAIEQLQLYLEYYPQSERAEEAQN 153 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVE 235 + + +LA KE+ R Y G Y+ + + Q L NY +++ EE M ++ Sbjct: 154 IMFELQEKLAYKELMATRLYFNLGTYMGNNFQSCVITAQNALKNYPYSKYREEFMFLIIR 213 Query: 236 AYVALALM-----------DEAREVVSLIQERYPQGYWARYV 266 A LAL+ D E + + E YP+G + + V Sbjct: 214 AKYELALVSVEEKLQGRYRDVVDEYYNYMNE-YPEGNYVKQV 254 >gi|297569747|ref|YP_003691091.1| hypothetical protein DaAHT2_1781 [Desulfurivibrio alkaliphilus AHT2] gi|296925662|gb|ADH86472.1| hypothetical protein DaAHT2_1781 [Desulfurivibrio alkaliphilus AHT2] Length = 239 Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 8/102 (7%) Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 VD Y++G+ YA D + R +L QY ++++ + NSP V A V + + + Sbjct: 58 VDLALYVLGLVYA----DPAFKDRNAQLSRQYFAQLIRHFPNSPLVPEANILVDL-YDAM 112 Query: 190 AAKEVEIGRYY--LKRG-EYVAAIPRFQLVLANYSDAEHAEE 228 AA+++ I LK E AA+PR + N+ +A E Sbjct: 113 AARDLAIATLSERLKTASEATAALPRPLVEDQNFEEAARKNE 154 >gi|157273540|gb|ABV27439.1| probable soluble lytic transglycosylase [Candidatus Chloracidobacterium thermophilum] Length = 801 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 17/62 (27%), Positives = 35/62 (56%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 F E+N+ +A +F++ R++P + K + +AG+Y++A + E +I YP+ Sbjct: 300 FFIEENWDEAVRWFDRAHREYPTSPEGEKGYYQAGHALQNAGRYREAVARYEAFIAAYPD 359 Query: 127 SK 128 S+ Sbjct: 360 SE 361 >gi|281358385|ref|ZP_06244867.1| DNA uptake lipoprotein-like protein [Victivallis vadensis ATCC BAA-548] gi|281315212|gb|EFA99243.1| DNA uptake lipoprotein-like protein [Victivallis vadensis ATCC BAA-548] Length = 359 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 35/162 (21%), Positives = 67/162 (41%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 K+ E F + PFA A ++ L A++ GK +++ I +P++K Y Sbjct: 135 DKSIEVFEKALDRAPFAESAPEARLRLAYLFDQKGKVKESLEQLRIIIRDFPDAKACRYA 194 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Y + ++ R D + + +E+Y ++P + + R+ A + Sbjct: 195 YLALANGLYELSRRGDGDGAYNRESYELFKTFLEKYPDAPEAPWVKVRMVRSRDIQAGRL 254 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 E+ YY + G A+ VL +Y D A+ + LV+ Sbjct: 255 YELAEYYERAGRKEASERYLAQVLKDYPDTTSADASERLLVK 296 >gi|225013058|ref|ZP_03703473.1| DNA uptake lipoprotein-like protein [Flavobacteria bacterium MS024-2A] gi|225002786|gb|EEG40767.1| DNA uptake lipoprotein-like protein [Flavobacteria bacterium MS024-2A] Length = 275 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 39/184 (21%), Positives = 77/184 (41%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E Y++A ++ + KA F Q + A++ + A + Y AA E Sbjct: 35 EKYKQAEVYYNSGEYRKANRLFEQIIPKYRGKAQAQRIIFFFADSYFQTKSYYLAAYQYE 94 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +I YP+S + + SY DQ T ++ + + Y NS ++ A Sbjct: 95 NFIKSYPQSDRIQEATFKAAKSYYFSSPKFSLDQEDTYTAIEKLQVFINLYPNSEFIVEA 154 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 ++ + +L K+ EI + Y +Y +AI + +A++ ++ E A+ +A Sbjct: 155 NQMISELQEKLEQKDFEIAKQYYTIRDYQSAIKSSENFIASFPGTKYRESALFNKFKASY 214 Query: 239 ALAL 242 +A+ Sbjct: 215 EIAV 218 >gi|149917378|ref|ZP_01905876.1| putative competence lipoprotein ComL [Plesiocystis pacifica SIR-1] gi|149821715|gb|EDM81111.1| putative competence lipoprotein ComL [Plesiocystis pacifica SIR-1] Length = 394 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 72/174 (41%), Gaps = 10/174 (5%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 RE YE A Q++ A Y FP++ R++ L+ A V Y +Y A Sbjct: 29 RENYELAQASFDNQDWEDAAAYARFVRERFPYSRYVREAKLLEARVLYELKEYPSAQDAF 88 Query: 118 EEYITQYPESKNV--DYVYYLVGMS-YAQMIRDVPY-------DQRATKLMLQYMSRIVE 167 ++ ++P ++V +V Y+V +S Y VP+ DQ + L + + Sbjct: 89 RMFMAEHPTHEHVVNGWVPYMVAVSAYMASPSSVPFLPPHFQRDQELLRQTLMELEVFFD 148 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 RY+ + AR +L E+ + R++L R AAI R Y+ Sbjct: 149 RYSGTRMEPLARKLEAEVNRRLLEHELYVARFHLDRDRPEAAIMRLSSAHDRYA 202 >gi|153805821|ref|ZP_01958489.1| hypothetical protein BACCAC_00058 [Bacteroides caccae ATCC 43185] gi|149130498|gb|EDM21704.1| hypothetical protein BACCAC_00058 [Bacteroides caccae ATCC 43185] Length = 1005 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 23/107 (21%) Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198 ++R+V +Y SPY A R YV + N A KE+ EIG Sbjct: 606 LNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLNKYPESPVSRKAAAEIGL 665 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 + ++G+Y AI ++ V+ Y +E A AM L YV L +DE Sbjct: 666 LFYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLKSIYVDLNRIDE 712 >gi|333029576|ref|ZP_08457637.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides coprosuis DSM 18011] gi|332740173|gb|EGJ70655.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides coprosuis DSM 18011] Length = 1006 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 22/156 (14%) Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 A V S+ A V Y + +L +YPES V +Y G S+ Q Sbjct: 579 ASVGDYSIYQMALVAGLQKNYSEKINLLSRLANEYPESPYVAQGWYEKGRSFVQ------ 632 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 Q+ ++ +++++Y +P + A E+G Y + G Y A Sbjct: 633 --QQNNSEAIRSFQQLIQKYPENPISRKA--------------AAEVGLLYYQDGNYNEA 676 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 I ++ V+ Y ++ A AM L YV L +DE Sbjct: 677 IKTYKWVVQKYPGSDEARMAMRDLKSLYVDLNRVDE 712 Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 34/67 (50%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YEK F+++QN S+A F Q + +P ++RK+ + Y G Y +A + Sbjct: 624 YEKGRSFVQQQNNSEAIRSFQQLIQKYPENPISRKAAAEVGLLYYQDGNYNEAIKTYKWV 683 Query: 121 ITQYPES 127 + +YP S Sbjct: 684 VQKYPGS 690 >gi|317970558|ref|ZP_07971948.1| 30S ribosomal protein S4 [Synechococcus sp. CB0205] Length = 202 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 17/137 (12%) Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 D P G+ RKS S Y G++ QA EY + E + + + Y G+S Q++ Sbjct: 17 DLP--GLTRKSAKRS----YPPGQHGQARRKRSEYAIRLEEKQKLRFNY---GISERQLV 67 Query: 146 R--------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 R + KL+ + + R P V GAR V G + + V+I Sbjct: 68 RYVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGHVTVNGRVVDIA 127 Query: 198 RYYLKRGEYVAAIPRFQ 214 Y K G+ VA R Q Sbjct: 128 SYQCKAGDVVAIRERKQ 144 >gi|32491283|ref|NP_871537.1| hypothetical protein WGLp534 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166490|dbj|BAC24680.1| yfiO [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 226 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 29/133 (21%), Positives = 67/133 (50%), Gaps = 14/133 (10%) Query: 112 QAASLGEEYITQYPESKN----VDYVYYLVGMSYAQMIRDVP----YDQR---ATK---L 157 + S+ EE I Q+ ES +D++ Y+ G+ + ++ Y ++ TK L Sbjct: 89 ENNSILEEIIDQFIESNPRCPYIDFLIYIQGLINMDLDKNTINFFIYKKKFIENTKYAYL 148 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 L +++ +Y NS + K ++ Y+ ++A E++I ++Y K+ Y A+ R ++ Sbjct: 149 ALNNFKKLIYKYPNSDFYKSSKNYIFHLNERIAFHELQIIKFYFKKHAYSASNFRILEMI 208 Query: 218 ANYSDAEHAEEAM 230 + + + ++E++ Sbjct: 209 NKFPNTKSSKESL 221 >gi|227536026|ref|ZP_03966075.1| conserved hypothetical lipoprotein [Sphingobacterium spiritivorum ATCC 33300] gi|227244139|gb|EEI94154.1| conserved hypothetical lipoprotein [Sphingobacterium spiritivorum ATCC 33300] Length = 304 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 37/171 (21%), Positives = 70/171 (40%), Gaps = 3/171 (1%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y++AV F +++ ++KA F+ + + A +A+ Y Y A +++ Sbjct: 40 YQEAVKFYEKKKYTKALALFDDLMQRYRGQAEAEDLYYYTAYTNYRLKDYTSARYHFKQF 99 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +P S + ++ + DQ T+ + + V Y S K A Sbjct: 100 AQTFPNSAKAEECRFMTAYCFYLDSPRSSLDQENTRKAIDELQLFVNLYPESEKAKEASD 159 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG---EYVAAIPRFQLVLANYSDAEHAEE 228 + R++L K + Y G +Y AA+ + VL +Y D ++AEE Sbjct: 160 LIQQLRDKLEKKAFSNAKLYYDMGLNDDYKAAVIALENVLKDYPDTKYAEE 210 >gi|319943000|ref|ZP_08017283.1| hypothetical protein HMPREF0551_0129 [Lautropia mirabilis ATCC 51599] gi|319743542|gb|EFV95946.1| hypothetical protein HMPREF0551_0129 [Lautropia mirabilis ATCC 51599] Length = 273 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 8/123 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ +E A+ ++ NF A + F + ++ +P + +L QY+ G Y A + Sbjct: 153 EKNEFEAALALFRKSNFKAADQAFAKFAKTYPESPYLPTALYWQGGAQYAQGNYNGAVNT 212 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + I ++P+S L+G + D K Q RI + + N+P Sbjct: 213 LQSLIQRFPDSARKADALLLIGNAQVDAGND--------KAARQTFIRIGKEHPNTPAAN 264 Query: 177 GAR 179 AR Sbjct: 265 AAR 267 >gi|15639360|ref|NP_218809.1| hypothetical protein TP0369 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025602|ref|YP_001933374.1| hypothetical protein TPASS_0369 [Treponema pallidum subsp. pallidum SS14] gi|14285869|sp|O83384|Y369_TREPA RecName: Full=Uncharacterized protein TP_0369; Flags: Precursor gi|3322653|gb|AAC65360.1| predicted coding region TP0369 [Treponema pallidum subsp. pallidum str. Nichols] gi|189018177|gb|ACD70795.1| hypothetical protein TPASS_0369 [Treponema pallidum subsp. pallidum SS14] Length = 516 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 6/65 (9%) Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 ASLG+ + Q+P + +D ++L G +Y ++ QR +L L+ I+ER+ +SP Sbjct: 443 ASLGD-FFAQFPSHERMDEAWFLRGQAY-----EINGAQRNVRLALEAYKTILERFPHSP 496 Query: 174 YVKGA 178 Y K A Sbjct: 497 YWKKA 501 >gi|298388044|ref|ZP_06997591.1| outer membrane protein [Bacteroides sp. 1_1_14] gi|298259224|gb|EFI02101.1| outer membrane protein [Bacteroides sp. 1_1_14] Length = 645 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 10/73 (13%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDV-RYQREVYEKAVL-------FLKEQNFSK 75 +T FF +A C LV + + D YLD DV Q +VY + F + +S Sbjct: 6 ITKFFLVAACGLVTF--AACSDEYLDKKVDVSETQEKVYSDSAKVAGVVNGFYGQIGYSH 63 Query: 76 AYEYFNQCSRDFP 88 +Y+ F QC DFP Sbjct: 64 SYKRFGQCGLDFP 76 >gi|237714494|ref|ZP_04544975.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262406359|ref|ZP_06082908.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294643239|ref|ZP_06721065.1| outer membrane assembly lipoprotein YfiO [Bacteroides ovatus SD CC 2a] gi|294806432|ref|ZP_06765273.1| outer membrane assembly lipoprotein YfiO [Bacteroides xylanisolvens SD CC 1b] gi|298482860|ref|ZP_07001043.1| hypothetical protein HMPREF0106_03328 [Bacteroides sp. D22] gi|229445263|gb|EEO51054.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262355062|gb|EEZ04153.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292641362|gb|EFF59554.1| outer membrane assembly lipoprotein YfiO [Bacteroides ovatus SD CC 2a] gi|294446295|gb|EFG14921.1| outer membrane assembly lipoprotein YfiO [Bacteroides xylanisolvens SD CC 1b] gi|295083909|emb|CBK65432.1| outer membrane assembly lipoprotein YfiO [Bacteroides xylanisolvens XB1A] gi|298271060|gb|EFI12638.1| hypothetical protein HMPREF0106_03328 [Bacteroides sp. D22] Length = 267 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 51/236 (21%), Positives = 93/236 (39%), Gaps = 24/236 (10%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 TD Y+ YE A + + ++++ N+ A +SL M Y+ YQ Sbjct: 28 TDYEYK---YEAAKNYFAKGQYNRSATLLNELITILKGTDKAEESLYMLGMSYYNQKDYQ 84 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---YDQRATKLMLQYMSRIVER 168 AA Y YP + + G + + D P DQ +T +Q + +E Sbjct: 85 TAAQTFITYFNTYPRGTFTELARFHAGKA---LFLDTPEPRLDQSSTYQAIQQLQMFMEY 141 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDA 223 + NS + A+ + +++L KE+ R Y G Y+ + + Q L +Y Sbjct: 142 FPNSTKKQEAQDMIFALQDKLVLKELYSARLYYNLGNYLGNNYESCVITAQNALKDYPYT 201 Query: 224 EHAEEAMARLVEAYVALAL-------MDEAREVVS---LIQERYPQGYWARYVETL 269 ++ EE ++ A +A+ MD RE V + +P+ + + E + Sbjct: 202 DYREELSILILRARHEMAIYSVEDKKMDRYRETVDEYYAFKNEFPESKYLKEAEKI 257 >gi|262199189|ref|YP_003270398.1| hypothetical protein Hoch_6030 [Haliangium ochraceum DSM 14365] gi|262082536|gb|ACY18505.1| hypothetical protein Hoch_6030 [Haliangium ochraceum DSM 14365] Length = 308 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 6/52 (11%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR---DVPYDQ 152 Q+ GKY+QAA L E+ +T+ P ++D +Y ++Y +M R D P +Q Sbjct: 24 QFEKGKYEQAAQLFEDALTKAP---HLDTAHYNAALTYKKMFRAGIDTPENQ 72 >gi|254416392|ref|ZP_05030145.1| ribosomal protein S4 [Microcoleus chthonoplastes PCC 7420] gi|196176830|gb|EDX71841.1| ribosomal protein S4 [Microcoleus chthonoplastes PCC 7420] Length = 202 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 17/130 (13%) Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 D P G+ RKS S Y G++ QA EY + E + + Y Y G++ Q++ Sbjct: 17 DLP--GLTRKSPRRS----YPPGQHGQARRKRSEYAIRLEEKQKLRYNY---GVTEKQLL 67 Query: 146 RDVPYDQRATKLMLQYMSRIVE-RYTNSPY-------VKGARFYVTVGRNQLAAKEVEIG 197 R V +RAT Q + ++E R N+ + + GAR V G + +EV I Sbjct: 68 RYVRKARRATGSTGQALLELLEMRLDNTVFRLGMAGTIPGARQLVNHGHVMVNGREVNIA 127 Query: 198 RYYLKRGEYV 207 Y + G+ + Sbjct: 128 SYQCRPGDVI 137 >gi|94264087|ref|ZP_01287886.1| Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1] gi|93455503|gb|EAT05693.1| Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1] Length = 703 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 14/129 (10%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV--QYSAGK----YQQ 112 E++E+A ++ A + Q R F + +A+++L +A + Q +A + +Q+ Sbjct: 56 ELWERAAAAIEADEPLTAARNYEQIHRQFGQSELAQEALWQAAELRRQLAAKEEDPDWQR 115 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 +L Y +YP+S + Y +G+++ QM R + L Y +RY +S Sbjct: 116 VRNLYRRYTVEYPDSHRREQAYLELGLAHFQM--------RFLREALTYFRLFEQRYPDS 167 Query: 173 PYVKGARFY 181 P + AR++ Sbjct: 168 PLLPRARYW 176 >gi|254495492|ref|ZP_05108416.1| conserved hypothetical protein [Polaribacter sp. MED152] gi|85819847|gb|EAQ41004.1| conserved hypothetical protein [Polaribacter sp. MED152] Length = 289 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 5/177 (2%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E Y+ AV + + FSKA F + + + + M A ++ Y A + Sbjct: 34 EKYKMAVKMYETKKFSKALRLFEKVTPAYRGKPQMERIQFMVAQSNFNVKNYTTAGYYFD 93 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + YP S + +L SY D T+ L+ + Y +S ++ A Sbjct: 94 RFTKNYPSSSKNEEAAFLSAYSYKLASPVSSKDPTDTRKALESFQMFINNYPDSDKIEEA 153 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEY-----VAAIPRFQLVLANYSDAEHAEEAM 230 + R +L K +I + Y +Y AAI F +LA+Y +E EEA+ Sbjct: 154 NQHYKELRYKLQKKYFDIAKVYYTTADYDMRNYKAAIQAFDNLLADYLGSEFKEEAL 210 >gi|313157575|gb|EFR56991.1| outer membrane assembly lipoprotein YfiO [Alistipes sp. HGB5] Length = 273 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 39/179 (21%), Positives = 79/179 (44%), Gaps = 4/179 (2%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117 +Y KA+ + +++ +S+A F ++G R+ + +A +Y Y AA+L Sbjct: 36 IYSKALEYYQKEKWSRASTLFEGVQH--YYSGTPREDSISFFNARCKYKNRDYDTAATLL 93 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 +++ ++ S ++ + + + + DQ T L ++ + RY +S ++ Sbjct: 94 DDFRRKFGRSAFIEDAEGMYALCFYYLSPGPSRDQTMTGQALIAINEFMSRYPHSEQIEN 153 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 + T +L K Y K G Y +AI + L Y ++ H EE M +V+A Sbjct: 154 FKTINTELTQRLHDKAYLNAYTYYKIGRYKSAIVSLKNALKQYPESSHREEIMYLIVDA 212 >gi|318040406|ref|ZP_07972362.1| 30S ribosomal protein S4 [Synechococcus sp. CB0101] Length = 202 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 23/140 (16%) Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 D P G+ RKS S Y G++ QA EY + E + + + Y G+S Q++ Sbjct: 17 DLP--GLTRKSAKRS----YPPGQHGQARRKRSEYAIRLEEKQKLRFNY---GISERQLV 67 Query: 146 RDVPYDQRAT-----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 R Y ++A KL+ + + R P V GAR V G + + V Sbjct: 68 R---YVKKARAQEGSTGTNLLKLLENRLDNVCFRLGFGPTVPGARQLVNHGHVTVNGRVV 124 Query: 195 EIGRYYLKRGEYVAAIPRFQ 214 +I Y K G+ VA R Q Sbjct: 125 DIPSYQCKAGDVVAIRERKQ 144 >gi|297530018|ref|YP_003671293.1| hypothetical protein GC56T3_1717 [Geobacillus sp. C56-T3] gi|297253270|gb|ADI26716.1| TPR repeat-containing protein [Geobacillus sp. C56-T3] Length = 1385 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 3/69 (4%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +AV++L+E KA + + P +AR++L++ G+YQ+AA+L E Y Sbjct: 1239 QAVVWLQEGQHEKAERQLEEIVAEDP---LAREALMLLGEQYMETGRYQEAAALWERYAD 1295 Query: 123 QYPESKNVD 131 YPE + ++ Sbjct: 1296 WYPEDEELN 1304 >gi|218961136|ref|YP_001740911.1| hypothetical protein CLOAM0824 [Candidatus Cloacamonas acidaminovorans] gi|167729793|emb|CAO80705.1| hypothetical protein CLOAM0824 [Candidatus Cloacamonas acidaminovorans] Length = 291 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 11/137 (8%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 +++ QN+ +AYE F G R+ LL+SA V G + ++ EY E Sbjct: 148 YVRIQNYDRAYEIILTAENKF---GKHRQLLLLSALVYGKKGIWLKSYHCFAEY-ESLGE 203 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 N D++ M+YA ++ + RA +L+ + ++ + Y N+ Y + R Y+ Sbjct: 204 ITNPDHL-----MAYANAAVNIGMNDRAIELLQR--AQEINPYINAVYEELIRLYLKKND 256 Query: 187 NQLAAKEVEIGRYYLKR 203 + A K ++I + Y+ R Sbjct: 257 YKNAKKVLDIAKRYISR 273 >gi|320160833|ref|YP_004174057.1| hypothetical protein ANT_14290 [Anaerolinea thermophila UNI-1] gi|319994686|dbj|BAJ63457.1| hypothetical protein ANT_14290 [Anaerolinea thermophila UNI-1] Length = 839 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 28/132 (21%), Positives = 62/132 (46%), Gaps = 21/132 (15%) Query: 47 YLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 Y++ D+ ++ +E +F + +KA E + +C FP A ++R++L ++ Y Sbjct: 424 YVNKAGDIEDAPQILFEAGRIFERGNYLTKAVETWQECHEKFPAAEISRRALFLAGITLY 483 Query: 106 SAGKYQQAASLGEEY--ITQYPESKNVDYVYYLVGMSY-------------AQMIRDVP- 149 + Q+ + + + ++ PE + Y++ VG +Y Q ++ P Sbjct: 484 RLNDFSQSRLIFQRFLILSDNPEDQAAAYLW--VGKTYQAENNLQQAKIAWEQAVQRDPT 541 Query: 150 --YDQRATKLML 159 Y QRA++L++ Sbjct: 542 GYYSQRASELLV 553 >gi|29345983|ref|NP_809486.1| hypothetical protein BT_0573 [Bacteroides thetaiotaomicron VPI-5482] gi|253568616|ref|ZP_04846027.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|298387378|ref|ZP_06996931.1| hypothetical protein HMPREF9007_04151 [Bacteroides sp. 1_1_14] gi|29337877|gb|AAO75680.1| lipoprotein protein, putative [Bacteroides thetaiotaomicron VPI-5482] gi|251842689|gb|EES70769.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|298260047|gb|EFI02918.1| hypothetical protein HMPREF9007_04151 [Bacteroides sp. 1_1_14] Length = 267 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 50/236 (21%), Positives = 93/236 (39%), Gaps = 24/236 (10%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 TD Y+ YE A + + ++++ N+ A +SL M Y+ YQ Sbjct: 28 TDYEYK---YEAAKNYFAKGQYNRSATLLNELITILKGTDKAEESLYMLGMSYYNQKDYQ 84 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---YDQRATKLMLQYMSRIVER 168 AA Y YP + + G S + D P DQ +T +Q + +E Sbjct: 85 TAAQTFITYFNTYPRGTFTELARFHAGKS---LFLDTPEPRLDQSSTYQAIQQLQMFMEY 141 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDA 223 + NS + A+ + +++L KE+ + Y G Y+ + + Q L +Y Sbjct: 142 FPNSTKKQEAQDMIFALQDKLVLKELYSAKLYYNLGNYLGNNYESCVITAQNALKDYPYT 201 Query: 224 EHAEEAMARLVEAYVALAL-------MDEAREVVS---LIQERYPQGYWARYVETL 269 ++ EE ++ A +A+ MD RE + + +P+ + + E + Sbjct: 202 DYREELSILILRARHEMAIYSVEDKKMDRYRETIDEYYAFKNEFPESKYLKEAEKI 257 >gi|313206826|ref|YP_004046003.1| outer membrane assembly lipoprotein yfio [Riemerella anatipestifer DSM 15868] gi|312446142|gb|ADQ82497.1| outer membrane assembly lipoprotein YfiO [Riemerella anatipestifer DSM 15868] gi|325335735|gb|ADZ12009.1| YfiO [Riemerella anatipestifer RA-GD] Length = 294 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 10/147 (6%) Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 Y+ + Y Q D DQ+ T+L + + + Y NS K + +L K Sbjct: 110 YMSAICYYQGSMDYNLDQKDTELAINELQSFLNNYPNSERAKNINELIDELSYKLEFKAY 169 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----------MD 244 E R Y K E +AI F+ VL ++ + + L++A LA+ ++ Sbjct: 170 ENARQYYKMLELKSAIISFENVLDDFPSTKLRPKIETMLMDAKAKLAIDSKFELKRERLE 229 Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271 A L+++ YP A+ TL K Sbjct: 230 HAVAYTHLMEKNYPDTDIAKTAVTLRK 256 >gi|94987535|ref|YP_595468.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Lawsonia intracellularis PHE/MN1-00] gi|94731784|emb|CAJ55147.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Lawsonia intracellularis PHE/MN1-00] Length = 1076 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 19/66 (28%), Positives = 34/66 (51%) Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 +G+ +GEY A+ FQL+L NY +++ ++A + EA A +V + Sbjct: 546 LGKDQFSKGEYADAVKTFQLILDNYPESKAVQDASRFMAEALFKQGHYSRALILVDFVDR 605 Query: 256 RYPQGY 261 R+P+ Y Sbjct: 606 RWPRLY 611 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 27/182 (14%) Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 P A + +L + G Q + EE + ++P+S + L+ + Q+I++ Sbjct: 646 PEAKDSHDTLFKIGTSYFKKGLMQGGKDVFEELLKKFPKSDSAPKA--LLALGEEQVIKE 703 Query: 148 VP--------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 P ++ ++ + Y +I++ Y NSP + A +LAA + Sbjct: 704 NPTIQELVTIFENPSSTIPEIYYKKILDEYPNSPEAQQAAI-------RLAA-------W 749 Query: 200 YLKRGEYVAAIPRFQLVLANYSD---AEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 L + A+ Q L Y + A AEE +AR + ALAL +E E + + E+ Sbjct: 750 KLWHRDIPTAMTMAQQFLDKYPESPYAPRAEEIIARGFDQSFALALQEENYERILSLWEK 809 Query: 257 YP 258 YP Sbjct: 810 YP 811 >gi|213961696|ref|ZP_03389962.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sputigena Capno] gi|213955485|gb|EEB66801.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sputigena Capno] Length = 268 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 61/157 (38%), Gaps = 10/157 (6%) Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 YP S+ +L S DQ T L+ + ++RY NS Y K A Sbjct: 98 YPRSEKATEASFLEAKSLYLETPKYSVDQTYTYQALEKLQYFLDRYPNSEYTKEANELTL 157 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM-ARLVEAY----- 237 +L K+ EI + Y K +Y AA+ L N + EEA+ RL AY Sbjct: 158 DLVTRLEKKDFEIAKQYDKIRDYQAAMKSLDNFLTNNPGSPFREEALYTRLHSAYEWAIN 217 Query: 238 ----VALALMDEAREVVSLIQERYPQGYWARYVETLV 270 ++ A+E + YP+ + + E ++ Sbjct: 218 SVESKKEERLNTAKEAYDNLLRAYPESKFKKEAENML 254 >gi|332711735|ref|ZP_08431666.1| hypothetical protein LYNGBM3L_67340 [Lyngbya majuscula 3L] gi|332349713|gb|EGJ29322.1| hypothetical protein LYNGBM3L_67340 [Lyngbya majuscula 3L] Length = 823 Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 21/157 (13%) Query: 105 YSAGKYQQAASLGEEYITQYPESKN-VDYVYYLVGMSYA-QMIRDVPYDQRATKLMLQYM 162 Y G+YQ+A L E+ I+ Y +S + + + LV ++ Q + D+ DQ Q + Sbjct: 21 YETGQYQEAIPLLEQLISNYTDSGDLIGEINSLVNLALVYQTLGDL--DQAK-----QTL 73 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANYS 221 S+ + + P K ++ QL A+ +E+ G+ YL G+ A+ +Q A Y Sbjct: 74 SQSFTKLSQLPNTKESQ--------QLRAQTLEVQGQIYLSLGQGSKALSTWQETSAIYQ 125 Query: 222 DA---EHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 D E+ V+A L L +A + ++ IQE Sbjct: 126 DIGDLTRLTESQIYQVQALRVLGLYHQATKTLTQIQE 162 >gi|188995218|ref|YP_001929470.1| hypothetical protein PGN_1354 [Porphyromonas gingivalis ATCC 33277] gi|188594898|dbj|BAG33873.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 310 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 5/124 (4%) Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 +EY +YP+ + Y G + + D DQ T L +Q + ++ + N Y K Sbjct: 132 QEYYNKYPKGLRAEEARYKAGYCFYEASPDSRLDQSDTYLAIQELQSYLDFFPNGKYAKE 191 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV-----LANYSDAEHAEEAMAR 232 A + +++LA KE + Y G Y+ R +V L Y +H EE + Sbjct: 192 AENMLFGLQDKLAYKEYRTAKLYYNLGLYLGNNYRSCIVTAEAALKTYPYTKHREELVFL 251 Query: 233 LVEA 236 +++A Sbjct: 252 MLQA 255 >gi|304312646|ref|YP_003812244.1| hypothetical protein HDN1F_30200 [gamma proteobacterium HdN1] gi|301798379|emb|CBL46603.1| Hypothetical protein HDN1F_30200 [gamma proteobacterium HdN1] Length = 1047 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 64/151 (42%), Gaps = 34/151 (22%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA-TKLMLQYMSR 164 S Y +A L E+ I PE ++ +YL+ + YD A + L + Sbjct: 149 SGANYARAIQLYEDQIRNAPEGTDLSDTWYLLAKA---------YDLNAEPEKALAALDT 199 Query: 165 IVERYTNSPYVKGARF-----YVTVGRNQ--LAA-----KEVEIGRYYL----------- 201 + ERY NSP + +F Y +G N LAA K G+YY Sbjct: 200 MAERYPNSPLMDEVQFRRGEQYFVMGNNDKALAAYKQVLKAGPEGKYYENALYKYGWSLY 259 Query: 202 KRGEYVAAIPRFQLVLANY-SDAEHAEEAMA 231 ++GEY AA+ F +L Y +AE E+ MA Sbjct: 260 RQGEYEAALTPFITLLDRYLPNAETVEQQMA 290 >gi|332884569|gb|EGK04827.1| hypothetical protein HMPREF9456_03297 [Dysgonomonas mossii DSM 22836] Length = 998 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 3/45 (6%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 L+ S F+Q G S G+++I+ YP SKN+ VY L+G SY Sbjct: 213 LIQSEFLQ---GNMNGTISEGQDFISSYPGSKNIAEVYRLLGSSY 254 >gi|71909660|ref|YP_287247.1| hypothetical protein Daro_4051 [Dechloromonas aromatica RCB] gi|71849281|gb|AAZ48777.1| conserved hypothetical protein [Dechloromonas aromatica RCB] Length = 243 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 22/134 (16%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 +A Q+ AGKY++AA ++ +YP+S Y +G ++ Y QR K + Sbjct: 129 AALNQFKAGKYKEAAVGFGAFVQKYPDSSLAPNAQYWLGNAW--------YAQRDCKRAI 180 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 + S + +Y S A ++ + ++ G A + V+A Sbjct: 181 EAQSLVTTKYAESAKAPDAWLAISTCQQEM--------------GNPTGAKRSLETVIAK 226 Query: 220 YSDAEHAEEAMARL 233 Y A A+ A RL Sbjct: 227 YPSAPAADTARERL 240 >gi|154492873|ref|ZP_02032499.1| hypothetical protein PARMER_02512 [Parabacteroides merdae ATCC 43184] gi|154087178|gb|EDN86223.1| hypothetical protein PARMER_02512 [Parabacteroides merdae ATCC 43184] Length = 269 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 55/222 (24%), Positives = 86/222 (38%), Gaps = 15/222 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A + + +SK+ ++ F A +SL + A Y YQ A+ Y Sbjct: 34 YSYAKKYFNAKQYSKSATLLDELVPIFKGTANAEESLYLLAQSYYGQKDYQTASQYFNTY 93 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 T YP+ + + Y G D DQ T + + +E Y S K A+ Sbjct: 94 YTTYPKGEFTELARYYSGYGLYLDSPDPRLDQAQTYEAINQLQLYLEYYPQSERAKEAQN 153 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG-----EYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + + +LA KE+ R Y G Y++ + Q L NY +++ EE M + Sbjct: 154 IMFELQEKLAYKELLAVRLYFNLGTYMGNNYLSCVITAQNALKNYPYSKYREEFMFYTIR 213 Query: 236 AYVALA-------LMDEAREVVS---LIQERYPQGYWARYVE 267 A LA L REVV YP+G + + V+ Sbjct: 214 AKYELAVVSVEEKLQGRYREVVDEYYNYMNEYPEGKYVKQVQ 255 >gi|94967104|ref|YP_589152.1| DNA uptake lipoprotein-like [Candidatus Koribacter versatilis Ellin345] gi|94549154|gb|ABF39078.1| DNA uptake lipoprotein-like protein [Candidatus Koribacter versatilis Ellin345] Length = 497 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 7/109 (6%) Query: 136 LVGMSYAQM---IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 + G+ Y +M RD + +RA + +Y I++ + +SP V A+ + + LA + Sbjct: 124 IAGIHYDEMEKPDRDYTHAKRAEE---EYRQMILQ-FPDSPLVPKAKTRLLQVQEILAQR 179 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 E IG++Y+ R +Y AA+ R Q + Y ++EA+ L EA+ A A Sbjct: 180 EFLIGKFYIMREDYPAAVARLQTLSDTYPLFSGSDEALFLLGEAHQAEA 228 >gi|255534236|ref|YP_003094607.1| lipoprotein protein, putative [Flavobacteriaceae bacterium 3519-10] gi|255340432|gb|ACU06545.1| lipoprotein protein, putative [Flavobacteriaceae bacterium 3519-10] Length = 324 Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust. Identities = 28/118 (23%), Positives = 48/118 (40%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 SA+ Y Y+ A + + +P+ + Y+ + + + D DQ +T+L + Sbjct: 73 SAYANYYDKNYKLAGHQFKNFSVTFPQDPRAEDAAYMSALCFYEGSMDYNLDQTSTELAI 132 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + + Y NS K + +L K E R Y K +Y AA F+ VL Sbjct: 133 NELQNFLNNYPNSEKSKNINELIDELTYKLEFKAYENARQYFKMADYKAANVAFENVL 190 >gi|149923399|ref|ZP_01911805.1| peptidase S8 and S53, subtilisin, kexin, sedolisin [Plesiocystis pacifica SIR-1] gi|149815757|gb|EDM75282.1| peptidase S8 and S53, subtilisin, kexin, sedolisin [Plesiocystis pacifica SIR-1] Length = 618 Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 32/50 (64%) Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +EY+ P + ++ +YY G + A+MIRDVP + A +LML+ ++ + + Sbjct: 530 DEYMVGQPIAHDMVRMYYAYGPTLAKMIRDVPPARAAVRLMLRPVANVAK 579 >gi|315023899|gb|EFT36901.1| lipoprotein protein, putative [Riemerella anatipestifer RA-YM] Length = 270 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 10/147 (6%) Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 Y+ + Y Q D DQ+ T+L + + + Y NS K + +L K Sbjct: 86 YMSAICYYQGSMDYNLDQKDTELAINELQSFLNNYPNSERAKNINELIDELSYKLEFKAY 145 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----------MD 244 E R Y K E +AI F+ VL ++ + + L++A LA+ ++ Sbjct: 146 ENARQYYKMLELKSAIISFENVLDDFPSTKLRPKIETMLMDAKAKLAIDSKFELKRERLE 205 Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271 A L+++ YP A+ TL K Sbjct: 206 HAVAYTHLMEKNYPDTDIAKTAVTLRK 232 >gi|34540927|ref|NP_905406.1| lipoprotein protein [Porphyromonas gingivalis W83] gi|34397242|gb|AAQ66305.1| lipoprotein protein, putative [Porphyromonas gingivalis W83] Length = 270 Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust. Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 5/124 (4%) Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 +EY +YP+ + Y G + + D DQ T L +Q + ++ + N Y K Sbjct: 92 QEYYNKYPKGLRAEEARYKAGYCFYEASPDSRLDQSDTYLAIQELQSYLDFFPNGKYAKE 151 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV-----LANYSDAEHAEEAMAR 232 A + +++LA KE + Y G Y+ R +V L Y +H EE + Sbjct: 152 AENMLFGLQDKLAYKEYRTAKLYYNLGLYLGNNYRSCIVTAEAALKTYPYTKHREELVFL 211 Query: 233 LVEA 236 +++A Sbjct: 212 MLQA 215 >gi|262193342|ref|YP_003264551.1| hypothetical protein Hoch_0016 [Haliangium ochraceum DSM 14365] gi|262076689|gb|ACY12658.1| conserved hypothetical protein [Haliangium ochraceum DSM 14365] Length = 293 Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 34/63 (53%) Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 G Y + +Y AAI FQ V Y D+ A++A+ R EA L EAR +++++ Sbjct: 205 GEAYYREQDYGAAIREFQKVFDKYEDSSLADDALFRAGEAAQTLRRCSEARAYFGVLRQK 264 Query: 257 YPQ 259 YP+ Sbjct: 265 YPR 267 >gi|160885705|ref|ZP_02066708.1| hypothetical protein BACOVA_03709 [Bacteroides ovatus ATCC 8483] gi|237719449|ref|ZP_04549930.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|260174433|ref|ZP_05760845.1| hypothetical protein BacD2_21432 [Bacteroides sp. D2] gi|293370226|ref|ZP_06616786.1| outer membrane assembly lipoprotein YfiO [Bacteroides ovatus SD CMC 3f] gi|299146193|ref|ZP_07039261.1| conserved hypothetical protein [Bacteroides sp. 3_1_23] gi|315922700|ref|ZP_07918940.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156108518|gb|EDO10263.1| hypothetical protein BACOVA_03709 [Bacteroides ovatus ATCC 8483] gi|229451309|gb|EEO57100.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|292634723|gb|EFF53252.1| outer membrane assembly lipoprotein YfiO [Bacteroides ovatus SD CMC 3f] gi|298516684|gb|EFI40565.1| conserved hypothetical protein [Bacteroides sp. 3_1_23] gi|313696575|gb|EFS33410.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 267 Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust. Identities = 50/236 (21%), Positives = 93/236 (39%), Gaps = 24/236 (10%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 TD Y+ YE A + + ++++ N+ A +SL M Y+ YQ Sbjct: 28 TDYEYK---YEAAKNYFAKGQYNRSATLLNELITILKGTDKAEESLYMLGMSYYNQKDYQ 84 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---YDQRATKLMLQYMSRIVER 168 AA Y YP + + G + + D P DQ +T +Q + +E Sbjct: 85 TAAQTFITYFNTYPRGTFTELARFHAGKA---LFLDTPEPRLDQSSTYQAIQQLQMFMEY 141 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDA 223 + NS + A+ + +++L KE+ R Y G Y+ + + Q L +Y Sbjct: 142 FPNSTKKQEAQDMIFALQDKLVLKELYSARLYYNLGNYLGNNYESCVITAQNALKDYPYT 201 Query: 224 EHAEEAMARLVEAYVALAL-------MDEAREVVS---LIQERYPQGYWARYVETL 269 ++ EE ++ A +A+ MD RE + + +P+ + + E + Sbjct: 202 DYREELSILVLRARHEMAIYSVEDKKMDRYRETIDEYYAFKNEFPESKYLKEAEKI 257 >gi|167763754|ref|ZP_02435881.1| hypothetical protein BACSTE_02134 [Bacteroides stercoris ATCC 43183] gi|167697870|gb|EDS14449.1| hypothetical protein BACSTE_02134 [Bacteroides stercoris ATCC 43183] Length = 1010 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 41/139 (29%), Positives = 58/139 (41%), Gaps = 33/139 (23%) Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-----RFYVTVG 185 DY YY + + + + +D YD + T L +R+ ++Y NSPY A R YV G Sbjct: 591 DYSYYQLAL-VSGLQKD--YDGKITLL-----NRLADKYPNSPYAVSALYEKGRSYVQ-G 641 Query: 186 RNQLAA-------------------KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 RN A EIG Y + +Y AI ++ V+ Y +E A Sbjct: 642 RNNSQAIATFRELLNKYPESPVSRKAATEIGLLYYQNDDYNRAIEAYKYVITQYPGSEEA 701 Query: 227 EEAMARLVEAYVALALMDE 245 AM L YV +DE Sbjct: 702 RLAMRDLKSIYVEANRVDE 720 >gi|189219588|ref|YP_001940229.1| TPR repeats containing protein [Methylacidiphilum infernorum V4] gi|189186446|gb|ACD83631.1| TPR repeats containing protein [Methylacidiphilum infernorum V4] Length = 350 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 27/133 (20%), Positives = 60/133 (45%) Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 KY A + I +YP D Y +G ++ Q + YDQ +T+ ++ + R Sbjct: 190 KYTDAIATFNRLIDKYPNHSLADDAQYEIGYTWYQASQASEYDQSSTEKAIEGFEDYIVR 249 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y + V+ A+ ++ +++ I ++Y + + AA + V+ ++ A+ Sbjct: 250 YPSGDKVEAAKAHIAELKSKSTLGSFHIAQFYERAKNFKAAYIYYSDVIKQNPTSDQAKI 309 Query: 229 AMARLVEAYVALA 241 A ++V+ + +A Sbjct: 310 AQQKIVQLHPLVA 322 >gi|325996655|gb|ADZ52060.1| competence lipoprotein [Helicobacter pylori 2018] Length = 220 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N A Y++ + + + +++L +Y A+ +EYI ++ NVD Sbjct: 52 NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188 Y+ +L S+ ++ DQ + + +E+Y NS PYV+ + +G+N+ Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNAIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171 Query: 189 L 189 L Sbjct: 172 L 172 >gi|283780651|ref|YP_003371406.1| hypothetical protein Psta_2881 [Pirellula staleyi DSM 6068] gi|283439104|gb|ADB17546.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068] Length = 1076 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 23/113 (20%), Positives = 53/113 (46%), Gaps = 13/113 (11%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 K + F KA + + ++DFP + +SL YSAGK ++ + E+ I +P+S Sbjct: 135 KAEMFGKAATSYAKLAKDFPKSKFVEESLFYQGESLYSAGKKGESLAPYEQLIKDFPKST 194 Query: 129 NVDYVYYLVG-------------MSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + Y +G ++ ++++ P + AT++ ++ ++++ Sbjct: 195 RREETLYALGCTQEELGKYEPALATFETLLKEFPESKLATEVTMRKAEALLQK 247 >gi|300771724|ref|ZP_07081599.1| conserved hypothetical lipoprotein [Sphingobacterium spiritivorum ATCC 33861] gi|300761713|gb|EFK58534.1| conserved hypothetical lipoprotein [Sphingobacterium spiritivorum ATCC 33861] Length = 304 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 37/171 (21%), Positives = 69/171 (40%), Gaps = 3/171 (1%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y++AV F +++ ++KA F+ + + A +A+ Y Y A +++ Sbjct: 40 YQEAVKFYEKKKYTKALALFDDLMQRYRGQAEAEDLYYYTAYTNYRLKDYTSARYHFKQF 99 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +P S + ++ + DQ T+ + + V Y S K A Sbjct: 100 AQTFPNSAKAEECRFMTAYCFYLDSPRSSLDQENTRKAIDELQLFVNLYPESEKAKEAAD 159 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG---EYVAAIPRFQLVLANYSDAEHAEE 228 + R++L K + Y G +Y AA+ + VL Y D ++AEE Sbjct: 160 LIQQLRDKLEKKAFSNAKLYYDMGLNDDYKAAVIALENVLKEYPDTKYAEE 210 >gi|323697458|ref|ZP_08109370.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio sp. ND132] gi|323457390|gb|EGB13255.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio desulfuricans ND132] Length = 1110 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 19/65 (29%), Positives = 38/65 (58%) Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 G Y+ ++G+Y A +FQ ++ Y + + A++A L ++ L +D+A ++V I +R Sbjct: 584 GEYWYRKGDYKKAADQFQQLIQTYPEHQLAKQAAYYLADSLDRLGYLDQAYQIVDYIDKR 643 Query: 257 YPQGY 261 +P Y Sbjct: 644 WPDYY 648 >gi|307638050|gb|ADN80500.1| competence lipoprotein [Helicobacter pylori 908] Length = 220 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N A Y++ + + + +++L +Y A+ +EYI ++ NVD Sbjct: 52 NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188 Y+ +L S+ ++ DQ + + +E+Y NS PYV+ + +G+N+ Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNAIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171 Query: 189 L 189 L Sbjct: 172 L 172 >gi|29348225|ref|NP_811728.1| TPR domain-containing protein [Bacteroides thetaiotaomicron VPI-5482] gi|29340128|gb|AAO77922.1| TPR domain-containing protein [Bacteroides thetaiotaomicron VPI-5482] Length = 1003 Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 23/107 (21%) Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198 ++R+V +Y +SPY A R YV + N A KE+ EIG Sbjct: 606 LNRLVGKYPSSPYAVNAIYEKGRSYVLMDNNSQAITSFKELLEKYPESPVSRKAAAEIGL 665 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 Y + G + AI ++ V+ Y +E A AM + YV L +DE Sbjct: 666 LYYQNGNFDQAINAYKQVIEKYPGSEEARLAMRDMKSIYVDLNRIDE 712 >gi|317010057|gb|ADU80637.1| hypothetical protein HPIN_07240 [Helicobacter pylori India7] Length = 220 Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N A Y++ + + + +++L +Y A+ +EYI ++ NVD Sbjct: 52 NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188 Y+ +L S+ ++ DQ + + +E+Y NS PYV+ + +G+N+ Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNAIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171 Query: 189 L 189 L Sbjct: 172 L 172 >gi|317011700|gb|ADU85447.1| competence lipoprotein ComL [Helicobacter pylori SouthAfrica7] Length = 220 Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N A Y++ + + + +++L +Y A+ +EYI ++ NVD Sbjct: 52 NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188 Y+ +L S+ ++ DQ + + +E+Y NS PYV+ + +G+N+ Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171 Query: 189 L 189 L Sbjct: 172 L 172 >gi|308185160|ref|YP_003929293.1| hypothetical protein HPSJM_07080 [Helicobacter pylori SJM180] gi|308061080|gb|ADO02976.1| hypothetical protein HPSJM_07080 [Helicobacter pylori SJM180] gi|317014772|gb|ADU82208.1| putative lipoprotein [Helicobacter pylori Gambia94/24] Length = 220 Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N A Y++ + + + +++L +Y A+ +EYI ++ NVD Sbjct: 52 NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188 Y+ +L S+ ++ DQ + + +E+Y NS PYV+ + +G+N+ Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171 Query: 189 L 189 L Sbjct: 172 L 172 >gi|298737038|ref|YP_003729568.1| hypothetical protein HPB8_1547 [Helicobacter pylori B8] gi|298356232|emb|CBI67104.1| conserved hypothetical protein [Helicobacter pylori B8] Length = 220 Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N A Y++ + + + +++L +Y A+ +EYI ++ NVD Sbjct: 52 NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188 Y+ +L S+ ++ DQ + + +E+Y NS PYV+ + +G+N+ Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171 Query: 189 L 189 L Sbjct: 172 L 172 >gi|157872303|ref|XP_001684700.1| mitochondrial carrier protein-like protein [Leishmania major] gi|68127770|emb|CAJ06114.1| mitochondrial carrier protein-like protein [Leishmania major strain Friedlin] Length = 338 Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 S A R P++ AT +ML+Y+ ++ ERYTN Y G+ ++G N+L Sbjct: 280 SLALFSRSAPHNI-ATFVMLEYLRKMRERYTNRAYTSGSSVDKSIGLNRL 328 >gi|261420022|ref|YP_003253704.1| hypothetical protein GYMC61_2632 [Geobacillus sp. Y412MC61] gi|319766836|ref|YP_004132337.1| hypothetical protein GYMC52_1763 [Geobacillus sp. Y412MC52] gi|261376479|gb|ACX79222.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. Y412MC61] gi|317111702|gb|ADU94194.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacillus sp. Y412MC52] Length = 1385 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +AV++L+E KA + P +AR++L++ G+YQ+AA+L E Y Sbjct: 1239 QAVVWLQEGQHEKAERQLEAIVAEEP---LAREALMLLGEQYMETGRYQEAAALWERYTD 1295 Query: 123 QYPESKNVD 131 YPE + ++ Sbjct: 1296 WYPEDEELN 1304 >gi|217032410|ref|ZP_03437904.1| hypothetical protein HPB128_164g10 [Helicobacter pylori B128] gi|216945889|gb|EEC24507.1| hypothetical protein HPB128_164g10 [Helicobacter pylori B128] Length = 207 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N A Y++ + + + +++L +Y A+ +EYI ++ NVD Sbjct: 39 NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 98 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188 Y+ +L S+ ++ DQ + + +E+Y NS PYV+ + +G+N+ Sbjct: 99 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 158 Query: 189 L 189 L Sbjct: 159 L 159 >gi|210135563|ref|YP_002302002.1| competence lipoprotein ComL [Helicobacter pylori P12] gi|210133531|gb|ACJ08522.1| competence lipoprotein ComL [Helicobacter pylori P12] gi|317179821|dbj|BAJ57607.1| competence lipoprotein [Helicobacter pylori F32] Length = 220 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N A Y++ + + + +++L +Y A+ +EYI ++ NVD Sbjct: 52 NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188 Y+ +L S+ ++ DQ + + +E+Y NS PYV+ + +G+N+ Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171 Query: 189 L 189 L Sbjct: 172 L 172 >gi|15645988|ref|NP_208169.1| competence lipoprotein (comL) [Helicobacter pylori 26695] gi|108563749|ref|YP_628065.1| competence lipoprotein [Helicobacter pylori HPAG1] gi|188528168|ref|YP_001910855.1| competence lipoprotein [Helicobacter pylori Shi470] gi|217034451|ref|ZP_03439864.1| hypothetical protein HP9810_11g33 [Helicobacter pylori 98-10] gi|254779917|ref|YP_003058023.1| hypothetical protein HELPY_1365 [Helicobacter pylori B38] gi|308183491|ref|YP_003927618.1| hypothetical protein HPPC_06800 [Helicobacter pylori PeCan4] gi|2314548|gb|AAD08420.1| competence lipoprotein (comL) [Helicobacter pylori 26695] gi|107837522|gb|ABF85391.1| competence lipoprotein [Helicobacter pylori HPAG1] gi|188144408|gb|ACD48825.1| competence lipoprotein [Helicobacter pylori Shi470] gi|216943121|gb|EEC22595.1| hypothetical protein HP9810_11g33 [Helicobacter pylori 98-10] gi|254001829|emb|CAX30072.1| Conserved hypothetical protein [Helicobacter pylori B38] gi|261837482|gb|ACX97248.1| competence lipoprotein [Helicobacter pylori 51] gi|261838898|gb|ACX98663.1| competence lipoprotein (comL) [Helicobacter pylori 52] gi|308064154|gb|ADO06041.1| hypothetical protein HPSAT_06685 [Helicobacter pylori Sat464] gi|308065676|gb|ADO07568.1| hypothetical protein HPPC_06800 [Helicobacter pylori PeCan4] gi|315586018|gb|ADU40399.1| competence lipoprotein [Helicobacter pylori 35A] gi|317013165|gb|ADU83773.1| hypothetical protein HPLT_06915 [Helicobacter pylori Lithuania75] gi|317176833|dbj|BAJ54622.1| competence lipoprotein [Helicobacter pylori F16] gi|317178334|dbj|BAJ56122.1| competence lipoprotein [Helicobacter pylori F30] gi|317181315|dbj|BAJ59099.1| competence lipoprotein [Helicobacter pylori F57] gi|332672817|gb|AEE69634.1| competence lipoprotein [Helicobacter pylori 83] Length = 220 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N A Y++ + + + +++L +Y A+ +EYI ++ NVD Sbjct: 52 NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188 Y+ +L S+ ++ DQ + + +E+Y NS PYV+ + +G+N+ Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171 Query: 189 L 189 L Sbjct: 172 L 172 >gi|332291070|ref|YP_004429679.1| outer membrane assembly lipoprotein YfiO [Krokinobacter diaphorus 4H-3-7-5] gi|332169156|gb|AEE18411.1| outer membrane assembly lipoprotein YfiO [Krokinobacter diaphorus 4H-3-7-5] Length = 270 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 69/173 (39%), Gaps = 14/173 (8%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G Y E ++ +P+S + + SY + DQ T + L+ + Sbjct: 77 YELGDYYSGGYQFERFVKSFPQSTKREEAAFKSAESYYRRSPRFNLDQGDTYIALEKLQG 136 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----RGEYVAAIPRFQLVLANY 220 + Y +S V A V +L K EI + Y K RG + AI F L + Sbjct: 137 FINEYPDSEQVDDANAKVQELNTKLERKSYEIAKGYNKIGASRGTFPNAISAFDNFLLDN 196 Query: 221 SDAEHAEEAMARLVEAYVALAL----------MDEAREVVSLIQERYPQGYWA 263 + + E+A+ + LA+ ++ A+ + +++ YPQG +A Sbjct: 197 PGSIYREDALYWKFNSAYQLAMGSVKRLQVERLEAAKAAYNALEKYYPQGKYA 249 >gi|88803410|ref|ZP_01118936.1| hypothetical protein PI23P_12497 [Polaribacter irgensii 23-P] gi|88780976|gb|EAR12155.1| hypothetical protein PI23P_12497 [Polaribacter irgensii 23-P] Length = 270 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 67/177 (37%), Gaps = 5/177 (2%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E Y+ AV + QN+ KA F + + + + M A ++ Y A Sbjct: 18 EQYKMAVKMYETQNYDKAIRLFEKVTPSYRGKPQMERIEFMVAQSNFNEKNYSIAGFYFN 77 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + +S + +L SY D T L + Y NS + A Sbjct: 78 RFTNNFTKSSKKEEAAFLAAYSYKLASPRFSIDPTETNKALDAFQSFINTYPNSDKIIEA 137 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGE-----YVAAIPRFQLVLANYSDAEHAEEAM 230 Y R++L K EI + Y K + Y AAI F +L ++ ++ EEA+ Sbjct: 138 NKYYAEIRSKLEKKYFEIAKTYYKTADYDLRNYKAAIQAFDNLLEDFLGTKYKEEAL 194 >gi|222823961|ref|YP_002575535.1| conserved hypothetical lipoprotein [Campylobacter lari RM2100] gi|222539183|gb|ACM64284.1| conserved hypothetical lipoprotein [Campylobacter lari RM2100] Length = 218 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 17/161 (10%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVY-LDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 +L+ F+L I A FL + + D+Y L S+ E Y++ + L+E+N A Sbjct: 3 KLFIFSLII----AGLFLGACSSKKAEDLYNLSSM-------EWYQQIIKDLQEKNLEAA 51 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 +++ + + + ++LL+ A S +Y+ A +EY+ ++ +S+NV Y+ YL Sbjct: 52 DKHYTSMAAEHIADPLLEQTLLILAQAHISEEEYEMANFYLDEYLNKFGDSQNVAYIRYL 111 Query: 137 -VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + + VP R LML+ + I E + P V+ Sbjct: 112 KIKAKFDSFA--VP--NRNQALMLKTIEEIKEYNQSYPNVQ 148 >gi|114330318|ref|YP_746540.1| TPR repeat-containing protein [Nitrosomonas eutropha C91] gi|114307332|gb|ABI58575.1| Tetratricopeptide TPR_2 repeat protein [Nitrosomonas eutropha C91] Length = 273 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 22/134 (16%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 +A+ + G Y + + E +++++P+S Y +G ++ Y R + Sbjct: 158 AAYALFKDGDYSGSIASFESFLSRHPQSALAPAAAYWIGNAH--------YAMRNFDKAI 209 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 R++E Y +SP V G +A+ +VEIG+ R V ++ N Sbjct: 210 AAQQRLIETYPDSPKVPD-------GLLNMASSQVEIGQKAAARKTLVN-------LITN 255 Query: 220 YSDAEHAEEAMARL 233 Y E AE+A RL Sbjct: 256 YPGTEAAEKAKRRL 269 >gi|15612357|ref|NP_224010.1| hypothetical protein jhp1292 [Helicobacter pylori J99] gi|4155904|gb|AAD06874.1| putative [Helicobacter pylori J99] Length = 220 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N A Y++ + + + +++L +Y A+ +EYI ++ NVD Sbjct: 52 NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188 Y+ +L S+ ++ DQ + + +E+Y NS PYV+ + +G+N+ Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171 Query: 189 L 189 L Sbjct: 172 L 172 >gi|152981712|ref|YP_001354159.1| Tol-Pal cell envelope complex subunit YbgF [Janthinobacterium sp. Marseille] gi|151281789|gb|ABR90199.1| YbgF subunit of Tol-Pal Cell Envelope Complex [Janthinobacterium sp. Marseille] Length = 243 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 31/144 (21%), Positives = 60/144 (41%), Gaps = 22/144 (15%) Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 G + +S SA + AG Y+++ + +++ +YPES Y +G +Y Y Sbjct: 119 GQSEQSAYDSALALFKAGDYKKSGTAFGDFVQRYPESAYAPSAQYWIGNAY--------Y 170 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 QR K + ++++Y ++P A + + +L + AA Sbjct: 171 AQRDYKNAITAQQALLKKYPDNPKAADALLNIASSQTELK--------------DRAAAK 216 Query: 211 PRFQLVLANYSDAEHAEEAMARLV 234 + ++A Y +A A+ A RL Sbjct: 217 KTLESLVAKYPNAPAAQTAKERLA 240 >gi|297380560|gb|ADI35447.1| competence lipoprotein (comL) [Helicobacter pylori v225d] Length = 220 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N A Y++ + + + +++L +Y A+ +EYI ++ NVD Sbjct: 52 NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188 Y+ +L S+ ++ DQ + + +E+Y NS PYV+ + +G+N+ Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171 Query: 189 L 189 L Sbjct: 172 L 172 >gi|255691532|ref|ZP_05415207.1| putative lipoprotein [Bacteroides finegoldii DSM 17565] gi|260622922|gb|EEX45793.1| putative lipoprotein [Bacteroides finegoldii DSM 17565] Length = 267 Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust. Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 24/236 (10%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 TD Y+ YE A + + ++++ N+ A +SL M Y+ YQ Sbjct: 28 TDYEYK---YEAAKNYFAKGQYNRSATLLNELITILKGTDKAEESLYMLGMSYYNQKDYQ 84 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---YDQRATKLMLQYMSRIVER 168 AA Y YP + + G + + D P DQ +T +Q + +E Sbjct: 85 TAAQTFITYFNTYPRGTFTELARFHAGKA---LFLDTPEPRLDQSSTYQAIQQLQMFMEY 141 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDA 223 + NS + A+ + +++L KE+ + Y G Y+ + + Q L +Y Sbjct: 142 FPNSSKKQEAQDMIFALQDKLVLKELYSAKLYYNLGNYLGNNYESCVITAQNALKDYPYT 201 Query: 224 EHAEEAMARLVEAYVALAL-------MDEAREVVS---LIQERYPQGYWARYVETL 269 ++ EE ++ A +A+ MD RE + + +P+ + + E + Sbjct: 202 DYREELSILILRARYEMAIYSVEDKKMDRYRETIDEYYAFKNEFPESKYLKEAEKI 257 >gi|328947786|ref|YP_004365123.1| ATPase AAA lipoprotein [Treponema succinifaciens DSM 2489] gi|328448110|gb|AEB13826.1| putative lipoprotein [Treponema succinifaciens DSM 2489] Length = 603 Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 11/151 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +L LK+ KA EYF + +AG ++ L A + GKY+ A S GEE Sbjct: 214 YLMGILCLKQNENEKALEYFKLS--NGKYAGGTKEILESVAKACFLTGKYELALSFGEEL 271 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER----YTNSPYVK 176 ++++P+ + L + + R L S ++ R N Y++ Sbjct: 272 LSRFPQDTELLKTCALSAFHLGDFDKTEGFVVRVLLLEPDNTSYVLLRAKILMENQDYIR 331 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 + V + A+KE YYL R + + Sbjct: 332 ASSLLDAVEKKNSASKE-----YYLLRTQLL 357 >gi|188996311|ref|YP_001930562.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931378|gb|ACD66008.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 938 Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 87/201 (43%), Gaps = 29/201 (14%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110 D+ ++ Y A F +F +A + F++ + RK+LL A Y+ G+ Sbjct: 563 DLIAKKAYYLYAYTFFSSGDFVRASQEFSKFLEKYKNDDDIYTRKALLRLADSYYNLGER 622 Query: 111 QQAASLGEEYITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 A ++ +++IT+Y +K+ +D Y L+ + DV + + +Y Sbjct: 623 DLAVNIYKDFITKYSGTKDSIDAAYNLIILESKGSSEDVE----------SMIKSFLAKY 672 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 N P ++++ Y +G+ AI +Q V A S+++ + A Sbjct: 673 PNYPLAN--------------ILKIQLAEIYQNKGKIEDAIKIYQEVAA--SNSKESALA 716 Query: 230 MARLVEAYVALALMDEAREVV 250 +L E+Y L +D+A++V+ Sbjct: 717 TYKLAESYYKLNQLDKAKQVL 737 >gi|212692725|ref|ZP_03300853.1| hypothetical protein BACDOR_02223 [Bacteroides dorei DSM 17855] gi|212664661|gb|EEB25233.1| hypothetical protein BACDOR_02223 [Bacteroides dorei DSM 17855] Length = 967 Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 68/180 (37%), Gaps = 29/180 (16%) Query: 80 FNQCSRDFPFA-----GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 F Q +D+ A + SL AFV+ Y I+ YPES+ +D Sbjct: 526 FEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNRLISDYPESQYMDDAL 585 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYM-SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Y G ++ QM + R L+ ++ S + R N Sbjct: 586 YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAAN---------------------- 623 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 EIG Y + +Y AI ++ V+A+Y +E A A L Y+ L +DE S I Sbjct: 624 -EIGLLYYQDDKYPEAIQAYKQVIASYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTI 682 >gi|270264222|ref|ZP_06192489.1| cellulose synthase subunit [Serratia odorifera 4Rx13] gi|270041871|gb|EFA14968.1| cellulose synthase subunit [Serratia odorifera 4Rx13] Length = 1146 Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 14/100 (14%) Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK--EVEIGRYYLKRGEYVAAIP 211 A +L +Q M ER + GA Y+ R Q A ++++ + L RGEY AA+ Sbjct: 560 AQRLKMQAMLEQAERLRAAGDEPGAVAYL---RRQPADTRIDLQLADWALARGEYDAALA 616 Query: 212 RFQLVLA---NYSDAEHAEEAMARLVEAYVALALMDEARE 248 +Q V A N DA E +EAYVA + EAR+ Sbjct: 617 DYQRVRAREPNNPDARLGE------IEAYVAQGKLSEARQ 650 >gi|237709421|ref|ZP_04539902.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229456477|gb|EEO62198.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 967 Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 68/180 (37%), Gaps = 29/180 (16%) Query: 80 FNQCSRDFPFA-----GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 F Q +D+ A + SL AFV+ Y I+ YPES+ +D Sbjct: 526 FEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNRLISDYPESQYMDDAL 585 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYM-SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Y G ++ QM + R L+ ++ S + R N Sbjct: 586 YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAAN---------------------- 623 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 EIG Y + +Y AI ++ V+A+Y +E A A L Y+ L +DE S I Sbjct: 624 -EIGLLYYQDDKYPEAIQAYKQVIASYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTI 682 >gi|208435271|ref|YP_002266937.1| competence lipoprotein [Helicobacter pylori G27] gi|208433200|gb|ACI28071.1| competence lipoprotein [Helicobacter pylori G27] Length = 220 Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N A Y++ + + + +++L +Y A+ +EYI ++ NVD Sbjct: 52 NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKREYVLASFYFDEYIKRFGTKDNVD 111 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188 Y+ +L S+ ++ DQ + + +E+Y NS PYV+ + +G+N+ Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171 Query: 189 L 189 L Sbjct: 172 L 172 >gi|237724975|ref|ZP_04555456.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229436713|gb|EEO46790.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 967 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 68/180 (37%), Gaps = 29/180 (16%) Query: 80 FNQCSRDFPFA-----GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 F Q +D+ A + SL AFV+ Y I+ YPES+ +D Sbjct: 526 FEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNRLISDYPESQYMDDAL 585 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYM-SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Y G ++ QM + R L+ ++ S + R N Sbjct: 586 YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAAN---------------------- 623 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 EIG Y + +Y AI ++ V+A+Y +E A A L Y+ L +DE S I Sbjct: 624 -EIGLLYYQDDKYPEAIQAYKQVIASYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTI 682 >gi|207091899|ref|ZP_03239686.1| hypothetical protein HpylHP_02181 [Helicobacter pylori HPKX_438_AG0C1] Length = 198 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N A Y++ + + + +++L +Y A+ +EYI ++ NVD Sbjct: 30 NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 89 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188 Y+ +L S+ ++ DQ + + +E+Y NS PYV+ + +G+N+ Sbjct: 90 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 149 Query: 189 L 189 L Sbjct: 150 L 150 >gi|15606983|ref|NP_214365.1| hypothetical protein aq_1989 [Aquifex aeolicus VF5] gi|2984229|gb|AAC07758.1| putative protein [Aquifex aeolicus VF5] Length = 853 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 12/96 (12%) Query: 178 ARFYVTVGRNQLAAK--------EVEI-GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 A+ +++G+ +LA K EV + G Y GEY AIP F+ + N E+ + Sbjct: 476 AKAAISLGKGELARKFLYNETPEEVYLTGLSYFIDGEYEKAIPYFEKLTQN---EEYRLK 532 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 A+ +L ++Y L ++AR + +LI +Y Q A+ Sbjct: 533 ALLKLADSYYNLGQKEKARAIYTLILSKYSQNPEAK 568 >gi|56420359|ref|YP_147677.1| hypothetical protein GK1824 [Geobacillus kaustophilus HTA426] gi|47076784|dbj|BAD18326.1| hypothetical protein [Geobacillus kaustophilus] gi|56380201|dbj|BAD76109.1| hypothetical protein [Geobacillus kaustophilus HTA426] Length = 1358 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +AV++L+E KA + P +AR++L++ G+YQ+AA+L E Y Sbjct: 1240 QAVVWLQEGQHEKAERQLEAIVAEEP---LAREALMLLGEQYMETGRYQEAAALWERYAD 1296 Query: 123 QYPESKNVD 131 YPE + ++ Sbjct: 1297 WYPEDEELN 1305 >gi|308062663|gb|ADO04551.1| hypothetical protein HPCU_07045 [Helicobacter pylori Cuz20] Length = 220 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N A Y++ + + + +++L +Y A+ +EYI ++ NVD Sbjct: 52 NLETADNYYSSLQSEHINSPLLPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188 Y+ +L S+ ++ DQ + + +E+Y NS PYV+ + +G+N+ Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNE 171 Query: 189 L 189 L Sbjct: 172 L 172 >gi|253569409|ref|ZP_04846819.1| TPR domain-containing protein [Bacteroides sp. 1_1_6] gi|251841428|gb|EES69509.1| TPR domain-containing protein [Bacteroides sp. 1_1_6] Length = 1003 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 23/107 (21%) Query: 162 MSRIVERYTNSPYVKGA-----RFYVTVGRNQLAA---KEV---------------EIGR 198 ++R+V +Y +SPY A R YV + N A KE+ EIG Sbjct: 606 LNRLVGKYPSSPYAVNAIYEKGRSYVLMDNNGQAITSFKELLEKYPESPVSRKAAAEIGL 665 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 Y + G + AI ++ V+ Y +E A AM + YV L +DE Sbjct: 666 LYYQNGNFDQAINAYKQVIEKYPGSEEARLAMRDMKSIYVDLNRIDE 712 >gi|254426965|ref|ZP_05040672.1| tol-pal system protein YbgF, putative [Alcanivorax sp. DG881] gi|196193134|gb|EDX88093.1| tol-pal system protein YbgF, putative [Alcanivorax sp. DG881] Length = 254 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 32/69 (46%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 KE + KA +F + D+P A KSL + A +Q AG+ A + I QYP+S Sbjct: 181 KEPDLKKAEGHFQAVADDYPDHSKAPKSLYILAVMQAKAGEVSPAKVNLHKLIKQYPDSS 240 Query: 129 NVDYVYYLV 137 L+ Sbjct: 241 EAGQAKSLL 249 >gi|294775054|ref|ZP_06740583.1| putative tol-pal system protein YbgF [Bacteroides vulgatus PC510] gi|294451098|gb|EFG19569.1| putative tol-pal system protein YbgF [Bacteroides vulgatus PC510] Length = 960 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 67/180 (37%), Gaps = 29/180 (16%) Query: 80 FNQCSRDFPFA-----GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 F Q +D+ A + SL AFV+ Y I+ YPES+ +D Sbjct: 519 FEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNRLISDYPESQYMDDAL 578 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYM-SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Y G ++ QM + R L+ ++ S + R N Sbjct: 579 YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAAN---------------------- 616 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 EIG Y + +Y AI ++ V+A Y +E A A L Y+ L +DE S I Sbjct: 617 -EIGLLYYQDDKYPEAIQAYKQVIAGYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTI 675 >gi|300707042|ref|XP_002995746.1| hypothetical protein NCER_101286 [Nosema ceranae BRL01] gi|239604953|gb|EEQ82075.1| hypothetical protein NCER_101286 [Nosema ceranae BRL01] Length = 437 Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust. Identities = 42/214 (19%), Positives = 86/214 (40%), Gaps = 45/214 (21%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 +N ++ Y+ F S+ F F+ ++ L L++A + + GK +QA L E+ +Y Sbjct: 171 KNINEIYDAFGGKSKKFKFSNDEKEVLNLLNAIILHLKGKKEQAILLLEKSTYKYS---- 226 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLML----------QYMSRIVERYTNSPYVKGAR 179 + Y Y + + + +P D T L L Y+ +++ + P + Sbjct: 227 ILYRAYFLTLKNEYISSSLPLDDEITTLYLYSKIFKDKSDTYLKSAIDKSVDLPIEQKDF 286 Query: 180 FYVTVGRNQLAAKEVE--------------------IGRYYLKRGEYVAAIPRFQLVLAN 219 YV + ++ K+VE IG YYLK G + + Sbjct: 287 LYVDLLVFYISKKDVEKVNETINNLKETLTPTLLELIGEYYLKSGNHSKMLDLL------ 340 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + H + L+ A A+++ D+ ++ + ++ Sbjct: 341 ---SSHPDTPGKLLLTALYAISI-DKKKDAIEIL 370 >gi|220904572|ref|YP_002479884.1| hypothetical protein Ddes_1304 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868871|gb|ACL49206.1| hypothetical protein Ddes_1304 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 982 Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust. Identities = 47/194 (24%), Positives = 77/194 (39%), Gaps = 19/194 (9%) Query: 62 EKAVLFLKEQNFS--KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 E + +F K+Q + K Y SR P A +AR L A Y KY +A + Sbjct: 587 EMSAVFAKDQGGALWKVYTDLAASSRTAPAAVLAR---LKEAMWLYWDKKYTEAMGKAAD 643 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I YPE+ NV L+ S+ Q + + L RI+ + P V+ R Sbjct: 644 FIDAYPENANVPQAKDLIWASFQQELNN--------SLAEGNYGRILILWNGFPLVR-ER 694 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + R + A + + L+RG+ AA+ L + D + E A Y+ Sbjct: 695 YGALDPRMRYA-----LAQGMLERGDEAAALGMMAEFLKSPMDPNYGEAAFTEFFNRYLK 749 Query: 240 LALMDEAREVVSLI 253 D+ ++ L+ Sbjct: 750 AGAWDKVLDLGKLV 763 >gi|319639870|ref|ZP_07994599.1| hypothetical protein HMPREF9011_00196 [Bacteroides sp. 3_1_40A] gi|317388534|gb|EFV69384.1| hypothetical protein HMPREF9011_00196 [Bacteroides sp. 3_1_40A] Length = 960 Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 67/180 (37%), Gaps = 29/180 (16%) Query: 80 FNQCSRDFPFA-----GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 F Q +D+ A + SL AFV+ Y I+ YPES+ +D Sbjct: 519 FEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNRLISDYPESQYMDDAL 578 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYM-SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Y G ++ QM + R L+ ++ S + R N Sbjct: 579 YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAAN---------------------- 616 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 EIG Y + +Y AI ++ V+A Y +E A A L Y+ L +DE S I Sbjct: 617 -EIGLLYYQDDKYPEAIQAYKQVIAGYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTI 675 >gi|195953482|ref|YP_002121772.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp. Y04AAS1] gi|195933094|gb|ACG57794.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp. Y04AAS1] Length = 272 Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 26/44 (59%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A+ Y +G YQ+A L +E+I + P SK + YY +GM+ M Sbjct: 154 AYTAYQSGDYQKAKRLFKEFILKNPHSKLTNNAYYWLGMAEKAM 197 >gi|150003900|ref|YP_001298644.1| hypothetical protein BVU_1333 [Bacteroides vulgatus ATCC 8482] gi|149932324|gb|ABR39022.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] Length = 967 Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 67/180 (37%), Gaps = 29/180 (16%) Query: 80 FNQCSRDFPFA-----GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 F Q +D+ A + SL AFV+ Y I+ YPES+ +D Sbjct: 526 FEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNRLISDYPESQYMDDAL 585 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYM-SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Y G ++ QM + R L+ ++ S + R N Sbjct: 586 YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAAN---------------------- 623 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 EIG Y + +Y AI ++ V+A Y +E A A L Y+ L +DE S I Sbjct: 624 -EIGLLYYQDDKYPEAIQAYKQVIAGYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTI 682 >gi|109946693|ref|YP_663921.1| competence lipoprotein [Helicobacter acinonychis str. Sheeba] gi|109713914|emb|CAJ98922.1| competence lipoprotein [Helicobacter acinonychis str. Sheeba] Length = 217 Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 3/121 (2%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N A Y++ + + + +++L +Y A+ +EYI ++ NVD Sbjct: 49 NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTEDNVD 108 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PYVKGARFYVTVGRNQ 188 Y+ +L S+ ++ DQ + + +E+Y NS PYV+ + +G+N+ Sbjct: 109 YLTFLKLQSHYYAFKNHSKDQEFISNSIVNLGEFIEKYPNSRYRPYVEYMQVKFILGQNE 168 Query: 189 L 189 L Sbjct: 169 L 169 >gi|254880860|ref|ZP_05253570.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA] gi|254833653|gb|EET13962.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA] Length = 967 Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 67/180 (37%), Gaps = 29/180 (16%) Query: 80 FNQCSRDFPFA-----GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 F Q +D+ A + SL AFV+ Y I+ YPES+ +D Sbjct: 526 FEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNRLISDYPESQYMDDAL 585 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYM-SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Y G ++ QM + R L+ ++ S + R N Sbjct: 586 YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAAN---------------------- 623 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 EIG Y + +Y AI ++ V+A Y +E A A L Y+ L +DE S I Sbjct: 624 -EIGLLYYQDDKYPEAIQAYKQVIAGYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTI 682 >gi|32267088|ref|NP_861120.1| paralysed flagella protein PflA [Helicobacter hepaticus ATCC 51449] gi|32263140|gb|AAP78186.1| paralysed flagella protein PflA [Helicobacter hepaticus ATCC 51449] Length = 789 Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 11/131 (8%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQY-SAGKYQQAASL 116 Y + + QN+ +A + ++ +P A+ LL + A + S + Sbjct: 184 TYSQIKTLMNNQNYIEAVKLIDETLIGYPKTIFAKDLLLFRLRALESFDSVENSDMIVDM 243 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 G ++I +YP NV V Y +G +YA M +P + + Y R + Y NS Y+ Sbjct: 244 GTKWIKKYPTDANVPEVLYYLGNAYADM--RIPQEAK------YYFDRTISEYPNSRYMP 295 Query: 177 GARFYVTVGRN 187 A+ + N Sbjct: 296 LAKMALAKNFN 306 >gi|299135640|ref|ZP_07028824.1| outer membrane assembly lipoprotein YfiO [Acidobacterium sp. MP5ACTX8] gi|298601764|gb|EFI57918.1| outer membrane assembly lipoprotein YfiO [Acidobacterium sp. MP5ACTX8] Length = 611 Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 29/53 (54%) Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 +A +E E+G +Y + A I R+Q V+ Y H ++A+ L +AY A A Sbjct: 252 MATREAELGAFYASHENWAATIARYQTVIDQYPQYSHMDDALIGLGDAYAAQA 304 >gi|302038038|ref|YP_003798360.1| hypothetical protein NIDE2729 [Candidatus Nitrospira defluvii] gi|300606102|emb|CBK42435.1| protein of unknown function [Candidatus Nitrospira defluvii] Length = 489 Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 28/52 (53%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A SL A +S G+Y A L E Y+T YP+S+ ++ +G +Y QM Sbjct: 29 AETSLWYQASTAFSDGRYSAAIHLYERYLTTYPKSRRALEAHWDLGQAYEQM 80 >gi|42522407|ref|NP_967787.1| adventurous gliding motility protein U [Bdellovibrio bacteriovorus HD100] gi|39574939|emb|CAE78780.1| adventurous gliding motility protein U [Bdellovibrio bacteriovorus HD100] Length = 1066 Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust. Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 13/170 (7%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 S+AYE + R+FP + A + Y GKY +A+ + + P+SK Sbjct: 474 SQAYEGYQLYLREFPDSATAADMHFYFGELLYDMGKYDEASMQYKWVVDNAPQSK----- 528 Query: 134 YYLVGMSYAQMI----RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 G S +I R +P DQ K + + ++K ++YV + Sbjct: 529 --FYGKSAQNLILSVERSIPSDQEMQKRVGNSTDPVPLEPKVDRFIKAGQWYVEKFPSSE 586 Query: 190 AAKEVE--IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A E++ +GR Y + + A F+ ++ + + ++AE + L++ Y Sbjct: 587 KAVEIKFRMGRLYYQSNHFDQATAHFRDIVKQHPNTKYAEYSANLLLDIY 636 >gi|265754620|ref|ZP_06089672.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|263234734|gb|EEZ20302.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 967 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 68/180 (37%), Gaps = 29/180 (16%) Query: 80 FNQCSRDFPFA-----GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 F Q +D+ A + SL AFV+ Y I+ YPES+ +D Sbjct: 526 FEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNRLISDYPESQYMDDAL 585 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYM-SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Y G ++ QM + R L+ ++ S + R N Sbjct: 586 YEQGRAFVQMEDNANAIARFNILVKKFPESSVARRAAN---------------------- 623 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 EIG Y + +Y AI ++ V+A+Y +E A A L Y+ L +DE S I Sbjct: 624 -EIGLLYYQDDKYPEAIQAYKQVIASYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTI 682 >gi|88810550|ref|ZP_01125807.1| hypothetical protein NB231_15758 [Nitrococcus mobilis Nb-231] gi|88792180|gb|EAR23290.1| hypothetical protein NB231_15758 [Nitrococcus mobilis Nb-231] Length = 275 Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 30/58 (51%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 E++F +A + F + DFP +G + L F+Q+ GK +A + I +YP S Sbjct: 200 ERHFDQAMQQFQKVLDDFPHSGKRPGAQLKIGFIQHEQGKLDRARKTLGKVIQRYPNS 257 >gi|154491758|ref|ZP_02031384.1| hypothetical protein PARMER_01374 [Parabacteroides merdae ATCC 43184] gi|154087999|gb|EDN87044.1| hypothetical protein PARMER_01374 [Parabacteroides merdae ATCC 43184] Length = 999 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 22/144 (15%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F+Q KY++ GEE ++ YP+SKN +Y +VG SY + ++A +++ +Y Sbjct: 218 FIQ---SKYEKVVKEGEELLSLYPDSKNNSEMYRIVGDSYYHLGD----QEKAIRMLSKY 270 Query: 162 MSRIVERYTNSPYVKGARFYV-------------TVGRNQLAAKE--VEIGRYYLKRGEY 206 +S + Y+ G ++ TV +N + + +G+ YLK G+ Sbjct: 271 VSSTENPLRSDLYILGVCYFNKGNYSNTVNALSRTVRQNDELTQNAYLYLGQSYLKLGDK 330 Query: 207 VAAIPRFQLVLANYSDAEHAEEAM 230 A F+ + D + E AM Sbjct: 331 NNARMAFEAAATSSFDKQIKEVAM 354 Searching..................................................done Results from round 2 >gi|254781174|ref|YP_003065587.1| outer membrane assembly lipoprotein YfiO [Candidatus Liberibacter asiaticus str. psy62] gi|254040851|gb|ACT57647.1| outer membrane assembly lipoprotein YfiO [Candidatus Liberibacter asiaticus str. psy62] Length = 271 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 271/271 (100%), Positives = 271/271 (100%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV Sbjct: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY Sbjct: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF Sbjct: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL Sbjct: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ALMDEAREVVSLIQERYPQGYWARYVETLVK Sbjct: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271 >gi|299131916|ref|ZP_07025111.1| outer membrane assembly lipoprotein YfiO [Afipia sp. 1NLS2] gi|298592053|gb|EFI52253.1| outer membrane assembly lipoprotein YfiO [Afipia sp. 1NLS2] Length = 314 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 84/268 (31%), Positives = 134/268 (50%), Gaps = 12/268 (4%) Query: 5 LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64 LGR +C FA+ + A G + D + ++Y + Sbjct: 34 LGRQLC-----------FAMGVIVLAAPLGGCGTGNLWDKFFAKDETFVDQPADKLYNEG 82 Query: 65 VLFLKEQN-FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + L E+N A + F + R P++ ARKSLLMSA+ Y +G Y + + YI+ Sbjct: 83 LFLLNEKNDRKGAIKKFEEVDRQHPYSDWARKSLLMSAYASYQSGDYDECIANANRYISL 142 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 +P S + Y YLV +S I DV DQ T+ + + ++ +Y NS Y A+ + Sbjct: 143 HPGSPDAAYAQYLVAVSNYDQIPDVSRDQGRTEKAIAALEEVIRKYPNSEYATTAKKKIE 202 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 R+QLA +E+ IGRYY+ + +Y AI RF++V+ Y H EEA+ARL EAY+A+ ++ Sbjct: 203 GARDQLAGREMTIGRYYMDKRDYTGAINRFKVVVTQYQTTRHVEEALARLTEAYMAIGVV 262 Query: 244 DEAREVVSLIQERYPQGYWARYVETLVK 271 EA+ +++ +P W + LVK Sbjct: 263 SEAQTAAAVLGHNFPDSRWYKDAYNLVK 290 >gi|260462098|ref|ZP_05810342.1| outer membrane assembly lipoprotein YfiO [Mesorhizobium opportunistum WSM2075] gi|259031958|gb|EEW33225.1| outer membrane assembly lipoprotein YfiO [Mesorhizobium opportunistum WSM2075] Length = 362 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 84/253 (33%), Positives = 131/253 (51%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 L L + + FL V +Y + + L +A + Sbjct: 86 LRSVFLALSVVVPSLFLSACMSSEKDIDLSTYVDQTEPADVLYNQGLANLNAGRLDEASK 145 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F+ R P++ ARKS++M AF Y G Y +A S + Y+ YP + + Y Y++G Sbjct: 146 KFDAVDRQHPYSEWARKSMVMGAFADYRKGSYDEAISSAKRYLALYPSTDDAPYAQYIIG 205 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY + I+DV DQ+ + LQ M +V R+ S YV A+ + +QLA KE++IGR Sbjct: 206 LSYYRQIKDVTQDQKEARQTLQTMQDLVTRWPTSEYVDDAKEKIRFANDQLAGKEMQIGR 265 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYL+R EY+AA+ RF+ V+ NYS+ H EEA+ARL E+Y A+ L EA+ +++ YP Sbjct: 266 YYLERREYIAAVKRFRTVVENYSNTRHVEEALARLTESYYAMGLTSEAQTAAAVLGTNYP 325 Query: 259 QGYWARYVETLVK 271 W + L++ Sbjct: 326 DSPWYKDSYKLLQ 338 >gi|83592277|ref|YP_426029.1| competence lipoprotein ComL [Rhodospirillum rubrum ATCC 11170] gi|83575191|gb|ABC21742.1| competence lipoprotein ComL, putative [Rhodospirillum rubrum ATCC 11170] Length = 292 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 73/251 (29%), Positives = 129/251 (51%), Gaps = 5/251 (1%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 ++ F L + Y++ R E+Y +AV L +++ A + Sbjct: 19 FRALAAAFLIGGALALSACSSKKDEPEYVE-----RPVEELYNEAVDLLNTSSYALAAKA 73 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F++ R P++ A K+ +MSA+ Y Y A +I +P ++++ Y YYL G+ Sbjct: 74 FDEVERQHPYSSWATKAQIMSAYALYENEAYDDAVVAINRFIELHPGNRDIAYAYYLRGL 133 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y + I DV DQ+ T+ + + +V R+ +SPY + AR + + R+ +A KE+ +GR+ Sbjct: 134 CYYEQISDVRRDQQITRQAMSNLRDVVTRFPDSPYARDARLKIDLARDHIAGKEMSVGRF 193 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YLKR +++AA+ RF++V+ Y H EA+ R+VE L L DEA+ V +++ +P Sbjct: 194 YLKRQDFLAALNRFRVVVEQYDQTTHVPEALYRMVEINTLLGLPDEAKRVAAVLGHNFPG 253 Query: 260 GYWARYVETLV 270 W L+ Sbjct: 254 SDWYGDAYRLI 264 >gi|225627872|ref|ZP_03785909.1| outer membrane assembly lipoprotein YfiO [Brucella ceti str. Cudo] gi|237815822|ref|ZP_04594819.1| outer membrane assembly lipoprotein YfiO [Brucella abortus str. 2308 A] gi|225617877|gb|EEH14922.1| outer membrane assembly lipoprotein YfiO [Brucella ceti str. Cudo] gi|237789120|gb|EEP63331.1| outer membrane assembly lipoprotein YfiO [Brucella abortus str. 2308 A] Length = 323 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 90/253 (35%), Positives = 139/253 (54%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K AL + L G ++ V + ++Y + + L +A + Sbjct: 45 VTKTALLSGTIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAK 104 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F R P+ ARK+L+M+AF Y G Y++A S+ + Y T YP S Y YY++G Sbjct: 105 KFAAIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIG 164 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY + I DV DQ A++ + M +++R+ NS Y A+ + V R+QLA KE++IGR Sbjct: 165 LSYFRQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGR 224 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYL+R EY+AAI RF+ V+ YS+ EEA+ARLVEAY AL L EA+ S++ + +P Sbjct: 225 YYLERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFP 284 Query: 259 QGYWARYVETLVK 271 W + L++ Sbjct: 285 DSQWYKDSYKLLQ 297 >gi|17986870|ref|NP_539504.1| COML, competence lipoprotein [Brucella melitensis bv. 1 str. 16M] gi|17982509|gb|AAL51768.1| coml, competence lipoprotein [Brucella melitensis bv. 1 str. 16M] Length = 309 Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats. Identities = 90/253 (35%), Positives = 139/253 (54%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K AL + L G ++ V + ++Y + + L +A + Sbjct: 31 VTKTALLSGTIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAK 90 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F R P+ ARK+L+M+AF Y G Y++A S+ + Y T YP S Y YY++G Sbjct: 91 KFAAIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIG 150 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY + I DV DQ A++ + M +++R+ NS Y A+ + V R+QLA KE++IGR Sbjct: 151 LSYFRQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGR 210 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYL+R EY+AAI RF+ V+ YS+ EEA+ARLVEAY AL L EA+ S++ + +P Sbjct: 211 YYLERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFP 270 Query: 259 QGYWARYVETLVK 271 W + L++ Sbjct: 271 DSQWYKDSYKLLQ 283 >gi|92116844|ref|YP_576573.1| putative lipoprotein [Nitrobacter hamburgensis X14] gi|91799738|gb|ABE62113.1| putative lipoprotein [Nitrobacter hamburgensis X14] Length = 325 Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 79/256 (30%), Positives = 128/256 (50%), Gaps = 4/256 (1%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDV---RYQREVYEKAVLFLK-EQNFSK 75 K L + I L G + D +L ++Y + + + +++ Sbjct: 46 RKLRLVVGLVILGTTLSGCGTGALWDKFLAKDEQTFSDEPADKLYNEGLFLMNNQRDLKA 105 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + F++ R+ P++ ARKSLLMSA+ Y AG Y Y+T +P S + Y Y Sbjct: 106 ATKKFDEVDREHPYSEWARKSLLMSAYASYQAGDYDTCIGSASRYVTLHPGSPDAAYAQY 165 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 L+ S I D+ DQ T+ + + ++ +Y S Y A+ + R+QLA KE+ Sbjct: 166 LIAASNYDQIPDISRDQARTEKAMASLEEVIRKYPTSEYAGEAKKKLQGARDQLAGKEMA 225 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 IGRYY++R +Y AI RF+ V+ Y H EEA+ARL EAY+A+ ++ EA+ +++ Sbjct: 226 IGRYYMERRDYTGAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGH 285 Query: 256 RYPQGYWARYVETLVK 271 +P W + LVK Sbjct: 286 NFPNSRWYKDAYNLVK 301 >gi|23502293|ref|NP_698420.1| competence protein ComL [Brucella suis 1330] gi|62290315|ref|YP_222108.1| competence protein ComL [Brucella abortus bv. 1 str. 9-941] gi|82700239|ref|YP_414813.1| TPR repeat-containing protein [Brucella melitensis biovar Abortus 2308] gi|161619370|ref|YP_001593257.1| hypothetical protein BCAN_A1455 [Brucella canis ATCC 23365] gi|163843677|ref|YP_001628081.1| hypothetical protein BSUIS_A1473 [Brucella suis ATCC 23445] gi|189024549|ref|YP_001935317.1| TPR repeat-containing protein [Brucella abortus S19] gi|225852904|ref|YP_002733137.1| outer membrane assembly lipoprotein YfiO [Brucella melitensis ATCC 23457] gi|254689617|ref|ZP_05152871.1| COML, competence lipoprotein [Brucella abortus bv. 6 str. 870] gi|254694107|ref|ZP_05155935.1| COML, competence lipoprotein [Brucella abortus bv. 3 str. Tulya] gi|254697759|ref|ZP_05159587.1| COML, competence lipoprotein [Brucella abortus bv. 2 str. 86/8/59] gi|254702144|ref|ZP_05163972.1| COML, competence lipoprotein [Brucella suis bv. 5 str. 513] gi|254704680|ref|ZP_05166508.1| COML, competence lipoprotein [Brucella suis bv. 3 str. 686] gi|254708095|ref|ZP_05169923.1| COML, competence lipoprotein [Brucella pinnipedialis M163/99/10] gi|254710464|ref|ZP_05172275.1| COML, competence lipoprotein [Brucella pinnipedialis B2/94] gi|254714457|ref|ZP_05176268.1| COML, competence lipoprotein [Brucella ceti M644/93/1] gi|254717355|ref|ZP_05179166.1| COML, competence lipoprotein [Brucella ceti M13/05/1] gi|254730648|ref|ZP_05189226.1| COML, competence lipoprotein [Brucella abortus bv. 4 str. 292] gi|256031958|ref|ZP_05445572.1| COML, competence lipoprotein [Brucella pinnipedialis M292/94/1] gi|256045053|ref|ZP_05447954.1| COML, competence lipoprotein [Brucella melitensis bv. 1 str. Rev.1] gi|256061480|ref|ZP_05451624.1| COML, competence lipoprotein [Brucella neotomae 5K33] gi|256113976|ref|ZP_05454759.1| COML, competence lipoprotein [Brucella melitensis bv. 3 str. Ether] gi|256160157|ref|ZP_05457851.1| COML, competence lipoprotein [Brucella ceti M490/95/1] gi|256255363|ref|ZP_05460899.1| COML, competence lipoprotein [Brucella ceti B1/94] gi|256263614|ref|ZP_05466146.1| TPR repeat-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|256369838|ref|YP_003107349.1| competence protein ComL [Brucella microti CCM 4915] gi|260169095|ref|ZP_05755906.1| COML, competence lipoprotein [Brucella sp. F5/99] gi|260546858|ref|ZP_05822597.1| TPR repeat-containing protein [Brucella abortus NCTC 8038] gi|260565348|ref|ZP_05835832.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M] gi|260566072|ref|ZP_05836542.1| TPR repeat-containing protein [Brucella suis bv. 4 str. 40] gi|260755144|ref|ZP_05867492.1| competence protein ComL [Brucella abortus bv. 6 str. 870] gi|260758363|ref|ZP_05870711.1| competence protein ComL [Brucella abortus bv. 4 str. 292] gi|260762189|ref|ZP_05874532.1| competence protein ComL [Brucella abortus bv. 2 str. 86/8/59] gi|261214405|ref|ZP_05928686.1| competence protein ComL [Brucella abortus bv. 3 str. Tulya] gi|261219185|ref|ZP_05933466.1| competence protein ComL [Brucella ceti M13/05/1] gi|261222564|ref|ZP_05936845.1| competence protein ComL [Brucella ceti B1/94] gi|261315597|ref|ZP_05954794.1| competence protein ComL [Brucella pinnipedialis M163/99/10] gi|261318035|ref|ZP_05957232.1| competence protein ComL [Brucella pinnipedialis B2/94] gi|261322246|ref|ZP_05961443.1| competence protein ComL [Brucella ceti M644/93/1] gi|261325486|ref|ZP_05964683.1| competence protein ComL [Brucella neotomae 5K33] gi|261752713|ref|ZP_05996422.1| competence protein ComL [Brucella suis bv. 5 str. 513] gi|261755373|ref|ZP_05999082.1| competence protein ComL [Brucella suis bv. 3 str. 686] gi|261758600|ref|ZP_06002309.1| TPR repeat-containing protein [Brucella sp. F5/99] gi|265989066|ref|ZP_06101623.1| competence protein ComL [Brucella pinnipedialis M292/94/1] gi|265991479|ref|ZP_06104036.1| competence protein ComL [Brucella melitensis bv. 1 str. Rev.1] gi|265995317|ref|ZP_06107874.1| competence protein ComL [Brucella melitensis bv. 3 str. Ether] gi|265998529|ref|ZP_06111086.1| competence protein ComL [Brucella ceti M490/95/1] gi|294852749|ref|ZP_06793422.1| UPF0169 lipoprotein [Brucella sp. NVSL 07-0026] gi|297248702|ref|ZP_06932420.1| lipoprotein [Brucella abortus bv. 5 str. B3196] gi|23348269|gb|AAN30335.1| competence protein ComL, putative [Brucella suis 1330] gi|62196447|gb|AAX74747.1| ComL, hypothetical competence protein [Brucella abortus bv. 1 str. 9-941] gi|82616340|emb|CAJ11397.1| TPR repeat:Protein of unknown function UPF0169 [Brucella melitensis biovar Abortus 2308] gi|161336181|gb|ABX62486.1| Hypothetical protein BCAN_A1455 [Brucella canis ATCC 23365] gi|163674400|gb|ABY38511.1| Hypothetical protein BSUIS_A1473 [Brucella suis ATCC 23445] gi|189020121|gb|ACD72843.1| TPR repeat-containing protein [Brucella abortus S19] gi|225641269|gb|ACO01183.1| outer membrane assembly lipoprotein YfiO [Brucella melitensis ATCC 23457] gi|256000001|gb|ACU48400.1| competence protein ComL [Brucella microti CCM 4915] gi|260095908|gb|EEW79785.1| TPR repeat-containing protein [Brucella abortus NCTC 8038] gi|260151416|gb|EEW86510.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M] gi|260155590|gb|EEW90670.1| TPR repeat-containing protein [Brucella suis bv. 4 str. 40] gi|260668681|gb|EEX55621.1| competence protein ComL [Brucella abortus bv. 4 str. 292] gi|260672621|gb|EEX59442.1| competence protein ComL [Brucella abortus bv. 2 str. 86/8/59] gi|260675252|gb|EEX62073.1| competence protein ComL [Brucella abortus bv. 6 str. 870] gi|260916012|gb|EEX82873.1| competence protein ComL [Brucella abortus bv. 3 str. Tulya] gi|260921148|gb|EEX87801.1| competence protein ComL [Brucella ceti B1/94] gi|260924274|gb|EEX90842.1| competence protein ComL [Brucella ceti M13/05/1] gi|261294936|gb|EEX98432.1| competence protein ComL [Brucella ceti M644/93/1] gi|261297258|gb|EEY00755.1| competence protein ComL [Brucella pinnipedialis B2/94] gi|261301466|gb|EEY04963.1| competence protein ComL [Brucella neotomae 5K33] gi|261304623|gb|EEY08120.1| competence protein ComL [Brucella pinnipedialis M163/99/10] gi|261738584|gb|EEY26580.1| TPR repeat-containing protein [Brucella sp. F5/99] gi|261742466|gb|EEY30392.1| competence protein ComL [Brucella suis bv. 5 str. 513] gi|261745126|gb|EEY33052.1| competence protein ComL [Brucella suis bv. 3 str. 686] gi|262553153|gb|EEZ08987.1| competence protein ComL [Brucella ceti M490/95/1] gi|262766430|gb|EEZ12219.1| competence protein ComL [Brucella melitensis bv. 3 str. Ether] gi|263002263|gb|EEZ14838.1| competence protein ComL [Brucella melitensis bv. 1 str. Rev.1] gi|263093666|gb|EEZ17671.1| TPR repeat-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|264661263|gb|EEZ31524.1| competence protein ComL [Brucella pinnipedialis M292/94/1] gi|294821338|gb|EFG38337.1| UPF0169 lipoprotein [Brucella sp. NVSL 07-0026] gi|297175871|gb|EFH35218.1| lipoprotein [Brucella abortus bv. 5 str. B3196] gi|326409446|gb|ADZ66511.1| TPR repeat-containing protein [Brucella melitensis M28] gi|326539152|gb|ADZ87367.1| outer membrane assembly lipoprotein YfiO [Brucella melitensis M5-90] Length = 287 Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 90/253 (35%), Positives = 139/253 (54%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K AL + L G ++ V + ++Y + + L +A + Sbjct: 9 VTKTALLSGTIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAK 68 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F R P+ ARK+L+M+AF Y G Y++A S+ + Y T YP S Y YY++G Sbjct: 69 KFAAIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIG 128 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY + I DV DQ A++ + M +++R+ NS Y A+ + V R+QLA KE++IGR Sbjct: 129 LSYFRQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGR 188 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYL+R EY+AAI RF+ V+ YS+ EEA+ARLVEAY AL L EA+ S++ + +P Sbjct: 189 YYLERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFP 248 Query: 259 QGYWARYVETLVK 271 W + L++ Sbjct: 249 DSQWYKDSYKLLQ 261 >gi|86749129|ref|YP_485625.1| putative lipoprotein [Rhodopseudomonas palustris HaA2] gi|86572157|gb|ABD06714.1| putative lipoprotein [Rhodopseudomonas palustris HaA2] Length = 301 Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 77/256 (30%), Positives = 129/256 (50%), Gaps = 4/256 (1%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDV---RYQREVYEKAVLFLKE-QNFSK 75 L + L G + D +L D ++Y + + + + ++ Sbjct: 22 RSLPLVASLMLLALPLGGCGTGAIWDKFLAKDEDKFNDEPADKLYNEGLYLMNKEKDLKG 81 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + F + R P++ ARKSLLMSA+ Y AG Y Y+T +P S + Y Y Sbjct: 82 ASKKFEEVDRQHPYSDWARKSLLMSAYSFYQAGDYDSCIGSATRYVTLHPGSPDAAYAQY 141 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 L+ S+ I D+ DQ T+ + + ++ +Y S Y A+ + R+QLA KE++ Sbjct: 142 LIAASHYDQIPDISRDQGRTEKAIAALEEVIRKYPTSEYANQAKQKLEGARDQLAGKEMD 201 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 +GR+Y+++ +Y AAI RF+ V+ Y H EEA+ARL EAY+A+ ++ EA+ +++ Sbjct: 202 VGRFYMEKRDYAAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGH 261 Query: 256 RYPQGYWARYVETLVK 271 +P W + TLVK Sbjct: 262 NFPDSRWYKDAYTLVK 277 >gi|148558858|ref|YP_001259314.1| putative competence protein ComL [Brucella ovis ATCC 25840] gi|148370115|gb|ABQ60094.1| putative competence protein ComL [Brucella ovis ATCC 25840] Length = 287 Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 90/253 (35%), Positives = 138/253 (54%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K AL + L G ++ V + ++Y + + L +A + Sbjct: 9 VTKTALLSGTIAVLIPLAGCASKNDDIDLTKYVETINPADKLYNEGLANLDAGRLDEAAK 68 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F R P+ ARK+L+M+AF Y G Y++A S+ + Y T YP S Y YY++G Sbjct: 69 KFAAIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIG 128 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY I DV DQ A++ + M +++R+ NS Y A+ + V R+QLA KE++IGR Sbjct: 129 LSYFHQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGR 188 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYL+R EY+AAI RF+ V+ YS+ EEA+ARLVEAY AL L EA+ S++ + +P Sbjct: 189 YYLERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFP 248 Query: 259 QGYWARYVETLVK 271 W + L++ Sbjct: 249 DSQWYKDSYKLLQ 261 >gi|254719454|ref|ZP_05181265.1| COML, competence lipoprotein [Brucella sp. 83/13] gi|265984459|ref|ZP_06097194.1| competence protein ComL [Brucella sp. 83/13] gi|306839231|ref|ZP_07472048.1| outer membrane assembly lipoprotein YfiO [Brucella sp. NF 2653] gi|306843231|ref|ZP_07475841.1| outer membrane assembly lipoprotein YfiO [Brucella sp. BO2] gi|306844321|ref|ZP_07476913.1| outer membrane assembly lipoprotein YfiO [Brucella sp. BO1] gi|264663051|gb|EEZ33312.1| competence protein ComL [Brucella sp. 83/13] gi|306275393|gb|EFM57134.1| outer membrane assembly lipoprotein YfiO [Brucella sp. BO1] gi|306286554|gb|EFM58133.1| outer membrane assembly lipoprotein YfiO [Brucella sp. BO2] gi|306405778|gb|EFM62040.1| outer membrane assembly lipoprotein YfiO [Brucella sp. NF 2653] Length = 287 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 90/253 (35%), Positives = 139/253 (54%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K AL + L G ++ V + ++Y + + L +A + Sbjct: 9 VTKTALLSGAIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAK 68 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F R P+ ARK+L+M+AF Y G Y++A S+ + Y T YP S Y YY++G Sbjct: 69 KFAAIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIG 128 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY + I DV DQ A++ + M +++R+ NS Y A+ + V R+QLA KE++IGR Sbjct: 129 LSYFRQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGR 188 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYL+R EY+AAI RF+ V+ YS+ EEA+ARLVEAY AL L EA+ S++ + +P Sbjct: 189 YYLERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFP 248 Query: 259 QGYWARYVETLVK 271 W + L++ Sbjct: 249 DSQWYKDSYKLLQ 261 >gi|316933197|ref|YP_004108179.1| outer membrane assembly lipoprotein YfiO [Rhodopseudomonas palustris DX-1] gi|315600911|gb|ADU43446.1| outer membrane assembly lipoprotein YfiO [Rhodopseudomonas palustris DX-1] Length = 302 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 4/254 (1%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL-KEQNFSKAY 77 + L + + C + + D ++Y + + + ++++ A Sbjct: 28 MIVGVLALSLPLGGCGTGALW---DKFLAKDDKMVDEPADKLYNEGLYLMNQDKDTKGAA 84 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + F + R P++ ARKSLLMSA+ Y AG Y Y+T +P S + Y YL+ Sbjct: 85 KKFEEVDRQHPYSDWARKSLLMSAYAYYQAGDYDSCIGAATRYVTLHPGSPDAAYAQYLI 144 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 S+ I D+ DQ T+ + + ++ +Y S Y A+ + R+QLA KE+++G Sbjct: 145 AASHYDQIPDISRDQGRTEKAIASLEEVIRKYPTSEYANSAKQKLEGARDQLAGKEMDVG 204 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 RYY+ + +Y AAI RF+ V+ Y H EEA+ARL EAY+A+ ++ EA+ +++ + Sbjct: 205 RYYMSKRDYAAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNF 264 Query: 258 PQGYWARYVETLVK 271 P W + TLVK Sbjct: 265 PDSKWYKDAYTLVK 278 >gi|297717818|gb|ADI50052.1| DNA uptake lipoprotein [Candidatus Odyssella thessalonicensis L13] Length = 278 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 68/228 (29%), Positives = 123/228 (53%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S + ++Y A + +++ A + F + R P++ + K+ LMSA+ Sbjct: 19 SCSEKDEEALAQMPVEQLYNMAKDQMDSGSYNTAAKTFAEVERQHPYSEWSLKAQLMSAY 78 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y A KY +A +I +P +++ Y YY+VG+SY + I V DQ T+ + Sbjct: 79 CYYEAKKYTEAIEGYNVFIQLHPGHEHIPYAYYMVGLSYYEQIPTVHRDQTVTEKAQEAF 138 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 ++ R+ +SPY K A+F + + R+ LA KE+++GRYYL++ Y+AA+ RF+ V+ + Sbjct: 139 QEVINRFPDSPYAKDAKFKMDLLRDHLAGKEMDVGRYYLRQRSYLAAVNRFKEVVDRFQT 198 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 H EA+ R+VE Y+AL L+++A + +++ +P W L+ Sbjct: 199 TSHVPEALHRMVECYLALGLVEQAYQTAAILGHNFPGSLWYADTYALM 246 >gi|239832301|ref|ZP_04680630.1| outer membrane assembly lipoprotein YfiO [Ochrobactrum intermedium LMG 3301] gi|239824568|gb|EEQ96136.1| outer membrane assembly lipoprotein YfiO [Ochrobactrum intermedium LMG 3301] Length = 287 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 90/253 (35%), Positives = 137/253 (54%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K AL + L G + V + ++Y + + L +A + Sbjct: 9 VTKTALLTGAIAVLIPLAGCASKDDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAK 68 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F R P+ ARKSL+M+AF Y G Y++A S+ + Y T YP S Y YY++G Sbjct: 69 KFAAVDRQHPYTEWARKSLVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIG 128 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY + I DV DQ A++ + M +V+R+ +S Y A+ + R+QLA KE+++GR Sbjct: 129 LSYFRQIPDVTRDQAASRRAIAAMQEVVDRFPDSEYTDDAKAKIRFARDQLAGKEMQVGR 188 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYL+R EY+AAI RF+ V+ YS+ EEA+ARLVEAY AL L EA+ S++ + YP Sbjct: 189 YYLERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNYP 248 Query: 259 QGYWARYVETLVK 271 W + L++ Sbjct: 249 DSQWYKDSYKLLQ 261 >gi|182677692|ref|YP_001831838.1| DNA uptake lipoprotein-like protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182633575|gb|ACB94349.1| DNA uptake lipoprotein-like protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 391 Score = 287 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 81/259 (31%), Positives = 135/259 (52%), Gaps = 9/259 (3%) Query: 22 FALTIFFSIAVCFLVGWERQSSR---------DVYLDSVTDVRYQREVYEKAVLFLKEQN 72 F L++ +A C +G S + Y V ++Y + ++ L++++ Sbjct: 22 FLLSVSLPLAACSSMGDFDASKSLNPTNWFKGEKYEAKVIPDVPADDIYNQGLVRLQKKD 81 Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 + A + F + +P++ +K LLMSA+ QY G Y A + + Y T YP + + Y Sbjct: 82 YEAAGKKFADLEKQYPYSQWQKKGLLMSAYSQYQNGSYDDAIASAQRYYTLYPNAPDTPY 141 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 YYL MS I DV DQ + +I E++ S Y + A++ + V R+QLA K Sbjct: 142 AYYLAAMSNYNQIPDVSRDQERAQKAAVLFQQIAEKFPKSEYGEDAKYKLQVCRDQLAGK 201 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E+ +GRYYL Y+AA+ RF+ VLA Y H+EEA+ RL EAY+AL +++EA+ ++ Sbjct: 202 EMFVGRYYLNNHNYIAAVNRFREVLAKYQTTRHSEEALMRLTEAYLALGIVNEAQTAAAV 261 Query: 253 IQERYPQGYWARYVETLVK 271 + +P W + L++ Sbjct: 262 LGHNFPDSQWYKDSYALLQ 280 >gi|39936582|ref|NP_948858.1| putative lipoprotein [Rhodopseudomonas palustris CGA009] gi|39650438|emb|CAE28961.1| Protein of unknown function UPF0169 [Rhodopseudomonas palustris CGA009] Length = 302 Score = 287 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 75/250 (30%), Positives = 125/250 (50%), Gaps = 4/250 (1%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL-KEQNFSKAYEYFN 81 L + + C + + D ++Y + + + ++++ A + F Sbjct: 32 LLALSLPLGGCGTGALW---DKFLAKDDKMVDEPADKLYNEGLYLMNQDKDTKGAAKKFE 88 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + R P++ ARKSLLMSA+ Y AG Y Y+T +P S + Y YL+ S Sbjct: 89 EVDRQHPYSDWARKSLLMSAYAYYQAGDYDSCIGSATRYVTLHPGSPDAAYAQYLIAASN 148 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 I D+ DQ T+ + + ++ +Y S Y A+ + R+QLA KE++IGRYY+ Sbjct: 149 YDQIPDISRDQGRTEKAIAALEEVIRKYPTSEYANSAKQKLEGARDQLAGKEMDIGRYYM 208 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + +Y AAI RF+ V+ Y H EEA+ARL EAY+A+ ++ EA+ +++ +P Sbjct: 209 SKRDYAAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPDSR 268 Query: 262 WARYVETLVK 271 W + LVK Sbjct: 269 WYKDAYNLVK 278 >gi|192292404|ref|YP_001993009.1| outer membrane assembly lipoprotein YfiO [Rhodopseudomonas palustris TIE-1] gi|192286153|gb|ACF02534.1| outer membrane assembly lipoprotein YfiO [Rhodopseudomonas palustris TIE-1] Length = 302 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 75/250 (30%), Positives = 125/250 (50%), Gaps = 4/250 (1%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL-KEQNFSKAYEYFN 81 L + + C + + D ++Y + + + ++++ A + F Sbjct: 32 LLALSLPLGGCGTGALW---DKFLAKDDKMVDEPADKLYNEGLYLMNQDKDTKGAAKKFE 88 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + R P++ ARKSLLMSA+ Y AG Y Y+T +P S + Y YL+ S Sbjct: 89 EVDRQHPYSDWARKSLLMSAYAYYQAGDYDSCIGSATRYVTLHPGSPDAAYAQYLIAASN 148 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 I D+ DQ T+ + + ++ +Y S Y A+ + R+QLA KE++IGRYY+ Sbjct: 149 YDQIPDISRDQGRTEKAIAALEEVIRKYPTSEYANSAKQKLEGARDQLAGKEMDIGRYYM 208 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + +Y AAI RF+ V+ Y H EEA+ARL EAY+A+ ++ EA+ +++ +P Sbjct: 209 SKRDYAAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPDSR 268 Query: 262 WARYVETLVK 271 W + LVK Sbjct: 269 WYKDAYNLVK 278 >gi|91977850|ref|YP_570509.1| putative lipoprotein [Rhodopseudomonas palustris BisB5] gi|91684306|gb|ABE40608.1| putative lipoprotein [Rhodopseudomonas palustris BisB5] Length = 301 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 77/256 (30%), Positives = 128/256 (50%), Gaps = 4/256 (1%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDV---RYQREVYEKAVLFLKE-QNFSK 75 L ++ L G + D +L D ++Y + + + + ++ Sbjct: 22 RSLPLMASLAMLALPLGGCGTGAIWDKFLAKDEDKFNDEPADKLYNEGLYLMNKEKDLKA 81 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + F + R P++ ARKSLLMSA+ Y AG Y Y+T +P S + Y Y Sbjct: 82 ASKKFEEVDRQHPYSDWARKSLLMSAYSFYQAGDYDSCIGSATRYVTLHPGSPDAAYAQY 141 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 L+ S+ I DV DQ T+ + + ++ +Y S Y A+ + R+QLA KE++ Sbjct: 142 LIAASHYDQIPDVSRDQGRTEKAIAALEEVIRKYPTSEYANQAKQKLEGARDQLAGKEMD 201 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 +GRYY+++ +Y AAI RF+ V+ Y H EEA+ARL EAY+ + ++ EA+ +++ Sbjct: 202 VGRYYMQKRDYTAAINRFKTVVTRYQTTRHVEEALARLTEAYMTIGIVGEAQTAAAVLGH 261 Query: 256 RYPQGYWARYVETLVK 271 +P W + LVK Sbjct: 262 NFPDSRWYKDAYNLVK 277 >gi|154252872|ref|YP_001413696.1| DNA uptake lipoprotein [Parvibaculum lavamentivorans DS-1] gi|154156822|gb|ABS64039.1| DNA uptake lipoprotein [Parvibaculum lavamentivorans DS-1] Length = 291 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 77/224 (34%), Positives = 128/224 (57%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 + + R ++Y KA+ + ++ A + F++ R P++ AR+S+LMSA+ Y Sbjct: 45 DDELPYEERPVEQIYNKAMDHMAAGDYIPAAKEFDEVERQHPYSEWARRSMLMSAYAHYK 104 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 +Y +A + +I+ +P +K+V Y YYL+G+SY + I DV DQ+ T+ L + Sbjct: 105 INEYDEAILSAQRFISLHPSNKDVPYAYYLIGLSYYERISDVGRDQKMTENALNSFYELT 164 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 +R+ +S Y + AR + + + LA KE+EIGRYYL R +YVAAI RF++V+ Y H Sbjct: 165 QRFPSSEYSRDARLKIDLTLDHLAGKEMEIGRYYLIRRDYVAAINRFRVVIEKYQTTTHT 224 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 EA+ RL EAY+AL + EA+ +++ YP W ++ Sbjct: 225 PEALERLTEAYLALGVKTEAQTAAAILGYNYPGSDWYEDSYAML 268 >gi|146342490|ref|YP_001207538.1| TPR repeat-containing protein [Bradyrhizobium sp. ORS278] gi|146195296|emb|CAL79321.1| Conserved hypothetical protein; Putative Lipoprotein with tetratricopeptide repeat (TPR) domain [Bradyrhizobium sp. ORS278] Length = 297 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 79/250 (31%), Positives = 131/250 (52%), Gaps = 8/250 (3%) Query: 25 TIFFSIAVCFLVGWERQ--SSRDVYLDSVTDVRYQREVYEKAVLFLK-EQNFSKAYEYFN 81 + F +A C G + + D ++D D ++Y + + L +++ A + F Sbjct: 29 LLAFPLAGCGTGGLWDKFLAKDDTFVDEPAD-----KLYNEGLYMLNEKKDMKGANKKFE 83 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + R P++ ARKSLLMSA+ Y AG Y Y+T +P S + Y YL+ S+ Sbjct: 84 EVDRQHPYSDWARKSLLMSAYASYQAGDYDGCIGSATRYVTLHPGSPDAAYAQYLIAASH 143 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 I D+ DQ T+ + + +V +Y NS Y A+ + R+QLA KE+++GRYY+ Sbjct: 144 YDQIPDISRDQGRTEKAIAALEEVVRKYPNSEYATNAKAKMEGARDQLAGKEMDVGRYYM 203 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 ++ +Y AAI RF+ V+ Y H EEA+ RL EAY+ + ++ EA+ +++ +P Sbjct: 204 QKRDYTAAINRFKTVVTQYQTTRHVEEALFRLTEAYMTIGIVGEAQTAAAVLGHNFPDSK 263 Query: 262 WARYVETLVK 271 W + LVK Sbjct: 264 WYKDAYNLVK 273 >gi|153009082|ref|YP_001370297.1| competence protein ComL [Ochrobactrum anthropi ATCC 49188] gi|151560970|gb|ABS14468.1| ComL, hypothetical competence protein [Ochrobactrum anthropi ATCC 49188] Length = 287 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 90/253 (35%), Positives = 136/253 (53%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K AL + L G + V + + Y + + L +A + Sbjct: 9 VTKTALLTGAIAVLIPLAGCASKDDDIDLTKYVETIDPADKTYNEGLANLDAGRLDEAAK 68 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F R P+ ARKSL+M+AF Y G Y++A S+ + Y T YP S Y YY++G Sbjct: 69 KFAAVDRQHPYTEWARKSLVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIG 128 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY + I DV DQ A++ + M +V+R+ +S Y AR + R+QLA KE+++GR Sbjct: 129 LSYFRQIPDVTRDQAASRRAIAAMQEVVDRFPDSEYTDDARAKIRFARDQLAGKEMQVGR 188 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYL+R EY+A+I RF+ V+ YS+ EEA+ARLVEAY AL L EA+ S++ + YP Sbjct: 189 YYLERKEYLASIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNYP 248 Query: 259 QGYWARYVETLVK 271 W + L++ Sbjct: 249 DSQWYKDSYKLLQ 261 >gi|119897308|ref|YP_932521.1| competence lipoprotein [Azoarcus sp. BH72] gi|119669721|emb|CAL93634.1| probable competence lipoprotein precursor [Azoarcus sp. BH72] Length = 269 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 14/247 (5%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 F I L T +++Y +A + E + +A + F + Sbjct: 13 FALIGALLLGACSSLPDEIDE----TSGWNAQKLYAEAKASMTEGGYDRAIKLFEKLEAR 68 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 +P+ A+++ + A+ Y +G+ A + + +I +P NVDYVYYL G+ Sbjct: 69 YPYGRFAQQAQIEVAYAHYKSGEPGLALAAADRFIKLHPNHPNVDYVYYLKGLVNFNEDL 128 Query: 147 DV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 + D + + +V R+ S Y + +R + N LAA +V + Sbjct: 129 GLLAGISNQDLSERDPKGAREAFDTFRELVTRFPESKYAEDSRQRMQYLVNSLAAHDVHV 188 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 RYY +RG ++AA R Q +A Y EEA+ +V++Y AL L D + ++Q+ Sbjct: 189 ARYYYRRGAFIAAANRAQTAVATYPGTPATEEALYLMVKSYEALGLKDLQGDAERVLQKN 248 Query: 257 YPQGYWA 263 +P + Sbjct: 249 FPNSVYY 255 >gi|163794453|ref|ZP_02188424.1| DNA uptake lipoprotein [alpha proteobacterium BAL199] gi|159180177|gb|EDP64700.1| DNA uptake lipoprotein [alpha proteobacterium BAL199] Length = 286 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 77/224 (34%), Positives = 122/224 (54%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 ++ R ++Y +A + F KA F++ R P++ A ++ LM+A+ Y Sbjct: 39 TDDETPYVDRPVEQIYNEAYEAALKGEFKKAAPLFDEVERQHPYSIWATQAQLMAAYSLY 98 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 A KY ++ + + +I P + NVDY YYL G+ Y + I DV DQ+ TK L+ + Sbjct: 99 QANKYTESVNALDRFIQLNPSNPNVDYAYYLKGLCYYEQIVDVGRDQKLTKQALESFDEV 158 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 ++R+ S + + AR + + RN LA KE+ IGR+YL+RG+++AAI RFQ V+ + + Sbjct: 159 IKRFPTSKFARDARLKIDLTRNHLAGKEMAIGRWYLERGQHLAAINRFQKVVEQFDTTDQ 218 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 EA+ RL EAY AL L EA+ S++ YP W L Sbjct: 219 VPEALLRLTEAYTALGLTGEAKRTASVLGYNYPGTEWYEDAYAL 262 >gi|90418186|ref|ZP_01226098.1| putative competence lipoprotein comL [Aurantimonas manganoxydans SI85-9A1] gi|90337858|gb|EAS51509.1| putative competence lipoprotein comL [Aurantimonas manganoxydans SI85-9A1] Length = 293 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 88/255 (34%), Positives = 137/255 (53%), Gaps = 1/255 (0%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVY-LDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 ++ K + +A L G + DV L + +Y + + L+ +A Sbjct: 14 RVAKLTGALALGLASAGLSGCMSSDTSDVEALALAAETDPPDVLYNQGLANLEGGRLGEA 73 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + F R P++ ARK+L+MSAF Y G Y A + + Y++ YP S+ Y Y+ Sbjct: 74 TKKFEAIDRQHPYSEWARKALVMSAFASYRGGDYDTAINSSKRYLSLYPGSEEAAYAQYI 133 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 +G++Y + I DV DQ+ M + E+Y +S Y AR + + R+QLA KE+++ Sbjct: 134 MGLAYYRQIPDVTRDQKEAARAAAAMREVFEKYPDSEYADDARAKLRIARDQLAGKEMQV 193 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 GRYYL+R EYVAAI RF+ V+ YSD+ H EEA+ARL EAY A+ L EA+ S++ + Sbjct: 194 GRYYLERREYVAAINRFKNVVDVYSDSRHVEEALARLTEAYYAMGLTREAQAAASVLGQN 253 Query: 257 YPQGYWARYVETLVK 271 +P W R L++ Sbjct: 254 FPDSQWYRDSYQLLQ 268 >gi|90424787|ref|YP_533157.1| putative lipoprotein [Rhodopseudomonas palustris BisB18] gi|90106801|gb|ABD88838.1| putative lipoprotein [Rhodopseudomonas palustris BisB18] Length = 289 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 73/250 (29%), Positives = 125/250 (50%), Gaps = 4/250 (1%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAYEYFN 81 + + ++ C + + D ++Y + + + + + A + F Sbjct: 19 LIVLTLPLSGCGTGALW---DKFMTKDETYTDEPADKLYNEGLYLMNKGKDPKAASKKFE 75 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + R P++ ARKSLLMSA+ Y AG Y Y+T +P S + Y YL+ S+ Sbjct: 76 EVDRQHPYSDWARKSLLMSAYAFYEAGDYDSCIGSATRYVTMHPGSPDAAYAQYLIAASH 135 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 I D+ DQ T+ + + ++ +Y S Y A+ + R+QLA KE+ +GRYY+ Sbjct: 136 YDQIPDISRDQGRTEKAIAALEEVIRKYPTSEYATSAKKKLEGARDQLAGKEMNVGRYYM 195 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 ++ +Y AAI RF+ V+ Y H EEA+ARL EAY+A+ ++ EA+ +++ +P Sbjct: 196 EKRDYTAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPDSK 255 Query: 262 WARYVETLVK 271 W + LVK Sbjct: 256 WYQDAYNLVK 265 >gi|296532811|ref|ZP_06895488.1| lipoprotein [Roseomonas cervicalis ATCC 49957] gi|296266872|gb|EFH12820.1| lipoprotein [Roseomonas cervicalis ATCC 49957] Length = 281 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 76/250 (30%), Positives = 131/250 (52%), Gaps = 1/250 (0%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + +L + + V W+ + S SV D + +Y + L+++ + +A E F Sbjct: 10 RLSLILAAPLLVGACSAWDGKDSSLRPRASVAD-QSPEALYAAGIEALRQERYQQAVEMF 68 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + + P++ A + LMSA+ +Y +Y +A + +I +P +++ Y YYL + Sbjct: 69 DAVESNHPYSTWATSAKLMSAYSEYMRNRYTEAIGALDRFIQLHPAHRDIAYAYYLRALC 128 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 Y + I D DQR T+ L + +V R+ +S Y + AR + + R+ LA +E+ +GR+Y Sbjct: 129 YYEQIVDAERDQRGTETALAQLQDVVNRFPDSAYARDARLKMDLARDHLAGREMIVGRFY 188 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 RG Y AAI RF+ V+ +Y H EA+ RL E Y+AL L +EAR+ S++ YP Sbjct: 189 QARGLYTAAIGRFKRVVEDYQTTNHVPEALHRLTEVYLALGLTEEARQTASVLGHNYPGS 248 Query: 261 YWARYVETLV 270 W + L+ Sbjct: 249 PWYQDSYALL 258 >gi|209884392|ref|YP_002288249.1| coml, competence lipoprotein [Oligotropha carboxidovorans OM5] gi|209872588|gb|ACI92384.1| coml, competence lipoprotein [Oligotropha carboxidovorans OM5] Length = 281 Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 78/251 (31%), Positives = 130/251 (51%), Gaps = 1/251 (0%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK-EQNFSKAYEYF 80 AL + A G + D + ++Y + + L +++ A + F Sbjct: 7 LALGVITLAAPLGGCGTGNLWDKFFAKDETFVDQPADKLYNEGLYLLNEKKDRKGALKKF 66 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + R P++ ARKSLLMSA+ Y +G Y + + YI+ +P S + Y YLV +S Sbjct: 67 EEVDRQHPYSDWARKSLLMSAYAAYESGDYDECIASANRYISLHPGSPDAAYAQYLVAVS 126 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 + I DV DQ T+ + + +V +Y NS Y A+ + R+QLA +E+ IGRYY Sbjct: 127 HYDQIPDVSRDQTRTEKAIASLEEVVRKYPNSEYATTAKKKIEGARDQLAGREMTIGRYY 186 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 +++ +Y AI RF++V+ Y H EEA+ARL EAY+A+ ++ EA+ +++ +P Sbjct: 187 MEKRDYTGAINRFKVVVTQYQTTRHVEEALARLTEAYMAIGVVSEAQTAAAVLGHNFPDS 246 Query: 261 YWARYVETLVK 271 W + LV+ Sbjct: 247 RWYKDAYNLVR 257 >gi|94497005|ref|ZP_01303579.1| DNA uptake lipoprotein [Sphingomonas sp. SKA58] gi|94423681|gb|EAT08708.1| DNA uptake lipoprotein [Sphingomonas sp. SKA58] Length = 266 Score = 284 bits (727), Expect = 9e-75, Method: Composition-based stats. Identities = 75/249 (30%), Positives = 126/249 (50%), Gaps = 3/249 (1%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A T IA L G ++ L DV +Y L + A F++ Sbjct: 15 AATALVLIASPVLTGCSTSKNKADTLYVARDVST---LYNSGKDRLDRGQYKLAAALFDE 71 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 R P++ AR++ LMSAF Y Y ++ S + +++ + +K+ Y YYL+ + Y Sbjct: 72 VERQHPYSPWARRAQLMSAFSYYMNRDYAESISAAQRFLSIHTGNKDAPYAYYLIAICYY 131 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + I DV DQ+ T+ L + ++ RY + Y AR V + + LA KE+E+GR+Y + Sbjct: 132 EQIADVTRDQKITQQALDSLGELIRRYPQTRYAADARLKVDLVNDHLAGKEMEVGRFYQR 191 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 RG+++AA RF+ V+ Y H EA+ RLVE+Y++L + EA++ +++ YP W Sbjct: 192 RGQWLAATLRFRTVIDKYQTTTHTPEALERLVESYLSLGIPAEAQKAAAVLGRNYPGTKW 251 Query: 263 ARYVETLVK 271 L++ Sbjct: 252 YERSYKLMQ 260 >gi|13471541|ref|NP_103107.1| hypothetical protein mll1543 [Mesorhizobium loti MAFF303099] gi|18202649|sp|Q98KC1|Y1543_RHILO RecName: Full=UPF0169 lipoprotein Mll1543; Flags: Precursor gi|14022283|dbj|BAB48893.1| mll1543 [Mesorhizobium loti MAFF303099] Length = 289 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 83/252 (32%), Positives = 130/252 (51%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 L + + FL V +Y + + L +A + Sbjct: 14 RSVLLALSLVVPSLFLSACMSSEKDIDLSKYVDQTEPADVLYNQGLANLNAGRLDEASKK 73 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F+ R P++ ARKS++M AF Y G Y +A S + Y+ YP + + Y Y++G+ Sbjct: 74 FDAVDRQHPYSEWARKSMVMGAFADYRKGSYDEAISSAKRYLALYPSTDDAPYAQYIIGL 133 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 SY + I+DV DQ+ + LQ M +V R+ S YV A+ + +QLA KE++IGRY Sbjct: 134 SYYRQIKDVTQDQKEARQTLQTMQDLVTRWPTSEYVDDAKEKIRFANDQLAGKEMQIGRY 193 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YL+R EY+AA+ RF+ V+ NYS+ H EEA+ARL E+Y A+ L EA+ +++ YP Sbjct: 194 YLERREYIAAVKRFRTVVENYSNTRHVEEALARLTESYYAMGLTSEAQTAAAVLGTNYPD 253 Query: 260 GYWARYVETLVK 271 W + L++ Sbjct: 254 SPWYKDSYKLLQ 265 >gi|295688858|ref|YP_003592551.1| outer membrane assembly lipoprotein YfiO [Caulobacter segnis ATCC 21756] gi|295430761|gb|ADG09933.1| outer membrane assembly lipoprotein YfiO [Caulobacter segnis ATCC 21756] Length = 315 Score = 283 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 83/250 (33%), Positives = 130/250 (52%), Gaps = 3/250 (1%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + A+TI + + G +S + + R +Y L N+++A +YF Sbjct: 17 RSAVTIAAVLVAVSVAGCAGKSKK---PSLAYEERPVELLYSTGADRLDRGNWNEAVDYF 73 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + R P++ +R+S+LM+ + Y Y A + +I+ YP + + Y YYL + Sbjct: 74 REVERQHPYSEWSRRSILMTGYAHYMGNNYNDAIGDADRFISLYPGNPSASYAYYLKAVC 133 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 Y + I DV DQ AT+ L + +V+RY NS Y AR + + +QLA KE+ IGRYY Sbjct: 134 YFEQIVDVNRDQAATEQALAALRDVVQRYPNSEYATDARLKIDMVNDQLAGKEMAIGRYY 193 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 LK G+ +AAI RF+ VL + H EA+ RLVEAY+ L LMDEA+ +++ +P Sbjct: 194 LKNGQTLAAIGRFKAVLERHQTTSHTPEALYRLVEAYLTLGLMDEAKRNGAVLGYNFPGD 253 Query: 261 YWARYVETLV 270 W L+ Sbjct: 254 RWYADAYRLL 263 >gi|329115585|ref|ZP_08244307.1| UPF0169 lipoprotein [Acetobacter pomorum DM001] gi|326695013|gb|EGE46732.1| UPF0169 lipoprotein [Acetobacter pomorum DM001] Length = 345 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 8/262 (3%) Query: 9 ICIFEAWAYQLYKFALTIFF--SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66 ICI + L++ S+A C L + + L + +Y + Sbjct: 4 ICIKPQLLRHVLPHVLSVALLTSLAGCGLF------NENKKLPPAPKIAAPETLYNNGID 57 Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 L+ + ++ A F +++P++G + LM + Y GKY +A +I+ +P Sbjct: 58 ALRTRRYALAASEFETLQQNYPYSGYIANAQLMEGYAYYLKGKYPEAVQQLNRFISLHPT 117 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 S + Y YYL + + + I DV DQ+ T + + ++ R+ S Y + A+ + + R Sbjct: 118 SSDSAYAYYLRALCFYEQIADVQRDQQGTAESMDALEEVITRFPQSKYARDAQLKIDLCR 177 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 + LA KE+ +GRYY + Y AI R+Q V+ ++ H EA+ R+VE Y+ L L D+A Sbjct: 178 DHLAGKEMLVGRYYQREKNYEGAINRYQRVVQDFQTTNHVPEALERMVEVYLDLGLTDQA 237 Query: 247 REVVSLIQERYPQGYWARYVET 268 R+ ++ YP W RY Sbjct: 238 RKSAIVLGYNYPGSKWYRYAYD 259 >gi|258542978|ref|YP_003188411.1| hypothetical protein APA01_19070 [Acetobacter pasteurianus IFO 3283-01] gi|256634056|dbj|BAI00032.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01] gi|256637116|dbj|BAI03085.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03] gi|256640168|dbj|BAI06130.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07] gi|256643225|dbj|BAI09180.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22] gi|256646280|dbj|BAI12228.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26] gi|256649333|dbj|BAI15274.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32] gi|256652319|dbj|BAI18253.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655377|dbj|BAI21304.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12] Length = 345 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 8/262 (3%) Query: 9 ICIFEAWAYQLYKFALTIFF--SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66 ICI + L++ S+A C L + + L + +Y + Sbjct: 4 ICIKPQLLRHVLPRVLSVALLTSLAGCGLF------NENKKLPPAPKIAAPETLYNNGID 57 Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 L+ + ++ A F +++P++G + LM + Y GKY +A +I+ +P Sbjct: 58 ALRTRRYALAASEFETLQQNYPYSGYIANAQLMEGYAYYLKGKYPEAVQQLNRFISLHPT 117 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 S + Y YYL + + + I DV DQ+ T + + ++ R+ S Y + A+ + + R Sbjct: 118 SSDSAYAYYLRALCFYEQIADVQRDQQGTAESMDALEEVITRFPQSKYARDAQLKIDLCR 177 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 + LA KE+ +GRYY + Y AI R+Q V+ ++ H EA+ R+VE Y+ L L D+A Sbjct: 178 DHLAGKEMLVGRYYQREKNYEGAINRYQRVVQDFQTTNHVPEALERMVEVYLDLGLTDQA 237 Query: 247 REVVSLIQERYPQGYWARYVET 268 R+ ++ YP W RY Sbjct: 238 RKSAIVLGYNYPGSKWYRYAYD 259 >gi|319782856|ref|YP_004142332.1| outer membrane assembly lipoprotein YfiO [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168744|gb|ADV12282.1| outer membrane assembly lipoprotein YfiO [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 289 Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 82/248 (33%), Positives = 129/248 (52%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + + FL V +Y + + L +A F+ Sbjct: 18 LALSVVVPSLFLSACMSSEKDIDLSTYVDQTEPADVLYNQGLANLNAGRLQEASRKFDAV 77 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 R P++ ARKS++M AF Y G Y +A + Y+T YP + + Y Y++G+SY + Sbjct: 78 DRQHPYSEWARKSMVMGAFADYRQGNYDEAIGSAKRYLTLYPSTDDAAYAQYIIGLSYYR 137 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 I+DV DQ+ + +Q M +V R+ S YV A+ + +QLA KE++IGRYYL+R Sbjct: 138 QIKDVTQDQKEARQTVQTMQDLVTRWPTSEYVDDAKEKIRFANDQLAGKEMQIGRYYLER 197 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 EY+AA+ RF+ V+ NYS+ H EEA+ARL E+Y A+ L EA+ +++ YP W Sbjct: 198 REYIAAVKRFRTVVENYSNTRHVEEALARLTESYYAMGLTSEAQTAAAVLGTNYPDSSWY 257 Query: 264 RYVETLVK 271 + L++ Sbjct: 258 KDSYKLLQ 265 >gi|114570618|ref|YP_757298.1| DNA uptake lipoprotein-like protein [Maricaulis maris MCS10] gi|114341080|gb|ABI66360.1| DNA uptake lipoprotein-like protein [Maricaulis maris MCS10] Length = 276 Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 80/252 (31%), Positives = 133/252 (52%), Gaps = 4/252 (1%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + L V R +Y A L Q + A Sbjct: 1 MTFMSRIVAPLVLSALLASCASGPDNSVAYVE----RPAETIYATAFESLDRQQYPLAAA 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F++ R P++ AR+++LM+A+ Y + Y +A S + +I+ +P ++N Y YYL+ Sbjct: 57 RFDEVERQHPYSEWARRAMLMAAYANYESNNYDEAISDAQRFISLHPGNRNAAYAYYLIA 116 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +S+ + I DV DQ AT+ L + ++V R+ +S Y AR + + R+ LA KE+ +GR Sbjct: 117 ISHFEQIMDVGRDQAATQQALLSLEQVVRRFPDSRYATDARLKIDMTRDHLAGKEMSVGR 176 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 +YL+RG ++AAI RFQ VL Y + H EA+ RLVE+YV+L + +EAR+V S++ +P Sbjct: 177 WYLRRGYHLAAINRFQNVLREYGNTSHVPEALHRLVESYVSLGIDEEARQVASVLGYNFP 236 Query: 259 QGYWARYVETLV 270 W L+ Sbjct: 237 GSDWYETSYDLL 248 >gi|27381705|ref|NP_773234.1| hypothetical protein bll6594 [Bradyrhizobium japonicum USDA 110] gi|27354874|dbj|BAC51859.1| bll6594 [Bradyrhizobium japonicum USDA 110] Length = 296 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 71/249 (28%), Positives = 123/249 (49%), Gaps = 4/249 (1%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK-EQNFSKAYEYFNQ 82 + + +A C + D ++Y + + + +++ A + F + Sbjct: 27 IMLALPLAGCGTGALW---DKFTAKDDTFVEEPADKIYNEGLYLMNEKKDMKAANKKFEE 83 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 R P++ ARKSLLMSA+ Y G Y Y+T +P S + Y YL+ S+ Sbjct: 84 VDRQHPYSDWARKSLLMSAYASYQGGDYDGCIGAATRYVTLHPGSPDAAYAQYLIAASHY 143 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 I D+ DQ T+ + + ++ +Y S Y A+ + R+QLA KE+ +GRYY++ Sbjct: 144 DQIPDISRDQSRTEKAIASLEEVIRKYPTSEYATSAKAKIEGARDQLAGKEMNVGRYYMQ 203 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + +Y AAI R++ V+ Y H EEA+ RL EAY+A+ ++ EA+ +++ +P W Sbjct: 204 KRDYTAAINRYKAVVTQYQTTRHVEEALYRLTEAYMAIGIVGEAQTAAAVLGHNFPDSRW 263 Query: 263 ARYVETLVK 271 + LVK Sbjct: 264 YKDAYNLVK 272 >gi|323137883|ref|ZP_08072958.1| outer membrane assembly lipoprotein YfiO [Methylocystis sp. ATCC 49242] gi|322396886|gb|EFX99412.1| outer membrane assembly lipoprotein YfiO [Methylocystis sp. ATCC 49242] Length = 302 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 132/242 (54%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 + G+ + Y + ++Y + + LK++++ A + F + +P Sbjct: 37 LLDSVTSGFGLFGGGEKYKTEILPDIPADDLYNQGLAKLKKKDYEGAAKKFGDLEKQYPS 96 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + +RK+LLM+ F Q+ G Y ++ + YI YP S + YVYYL GMS+ + DV Sbjct: 97 SEWSRKALLMTTFAQFQKGAYDESVQSAQRYIGLYPNSADTPYVYYLAGMSFYNQVPDVM 156 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 DQ+ + L+ ++++++Y S YV AR+ + V R+QLAAKE+ +GR+YL R Y AA Sbjct: 157 RDQQPAEKALEVFTQLIQKYPKSEYVTDARYKIQVTRDQLAAKEMNVGRFYLTRKNYPAA 216 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 I RF VL Y H EEA+ RL EAY+A+ + +EA+ +++ +P W + L Sbjct: 217 INRFHDVLGKYQTTRHTEEALYRLTEAYMAMGVTNEAQTAAAILGHNFPDSQWYKDAHAL 276 Query: 270 VK 271 +K Sbjct: 277 LK 278 >gi|288958800|ref|YP_003449141.1| lipoprotein [Azospirillum sp. B510] gi|288911108|dbj|BAI72597.1| lipoprotein [Azospirillum sp. B510] Length = 271 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 77/254 (30%), Positives = 139/254 (54%), Gaps = 11/254 (4%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y+L A+ + +++ C + D Y++ D ++ +A ++++ F KA Sbjct: 6 YRLPLTAILLSAALSAC------SSTKEDAYVERPAD-----QLLSEADAAMRDEAFKKA 54 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + +++ R P++ A K+ L++A+ Y KY A + +I +P S +VDY YY+ Sbjct: 55 AKLYDEVERQHPYSDSASKAQLLAAYAHYQDLKYDDAILALDRFIQLHPGSPDVDYAYYM 114 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 +SY + I DV DQ+ T+ L + +V R+ +S Y + A+ + + + LA KE+E+ Sbjct: 115 RALSYYEQITDVRRDQKMTRQALDALQEVVRRFPDSKYARDAKLKIDLTNDHLAGKEMEV 174 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 GR+YL++ +Y AAI RF++V+ NY H EA+ RLVE Y+AL + DEA+ +++ Sbjct: 175 GRFYLRQRQYTAAINRFRVVVENYQTTSHVPEALHRLVECYLALGVTDEAKAAAAVLGHN 234 Query: 257 YPQGYWARYVETLV 270 +P W L+ Sbjct: 235 FPGSEWYTDSYALL 248 >gi|148257409|ref|YP_001241994.1| hypothetical protein BBta_6164 [Bradyrhizobium sp. BTAi1] gi|146409582|gb|ABQ38088.1| hypothetical protein BBta_6164 [Bradyrhizobium sp. BTAi1] Length = 297 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 127/243 (52%), Gaps = 8/243 (3%) Query: 32 VCFLVGWERQ--SSRDVYLDSVTDVRYQREVYEKAVLFLK-EQNFSKAYEYFNQCSRDFP 88 C G + + D ++D D ++Y + + + +++ A + F + R P Sbjct: 36 GCGTGGLWDKFLAKDDTFVDEPAD-----KLYNEGLYLMNEKKDVKGATKKFEEVDRQHP 90 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 ++ ARKSLLMSA+ Y AG Y Y+T +P S + Y YL+ S+ I D+ Sbjct: 91 YSDWARKSLLMSAYASYQAGDYDGCIGAATRYVTLHPGSPDAAYAQYLIAASHYDQIPDI 150 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 DQ T+ + + +V +Y NS Y A+ + R+QLA KE+++GRYY+++ +Y A Sbjct: 151 SRDQGRTEKAIAALEEVVRKYPNSEYATNAKAKMEGARDQLAGKEMDVGRYYMQKRDYTA 210 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 AI RF+ V+ Y H EEA+ RL EAY+ + ++ EA+ +++ +P W + Sbjct: 211 AINRFKAVVTQYQTTRHVEEALYRLTEAYMTIGIVGEAQTAAAVLGHNFPDSKWYKDAYN 270 Query: 269 LVK 271 LVK Sbjct: 271 LVK 273 >gi|148554377|ref|YP_001261959.1| DNA uptake lipoprotein-like protein [Sphingomonas wittichii RW1] gi|148499567|gb|ABQ67821.1| DNA uptake lipoprotein-like protein [Sphingomonas wittichii RW1] Length = 261 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 76/253 (30%), Positives = 133/253 (52%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 L K + I IA LV ++ D+ R +Y A L + A Sbjct: 2 LRKVSRPIALMIAAATLVPLAGCATSKNKGDTKYVARDVDTLYNAAKERLDRHQYKLAAA 61 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F++ R P++ AR++ LMSAF Y A +Y ++ + + +I+ +P +++ Y YL+ Sbjct: 62 LFDEVERQHPYSVWARRAQLMSAFSYYLARQYTESIASAQRFISIHPGNRDAPYALYLIA 121 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 + Y + I+DV DQ+ T+ L ++ ++ RY +S Y AR V + + LA KE+EIGR Sbjct: 122 IDYYEQIQDVTRDQKLTQNALDALNELIRRYPDSRYAADARVKVDLVNDHLAGKEMEIGR 181 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 +Y +RG+++A++ RF+ V+ Y H EA+ RL E+Y+ L + EA +++ YP Sbjct: 182 FYQRRGDWLASVVRFRTVVDKYDTTSHTPEALMRLTESYLELGVPQEAERAAAVLGANYP 241 Query: 259 QGYWARYVETLVK 271 W ++ L++ Sbjct: 242 GSKWYQHSYELLR 254 >gi|113867447|ref|YP_725936.1| DNA uptake lipoprotein [Ralstonia eutropha H16] gi|113526223|emb|CAJ92568.1| DNA uptake lipoprotein [Ralstonia eutropha H16] Length = 276 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 12/247 (4%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDV--RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 AV G S+ + D + ++Y +A L ++++A + + + +P Sbjct: 17 AVLLAGGCVMLSACGLLADQPDETAGWSANKLYSEAKDALDGGDYTRAVKLYEKLEGRYP 76 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---- 144 F A+++ + +A+ Y G+ A + + +I +P N+DY YYL G+ Sbjct: 77 FGRYAQQAQIDTAYANYKDGETAAALAAVDRFIQLHPNHPNIDYAYYLKGLINFNDNLGW 136 Query: 145 ------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D +A + + ++ RY S Y A + N LA EV R Sbjct: 137 LGRFSGQDLSERDPKAARAAYDAFNTLITRYPESKYTPDATLRMQYIVNSLAQHEVHAAR 196 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YY +RG Y+AA+ R Q L +Y A EEA+ +V +Y A+ + D + +++ +P Sbjct: 197 YYYRRGAYLAAVNRAQQALKDYDGAPANEEALYIMVRSYDAMGMKDLRDDTARVMERNFP 256 Query: 259 QGYWARY 265 + +Y Sbjct: 257 DSDFIKY 263 >gi|83858907|ref|ZP_00952429.1| competence lipoprotein ComL, putative [Oceanicaulis alexandrii HTCC2633] gi|83853730|gb|EAP91582.1| competence lipoprotein ComL, putative [Oceanicaulis alexandrii HTCC2633] Length = 277 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 78/252 (30%), Positives = 135/252 (53%), Gaps = 4/252 (1%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + L + ++ + +Y +A ++ + + +A Sbjct: 1 MKTVLRVALLGAVALSLTACAGRDREELAYVE----QPVETLYAEAFDKMQRRRYDEAAA 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 YF++ R PF+ AR+S+LM+A+ Y KY +A S + +I +P + + Y YYL+ Sbjct: 57 YFDEVERQHPFSEWARRSMLMAAYANYRQSKYDEAISDAQRFIALHPGNASAPYAYYLIA 116 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY + I DV DQ T+ LQ + ++V RY ++PY + AR + + R+ LA KE+ +GR Sbjct: 117 LSYYERIYDVGRDQSTTQQALQALEQVVRRYPDTPYAQDARLKIDMTRDHLAGKEMSVGR 176 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 +YL+ G ++AAI RFQ V+ +Y H EA+ RLVEAYV+L + +EAR++ +++ +P Sbjct: 177 WYLRNGYHLAAINRFQNVIRDYETTSHTPEALHRLVEAYVSLGVDEEARQIAAVLGYNFP 236 Query: 259 QGYWARYVETLV 270 W L+ Sbjct: 237 GSEWYEDSYDLL 248 >gi|194289463|ref|YP_002005370.1| lipoprotein, coml family, tetratricopeptide repeats (tpr) domain [Cupriavidus taiwanensis LMG 19424] gi|193223298|emb|CAQ69303.1| putative lipoprotein, ComL family, tetratricopeptide repeats (TPR) domain [Cupriavidus taiwanensis LMG 19424] Length = 276 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 58/247 (23%), Positives = 109/247 (44%), Gaps = 12/247 (4%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDV--RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 AV G S+ + D + ++Y +A L ++++A + + + +P Sbjct: 17 AVLLAGGCVMLSACGLLADQPDETAGWSANKLYSEAKDALDGGDYTRAVKLYEKLEGRYP 76 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---- 144 F A+++ + +A+ Y G+ A + + +I +P N+DY YYL G+ Sbjct: 77 FGRYAQQAQIDTAYANYKDGETAAALAAVDRFIQLHPNHPNIDYAYYLKGLINFNDNLGW 136 Query: 145 ------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D +A + ++ RY S Y A + N LA EV R Sbjct: 137 LGRFSGQDLSERDPKAARAAYDAFHTLITRYPESKYTPDATLRMQYIVNSLAQHEVHAAR 196 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YY +RG Y+AA+ R Q L +Y A EEA+ ++ +Y A+ + D + ++++ +P Sbjct: 197 YYFRRGAYLAAVNRAQQSLKDYDGAPANEEALYIMIRSYDAMGMKDLRDDTARVMEKNFP 256 Query: 259 QGYWARY 265 + + +Y Sbjct: 257 ESDFIKY 263 >gi|297182617|gb|ADI18776.1| DNA uptake lipoprotein [uncultured gamma proteobacterium HF4000_36I10] Length = 310 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 54/243 (22%), Positives = 109/243 (44%), Gaps = 17/243 (6%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 + V L ++ ++++Y +A L+ N+S A + Sbjct: 8 LMILLVGVLAACASDPEKEAE-------SSEKQIYNQAQEHLENGNYSLAVKNLQLLESR 60 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 FPF A ++ L + Y + + + A + + +I +P+ +VDY YY+ G++ + Sbjct: 61 FPFGPYAEQAQLEIIYAHYRSLEPEAAIAAADRFIRLHPQHPSVDYAYYMRGLANYTEGQ 120 Query: 147 DV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 + D A + ++++R+ +S Y AR + RN+LA E+ + Sbjct: 121 GLLERFFPTDMSQRDPGAAVQAFEDFRQLLQRFPDSQYAPDARARMIHLRNRLARYEINV 180 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 YY KR Y+AA R + V+ N +A+A +V+AY+ L + D A +++++ Sbjct: 181 ANYYFKRKAYLAAANRGRYVVENMPQTSAVPDALAVMVQAYLLLGMDDLADRSLTVLRSN 240 Query: 257 YPQ 259 +P+ Sbjct: 241 FPK 243 >gi|226941138|ref|YP_002796212.1| ComL [Laribacter hongkongensis HLHK9] gi|226716065|gb|ACO75203.1| ComL [Laribacter hongkongensis HLHK9] Length = 263 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 107/259 (41%), Gaps = 17/259 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K A+ + + +L G S T ++Y +A L N+++A + Sbjct: 1 MKKIAVMMLMA---AWLAGCSTTS----EPADETRGWTVEKLYSEARDELNSGNYTRAIK 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + +P+ A+++ + A+ + + + + + +I +P NVDYVYYL G Sbjct: 54 LYETLEARYPYGRYAQQAQMDLAYAHFKDQEPALSLAAADRFIKLHPAHPNVDYVYYLKG 113 Query: 139 MSYAQMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + D +A + +V R+ +S Y AR + + Sbjct: 114 LVNYNEDGGILSKYTGQDRAERDPKAAREAFTSFRDLVVRFPDSRYAPDARVKMQNLVDG 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + RYY++R Y+AA R Q ++ + D+ EE+ A +V AY L + Sbjct: 174 LAEHELFVARYYMRRSAYLAAANRAQGMIKEFPDSPFVEESFAIMVTAYDKLGKTTLRDD 233 Query: 249 VVSLIQERYPQGYWARYVE 267 +++ +P + + Sbjct: 234 TRRVLETNFPNSVYLKKPW 252 >gi|257095461|ref|YP_003169102.1| outer membrane assembly lipoprotein YfiO [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047985|gb|ACV37173.1| outer membrane assembly lipoprotein YfiO [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 264 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 10/226 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 T ++Y +A L + +++KA +YF + +P+ A+++ + A+ + Sbjct: 26 KDETIGWSANKLYAEAKDALNDGSYAKAIKYFEKLESRYPYGRYAQQAQIEIAYAYWKDQ 85 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158 + A + + +I +P NVDYVYYL G+ + D + + Sbjct: 86 EPASAVAACDRFIKLHPNHPNVDYVYYLRGLINFNEDLGIMGTISNQDMTERDPKGARES 145 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 +V R+ +S Y A + N LA+ E+ + RYY+KRG Y+AA R Q + Sbjct: 146 FDAFRELVTRFPDSKYTPDALLRMKYLVNALASLELHVARYYMKRGAYLAAANRAQYAVK 205 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 NY DA EEA+ +V+AY +L L D + +++ YP + R Sbjct: 206 NYPDAPATEEALFIMVKAYDSLGLNDLRDDAERVMRTNYPNSDYYR 251 >gi|170728052|ref|YP_001762078.1| putative lipoprotein [Shewanella woodyi ATCC 51908] gi|169813399|gb|ACA87983.1| putative lipoprotein [Shewanella woodyi ATCC 51908] Length = 268 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 58/271 (21%), Positives = 99/271 (36%), Gaps = 17/271 (6%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 M L + + K A+ FS+A+ S + T + Sbjct: 1 MKKFLTITLKESNLSMHTFVKGAVIGLFSLAITAC-------SSNQEDQLKTSKSSPDVL 53 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A ++ N+SKA +PF + L + Y + + + Sbjct: 54 YSQARTSMELGNYSKAVRSLEALDSRYPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRF 113 Query: 121 ITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYT 170 I P KN+DYVYY+ G+ Q I D + + + R+++ Y Sbjct: 114 IRLNPTHKNIDYVYYMRGLVNMQSDNYMFHDMLNIDRTDRDPKVAQDAFKDFDRLIKSYP 173 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 NS Y A + +N+LA + + YY+K + AA R Q V+ + E A+ Sbjct: 174 NSKYAPDAAKRMQQLKNRLAKYSINVAEYYIKMNAWSAAATRAQSVMETFPGTPSTERAL 233 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + AY L V+S++Q +P Sbjct: 234 EIMSIAYGELGQAKLKENVLSVMQANFPNNS 264 >gi|197105773|ref|YP_002131150.1| DNA uptake lipoprotein [Phenylobacterium zucineum HLK1] gi|196479193|gb|ACG78721.1| DNA uptake lipoprotein [Phenylobacterium zucineum HLK1] Length = 305 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 118/227 (51%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 V + R +Y L +++A YF + R P++ +R+S+LM A+ Sbjct: 27 NKKKPRLVYEERPVELLYATGANRLDRGLWNQAINYFQEVERQHPYSEWSRRSILMQAYA 86 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y + Y +A + +I YP + Y +Y+ + Y + I DV DQ AT L+ + Sbjct: 87 HYQSNDYPEAIGDADRFIQLYPGNPAAAYAHYIKAICYFEQIVDVGRDQAATGQALEALR 146 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 +V+RY S Y + AR + + +QLA KE+ +GR+YL+ G+ +AA+ RF+ V+ Y Sbjct: 147 AVVQRYPASEYAQDARLKIDMVNDQLAGKEMTVGRWYLRNGDTLAAVNRFKTVVDRYQTT 206 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 H EA+ RLVEAY+ L L +EA+ +++ YP W R L+ Sbjct: 207 THTPEALYRLVEAYLTLGLTEEAKRNGAVLGYNYPGDPWYRDAYRLL 253 >gi|157376632|ref|YP_001475232.1| putative lipoprotein [Shewanella sediminis HAW-EB3] gi|157319006|gb|ABV38104.1| putative lipoprotein [Shewanella sediminis HAW-EB3] Length = 282 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 58/271 (21%), Positives = 99/271 (36%), Gaps = 17/271 (6%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 M L + ++ K A+ FS+A + D+ + + Sbjct: 15 MEKFLTITLKESNLSMHKFAKGAVVGLFSLA---IAACSSSPEEDLKVKK----SSPDIL 67 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A ++ NFSKA +PF + L F Y + + + Sbjct: 68 YSQARTSMELGNFSKAVRSLEALDSRYPFGPHKTQVQLDLIFAYYKLDDAASGIANIDRF 127 Query: 121 ITQYPESKNVDYVYYLVGMSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYT 170 I P K++DYVYY+ G+ Q I D + + R+++ Y Sbjct: 128 IRLNPTHKDIDYVYYMRGLVNMQSDNYMFHDMLDIDRTDRDPKVAQDAFNDFDRLIKSYP 187 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 S Y A + +N+LA + + YY+K + AA R Q V+ Y E A+ Sbjct: 188 KSKYAPDAAKRMLYLKNRLAKYSINVAEYYIKMNAWSAASTRAQSVMETYPGTTSTERAL 247 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + EAY L V+S+++ +P Sbjct: 248 EIMAEAYGELGQEKLRENVLSVMKINFPNNK 278 >gi|144897937|emb|CAM74801.1| competence lipoprotein ComL [Magnetospirillum gryphiswaldense MSR-1] Length = 271 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 130/241 (53%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 +A L+ S R E+Y +A+ +++ + KA F++ R P+ Sbjct: 10 LAGATLIATALLLSACSDKKDEYVERPVEELYNEAMDLVEKGEYYKAALAFDEVDRQHPY 69 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + A K+ LM+A+V Y KY A + +I +P +K+ Y YYL G+ Y + + DV Sbjct: 70 SVWATKAQLMNAYVLYERNKYPDALVALDRFIQLHPGNKDAPYAYYLKGLCYYEQVTDVA 129 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 DQ+ T++ L+ + +V+RY S Y + A+ V + R+ LA KE+ I RYY KR +++AA Sbjct: 130 RDQKMTEMALKSLQEVVDRYPASSYARDAKLKVDLTRDHLAGKEMNIARYYQKRDQWLAA 189 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 + R+++V+ Y H EA+ R+VE Y+ L L +EA++ ++I +P W ++ Sbjct: 190 LNRYKIVVEQYQTTSHVPEALHRMVEIYLTLGLTEEAKKTAAVIGHNFPGSDWYEDTFSM 249 Query: 270 V 270 V Sbjct: 250 V 250 >gi|220927172|ref|YP_002502474.1| outer membrane assembly lipoprotein YfiO [Methylobacterium nodulans ORS 2060] gi|219951779|gb|ACL62171.1| outer membrane assembly lipoprotein YfiO [Methylobacterium nodulans ORS 2060] Length = 299 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 74/252 (29%), Positives = 137/252 (54%), Gaps = 5/252 (1%) Query: 25 TIFFSIAVCFLVGWERQSS-----RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + L G + S + Y + R ++Y + + L++ ++ +A + Sbjct: 17 VALLAACGAGLAGCDALDSINPFGPEKYKPEIIQRRPADKIYSEGLAKLEDHDYDEAVKR 76 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F +++ ++ +RK++LM+A+ Y KY+ A + + Y+ ++P SK+ Y Y++ M Sbjct: 77 FENLDKEYAYSDWSRKAVLMTAYSNYEGQKYEDAITAAKRYLQRHPGSKDAAYAQYILAM 136 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S+ + I DV DQ ++ L + +V++Y S Y A+ + + R+QLA KE+ IGRY Sbjct: 137 SHYKQIPDVTRDQERSERALAALQELVQKYPTSEYAADAKAKIQITRDQLAGKEMAIGRY 196 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YL+R + AAI RF+ V++ Y HAEEA+ RL EAY+AL ++ EA+ +++ +P Sbjct: 197 YLERRNFPAAINRFRDVVSRYQTTRHAEEALERLAEAYMALGIVGEAQTAAAVLGHNFPD 256 Query: 260 GYWARYVETLVK 271 W + L++ Sbjct: 257 SPWYKDAYALLQ 268 >gi|83312955|ref|YP_423219.1| DNA uptake lipoprotein [Magnetospirillum magneticum AMB-1] gi|82947796|dbj|BAE52660.1| DNA uptake lipoprotein [Magnetospirillum magneticum AMB-1] Length = 304 Score = 277 bits (710), Expect = 8e-73, Method: Composition-based stats. Identities = 73/218 (33%), Positives = 119/218 (54%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 R E+Y +A+ + + KA + F++ R P++ A K+ LMSA+ Y KY A Sbjct: 36 ERPVEELYNEAMDLVDANEYYKAAQLFDEVDRQHPYSVWATKAQLMSAYALYERNKYDDA 95 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + +I +P +K++ Y YYL G+ Y + I DV DQ+ T+ L+ M +V+R+ ++P Sbjct: 96 IVALDRFIQLHPGNKSIAYGYYLKGLCYYEQITDVARDQKLTEQALKIMQEVVDRFPSTP 155 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y + AR + + R+ LA KE+ IGRYY ++AA+ RF++V Y H EA+ R+ Sbjct: 156 YARDARLKIDLARDHLAGKEMNIGRYYQHLEHHLAALNRFKVVAEQYQTTTHVPEALYRM 215 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 VE Y AL L EA +++ +P W +V+ Sbjct: 216 VEIYTALGLDQEAARAAAVLGHNFPGSDWYEDAYAMVE 253 >gi|301629104|ref|XP_002943688.1| PREDICTED: hypothetical protein LOC100490343 [Xenopus (Silurana) tropicalis] Length = 475 Score = 277 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 62/256 (24%), Positives = 113/256 (44%), Gaps = 15/256 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + L +F ++ L+ +S D T ++Y +A + + KA Sbjct: 211 MLRAPLPLFSALLAAGLIAGCASTSEDK-----TANWSPDKIYSEAREEMNSGAYDKAVP 265 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + +A+++ L A+ Q+ G+ QA + E ++ +P S +DY YL G Sbjct: 266 LLEKLEGRAAGTPLAQQAQLDKAYAQFKNGEKAQAIATLERFLKLHPASPAIDYALYLRG 325 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + DQ+A K + + R+ +S Y AR +T N Sbjct: 326 LVNFNDNLGIFSWLSRQDLSERDQKAAKDSFESFRDLTTRFPDSRYAPDARQRMTYIVNA 385 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA EV + RYY +RG YVAA+ R Q +++Y + AEEA+ L+ +Y AL + + Sbjct: 386 LAQYEVHVARYYYERGAYVAAVGRAQQAISDYQNVPAAEEALYILIRSYDALGMAQLRDD 445 Query: 249 VVSLIQERYPQGYWAR 264 + ++ YP+ + + Sbjct: 446 TMRVMNASYPESGYVK 461 >gi|56478104|ref|YP_159693.1| putative competence lipoprotein precursor [Aromatoleum aromaticum EbN1] gi|56314147|emb|CAI08792.1| putative competence lipoprotein precursor [Aromatoleum aromaticum EbN1] Length = 265 Score = 277 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 61/255 (23%), Positives = 112/255 (43%), Gaps = 14/255 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + IA L G + T + +Y +A F+ E + +A + Sbjct: 1 MARVTFRSLAVIAALLLGGCGSMPEQIDE----TAGWNAQRLYSEAKTFMNEGAYEQAIK 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F + +P+ A+++ + A+ QY +G+ A + + +I +P N DY YYL G Sbjct: 57 LFEKLEARYPYGRYAQQAQIEVAYAQYKSGEPALAIAAADRFIKLHPNHPNADYAYYLKG 116 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + ++V+R+ S Y + A + N Sbjct: 117 LATFNEDLGLLAGLSNQDLSERDPKGAQESFDTFGQLVKRFPESRYAEDAGQRMQYLVNS 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LAA EV + RYY +RG YVAA+ R + L Y A AEEA+ LV++Y L + + + Sbjct: 177 LAAHEVHVARYYYRRGAYVAAVNRARTALETYPQAPAAEEALFVLVKSYDTLGMTELRDD 236 Query: 249 VVSLIQERYPQGYWA 263 ++++ +P + Sbjct: 237 ADRVMRKNFPNSVYF 251 >gi|167647062|ref|YP_001684725.1| outer membrane assembly lipoprotein YfiO [Caulobacter sp. K31] gi|167349492|gb|ABZ72227.1| outer membrane assembly lipoprotein YfiO [Caulobacter sp. K31] Length = 306 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 80/248 (32%), Positives = 132/248 (53%), Gaps = 2/248 (0%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A T+ ++ V + S+ L + R +Y L ++++A +YF + Sbjct: 10 AATVATAVLVALSISACAGKSKKPTL--AYEERPVELLYSTGANRLDRGSWNEAVDYFRE 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 R P++ +R+S+LM+ + Y +Y +A S + +I YP + + Y YYL + Y Sbjct: 68 VERQHPYSEWSRRSILMTGYAHYMGNQYNEAISDSDRFIGLYPGNPSASYAYYLKAVCYF 127 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + I DV DQ AT+ L + +V+RY NS Y + AR + + +QLA KE+ IGRYYLK Sbjct: 128 EQIVDVNRDQAATEQALAALRDVVQRYPNSEYAQDARLKIDMVNDQLAGKEMTIGRYYLK 187 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 G+ +AAI RF+ V+ + H EA+ RLVE+Y+ L L+DEA+ +++ +P W Sbjct: 188 NGQTLAAIGRFRTVIDRHQTTSHTPEALYRLVESYMTLGLLDEAKRNGAVLGYNFPGDPW 247 Query: 263 ARYVETLV 270 L+ Sbjct: 248 YAEAYKLL 255 >gi|221235000|ref|YP_002517436.1| ComL family lipoprotein [Caulobacter crescentus NA1000] gi|220964172|gb|ACL95528.1| lipoprotein, ComL family [Caulobacter crescentus NA1000] Length = 309 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 76/248 (30%), Positives = 131/248 (52%), Gaps = 3/248 (1%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A+TI + + G ++ + V + R +Y L N+++A +YF + Sbjct: 14 AVTIAAVLVAASVAGCAGKAKK---PTLVYEERPVELLYSTGADRLDRGNWNEAVDYFRE 70 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 R P++ +R+S+LM+ + Y +Y +A + +I+ YP + + Y +YL + Y Sbjct: 71 VERQHPYSEWSRRSILMTGYAHYMGNQYAEAIGDADRFISLYPGNPSAQYAFYLKAICYF 130 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + I DV DQ AT+ L + +V+RY N+ Y AR + + +QLA KE+ IGR+YLK Sbjct: 131 EQIVDVNRDQAATEQALAALRDVVQRYPNTEYATDARLKIDMVNDQLAGKEMAIGRWYLK 190 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 G+ +AAI RF+ V+ + H EA+ RLVEAY+ + L +EA+ +++ +P W Sbjct: 191 NGQTLAAIGRFKAVIERHQTTSHTPEALFRLVEAYLTIGLNEEAKRNGAVLGYNFPGDRW 250 Query: 263 ARYVETLV 270 L+ Sbjct: 251 YVDAYRLL 258 >gi|16126227|ref|NP_420791.1| competence lipoprotein ComL [Caulobacter crescentus CB15] gi|18202701|sp|Q9A6U9|Y1984_CAUCR RecName: Full=UPF0169 lipoprotein CC_1984; Flags: Precursor gi|13423451|gb|AAK23959.1| competence lipoprotein ComL, putative [Caulobacter crescentus CB15] Length = 305 Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 76/248 (30%), Positives = 131/248 (52%), Gaps = 3/248 (1%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A+TI + + G ++ + V + R +Y L N+++A +YF + Sbjct: 10 AVTIAAVLVAASVAGCAGKAKKPTL---VYEERPVELLYSTGADRLDRGNWNEAVDYFRE 66 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 R P++ +R+S+LM+ + Y +Y +A + +I+ YP + + Y +YL + Y Sbjct: 67 VERQHPYSEWSRRSILMTGYAHYMGNQYAEAIGDADRFISLYPGNPSAQYAFYLKAICYF 126 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + I DV DQ AT+ L + +V+RY N+ Y AR + + +QLA KE+ IGR+YLK Sbjct: 127 EQIVDVNRDQAATEQALAALRDVVQRYPNTEYATDARLKIDMVNDQLAGKEMAIGRWYLK 186 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 G+ +AAI RF+ V+ + H EA+ RLVEAY+ + L +EA+ +++ +P W Sbjct: 187 NGQTLAAIGRFKAVIERHQTTSHTPEALFRLVEAYLTIGLNEEAKRNGAVLGYNFPGDRW 246 Query: 263 ARYVETLV 270 L+ Sbjct: 247 YVDAYRLL 254 >gi|94310294|ref|YP_583504.1| hypothetical protein Rmet_1352 [Cupriavidus metallidurans CH34] gi|93354146|gb|ABF08235.1| DNA uptake lipoprotein [Cupriavidus metallidurans CH34] Length = 278 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 60/248 (24%), Positives = 107/248 (43%), Gaps = 19/248 (7%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 ++ C L+G T ++Y +A L ++++A + + + + Sbjct: 27 VMLSACGLLG---------DQPDETAGWSANKLYSEAKDALDGGDYTRAVKLYEKLEGRY 77 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--- 144 PF A+++ + +A+ Y G+ A + + +I +P N+DY YYL G+ Sbjct: 78 PFGRYAQQAQIDTAYANYKDGETAAALAAVDRFIQLHPSHPNIDYAYYLKGLINFNDNLG 137 Query: 145 -------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 D +A + ++ RY +S Y A + N LA EV Sbjct: 138 WLGRFSGQDLSERDPKAARAAYDAFQILITRYPDSKYTPDATLRMQYIVNSLAQHEVHAA 197 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 RYY +RG Y+AA+ R Q L +Y A EEA+ +V +Y AL + D + +++ Y Sbjct: 198 RYYYRRGAYLAAVNRAQQALKDYDGAPANEEALYIMVRSYDALGMKDLRDDAARVMERNY 257 Query: 258 PQGYWARY 265 P + +Y Sbjct: 258 PNSDYIKY 265 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 37/123 (30%), Gaps = 22/123 (17%) Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFV--------------QYSAGKYQQAASLGEEY 120 AY+ F +P + + L ++ Y G Y A + ++ Sbjct: 157 AAYDAFQILITRYPDSKYTPDATLRMQYIVNSLAQHEVHAARYYYRRGAYLAAVNRAQQA 216 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + Y + + Y++ SY + D + Y NS Y+K + Sbjct: 217 LKDYDGAPANEEALYIMVRSYDALGMKDLRD--------DAARVMERNYPNSDYIKYGQR 268 Query: 181 YVT 183 Sbjct: 269 RKD 271 >gi|253999418|ref|YP_003051481.1| outer membrane assembly lipoprotein YfiO [Methylovorus sp. SIP3-4] gi|253986097|gb|ACT50954.1| outer membrane assembly lipoprotein YfiO [Methylovorus sp. SIP3-4] Length = 268 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 111/255 (43%), Gaps = 16/255 (6%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + A ++ C + G + T + +Y +A ++ +++ KA +Y Sbjct: 3 HSLAFIAVLWLSGCAIFGAPTELDE-------TKGWSAQRIYTEADEKMRSRDYEKAIKY 55 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F +P A ++ + + Y + + +I +P+ N+DY YY+ G+ Sbjct: 56 FETLESRYPHGRFATQAQMDKIYAYYKRNDPISTIAAADRFIKLHPDHPNIDYAYYMKGL 115 Query: 140 SYAQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 + + D ++ + + +V RY NS YVK A +T + LA Sbjct: 116 ATFNERGVIEKLTKQQISDRDPKSLRESFLALKELVTRYPNSRYVKDATLRMTYLVDMLA 175 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 E+ + RYY+KR Y+A++ R + VL Y D+ EEA+ ++ AY + + D ++ + Sbjct: 176 NSELHVARYYMKRQAYLASVNRCKFVLETYPDSPSVEEALVIMISAYDLMGMTDLKQDTL 235 Query: 251 SLIQERYPQGYWARY 265 ++Q YP + Sbjct: 236 RVLQTNYPDSKMLKK 250 >gi|332188478|ref|ZP_08390200.1| hypothetical protein SUS17_3597 [Sphingomonas sp. S17] gi|332011490|gb|EGI53573.1| hypothetical protein SUS17_3597 [Sphingomonas sp. S17] Length = 311 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 73/235 (31%), Positives = 119/235 (50%), Gaps = 3/235 (1%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G R +R DV +Y A L + + +A F++ R P++ AR++ Sbjct: 23 GCARNRTRTDLPYVARDVGT---LYTAAKQRLDQHRYKEAALLFDEVERQHPYSIWARRA 79 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 LMSAF Y Y Q+ + ++ +P +++ Y YYL+ + Y + I+DV DQ+ T+ Sbjct: 80 QLMSAFSYYLGRDYTQSIQSAQRFLAVHPGNRDAPYAYYLIALGYYEQIQDVTRDQKITR 139 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L + ++ RY N+ Y AR V + + LA KE+EIGR+Y R +++AA RF+ V Sbjct: 140 QALDALGELMRRYPNTRYAADARLKVDLVNDHLAGKEMEIGRFYEDRHQWLAASMRFRTV 199 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + Y H EA+ RL E Y+AL + EA +++ YP W L++ Sbjct: 200 VDKYQTTSHTPEALMRLTETYLALGVRPEAERAAAVLGANYPGSDWYNRAYKLMR 254 >gi|85714984|ref|ZP_01045969.1| putative lipoprotein [Nitrobacter sp. Nb-311A] gi|85698181|gb|EAQ36053.1| putative lipoprotein [Nitrobacter sp. Nb-311A] Length = 298 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 72/244 (29%), Positives = 126/244 (51%), Gaps = 3/244 (1%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAYEYFNQCSRD 86 F++A C + + + ++Y + + + ++ + A + F++ R+ Sbjct: 32 FTVAGCGTGPLLDKFT--AKDEQTFSDEPADKLYNEGLFLMNKEHDLKAATKKFDEVDRE 89 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 P++ ARKSLLMSA+ Y AG Y Y+T +P + + Y YL+ +S I Sbjct: 90 HPYSEWARKSLLMSAYASYQAGDYDTCIGSASRYVTLHPGTPDAAYAQYLIAVSNYDQIP 149 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 DV DQ T+ + + ++ +Y S Y A+ + R+QLA KE+ IGRYY++R +Y Sbjct: 150 DVSRDQARTEKAMHALEEVIRKYPTSEYAGEAKKKLQGARDQLAGKEMAIGRYYMERRDY 209 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 AI R++ V+ + H EEA+ARL EAY+A+ ++ EA+ +++ +P W + Sbjct: 210 TGAINRYKTVVTRFQTTRHVEEALARLTEAYMAIGIVAEAQTAAAVLGHNFPDSRWYKDA 269 Query: 267 ETLV 270 LV Sbjct: 270 YNLV 273 >gi|163760778|ref|ZP_02167858.1| hypothetical protein HPDFL43_13018 [Hoeflea phototrophica DFL-43] gi|162282100|gb|EDQ32391.1| hypothetical protein HPDFL43_13018 [Hoeflea phototrophica DFL-43] Length = 288 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 77/251 (30%), Positives = 132/251 (52%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + AL I V LV + + +Y + + ++ ++A F Sbjct: 14 RVALFIAGLTGVASLVSGCQSDPDIDITAYAQTIEPADVLYNQGLANIQAGQLTEASRKF 73 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + P++ ARK+++MSAF Y G+Y +A + Y++ YP ++ Y Y+VG+S Sbjct: 74 QAVDKQHPYSEYARKAMVMSAFTNYRQGQYSEAINTASRYLSLYPNDEDAAYAQYIVGLS 133 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 Y + I +V DQR + + + ++ER+ S YV+ ++ + R+QLA KE+++GRYY Sbjct: 134 YYRQIPEVTRDQRTSARAIAAFTEVIERFPESEYVEDSQAKLRYARDQLAGKEMQVGRYY 193 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L+R E+VAA RF+LV+ Y + EEA+ARLVE Y A+ L EA+ +++ +P Sbjct: 194 LERKEFVAAANRFRLVVERYPNTRQIEEALARLVETYYAMGLESEAQTAAAVLGHNFPDS 253 Query: 261 YWARYVETLVK 271 W L++ Sbjct: 254 QWYADSFNLLR 264 >gi|119775738|ref|YP_928478.1| putative lipoprotein [Shewanella amazonensis SB2B] gi|119768238|gb|ABM00809.1| putative lipoprotein [Shewanella amazonensis SB2B] Length = 283 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 59/271 (21%), Positives = 106/271 (39%), Gaps = 16/271 (5%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 M L + Y+ K + F++A L S++ D V + + Sbjct: 15 MEEFLTTTSKELNSSMYKFAKGSAVALFALA---LGACSSSGSQE---DLVLSQKSPEAL 68 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A ++ NFSKA + FPF + L + Y QA + + + Sbjct: 69 YAQARTSMELGNFSKAVKSLEALDSRFPFGAHKTQVQLDMIYAYYKLDDTPQAIANIDRF 128 Query: 121 ITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYT 170 + P +VDYV Y+ G+ Q I D + + R+++ Y Sbjct: 129 LRLNPTHPDVDYVQYMRGLVNMQADSYLFHDMMNIDRTDRDPKNAMDAFKDFERLIKTYP 188 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 NS Y A + +N+LA +++ YY+K + AA R Q V+ ++ E A+ Sbjct: 189 NSKYAADAHQRMQFLKNRLARYSIQVAEYYVKMNAWSAAAVRAQTVMESFPGTPSTERAL 248 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + ++Y L + V+ ++QE +P Sbjct: 249 EIMAQSYDELGQEQLKKHVLMVMQENFPANE 279 >gi|157962984|ref|YP_001503018.1| putative lipoprotein [Shewanella pealeana ATCC 700345] gi|157847984|gb|ABV88483.1| putative lipoprotein [Shewanella pealeana ATCC 700345] Length = 268 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 57/271 (21%), Positives = 100/271 (36%), Gaps = 17/271 (6%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 M L + + +++ K + ++A S D + Sbjct: 1 MEKFLTITLKESNSSMHKIAKSVAVVLITLAATAC-------SSKQGEDPAMTKSSPEVL 53 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A ++ N+SKA FPF + L + Y + + + Sbjct: 54 YSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRF 113 Query: 121 ITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYT 170 I P K++DYVYY+ G+ Q I D +A + R+++ Y Sbjct: 114 IRLNPTHKDIDYVYYMRGLVNMQSDRYLFHDMLNIDRSDRDPKAAQDAFNDFDRLIKSYP 173 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 NS Y A+ + +N+LA +++ YY+K + AA R Q VL Y E+A+ Sbjct: 174 NSKYAADAQKRMQHLKNRLALYSIKVAEYYIKMNAWSAAAIRAQSVLETYPGTPSTEKAL 233 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + AY L V+ +++ YP Sbjct: 234 EIMSTAYGELGQEKLKDHVLMVMKANYPNNK 264 >gi|255263345|ref|ZP_05342687.1| tetratricopeptide TPR_2 repeat protein [Thalassiobium sp. R2A62] gi|255105680|gb|EET48354.1| tetratricopeptide TPR_2 repeat protein [Thalassiobium sp. R2A62] Length = 284 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 74/245 (30%), Positives = 124/245 (50%), Gaps = 3/245 (1%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 I + V L G SR + E++++ L A YF + R Sbjct: 15 IGTVLVVGLLAGCGSFDSR---PKVPLENYSAEEIFQRGEFELNRGREDDAAFYFGEIER 71 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +P++ A+++L+M AF + Y + S + +I YP ++ Y YL+ +SY I Sbjct: 72 LYPYSEWAKRALIMQAFAYHKDRDYPNSRSSAQRFIDFYPADEDAAYAQYLLALSYYDQI 131 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 ++ DQ T LQ + ++ERY +S Y + + + + LAAKE+EIGRYY++ G Sbjct: 132 DEIGRDQGLTFQALQALRTVIERYPDSEYARSSILKFDLAFDHLAAKEMEIGRYYIQDGH 191 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 Y A+I RF+ V+ ++ H EA+ RLVEAY++L L DEA+ +++ Y W + Sbjct: 192 YAASINRFRTVVEDFQTTSHTPEALHRLVEAYLSLGLTDEAQTAGAILGHNYQSTEWYQD 251 Query: 266 VETLV 270 +L+ Sbjct: 252 SYSLL 256 >gi|146283957|ref|YP_001174110.1| competence protein ComL [Pseudomonas stutzeri A1501] gi|145572162|gb|ABP81268.1| competence protein ComL [Pseudomonas stutzeri A1501] Length = 374 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 17/244 (6%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + + D L V E+Y++A L ++++ A Sbjct: 51 LLLIAIFALTAACSSNETVDENLGEV-------ELYQQAQADLDNKSYTSAISKLKALES 103 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +PF A ++ L + Y + + A S E +I +P+ NVDY YYL G++ Sbjct: 104 RYPFGRFAEQAQLELIYAYYRNAEPEAARSAAERFIRLHPQHPNVDYAYYLKGLASFDQD 163 Query: 146 RDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 R + D A + +++ RY NS Y A+ + RN LAA E+ Sbjct: 164 RGLLARFLPLDMTKRDPGAARDSFNEFAQLTSRYPNSRYSPDAKARMIYLRNLLAANEIH 223 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + YYLKR YVAA R + V+ N+ + +A + EAY L L D A + +Q Sbjct: 224 VAHYYLKRQAYVAAANRGRYVVENFQGTPAVADGLAVMTEAYQRLGLDDLADASLKTLQL 283 Query: 256 RYPQ 259 YP Sbjct: 284 NYPD 287 >gi|313201440|ref|YP_004040098.1| outer membrane assembly lipoprotein yfio [Methylovorus sp. MP688] gi|312440756|gb|ADQ84862.1| outer membrane assembly lipoprotein YfiO [Methylovorus sp. MP688] Length = 268 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 111/255 (43%), Gaps = 16/255 (6%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + A ++ C + G + T + +Y +A ++ +++ KA +Y Sbjct: 3 HSLAFIAVLWLSGCAIFGAPTELDE-------TKGWSAQRIYTEADEKMRSRDYEKAIKY 55 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F +P A ++ + + Y + + +I +P+ N+DY YY+ G+ Sbjct: 56 FETLESRYPHGRFATQAQMDKIYAYYKRNDPISTIAAADRFIKLHPDHPNIDYAYYMKGL 115 Query: 140 SYAQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 + + D ++ + + +V RY NS YVK A +T + LA Sbjct: 116 ATFNERGVIEKLTKQQISDRDPKSLRESFLALKELVTRYPNSRYVKDATLRMTYLVDMLA 175 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 E+ + RYY+KR Y+A++ R + VL Y D+ EEA+ ++ AY + + D ++ + Sbjct: 176 NSELHVARYYMKRQAYLASVNRCKFVLETYPDSPSVEEALVIMISAYDLMGMDDLKQDTL 235 Query: 251 SLIQERYPQGYWARY 265 ++Q YP + Sbjct: 236 RVLQTNYPDSKMLKK 250 >gi|115524131|ref|YP_781042.1| putative lipoprotein [Rhodopseudomonas palustris BisA53] gi|115518078|gb|ABJ06062.1| putative lipoprotein [Rhodopseudomonas palustris BisA53] Length = 301 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 74/239 (30%), Positives = 123/239 (51%), Gaps = 3/239 (1%) Query: 36 VGWERQS--SRDVYLDSVTDVRYQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGV 92 G + + + D ++Y + + + + ++ A + F + R P++ Sbjct: 39 TGCGTGAIWDKFLTKDETYTDEPADKLYNEGLYLMNQSKDPKAASKKFEEVDRQHPYSDW 98 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 ARKSLLMSA+ Y AG Y Y+T +P S + Y YL+ S+ I D+ DQ Sbjct: 99 ARKSLLMSAYAYYEAGDYDNCIGSATRYVTMHPGSADAAYAQYLIAASHYDQIPDISRDQ 158 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 T+ + + ++ +Y S Y A+ + R+QLA KE+ +GRYY++R +Y AAI R Sbjct: 159 GRTEKAMAALEEVIRKYPTSEYATTAKKKLEGARDQLAGKEMAVGRYYMERRDYTAAINR 218 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 F+ V+ Y H EEA+ARL EAY+A+ ++ EA+ +++ +P W + LVK Sbjct: 219 FKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPDSRWYKDAYNLVK 277 >gi|110634349|ref|YP_674557.1| putative lipoprotein [Mesorhizobium sp. BNC1] gi|110285333|gb|ABG63392.1| putative lipoprotein [Chelativorans sp. BNC1] Length = 288 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 86/235 (36%), Positives = 137/235 (58%), Gaps = 1/235 (0%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + D+ V +Y + + L +A F R P++ ARK+ Sbjct: 31 GCNAEKDLDLST-YVEQTEPADVLYNQGLANLNAGRMREAIAKFEAVDRQHPYSEFARKA 89 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L+M+AF Y GKY +A + G+ Y+T YP S++ Y YLVG+SY + I+DV DQR + Sbjct: 90 LIMNAFANYRQGKYTEAINAGKRYVTLYPTSEDAAYAQYLVGLSYFRQIKDVTQDQREAR 149 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L ++ M ++V+ + S YV A+ + R+QLA KE+++GRYYL+R EY+AA+ RF+ V Sbjct: 150 LTIEAMQQVVDVWPESEYVTDAQAKIRFARDQLAGKEMQVGRYYLERREYIAAVRRFRGV 209 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + NY + H EEA+ARLVEAY+A+ + EA+ +++ +P W + TL++ Sbjct: 210 VENYGNTRHVEEALARLVEAYLAMGIASEAQTAAAVLGHNFPDSQWYKDSYTLLQ 264 >gi|304321637|ref|YP_003855280.1| competence lipoprotein ComL [Parvularcula bermudensis HTCC2503] gi|303300539|gb|ADM10138.1| competence lipoprotein ComL, putative [Parvularcula bermudensis HTCC2503] Length = 308 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 79/250 (31%), Positives = 131/250 (52%), Gaps = 2/250 (0%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K ALT S+ + ++ D L V + +Y KA L+ + + +A F Sbjct: 4 KIALTALGSVLLALGGCSNFGNAPDDRLAYVEE--PVEILYRKAADALERRRYEEAVLLF 61 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + R P++ AR+++LM A+ +Y Y + + + ++ +P +K+ Y YYL ++ Sbjct: 62 EEVERQHPYSSWARRAMLMVAYSEYLQNNYDASIASIDRFLAVHPGNKDAAYAYYLRAIN 121 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 Y + IRDV DQ T L + ++ RY +S Y + A + + R+ LA KE++IGR+Y Sbjct: 122 YYERIRDVGRDQDITAQALSALEDVIRRYPDSDYARDASLKLDLTRDHLAGKEMDIGRWY 181 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 LKR E++AAI RF VL Y H EA+ RLVEAY+ + + EA+ +++ YP Sbjct: 182 LKRNEHIAAINRFNEVLTTYETTSHVPEALHRLVEAYLEMGVAFEAQRHAAILAHNYPDS 241 Query: 261 YWARYVETLV 270 W R ++ Sbjct: 242 NWYRDSYRML 251 >gi|73541037|ref|YP_295557.1| transmembrane protein [Ralstonia eutropha JMP134] gi|72118450|gb|AAZ60713.1| probable transmembrane protein [Ralstonia eutropha JMP134] Length = 271 Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 12/250 (4%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDV--RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 A+ G S+ + D + ++Y +A L ++S+A + + + +P Sbjct: 12 AILLAGGCVMLSACGLLADQPDETAGWSANKLYSEAKDALDGGDYSRAVKLYEKLEGRYP 71 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---- 144 F A+++ + +A+ Y G+ A + + +I +P N+DY YYL G+ Sbjct: 72 FGRYAQQAQIDTAYASYKDGETAAALAAVDRFIQLHPSHPNIDYAYYLKGLINFNDNLGW 131 Query: 145 ------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D +A + + +V R+ +S Y A + N LA EV R Sbjct: 132 LGRFSGQDLSERDPKAARAAYDAFNTLVTRFPDSKYTPDAAARMQYIVNSLAQHEVHAAR 191 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YY KRG Y+AA+ R Q L +Y A EEA+ ++ +Y +L + D + +++ +P Sbjct: 192 YYYKRGAYLAAVNRAQQALKDYDGAPANEEALYIMIRSYDSLGMKDLRDDTARVMERNFP 251 Query: 259 QGYWARYVET 268 + +Y E Sbjct: 252 NSDYIKYGER 261 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 37/123 (30%), Gaps = 22/123 (17%) Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFV--------------QYSAGKYQQAASLGEEY 120 AY+ FN FP + + ++ Y G Y A + ++ Sbjct: 150 AAYDAFNTLVTRFPDSKYTPDAAARMQYIVNSLAQHEVHAARYYYKRGAYLAAVNRAQQA 209 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + Y + + Y++ SY + D A + + NS Y+K Sbjct: 210 LKDYDGAPANEEALYIMIRSYDSLGMKDLRDDTA--------RVMERNFPNSDYIKYGER 261 Query: 181 YVT 183 Sbjct: 262 RKD 264 >gi|170748766|ref|YP_001755026.1| putative lipoprotein [Methylobacterium radiotolerans JCM 2831] gi|170655288|gb|ACB24343.1| putative lipoprotein [Methylobacterium radiotolerans JCM 2831] Length = 293 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 76/242 (31%), Positives = 130/242 (53%), Gaps = 3/242 (1%) Query: 32 VCFLVGWERQSSR---DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 L G + + + Y V ++Y + L++ ++ A + F+ + + Sbjct: 22 GLGLGGCDFDPTSIFAEKYKPEVVPDVPADKLYSDGLAKLEDSDYEGAVKKFDNLDKQYQ 81 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 ++ +RK+LLM+A+ Y KY A S + Y+ ++P SK+ Y YL+ MS + I DV Sbjct: 82 YSEWSRKALLMTAYANYEGQKYDDAISASKRYLQRHPASKDAAYAQYLMAMSNYKQIPDV 141 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 DQ ++ L + +V++Y S Y A+ + + R+QLA KE+EIGR+YL++ + A Sbjct: 142 TRDQERSEKALVALQELVQKYPTSEYAADAKAKIQITRDQLAGKEMEIGRFYLEKRNFPA 201 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 AI RF+ V+A Y HAEEA+ RL EAY AL + EA+ +++ +P+ W + Sbjct: 202 AINRFRDVVAKYQTTRHAEEALERLTEAYWALGITQEAQNAAAVLGHNFPESPWYKDAHA 261 Query: 269 LV 270 L+ Sbjct: 262 LL 263 >gi|328542974|ref|YP_004303083.1| DNA uptake lipoprotein-like protein [polymorphum gilvum SL003B-26A1] gi|326412720|gb|ADZ69783.1| DNA uptake lipoprotein-like protein [Polymorphum gilvum SL003B-26A1] Length = 286 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 84/251 (33%), Positives = 137/251 (54%), Gaps = 3/251 (1%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K A+ + + V L S +D D D ++ + + S A + F Sbjct: 15 KVAVLLRSLVLVSALALGACASDKD---DLALDDTPAEVLFNEGLALRNAGRLSDAGKKF 71 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 ++ + +P++ ARKSL+ AF+ +S G+Y +A + E + T YP S++ Y Y++G S Sbjct: 72 SELDKLYPYSEYARKSLINLAFINFSLGRYPEAIAASERFTTLYPGSEDSAYALYIIGQS 131 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 Y + I DV DQ T+ L ++ ++ RY +S Y A+ V V +QLA KE+++GRYY Sbjct: 132 YFRQIPDVTRDQEQTEKALSALNELIRRYPDSEYTADAKSKVLVAYDQLAGKEMQVGRYY 191 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L R Y+AAI RF++V+ NY H EEA+ RL E+Y AL +++EA+ +++ YP Sbjct: 192 LDRRNYIAAINRFKMVVINYQTTRHVEEALFRLTESYYALGVVNEAQTAAAVLGHNYPDS 251 Query: 261 YWARYVETLVK 271 W + L+K Sbjct: 252 RWYKDAFALLK 262 >gi|163750157|ref|ZP_02157400.1| hypothetical protein KT99_20856 [Shewanella benthica KT99] gi|161330214|gb|EDQ01196.1| hypothetical protein KT99_20856 [Shewanella benthica KT99] Length = 269 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 56/271 (20%), Positives = 102/271 (37%), Gaps = 17/271 (6%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 M +L + + ++ K A+ FSIA + ++ + R + Sbjct: 1 MEKILTTTLKESKLSMHKFAKGAVLALFSIA---ITACSSSPDEELKANK----RSPDVL 53 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A ++ NFSKA +PF + L + Y + + + Sbjct: 54 YSQARTSMELGNFSKAVRSLEALDSRYPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRF 113 Query: 121 ITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYT 170 I P K++DYVYY+ G+ Q I D + + + R+++ Y Sbjct: 114 IRLNPTHKDIDYVYYMRGLVNMQSDSYMFHDMLNIDRTDRDPKVAQDAFKDFDRLIKSYP 173 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 NS Y A + +N+LA + + YY+K + AA R Q V+ Y E A+ Sbjct: 174 NSKYAYDAAQRMQFLKNRLAKYSINVAEYYMKMNAWSAAAIRAQSVMETYPGTPSTEHAL 233 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + +AY L +++++ Y Sbjct: 234 EIMADAYGELGQEKLKENTLTVMKANYLGNK 264 >gi|170744725|ref|YP_001773380.1| putative lipoprotein [Methylobacterium sp. 4-46] gi|168198999|gb|ACA20946.1| putative lipoprotein [Methylobacterium sp. 4-46] Length = 298 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 73/252 (28%), Positives = 136/252 (53%), Gaps = 5/252 (1%) Query: 25 TIFFSIAVCFLVGWERQSS-----RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + L + S + Y V + R ++Y + + L++ ++ +A + Sbjct: 17 VALLAACGAGLSACDALDSINPFGPEKYKPEVIERRPADKIYSEGLAKLEDHDYDEAVKR 76 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F +++ ++ +RK++LM+A+ Y KY+ A + + Y+ ++P SK+ Y Y++ M Sbjct: 77 FQNLDKEYAYSDWSRKAVLMTAYANYEGAKYEDAITAAKRYLQRHPGSKDAAYAQYILAM 136 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S+ + I DV DQ ++ L + +V++Y S Y A+ + + R+QLA KE+ +GRY Sbjct: 137 SHYKQIPDVTRDQERSERALAALQELVQKYPTSEYAADAKAKIQITRDQLAGKEMTVGRY 196 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YL R + AAI RF+ V++ Y HAEEA+ RL EAY+AL ++ EA+ +++ +P Sbjct: 197 YLDRRNFPAAINRFREVVSKYQTTRHAEEALERLAEAYMALGIVAEAQTAAAVLAHNFPD 256 Query: 260 GYWARYVETLVK 271 W + L++ Sbjct: 257 SPWYKDAYALLQ 268 >gi|309378793|emb|CBX22619.1| competence lipoprotein ComL [Neisseria lactamica Y92-1009] Length = 268 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 114/259 (44%), Gaps = 13/259 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K L + S+A+C + +D T ++Y +A L N+++A + Sbjct: 1 MKKILLMVSLSLALCACASSQGTVDKDT---QTTQGWGVEKLYAEAQDELGGGNYTRAVK 57 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + FP A+++LL +A+ Y + +A + + + YP+ N+DY YL G Sbjct: 58 LYEILGSRFPTGRYAQQALLDTAYAYYKDDEKDKALAAIDRFRNLYPQHPNMDYALYLRG 117 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + D +A + Q + +V R+ +S Y A + + Sbjct: 118 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVRRFPDSKYAADASARMIKLVDA 177 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A + Sbjct: 178 LGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 237 Query: 249 VVSLIQERYPQGYWARYVE 267 +++ +P+ + + Sbjct: 238 TRRVLETNFPKSPFLTHAW 256 >gi|222149127|ref|YP_002550084.1| hypothetical protein Avi_2880 [Agrobacterium vitis S4] gi|221736112|gb|ACM37075.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 289 Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats. Identities = 87/249 (34%), Positives = 143/249 (57%), Gaps = 1/249 (0%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 L + SIA + + +D+ + + + +Y + + +K N ++A F+ Sbjct: 16 LAVCLSIAGVAPLLSACNTDKDIDITKLGAETDPPETLYNQGLANIKAGNLAEASRKFDA 75 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 + PF+ ++K+L+MS FV+Y GKY +A S G Y+T YP +K+ YV YL+G+S Sbjct: 76 VDKQNPFSDWSQKALVMSTFVKYRQGKYTEAISTGTRYMTLYPSTKDSAYVQYLIGLSNW 135 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + I +V DQ+ + L+ M ++V+ Y S YV A+ + R+QLA KE++IGRYYL+ Sbjct: 136 RQIPNVTQDQKFSSRTLEAMDKVVKNYPTSEYVSDAQEKMRFARDQLAGKEMQIGRYYLE 195 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 R EY+A+I RF+ V+ Y EEA+ARLVEAY A+ ++ EA+ +++ YP W Sbjct: 196 RKEYLASIQRFRNVVEQYPTTNQIEEALARLVEAYYAMGVVQEAQTAAAVLGHNYPDSKW 255 Query: 263 ARYVETLVK 271 + L+K Sbjct: 256 YKDSFELLK 264 >gi|240850884|ref|YP_002972284.1| competence lipoprotein ComL precursor [Bartonella grahamii as4aup] gi|240268007|gb|ACS51595.1| competence lipoprotein ComL precursor [Bartonella grahamii as4aup] Length = 297 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 87/256 (33%), Positives = 136/256 (53%), Gaps = 1/256 (0%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDS-VTDVRYQREVYEKAVLFLKEQNFSK 75 + + + L + + C L G + + + V + +Y +A+ L+ Sbjct: 16 FNIVRKILGVVLLGSTCMLAGCLFKEKNTLDPSAYVLKIEPPDVLYNQALASLESGKLGD 75 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + F + + + + RKSL+M AF Y GKY + S+ + YIT YP S + Y YY Sbjct: 76 ASKKFLKIEKQYAYTDWGRKSLVMGAFTNYRLGKYDDSISMAQRYITLYPGSTDSAYAYY 135 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 ++G+S + I DV DQR TK + M ++ERY NS YVK A+ + GR QLA KE++ Sbjct: 136 IIGLSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPNSEYVKDAKDKIRFGREQLAGKEMQ 195 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 IGRYY + Y+AA RF+ V+ YSD EEA+ RL E +AL L EA+ +++ Sbjct: 196 IGRYYEEGRRYLAASRRFRTVVEEYSDTNQIEEALFRLTEVNLALGLTAEAQTAAAILGR 255 Query: 256 RYPQGYWARYVETLVK 271 YP+ W ++ L++ Sbjct: 256 NYPKSEWYKFSYNLLQ 271 >gi|91775966|ref|YP_545722.1| putative competence lipoprotein precursor [Methylobacillus flagellatus KT] gi|91709953|gb|ABE49881.1| putative competence lipoprotein precursor [Methylobacillus flagellatus KT] Length = 267 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 16/250 (6%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + AL + C + G + T + +Y AV + +++ KA +Y Sbjct: 3 HSLALIAVLWLTGCAIFGAPTELDE-------TKGWPVQRIYAAAVENMTTRDYEKAIKY 55 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F +P A +S L + Y + + +I +P NVDY YY+ G+ Sbjct: 56 FQILESRYPHGRYATQSQLEVIYAHYKKNDPAATMAAADRFIKLHPNHPNVDYAYYMKGL 115 Query: 140 SYAQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 + + D ++ + + +V R+ NS YVK A ++ N LA Sbjct: 116 ATFNERGIIEKLTKQQISDRDPKSLRESFLALKELVNRFPNSRYVKDATLRMSYLVNSLA 175 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 E+ + RYY+KR YVAA R + V+ Y D H EEA+ L+ AY A+++ D + Sbjct: 176 QHELHVARYYMKRQAYVAAANRCKYVMEFYPDTPHIEEALVILISAYDAMSMDDLRDDAK 235 Query: 251 SLIQERYPQG 260 ++ + YP Sbjct: 236 RVLAQNYPNS 245 >gi|82703096|ref|YP_412662.1| TPR repeat-containing protein [Nitrosospira multiformis ATCC 25196] gi|82411161|gb|ABB75270.1| TPR repeat [Nitrosospira multiformis ATCC 25196] Length = 266 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 14/231 (6%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T + Y +A L + N++ A + F +P+ A+++ L + Y G+ Sbjct: 24 EDTKAWSASKYYTEAKSELNDGNYAAAIKLFEALEARYPYGRYAQQAQLEIGYAHYKDGE 83 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI--------------RDVPYDQRAT 155 A + + +I +P NVDY YYL G++ D +A+ Sbjct: 84 QALAIAAADRFIKLHPNHPNVDYAYYLKGLANFNDDLGLMGIVTEKILNQDMSERDPKAS 143 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + +V R+ S Y A + N +A E+++ RYY+KRG YVAA R Q Sbjct: 144 HESFENFKELVNRFPKSKYAPDAVQRMKHLVNVVALNEIQVARYYMKRGGYVAAANRAQY 203 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 L Y EEA+ +V+AY AL + D + ++++ +P + Sbjct: 204 ALKEYPQTPATEEALFIMVKAYDALGMTDLRDDADRVMRKNFPNSRFLSDS 254 >gi|261400384|ref|ZP_05986509.1| competence lipoprotein ComL [Neisseria lactamica ATCC 23970] gi|269209821|gb|EEZ76276.1| competence lipoprotein ComL [Neisseria lactamica ATCC 23970] Length = 268 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 59/254 (23%), Positives = 113/254 (44%), Gaps = 13/254 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K L + S+A+C + +D T ++Y +A L N+++A + Sbjct: 1 MKKILLMVSLSLALCACASSQGTVDKDT---QTTQGWGVEKLYAEAQDELGGGNYTRAVK 57 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + FP A+++LL +A+ Y + +A + + + YP+ N+DY YL G Sbjct: 58 LYEILGSRFPTGRYAQQALLDTAYAYYKDDEKDKALAAIDRFRNLYPQHPNMDYALYLRG 117 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + D +A + Q + +V R+ +S Y A + + Sbjct: 118 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVRRFPDSKYAADASARMIKLVDA 177 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A + Sbjct: 178 LGGNEMAVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 237 Query: 249 VVSLIQERYPQGYW 262 +++ +P+ + Sbjct: 238 TRRVLETNFPKSPF 251 >gi|325293455|ref|YP_004279319.1| lipoprotein [Agrobacterium sp. H13-3] gi|325061308|gb|ADY64999.1| lipoprotein [Agrobacterium sp. H13-3] Length = 288 Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 79/253 (31%), Positives = 138/253 (54%), Gaps = 1/253 (0%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + A+++ A + + D+ V + +Y++ + + N ++A Sbjct: 13 MRGIAVSLMLVGASVAVTACQSDPDIDITKLGV-ETDPPDVLYKQGLANMNAGNMTEASR 71 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F + +PF +K+L+M F+ K A + G ++ QYP SK+ YV Y++G Sbjct: 72 KFEAIDKQYPFTEWGQKALVMQTFIATRTNKNDVAIASGSRFLRQYPRSKDAAYVQYMIG 131 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 ++Y++ I DV DQRA + ++ MS++V Y +S YV A+ + R+QLA +E+++GR Sbjct: 132 LAYSKQISDVTQDQRAAQRTVEAMSKVVNDYPDSEYVADAQAKIRFARDQLAGREMQVGR 191 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYL+R EY+AA+ RF++V+ Y + EEA+ARL E+Y A+ L DEA+ +++ YP Sbjct: 192 YYLERKEYLAAVSRFRIVVEQYQNTNQIEEALARLTESYYAMGLSDEAQTAAAVLGNNYP 251 Query: 259 QGYWARYVETLVK 271 W L+K Sbjct: 252 DSQWYADSYKLLK 264 >gi|222086434|ref|YP_002544968.1| hypothetical protein Arad_2982 [Agrobacterium radiobacter K84] gi|221723882|gb|ACM27038.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 289 Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats. Identities = 93/255 (36%), Positives = 147/255 (57%), Gaps = 1/255 (0%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKA 76 ++ AL + +A V + +D+ + + + +Y + + +K N ++A Sbjct: 10 KITARALLVSLLLAGTGAVVTGCNTDKDIDISKLGVETDPPETLYNQGLANIKAGNMAEA 69 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 F+ ++ PF+ ARK+L+MS FV+Y G+Y A G Y+ QYP S++ DYV YL Sbjct: 70 GRKFDAINQQQPFSEWARKALVMSTFVKYRTGRYDDAVQSGNSYLKQYPGSEDADYVQYL 129 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 VG SYA+ I V DQRA + ++ MS++V Y +S YV A+ + R+QLA KE++I Sbjct: 130 VGSSYAKQIVSVTQDQRAAQQTIEAMSKVVTNYPSSQYVSDAQAKIRFARDQLAGKEMQI 189 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 GRYYL+R +Y+AAI RF++V+ Y EEA+ARLVEAY A+ ++ EA+ +++ Sbjct: 190 GRYYLERKDYLAAISRFRIVIEQYPTTNQIEEALARLVEAYYAMGIVQEAQTAAAVLGHN 249 Query: 257 YPQGYWARYVETLVK 271 YP W L+K Sbjct: 250 YPDSRWYADSFKLLK 264 >gi|313668817|ref|YP_004049101.1| competence lipoprotein [Neisseria lactamica ST-640] gi|313006279|emb|CBN87742.1| competence lipoprotein [Neisseria lactamica 020-06] Length = 268 Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 114/259 (44%), Gaps = 13/259 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K L + S+A+C + +D T ++Y +A L N+++A + Sbjct: 1 MKKILLMVSLSLALCACASSQGTVDKDT---QTTQGWGVEKLYAEAQDELGGGNYTRAVK 57 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + FP A+++LL +A+ Y + +A + + + YP+ N+DY YL G Sbjct: 58 LYEILGSRFPTGRYAQQALLDTAYAYYKDDEKDKALAAIDRFRNLYPQHPNMDYALYLRG 117 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + D +A + Q + +V R+ +S Y A + + Sbjct: 118 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVRRFPDSKYAADASARMIKLVDA 177 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A + Sbjct: 178 LGGNEMAVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 237 Query: 249 VVSLIQERYPQGYWARYVE 267 +++ +P+ + + Sbjct: 238 TRRVLETNFPKSPFLTHAW 256 >gi|307293329|ref|ZP_07573175.1| outer membrane assembly lipoprotein YfiO [Sphingobium chlorophenolicum L-1] gi|306881395|gb|EFN12611.1| outer membrane assembly lipoprotein YfiO [Sphingobium chlorophenolicum L-1] Length = 261 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 68/236 (28%), Positives = 120/236 (50%), Gaps = 3/236 (1%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G ++ DV +Y L + A F++ R P++ AR+ Sbjct: 23 SGCATSKNKADTQYVARDVST---LYNAGKYRLDRGQYKLAAALFDEVERQHPYSPWARR 79 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + LMSAF Y Y ++ + +++ + +K+ Y YYL+ + Y + I DV DQ+ T Sbjct: 80 AQLMSAFSYYMNKDYPESIGASQRFLSIHTGNKDAPYAYYLIALCYYEQIADVTRDQKVT 139 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + L + ++ RY ++ Y AR + + + LA KE+EIGR+Y +RG+++AA RF+ Sbjct: 140 QQALDALGELIRRYPDTRYAADARLKLDLVNDHLAGKEMEIGRFYQRRGQWLAATLRFRT 199 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 V+ Y H EA+ RLVE+Y++L + EA++ +++ YP W L++ Sbjct: 200 VIDKYQTTTHTPEALERLVESYLSLGIPAEAQKAAAVLGRNYPGSKWYERSHKLMR 255 >gi|254460220|ref|ZP_05073636.1| competence lipoprotein ComL [Rhodobacterales bacterium HTCC2083] gi|206676809|gb|EDZ41296.1| competence lipoprotein ComL [Rhodobacteraceae bacterium HTCC2083] Length = 289 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 73/261 (27%), Positives = 126/261 (48%), Gaps = 1/261 (0%) Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLK 69 + A + ++A C G S ++ D ++YE+ L+ Sbjct: 1 MKRKSVRHALTVATVLTLTVAGCSGGGGGGVSRFLGGKSTIPLDTFTAEQIYERGEFELE 60 Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + A YF + R +P++ A++ L+M AF + Y+ + + + +I YP + Sbjct: 61 RKRDDDAAFYFGEVERLYPYSEWAKRGLIMQAFAYHKDKDYENSRASAQRFIDVYPTDDD 120 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 Y YL+ +SY I D+ DQ T LQ + ++ERY +S Y A + + L Sbjct: 121 AAYAQYLLALSYYDQIEDLGRDQGLTFQALQGLRTVIERYPDSEYTSSAILKFDLAFDHL 180 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A KE+EIGRYYL+R Y ++I RF++V+ ++ H EA+ RLVE+Y++L L +EA+ Sbjct: 181 AGKEMEIGRYYLRRDHYTSSINRFRVVVEDFQTTTHTPEALHRLVESYLSLGLNEEAQTA 240 Query: 250 VSLIQERYPQGYWARYVETLV 270 +++ Y W L+ Sbjct: 241 GAILGHNYKSTEWYEDSFKLL 261 >gi|15965919|ref|NP_386272.1| hypothetical protein SMc01876 [Sinorhizobium meliloti 1021] gi|307308229|ref|ZP_07587938.1| outer membrane assembly lipoprotein YfiO [Sinorhizobium meliloti BL225C] gi|307319696|ref|ZP_07599121.1| outer membrane assembly lipoprotein YfiO [Sinorhizobium meliloti AK83] gi|15075188|emb|CAC46745.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021] gi|306894627|gb|EFN25388.1| outer membrane assembly lipoprotein YfiO [Sinorhizobium meliloti AK83] gi|306901227|gb|EFN31833.1| outer membrane assembly lipoprotein YfiO [Sinorhizobium meliloti BL225C] Length = 288 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 78/240 (32%), Positives = 126/240 (52%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 L+ + + +Y + + L ++A F + PF+ Sbjct: 25 GSSLITACQNDPDIDITKLTAETDPPDVLYNQGLANLNAGKTTEAARKFEAIDKQHPFSE 84 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 ARK+L+M+AFV Y G+YQ A + Y+ YP+S++ Y Y+ G++Y + I V D Sbjct: 85 YARKALVMNAFVAYRNGQYQDAINSTNRYLNLYPQSEDAAYAQYIQGLAYTKQIPSVTQD 144 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 QR ++ M +V++Y +S YV A+ + R+QLA KE+++GRYYL+R EY+AAI Sbjct: 145 QRPAAKAIEAMQVVVDKYPDSEYVDDAQAKIRFARDQLAGKEMQVGRYYLERKEYLAAIS 204 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 RF+ V+ Y EEA+ARLVEAY A+ + EA+ +++ YP W L++ Sbjct: 205 RFRTVVERYPTTNQVEEALARLVEAYYAMGVTGEAQTAAAVLGHNYPDSQWYADSYKLLQ 264 >gi|329902612|ref|ZP_08273173.1| putative component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Oxalobacteraceae bacterium IMCC9480] gi|327548720|gb|EGF33363.1| putative component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Oxalobacteraceae bacterium IMCC9480] Length = 265 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 62/258 (24%), Positives = 114/258 (44%), Gaps = 20/258 (7%) Query: 18 QLYKFA-LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 +L K A L + F+I+ C L+ + +++ ++Y +A + N+ Sbjct: 4 KLLKCAALALVFTISACGLLPEKIDETKN---------WSAAKLYAEARDEISTGNYETG 54 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 +Y+ + +PF A+++ + A+ Y QA + E +I +P NVDY+YYL Sbjct: 55 IKYYERLESRYPFGTFAQQAQMEVAYAYYRQSDQAQALAAVERFIKLHPNHPNVDYMYYL 114 Query: 137 VGMSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 G+ D +A + ++VER+ +S Y AR + Sbjct: 115 RGLINFNDKLGLFDFVSRQDATERDPKAAHEAFESFKQLVERFPDSIYAADARLRMKYLV 174 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 N +A EV + YY +RG YVAA+ R Q + Y A EEA+ + +Y L + + Sbjct: 175 NAIAQHEVHVANYYFRRGAYVAAVNRAQFAVKEYPTAPATEEALFVMTRSYDELGMPELR 234 Query: 247 REVVSLIQERYPQGYWAR 264 + ++++ +P + R Sbjct: 235 DDAGRVMKQNFPNSVYYR 252 >gi|150397273|ref|YP_001327740.1| hypothetical protein Smed_2072 [Sinorhizobium medicae WSM419] gi|150028788|gb|ABR60905.1| conserved hypothetical transmembrane protein [Sinorhizobium medicae WSM419] Length = 288 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 78/240 (32%), Positives = 126/240 (52%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 L+ + + +Y + + L ++A F + PF+ Sbjct: 25 GSSLITACQNDPDIDITKLTAETDPPEVLYNQGLANLNAGKTTEAARKFEAIDKQHPFSE 84 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 ARK+L+M+AFV Y G+YQ A + Y+ YP+S++ Y Y+ G++Y + I V D Sbjct: 85 YARKALVMNAFVSYRNGQYQDAINSTNRYLNLYPQSEDAAYAQYIQGLAYTKQIPSVTQD 144 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 QR ++ M +V++Y +S YV A+ + R+QLA KE+++GRYYL+R EY+AAI Sbjct: 145 QRPAMRAMEAMQVVVDKYPDSEYVDDAQAKIRFARDQLAGKEMQVGRYYLERKEYLAAIS 204 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 RF+ V+ Y EEA+ARLVEAY A+ + EA+ +++ YP W L++ Sbjct: 205 RFRTVVERYPTTNQVEEALARLVEAYYAMGVTGEAQTAAAVLGHNYPDSQWYADSYKLLQ 264 >gi|307944886|ref|ZP_07660223.1| lipoprotein [Roseibium sp. TrichSKD4] gi|307771810|gb|EFO31034.1| lipoprotein [Roseibium sp. TrichSKD4] Length = 288 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 79/252 (31%), Positives = 131/252 (51%), Gaps = 8/252 (3%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 L ALTI +A C SS D D +Y + + + A Sbjct: 20 LKIMALTIPLGLAAC--------SSTKDTEDFALDDTPPEVLYNEGLALRAQGKLKDADA 71 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F Q + +P++ A+KSL+ A++ YS GKY +A + + ++T YP + + Y Y++G Sbjct: 72 KFQQLDKLYPYSEYAKKSLVNMAYINYSRGKYPEAINAAQRFVTLYPGNDDSAYALYIIG 131 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 SY + + D+ DQ T+ S +++RY +S Y A + ++QLA KE+++GR Sbjct: 132 QSYFKQMPDISRDQAVTRKAASAYSELLQRYPDSEYSPDAETKLIAVKDQLAGKEMQVGR 191 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYLK+ Y+A I RF+ V+ Y H EEA+ RL EAY AL +++EA+ +++ +P Sbjct: 192 YYLKKRNYIAGINRFKTVVLQYQTTRHVEEALFRLTEAYFALGVVNEAQTAAAVLGHNFP 251 Query: 259 QGYWARYVETLV 270 W + +L+ Sbjct: 252 DTQWYKDAYSLL 263 >gi|332141866|ref|YP_004427604.1| Competence lipoprotein ComL [Alteromonas macleodii str. 'Deep ecotype'] gi|327551888|gb|AEA98606.1| Competence lipoprotein ComL [Alteromonas macleodii str. 'Deep ecotype'] Length = 254 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 115/254 (45%), Gaps = 12/254 (4%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + F L + +V SS D +V +++Y++A ++ NFS A + Sbjct: 1 MKSFRLLAPVLLGA--MVSVAGCSSSDKEEKAVLANMGAQQLYDRAKQSMEVGNFSAAAQ 58 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + +PF ++ + L + Y +GK ++ + + +I P +VDY YY+ G Sbjct: 59 TLSALDSRYPFGPLSHQVQLDLIYSYYKSGKNEETLATIDRFIRLNPNHSDVDYAYYMRG 118 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + I D ++ + R++++Y +S Y A+ + +++ Sbjct: 119 LTNMESDSNLFQELMNIDRTDRDPSKSRQAFEDFRRLIQQYPDSKYAADAKQRMVHIKDR 178 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ I R+Y++R YVAA R + V+ ++ + ++A+ +V +Y L L + Sbjct: 179 LARYEIAIARFYMRRQAYVAAANRGRYVIEHFPNTTQVQQALEIMVSSYEQLGLKELRDN 238 Query: 249 VVSLIQERYPQGYW 262 + ++ YP + Sbjct: 239 AMKTLKLNYPDSEF 252 >gi|294011614|ref|YP_003545074.1| putative lipoprotein [Sphingobium japonicum UT26S] gi|292674944|dbj|BAI96462.1| putative lipoprotein [Sphingobium japonicum UT26S] Length = 261 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 68/236 (28%), Positives = 120/236 (50%), Gaps = 3/236 (1%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G ++ DV +Y L + A F++ R P++ AR+ Sbjct: 23 SGCATSKNKADTQYVARDVST---LYNAGKYRLDRGQYKLAAALFDEVERQHPYSPWARR 79 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + LMSAF Y Y ++ + +++ + +K+ Y YYL+ + Y + I DV DQ+ T Sbjct: 80 AQLMSAFSYYMNQDYPESIGAAQRFLSIHTGNKDAPYAYYLIALCYYEQIADVTRDQKIT 139 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + L + ++ RY ++ Y AR + + + LA KE+EIGR+Y +RG+++AA RF+ Sbjct: 140 QQALDALGELIRRYPDTRYAADARLKLDLVNDHLAGKEMEIGRFYQRRGQWLAATLRFRT 199 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 V+ Y H EA+ RLVE+Y++L + EA++ +++ YP W L++ Sbjct: 200 VIDKYQTTTHTPEALERLVESYLSLGIPAEAQKAAAVLGRNYPGSKWYERSYKLMR 255 >gi|332307417|ref|YP_004435268.1| outer membrane assembly lipoprotein YfiO [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174746|gb|AEE24000.1| outer membrane assembly lipoprotein YfiO [Glaciecola agarilytica 4H-3-7+YE-5] Length = 255 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 14/255 (5%) Query: 19 LYKFALT-IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + K +L +F + A+ L G + V + R + +YE A + NF+ A Sbjct: 2 MRKLSLPKVFLAAAIIALGGCSSSLDEEEV---VVNNRSAQSLYEDAKEKMAIGNFNAAT 58 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + +PF ++ + L + Y +GK +A S + + P +VDY Y+ Sbjct: 59 ATLSALDSRYPFGPLSNQVQLDLIYAYYKSGKVNEAISTIDRFTRLNPNHADVDYAIYMR 118 Query: 138 GMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G++ + I D ++ + R++E++ +S Y A+ + ++ Sbjct: 119 GLTNMESDKNLFQELVGIDRSDRDPSKSREAFEDFRRLIEKFPDSKYAADAQKRMLHIKS 178 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 +LA E+ I R+Y++R YVAA R + VL Y D +H +EA+ +VE Y L L + Sbjct: 179 RLAKYEIAIARFYMRREAYVAAANRGRYVLEYYPDTDHVQEALEIMVECYDQLKLDELKN 238 Query: 248 EVVSLIQERYPQGYW 262 V+ ++ YP + Sbjct: 239 NVMKTLKLNYPDSSF 253 >gi|212636675|ref|YP_002313200.1| hypothetical protein swp_3941 [Shewanella piezotolerans WP3] gi|212558159|gb|ACJ30613.1| Conserved hypothetical protein [Shewanella piezotolerans WP3] Length = 276 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 59/271 (21%), Positives = 102/271 (37%), Gaps = 17/271 (6%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 M L + + +++ K + S+AV S D + Sbjct: 8 MEKFLTITLKESNSSMHKIAKSVAVVLISLAVTAC-------SSKQGEDPAMIKSSPEVL 60 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A ++ N+SKA FPF + L F Y + + + Sbjct: 61 YSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIFAYYKLDDPASGIANIDRF 120 Query: 121 ITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYT 170 I P K++DYVYY+ G+ Q I D +A + + R+V+ Y Sbjct: 121 IRLNPTHKDIDYVYYMRGLVNMQSDRYLFHDMLNIDRSDRDPKAAQDAFKDFDRLVKAYP 180 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 NS Y A+ + +N+LA +++ YY+K + AA R QLV+ + E A+ Sbjct: 181 NSKYAADAQKRMQHLKNRLALYSIKVAEYYIKMNAWSAAAIRAQLVMEGFPGTPSTERAL 240 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + +AY L + ++Q +P Sbjct: 241 EIMSQAYGELGQDKLKEHTLMVMQANFPDNK 271 >gi|300312308|ref|YP_003776400.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gi|300075093|gb|ADJ64492.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 266 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 60/255 (23%), Positives = 102/255 (40%), Gaps = 14/255 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 ++K L F L + T ++Y +A L + KA + Sbjct: 1 MHKILLKFFIIGFALSLTACGLLPEQKDE----TTGWSAAKLYSEAKDELNAGGYDKAIK 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 YF + +PF A+++ + A+ Y + Q + + +I +P NVDY+YYL G Sbjct: 57 YFEKLESRYPFGTYAQQAQMDIAYAYYRQNEQAQGLAAVDRFIKLHPNHPNVDYMYYLRG 116 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + D +A + + ER+ +S Y A + N Sbjct: 117 LINFNDRTSIFDTFTDQDNTERDPKAMRDAFDSFKLLAERFPDSKYTPDAIARMKYLVNA 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 ++ +V + YY +RG YV+A R Q + Y D+ EEA+ L+ +Y AL + Sbjct: 177 MSQYDVHVASYYFRRGAYVSAANRAQSAIKQYPDSPANEEALFILMRSYEALGQTKLKED 236 Query: 249 VVSLIQERYPQGYWA 263 +IQ YP W Sbjct: 237 TERIIQATYPNSPWY 251 >gi|109897659|ref|YP_660914.1| putative lipoprotein [Pseudoalteromonas atlantica T6c] gi|109699940|gb|ABG39860.1| putative lipoprotein [Pseudoalteromonas atlantica T6c] Length = 255 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 14/255 (5%) Query: 19 LYKFALT-IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + K +L IF + A+ L G + V + R + +YE A + NF+ A Sbjct: 2 MRKLSLPKIFLAAAIIALGGCSSSPDEEEV---VVNNRSAQSLYEDAKEKMAIGNFNAAT 58 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + +PF ++ + L + Y +GK +A S + + P +VDY Y+ Sbjct: 59 ATLSALDSRYPFGPLSNQVQLDLIYAYYKSGKVNEAISTIDRFTRLNPNHADVDYAIYMR 118 Query: 138 GMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G++ + I D ++ + R++++Y +S Y A+ + ++ Sbjct: 119 GLTNMESDKNLFQELVGIDRSDRDPSKSREAFEDFRRLIDKYPDSKYAADAQKRMLHIKS 178 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 +LA E+ I R+Y++R +VAA R + VL Y D +H +EA+ +VE Y L L + Sbjct: 179 RLAKYEIAIARFYMRREAFVAAANRGRYVLEYYPDTDHVQEALEIMVECYDQLKLDELKN 238 Query: 248 EVVSLIQERYPQGYW 262 V+ ++ YP + Sbjct: 239 NVMKTLKLNYPDSSF 253 >gi|167625161|ref|YP_001675455.1| putative lipoprotein [Shewanella halifaxensis HAW-EB4] gi|167355183|gb|ABZ77796.1| putative lipoprotein [Shewanella halifaxensis HAW-EB4] Length = 268 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 104/270 (38%), Gaps = 17/270 (6%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 M L + + +++ K + ++A SS+ +T + Sbjct: 1 MEKFLTITLKESNSSMHKIAKSVAVVLITLAATAC------SSKKGEDPQMTK-SSPEVL 53 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A ++ N+SKA FPF + L + Y + + + Sbjct: 54 YSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRF 113 Query: 121 ITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYT 170 I P K++DYVYY+ G+ Q I D +A + + R+++ Y Sbjct: 114 IRLNPTHKDIDYVYYMRGLVNMQSDRYLFHDMLNIDRSDRDPKAAQDAFKDFDRLIKSYP 173 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 NS Y A+ + +N+LA +++ YY+K + AA R Q VL Y AE+A+ Sbjct: 174 NSKYAADAQKRMQHLKNRLALYSIKVAEYYIKMNAWSAAAVRAQSVLETYPGTPSAEKAL 233 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQG 260 + AY L + +++ +P Sbjct: 234 EIMSTAYGELGQEKLKDHALMVMKANFPNN 263 >gi|239996650|ref|ZP_04717174.1| Competence lipoprotein ComL [Alteromonas macleodii ATCC 27126] Length = 254 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 116/255 (45%), Gaps = 14/255 (5%) Query: 19 LYKFALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + F L + A+ + G + + +V +++Y++A ++ NFS A Sbjct: 1 MKSFRLLAPVLLGAMVSVAGCSSSDNEE---KAVLANMGAQQLYDRAKQSMEVGNFSAAA 57 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + + +PF ++ + L + Y +GK ++ + + +I P +VDY YY+ Sbjct: 58 QTLSALDSRYPFGPLSHQVQLDLIYSYYKSGKNEETLATIDRFIRLNPNHSDVDYAYYMR 117 Query: 138 GMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G++ + I D ++ + R++++Y +S Y A+ + ++ Sbjct: 118 GLTNMESDSNLFQELMNIDRTDRDPSKSRAAFEDFRRLIQQYPDSKYAADAKQRMVHIKD 177 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 +LA E+ I R+Y++R YVAA R + V+ ++ + ++A+ +V +Y L L + Sbjct: 178 RLARYEIAIARFYMRRQAYVAAANRGRYVIEHFPNTTQVQQALEIMVSSYEQLGLDELRN 237 Query: 248 EVVSLIQERYPQGYW 262 + ++ YP + Sbjct: 238 NAMKTLKLNYPDSEF 252 >gi|221135102|ref|ZP_03561405.1| Competence lipoprotein ComL [Glaciecola sp. HTCC2999] Length = 252 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 109/252 (43%), Gaps = 13/252 (5%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K L I + L G + + +++ + +Y KA ++ NF A E Sbjct: 2 KIRLYALSLIGLIALGGCSSAPEKAI---EEVELQGPQAIYAKAKTAMENGNFGGAAEIL 58 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + +PF ++ + L + Y +G QA + + +I P K++DY Y++ G++ Sbjct: 59 SDLDSRYPFGELSHQVQLDLIYSYYKSGDSAQALATIDRFIRLNPNHKDIDYAYFMRGLT 118 Query: 141 YAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 +M I D A++ ++++ + S Y A+ + + +LA Sbjct: 119 NMEMDDNLFQSLFNIDRSDRDPSASREAFNDFRQLLDTFPESKYATDAQKRMVYIKTRLA 178 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 E+ I R+Y++R YVAA R Q VL Y D +EA+ +V Y L L + Sbjct: 179 KYEIAIARFYMRREAYVAAANRGQYVLEYYPDTGMVQEALEIMVSCYDQLGLDQLKANAI 238 Query: 251 SLIQERYPQGYW 262 +++ YP+ + Sbjct: 239 KILKLNYPESEF 250 >gi|84501764|ref|ZP_00999936.1| Putative ComL lipoprotein [Oceanicola batsensis HTCC2597] gi|84390385|gb|EAQ02944.1| Putative ComL lipoprotein [Oceanicola batsensis HTCC2597] Length = 267 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 74/238 (31%), Positives = 125/238 (52%), Gaps = 1/238 (0%) Query: 34 FLVGWERQSSRDVYLD-SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 L G S+ + + + ++Y++ L ++ A EYF + R +P++ Sbjct: 2 ALAGCGGTSTDGLGMGGQPIESFTAEQIYQRGEYELDSSDYDSAAEYFGEVERLYPYSEW 61 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A+++L+M AF + Y+++ + + +I YP + Y YL+ +SY I +V DQ Sbjct: 62 AKRALIMQAFSFHKDKNYEESRASAQRFIDFYPTDDDAAYAQYLLALSYYDQIDEVGRDQ 121 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 T LQ + ++ERY S Y + A + + LAAKE+EIGRYYLKR + AAI R Sbjct: 122 GLTFQALQSLRTVIERYPESDYARSAILKFDLAFDHLAAKEMEIGRYYLKRDHFPAAINR 181 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 F++V+ ++ H EA+ RLVEAY++L L DEA+ +++ + W L+ Sbjct: 182 FRVVVEDFQTTTHTAEALHRLVEAYLSLGLTDEAQTAGAILGHNFQSTEWYEDSYRLL 239 >gi|56552654|ref|YP_163493.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp. mobilis ZM4] gi|4378163|gb|AAD19408.1| unknown [Zymomonas mobilis subsp. mobilis ZM4] gi|56544228|gb|AAV90382.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp. mobilis ZM4] Length = 346 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 73/254 (28%), Positives = 127/254 (50%), Gaps = 2/254 (0%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + + + +IA+ + G + + D+ R +Y L + A Sbjct: 4 KFSRSLVIALTAIAILPMAGCAGRGKKKT--DTRYVARDVDTLYNAGKQSLDSGQYKAAA 61 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 +F++ R P++ AR++ LMSAF Y A Y + + + +++ + +K+ Y YLV Sbjct: 62 AFFDEVERQHPYSIWARRAQLMSAFCNYRARNYSASIASAQRFLSIHTGNKDAPYAMYLV 121 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 M Y + I+DV +DQ T+L L M+ I+ RY ++PY AR + + + L KE+ IG Sbjct: 122 MMDYYEQIQDVNHDQHTTQLALDSMNDIIRRYPDTPYAADARLKMDLVHDHLGGKEMAIG 181 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 R+Y + ++AA RF+ V+ Y + EA+ RL E+Y+AL L EAR +++ + Sbjct: 182 RFYEQSRLWLAATLRFRRVIDEYQTTTYVPEALERLTESYLALGLRAEARNAAAVLGANF 241 Query: 258 PQGYWARYVETLVK 271 P W L+K Sbjct: 242 PGSKWYSRAYHLIK 255 >gi|313496997|gb|ADR58363.1| DNA uptake lipoprotein-like protein [Pseudomonas putida BIRD-1] Length = 339 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 13/241 (5%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 + + L SS +D + + E+Y++A L +++ A +P Sbjct: 6 LLLIAILGLTAACSSNKEVID---ENLSEAELYQQAQADLDNSSYTSAVNKLKALESRYP 62 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 F A ++ L + Y + + A S E +I +P+ NVDY YYL G++ R + Sbjct: 63 FGRYADQAQLELIYANYKNSEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDRGL 122 Query: 149 ----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D A + +++ R+ NS Y A+ + RN LA+ E+ + Sbjct: 123 LARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVAD 182 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYL R YVAA R + V+ N+ + + +A +VE+Y L L + A + ++ YP Sbjct: 183 YYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQKLHLDELAATSLETLKLNYP 242 Query: 259 Q 259 Sbjct: 243 D 243 >gi|114705261|ref|ZP_01438169.1| hypothetical protein FP2506_09991 [Fulvimarina pelagi HTCC2506] gi|114540046|gb|EAU43166.1| hypothetical protein FP2506_09991 [Fulvimarina pelagi HTCC2506] Length = 265 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 83/253 (32%), Positives = 135/253 (53%), Gaps = 1/253 (0%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDV-YLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + K +LT+ + G DV L +Y + + L+ N +A Sbjct: 9 MRKASLTVLVAATAGLASGCMSDGGSDVDVLALAAQTERPEVLYNQGLANLEGGNLGEAS 68 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 F R P+ ARK+L+M AF Y +G Y++A + + Y++ YP +++ Y Y++ Sbjct: 69 AKFKAIDRQHPYTDWARKALVMGAFTSYRSGAYEEAINSSKRYLSLYPGTEDAAYAQYIM 128 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 G+SY + I D+ DQ A Q M +++ Y +S YV A+ + + R+QLA KE+++G Sbjct: 129 GLSYWRQIPDITRDQTAAGRTAQAMRGVIDNYPDSEYVPDAQTKLRIARDQLAGKELQVG 188 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 RYY +R EYVAAI RF+ V+ Y + EEA+ARL E Y+A+ L+ EA+ S++ + Y Sbjct: 189 RYYQERNEYVAAINRFKNVVDVYPETRQVEEALARLTETYLAMGLVREAQASASVLGQNY 248 Query: 258 PQGYWARYVETLV 270 P W + L+ Sbjct: 249 PDSQWYQDSYALL 261 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 41/150 (27%), Gaps = 32/150 (21%) Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 V Y G++ + I ++ + + + A Sbjct: 48 PEVLYNQGLANLEG--------GNLGEASAKFKAIDRQHPYTDWARKALVMGAFTS---- 95 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY---------VALA 241 + G Y AI + L+ Y E A A + +Y A Sbjct: 96 ----------YRSGAYEEAINSSKRYLSLYPGTEDAAYAQYIMGLSYWRQIPDITRDQTA 145 Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271 A+ + +I YP + +T ++ Sbjct: 146 AGRTAQAMRGVID-NYPDSEYVPDAQTKLR 174 >gi|26987359|ref|NP_742784.1| competence lipoprotein ComL, putative [Pseudomonas putida KT2440] gi|24982012|gb|AAN66248.1|AE016253_3 competence lipoprotein ComL, putative [Pseudomonas putida KT2440] Length = 339 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 13/241 (5%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 + + L SS +D + + E+Y++A L +++ A +P Sbjct: 6 LLLIAILGLTAACSSNKEVID---ENLSEAELYQQAQADLDNSSYTSAVNKLKALESRYP 62 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 F A ++ L + Y + + A S E +I +P+ NVDY YYL G++ R + Sbjct: 63 FGRYADQAQLELIYANYKNSEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDRGL 122 Query: 149 ----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D A + +++ R+ NS Y A+ + RN LA+ E+ + Sbjct: 123 LARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVAD 182 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYL R YVAA R + V+ N+ + + +A +VE+Y L L + A + ++ YP Sbjct: 183 YYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQKLHLDELAATSLETLKLNYP 242 Query: 259 Q 259 Sbjct: 243 D 243 >gi|86358441|ref|YP_470333.1| hypothetical protein RHE_CH02838 [Rhizobium etli CFN 42] gi|86282543|gb|ABC91606.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 289 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 91/257 (35%), Positives = 150/257 (58%), Gaps = 5/257 (1%) Query: 19 LYKFALTIFFSI----AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74 + K A +F S+ A + G + D+ + +Y + + +K N + Sbjct: 9 MMKTARALFASLLVLSAGASISGCQSDPDIDIT-KLGLETDPPDVLYTQGLANMKAGNMA 67 Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 +A F+ R+ PF+ ARK+L+MS FV+Y GK A + G Y++QYP+S++ YV Sbjct: 68 EAARKFDAIDRENPFSEWARKALVMSTFVKYRQGKLDDALASGNRYMSQYPKSQDAAYVQ 127 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 YL+G++Y++ I DV DQRA+ ++ M +++ Y NS YV A+ + R+QLA KE+ Sbjct: 128 YLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQAKIRFARDQLAGKEM 187 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 ++GRYY++R EY+AAI RF++V+ Y + EEA+ARLVEAY A+ ++DEA+ +++ Sbjct: 188 QVGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLG 247 Query: 255 ERYPQGYWARYVETLVK 271 YP W L++ Sbjct: 248 HNYPDSQWYADSYKLLQ 264 >gi|241762104|ref|ZP_04760187.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373354|gb|EER62954.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 346 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 72/254 (28%), Positives = 127/254 (50%), Gaps = 2/254 (0%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + + + +IA+ + G + + D+ R +Y L + A Sbjct: 4 KFSRSLVIALTAIAILPMAGCAGRGKKKT--DTRYVARDVDTLYNAGKQSLDSGQYKAAA 61 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 +F++ R P++ AR++ LMSAF Y A Y + + + +++ + +K+ Y YLV Sbjct: 62 AFFDEVERQHPYSIWARRAQLMSAFCNYRARNYSASIASAQRFLSIHTGNKDAPYAMYLV 121 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 M Y + I+DV +DQ T+L L M+ I+ RY ++PY AR + + + L KE+ IG Sbjct: 122 MMDYYEQIQDVNHDQHTTQLALDSMNDIIRRYPDTPYAADARLKMDLVHDHLGGKEMAIG 181 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 R+Y + ++AA RF+ V+ Y + EA+ RL E+Y+A+ L EAR +++ + Sbjct: 182 RFYEQSRLWLAATLRFRRVIDEYQTTTYVPEALERLTESYLAMGLRVEARNAAAVLGANF 241 Query: 258 PQGYWARYVETLVK 271 P W L+K Sbjct: 242 PGSKWYSRAYHLIK 255 >gi|298293090|ref|YP_003695029.1| outer membrane assembly lipoprotein YfiO [Starkeya novella DSM 506] gi|296929601|gb|ADH90410.1| outer membrane assembly lipoprotein YfiO [Starkeya novella DSM 506] Length = 305 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 72/251 (28%), Positives = 127/251 (50%), Gaps = 4/251 (1%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + A + ++ W S+ V + Y + + + + +++A + F Sbjct: 35 RLAGLVMLGASLGGCASWFDTSTEAKVYPDVP----AEQRYNEGLTLMAKDEYAEAIKRF 90 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 R P++ ARK++LM A++ Y+ Y ++ S Y+ +P S + Y YL+ S Sbjct: 91 EDVDRQHPYSEWARKAVLMIAYINYAQANYDESISAARRYLALHPGSADAAYAQYLIAAS 150 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 Y I D+ DQ T+ ++ + +V ++ N+ Y A+ + V R+QLA KE+ IGRYY Sbjct: 151 YFDQIPDISRDQARTERAMEALDEVVRKFPNTEYAVSAKKKLEVARDQLAGKEMMIGRYY 210 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L + Y AI RF++V+ Y H EEA+ RL EAY+AL ++ EA+ +++ +P Sbjct: 211 LDQRNYAGAINRFKVVVTRYQTTRHVEEALYRLTEAYMALGVVGEAQTSAAVLGYNFPDS 270 Query: 261 YWARYVETLVK 271 W + LV+ Sbjct: 271 TWYKDAYKLVQ 281 >gi|148545912|ref|YP_001266014.1| DNA uptake lipoprotein-like protein [Pseudomonas putida F1] gi|148509970|gb|ABQ76830.1| DNA uptake lipoprotein-like protein [Pseudomonas putida F1] Length = 339 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 13/241 (5%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 + + L SS +D + + E+Y++A L +++ A +P Sbjct: 6 LLLIAILGLTAACSSNKEVID---ENLSEAELYQQAQADLDNSSYTSAVNKLKALESRYP 62 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 F A ++ L + Y + + A S E +I +P+ NVDY YYL G++ R + Sbjct: 63 FGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDRGL 122 Query: 149 ----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D A + +++ R+ NS Y A+ + RN LA+ E+ + Sbjct: 123 LARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVAD 182 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYL R YVAA R + V+ N+ + + +A +VE+Y L L + A + ++ YP Sbjct: 183 YYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQKLHLDELAATSLETLKLNYP 242 Query: 259 Q 259 Sbjct: 243 D 243 >gi|116253037|ref|YP_768875.1| competence lipoprotein ComL protein [Rhizobium leguminosarum bv. viciae 3841] gi|115257685|emb|CAK08783.1| putative competence lipoprotein ComL protein [Rhizobium leguminosarum bv. viciae 3841] Length = 289 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 91/257 (35%), Positives = 150/257 (58%), Gaps = 5/257 (1%) Query: 19 LYKFALTIFFSI----AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74 + K A +F S+ A + G + D+ + +Y + + +K N + Sbjct: 9 MMKTARALFASLLVLSAGALISGCQSDPDIDIT-KLGLETDPPDVLYTQGLANMKAGNMA 67 Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 +A F+ R+ PF+ ARK+L+MS FV+Y G+ A + G Y++QYP+S++ YV Sbjct: 68 EAARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALASGNRYMSQYPKSQDAAYVQ 127 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 YL+G++Y++ I DV DQRA+ ++ M +++ Y NS YV A+ + R+QLA KE+ Sbjct: 128 YLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQAKIRFSRDQLAGKEM 187 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +IGRYY++R EY+AAI RF++V+ Y + EEA+ARLVEAY A+ ++DEA+ +++ Sbjct: 188 QIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLG 247 Query: 255 ERYPQGYWARYVETLVK 271 YP W L++ Sbjct: 248 HNYPDSQWYADSYKLLQ 264 >gi|159185041|ref|NP_355049.2| hypothetical protein Atu2084 [Agrobacterium tumefaciens str. C58] gi|159140315|gb|AAK87834.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 288 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 79/253 (31%), Positives = 139/253 (54%), Gaps = 1/253 (0%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + A+++ A + + D+ V + +Y++ + + N ++A Sbjct: 13 MRGIAVSLMLVGASVVVTACQSDPDIDITKLGV-ETDPPDVLYKQGLANMNAGNMTEASR 71 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F + +PF +K+L+M F+ K A + G ++ QYP SK+ YV Y++G Sbjct: 72 KFEAIDKQYPFTEWGQKALVMQTFIATRTNKNDVAITSGSRFLRQYPRSKDAAYVQYMIG 131 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 ++Y++ I DV DQRA + ++ M+++V Y +S YV A+ + R+QLA +E+++GR Sbjct: 132 LAYSKQISDVTQDQRAAQRTIEAMNKVVNDYPSSEYVADAQAKIRFARDQLAGREMQVGR 191 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYL+R EY+AA+ RF++V+ Y + EEA+ARL EAY A+ L+DEA+ +++ YP Sbjct: 192 YYLERKEYLAAVSRFRIVVEQYQNTNQIEEALARLTEAYYAMGLVDEAQTAAAVLGNNYP 251 Query: 259 QGYWARYVETLVK 271 W L+K Sbjct: 252 DSQWYADSYKLLK 264 >gi|75675253|ref|YP_317674.1| putative lipoprotein [Nitrobacter winogradskyi Nb-255] gi|74420123|gb|ABA04322.1| putative lipoprotein [Nitrobacter winogradskyi Nb-255] Length = 298 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 75/237 (31%), Positives = 126/237 (53%), Gaps = 6/237 (2%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY-EYFNQCSRDFPFAGVA 93 L+ + + D D ++Y + + + +Q KA + F++ R+ P++ A Sbjct: 42 LLDKFTAKDEETFSDEPAD-----KLYNEGLFLMNKQRDLKAVTKKFDEVDREHPYSEWA 96 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 RKSLLMSA+ Y AG Y Y+T +P S + Y YL+ +S I DV DQ Sbjct: 97 RKSLLMSAYASYQAGDYDTCIGSASRYVTLHPGSPDAAYAQYLIAVSNYDQIADVSRDQA 156 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 T+ ++ + ++ +Y S Y A+ + R+QLA KE+ +GRYY++R +Y AI RF Sbjct: 157 RTEKAMRTLEEVIRKYPTSEYAGEAKKKLQGARDQLAGKEMAVGRYYMERRDYTGAINRF 216 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + V+ + H EEA+ARL EAY+A+ ++ EA+ +++ +P +W + LV Sbjct: 217 KTVVTRFQTTRHVEEALARLTEAYMAIGIVAEAQTAAAVLGHNFPDSHWYKDAYNLV 273 >gi|226943323|ref|YP_002798396.1| competence protein ComL [Azotobacter vinelandii DJ] gi|226718250|gb|ACO77421.1| competence protein ComL [Azotobacter vinelandii DJ] Length = 337 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 59/244 (24%), Positives = 107/244 (43%), Gaps = 13/244 (5%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + ++ + + ++ +D + + E+Y++A L +NF A Sbjct: 6 LLLIASLVLIAACGSKKEKEEVVD---ENLSETELYQQAQNDLNNENFGSATTKLKALES 62 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +PF A ++ L + Y + + + S E +I +P+ NVDY YYL G++ Sbjct: 63 RYPFGRYAEQAQLELIYAYYKSQETDASRSAAERFIRLHPQHPNVDYAYYLKGLASFDQD 122 Query: 146 RDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 R + D A + +++ R+ NS Y A+ + RN LAA E+ Sbjct: 123 RGLLSRFLPLDMTKRDPGAARDSFNEFAQLTSRFPNSRYAPDAKARMVYLRNLLAAYEIH 182 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + YYLKR YVAA R + V+ N + + +A ++EAY + L + A + ++ Sbjct: 183 VAHYYLKREAYVAAANRGRYVVENLQETPAVGDGLAVMIEAYQRMTLDELATTSLETLKL 242 Query: 256 RYPQ 259 YP Sbjct: 243 NYPD 246 >gi|227822643|ref|YP_002826615.1| competence lipoprotein ComL [Sinorhizobium fredii NGR234] gi|227341644|gb|ACP25862.1| competence lipoprotein ComL [Sinorhizobium fredii NGR234] Length = 288 Score = 271 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 77/240 (32%), Positives = 130/240 (54%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 L+ + + +Y + + L ++A F+ R PF+ Sbjct: 25 GSSLITACQNDPDIDITKLTAETDPPEVLYNQGLANLNAGKTTEAGRKFDAIDRQHPFSE 84 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 ARK+L+M+AFV Y G+YQ A + Y+ YP+S++ Y Y+ G++Y + I V D Sbjct: 85 YARKALVMNAFVAYRNGQYQDAINSTNRYLNLYPQSEDAAYAQYIQGLAYTKQIPSVTQD 144 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q+ + ++ M +V++Y +S YV A+ + R+QLA KE+++GRYYL+R EY+AAI Sbjct: 145 QKPAQRAIEAMQVVVDKYPDSEYVDDAQSKIRFARDQLAGKEMQVGRYYLERKEYLAAIS 204 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 RF++V+ Y + EEA+ARLVEAY ++ + EA+ +++ YP W L++ Sbjct: 205 RFRVVVEQYPNTNQVEEALARLVEAYFSMGVTAEAQTAAAVLGHNYPDSQWYADSYKLLQ 264 >gi|260753695|ref|YP_003226588.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553058|gb|ACV76004.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 346 Score = 271 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 72/254 (28%), Positives = 127/254 (50%), Gaps = 2/254 (0%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + + + +IA+ + G + + D+ R +Y L + A Sbjct: 4 KFSRSLVIALTAIAILPMAGCAGRGKKKT--DTRYVARDVDTLYNAGKQSLDSGQYKAAA 61 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 +F++ R P++ AR++ LMSAF Y A Y + + + +++ + +K+ Y YLV Sbjct: 62 AFFDEVERQHPYSIWARRAQLMSAFCNYRARNYSASIASAQRFLSIHTGNKDAPYAMYLV 121 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 M Y + I+DV +DQ T+L L M+ I+ RY ++PY AR + + + L KE+ IG Sbjct: 122 MMDYYEQIQDVNHDQHTTQLALDSMNDIIRRYPDTPYAADARLKMDLVHDHLGGKEMAIG 181 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 R+Y + ++AA RF+ V+ Y + EA+ RL E+Y+A+ L EAR +++ + Sbjct: 182 RFYEQSRLWLAATLRFRRVIDEYQTTTYVPEALERLTESYLAMGLRVEARNAAAVLGANF 241 Query: 258 PQGYWARYVETLVK 271 P W L+K Sbjct: 242 PGSKWYSRAYHLIK 255 >gi|325273288|ref|ZP_08139565.1| competence lipoprotein ComL [Pseudomonas sp. TJI-51] gi|324101573|gb|EGB99142.1| competence lipoprotein ComL [Pseudomonas sp. TJI-51] Length = 339 Score = 271 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 105/241 (43%), Gaps = 13/241 (5%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 + + L SS +D + + E+Y++A L +++ A +P Sbjct: 6 LLLIAILGLTAACSSNKEVID---ENLSEAELYQQAQADLDNSSYTSAVNKLKALESRYP 62 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 F A ++ L + Y + + A S E +I +P+ NVDY YYL G++ R + Sbjct: 63 FGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDRGL 122 Query: 149 ----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D A + +++ R+ NS Y A+ + RN LA+ E+ + Sbjct: 123 LARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVAD 182 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYL R YVAA R + V+ N+ + + +A +VE+Y + L + A + ++ YP Sbjct: 183 YYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQKMHLDELAATSLETLKLNYP 242 Query: 259 Q 259 Sbjct: 243 D 243 >gi|327482284|gb|AEA85594.1| competence protein ComL [Pseudomonas stutzeri DSM 4166] Length = 329 Score = 271 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 17/244 (6%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + + D L V E+Y++A L ++++ A Sbjct: 6 LLLIAIFALTAACSSNETVDENLGEV-------ELYQQAQADLDNKSYTSAISKLKALES 58 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +PF A ++ L + Y + + A S E +I +P+ NVDY YYL G++ Sbjct: 59 RYPFGRFAEQAQLELIYAYYRNAEPEAARSAAERFIRLHPQHPNVDYAYYLKGLASFDQD 118 Query: 146 RDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 R + D A + +++ RY NS Y A+ + RN LAA E+ Sbjct: 119 RGLLARFLPLDMTKRDPGAARDSFNEFAQLTSRYPNSRYSPDAKARMIYLRNLLAANEIH 178 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + YYLKR YVAA R + V+ N+ + +A + EAY L L D A + +Q Sbjct: 179 VAHYYLKRQAYVAAANRGRYVVENFQGTPAVADGLAVMTEAYQRLGLDDLADASLKTLQL 238 Query: 256 RYPQ 259 YP Sbjct: 239 NYPD 242 >gi|163738728|ref|ZP_02146142.1| competence lipoprotein ComL, putative [Phaeobacter gallaeciensis BS107] gi|161388056|gb|EDQ12411.1| competence lipoprotein ComL, putative [Phaeobacter gallaeciensis BS107] Length = 282 Score = 271 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 72/252 (28%), Positives = 126/252 (50%), Gaps = 1/252 (0%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + A TI + V L G + ++YE+ ++ A Sbjct: 4 MGAAAKTIGAVLLVAALSGCGGDGGA-AKSSQPLEGFTPEQIYERGEFEMERNRTEDAAF 62 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 YF++ R +P++ A+++L+M A+ + Y+ + + + YI YP ++ Y YL+ Sbjct: 63 YFSEIERLYPYSSWAKQALIMQAYAYHLGRDYEDSRAAAQRYIDFYPTEEDAAYAQYLLA 122 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY I +V DQ T LQ + ++E Y +S Y A + + LA KE+EIGR Sbjct: 123 LSYYDQIDEVGRDQGLTFQALQSLRTVIEVYPDSEYASSAILKFDLAFDHLAGKEMEIGR 182 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYL++G Y +A+ RF++V+ ++ H EA+ RLVEAY++L L++EA+ +++ Y Sbjct: 183 YYLRKGHYTSAVNRFRVVVEDFQTTTHTAEALHRLVEAYLSLGLVNEAQTAGAILGHNYQ 242 Query: 259 QGYWARYVETLV 270 W L+ Sbjct: 243 STEWYEDSFKLL 254 >gi|254464035|ref|ZP_05077446.1| DNA uptake lipoprotein [Rhodobacterales bacterium Y4I] gi|206684943|gb|EDZ45425.1| DNA uptake lipoprotein [Rhodobacterales bacterium Y4I] Length = 282 Score = 271 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 75/248 (30%), Positives = 125/248 (50%), Gaps = 1/248 (0%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A T+ + + L G DSV + ++YE+ L + A YF + Sbjct: 8 ARTLGAVVLMAALAGCGGDGGAVKRGDSV-EAYSPDQIYERGEFELANRRPKDAVYYFAE 66 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 R +P++ A+++++M AF +S Y+ + + + +I YP ++ Y YL+ +SY Sbjct: 67 IERLYPYSEWAKQAVIMQAFAYHSTRDYENSRAAAQRFIDFYPADEDAAYAQYLLALSYY 126 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 I +V DQ T LQ + ++E Y +S Y A + + LA KE+EIGRYYL+ Sbjct: 127 DQIDEVGRDQGLTFQALQALRTVIEVYPDSQYATSAILKFDLAFDHLAGKEMEIGRYYLR 186 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 RG Y +AI RF++V+ + H EA+ RLVEAY++L L EA+ +++ + W Sbjct: 187 RGHYTSAINRFRVVVEEFQTTSHTPEALHRLVEAYLSLGLTAEAQTAAAILGHNFQSTEW 246 Query: 263 ARYVETLV 270 L+ Sbjct: 247 YEDSYRLL 254 >gi|104783635|ref|YP_610133.1| competence lipoprotein ComL [Pseudomonas entomophila L48] gi|95112622|emb|CAK17350.1| putative competence lipoprotein ComL [Pseudomonas entomophila L48] Length = 339 Score = 271 bits (694), Expect = 6e-71, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 105/241 (43%), Gaps = 13/241 (5%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 + + L SS +D + + E+Y++A L +++ A +P Sbjct: 6 LLLIAILGLTAACSSNKEVID---ENLSEAELYQQAQADLDNSSYTSAVNKLKALESRYP 62 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 F A ++ L + Y + + A S E +I +P+ NVDY YYL G++ R + Sbjct: 63 FGRYADQAQLELIYANYKNSEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDRGL 122 Query: 149 ----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D A + +++ R+ NS Y A+ + RN LA+ E+ + Sbjct: 123 LARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVAN 182 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYL R YVAA R + V+ N+ + + +A +VE+Y + L + A + ++ YP Sbjct: 183 YYLSREAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQHMHLDELAATSLETLKLNYP 242 Query: 259 Q 259 Sbjct: 243 D 243 >gi|190892573|ref|YP_001979115.1| competence lipoprotein protein [Rhizobium etli CIAT 652] gi|190697852|gb|ACE91937.1| competence lipoprotein protein [Rhizobium etli CIAT 652] gi|327194613|gb|EGE61463.1| competence lipoprotein protein [Rhizobium etli CNPAF512] Length = 289 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 94/257 (36%), Positives = 148/257 (57%), Gaps = 5/257 (1%) Query: 19 LYKFALTIFFSI----AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74 + K A +F S+ A + G + D+ + +Y + + +K N + Sbjct: 9 MMKTARALFASLLVLSAGASISGCQSDPDIDIT-KLGLETDPPDVLYTQGLANMKAGNMA 67 Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 +A F+ R+ PF+ ARK+L+MS FV+Y GK A + G Y+ QYP+S++ YV Sbjct: 68 EAARKFDAIDRENPFSEWARKALVMSTFVKYRQGKLDDALASGNRYMAQYPKSQDAAYVQ 127 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 YLVG++Y++ I DV DQRA ++ M +V+ Y NS YV A+ + R+QLA KE+ Sbjct: 128 YLVGLTYSKQIVDVTQDQRAAAKTIEAMQAVVDNYPNSEYVDDAQAKIRFARDQLAGKEM 187 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +IGRYY++R EY+AAI RF++V+ Y + EEA+ARLVEAY A+ ++DEA+ +++ Sbjct: 188 QIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLG 247 Query: 255 ERYPQGYWARYVETLVK 271 YP W L++ Sbjct: 248 HNYPDSQWYADSYKLLQ 264 >gi|158426191|ref|YP_001527483.1| putative lipoprotein precursor [Azorhizobium caulinodans ORS 571] gi|158333080|dbj|BAF90565.1| putative lipoprotein precursor [Azorhizobium caulinodans ORS 571] Length = 284 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 82/251 (32%), Positives = 130/251 (51%), Gaps = 6/251 (2%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + A + + L G D + ++Y + + L + + A + F Sbjct: 16 RAAALLGVVLVSATLAGCANDK------DVMAPDEPAEKIYNEGLTLLNKGDLDGAAKRF 69 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + P++ ARK+LLM +V Y AGKY A S G+ Y+ +P S++ YV YLV S Sbjct: 70 EDIDKTHPYSEWARKALLMDTYVYYEAGKYDDAISAGKRYLALHPGSQDAPYVSYLVASS 129 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 I D+ DQR T+ L + ++ +Y N+ Y GA+ V V R+QLA KE+ IGRYY Sbjct: 130 LYDSIPDISRDQRRTRQALDALDDVIRKYPNTEYAAGAKRKVEVARDQLAGKEMLIGRYY 189 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ Y AI RF++V+ Y EEA+ R+ EAY+AL +++EA+ +++ YP Sbjct: 190 LEQRNYTGAINRFKVVITQYQTTRQTEEALFRITEAYMALGIVNEAQTAAAVLGYNYPDS 249 Query: 261 YWARYVETLVK 271 W + LV+ Sbjct: 250 QWYKDAFKLVQ 260 >gi|121634500|ref|YP_974745.1| competence lipoprotein [Neisseria meningitidis FAM18] gi|218767825|ref|YP_002342337.1| competence lipoprotein [Neisseria meningitidis Z2491] gi|254804586|ref|YP_003082807.1| DNA uptake lipoprotein [Neisseria meningitidis alpha14] gi|18203141|sp|Q9JVB7|COML_NEIMA RecName: Full=Competence lipoprotein ComL; Flags: Precursor gi|120866206|emb|CAM09946.1| competence lipoprotein [Neisseria meningitidis FAM18] gi|121051833|emb|CAM08139.1| competence lipoprotein [Neisseria meningitidis Z2491] gi|254668129|emb|CBA04725.1| DNA uptake lipoprotein [Neisseria meningitidis alpha14] gi|254670507|emb|CBA06261.1| competence lipoprotein ComL [Neisseria meningitidis alpha153] gi|261392925|emb|CAX50510.1| competence lipoprotein ComL [Neisseria meningitidis 8013] gi|308388891|gb|ADO31211.1| competence lipoprotein [Neisseria meningitidis alpha710] gi|319410075|emb|CBY90409.1| competence lipoprotein ComL [Neisseria meningitidis WUE 2594] gi|325131844|gb|EGC54544.1| competence lipoprotein comL [Neisseria meningitidis M6190] gi|325136075|gb|EGC58685.1| competence lipoprotein comL [Neisseria meningitidis M0579] gi|325137894|gb|EGC60469.1| competence lipoprotein comL [Neisseria meningitidis ES14902] gi|325139919|gb|EGC62449.1| competence lipoprotein comL [Neisseria meningitidis CU385] gi|325141925|gb|EGC64365.1| competence lipoprotein comL [Neisseria meningitidis 961-5945] gi|325197922|gb|ADY93378.1| competence lipoprotein comL [Neisseria meningitidis G2136] gi|325202502|gb|ADY97956.1| competence lipoprotein comL [Neisseria meningitidis M01-240149] gi|325207747|gb|ADZ03199.1| competence lipoprotein comL [Neisseria meningitidis NZ-05/33] Length = 267 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 14/259 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K LT+ +A L Q + D +T ++Y +A L N+++A + Sbjct: 1 MKKILLTVSLGLA---LSACATQGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + FP + AR+S L +A+ Y + +A + E + +P+ N+DY YL G Sbjct: 57 LYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALYLRG 116 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + D +A + Q + +V+R+ NS Y A + + Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMVKLVDA 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A + Sbjct: 177 LGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 236 Query: 249 VVSLIQERYPQGYWARYVE 267 +++ +P+ + + Sbjct: 237 TRRVLETNFPKSPFLTHAW 255 >gi|170723709|ref|YP_001751397.1| competence lipoprotein ComL [Pseudomonas putida W619] gi|169761712|gb|ACA75028.1| competence lipoprotein ComL [Pseudomonas putida W619] Length = 339 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 13/241 (5%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 + + L SS +D + + E+Y++A L +++ A +P Sbjct: 6 LLLIAILGLTAACSSNKEVID---ENLSEAELYQQAQADLDNSSYNSAVNKLKALESRYP 62 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 F A ++ L + Y + + A S E +I +P+ NVDY YYL G++ R + Sbjct: 63 FGRYADQAQLELIYANYKNSEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDRGL 122 Query: 149 ----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D A + +++ R+ NS Y A+ + RN LA+ E+ + Sbjct: 123 VARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVAD 182 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYL R YVAA R + V+ N+ + + +A +VEAY + L D A + ++ YP Sbjct: 183 YYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVEAYQKMHLDDLAATSLETLKLNYP 242 Query: 259 Q 259 Sbjct: 243 D 243 >gi|283786207|ref|YP_003366072.1| lipoprotein [Citrobacter rodentium ICC168] gi|282949661|emb|CBG89280.1| putative lipoprotein [Citrobacter rodentium ICC168] Length = 245 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRGYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY KRG +VA + R + +L ++ D + +A+ + AY + + +A + Sbjct: 174 LAKYEYSVAEYYTKRGAWVAVVNRVEGMLRDFPDTQATRDALPLMENAYREMQMTTQAEK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|332992386|gb|AEF02441.1| Competence lipoprotein ComL [Alteromonas sp. SN2] Length = 255 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 113/250 (45%), Gaps = 12/250 (4%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 L A+ + G SS D +V +++Y +A ++ NFS A + Sbjct: 6 LLAPVLLGAMVSVAGCS--SSSDEEEKAVMANMGAQQLYNRAKQSMEVGNFSAAAQTLGA 63 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +PF ++ + L + Y +GK + + + +I P +VDY YY+ G++ Sbjct: 64 LDSRYPFGPLSHQVQLDLIYSYYKSGKSDETLATIDRFIRLNPNHSDVDYAYYMRGLTNM 123 Query: 143 QM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 + I D ++ + R++++Y +S Y AR + +++LA Sbjct: 124 ESDSNLFQDLMNIDRTDRDPSKSRQAFEDFRRLMQQYPDSKYAADARKRMLHIKDRLARY 183 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E+ I R+Y++R YVAA R + V+ ++ ++ ++A+ +V +Y L L D + Sbjct: 184 EIAIARFYMRRHAYVAAANRGRYVIEHFPESTQIQQALEIMVSSYEQLGLDDLRGNAMKT 243 Query: 253 IQERYPQGYW 262 ++ +P+ + Sbjct: 244 LKLNFPESDF 253 >gi|49474448|ref|YP_032490.1| competence lipoprotein comL precursor [Bartonella quintana str. Toulouse] gi|49239952|emb|CAF26357.1| Competence lipoprotein comL precursor [Bartonella quintana str. Toulouse] Length = 297 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 87/250 (34%), Positives = 132/250 (52%), Gaps = 1/250 (0%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDS-VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 L + + C L G + + + V + +Y +A+ L +A + F Sbjct: 22 LLGVVLLGSTCVLGGCLFKEKNTLDPSAYVLKIDPPDVLYNQALANLDSGRLGEASKKFL 81 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + + + RKSL+M AF Y KY +A S+ + YIT YP S + Y YY++G+S Sbjct: 82 TIEKQYAYTEWGRKSLVMGAFTNYQLAKYDEAISMAQRYITLYPGSDDSAYAYYIIGLSS 141 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 I DV DQR TK + M +VERY +S YVK A+ + +GR QLA KE+++GRYY Sbjct: 142 FCRIPDVTRDQRDTKRAIAAMQLLVERYPDSEYVKDAKAKIRIGREQLAGKEMQVGRYYE 201 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + Y+AA RF+ V+ YSD EEA+ RL E +AL L EA+ +++ YP+ Sbjct: 202 EGRRYLAASRRFRKVVEEYSDTNQIEEALFRLTEVNLALGLTAEAQTAAAILGRNYPKSE 261 Query: 262 WARYVETLVK 271 W ++ L+K Sbjct: 262 WYKFSYNLLK 271 >gi|254470086|ref|ZP_05083490.1| outer membrane assembly lipoprotein YfiO [Pseudovibrio sp. JE062] gi|211960397|gb|EEA95593.1| outer membrane assembly lipoprotein YfiO [Pseudovibrio sp. JE062] Length = 288 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 84/249 (33%), Positives = 136/249 (54%), Gaps = 8/249 (3%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 +L + +A C ++D D D ++ +A+ + S A + F + Sbjct: 24 SLALALVVAGCA--------TKDDVDDLALDETPAEVMFNEALALRASGDISGAAKKFYE 75 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 R +P++ ARKSL+ A++ + GKY +A + E + T YP +K+ Y +++G SY Sbjct: 76 LDRVYPYSEFARKSLINIAYLNFKMGKYPEAVAAAERFTTLYPGNKDSAYALFIIGESYF 135 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + I DV DQ T L M +V+RY +S Y K AR + +QLA KE+E+GRYYL Sbjct: 136 RQIPDVGRDQAVTAKALDAMREVVQRYPDSEYTKQARQRIRATEDQLAGKEMEVGRYYLA 195 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 R Y+A+I RF++V+ NY H EEA+ RL E+Y AL + +EA+ +++ +PQ W Sbjct: 196 RRNYLASINRFKVVVTNYQTTRHVEEALYRLTESYYALGVTNEAQTAAAVLGHNFPQSQW 255 Query: 263 ARYVETLVK 271 + +L+K Sbjct: 256 YQDAYSLLK 264 >gi|218659461|ref|ZP_03515391.1| hypothetical protein RetlI_07243 [Rhizobium etli IE4771] Length = 294 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 94/257 (36%), Positives = 150/257 (58%), Gaps = 5/257 (1%) Query: 19 LYKFALTIFFSI----AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74 + K A +F S+ A + G + D+ + +Y + + +K N + Sbjct: 14 MMKTARALFASLLVLSAGASISGCQSDPDIDIT-KLGLETDPPDVLYTQGLANMKAGNMA 72 Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 +A F+ R+ PF+ ARK+L+MS FV+Y GK+ A + G Y+ QYP+S++ YV Sbjct: 73 EAARKFDAIDRENPFSEWARKALVMSTFVKYRQGKFDDALASGNRYMAQYPKSQDAAYVQ 132 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 YLVG++Y++ I DV DQRA+ ++ M +V+ Y NS YV A+ + R+QLA KE+ Sbjct: 133 YLVGLTYSKQIVDVTQDQRASAKTIEAMQAVVDNYPNSEYVDDAQAKIRYARDQLAGKEM 192 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +IGRYY++R EY+AAI RF++V+ Y + EEA+ARLVEAY A+ ++DEA+ +++ Sbjct: 193 QIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLG 252 Query: 255 ERYPQGYWARYVETLVK 271 YP W L++ Sbjct: 253 HNYPDSQWYADSYKLLQ 269 >gi|241205546|ref|YP_002976642.1| outer membrane assembly lipoprotein YfiO [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859436|gb|ACS57103.1| outer membrane assembly lipoprotein YfiO [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 281 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 92/257 (35%), Positives = 150/257 (58%), Gaps = 5/257 (1%) Query: 19 LYKFALTIFFSI----AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74 + K A +F S+ A + G + D+ + +Y + + +K N + Sbjct: 1 MMKTARALFASLLVLSAGASISGCQSDPDIDIT-KLGLETDPPDVLYTQGLANMKAGNMA 59 Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 +A F+ R+ PF+ ARK+L+MS FV+Y G+ A + G Y++QYP+S++ YV Sbjct: 60 EAARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALASGNRYMSQYPKSQDAAYVQ 119 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 YL+G++Y++ I DV DQRA+ ++ M +++ Y NS YV A+ + R+QLA KE+ Sbjct: 120 YLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQAKIRFSRDQLAGKEM 179 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +IGRYYL+R EY+AAI RF++V+ Y + EEA+ARLVEAY A+ ++DEA+ +++ Sbjct: 180 QIGRYYLERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLG 239 Query: 255 ERYPQGYWARYVETLVK 271 YP W L++ Sbjct: 240 HNYPDSQWYADSYKLLQ 256 >gi|304387999|ref|ZP_07370171.1| competence lipoprotein ComL [Neisseria meningitidis ATCC 13091] gi|304337998|gb|EFM04136.1| competence lipoprotein ComL [Neisseria meningitidis ATCC 13091] Length = 267 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 14/259 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K LT+ +A L Q + D +T ++Y +A L N+++A + Sbjct: 1 MKKILLTVSLGLA---LSACATQGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + FP + AR+S L +A+ Y + +A + E + +P+ N+DY YL G Sbjct: 57 LYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALYLRG 116 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + D +A + Q + +V+R+ NS Y A + + Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMIKLVDA 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A + Sbjct: 177 LGGNEMSVARYYMKRGAYIAATNRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 236 Query: 249 VVSLIQERYPQGYWARYVE 267 +++ +P+ + + Sbjct: 237 TRRVLETNFPKSPFLTHAW 255 >gi|24375081|ref|NP_719124.1| hypothetical protein SO_3580 [Shewanella oneidensis MR-1] gi|24349840|gb|AAN56568.1|AE015795_2 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 268 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 60/271 (22%), Positives = 101/271 (37%), Gaps = 17/271 (6%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 M L + Y+ K + FS+A S + + E+ Sbjct: 1 MEKFLTTTYKELNSSMYKFSKGLTLVLFSLA-------LSACSSSPEDNDIAAKTSPDEL 53 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A ++ N+SKA FPF + L + Y + + + Sbjct: 54 YSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDRF 113 Query: 121 ITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYT 170 I P N+DYVYY+ G+ Q I D + + + R+++ Y Sbjct: 114 IRLNPTHPNIDYVYYMRGLVNMQADSYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTYP 173 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 NS Y A+ + +N+LA +++ YY+K + AA R Q VL Y E A+ Sbjct: 174 NSKYAADAQKRMLSLKNRLAKYSIQVAEYYIKMNAWSAAAVRAQSVLETYPGTPSTERAL 233 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + EAY L + V+ ++Q +P Sbjct: 234 EIMAEAYGELGQNQLKQNVLMVMQANFPNNE 264 >gi|300021786|ref|YP_003754397.1| outer membrane assembly lipoprotein YfiO [Hyphomicrobium denitrificans ATCC 51888] gi|299523607|gb|ADJ22076.1| outer membrane assembly lipoprotein YfiO [Hyphomicrobium denitrificans ATCC 51888] Length = 309 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 70/222 (31%), Positives = 123/222 (55%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S + +++ A + +F A + F R+ P++ ARKS++M+A+ Y AGK Sbjct: 59 SALNPDPPSKMFANADAKMSSGSFDDAAKQFEAVDREHPYSPEARKSIVMAAYAYYRAGK 118 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 +A + E Y+ +P +K ++++ MSY ++ DQ A + L+ + R+ Sbjct: 119 TPEAIASAERYVALHPGTKEAPMAHHIIAMSYFDDLKTANRDQTAARKALEQFKILRTRF 178 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 S Y + A + + + LAA+E+E+GRYYL + YVAAI RF+ V+++Y H EEA Sbjct: 179 PESEYSRDADNKIRICMDNLAAQEMEVGRYYLNQHNYVAAINRFKTVVSDYQTTAHVEEA 238 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 +ARLVE+Y+AL ++ EA+ +++ YP W + L++ Sbjct: 239 LARLVESYMALGVVTEAQNAAAILGHNYPDSKWYKDSYALLQ 280 >gi|253996249|ref|YP_003048313.1| outer membrane assembly lipoprotein YfiO [Methylotenera mobilis JLW8] gi|253982928|gb|ACT47786.1| outer membrane assembly lipoprotein YfiO [Methylotenera mobilis JLW8] Length = 267 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 109/247 (44%), Gaps = 16/247 (6%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 L F ++ C + G + T +Y++ ++++++ KA YF + Sbjct: 6 ILAFTFLLSGCAIFGAPTEIDD-------TKGWTAERIYQEGAAKMQDRDYDKAIVYFQK 58 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +P A ++ L +A+ Y A + + +I +P+ NVDY YYL G++ Sbjct: 59 LESRYPHGKYATQAQLETAYAHYKKQDPVSAVAAADRFIKLHPDHPNVDYAYYLKGLAVF 118 Query: 143 Q---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + D RA K +V RY S YVK A + N L+ E Sbjct: 119 NERGIIEKLTKQQVSDRDPRALKDSFATFKELVTRYPKSRYVKDATQRMVYLANSLSEHE 178 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + RYY+KR YVAAI R + V+ Y + H EEA+ ++ AY + + D + + ++ Sbjct: 179 LHVARYYMKRKAYVAAINRTKYVIEYYPQSPHVEEALVIMISAYDLMGMDDLKNDTLRVL 238 Query: 254 QERYPQG 260 + YP Sbjct: 239 KTNYPDS 245 >gi|152980898|ref|YP_001353082.1| competence lipoprotein ComL [Janthinobacterium sp. Marseille] gi|151280975|gb|ABR89385.1| competence lipoprotein ComL [Janthinobacterium sp. Marseille] Length = 261 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 14/251 (5%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L I L + T ++Y +A + +++KA +F + Sbjct: 2 LKITIVALAFLLSACSLTPDKFDE----TKNWSPSKLYSEAREEMNVGDYAKAVSHFEKL 57 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF A+++ + A+ Y G QA + E +I +P+ NVDY+YYL G+ Sbjct: 58 ESRYPFGTYAQQAQMEIAYAYYRQGDQPQALAAVERFIKLHPDHPNVDYMYYLRGLINFN 117 Query: 144 ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 D +A + + ER+ +S Y A + N +A + Sbjct: 118 DKVSIFDFVSRQDPTERDPKAAREAFDSFKLLTERFPDSKYTPDATARLAYLVNGMAQYD 177 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 V + YY +RG Y+AA+ R Q + NY A E A+ ++ +Y AL L + ++ Sbjct: 178 VHVANYYYRRGAYLAAVNRAQSAVKNYPGAPAVEGALYVMIRSYDALNLPQLRDDAERVM 237 Query: 254 QERYPQGYWAR 264 + +P + R Sbjct: 238 KTNFPDSVYFR 248 >gi|163868705|ref|YP_001609917.1| competence lipoprotein precursor [Bartonella tribocorum CIP 105476] gi|161018364|emb|CAK01922.1| competence lipoprotein precursor [Bartonella tribocorum CIP 105476] Length = 297 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 87/255 (34%), Positives = 135/255 (52%), Gaps = 1/255 (0%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDS-VTDVRYQREVYEKAVLFLKEQNFSKA 76 + + L + + C L G + + + V + +Y + + L+ + A Sbjct: 17 NIVRKILGVMLLGSTCMLAGCLFKEKNTLDPSAYVLKIDPPDVLYNQGLASLESGRLADA 76 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + F + + + + RKSL+M AF Y GKY + S+ + YIT YP S + Y YY+ Sbjct: 77 AKKFLKIEKQYAYTDWGRKSLVMGAFTNYRLGKYDDSISMAQRYITLYPGSTDSAYAYYI 136 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 +G+S + I DV DQR TK + M ++ERY NS YVK A+ + GR QLA KE++I Sbjct: 137 IGLSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPNSEYVKDAKDKIRFGREQLAGKEMQI 196 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 GRYY + Y+AA RF+ V+ YSD EEA+ RL E +AL L EA+ +++ Sbjct: 197 GRYYEEGRRYLAASRRFRTVVEEYSDTNQIEEALFRLTEVNLALGLTAEAQTAAAILGRN 256 Query: 257 YPQGYWARYVETLVK 271 YPQ W ++ L++ Sbjct: 257 YPQSEWYKFSYNLLQ 271 >gi|209550164|ref|YP_002282081.1| outer membrane assembly lipoprotein YfiO [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535920|gb|ACI55855.1| outer membrane assembly lipoprotein YfiO [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 281 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 91/257 (35%), Positives = 150/257 (58%), Gaps = 5/257 (1%) Query: 19 LYKFALTIFFSI----AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74 + K A +F S+ A + G + D+ + +Y + + +K N + Sbjct: 1 MMKTARALFASLLVLSAGASISGCQSDPDIDIT-KLGLETDPPDVLYTQGLANMKAGNMA 59 Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 +A F+ R+ PF+ ARK+L+MS FV+Y G+ A + G Y++QYP+S++ YV Sbjct: 60 EAARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALTSGNRYMSQYPKSQDAAYVQ 119 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 YL+G++Y++ I DV DQRA+ ++ M +++ Y NS YV A+ + R+QLA KE+ Sbjct: 120 YLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQAKIRFARDQLAGKEM 179 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +IGRYY++R EY+AAI RF++V+ Y + EEA+ARLVEAY A+ ++DEA+ +++ Sbjct: 180 QIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLG 239 Query: 255 ERYPQGYWARYVETLVK 271 YP W L++ Sbjct: 240 HNYPDSQWYADSYKLLQ 256 >gi|241663188|ref|YP_002981548.1| outer membrane assembly lipoprotein YfiO [Ralstonia pickettii 12D] gi|240865215|gb|ACS62876.1| outer membrane assembly lipoprotein YfiO [Ralstonia pickettii 12D] Length = 285 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 14/251 (5%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + +A + + T ++Y +A L +++KA +Y+ + Sbjct: 26 VLVAGVACLAISACGILPEQQDE----TAGWSANKLYSEAKDSLDGGDYAKAVKYYEKLE 81 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +PF A+++ + +A+ Y G+ A + + +I +P +VDY YYL G+ Sbjct: 82 SRYPFGPYAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLKGLINFND 141 Query: 145 ----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 D +A + ++ R+ NS Y A + N +A EV Sbjct: 142 NLGWLGRFSNQDLSERDPKAARAAYDAFKTLITRFPNSKYTPDATQRMQYIVNAMAEHEV 201 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 RYY +RG Y+AA+ R Q + +Y A EEA+ ++++Y AL + D + +I+ Sbjct: 202 GAARYYYRRGAYLAAVNRAQDAIKDYDRAPAVEEALYIMMKSYEALGMKDMRDDTERIIK 261 Query: 255 ERYPQGYWARY 265 + YP+ + Y Sbjct: 262 QNYPKSDFLAY 272 >gi|117921610|ref|YP_870802.1| putative lipoprotein [Shewanella sp. ANA-3] gi|117613942|gb|ABK49396.1| putative lipoprotein [Shewanella sp. ANA-3] Length = 282 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 59/271 (21%), Positives = 100/271 (36%), Gaps = 17/271 (6%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 M L + Y+ K + FS+A S + + + Sbjct: 15 MEKFLTTTYKELNSSMYKFSKGLTLVLFSLA-------LSACSSSPEDNDIAAKTSPDVL 67 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A ++ N+SKA FPF + L + Y + + + Sbjct: 68 YSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDRF 127 Query: 121 ITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYT 170 I P N+DYVYY+ G+ Q I D + + + R+++ Y Sbjct: 128 IRLNPTHPNIDYVYYMRGLVNMQADSYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTYP 187 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 NS Y A+ + +N+LA +++ YY+K + AA R Q VL Y E A+ Sbjct: 188 NSKYAADAQKRMLSLKNRLAKYSIQVAEYYIKMNAWSAAAVRAQSVLETYPGTPSTERAL 247 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + EAY L + V+ ++Q +P Sbjct: 248 EIMAEAYGELGQNQLKQNVLMVMQANFPNNE 278 >gi|237653788|ref|YP_002890102.1| outer membrane assembly lipoprotein YfiO [Thauera sp. MZ1T] gi|237625035|gb|ACR01725.1| outer membrane assembly lipoprotein YfiO [Thauera sp. MZ1T] Length = 269 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 10/223 (4%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T +++Y +A + E + +A F + +P+ A+++ L A+ Y G+ Sbjct: 34 TAGWNAQKLYSEAKASMSEGGYDRAVTLFEKLEARYPYGRFAQQAQLEVAYAYYKQGEQA 93 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQY 161 A + + +I +P NVDY YYL G+ + D + + Sbjct: 94 LALAAADRFIKLHPNHPNVDYAYYLKGLVNFNEDLGLLAGLSRQDLSERDPKGAREAFDS 153 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 +VER+ S Y +R + N LA+ EV + RYY RG YVAAI R Q + N+ Sbjct: 154 FRELVERFPESRYADDSRARMQYLINSLASHEVHVSRYYYNRGAYVAAINRAQTAVNNFP 213 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 A EEA+ +V +Y L + + ++++ +P + R Sbjct: 214 QAPAIEEALFLMVMSYDKLGMAQLRDDADRVMRKNFPDSVYFR 256 >gi|163741561|ref|ZP_02148952.1| competence lipoprotein ComL, putative [Phaeobacter gallaeciensis 2.10] gi|161385295|gb|EDQ09673.1| competence lipoprotein ComL, putative [Phaeobacter gallaeciensis 2.10] Length = 282 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 71/252 (28%), Positives = 125/252 (49%), Gaps = 1/252 (0%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + A TI + V L G + ++YE+ ++ A Sbjct: 4 MGAAAKTIGAVLLVAALSGCGGDGGA-AKSSQPLEGFTPEQIYERGEFEMERNRTEDAAF 62 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 YF++ R +P++ A+++L+M A+ + Y+ + + + YI YP ++ Y YL+ Sbjct: 63 YFSEIERLYPYSSWAKQALIMQAYAYHLGRDYEDSRAAAQRYIDFYPTEEDAAYAQYLLA 122 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY I +V DQ T LQ + ++E Y +S Y A + + LA KE+EIGR Sbjct: 123 LSYYDQIDEVGRDQGLTFQALQSLRTVIEVYPDSEYASSAILKFDLAFDHLAGKEMEIGR 182 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYL++ Y +A+ RF++V+ ++ H EA+ RLVEAY++L L++EA+ +++ Y Sbjct: 183 YYLRKEHYTSAVNRFRVVVEDFQTTTHTAEALHRLVEAYLSLGLVNEAQTAGAILGHNYQ 242 Query: 259 QGYWARYVETLV 270 W L+ Sbjct: 243 STEWYEDSFKLL 254 >gi|167031684|ref|YP_001666915.1| competence lipoprotein ComL [Pseudomonas putida GB-1] gi|166858172|gb|ABY96579.1| competence lipoprotein ComL [Pseudomonas putida GB-1] Length = 339 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 105/241 (43%), Gaps = 13/241 (5%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 + + L SS +D + + E+Y++A L +++ A +P Sbjct: 6 LLLIAILGLTAACSSNKEVID---ENLSEAELYQQAQADLDNSSYTSAVNKLKALESRYP 62 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 F A ++ L + Y + + A S E +I +P+ NVDY YYL G++ R + Sbjct: 63 FGRYADQAQLELIYANYKNSEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDRGL 122 Query: 149 ----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D A + +++ R+ NS Y A+ + RN LA+ E+ + Sbjct: 123 LARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVAD 182 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYL R YVAA R + V+ N+ + + +A +VE+Y + L + A + ++ YP Sbjct: 183 YYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQKMHLDELAASSLETLKLNYP 242 Query: 259 Q 259 Sbjct: 243 D 243 >gi|113971329|ref|YP_735122.1| putative lipoprotein [Shewanella sp. MR-4] gi|114048566|ref|YP_739116.1| putative lipoprotein [Shewanella sp. MR-7] gi|113886013|gb|ABI40065.1| putative lipoprotein [Shewanella sp. MR-4] gi|113890008|gb|ABI44059.1| putative lipoprotein [Shewanella sp. MR-7] Length = 282 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 59/271 (21%), Positives = 100/271 (36%), Gaps = 17/271 (6%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 M L + Y+ K + FS+A S + + + Sbjct: 15 MEKFLTTTYKELNSSMYKFSKGLTLVLFSLA-------LSACSSSPEDNDIAAKTSPDVL 67 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A ++ N+SKA FPF + L + Y + + + Sbjct: 68 YSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDRF 127 Query: 121 ITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYT 170 I P ++DYVYY+ G+ Q I D + + + R+++ Y Sbjct: 128 IRLNPTHPDIDYVYYMRGLVNMQADSYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTYP 187 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 NS Y A+ + +N+LA +++ YYLK + AA R Q VL Y E A+ Sbjct: 188 NSKYAADAQKRMLSLKNRLAKYSIQVAEYYLKMNAWSAAAVRAQSVLETYPGTPSTERAL 247 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + EAY L + V+ ++Q +P Sbjct: 248 EIMAEAYGELGQNQLKQNVLMVMQANFPNNE 278 >gi|161869645|ref|YP_001598811.1| competence lipoprotein [Neisseria meningitidis 053442] gi|161595198|gb|ABX72858.1| competence lipoprotein [Neisseria meningitidis 053442] gi|325127791|gb|EGC50699.1| competence lipoprotein comL [Neisseria meningitidis N1568] gi|325133783|gb|EGC56439.1| competence lipoprotein comL [Neisseria meningitidis M13399] gi|325203790|gb|ADY99243.1| competence lipoprotein comL [Neisseria meningitidis M01-240355] Length = 267 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 14/259 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K LT+ +A L Q + D +T ++Y +A L N+++A + Sbjct: 1 MKKILLTVSLGLA---LSACATQGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + FP + AR+S L +A+ Y + +A + E + +P+ N+DY YL G Sbjct: 57 LYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALYLRG 116 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + D +A + Q + +V+R+ NS Y A + + Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMVKLVDA 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A + Sbjct: 177 LGGNEISVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 236 Query: 249 VVSLIQERYPQGYWARYVE 267 +++ +P+ + + Sbjct: 237 TRRVLETNFPKSPFLTHAW 255 >gi|119505581|ref|ZP_01627652.1| competence protein ComL [marine gamma proteobacterium HTCC2080] gi|119458524|gb|EAW39628.1| competence protein ComL [marine gamma proteobacterium HTCC2080] Length = 336 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 63/270 (23%), Positives = 117/270 (43%), Gaps = 15/270 (5%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLV-GWERQSSRDVYLDSVTDVRYQRE 59 M + + + QL + A +A+ +V G D+ + +++ Sbjct: 25 MRTLCLEDYKLLYSDLLQLTRLAARWITLVALITVVSGCSWFGKDDIEIAD----NGEQQ 80 Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A L NF+ A +PF A ++ L + Y A +++ A + Sbjct: 81 IYLEAQRSLDSGNFNTAIRTLQLLESRYPFGRYAEQAQLELVYAHYGAYEFEAAIEAADR 140 Query: 120 YITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERY 169 +I +P+ NVDY YY+ G+S M D D K ++++ R+ Sbjct: 141 FIRLHPQHPNVDYAYYMKGLSAFDMEGGFLASFVPTDDTKRDVSHIKEAFAEFAQLLARF 200 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 +S Y AR + RN LA EV + YY +RG Y+AA+ R + V+ + + Sbjct: 201 PDSAYAPDARARMVHMRNMLARHEVHVANYYFRRGAYMAALNRGRYVVEHMQQTPSVADG 260 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQ 259 +A + +AY+ L D A++ ++++ E +P Sbjct: 261 LAIMAQAYILLDFNDLAKDSIAVLHENFPD 290 >gi|325143910|gb|EGC66220.1| competence lipoprotein comL [Neisseria meningitidis M01-240013] gi|325206454|gb|ADZ01907.1| competence lipoprotein comL [Neisseria meningitidis M04-240196] Length = 267 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 115/259 (44%), Gaps = 14/259 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K LT+ +A L + + D +T ++Y +A L N+++A + Sbjct: 1 MKKILLTVSLGLA---LSACATKGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + FP + AR+S L +A+ Y + +A + E + +P+ N+DY YL G Sbjct: 57 LYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALYLRG 116 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + D +A + Q + +V+R+ NS Y A + + Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMVKLVDA 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A + Sbjct: 177 LGGNEISVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 236 Query: 249 VVSLIQERYPQGYWARYVE 267 +++ +P+ + + Sbjct: 237 TRRVLETNFPKSPFLTHAW 255 >gi|296314699|ref|ZP_06864640.1| competence lipoprotein ComL [Neisseria polysaccharea ATCC 43768] gi|296838533|gb|EFH22471.1| competence lipoprotein ComL [Neisseria polysaccharea ATCC 43768] Length = 267 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 60/259 (23%), Positives = 116/259 (44%), Gaps = 14/259 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + KF LT+ +A L + + D +T ++Y +A L N+++A + Sbjct: 1 MKKFLLTVSLGLA---LSACATKGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + FP + A++S L +A+ Y + +A + + + +P+ N+DY YL G Sbjct: 57 LYEILESRFPTSRHAQQSQLDTAYAYYKDDEKDKALAAIDRFRRLHPQHPNMDYALYLRG 116 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + D +A + Q + +V+R+ NS Y A + + Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMIKLVDA 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A + Sbjct: 177 LGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYKKLDKPQLAAD 236 Query: 249 VVSLIQERYPQGYWARYVE 267 +++ +P+ + + Sbjct: 237 THRVLEANFPKSPFLTHAW 255 >gi|254673629|emb|CBA09175.1| competence lipoprotein ComL [Neisseria meningitidis alpha275] Length = 267 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 14/259 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K LT+ +A L Q + D +T ++Y +A L N+++A + Sbjct: 1 MKKILLTVSLGLA---LSACATQGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + FP + AR+S L +A+ Y + +A + E + +P+ N+DY YL G Sbjct: 57 LYEILESRFPTSLHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALYLRG 116 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + D +A + Q + +V+R+ NS Y A + + Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATVRMVKLVDA 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A + Sbjct: 177 LGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 236 Query: 249 VVSLIQERYPQGYWARYVE 267 +++ +P+ + + Sbjct: 237 TRRVLETNFPKSPFLTHAW 255 >gi|17546346|ref|NP_519748.1| hypothetical protein RSc1627 [Ralstonia solanacearum GMI1000] gi|17428643|emb|CAD15329.1| probable dna uptake lipoprotein transmembrane [Ralstonia solanacearum GMI1000] Length = 289 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 58/255 (22%), Positives = 108/255 (42%), Gaps = 14/255 (5%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + + +A + + T ++Y +A L ++SKA +Y+ Sbjct: 26 RIGAVLAAGVACLAISACGIMPEQQDE----TAGWSANKLYSEAKDALDGGDYSKAVKYY 81 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + +PF A+++ + +A+ Y G+ A + + +I +P +VDY YYL G+ Sbjct: 82 EKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLKGLI 141 Query: 141 YAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 D +A + ++ R+ NS Y A + N +A Sbjct: 142 NFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLITRFPNSKYAPDAAQRMQYIVNAMA 201 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 EV+ RYY +RG Y+AA R Q + +Y A EE + ++++Y AL + D + Sbjct: 202 EHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVEEGLYIMMKSYEALGMKDLRDDTE 261 Query: 251 SLIQERYPQGYWARY 265 +I++ YP + Y Sbjct: 262 RIIKQNYPNSDFLLY 276 >gi|294634725|ref|ZP_06713256.1| competence lipoprotein ComL [Edwardsiella tarda ATCC 23685] gi|291091855|gb|EFE24416.1| competence lipoprotein ComL [Edwardsiella tarda ATCC 23685] Length = 245 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 64/248 (25%), Positives = 108/248 (43%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + LVG SS++ D+ E+Y A L++ NF A Sbjct: 1 MTRIKYLVAATTLSLALVGCS--SSKEAVPDNPP-----AEIYATAQQKLQDGNFKAAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y + A + + +I P S+N+ YV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPMAQATIDRFIRLNPTSQNMPYVLYMRG 113 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ M I D + + S++V+RY NS Y A + +N+ Sbjct: 114 LTDMAMDDSALQGFFGIDRSDRDPEHARQAFRDFSQLVQRYPNSQYSSDATKRLIFLKNR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + R+Y KRG YVA + R + +L NY D + +A+ + AY L LM EA + Sbjct: 174 LAKHELAVARFYTKRGAYVAVVNRVEQMLRNYPDTQATRDALPLMENAYRQLGLMSEAAK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VQKIIAFN 241 >gi|312114836|ref|YP_004012432.1| outer membrane assembly lipoprotein YfiO [Rhodomicrobium vannielii ATCC 17100] gi|311219965|gb|ADP71333.1| outer membrane assembly lipoprotein YfiO [Rhodomicrobium vannielii ATCC 17100] Length = 287 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 72/251 (28%), Positives = 128/251 (50%), Gaps = 1/251 (0%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYF 80 A I + L G S +S D R ++Y++A L + +KA E F Sbjct: 10 LAAVILATTLSSSLGGCGSMGSMFSSSESTQLDQRPPDQIYKEADDLLGQGKNNKAAELF 69 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + + +P++ A+KS LM+A+ AGK +A + +++ +P SK ++ S Sbjct: 70 ERIDQLYPYSEEAKKSTLMAAYAYQKAGKGPEAVAAARRFLSLHPGSKEAALAQEIIASS 129 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 Y + I DQ TK + + ++ RY +S Y + A+ + + R+ LAA E+ +GRY+ Sbjct: 130 YFERISGPTRDQGETKKAIAELETLISRYPDSRYSEDAKRRIKLARDTLAASEMNVGRYW 189 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 K+G Y+ A+ RF+ V+ Y H EEA+ RL E Y+AL +++EA+ +++ +P Sbjct: 190 QKKGNYLGAVNRFKTVVTEYQQTTHVEEALMRLTECYMALGIVNEAQTAAAVLGHNFPDS 249 Query: 261 YWARYVETLVK 271 W + L++ Sbjct: 250 PWYKDAYALLQ 260 >gi|83745882|ref|ZP_00942939.1| transmembrane protein [Ralstonia solanacearum UW551] gi|83727572|gb|EAP74693.1| transmembrane protein [Ralstonia solanacearum UW551] Length = 289 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 59/255 (23%), Positives = 109/255 (42%), Gaps = 14/255 (5%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + + +A + + T ++Y +A L ++SKA +Y+ Sbjct: 26 RIGAVMAAGVACLAISACGIMPEQQDE----TAGWSANKLYSEAKDALDGGDYSKAVKYY 81 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + +PF A+++ + +A+ Y G+ A + + +I +P +VDY YYL G+ Sbjct: 82 EKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLKGLI 141 Query: 141 YAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 D +A + ++ R+ NS Y A + N +A Sbjct: 142 NFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLITRFPNSKYTPDAAQRMQYIVNAMA 201 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 EV+ RYY +RG Y+AA R Q + +Y A EEA+ ++++Y AL + D + Sbjct: 202 EHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVEEALYIMMKSYEALGMKDLRDDTE 261 Query: 251 SLIQERYPQGYWARY 265 +I++ YP + Y Sbjct: 262 RIIKQNYPNSNFMLY 276 >gi|71907235|ref|YP_284822.1| putative competence lipoprotein precursor [Dechloromonas aromatica RCB] gi|71846856|gb|AAZ46352.1| putative competence lipoprotein precursor [Dechloromonas aromatica RCB] Length = 257 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 14/244 (5%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 V F+ G S + T ++Y ++ + N+ KA +Y + FP+ Sbjct: 6 VAFIAGCGSTSEKFDE----TSGWSAGKLYSESKDAQADGNWEKAAKYLEKLEARFPYGR 61 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI------ 145 A+++ L +V + + A + + +I +P VDYVYYL G+ Sbjct: 62 YAQQAQLELGYVYWKGNEPGSALAACDRFIKLHPSHPTVDYVYYLKGLINFNEDLGLTAY 121 Query: 146 ----RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 D +A + +V R+ S Y A + N LA+ EV + RYY+ Sbjct: 122 ISSQDPTERDPKAAREAFDAFKELVTRFPESKYAPDASLRMNYLVNALASLEVHVARYYV 181 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 KRG Y+AA R Q + Y A EEAM LV +Y + + + + ++++ +P Sbjct: 182 KRGAYIAAANRAQFAVKTYPQAPAIEEAMFILVTSYDKMGMNELRDDAQRVMKKNFPNSR 241 Query: 262 WARY 265 + Sbjct: 242 YYND 245 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 43/121 (35%), Gaps = 22/121 (18%) Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFV-------------QY-SAGKYQQAASLGEEY 120 +A++ F + FP + A + L ++ Y G Y AA+ + Sbjct: 137 EAFDAFKELVTRFPESKYAPDASLRMNYLVNALASLEVHVARYYVKRGAYIAAANRAQFA 196 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + YP++ ++ +++ SY +M + D + + + NS Y Sbjct: 197 VKTYPQAPAIEEAMFILVTSYDKMGMNELRD--------DAQRVMKKNFPNSRYYNDGLE 248 Query: 181 Y 181 Sbjct: 249 R 249 >gi|296445566|ref|ZP_06887522.1| outer membrane assembly lipoprotein YfiO [Methylosinus trichosporium OB3b] gi|296256971|gb|EFH04042.1| outer membrane assembly lipoprotein YfiO [Methylosinus trichosporium OB3b] Length = 292 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 80/228 (35%), Positives = 126/228 (55%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S + Y + ++Y +A+ L+ +++ A + F + + +PF+ ARK LLM F Sbjct: 40 SGEKYKTELLPDIPAEDIYNQALAKLEAKDYETAAKKFGELEKQYPFSHWARKGLLMQTF 99 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 QYS Y A + + YI YP S Y+YYL GMSY + V DQ + L Sbjct: 100 AQYSKPSYDDAVASAQRYIGLYPTSPETPYMYYLAGMSYYNQVPGVMQDQETAQKALVIF 159 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 +++VE++ S YV ++ + V R+QLAAK++ +GR+YL R Y AA+ RF VLA Y Sbjct: 160 NQLVEKFPKSEYVADVKYKIQVARDQLAAKDMSVGRFYLTRKNYPAAVNRFHDVLAKYQT 219 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 HAEEA+ RL EAY A+ +++EA+ +++ +P W + L+ Sbjct: 220 TRHAEEALYRLTEAYFAMGIVNEAQTAAAILGHNFPDSQWYKDAHELL 267 >gi|254482813|ref|ZP_05096050.1| outer membrane assembly lipoprotein YfiO [marine gamma proteobacterium HTCC2148] gi|214036894|gb|EEB77564.1| outer membrane assembly lipoprotein YfiO [marine gamma proteobacterium HTCC2148] Length = 289 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 62/249 (24%), Positives = 113/249 (45%), Gaps = 17/249 (6%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K+AL S+ + G + L + ++++YE+A +L+ +N++ A Sbjct: 2 KYALVFLLSLIIIGCSG-------NDELPDIAADTGEQQIYEEAQRYLRNKNWNLAVRSL 54 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 +PF A +S L + Y+ ++ A E +I +P NVDY YY+ G++ Sbjct: 55 QVLESRYPFGKYAEQSQLEIIYAHYNGYEHDAAVEAAERFIRLHPAHPNVDYAYYMKGLA 114 Query: 141 YAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 D+ D K +++V R+ +SPY AR + RN LA Sbjct: 115 AFAGNDDIFSRFLPTDESERDVSQAKEAFAEFNQLVSRFPDSPYAPDARARMVHLRNLLA 174 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 E+ + YY +RG Y+AA R + V+ N+ + +A + + Y+ L L D A++ + Sbjct: 175 RHEILVANYYFRRGAYMAATNRGRYVVENFQRTPAVADGLAVMAQGYILLGLEDLAKDTI 234 Query: 251 SLIQERYPQ 259 ++ YP+ Sbjct: 235 GILAMNYPE 243 >gi|103486038|ref|YP_615599.1| DNA uptake lipoprotein [Sphingopyxis alaskensis RB2256] gi|98976115|gb|ABF52266.1| DNA uptake lipoprotein [Sphingopyxis alaskensis RB2256] Length = 264 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 79/248 (31%), Positives = 127/248 (51%), Gaps = 7/248 (2%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 I +A C G +Q +R V D T +Y A L + A F++ Sbjct: 18 FVITPMLAACAGGGGVKQDTRYVARDVNT-------LYRAAQERLDRGQYGIAAALFDEV 70 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 R P++ AR++ LMS+F Y +Y A + ++ +P +K+ Y YYL+ +SY + Sbjct: 71 ERQHPYSPWARRAQLMSSFSYYMDREYTPAIEAAQRFLAIHPGNKDAPYAYYLIALSYYE 130 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 I DV DQR T+ + IV RY +S Y AR + + ++ LA KE+EIGR+Y + Sbjct: 131 QISDVTRDQRITQQAQAALGEIVRRYPDSRYAADARLKLDLVQDHLAGKEMEIGRFYQRS 190 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 ++AA RF+ V+ Y HA EA+ RL E+Y+AL + +EA++ +++ YP W Sbjct: 191 SNWLAASIRFREVVDKYQTTSHAPEALYRLTESYLALGIPEEAKKSAAVLGANYPGNEWY 250 Query: 264 RYVETLVK 271 L++ Sbjct: 251 ERAYKLMQ 258 >gi|110680523|ref|YP_683530.1| competence lipoprotein ComL, putative [Roseobacter denitrificans OCh 114] gi|109456639|gb|ABG32844.1| competence lipoprotein ComL, putative [Roseobacter denitrificans OCh 114] Length = 288 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 123/251 (49%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + + +A C + + + +++E+ L A Y Sbjct: 10 FSAVALLIVGMAGCTSDPGRTTGTIFNPQEVPLEAFEAEQIFERGEFELTRNRPDDAAFY 69 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F + R +P++ AR++L+M AF + Y + S + +I YP+ + Y YL+ + Sbjct: 70 FAEIERLYPYSDWARRALIMQAFSYHQDQDYPNSRSAAQRFIDFYPDDDDAAYAQYLLAL 129 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 SY I +V DQ T LQ + + +ERY +S Y + + + + LA KE+EIGRY Sbjct: 130 SYYDQIDEVGRDQGLTFQALQALRQTIERYPDSEYARSSILKFDLAFDHLAGKEMEIGRY 189 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YL+R + AAI RF++V+ ++ H EA+ RLVEAY++L L D+A+ +++ Y Sbjct: 190 YLRRDHFAAAINRFRVVVEDFQTTSHTPEALHRLVEAYLSLGLTDQAQTAAAILGYNYQS 249 Query: 260 GYWARYVETLV 270 W + L+ Sbjct: 250 TVWYQDSFALL 260 >gi|84686348|ref|ZP_01014242.1| Putative ComL lipoprotein [Maritimibacter alkaliphilus HTCC2654] gi|84665531|gb|EAQ12007.1| Putative ComL lipoprotein [Rhodobacterales bacterium HTCC2654] Length = 297 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 76/251 (30%), Positives = 130/251 (51%), Gaps = 3/251 (1%) Query: 23 ALTIFFSIAVCFLVGWERQSSR---DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 L + ++A C G S D + ++Y +A L+ ++ +A ++ Sbjct: 19 TLALVVTLAGCSGTGLGTAFSNLFGDDRETKPIEDYTAEQIYARAEYDLENNDYDEAAKW 78 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F + R +P+ +A+++L+M AF + G+Y+ A + + ++ YP ++ Y YL+ + Sbjct: 79 FGEVERVYPYTQLAKRALIMQAFAHHKDGEYELARAAAQRFVDFYPGDEDAGYATYLLAL 138 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 SY I DV DQ T LQ + ++E Y ++ Y + A + + LAAKE+EIGRY Sbjct: 139 SYYDQIEDVGRDQGLTYQALQALRDVIELYPDTEYARSAILKFDLAYDHLAAKEMEIGRY 198 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YLKR Y AA+ RF++V+ + EA+ RLVE+YV+L L DEA +++ Y Sbjct: 199 YLKRKHYAAAVNRFRVVVEQFQTTTQTPEALHRLVESYVSLGLSDEAETAGAILGYNYQS 258 Query: 260 GYWARYVETLV 270 W + L+ Sbjct: 259 TEWYQDSYNLL 269 >gi|269140176|ref|YP_003296877.1| lipoprotein [Edwardsiella tarda EIB202] gi|267985836|gb|ACY85665.1| lipoprotein [Edwardsiella tarda EIB202] gi|304560009|gb|ADM42673.1| Putative lipoprotein assembly complex component [Edwardsiella tarda FL6-60] Length = 245 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + LVG SS++ D+ E+Y A L++ NF A Sbjct: 1 MTRIKYLVAATTLSLALVGCS--SSKEAVPDNPP-----AEIYATAQQKLQDGNFKAAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y + A + + +I P S+N+ YV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPMAQATIDRFIRLNPTSQNMPYVLYMRG 113 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ M I D + + S++V+RY NS Y A + +N+ Sbjct: 114 LTDMAMDDSALQGFFGIDRSDRDPEHARQAFRDFSQLVQRYPNSAYTTDATKRLLFLKNR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + R+Y KRG YVA + R + +L NY D + +A+ + AY + L EA + Sbjct: 174 LAKHELAVARFYTKRGAYVAVVNRVEQMLRNYPDTQATRDALPLMENAYRQMGLNGEADK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VQKIIAFN 241 >gi|254474921|ref|ZP_05088307.1| lipoprotein [Ruegeria sp. R11] gi|214029164|gb|EEB69999.1| lipoprotein [Ruegeria sp. R11] Length = 282 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 71/252 (28%), Positives = 126/252 (50%), Gaps = 1/252 (0%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + A TI + + L G + ++YE+ ++ A Sbjct: 4 MGAAAKTIGAFLLIAALSGCGGDGGA-AKSAQPLEGFTPEQIYERGEFEMERNRTKDAAF 62 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 YF + R +P++ A+++L+M A+ + Y+++ + + YI YP ++ Y YL+ Sbjct: 63 YFAEIERLYPYSSWAKQALIMQAYAYHLGRDYEESRAAAQRYIDFYPTEEDAAYAQYLLA 122 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY I +V DQ T LQ + ++E Y +S Y A + + LA KE+EIGR Sbjct: 123 LSYYDQIDEVGRDQGLTFQALQSLRTVIEVYPDSEYANSAILKFDLAFDHLAGKEMEIGR 182 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYL++G Y +A+ RF++V+ ++ H EA+ RLVEAY++L L++EA+ +++ Y Sbjct: 183 YYLRKGHYTSAVNRFRVVVEDFQTTTHTAEALHRLVEAYLSLGLVNEAQTAGAILGHNYQ 242 Query: 259 QGYWARYVETLV 270 W L+ Sbjct: 243 STEWYEDSFKLL 254 >gi|91205917|ref|YP_538272.1| DNA uptake lipoprotein [Rickettsia bellii RML369-C] gi|157826722|ref|YP_001495786.1| DNA uptake lipoprotein [Rickettsia bellii OSU 85-389] gi|91069461|gb|ABE05183.1| DNA uptake lipoprotein [Rickettsia bellii RML369-C] gi|157802026|gb|ABV78749.1| DNA uptake lipoprotein [Rickettsia bellii OSU 85-389] Length = 253 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 74/248 (29%), Positives = 124/248 (50%), Gaps = 3/248 (1%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L S +C + S+ D VT + +Y + V L+++ + A E F + Sbjct: 3 LAKILSALLCLGLILNGCKSKKSNDDLVTPIST---LYNEGVTLLEKKKYKNAAEEFEKI 59 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 P ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL +SY Sbjct: 60 FYQHPGNEFTPQAELMQAYSLFLAAQYEEAVDVLDIFINLHPANVDIAYAYYLKALSYYM 119 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 +I DV +DQ T L ++ ++ N+ Y + + + + LA KE+ IGR+YLK+ Sbjct: 120 LISDVNHDQSRTFLAKDSFEDLITKFPNTKYAIDSSLKIDLVNDHLAGKELTIGRFYLKK 179 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 +AAI RF+ V+ NY H EA+ RL E+Y+ L L DEA + S++ YP W Sbjct: 180 KNPMAAINRFEEVVENYQTTSHCVEALYRLTESYMMLGLSDEAMKYASVLGHNYPDSKWY 239 Query: 264 RYVETLVK 271 Y L+K Sbjct: 240 SYAYKLIK 247 >gi|319899149|ref|YP_004159242.1| competence lipoprotein precursor [Bartonella clarridgeiae 73] gi|319403113|emb|CBI76671.1| competence lipoprotein precursor [Bartonella clarridgeiae 73] Length = 306 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 82/253 (32%), Positives = 128/253 (50%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K + IF C + + V + +Y +A+ L ++A + Sbjct: 28 VRKVLIGIFLGGTCCLAGCLGKGKNVLDPSVHVLKIDPPDVLYNQALANLDAGRLNEAAK 87 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F + + + RK+L+M AF Y KY A S+ + YI+ YP + + Y YY++G Sbjct: 88 KFAIIEKQYAYTEWGRKALVMGAFTNYRLAKYDDAISMAQHYISLYPLADDSAYAYYIIG 147 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +S + I DV DQR TK + M ++ERY S YV A+ + GR QLA KE++IGR Sbjct: 148 LSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPQSEYVSDAKAKIRFGREQLAGKEMQIGR 207 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YY + +Y+AA RF+ V+ YSD EEA+ RL E AL L EA+ +++ YP Sbjct: 208 YYEEGQQYLAASRRFRTVIEEYSDTNQIEEALFRLTEVNFALGLTMEAQTAAAILGRNYP 267 Query: 259 QGYWARYVETLVK 271 W ++ L++ Sbjct: 268 GSKWYKFSYDLLQ 280 >gi|238791394|ref|ZP_04635033.1| hypothetical protein yinte0001_31510 [Yersinia intermedia ATCC 29909] gi|238729527|gb|EEQ21042.1| hypothetical protein yinte0001_31510 [Yersinia intermedia ATCC 29909] Length = 240 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 15/240 (6%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 + A LV S++DV D+ E+Y A L++ NF A Sbjct: 4 LVAAATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNR 58 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-- 144 +PF +++ L + Y + A + + ++ P N+DYV Y+ G++ + Sbjct: 59 YPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDD 118 Query: 145 --------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 I D + K + +++++ Y NS Y A+ +T +N+LA E+ + Sbjct: 119 SALQGFFGIDRSDRDPQHAKAAFRDFNQLIQNYPNSQYATDAQKRLTFLKNRLAKHELAV 178 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +YY KRG YVA + R + +L +Y D + +A+ + AY L L EA +V +I Sbjct: 179 AQYYTKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLNAEADKVAKIIAAN 238 >gi|261377889|ref|ZP_05982462.1| competence lipoprotein ComL [Neisseria cinerea ATCC 14685] gi|269145742|gb|EEZ72160.1| competence lipoprotein ComL [Neisseria cinerea ATCC 14685] Length = 267 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 115/260 (44%), Gaps = 14/260 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K LT+ +A L + + D +T ++Y +A L N+++A + Sbjct: 1 MKKILLTVSLGLA---LSACATKGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + FP + A++S L +A+ Y + +A + + + +P+ N+DY YL G Sbjct: 57 LYEILESRFPTSRHAQQSQLDTAYAYYKDDEKDKALAAIDRFRRLHPQHPNMDYALYLRG 116 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + D +A + Q + +V+R+ NS Y A + + Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMIKLVDA 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A + Sbjct: 177 LGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYKKLDKPQLAAD 236 Query: 249 VVSLIQERYPQGYWARYVET 268 +++ +P+ + + Sbjct: 237 THRVLEANFPKSPFLKQPWR 256 >gi|238760704|ref|ZP_04621825.1| hypothetical protein yaldo0001_36270 [Yersinia aldovae ATCC 35236] gi|238701077|gb|EEP93673.1| hypothetical protein yaldo0001_36270 [Yersinia aldovae ATCC 35236] Length = 240 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 15/240 (6%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 + A LV S++DV D+ E+Y A L++ NF A Sbjct: 4 LVAAATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNR 58 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-- 144 +PF +++ L + Y + A + + ++ P N+DYV Y+ G++ + Sbjct: 59 YPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDD 118 Query: 145 --------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 I D + K + +++++ Y NS Y A+ + +N+LA E+ + Sbjct: 119 SALQGFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLVFLKNRLAKHELAV 178 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +YY KRG YVA + R + +L +Y D + +A+ + AY L L EA +V +I Sbjct: 179 AQYYTKRGAYVAVVNRVEQMLRDYPDTQATHDALPLMENAYKQLQLNAEADKVAKIIAAN 238 >gi|126461561|ref|YP_001042675.1| TPR repeat-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|221638526|ref|YP_002524788.1| hypothetical protein RSKD131_0427 [Rhodobacter sphaeroides KD131] gi|332557550|ref|ZP_08411872.1| Tetratricopeptide TPR_2 repeat protein precursor [Rhodobacter sphaeroides WS8N] gi|126103225|gb|ABN75903.1| Tetratricopeptide TPR_2 repeat protein [Rhodobacter sphaeroides ATCC 17029] gi|221159307|gb|ACM00287.1| Tetratricopeptide TPR_2 repeat protein precursor [Rhodobacter sphaeroides KD131] gi|332275262|gb|EGJ20577.1| Tetratricopeptide TPR_2 repeat protein precursor [Rhodobacter sphaeroides WS8N] Length = 278 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 76/253 (30%), Positives = 134/253 (52%), Gaps = 5/253 (1%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAY 77 + A + ++ V + G S ++ L++ T ++Y++ L+ + +A Sbjct: 2 VKSGARLLGTALCVALVAGCGGGSQKEPPLENFT----AEQIYQRGEYELEARTKPDRAI 57 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 YF++ R +P+ A+++L+M A+ + A Y++A + ++ YP ++ Y YL+ Sbjct: 58 RYFSEVERLYPYTEWAKRALIMQAYSYHKAKDYEEARGAAQRFLDFYPGDEDAAYAQYLL 117 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 +SY I +V DQ T LQ + ++E Y S Y + A + + LAAKE+EIG Sbjct: 118 ALSYYDQIDEVGRDQGLTFQALQALRVVIEDYPESEYAQSAILKFDLAFDHLAAKEMEIG 177 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 RYYLKRG Y AAI RF+ V+ ++ H EA+ RLVE+Y+AL L++EA+ +++ Y Sbjct: 178 RYYLKRGHYTAAINRFRTVVEDFQTTTHTAEALHRLVESYLALGLVNEAQTAGAILGHNY 237 Query: 258 PQGYWARYVETLV 270 + L+ Sbjct: 238 RSSPFYEDSYKLL 250 >gi|297183891|gb|ADI20013.1| DNA uptake lipoprotein [uncultured gamma proteobacterium EB000_65A11] Length = 285 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 112/247 (45%), Gaps = 13/247 (5%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 ++ + +++ FL G + + D + E Y+ + L+ N+ A E Sbjct: 9 SIAMLSLLSLIFLAGCSSDKAEEGEEDI---DATELEYYKMSQSALRSGNYQTAVERLQF 65 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 FPF A ++ L + Y + + + A + + +I +P+ NVDY YYL GM+ Sbjct: 66 LEARFPFGRYAEQAQLEIIYAYYKSAQSESARAAADRFIRLHPQHPNVDYAYYLRGMASF 125 Query: 143 QMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 + D A + S++++R+ NS Y A++ + RN LA Sbjct: 126 DEDTNFLEKFIPMNAATRDPGAARDSFNDFSQLIKRFPNSQYAPDAQYRMIYLRNLLAEY 185 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E+ + RYY+ RG Y+AA R + V N+ + + +A +VEAY L + A E + + Sbjct: 186 EINVARYYIYRGAYIAAANRGRHVFENFQETPSVPDGLAIMVEAYTLLNMETLASEALMV 245 Query: 253 IQERYPQ 259 + E +P Sbjct: 246 LSENFPD 252 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 29/70 (41%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L+ G Y A+ R Q + A + +AE+A ++ AY A + AR +PQ Sbjct: 51 LRSGNYQTAVERLQFLEARFPFGRYAEQAQLEIIYAYYKSAQSESARAAADRFIRLHPQH 110 Query: 261 YWARYVETLV 270 Y L Sbjct: 111 PNVDYAYYLR 120 >gi|218547882|ref|YP_002381673.1| outer membrane protein assembly complex subunit YfiO [Escherichia fergusonii ATCC 35469] gi|218355423|emb|CAQ88031.1| putative lipoprotein [Escherichia fergusonii ATCC 35469] gi|324111236|gb|EGC05218.1| outer membrane assembly lipoprotein YfiO [Escherichia fergusonii B253] gi|325496331|gb|EGC94190.1| outer membrane protein assembly complex subunit YfiO [Escherichia fergusonii ECD227] Length = 245 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 100/252 (39%), Gaps = 17/252 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A + Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233 Query: 249 VVSLIQERYPQG 260 V +I Sbjct: 234 VAKIIATNSSNS 245 >gi|238765379|ref|ZP_04626303.1| hypothetical protein ykris0001_45070 [Yersinia kristensenii ATCC 33638] gi|238696421|gb|EEP89214.1| hypothetical protein ykris0001_45070 [Yersinia kristensenii ATCC 33638] Length = 240 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 15/240 (6%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 + A LV S++DV D+ E+Y A L++ NF A Sbjct: 4 LVAAATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNR 58 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-- 144 +PF +++ L + Y + A + + ++ P N+DYV Y+ G++ + Sbjct: 59 YPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDD 118 Query: 145 --------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 I D + K + +++++ Y NS Y A+ +T +N+LA E+ + Sbjct: 119 SALQGFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLTFLKNRLAKHELAV 178 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +YY KRG YVA + R + +L +Y D + +A+ + AY L L EA +V +I Sbjct: 179 AQYYTKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLNAEADKVAKIIAAN 238 >gi|15676601|ref|NP_273745.1| competence lipoprotein [Neisseria meningitidis MC58] gi|18203154|sp|Q9K0B1|COML_NEIMB RecName: Full=Competence lipoprotein ComL; Flags: Precursor gi|7225932|gb|AAF41120.1| competence lipoprotein ComL [Neisseria meningitidis MC58] gi|316983680|gb|EFV62661.1| competence lipoprotein comL [Neisseria meningitidis H44/76] gi|325200612|gb|ADY96067.1| competence lipoprotein comL [Neisseria meningitidis H44/76] Length = 267 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 115/260 (44%), Gaps = 14/260 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K LT+ +A L Q + D +T ++Y +A L N+++A + Sbjct: 1 MKKILLTVSLGLA---LSACATQGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + FP + A++S L +A+ Y + +A + + + +P+ N+DY YL G Sbjct: 57 LYEILESRFPTSRHAQQSQLDTAYAYYKDDEKDKALAAIDRFRRLHPQHPNMDYALYLRG 116 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + D +A + Q + +V+R+ NS Y A + + Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMVKLVDA 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A + Sbjct: 177 LGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYKKLDKPRLAAD 236 Query: 249 VVSLIQERYPQGYWARYVET 268 +++ +P+ + + Sbjct: 237 TRRVLETNFPKSPFLKQPWR 256 >gi|145589103|ref|YP_001155700.1| putative transmembrane protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047509|gb|ABP34136.1| putative transmembrane protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 295 Score = 268 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 14/249 (5%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 FAL + A+ L G + TD+ + ++Y +A + + +F+K +YF Sbjct: 30 FALLLAIIFALILLGGCAGSEGKKDD----TDIWPEAKLYSEATDKMNDADFAKCGKYFE 85 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + FPF ++++ + SA+ + A + QA + +I + S +DY YYL G+ Sbjct: 86 KLEARFPFGPYSQQAQINSAYCYWKAQEQAQALIAIDRFIKLHQGSPTLDYAYYLKGLIT 145 Query: 142 AQMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 D +A K + +V+R+ +S Y + + N LA Sbjct: 146 FNDDLGWLGNFTGQDLSERDPKAAKEAFESFKTVVDRFPDSKYAPDSLDRMRYIVNSLAE 205 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 +V + R+Y +RG Y+A+ R QLV+ +Y A EEA+ LV++Y L L + + Sbjct: 206 ADVNVARFYYQRGAYLASANRAQLVIRDYDRAPAVEEALYILVKSYEKLGLTQLSNDSAR 265 Query: 252 LIQERYPQG 260 + +P Sbjct: 266 VFALNFPDS 274 >gi|319943654|ref|ZP_08017935.1| competence lipoprotein ComL [Lautropia mirabilis ATCC 51599] gi|319742887|gb|EFV95293.1| competence lipoprotein ComL [Lautropia mirabilis ATCC 51599] Length = 359 Score = 268 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 102/249 (40%), Gaps = 16/249 (6%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + A L G T ++Y A L N++ A + + Sbjct: 55 LAVVAAGVLLAGCAATDKD------PTTNWTAEQLYADAKADLDAGNWTSAIKGMERLES 108 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM- 144 +PF A+++ L A+ Y G +A S + +I +P + +DY YYL G+ Sbjct: 109 RYPFGSYAQQAQLDIAWAHYKEGDRAEALSAIDRFIRLHPAHERLDYAYYLKGLVNFSNG 168 Query: 145 ---------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 D AT+ ++V R+ S Y + + + N +A+ EV Sbjct: 169 TGLIARWAGQDASERDLAATREAYDAFQQVVNRFPQSRYREDSIARMRSLVNSMASGEVH 228 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + R+YL RG YVA+ R Q VL++Y E+A+ L +Y L L D + V ++ Sbjct: 229 VARFYLSRGAYVASANRAQGVLSSYQGTPATEDALNILATSYDRLNLPDLRDDTVRVLAR 288 Query: 256 RYPQGYWAR 264 +PQ + + Sbjct: 289 TWPQSAYLK 297 >gi|74316827|ref|YP_314567.1| putative competence lipoprotein [Thiobacillus denitrificans ATCC 25259] gi|74056322|gb|AAZ96762.1| putative competence lipoprotein precursor [Thiobacillus denitrificans ATCC 25259] Length = 281 Score = 268 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 96/226 (42%), Gaps = 10/226 (4%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 + T +++Y +A L E N+ +A + F +PF A+++ L A+ Y Sbjct: 41 EVKDETTGWSAQKLYAEAKDNLNEGNYERAVKLFETLESRYPFGRYAQQAQLEVAYAYYK 100 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATK 156 + A + + +I +P NVDY YYL G++ D RA + Sbjct: 101 DNEPISAVAACDRFIKLHPNHPNVDYAYYLKGLANFNDDLGLLGNLVDQDMSERDPRAAR 160 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + R+ S Y A + N LA EV + +YYLKR YVAA R + V Sbjct: 161 DAFLAFKELATRFPQSIYAADATARMKYLVNALANNEVHVAKYYLKRKAYVAAANRAKEV 220 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 L Y +A EEA+A + +Y L L + + ++ +P + Sbjct: 221 LKTYPEAPALEEALAIMALSYDRLKLPELRDDARRVLTLNFPNSKY 266 >gi|77462668|ref|YP_352172.1| putative ComL lipoprotein [Rhodobacter sphaeroides 2.4.1] gi|77387086|gb|ABA78271.1| Putative ComL lipoprotein [Rhodobacter sphaeroides 2.4.1] Length = 278 Score = 268 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 76/253 (30%), Positives = 134/253 (52%), Gaps = 5/253 (1%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAY 77 + A + ++ V + G S ++ L++ T ++Y++ L+ + +A Sbjct: 2 VKSGARLLGTALCVALMAGCGGGSQKEPPLENFT----AEQIYQRGEYELEARTKPDRAI 57 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 YF++ R +P+ A+++L+M A+ + A Y++A + ++ YP ++ Y YL+ Sbjct: 58 RYFSEVERLYPYTEWAKRALIMQAYSYHKAKDYEEARGAAQRFLDFYPGDEDAAYAQYLL 117 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 +SY I +V DQ T LQ + ++E Y S Y + A + + LAAKE+EIG Sbjct: 118 ALSYYDQIDEVGRDQGLTFQALQALRVVIEDYPESEYAQSAILKFDLAFDHLAAKEMEIG 177 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 RYYLKRG Y AAI RF+ V+ ++ H EA+ RLVE+Y+AL L++EA+ +++ Y Sbjct: 178 RYYLKRGHYTAAINRFRTVVEDFQTTTHTAEALHRLVESYLALGLVNEAQTAGAILGHNY 237 Query: 258 PQGYWARYVETLV 270 + L+ Sbjct: 238 RSSPFYEDSYKLL 250 >gi|85708862|ref|ZP_01039928.1| DNA uptake lipoprotein [Erythrobacter sp. NAP1] gi|85690396|gb|EAQ30399.1| DNA uptake lipoprotein [Erythrobacter sp. NAP1] Length = 266 Score = 268 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 72/251 (28%), Positives = 120/251 (47%), Gaps = 3/251 (1%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + + L S+ + DV +Y +A L N + A Sbjct: 9 TRLTRAVLIGAGFATLAACGGGSAEEDVAYVARDVES---LYAEAQRRLDRGNTTLAAAL 65 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F++ R P++ AR++ LMSAF Y A Y +A + +++ +P +K+ Y YYL+ + Sbjct: 66 FDEVERQHPYSPWARRAQLMSAFCYYIARDYNKAIQNSQRFLSIHPGNKDAPYAYYLIAL 125 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 SY + I DV DQ T+ + + R+ + Y AR + + + LA KE+EIGR+ Sbjct: 126 SYYEQISDVNRDQSITEQAQIALREVNRRFPQTEYAADARLKLDLVADHLAGKEMEIGRF 185 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y + G ++AA RF+ V+ Y H EA+ RL E+ +AL + +EA + +++ YP Sbjct: 186 YQRSGRWLAAQLRFRNVVETYETTSHTPEALYRLTESSLALGIREEAVKYAAVLGANYPG 245 Query: 260 GYWARYVETLV 270 W LV Sbjct: 246 TEWYDKAYELV 256 >gi|123441244|ref|YP_001005231.1| outer membrane protein assembly complex subunit YfiO [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332160280|ref|YP_004296857.1| outer membrane protein assembly complex subunit YfiO [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|122088205|emb|CAL10993.1| putative lipoprotein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318604492|emb|CBY25990.1| putative component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Yersinia enterocolitica subsp. palearctica Y11] gi|325664510|gb|ADZ41154.1| outer membrane protein assembly complex subunit YfiO [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863601|emb|CBX73711.1| UPF0169 lipoprotein yfiO [Yersinia enterocolitica W22703] Length = 243 Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 107/248 (43%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + L G S++DV D+ E+Y A L++ NF A Sbjct: 1 MTRMKYLVAAATLSLVLTGCS--SNKDVVPDNPP-----SELYATAQQKLQDGNFKGAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y + A + + ++ P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRG 113 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + I D + K + +++++ Y NS Y A+ + +++ Sbjct: 114 LTDMALDDSALQGFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLMFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + +YY KRG YVA + R + +L +Y D + +A+ + AY L L +A + Sbjct: 174 LAKHELAVAQYYTKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLNAQADK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|238752928|ref|ZP_04614390.1| hypothetical protein yrohd0001_38840 [Yersinia rohdei ATCC 43380] gi|238708836|gb|EEQ01092.1| hypothetical protein yrohd0001_38840 [Yersinia rohdei ATCC 43380] Length = 240 Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats. Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 15/240 (6%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 + A LV S++DV D+ E+Y A L++ NF A Sbjct: 4 LVAAATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNR 58 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-- 144 +PF +++ L + Y + A + + ++ P N+DYV Y+ G++ + Sbjct: 59 YPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDD 118 Query: 145 --------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 I D + K + +++++ Y NS Y A+ + +++LA E+ + Sbjct: 119 SALQGFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLMFLKDRLAKHELAV 178 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +YY KRG YVA + R + +L +Y D + +A+ + AY L L EA +V +I Sbjct: 179 AQYYTKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLTAEADKVAKIIAAN 238 >gi|163732123|ref|ZP_02139569.1| competence lipoprotein ComL, putative [Roseobacter litoralis Och 149] gi|161394421|gb|EDQ18744.1| competence lipoprotein ComL, putative [Roseobacter litoralis Och 149] Length = 273 Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats. Identities = 73/245 (29%), Positives = 122/245 (49%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + IA C + + + +++E+ L A YF + R Sbjct: 1 MVVGIAGCTSDPGRTTGTFFNPQEVPLEAFEAEQIFERGEFELTRNRPDDAAFYFAEIER 60 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +P++ AR++L+M AF + Y + S + +I YP+ + Y YL+ +SY I Sbjct: 61 LYPYSDWARRALIMQAFSYHQDQDYPNSRSAAQRFIDFYPDDDDAAYAQYLLALSYYDQI 120 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 +V DQ T LQ + + +ERY +S Y + + + + LA KE+EIGRYYL+R Sbjct: 121 DEVGRDQGLTFQALQALRQTIERYPDSEYARASILKFDLAFDHLAGKEMEIGRYYLRRDH 180 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 + AAI RF++V+ ++ H EA+ RLVEAY++L L DEA+ +++ Y W + Sbjct: 181 FAAAINRFRVVVEDFQTTSHTPEALHRLVEAYLSLGLTDEAQTAGAILGYNYQSTIWYQD 240 Query: 266 VETLV 270 L+ Sbjct: 241 SFALL 245 >gi|238790741|ref|ZP_04634502.1| hypothetical protein yfred0001_15820 [Yersinia frederiksenii ATCC 33641] gi|238721182|gb|EEQ12861.1| hypothetical protein yfred0001_15820 [Yersinia frederiksenii ATCC 33641] Length = 240 Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 105/240 (43%), Gaps = 15/240 (6%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 + A LV S++DV D+ E+Y A L++ NF A Sbjct: 4 LVAAATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNR 58 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-- 144 +PF +++ L + Y + A + + ++ P N+DYV Y+ G++ + Sbjct: 59 YPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDD 118 Query: 145 --------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 I D + K + +++++ Y NS Y A+ + +++LA E+ + Sbjct: 119 SALQGFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLIFLKDRLAKHELAV 178 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +YY KRG YVA + R + +L +Y D + +A+ + AY L L +A +V +I Sbjct: 179 AQYYTKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLNAQADKVAKIIAAN 238 >gi|94501302|ref|ZP_01307823.1| competence lipoprotein ComL, putative [Oceanobacter sp. RED65] gi|94426573|gb|EAT11560.1| competence lipoprotein ComL, putative [Oceanobacter sp. RED65] Length = 291 Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats. Identities = 59/245 (24%), Positives = 110/245 (44%), Gaps = 16/245 (6%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + I + L R +R +Y+KA+ + +NF A E + Sbjct: 21 FLILLITIASLAACSSSGKR------PDQELSERGIYDKAMEAIGNENFFLAIETLERLE 74 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +PF + ++ L QY A + A + E +I +P+ VDY YY+ ++ ++ Sbjct: 75 NRYPFGKYSEQAQLEMIHAQYQAQDLENARATAERFIRLHPQHPKVDYAYYMKALTTYEL 134 Query: 145 ----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 + D + ++ +++R+ NS Y AR + R+++A E+ Sbjct: 135 GLSLVERYFADEESQRDPSPAQESFNELAELIKRFPNSEYAADARQRMIYLRDRIALHEI 194 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 + RYYLKR YVAA R + V+ N+ + ++ +A +VEAY L D A + + +++ Sbjct: 195 HVARYYLKRHAYVAAANRGRNVVENFQGTKQVDDGLAMMVEAYTLLGQKDLADKSLKVLK 254 Query: 255 ERYPQ 259 YP+ Sbjct: 255 ANYPE 259 >gi|319407495|emb|CBI81143.1| competence lipoprotein precursor [Bartonella sp. 1-1C] Length = 306 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 82/254 (32%), Positives = 129/254 (50%), Gaps = 2/254 (0%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDS-VTDVRYQREVYEKAVLFLKEQNFSKAY 77 + K + + CFL G + + V + +Y +A+ L S+A Sbjct: 28 VRKVLIGVLLG-GTCFLAGCLGKGKNILDPSMHVLKIDPPDVLYNQALANLDVGRLSEAA 86 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + F + + + RKSL+M AF Y KY A ++ + YI+ YP + + Y YY++ Sbjct: 87 KKFAIIEKQYAYTDWGRKSLIMGAFTNYRLAKYDDAIAMAQHYISLYPLADDSAYAYYII 146 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 G+S + I DV DQ+ TK + M ++ERY S YV A+ + GR QLA KE++IG Sbjct: 147 GLSSFRRIPDVTRDQQDTKRAIAAMQVLIERYPESEYVSDAKAKIRFGREQLAGKEMQIG 206 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 RYY + Y+AA RF+ V+ Y D EEA+ RL E AL L EA+ +++ Y Sbjct: 207 RYYEEGQRYLAASRRFRTVIEEYPDTNQIEEALFRLTEVNFALGLTMEAQTAAAILGRNY 266 Query: 258 PQGYWARYVETLVK 271 P+ W ++ L++ Sbjct: 267 PESKWYKFSYDLLQ 280 >gi|114798667|ref|YP_759117.1| putative competence lipoprotein ComL [Hyphomonas neptunium ATCC 15444] gi|114738841|gb|ABI76966.1| putative competence lipoprotein ComL [Hyphomonas neptunium ATCC 15444] Length = 277 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 72/252 (28%), Positives = 131/252 (51%), Gaps = 2/252 (0%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K +A L+ + R+ L V R ++Y + L +++++A Sbjct: 1 MPKLTPLPLVILAGALLITACSSTRRNPELAYVE--RPVEQLYNQGTDRLDRRDYTRAKL 58 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +F + R P++ AR++++MSA+ Y + Y + + E Y++ +P +Y YYL+ Sbjct: 59 FFEEVERQHPYSEWARRAMVMSAYASYRSRDYTTSITGAERYLSLHPGGSEAEYAYYLIA 118 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +++ I DV DQ T+ + ++ RY S Y + AR + + +QLA KE+ +GR Sbjct: 119 LNHFDQITDVGRDQATTESARNALLEVIRRYPESEYARDARVKLDMVNDQLAGKEMTVGR 178 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 +YL+ + +AA+ RF+ V+ +Y H+EEA+ RLVEAY+ L L D+A + + YP Sbjct: 179 WYLRSNQTLAAVNRFRKVVTDYQTTSHSEEALHRLVEAYLTLGLRDQAVVAGATLGHNYP 238 Query: 259 QGYWARYVETLV 270 W + L+ Sbjct: 239 GSDWYQMSYRLL 250 >gi|117621430|ref|YP_858499.1| ComL family lipoprotein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562837|gb|ABK39785.1| lipoprotein, ComL family [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 305 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 17/252 (6%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 K L + ++ + G S++ D + +Y+KA L L N+ A E Sbjct: 57 KKSHLLMSLALVATLITGCS--STKPKVPDEPPET-----LYQKARLKLDAGNYLNAIEL 109 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 +PF + + L + Y QA + + +I P KN+DYV+Y+ G+ Sbjct: 110 LEALDSRYPFGAYSNQVQLDLIYAYYKQDDTAQAIANIDRFIRLNPAHKNIDYVFYMRGL 169 Query: 140 SY----AQMIRDV------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + +D D + Q +++ Y NS Y AR + +N+L Sbjct: 170 TNMAGDYNFFQDFLGINRDDKDPSYARQAFQDFKTLLQNYPNSVYAADARARMIGLKNRL 229 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A ++ + YY+KR +AA R +L++ Y D E+A+ ++ +Y +L + A+ Sbjct: 230 ARYDLSVAEYYVKRDALIAAANRAKLIVETYPDTAETEKALEIMINSYDSLKMPTLAQHA 289 Query: 250 VSLIQERYPQGY 261 ++ + YP Sbjct: 290 REVLAKNYPDNR 301 >gi|157148107|ref|YP_001455426.1| outer membrane protein assembly complex subunit YfiO [Citrobacter koseri ATCC BAA-895] gi|157085312|gb|ABV14990.1| hypothetical protein CKO_03917 [Citrobacter koseri ATCC BAA-895] Length = 245 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 99/248 (39%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY RG +VA + R + +L ++ D + +A+ + AY + + +A + Sbjct: 174 LAKYEYSVADYYTARGAWVAVVNRVEGMLRDFPDTQATRDALPLMENAYRQMQMTTQADK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|288934029|ref|YP_003438088.1| outer membrane assembly lipoprotein YfiO [Klebsiella variicola At-22] gi|288888758|gb|ADC57076.1| outer membrane assembly lipoprotein YfiO [Klebsiella variicola At-22] Length = 245 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 101/255 (39%), Gaps = 20/255 (7%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 ++ S+A+ G S++ D+ E+Y A L++ N+ + Sbjct: 1 MTRMKYLVAAATLSLALVGCSG-----SKEEVPDNPP-----NEIYATAQQKLQDGNWKQ 50 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A +PF +++ L + Y A + + ++ P N+DYV Y Sbjct: 51 AITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIY 110 Query: 136 LVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G++ + D + + S++V Y NS Y A + Sbjct: 111 MRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRGYPNSQYATDAFKRMVFL 170 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 +++LA E+ + YY RG +VA + R + ++ NY D + +A+ ++ AY + + + Sbjct: 171 KDRLAKYELSVVDYYTDRGAWVAVVNRVEGMMRNYPDTQATRDALPKMENAYRQMQMNAQ 230 Query: 246 AREVVSLIQERYPQG 260 A +V +I Sbjct: 231 ADKVAKIIAANSKNT 245 >gi|317049250|ref|YP_004116898.1| outer membrane assembly lipoprotein YfiO [Pantoea sp. At-9b] gi|316950867|gb|ADU70342.1| outer membrane assembly lipoprotein YfiO [Pantoea sp. At-9b] Length = 243 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 20/252 (7%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 ++ S+A+ G S+D DS E+Y A L++ NF Sbjct: 1 MTRMKHLVAAATLSLALVGCSG-----SKDTVPDSPP-----SEIYATAQQKLQDGNFKA 50 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + +PF +++ L + Y A + ++ P N+DYV Y Sbjct: 51 AIKQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIARFMRLNPTHPNIDYVIY 110 Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G++ + I D + + S+++ Y NS Y A+ + Sbjct: 111 MKGLTDMALDDSALQGFFGIDRSDRDPTHARDAFRDFSQLLRGYPNSQYAADAQKRLVFL 170 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 + +LA E+ + ++Y KRG YVA + R + ++ +Y D + EA+ + AY L L E Sbjct: 171 KERLAKYELSVAQFYTKRGAYVAVVNRVEGMMKDYPDTQATHEALPLMENAYRQLQLTAE 230 Query: 246 AREVVSLIQERY 257 A +V +I + Sbjct: 231 ADKVAKIIAANH 242 >gi|209545278|ref|YP_002277507.1| outer membrane assembly lipoprotein YfiO [Gluconacetobacter diazotrophicus PAl 5] gi|209532955|gb|ACI52892.1| outer membrane assembly lipoprotein YfiO [Gluconacetobacter diazotrophicus PAl 5] Length = 319 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 66/249 (26%), Positives = 123/249 (49%), Gaps = 7/249 (2%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 +L + S+A C + D + V +Y + L++Q ++ A F Sbjct: 24 SLALILSVAACG-------GDKKAINDMESHVPPVETLYNNGIDALRDQRYALAAAEFEV 76 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +++P++G + LM + Y KY A + ++ +P S + Y +YL + Y Sbjct: 77 LQQNYPYSGYVANAQLMEGYANYLQDKYADAVQQLDRFLELHPTSADAAYAFYLRALCYY 136 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + + +V DQ+ T + + ++ R+ SPY + A+ V + R+ LA KE+ +GR+Y + Sbjct: 137 EQVAEVQRDQQGTVEAMNALEEVITRFPQSPYARDAQLKVDLCRDHLAGKEMLVGRFYEE 196 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + Y A+ R+Q V+ ++ H EA+ RLVE Y+ L L D+AR S++ YP W Sbjct: 197 QRNYEGAVNRYQRVVQDFQTTNHVPEALERLVEVYLDLGLTDQARRTASVLSYNYPGSKW 256 Query: 263 ARYVETLVK 271 R+ +++ Sbjct: 257 YRFSYNMLR 265 >gi|239787476|emb|CAX83947.1| DNA uptake lipoprotein-like protein precursor [uncultured bacterium] Length = 289 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 66/248 (26%), Positives = 122/248 (49%), Gaps = 9/248 (3%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 I + + L G +V L +Y + V +++ F A + F + R Sbjct: 9 IAVAGLMILLAGCSSTPEEEVTLP-------PEVLYRQGVQAIQKNRFPVAVKRFQEVDR 61 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 PF+ A ++ L + Y +Y++A S E ++ +P +V Y YY++ +++ + I Sbjct: 62 KHPFSPWAVRAQLNLIYAHYMDEEYEEALSAAERFVRLHPRHPHVAYPYYMLALAHYKRI 121 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 D DQ TK ++ R+ +S Y + AR + + R++LAA+EV +GR+YL R + Sbjct: 122 ADPLRDQGHTKQAEVAFRELIARFPDSDYAEEARRMLELCRDRLAAQEVVVGRFYLDRDQ 181 Query: 206 YVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 Y+AA RF+ V+ N ++ + EEA+ LV + + L L EA +++ Y G + Sbjct: 182 YIAATNRFRRVVENQDFNRTPYVEEALFGLVMSSLKLGLPQEALTYAAVLGHNYADGPFY 241 Query: 264 RYVETLVK 271 + +V+ Sbjct: 242 PHARAMVE 249 >gi|302185254|ref|ZP_07261927.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. syringae 642] Length = 340 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 14/229 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 18 CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150 + Y G+ + A S E +I +P+ NVDY YY+ G++ Sbjct: 74 IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|300703939|ref|YP_003745541.1| lipoprotein [Ralstonia solanacearum CFBP2957] gi|299071602|emb|CBJ42926.1| putative lipoprotein, ComL family, tetratricopeptide repeats (TPR) domain [Ralstonia solanacearum CFBP2957] Length = 277 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 59/255 (23%), Positives = 109/255 (42%), Gaps = 14/255 (5%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + + +A + + T ++Y +A L ++SKA +Y+ Sbjct: 14 RIGAVMAAGVACLAISACGIMPEQQDE----TAGWSANKLYSEAKDALDGGDYSKAVKYY 69 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + +PF A+++ + +A+ Y G+ A + + +I +P +VDY YYL G+ Sbjct: 70 EKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLKGLI 129 Query: 141 YAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 D +A + ++ R+ NS Y A + N +A Sbjct: 130 NFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLITRFPNSKYTPDAAQRMQYIVNAMA 189 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 EV+ RYY +RG Y+AA R Q + +Y A EEA+ ++++Y AL + D + Sbjct: 190 EHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVEEALYIMMKSYEALGMKDLRDDTE 249 Query: 251 SLIQERYPQGYWARY 265 +I++ YP + Y Sbjct: 250 RIIKQNYPNSNFILY 264 >gi|85374273|ref|YP_458335.1| DNA uptake lipoprotein [Erythrobacter litoralis HTCC2594] gi|84787356|gb|ABC63538.1| DNA uptake lipoprotein [Erythrobacter litoralis HTCC2594] Length = 266 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 70/222 (31%), Positives = 117/222 (52%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D+ R +Y A L N A F++ R P++ AR++ LMSAF Y + Sbjct: 35 DTAYVARDVETLYASAKDRLDRGNAKLAAALFDEVERQHPYSPWARRAQLMSAFSYYVSR 94 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 Y +A + +++ +P +K+ Y YYL+ +SY + I DV DQ+ T+ L + + R Sbjct: 95 DYTKAIQSAQRFLSIHPGNKDAPYAYYLIALSYYEQISDVQRDQKVTEQALTALREVDRR 154 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + + Y AR + + + LA KE+EIGR+Y + ++ AA+ RFQ V+ +Y HA E Sbjct: 155 FPQTEYAADARLKMDLVNDHLAGKEMEIGRFYQRTAKWAAAVIRFQNVVDDYQTTSHAPE 214 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 A+ RL E+ +AL + EA++ +++ YP W L+ Sbjct: 215 ALYRLTESNLALGIPTEAKKYAAVLGANYPGSEWYEKAYELI 256 >gi|308187866|ref|YP_003931997.1| UPF0169 lipoprotein yfiO precursor [Pantoea vagans C9-1] gi|308058376|gb|ADO10548.1| putative UPF0169 lipoprotein yfiO precursor [Pantoea vagans C9-1] Length = 274 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 101/251 (40%), Gaps = 20/251 (7%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 ++ S+A+ G S D DS E+Y A L++ NF Sbjct: 32 MTRMKHLVAAATLSLALVGCSG-----SNDAVPDSPP-----SEIYATAQQKLQDGNFKA 81 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + +PF +++ L + Y A + ++ P N+DYV Y Sbjct: 82 AIKQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIARFMRLNPTHPNIDYVIY 141 Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G++ + I D + + S+++ Y NS Y A+ + Sbjct: 142 MKGLTDMALDDSALQGFFGIDRSDRDPTHARDAFRDFSQLLRSYPNSQYAADAQKRLVYL 201 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 +++LA E+ + ++Y KR YVA + R + ++ +Y D + +A+ + AY L L E Sbjct: 202 KDRLAKYELSVAQFYTKREAYVAVVNRVEGMMRDYPDTQATHDALPLMENAYRNLQLNAE 261 Query: 246 AREVVSLIQER 256 A +V +I Sbjct: 262 ADKVAKIIAAN 272 >gi|207743016|ref|YP_002259408.1| dna uptake lipoprotein [Ralstonia solanacearum IPO1609] gi|206594413|emb|CAQ61340.1| dna uptake lipoprotein [Ralstonia solanacearum IPO1609] Length = 277 Score = 267 bits (684), Expect = 9e-70, Method: Composition-based stats. Identities = 59/255 (23%), Positives = 109/255 (42%), Gaps = 14/255 (5%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + + +A + + T ++Y +A L ++SKA +Y+ Sbjct: 14 RIGAVMAAGVACLAISACGIMPEQQDE----TAGWSANKLYSEAKDALDGGDYSKAVKYY 69 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + +PF A+++ + +A+ Y G+ A + + +I +P +VDY YYL G+ Sbjct: 70 EKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLKGLI 129 Query: 141 YAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 D +A + ++ R+ NS Y A + N +A Sbjct: 130 NFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLITRFPNSKYTPDAAQRMQYIVNAMA 189 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 EV+ RYY +RG Y+AA R Q + +Y A EEA+ ++++Y AL + D + Sbjct: 190 EHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVEEALYIMMKSYEALGMKDLRDDTE 249 Query: 251 SLIQERYPQGYWARY 265 +I++ YP + Y Sbjct: 250 RIIKQNYPNSNFMLY 264 >gi|293411986|ref|ZP_06654709.1| conserved hypothetical protein [Escherichia coli B354] gi|331664162|ref|ZP_08365071.1| putative lipoprotein [Escherichia coli TA143] gi|291468757|gb|EFF11248.1| conserved hypothetical protein [Escherichia coli B354] gi|331058619|gb|EGI30597.1| putative lipoprotein [Escherichia coli TA143] Length = 245 Score = 267 bits (684), Expect = 9e-70, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 101/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + +YY +RG +VA + R + +L +Y D + +A+ + AY + + +A + Sbjct: 174 LAKYEYSVAKYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|238756472|ref|ZP_04617779.1| hypothetical protein yruck0001_32310 [Yersinia ruckeri ATCC 29473] gi|238705321|gb|EEP97731.1| hypothetical protein yruck0001_32310 [Yersinia ruckeri ATCC 29473] Length = 243 Score = 267 bits (684), Expect = 9e-70, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 105/248 (42%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + L G S++DV D+ E+Y A L++ NF A Sbjct: 1 MTRMKYLVAAATLSLVLTGCS--SNKDVVPDNPP-----SELYATAQQKLQDGNFKGAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y + A + + ++ P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRG 113 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + I D + K + +++++ + NS Y A+ + +N+ Sbjct: 114 LTDMALDDSALQGFFGIDRSDRDPQHAKAAFRDFNQLIQSHPNSQYATDAQKRLVYLKNR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + YY KRG YVA I R + ++ +Y + +A+ + AY + L +A + Sbjct: 174 LAKHELAVAEYYTKRGAYVAVINRVEQMMRDYPGTQATRDALPLMENAYKQIQLNAQADK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VNKVIAAN 241 >gi|194435121|ref|ZP_03067357.1| outer membrane assembly lipoprotein YfiO [Shigella dysenteriae 1012] gi|194416652|gb|EDX32785.1| outer membrane assembly lipoprotein YfiO [Shigella dysenteriae 1012] gi|332089242|gb|EGI94349.1| outer membrane assembly lipoprotein YfiO [Shigella dysenteriae 155-74] Length = 245 Score = 267 bits (684), Expect = 9e-70, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 101/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + ++ S++V Y NS Y A + +N+ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARVAFSDFSKLVRGYPNSQYTTDATKRLVFLKNR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A + Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQINAQAEK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|59800727|ref|YP_207439.1| ComL [Neisseria gonorrhoeae FA 1090] gi|194097999|ref|YP_002001047.1| ComL, competence lipoprotein [Neisseria gonorrhoeae NCCP11945] gi|239998465|ref|ZP_04718389.1| ComL, competence lipoprotein [Neisseria gonorrhoeae 35/02] gi|240013590|ref|ZP_04720503.1| ComL, competence lipoprotein [Neisseria gonorrhoeae DGI18] gi|240016029|ref|ZP_04722569.1| ComL, competence lipoprotein [Neisseria gonorrhoeae FA6140] gi|240080170|ref|ZP_04724713.1| ComL, competence lipoprotein [Neisseria gonorrhoeae FA19] gi|240112384|ref|ZP_04726874.1| ComL, competence lipoprotein [Neisseria gonorrhoeae MS11] gi|240115124|ref|ZP_04729186.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID18] gi|240117407|ref|ZP_04731469.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID1] gi|240120660|ref|ZP_04733622.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID24-1] gi|240122964|ref|ZP_04735920.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID332] gi|240125215|ref|ZP_04738101.1| ComL, competence lipoprotein [Neisseria gonorrhoeae SK-92-679] gi|240127669|ref|ZP_04740330.1| ComL, competence lipoprotein [Neisseria gonorrhoeae SK-93-1035] gi|254493185|ref|ZP_05106356.1| competence lipoprotein comL [Neisseria gonorrhoeae 1291] gi|260441059|ref|ZP_05794875.1| ComL, competence lipoprotein [Neisseria gonorrhoeae DGI2] gi|268594326|ref|ZP_06128493.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae 35/02] gi|268596321|ref|ZP_06130488.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae FA19] gi|268598445|ref|ZP_06132612.1| competence lipoprotein comL [Neisseria gonorrhoeae MS11] gi|268600799|ref|ZP_06134966.1| competence lipoprotein comL [Neisseria gonorrhoeae PID18] gi|268603104|ref|ZP_06137271.1| competence lipoprotein comL [Neisseria gonorrhoeae PID1] gi|268681585|ref|ZP_06148447.1| competence lipoprotein comL [Neisseria gonorrhoeae PID332] gi|268683813|ref|ZP_06150675.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-92-679] gi|268686055|ref|ZP_06152917.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-93-1035] gi|291044391|ref|ZP_06570100.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae DGI2] gi|293399572|ref|ZP_06643725.1| lipoprotein [Neisseria gonorrhoeae F62] gi|5921830|sp|Q50985|COML_NEIGO RecName: Full=Competence lipoprotein ComL; Flags: Precursor gi|1107833|emb|CAA90076.1| ComL, competence lipoprotein [Neisseria gonorrhoeae] gi|59717622|gb|AAW89027.1| competence lipoprotein [Neisseria gonorrhoeae FA 1090] gi|193933289|gb|ACF29113.1| ComL, competence lipoprotein [Neisseria gonorrhoeae NCCP11945] gi|226512225|gb|EEH61570.1| competence lipoprotein comL [Neisseria gonorrhoeae 1291] gi|268547715|gb|EEZ43133.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae 35/02] gi|268550109|gb|EEZ45128.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae FA19] gi|268582576|gb|EEZ47252.1| competence lipoprotein comL [Neisseria gonorrhoeae MS11] gi|268584930|gb|EEZ49606.1| competence lipoprotein comL [Neisseria gonorrhoeae PID18] gi|268587235|gb|EEZ51911.1| competence lipoprotein comL [Neisseria gonorrhoeae PID1] gi|268621869|gb|EEZ54269.1| competence lipoprotein comL [Neisseria gonorrhoeae PID332] gi|268624097|gb|EEZ56497.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-92-679] gi|268626339|gb|EEZ58739.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-93-1035] gi|291011285|gb|EFE03281.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae DGI2] gi|291610141|gb|EFF39263.1| lipoprotein [Neisseria gonorrhoeae F62] gi|317163747|gb|ADV07288.1| ComL [Neisseria gonorrhoeae TCDC-NG08107] gi|1588996|prf||2209423A lipoprotein Length = 267 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 115/259 (44%), Gaps = 14/259 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K LT+ +A L Q + D +T ++Y +A L N+++A + Sbjct: 1 MKKILLTVSLGLA---LSACATQGTADKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + FP + AR+S L +A+ Y + +A + E + +P+ N+DY YL G Sbjct: 57 LYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALYLRG 116 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + D +A + Q + +V+R+ NS Y A + + Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMVKLVDA 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ + RYY+KRG Y+AA R + ++ +Y + + EE++A L AY L A + Sbjct: 177 LGGNEMSVARYYMKRGAYIAAANRAKKIIGSYQNTRYVEESLAILELAYKKLDKPQLAAD 236 Query: 249 VVSLIQERYPQGYWARYVE 267 +++ +P+ + + Sbjct: 237 TRRVLETNFPKSPFLTHAW 255 >gi|261342025|ref|ZP_05969883.1| competence lipoprotein ComL [Enterobacter cancerogenus ATCC 35316] gi|288315681|gb|EFC54619.1| competence lipoprotein ComL [Enterobacter cancerogenus ATCC 35316] Length = 245 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 99/251 (39%), Gaps = 20/251 (7%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 ++ S+A+ G S + D+ E+Y A L++ N+ + Sbjct: 1 MTRMKYLVAAATLSLALVGCSG-----SNEQVPDNPP-----NEIYATAQQKLQDGNWKQ 50 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A +PF +++ L + Y A + + ++ P N+DYV Y Sbjct: 51 AITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQATIDRFMRLNPTHPNIDYVMY 110 Query: 136 LVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G++ + D + + S++V Y NS Y+ A + Sbjct: 111 MRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRGYPNSQYITDATKRLVFL 170 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 +++LA E + YY +RG +VA + R + +L +Y D + + + + AY + + + Sbjct: 171 KDRLAKYEYSVAEYYTRRGAWVAVVNRVEGMLRDYPDTQATRDGLKLMENAYRQMQMTGQ 230 Query: 246 AREVVSLIQER 256 A +V +I Sbjct: 231 AEKVAKIIAAN 241 >gi|82778019|ref|YP_404368.1| outer membrane protein assembly complex subunit YfiO [Shigella dysenteriae Sd197] gi|309789451|ref|ZP_07684037.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|81242167|gb|ABB62877.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gi|308922694|gb|EFP68215.1| conserved hypothetical protein [Shigella dysenteriae 1617] Length = 245 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY +RG +VA + R + +L NY D + +A+ + AY + + +A + Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQMNAQAEK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|114327085|ref|YP_744242.1| ComL family lipoprotein [Granulibacter bethesdensis CGDNIH1] gi|114315259|gb|ABI61319.1| lipoprotein, ComL family [Granulibacter bethesdensis CGDNIH1] Length = 317 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 73/262 (27%), Positives = 126/262 (48%) Query: 7 RAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66 +++ + ++ K A I ++ + L S D E+Y V Sbjct: 24 QSVSMVLLSSFARAKAARRIGAALLLPLLASGCGSSKDDELAKLDPAKMSVEELYNTGVD 83 Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 +++ ++ A + F+ + +P++ A + LM + QY KY A + +I +P Sbjct: 84 AMQDHRYTTAAQQFDAVQQYYPYSSWAANAQLMQGYSQYLEHKYMDAIGSLDRFIQLHPT 143 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 K++ Y YYL +S+ + I D+ DQ+ T+ + + +V R+ +S Y + AR + + R Sbjct: 144 HKDIAYAYYLRALSFYEQIADIQRDQKGTEDAMTALQEVVSRFPDSGYARDARLKIDLCR 203 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 + LA KE+EIGRYY + Y AAI RFQ V+ Y H EA+ RL E Y+ L L +A Sbjct: 204 DHLAGKEMEIGRYYEREHLYAAAINRFQTVVKEYQTTNHVPEALHRLTELYLLLGLRSDA 263 Query: 247 REVVSLIQERYPQGYWARYVET 268 R +++ YP W + Sbjct: 264 RRTAAVLGHNYPGSSWYQSSWD 285 >gi|82545048|ref|YP_408995.1| outer membrane protein assembly complex subunit YfiO [Shigella boydii Sb227] gi|81246459|gb|ABB67167.1| conserved hypothetical protein [Shigella boydii Sb227] gi|332092137|gb|EGI97215.1| outer membrane assembly lipoprotein YfiO [Shigella boydii 3594-74] Length = 245 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY +RG +VA + R + +L +Y D + +A+ + +Y + + +A + Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENSYRQMQMNAQAEK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|296104264|ref|YP_003614410.1| putative lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058723|gb|ADF63461.1| putative lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 245 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 99/251 (39%), Gaps = 20/251 (7%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 ++ S+A+ G S + D+ E+Y A L++ N+ + Sbjct: 1 MTRMKYLVAAATLSLALVGCSG-----SNEQVPDNPP-----NEIYATAQQKLQDGNWKQ 50 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A +PF +++ L + Y A + + ++ P N+DYV Y Sbjct: 51 AITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQATIDRFMRLNPTHPNIDYVMY 110 Query: 136 LVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G++ + D + + S++V Y NS YV A + Sbjct: 111 MRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRGYPNSQYVTDATKRLVFL 170 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 +++LA E + YY +RG +VA + R + +L +Y D + + + + AY + + + Sbjct: 171 KDRLAKYEYSVAEYYTRRGAWVAVVNRVEGMLRDYPDTQATRDGLKLMENAYRQMQMTAQ 230 Query: 246 AREVVSLIQER 256 A +V +I Sbjct: 231 ADKVAKIIAAN 241 >gi|238785832|ref|ZP_04629801.1| hypothetical protein yberc0001_12680 [Yersinia bercovieri ATCC 43970] gi|238798953|ref|ZP_04642416.1| hypothetical protein ymoll0001_9580 [Yersinia mollaretii ATCC 43969] gi|238713245|gb|EEQ05288.1| hypothetical protein yberc0001_12680 [Yersinia bercovieri ATCC 43970] gi|238717182|gb|EEQ09035.1| hypothetical protein ymoll0001_9580 [Yersinia mollaretii ATCC 43969] Length = 240 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 15/240 (6%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 + A LV S++DV D+ E+Y A L++ NF A Sbjct: 4 LVAAATLSLVLTGCSSNKDVVPDNPP-----SELYATAQQKLQDGNFKGAITQLEALDNR 58 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-- 144 +PF +++ L + Y + A + + ++ P N+DYV Y+ G++ + Sbjct: 59 YPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDD 118 Query: 145 --------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 I D + K + S++++ Y NS Y A+ + +++LA E+ + Sbjct: 119 SALQGFFGIDRSDRDPQHAKAAFRDFSQLIQSYPNSQYATDAQKRLMFLKDRLAKHELAV 178 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +YY KRG YVA + R + +L +Y D + +A+ + AY L L +A +V +I Sbjct: 179 AQYYTKRGAYVAVVNRVEQMLRDYPDTKATRDALPLMENAYKQLQLNAQADKVAKIIAAN 238 >gi|237801869|ref|ZP_04590330.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024727|gb|EGI04783.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. oryzae str. 1_6] Length = 340 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 14/229 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 18 CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150 + Y G+ + A S E +I +P+ NVDY YY+ G++ Sbjct: 74 IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|307824792|ref|ZP_07655015.1| outer membrane assembly lipoprotein YfiO [Methylobacter tundripaludum SV96] gi|307734150|gb|EFO05004.1| outer membrane assembly lipoprotein YfiO [Methylobacter tundripaludum SV96] Length = 279 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 99/253 (39%), Gaps = 10/253 (3%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 L KF +++ + S D + + +A L N+ KA + Sbjct: 5 LIKFLFICCLGLSLQGCETLKSLGSGDSDTEDEYADWNAEKFRGQAKTALDAGNYDKAIK 64 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + +PF + ++ L A+ Y + A + + +I P S +VDY YYL G Sbjct: 65 LYEALESRYPFGDESAQTQLDIAYAYYKNSDPEAAIAAADRFIKINPRSSSVDYAYYLKG 124 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + D + + + R+ NS Y+ A+ + +N Sbjct: 125 LVNYNRGIGFIDRFLPTDTSQRDPGTARDAYDNFAELTRRFPNSKYIADAQQRMIELKNN 184 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA EV + R+Y+KR YVAAI R V+ Y A+ + EAY L L D A++ Sbjct: 185 LAMYEVHVARFYMKRKAYVAAINRASTVVDKYQRTPAVPYALQIMQEAYTKLELPDLAKD 244 Query: 249 VVSLIQERYPQGY 261 + + YP G Sbjct: 245 TTRVYELNYPNGP 257 >gi|331684251|ref|ZP_08384843.1| putative lipoprotein [Escherichia coli H299] gi|331077866|gb|EGI49072.1| putative lipoprotein [Escherichia coli H299] Length = 245 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + L +A + Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQLNAQAEK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|152971445|ref|YP_001336554.1| outer membrane protein assembly complex subunit YfiO [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206576804|ref|YP_002237067.1| outer membrane assembly lipoprotein YfiO [Klebsiella pneumoniae 342] gi|238896041|ref|YP_002920777.1| outer membrane protein assembly complex subunit YfiO [Klebsiella pneumoniae NTUH-K2044] gi|262043839|ref|ZP_06016929.1| competence lipoprotein ComL [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|290510911|ref|ZP_06550280.1| lipoprotein [Klebsiella sp. 1_1_55] gi|330012969|ref|ZP_08307539.1| outer membrane assembly lipoprotein YfiO [Klebsiella sp. MS 92-3] gi|150956294|gb|ABR78324.1| putative lipoprotein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206565862|gb|ACI07638.1| outer membrane assembly lipoprotein YfiO [Klebsiella pneumoniae 342] gi|238548359|dbj|BAH64710.1| putative lipoprotein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259038809|gb|EEW39990.1| competence lipoprotein ComL [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|289775904|gb|EFD83903.1| lipoprotein [Klebsiella sp. 1_1_55] gi|328533635|gb|EGF60347.1| outer membrane assembly lipoprotein YfiO [Klebsiella sp. MS 92-3] Length = 245 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 101/255 (39%), Gaps = 20/255 (7%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 ++ S+A+ G S++ D+ E+Y A L++ N+ + Sbjct: 1 MTRMKYLVAAATLSLALVGCSG-----SKEEVPDNPP-----NEIYATAQQKLQDGNWKQ 50 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A +PF +++ L + Y A + + ++ P N+DYV Y Sbjct: 51 AITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIY 110 Query: 136 LVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G++ + D + + S++V Y NS Y A + Sbjct: 111 MRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRGYPNSQYATDAYKRMVFL 170 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 +++LA E+ + YY RG +VA + R + ++ NY D + +A+ ++ AY + + + Sbjct: 171 KDRLAKYELSVVDYYTDRGAWVAVVNRVEGMMRNYPDTQATRDALPKMENAYRQMQMNAQ 230 Query: 246 AREVVSLIQERYPQG 260 A +V +I Sbjct: 231 ADKVAKIIAANSKNT 245 >gi|170765615|ref|ZP_02900426.1| outer membrane assembly lipoprotein YfiO [Escherichia albertii TW07627] gi|170124761|gb|EDS93692.1| outer membrane assembly lipoprotein YfiO [Escherichia albertii TW07627] Length = 245 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRGYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A + Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|323159116|gb|EFZ45109.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E128010] Length = 245 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A + Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGILRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|114561851|ref|YP_749364.1| putative lipoprotein [Shewanella frigidimarina NCIMB 400] gi|114333144|gb|ABI70526.1| putative lipoprotein [Shewanella frigidimarina NCIMB 400] Length = 253 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 96/253 (37%), Gaps = 14/253 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +YK A + + D V +Y +A ++ N+SKA Sbjct: 1 MYKIAKGAALVLLSLAITACSSSPEDD----DVASKASPDVLYSQARTSMELGNYSKAVR 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 FPF + L F Y + + ++ P N+DYVYY+ G Sbjct: 57 SLEALDSRFPFGPHKTQVQLDLIFAYYKMDDAASGLANIDRFLRLNPTHPNIDYVYYMRG 116 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ Q I D + + + R+++ Y NS Y A+ + +N+ Sbjct: 117 LTNMQADNYLFHDLMNIDRTDRDPKNAQDAFKDFDRLIKSYPNSKYSADAQQRMQFLKNR 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA +++ YY+K + AA R Q V+ + E A+ +V+AY L + Sbjct: 177 LAKYSIQVAEYYIKMNAWSAAAVRAQSVMEKFPGTPSTERALEIMVKAYGELGQEKLQQN 236 Query: 249 VVSLIQERYPQGY 261 V ++++ +P Sbjct: 237 VKTVMKANFPTNE 249 >gi|330962680|gb|EGH62940.1| competence lipoprotein ComL [Pseudomonas syringae pv. maculicola str. ES4326] Length = 340 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 14/229 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 18 CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150 + Y G+ + A S E +I +P+ NVDY YY+ G++ Sbjct: 74 IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D A + +++ RY NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 134 DPGAARDSFNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|162148968|ref|YP_001603429.1| hypothetical protein GDI_3198 [Gluconacetobacter diazotrophicus PAl 5] gi|161787545|emb|CAP57141.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus PAl 5] Length = 319 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 65/249 (26%), Positives = 123/249 (49%), Gaps = 7/249 (2%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 +L + ++A C + D + V +Y + L++Q ++ A F Sbjct: 24 SLALILAVAACG-------GDKKAINDMESHVPPVETLYNNGIDALRDQRYALAAAEFEV 76 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +++P++G + LM + Y KY A + ++ +P S + Y +YL + Y Sbjct: 77 LQQNYPYSGYVANAQLMEGYANYLQDKYADAVQQLDRFLELHPTSADAAYAFYLRALCYY 136 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + + +V DQ+ T + + ++ R+ SPY + A+ V + R+ LA KE+ +GR+Y + Sbjct: 137 EQVAEVQRDQQGTVEAMNALEEVITRFPQSPYARDAQLKVDLCRDHLAGKEMLVGRFYEE 196 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + Y A+ R+Q V+ ++ H EA+ RLVE Y+ L L D+AR S++ YP W Sbjct: 197 QRNYEGAVNRYQRVVQDFQTTNHVPEALERLVEVYLDLGLTDQARRTASVLSYNYPGSKW 256 Query: 263 ARYVETLVK 271 R+ +++ Sbjct: 257 YRFSYNMLR 265 >gi|15803119|ref|NP_289150.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli O157:H7 EDL933] gi|15832712|ref|NP_311485.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli O157:H7 str. Sakai] gi|16130516|ref|NP_417086.1| lipoprotein required for OM biogenesis, in BamABCD complex [Escherichia coli str. K-12 substr. MG1655] gi|26248958|ref|NP_754998.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli CFT073] gi|74313154|ref|YP_311573.1| outer membrane protein assembly complex subunit YfiO [Shigella sonnei Ss046] gi|89109397|ref|AP_003177.1| predicted lipoprotein [Escherichia coli str. K-12 substr. W3110] gi|91211929|ref|YP_541915.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli UTI89] gi|117624819|ref|YP_853732.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli APEC O1] gi|157155227|ref|YP_001463916.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli E24377A] gi|157162071|ref|YP_001459389.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli HS] gi|168752064|ref|ZP_02777086.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4113] gi|168758665|ref|ZP_02783672.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4401] gi|168762388|ref|ZP_02787395.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4501] gi|168771701|ref|ZP_02796708.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4486] gi|168773477|ref|ZP_02798484.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4196] gi|168789498|ref|ZP_02814505.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC869] gi|168801713|ref|ZP_02826720.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC508] gi|170019126|ref|YP_001724080.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli ATCC 8739] gi|170082200|ref|YP_001731520.1| lipoprotein [Escherichia coli str. K-12 substr. DH10B] gi|170682905|ref|YP_001744780.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli SMS-3-5] gi|187732232|ref|YP_001881383.1| outer membrane protein assembly complex subunit YfiO [Shigella boydii CDC 3083-94] gi|188492325|ref|ZP_02999595.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 53638] gi|191169057|ref|ZP_03030820.1| outer membrane assembly lipoprotein YfiO [Escherichia coli B7A] gi|193064045|ref|ZP_03045130.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E22] gi|193071696|ref|ZP_03052597.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E110019] gi|194430166|ref|ZP_03062667.1| outer membrane assembly lipoprotein YfiO [Escherichia coli B171] gi|194439383|ref|ZP_03071461.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 101-1] gi|195940190|ref|ZP_03085572.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli O157:H7 str. EC4024] gi|208807425|ref|ZP_03249762.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4206] gi|208813580|ref|ZP_03254909.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4045] gi|208818633|ref|ZP_03258953.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4042] gi|209395708|ref|YP_002272068.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4115] gi|209920072|ref|YP_002294156.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli SE11] gi|215487934|ref|YP_002330365.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli O127:H6 str. E2348/69] gi|217327021|ref|ZP_03443104.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. TW14588] gi|218555175|ref|YP_002388088.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli IAI1] gi|218559516|ref|YP_002392429.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli S88] gi|218690714|ref|YP_002398926.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli ED1a] gi|218696220|ref|YP_002403887.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli 55989] gi|218701107|ref|YP_002408736.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli IAI39] gi|218706097|ref|YP_002413616.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli UMN026] gi|227888162|ref|ZP_04005967.1| DNA uptake lipoprotein ComL [Escherichia coli 83972] gi|237706816|ref|ZP_04537297.1| outer membrane protein assembly complex subunit YfiO [Escherichia sp. 3_2_53FAA] gi|238901756|ref|YP_002927552.1| putative lipoprotein [Escherichia coli BW2952] gi|253772509|ref|YP_003035340.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254037672|ref|ZP_04871730.1| outer membrane assembly lipoprotein YfiO [Escherichia sp. 1_1_43] gi|254162566|ref|YP_003045674.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli B str. REL606] gi|254794543|ref|YP_003079380.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli O157:H7 str. TW14359] gi|256019584|ref|ZP_05433449.1| outer membrane protein assembly complex subunit YfiO [Shigella sp. D9] gi|256024876|ref|ZP_05438741.1| outer membrane protein assembly complex subunit YfiO [Escherichia sp. 4_1_40B] gi|260845277|ref|YP_003223055.1| putative lipoprotein [Escherichia coli O103:H2 str. 12009] gi|260856685|ref|YP_003230576.1| putative lipoprotein [Escherichia coli O26:H11 str. 11368] gi|260869277|ref|YP_003235679.1| putative lipoprotein [Escherichia coli O111:H- str. 11128] gi|261227480|ref|ZP_05941761.1| Lipoprotein required for outer membrane biogenesis [Escherichia coli O157:H7 str. FRIK2000] gi|261255674|ref|ZP_05948207.1| putative lipoprotein [Escherichia coli O157:H7 str. FRIK966] gi|291283868|ref|YP_003500686.1| putative lipoprotein [Escherichia coli O55:H7 str. CB9615] gi|293406105|ref|ZP_06650031.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli FVEC1412] gi|293415868|ref|ZP_06658508.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli B185] gi|297516263|ref|ZP_06934649.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli OP50] gi|298381837|ref|ZP_06991434.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli FVEC1302] gi|300819931|ref|ZP_07100114.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 107-1] gi|300825128|ref|ZP_07105221.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 119-7] gi|300900219|ref|ZP_07118405.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 198-1] gi|300905085|ref|ZP_07122892.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 84-1] gi|300921139|ref|ZP_07137520.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 115-1] gi|300922521|ref|ZP_07138630.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 182-1] gi|300930680|ref|ZP_07146064.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 187-1] gi|300940368|ref|ZP_07154956.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 21-1] gi|300948989|ref|ZP_07163045.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 116-1] gi|300957378|ref|ZP_07169595.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 175-1] gi|300986848|ref|ZP_07177831.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 45-1] gi|301024187|ref|ZP_07187894.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 196-1] gi|301026355|ref|ZP_07189803.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 69-1] gi|301050464|ref|ZP_07197346.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 185-1] gi|301305759|ref|ZP_07211846.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 124-1] gi|301326711|ref|ZP_07220029.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 78-1] gi|301644037|ref|ZP_07244055.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 146-1] gi|306812485|ref|ZP_07446683.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli NC101] gi|307139316|ref|ZP_07498672.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli H736] gi|307315091|ref|ZP_07594675.1| outer membrane assembly lipoprotein YfiO [Escherichia coli W] gi|309794108|ref|ZP_07688532.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 145-7] gi|312965510|ref|ZP_07779742.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|312973161|ref|ZP_07787334.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|331643312|ref|ZP_08344443.1| putative lipoprotein [Escherichia coli H736] gi|331648339|ref|ZP_08349427.1| putative lipoprotein [Escherichia coli M605] gi|331654055|ref|ZP_08355055.1| putative lipoprotein [Escherichia coli M718] gi|331658745|ref|ZP_08359687.1| putative lipoprotein [Escherichia coli TA206] gi|331669347|ref|ZP_08370193.1| putative lipoprotein [Escherichia coli TA271] gi|331674038|ref|ZP_08374800.1| putative lipoprotein [Escherichia coli TA280] gi|331678589|ref|ZP_08379263.1| putative lipoprotein [Escherichia coli H591] gi|332280709|ref|ZP_08393122.1| lipoprotein [Shigella sp. D9] gi|81170861|sp|P0AC04|YFIO_ECO57 RecName: Full=UPF0169 lipoprotein yfiO; Flags: Precursor gi|81170862|sp|P0AC03|YFIO_ECOL6 RecName: Full=UPF0169 lipoprotein yfiO; Flags: Precursor gi|81170863|sp|P0AC02|YFIO_ECOLI RecName: Full=UPF0169 lipoprotein yfiO; Flags: Precursor gi|12517019|gb|AAG57708.1|AE005490_3 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|26109364|gb|AAN81566.1|AE016764_248 Hypothetical lipoprotein yfiO precursor [Escherichia coli CFT073] gi|1788947|gb|AAC75644.1| lipoprotein required for OM biogenesis, in BamABCD complex [Escherichia coli str. K-12 substr. MG1655] gi|1799999|dbj|BAA16480.1| predicted lipoprotein [Escherichia coli str. K12 substr. W3110] gi|13362929|dbj|BAB36881.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|73856631|gb|AAZ89338.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|91073503|gb|ABE08384.1| hypothetical protein UTI89_C2928 [Escherichia coli UTI89] gi|115513943|gb|ABJ02018.1| putative lipoprotein [Escherichia coli APEC O1] gi|157067751|gb|ABV07006.1| outer membrane assembly lipoprotein YfiO [Escherichia coli HS] gi|157077257|gb|ABV16965.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E24377A] gi|169754054|gb|ACA76753.1| conserved hypothetical protein [Escherichia coli ATCC 8739] gi|169890035|gb|ACB03742.1| predicted lipoprotein [Escherichia coli str. K-12 substr. DH10B] gi|170520623|gb|ACB18801.1| outer membrane assembly lipoprotein YfiO [Escherichia coli SMS-3-5] gi|187429224|gb|ACD08498.1| outer membrane assembly lipoprotein YfiO [Shigella boydii CDC 3083-94] gi|187770689|gb|EDU34533.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4196] gi|188013996|gb|EDU52118.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4113] gi|188487524|gb|EDU62627.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 53638] gi|189354558|gb|EDU72977.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4401] gi|189359602|gb|EDU78021.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4486] gi|189367289|gb|EDU85705.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4501] gi|189370903|gb|EDU89319.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC869] gi|189376189|gb|EDU94605.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC508] gi|190900898|gb|EDV60684.1| outer membrane assembly lipoprotein YfiO [Escherichia coli B7A] gi|192929280|gb|EDV82889.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E22] gi|192954991|gb|EDV85493.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E110019] gi|194411791|gb|EDX28112.1| outer membrane assembly lipoprotein YfiO [Escherichia coli B171] gi|194421745|gb|EDX37754.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 101-1] gi|208727226|gb|EDZ76827.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4206] gi|208734857|gb|EDZ83544.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4045] gi|208738756|gb|EDZ86438.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4042] gi|209157108|gb|ACI34541.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. EC4115] gi|209762668|gb|ACI79646.1| hypothetical protein ECs3458 [Escherichia coli] gi|209762670|gb|ACI79647.1| hypothetical protein ECs3458 [Escherichia coli] gi|209762672|gb|ACI79648.1| hypothetical protein ECs3458 [Escherichia coli] gi|209762674|gb|ACI79649.1| hypothetical protein ECs3458 [Escherichia coli] gi|209762676|gb|ACI79650.1| hypothetical protein ECs3458 [Escherichia coli] gi|209913331|dbj|BAG78405.1| putative lipoprotein [Escherichia coli SE11] gi|215266006|emb|CAS10417.1| predicted lipoprotein [Escherichia coli O127:H6 str. E2348/69] gi|217319388|gb|EEC27813.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7 str. TW14588] gi|218352952|emb|CAU98751.1| putative lipoprotein [Escherichia coli 55989] gi|218361943|emb|CAQ99545.1| putative lipoprotein [Escherichia coli IAI1] gi|218366285|emb|CAR04037.1| putative lipoprotein [Escherichia coli S88] gi|218371093|emb|CAR18922.1| putative lipoprotein [Escherichia coli IAI39] gi|218428278|emb|CAR09056.1| putative lipoprotein [Escherichia coli ED1a] gi|218433194|emb|CAR14093.1| putative lipoprotein [Escherichia coli UMN026] gi|226839296|gb|EEH71317.1| outer membrane assembly lipoprotein YfiO [Escherichia sp. 1_1_43] gi|226899856|gb|EEH86115.1| outer membrane protein assembly complex subunit YfiO [Escherichia sp. 3_2_53FAA] gi|227834802|gb|EEJ45268.1| DNA uptake lipoprotein ComL [Escherichia coli 83972] gi|238862627|gb|ACR64625.1| predicted lipoprotein [Escherichia coli BW2952] gi|242378191|emb|CAQ32966.1| BamD, subunit of Outer Membrane Protein Assembly Complex [Escherichia coli BL21(DE3)] gi|253323553|gb|ACT28155.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974467|gb|ACT40138.1| predicted lipoprotein [Escherichia coli B str. REL606] gi|253978634|gb|ACT44304.1| predicted lipoprotein [Escherichia coli BL21(DE3)] gi|254593943|gb|ACT73304.1| Lipoprotein required for outer membrane biogenesis [Escherichia coli O157:H7 str. TW14359] gi|257755334|dbj|BAI26836.1| predicted lipoprotein [Escherichia coli O26:H11 str. 11368] gi|257760424|dbj|BAI31921.1| predicted lipoprotein [Escherichia coli O103:H2 str. 12009] gi|257765633|dbj|BAI37128.1| predicted lipoprotein [Escherichia coli O111:H- str. 11128] gi|260448329|gb|ACX38751.1| outer membrane assembly lipoprotein YfiO [Escherichia coli DH1] gi|281179643|dbj|BAI55973.1| putative lipoprotein [Escherichia coli SE15] gi|284922543|emb|CBG35630.1| putative lipoprotein [Escherichia coli 042] gi|290763741|gb|ADD57702.1| predicted lipoprotein [Escherichia coli O55:H7 str. CB9615] gi|291426111|gb|EFE99143.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli FVEC1412] gi|291432057|gb|EFF05039.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli B185] gi|294489858|gb|ADE88614.1| outer membrane assembly lipoprotein YfiO [Escherichia coli IHE3034] gi|298276977|gb|EFI18493.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli FVEC1302] gi|299880529|gb|EFI88740.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 196-1] gi|300297835|gb|EFJ54220.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 185-1] gi|300315881|gb|EFJ65665.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 175-1] gi|300356254|gb|EFJ72124.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 198-1] gi|300395570|gb|EFJ79108.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 69-1] gi|300403012|gb|EFJ86550.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 84-1] gi|300407858|gb|EFJ91396.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 45-1] gi|300411912|gb|EFJ95222.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 115-1] gi|300421133|gb|EFK04444.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 182-1] gi|300451546|gb|EFK15166.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 116-1] gi|300454822|gb|EFK18315.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 21-1] gi|300461454|gb|EFK24947.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 187-1] gi|300522400|gb|EFK43469.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 119-7] gi|300527519|gb|EFK48581.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 107-1] gi|300839013|gb|EFK66773.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 124-1] gi|300846634|gb|EFK74394.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 78-1] gi|301077611|gb|EFK92417.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 146-1] gi|305854523|gb|EFM54961.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli NC101] gi|306905520|gb|EFN36054.1| outer membrane assembly lipoprotein YfiO [Escherichia coli W] gi|307554610|gb|ADN47385.1| outer membrane assembly lipoprotein YfiO [Escherichia coli ABU 83972] gi|307625853|gb|ADN70157.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli UM146] gi|308122013|gb|EFO59275.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 145-7] gi|309702977|emb|CBJ02308.1| putative lipoprotein [Escherichia coli ETEC H10407] gi|310333103|gb|EFQ00317.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|312289930|gb|EFR17818.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|312947169|gb|ADR27996.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli O83:H1 str. NRG 857C] gi|315061910|gb|ADT76237.1| predicted lipoprotein [Escherichia coli W] gi|315137215|dbj|BAJ44374.1| putative lipoprotein [Escherichia coli DH1] gi|315253123|gb|EFU33091.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 85-1] gi|315284806|gb|EFU44251.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 110-3] gi|315290936|gb|EFU50301.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 153-1] gi|315298637|gb|EFU57892.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 16-3] gi|315615336|gb|EFU95970.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 3431] gi|320177088|gb|EFW52105.1| outer membrane protein assembly complex subunit YfiO [Shigella dysenteriae CDC 74-1112] gi|320185009|gb|EFW59791.1| outer membrane protein assembly complex subunit YfiO [Shigella flexneri CDC 796-83] gi|320188932|gb|EFW63591.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli O157:H7 str. EC1212] gi|320194760|gb|EFW69389.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli WV_060327] gi|320198370|gb|EFW72972.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli EC4100B] gi|320640779|gb|EFX10277.1| outer membrane biogenesis protein BamD [Escherichia coli O157:H7 str. G5101] gi|320646124|gb|EFX15069.1| outer membrane biogenesis protein BamD [Escherichia coli O157:H- str. 493-89] gi|320651421|gb|EFX19822.1| outer membrane biogenesis protein BamD [Escherichia coli O157:H- str. H 2687] gi|320657026|gb|EFX24849.1| outer membrane biogenesis protein BamD [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662690|gb|EFX30034.1| outer membrane biogenesis protein BamD [Escherichia coli O55:H7 str. USDA 5905] gi|320667507|gb|EFX34431.1| outer membrane biogenesis protein BamD [Escherichia coli O157:H7 str. LSU-61] gi|323156251|gb|EFZ42410.1| outer membrane assembly lipoprotein YfiO [Escherichia coli EPECa14] gi|323167769|gb|EFZ53464.1| outer membrane assembly lipoprotein YfiO [Shigella sonnei 53G] gi|323173089|gb|EFZ58720.1| outer membrane assembly lipoprotein YfiO [Escherichia coli LT-68] gi|323177277|gb|EFZ62865.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 1180] gi|323184528|gb|EFZ69902.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 1357] gi|323188382|gb|EFZ73673.1| outer membrane assembly lipoprotein YfiO [Escherichia coli RN587/1] gi|323377509|gb|ADX49777.1| outer membrane assembly lipoprotein YfiO [Escherichia coli KO11] gi|323935609|gb|EGB31929.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E1520] gi|323941385|gb|EGB37569.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E482] gi|323946276|gb|EGB42309.1| outer membrane assembly lipoprotein YfiO [Escherichia coli H120] gi|323957036|gb|EGB52762.1| outer membrane assembly lipoprotein YfiO [Escherichia coli H263] gi|323960545|gb|EGB56174.1| outer membrane assembly lipoprotein YfiO [Escherichia coli H489] gi|323971460|gb|EGB66696.1| outer membrane assembly lipoprotein YfiO [Escherichia coli TA007] gi|323978452|gb|EGB73536.1| outer membrane assembly lipoprotein YfiO [Escherichia coli TW10509] gi|324005835|gb|EGB75054.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 57-2] gi|324016578|gb|EGB85797.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 117-3] gi|324120054|gb|EGC13930.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E1167] gi|326344349|gb|EGD68107.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli O157:H7 str. 1125] gi|326347718|gb|EGD71435.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli O157:H7 str. 1044] gi|330912360|gb|EGH40870.1| putative component of the lipoprotein assembly complex [Escherichia coli AA86] gi|331036783|gb|EGI09007.1| putative lipoprotein [Escherichia coli H736] gi|331042086|gb|EGI14228.1| putative lipoprotein [Escherichia coli M605] gi|331047437|gb|EGI19514.1| putative lipoprotein [Escherichia coli M718] gi|331053327|gb|EGI25356.1| putative lipoprotein [Escherichia coli TA206] gi|331063015|gb|EGI34928.1| putative lipoprotein [Escherichia coli TA271] gi|331068777|gb|EGI40170.1| putative lipoprotein [Escherichia coli TA280] gi|331073419|gb|EGI44740.1| putative lipoprotein [Escherichia coli H591] gi|332103061|gb|EGJ06407.1| lipoprotein [Shigella sp. D9] gi|332344466|gb|AEE57800.1| conserved hypothetical protein [Escherichia coli UMNK88] gi|332999361|gb|EGK18946.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri VA-6] gi|333001155|gb|EGK20725.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-272] gi|333015793|gb|EGK35130.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-227] Length = 245 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A + Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|319405998|emb|CBI79629.1| competence lipoprotein precursor [Bartonella sp. AR 15-3] Length = 297 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 85/254 (33%), Positives = 131/254 (51%), Gaps = 2/254 (0%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDS-VTDVRYQREVYEKAVLFLKEQNFSKAY 77 + K + I VCFL G + + V + +Y +A+ L S+A Sbjct: 19 VRKVFIGILLG-GVCFLAGCLGKGKNILDPSVHVLKIDPPDVLYNQALANLDVGRLSEAA 77 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + F + + + RKSL+M AF Y KY A S+ + YI+ YP + + Y YY++ Sbjct: 78 KKFAVIEKQYAYTEWGRKSLIMGAFTNYRLAKYDDAISMAQHYISLYPLADDSAYAYYII 137 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 G+S + I DV DQ+ TK + M ++ERY S YV A+ + GR QLA KE++IG Sbjct: 138 GLSSFRRIPDVTRDQQDTKRAIAAMQILIERYPQSEYVSDAKAKIRFGREQLAGKEMQIG 197 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 RYY + +Y+AA RF+ V+ Y D EEA+ RL E AL L EA+ +++ Y Sbjct: 198 RYYEEGRQYLAASKRFRTVIEEYPDTNQIEEALFRLTEVNFALGLTMEAQTAAAILGRNY 257 Query: 258 PQGYWARYVETLVK 271 P+ W ++ L++ Sbjct: 258 PESKWYKFSYDLLQ 271 >gi|330721663|gb|EGG99674.1| putative component of the lipoprotein assembly complex (forms a complex with YaeT2C YfgL2C and NlpB) [gamma proteobacterium IMCC2047] Length = 286 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 106/249 (42%), Gaps = 16/249 (6%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + L G R+ +S + +E A+ K N+S A E Sbjct: 5 SLKILASLVCLALLLTGCSSNDKREFTENS------ETAFFENAMKASKAGNYSTAIELL 58 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + +PF ++++ L F Y + Y+ + + +I +P+ +DYVYYL G++ Sbjct: 59 EELESRYPFGRYSQQAQLELIFAYYKSADYESSRATSSRFIRLHPQHLKLDYVYYLKGLA 118 Query: 141 YAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 Q +D D A + L ++ R+ +S Y AR + RNQLA Sbjct: 119 SYQQDKDFFDRFLNIETSQRDMGAARQSLVDFGILLNRFPDSQYADEARARMIYLRNQLA 178 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 E+ +G+YY+KR ++AA R + V+ NY + +A +++ Y L L D + Sbjct: 179 EHEIHVGQYYIKRKAWIAAANRGRYVVENYPTTPSVPDGLALMIQGYQQLGLTDLVNQTQ 238 Query: 251 SLIQERYPQ 259 ++ + P Sbjct: 239 KILSQNAPN 247 >gi|16761517|ref|NP_457134.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142988|ref|NP_806330.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213051816|ref|ZP_03344694.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213424874|ref|ZP_03357624.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213850145|ref|ZP_03381043.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25306749|pir||AD0832 probable lipoprotein STY2852 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503818|emb|CAD05843.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Typhi] gi|29138620|gb|AAO70190.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 245 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 100/252 (39%), Gaps = 17/252 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + ++ P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + V D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSVLQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY RG +VA + R + +L NY D + +A+ + AY + L +A + Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233 Query: 249 VVSLIQERYPQG 260 V +I Sbjct: 234 VAKIIAANSKNT 245 >gi|146276754|ref|YP_001166913.1| TPR repeat-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145554995|gb|ABP69608.1| Tetratricopeptide TPR_2 repeat protein [Rhodobacter sphaeroides ATCC 17025] Length = 278 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 5/253 (1%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAY 77 + A + ++ V L G S ++ L++ T ++Y++ L+ Q +A Sbjct: 2 VKSGARMLGTALCVALLTGCGGGSQKEPPLENFT----AEQIYQRGEYELEAQTKPDRAI 57 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 YF++ R +P+ A+++L+M A+ + A Y++A + ++ YP ++ Y YL+ Sbjct: 58 RYFSEVERLYPYTEWAKRALIMQAYSYHKAKNYEEARGAAQRFLDFYPGDEDAAYAQYLL 117 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 +SY I +V DQ T LQ + ++E+Y +S Y + A + + LAAKE+EIG Sbjct: 118 ALSYYDQIDEVGRDQGLTFQALQALRVVIEQYPDSEYAQSAILKFDLAFDHLAAKEMEIG 177 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 RYYLKRG Y AAI RF+ V+ + H EA+ RLVE Y+AL L +EA+ +++ Y Sbjct: 178 RYYLKRGHYSAAINRFRTVVEEFQTTTHTAEALHRLVEGYLALGLQNEAQTAGAILGHNY 237 Query: 258 PQGYWARYVETLV 270 + L+ Sbjct: 238 RSSPFYDDSYRLL 250 >gi|292490723|ref|YP_003526162.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus halophilus Nc4] gi|291579318|gb|ADE13775.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus halophilus Nc4] Length = 260 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 18/254 (7%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 Y +L + + C +G + Y +A L N+ + Sbjct: 1 MRIFYFLSLFLVLWLGGCSWLG--------KPQEQPEADWNVERYYSEAKAALNSGNYQQ 52 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + Q +PF A+++LL SA+ Y + + A + + +I YP + ++DY +Y Sbjct: 53 AITLYEQLEARYPFGVYAQQALLESAYAYYKFDEPESALAALDRFIRLYPLNPHMDYAHY 112 Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 L G+ + D + + L+ +V+R+ +S Y K + Sbjct: 113 LKGLVNFHRGIGLIEKYIPRDESQRDPESARDALKDFRTLVKRFPDSRYAKDGAQRIVYL 172 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 RN+LA E+ + +YY++RG Y+ AI R + V+ NY EA+ + Y L L + Sbjct: 173 RNRLAQHEINVAQYYMRRGAYIGAINRAKYVVENYQRTPTVPEALTIMARGYKVLGLDEL 232 Query: 246 AREVVSLIQERYPQ 259 A + + +++ +P Sbjct: 233 AEDTLRVLETNFPG 246 >gi|66043990|ref|YP_233831.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. syringae B728a] gi|63254697|gb|AAY35793.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. syringae B728a] gi|330954254|gb|EGH54514.1| competence lipoprotein ComL, putative [Pseudomonas syringae Cit 7] Length = 340 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 14/229 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 18 CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150 + Y G+ + A S E +I +P+ NVDY YY+ G++ Sbjct: 74 IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|302383769|ref|YP_003819592.1| outer membrane assembly lipoprotein YfiO [Brevundimonas subvibrioides ATCC 15264] gi|302194397|gb|ADL01969.1| outer membrane assembly lipoprotein YfiO [Brevundimonas subvibrioides ATCC 15264] Length = 286 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 5/254 (1%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 L + L + + L + R + R +Y L+ +S A + Sbjct: 11 LRRGGLILMAAAVTLTLPACGGGAGR---PRLAYEERPVELLYNTGYTRLQSNRWSDAVD 67 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 YF + R P++ +R+++LM + Y G Y+++ + + +I+ +P S + Y +Y+ Sbjct: 68 YFQEVERQHPYSEWSRRAILMQVYAHYQNGSYEESIAAADRFISLFPGSPSAAYAFYMRA 127 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 + + I DV DQ + L + + RY S Y A + + +QLA KE+ IGR Sbjct: 128 TCHFEQIVDVGRDQNQAQQALDGLRDVARRYPGSSYATDATVKIDMVNDQLAGKEMSIGR 187 Query: 199 YYLKRGEYVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 YY + +AAI R++ V+ N Y H EA+ RLVE Y++L L DEA S++ Sbjct: 188 YYQRANLPLAAIGRYKAVIDNEAYQRTSHTPEALYRLVEVYLSLGLKDEAERNGSVLGFN 247 Query: 257 YPQGYWARYVETLV 270 YP W L+ Sbjct: 248 YPGSPWYSQAYALL 261 >gi|332088104|gb|EGI93229.1| outer membrane assembly lipoprotein YfiO [Shigella boydii 5216-82] Length = 245 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A + Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQINAQAEK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|213971043|ref|ZP_03399163.1| competence lipoprotein ComL [Pseudomonas syringae pv. tomato T1] gi|301384234|ref|ZP_07232652.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. tomato Max13] gi|302059467|ref|ZP_07251008.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. tomato K40] gi|302134991|ref|ZP_07260981.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924151|gb|EEB57726.1| competence lipoprotein ComL [Pseudomonas syringae pv. tomato T1] gi|331018388|gb|EGH98444.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 340 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 14/229 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 18 CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150 + Y G+ + A S E +I +P+ NVDY YY+ G++ Sbjct: 74 IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D A + +++ RY NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 134 DPGAARDSFNEFAQLTSRYPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|146312716|ref|YP_001177790.1| outer membrane protein assembly complex subunit YfiO [Enterobacter sp. 638] gi|145319592|gb|ABP61739.1| conserved hypothetical protein [Enterobacter sp. 638] Length = 245 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 98/251 (39%), Gaps = 20/251 (7%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 ++ S+A+ G S + D+ E+Y A L++ N+ + Sbjct: 1 MTRMKYLVAAATLSLALVGCSG-----SNEQVPDNPP-----NEIYATAQQKLQDGNWKQ 50 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A +PF +++ L + Y A + + ++ P N+DYV Y Sbjct: 51 AITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQATIDRFMRLNPTHPNIDYVMY 110 Query: 136 LVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G++ + D + + S++V Y NS Y A + Sbjct: 111 MRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRGYPNSQYTTDATKRLVFL 170 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 +++LA E + YY +RG +VA + R + +L +Y D + + + + AY + + + Sbjct: 171 KDRLAKYEYSVAEYYTRRGAWVAVVNRVEGMLRDYPDTQATRDGLKLMENAYRQMQMNAQ 230 Query: 246 AREVVSLIQER 256 A +V +I Sbjct: 231 AEKVAKIIAAN 241 >gi|289674869|ref|ZP_06495759.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. syringae FF5] gi|330941211|gb|EGH44079.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. pisi str. 1704B] Length = 340 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 14/229 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 18 CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150 + Y G+ + A S E +I +P+ NVDY YY+ G++ Sbjct: 74 IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|283835693|ref|ZP_06355434.1| competence lipoprotein ComL [Citrobacter youngae ATCC 29220] gi|291068910|gb|EFE07019.1| competence lipoprotein ComL [Citrobacter youngae ATCC 29220] Length = 245 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 99/248 (39%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRGYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY RG +VA + R + +L +Y D + +A+ + AY + + +A + Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|222034299|emb|CAP77040.1| UPF0169 lipoprotein yfiO [Escherichia coli LF82] Length = 245 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 101/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A ++ + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAVIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A + Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|24113931|ref|NP_708441.1| outer membrane protein assembly complex subunit YfiO [Shigella flexneri 2a str. 301] gi|30063990|ref|NP_838161.1| outer membrane protein assembly complex subunit YfiO [Shigella flexneri 2a str. 2457T] gi|24053035|gb|AAN44148.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30042246|gb|AAP17971.1| hypothetical protein S2828 [Shigella flexneri 2a str. 2457T] gi|281602001|gb|ADA74985.1| putative lipoprotein [Shigella flexneri 2002017] gi|313648269|gb|EFS12713.1| hypothetical protein SF2457T_3266 [Shigella flexneri 2a str. 2457T] gi|332753863|gb|EGJ84240.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri 4343-70] gi|332754014|gb|EGJ84386.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-671] gi|332755663|gb|EGJ86026.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri 2747-71] gi|332765570|gb|EGJ95783.1| bamD [Shigella flexneri 2930-71] gi|332997823|gb|EGK17433.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-218] gi|333015915|gb|EGK35251.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-304] Length = 245 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A + Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRIEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|323963905|gb|EGB59398.1| outer membrane assembly lipoprotein YfiO [Escherichia coli M863] gi|327252301|gb|EGE63973.1| outer membrane assembly lipoprotein YfiO [Escherichia coli STEC_7v] Length = 245 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A + Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEDMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|298485412|ref|ZP_07003501.1| Competence lipoprotein ComL [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160062|gb|EFI01094.1| Competence lipoprotein ComL [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 340 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 14/229 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 18 CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150 + Y G+ + A S E +I +P+ NVDY YY+ G++ Sbjct: 74 IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|28868054|ref|NP_790673.1| competence lipoprotein ComL [Pseudomonas syringae pv. tomato str. DC3000] gi|28851290|gb|AAO54368.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 338 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 14/229 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 16 CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 71 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150 + Y G+ + A S E +I +P+ NVDY YY+ G++ Sbjct: 72 IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 131 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D A + +++ RY NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 132 DPGAARDSFNEFAQLTSRYPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 191 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 192 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 240 >gi|304392248|ref|ZP_07374190.1| lipoprotein [Ahrensia sp. R2A130] gi|303296477|gb|EFL90835.1| lipoprotein [Ahrensia sp. R2A130] Length = 278 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 77/230 (33%), Positives = 129/230 (56%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 + + V + Y +A+ L N S+A + F + R P++ A+K+ +MS Sbjct: 24 CAKDEDINSFVDPTVPADQTYNEALANLDAGNSSEAKKKFAKLDRQHPYSNYAKKAGVMS 83 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 ++ Y + +Y +A + G+ ++ YP + Y YLVGMS+ + I DV DQ + K Q Sbjct: 84 TYLAYRSAEYPEAIARGKRFVQLYPSNAEAPYALYLVGMSHFRQINDVTRDQDSAKAAYQ 143 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 MS +V+RY S YV+ A+ + + ++QLA KE+ +GRYY +R EY+A+I R++ V+ + Sbjct: 144 AMSNLVQRYPESEYVEDAKRKMRISKDQLAGKEMLVGRYYQERREYLASINRYRTVVEQF 203 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 D H EEA+ARL E+Y AL L EA+ +++ +P W + L+ Sbjct: 204 EDTRHVEEALARLTESYYALGLQSEAQTAAAVLGHNFPDSQWYKDSYALL 253 >gi|295097163|emb|CBK86253.1| outer membrane assembly lipoprotein YfiO [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 245 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 99/251 (39%), Gaps = 20/251 (7%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 ++ S+A+ G S + D+ E+Y A L++ N+ + Sbjct: 1 MTRMKYLVAAATLSLALVGCSG-----SNEQVPDNPP-----NEIYATAQQKLQDGNWKQ 50 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A +PF +++ L + Y A + + ++ P N+DYV Y Sbjct: 51 AITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQATIDRFMRLNPTHPNIDYVMY 110 Query: 136 LVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G++ + D + + S++V Y NS Y+ A + Sbjct: 111 MRGLTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRSYPNSQYITDATKRLVFL 170 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 +++LA E + YY +RG +VA + R + +L +Y D + + + + AY + + + Sbjct: 171 KDRLAKYEYSVAEYYTRRGAWVAVVNRVEGMLRDYPDTQATRDGLKLMENAYRQMQMTAQ 230 Query: 246 AREVVSLIQER 256 A +V +I Sbjct: 231 ADKVAKIIAAN 241 >gi|329848741|ref|ZP_08263769.1| hypothetical protein ABI_18130 [Asticcacaulis biprosthecum C19] gi|328843804|gb|EGF93373.1| hypothetical protein ABI_18130 [Asticcacaulis biprosthecum C19] Length = 295 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 77/248 (31%), Positives = 132/248 (53%), Gaps = 3/248 (1%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A+ + +A+ L G + V + R +Y + L ++++++A +YF + Sbjct: 11 AMVLAAGMALTALSGCAGKGDEQHL---VYEERPVELLYATGMERLDDKSWNEAGQYFEE 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 R P++ +R++++M+ + Y AGKY +A++ +++I YP S+ Y YY+ + Sbjct: 68 VQRQHPYSEWSRRAIVMTIYTHYQAGKYAEASAASDQFIHLYPGSELTPYAYYMKAICSF 127 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + I DV DQ +T +S +V RY +S Y K AR + + ++QLA KE+EIGRYYL Sbjct: 128 EQIVDVGRDQASTTAAQALLSDVVRRYPSSEYAKDARVKIDMVQDQLAGKEMEIGRYYLN 187 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + +AAI RF+ V + Y H EA+ RLVEA + L +EA +++ YP W Sbjct: 188 DNQPLAAIGRFKTVASTYQTTSHTPEALYRLVEANEVMGLHEEAMRNGAVLGYNYPGDRW 247 Query: 263 ARYVETLV 270 L+ Sbjct: 248 YAAAYKLL 255 >gi|110642758|ref|YP_670488.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli 536] gi|191174570|ref|ZP_03036065.1| outer membrane assembly lipoprotein YfiO [Escherichia coli F11] gi|300976567|ref|ZP_07173519.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 200-1] gi|110344350|gb|ABG70587.1| hypothetical lipoprotein YfiO precursor [Escherichia coli 536] gi|190905143|gb|EDV64787.1| outer membrane assembly lipoprotein YfiO [Escherichia coli F11] gi|300308509|gb|EFJ63029.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 200-1] gi|324012461|gb|EGB81680.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 60-1] Length = 245 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQRFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A + Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|22124819|ref|NP_668242.1| outer membrane protein assembly complex subunit YfiO [Yersinia pestis KIM 10] gi|45440504|ref|NP_992043.1| outer membrane protein assembly complex subunit YfiO [Yersinia pestis biovar Microtus str. 91001] gi|51595195|ref|YP_069386.1| outer membrane protein assembly complex subunit YfiO [Yersinia pseudotuberculosis IP 32953] gi|108808760|ref|YP_652676.1| outer membrane protein assembly complex subunit YfiO [Yersinia pestis Antiqua] gi|108810983|ref|YP_646750.1| outer membrane protein assembly complex subunit YfiO [Yersinia pestis Nepal516] gi|145600173|ref|YP_001164249.1| outer membrane protein assembly complex subunit YfiO [Yersinia pestis Pestoides F] gi|153948219|ref|YP_001402172.1| outer membrane protein assembly complex subunit YfiO [Yersinia pseudotuberculosis IP 31758] gi|153997672|ref|ZP_02022772.1| putative lipoprotein [Yersinia pestis CA88-4125] gi|162419347|ref|YP_001607808.1| outer membrane protein assembly complex subunit YfiO [Yersinia pestis Angola] gi|165926624|ref|ZP_02222456.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. F1991016] gi|165936801|ref|ZP_02225368.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. IP275] gi|166010083|ref|ZP_02230981.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. E1979001] gi|166213080|ref|ZP_02239115.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. B42003004] gi|167399369|ref|ZP_02304893.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421522|ref|ZP_02313275.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423440|ref|ZP_02315193.1| putative lipoprotein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470272|ref|ZP_02334976.1| putative lipoprotein [Yersinia pestis FV-1] gi|170025567|ref|YP_001722072.1| outer membrane protein assembly complex subunit YfiO [Yersinia pseudotuberculosis YPIII] gi|186894213|ref|YP_001871325.1| outer membrane protein assembly complex subunit YfiO [Yersinia pseudotuberculosis PB1/+] gi|218930303|ref|YP_002348178.1| outer membrane protein assembly complex subunit YfiO [Yersinia pestis CO92] gi|229838894|ref|ZP_04459053.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896562|ref|ZP_04511729.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis Pestoides A] gi|229899461|ref|ZP_04514604.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis biovar Orientalis str. India 195] gi|229901199|ref|ZP_04516322.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis Nepal516] gi|270489384|ref|ZP_06206458.1| outer membrane assembly lipoprotein YfiO [Yersinia pestis KIM D27] gi|294504992|ref|YP_003569054.1| putative lipoprotein [Yersinia pestis Z176003] gi|21957645|gb|AAM84493.1|AE013693_9 hypothetical protein y0911 [Yersinia pestis KIM 10] gi|45435361|gb|AAS60920.1| putative lipoprotein [Yersinia pestis biovar Microtus str. 91001] gi|51588477|emb|CAH20085.1| putative lipoprotein [Yersinia pseudotuberculosis IP 32953] gi|108774631|gb|ABG17150.1| lipoprotein [Yersinia pestis Nepal516] gi|108780673|gb|ABG14731.1| putative lipoprotein [Yersinia pestis Antiqua] gi|115348914|emb|CAL21871.1| putative lipoprotein [Yersinia pestis CO92] gi|145211869|gb|ABP41276.1| lipoprotein [Yersinia pestis Pestoides F] gi|149289309|gb|EDM39389.1| putative lipoprotein [Yersinia pestis CA88-4125] gi|152959714|gb|ABS47175.1| putative lipoprotein [Yersinia pseudotuberculosis IP 31758] gi|162352162|gb|ABX86110.1| putative lipoprotein [Yersinia pestis Angola] gi|165915450|gb|EDR34060.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. IP275] gi|165921552|gb|EDR38749.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. F1991016] gi|165990990|gb|EDR43291.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205867|gb|EDR50347.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960441|gb|EDR56462.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051873|gb|EDR63281.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057610|gb|EDR67356.1| putative lipoprotein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752101|gb|ACA69619.1| putative lipoprotein [Yersinia pseudotuberculosis YPIII] gi|186697239|gb|ACC87868.1| putative lipoprotein [Yersinia pseudotuberculosis PB1/+] gi|229681924|gb|EEO78017.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis Nepal516] gi|229687863|gb|EEO79936.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis biovar Orientalis str. India 195] gi|229695260|gb|EEO85307.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700340|gb|EEO88372.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis Pestoides A] gi|262363057|gb|ACY59778.1| putative lipoprotein [Yersinia pestis D106004] gi|262366981|gb|ACY63538.1| putative lipoprotein [Yersinia pestis D182038] gi|270337888|gb|EFA48665.1| outer membrane assembly lipoprotein YfiO [Yersinia pestis KIM D27] gi|294355451|gb|ADE65792.1| putative lipoprotein [Yersinia pestis Z176003] gi|320016470|gb|ADW00042.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 243 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 106/248 (42%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + L G S++DV D+ E+Y A L++ NF A Sbjct: 1 MTRMKYLVAAATLSLVLTGCS--SNKDVVPDNPP-----SELYATAQQKLQDGNFKGAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y + A + + ++ P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPMAQASIDRFMRLNPTHPNIDYVLYMRG 113 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + I D + + + +++++ Y NS Y A+ + +++ Sbjct: 114 LTDMALDDSALQGFFGIDRSDRDPQHARAAFRDFNQLIQNYPNSQYATDAQKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + +YY KRG YVA + R ++ +Y D + +A+ + AY L L +A + Sbjct: 174 LAKYELAVAQYYTKRGAYVAVVNRVDQMMRDYPDTQATRDALPLMENAYKQLQLNAQADK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|294669552|ref|ZP_06734619.1| hypothetical protein NEIELOOT_01451 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308465|gb|EFE49708.1| hypothetical protein NEIELOOT_01451 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 268 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 59/254 (23%), Positives = 114/254 (44%), Gaps = 13/254 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K L + IA+ + S +D +T ++Y +A L N+++A + Sbjct: 1 MKKILLVVALGIALGGCAANKGTSDKDA---QITQDWPVEKLYAEAQDELNSSNYTRAVK 57 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + FP A+++ L +A+ Y + ++A + E + +P+ N+DY YL G Sbjct: 58 LYELLESRFPQGRYAQQAQLDTAYAYYKDEEREKALAAVERFQRLHPQHPNMDYALYLKG 117 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + D +A + Q + +V+RY S YV+ A + + Sbjct: 118 LILFNEDKSFLNKLASQDWSDRDPKANREAYQAFAELVQRYPQSKYVEEASKQMEKLVDA 177 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + RYY KRG ++AA R Q ++ + + EEA+A + +Y + A + Sbjct: 178 LAGNEISVARYYAKRGAHLAAANRAQNIITGFQNTRFTEEALAIMEVSYRKMNRQQLADD 237 Query: 249 VVSLIQERYPQGYW 262 ++Q+ +PQ + Sbjct: 238 TRRILQQNFPQSPY 251 >gi|71736201|ref|YP_273031.1| competence lipoprotein ComL [Pseudomonas syringae pv. phaseolicola 1448A] gi|289626966|ref|ZP_06459920.1| competence lipoprotein ComL [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651378|ref|ZP_06482721.1| competence lipoprotein ComL [Pseudomonas syringae pv. aesculi str. 2250] gi|71556754|gb|AAZ35965.1| competence lipoprotein ComL [Pseudomonas syringae pv. phaseolicola 1448A] gi|330869190|gb|EGH03899.1| competence lipoprotein ComL [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330891574|gb|EGH24235.1| competence lipoprotein ComL [Pseudomonas syringae pv. mori str. 301020] gi|330988805|gb|EGH86908.1| competence lipoprotein ComL [Pseudomonas syringae pv. lachrymans str. M301315] Length = 340 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 14/229 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 18 CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150 + Y G+ + A S E +I +P+ NVDY YY+ G++ Sbjct: 74 IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|329297085|ref|ZP_08254421.1| outer membrane biogenesis protein BamD [Plautia stali symbiont] Length = 246 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 18/251 (7%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 ++ S+++ LVG S D V D E+Y A L++ NF Sbjct: 1 MTRMKHLVAAATLSLSLA-LVGCSGSS------DPVPD-SPPSEIYATAQQKLQDGNFKA 52 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + +PF +++ L + Y A + ++ P N+DYV Y Sbjct: 53 AIKQLEALDNRYPFGPYSQQVQLDLIYAYYKNTDLPLAQAAISRFMRLNPTHPNIDYVIY 112 Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G++ + I D + + S+++ Y N Y A+ +T Sbjct: 113 MKGLTDMALDDSALQDFFGIDRSDRDPTHARDAFRDFSQLLRGYPNCQYAADAQKRLTFL 172 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 ++ LA E+ + ++Y KRG YVA + R + ++ +Y D + +A+ + AY L L E Sbjct: 173 KDSLAKYELSVAQFYTKRGAYVAVVNRVEGMMRDYPDTQATRDALPLMENAYRQLQLTTE 232 Query: 246 AREVVSLIQER 256 A +V +I Sbjct: 233 ADKVAKIIAAN 243 >gi|330966363|gb|EGH66623.1| competence lipoprotein ComL [Pseudomonas syringae pv. actinidiae str. M302091] Length = 340 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 14/229 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 18 CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150 + Y G+ + A S E +I +P+ NVDY YY+ G++ Sbjct: 74 IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D A + +++ RY NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 134 DPGAARDSFNEFAQLTSRYPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|330878988|gb|EGH13137.1| competence lipoprotein ComL [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 340 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 14/229 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 18 CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150 + Y G+ + A S E +I +P+ NVDY YY+ G++ Sbjct: 74 IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D A + +++ RY NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 134 DPGAARDSFNEFAQLTSRYPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|300691370|ref|YP_003752365.1| lipoprotein, ComL family, tetratricopeptide repeats (TPR) domain [Ralstonia solanacearum PSI07] gi|299078430|emb|CBJ51082.1| putative lipoprotein, ComL family, tetratricopeptide repeats (TPR) domain [Ralstonia solanacearum PSI07] Length = 277 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 14/251 (5%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + + +A + + T ++Y +A L ++SKA +Y+ Sbjct: 14 RIGAVMAAGVACLAISACGIMPEQQDE----TAGWSANKLYSEAKDALDGGDYSKAVKYY 69 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + +PF A+++ + +A+ Y G+ A + + +I +P +VDY YYL G+ Sbjct: 70 EKLESRYPFGPFAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLKGLI 129 Query: 141 YAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 D +A + ++ R+ NS Y A + N +A Sbjct: 130 NFNDNLGWLGRFSNQDLSERDPKAARAAYDAFKTLITRFPNSKYTPDAAQRMQYIVNAMA 189 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 EV+ RYY +RG Y+AA R Q + +Y A EEA+ ++++Y AL + D + Sbjct: 190 DHEVQAARYYYRRGAYLAATNRAQEAIKDYDRAPAVEEALYIMMKSYEALGMKDLHDDTE 249 Query: 251 SLIQERYPQGY 261 +I++ YP Sbjct: 250 RIIKQNYPNSD 260 >gi|110806534|ref|YP_690054.1| outer membrane protein assembly complex subunit YfiO [Shigella flexneri 5 str. 8401] gi|110616082|gb|ABF04749.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] Length = 245 Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 99/248 (39%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + + + Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKGR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A + Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|188582377|ref|YP_001925822.1| lipoprotein [Methylobacterium populi BJ001] gi|179345875|gb|ACB81287.1| putative lipoprotein [Methylobacterium populi BJ001] Length = 291 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 127/227 (55%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + Y ++Y + + ++++++ A + F Q + + ++ +RK LLM+A+ Sbjct: 36 EKYKPEAVPDTPADKLYSEGLAKMEDKDYENAAKQFEQLDKQYTYSDWSRKGLLMTAYAN 95 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y KY A + + Y+ ++P SK+ Y YL+ MS + I DV DQ ++ L + Sbjct: 96 YEGAKYDDAINASKRYLQRHPASKDAAYAQYLMAMSQYKQIPDVTRDQERSERALVALQE 155 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V++Y S Y A+ + + R+QLA KE+ +GR+YL++ + AAI RF+ V++ Y Sbjct: 156 LVQKYPTSEYAADAKAKIQITRDQLAGKEMAVGRFYLEKRAFPAAINRFRDVVSKYQTTR 215 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 HAEEA+ RLVEAY+AL L EA+ +++ +P W + L++ Sbjct: 216 HAEEALERLVEAYMALGLTAEAQTAAAVLGHNFPDSPWYQDAYKLLQ 262 >gi|119387190|ref|YP_918245.1| putative ComL lipoprotein [Paracoccus denitrificans PD1222] gi|119377785|gb|ABL72549.1| putative ComL lipoprotein [Paracoccus denitrificans PD1222] Length = 280 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 71/248 (28%), Positives = 128/248 (51%), Gaps = 4/248 (1%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL-KEQNFSKAYEYFNQC 83 + +++ L G + + + E+Y++ L + A +YF + Sbjct: 9 LVAAVLSLGLLAGCSGGAGKK---PESFENFTAEEIYKRGEYELENSRRPKDAVQYFTEV 65 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 R +P++ A+++L+M A+ + A Y++A + +I YP ++ Y YL+ +SY Sbjct: 66 ERLYPYSEWAKRALIMQAYSYHRARDYEEARGAAQRFIDTYPGDEDAAYAKYLLALSYYD 125 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 I ++ DQ T LQ + ++E+Y ++ Y + A + + LAAKE+EIGRYYLKR Sbjct: 126 QIDEIGRDQGLTFQALQSLREVIEQYPDTEYARSAILKFDLAFDHLAAKEMEIGRYYLKR 185 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 G Y AAI RF++V+ + H EA+ RL EAY+AL L DEA+ +++ + + Sbjct: 186 GHYTAAINRFRVVVEEFQTTSHTPEALMRLTEAYLALGLNDEAQTAGAILGHNFQSSPFY 245 Query: 264 RYVETLVK 271 + ++ Sbjct: 246 QDAFAQLR 253 >gi|149184730|ref|ZP_01863048.1| DNA uptake lipoprotein [Erythrobacter sp. SD-21] gi|148832050|gb|EDL50483.1| DNA uptake lipoprotein [Erythrobacter sp. SD-21] Length = 266 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 75/230 (32%), Positives = 119/230 (51%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 + D+ R +Y +A L A F++ R P++ AR++ LMS Sbjct: 27 GGGSNRPEDTAYVARDVETLYSQAKQELDRGRPQLAAALFDEVERQHPYSPWARRAQLMS 86 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 AF Y AG Y + S + +++ +P +K+ Y YYL+ +SY + I DV DQ+ T+ L Sbjct: 87 AFSYYVAGDYNKTTSSAQRFLSIHPGNKDAPYAYYLIALSYYEQISDVQRDQKVTEQALT 146 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 + + R+ S Y AR + + + LA KE+EIGRYY + G+++AA RFQ V+ Y Sbjct: 147 ALREVNRRFPQSQYAADARLKIDLVEDHLAGKEMEIGRYYQRSGKWIAAQIRFQNVVETY 206 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 HA EA+ RLVE+ +AL + EA + +++ YP W L+ Sbjct: 207 QTTSHAPEALYRLVESSLALGIKPEAVKYAAVLGANYPGNEWYEKAYELI 256 >gi|319404502|emb|CBI78107.1| competence lipoprotein precursor [Bartonella rochalimae ATCC BAA-1498] Length = 297 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 83/254 (32%), Positives = 129/254 (50%), Gaps = 2/254 (0%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDS-VTDVRYQREVYEKAVLFLKEQNFSKAY 77 + K + + CFL G + + V + +Y +A+ L S+A Sbjct: 19 VRKVLIGVLLG-GTCFLAGCLGKGKNILDPSMHVLKIDPPDVLYNQALANLDVGRLSEAA 77 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + F + + + RKSL+M AF Y KY A S+ + YI+ YP + + Y YY++ Sbjct: 78 KKFAIIEKQYAYTDWGRKSLIMGAFTNYRLAKYDDAISMAQHYISLYPLADDSAYAYYII 137 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 G+S + I DV DQ+ TK + M ++ERY S YV A+ + GR QLA KE++IG Sbjct: 138 GLSSFRRIPDVTRDQQDTKRAIAAMQVLIERYPESEYVSDAKAKIRFGREQLAGKEMQIG 197 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 RYY + Y+AA RF+ V+ Y D EEA+ RL E AL L EA+ +++ Y Sbjct: 198 RYYEEGQRYLAASRRFRTVIEEYPDTNQIEEALFRLTEVNFALGLTMEAQTAAAILGRNY 257 Query: 258 PQGYWARYVETLVK 271 P+ W ++ L++ Sbjct: 258 PESKWYKFSYDLLQ 271 >gi|294142198|ref|YP_003558176.1| hypothetical protein SVI_3427 [Shewanella violacea DSS12] gi|293328667|dbj|BAJ03398.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 253 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 94/253 (37%), Gaps = 14/253 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 ++KFA ++ + ++ +Y +A ++ N+SKA Sbjct: 1 MHKFAKGAVLALFSIAITACSSSPDEELKASK----TSPDVLYSQARTSMELGNYSKAVR 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF + L + Y + + +I P K++DYVYY+ G Sbjct: 57 SLEALDSRYPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRFIRLNPTHKDIDYVYYMRG 116 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + Q I D + + R+++ Y NS Y A + +N+ Sbjct: 117 LVNMQSDSYMFHDMLNIDRTDRDPQVAINAFKDFDRLIKSYPNSKYANDAAERMQYLKNR 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA + + YY+K + AA R Q V+ Y E A+ + +AY L Sbjct: 177 LAKYSINVAEYYMKMNAWSAAAIRAQSVMETYPGTSSTERALEIMADAYGELGQEKLKNN 236 Query: 249 VVSLIQERYPQGY 261 V+++++ YP Sbjct: 237 VLTVMKANYPDNK 249 >gi|322614487|gb|EFY11418.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621448|gb|EFY18301.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624309|gb|EFY21142.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629392|gb|EFY26170.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633632|gb|EFY30374.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638325|gb|EFY35023.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639763|gb|EFY36446.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647375|gb|EFY43871.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650455|gb|EFY46865.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322661446|gb|EFY57671.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662646|gb|EFY58854.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667019|gb|EFY63194.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671388|gb|EFY67511.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677605|gb|EFY73668.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681569|gb|EFY77599.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322683969|gb|EFY79979.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195538|gb|EFZ80716.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197911|gb|EFZ83034.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203089|gb|EFZ88121.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205330|gb|EFZ90305.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210520|gb|EFZ95404.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218199|gb|EGA02911.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221535|gb|EGA05948.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223755|gb|EGA08060.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230962|gb|EGA15080.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234686|gb|EGA18772.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238725|gb|EGA22775.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241424|gb|EGA25455.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246878|gb|EGA30845.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253277|gb|EGA37107.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257073|gb|EGA40782.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260454|gb|EGA44065.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264489|gb|EGA47995.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269624|gb|EGA53077.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 245 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 99/252 (39%), Gaps = 17/252 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + ++ P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY RG +VA + R + +L NY D + +A+ + AY + L +A + Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233 Query: 249 VVSLIQERYPQG 260 V +I Sbjct: 234 VAKIIASNSKNT 245 >gi|163852368|ref|YP_001640411.1| putative lipoprotein [Methylobacterium extorquens PA1] gi|163663973|gb|ABY31340.1| putative lipoprotein [Methylobacterium extorquens PA1] Length = 291 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 129/227 (56%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + Y ++Y + + ++++++ A + F+Q + + ++ +RK LLM+A+ Sbjct: 36 EKYKPEAIPDTPADKLYSEGLAKMEDRDYENAAKQFDQLDKQYTYSDWSRKGLLMTAYAN 95 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y KY A + + Y+ ++P SK+ Y YL+ MS + I DV DQ ++ L + Sbjct: 96 YEGAKYDDAINASKRYLQRHPASKDAAYAQYLMAMSQYKQIPDVTRDQERSERALIALQE 155 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V++Y S Y A+ + + R+QLA KE+E+GR+YL++ + AAI RF+ V++ Y Sbjct: 156 LVQKYPTSEYAADAKAKIQITRDQLAGKEMEVGRFYLEKRAFPAAINRFRDVVSKYQTTR 215 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 HAEEA+ RLVEAY+AL L EA+ +++ +P W + L++ Sbjct: 216 HAEEALERLVEAYMALGLTGEAQTAAAVLGHNFPDSPWYQDAYKLLQ 262 >gi|237729510|ref|ZP_04559991.1| outer membrane protein assembly complex subunit YfiO [Citrobacter sp. 30_2] gi|226908116|gb|EEH94034.1| outer membrane protein assembly complex subunit YfiO [Citrobacter sp. 30_2] Length = 245 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 98/248 (39%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRGYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY RG +VA + R + +L +Y D + A+ + AY + + +A + Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRDYPDTQATRNALPLMENAYRQMQMNAQAEK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|322656052|gb|EFY52352.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] Length = 245 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 99/248 (39%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + ++ P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY RG +VA + R + +L NY D + +A+ + AY + L +A + Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIASN 241 >gi|16765979|ref|NP_461594.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56414630|ref|YP_151705.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161502238|ref|YP_001569350.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|161615593|ref|YP_001589558.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167553893|ref|ZP_02347636.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992441|ref|ZP_02573539.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168234183|ref|ZP_02659241.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168244684|ref|ZP_02669616.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168262166|ref|ZP_02684139.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464165|ref|ZP_02698082.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168822473|ref|ZP_02834473.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444235|ref|YP_002041927.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448106|ref|YP_002046669.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472505|ref|ZP_03078489.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197248037|ref|YP_002147566.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197263157|ref|ZP_03163231.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197363557|ref|YP_002143194.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198241761|ref|YP_002216674.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200388577|ref|ZP_03215189.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929736|ref|ZP_03220810.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205353702|ref|YP_002227503.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858013|ref|YP_002244664.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224584516|ref|YP_002638314.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|16421210|gb|AAL21553.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56128887|gb|AAV78393.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|160863585|gb|ABX20208.1| hypothetical protein SARI_00263 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] gi|161364957|gb|ABX68725.1| hypothetical protein SPAB_03374 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402898|gb|ACF63120.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406410|gb|ACF66629.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194458869|gb|EDX47708.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195633350|gb|EDX51764.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095034|emb|CAR60580.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197211740|gb|ACH49137.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241412|gb|EDY24032.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197936277|gb|ACH73610.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199605675|gb|EDZ04220.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204321455|gb|EDZ06655.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205273483|emb|CAR38460.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205321763|gb|EDZ09602.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329289|gb|EDZ16053.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205331816|gb|EDZ18580.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336453|gb|EDZ23217.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205341181|gb|EDZ27945.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349291|gb|EDZ35922.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709816|emb|CAR34168.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224469043|gb|ACN46873.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247857|emb|CBG25686.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994804|gb|ACY89689.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159210|emb|CBW18725.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913653|dbj|BAJ37627.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087096|emb|CBY96864.1| UPF0169 lipoprotein CC_1984 Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223455|gb|EFX48520.1| putative component of the lipoprotein assembly complex forms a complex with YaeT, YfgL, and NlpB [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130997|gb|ADX18427.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326624430|gb|EGE30775.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628808|gb|EGE35151.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332989588|gb|AEF08571.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 245 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 99/252 (39%), Gaps = 17/252 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + ++ P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY RG +VA + R + +L NY D + +A+ + AY + L +A + Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233 Query: 249 VVSLIQERYPQG 260 V +I Sbjct: 234 VAKIIAANSKNT 245 >gi|289824163|ref|ZP_06543758.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 269 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 100/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + ++ P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + V D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSVLQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY RG +VA + R + +L NY D + +A+ + AY + L +A + Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|89093552|ref|ZP_01166500.1| competence lipoprotein ComL, putative [Oceanospirillum sp. MED92] gi|89082242|gb|EAR61466.1| competence lipoprotein ComL, putative [Oceanospirillum sp. MED92] Length = 307 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 112/252 (44%), Gaps = 15/252 (5%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + ++ ++ Y D ++++Y++A+ ++E N+ A E Sbjct: 2 RITKSLIVALFCLMTAACSWFEDLQEYPDVP-----EQQLYQEAMKAMEEVNYDLAIEKL 56 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 +PF + ++ L + + + + A + + +I +P N+DY YYL G++ Sbjct: 57 QLLEARYPFGRFSEQTQLELIYAYFKNYEPEAARAAADRFIRLHPNHDNIDYAYYLKGLT 116 Query: 141 YAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 + I + D A + S +V RY S Y + + +N+LA Sbjct: 117 AFEQDISWITQYLPIDETQRDPGAALDSFESFSTLVNRYPESQYAPDSYKRMVYLKNRLA 176 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 A EV + RYY++R +VAA R + V+ N + +A+A ++EAY L D A + Sbjct: 177 AYEVHVARYYIQREAFVAAANRGRYVIENMQETPAVPDALAVMIEAYTHLGQQDLAADTQ 236 Query: 251 SLIQERYPQGYW 262 S++ + YP+ + Sbjct: 237 SVLSQNYPEYQY 248 >gi|149914537|ref|ZP_01903067.1| competence lipoprotein ComL, putative [Roseobacter sp. AzwK-3b] gi|149811330|gb|EDM71165.1| competence lipoprotein ComL, putative [Roseobacter sp. AzwK-3b] Length = 282 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 75/248 (30%), Positives = 130/248 (52%), Gaps = 1/248 (0%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A + + L G ++SR + + +++E+A L + A E F + Sbjct: 8 ATLVGAIVVGLGLAGCS-ENSRVERGEVDFENYTAEQIFERAEYDLSRNDPDLAAEVFGE 66 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 R +P++ A+++L+M AF + A Y+ + + + +I YP ++ Y YL+ +SY Sbjct: 67 VERLYPYSEWAKRALIMQAFSYHQAEDYENSRASAQRFIDFYPTDEDAAYAQYLLALSYY 126 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 I +V DQ T LQ + ++ER+ +S Y + + + + LAAKE+EIGRYYL+ Sbjct: 127 DQIDEVGRDQGLTFQALQSLREVIERHPDSEYAQSSVLKFDLAFDHLAAKEMEIGRYYLR 186 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + AAI RF++V+ ++ H EA+ RLVEAY++L L DEAR +++ + W Sbjct: 187 GDHFSAAINRFRVVVEDFQTTSHTAEALHRLVEAYLSLGLTDEARTAGAILGYNFRGTQW 246 Query: 263 ARYVETLV 270 TL+ Sbjct: 247 YEDSYTLL 254 >gi|89901093|ref|YP_523564.1| hypothetical protein Rfer_2315 [Rhodoferax ferrireducens T118] gi|89345830|gb|ABD70033.1| putative transmembrane protein [Rhodoferax ferrireducens T118] Length = 268 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 67/252 (26%), Positives = 113/252 (44%), Gaps = 14/252 (5%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K ++ +S+A L+ S+ T ++Y +A L + KA F Sbjct: 5 KLSVVCAWSLAGAVLLLPGCSST----PPDQTADWSPNKIYAEAKDELSSGGYDKAVVLF 60 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + +A+++ L A+ QY +G+ QA + + ++ +P S +DY YL G+ Sbjct: 61 EKLEGRAAGTPLAQQAQLDKAYAQYKSGESAQALATLDRFMKLHPASPALDYALYLKGII 120 Query: 141 YAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 + DQ+A+K + +V R+ S Y AR +T N LA Sbjct: 121 NFNDDLGLFSAVTRQDLAERDQKASKESFESFKELVTRFPESRYTPDARQRMTYIVNSLA 180 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 EV + RYY RG YVAAI R Q+ + +Y EEA+ +V++Y AL L + Sbjct: 181 QYEVHVARYYYGRGAYVAAINRAQVAVTDYQGVPAVEEALFIIVKSYDALGLTQLRDDAK 240 Query: 251 SLIQERYPQGYW 262 ++++ YPQ + Sbjct: 241 RVLEKNYPQTEY 252 >gi|213646597|ref|ZP_03376650.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 270 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 100/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + ++ P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + V D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSVLQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY RG +VA + R + +L NY D + +A+ + AY + L +A + Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|117923624|ref|YP_864241.1| DNA uptake lipoprotein-like protein [Magnetococcus sp. MC-1] gi|117607380|gb|ABK42835.1| DNA uptake lipoprotein-like protein [Magnetococcus sp. MC-1] Length = 302 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 63/254 (24%), Positives = 120/254 (47%), Gaps = 10/254 (3%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + + L G +DV D +V +Y AV ++++N+ A Sbjct: 9 MKRLCMMVMLVL---LLSGCSSTEEKDVQPDLAPEV-----MYRMAVNHVQKKNYKSAAT 60 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F + PF+ A ++ L F Y ++ +A + +I +P V Y +Y++G Sbjct: 61 IFTDLDQKHPFSPWAVRAQLNLIFATYKQDEFDEAVGHAKRFIRLHPRHPEVSYAFYMIG 120 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +++ + I+D DQ TK ++ R+ S Y A+ + RN++A +E+ +GR Sbjct: 121 LAHYRQIKDPYRDQARTKEAATAFHEVINRFGESDYAWEAQKMLDFCRNRMAQQEIVVGR 180 Query: 199 YYLKRGEYVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 YY RGEY+AA+ RF ++ N + D+ EEA+ +V + + L L EA+ ++ Sbjct: 181 YYFDRGEYIAAMKRFNEIVDNPEFRDSLQTEEALFSMVLSALKLGLEQEAKNYAVVLGHN 240 Query: 257 YPQGYWARYVETLV 270 Y G + ++ Sbjct: 241 YKDGRLYAVAKDIL 254 >gi|83942732|ref|ZP_00955193.1| competence lipoprotein ComL, putative [Sulfitobacter sp. EE-36] gi|83953972|ref|ZP_00962693.1| competence lipoprotein ComL, putative [Sulfitobacter sp. NAS-14.1] gi|83841917|gb|EAP81086.1| competence lipoprotein ComL, putative [Sulfitobacter sp. NAS-14.1] gi|83846825|gb|EAP84701.1| competence lipoprotein ComL, putative [Sulfitobacter sp. EE-36] Length = 290 Score = 264 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 72/250 (28%), Positives = 129/250 (51%), Gaps = 2/250 (0%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDS--VTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 A+ + + C +++ + + ++YE+ L + ++A EYF Sbjct: 13 AVLLAGVLGACGGAQDTGRTTNSFFNPQEIPLETYSAEQIYERGEFELNRKRPAEAAEYF 72 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 ++ R +P++ A+++L+M AF + Y + S + YI +P+ + Y YL+ +S Sbjct: 73 SEIERLYPYSEWAKRALIMQAFAYHQDQDYPNSRSAAQRYIDFFPDDDDASYASYLLALS 132 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 Y I +V DQ T LQ + R++E Y +S Y + + + + LA KE+E+GRYY Sbjct: 133 YYDQIDEVGRDQGLTFQALQALRRVIEDYPDSEYARSSVLKFDLAFDHLAGKEMEVGRYY 192 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L+R Y A+I RF++V+ ++ H EA+ RLVEAY++L L DEA+ +++ Y Sbjct: 193 LRRKHYTASINRFRVVVEDFQTTTHTAEALHRLVEAYLSLGLTDEAQTAGAILGHNYQST 252 Query: 261 YWARYVETLV 270 W L+ Sbjct: 253 EWYEASYKLL 262 >gi|238921073|ref|YP_002934588.1| outer membrane protein assembly complex subunit YfiO [Edwardsiella ictaluri 93-146] gi|238870642|gb|ACR70353.1| competence lipoprotein ComL [Edwardsiella ictaluri 93-146] Length = 245 Score = 264 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 22/244 (9%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A T+ ++A C SS++ D+ E+Y A L++ NF A Sbjct: 10 ATTLSLALAGC-------SSSKEAVPDNPP-----AEIYATAQQKLQDGNFKAAITQLEA 57 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +PF +++ L + Y + A + + +I P S+N+ YV Y+ G++ Sbjct: 58 LDNRYPFGPYSQQVQLDLIYAYYKSADLPMAQATIDRFIRLNPTSQNMSYVLYMRGLTDM 117 Query: 143 QM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 M I D + + S++V+RY NS Y A + +N+LA Sbjct: 118 AMDDSALQGFFGIDRSDRDPEYARQAFRDFSQLVQRYPNSAYTTDATKRLVFLKNRLAKH 177 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E+ + R+Y KRG YVA + R + +L NY D + A+ + AY + L EA +V + Sbjct: 178 ELAVARFYTKRGAYVAVVNRVEQMLRNYPDTQATRGALPLMENAYRQMGLNGEADKVQKI 237 Query: 253 IQER 256 I Sbjct: 238 IAFN 241 >gi|330811804|ref|YP_004356266.1| DNA uptake lipoprotein (ComL) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379912|gb|AEA71262.1| Putative DNA uptake lipoprotein (ComL) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 338 Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 14/229 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 SS++V +++++V E+Y++A L +++ A +PF A ++ L Sbjct: 18 CSSKEVVDENLSEV----ELYQQAQNDLDNNSYTSATAKLKALESRYPFGRYADQAQLEL 73 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PY 150 + Y + + A S E +I +P+ NVDY YYL G++ + Sbjct: 74 IYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDVGLLARFLPLDMTKR 133 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 134 DPGAARDSYNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A + EAY L L + A + ++ YP Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELAATSLETLKLNYPD 242 >gi|218531128|ref|YP_002421944.1| outer membrane assembly lipoprotein YfiO [Methylobacterium chloromethanicum CM4] gi|254562116|ref|YP_003069211.1| lipoprotein UPF0169; exported protein [Methylobacterium extorquens DM4] gi|218523431|gb|ACK84016.1| outer membrane assembly lipoprotein YfiO [Methylobacterium chloromethanicum CM4] gi|254269394|emb|CAX25360.1| putative lipoprotein UPF0169; putative exported protein [Methylobacterium extorquens DM4] Length = 291 Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 129/227 (56%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + Y ++Y + + ++++++ A + F+Q + + ++ +RK LLM+A+ Sbjct: 36 EKYKPEAIPDTPADKLYSEGLAKMEDRDYENAAKQFDQLDKQYTYSDWSRKGLLMTAYAN 95 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y KY A + + Y+ ++P SK+ Y YL+ MS + I DV DQ ++ L + Sbjct: 96 YEGAKYDDAINASKRYLQRHPASKDAAYAQYLMAMSQYKQIPDVTRDQERSERALIALQE 155 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V++Y S Y A+ + + R+QLA KE+E+GR+YL++ + AAI RF+ V++ Y Sbjct: 156 LVQKYPTSEYAADAKAKIQITRDQLAGKEMEVGRFYLEKRAFPAAINRFRDVVSKYQTTR 215 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 HAEEA+ RLVEAY+AL L EA+ +++ +P W + L++ Sbjct: 216 HAEEALERLVEAYMALGLTGEAQTAAAVLGHNFPDSPWYQDAYKLLQ 262 >gi|293448947|ref|ZP_06663368.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli B088] gi|291322037|gb|EFE61466.1| outer membrane protein assembly complex subunit YfiO [Escherichia coli B088] Length = 245 Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 99/248 (39%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++ Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLARGYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A + Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|229588325|ref|YP_002870444.1| putative lipoprotein [Pseudomonas fluorescens SBW25] gi|229360191|emb|CAY47048.1| putative lipoprotein [Pseudomonas fluorescens SBW25] Length = 341 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 16/244 (6%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + + D V + + E+Y+ A L +++ A Sbjct: 6 LLLIAILAMTAACSSTK------DVVDENLSEVELYQLAQKDLDNNSYTSATAKLKALES 59 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +PF A ++ L + Y + + A S E +I +P+ NVDY YY+ G++ Sbjct: 60 RYPFGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQD 119 Query: 146 RDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + D A + +++ RY NS Y A+ + RN LA+ E+ Sbjct: 120 VGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYEIH 179 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + YYL R YVAA R + V+ N+ + + +A + EAY L L + A + ++ Sbjct: 180 VAHYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELASTSLETLKL 239 Query: 256 RYPQ 259 YP Sbjct: 240 NYPD 243 >gi|326387607|ref|ZP_08209213.1| DNA uptake lipoprotein [Novosphingobium nitrogenifigens DSM 19370] gi|326207653|gb|EGD58464.1| DNA uptake lipoprotein [Novosphingobium nitrogenifigens DSM 19370] Length = 268 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 71/242 (29%), Positives = 126/242 (52%), Gaps = 5/242 (2%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 SI + G + Y+ D +Y A L L + + A F++ R P Sbjct: 22 SIGLAGCAGGNKTKKDVAYVARDVDT-----LYMAAKLRLDQGDAKAAAALFDEVERQHP 76 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 ++ AR++ LMS+F Y A Y ++ + +++ +P +K+ Y YYLV + Y + I DV Sbjct: 77 YSPWARRAQLMSSFSYYMARDYAKSIQAAQRFLSIHPGNKDAPYAYYLVALCYYERISDV 136 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 DQ+ T+ LQ ++ ++ RY + Y A+ + + + LA KE+E+GR+Y + G+++A Sbjct: 137 TRDQKDTQQALQALNEVIRRYPATTYATDAKVKLDLVNDHLAGKEMEVGRFYERSGKWLA 196 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 RF+ V+ Y H EA+ RLVE Y++L + +EA++ +++ YP W Sbjct: 197 GTMRFRAVVDKYQQTSHTPEALYRLVECYLSLGIPEEAQKAAAVLGNNYPGNEWYERAFK 256 Query: 269 LV 270 L+ Sbjct: 257 LM 258 >gi|62181236|ref|YP_217653.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62128869|gb|AAX66572.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322715722|gb|EFZ07293.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 245 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 98/255 (38%), Gaps = 20/255 (7%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 + S+ FL G S++ D+ E+Y A L++ N+ + Sbjct: 1 MTHMKYLVAAATLSL---FLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQ 50 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A +PF +++ L + Y A + + ++ P N+DYV Y Sbjct: 51 AITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMY 110 Query: 136 LVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G++ + D + + S++V Y NS Y A + Sbjct: 111 MRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFL 170 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 +++LA E + YY RG +VA + R + +L NY D + +A+ + AY + L + Sbjct: 171 KDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQ 230 Query: 246 AREVVSLIQERYPQG 260 A +V +I Sbjct: 231 ADKVAKIIAANSKNT 245 >gi|254281628|ref|ZP_04956596.1| competence protein ComL [gamma proteobacterium NOR51-B] gi|219677831|gb|EED34180.1| competence protein ComL [gamma proteobacterium NOR51-B] Length = 307 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 16/258 (6%) Query: 13 EAWAYQLYK-FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71 + ++Y+ L + V L ++ DS ++++Y +A +L+ Sbjct: 8 RSSVNKMYRTLTLGALTACVVAMLAACSGNDELEMAADSG-----EQQIYLEAQRYLEND 62 Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 +F A +PF A ++ L F Y +++ A +I +P+ NVD Sbjct: 63 SFDLAIRTLQMLESRYPFGRYAEQAQLELVFAHYGGREFEAAIEAANRFIRLHPQHPNVD 122 Query: 132 YVYYLVGMSYAQMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 Y YY+ G++ + D D K L ++++ R+ +SPY AR Sbjct: 123 YAYYMKGLAAYDIDGGFLASLVPTDDTKRDVGHMKEALAEFAQLLARFPDSPYAPDARLR 182 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 + RN LA E+ + YY +RG Y+AA+ R + V+ N + +A + +AY+ L Sbjct: 183 MVHLRNMLARHEIHVANYYFRRGAYMAALNRGRYVVENLEQTPSVADGLAIMAQAYLLLG 242 Query: 242 LMDEAREVVSLIQERYPQ 259 L D A + + +++ YP Sbjct: 243 LDDLAIDTIEVLKANYPN 260 >gi|241760147|ref|ZP_04758245.1| competence lipoprotein ComL [Neisseria flavescens SK114] gi|241319601|gb|EER56031.1| competence lipoprotein ComL [Neisseria flavescens SK114] Length = 267 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 112/260 (43%), Gaps = 14/260 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K L + +A+ +T ++Y +A L N+++A + Sbjct: 1 MKKILLVVSLGLALSACANKGTIDKD----AQITQDWSVEKLYAEAQDELNSNNYTRAVK 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + FP A++S L +A+ Y + ++A + + +P+ N+DY YL G Sbjct: 57 LYEILESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIARFQRHHPQHPNMDYALYLKG 116 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + D +A + Q + +V+RY NS Y A + + Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANRDAYQAFAELVQRYPNSKYAADATERMAKLVDA 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ + RYY+KRG YVAA+ R Q ++A Y + + EEA+A + AY L A + Sbjct: 177 LGGNEMSVARYYMKRGAYVAAVNRAQKIVARYQNTRYVEEALAMMELAYKKLDKPQLAAD 236 Query: 249 VVSLIQERYPQGYWARYVET 268 +++ +PQ + ++ Sbjct: 237 TRRVLETNFPQSPFLQHEWR 256 >gi|126740309|ref|ZP_01755997.1| competence lipoprotein ComL, putative [Roseobacter sp. SK209-2-6] gi|126718445|gb|EBA15159.1| competence lipoprotein ComL, putative [Roseobacter sp. SK209-2-6] Length = 283 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 74/248 (29%), Positives = 122/248 (49%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A + +I V L G + +++E+ L A YF++ Sbjct: 8 AKFVGAAILVAALSGCGGDGGAGKERSIPLETYTPEQIFERGEFELARSRTKDAAYYFSE 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 R +P++ A+++L+M AF + + Y+ + + +I YP ++ Y YL+ +SY Sbjct: 68 IERLYPYSEYAKQALIMQAFAYHQSKDYENSRGAAQRFIDFYPTDEDAAYAQYLLALSYY 127 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 I +V DQ T LQ + ++E Y +S Y A + + LA KE+EIGRYYL+ Sbjct: 128 DQIDEVGRDQGLTFQALQSLLTVIEVYPDSEYANAAILKFDLAFDHLAGKEMEIGRYYLR 187 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 RG + +AI RF++V+ Y H EA+ RLVEAY++L L DEA+ +++ Y W Sbjct: 188 RGHFTSAINRFRVVVEEYQTTTHTPEALHRLVEAYLSLGLTDEAQTAGAILGHNYQSSEW 247 Query: 263 ARYVETLV 270 L+ Sbjct: 248 YEDSYRLL 255 >gi|320326248|gb|EFW82302.1| competence lipoprotein ComL [Pseudomonas syringae pv. glycinea str. B076] gi|320330672|gb|EFW86649.1| competence lipoprotein ComL [Pseudomonas syringae pv. glycinea str. race 4] gi|330881341|gb|EGH15490.1| competence lipoprotein ComL [Pseudomonas syringae pv. glycinea str. race 4] Length = 340 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 14/229 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 18 CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150 + Y G+ + A S E +I +P+ NVDY YY+ G++ Sbjct: 74 IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D A + +++ R+ NS Y A+ + R+ LA+ E+ + YYL R YVAA Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRSLLASYEIHVADYYLTRQAYVAAA 193 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|224825455|ref|ZP_03698560.1| outer membrane assembly lipoprotein YfiO [Lutiella nitroferrum 2002] gi|224602376|gb|EEG08554.1| outer membrane assembly lipoprotein YfiO [Lutiella nitroferrum 2002] Length = 256 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 15/244 (6%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 + L G D T ++Y +A L N+++A + + FP Sbjct: 1 MLVALSLAGCASNEPYDE-----TRSWTVEKLYAEARDELNSGNYTRAVKLYETLEARFP 55 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 + A++S + A+ Y + + A + + +I +P N+DYV YL G+ Y + Sbjct: 56 YGRYAQQSEMDLAYTHYKDNEPELAIAAADRFIKLHPTHPNLDYVLYLKGLVYYNDDSGL 115 Query: 149 ----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D RAT+ + R+ NS Y A + L E+ + R Sbjct: 116 LAKWAGQDMSERDPRATREAFLAFRELTSRFPNSQYSADAAEKMNKLIKALGGHEMHVAR 175 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YY+KRG Y+AA R Q V+ Y++ + EEA+A V AY L + + +++ YP Sbjct: 176 YYMKRGAYLAAAGRAQNVVKEYANTGYLEEALALTVTAYDKLGMPQLRDDARRVLELNYP 235 Query: 259 QGYW 262 + + Sbjct: 236 KSQY 239 >gi|296285037|ref|ZP_06863035.1| DNA uptake lipoprotein [Citromicrobium bathyomarinum JL354] Length = 268 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 129/256 (50%), Gaps = 3/256 (1%) Query: 19 LYKFALTIFFSIAV---CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 + A TI ++A+ LV S D+ R +Y A L N Sbjct: 1 MTANAKTIAAALALGTIATLVSGCAGSGSGGPGDTAYVARDVETLYATAKQRLDRGNPQL 60 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A F++ R P++ AR++ LMSAF Y + Y +A + +++ +P +K+ Y YY Sbjct: 61 AAALFDEVERQHPYSPWARRAQLMSAFSYYVSRDYSKAIQSAQRFLSIHPGNKDAPYAYY 120 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 L+ +SY + I DV DQ+ T+ L + + R+ S Y AR + + R+ LA KE++ Sbjct: 121 LIALSYYEQISDVQRDQKITEQALVALREVERRFPQSEYAADARLKIDLVRDHLAGKEMD 180 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 IGR+Y K G++ AA RFQ V+ NY HA EA+ RL E +AL + EA++ +++ Sbjct: 181 IGRFYEKSGKWTAAQIRFQNVVENYQTTSHAAEALYRLTETSLALGIPQEAKKYAAVLGA 240 Query: 256 RYPQGYWARYVETLVK 271 YP W LV+ Sbjct: 241 NYPGSEWYDKAYALVE 256 >gi|49475847|ref|YP_033888.1| competence lipoprotein comL precursor [Bartonella henselae str. Houston-1] gi|49238655|emb|CAF27901.1| Competence lipoprotein comL precursor [Bartonella henselae str. Houston-1] Length = 297 Score = 263 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 86/255 (33%), Positives = 136/255 (53%), Gaps = 1/255 (0%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDS-VTDVRYQREVYEKAVLFLKEQNFSKA 76 + + L + F + C L G + + + V + +Y +A+ L+ + A Sbjct: 17 NILRKVLGMIFLGSTCILAGCLFKEKNTLDPSAYVLKIDPPDVLYNQALASLESGRLADA 76 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + F + + + RKSL+M AF Y KY + S+ + YIT YPE+ + Y YY+ Sbjct: 77 SKKFLIIEKQYAYTDWGRKSLVMGAFTNYRLEKYDDSISMAQRYITLYPEADDAAYAYYI 136 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 +G+S + I DV DQR TK + M ++ERY NS YVK A+ + GR QLA KE+++ Sbjct: 137 IGLSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPNSEYVKDAKAKIRFGREQLAGKEMQV 196 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 GRYY + Y+AA RF+ V+ YSD EEA+ RL E +AL L EA+ +++ Sbjct: 197 GRYYEEGRRYLAASRRFRKVVEEYSDTNQIEEALFRLTEVNLALGLTLEAQTAAAILGRN 256 Query: 257 YPQGYWARYVETLVK 271 YP+ W ++ L++ Sbjct: 257 YPKSEWYKFSYNLLQ 271 >gi|260775125|ref|ZP_05884023.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio coralliilyticus ATCC BAA-450] gi|260608826|gb|EEX34988.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio coralliilyticus ATCC BAA-450] Length = 241 Score = 263 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 17/242 (7%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 T+ +A+ LVG SS ++ D E+Y +A + L+ N+ A + Sbjct: 5 TLSGLLALSVLVGCS--SSEEIVPDIPP-----SELYSEAQISLQSGNWLTAIDKLEALD 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +PF + + L + Y + E + P + +D+V Y+ G+++ Sbjct: 58 SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFSRLNPTHEKLDWVLYMRGLTHMAQ 117 Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 R+ D K +++ERY NSPY + A+ + +N+LA ++ Sbjct: 118 DRNFMHDLFNVDRSDRDPEPVKKAFADFKKLLERYPNSPYAEDAQKRMFALKNRLAEYDL 177 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +YL+R ++AAI R Q + Y D E A +++ +EAY L L D A+ LI+ Sbjct: 178 ATADFYLRREAWIAAINRTQELQKTYPDTEAARKSLEIQLEAYEKLGLEDAAKRTRQLIE 237 Query: 255 ER 256 Sbjct: 238 LN 239 >gi|300114964|ref|YP_003761539.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus watsonii C-113] gi|299540901|gb|ADJ29218.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus watsonii C-113] Length = 262 Score = 263 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 107/243 (44%), Gaps = 10/243 (4%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 F S+ + +G + + Y +A L ++ KA ++ Q Sbjct: 6 FLSLCLILWLGGCAWLGKSPPEEKPEADWTVERFYAEAKAALNAGDYQKAITFYEQLEAR 65 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-- 144 +PF A+++LL SA+ Y + + A + + +I YP + ++DY +YL G+ Sbjct: 66 YPFGVYAQQALLESAYAYYKFNEPESALAALDRFIRLYPLNSHMDYAHYLKGLVSFHRGV 125 Query: 145 --------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 + D + + L+ +++R+ +S Y + + + RN+LA E+ + Sbjct: 126 GIVERYIPRDETQRDPESARNALKSFKTLIQRFPDSKYAEDSAQRIVYLRNRLAQHEINV 185 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 YY++RG Y+ AI R + V+ NY EA+ + Y L L + + + +++ Sbjct: 186 AHYYMRRGAYIGAINRAKYVVENYQRTPPVPEALTIMARGYEILGLNELKEDTLRILELS 245 Query: 257 YPQ 259 +P Sbjct: 246 FPG 248 >gi|261380319|ref|ZP_05984892.1| competence lipoprotein ComL [Neisseria subflava NJ9703] gi|284796837|gb|EFC52184.1| competence lipoprotein ComL [Neisseria subflava NJ9703] Length = 267 Score = 263 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 14/260 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K L + +A+ +T ++Y +A L N+++A + Sbjct: 1 MKKILLVVSLGLALSACANKGTIDKD----AQITQDWSVEKLYAEAQDELNSNNYTRAVK 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + FP A++S L +A+ Y + ++A + + +P+ N+DY YL G Sbjct: 57 LYEILESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIARFQRHHPQHPNMDYALYLKG 116 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + D +A + Q + +V+RY NS Y A + + Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANRDAYQAFAELVQRYPNSKYAADATERMAKLVDA 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ + RYY+KRG YVAA R Q +++ Y + + EEA+A + AY L A + Sbjct: 177 LGGNEMSVARYYMKRGAYVAAANRAQKIVSRYQNTRYVEEALAMMELAYKKLDKPQLAAD 236 Query: 249 VVSLIQERYPQGYWARYVET 268 +++ +PQ + ++ Sbjct: 237 TRRVLETNFPQSPFLQHEWR 256 >gi|209963938|ref|YP_002296853.1| tetratricopeptide repeat family protein [Rhodospirillum centenum SW] gi|209957404|gb|ACI98040.1| tetratricopeptide repeat family protein [Rhodospirillum centenum SW] Length = 274 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 122/217 (56%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 R ++Y +A L +N+ KA F++ R P++ A ++ LM+A+ Y A +Y A Sbjct: 38 ERPVEQIYTEAANALDNENYLKAAALFDEVERQHPYSQWAVRAQLMAAYAHYEALRYDDA 97 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + + +I+ +P ++N Y YYL + Y + I DV DQ T+ L + + R+ + Sbjct: 98 ITTLDRFISLHPGNRNAAYAYYLKALCYYEQISDVRRDQSMTESALTALQDVARRFPATT 157 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y + A + + R+ LA K++E+GRYYL G+Y+AAI RF+ V+ Y H EA+ RL Sbjct: 158 YARDANLKLDLTRDHLAGKDMEVGRYYLVTGQYMAAIKRFRRVVDKYQTTSHVPEALHRL 217 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 EAY+AL ++DEA+ +L+ YP W + TL+ Sbjct: 218 TEAYLALGIVDEAQASAALLGHNYPGSDWYQRTYTLM 254 >gi|70732612|ref|YP_262375.1| competence lipoprotein ComL [Pseudomonas fluorescens Pf-5] gi|68346911|gb|AAY94517.1| competence lipoprotein ComL [Pseudomonas fluorescens Pf-5] Length = 341 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 14/229 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 SS++V +++++V E+Y++A L +++ A +PF A ++ L Sbjct: 18 CSSKEVVDENLSEV----ELYQQAQTDLDNHSYTSATAKLKALESRYPFGRYADQAQLEL 73 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PY 150 + Y + + A S E +I +P+ NVDY YYL G++ + Sbjct: 74 IYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDVGLLARFLPLDMTKR 133 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D A + +++ R+ NS Y A+ + RN LAA E+ + YYL R YVAA Sbjct: 134 DPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLAAYEIHVADYYLTRQAYVAAA 193 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A + EAY L L + A + ++ YP Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELAATSLETLKLNYPN 242 >gi|268593136|ref|ZP_06127357.1| competence lipoprotein ComL [Providencia rettgeri DSM 1131] gi|291311409|gb|EFE51862.1| competence lipoprotein ComL [Providencia rettgeri DSM 1131] Length = 243 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 104/251 (41%), Gaps = 20/251 (7%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 ++ S+ LVG V+ E+Y L++ NF Sbjct: 1 MIRMKNLVAAATLSL---ILVGCSST-------PEVSPDSTPAEIYATGQQKLQDGNFKA 50 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + F +PF A++ L + Y + + A + + ++ P N+DYV Y Sbjct: 51 AIKQFEALDNRYPFGPYAQQVQLDLIYAYYKSAELPMAIAAIDRFMRLNPTHPNIDYVLY 110 Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G++ + I D + ++ + S++V Y NS Y A + Sbjct: 111 MRGLTAMALDDSLLQGLFGIDRSDRDPQHARVAFKDFSQLVRYYPNSLYSNDASKRLVFL 170 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 +++LA ++ + YY KRG YVA + R Q +L +Y D E A+A + AY + L E Sbjct: 171 KDRLAKFDLSVVEYYNKRGAYVAVVNRVQQMLKDYPDTEATRNALAYMEIAYNEMGLNQE 230 Query: 246 AREVVSLIQER 256 A +V S+I Sbjct: 231 ANKVASIIAAN 241 >gi|152988068|ref|YP_001350516.1| competence protein ComL [Pseudomonas aeruginosa PA7] gi|150963226|gb|ABR85251.1| competence protein ComL [Pseudomonas aeruginosa PA7] Length = 341 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 10/229 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 ++V + + ++Y++A L ++++ A +PF A ++ L + Y Sbjct: 23 ETVDENLSESQLYQQAQDDLNNKSYNSAVTKLKALESRYPFGRYAEQAQLELIYANYKNM 82 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158 + + A + E +I +P+ NVDY YYL G+S R + D A + Sbjct: 83 EPEAARAAAERFIRLHPQHPNVDYAYYLKGLSSFDQDRGLVARFLPLDMTKRDPGAARDS 142 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 +++ R+ NS Y A+ + RN LAA EV +G YYLKR YVAA R + V+ Sbjct: 143 FNEFAQLTSRFPNSRYAPDAKARMVYLRNLLAAYEVHVGHYYLKRQAYVAAANRGRYVVE 202 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 N+ + + +A +VEAY L L D A + ++ YP + E Sbjct: 203 NFQETPAVGDGLAIMVEAYRRLGLDDLASTSLETLKLNYPDNASLKDGE 251 >gi|319638103|ref|ZP_07992867.1| competence lipoprotein comL [Neisseria mucosa C102] gi|317400748|gb|EFV81405.1| competence lipoprotein comL [Neisseria mucosa C102] Length = 267 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 14/260 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K L + +A+ +T ++Y +A L N+++A + Sbjct: 1 MKKILLVVSLGLALSACANKGTIDKD----AQITQDWSVEKLYAEAQDELNSNNYTRAVK 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + FP A++S L +A+ Y + ++A + + +P+ N+DY YL G Sbjct: 57 LYEILESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIARFQRHHPQHPNMDYALYLKG 116 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + D +A + Q + +V+RY NS Y A + + Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANRDAYQAFAELVQRYPNSKYAADATERMAKLVDA 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ + RYY+KRG YVAA R Q +++ Y + + EEA+A + AY L A + Sbjct: 177 LGGNEMSVARYYMKRGAYVAAANRAQKIVSRYQNTRYVEEALAMMELAYKKLDKPQLAAD 236 Query: 249 VVSLIQERYPQGYWARYVET 268 +++ +PQ + ++ Sbjct: 237 THRVLETNFPQSPFLQHEWR 256 >gi|240139704|ref|YP_002964181.1| putative lipoprotein UPF0169; putative exported protein [Methylobacterium extorquens AM1] gi|240009678|gb|ACS40904.1| putative lipoprotein UPF0169; putative exported protein [Methylobacterium extorquens AM1] Length = 291 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 129/227 (56%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + Y ++Y + + ++++++ A + F+Q + + ++ +RK LLM+A+ Sbjct: 36 EKYKPEAIPDTPADKLYSEGLAKMEDRDYENAAKQFDQLDKQYTYSDWSRKGLLMAAYAN 95 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y KY A + + Y+ ++P SK+ Y YL+ MS + I DV DQ ++ L + Sbjct: 96 YEGAKYDDAINASKRYLQRHPASKDAAYAQYLMAMSQYKQIPDVTRDQERSERALIALQE 155 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V++Y S Y A+ + + R+QLA KE+E+GR+YL++ + AAI RF+ V++ Y Sbjct: 156 LVQKYPTSEYAADAKAKIQITRDQLAGKEMEVGRFYLEKRAFPAAINRFRDVVSKYQTTR 215 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 HAEEA+ RLVEAY+AL L EA+ +++ +P W + L++ Sbjct: 216 HAEEALERLVEAYMALGLTGEAQTAAAVLGHNFPDSPWYQDAYKLLQ 262 >gi|325981784|ref|YP_004294186.1| outer membrane assembly lipoprotein YfiO [Nitrosomonas sp. AL212] gi|325531303|gb|ADZ26024.1| outer membrane assembly lipoprotein YfiO [Nitrosomonas sp. AL212] Length = 268 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 104/258 (40%), Gaps = 23/258 (8%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 L+ AL + ++ C L+ D + Y +A L + ++ A + Sbjct: 2 LHSLALFLVLGLSACGLLPDRTDDQED---------WSANKFYSEAKEKLNDGSYPAAIK 52 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + +P+ +A+++ L A+ Y + A + + +I +P NVDY YY+ G Sbjct: 53 LYETLESRYPYGRIAQQAQLEVAYAHYKNDEPASAIAAADRFIKLHPNHANVDYAYYIKG 112 Query: 139 MSYAQ--------------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 ++ D +A+ + +V R+ S Y +R + Sbjct: 113 LANFNEGWGMLGFLLKGPFKQDMSERDPKASYESFEIFKELVTRFPESKYAADSRQRMAY 172 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 N LA E+ RYY+KR Y+AA R Q + Y EEA+ ++ AY AL + D Sbjct: 173 LLNLLAMGEIHTARYYMKRKAYIAAANRAQNAVKEYPPTPATEEALYIMIRAYEALEMYD 232 Query: 245 EAREVVSLIQERYPQGYW 262 + +++ +P + Sbjct: 233 LRDDAERVMRINFPNSIF 250 >gi|33592278|ref|NP_879922.1| competence lipoprotein precursor [Bordetella pertussis Tohama I] gi|33597726|ref|NP_885369.1| competence lipoprotein precursor [Bordetella parapertussis 12822] gi|33602574|ref|NP_890134.1| competence lipoprotein precursor [Bordetella bronchiseptica RB50] gi|33571923|emb|CAE41443.1| competence lipoprotein precursor [Bordetella pertussis Tohama I] gi|33574154|emb|CAE38484.1| competence lipoprotein precursor [Bordetella parapertussis] gi|33577013|emb|CAE34093.1| competence lipoprotein precursor [Bordetella bronchiseptica RB50] gi|332381695|gb|AEE66542.1| competence lipoprotein precursor [Bordetella pertussis CS] Length = 266 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 64/253 (25%), Positives = 112/253 (44%), Gaps = 15/253 (5%) Query: 22 FALTIFFSIAVCFLV-GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 AL +++ +V G S++ T ++Y A + N++ A E Sbjct: 1 MALRAAIALSTILIVAGCGSSSTKYDK----TAGWSAEQLYADAKQEVAAGNWTDARERL 56 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG-- 138 +PF A+++L+ A+V + G+ +QA + + + YP DYV YL G Sbjct: 57 TAIESRYPFGTYAQQALIELAYVNWKDGENEQALAAIDRFQQLYPNHPGTDYVLYLKGLV 116 Query: 139 --------MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 MS D + + + +V+R+ NS Y A+ +T N +A Sbjct: 117 NFTPASAFMSNLTGQDPAERDPKGLRASYDAFNELVQRFPNSKYTPDAQKRMTWLVNAIA 176 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 EV + RYY +RG YVAA R Q V+ ++ A +EEA+ +VE+Y L + + + Sbjct: 177 MNEVHVARYYYERGAYVAAANRAQTVITDFEGAPASEEALYIMVESYDKLGMTELKGDAE 236 Query: 251 SLIQERYPQGYWA 263 ++ + YP + Sbjct: 237 RVLDQNYPNSKFK 249 >gi|168239431|ref|ZP_02664489.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736160|ref|YP_002115674.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194711662|gb|ACF90883.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197287865|gb|EDY27253.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 245 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 99/252 (39%), Gaps = 17/252 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + ++ P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y +S Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPHSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY RG +VA + R + +L NY D + +A+ + AY + L +A + Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233 Query: 249 VVSLIQERYPQG 260 V +I Sbjct: 234 VAKIIAANSKNT 245 >gi|322831461|ref|YP_004211488.1| outer membrane assembly lipoprotein YfiO [Rahnella sp. Y9602] gi|321166662|gb|ADW72361.1| outer membrane assembly lipoprotein YfiO [Rahnella sp. Y9602] Length = 244 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 55/248 (22%), Positives = 105/248 (42%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + LVG SS++ D+ +V +Y A L++ NF A Sbjct: 1 MTRVKYLVAAATLSLALVGCS--SSKETVPDNPPNV-----LYATAQQKLQDGNFKGAIA 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y + A + + ++ P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPMAQASIDRFMRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + + S+++ Y NS Y A + +++ Sbjct: 114 LTDMALDDSALQGFFGVDRSDRDPQHARAAFRDFSQLIHTYPNSQYATDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + +YY KRG YVA + R + +L +Y D + +A+ + AY L L +A + Sbjct: 174 LAKYELSVVQYYTKRGAYVAVVNRVEQMLKDYPDTKATHDALPLMENAYRELQLNTQADK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|320182490|gb|EFW57384.1| outer membrane protein assembly complex subunit YfiO [Shigella boydii ATCC 9905] Length = 245 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 101/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDAAKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY +RG +VA + R + +L +YSD + +A+ + AY + + +A + Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYSDTQATRDALPLMENAYRQMQINAQAEK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|145297341|ref|YP_001140182.1| ComL family lipoprotein [Aeromonas salmonicida subsp. salmonicida A449] gi|142850113|gb|ABO88434.1| lipoprotein, ComL family [Aeromonas salmonicida subsp. salmonicida A449] Length = 257 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 17/248 (6%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + ++ + G S++ D + +Y+KA L L N+ A E Sbjct: 13 LLMSLALVATLITGCS--STKPKVPDEPPET-----LYQKARLKLDAGNYVNAIELLEAL 65 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-- 141 +PF + + L + Y QA + + +I P KN+DYV+Y+ G++ Sbjct: 66 DSRYPFGAYSNQVQLDLIYAYYKQDDTAQAIANIDRFIRLNPAHKNIDYVFYMRGLTNMA 125 Query: 142 --AQMIRDV------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 +D D + Q +++ Y NS Y AR + +N+LA + Sbjct: 126 GDYNFFQDFLGINRDDKDPSYARQAFQDFKTLLQNYPNSVYAADARARMIGLKNRLARYD 185 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + YY+KR +AA R +L++ Y D E+A+ +VE+Y L + A+ ++ Sbjct: 186 LSVAEYYVKRDALIAAANRAKLIVETYPDTAETEKALEIMVESYDTLKMPTLAQHAREVL 245 Query: 254 QERYPQGY 261 + YP Sbjct: 246 AKNYPDNR 253 >gi|159044955|ref|YP_001533749.1| hypothetical protein Dshi_2414 [Dinoroseobacter shibae DFL 12] gi|157912715|gb|ABV94148.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12] Length = 279 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 79/260 (30%), Positives = 126/260 (48%), Gaps = 9/260 (3%) Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70 + + AL + +A C + ++ +A L+ Sbjct: 1 MTRVGTLRNRMLALGLAVILAACG---------SQQPEFPALEESPPDVIFNRAEFELQA 51 Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 N +A YF + R +PF+ A+++L+M AF + +Y+ + + + Y+ YP ++ Sbjct: 52 NNLDEAARYFGEVERLYPFSEFAKRALIMQAFTYHRNREYESSRAAAQRYLDFYPADEDA 111 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 Y YL+ +SY I DV DQ T LQ + ++E Y S Y K + + N LA Sbjct: 112 AYAQYLLALSYYDQIDDVGRDQGLTFQALQALRTVIEVYPESSYAKSSILKFDLAFNHLA 171 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 AKE+EIGRYYLKRG Y AAI RF++V+ ++ H EA+ RLVEAY++L L EA+ Sbjct: 172 AKEMEIGRYYLKRGHYAAAINRFRVVVEDFQTTTHTPEALHRLVEAYLSLGLEGEAQTAG 231 Query: 251 SLIQERYPQGYWARYVETLV 270 +++ Y W L+ Sbjct: 232 AILGFNYQATDWYEDSFRLL 251 >gi|15599741|ref|NP_253235.1| competence protein ComL [Pseudomonas aeruginosa PAO1] gi|107099792|ref|ZP_01363710.1| hypothetical protein PaerPA_01000810 [Pseudomonas aeruginosa PACS2] gi|116052690|ref|YP_793006.1| competence protein ComL [Pseudomonas aeruginosa UCBPP-PA14] gi|218893640|ref|YP_002442509.1| competence protein ComL [Pseudomonas aeruginosa LESB58] gi|254238707|ref|ZP_04932030.1| competence protein ComL [Pseudomonas aeruginosa C3719] gi|254244557|ref|ZP_04937879.1| competence protein ComL [Pseudomonas aeruginosa 2192] gi|296391366|ref|ZP_06880841.1| competence protein ComL [Pseudomonas aeruginosa PAb1] gi|12231047|sp|P33641|Y9F5_PSEAE RecName: Full=UPF0169 lipoprotein PA4545; AltName: Full=ORFY; Flags: Precursor gi|9950789|gb|AAG07933.1|AE004868_4 competence protein ComL [Pseudomonas aeruginosa PAO1] gi|32423743|gb|AAP81267.1| competence protein [Pseudomonas aeruginosa PA14] gi|115587911|gb|ABJ13926.1| competence lipoprotein ComL [Pseudomonas aeruginosa UCBPP-PA14] gi|126170638|gb|EAZ56149.1| competence protein ComL [Pseudomonas aeruginosa C3719] gi|126197935|gb|EAZ61998.1| competence protein ComL [Pseudomonas aeruginosa 2192] gi|218773868|emb|CAW29682.1| competence protein ComL [Pseudomonas aeruginosa LESB58] Length = 341 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 10/229 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 ++V + + ++Y++A L ++++ A +PF A ++ L + Y Sbjct: 23 ETVDENLSESQLYQQAQDDLNNKSYNSAVTKLKALESRYPFGRYAEQAQLELIYANYKNM 82 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158 + + A + E +I +P+ NVDY YYL G+S R + D A + Sbjct: 83 EPEAARAAAERFIRLHPQHPNVDYAYYLKGLSSFDQDRGLLARFLPLDMTKRDPGAARDS 142 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 +++ R+ NS Y A+ + RN LAA EV +G YYLKR YVAA R + V+ Sbjct: 143 FNEFAQLTSRFPNSRYAPDAKARMVYLRNLLAAYEVHVGHYYLKRQAYVAAANRGRYVVE 202 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 N+ + + +A +VEAY L L D A + ++ YP + E Sbjct: 203 NFQETPAVGDGLAIMVEAYRRLGLDDLASTSLETLKLNYPDNASLKDGE 251 >gi|154244287|ref|YP_001415245.1| putative lipoprotein [Xanthobacter autotrophicus Py2] gi|154158372|gb|ABS65588.1| putative lipoprotein [Xanthobacter autotrophicus Py2] Length = 284 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 77/231 (33%), Positives = 124/231 (53%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 D + ++Y + + L+ Q KA + F + P++ ARKSLLM+ Sbjct: 30 TGCASDKDDVLPPDEPAEKIYNEGLTLLRRQEPEKAAKRFEDVDKTHPYSEWARKSLLMT 89 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + + AGKY +A + G+ YI YP S++ Y +YLV + + I D+ DQR T+ L Sbjct: 90 TYAYFEAGKYDEAIATGKRYIALYPGSQDAAYAHYLVASALYENIPDITRDQRKTRQALD 149 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 + + +Y N+ Y A+ + V R+QLA KE+ IGRYYL++ Y AI RF++V+ Y Sbjct: 150 ALEDVARKYPNTEYAATAKKKIEVARDQLAGKEMLIGRYYLEQRNYTGAINRFKVVVTQY 209 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 EEA+ RL EAY+AL ++ EA+ +++ +P W + LV+ Sbjct: 210 QTTRQVEEALYRLTEAYMALGVVSEAQTAAAVLGYNFPDSSWYKDAYKLVQ 260 >gi|257481619|ref|ZP_05635660.1| competence lipoprotein ComL [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 266 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 14/229 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 18 CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150 + Y G+ + A S E +I +P+ NVDY YY+ G++ Sbjct: 74 IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|313107190|ref|ZP_07793389.1| competence protein ComL [Pseudomonas aeruginosa 39016] gi|310879891|gb|EFQ38485.1| competence protein ComL [Pseudomonas aeruginosa 39016] Length = 341 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 10/229 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 ++V + + ++Y++A L ++++ A +PF A ++ L + Y Sbjct: 23 ETVDENLSESQLYQQAQDDLNNKSYNSAVTKLKALESRYPFGRYAEQAQLELIYANYKNM 82 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158 + + A + E +I +P+ NVDY YYL G+S R + D A + Sbjct: 83 EPEAARAAAERFIRLHPQHPNVDYAYYLKGLSSFDQDRGLLARFLPLDMTKRDPGAARDS 142 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 +++ R+ NS Y A+ + RN LAA EV +G YYLKR YVAA R + V+ Sbjct: 143 FNEFAQLTSRFPNSRYAPDAKARMVYLRNLLAAYEVHVGHYYLKRQAYVAAANRGRYVVE 202 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 N+ + + +A +VEAY L L D A + ++ YP + E Sbjct: 203 NFQETPAVGDGLAIMVEAYRRLGLDDLASTSLETLKLNYPDNASLKDGE 251 >gi|225076528|ref|ZP_03719727.1| hypothetical protein NEIFLAOT_01576 [Neisseria flavescens NRL30031/H210] gi|224952207|gb|EEG33416.1| hypothetical protein NEIFLAOT_01576 [Neisseria flavescens NRL30031/H210] Length = 267 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 14/260 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K L + +A+ +T ++Y +A L N+++A + Sbjct: 1 MKKILLVVSLGLALSACANKGTIDKD----AQITQDWSVEKLYAEAQDELNSNNYTRAVK 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + FP A++S L +A+ Y + ++A + + +P+ N+DY YL G Sbjct: 57 LYEILESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIARFQRHHPQHPNMDYALYLKG 116 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + D +A + Q + +V+RY NS Y A + + Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANRDAYQAFAELVQRYPNSKYAADATERMAKLVDA 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ + RYY+KRG YVAA R Q +++ Y + + EEA+A + AY L A + Sbjct: 177 LGGNEISVARYYMKRGAYVAAANRAQKIVSRYQNTRYVEEALAMMELAYKKLDKPQLAAD 236 Query: 249 VVSLIQERYPQGYWARYVET 268 +++ +PQ + ++ Sbjct: 237 TRRVLETNFPQSPFLQHEWR 256 >gi|163746142|ref|ZP_02153501.1| competence lipoprotein ComL, putative [Oceanibulbus indolifex HEL-45] gi|161380887|gb|EDQ05297.1| competence lipoprotein ComL, putative [Oceanibulbus indolifex HEL-45] Length = 288 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 73/248 (29%), Positives = 123/248 (49%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A+ + ++A C S + + +++E+ L N +A YF + Sbjct: 13 AVLLIATLAACGGGDGRSDGSFFNPQEIPLETYSAEQIFERGEYELTNNNPGEAAFYFAE 72 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 R +P++ A+++L+M AF + Y + S + +I YP + Y YL+ +SY Sbjct: 73 IERLYPYSEWAKRALIMQAFAYHKDQDYPNSRSAAQRFIDFYPAEDDAAYAQYLLALSYY 132 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 I +V DQ T LQ + ++E Y +S Y + A + + LA KE+EIGRYYL+ Sbjct: 133 DQIDEVGRDQGLTFQALQSLRAVIEGYPDSEYARSAILKFDLAFDHLAGKEMEIGRYYLR 192 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 R Y AAI RF++V+ ++ H EA+ RLVE+Y++L L EA+ +++ Y W Sbjct: 193 RDHYTAAINRFRVVVEDFQTTTHTAEALHRLVESYLSLGLDKEAQTAGAILGHNYRGSEW 252 Query: 263 ARYVETLV 270 L+ Sbjct: 253 YEDSYKLL 260 >gi|259418921|ref|ZP_05742838.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B] gi|259345143|gb|EEW56997.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B] Length = 283 Score = 262 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 77/248 (31%), Positives = 121/248 (48%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A I + L +V ++YE+ L A YF++ Sbjct: 8 AKGIGVVALMATLAACGGADGDAQRSGQDLEVFTPAQIYERGEFELARNREQDAAYYFSE 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 R +P++ A++SL+M AF + A Y+ + S + YI YP ++ Y YL+ +SY Sbjct: 68 VERLYPYSEWAKQSLIMQAFTYHQAEDYENSRSAAQRYIDFYPTDEDAAYAQYLLALSYY 127 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 I +V DQ T LQ + ++E Y +S Y A + + LA KE+EIGRYYLK Sbjct: 128 DQIDEVGRDQGLTFQALQALRTVIEVYPDSEYASSAILKFDLAFDHLAGKEMEIGRYYLK 187 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 R Y AAI RF++V+ ++ H EA+ RL+EAY++L L DEA+ +++ + W Sbjct: 188 RQHYTAAINRFRVVVEDFQTTSHTAEALYRLIEAYLSLGLTDEAQSAGAILGHNFQSTDW 247 Query: 263 ARYVETLV 270 L+ Sbjct: 248 YEDGYKLL 255 >gi|329890234|ref|ZP_08268577.1| competence lipoprotein comL [Brevundimonas diminuta ATCC 11568] gi|328845535|gb|EGF95099.1| competence lipoprotein comL [Brevundimonas diminuta ATCC 11568] Length = 287 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 5/262 (1%) Query: 12 FEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71 A + + ++A L R + R +Y L+ + Sbjct: 3 SPLLASKSRTGLTLLTVAVAALSLSACAGNKPRQKL---AYEERPVEALYNTGYQRLQSK 59 Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 + A +YF + R P++ AR+++LM + Y YQ A + + +I +P + + Sbjct: 60 RWMDAVDYFQEVERQHPYSEWARRAILMQVYAYYQNNNYQDAIAAADRFIALFPGNPSAS 119 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Y +Y+ + + I DV DQ + L + +V RY S Y AR + + +QLA Sbjct: 120 YAFYMKAVCNFEQIVDVGRDQGYAEAALAGLRDVVRRYPGSSYATDARVKIDMVNDQLAG 179 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAYVALALMDEAREV 249 KE+ +GRYY + + + A+ R++ V+ N + H EA+ RLVE ++L L +EA Sbjct: 180 KEMTVGRYYQRANQPLGALNRYKAVINNPDFQRTSHTPEALYRLVEVNLSLGLTEEATRN 239 Query: 250 VSLIQERYPQGYWARYVETLVK 271 +++ YP W L++ Sbjct: 240 AAVLGHNYPGSPWYAEAFALLR 261 >gi|254517172|ref|ZP_05129230.1| competence protein ComL [gamma proteobacterium NOR5-3] gi|219674677|gb|EED31045.1| competence protein ComL [gamma proteobacterium NOR5-3] Length = 280 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 14/236 (5%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 F+ G + D D D ++++Y++A +L +NF A +PF A Sbjct: 2 FVGGCA---NNDEDGDIAAD-SGEQQIYDEAQRYLNARNFDLAIRALQALESRYPFGRYA 57 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---- 149 ++ L + Y A + A + +I +P+ NVDY YY+ G++ A +D Sbjct: 58 EQAQLELIYAHYGAYSPEAAIEAADRFIRLHPQHPNVDYAYYMKGLATATASQDFLSRFT 117 Query: 150 ------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 D K S++V R+ NSPY A+ + RN LA E+ + YY +R Sbjct: 118 PTDKTLRDTSFAKEAFAEFSQLVTRFPNSPYASDAKSRMVYLRNLLARNEIHVANYYFRR 177 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 G Y+AA R + V+ N+ + +A + + Y+ L + D A+ + + YP+ Sbjct: 178 GAYLAAANRGRYVVENFQGTPAVGDGLAVMAQGYLILGMNDLAQNAIDTLALNYPE 233 >gi|188534768|ref|YP_001908565.1| outer membrane protein assembly complex subunit YfiO [Erwinia tasmaniensis Et1/99] gi|188029810|emb|CAO97691.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99] Length = 243 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 15/228 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 S+DV DS E+Y A L++ NF A +PF +++ L Sbjct: 19 GCSGSKDVVPDSPP-----SEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQL 73 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDV 148 + Y A + + ++ P N+DYV Y+ G++ + I Sbjct: 74 DLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRS 133 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D + + S+++ Y NS Y A + +++LA E+ + +Y KRG YVA Sbjct: 134 DRDPTHARDAFKDFSQLLRGYPNSQYATDAHKRLVFLKDRLAKYELSVVEFYTKRGAYVA 193 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 + R + +L +Y D + +A+ + AY L L +A V +I Sbjct: 194 VVNRVEQMLKDYPDTQATHKALPLMENAYRQLQLNSQAERVAKIIAAN 241 >gi|319425421|gb|ADV53495.1| beta barrel protein translocation component, BamC [Shewanella putrefaciens 200] Length = 253 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 97/253 (38%), Gaps = 14/253 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +YKF+ + + L + + +Y +A ++ N++KA Sbjct: 1 MYKFSKGVTLVLFSLALSACSSSPDDN----DIAAKTSPDVLYSQARTSMELGNYAKAVR 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 FPF + L + Y + + +I P N+DYVYY+ G Sbjct: 57 SLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDRFIRLNPTHPNIDYVYYMRG 116 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + Q I D + + + R+++ Y NS Y A+ + +N+ Sbjct: 117 LVNMQADNYLFHDMLSIDRTDRDPKNAQDAFKDFDRLIKTYPNSKYAADAQKRMFSLKNR 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA +++ YYLK + AA R Q VL Y E A+ ++EAY L + Sbjct: 177 LAKYSIQVAEYYLKMNAWSAAAIRAQSVLETYPGTPSTERALEIMIEAYGELGQNQLKQN 236 Query: 249 VVSLIQERYPQGY 261 V+ ++Q YP Sbjct: 237 VLMVMQANYPNNE 249 >gi|83949542|ref|ZP_00958275.1| competence lipoprotein ComL, putative [Roseovarius nubinhibens ISM] gi|83837441|gb|EAP76737.1| competence lipoprotein ComL, putative [Roseovarius nubinhibens ISM] Length = 283 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 72/251 (28%), Positives = 129/251 (51%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 K I + L G R D + + ++E+ L +N+ A + Sbjct: 5 TKRVTLIGAVLVASLLAGCNSIRGRVERGDLDYENYTAQHIFERGEYDLSRRNYDLAAQS 64 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F + R +P++ + +++++M A+ + Y+ + S + YI YP ++ Y YL+ + Sbjct: 65 FGEIERLYPYSELTKRAVIMQAYSHHLDKDYEASRSAAQRYIDFYPTDEDAAYAQYLLAL 124 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 SY I +V DQ T L LQ + +++E Y +S Y + A + + LA+KE+E+GRY Sbjct: 125 SYYDQIDEVGRDQGLTFLALQELRKVIEIYPDSEYARSAILKFDLAFDHLASKEMEVGRY 184 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YLKR + AAI RF++V+ ++ H EA+ RLVEAY++L L++EA+ +++ + Sbjct: 185 YLKRDHFSAAINRFRVVVEDFQTTSHTPEALHRLVEAYLSLGLVNEAQTAAAILGHNFRA 244 Query: 260 GYWARYVETLV 270 W L+ Sbjct: 245 TDWYEDSYALL 255 >gi|77461058|ref|YP_350565.1| competence lipoprotein ComL, putative [Pseudomonas fluorescens Pf0-1] gi|77385061|gb|ABA76574.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1] Length = 338 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 10/221 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + V + + E+Y++A L +++ A +PF A ++ L + Y Sbjct: 22 EVVDENLSEAELYQQAQQDLDNNSYTSATAKLKALESRYPFGRYADQAQLELIYANYKNA 81 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158 + + A S E +I +P+ NVDY YYL G++ + D A + Sbjct: 82 EPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDVGLLARFLPLDMTKRDPGAARDS 141 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 +++ RY NS Y A+ + RN LAA E+ + YYL R YVAA R + V+ Sbjct: 142 YNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLAAYEIHVADYYLTRQAYVAAANRGRYVVE 201 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 N+ + + +A + EAY L L + A + ++ YP Sbjct: 202 NFQETPSVGDGLAVMTEAYQRLHLDELAATSLETLKLNYPN 242 >gi|156932862|ref|YP_001436778.1| outer membrane protein assembly complex subunit YfiO [Cronobacter sakazakii ATCC BAA-894] gi|156531116|gb|ABU75942.1| hypothetical protein ESA_00659 [Cronobacter sakazakii ATCC BAA-894] Length = 245 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 49/232 (21%), Positives = 93/232 (40%), Gaps = 15/232 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 S++ D+ E+Y A L++ N+ A +PF +++ L Sbjct: 19 GCSGSKEEVPDNPP-----SEIYATAQQKLQDGNWKAAITQLEALDNRYPFGPYSQQVQL 73 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148 + Y A + + +I P N+DYV Y+ G++ + Sbjct: 74 DLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVIYMRGLTNMALDDSALQGFFGVDRS 133 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D + + + S++V Y S Y A + +++L+ E+ + +YY KRG +VA Sbjct: 134 DRDPQHARDAFRDFSKLVRGYPQSQYATDATKRLVYLKDRLSKYELSVAQYYTKRGAWVA 193 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + R + +L +Y D + E + + AY L L +A +V +I Sbjct: 194 VVNRVEGMLRDYPDTQATHEGLGLMENAYRELQLNAQADKVAKIIAANNTGS 245 >gi|187929000|ref|YP_001899487.1| outer membrane assembly lipoprotein YfiO [Ralstonia pickettii 12J] gi|187725890|gb|ACD27055.1| outer membrane assembly lipoprotein YfiO [Ralstonia pickettii 12J] Length = 258 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 58/247 (23%), Positives = 108/247 (43%), Gaps = 14/247 (5%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 +A + + T ++Y +A L +++KA +Y+ + +P Sbjct: 3 GVACLAISACGILPEQQDE----TAGWSANKLYSEAKDSLDGGDYAKAVKYYEKLESRYP 58 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---- 144 F A+++ + +A+ Y G+ A + + +I +P +VDY YYL G+ Sbjct: 59 FGQYAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLKGLINFNDNLGW 118 Query: 145 ------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D +A + ++ R+ NS Y A + N +A EV R Sbjct: 119 LGRFSNQDLSERDPKAARAAYDAFKTLITRFPNSKYTPDATQRMQYIVNAMAEHEVGAAR 178 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YY +RG Y+AA+ R Q + +Y A EEA+ ++++Y AL + D + +I++ YP Sbjct: 179 YYYRRGAYLAAVNRAQDAIKDYDRAPAVEEALYIMMKSYEALGMKDMRDDTERIIKQNYP 238 Query: 259 QGYWARY 265 + + Y Sbjct: 239 KSDFLAY 245 >gi|126729262|ref|ZP_01745076.1| competence lipoprotein ComL, putative [Sagittula stellata E-37] gi|126710252|gb|EBA09304.1| competence lipoprotein ComL, putative [Sagittula stellata E-37] Length = 265 Score = 261 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 72/237 (30%), Positives = 123/237 (51%), Gaps = 1/237 (0%) Query: 35 LVGWERQSSRDVYLD-SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + G +DV D + +++YE+ + +++ YF + R +P++ A Sbjct: 1 MSGCGELKRKDVGPDGQPLETYTAKQIYERGEYEMSRKDYEDGAFYFGEVERLYPYSDWA 60 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 +++L+M A+ + Y+ A + YI YP + Y YL+ +SY I V DQ Sbjct: 61 KRALIMQAYSYHKNKDYENARGAAQRYIDFYPSDDDAAYAQYLLALSYYDQIELVGRDQG 120 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 T LQ + ++ERY +S Y + + + + LA KE+EIGRYYLKR + AAI RF Sbjct: 121 LTFQALQALRAVIERYPDSEYARSSILKFDLAFDHLAGKEMEIGRYYLKRDHFGAAISRF 180 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 ++V+ ++ H EA+ RLVEAY++L L++EA+ +++ Y W L+ Sbjct: 181 RVVVEDFQTTTHTPEALHRLVEAYLSLGLVEEAQTAAAILGYNYQSTEWYEDSYQLL 237 >gi|120599939|ref|YP_964513.1| putative lipoprotein [Shewanella sp. W3-18-1] gi|146292125|ref|YP_001182549.1| putative lipoprotein [Shewanella putrefaciens CN-32] gi|120560032|gb|ABM25959.1| putative lipoprotein [Shewanella sp. W3-18-1] gi|145563815|gb|ABP74750.1| putative lipoprotein [Shewanella putrefaciens CN-32] Length = 253 Score = 261 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 96/253 (37%), Gaps = 14/253 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +YKF+ + + S + +Y +A ++ N++KA Sbjct: 1 MYKFSKGVTLVL----FSLALSACSSSPDDSDIAAKTSPDVLYSQARTSMELGNYAKAVR 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 FPF + L + Y + + +I P N+DYVYY+ G Sbjct: 57 SLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDRFIRLNPTHPNIDYVYYMRG 116 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + Q I D + + + R+++ Y NS Y A+ + +N+ Sbjct: 117 LVNMQADNYLFHDMLSIDRTDRDPKNAQDAFKDFDRLIKTYPNSKYAADAQKRMFSLKNR 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA +++ YYLK + AA R Q VL Y E A+ ++EAY L + Sbjct: 177 LAKYSIQVAEYYLKMNAWSAAAIRAQSVLETYPGTPSTERALEIMIEAYGELGQNQLKQN 236 Query: 249 VVSLIQERYPQGY 261 V+ ++Q YP Sbjct: 237 VLMVMQANYPNNE 249 >gi|304399172|ref|ZP_07381039.1| outer membrane assembly lipoprotein YfiO [Pantoea sp. aB] gi|304353226|gb|EFM17606.1| outer membrane assembly lipoprotein YfiO [Pantoea sp. aB] Length = 243 Score = 261 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 101/251 (40%), Gaps = 20/251 (7%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 ++ S+A+ G S D D+ E+Y A L++ NF Sbjct: 1 MTRMKHLVAAATLSLALVGCSG-----SNDAVPDNPP-----SEIYATAQQKLQDGNFKA 50 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + +PF +++ L + Y A + ++ P N+DYV Y Sbjct: 51 AIKQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIARFMRLNPTHPNIDYVIY 110 Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G++ + I D + + S+++ Y NS Y A+ + Sbjct: 111 MKGLTDMALDDSALQGFFGIDRSDRDPTHARDAFRDFSQLLRNYPNSQYAADAQKRLVYL 170 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 +++LA E+ + ++Y KR YVA + R + ++ +Y D + +A+ + AY L L E Sbjct: 171 KDRLAKYELSVAQFYTKREAYVAVVNRVEGMMRDYPDTQATHDALPLMENAYRNLQLNAE 230 Query: 246 AREVVSLIQER 256 A +V +I Sbjct: 231 ADKVAKIIAVN 241 >gi|293604135|ref|ZP_06686543.1| competence lipoprotein ComL [Achromobacter piechaudii ATCC 43553] gi|292817360|gb|EFF76433.1| competence lipoprotein ComL [Achromobacter piechaudii ATCC 43553] Length = 262 Score = 261 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 14/251 (5%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + AV + G +S+ T ++Y A + + +A E Sbjct: 3 VVIALFAVIVIAGCGSTNSKYDK----TTNWSAEQLYADAKSEMSSGGWKEARERLTAIE 58 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ- 143 +PF A+++LL A+V + G+ +QA + + + YP DY YL G+ Sbjct: 59 SRYPFGVYAQQALLELAYVNWKDGENEQALAAIDRFQQLYPNHPGTDYALYLKGLINFTP 118 Query: 144 ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 D + + + +++RY +S Y A + N +A EV Sbjct: 119 ASAFMTSITGQDPAERDPKGLRASYDAFNELIKRYPDSKYSVDAEKRIAWLVNTIAMNEV 178 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 + RYY +RG YVAA R Q V+ ++ A EEA+ +VE+Y L + D + + Sbjct: 179 HVARYYYERGAYVAAANRAQTVITDFEGAPATEEALYLMVESYDKLGMTDLKNDAQRVYD 238 Query: 255 ERYPQGYWARY 265 + +P + Sbjct: 239 KNFPNSDFKSK 249 >gi|260577083|ref|ZP_05845061.1| outer membrane assembly lipoprotein YfiO [Rhodobacter sp. SW2] gi|259020661|gb|EEW23979.1| outer membrane assembly lipoprotein YfiO [Rhodobacter sp. SW2] Length = 280 Score = 261 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 86/249 (34%), Positives = 140/249 (56%), Gaps = 5/249 (2%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAYEYFN 81 A + ++ V L G +++V LDS+T E+Y++ L+ + ++A YF Sbjct: 8 ARLLGTALIVATLAGCGGGGTKEVPLDSLT----AEEIYKRGEYALETRPKPTEAIRYFT 63 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + R +P+ A+++L+M AF + + KY++A S + Y+ YP ++ Y YL+ +SY Sbjct: 64 EVERLYPYTEWAKRALIMQAFTYHKSKKYEEARSAAQRYLDYYPGDEDAGYAKYLLALSY 123 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 I DV DQ T LQ + ++E Y ++ Y + A + +QLAAKE+EIGRYYL Sbjct: 124 YDQIDDVGRDQGVTFQALQALRAVIEEYPDTEYARSAILKFDMAFDQLAAKEMEIGRYYL 183 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 KRG Y AAI RF++V+ ++ H EA+ RLVEAY+AL L DEA+ +++ Y Sbjct: 184 KRGNYSAAINRFRVVVQDFQTTTHTAEALHRLVEAYLALGLTDEAQTAGAILGYNYQASP 243 Query: 262 WARYVETLV 270 + + L+ Sbjct: 244 FYQDSYKLL 252 >gi|331008768|gb|EGH88824.1| competence lipoprotein ComL [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 340 Score = 261 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 14/229 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 18 CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150 + Y G+ + A S E +I +P+ NVDY YY+ G++ Sbjct: 74 IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D A + +++ R+ NS Y A+ + RN LA+ E+ + Y L R YVAA Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYSLTRQAYVAAA 193 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|114331226|ref|YP_747448.1| TPR repeat-containing protein [Nitrosomonas eutropha C91] gi|114308240|gb|ABI59483.1| TPR repeat [Nitrosomonas eutropha C91] Length = 257 Score = 261 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 63/252 (25%), Positives = 108/252 (42%), Gaps = 18/252 (7%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 L S + V + Y +A L E N+S A + F +P+ A Sbjct: 3 LLAACGILSEKTVDNSQ----WSASKFYIEAKNELNEGNYSAAVKLFEALEARYPYGRFA 58 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----- 148 +++ L A+ Y + A + + +I YP N+DY YY+ G++ + + Sbjct: 59 QQAQLEIAYAYYKDQEQASAIAAADRFIQLYPHHHNIDYAYYIKGLASFNDDQGLLGYIT 118 Query: 149 ---------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 D +A++ + +V RY +S Y A + N LA E+ + RY Sbjct: 119 TKIIKQDLSERDAKASRESFEDFKLLVTRYPDSKYTPDALQRMAYLVNALARGEIHVARY 178 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y+KR Y+AA+ R Q VL Y EEA+ + AY L L+D + +I++ +P+ Sbjct: 179 YMKRKAYIAALRRAQFVLEEYPQTPATEEALYIMASAYNELGLIDLREDTEKVIKKNFPE 238 Query: 260 GYWARYVETLVK 271 + +LV+ Sbjct: 239 SAYLTDSGSLVE 250 >gi|260598976|ref|YP_003211547.1| outer membrane biogenesis protein BamD [Cronobacter turicensis z3032] gi|260218153|emb|CBA32978.1| UPF0169 lipoprotein yfiO [Cronobacter turicensis z3032] Length = 229 Score = 261 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 94/232 (40%), Gaps = 17/232 (7%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94 + G S++ D+ E+Y A L++ N+ A +PF ++ Sbjct: 1 MAGCS--GSKEEVPDNPP-----SEIYATAQQKLQDGNWKAAITQLEALDNRYPFGPYSQ 53 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV------ 148 + L + Y A + + +I P N+DYV Y+ G++ + Sbjct: 54 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVIYMRGLTNMALDDSALQGFFG 113 Query: 149 ----PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 D + + + S++V Y S Y A + +++L+ E+ + +YY KRG Sbjct: 114 VDRSDRDPQHARDAFRDFSKLVRGYPQSQYSTDATKRLVYLKDRLSKYELSVAQYYTKRG 173 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +VA + R +L +Y D + E + + AY L L +A +V +I Sbjct: 174 AWVAVVNRVDGMLRDYPDTQATHEGLGLMENAYRELQLNAQADKVAKIIAAN 225 >gi|88707053|ref|ZP_01104749.1| competence lipoprotein ComL family protein [Congregibacter litoralis KT71] gi|88698703|gb|EAQ95826.1| competence lipoprotein ComL family protein [Congregibacter litoralis KT71] Length = 303 Score = 261 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 57/235 (24%), Positives = 104/235 (44%), Gaps = 15/235 (6%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94 + G D+ DS ++++Y++A +L +NF + +PF A Sbjct: 27 IGGCAGNDEEDISADSG-----EQQIYDEAQRYLNARNFDLSIRALQALESRYPFGKYAE 81 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP----- 149 ++ L + Y A + A + +I +P+ NVDY YY+ G++ A +D Sbjct: 82 QAQLELIYAHYGAFSPEAAIEAADRFIRLHPQHPNVDYAYYMKGLATATASQDFLSRFTP 141 Query: 150 -----YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 D K S++V R+ +SPY A+ + RN LA E+ + YY +RG Sbjct: 142 TDKTLRDTSFAKEAFAEFSQLVTRFPDSPYAADAKSRMVYLRNLLARNEIHVANYYFRRG 201 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y+AA R + V+ N+ + +A + + Y+ L + D A+ + + +P Sbjct: 202 AYLAAANRGRYVVENFQRTPAVGDGLAVMAQGYLLLGMDDLAKNAIDTLALNFPD 256 >gi|34580817|ref|ZP_00142297.1| hypothetical protein [Rickettsia sibirica 246] gi|28262202|gb|EAA25706.1| unknown [Rickettsia sibirica 246] Length = 251 Score = 261 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 68/242 (28%), Positives = 125/242 (51%), Gaps = 6/242 (2%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 + L G + + + D + + +Y + + L+++ + A E F + P Sbjct: 12 VIGLVLGGCKNKKNSDDIVVPIA------TLYNEGITLLEKKKYKNAAEEFGRVLYQHPG 65 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL +SY +I DV Sbjct: 66 NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVN 125 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 +DQ T L ++ ++ N+ Y + + + + LA KE+ +GR+YLK+ +AA Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAA 185 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 I RF+ V+ NY H+ EA+ RL E+Y+ L L DEA++ S++ YP W Y L Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLAESYMMLGLPDEAKKYASVLGYNYPDSQWYSYAYRL 245 Query: 270 VK 271 V+ Sbjct: 246 VQ 247 >gi|229586426|ref|YP_002844927.1| DNA uptake lipoprotein [Rickettsia africae ESF-5] gi|228021476|gb|ACP53184.1| DNA uptake lipoprotein [Rickettsia africae ESF-5] Length = 251 Score = 261 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 68/242 (28%), Positives = 125/242 (51%), Gaps = 6/242 (2%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 + L G + + + D + + +Y + + L+++ + A E F + P Sbjct: 12 VIGLVLGGCKNKKNSDDIVVPIA------TLYNEGITLLEKKKYKNAAEEFGRVLYQHPG 65 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL +SY +I DV Sbjct: 66 NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVN 125 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 +DQ T L ++ ++ N+ Y + + + + LA KE+ +GR+YLK+ +AA Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMTVGRFYLKKKNPMAA 185 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 I RF+ V+ NY H+ EA+ RL E+Y+ L L DEA++ S++ YP W Y L Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLAESYMMLGLPDEAKKYASVLGYNYPDSQWYSYAYRL 245 Query: 270 VK 271 V+ Sbjct: 246 VQ 247 >gi|325129837|gb|EGC52644.1| competence lipoprotein comL [Neisseria meningitidis OX99.30304] Length = 256 Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 11/245 (4%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 L Q + D +T ++Y +A L N+++A + + FP + Sbjct: 1 LALSACATQGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVKLYEILESRFPTSRH 59 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---- 148 AR+S L +A+ Y + +A + E + +P+ N+DY YL G+ + Sbjct: 60 ARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALYLRGLVLFNEDQSFLNKL 119 Query: 149 ------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 D +A + Q + +V+R+ NS Y A + + L E+ + RYY+K Sbjct: 120 ASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMVKLVDALGGNEMSVARYYMK 179 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 RG Y+AA R Q ++ +Y + + EE++A L AY L A + +++ +P+ + Sbjct: 180 RGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAADTRRVLETNFPKSPF 239 Query: 263 ARYVE 267 + Sbjct: 240 LTHAW 244 >gi|317493977|ref|ZP_07952394.1| outer membrane assembly lipoprotein YfiO [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918304|gb|EFV39646.1| outer membrane assembly lipoprotein YfiO [Enterobacteriaceae bacterium 9_2_54FAA] Length = 245 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 15/228 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 SS+D D+ E+Y A L++ NF A +PF +++ L Sbjct: 19 GCSSSKDAVPDNPP-----SEIYATAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQVQL 73 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDV 148 + Y + A + + ++ P N+DYV Y+ G++ + I Sbjct: 74 DLIYAYYKSADLPMAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDDSALQGFFGIDRS 133 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D + + S++V+RY NS Y A + +++LA E+ + +YY KRG YVA Sbjct: 134 DRDPEHARQAFRDFSQLVQRYPNSQYSADATKRLVYLKDRLAKYELSVAQYYTKRGAYVA 193 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 + R + +L NY D + +A+ + AY + L +A +V +I E Sbjct: 194 VVNRVENMLRNYPDTQATRDALPLMENAYKQMNLTAQADKVAKIIAEN 241 >gi|292487318|ref|YP_003530190.1| hypothetical protein EAMY_0832 [Erwinia amylovora CFBP1430] gi|292900316|ref|YP_003539685.1| lipoprotein [Erwinia amylovora ATCC 49946] gi|291200164|emb|CBJ47290.1| putative lipoprotein [Erwinia amylovora ATCC 49946] gi|291552737|emb|CBA19782.1| UPF0169 lipoprotein PD_1756 precursor [Erwinia amylovora CFBP1430] Length = 243 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 15/228 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 SRD DS E+Y A L++ NF A +PF +++ L Sbjct: 19 GCSGSRDGVPDSPP-----SEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQL 73 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDV 148 + Y A + + ++ P N+DYV Y+ G++ + I Sbjct: 74 DLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRS 133 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D + + S+++ Y NS Y AR + + +LA E+ + +Y KRG YVA Sbjct: 134 DRDPTHARDAFKDFSQLLRGYPNSQYATDARKRLVFLKERLAKHELSVTEFYTKRGAYVA 193 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 + R + +L +Y D +A+ + AY L L +A V +I Sbjct: 194 VVNRVEQMLKDYPDTRATRKALPLMENAYRQLQLNAQAERVAKIIAAN 241 >gi|87199749|ref|YP_497006.1| DNA uptake lipoprotein [Novosphingobium aromaticivorans DSM 12444] gi|87135430|gb|ABD26172.1| DNA uptake lipoprotein [Novosphingobium aromaticivorans DSM 12444] Length = 268 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 73/222 (32%), Positives = 120/222 (54%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D R +Y A L + +A F++ R P++ AR++ LMSAF Y A Sbjct: 37 DVAYVARDVDTLYTAAKERLDRGDSKQAAALFDEVERQHPYSPWARRAQLMSAFSYYVAR 96 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 Y ++ + +++ +P +K+ Y YYL+ + Y + I DV DQ+ T+ L M+ +V R Sbjct: 97 DYSKSVQSAQRFLSIHPGNKDAPYAYYLIALCYYEQISDVTRDQKITQQALTAMNELVRR 156 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y N+ Y AR + + + LA KE+EIGR Y + G+++A+ RF+ V+ Y HA E Sbjct: 157 YPNTDYAADARLKIDLINDHLAGKEMEIGRMYQRSGKWLASSLRFRTVVDKYQTTSHAPE 216 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 A+ RLVE+Y++L L EA++ +++ YP W L+ Sbjct: 217 ALYRLVESYLSLGLPVEAQKAAAVLGSNYPGSKWYERSFELM 258 >gi|312958893|ref|ZP_07773412.1| competence lipoprotein [Pseudomonas fluorescens WH6] gi|311286663|gb|EFQ65225.1| competence lipoprotein [Pseudomonas fluorescens WH6] Length = 341 Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 16/244 (6%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + + + V + + E+Y+ A L +++ A Sbjct: 6 LLLIAILAMTAACSSTK------EVVDENLSEVELYQLAQKDLDNNSYTSATAKLKALES 59 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +PF A ++ L + Y + + A S E +I +P+ NVDY YY+ G++ Sbjct: 60 RYPFGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQD 119 Query: 146 RDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + D A + +++ RY NS Y A+ + RN LA+ E+ Sbjct: 120 VGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYEIH 179 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + YYL R YVAA R + V+ N+ + + +A + EAY L L + A + ++ Sbjct: 180 VAHYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELASTSLETLKL 239 Query: 256 RYPQ 259 YP Sbjct: 240 NYPD 243 >gi|330977499|gb|EGH77445.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 256 Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 14/229 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 18 CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150 + Y G+ + A S E +I +P+ NVDY YY+ G++ Sbjct: 74 IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YVAA Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYVAAA 193 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V+ N+ + + +A +VE+Y L L D A + +++ YP Sbjct: 194 NRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242 >gi|311104862|ref|YP_003977715.1| competence lipoprotein ComL [Achromobacter xylosoxidans A8] gi|310759551|gb|ADP15000.1| competence lipoprotein ComL [Achromobacter xylosoxidans A8] Length = 280 Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 58/249 (23%), Positives = 102/249 (40%), Gaps = 14/249 (5%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + AV + G +S+ T ++Y A + + +A E Sbjct: 21 VVIALFAVMVIAGCGSTNSKYDK----TTNWSAEQLYADAKAEMSSGGWKEARERLTAIE 76 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ- 143 +PF A+++LL A+V + G+ +QA + + + YP DY YL G+ Sbjct: 77 SRYPFGVYAQQALLELAYVNWKDGENEQALAAIDRFQQLYPNHPGTDYALYLKGLINFTP 136 Query: 144 ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 D + + + +++RY +S Y A V N +A EV Sbjct: 137 ASAFMSSITGQDPAERDPKGLRASYDAFNELIKRYPDSKYTVDAEKRVAWLVNTIAMNEV 196 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 + RYY +RG YVAA R Q V+ ++ A EEA+ +VE+Y L + + + + Sbjct: 197 HVARYYYERGAYVAAANRAQTVITDFEGAPATEEALYLMVESYDKLGMTELKNDSQRVYD 256 Query: 255 ERYPQGYWA 263 + +P + Sbjct: 257 KNFPNSEFK 265 >gi|308048516|ref|YP_003912082.1| outer membrane assembly lipoprotein YfiO [Ferrimonas balearica DSM 9799] gi|307630706|gb|ADN75008.1| outer membrane assembly lipoprotein YfiO [Ferrimonas balearica DSM 9799] Length = 256 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 97/254 (38%), Gaps = 14/254 (5%) Query: 19 LYKFALTIFFSIAVCF-LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + K ++ +++ F L R Y V + R +Y A ++ NF+KA Sbjct: 1 MRKITGSLLLALSSVFALSACSSTGDRSGY---VVEDRTPEALYADARQAMELGNFTKAS 57 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + +PF + L + Y A + + +I P ++DYVYY+ Sbjct: 58 QVLEALDSRYPFGPHKTQVQLDLIYAYYKLDDSASALANVDRFIRLNPTHPDIDYVYYMR 117 Query: 138 GMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+ Q I D + +V+ Y NS Y A+ + + +N Sbjct: 118 GLVNMQADSYLFHDMLGIDRTDRDPSNAVAAFRDFETLVKSYPNSRYAPDAQRRMIMLKN 177 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 +LA +++ YY+ +V A R Q VL Y E A+ ++ +Y L Sbjct: 178 RLAEFSLKVAEYYVTMEAWVGAANRAQQVLETYPGTPATERALEIMITSYDELGQEAMRD 237 Query: 248 EVVSLIQERYPQGY 261 VS+++ +P Sbjct: 238 HSVSVLKATFPDNR 251 >gi|238650459|ref|YP_002916311.1| ComL family lipoprotein [Rickettsia peacockii str. Rustic] gi|238624557|gb|ACR47263.1| ComL family lipoprotein [Rickettsia peacockii str. Rustic] Length = 251 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 68/242 (28%), Positives = 125/242 (51%), Gaps = 6/242 (2%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 + L G + + + D + + +Y + + L+++ + A E F + P Sbjct: 12 VIGLVLGGCKNKKTSDDIVVPIA------TLYNEGITLLEKKKYKNAAEEFGRVLYQHPG 65 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL +SY +I DV Sbjct: 66 NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVN 125 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 +DQ T L ++ ++ N+ Y + + + + LA KE+ +GR+YLK+ +AA Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAA 185 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 I RF+ V+ NY H+ EA+ RL E+Y+ L L DEA++ S++ YP W Y L Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLAESYMILGLPDEAKKYASVLGYNYPDSQWYSYAYRL 245 Query: 270 VK 271 V+ Sbjct: 246 VQ 247 >gi|254511506|ref|ZP_05123573.1| tetratricopeptide TPR_2 repeat protein [Rhodobacteraceae bacterium KLH11] gi|221535217|gb|EEE38205.1| tetratricopeptide TPR_2 repeat protein [Rhodobacteraceae bacterium KLH11] Length = 286 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 70/250 (28%), Positives = 126/250 (50%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + A + + + S + + + +++ + L + A YF Sbjct: 9 RIAGALLLATVLTACGDGGLFSKKGADRNQNLEGYTPEQIFTRGEYELSQDRSDDAAWYF 68 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 ++ R +P++ A+++L+M AF ++ Y ++ + + YI YP ++ Y YL+ +S Sbjct: 69 SEVERLYPYSDWAKRALIMQAFSYHNDKNYAESRAAAQRYIDFYPTDEDAAYAQYLLALS 128 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 Y I +V DQ T LQ + ++E Y +S Y A + + LA KE+EIGRYY Sbjct: 129 YYDQIDEVGRDQGLTFQALQALRTVIEVYPDSEYATSAVLKFDLAFDHLAGKEMEIGRYY 188 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ + AAI RF++V+ ++ H EA+ RL+EAY+AL L+DEA+ +++ Y Sbjct: 189 LRQDHFTAAINRFRVVVEDFQTTSHTAEALYRLIEAYLALGLVDEAQTAGAILGYNYQSS 248 Query: 261 YWARYVETLV 270 W TL+ Sbjct: 249 EWYDAGYTLL 258 >gi|296116445|ref|ZP_06835059.1| hypothetical protein GXY_11614 [Gluconacetobacter hansenii ATCC 23769] gi|295977038|gb|EFG83802.1| hypothetical protein GXY_11614 [Gluconacetobacter hansenii ATCC 23769] Length = 292 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 64/258 (24%), Positives = 122/258 (47%), Gaps = 3/258 (1%) Query: 14 AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73 +L A + A+ FL S ++ V +Y V L+ + Sbjct: 10 LLLRRLGGIAPRLLGLPALAFLAACNGNS---AIMEHAPRVGSAETLYNHGVDALRTNRY 66 Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A F+ R++P++ + LM + Y KY +A + ++ +P S + Y Sbjct: 67 VLATIQFDVLQRNYPYSQYTANAQLMEGYSDYLQSKYPEAVQQLDRFLELHPTSSDAAYA 126 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 +YL + Y + + DV DQ+ T + + ++ R+ +PY + A+ + + R+ LA KE Sbjct: 127 FYLRALCYYEQVADVQRDQQGTIESMDALEEVITRFPQTPYARDAQLKIDLCRDHLAGKE 186 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +GR+Y ++ Y AA+ R+Q V+ ++ H EA+ RLVE Y+ L L+++AR+ +++ Sbjct: 187 MLVGRFYQEQRNYQAAVNRYQRVVQDFQTTNHVPEALERLVEVYLDLGLLEQARKTGAVL 246 Query: 254 QERYPQGYWARYVETLVK 271 YP W ++ Sbjct: 247 AYNYPDSKWYHDAYDHLR 264 >gi|260426152|ref|ZP_05780131.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45] gi|260420644|gb|EEX13895.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45] Length = 286 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 74/248 (29%), Positives = 128/248 (51%), Gaps = 1/248 (0%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 L I + + L G Q ++ + +++E+ L ++ +A YF + Sbjct: 9 LVIGLAFSAIILAGCTAQERDGYAKGNIPLETFSAEQIFERGEYELDRKDGERAAYYFGE 68 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 R +P++ ++++L+M A+ + Y+ + S + YI YP + Y YL+ +SY Sbjct: 69 VERLYPYSDWSKRALIMQAYAYHLEKDYENSRSSAQRYIDFYPTDDDAAYAQYLLALSYY 128 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 I +V DQ T LQ + ++ERY +S Y + + + + LAAKE+EIGRYYL+ Sbjct: 129 DQIEEVGRDQGLTFQALQALRTVIERYPDSEYARSSILKFDLAFDHLAAKEMEIGRYYLR 188 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 R Y AAI RF+ V+ ++ H EA+ RLVEAY++L L++EA+ +++ Y W Sbjct: 189 RQHYGAAINRFRSVVEDFQTTTHTPEALHRLVEAYLSLGLVNEAQTAGAILGYNYQGTVW 248 Query: 263 ARYVETLV 270 L+ Sbjct: 249 YADTYALL 256 >gi|323497825|ref|ZP_08102839.1| putative lipoprotein [Vibrio sinaloensis DSM 21326] gi|323317172|gb|EGA70169.1| putative lipoprotein [Vibrio sinaloensis DSM 21326] Length = 241 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 102/242 (42%), Gaps = 17/242 (7%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 T+ +A+ LVG SS ++ D E+Y +A + L+ N+ A Sbjct: 5 TLSGLLALSVLVGCS--SSEEIVPDVPP-----SELYSEAQISLQSGNWLSAISQLEALD 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +PF + + L + Y + E + P + +D+V Y+ G+++ Sbjct: 58 SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKLDWVLYMRGLTHMAQ 117 Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 R+ D K R++ERY SPY + A+ + +N+LA ++ Sbjct: 118 DRNFMHDLFNVDRSDRDPEPVKKAFADFKRLLERYPTSPYAEDAQKRMLALKNRLAEYDL 177 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +YL+R ++AAI R Q + Y D A E++ +EAY AL L D + LI+ Sbjct: 178 ATADFYLRREAWIAAINRTQELQKTYPDTVAARESLQIQLEAYKALGLEDAIKRTQQLIE 237 Query: 255 ER 256 Sbjct: 238 LN 239 >gi|311278475|ref|YP_003940706.1| outer membrane assembly lipoprotein YfiO [Enterobacter cloacae SCF1] gi|308747670|gb|ADO47422.1| outer membrane assembly lipoprotein YfiO [Enterobacter cloacae SCF1] Length = 245 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 45/228 (19%), Positives = 93/228 (40%), Gaps = 15/228 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 S++ D+ E+Y A L++ N+ +A +PF +++ L Sbjct: 19 GCSGSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQL 73 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148 + Y A + + ++ P N+DYV Y+ G++ + Sbjct: 74 DLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTNMALDDSALQGFFGVDRS 133 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D + + +++V Y S Y A + +++LA E+ + YY RG +VA Sbjct: 134 DRDPQHARDAFNDFTKLVRGYPQSQYATDAYKRMVFLKDRLAKYELSVVDYYTDRGAWVA 193 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 + R + +L +Y D + +A+ ++ AY + + +A +V +I Sbjct: 194 VVNRVEGMLRDYPDTQATRDALPKMENAYRQMQMNAQADKVAKIIAAN 241 >gi|86137669|ref|ZP_01056246.1| competence lipoprotein ComL, putative [Roseobacter sp. MED193] gi|85826004|gb|EAQ46202.1| competence lipoprotein ComL, putative [Roseobacter sp. MED193] Length = 282 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 76/250 (30%), Positives = 128/250 (51%), Gaps = 4/250 (1%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 KF A+ G + + V L+S T ++++E+ L A YF Sbjct: 9 KFVSAALLMAALSGCGGDGGAADQTVPLESYT----PQQIFERGEFELARSRTKDAAFYF 64 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 ++ R +P++ A+++L+M AF + + Y+ + + +I YP ++ Y YL+ +S Sbjct: 65 SEIERLYPYSEFAKQALIMQAFANHQSKDYEASRGAAQRFIDFYPTDEDAAYAQYLLALS 124 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 Y I +V DQ T LQ + ++E Y +S Y A + + LA KE+EIGRYY Sbjct: 125 YYDQIDEVGRDQGLTFQALQSLRTVIEVYPDSEYATSAILKFDLAFDHLAGKEMEIGRYY 184 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L+RG Y +AI RF++V+ ++ H EA+ RLVEAY++L L +EA+ +++ Y Sbjct: 185 LRRGHYTSAISRFRVVVEDFQTTSHTAEALHRLVEAYLSLGLTEEAQTAGAILGHNYQST 244 Query: 261 YWARYVETLV 270 W L+ Sbjct: 245 DWYEDSYKLL 254 >gi|239501206|ref|ZP_04660516.1| DNA uptake lipoprotein [Acinetobacter baumannii AB900] Length = 385 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 14/253 (5%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y++ AL++ + A VG S+ +D+ ++ ++KA L + A Sbjct: 6 YKITMLALSLGVASAF---VGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDA 61 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ Sbjct: 62 TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYV 121 Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 G+S +M ++ D K+ Q ++ R+ +S Y A + Sbjct: 122 RGVSNMEMNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIG 181 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +LA E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L + Sbjct: 182 QELAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATS 241 Query: 247 REVVSLIQERYPQ 259 ++ + +++ YP Sbjct: 242 QQYIEVLKLNYPS 254 >gi|299771332|ref|YP_003733358.1| DNA uptake lipoprotein [Acinetobacter sp. DR1] gi|298701420|gb|ADI91985.1| DNA uptake lipoprotein [Acinetobacter sp. DR1] Length = 387 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 108/253 (42%), Gaps = 14/253 (5%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y++ AL++ + A VG S+ +DS ++ +EKA L + A Sbjct: 6 YKITMLALSLGVASAF---VGCSSNPSKKEVVDSGPQ-SSEQAYFEKAQKSLDRGQYLDA 61 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ Sbjct: 62 TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYV 121 Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 +S + ++ D K+ Q ++ R+ +S Y A + Sbjct: 122 RAVSNMEQNYDSLMRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIG 181 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +LA E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L + Sbjct: 182 QELAENEMTAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYNQLGDKATS 241 Query: 247 REVVSLIQERYPQ 259 ++ + +++ YP Sbjct: 242 QQYIEVLKLNYPN 254 >gi|15892153|ref|NP_359867.1| hypothetical protein RC0230 [Rickettsia conorii str. Malish 7] gi|15619283|gb|AAL02768.1| unknown [Rickettsia conorii str. Malish 7] Length = 251 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 68/242 (28%), Positives = 125/242 (51%), Gaps = 6/242 (2%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 + L G + + + D + + +Y + + L+++ + A E F + P Sbjct: 12 VIGLVLGGCKNKKNSDDIVVPIA------TLYNEGITLLEKKKYKNAAEEFGRVLYQHPG 65 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL +SY +I DV Sbjct: 66 NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVN 125 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 +DQ T L ++ ++ N+ Y + + + + LA KE+ +GR+YLK+ +AA Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAA 185 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 I RF+ V+ NY H+ EA+ RL E+Y+ L L DEA++ S++ YP W Y L Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLAESYMMLGLSDEAKKYASVLGYNYPDSQWYSYAYRL 245 Query: 270 VK 271 V+ Sbjct: 246 VQ 247 >gi|260434236|ref|ZP_05788207.1| tetratricopeptide TPR_2 repeat protein [Silicibacter lacuscaerulensis ITI-1157] gi|260418064|gb|EEX11323.1| tetratricopeptide TPR_2 repeat protein [Silicibacter lacuscaerulensis ITI-1157] Length = 287 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 73/248 (29%), Positives = 127/248 (51%), Gaps = 1/248 (0%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A+ + ++ C G ++ + +++ + L + A YF++ Sbjct: 13 AILLALTLTACGNAG-GLFGNKGADRSQNLEGYTPEQIFTRGEFELSQNRPEDAAWYFSE 71 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 R +P++ A++SL+M AF +S Y+++ + + YI YP ++ Y YL+ +SY Sbjct: 72 VERLYPYSDWAKRSLIMQAFAFHSDKNYEESRAAAQRYIDFYPTDEDAAYAQYLLALSYY 131 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 I +V DQ T LQ + ++E Y +S Y A + + LA KE+EIGRYYL+ Sbjct: 132 DQIDEVGRDQGLTFQALQALRTVIEVYPDSEYATSAVLKFDLAFDHLAGKEMEIGRYYLR 191 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + Y AAI RF++V+ ++ H EA+ RL+EAY+AL L+DEA+ +++ Y W Sbjct: 192 QDHYAAAINRFRVVVEDFQTTTHTAEALYRLIEAYLALGLVDEAQSAGAILGYNYQSSEW 251 Query: 263 ARYVETLV 270 L+ Sbjct: 252 YDAAYKLL 259 >gi|157828109|ref|YP_001494351.1| hypothetical protein A1G_01315 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932811|ref|YP_001649600.1| ComL family lipoprotein [Rickettsia rickettsii str. Iowa] gi|157800590|gb|ABV75843.1| hypothetical protein A1G_01315 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165907898|gb|ABY72194.1| lipoprotein, ComL family [Rickettsia rickettsii str. Iowa] Length = 251 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 69/242 (28%), Positives = 126/242 (52%), Gaps = 6/242 (2%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 + L G + + + D + + +Y + + L+++ + A E F + P Sbjct: 12 VIGLVLGGCKNKKTSDDIVVPIA------TLYNEGITLLEKKKYKNAAEEFGRVLYQHPG 65 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + ++ LM A+ + A +Y++A + + +IT +P + ++ Y YYL +SY +I DV Sbjct: 66 NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFITLHPANVDIAYAYYLKALSYYMLISDVN 125 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 +DQ T L ++ ++ N+ Y + + + + LA KE+ +GR+YLK+ +AA Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAA 185 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 I RF+ V+ NY H+ EA+ RL E+Y+ L L DEA++ S++ YP W Y L Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLAESYMILGLPDEAKKYASVLGYNYPDSQWYSYAYRL 245 Query: 270 VK 271 V+ Sbjct: 246 VQ 247 >gi|262373261|ref|ZP_06066540.1| competence lipoprotein comL [Acinetobacter junii SH205] gi|262313286|gb|EEY94371.1| competence lipoprotein comL [Acinetobacter junii SH205] Length = 365 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 108/253 (42%), Gaps = 14/253 (5%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y++ AL++ + A VG S+ +D ++ +EKA L ++ A Sbjct: 6 YKITMLALSLGVASAF---VGCSSNPSKKEVVDKGPQ-SSEQVYFEKAQKSLDRNQYTDA 61 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + +P +++ L + ++ Y+ +L E +I P+ NVDY YY+ Sbjct: 62 VKSLEALDTYYPTGRYTQQAQLELLYAKFKQKDYEGTIALAERFIRLNPQHPNVDYAYYV 121 Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 G++ +M ++ D K+ Q ++ R+ +S Y A + Sbjct: 122 RGVANMEMNYDSLIRYTSLQQSHRDVSYVKVAYQNFVDLIRRFPSSKYSVDAAQRMKFIG 181 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +LA E+ R+ ++R ++AA R Q V+ +Y EA+A L +Y L A Sbjct: 182 QELAESEMNAARFNIQRKAWLAAAERAQWVIEHYPQTPQTPEALATLAYSYQKLGDNSTA 241 Query: 247 REVVSLIQERYPQ 259 ++ + +++ YP Sbjct: 242 QQYIEILKLNYPN 254 >gi|89055239|ref|YP_510690.1| competence lipoprotein ComL, putative [Jannaschia sp. CCS1] gi|88864788|gb|ABD55665.1| competence lipoprotein ComL putative [Jannaschia sp. CCS1] Length = 302 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 114/218 (52%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + +Y++A L+ A E F + R P++ A ++L+M+AF + G Y Sbjct: 55 PLEQLDAETIYQQAEFELERGRADNAAELFIEVERLHPYSAWAERALIMAAFAYHEDGDY 114 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + A + Y+ YP +++ Y YL+ +SY I V DQ T LQ + ++ERY Sbjct: 115 EAARVAAQRYLDFYPGNEDAAYAQYLLALSYYDQIDQVGRDQGVTFQALQALRVVIERYP 174 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 +S YV+ A + + LA KE+E+GRYYL+R Y +AI RF++V+ + H EA+ Sbjct: 175 DSDYVQDAILRFDLAFDHLAGKEMEVGRYYLRREHYTSAINRFRVVVEEFQTTSHTPEAL 234 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 RLVEAY+AL L DEA+ +++ + + Sbjct: 235 LRLVEAYLALGLTDEAQTAGAILGYNFQSSPFYDDAFR 272 >gi|91794215|ref|YP_563866.1| putative lipoprotein [Shewanella denitrificans OS217] gi|91716217|gb|ABE56143.1| putative lipoprotein [Shewanella denitrificans OS217] Length = 253 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 98/253 (38%), Gaps = 14/253 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +YKFA + + + + + +Y +A ++ N+SKA Sbjct: 1 MYKFAKGAALVMLSLAITACSSSPED----ADIANKKSPEALYAQARTSMELGNYSKAAR 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF + L F Y + + ++ P N+DYV+Y+ G Sbjct: 57 SLEALDSRYPFGPHKTQVQLDLIFAYYKMDDAASGLANIDRFLRLNPTHPNIDYVHYMRG 116 Query: 139 MSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ Q I D + + + ++++ Y NS Y A+ + +N+ Sbjct: 117 LTNMQADNYLFHDMLDIDRTDRDTKNAQDAFKDFDKLIKSYPNSKYAADAQQRMQYLKNR 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA V + YY+K + AA R Q V+ + + E A+ + EAY L + Sbjct: 177 LANYSVIVAEYYIKMNAWSAAAVRAQTVMEKFPNTPSTERALEIMAEAYQELGQTQLKQN 236 Query: 249 VVSLIQERYPQGY 261 V+++++ +P Sbjct: 237 VLTVLKANFPSNE 249 >gi|237809511|ref|YP_002893951.1| outer membrane assembly lipoprotein YfiO [Tolumonas auensis DSM 9187] gi|237501772|gb|ACQ94365.1| outer membrane assembly lipoprotein YfiO [Tolumonas auensis DSM 9187] Length = 253 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 112/257 (43%), Gaps = 17/257 (6%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 ++ +F + S+++ L G S + D +V +Y++A L ++ + Sbjct: 1 MQKVVRFFPVMLLSLSL--LAGCSSSSDKPKVPDEPLEV-----LYKQAQSKLHNGDYER 53 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + +PF A + L + Y QA + + ++ P K+VDYVYY Sbjct: 54 AVDILEALDSRYPFGPYASQVQLQLIYAYYKKEDTAQAIANIDRFLRLNPTHKDVDYVYY 113 Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G++ Q I D + + + +++ Y +S Y AR Sbjct: 114 MRGLANMQEDYNFFHDKFGIDRSDRDPQYARQAFKDFQLVLKNYPDSLYASDARARAVYL 173 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 +N+LA ++ I +Y++R +V+A R + ++ NY D E + A+ +V+AY + L D Sbjct: 174 KNRLAKFDLAIADFYMRREAWVSAANRAKYLIENYPDTEMTQPALEIMVQAYEKMDLTDL 233 Query: 246 AREVVSLIQERYPQGYW 262 A+ ++ YP + Sbjct: 234 AKHARQMLSTNYPDSEY 250 >gi|45403|emb|CAA78141.1| putative protein of no known function [Pseudomonas aeruginosa PAO1] Length = 341 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 10/229 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 ++V + + ++Y++A L ++++ A +PF A ++ L + Y Sbjct: 23 ETVDENLSESQLYQQAQDDLNNKSYNSAVTKLKALESRYPFGRYAEQAQLELIYANYKNM 82 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158 + + A + E +I +P+ NVDY YYL G+S R + D A + Sbjct: 83 EPEAARAAAERFIRLHPQHPNVDYAYYLKGLSSFDQDRGLLARFLPLDMTKRDPGAARDS 142 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 +++ R NS Y A+ + RN LAA EV +G YYLKR YVAA R + V+ Sbjct: 143 FNEFAQLTSRLPNSRYAPDAKARMVYLRNLLAAYEVHVGHYYLKRQAYVAAANRGRYVVE 202 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 N+ + + +A +VEAY L L D A + ++ YP + E Sbjct: 203 NFQETPAVGDGLAIMVEAYRRLGLDDLASTSLETLKLNYPDNASLKDGE 251 >gi|217979600|ref|YP_002363747.1| outer membrane assembly lipoprotein YfiO [Methylocella silvestris BL2] gi|217504976|gb|ACK52385.1| outer membrane assembly lipoprotein YfiO [Methylocella silvestris BL2] Length = 288 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 81/229 (35%), Positives = 129/229 (56%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S D Y + ++Y + + LK +++ A + F + +P++ RK L+M+ F Sbjct: 36 SGDKYKPEILKDTPAEDLYNQGLARLKVRDYPAAAKSFAALDKQYPYSQWQRKGLIMTTF 95 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 QY AG Y+ A + YI +P++ +VDY YYL MSY I D+ DQ + Sbjct: 96 AQYQAGSYEDAIGSAKRYIGLFPQAADVDYAYYLEAMSYYNQIPDISRDQDRSAKAADLF 155 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 ++I+E+Y S YV +R+ + V R+QLA KE+ +GR+YL + YVAA+ RF+ VLA Y Sbjct: 156 AQIIEKYPKSEYVDDSRYKLQVTRDQLAGKEMMVGRFYLNQRNYVAAVGRFREVLAKYQT 215 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 HAEEA+ RL EAY+AL + EA+ +++ +P W + L++ Sbjct: 216 TRHAEEALMRLTEAYLALGVPQEAQTAAAILGHNFPDSVWYKDAYALLR 264 >gi|118590884|ref|ZP_01548284.1| putative lipoprotein [Stappia aggregata IAM 12614] gi|118436406|gb|EAV43047.1| putative lipoprotein [Stappia aggregata IAM 12614] Length = 270 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 62/230 (26%), Positives = 123/230 (53%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 +D + + ++ + + + + + F + + +P++ ++KSL+ Sbjct: 19 CGGKDDLDELALNDTPPEVLFNEGLSLRAQGKLRDSAQKFEELDKLYPYSEYSKKSLVNL 78 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 AF+ YS GKY + + + ++T YP ++ Y+ YL G +Y + + D+ DQ T+ Sbjct: 79 AFLNYSRGKYTETVTAAKRFVTLYPGDEDSAYMLYLAGQAYFRQMPDITRDQAVTRKAAG 138 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 + +++R+ S YV A + + +QL KE+++GR+YL++ Y+A I RF+ V+ +Y Sbjct: 139 AFNELIQRFPESEYVPDAESKLRIVHDQLGGKEMQVGRFYLQKRNYIAGINRFKTVVVDY 198 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 H EEA+ RL EAY AL +++EA+ +++ YP W + +L+ Sbjct: 199 QTTRHVEEALFRLTEAYYALGVVNEAQTAAAVLGHNYPDSQWYKDAYSLL 248 >gi|312171424|emb|CBX79683.1| UPF0169 lipoprotein PD_1756 precursor [Erwinia amylovora ATCC BAA-2158] Length = 243 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 91/228 (39%), Gaps = 15/228 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 SRD DS E+Y A L++ NF A +PF +++ L Sbjct: 19 GCSGSRDGVPDSPP-----SEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQL 73 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDV 148 + Y A + + ++ P N+DYV Y+ G++ + I Sbjct: 74 DLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRS 133 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D + + S+++ Y NS Y AR + + +LA E+ + +Y RG YVA Sbjct: 134 DRDPTHARDAFKDFSQLLRGYPNSQYATDARKRLVFLKERLAKHELSVTEFYTNRGAYVA 193 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 + R + +L +Y D +A+ + AY L L +A V +I Sbjct: 194 VVNRVEQMLKDYPDTRATRKALPLMENAYRQLQLNAQAERVAKIIAAN 241 >gi|114321698|ref|YP_743381.1| putative lipoprotein [Alkalilimnicola ehrlichii MLHE-1] gi|114228092|gb|ABI57891.1| putative lipoprotein [Alkalilimnicola ehrlichii MLHE-1] Length = 254 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 17/235 (7%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G + + E+Y++A L+ N++ A E + FPF A + Sbjct: 20 GGCSSNG-----PERQEEQATAEELYQQARRQLENGNYTMAVETLERLQGRFPFGPFATQ 74 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-----------AQM 144 + L + Y AG+ + + + ++ YP NV Y Y+ G++ + Sbjct: 75 AQLDIIYAYYQAGELESTIAAADRFMRLYPRDPNVAYARYMRGLANAGVGDEFFTRVFNL 134 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 R + D + + +++R+ +S YV AR + R+ LA E+ + R+YL+R Sbjct: 135 DRSL-RDPQPLRRAFVDFRELIQRHPDSEYVDDARERMQEIRDLLARHEIYVARFYLRRD 193 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 VAA+ R + VL Y E+A+ LVEAY L L D ++V +I E +P Sbjct: 194 APVAAVGRARTVLQEYQGTGAVEDALEVLVEAYGMLELADLQQDVRRVIGENFPG 248 >gi|330501970|ref|YP_004378839.1| DNA uptake lipoprotein-like protein [Pseudomonas mendocina NK-01] gi|328916256|gb|AEB57087.1| DNA uptake lipoprotein-like protein [Pseudomonas mendocina NK-01] Length = 330 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 10/221 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 V + + E+Y++A L +++++A +PF A ++ L + Y Sbjct: 23 PEVDENLSEVELYQQAQADLDNRSYTQAIAKLKALESRYPFGRYAEQAQLELIYAYYKNA 82 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158 + + A S E +I +P+ NVDY YYL G++ R + D A + Sbjct: 83 EPEAAKSSAERFIRLHPQHANVDYAYYLKGLASFDQDRGLLARFLPLDMTKRDPGAARDS 142 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 +++ RY S Y A+ + RN LAA E+ +G YYL R YVAA R + V+ Sbjct: 143 YNEFAQLTSRYPTSRYAPDAKQRMIYLRNLLAAYEIHVGHYYLTRQAYVAAANRGRYVVE 202 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 N+ + + +A + EAY L+L D A + ++ YP Sbjct: 203 NFQETPSVGDGLAIMTEAYQRLSLDDLAATSLETLKLNYPD 243 >gi|184157113|ref|YP_001845452.1| DNA uptake lipoprotein [Acinetobacter baumannii ACICU] gi|183208707|gb|ACC56105.1| DNA uptake lipoprotein [Acinetobacter baumannii ACICU] Length = 385 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 14/253 (5%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y++ AL++ + A VG S+ +D+ ++ ++KA L + A Sbjct: 6 YKITMLALSLGVASAF---VGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDA 61 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ Sbjct: 62 TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYV 121 Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 G+S +M ++ D K+ Q ++ R+ +S Y A + Sbjct: 122 RGVSNMEMNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIG 181 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +LA E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L + Sbjct: 182 QELAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATS 241 Query: 247 REVVSLIQERYPQ 259 ++ + +++ YP Sbjct: 242 QQYIEVLKLNYPS 254 >gi|146306003|ref|YP_001186468.1| DNA uptake lipoprotein-like protein [Pseudomonas mendocina ymp] gi|145574204|gb|ABP83736.1| DNA uptake lipoprotein-like protein [Pseudomonas mendocina ymp] Length = 330 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 10/221 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 V + + E+Y +A L +++++A +PF A ++ L + Y Sbjct: 23 PEVDENLSEVELYRQAQADLDNRSYTQAIAKLKALESRYPFGRYAEQAQLELIYAYYKNV 82 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158 + + A S E +I +P+ NVDY YYL G++ R + D A + Sbjct: 83 EPEAAKSSAERFIRLHPQHANVDYAYYLKGLASFDQDRGLLARFLPLDMTKRDPGAARDS 142 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 +++ RY S Y A+ + RN LAA EV +G YYLKR YVAA R + V+ Sbjct: 143 YNEFAQLTSRYPTSRYAPDAKQRMIYLRNLLAAYEVHVGHYYLKRQAYVAAANRGRYVVE 202 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 N+ + + +A + EAY LAL D A + ++ YP Sbjct: 203 NFQETPAVGDGLAIMTEAYQRLALNDLAATSLETLKLNYPD 243 >gi|58038651|ref|YP_190615.1| lipoprotein [Gluconobacter oxydans 621H] gi|58001065|gb|AAW59959.1| Hypothetical lipoprotein [Gluconobacter oxydans 621H] Length = 299 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 66/253 (26%), Positives = 123/253 (48%), Gaps = 6/253 (2%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 L A++ F ++ C L + + ++ +Y + L ++ A Sbjct: 20 LRAAAVSGFLLLSGCSLFSHQHEK------PAIPKTADAETLYNYGIDALHTGHYELAGG 73 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F +++P++G + LM + Y G+Y + E Y+ +P S + Y +YL Sbjct: 74 EFELLQQNYPYSGFTGNAELMEGYAYYLQGEYALSVQQLERYLQLHPTSPDAAYAFYLRA 133 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 + Y + I +V DQ+ T L + ++ R+ + Y + A+ + + R+ LA KE+ +GR Sbjct: 134 LCYYEQIANVERDQQGTVEALDALEEVITRFPQTSYARDAQLKIDLCRDHLAGKEMLVGR 193 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 +Y ++ Y AA+ R+Q V+ +Y H EA+ RLVE Y+AL L D+A + +++ YP Sbjct: 194 WYQQQRNYEAAMTRYQRVVQDYQTTNHVAEALERLVEVYLALGLKDQAHQTAAVLGYNYP 253 Query: 259 QGYWARYVETLVK 271 W RY ++ Sbjct: 254 DSQWYRYAYNDLR 266 Score = 37.0 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 45/150 (30%), Gaps = 25/150 (16%) Query: 60 VYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS--------------AFVQ 104 YE+ A + +Q +A + + FP AR + L Sbjct: 136 YYEQIANVERDQQGTVEALDALEEVITRFPQTSYARDAQLKIDLCRDHLAGKEMLVGRWY 195 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y+ A + + + Y + +V + + +V Q + Sbjct: 196 QQQRNYEAAMTRYQRVVQDYQTTNHVAEAL--------ERLVEVYLALGLKDQAHQTAAV 247 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 + Y +S + + A + N L ++ Sbjct: 248 LGYNYPDSQWYRYAYNDLRE--NHLLKSDL 275 >gi|126726631|ref|ZP_01742471.1| Putative ComL lipoprotein [Rhodobacterales bacterium HTCC2150] gi|126703960|gb|EBA03053.1| Putative ComL lipoprotein [Rhodobacterales bacterium HTCC2150] Length = 278 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 75/251 (29%), Positives = 131/251 (52%), Gaps = 4/251 (1%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 K + + + + R +++ D++ R ++ A L+E+ KA + Sbjct: 4 KKTLHIVGGVLMLASVTACSRLGNKEPVYDNLP----ARSIFTLAEQKLEEKEPEKAAKI 59 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F + R +P++ +A+++L+M AF + Y+ + + +I YP ++ Y YL+ + Sbjct: 60 FGEIERLYPYSDLAKRALIMQAFSYHKDKDYENSRIAAQRFIDFYPADEDAAYAEYLLAL 119 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 SY I +V DQ T LQ + ++ERY ++ Y K A + + LAAKE+EIGRY Sbjct: 120 SYYDQIDEVGRDQGLTFQALQGLRTVIERYPDTEYAKSAILKFDLAFDHLAAKEMEIGRY 179 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YLKR Y +AI RF++V+ ++ H EA+ RL+EAY+AL L DEA+ +++ + Sbjct: 180 YLKRDHYTSAINRFRVVVEDFQTTAHTAEALYRLIEAYLALGLADEAQTAGAILGHNFQS 239 Query: 260 GYWARYVETLV 270 W L+ Sbjct: 240 TEWYDDGFRLL 250 >gi|126173260|ref|YP_001049409.1| putative lipoprotein [Shewanella baltica OS155] gi|152999619|ref|YP_001365300.1| putative lipoprotein [Shewanella baltica OS185] gi|160874238|ref|YP_001553554.1| putative lipoprotein [Shewanella baltica OS195] gi|217974429|ref|YP_002359180.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS223] gi|304410383|ref|ZP_07392001.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS183] gi|307304475|ref|ZP_07584225.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica BA175] gi|125996465|gb|ABN60540.1| putative lipoprotein [Shewanella baltica OS155] gi|151364237|gb|ABS07237.1| putative lipoprotein [Shewanella baltica OS185] gi|160859760|gb|ABX48294.1| putative lipoprotein [Shewanella baltica OS195] gi|217499564|gb|ACK47757.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS223] gi|304350867|gb|EFM15267.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS183] gi|306911877|gb|EFN42301.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica BA175] gi|315266472|gb|ADT93325.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS678] Length = 253 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 97/253 (38%), Gaps = 14/253 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +YKF+ + + L + + +Y +A ++ N+SKA Sbjct: 1 MYKFSKGVTLVLFSLALSACSSSPDDN----DIAAKTSPDVLYTQARTSMELGNYSKAVR 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 FPF + L + Y + + +I P ++DYV+Y+ G Sbjct: 57 SLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDRFIRLNPTHPDIDYVFYMRG 116 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + Q I D + + + R+++ Y NS Y A+ + +N+ Sbjct: 117 LVNMQADNYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTYPNSKYAADAQKRMLALKNR 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA +++ YYLK + AA R Q V+ Y E A+ ++EAY L + Sbjct: 177 LARYSIQVAEYYLKMNAWSAAAIRAQSVMETYPGTPSNERALEIMIEAYGELGQSKLKQN 236 Query: 249 VVSLIQERYPQGY 261 V+ ++Q YP Sbjct: 237 VLMVMQANYPNNE 249 >gi|330994414|ref|ZP_08318340.1| UPF0169 lipoprotein [Gluconacetobacter sp. SXCC-1] gi|330995012|ref|ZP_08318932.1| UPF0169 lipoprotein [Gluconacetobacter sp. SXCC-1] gi|329757925|gb|EGG74449.1| UPF0169 lipoprotein [Gluconacetobacter sp. SXCC-1] gi|329758540|gb|EGG75058.1| UPF0169 lipoprotein [Gluconacetobacter sp. SXCC-1] Length = 294 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 118/247 (47%), Gaps = 3/247 (1%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + +A + SS + V +Y V L+ + + F+ Sbjct: 23 LVLVPLAGLLAACGQSASS---INERAPRVGSAETLYNNGVDALRSDRYLLSVNQFDTLQ 79 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 R++P++ + LM + Y KY +A + ++ +P S + Y +YL + Y + Sbjct: 80 RNYPYSQYTANAQLMEGYANYLLNKYPEAVQQLDRFLELHPTSADAAYAFYLRALCYYEQ 139 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + DV DQ+ T + + ++ R+ SPY + A+ + + R+ LA KE+ +GR+Y ++ Sbjct: 140 VADVQRDQQGTIEAMDALEEVITRFPQSPYARDAQLKIDLCRDHLAGKEMLVGRWYQQQN 199 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 +Y AA R+Q V+ ++ H EA+ RLVE Y+ + L+++AR+ +++ YP W Sbjct: 200 DYPAAAGRYQRVVQDFQTTNHVPEALERLVEVYLDMGLLEQARKTGAVLAYNYPSSKWYT 259 Query: 265 YVETLVK 271 ++ Sbjct: 260 DAYDHLR 266 >gi|323951204|gb|EGB47080.1| outer membrane assembly lipoprotein YfiO [Escherichia coli H252] Length = 249 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 98/241 (40%), Gaps = 17/241 (7%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWRQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + D + + S++V Y NS Y A + +++ Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A + Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233 Query: 249 V 249 V Sbjct: 234 V 234 >gi|323491102|ref|ZP_08096292.1| putative lipoprotein [Vibrio brasiliensis LMG 20546] gi|323314649|gb|EGA67723.1| putative lipoprotein [Vibrio brasiliensis LMG 20546] Length = 241 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 17/242 (7%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 T+ +A+ LVG SS +V D E+Y +A + L+ N+ A + Sbjct: 5 TLSGLLALSVLVGCS--SSEEVVPDVPP-----SELYSEAQVSLQSGNWLTAIDKLEALD 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +PF + + L + Y + E + P + +D+V Y+ G+++ Sbjct: 58 SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKLDWVLYMRGLTHMAQ 117 Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 R+ D K +++ERY +SPY + ++ + +N+LA ++ Sbjct: 118 DRNFMHDLLNTDRSDRDPEPVKKAFADFKKLLERYPDSPYAEDSQKRMYALKNRLAKYDL 177 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +YL+R ++AAI R Q + Y D E A +++ +EAY L L D + +I+ Sbjct: 178 ATADFYLRREAWIAAINRTQELQKTYPDTEAARQSLEIQLEAYKQLGLEDAVQRTQKMIE 237 Query: 255 ER 256 Sbjct: 238 LN 239 >gi|169634098|ref|YP_001707834.1| putative competence protein (ComL) [Acinetobacter baumannii SDF] gi|169152890|emb|CAP01928.1| putative competence protein (ComL) [Acinetobacter baumannii] Length = 385 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 14/253 (5%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y++ AL++ + A VG S+ +D+ ++ ++KA L + A Sbjct: 6 YKITMLALSLGVASAF---VGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDA 61 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ Sbjct: 62 TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYV 121 Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 G+S +M ++ D K+ Q ++ R+ +S Y A + Sbjct: 122 RGVSNMEMNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIG 181 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +LA E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L + Sbjct: 182 QELAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATS 241 Query: 247 REVVSLIQERYPQ 259 ++ + +++ YP Sbjct: 242 QQYIEVLKLNYPS 254 >gi|59711170|ref|YP_203946.1| lipoprotein component of outer membrane protein assembly complex [Vibrio fischeri ES114] gi|197334835|ref|YP_002155321.1| competence lipoprotein ComL [Vibrio fischeri MJ11] gi|59479271|gb|AAW85058.1| lipoprotein component of outer membrane protein assembly complex [Vibrio fischeri ES114] gi|197316325|gb|ACH65772.1| competence lipoprotein ComL [Vibrio fischeri MJ11] Length = 241 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 17/243 (6%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LTI +AV LVG SS DV D E+Y +A + L+ N++ A E Sbjct: 4 LTISSLLAVSLLVGCS--SSDDVIPDIPP-----SELYAQAQVSLQAGNWTSAIERLEAL 56 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF + + L +V Y + E + P D+V Y+ G+++ Sbjct: 57 DSRYPFGAYSEQVQLDLIYVYYKNDDLALGLATIERFTRLNPTHPKADWVLYMRGLTHMA 116 Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 R D + + R++ERY NS Y + A+ + +N+LA E Sbjct: 117 QDRSFMHDLFRVDRSDRDPEPARSAFKDFKRLLERYPNSLYAEDAQTRMYALKNRLADYE 176 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +YL+R +++AI R Q + Y D E A +++ ++ AY L L D + LI Sbjct: 177 LATADFYLRREAWISAINRCQELQRTYPDTEAARKSLTIMLSAYKELKLEDAIKRTEELI 236 Query: 254 QER 256 Sbjct: 237 ALN 239 >gi|193076603|gb|ABO11274.2| putative competence protein (ComL) [Acinetobacter baumannii ATCC 17978] Length = 385 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 14/253 (5%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y++ AL++ + A VG S+ +D+ ++ ++KA L + A Sbjct: 6 YKITMLALSLGVASAF---VGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDA 61 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ Sbjct: 62 TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYV 121 Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 G+S +M ++ D K+ Q ++ R+ +S Y A + Sbjct: 122 RGVSNMEMNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIG 181 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +LA E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L + Sbjct: 182 QELAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATS 241 Query: 247 REVVSLIQERYPQ 259 ++ + +++ YP Sbjct: 242 QQYIEVLKLNYPS 254 >gi|169796975|ref|YP_001714768.1| putative competence protein (ComL) [Acinetobacter baumannii AYE] gi|213156620|ref|YP_002318281.1| putative competence protein [Acinetobacter baumannii AB0057] gi|215484436|ref|YP_002326669.1| Competence lipoprotein comL precursor [Acinetobacter baumannii AB307-0294] gi|260555734|ref|ZP_05827954.1| competence lipoprotein comL [Acinetobacter baumannii ATCC 19606] gi|301346836|ref|ZP_07227577.1| DNA uptake lipoprotein [Acinetobacter baumannii AB056] gi|301511994|ref|ZP_07237231.1| DNA uptake lipoprotein [Acinetobacter baumannii AB058] gi|301594460|ref|ZP_07239468.1| DNA uptake lipoprotein [Acinetobacter baumannii AB059] gi|169149902|emb|CAM87795.1| putative competence protein (ComL) [Acinetobacter baumannii AYE] gi|213055780|gb|ACJ40682.1| putative competence protein [Acinetobacter baumannii AB0057] gi|213986423|gb|ACJ56722.1| Competence lipoprotein comL precursor [Acinetobacter baumannii AB307-0294] gi|260410645|gb|EEX03943.1| competence lipoprotein comL [Acinetobacter baumannii ATCC 19606] Length = 385 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 14/253 (5%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y++ AL++ + A VG S+ +D+ ++ ++KA L + A Sbjct: 6 YKITMLALSLGVASAF---VGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDA 61 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ Sbjct: 62 TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYV 121 Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 G+S +M ++ D K+ Q ++ R+ +S Y A + Sbjct: 122 RGVSNMEMNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIG 181 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +LA E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L + Sbjct: 182 QELAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATS 241 Query: 247 REVVSLIQERYPQ 259 ++ + +++ YP Sbjct: 242 QQYIEVLKLNYPS 254 >gi|77164235|ref|YP_342760.1| transmembrane protein [Nitrosococcus oceani ATCC 19707] gi|254435638|ref|ZP_05049145.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus oceani AFC27] gi|76882549|gb|ABA57230.1| probable transmembrane protein [Nitrosococcus oceani ATCC 19707] gi|207088749|gb|EDZ66021.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus oceani AFC27] Length = 261 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 106/243 (43%), Gaps = 11/243 (4%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 F S+ + +G + Y +A L ++ KA ++ Q Sbjct: 6 FLSLCLVLWLGGCAWLDK-PPPKQPEADWTVERFYAEAKTALDAGDYQKAISFYEQLEAR 64 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-- 144 +PF A+++LL SA+ Y + + A + + +I YP + ++DY +YL G+ Sbjct: 65 YPFGAYAQQALLESAYAYYKFNEPESALAALDRFIRLYPLNSHMDYAHYLKGLVSFHRGV 124 Query: 145 --------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 + D + + L+ +++R+ +S Y + + + RN+LA E+ + Sbjct: 125 GLVEKYIPRDETQRDPESARNALKSFKTLIQRFPDSKYAEDSAQRIVYLRNRLAQHEINV 184 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 YY++RG Y+ AI R + V+ NY EA+ + Y L L + + + +++ Sbjct: 185 AHYYMRRGAYIGAINRAKYVVENYQRTPPVPEALTIMARGYEILGLNELKEDTLRVLEAS 244 Query: 257 YPQ 259 +P Sbjct: 245 FPG 247 >gi|237746822|ref|ZP_04577302.1| competence lipoprotein ComL [Oxalobacter formigenes HOxBLS] gi|229378173|gb|EEO28264.1| competence lipoprotein ComL [Oxalobacter formigenes HOxBLS] Length = 265 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 10/220 (4%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T ++Y +A ++ N+ KA EY+ + +PF A+++ + A+ Y + Sbjct: 30 TVSWPAGKLYREAKDEMRSGNYEKAIEYYEKLESRYPFGVYAQQAQIDIAYAYYRDNEPA 89 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQ----------MIRDVPYDQRATKLMLQY 161 QA + E +I +P N+DY+YYL G+ D +A + Sbjct: 90 QALAAVERFIKLHPNHPNIDYMYYLRGLINFNDRVGLLNFAFRQDLSERDPKAAQDAFDS 149 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 +V RY +S Y K A + + LA E+ + +YY +RG Y+AA R Q + NY Sbjct: 150 FKLLVTRYPDSVYSKDAIYRMKYLVTMLAKYEIHVAKYYYRRGAYLAAANRAQRAINNYP 209 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 ++ EEA+ L E+Y L L D + + + ++ +P Sbjct: 210 ESAVVEEALYILAESYKKLGLYDLSNDADRIFKQNFPDSK 249 >gi|92112629|ref|YP_572557.1| competence lipoprotein ComL, putative [Chromohalobacter salexigens DSM 3043] gi|91795719|gb|ABE57858.1| competence lipoprotein ComL, putative [Chromohalobacter salexigens DSM 3043] Length = 268 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 10/222 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + ++E+Y++A L +S A +PF A ++ L + Y Sbjct: 25 NEPAPDLQEQELYQQAQSALDAGRYSTAVTRLEALDTRYPFGRYAEQAQLELIYAYYQTE 84 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ----------MIRDVPYDQRATKLM 158 ++QA + +I +P+ VDY YY+ G++ Q +I D AT+ Sbjct: 85 DWEQARAAASRFIRLHPDHAQVDYAYYMRGLAAYQAGRFSLEGLELIDISKRDLGATRDA 144 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 +V R+ +SPY AR + RN L+ E+++ +YL++G Y+AAI R + VL Sbjct: 145 NVDFGELVRRFPDSPYAADARQRIVYLRNVLSRHELQVADFYLRKGAYLAAINRGEWVLQ 204 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 +Y +A+A +VE Y+ L + D AR V+ + + P Sbjct: 205 HYPQTPATRDALAVMVEGYLGLDMRDRARTVLQTLIKNDPDN 246 Score = 35.9 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 37/141 (26%), Gaps = 32/141 (22%) Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 D + + + RY Y + A+ + Y + Sbjct: 38 QQAQSALDAGRYSTAVTRLEALDTRYPFGRYAEQAQLELIYA--------------YYQT 83 Query: 204 GEYV---AAIPRFQLV---------------LANYSDAEHAEEAMARLVEAYVALALMDE 245 ++ AA RF + LA Y + E + + + L + Sbjct: 84 EDWEQARAAASRFIRLHPDHAQVDYAYYMRGLAAYQAGRFSLEGLELIDISKRDLGATRD 143 Query: 246 AREVVSLIQERYPQGYWARYV 266 A + R+P +A Sbjct: 144 ANVDFGELVRRFPDSPYAADA 164 Score = 35.9 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 26/67 (38%) Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 G Y A+ R + + Y +AE+A L+ AY ++AR S +P Sbjct: 47 GRYSTAVTRLEALDTRYPFGRYAEQAQLELIYAYYQTEDWEQARAAASRFIRLHPDHAQV 106 Query: 264 RYVETLV 270 Y + Sbjct: 107 DYAYYMR 113 >gi|37525234|ref|NP_928578.1| outer membrane protein assembly complex subunit YfiO [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784661|emb|CAE13561.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 244 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 104/251 (41%), Gaps = 20/251 (7%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 ++ S+A+ G +++ DS E+Y K L++ ++ Sbjct: 2 MIRIKYLVAAATLSLALSGCAG-----NKNAVPDSPP-----AEIYSKGQEKLQKGSYPD 51 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + +PF +++ L + Y + A + + +I P N+DYV Y Sbjct: 52 AIKQLETLDNRYPFGPYSQQVQLDLIYAYYKSSDLPMALASIDRFIRLNPTHPNIDYVLY 111 Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G++ + I D ++ + S++V + NS Y A + Sbjct: 112 MRGLTSQALDNSPLQSFFGIDHSDRDPEHARVAFKDFSQLVRYHPNSLYTADAIKRLMFI 171 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 + +LA E+ + YY KRG YVA + R + +L +Y D + EA+ + AY L L+ + Sbjct: 172 KERLAKYELSVVEYYNKRGAYVAVVNRIEQMLRDYPDTQSTLEALPYMKSAYTHLGLIAQ 231 Query: 246 AREVVSLIQER 256 A +V LI Sbjct: 232 ADKVAKLIAAN 242 >gi|254248089|ref|ZP_04941410.1| Competence lipoprotein ComL [Burkholderia cenocepacia PC184] gi|124872865|gb|EAY64581.1| Competence lipoprotein ComL [Burkholderia cenocepacia PC184] Length = 309 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 14/239 (5%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + G + T ++Y +A L ++ K +YF PF A Sbjct: 59 LIAGCHGLPQKQDE----TATWSNNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFA 114 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI-------- 145 +++ + A+ + + A + +I +P+ ++ Y YYL GM + Sbjct: 115 QQAQINVAYCNWKDNEAAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFS 174 Query: 146 --RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 D +A + +V+R+ S Y A + N LA+ EV YY +R Sbjct: 175 GQDMSERDPQALRESYDAFKVVVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRR 234 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 G YVAAI R QL + +Y A E+A+ ++ +Y L + A + ++ +P + Sbjct: 235 GAYVAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPELAEDTKRVLAGTFPDSPY 293 Score = 42.0 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F FP + A + + +A Y G Y A + + I Y Sbjct: 193 FKVVVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYK 252 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SY ++ + +L + + +SPYV Sbjct: 253 GAPAIEDALHIMILSYGKLNQ--------PELAEDTKRVLAGTFPDSPYVT 295 >gi|262280060|ref|ZP_06057845.1| competence lipoprotein comL [Acinetobacter calcoaceticus RUH2202] gi|262260411|gb|EEY79144.1| competence lipoprotein comL [Acinetobacter calcoaceticus RUH2202] Length = 387 Score = 258 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 108/253 (42%), Gaps = 14/253 (5%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y++ AL++ + A VG S+ +DS ++ +EKA L + A Sbjct: 6 YKITMLALSLGLASAF---VGCSSNPSKKEVVDSGPQ-SSEQAYFEKAQKSLDRGQYLDA 61 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ Sbjct: 62 TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYV 121 Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 ++ + ++ D K+ Q ++ R+ +S Y A + Sbjct: 122 RAVANMEQNYDSLMRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIG 181 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +LA E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L + Sbjct: 182 QELAENEMTAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYSQLGDKATS 241 Query: 247 REVVSLIQERYPQ 259 ++ + +++ YP Sbjct: 242 QQYIEVLKLNYPN 254 >gi|84393595|ref|ZP_00992348.1| DNA uptake lipoprotein [Vibrio splendidus 12B01] gi|84375804|gb|EAP92698.1| DNA uptake lipoprotein [Vibrio splendidus 12B01] Length = 242 Score = 258 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 17/243 (6%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LT+ +AV LVG S+ ++ D V +Y A L+ ++ A E Sbjct: 4 LTLSGLLAVSLLVGCS--STEEIVPDVPPSV-----LYSDAQESLQSGSWLSAIEKLEAL 56 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF + + L + Y + ++ P + D+V Y+ G+++ Sbjct: 57 DSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFLRLNPTHEKQDWVLYMRGLTHMA 116 Query: 144 M----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 I D KL R++ER+ +SPY + A+ + +N+LA + Sbjct: 117 QDRNFMHDIFNIDRSDRDPEPVKLAFADFKRLLERFPSSPYAEDAQKRMFALKNRLAEYD 176 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +YL+R ++AA+ R Q + Y D A +++ +EAY L L D A LI Sbjct: 177 LATADFYLRREAWIAAVNRTQELQKTYPDTIAARKSLDIQLEAYKQLGLEDAASRTEKLI 236 Query: 254 QER 256 + Sbjct: 237 ELN 239 >gi|127513879|ref|YP_001095076.1| putative lipoprotein [Shewanella loihica PV-4] gi|126639174|gb|ABO24817.1| putative lipoprotein [Shewanella loihica PV-4] Length = 252 Score = 258 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 88/228 (38%), Gaps = 10/228 (4%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 D +Y +A ++ N+SKA +PF + L + Y Sbjct: 25 EDDIELSKSSPEVLYSQARTSMELGNYSKAVRSLEALDSRYPFGPHKTQVQLDLIYAYYK 84 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156 + + +I P K++DYVYY+ G+ Q I D +A + Sbjct: 85 LDDSASGIANIDRFIRLNPTHKDIDYVYYMRGLVNMQSDNYMFHDMLNIDRTDRDPKAAQ 144 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + R++++Y NS Y A+ + +N+LA + + YY+K + AA R Q V Sbjct: 145 DAFKDFDRLIKQYPNSKYAADAQKRMQFLKNRLAKYAITVAEYYIKMNAWSAAAVRAQTV 204 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 L Y E A+ + AY L V+ ++Q +P + Sbjct: 205 LETYPGTPSTERALEIMATAYEELGQQKLKDHVLMVMQSNFPNNDMLK 252 >gi|171463621|ref|YP_001797734.1| putative transmembrane protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193159|gb|ACB44120.1| putative transmembrane protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 295 Score = 258 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 14/235 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G TD+ + ++Y +A L + +F+K +YF + FPF ++++ Sbjct: 45 GCAGSDGNKDD----TDIWSEAKLYSEATDKLNDADFAKCGKYFEKLEARFPFGPYSQQA 100 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146 + +A+ + A + QA + +I + S N+DY YYL G+ Sbjct: 101 QINAAYCYWKAQEQTQALVAIDRFIKLHQGSPNLDYAYYLKGLITFNDDLGWLGKFTGQD 160 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A K + +VER+ NS Y A + N LA +V + R+Y +RG Y Sbjct: 161 LSERDPKAAKEAFESFKVVVERFPNSKYTPDAIDRMRYIVNSLAEADVIVARFYYQRGAY 220 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +AA R QLV+ +Y A EEA+ L ++Y L + +++ + + +P Sbjct: 221 LAAANRAQLVIRDYDRAPAVEEALYILTKSYEKLGMTQLSKDSARVFKLNFPDSD 275 >gi|90417172|ref|ZP_01225099.1| competence lipoprotein ComL, putative [marine gamma proteobacterium HTCC2207] gi|90330948|gb|EAS46209.1| competence lipoprotein ComL, putative [marine gamma proteobacterium HTCC2207] Length = 330 Score = 258 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 58/238 (24%), Positives = 100/238 (42%), Gaps = 14/238 (5%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 C +GW + S + T+V + YEK L N+S A FPF Sbjct: 18 GCSWLGWGEEESTEDETSGYTEVDF----YEKIQSSLNASNWSVAISNLELLESQFPFGK 73 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS----------Y 141 A ++ L + Q+ G + + + + +I +P+ NVDY +Y+ G+S Sbjct: 74 YAEQAQLELMYAQFKTGDHDSSIAAADRFIRLHPQHPNVDYAFYVKGLSEVSQATSAFDN 133 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + D + S ++ R+ SPY AR + RNQL E+ + YY Sbjct: 134 FLPTDNSRRDIGTARDAFGTFSELLNRFPKSPYAPDARKRLVNLRNQLGRAEIHVANYYF 193 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 RG Y+AA R + V+ N+ + +A + + Y L + + + V ++ YP+ Sbjct: 194 SRGAYLAAANRGRFVVENFQQTPAVPDGLAVMAQGYQMLGMQELSDHAVEVLAANYPE 251 >gi|157825369|ref|YP_001493089.1| hypothetical protein A1C_01315 [Rickettsia akari str. Hartford] gi|157799327|gb|ABV74581.1| hypothetical protein A1C_01315 [Rickettsia akari str. Hartford] Length = 247 Score = 258 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 76/242 (31%), Positives = 127/242 (52%), Gaps = 7/242 (2%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 I + F +++S D+ + T +Y + V L +Q + KA E F + P Sbjct: 13 IGLVFSGCKSKKTSDDIVVPIPT-------LYNEGVTLLAKQKYKKAAEEFGRVFYQHPG 65 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + ++ LM A+ + A +Y++A + E +I +P + ++ Y YYL +SY ++ DV Sbjct: 66 NAMTPQAELMQAYSLFLAAQYEEAVDVLEMFINLHPANVDIAYAYYLKALSYYMLVSDVN 125 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 +DQ T L ++ R+ N+ Y + + + + LA KE+ +GR+YLK+ +AA Sbjct: 126 HDQSRTSLAKDSFEDVIARFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKQNPMAA 185 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 I RF+ V+ NY H+ EA+ RLVE Y+ L L DEA++ S++ YP W Y L Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLVEIYMMLGLPDEAQKYASVLGYNYPDSPWYSYAYKL 245 Query: 270 VK 271 VK Sbjct: 246 VK 247 >gi|297538119|ref|YP_003673888.1| outer membrane assembly lipoprotein YfiO [Methylotenera sp. 301] gi|297257466|gb|ADI29311.1| outer membrane assembly lipoprotein YfiO [Methylotenera sp. 301] Length = 269 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 14/249 (5%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K+ L + F++ + G + D T +Y+ ++++++ KA YF Sbjct: 2 KYILILMFAL---LMNGCAIFGAPTELDD--TKGLTAERIYQMGSEKMRDKDYDKAIVYF 56 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + +P A ++ L +A+ + + + +I +P NVDY YYL G++ Sbjct: 57 GKLESRYPNGRFAAQAQLETAYAHFKKQDPVLCVAAADRFIKLHPNHPNVDYAYYLKGLA 116 Query: 141 YAQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 + D R+ + +V RY NS Y K A + N L+ Sbjct: 117 VFNERGVIEKLTKQQISDRDPRSLRDSFVTFKDLVTRYPNSKYAKDATQRMVYLANSLSD 176 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 E+++ YY+KR Y+AAI R + VL Y E+A+ ++ AY + L D ++ V Sbjct: 177 HELDVANYYMKRQAYLAAINRCKYVLEYYPQTPGVEQALVTMISAYDLMGLDDLKKDTVR 236 Query: 252 LIQERYPQG 260 +++ YP Sbjct: 237 ILETNYPNS 245 >gi|157369128|ref|YP_001477117.1| outer membrane protein assembly complex subunit YfiO [Serratia proteamaculans 568] gi|157320892|gb|ABV39989.1| putative lipoprotein [Serratia proteamaculans 568] Length = 243 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 15/228 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+D D+ E+Y A L++ NF A +PF +++ L Sbjct: 19 GCSTSKDAVPDNPP-----SEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQL 73 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148 + Y + A + + ++ P N+DYV Y+ G++ + Sbjct: 74 DLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVMYMRGLTDMALDDSALQGFFGVDRS 133 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D + + + S+++++Y NS YV A + +++LA E+ + YY KRG YVA Sbjct: 134 DRDPQHARAAFRDFSQLIQQYPNSQYVTDANKRLVYLKDRLAKYELSVVEYYTKRGAYVA 193 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 + R + +L Y D + +A+ + AY L L +A +V +I Sbjct: 194 VVNRAEQMLREYPDTKATRDALPLMENAYKQLQLNGQADKVAKVIAAN 241 >gi|312881915|ref|ZP_07741678.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122] gi|309370433|gb|EFP97922.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122] Length = 241 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 107/248 (43%), Gaps = 19/248 (7%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K L+ ++V L G SS+DV D E+Y A L+ N++ A + Sbjct: 1 MKKHLLSGLVVLSV--LAGCS--SSKDVVPDIPP-----SELYSDAQSSLQSGNWTNAIK 51 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF + + L + Y + +++ + ++ P ++ +D+V Y+ G Sbjct: 52 KLEALDSRYPFGAYSEQVQLDLIYAYYKNDELALSSATIDRFMRLNPTNERLDWVLYMRG 111 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 +++ I D K ++++RY +S Y + A+ + +N+ Sbjct: 112 LTHMAQDQNFMHSVFNIDRSDRDPEPVKKAFADFKKLLQRYPDSQYAEDAKLRLIALKNR 171 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA ++ +YL+R ++AAI R Q + Y + E A +++ +EAY L + + Sbjct: 172 LANYDLATADFYLRREAWIAAIKRCQEIQKTYPNTEAARQSLPIQLEAYKQLGMQEAIDR 231 Query: 249 VVSLIQER 256 LIQ Sbjct: 232 TKMLIQLN 239 >gi|226328714|ref|ZP_03804232.1| hypothetical protein PROPEN_02609 [Proteus penneri ATCC 35198] gi|225201900|gb|EEG84254.1| hypothetical protein PROPEN_02609 [Proteus penneri ATCC 35198] Length = 244 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 55/248 (22%), Positives = 101/248 (40%), Gaps = 16/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + L G T E+Y + L + N+ A + Sbjct: 1 MRRIKYLVAAATVSLLLAGCSSSDKD------ATADMSPSELYSTSQEKLLDGNYGAAIK 54 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y + + A S + ++ P N+DYV Y+ G Sbjct: 55 QLESLDNRYPFGPYSQQVQLDLIYAYYKSAELPMAISAIDRFMRLNPTHPNIDYVLYMRG 114 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + I D + + + S++V Y +S Y A + +N+ Sbjct: 115 LTAQALDDSALQGFFGIDRSDRDPQHAIVAFKDFSQLVRYYPDSLYAADATKRLVFLKNR 174 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + ++Y KRG YVA I R + ++ +Y D + +A+ + AY L L EA + Sbjct: 175 LAKYELSVAKFYTKRGAYVAVINRVEQMMRDYPDTQATRDALVYMENAYKELGLTQEAEK 234 Query: 249 VVSLIQER 256 V SLI Sbjct: 235 VASLIAAN 242 >gi|332283690|ref|YP_004415601.1| competence lipoprotein precursor [Pusillimonas sp. T7-7] gi|330427643|gb|AEC18977.1| competence lipoprotein precursor [Pusillimonas sp. T7-7] Length = 258 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 14/243 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 A + G T +Y+ A + N++ A +PF Sbjct: 2 AAILIAGCGSTK----VEKDPTTGWSAERLYQDARAEISAGNWNDARTRLEAIEARYPFG 57 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM----------S 140 G A+++L+ A+V + G+ +QA + + + QYP DY+ YL G+ + Sbjct: 58 GYAQQALIDQAYVNWKDGEPEQALAAIDRFQQQYPNHPGTDYMLYLKGLVTFTPPSASFT 117 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 D + + + ++ RY +S Y A+ VT N +A EV + YY Sbjct: 118 NITRQDPSERDPKGLRESYDSFNELIARYPDSRYTADAKKRVTWLVNTIAQNEVHVATYY 177 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 +RG YVAAI R Q V+ ++ +E+A+ +V AY L L + + ++ E +P Sbjct: 178 YERGAYVAAINRAQTVVTDFQGVPASEKALYIMVLAYDKLQLPELRDDAKRVLDENFPNS 237 Query: 261 YWA 263 + Sbjct: 238 KYY 240 Score = 35.5 bits (81), Expect = 7.6, Method: Composition-based stats. Identities = 16/114 (14%), Positives = 36/114 (31%), Gaps = 22/114 (19%) Query: 78 EYFNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQ 123 + FN+ +P + + + A Y G Y A + + +T Sbjct: 137 DSFNELIARYPDSRYTADAKKRVTWLVNTIAQNEVHVATYYYERGAYVAAINRAQTVVTD 196 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + + Y++ ++Y ++ D + E + NS Y + Sbjct: 197 FQGVPASEKALYIMVLAYDKLQLPELRD--------DAKRVLDENFPNSKYYEQ 242 >gi|329120442|ref|ZP_08249107.1| competence lipoprotein ComL [Neisseria bacilliformis ATCC BAA-1200] gi|327461900|gb|EGF08230.1| competence lipoprotein ComL [Neisseria bacilliformis ATCC BAA-1200] Length = 267 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 105/241 (43%), Gaps = 11/241 (4%) Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 + + D +T ++Y +A L N+++A + + FP A+++ Sbjct: 17 CASKGTSDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVKLYELLESRFPQGRYAQQAQ 75 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV--------- 148 L +A+ Y + ++A + E + +P+ N+DY YL G+ Sbjct: 76 LDTAYAYYKDEEREKALAAVERFQKLHPQHPNMDYALYLKGLILFNEDPSFLNKLAAQDW 135 Query: 149 -PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 D +A + Q S +V+RY S YV+ A + + LA E+ + RYY KRG Y+ Sbjct: 136 SDRDPKANREAYQAFSELVQRYPQSKYVEDASARMAKLVDALAGNEMAVARYYAKRGAYL 195 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 AA R Q ++ + + EEA+A + +Y + A + ++Q+ +PQ + Sbjct: 196 AAANRAQNIVTGFQNTRFVEEALAIMELSYQKMGRPQLAEDTRRILQQNFPQSPYLTRPW 255 Query: 268 T 268 Sbjct: 256 K 256 >gi|330831469|ref|YP_004394421.1| ComL family lipoprotein [Aeromonas veronii B565] gi|328806605|gb|AEB51804.1| Lipoprotein, ComL family [Aeromonas veronii B565] Length = 254 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 17/255 (6%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 K L + ++ + G S++ D + +Y+KA L L N+ +A E Sbjct: 6 KKSHLLMSLALVATLITGCS--STKPKVPDEPPET-----LYQKARLKLDVGNYVQATEL 58 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 +PF + + L + Y QA + + +I P KN+DYV+Y+ G+ Sbjct: 59 LEALDSRYPFGAYSNQVQLDLIYAYYKQDDTAQAIANIDRFIRLNPAHKNIDYVFYMRGL 118 Query: 140 SYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + I D + Q +++ Y NS Y AR + +N+L Sbjct: 119 TNMAADYNFFQSLFGIDRDDKDPAYARQAFQDFKTLLQNYPNSVYAADARARMIGLKNRL 178 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A ++ + YY+KR VAA R +L++ Y D E+A+ +VE+Y +L + A+ Sbjct: 179 ARYDLSVAEYYVKRDALVAAANRAKLIVETYPDTAETEKALEIMVESYDSLKMPQLAKHA 238 Query: 250 VSLIQERYPQGYWAR 264 ++ + YP+ AR Sbjct: 239 REVLAKNYPENRLAR 253 >gi|51473383|ref|YP_067140.1| lipoprotein [Rickettsia typhi str. Wilmington] gi|51459695|gb|AAU03658.1| probable lipoprotein [Rickettsia typhi str. Wilmington] Length = 251 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 78/254 (30%), Positives = 134/254 (52%), Gaps = 8/254 (3%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 +L K L+ F I + +++S D+ + T +Y + ++ L ++ + KA Sbjct: 2 KLTKL-LSAFLVIGLILSGCKSKKNSNDIVVPIAT-------LYNEGIILLDKKKYKKAA 53 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E F + P + ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL Sbjct: 54 EEFGKIFYQHPGNEMTPQAELMQAYALFLAAQYEEAVDILDMFINLHPANVDIAYAYYLK 113 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 +SY +I DV +DQ T L ++ ++ N+ Y A + + + LA KE+ IG Sbjct: 114 ALSYYMLISDVNHDQSRTFLSKDSFEDVITKFPNTKYAIDASLKIDLVNDHLAGKEMMIG 173 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 R+YLK+ +AAI RF+ V+ NY H+ EA+ RLVE+Y+ L L DEA++ S++ Y Sbjct: 174 RFYLKKKNPIAAINRFEEVIDNYQTTYHSVEALYRLVESYMMLGLHDEAKKYASVLGYNY 233 Query: 258 PQGYWARYVETLVK 271 P W Y LVK Sbjct: 234 PDSKWYSYAYRLVK 247 >gi|149926151|ref|ZP_01914413.1| probable transmembrane protein [Limnobacter sp. MED105] gi|149824969|gb|EDM84181.1| probable transmembrane protein [Limnobacter sp. MED105] Length = 282 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 18/266 (6%) Query: 7 RAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66 + W L + L A+ ++ T+ +YE+A Sbjct: 4 TTLAPRTTWLRSLSQLFLIPALIFALAACGSAKQFDE--------TEGWSPARLYEEAKA 55 Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 + N+ + E + +P+ A+++ + +AF Y AG QA + + +I YP Sbjct: 56 EIDVGNYERGIELLEKLEARYPYGRFAQQAQIDTAFAYYKAGDNAQALAATDRFIKLYPN 115 Query: 127 SKNVDYVYYLVGMSYAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVK 176 +N+DYVYYL G+ + + D + T+ +V R+ +S Y + Sbjct: 116 HQNLDYVYYLRGLISFNEDKGIFSLLSGEDQSARDPKGTRAAFDAFKEVVSRFPDSKYYE 175 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 ++ + N LA E+ + RYY KRG Y+AA+ R Q V+ + EEA+ + + Sbjct: 176 DSKSRLQYLVNALAQNELHVARYYYKRGAYLAAVNRAQEVVRRFEQTPSIEEALFISLRS 235 Query: 237 YVALALMDEAREVVSLIQERYPQGYW 262 Y L + A + +I + + Sbjct: 236 YEKLNMTALAADTKRVINLNFKDSPY 261 >gi|332876322|ref|ZP_08444095.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii 6014059] gi|322507011|gb|ADX02465.1| Putative competence protein [Acinetobacter baumannii 1656-2] gi|323516879|gb|ADX91260.1| DNA uptake lipoprotein [Acinetobacter baumannii TCDC-AB0715] gi|332735473|gb|EGJ66527.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii 6014059] Length = 376 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 12/246 (4%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + +A F VG S+ +D+ ++ ++KA L + A + Sbjct: 2 LALSLGVASAF-VGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDATKSLEAI 59 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ G+S + Sbjct: 60 DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNME 119 Query: 144 M----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 M ++ D K+ Q ++ R+ +S Y A + +LA E Sbjct: 120 MNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQELAESE 179 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++ + ++ Sbjct: 180 MNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQYIEVL 239 Query: 254 QERYPQ 259 + YP Sbjct: 240 KLNYPS 245 >gi|261364921|ref|ZP_05977804.1| competence lipoprotein ComL [Neisseria mucosa ATCC 25996] gi|288566704|gb|EFC88264.1| competence lipoprotein ComL [Neisseria mucosa ATCC 25996] Length = 268 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 53/237 (22%), Positives = 102/237 (43%), Gaps = 10/237 (4%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +T ++Y +A L N+++A + + FP A++ Sbjct: 15 GACASNKGTVDKDAQITQDWNVEKLYAEAHDELNSSNYTRAIKLYEILESRFPNGRYAQQ 74 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV------- 148 + L +A+ Y + ++A + + + +P+ N+DY YL G+ + Sbjct: 75 AQLDTAYAYYKDDEPEKALAAIDRFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQ 134 Query: 149 ---PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 D +A + Q + +V+RY S Y A + + L E+ + RYY+KRG Sbjct: 135 DWSDRDPKANRSAYQAFAELVQRYPESKYAADATERMAKLVDALGGNEISVARYYMKRGA 194 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 Y+AA+ R Q ++ Y + + EEA+A + AY L A + +++ +PQ + Sbjct: 195 YLAAVNRAQKIVERYQNTRYVEEALAMMELAYKKLDKPQLAADTRRVLETNFPQSPF 251 >gi|300718036|ref|YP_003742839.1| outer membrane assembly lipoprotein [Erwinia billingiae Eb661] gi|299063872|emb|CAX60992.1| outer membrane assembly lipoprotein [Erwinia billingiae Eb661] Length = 243 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 15/228 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 S++ D+ E+Y A L++ NF A +PF +++ L Sbjct: 19 GCSGSKETVPDNPP-----SEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQL 73 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDV 148 + Y A + + ++ P N+DYV Y+ G++ + I Sbjct: 74 DLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRS 133 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D + S+++ Y NS Y AR + +++LA E+ + ++Y KR YVA Sbjct: 134 DRDPTHARDAFHDFSQLLRGYPNSQYATDARKRLVYLKDRLAKYELSVAQFYTKREAYVA 193 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 + R + ++ +Y D + A+ + AY L L EA +V LI Sbjct: 194 VVNRVEQMMKDYPDTQATRTALPLMENAYRQLQLNAEADKVAKLIAAN 241 >gi|218673357|ref|ZP_03523026.1| competence lipoprotein protein [Rhizobium etli GR56] Length = 248 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 92/249 (36%), Positives = 146/249 (58%), Gaps = 5/249 (2%) Query: 19 LYKFALTIFFSI----AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74 + K A +F S+ A + G + D+ + +Y + + +K N + Sbjct: 1 MMKTARALFASLLVLSAGASISGCQSDPDIDIT-KLGLETDPPDVLYTQGLANMKAGNMA 59 Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 +A F+ R+ PF+ ARK+L+MS FV+Y G+ A + G Y+ QYP+S++ YV Sbjct: 60 EAARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALASGNRYMAQYPKSQDAAYVQ 119 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 YLVG++Y++ I DV DQRA+ ++ M +V+ Y NS YV A+ + R+QLA KE+ Sbjct: 120 YLVGLTYSKQIVDVTQDQRASAKTIEAMQAVVDNYPNSEYVDDAQAKIRYARDQLAGKEM 179 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +IGRYY++R EY+AAI RF++V+ Y + EEA+ARLVEAY A+ ++DEA+ +++ Sbjct: 180 QIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLG 239 Query: 255 ERYPQGYWA 263 YP W Sbjct: 240 HNYPDSQWY 248 >gi|253990667|ref|YP_003042023.1| outer membrane protein assembly complex subunit YfiO [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782117|emb|CAQ85281.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 243 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + L G +++V DS E+Y L++ N+ A Sbjct: 1 MIRMKYLVAAATLSLVLSGCS--GNKNVVPDSPP-----SEIYSAGQEKLRDGNYKAAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y + A + + ++ P N+DYV Y+ G Sbjct: 54 QLETLDNRYPFGPYSQQVQLDLIYAYYKSSDLPMALASIDRFMRLNPTHPNIDYVLYMRG 113 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + I D + + S++V Y NS Y AR + + + Sbjct: 114 LTSQALDDSTLQSFFGIDRSDRDPEHARASFRDFSQLVRHYPNSLYAADARKRLMFIKER 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + +YY KRG YVA + R + +L +Y D + +A+ + AY L L +A + Sbjct: 174 LAKYELSVVKYYNKRGAYVAVVNRAEQMLHDYPDTQSTLKALPYMERAYTRLGLTAQADK 233 Query: 249 VVSLIQER 256 V LI Sbjct: 234 VTKLIAAN 241 >gi|307132188|ref|YP_003884204.1| putative lipoprotein [Dickeya dadantii 3937] gi|306529717|gb|ADM99647.1| predicted lipoprotein [Dickeya dadantii 3937] Length = 244 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 101/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + L G +S+D D R E+Y A L++ NF A Sbjct: 1 MTRMKYLVAAATLSLTLAGCS--NSKDAVPD-----RPPSELYATAQEKLQDGNFKAAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y + + A + + +I P NVDYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKSAELPLAQASIDRFIRLNPTHPNVDYVLYMRG 113 Query: 139 MSYAQMIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ D + + + S++++ Y NS Y + + + Sbjct: 114 LTNMAQDDSTLQGFFGVDRSDRDPQYARSAFKAFSQLLQGYPNSQYATDTSKRLAFLKER 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + +YY KRG YVA + R + +L +Y D + A+ + AY L L +A + Sbjct: 174 LAKYELSVAQYYTKRGAYVAVVNRVEQMLKDYPDTQATRTALPLMENAYRELQLTAQADK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|254504434|ref|ZP_05116585.1| outer membrane assembly lipoprotein YfiO [Labrenzia alexandrii DFL-11] gi|222440505|gb|EEE47184.1| outer membrane assembly lipoprotein YfiO [Labrenzia alexandrii DFL-11] Length = 268 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 68/230 (29%), Positives = 125/230 (54%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 SS+D + + + ++ + + + + F + + +P++ ++KSL+ Sbjct: 15 CSSKDEFDELALNDTPAEVLFNEGLALRAQGKLRDSTAKFEELDKLYPYSEYSKKSLVNL 74 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A++ Y+ GKY + + ++T YP + Y+ YLVG SY + + D+ DQ T+ Sbjct: 75 AYLNYTRGKYTETVTTANRFVTLYPGDPDSAYMLYLVGQSYYRQMPDITRDQATTERAAS 134 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 +++R+ S YV A+ + + ++QL KE+++GRYYL+R YVAA+ RF+ V+ NY Sbjct: 135 AYGELLQRFPESEYVPDAQRKLLIVQDQLGGKEMQVGRYYLERRNYVAAVNRFKTVVNNY 194 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 H EEA+ RL EAY AL ++ EA+ +++ +P W + TL+ Sbjct: 195 QTTRHVEEALFRLTEAYYALGVISEAQTAAAVLGHNFPDTQWYKDAYTLL 244 >gi|317401791|gb|EFV82406.1| competence lipoprotein [Achromobacter xylosoxidans C54] Length = 262 Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 101/251 (40%), Gaps = 14/251 (5%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + AV + G +S+ T ++Y A + + +A E Sbjct: 3 VVIALFAVIAIAGCGSTNSKYDK----TTNWSAEQLYADAKAEISSGGWKEARERLTAIE 58 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ- 143 +PF A+++LL A+V + G+ +QA + + + YP DY YL G+ Sbjct: 59 SRYPFGVYAQQALLELAYVNWKDGENEQALAAIDRFQQLYPNHPGTDYALYLKGLINFTP 118 Query: 144 ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 D + + + +++RY S Y A V N +A EV Sbjct: 119 ASAFMSSITGQDPAERDPKGLRASYDAFNDLIKRYPESKYTPDAEKRVAWLVNTIAMNEV 178 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 + RYY +RG Y+AA R Q V+ ++ A EEA+ +V++Y L + + + + Sbjct: 179 HVARYYYERGAYIAAANRAQTVITDFEGAPATEEALYLMVQSYDKLGMTELKNDSQRVFD 238 Query: 255 ERYPQGYWARY 265 + +P + Sbjct: 239 KNFPNSTFKDK 249 >gi|254252276|ref|ZP_04945594.1| competence lipoprotein ComL [Burkholderia dolosa AUO158] gi|124894885|gb|EAY68765.1| competence lipoprotein ComL [Burkholderia dolosa AUO158] Length = 309 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 95/239 (39%), Gaps = 14/239 (5%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + G + T ++Y +A L ++ K +YF PF A Sbjct: 59 LIAGCHGLPQKQDE----TATWSNNKLYSEAQDALSGGDWGKCAKYFEALQGRDPFGHFA 114 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI-------- 145 +++ + A+ + + A + +I +P+ ++ Y YYL GM + Sbjct: 115 QQAQINVAYCNWKDNEIAAADQAVDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFS 174 Query: 146 --RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 D +A + +V+RY S Y A + N LA+ EV YY +R Sbjct: 175 GQDMSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRR 234 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 G YVAAI R QL + +Y A E+A+ +V +Y L A + ++ +P + Sbjct: 235 GAYVAAINRAQLAIKDYKGAPAIEDALHIMVLSYGKLNQPQLAEDTKRVLAGTFPDSPY 293 >gi|259909397|ref|YP_002649753.1| outer membrane protein assembly complex subunit YfiO [Erwinia pyrifoliae Ep1/96] gi|224965019|emb|CAX56549.1| Outer membrane assembly lipoprotein YfiO [Erwinia pyrifoliae Ep1/96] gi|283479470|emb|CAY75386.1| UPF0169 lipoprotein PD_1756 precursor [Erwinia pyrifoliae DSM 12163] Length = 243 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 15/228 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 SRDV DS E+Y A L++ NF+ A +PF +++ L Sbjct: 19 GCSGSRDVVPDSPP-----SEIYATAQQKLQDGNFNGAITQLEALDNRYPFGPYSQQVQL 73 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDV 148 + Y A + + ++ P N+DYV Y+ G++ + I Sbjct: 74 DLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRS 133 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D + + S+++ Y NS Y AR + +++LA E+ + +Y KR YVA Sbjct: 134 DRDPTHARDAFKDFSQLLRGYPNSQYATDARKRLVFLKDRLAKYELSVAEFYTKRAAYVA 193 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 + R + +L +Y D +A+ + AY L L +A V +I Sbjct: 194 VVNRVEQMLKDYPDTLATRKALPLMENAYRKLQLNAQAERVAKIIAAN 241 >gi|332855565|ref|ZP_08435939.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii 6013150] gi|332868376|ref|ZP_08438122.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii 6013113] gi|332727389|gb|EGJ58822.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii 6013150] gi|332733435|gb|EGJ64616.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii 6013113] Length = 376 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 12/246 (4%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + +A F VG S+ +D+ ++ ++KA L + A + Sbjct: 2 LALSLGVASAF-VGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDATKSLEAI 59 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ G+S + Sbjct: 60 DTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNME 119 Query: 144 M----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 M ++ D K+ Q ++ R+ +S Y A + +LA E Sbjct: 120 MNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQELAESE 179 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++ + ++ Sbjct: 180 MNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQYIEVL 239 Query: 254 QERYPQ 259 + YP Sbjct: 240 KLNYPS 245 >gi|297172748|gb|ADI23714.1| DNA uptake lipoprotein [uncultured Oceanospirillales bacterium HF4000_21D01] Length = 327 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 66/240 (27%), Positives = 111/240 (46%), Gaps = 16/240 (6%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 I+ C G D D + + + + Y +A+ L Q+F+ A + FPF Sbjct: 18 ISACGWFG------DDEDADEFSGLSTEEQFYRRALDQLNGQSFNAAISTYQALESRFPF 71 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----- 144 A ++ + + Y + A + + +I +PE++NVDY YY+ G+S Sbjct: 72 GRFAAQAQIEIVYAYYRNNDVEAARAAADRFIRLHPENENVDYAYYMKGLSSFSDNRGLL 131 Query: 145 -----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 I D ++ S+++ Y +SPY AR + RN LAA E+ + Y Sbjct: 132 NRFLPIDPTKRDPGRSRESFSDFSQLLALYPDSPYAADARARMIFLRNNLAAYEIHVANY 191 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YL+R Y+AA+ R Q V+ N+ +A ++E Y+ L L D A ++L++E YPQ Sbjct: 192 YLERSAYIAALRRGQYVVENFQGTPAVAYGVAIMIEGYLRLGLDDLADTSLALLRENYPQ 251 >gi|309782613|ref|ZP_07677335.1| competence lipoprotein ComL [Ralstonia sp. 5_7_47FAA] gi|308918588|gb|EFP64263.1| competence lipoprotein ComL [Ralstonia sp. 5_7_47FAA] Length = 258 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 58/247 (23%), Positives = 107/247 (43%), Gaps = 14/247 (5%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 +A + + T ++Y +A L +++KA +Y+ + +P Sbjct: 3 GVACLAISACGILPEQQDE----TAGWSANKLYSEAKDSLDGGDYAKAVKYYEKLESRYP 58 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---- 144 F A+++ + +A+ Y G+ A + + +I +P +VDY YYL G+ Sbjct: 59 FGQYAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLNGLINFNDNLGW 118 Query: 145 ------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D +A + + R+ NS Y A + N +A EV R Sbjct: 119 LGRFSNQDLSERDPKAARAAYDAFKTLFTRFPNSKYTPDATQRMQYIVNAMAEHEVGAAR 178 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YY +RG Y+AA+ R Q + +Y A EEA+ ++++Y AL + D + +I++ YP Sbjct: 179 YYYRRGAYLAAVNRAQDAIKDYDRAPAVEEALYIMMKSYEALGMKDMRDDTERIIKQNYP 238 Query: 259 QGYWARY 265 + + Y Sbjct: 239 KSDFLAY 245 >gi|260553982|ref|ZP_05826247.1| competence lipoprotein comL [Acinetobacter sp. RUH2624] gi|260404868|gb|EEW98373.1| competence lipoprotein comL [Acinetobacter sp. RUH2624] Length = 373 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 58/253 (22%), Positives = 111/253 (43%), Gaps = 14/253 (5%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y++ AL++ + A VG S+ +D+ ++ +EKA L + +A Sbjct: 6 YKITMLALSLGVASAF---VGCSSNPSKKEVVDTGPQ-SSEQAYFEKAQKSLDRGQYLEA 61 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ Sbjct: 62 TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYV 121 Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 G+S ++ ++ D K+ Q ++ R+ +S Y A + Sbjct: 122 RGVSNMELNYDSLLRYTSLQQSHRDISYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIG 181 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +LA E+ R+ +KR +VAA R Q V+ +Y EA+A L +Y L + Sbjct: 182 QELAESEMNAARFNVKRKAWVAAAERSQWVIEHYPQTPQIPEALATLAYSYDQLGDKATS 241 Query: 247 REVVSLIQERYPQ 259 ++ + +++ YP Sbjct: 242 QQYIEVLKLNYPS 254 >gi|206560229|ref|YP_002230993.1| putative lipoprotein [Burkholderia cenocepacia J2315] gi|198036270|emb|CAR52166.1| putative lipoprotein [Burkholderia cenocepacia J2315] Length = 274 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 14/239 (5%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + G + T ++Y +A L ++ K +YF PF A Sbjct: 24 LIAGCHGLPQKQDE----TATWSNNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFA 79 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI-------- 145 +++ + A+ + + A + +I +P+ ++ Y YYL GM + Sbjct: 80 QQAQINVAYCNWKDNEPAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFS 139 Query: 146 --RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 D +A + +V+R+ S Y A + N LA+ EV YY +R Sbjct: 140 GQDMSERDPQALRESYDAFKVVVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRR 199 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 G YVAAI R QL + +Y A E+A+ ++ +Y L + A + ++ +P + Sbjct: 200 GAYVAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPELAEDTKRVLAGTFPDSPY 258 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F FP + A + + +A Y G Y A + + I Y Sbjct: 158 FKVVVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYK 217 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SY ++ + +L + + +SPYV Sbjct: 218 GAPAIEDALHIMILSYGKLNQ--------PELAEDTKRVLAGTFPDSPYVT 260 >gi|270264066|ref|ZP_06192334.1| hypothetical protein SOD_f02840 [Serratia odorifera 4Rx13] gi|270042259|gb|EFA15355.1| hypothetical protein SOD_f02840 [Serratia odorifera 4Rx13] Length = 243 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 15/228 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+D D+ E+Y A L++ NF A +PF +++ L Sbjct: 19 GCSTSKDAVPDNPP-----SEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQL 73 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148 + Y + A + + ++ P N+DYV Y+ G++ + Sbjct: 74 DLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVMYMRGLTDMALDDSALQGFFGVDRS 133 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D + + + S+++++Y S YV A + +++LA E+ + YY KRG YVA Sbjct: 134 DRDPQHARAAFRDFSQLIQQYPTSQYVTDANKRLVYLKDRLAKYELSVVEYYTKRGAYVA 193 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 + R +L Y D + +A+ + AY L L +A +V +I Sbjct: 194 VVNRADQMLREYPDTQATRDALPLMENAYKQLQLNGQADKVAKVIAAN 241 >gi|254230256|ref|ZP_04923647.1| hypothetical protein VEx25_0358 [Vibrio sp. Ex25] gi|262395164|ref|YP_003287018.1| putative component of the lipoprotein assembly complex [Vibrio sp. Ex25] gi|151937236|gb|EDN56103.1| hypothetical protein VEx25_0358 [Vibrio sp. Ex25] gi|262338758|gb|ACY52553.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio sp. Ex25] Length = 242 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 17/242 (7%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 T+ +AV L G S++ + V E+Y A + L+ N+ A E Sbjct: 5 TLTGLLAVSLLFGCA---SKEEIVPDVP----PSELYADAQISLQSGNWLSAIEKLEALD 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +PF + + L + Y + ++ P + +D+V Y+ G+S+ Sbjct: 58 SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQ 117 Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 R+ D K ++++RY NSPY + ++ + +N+LA ++ Sbjct: 118 DRNFMHDLFSVDRSDRDPEPVKKAFDDFKKLLQRYPNSPYAEDSQKRMVALKNRLANYDL 177 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +YL+R +VAAI R Q + + D E A +++ +EAY L L D LI+ Sbjct: 178 ATADFYLRREAWVAAINRSQELQKAFPDTEAARKSLTIQLEAYKQLGLEDAVARTEKLIE 237 Query: 255 ER 256 Sbjct: 238 LN 239 >gi|262369408|ref|ZP_06062736.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262315476|gb|EEY96515.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 327 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 17/254 (6%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSK 75 Y++ ALTI + A+ VG ++V T + +VY +KA L+ ++ Sbjct: 6 YKMTMLALTIGIASAM---VGCSSNPKKEVVD---TGPQSSEQVYIQKAEKALQSGQYTD 59 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A ++ +P A+++ L +V++ Y+ A +L + +I P+ NVDY YY Sbjct: 60 AAKHLEALDTYYPTGEYAQQAQLELLYVKFQQKDYEGAIALADRFIRLNPQHPNVDYAYY 119 Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G++ + ++ D K+ Q + RY +S Y A + Sbjct: 120 VRGVANMEQNYDGLIRYTSLKQAHRDVSYLKVAYQNFVDFIRRYPSSTYAVDAAQRMKFI 179 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 N+LA E+ R+ +KR +VAA+ R Q V+ +Y + EA+A + +Y L Sbjct: 180 SNELAESEMNAARFNIKRKAWVAALERAQWVIEHYPQSPQVPEALATVAYSYDQLGDKQT 239 Query: 246 AREVVSLIQERYPQ 259 A++ +++ YP Sbjct: 240 AQQYTDVLKLNYPN 253 >gi|269966584|ref|ZP_06180665.1| putative lipoprotein [Vibrio alginolyticus 40B] gi|269828769|gb|EEZ83022.1| putative lipoprotein [Vibrio alginolyticus 40B] Length = 242 Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 17/242 (7%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 T+ +AV L G S++ + V E+Y A + L+ N+ A E Sbjct: 5 TLTGLLAVSLLFGCA---SKEEIVPDVP----PSELYADAQISLQSGNWLSAIEKLEALD 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +PF + + L + Y + ++ P + +D+V Y+ G+S+ Sbjct: 58 SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQ 117 Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 R+ D K ++++RY NSPY + ++ + +N+LA ++ Sbjct: 118 DRNFMHDLFSVDRSDRDPEPVKKAFDDFKKLLQRYPNSPYAQDSQKRMVALKNRLANYDL 177 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +YL+R +VAAI R Q + + D E A +++ +EAY L L D LI+ Sbjct: 178 ATADFYLRREAWVAAINRSQELQKAFPDTEAARKSLTIQLEAYKQLGLEDAVARTEKLIE 237 Query: 255 ER 256 Sbjct: 238 LN 239 >gi|99080532|ref|YP_612686.1| competence lipoprotein ComL, putative [Ruegeria sp. TM1040] gi|99036812|gb|ABF63424.1| competence lipoprotein ComL putative [Ruegeria sp. TM1040] Length = 283 Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 75/248 (30%), Positives = 118/248 (47%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A I + L + ++YE+ L A +F++ Sbjct: 8 AKGIGVVALMATLAACGGADGDAQRSSLDLEGFSPAQIYERGEFELARSREKDAAYFFSE 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 R +P++ A++SL+M AF + A Y+ + S + YI YP + Y YL+ +SY Sbjct: 68 VERLYPYSEWAKQSLIMQAFTYHQAEDYENSRSAAQRYIDFYPTDADAAYAQYLLALSYY 127 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 I +V DQ T LQ + ++E Y S Y A + + LA KE+EIGRYYLK Sbjct: 128 DQIDEVGRDQGLTFQALQALRTVIEVYPESEYASSAILKFDLAFDHLAGKEMEIGRYYLK 187 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 R Y AAI RF++V+ ++ H EA+ RL+EAY++L L DEA+ +++ + W Sbjct: 188 RQHYSAAINRFRVVVEDFQTTSHTAEALYRLIEAYLSLGLTDEAQSAGAILGHNFQSTDW 247 Query: 263 ARYVETLV 270 L+ Sbjct: 248 YEDGYRLL 255 >gi|30248521|ref|NP_840591.1| TPR repeat-containing protein [Nitrosomonas europaea ATCC 19718] gi|30138407|emb|CAD84417.1| TPR repeat [Nitrosomonas europaea ATCC 19718] Length = 255 Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 60/243 (24%), Positives = 108/243 (44%), Gaps = 18/243 (7%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 L S + V + Y +A L E N++ A + F +P+ A Sbjct: 1 MLAACGILSEKTVD----HSKWSASKFYVEAKNELNEGNYAAAVKLFEALEARYPYGRYA 56 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----- 148 +++ L A+ Y ++ A + E +I YP +N+DY YY+ G++ + + Sbjct: 57 QQAQLEIAYAYYKDQEHASAIAAAERFIQLYPHHQNIDYAYYIKGLASFNDDQGLMGYIT 116 Query: 149 ---------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 D +A++ + + ++V RY +S Y A + N LA E+ + +Y Sbjct: 117 HKIIKQDMSERDAKASRESFESLKQLVTRYPDSKYTPDALQRMAYLVNALARGEIHVAQY 176 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y+KR YVAAI R Q +L Y E+A+ + AY L + D +V +I++ +P+ Sbjct: 177 YMKRKAYVAAIKRAQFILEEYPQTPATEDALYIMAVAYGELGMTDLREDVEKVIRKNFPE 236 Query: 260 GYW 262 + Sbjct: 237 SIY 239 >gi|255065279|ref|ZP_05317134.1| competence lipoprotein ComL [Neisseria sicca ATCC 29256] gi|255050700|gb|EET46164.1| competence lipoprotein ComL [Neisseria sicca ATCC 29256] Length = 268 Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 52/237 (21%), Positives = 102/237 (43%), Gaps = 10/237 (4%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +T ++Y +A L N+++A + + FP A++ Sbjct: 15 GACASNKGTVDKDAQITQDWNVEKLYAEAHDELNSSNYTRAIKLYEILESRFPNGRYAQQ 74 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV------- 148 + L +A+ Y + ++A + + + +P+ N+DY YL G+ + Sbjct: 75 AQLDTAYAYYKDDEPEKALAAIDRFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQ 134 Query: 149 ---PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 D +A + Q + +V+RY S Y A + + L E+ + RYY+KRG Sbjct: 135 DWSDRDPKANRSAYQAFAELVQRYPESKYAADATERMAKLVDALGGNEISVARYYMKRGA 194 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 Y+AA+ R Q ++ Y + + EE++A + AY L A + +++ +PQ + Sbjct: 195 YLAAVNRAQKIVERYQNTRYVEESLAMMELAYKKLDKPQLAADTRRVLETNFPQSPF 251 >gi|251788632|ref|YP_003003353.1| outer membrane protein assembly complex subunit YfiO [Dickeya zeae Ech1591] gi|247537253|gb|ACT05874.1| outer membrane assembly lipoprotein YfiO [Dickeya zeae Ech1591] Length = 243 Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 101/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + L G +S+D D R E+Y A L++ NF A Sbjct: 1 MTRMKYLVAAATLSLTLAGCS--NSKDAVPD-----RPPSELYATAQEKLQDGNFKAAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y + + A + + +I P NVDYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKSAELPLAQASIDRFIRLNPTHPNVDYVLYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ D + + + S++++ Y NS Y + + + Sbjct: 114 LTNMAQDDSALQGFFGVDRSDRDPQYARAAFKAFSQLLQGYPNSQYATDTSKRLAFLKER 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + +YY KRG YVA + R + +L +Y D + A+ + AY L L +A + Sbjct: 174 LAKYELSVAQYYTKRGAYVAVVNRVEQMLKDYPDTQATRTALPLMENAYRELQLTAQADK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIATN 241 >gi|315498683|ref|YP_004087487.1| outer membrane assembly lipoprotein yfio [Asticcacaulis excentricus CB 48] gi|315416695|gb|ADU13336.1| outer membrane assembly lipoprotein YfiO [Asticcacaulis excentricus CB 48] Length = 302 Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 120/221 (54%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 V + R +Y + L E+++++A +YF + R P++ +R+S++M + Y A Y Sbjct: 45 VYEERPVEALYNTGMQRLDEKSWNEAVDYFEEVERQHPYSEWSRRSIIMEIYAHYQANDY 104 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 ++ + E +I YP S Y YY+ ++Y + I DV DQ T+ Y+ IV+RY Sbjct: 105 NESTAAAERFIKLYPGSPLTPYAYYMRAINYFEQIVDVGRDQAYTETAQAYLREIVQRYP 164 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 + Y + A+ + + +QLA KE+EIGR+YL + + +AAI RF+ V+ Y H EA+ Sbjct: 165 GTEYARDAQVKLDMVYDQLAGKEMEIGRFYLAQNQPLAAIGRFKTVITRYQTTSHTPEAL 224 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 RLVEA + + + DEA +++ Y W L++ Sbjct: 225 YRLVEANLMMGITDEANRNAAVLGYNYAGDRWYTAAYKLMQ 265 >gi|183597511|ref|ZP_02959004.1| hypothetical protein PROSTU_00784 [Providencia stuartii ATCC 25827] gi|188023156|gb|EDU61196.1| hypothetical protein PROSTU_00784 [Providencia stuartii ATCC 25827] Length = 243 Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 103/248 (41%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + L G + V+ E+Y L++ N+ A + Sbjct: 1 MIRIKYLVAAATLSLVLTGCSSN-------NEVSPDSTPAEMYSIGQQKLQDGNYKAAIK 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF A++ L + Y + + A + + ++ P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYAQQVQLDLIYAYYKSAELPMAIAAIDRFMRLNPTHPNIDYVLYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + + D + ++ + S++V Y NS Y A + +++ Sbjct: 114 LTAMALDDSLLQGFFGVDRSDRDPQHARVAFKDFSQLVRYYPNSLYANDASKRLVYLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA ++ + YY KRG YVA + R Q +L +Y D E A+ + AY + L +EA + Sbjct: 174 LARFDLSVVEYYNKRGAYVAVVNRVQQMLRDYPDTEATRNALKYMEIAYKQMGLDEEANK 233 Query: 249 VVSLIQER 256 V +LI Sbjct: 234 VANLIAAN 241 >gi|271501680|ref|YP_003334706.1| outer membrane assembly lipoprotein YfiO [Dickeya dadantii Ech586] gi|270345235|gb|ACZ78000.1| outer membrane assembly lipoprotein YfiO [Dickeya dadantii Ech586] Length = 243 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 101/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + L G +S+D D R E+Y A L++ NF A Sbjct: 1 MTRMKYLVAAATLSLTLAGCS--NSKDAVPD-----RPPSELYATAQEKLQDGNFKAAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y + + A + + +I P NVDYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKSAELPLAQASIDRFIRLNPTHPNVDYVLYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ D + + + +++++ Y NS Y + + + Sbjct: 114 LTNMAQDDSALQGFFGVDRSDRDPQYARAAFKAFNQLLQGYPNSQYATDTSKRLAFLKER 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + +YY KRG YVA + R + +L +Y D + A+ + AY L L EA + Sbjct: 174 LAKYELSVAQYYTKRGAYVAVVNRVEQMLKDYPDTQATRTALPLMENAYRELRLTAEADK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VARIIAAN 241 >gi|91227646|ref|ZP_01261923.1| hypothetical protein V12G01_13214 [Vibrio alginolyticus 12G01] gi|91188425|gb|EAS74719.1| hypothetical protein V12G01_13214 [Vibrio alginolyticus 12G01] Length = 242 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 17/242 (7%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 T+ +AV L G S++ + V E+Y A + L+ N+ A E Sbjct: 5 TLTGLLAVSLLFGCA---SKEEIVPDVP----PSELYADAQISLQSGNWLSAIEKLEALD 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +PF + + L + Y + ++ P + +D+V Y+ G+S+ Sbjct: 58 SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQ 117 Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 R+ D K ++++RY NSPY + ++ + +N+LA ++ Sbjct: 118 DRNFMHDLFSVDRSDRDPEPVKKAFDDFKKLLQRYPNSPYAEDSQKRMVALKNRLANYDL 177 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +YL+R +VAAI R Q + Y D E A +++ +EAY L L D LI+ Sbjct: 178 ATADFYLRREAWVAAINRSQELQKAYPDTEAARKSLTIQLEAYKQLGLEDAVARTEKLIE 237 Query: 255 ER 256 Sbjct: 238 LN 239 >gi|307543918|ref|YP_003896397.1| lipoprotein [Halomonas elongata DSM 2581] gi|307215942|emb|CBV41212.1| K05807 putative lipoprotein [Halomonas elongata DSM 2581] Length = 269 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 10/221 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + + ++Y++ L++ ++ A +PF A ++ L + Y Sbjct: 28 EEQAPDVAEGQLYQEGRAALEDGRYTTAVNRLEAIDTRYPFGEHAEQAQLELIYAYYETS 87 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMS----------YAQMIRDVPYDQRATKLM 158 ++ A + +I +P+ VDY YY+ G++ ++I D AT+ Sbjct: 88 DWEAARAAASRFIRLHPDHPQVDYAYYMRGLAAWEAGRFSLESLRLIDISKRDLGATRDA 147 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 +V RY NS Y AR + RN LA E+E+ +YL++G Y+AA+ R + V+ Sbjct: 148 YSDFRDLVRRYPNSQYAPDARQRIVYLRNLLAQHELEVADFYLRKGAYLAAVKRGRWVIE 207 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +Y +AE +A+A +VE Y+ L + + A+E + ++ E P Sbjct: 208 HYPEAESTRDALAVMVEGYLGLDMPERAKESLRVLIENAPN 248 Score = 39.7 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 27/67 (40%) Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 G Y A+ R + + Y EHAE+A L+ AY + + AR S +P Sbjct: 50 GRYTTAVNRLEAIDTRYPFGEHAEQAQLELIYAYYETSDWEAARAAASRFIRLHPDHPQV 109 Query: 264 RYVETLV 270 Y + Sbjct: 110 DYAYYMR 116 >gi|28897332|ref|NP_796937.1| hypothetical protein VP0558 [Vibrio parahaemolyticus RIMD 2210633] gi|153839764|ref|ZP_01992431.1| lipoprotein, ComL family [Vibrio parahaemolyticus AQ3810] gi|260364019|ref|ZP_05776750.1| competence lipoprotein ComL [Vibrio parahaemolyticus K5030] gi|260876295|ref|ZP_05888650.1| competence lipoprotein ComL [Vibrio parahaemolyticus AN-5034] gi|260895102|ref|ZP_05903598.1| competence lipoprotein ComL [Vibrio parahaemolyticus Peru-466] gi|260903278|ref|ZP_05911673.1| competence lipoprotein ComL [Vibrio parahaemolyticus AQ4037] gi|28805541|dbj|BAC58821.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|149746717|gb|EDM57705.1| lipoprotein, ComL family [Vibrio parahaemolyticus AQ3810] gi|308088893|gb|EFO38588.1| competence lipoprotein ComL [Vibrio parahaemolyticus Peru-466] gi|308092865|gb|EFO42560.1| competence lipoprotein ComL [Vibrio parahaemolyticus AN-5034] gi|308107944|gb|EFO45484.1| competence lipoprotein ComL [Vibrio parahaemolyticus AQ4037] gi|308115633|gb|EFO53173.1| competence lipoprotein ComL [Vibrio parahaemolyticus K5030] gi|328472094|gb|EGF42971.1| hypothetical protein VP10329_03035 [Vibrio parahaemolyticus 10329] Length = 242 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 102/242 (42%), Gaps = 17/242 (7%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 T+ +AV L G S++ + V E+Y A + L+ N+ A E Sbjct: 5 TLTGLLAVSLLFGCA---SKEEIVPDVP----PSELYADAQVSLQSGNWLSAIEKLEALD 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +PF + + L + Y + ++ P + +D+V Y+ G+S+ Sbjct: 58 SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQ 117 Query: 145 ----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 I D K ++++RY NSPY + A+ + +N+LA ++ Sbjct: 118 DRNFMHDLFSIDRSDRDPEPVKKAFDDFKKLLQRYPNSPYAEDAQKRMVALKNRLANYDL 177 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +YL+R ++AAI R Q + ++ D E A +++ +EAY L L D +LI+ Sbjct: 178 ATADFYLRREAWIAAINRSQELQKSFPDTEAARKSLEIQLEAYKQLQLEDAVARTEALIK 237 Query: 255 ER 256 Sbjct: 238 LN 239 >gi|83719596|ref|YP_442773.1| competence lipoprotein ComL [Burkholderia thailandensis E264] gi|83653421|gb|ABC37484.1| competence lipoprotein ComL [Burkholderia thailandensis E264] Length = 313 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + T ++Y +A L ++ K +YF PF A+++ Sbjct: 66 GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 121 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146 + A+ + + A + +I +P+ +V Y YYL GM + Sbjct: 122 QINVAYCNWKDNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 181 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A + +V+RY S Y A + N LA+ EV YY +RG Y Sbjct: 182 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 241 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 VAAI R QL + Y +A E+A+ ++ +Y L A + ++ +P + Sbjct: 242 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 297 Score = 45.1 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F +P + A + + +A Y G Y A + + I +Y Sbjct: 197 FKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 256 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SYA++ + +L + + +SPYV Sbjct: 257 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 299 >gi|34497648|ref|NP_901863.1| competence lipoprotein ComL [Chromobacterium violaceum ATCC 12472] gi|34103504|gb|AAQ59866.1| competence lipoprotein ComL [Chromobacterium violaceum ATCC 12472] Length = 264 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 61/254 (24%), Positives = 112/254 (44%), Gaps = 15/254 (5%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + + + L G + D T ++Y +A L N+++A + + Sbjct: 5 VVAAMLVMVGLAGCATTETYDE-----TRGWTVEKLYSEAHDELNSGNYTRAVKLYETLE 59 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 FP+ A+++ + A+ Y G+ + A + + +I +P N+DY+YYL G+ Y Sbjct: 60 ARFPYGRYAQQAQMDLAYTHYKDGEPELAIASADRFIKLHPTHPNLDYIYYLKGLVYYND 119 Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 + D RA + + R+ +S Y A+ + + L E+ Sbjct: 120 DSGLLAKWAGQDMSERDPRAAREAFAAFRELTTRFPSSSYAPDAKAKMIRLVDALGGNEM 179 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 + RYY+KRG Y+AA R Q V+ +Y++ ++ EEA+A +V AY L L + ++ Sbjct: 180 HVARYYMKRGAYLAAANRAQGVVKDYANTKYPEEALAIMVAAYDKLQLPQLRDDARRVLA 239 Query: 255 ERYPQGYWARYVET 268 YPQ + T Sbjct: 240 LNYPQSQYLGKSWT 253 >gi|76811535|ref|YP_333729.1| competence lipoprotein ComL [Burkholderia pseudomallei 1710b] gi|76580988|gb|ABA50463.1| competence lipoprotein ComL [Burkholderia pseudomallei 1710b] Length = 313 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + T ++Y +A L ++ K +YF PF A+++ Sbjct: 66 GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 121 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146 + A+ + + A + +I +P+ +V Y YYL GM + Sbjct: 122 QINVAYCNWKDNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 181 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A + +V+RY S Y A + N LA+ EV YY +RG Y Sbjct: 182 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 241 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 VAAI R QL + Y +A E+A+ ++ +Y L A + ++ +P + Sbjct: 242 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 297 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F +P + A + + +A Y G Y A + + I +Y Sbjct: 197 FKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 256 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SYA++ + +L + + +SPYV Sbjct: 257 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 299 >gi|325528652|gb|EGD05738.1| competence lipoprotein ComL [Burkholderia sp. TJI49] Length = 274 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 54/239 (22%), Positives = 95/239 (39%), Gaps = 14/239 (5%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + G + T ++Y +A L ++ K +YF PF A Sbjct: 24 LIAGCHGLPQKQDE----TATWSNNKLYSEAQDALSGGDWGKCAKYFEALQGRDPFGHFA 79 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI-------- 145 +++ + A+ + + A + +I +P+ ++ Y YYL GM + Sbjct: 80 QQAQINVAYCNWKDNETAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFS 139 Query: 146 --RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 D +A + +V+RY S Y A + N LA+ EV YY +R Sbjct: 140 GQDMSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRR 199 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 G YVAAI R QL + +Y A E+A+ ++ +Y L A + ++ +P + Sbjct: 200 GAYVAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPQLAEDTKRVLAGTFPDSPY 258 >gi|86148439|ref|ZP_01066730.1| DNA uptake lipoprotein [Vibrio sp. MED222] gi|218708593|ref|YP_002416214.1| hypothetical lipoprotein [Vibrio splendidus LGP32] gi|85833793|gb|EAQ51960.1| DNA uptake lipoprotein [Vibrio sp. MED222] gi|218321612|emb|CAV17564.1| Hypothetical lipoprotein [Vibrio splendidus LGP32] Length = 242 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 58/243 (23%), Positives = 99/243 (40%), Gaps = 17/243 (6%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LT+ +AV LVG SS ++ D V +Y A L+ ++ A E Sbjct: 4 LTLTGLLAVSLLVGCS--SSEEIVPDVPPSV-----LYSDAQESLQSGSWLSAIEKLEAL 56 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF + + L + Y + ++ P + D+V Y+ G+++ Sbjct: 57 DSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFLRLNPTHEKQDWVLYMRGLTHMA 116 Query: 144 M----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 I D KL R++ER+ SPY + A+ + +N+LA + Sbjct: 117 QDRNFMHDIFNIDRSDRDPEPVKLAFADFKRLLERFPASPYAEDAQKRMFALKNRLAEYD 176 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +YL+R ++AAI R Q + Y D A +++ +EAY L L D LI Sbjct: 177 LATADFYLRREAWIAAINRTQELQKTYPDTIAARKSLDIQLEAYEQLGLEDAVLRTEKLI 236 Query: 254 QER 256 + Sbjct: 237 ELN 239 >gi|187477716|ref|YP_785740.1| lipoprotein [Bordetella avium 197N] gi|115422302|emb|CAJ48826.1| lipoprotein [Bordetella avium 197N] Length = 282 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 54/235 (22%), Positives = 97/235 (41%), Gaps = 14/235 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G ++ T ++Y A + N+ +A + +PF A+++ Sbjct: 33 GCGTSDNKYDK----TAGWSAEQLYADAKQEVAAGNWKEARDRLTAIESRYPFGTYAQQA 88 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ----------MIR 146 L+ A+V + G+ +QA + + + YP DYV YL G+ Sbjct: 89 LIELAYVNWKDGENEQALAAIDRFQQLYPNHPGTDYVLYLKGLINFTPASAFMANLTGQD 148 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D + + + +++R+ +S Y A + N +A EV + RYY RG Y Sbjct: 149 PAERDPKGLRASYDAFNELIKRFPDSKYTPDAEQRMNWLVNAIAMNEVHVARYYYTRGAY 208 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 VAAI R Q VL ++ A EEA+ +V +Y L + + ++ + +P Sbjct: 209 VAAINRAQTVLTDFDGAPATEEALYIMVLSYDKLQMKQLKEDTERVLDKNFPNSK 263 >gi|296135787|ref|YP_003643029.1| outer membrane assembly lipoprotein YfiO [Thiomonas intermedia K12] gi|295795909|gb|ADG30699.1| outer membrane assembly lipoprotein YfiO [Thiomonas intermedia K12] Length = 273 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 113/264 (42%), Gaps = 19/264 (7%) Query: 9 ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68 + ++ W +L L ++ + L G S+D L ++Y +A + Sbjct: 3 VVLYRLWTLRL----LGAAAAVVLLGLAGCASTPSKDETL-----GWSSAKLYAEAKDEM 53 Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 N K + + + +P+ +A+++L+ A+ Y G+ QA + + ++ YP + Sbjct: 54 NSGNTDKGVKLYEKLESRYPYGLLAQQALIEIAYGNYKQGERAQALAAADRFLKLYPNNP 113 Query: 129 NVDYVYYLVGMSYAQMIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 DYV YL G+ + DQ A K + +V R+ S Y A Sbjct: 114 YTDYVLYLKGLINFNTDQGWFSFLSDQKLYERDQAAAKQSFESFKELVTRFPESKYAPDA 173 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 R + N LA E + +Y +RG YVAA R Q + +Y DA + A+A LV+AY Sbjct: 174 RQRMRYIVNSLAEYETHVALFYYRRGAYVAAADRAQRAIEHYQDAPANQLALAILVDAYG 233 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 L + + +++ YPQ + Sbjct: 234 KLGMTQLRDDAERVLKLNYPQSTY 257 >gi|163856157|ref|YP_001630454.1| competence lipoprotein precursor [Bordetella petrii DSM 12804] gi|163259885|emb|CAP42186.1| competence lipoprotein precursor [Bordetella petrii] Length = 303 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 17/250 (6%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + A+ + ++ G + + + T ++Y A +++A E Sbjct: 41 RAAVVLSIALVAAGCSGTDTKYDK-------TAGWSAEQLYADAKAETAAGAWNEARERL 93 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG-- 138 +PF A+++L+ A+V + G+ +QA + + + YP DY+ YL G Sbjct: 94 TAIESRYPFGVYAQQALIDLAYVNWKDGENEQALAAIDRFQQMYPNHPGTDYMLYLKGLI 153 Query: 139 --------MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 MS D + + + +++RY +S Y A VT N +A Sbjct: 154 NFTPASAFMSNLTGQDPAERDPKGLRASYDAFNELIKRYPSSKYTPDAEKRVTWLVNAIA 213 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 EV + RYY +RG YVAA R Q V+ ++ AEEA+ + +Y L + D + Sbjct: 214 MNEVYVARYYYERGAYVAAANRAQTVITDFEGVPAAEEALVIMAASYDKLGMTDLKNDAE 273 Query: 251 SLIQERYPQG 260 +++ YP Sbjct: 274 RVLKTNYPDS 283 >gi|269962552|ref|ZP_06176900.1| putative lipoprotein [Vibrio harveyi 1DA3] gi|269832747|gb|EEZ86858.1| putative lipoprotein [Vibrio harveyi 1DA3] Length = 242 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 100/242 (41%), Gaps = 17/242 (7%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 T+ +AV L G S++ + V E+Y A L+ N+ A E Sbjct: 5 TLTGLLAVSLLFGCA---SKEEIVPDVP----PSELYADAQTSLQSGNWLSAIEKLEALD 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +PF + + L + Y + ++ P + +D+V Y+ G+S+ Sbjct: 58 SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQ 117 Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 R+ D K ++++RY NSPY + ++ + +N+LA ++ Sbjct: 118 DRNFMHDLFNVDRSDRDPEPVKKAFDDFKKLLDRYPNSPYAEDSQKRMVALKNRLADYDL 177 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +YL+R ++AAI R Q + + D E A +++ +EAY L L D LI+ Sbjct: 178 ATADFYLRREAWIAAINRAQELQKAFPDTEAARKSLEIQLEAYKQLKLDDSVARTEELIK 237 Query: 255 ER 256 Sbjct: 238 LN 239 >gi|310766695|gb|ADP11645.1| outer membrane protein assembly complex subunit YfiO [Erwinia sp. Ejp617] Length = 243 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 15/228 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +RDV DS E+Y A L++ NF+ A +PF +++ L Sbjct: 19 GCSGARDVVPDSPP-----SEIYATAQQKLQDGNFNGAITQLEALDNRYPFGPYSQQVQL 73 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDV 148 + Y A + + ++ P N+DYV Y+ G++ + I Sbjct: 74 DLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRS 133 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D + + S+++ Y NS Y AR + +++LA E+ + +Y KR YVA Sbjct: 134 DRDPTHARDAFKDFSQLLRGYPNSQYATDARKRLVFLKDRLAKYELSVAEFYTKRAAYVA 193 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 + R + +L +Y D +A+ + AY L L +A V +I Sbjct: 194 VVNRVEQMLKDYPDTLATRKALPLMENAYRKLQLNAQAERVAKIIAAN 241 >gi|300722271|ref|YP_003711555.1| putative lipoprotein [Xenorhabdus nematophila ATCC 19061] gi|297628772|emb|CBJ89350.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain [Xenorhabdus nematophila ATCC 19061] Length = 243 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 101/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + L G S++D D ++Y L+E N+ A + Sbjct: 1 MIRMKYLVAATTLSLVLSGCS--SNKDAVPDIPP-----SQIYSIGQEKLQEGNYKAAIK 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y + ++ A + + +I P N+DYV+Y+ G Sbjct: 54 QLESLDNRYPFGPYSQQVQLDLIYAYYKSAEFPLAIASIDRFIRLNPTHPNIDYVWYMRG 113 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + I D + + + ++ Y +S Y A + + + Sbjct: 114 LVSQALDDSALQEFFGIDRSDRDPEHARAAFRDFNHLIHDYPSSQYSADAIKRLAFLKER 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + YY KR YVA + R + +L +Y D EA++ + AY L L+ EA + Sbjct: 174 LARYELAVVEYYTKRSAYVAVVNRVEQMLRDYPDTHATREALSYMESAYKELGLIAEADK 233 Query: 249 VVSLIQER 256 V LI Sbjct: 234 VAKLIAAN 241 >gi|148978561|ref|ZP_01815013.1| putative lipoprotein [Vibrionales bacterium SWAT-3] gi|145962350|gb|EDK27631.1| putative lipoprotein [Vibrionales bacterium SWAT-3] Length = 242 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 101/243 (41%), Gaps = 17/243 (6%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LT+ +AV L G S+ ++ D V +Y +A L+ ++ A E Sbjct: 4 LTLAGLLAVSLLAGCS--STEEIVPDVPPSV-----LYSEAQESLQSGSWLSAIEKLEAL 56 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF + + L + Y + ++ P + D+V Y+ G+++ Sbjct: 57 DSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFLRLNPTHEKQDWVLYMRGLTHMA 116 Query: 144 M----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 I D KL R++ER+ SPY + A+ + +N+LA + Sbjct: 117 QDRNFMHDIFNIDRSDRDPEPVKLAFADFKRLLERFPASPYAEDAQKRMFALKNRLADYD 176 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +YL+R ++AAI R Q + Y D A +++ +EAY L L D + +LI Sbjct: 177 LATADFYLRREAWIAAINRTQELQKTYPDTIAARKSLKIQLEAYKQLGLEDAIQRTEALI 236 Query: 254 QER 256 + Sbjct: 237 ELN 239 >gi|310814891|ref|YP_003962855.1| tetratricopeptide TPR_2 repeat protein [Ketogulonicigenium vulgare Y25] gi|308753626|gb|ADO41555.1| tetratricopeptide TPR_2 repeat protein [Ketogulonicigenium vulgare Y25] Length = 289 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 74/233 (31%), Positives = 117/233 (50%) Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 S + D +V++ L E A +F + R +P++ AR+ L Sbjct: 29 CSSNESSVLRQPGALDAYSAEQVFDLGEQQLNENRLDDAAFFFGEIERLYPYSSWARRGL 88 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 +M AF + A Y+ + S + Y+ YP ++ Y YL+ +SY I D+ DQ T Sbjct: 89 IMQAFAYHRARDYENSRSAAQRYVDFYPTDEDAAYAQYLLALSYYDQIDDIGRDQGVTFR 148 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 LQ + R++E Y +S Y A + + LA KE+E+GRYYL RG + AAI RF++V+ Sbjct: 149 ALQELRRVIELYPDSEYATAAVQKFDLAFDHLAGKEMEVGRYYLSRGNFTAAISRFRVVV 208 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 ++ + EA+ RLVEAY+AL L DEAR +++ Y + L+ Sbjct: 209 EDFQTTTYTPEALMRLVEAYMALGLTDEARSAAAILGHNYQSTPFYADAYALL 261 >gi|153834661|ref|ZP_01987328.1| lipoprotein, ComL family [Vibrio harveyi HY01] gi|156973323|ref|YP_001444230.1| hypothetical protein VIBHAR_01004 [Vibrio harveyi ATCC BAA-1116] gi|148868913|gb|EDL67971.1| lipoprotein, ComL family [Vibrio harveyi HY01] gi|156524917|gb|ABU70003.1| hypothetical protein VIBHAR_01004 [Vibrio harveyi ATCC BAA-1116] Length = 242 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 100/242 (41%), Gaps = 17/242 (7%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 T+ +AV L G S++ + V E+Y A L+ N+ A E Sbjct: 5 TLTGLLAVSLLFGCA---SKEEIVPDVP----PSELYADAQTSLQSGNWLSAIEKLEALD 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +PF + + L + Y + ++ P + +D+V Y+ G+S+ Sbjct: 58 SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQ 117 Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 R+ D K +++ERY NSPY + ++ + +N+LA ++ Sbjct: 118 DRNFMHDLFNVDRSDRDPEPVKKAFDDFKKLLERYPNSPYAEDSQKRMVALKNRLANYDL 177 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +YL+R ++AAI R Q + + D E A +++ +EAY L L D LI+ Sbjct: 178 ATADFYLRREAWIAAINRSQELQKAFPDTEAARKSLEIQLEAYKQLKLDDAVARTEELIK 237 Query: 255 ER 256 Sbjct: 238 LN 239 >gi|254785220|ref|YP_003072648.1| outer membrane assembly lipoprotein YfiO [Teredinibacter turnerae T7901] gi|237686542|gb|ACR13806.1| outer membrane assembly lipoprotein YfiO [Teredinibacter turnerae T7901] Length = 301 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 108/250 (43%), Gaps = 16/250 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K I A VG + ++ Y A +L+ N+S A E Sbjct: 1 MIKHPAVIALVTAALLTVGCSSNDDKLAQ-------SSEQVTYNLAQKYLRSSNWSAAIE 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +FPF A ++ L + + +Y A + + ++ +P+ +NVDY +Y+ G Sbjct: 54 ALEVMEENFPFGSYAEQAQLELIYAYFRGNEYDAAIASADRFVRLHPQHRNVDYAFYMRG 113 Query: 139 MS-------YAQMIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 ++ + M+ D K Y +++++RY +SPY A+ + RN L Sbjct: 114 IAAFHNDTAFYSMLPTDITQRDAGTAKDSFDYFAQLIDRYPDSPYALDAQKRMIYLRNML 173 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A E+ + YY KR Y+AA R + V+ N+ + +A + +AY L + D ++ Sbjct: 174 ARYEIHVANYYFKRSAYLAAANRGRYVVENFEGTPAVPDGLAVMAQAYQMLGMDDYSKSA 233 Query: 250 VSLIQERYPQ 259 ++ + +P Sbjct: 234 EKVLVKNFPN 243 Score = 35.5 bits (81), Expect = 9.2, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 4/88 (4%) Query: 187 NQLAAKEVEI----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 ++LA ++ + YL+ + AAI +++ N+ +AE+A L+ AY Sbjct: 25 DKLAQSSEQVTYNLAQKYLRSSNWSAAIEALEVMEENFPFGSYAEQAQLELIYAYFRGNE 84 Query: 243 MDEAREVVSLIQERYPQGYWARYVETLV 270 D A +PQ Y + Sbjct: 85 YDAAIASADRFVRLHPQHRNVDYAFYMR 112 >gi|67459480|ref|YP_247104.1| hypothetical protein RF_1088 [Rickettsia felis URRWXCal2] gi|67005013|gb|AAY61939.1| unknown [Rickettsia felis URRWXCal2] Length = 251 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 77/254 (30%), Positives = 134/254 (52%), Gaps = 8/254 (3%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 +L K L+I F I + +++S D+ + T +Y + V L+++ + KA Sbjct: 2 KLTKL-LSILFIIGLSLSGCKSKKNSDDIVVPIPT-------LYNEGVSLLEKKKYKKAA 53 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E F + P + ++ LM + + A +Y++A + + +I +P + ++ Y YYL Sbjct: 54 EEFGRVFYQHPGNEMTPQAELMQGYSLFLAAQYEEAVDVLDMFINLHPANVDIAYAYYLK 113 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 +SY +I DV +DQ T L ++ ++ N+ Y + + + + LA KE+ +G Sbjct: 114 ALSYYMLISDVNHDQSRTFLAKDSFEDVIGKFPNTKYAIDSSLKIDLVNDHLAGKEMMVG 173 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 R+YLK+ +AAI RF+ V+ NY H+ EA+ RLVE+Y+ L L DEA++ S++ Y Sbjct: 174 RFYLKKKNPMAAINRFEEVIDNYQTTSHSVEALYRLVESYMMLGLADEAKKYASVLGYNY 233 Query: 258 PQGYWARYVETLVK 271 P W Y LVK Sbjct: 234 PDSQWYSYAYKLVK 247 >gi|320539056|ref|ZP_08038730.1| putative outer membrane protein assembly lipoprotein [Serratia symbiotica str. Tucson] gi|320030896|gb|EFW12901.1| putative outer membrane protein assembly lipoprotein [Serratia symbiotica str. Tucson] Length = 241 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 60/248 (24%), Positives = 101/248 (40%), Gaps = 19/248 (7%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + L G S+D D+ E+Y A +++ NF A Sbjct: 1 MTRMKYLVAVATLSLVLAGCST--SKDAVPDNPP-----SEIYATAQQKMQDGNFKGAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y + A + + +I P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLYLIYAYYKSADLPLAQASIDRFIRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + I D + + S+ ER NS YV A + +++ Sbjct: 114 LADMALDDSTLQGFFGIDRSDRDPLHARAAFRDFSQ--ERSPNSQYVTDANKRLVYLKDR 171 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + YY KRG YVAAI R + +L Y D + +A+ + AY L L EA + Sbjct: 172 LAKYELSVVEYYTKRGAYVAAINRVEQMLREYPDTKATRDALPLMERAYKRLQLNSEAEK 231 Query: 249 VVSLIQER 256 V +I Sbjct: 232 VAKVIAAN 239 >gi|291618566|ref|YP_003521308.1| YfiO [Pantoea ananatis LMG 20103] gi|291153596|gb|ADD78180.1| YfiO [Pantoea ananatis LMG 20103] gi|327394947|dbj|BAK12369.1| UPF0169 lipoprotein YfiO precursor [Pantoea ananatis AJ13355] Length = 243 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 100/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + LVG S D D+ E+Y A L++ NF A + Sbjct: 1 MTRMKYLVAAATLSLALVGCS--GSNDAVPDNPP-----SEIYATAQQKLQDGNFKAAIK 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + ++ P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPMAQAAISRFMRLNPTHPNIDYVIYMKG 113 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + I D + + ++++ Y NS Y A +++ Sbjct: 114 LTDMALDDSALQGFFGIDRSDRDPTHARDAFRDFAQLLRSYPNSQYAADAYKRQVYLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L+ E+ + ++Y KRG YVA + R + ++ +Y D + +A+ + AY L L EA + Sbjct: 174 LSKYELSVAQFYTKRGAYVAVVNRVEGMMRDYPDTQATHDALPLMENAYRQLQLNAEADK 233 Query: 249 VVSLIQER 256 V +I Sbjct: 234 VAKIIAAN 241 >gi|294339950|emb|CAZ88313.1| Competence lipoprotein comL precursor [Thiomonas sp. 3As] Length = 273 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 113/264 (42%), Gaps = 19/264 (7%) Query: 9 ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68 + ++ W +L L ++ + L G S+D L ++Y +A + Sbjct: 3 VALYRLWTLRL----LGAAAAVVLLGLAGCASTPSKDETL-----GWSSAKLYAEAKDEM 53 Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 N K + + + +P+ +A+++L+ A+ Y G+ QA + + ++ YP + Sbjct: 54 NSGNTDKGVKLYEKLESRYPYGLLAQQALIEIAYGNYKQGERAQALAAADRFLKLYPNNP 113 Query: 129 NVDYVYYLVGMSYAQMIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 DYV YL G+ + DQ A K + +V R+ S Y A Sbjct: 114 YTDYVLYLKGLINFNTNQGWFSFLSDQKLYERDQAAAKQSFESFKELVTRFPESKYAPDA 173 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 R + N LA E + +Y +RG YVAA R Q + +Y DA + A+A LV+AY Sbjct: 174 RQRMRYIVNSLAEYETHVALFYYRRGAYVAAADRAQRAIEHYQDAPANQLALAILVDAYG 233 Query: 239 ALALMDEAREVVSLIQERYPQGYW 262 L + + +++ YPQ + Sbjct: 234 KLGMTQLRDDAERVLKLNYPQSTY 257 >gi|186475731|ref|YP_001857201.1| putative competence lipoprotein, ComL [Burkholderia phymatum STM815] gi|184192190|gb|ACC70155.1| putative competence lipoprotein, ComL [Burkholderia phymatum STM815] Length = 285 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 61/272 (22%), Positives = 107/272 (39%), Gaps = 13/272 (4%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 M A+ + + A++L + A S+A LV T ++ Sbjct: 1 MRALNIITQTVRKTVAHKLARKAALYGASVAAATLVAACHGLPEKTDE---TATWTNNKL 57 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A L +F K +YF PF A+++ + A+ + + A + Sbjct: 58 YTEAQDALSGGDFGKCAKYFEALEGRDPFGHFAQQAQINVAYCNWKDSETDAADQAVNRF 117 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATKLMLQYMSRIVERYT 170 I +P+ ++ Y YYL GM + D ++ + +V++Y Sbjct: 118 IQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLRESYDAFKVVVDKYP 177 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 S Y A + N LA+ EV YY +RG YVAAI R QL + Y +A E+A+ Sbjct: 178 QSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYKNAPAIEDAL 237 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 ++ +Y L A + ++ +P + Sbjct: 238 HIMMLSYQKLDQPQLAEDTKRVLAGTFPDSPY 269 >gi|299066638|emb|CBJ37831.1| putative lipoprotein, ComL family, tetratricopeptide repeats (TPR) domain [Ralstonia solanacearum CMR15] Length = 244 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 10/224 (4%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T ++Y +A L ++SKA +Y+ + +PF A+++ + +A+ Y G+ Sbjct: 8 TAGWSANKLYSEAKDALDGGDYSKAVKYYEKLESRYPFGPFAQQAQIETAYANYKDGETA 67 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQY 161 A + + +I +P +VDY YYL G+ D +A + Sbjct: 68 AALAAVDRFIQLHPNHPSVDYAYYLKGLINFNDNLGWLGRFSNQDLSERDPKAARAAYDA 127 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 ++ R+ NS Y A + N +A EV+ RYY +RG Y+AA R Q + +Y Sbjct: 128 FKTLLARFPNSKYAPDAAQRMQYIVNAMAEHEVQAARYYYRRGAYLAATNRAQEAIKDYD 187 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 A EE + ++++Y AL + D + +I++ YP + Y Sbjct: 188 RAPAVEEGLYIMMKSYEALGMKDLRDDTERIIKQNYPNSDYLLY 231 >gi|293392745|ref|ZP_06637063.1| competence lipoprotein ComL [Serratia odorifera DSM 4582] gi|291424604|gb|EFE97815.1| competence lipoprotein ComL [Serratia odorifera DSM 4582] Length = 243 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 15/228 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 SS+D D+ E+Y A L++ NF A +PF +++ L Sbjct: 19 GCSSSKDAVPDNPP-----SEIYANAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQVQL 73 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148 + Y + A + + ++ P N+DYV Y+ G++ + Sbjct: 74 DLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVMYMRGLTDMALDDSALQGFFGVDRS 133 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D + + + S+++++Y +S Y A+ + +++L+ E+ + YY KRG YVA Sbjct: 134 DRDPQHARAAFRDFSQLIQQYPSSQYTPDAQKRLVYLKDRLSKYELSVAEYYTKRGAYVA 193 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 + R + ++ Y D + +A+ + AY L L +A +V +I Sbjct: 194 VVNRVEQMMREYPDTKATRDALPLMENAYKQLQLNGQADKVAKIIAAN 241 >gi|255318858|ref|ZP_05360084.1| DNA uptake lipoprotein [Acinetobacter radioresistens SK82] gi|262378884|ref|ZP_06072041.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|255304114|gb|EET83305.1| DNA uptake lipoprotein [Acinetobacter radioresistens SK82] gi|262300169|gb|EEY88081.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 343 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 63/253 (24%), Positives = 112/253 (44%), Gaps = 15/253 (5%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y++ AL++ + A LVG ++V ++ + KA L+ +S A Sbjct: 6 YKVTMLALSLGIASA---LVGCSSNPKKEVVDTGP--QSSEQVYFNKAERALERGQYSDA 60 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + FP A+++ L +V++ Y+ A +L E +I P+ NVDY YY+ Sbjct: 61 AKQLEALDTYFPTGQYAQQAQLELLYVKFQQKDYEGAIALAERFIRLNPQHPNVDYAYYV 120 Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 G++ + ++ D K+ Q + RY +S Y A + Sbjct: 121 RGVANMEQNYDGLLRYTSLQQSHRDVSYLKVAYQNFVDFIRRYPSSQYAVDAAQRMKFIG 180 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +LA E+ + RY LKR +VAA+ R Q V+ +Y EA+A + AY L + Sbjct: 181 QELAENEMNVARYNLKRKAWVAALERAQWVVEHYPQTPQIPEALATMAYAYDKLGDQASS 240 Query: 247 REVVSLIQERYPQ 259 ++ V +++ YP+ Sbjct: 241 QQYVEVLKLNYPE 253 >gi|325121170|gb|ADY80693.1| putative competence protein (ComL) [Acinetobacter calcoaceticus PHEA-2] Length = 387 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 108/253 (42%), Gaps = 14/253 (5%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y++ AL++ + A VG S+ +D+ ++ +EKA L + A Sbjct: 6 YKITVLALSLGVASAF---VGCSSNPSKKEVVDTGPQ-SSEQAYFEKAQKSLDRGQYLDA 61 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + +P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ Sbjct: 62 TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYV 121 Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 ++ + ++ D K+ Q ++ R+ +S Y A + Sbjct: 122 RAVANMEQNYDSLMRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIG 181 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +LA E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L + Sbjct: 182 QELAENEMTAARFNVKRKAWIAAAERSQWVIEHYPQTPQIPEALATLAYSYDKLGDKATS 241 Query: 247 REVVSLIQERYPQ 259 ++ + +++ YP Sbjct: 242 QQYIEVLKLNYPS 254 >gi|298368342|ref|ZP_06979660.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str. F0314] gi|298282345|gb|EFI23832.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str. F0314] Length = 267 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 11/242 (4%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 + + D +T ++Y +A L N+++A + + FP A++S Sbjct: 16 ACASKGTVDKDA-QITQDWNVEKLYAEAQDELNSNNYTRAIKLYELLESRFPNGRYAQQS 74 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-------- 148 L +A+ Y + ++A + E + +P+ N+DY YL G+ + Sbjct: 75 QLDTAYAYYKDDEPEKALAAIERFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQD 134 Query: 149 --PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A + Q S++V+ Y NS Y A +T + L E+ I RYY+KRG Y Sbjct: 135 WSDRDPKANRDAYQAFSQLVQLYPNSKYAPDATERMTKLVDALGGNEIAIARYYMKRGAY 194 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 +AAI R Q ++ Y + + EE++A + AY L A + ++ +P + + Sbjct: 195 LAAINRAQKIVEQYQNTRYVEESLAMMELAYKKLGKPQLAADSRRILAGNFPASPYLQKP 254 Query: 267 ET 268 Sbjct: 255 WR 256 >gi|120611899|ref|YP_971577.1| hypothetical protein Aave_3241 [Acidovorax citrulli AAC00-1] gi|120590363|gb|ABM33803.1| putative transmembrane protein [Acidovorax citrulli AAC00-1] Length = 265 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 17/257 (6%) Query: 19 LYKFALTIF-FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + +F+L + +A L G + T +Y +A L ++ KA Sbjct: 1 MPRFSLPLLTILLAAGVLAGCSST------PEDKTAGWSPNRIYSEARDELNSNSYDKAV 54 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 F + +A+++ L A+ QY G+ QA + + ++ +P S DY YL Sbjct: 55 PLFEKLEGRAAGTPLAQQAQLEKAYAQYKGGEKAQAIATLDRFMKLHPASPAYDYALYLK 114 Query: 138 GMSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+ DQ+A K + + R+ +S Y + A+ +T N Sbjct: 115 GLVNFNDNLGLFSWLSRQDLSERDQKAAKDSFESFRELTTRFPDSRYARDAQQRMTYIVN 174 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 LA EV + RYY +RG YVAAI R Q+ LA+Y D EEA+ L+++Y AL + Sbjct: 175 SLAQYEVHVARYYYQRGAYVAAINRAQIALADYKDVPALEEALYILIKSYDALGMTQLRD 234 Query: 248 EVVSLIQERYPQGYWAR 264 + ++ YPQ + R Sbjct: 235 DAQRVMAASYPQSEYMR 251 >gi|90022197|ref|YP_528024.1| Acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase [Saccharophagus degradans 2-40] gi|89951797|gb|ABD81812.1| competence lipoprotein ComL, putative [Saccharophagus degradans 2-40] Length = 301 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 105/250 (42%), Gaps = 16/250 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + KF L + L + + ++++Y++A L ++ A E Sbjct: 1 MRKFGLLGGLITIILVLSACASEKDKIA-------AGSEKDIYQRAQYALNHSSWDAAVE 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 Y +PF A +S L F Y + +++ A + + +I +P+ ++VDY YY+ G Sbjct: 54 YLQLLEEHYPFGVYAEQSQLELIFAYYQSDEHEAAIASADRFIRLHPQHRSVDYAYYMRG 113 Query: 139 MSYAQMIRDVP---------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 ++ + D + Y ++ + RY +SPY A+ + RN + Sbjct: 114 VASFSNDTAITSFLPTDVTQRDIGTAREAFNYFNQFLNRYPDSPYALDAQKRMIYLRNTM 173 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A E+ + YY KR Y+AA R + V+ N + +A + Y L + + A + Sbjct: 174 ARSEIHVANYYFKREAYLAAANRGRYVVENMQGTPAVPDGLAVMAMGYHMLNMPELANDA 233 Query: 250 VSLIQERYPQ 259 V ++ YP Sbjct: 234 VKVLIANYPN 243 >gi|114766759|ref|ZP_01445696.1| competence lipoprotein ComL, putative [Pelagibaca bermudensis HTCC2601] gi|114541016|gb|EAU44073.1| competence lipoprotein ComL, putative [Roseovarius sp. HTCC2601] Length = 275 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 73/246 (29%), Positives = 130/246 (52%), Gaps = 1/246 (0%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 I + + L G Q ++ + +++YE+ L ++ +A YF++ Sbjct: 2 IGVAFSAILLAGCTAQEREGYARGNIPLETFSAQQIYERGEYELDRRDGEQAAYYFSEVE 61 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 R +P++ ++++L+M A+ ++ Y+ + S + YI YP ++ Y YL+ +SY Sbjct: 62 RLYPYSEWSKRALIMQAYAFHTEKDYENSRSSAQRYIDFYPTDEDAAYAQYLLALSYYDQ 121 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 I +V DQ T LQ + ++ERY S Y + + + + LA KE+EIGRYYL+ Sbjct: 122 IEEVGRDQGLTFQALQALRTVIERYPESEYARSSILKFDLAFDHLAGKEMEIGRYYLRDK 181 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 + AAI RF++V+ ++ H EA+ RLVEAY++L L+ EA+ +++ Y W R Sbjct: 182 HFGAAISRFRVVVEDFQTTTHTPEALHRLVEAYLSLGLVQEAQSAGAILGYNYQGSEWYR 241 Query: 265 YVETLV 270 TL+ Sbjct: 242 DSYTLL 247 >gi|85058560|ref|YP_454262.1| outer membrane protein assembly complex subunit YfiO [Sodalis glossinidius str. 'morsitans'] gi|84779080|dbj|BAE73857.1| putative lipoprotein [Sodalis glossinidius str. 'morsitans'] Length = 243 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 101/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + L G S++D D+ E+Y A L++ N+ A + Sbjct: 1 MMRMKYLVAAATLCLVLAGCS--SNKDAVPDNPP-----SEIYASAQQKLQDGNYKGAIK 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF A++ L + Y + A + + ++ P NVDYV Y+ G Sbjct: 54 ELEALDNRYPFGPYAQQVQLDLIYAYYKSADLPLAQASIDRFLRLNPTHPNVDYVLYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + + + + ++++ Y NS Y A + +++ Sbjct: 114 LTDMALDDSALQGFFGVDRSDRNPEHARAAFRDFTQLIRGYPNSQYAMDATKRLVYLKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + YY KRG YVA R + +L ++ D + +A+ + +AY L L +A + Sbjct: 174 LAKHELSVVEYYDKRGAYVAVANRVEQMLRDFPDTQATRQALPYMEKAYRELQLSGQADK 233 Query: 249 VVSLIQER 256 + + Sbjct: 234 MSKIRAAN 241 >gi|304414307|ref|ZP_07395675.1| outer membrane protein assembly complex [Candidatus Regiella insecticola LSR1] gi|304283521|gb|EFL91917.1| outer membrane protein assembly complex [Candidatus Regiella insecticola LSR1] Length = 246 Score = 254 bits (650), Expect = 8e-66, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + +I L+G +S DV DS E+Y A L+ NF A Sbjct: 1 MKRIKYLVATAIWSLLLMGCS--NSNDVVPDSPP-----TELYTDAQQKLQSGNFQGAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF+ + + + Y + A + ++ P N+DY+ YL G Sbjct: 54 QLEALDSRYPFSAYSSQVQFDLIYAYYKSANLSMALVSIDRFMRLNPTHPNIDYMLYLRG 113 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + I D + ++++E Y +S Y ++ + +N+ Sbjct: 114 LTDMALDDSALQGLFGIDRSDRDPIYVLAAFRDFTQLIENYPDSQYATDSQKRLLYLKNR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E++I RYY KRG +VA + R + ++ NY D + +A+ + AY L L ++A + Sbjct: 174 LAKHELDIARYYTKRGAHVAVVNRIEQMMQNYPDTQATRDALPLMKNAYERLQLNEQADQ 233 Query: 249 VVSLIQER 256 V LI Sbjct: 234 VAKLIAAN 241 >gi|161524653|ref|YP_001579665.1| competence lipoprotein ComL [Burkholderia multivorans ATCC 17616] gi|189350590|ref|YP_001946218.1| putative lipoprotein [Burkholderia multivorans ATCC 17616] gi|221198060|ref|ZP_03571106.1| putative competence lipoprotein ComL [Burkholderia multivorans CGD2M] gi|221204382|ref|ZP_03577399.1| putative competence lipoprotein ComL [Burkholderia multivorans CGD2] gi|221212789|ref|ZP_03585765.1| putative competence lipoprotein ComL [Burkholderia multivorans CGD1] gi|160342082|gb|ABX15168.1| competence lipoprotein ComL [Burkholderia multivorans ATCC 17616] gi|189334612|dbj|BAG43682.1| putative lipoprotein [Burkholderia multivorans ATCC 17616] gi|221167002|gb|EED99472.1| putative competence lipoprotein ComL [Burkholderia multivorans CGD1] gi|221175239|gb|EEE07669.1| putative competence lipoprotein ComL [Burkholderia multivorans CGD2] gi|221181992|gb|EEE14393.1| putative competence lipoprotein ComL [Burkholderia multivorans CGD2M] Length = 274 Score = 254 bits (650), Expect = 8e-66, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + T ++Y +A L ++ K +YF PF A+++ Sbjct: 27 GCHGLPQKQDE----TATWSNNKLYSEAQDALSGGDWGKCAKYFEALQGRDPFGHFAQQA 82 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146 + A+ + + A + +I +P+ ++ Y YYL GM + Sbjct: 83 QINVAYCNWKDNEPAAADQAVDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQD 142 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A + +V+RY S Y A + N LA+ EV YY +RG Y Sbjct: 143 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 VAAI R QL + +Y A E+A+ +V +Y L A + ++ +P + Sbjct: 203 VAAINRAQLAIKDYKGAPAIEDALHIMVLSYQKLNQPQLAEDTKRVLAGTFPDSPY 258 >gi|107029026|ref|YP_626121.1| DNA uptake lipoprotein-like [Burkholderia cenocepacia AU 1054] gi|116689815|ref|YP_835438.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia HI2424] gi|170733154|ref|YP_001765101.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia MC0-3] gi|105898190|gb|ABF81148.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia AU 1054] gi|116647904|gb|ABK08545.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia HI2424] gi|169816396|gb|ACA90979.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia MC0-3] Length = 274 Score = 254 bits (650), Expect = 8e-66, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 14/239 (5%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + G + T ++Y +A L ++ K +YF PF A Sbjct: 24 LIAGCHGLPQKQDE----TATWSNNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFA 79 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI-------- 145 +++ + A+ + + A + +I +P+ ++ Y YYL GM + Sbjct: 80 QQAQINVAYCNWKDNEAAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFS 139 Query: 146 --RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 D +A + +V+R+ S Y A + N LA+ EV YY +R Sbjct: 140 GQDMSERDPQALRESYDAFKVVVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRR 199 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 G YVAAI R QL + +Y A E+A+ ++ +Y L + A + ++ +P + Sbjct: 200 GAYVAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPELAEDTKRVLAGTFPDSPY 258 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F FP + A + + +A Y G Y A + + I Y Sbjct: 158 FKVVVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYK 217 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SY ++ + +L + + +SPYV Sbjct: 218 GAPAIEDALHIMILSYGKLNQ--------PELAEDTKRVLAGTFPDSPYVT 260 >gi|56696099|ref|YP_166453.1| competence lipoprotein ComL, putative [Ruegeria pomeroyi DSS-3] gi|56677836|gb|AAV94502.1| competence lipoprotein ComL, putative [Ruegeria pomeroyi DSS-3] Length = 284 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 76/238 (31%), Positives = 124/238 (52%), Gaps = 4/238 (1%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 C G+ + R LD T +++E+ L + A YF++ R +P++ Sbjct: 23 CGGGGFRTAADRSQNLDGYT----PEQIFERGEYELSAKRTEDAAYYFSEVERLYPYSNW 78 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A+++L+M AF +S Y ++ + + YI YP ++ Y YL+ +SY I +V DQ Sbjct: 79 AKRALIMQAFAYHSGKDYPESRAAAQRYIDFYPADEDAAYAQYLLALSYYDQIDEVGRDQ 138 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 T LQ + ++E Y +S Y A + + LAAKE+EIGRYYL+R + AAI R Sbjct: 139 GLTFQALQALRTVIEVYPDSEYATSAILKFDLAFDHLAAKEMEIGRYYLRRQHFSAAINR 198 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 F++V+ ++ H EA+ RLVEAY++L L EA+ +++ Y W L+ Sbjct: 199 FRVVVEDFQTTTHTAEALHRLVEAYLSLGLEAEAQTAGAILGHNYQSSEWYEASYKLL 256 >gi|78066564|ref|YP_369333.1| DNA uptake lipoprotein-like [Burkholderia sp. 383] gi|77967309|gb|ABB08689.1| DNA uptake lipoprotein-like protein [Burkholderia sp. 383] Length = 274 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 95/239 (39%), Gaps = 14/239 (5%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + G + T ++Y +A L ++ K +YF PF A Sbjct: 24 LIAGCHGLPQKQDE----TATWSNNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFA 79 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI-------- 145 +++ + A+ + + A + +I +P+ ++ Y YYL GM + Sbjct: 80 QQAQINVAYCNWKDNEAAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFS 139 Query: 146 --RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 D +A + +V+R+ S Y A + N LA+ EV YY +R Sbjct: 140 GQDMSERDPQALRESYDAFKVVVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRR 199 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 G YVAAI R QL + +Y A E+A+ ++ +Y L A + ++ +P + Sbjct: 200 GAYVAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPQLAEDTKRVLAGTFPDSPY 258 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F FP + A + + +A Y G Y A + + I Y Sbjct: 158 FKVVVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYK 217 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SY ++ + +L + + +SPYV Sbjct: 218 GAPAIEDALHIMILSYGKLNQ--------PQLAEDTKRVLAGTFPDSPYVT 260 >gi|254490941|ref|ZP_05104123.1| outer membrane assembly lipoprotein YfiO [Methylophaga thiooxidans DMS010] gi|224463850|gb|EEF80117.1| outer membrane assembly lipoprotein YfiO [Methylophaga thiooxydans DMS010] Length = 261 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 105/233 (45%), Gaps = 13/233 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G ++ D + VY +A L ++ A Y+ Q FPF A+++ Sbjct: 19 GCSFFKKEEIKAD---ESWTVERVYSEANAALTLGDYETAITYYEQLEARFPFGEYAQQA 75 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146 LL SA+ Y + A + + ++ YP + N+DY YL G++ Sbjct: 76 LLESAYAHYKNDDPETAIATLDRFMRVYPLNPNIDYAIYLRGLTSFHRDIGFFEKYIPRD 135 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 + D A + L+ +V R+ S Y + + + RN+LA EV + YY++RG Y Sbjct: 136 ESQRDPGAAEDALRDFKTLVTRFPQSRYAEDSTQRIVYLRNRLAQHEVNVANYYMRRGSY 195 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +AA R + VL NY EA+ + +AY L + D +++ + +++ YP Sbjct: 196 IAAANRGKYVLENYPRTPSMPEALVVMAKAYKVLDMHDLSQDALRVLELNYPG 248 >gi|212712903|ref|ZP_03321031.1| hypothetical protein PROVALCAL_04000 [Providencia alcalifaciens DSM 30120] gi|212684448|gb|EEB43976.1| hypothetical protein PROVALCAL_04000 [Providencia alcalifaciens DSM 30120] Length = 239 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 10/218 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + V+ E+Y L++ N++ A + F +PF A++ L + Y + Sbjct: 21 NEVSPDSSPAEIYSTGQQKLQDGNYNAAIKQFEALDNRYPFGPYAQQVQLDLIYAYYKSA 80 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158 + A + + ++ P N+DYV Y+ G++ + I D + + Sbjct: 81 ELPMAIASIDRFMRLNPTHPNIDYVLYMRGLTAMALDDSMLQGFFGIDRSDRDPQHALVA 140 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + +S++V Y NSPY A + +++LA ++ + YY KRG YVA + R Q +L Sbjct: 141 FKDLSQLVRYYPNSPYSNDASKRLVYLKDRLAKFDLSVVEYYNKRGAYVAVVNRVQQMLR 200 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +Y D E +A+ + AY + L EA +V S+I Sbjct: 201 DYPDTEATRQALTYMEIAYKEMGLDKEANKVGSIIAAN 238 >gi|261346209|ref|ZP_05973853.1| competence lipoprotein ComL [Providencia rustigianii DSM 4541] gi|282565515|gb|EFB71050.1| competence lipoprotein ComL [Providencia rustigianii DSM 4541] Length = 242 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 10/218 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + V+ E+Y L++ N+S A + F +PF A++ L + Y + Sbjct: 24 NEVSPDSSPAEIYSTGQQKLQDGNYSAAIKQFEALDNRYPFGPYAQQVQLDLIYAYYKSA 83 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158 + A + + ++ P N+DYV Y+ G++ + I D + + Sbjct: 84 ELPMAIATIDRFMRLNPTHPNIDYVLYMRGLTAMALDDSMLQGFFGIDRSDRDPQHALVA 143 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + +S++V Y NS Y A + +++LA ++ + YY KRG YVA + R Q +L Sbjct: 144 FKDLSQLVRYYPNSQYSNDASKRLVYLKDRLAKFDLSVVEYYNKRGAYVAVVNRVQQMLR 203 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +Y D E +A+ + AY + L +EA +V S++ Sbjct: 204 DYPDTEATRKALTYMEIAYKEMGLDNEANKVASILAAN 241 >gi|167950144|ref|ZP_02537218.1| competence lipoprotein ComL [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 271 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 10/222 (4%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T + Y +A + + ++ A EY+ +PF A ++ L + Y + Sbjct: 29 TKGWSASKFYSEAKSAMMDGDYDGAIEYYEGLEARYPFGRYATQAQLDIIYAHYKNSEPD 88 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQY 161 A + E +I +P++ VDY YYL G++ I D A Sbjct: 89 SAIAAAERFIRLHPQNSYVDYAYYLKGLANFNRNHSITTRFIPIDSSQRDAGAALTSFSD 148 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + +V R+ S Y AR + RN LA ++ + RYY++RG Y+AA R V+AN+ Sbjct: 149 FAELVRRFPESKYASDARQRMIYLRNNLAKYQIHVARYYMRRGAYLAAANRANRVVANFQ 208 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 +EA+ +V+AY L L + A + ++ G +A Sbjct: 209 RTSVVDEALQIMVDAYTRLGLKNLAADAERVLALNRQNGLFA 250 >gi|319408816|emb|CBI82473.1| competence lipoprotein precursor [Bartonella schoenbuchensis R1] Length = 292 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 84/217 (38%), Positives = 125/217 (57%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 +Y +A+ L F +A + F+ + + + RKSL+M AFV Y KY A Sbjct: 50 DPPDVLYNQALTNLDLGRFDEALKKFSIIEKQYAYTEWGRKSLVMGAFVSYRLAKYDDAI 109 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 S+ + YIT YP + + Y YY+VG+S IRDV DQR TK + M ++ERY NS Y Sbjct: 110 SMAQRYITLYPNASDSAYAYYIVGLSSFHQIRDVTRDQRDTKRAIAAMQLLIERYPNSEY 169 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 VK A+ + GR QLA KE+++GRYY + +Y+AA RF+ V+ YSD EEA+ RL Sbjct: 170 VKDAKDKIRFGREQLAGKEMQVGRYYEEGRQYLAASRRFRTVVEEYSDTNQIEEALFRLT 229 Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 E +AL L+ EA+ +++ YP+ W ++ L++ Sbjct: 230 EVNLALGLITEAQTAAAVLGRNYPESKWYKFSYDLLQ 266 >gi|192359694|ref|YP_001983660.1| competence protein ComL [Cellvibrio japonicus Ueda107] gi|190685859|gb|ACE83537.1| competence protein ComL [Cellvibrio japonicus Ueda107] Length = 327 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 10/221 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + V + ++Y+ A L + A + +FPF A ++ L + Y +G Sbjct: 48 EKEPKVTTEADLYQAAERQLNNSQWQTAIKNLQTLEENFPFGTYAEQAQLELIYAYYMSG 107 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP----------YDQRATKLM 158 + A + +I +P+ +NVDY YY++GMS + + D A + Sbjct: 108 EPDAAIATANRFIRLHPQHRNVDYAYYMLGMSSFTKDKGMFERVLPVDITRRDPGAARES 167 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 L ++++ RY +S Y A+ + RN LA E+ + YY KRG Y+AA+ R + VL Sbjct: 168 LANFTQLLNRYPDSAYAADAKKRMLFLRNLLARYEIHVANYYFKRGAYIAAVGRGRYVLE 227 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 N+ +A+A +V+ Y +++ +A E++ +++ YP Sbjct: 228 NFPKTPAIPDALAVMVQGYRLMSMSTQADEMLEILRTNYPN 268 Score = 35.9 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 27/70 (38%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L ++ AI Q + N+ +AE+A L+ AY D A + +PQ Sbjct: 67 LNNSQWQTAIKNLQTLEENFPFGTYAEQAQLELIYAYYMSGEPDAAIATANRFIRLHPQH 126 Query: 261 YWARYVETLV 270 Y ++ Sbjct: 127 RNVDYAYYML 136 >gi|27363949|ref|NP_759477.1| putative component of the lipoprotein assembly complex [Vibrio vulnificus CMCP6] gi|37678896|ref|NP_933505.1| putative lipoprotein [Vibrio vulnificus YJ016] gi|27360066|gb|AAO09004.1| Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Vibrio vulnificus CMCP6] gi|37197637|dbj|BAC93476.1| putative lipoprotein [Vibrio vulnificus YJ016] Length = 241 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 57/242 (23%), Positives = 97/242 (40%), Gaps = 17/242 (7%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 T+ +AV L G SS + D E+Y +A L+ N+ A E Sbjct: 5 TLAGLLAVSVLFGCS--SSEQIVPDVPP-----AELYAEAQTSLQGGNWLTAIEKLEALD 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +PF + + L + Y + + P + +D+V Y+ G+++ Sbjct: 58 SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFTRLNPTHEKMDWVLYMRGLTHMAQ 117 Query: 145 ----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 I D K +++ERY NSPY + ++ + +N+LA ++ Sbjct: 118 DRNFMHDLFNIDRSDRDPEPVKQAFDDFKKLLERYPNSPYAEDSQKRMFALKNRLAEYDL 177 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 YYL+R ++AAI R Q + Y D A +++ +EAY L L D LI+ Sbjct: 178 ATADYYLRREAWIAAINRSQELQKTYPDTIAARKSLKIQLEAYKQLGLQDAIARTEELIR 237 Query: 255 ER 256 Sbjct: 238 LN 239 >gi|167587071|ref|ZP_02379459.1| DNA uptake lipoprotein-like [Burkholderia ubonensis Bu] Length = 274 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 54/239 (22%), Positives = 94/239 (39%), Gaps = 14/239 (5%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + G + T ++Y +A L ++ K +YF PF A Sbjct: 24 LIAGCHGLPQKQDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFA 79 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI-------- 145 +++ + A+ + + A + +I +P+ ++ Y YYL GM + Sbjct: 80 QQAQINVAYCNWKDNEPAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFS 139 Query: 146 --RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 D +A + +V+RY S Y A + N LA+ EV YY +R Sbjct: 140 GQDMSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRR 199 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 G YVAAI R QL + Y A E+A+ ++ +Y L A + ++ +P + Sbjct: 200 GAYVAAINRAQLAIKEYKGAPAIEDALHIMILSYDKLQQPQLAEDTKRVLAGTFPDSPY 258 Score = 42.0 bits (98), Expect = 0.079, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 39/111 (35%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F +P + A + + +A Y G Y A + + I +Y Sbjct: 158 FKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 217 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SY ++ + +L + + +SPYV Sbjct: 218 GAPAIEDALHIMILSYDKL--------QQPQLAEDTKRVLAGTFPDSPYVT 260 >gi|121594196|ref|YP_986092.1| hypothetical protein Ajs_1829 [Acidovorax sp. JS42] gi|120606276|gb|ABM42016.1| putative transmembrane protein [Acidovorax sp. JS42] Length = 300 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 10/224 (4%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 + T ++Y +A L ++ KA + +A+++ L A+ QY Sbjct: 60 PEDKTAGWSTDKIYSEARDELNGGSYDKAVPLLEKLEGRAAGTPLAQQAQLEKAYAQYKG 119 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ----------MIRDVPYDQRATKL 157 G+ QA + + ++ +P S DY YL G+ DQ+A K Sbjct: 120 GEKAQAIATLDRFMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLSRQDLSERDQKAAKD 179 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + +V R+ S Y AR +T N LA EV + RYY +RG YVAA+ R Q + Sbjct: 180 SFESFRELVTRFPESRYTPDARQRMTYIVNSLAQYEVHVARYYYERGAYVAAVSRAQSAV 239 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A+Y D EEA+ LV +Y AL L + ++ YPQ Sbjct: 240 ADYKDVPATEEALYILVRSYDALGLTQLRDDTRRVMDASYPQSS 283 >gi|260771764|ref|ZP_05880682.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio metschnikovii CIP 69.14] gi|260613056|gb|EEX38257.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio metschnikovii CIP 69.14] Length = 242 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 14/227 (6%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 SS++ + V E+Y A L+ N+ A + +PF + + L Sbjct: 17 GCSSKEEIVPDVP----PAELYSDAQTSLQSGNWLTAIDKLEALDSRYPFGAYSEQVQLD 72 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVP 149 + Y + E +I P + +D+V Y+ G+++ I Sbjct: 73 LIYAYYKNDDLALGLATIERFIRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRSD 132 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 D K R++ERY NS Y A+ + +N+LA ++ +YL+R ++AA Sbjct: 133 RDPEPVKAAFADFKRLLERYPNSLYANDAQQRMIALKNRLAEYDLATADFYLRREAWIAA 192 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 I R Q + Y E A ++++ ++AY L L D A L+Q Sbjct: 193 INRTQELQKTYPGTEAARKSLSIQLKAYQQLGLTDAAERTKQLMQLN 239 >gi|329895228|ref|ZP_08270892.1| putative component of the lipoprotein assembly complex [gamma proteobacterium IMCC3088] gi|328922466|gb|EGG29808.1| putative component of the lipoprotein assembly complex [gamma proteobacterium IMCC3088] Length = 303 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 111/246 (45%), Gaps = 15/246 (6%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L IF + + L D ++ ++++Y +A +L+ +N+ A + Q Sbjct: 20 LRIFLASCILLLGACASNDELDSQANAA-----EQQIYSEAQKYLRSKNYDMAIKALQQL 74 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF A ++ L + Y A + + A +I +P+ ++DY +Y+ G++ Sbjct: 75 ESRYPFGKYAEQAQLEIIYAHYGAYEPEAAIEAANRFIRLHPQHPSIDYAFYMKGLAAYS 134 Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 ++ D + + ++++ R+ S Y AR + RN LA E Sbjct: 135 GNSNIFSRFLPTSESSRDTKHIEEAFTEFAQLLARFPESEYGADARARMVHLRNLLARHE 194 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +++ YY +RG Y+AA+ R + V+ NY + +A+A + Y+ L + + A+ + + Sbjct: 195 IDVANYYFRRGAYLAAVNRGRYVIENYQGSTAMADALAVMAHGYLLLDMPELAQTSIDTL 254 Query: 254 QERYPQ 259 + YP Sbjct: 255 KVNYPD 260 >gi|254291984|ref|ZP_04962764.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|150422123|gb|EDN14090.1| conserved hypothetical protein [Vibrio cholerae AM-19226] Length = 253 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 15/228 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 SS DV D ++Y +A L+ + A E +PF + + L Sbjct: 29 GCSSSPDVVPDVPP-----SQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQL 83 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148 + Y + E + P + +D+V Y+ G+++ R+ Sbjct: 84 DLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRR 143 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D K ++++RY NSPY + A+ + +N+LA ++ +YL+R ++A Sbjct: 144 DRDPEPVKAAFSDFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIA 203 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 AI R Q + Y D E A +++ +EAY L L D L+Q Sbjct: 204 AINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLN 251 >gi|157803367|ref|YP_001491916.1| hypothetical protein A1E_00915 [Rickettsia canadensis str. McKiel] gi|157784630|gb|ABV73131.1| hypothetical protein A1E_00915 [Rickettsia canadensis str. McKiel] Length = 247 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 78/254 (30%), Positives = 137/254 (53%), Gaps = 8/254 (3%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 +L K L++ F I + +++S DV + T +Y + ++ L+++ + KA Sbjct: 2 KLAKL-LSVLFIIGLSLSGCKSKKNSDDVVVPIPT-------LYNEGIILLEKKKYKKAA 53 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E F + P + ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL Sbjct: 54 EEFGRVFYQHPGNEMTPQAELMQAYSLFLATQYEEAVDVLDMFINLHPANVDIAYAYYLK 113 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 +SY +I DV +DQ T L I+E+++N+ Y A + + + LA KE+ +G Sbjct: 114 ALSYYMLISDVNHDQSRTFLAKDSFKDIIEKFSNTKYAIDASLKIDLVNDHLAGKEMMVG 173 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 R+YLK+ +AAI RF+ V+ +Y H+ EA+ RL E+Y+ L L DEA++ S++ Y Sbjct: 174 RFYLKKKNPIAAINRFEEVINHYQTTSHSVEALYRLAESYMMLGLPDEAKKYASVLGYNY 233 Query: 258 PQGYWARYVETLVK 271 P W Y LVK Sbjct: 234 PDSQWYSYAYKLVK 247 >gi|269101903|ref|ZP_06154600.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Photobacterium damselae subsp. damselae CIP 102761] gi|268161801|gb|EEZ40297.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Photobacterium damselae subsp. damselae CIP 102761] Length = 242 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 17/243 (6%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LT+ +AV L G S+ +V D E+Y A L+ N+S+A E Sbjct: 4 LTLTTLLAVAILSGCS--STEEVVPDVPP-----SELYATAQESLQSGNWSQAIERLETL 56 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF + + L + Y + + ++ P + D+V Y++G+++ Sbjct: 57 DSRYPFGAYSDQVQLDLIYAYYKNDDLAMSEATINRFMRLNPINPKSDWVLYMLGLTHMA 116 Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 R D A + + +++RY NS Y A+ + +N+LA + Sbjct: 117 QDRSFMHDLFNVDRSDRDPTAARQAFRDFQVLLQRYPNSEYSADAKARMVFLKNRLANYD 176 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + +Y++RG ++AAI R + V Y D E A +++ +AY L + E I Sbjct: 177 LAVADFYIRRGAWIAAINRCEQVQRLYDDTEAARKSLLLEKKAYEKLGMQKEVERTQKSI 236 Query: 254 QER 256 Sbjct: 237 DLN 239 >gi|115351783|ref|YP_773622.1| competence lipoprotein ComL [Burkholderia ambifaria AMMD] gi|170703043|ref|ZP_02893870.1| competence lipoprotein ComL [Burkholderia ambifaria IOP40-10] gi|171320447|ref|ZP_02909480.1| competence lipoprotein ComL [Burkholderia ambifaria MEX-5] gi|172060754|ref|YP_001808406.1| competence lipoprotein ComL [Burkholderia ambifaria MC40-6] gi|115281771|gb|ABI87288.1| competence lipoprotein ComL [Burkholderia ambifaria AMMD] gi|170132051|gb|EDT00552.1| competence lipoprotein ComL [Burkholderia ambifaria IOP40-10] gi|171094307|gb|EDT39381.1| competence lipoprotein ComL [Burkholderia ambifaria MEX-5] gi|171993271|gb|ACB64190.1| competence lipoprotein ComL [Burkholderia ambifaria MC40-6] Length = 274 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 54/236 (22%), Positives = 94/236 (39%), Gaps = 14/236 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + T ++Y +A L ++ K +YF PF A+++ Sbjct: 27 GCHGLPQKQDE----TATWSNNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFAQQA 82 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146 + A+ + + A + +I +P+ ++ Y YYL GM + Sbjct: 83 QINVAYCNWKDNEAAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQD 142 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A + +V+RY S Y A + N LA+ EV YY +RG Y Sbjct: 143 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 VAAI R QL + +Y A E+A+ ++ +Y L A + ++ +P + Sbjct: 203 VAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPQLAEDTKRVLAGTFPDSPY 258 >gi|147675286|ref|YP_001216200.1| putative lipoprotein [Vibrio cholerae O395] gi|146317169|gb|ABQ21708.1| putative lipoprotein [Vibrio cholerae O395] gi|227012533|gb|ACP08743.1| conserved hypothetical protein [Vibrio cholerae O395] Length = 253 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 15/228 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 SS DV D ++Y +A L+ + A E +PF + + L Sbjct: 29 GCSSSPDVVPDVPP-----SQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQL 83 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148 + Y + E + P + +D+V Y+ G+++ R+ Sbjct: 84 DLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRR 143 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D K ++++RY NSPY + A+ + +N+LA ++ +YL+R ++A Sbjct: 144 DRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIA 203 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 AI R Q + Y D E A +++ +EAY L L D L+Q Sbjct: 204 AINRTQELQKTYPDTEAARQSLEIQLEAYQQLGLTDAVERTKQLMQLN 251 >gi|126640892|ref|YP_001083876.1| putative competence protein (ComL) [Acinetobacter baumannii ATCC 17978] Length = 364 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 52/234 (22%), Positives = 101/234 (43%), Gaps = 11/234 (4%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G S+ +D+ ++ ++KA L + A + +P A++ Sbjct: 1 MGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDATKSLEAIDTYYPTGQYAQQ 59 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------I 145 + L + ++ Y+ A +L E +I P+ NVDY YY+ G+S +M + Sbjct: 60 AQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNMEMNYDSLLRYTSL 119 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 + D K+ Q ++ R+ +S Y A + +LA E+ R+ +KR Sbjct: 120 QQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQELAESEMNAARFNVKRKA 179 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 ++AA R Q V+ +Y EA+A L +Y L +++ + +++ YP Sbjct: 180 WIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQYIEVLKLNYPS 233 >gi|134295825|ref|YP_001119560.1| competence lipoprotein ComL [Burkholderia vietnamiensis G4] gi|134138982|gb|ABO54725.1| competence lipoprotein ComL [Burkholderia vietnamiensis G4] Length = 274 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + T ++Y +A L ++ K +YF PF A+++ Sbjct: 27 GCHGLPQKQDE----TATWSNNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFAQQA 82 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146 + A+ + + A + +I +P+ ++ Y YYL GM + Sbjct: 83 QINVAYCNWKDNEAAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQD 142 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A + +V+RY S Y A + N LA+ EV YY +RG Y Sbjct: 143 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 VAAI R QL + +Y A E+A+ +V +Y L A + ++ +P + Sbjct: 203 VAAINRAQLAIKDYKGAPAIEDALHIMVLSYGKLNQPQLAEDTKRVLAGTFPDSPY 258 >gi|15640727|ref|NP_230357.1| hypothetical protein VC0708 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587776|ref|ZP_01677536.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|153801890|ref|ZP_01956476.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|153818714|ref|ZP_01971381.1| lipoprotein, putative [Vibrio cholerae NCTC 8457] gi|153822751|ref|ZP_01975418.1| lipoprotein, putative [Vibrio cholerae B33] gi|153826781|ref|ZP_01979448.1| lipoprotein, putative [Vibrio cholerae MZO-2] gi|153829373|ref|ZP_01982040.1| putative lipoprotein [Vibrio cholerae 623-39] gi|227080888|ref|YP_002809439.1| hypothetical protein VCM66_0666 [Vibrio cholerae M66-2] gi|229505674|ref|ZP_04395184.1| hypothetical protein VCF_000885 [Vibrio cholerae BX 330286] gi|229508753|ref|ZP_04398246.1| hypothetical protein VCE_000158 [Vibrio cholerae B33] gi|229512404|ref|ZP_04401878.1| hypothetical protein VCB_000044 [Vibrio cholerae TMA 21] gi|229519497|ref|ZP_04408940.1| hypothetical protein VCC_003527 [Vibrio cholerae RC9] gi|229519978|ref|ZP_04409408.1| hypothetical protein VIF_000494 [Vibrio cholerae TM 11079-80] gi|229530512|ref|ZP_04419900.1| hypothetical protein VCG_003632 [Vibrio cholerae 12129(1)] gi|229608692|ref|YP_002879340.1| hypothetical protein VCD_003614 [Vibrio cholerae MJ-1236] gi|254851038|ref|ZP_05240388.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|297580829|ref|ZP_06942755.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|298500819|ref|ZP_07010622.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9655150|gb|AAF93873.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548003|gb|EAX58083.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|124122601|gb|EAY41344.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|126510736|gb|EAZ73330.1| lipoprotein, putative [Vibrio cholerae NCTC 8457] gi|126519734|gb|EAZ76957.1| lipoprotein, putative [Vibrio cholerae B33] gi|148875156|gb|EDL73291.1| putative lipoprotein [Vibrio cholerae 623-39] gi|149739432|gb|EDM53672.1| lipoprotein, putative [Vibrio cholerae MZO-2] gi|227008776|gb|ACP04988.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|229332285|gb|EEN97773.1| hypothetical protein VCG_003632 [Vibrio cholerae 12129(1)] gi|229343030|gb|EEO08018.1| hypothetical protein VIF_000494 [Vibrio cholerae TM 11079-80] gi|229344186|gb|EEO09161.1| hypothetical protein VCC_003527 [Vibrio cholerae RC9] gi|229350554|gb|EEO15500.1| hypothetical protein VCB_000044 [Vibrio cholerae TMA 21] gi|229354277|gb|EEO19207.1| hypothetical protein VCE_000158 [Vibrio cholerae B33] gi|229357897|gb|EEO22814.1| hypothetical protein VCF_000885 [Vibrio cholerae BX 330286] gi|229371347|gb|ACQ61770.1| hypothetical protein VCD_003614 [Vibrio cholerae MJ-1236] gi|254846743|gb|EET25157.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|297535245|gb|EFH74080.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297540600|gb|EFH76658.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 253 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 15/228 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 SS DV D ++Y +A L+ + A E +PF + + L Sbjct: 29 GCSSSPDVVPDVPP-----SQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQL 83 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148 + Y + E + P + +D+V Y+ G+++ R+ Sbjct: 84 DLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRR 143 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D K ++++RY NSPY + A+ + +N+LA ++ +YL+R ++A Sbjct: 144 DRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIA 203 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 AI R Q + Y D E A +++ +EAY L L D L+Q Sbjct: 204 AINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLN 251 >gi|149201858|ref|ZP_01878832.1| Putative ComL lipoprotein [Roseovarius sp. TM1035] gi|149144906|gb|EDM32935.1| Putative ComL lipoprotein [Roseovarius sp. TM1035] Length = 265 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 67/237 (28%), Positives = 128/237 (54%), Gaps = 1/237 (0%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + G + S + + + ++++E+ L +++ A + F + R +P++ +A Sbjct: 2 VIAGCGERESVERGNVNY-ENYTAQQIFERGEYDLAQRDPDLAAKSFAEVERLYPYSDLA 60 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 +++++M AF + Y+++ + + +I YP ++ Y YL+ +SY I +V DQ Sbjct: 61 KRAVIMQAFAHHQDKAYEESRAAAQRFIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQG 120 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 T LQ + ++ERY +S Y A + + LA+KE+EIGRYYLKR + AA RF Sbjct: 121 LTFQALQSLREVIERYPDSEYANSAILKFDLAFDHLASKEMEIGRYYLKRDNFAAAANRF 180 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 ++V+ ++ H EA+ RLVE+Y++L L++EAR +++ + W L+ Sbjct: 181 RVVVEDFQTTTHTAEALHRLVESYLSLGLVNEARTAGAILGHNFQGTDWYEDSYKLL 237 >gi|163802428|ref|ZP_02196321.1| NTPase [Vibrio sp. AND4] gi|159173729|gb|EDP58544.1| NTPase [Vibrio sp. AND4] Length = 242 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 101/242 (41%), Gaps = 17/242 (7%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 T+ +AV L G S++ + V E+Y A L+ N+ A E Sbjct: 5 TLIGLLAVSLLFGCA---SKEEIVPDVP----PSELYADAQTSLQSGNWLSAIEKLEALD 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +PF + + L + Y + ++ P + +D+V Y+ G+S+ Sbjct: 58 SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQ 117 Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 R+ D K +++ERY +SPY + ++ + +N+LA ++ Sbjct: 118 DRNFMHDLFNVDRSDRDPEPVKKAFGDFKKLLERYPSSPYAEDSQRRMVALKNRLANYDL 177 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +YL+R ++AAI R Q + + D E A +++ +EAY L L D +LI+ Sbjct: 178 ATADFYLRREAWIAAINRSQELQKAFPDTEAARKSLEIQLEAYKQLKLDDAVARTEALIK 237 Query: 255 ER 256 Sbjct: 238 LN 239 >gi|229525358|ref|ZP_04414763.1| hypothetical protein VCA_002980 [Vibrio cholerae bv. albensis VL426] gi|229338939|gb|EEO03956.1| hypothetical protein VCA_002980 [Vibrio cholerae bv. albensis VL426] Length = 253 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 15/228 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 SS DV D ++Y +A L+ + A E +PF + + L Sbjct: 29 GCSSSPDVVPDVPP-----SQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQL 83 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148 + Y + E + P + +D+V Y+ G+++ R+ Sbjct: 84 DLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRR 143 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D K ++++RY NSPY + A+ + +N+LA ++ +YL+R ++A Sbjct: 144 DRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIA 203 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 AI R Q + Y D E A +++A +EAY L L D L+Q Sbjct: 204 AINRTQELQKTYPDTEAARKSLAIQLEAYQQLGLTDAIERTKQLMQLN 251 >gi|293609057|ref|ZP_06691360.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829630|gb|EFF87992.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 387 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 107/253 (42%), Gaps = 14/253 (5%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y++ AL++ + A VG S+ +++ ++ +EKA L + A Sbjct: 6 YKITMLALSLGVASAF---VGCSSNPSKKEVVNTGPQ-SSEQAYFEKAQKSLDRGQYLDA 61 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + +P A+++ L + ++ Y+ +L E +I P+ NVDY YY+ Sbjct: 62 TKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGTIALAERFIRLNPQHPNVDYAYYV 121 Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 ++ + ++ D K+ Q ++ R+ +S Y A + Sbjct: 122 RAVANMEQNYDSLMRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIG 181 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +LA E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L + Sbjct: 182 QELAENEMTAARFNVKRKAWIAAAERSQWVIEHYPQTPQIPEALATLAYSYDKLGDKATS 241 Query: 247 REVVSLIQERYPQ 259 ++ + +++ YP Sbjct: 242 QQYIEVLKLNYPS 254 >gi|330446993|ref|ZP_08310644.1| bamD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491184|dbj|GAA05141.1| bamD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 242 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 97/243 (39%), Gaps = 17/243 (6%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LTI +AV L G SS++ + V +Y A L+ N++ A E Sbjct: 4 LTITTLLAVALLSGC---SSKEEVIPDVP----PSNLYATAQTALQSGNWTSAIEQLEAL 56 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF + + L + Y + + E ++ P+ D+V Y+ G+++ Sbjct: 57 DSRYPFGAYSDQVQLDLIYAYYKSDDLALGEATIERFLRLNPDHPQADWVVYMRGLTHMA 116 Query: 144 MIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 R D ++ ++ERY S Y A+ + +N+LA + Sbjct: 117 QDRSFMHDMFNINRFDRDPTPSRQAFTDFKYLLERYPESEYGADAKARMIFLKNRLANYD 176 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +Y++R ++AAI R Q V Y D E A E++ AY L L E ++ Sbjct: 177 LATADFYVRREAWIAAINRCQQVQRLYPDTEAARESLKLEKTAYEKLNLQKEVERTEKMM 236 Query: 254 QER 256 + Sbjct: 237 KLN 239 >gi|294085893|ref|YP_003552653.1| competence lipoprotein ComL [Candidatus Puniceispirillum marinum IMCC1322] gi|292665468|gb|ADE40569.1| competence lipoprotein ComL, putative [Candidatus Puniceispirillum marinum IMCC1322] Length = 270 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 69/252 (27%), Positives = 118/252 (46%), Gaps = 6/252 (2%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K I + + G + R ++Y +A+ N KA Sbjct: 1 MVKHIPLIVLASTALLVAGCSSTEVEEQV------ERPVEQLYNEALNTALAGNAKKAAP 54 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F + R P++ +A ++ LM+A+ Y Y +A + + ++ P + V+Y YYL Sbjct: 55 KFEEVERQHPYSSLAVRAQLMAAWAFYQDNNYPRAIAALDRFVELNPADERVEYAYYLKA 114 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 + Y + I DV D TKL +Q +V R+ + Y + A + + R+ LA KE+ +GR Sbjct: 115 LCYYEQIVDVQRDAEMTKLAMQAFEELVRRFPDGDYFRDATLKIDLTRSHLAGKEMAVGR 174 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 +YL + Y AA+ RF+ V+ +Y EA+ R+ EAY++L L EA V + YP Sbjct: 175 FYLSKQHYGAALRRFENVVTDYDTTNQVPEALYRMTEAYLSLGLASEANRVEEVAVYNYP 234 Query: 259 QGYWARYVETLV 270 + W + + L Sbjct: 235 KSIWTQRLLELR 246 >gi|89067817|ref|ZP_01155261.1| competence lipoprotein ComL, putative [Oceanicola granulosus HTCC2516] gi|89046415|gb|EAR52471.1| competence lipoprotein ComL, putative [Oceanicola granulosus HTCC2516] Length = 284 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 69/226 (30%), Positives = 115/226 (50%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 D D E++E+ L A YF + R +P++ A+++L+M A Sbjct: 31 DPKQPGALDAYSAAEIFERGEYELARGQADDAAFYFGEIERLYPYSEFAKRALIMQAAAY 90 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + Y A + + +I YP + Y YL+ +SY I ++ DQ T LQ + Sbjct: 91 HQDRDYPNARAAAQRFIDFYPADPDAAYAQYLLALSYYDQIDEIGRDQGLTFQALQALRT 150 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 ++E Y +S Y + A + + LAAKE+E+GR+YLKR + AA+ RF++V+ ++ Sbjct: 151 VIEVYPDSEYARAAIPKFDLAFDHLAAKEMEVGRFYLKRDHFAAAVNRFRVVVEDFQTTA 210 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 H EA+ RLVEAY++L L DEA+ +++ Y W + L+ Sbjct: 211 HTAEALHRLVEAYLSLGLTDEAQTAGAILGHNYRSTEWYQESFALL 256 >gi|227357803|ref|ZP_03842151.1| DNA uptake lipoprotein ComL [Proteus mirabilis ATCC 29906] gi|227161913|gb|EEI46931.1| DNA uptake lipoprotein ComL [Proteus mirabilis ATCC 29906] Length = 241 Score = 251 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 10/218 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 T E+Y + L + N+ A + +PF +++ L + Y + Sbjct: 22 KDATADMSPSELYATSQEKLLDGNYGAAIKQLESLDNRYPFGPYSQQVQLDLIYAYYKSA 81 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158 + A S + ++ P N+DYV Y+ G++ + I D + ++ Sbjct: 82 ELPMAISAIDRFMRLNPTHPNIDYVLYMRGLTAQALDDSALQGFFGIDRSDRDPQHARVA 141 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + S++V Y +S Y A + +N+LA E+ + ++Y KRG YVA I R + ++ Sbjct: 142 FKDFSQLVRYYPDSLYTADATKRLVFLKNRLAKYELSVAKFYTKRGAYVAVINRVEQMMR 201 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +Y D E EA+ + AY L L EA +V SLI Sbjct: 202 DYPDTEATREALVYMENAYKKLGLTQEADKVASLIAAN 239 >gi|71282332|ref|YP_270574.1| putative lipoprotein [Colwellia psychrerythraea 34H] gi|71148072|gb|AAZ28545.1| putative lipoprotein [Colwellia psychrerythraea 34H] Length = 252 Score = 251 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 107/253 (42%), Gaps = 14/253 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K + I ++ L G SS + +D V D + + ++ A L + KA + Sbjct: 1 MDKLTVKIILTVLALALTGC---SSSENDIDKVPD-KSAQSLFVDARTALDNGLYQKAIQ 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 FPF ++ + L + Y +G Q +L + ++ P + N+DYVYY+ Sbjct: 57 ILGAIDSRFPFGPISHQVQLDLIYAYYKSGDAAQGIALADRFLRLNPNNSNIDYVYYMRA 116 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + I D A++ IV Y +S Y +R + +++ Sbjct: 117 LINISTEENLFQDLAGIDRSDRDPEASRSAFNDFKSIVTDYPDSKYAADSRKRMISIKSR 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + +YY+KR Y +A R + V+ +S + E+A+ ++ Y L L D + Sbjct: 177 LAQYEIAVAKYYVKREAYASAANRARYVVEYFSPSPEIEQALEIMINCYDKLGLADLKKN 236 Query: 249 VVSLIQERYPQGY 261 + ++ YP Sbjct: 237 ALQVLAANYPNNK 249 >gi|197284292|ref|YP_002150164.1| outer membrane protein assembly complex subunit YfiO [Proteus mirabilis HI4320] gi|194681779|emb|CAR40993.1| putative lipoprotein [Proteus mirabilis HI4320] Length = 244 Score = 251 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 10/218 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 T E+Y + L + N+ A + +PF +++ L + Y + Sbjct: 25 KDATADMSPSELYATSQEKLLDGNYGAAIKQLESLDNRYPFGPYSQQVQLDLIYAYYKSA 84 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158 + A S + ++ P N+DYV Y+ G++ + I D + ++ Sbjct: 85 ELPMAISAIDRFMRLNPTHPNIDYVLYMRGLTAQALDDSALQGFFGIDRSDRDPQHARVA 144 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + S++V Y +S Y A + +N+LA E+ + ++Y KRG YVA I R + ++ Sbjct: 145 FKDFSQLVRYYPDSLYTADATKRLVFLKNRLAKYELSVAKFYTKRGAYVAVINRVEQMMR 204 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +Y D E EA+ + AY L L EA +V SLI Sbjct: 205 DYPDTEATREALVYMENAYKKLGLTQEADKVASLIAAN 242 >gi|284007739|emb|CBA73553.1| lipoprotein [Arsenophonus nasoniae] Length = 269 Score = 251 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 58/232 (25%), Positives = 99/232 (42%), Gaps = 17/232 (7%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94 + G S++D +S ++Y + L+ N+ A + +PF A+ Sbjct: 43 VTGCS--SNKDAVPES-----SPTDIYTSSQEKLQSGNYKGAIKLLETLDNRYPFGPYAQ 95 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS----------YAQM 144 ++ L + Y + + A + + +I P N+DYV Y+ G++ Sbjct: 96 QAQLDMIYAYYKSAELPLAIATIDRFIRLNPTHPNIDYVLYMRGLTAQALDDSALQDFFG 155 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 I D + + + S++V Y NS Y A + + +LA E+ I +YY KRG Sbjct: 156 IDRSDRDPQHALVAFRDFSQLVRFYPNSIYATDASKRLAFLKERLAKYELAIVKYYNKRG 215 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 YVA I R + +L NY D + A+ + AY L L E +V +LI Sbjct: 216 AYVAVINRTEQMLKNYPDTQSTRNALKYMEIAYNQLGLSQEKNKVAALIAAN 267 >gi|167836419|ref|ZP_02463302.1| competence lipoprotein ComL [Burkholderia thailandensis MSMB43] Length = 274 Score = 251 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 93/236 (39%), Gaps = 14/236 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + T ++Y +A L ++ K +YF PF A+++ Sbjct: 27 GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 82 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146 + A+ + + A + +I +P+ +V Y YYL GM + Sbjct: 83 QINVAYCNWKDNETASADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 142 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A + +V+RY S Y A + N LA+ EV YY +RG Y Sbjct: 143 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 VAAI R QL + Y +A E+A+ + +Y L A + ++ +P + Sbjct: 203 VAAINRAQLAIKEYKNAPAIEDALHIMTLSYAKLNQPQLADDTKRVLASTFPDSPY 258 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F +P + A + + +A Y G Y A + + I +Y Sbjct: 158 FKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 217 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SYA++ + +L + + +SPYV Sbjct: 218 NAPAIEDALHIMTLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 260 >gi|254224982|ref|ZP_04918596.1| conserved hypothetical protein [Vibrio cholerae V51] gi|125622369|gb|EAZ50689.1| conserved hypothetical protein [Vibrio cholerae V51] Length = 253 Score = 251 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 15/228 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 SS DV D ++Y +A L+ + A E +PF + + L Sbjct: 29 GCSSSPDVVPDVPP-----SQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQL 83 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148 + Y + E + P + +D+V Y+ G+++ R+ Sbjct: 84 DLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRR 143 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D K ++++RY NSPY + A+ + +N+LA ++ +YL+R ++A Sbjct: 144 DRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIA 203 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 AI R Q + Y + E A +++ +EAY L L D L+Q Sbjct: 204 AINRTQELQKTYPNTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLN 251 >gi|320157326|ref|YP_004189705.1| putative component of the lipoprotein assembly complex [Vibrio vulnificus MO6-24/O] gi|319932638|gb|ADV87502.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Vibrio vulnificus MO6-24/O] Length = 241 Score = 251 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 97/242 (40%), Gaps = 17/242 (7%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 T+ +AV L G SS + D E+Y +A L+ N+ A E Sbjct: 5 TLAGLLAVSVLFGCS--SSEQIVPDVPP-----AELYAEAQTSLQGGNWLTAIEKLEALD 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +PF + + L + Y + + P + +D+V Y+ G+++ Sbjct: 58 SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFTRLNPTHEKMDWVLYMRGLTHMAQ 117 Query: 145 ----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 I D K +++ERY +SPY + ++ + +N+LA ++ Sbjct: 118 DRNFMHDLFNIDRSDRDPEPVKQAFDDFKKLLERYPSSPYAEDSQKRMFALKNRLAEYDL 177 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 YYL+R ++AAI R Q + Y D A +++ +EAY L L D LI+ Sbjct: 178 ATADYYLRREAWIAAINRSQELQKTYPDTIAARKSLKIQLEAYKQLGLQDAIARTEELIR 237 Query: 255 ER 256 Sbjct: 238 LN 239 >gi|85703757|ref|ZP_01034861.1| Putative ComL lipoprotein [Roseovarius sp. 217] gi|85672685|gb|EAQ27542.1| Putative ComL lipoprotein [Roseovarius sp. 217] Length = 265 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 68/237 (28%), Positives = 129/237 (54%), Gaps = 1/237 (0%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + G + S + + + ++++E+ L +++ A F + R +P++ +A Sbjct: 2 AIAGCGNKESVERGTVNY-ENYTAQQIFERGEYDLAQRDPELAATSFAEVERLYPYSDLA 60 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 +++++M AF + A +Y+++ + + +I YP ++ Y YL+ +SY I +V DQ Sbjct: 61 KRAVIMQAFAHHQAKEYEESRAAAQRFIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQG 120 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 T LQ + ++ERY +S Y A + + LA+KE+EIGRYYLKR + AA RF Sbjct: 121 LTFQALQSLREVIERYPDSEYANAAILKFDLAFDHLASKEMEIGRYYLKRDNFAAAANRF 180 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 ++V+ ++ H EA+ RLVE+Y++L L++EAR +++ + W L+ Sbjct: 181 RVVVEDFQTTTHTAEALHRLVESYLSLGLVNEARTAGAILGHNFQGTDWYEDSYKLL 237 >gi|294676385|ref|YP_003577000.1| competence lipoprotein ComL [Rhodobacter capsulatus SB 1003] gi|294475205|gb|ADE84593.1| competence lipoprotein ComL [Rhodobacter capsulatus SB 1003] Length = 281 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 75/229 (32%), Positives = 125/229 (54%), Gaps = 3/229 (1%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNF---SKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 + + E+Y++ L+ N ++A YF++ R +P++ A+++L+M AF Sbjct: 26 TQKEPPLENFTAEEIYKRGEYELEVGNPRRPAEALRYFSEVERLYPYSEYAKRALIMEAF 85 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Q+ A KY+ A S + Y+ YP S++ Y YL+ +SY I +V DQ T LQ + Sbjct: 86 AQHKAKKYEDARSSAQRYLDTYPGSEDAAYAKYLLALSYYDQIDEVGRDQGLTFQALQAL 145 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 ++E Y +S Y + A + + LA+KE+EIGR+YLK+G Y AAI RF++V+ Y Sbjct: 146 RAVIEEYPDSDYARSAALKFDLAFDHLASKEMEIGRFYLKKGHYTAAINRFRVVVEQYQT 205 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 H EA+ RLVE Y++L L DEA+ +++ + + +K Sbjct: 206 TTHTPEALMRLVECYLSLGLTDEAQTAGAILGHNFQSSPFYDDAYKRLK 254 >gi|50085932|ref|YP_047442.1| putative competence protein (ComL) [Acinetobacter sp. ADP1] gi|49531908|emb|CAG69620.1| putative competence protein (ComL) [Acinetobacter sp. ADP1] Length = 351 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 59/253 (23%), Positives = 115/253 (45%), Gaps = 15/253 (5%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y++ AL++ + A+ VG ++V ++ ++KA L +++A Sbjct: 6 YKITMLALSLGVAAAM---VGCSSNPKKEVVDTGP--QSSEQIYFQKAEKALDRGQYTEA 60 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + +P A ++ L +V++ +Y+ S + +I P+ N+DYVYY+ Sbjct: 61 AKSLEAIDTYYPTGQYAAQAQLDLLYVKFQQKEYETVVSQADRFIRLNPQHPNIDYVYYI 120 Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 G++ ++ ++ D KL Q ++ R+ +SPY A + Sbjct: 121 RGVANMELNYDSLMRYTSLQQSHRDTSYMKLAYQNFVDLIRRFPSSPYSVDAAQRMKFIG 180 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +LA E+ + R+ +KR +VAAI R Q V+ ++ EA+A L AY L + Sbjct: 181 QELAESEMNVARFNIKRKAWVAAIDRAQWVVEHFPQTPQTPEALATLAYAYNELGDQATS 240 Query: 247 REVVSLIQERYPQ 259 ++ V+L++ YP Sbjct: 241 QQYVNLLKLNYPD 253 >gi|148259767|ref|YP_001233894.1| DNA uptake lipoprotein-like protein [Acidiphilium cryptum JF-5] gi|326403265|ref|YP_004283346.1| putative lipoprotein [Acidiphilium multivorum AIU301] gi|146401448|gb|ABQ29975.1| DNA uptake lipoprotein-like protein [Acidiphilium cryptum JF-5] gi|325050126|dbj|BAJ80464.1| putative lipoprotein [Acidiphilium multivorum AIU301] Length = 315 Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats. Identities = 61/217 (28%), Positives = 107/217 (49%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + +Y + +L + KA F + ++P++ A + L+ + +Y + A Sbjct: 77 KPASALYADGIAYLHKGENKKAARTFGEIEVNYPYSTWASHAELLQGYAEYREQNFDSAV 136 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 S +I +P S Y YYL + + + I DV DQ T Q + ++ R+ +S Y Sbjct: 137 SALNRFIELHPASPEAAYAYYLKALCFYEQIEDVQRDQTFTLEAAQALQDVISRFPDSAY 196 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 + AR + + N+LA ++E+GR+Y ++ Y AAI R+Q+V+ Y EA+ RLV Sbjct: 197 ARDARIKLRLVENRLAGHQMEVGRFYQRQNLYAAAISRYQVVVQQYQTTTFVPEALDRLV 256 Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 E Y+ L L+ EAR +++ YP W R ++ Sbjct: 257 ECYLDLGLVKEARRNAAVLGYNYPGSRWYRNAYATLR 293 >gi|227329205|ref|ZP_03833229.1| outer membrane protein assembly complex subunit YfiO [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 244 Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats. Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 16/230 (6%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G S+D DS E+Y A L++ NF A +PF +++ Sbjct: 19 GCSSN-SKDAVPDSPP-----SEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQV 72 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-------- 148 L + Y + + A + + ++ P NVDYV Y+ G++ + Sbjct: 73 QLDLIYAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVD 132 Query: 149 --PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D + + + S++++ Y NS Y A + + +LA E+ + +YY KRG Y Sbjct: 133 RSDRDPQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRGAY 192 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 VA + R + +L +Y D + + A+ + AY L L +A +V +I Sbjct: 193 VAVVNRVEQMLRDYPDTQATKTALPLMENAYRELQLAAQADKVAKVIAAN 242 >gi|15604057|ref|NP_220572.1| hypothetical protein RP183 [Rickettsia prowazekii str. Madrid E] gi|18203676|sp|Q9ZDY1|Y183_RICPR RecName: Full=UPF0169 lipoprotein RP183; Flags: Precursor gi|3860748|emb|CAA14649.1| unknown [Rickettsia prowazekii] gi|292571778|gb|ADE29693.1| DNA uptake lipoprotein [Rickettsia prowazekii Rp22] Length = 251 Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats. Identities = 76/254 (29%), Positives = 130/254 (51%), Gaps = 8/254 (3%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 +L K L+ I + ++ S D+ T +Y + ++ L ++ + KA Sbjct: 2 KLTKL-LSALLVIGLVLGGCKSKKDSNDIVAPIAT-------LYNEGIILLDKKKYKKAA 53 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E F + P + ++ LM A+ + A +Y++A + +I +P + ++ Y YYL Sbjct: 54 EEFGKIFYQHPGNEMTPQAELMQAYSLFLAAQYEEAVDILNMFINLHPANIDIAYAYYLK 113 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 +SY +I DV +DQ T L ++ ++ N+ Y + + + + LA KE+ IG Sbjct: 114 ALSYYMLISDVNHDQSRTFLSKDSFEDVITKFPNTKYAIDSSLKIDLVNDHLAGKEMMIG 173 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 R+YLK+ +AAI RF+ V+ NY H+ EA+ RLVE+Y+ L L DEA++ S++ Y Sbjct: 174 RFYLKKKNPMAAINRFEEVIDNYQTTYHSVEALYRLVESYMMLGLHDEAKKYTSVLGYNY 233 Query: 258 PQGYWARYVETLVK 271 P W Y LVK Sbjct: 234 PNSKWYSYAYRLVK 247 >gi|261820450|ref|YP_003258556.1| outer membrane protein assembly complex subunit YfiO [Pectobacterium wasabiae WPP163] gi|261604463|gb|ACX86949.1| outer membrane assembly lipoprotein YfiO [Pectobacterium wasabiae WPP163] Length = 244 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 16/230 (6%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G S+D DS E+Y A L++ NF A +PF +++ Sbjct: 19 GCSGN-SKDAVPDSPP-----SEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQV 72 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-------- 148 L + Y + + A + + ++ P NVDYV Y+ G++ + Sbjct: 73 QLDLIYAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVD 132 Query: 149 --PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D + + + S++++ Y NS Y A + + +LA E+ + +YY KRG Y Sbjct: 133 RSDRDPQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRGAY 192 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 VA + R + +L +Y D + + A+ + AY L L +A +V +I Sbjct: 193 VAVVNRVEQMLRDYPDTQATKNALPLMESAYRELQLAAQADKVAKVIAAN 242 >gi|134095126|ref|YP_001100201.1| TPR repeat-containing protein [Herminiimonas arsenicoxydans] gi|133739029|emb|CAL62077.1| Competence lipoprotein ComL precursor [Herminiimonas arsenicoxydans] Length = 261 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 110/256 (42%), Gaps = 20/256 (7%) Query: 19 LYKFA-LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + K + + F ++ C L + +++ ++Y +A + N+ KA Sbjct: 1 MLKLTYIALAFLLSACSLTPDQIDETKN---------WSPSKLYSEAREEMNTGNYEKAV 51 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 +F + +PF A+++ + A+ Y G QA + E +I +P+ NVDY+YYL Sbjct: 52 SHFEKLESRYPFGTYAQQAQMEIAYAYYRQGDQPQALAAVERFIKLHPDHPNVDYMYYLR 111 Query: 138 GMSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+ D +A + + ER+ +S Y A + N Sbjct: 112 GLINFNDKVSVFDFLSRQDPTERDPKAAREAFDSFKLLTERFPDSKYTPDASARLAYLVN 171 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 +A +V + YY +RG Y+AA R Q + NY A AE A+ ++++Y AL L Sbjct: 172 AMAQYDVHVANYYYRRGAYLAAANRAQAAVKNYPGAPAAEGALYVMIQSYDALNLPQLRD 231 Query: 248 EVVSLIQERYPQGYWA 263 + +++ +P + Sbjct: 232 DAERVMKTNFPNSVYF 247 >gi|242240267|ref|YP_002988448.1| outer membrane protein assembly complex subunit YfiO [Dickeya dadantii Ech703] gi|242132324|gb|ACS86626.1| outer membrane assembly lipoprotein YfiO [Dickeya dadantii Ech703] Length = 243 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 15/228 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+D D R E+Y A L+ NF A +PF +++ L Sbjct: 19 GCSNSKDTVPD-----RPPAELYATAQEKLQSGNFKAAITQLEALDNRYPFGPYSQQVQL 73 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148 + Y + A + + +I P NVDYV Y+ G++ + Sbjct: 74 DLIYAYYKSADLSLAQASIDRFIRLNPTHPNVDYVLYMRGLTNMALDDSALQGFFGVDRS 133 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D + + + S++V+ Y S Y A + + +LA E + +YY KRG YVA Sbjct: 134 DRDPQYARSAFKAFSQLVQEYPRSQYATDASKRLAYIKERLAKYEFSVAQYYTKRGAYVA 193 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 + R + +L +Y D + +A+ + AY L L+ EA +V +I Sbjct: 194 VVNRVEQMLKDYPDTQATRKALPLMENAYRELQLVGEADKVAKIIAAN 241 >gi|167581725|ref|ZP_02374599.1| competence lipoprotein ComL [Burkholderia thailandensis TXDOH] gi|167619841|ref|ZP_02388472.1| competence lipoprotein ComL [Burkholderia thailandensis Bt4] gi|257138983|ref|ZP_05587245.1| competence lipoprotein ComL [Burkholderia thailandensis E264] Length = 274 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + T ++Y +A L ++ K +YF PF A+++ Sbjct: 27 GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 82 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146 + A+ + + A + +I +P+ +V Y YYL GM + Sbjct: 83 QINVAYCNWKDNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 142 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A + +V+RY S Y A + N LA+ EV YY +RG Y Sbjct: 143 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 VAAI R QL + Y +A E+A+ ++ +Y L A + ++ +P + Sbjct: 203 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F +P + A + + +A Y G Y A + + I +Y Sbjct: 158 FKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 217 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SYA++ + +L + + +SPYV Sbjct: 218 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 260 >gi|53804664|ref|YP_113450.1| competence lipoprotein ComL [Methylococcus capsulatus str. Bath] gi|53758425|gb|AAU92716.1| competence lipoprotein ComL [Methylococcus capsulatus str. Bath] Length = 286 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 98/260 (37%), Gaps = 16/260 (6%) Query: 22 FALTIFFSIAVCFLVGWER------QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 + AV L D + + Y +A + + ++ K Sbjct: 8 VLIAALLGGAVSGLTACSSFPFWSAGKEEDTDIKDEHADWGPAQFYAEAKHAMMDGSYDK 67 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + + + +PF A ++ + AF Y + + A + + +I P +VDY YY Sbjct: 68 AIKLYEKLEARYPFGDYATQAQIDVAFCYYKNNEPESAIAAVDRFIKLNPTEPHVDYAYY 127 Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 L G+ D + + ++ ++ NS Y + AR Sbjct: 128 LRGLINYNRGIGFIDRWLPTDSSQRDPGSARDAYNDFETLLNKFPNSVYREDARQRAIAL 187 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 RN LA ++ + YY++R YVAAI R V+ Y + A+ + +AY L + Sbjct: 188 RNNLAMYDIHVADYYMRRRAYVAAIRRSAEVVQKYQRTQAIPHALRIMEDAYRQLDMPQM 247 Query: 246 AREVVSLIQERYPQGYWARY 265 A ++ + Y +G ++ Sbjct: 248 ADDIARVYALNYAEGRLSKD 267 >gi|227115224|ref|ZP_03828880.1| outer membrane protein assembly complex subunit YfiO [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 244 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 16/230 (6%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G S+D DS E+Y A L++ NF A +PF +++ Sbjct: 19 GCSSN-SKDAVPDSPP-----SEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQV 72 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-------- 148 L + Y + + A + + ++ P NVDYV Y+ G++ + Sbjct: 73 QLDLIYAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVD 132 Query: 149 --PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D + + + S++++ Y NS Y A + + +LA E+ + +YY KRG Y Sbjct: 133 RSDRDPQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRGAY 192 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 VA + R + +L +Y D + + A+ + AY L L +A +V +I Sbjct: 193 VAVVNRVEQMLRDYPDTQATKNALPLMENAYRELQLAAQADKVAKIITAN 242 >gi|50122270|ref|YP_051437.1| outer membrane protein assembly complex subunit YfiO [Pectobacterium atrosepticum SCRI1043] gi|49612796|emb|CAG76246.1| putative lipoprotein [Pectobacterium atrosepticum SCRI1043] Length = 244 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 16/230 (6%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G S+D DS E+Y A L++ NF A +PF +++ Sbjct: 19 GCSSN-SKDAVPDSPP-----SEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQV 72 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-------- 148 L + Y + + A + + ++ P NVDYV Y+ G++ + Sbjct: 73 QLDLIYAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVD 132 Query: 149 --PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D + + + S++++ Y NS Y A + + +LA E+ + +YY KRG Y Sbjct: 133 RSDRDPQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRGAY 192 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 VA + R + +L +Y D + + A+ + AY L L +A +V +I Sbjct: 193 VAVVNRVEQMLRDYPDTQATKNALPLMESAYRELQLAAQADKVAKVIAAN 242 >gi|262273644|ref|ZP_06051457.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Grimontia hollisae CIP 101886] gi|262222059|gb|EEY73371.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Grimontia hollisae CIP 101886] Length = 243 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 94/218 (43%), Gaps = 10/218 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + + E+Y++A + L E N++ A + +PF + + L + Y Sbjct: 22 EEIVPDIPPSELYQEAQVSLNEGNWNTAIQKLEALDSRYPFGAYSEQVQLDLIYAYYKND 81 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158 + + +I P +D+V Y+ G++ R + D + Sbjct: 82 DLALGEATIDRFIRMNPGHPEMDWVLYMRGLTNMAQDRSLVHDLLSMEREDRDPEPVRRA 141 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 R+++RY +S Y A + +N+LA E+ +Y++R +VA I R Q + Sbjct: 142 FVDFRRLLDRYPDSDYAADAAKRLVALKNRLADYELATADFYVRREAWVAVINRCQQIQR 201 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 ++ D A+ ++ +++AY AL L + A+ + L++ Sbjct: 202 DFPDTNAAKRSLPMMLKAYEALKLEEPAQRIRELMKLN 239 >gi|134277813|ref|ZP_01764528.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 305] gi|226197143|ref|ZP_03792720.1| putative competence lipoprotein ComL [Burkholderia pseudomallei Pakistan 9] gi|237812528|ref|YP_002896979.1| competence lipoprotein ComL [Burkholderia pseudomallei MSHR346] gi|254197470|ref|ZP_04903892.1| putative competence lipoprotein ComL [Burkholderia pseudomallei S13] gi|254259639|ref|ZP_04950693.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 1710a] gi|134251463|gb|EBA51542.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 305] gi|169654211|gb|EDS86904.1| putative competence lipoprotein ComL [Burkholderia pseudomallei S13] gi|225930522|gb|EEH26532.1| putative competence lipoprotein ComL [Burkholderia pseudomallei Pakistan 9] gi|237504631|gb|ACQ96949.1| competence lipoprotein ComL [Burkholderia pseudomallei MSHR346] gi|254218328|gb|EET07712.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 1710a] Length = 280 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + T ++Y +A L ++ K +YF PF A+++ Sbjct: 33 GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 88 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146 + A+ + + A + +I +P+ +V Y YYL GM + Sbjct: 89 QINVAYCNWKDNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 148 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A + +V+RY S Y A + N LA+ EV YY +RG Y Sbjct: 149 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 208 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 VAAI R QL + Y +A E+A+ ++ +Y L A + ++ +P + Sbjct: 209 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 264 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F +P + A + + +A Y G Y A + + I +Y Sbjct: 164 FKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 223 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SYA++ + +L + + +SPYV Sbjct: 224 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 266 >gi|126454430|ref|YP_001066470.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 1106a] gi|167719291|ref|ZP_02402527.1| competence lipoprotein ComL [Burkholderia pseudomallei DM98] gi|167738291|ref|ZP_02411065.1| competence lipoprotein ComL [Burkholderia pseudomallei 14] gi|167823888|ref|ZP_02455359.1| competence lipoprotein ComL [Burkholderia pseudomallei 9] gi|167845427|ref|ZP_02470935.1| competence lipoprotein ComL [Burkholderia pseudomallei B7210] gi|167893969|ref|ZP_02481371.1| competence lipoprotein ComL [Burkholderia pseudomallei 7894] gi|167902419|ref|ZP_02489624.1| competence lipoprotein ComL [Burkholderia pseudomallei NCTC 13177] gi|167918688|ref|ZP_02505779.1| competence lipoprotein ComL [Burkholderia pseudomallei BCC215] gi|217421678|ref|ZP_03453182.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 576] gi|242317204|ref|ZP_04816220.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 1106b] gi|254297449|ref|ZP_04964902.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 406e] gi|126228072|gb|ABN91612.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 1106a] gi|157807603|gb|EDO84773.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 406e] gi|217395420|gb|EEC35438.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 576] gi|242140443|gb|EES26845.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 1106b] Length = 274 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + T ++Y +A L ++ K +YF PF A+++ Sbjct: 27 GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 82 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146 + A+ + + A + +I +P+ +V Y YYL GM + Sbjct: 83 QINVAYCNWKDNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 142 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A + +V+RY S Y A + N LA+ EV YY +RG Y Sbjct: 143 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 VAAI R QL + Y +A E+A+ ++ +Y L A + ++ +P + Sbjct: 203 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F +P + A + + +A Y G Y A + + I +Y Sbjct: 158 FKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 217 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SYA++ + +L + + +SPYV Sbjct: 218 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 260 >gi|53719165|ref|YP_108151.1| putative lipoprotein [Burkholderia pseudomallei K96243] gi|167815477|ref|ZP_02447157.1| putative lipoprotein [Burkholderia pseudomallei 91] gi|167910660|ref|ZP_02497751.1| putative lipoprotein [Burkholderia pseudomallei 112] gi|52209579|emb|CAH35532.1| putative lipoprotein [Burkholderia pseudomallei K96243] Length = 274 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + T ++Y +A L ++ K +YF PF A+++ Sbjct: 27 GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 82 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146 + A+ + + A + +I +P+ +V Y YYL GM + Sbjct: 83 QINVAYCNWKDNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 142 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A + +V+RY S Y A + N LA+ EV YY +RG Y Sbjct: 143 MSERDPQALRESYDAFRAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 VAAI R QL + Y +A E+A+ ++ +Y L A + ++ +P + Sbjct: 203 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F +P + A + + +A Y G Y A + + I +Y Sbjct: 158 FRAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 217 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SYA++ + +L + + +SPYV Sbjct: 218 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 260 >gi|254189037|ref|ZP_04895548.1| putative competence lipoprotein ComL [Burkholderia pseudomallei Pasteur 52237] gi|157936716|gb|EDO92386.1| putative competence lipoprotein ComL [Burkholderia pseudomallei Pasteur 52237] Length = 274 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + T ++Y +A L ++ K +YF PF A+++ Sbjct: 27 GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 82 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146 + A+ + + A + +I +P+ +V Y YYL GM + Sbjct: 83 QINVAYCNWKDNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 142 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A + +V+RY S Y A + N LA+ EV YY +RG Y Sbjct: 143 MSERDPQALRESYDAFKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 VAAI R QL + Y +A E+A+ ++ +Y L A + ++ +P + Sbjct: 203 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F +P + A + + +A Y G Y A + + I +Y Sbjct: 158 FKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 217 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SYA++ + +L + + +SPYV Sbjct: 218 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 260 >gi|260221243|emb|CBA29611.1| Competence lipoprotein comL [Curvibacter putative symbiont of Hydra magnipapillata] Length = 268 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 102/254 (40%), Gaps = 18/254 (7%) Query: 21 KFALTIFFSIA--VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 K ++ + L G T +Y +A + + KA Sbjct: 5 KLSVVCATMLTTMATLLAGCSSAPVDK------TAGMSPNRLYAEAKDEMGASQWDKAVP 58 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + +A+++ L A+ Q+ AG+ Q+ + E +I +P S +DY YL G Sbjct: 59 LLEKLEARAAGTPLAQQAQLDKAYAQFKAGEQAQSLATLERFIKLHPASPALDYAIYLRG 118 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + DQ+A K + + R+ +S Y A+ + Sbjct: 119 IVNFNDDLGLLSSITRQDLAERDQKAAKESFESFKELTTRFPDSKYAPDAQQRMNYIVGS 178 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA EV + +YY KRG Y+AA R Q + +Y D EEA+ L ++Y AL + + Sbjct: 179 LAQYEVHVAKYYYKRGAYLAAANRAQQCITDYRDVPATEEALFILYKSYDALGMEQLRDD 238 Query: 249 VVSLIQERYPQGYW 262 ++++ +PQ + Sbjct: 239 AKRVLEKNFPQSDF 252 >gi|254419865|ref|ZP_05033589.1| outer membrane assembly lipoprotein YfiO [Brevundimonas sp. BAL3] gi|196186042|gb|EDX81018.1| outer membrane assembly lipoprotein YfiO [Brevundimonas sp. BAL3] Length = 284 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 63/261 (24%), Positives = 118/261 (45%), Gaps = 6/261 (2%) Query: 12 FEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71 ++ + + + A + G + + R +Y L+++ Sbjct: 3 SSLSVSKIRSGLVLMAAAAAAMTIAGCAGNA----RPKLAYEERPVEALYNTGYQRLEQR 58 Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 ++ A +YF + R P++ AR+S+LM + Y Y A + + +I+ +P + + Sbjct: 59 RWADAVDYFQEVERQHPYSDWARRSILMQVYAFYQNNNYADAIAASDRFISLFPGNPSAA 118 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Y +Y+ + + I DV DQ L + + RY +PY A + + +QLA Sbjct: 119 YAFYMKAVCNFEQITDVGRDQGYANAALAGLKDVARRYPGTPYASDAAVKIDMVNDQLAG 178 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAYVALALMDEAREV 249 KE+ IGRYY + + +AA+ R++ V+AN + H EA+ RLVE + L L +EA Sbjct: 179 KEMNIGRYYQRANQPLAALNRYKAVIANPEFQRTSHTPEALYRLVEVNLQLGLKEEATRN 238 Query: 250 VSLIQERYPQGYWARYVETLV 270 +++ +P W L+ Sbjct: 239 GAVLGYNFPGSPWYAEAYALL 259 >gi|254179572|ref|ZP_04886171.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 1655] gi|184210112|gb|EDU07155.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 1655] Length = 274 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + T ++Y +A L ++ K +YF PF A+++ Sbjct: 27 GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 82 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146 + A+ + + A + +I +P+ +V Y YYL GM + Sbjct: 83 QINVAYCNWKDNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 142 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A + +V+RY S Y A + N LA+ EV YY +RG Y Sbjct: 143 MSERDPQALRESYDAFKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 VAAI R QL + Y +A E+A+ ++ +Y L A + ++ +P + Sbjct: 203 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F +P + A + + +A Y G Y A + + I +Y Sbjct: 158 FKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 217 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SYA++ + +L + + +SPYV Sbjct: 218 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 260 >gi|121599824|ref|YP_993133.1| competence lipoprotein ComL [Burkholderia mallei SAVP1] gi|124384405|ref|YP_001026091.1| competence lipoprotein ComL [Burkholderia mallei NCTC 10229] gi|126449169|ref|YP_001080639.1| competence lipoprotein ComL [Burkholderia mallei NCTC 10247] gi|167002221|ref|ZP_02268011.1| competence lipoprotein ComL [Burkholderia mallei PRL-20] gi|238562639|ref|ZP_00440110.2| competence lipoprotein ComL [Burkholderia mallei GB8 horse 4] gi|254178609|ref|ZP_04885264.1| competence lipoprotein ComL [Burkholderia mallei ATCC 10399] gi|254199930|ref|ZP_04906296.1| competence lipoprotein ComL [Burkholderia mallei FMH] gi|254206263|ref|ZP_04912615.1| competence lipoprotein ComL [Burkholderia mallei JHU] gi|254358322|ref|ZP_04974595.1| competence lipoprotein ComL [Burkholderia mallei 2002721280] gi|121228634|gb|ABM51152.1| competence lipoprotein ComL [Burkholderia mallei SAVP1] gi|124292425|gb|ABN01694.1| competence lipoprotein ComL [Burkholderia mallei NCTC 10229] gi|126242039|gb|ABO05132.1| competence lipoprotein ComL [Burkholderia mallei NCTC 10247] gi|147749526|gb|EDK56600.1| competence lipoprotein ComL [Burkholderia mallei FMH] gi|147753706|gb|EDK60771.1| competence lipoprotein ComL [Burkholderia mallei JHU] gi|148027449|gb|EDK85470.1| competence lipoprotein ComL [Burkholderia mallei 2002721280] gi|160699648|gb|EDP89618.1| competence lipoprotein ComL [Burkholderia mallei ATCC 10399] gi|238522243|gb|EEP85689.1| competence lipoprotein ComL [Burkholderia mallei GB8 horse 4] gi|243062039|gb|EES44225.1| competence lipoprotein ComL [Burkholderia mallei PRL-20] Length = 274 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + T ++Y +A L ++ K +YF PF A+++ Sbjct: 27 GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 82 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146 + A+ + + A + +I +P+ +V Y YYL GM + Sbjct: 83 QINVAYCNWKDNETATADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 142 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A + +V+RY S Y A + N LA+ EV YY +RG Y Sbjct: 143 MSERDPQALRESYDAFKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 VAAI R QL + Y +A E+A+ ++ +Y L A + ++ +P + Sbjct: 203 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F +P + A + + +A Y G Y A + + I +Y Sbjct: 158 FKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 217 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SYA++ + +L + + +SPYV Sbjct: 218 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 260 >gi|53723512|ref|YP_102985.1| competence lipoprotein ComL [Burkholderia mallei ATCC 23344] gi|52426935|gb|AAU47528.1| competence lipoprotein ComL [Burkholderia mallei ATCC 23344] Length = 280 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + T ++Y +A L ++ K +YF PF A+++ Sbjct: 33 GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 88 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146 + A+ + + A + +I +P+ +V Y YYL GM + Sbjct: 89 QINVAYCNWKDNETATADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 148 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A + +V+RY S Y A + N LA+ EV YY +RG Y Sbjct: 149 MSERDPQALRESYDAFKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 208 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 VAAI R QL + Y +A E+A+ ++ +Y L A + ++ +P + Sbjct: 209 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 264 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F +P + A + + +A Y G Y A + + I +Y Sbjct: 164 FKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 223 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SYA++ + +L + + +SPYV Sbjct: 224 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 266 >gi|262170004|ref|ZP_06037694.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio cholerae RC27] gi|262021738|gb|EEY40449.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio cholerae RC27] Length = 241 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 15/228 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 SS DV D ++Y +A L+ + A E +PF + + L Sbjct: 17 GCSSSPDVVPDVPP-----SQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQL 71 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148 + Y + E + P + +D+V Y+ G+++ R+ Sbjct: 72 DLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRR 131 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D K ++++RY NSPY + A+ + +N+LA ++ +YL+R ++A Sbjct: 132 DRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIA 191 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 AI R Q + Y D E A +++ +EAY L L D L+Q Sbjct: 192 AINRTQELQKTYPDTEAARQSLEIQLEAYQQLGLTDAVERTKQLMQLN 239 >gi|319763345|ref|YP_004127282.1| outer membrane assembly lipoprotein yfio [Alicycliphilus denitrificans BC] gi|330825579|ref|YP_004388882.1| outer membrane assembly lipoprotein YfiO [Alicycliphilus denitrificans K601] gi|317117906|gb|ADV00395.1| outer membrane assembly lipoprotein YfiO [Alicycliphilus denitrificans BC] gi|329310951|gb|AEB85366.1| outer membrane assembly lipoprotein YfiO [Alicycliphilus denitrificans K601] Length = 265 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 10/224 (4%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 + T ++Y +A L + KA + +A+++ L A+ QY Sbjct: 25 PEDKTAGWSTDKIYAEARDELNGGAYDKAVPLLEKLEGRAAGTPLAQQAQLEKAYAQYKG 84 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ----------MIRDVPYDQRATKL 157 G+ QA + + ++ +P S +DY YL G+ DQ+A K Sbjct: 85 GEKAQAIATLDRFMKLHPASPALDYALYLKGLVNFNENLGLFSWLSRQDLSERDQKAAKD 144 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + +V R+ S Y AR +T N LA EV + RYY +RG YVAAI R Q + Sbjct: 145 SFESFRELVTRFPESRYTPDARLRMTYIVNSLAQYEVHVARYYYQRGAYVAAISRAQSAI 204 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Y D EEA+ LV +Y AL + + ++Q YP Sbjct: 205 TDYKDVPATEEALYILVRSYDALGMTQLRDDAQRVLQASYPNSS 248 >gi|126438751|ref|YP_001059204.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 668] gi|126218244|gb|ABN81750.1| putative competence lipoprotein ComL [Burkholderia pseudomallei 668] Length = 274 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + T ++Y +A L ++ K +YF PF A+++ Sbjct: 27 GCHGLPQKSDE----TATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 82 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146 + A+ + + A + +I +P+ +V Y YYL GM + Sbjct: 83 QINVAYCNWKDNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQD 142 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A + +V+RY S Y A + N LA+ EV YY +RG Y Sbjct: 143 MSERDPQALRESYDAFKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 VAAI R QL + Y +A E+A+ ++ +Y L A + ++ +P + Sbjct: 203 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F +P + A + + +A Y G Y A + + I +Y Sbjct: 158 FKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKEYK 217 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SYA++ + +L + + +SPYV Sbjct: 218 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 260 >gi|312796111|ref|YP_004029033.1| lipoprotein, ComL family [Burkholderia rhizoxinica HKI 454] gi|312167886|emb|CBW74889.1| Lipoprotein, ComL family [Burkholderia rhizoxinica HKI 454] Length = 276 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 97/236 (41%), Gaps = 14/236 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + T +++Y +A ++ K +YF PF A+++ Sbjct: 26 GCHGLPEKTDE----TAAWTNQKLYSEAQDAFTAGDWGKCSKYFELLQGRDPFGHFAQQA 81 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146 + A+ Q+ + A + +I +P+ ++ Y YYL G+ Sbjct: 82 QINVAYCQWKDNETAAAEQAVDRFIQLHPDHPDIAYAYYLKGLISFNDDLGLFGRFAGQD 141 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A + +VE+Y +S Y A + N LA+ EV YY +RG Y Sbjct: 142 MSERDPKALRDSYDAFRVVVEKYPSSKYAPDAAQRMRYIVNALASHEVHTADYYYRRGAY 201 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 VAAI R QLVL Y +A E+A+ ++ +Y AL A + ++ +P + Sbjct: 202 VAAINRAQLVLKEYKNAPATEDALHVMILSYRALNQPQLADDTQRVLTSTFPDSPY 257 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 35/111 (31%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F +P + A + + +A Y G Y A + + + +Y Sbjct: 157 FRVVVEKYPSSKYAPDAAQRMRYIVNALASHEVHTADYYYRRGAYVAAINRAQLVLKEYK 216 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + + +++ +SY +L + + +SPYV Sbjct: 217 NAPATEDALHVMILSY--------RALNQPQLADDTQRVLTSTFPDSPYVT 259 >gi|157964248|ref|YP_001499072.1| DNA uptake lipoprotein [Rickettsia massiliae MTU5] gi|157844024|gb|ABV84525.1| DNA uptake lipoprotein [Rickettsia massiliae MTU5] Length = 251 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 69/242 (28%), Positives = 125/242 (51%), Gaps = 6/242 (2%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 + L G + + D + + +Y + + L+++ + KA E F + P Sbjct: 12 VIGLVLGGCTNKKNSDDIVVPMP------TLYNEGITLLEKKKYKKAAEEFGRVFYQHPG 65 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL +SY +I DV Sbjct: 66 NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFINLHPANVDIAYAYYLKALSYYMLISDVN 125 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 +DQ T L ++ ++ N+ Y + + + + LA KE+ +GR+YLK+ +AA Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAA 185 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 I RF+ V+ NY H+ EA+ RL E+Y+ L L DEA++ S++ YP W Y L Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLAESYMMLGLPDEAKKYASVLGYNYPDSQWYSYAYRL 245 Query: 270 VK 271 V+ Sbjct: 246 VQ 247 >gi|221067307|ref|ZP_03543412.1| outer membrane assembly lipoprotein YfiO [Comamonas testosteroni KF-1] gi|220712330|gb|EED67698.1| outer membrane assembly lipoprotein YfiO [Comamonas testosteroni KF-1] Length = 271 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 64/250 (25%), Positives = 104/250 (41%), Gaps = 17/250 (6%) Query: 19 LYKFALTIFFS-IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + + +LT+ + + L G D T +Y +A + KA Sbjct: 9 MPRISLTLVPAVLIAATLAGCSSTK------DDPTAKWTPERIYTEARDESSSGAYDKAV 62 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 F + +A+++ L A+ QY AG+ QA + + + +P S +DY YL Sbjct: 63 PLFEKLEGRAAGTPLAQQAQLEKAYAQYKAGEKVQALATLDRFTKLHPASPAMDYALYLK 122 Query: 138 GMSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+ DQ+A K + +V R+ +S Y AR + N Sbjct: 123 GLVNFNDNLGMFGWLTRQDLSERDQKAAKDSFESFRELVTRFPDSKYSDDARQRMQYIVN 182 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 LA EV + RYY RG YVAAI R Q + +Y + EAM LV++Y AL + Sbjct: 183 SLAQYEVHVARYYYSRGAYVAAIARAQTAIKDYQNVPSVREAMVILVKSYDALGMTQLRD 242 Query: 248 EVVSLIQERY 257 + ++++ Y Sbjct: 243 DAKRVLEQSY 252 >gi|237748963|ref|ZP_04579443.1| competence lipoprotein ComL [Oxalobacter formigenes OXCC13] gi|229380325|gb|EEO30416.1| competence lipoprotein ComL [Oxalobacter formigenes OXCC13] Length = 266 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 14/253 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K+ + I + + T ++Y +A L N+ KA E Sbjct: 1 MRKYLTILLACIIALSISACGLLPEKIDE----TASWPAGKLYREAKEELNSGNYEKAVE 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 YF + +PF A+++ + A+ Y + QA + E +I +P N+DY+YYL G Sbjct: 57 YFEKLEARYPFGIYAQQAQMDIAYAYYRQNEQAQALAAAERFIKLHPNHPNIDYMYYLKG 116 Query: 139 MSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + D +A + +V RY +S Y K A + Sbjct: 117 LINFNDRLGLLNFAFRQDLSERDPKAAQDAFDAFKVLVTRYPDSVYAKDAMLRMKYLVTM 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + +YY +RG Y+AA R Q + NY ++ EEA+ + ++Y L L D + + Sbjct: 177 LAKYEIHVAKYYYRRGAYLAAANRAQRTIKNYPESHVVEEALYIMAQSYKKLGLYDLSAD 236 Query: 249 VVSLIQERYPQGY 261 + ++ YP Sbjct: 237 AERVFKQNYPDSK 249 >gi|307729590|ref|YP_003906814.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. CCGE1003] gi|307584125|gb|ADN57523.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. CCGE1003] Length = 286 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 10/221 (4%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T ++Y +A L ++ K +YF PF A+++ + A+ + + Sbjct: 50 TATWNNNKLYTEANDALNGGDYGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNETA 109 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATKLMLQY 161 A + +I +P+ ++ Y YYL GM + D ++ + Sbjct: 110 AADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLRESYDA 169 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 +V+RY NS Y A + N LA+ EV YY +RG YVAAI R QL L Y Sbjct: 170 FKVVVDRYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALKEYK 229 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 +A E+A+ ++ +Y L A + ++ +P + Sbjct: 230 NAPAIEDALHIMMLSYEKLNQPQLADDTKRVLAGTFPDSPY 270 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F +P + A + + +A Y G Y A + + + +Y Sbjct: 170 FKVVVDRYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALKEYK 229 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SY ++ + +L + + +SPYV Sbjct: 230 NAPAIEDALHIMMLSYEKLNQ--------PQLADDTKRVLAGTFPDSPYVT 272 >gi|83648562|ref|YP_436997.1| DNA uptake lipoprotein [Hahella chejuensis KCTC 2396] gi|83636605|gb|ABC32572.1| DNA uptake lipoprotein [Hahella chejuensis KCTC 2396] Length = 275 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 66/245 (26%), Positives = 107/245 (43%), Gaps = 19/245 (7%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 +F +A L + V ++E Y+KA L NF +A + Sbjct: 6 ALFAMLAFVLLTACAS---------APPQVLSEKEYYDKAKSALDSGNFLEAARHLEDLE 56 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 PF A ++ L + Y++ ++A S E +I +PES +VDY YY+ G++ Sbjct: 57 TYHPFGRYAEQAQLDLIYAHYNSLNPERAESAAERFIRLHPESPHVDYAYYIKGLAAYYA 116 Query: 145 ----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 I D K + S +V + +SPY A + + +LA E+ Sbjct: 117 DLGLGPRFLPIDVNSRDPGRAKEAFRDFSTLVTNFPDSPYAADAEKRMLAIKERLAQYEM 176 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 + RYY++R YVAA+ R Q V+ NY D EA++ +VE Y L + A + + L+ Sbjct: 177 HVARYYIRRQAYVAAVARAQYVVENYPDTPVVPEALSLMVELYRYLGMQRHADDALVLLA 236 Query: 255 ERYPQ 259 YP Sbjct: 237 ASYPD 241 >gi|255743835|ref|ZP_05417791.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio cholera CIRS 101] gi|262156054|ref|ZP_06029173.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio cholerae INDRE 91/1] gi|262191806|ref|ZP_06049977.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio cholerae CT 5369-93] gi|18203202|sp|Q9KU21|Y708_VIBCH RecName: Full=UPF0169 lipoprotein VC_0708; Flags: Precursor gi|255738466|gb|EET93855.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio cholera CIRS 101] gi|262030090|gb|EEY48735.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio cholerae INDRE 91/1] gi|262032293|gb|EEY50860.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio cholerae CT 5369-93] gi|327483505|gb|AEA77912.1| Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Vibrio cholerae LMA3894-4] Length = 241 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 15/228 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 SS DV D ++Y +A L+ + A E +PF + + L Sbjct: 17 GCSSSPDVVPDVPP-----SQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQL 71 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148 + Y + E + P + +D+V Y+ G+++ R+ Sbjct: 72 DLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRR 131 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D K ++++RY NSPY + A+ + +N+LA ++ +YL+R ++A Sbjct: 132 DRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIA 191 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 AI R Q + Y D E A +++ +EAY L L D L+Q Sbjct: 192 AINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLN 239 >gi|56460292|ref|YP_155573.1| competence lipoprotein ComL [Idiomarina loihiensis L2TR] gi|56179302|gb|AAV82024.1| Competence lipoprotein ComL [Idiomarina loihiensis L2TR] Length = 256 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 56/247 (22%), Positives = 112/247 (45%), Gaps = 15/247 (6%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 +F S+ L G QS + + + +Y++A + N + A E + + Sbjct: 10 LVFSSVLGLMLAGCSSQSDEEQVSKTQIEY-----LYDQAQESMANGNLNLAQEQLSSLN 64 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + +PF A + L ++ Y +A + + +I+ P K+VDY Y+ G+ + Sbjct: 65 KRYPFGPFAHQIQLDLIYLHYKLDNTDEALAAIDRFISLNPNHKDVDYALYMRGLVNQRA 124 Query: 145 ----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 + D + + + +V +Y S Y A+ + +++LA KE+ Sbjct: 125 EHNAIHNLAGVDRSDRDSSMAQAAFKDFAELVRKYPKSEYAADAKKRLIALKSRLAKKEL 184 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 I +YY++R Y+AA R + VL ++SD E A+A +VE+Y L L + + + +++ Sbjct: 185 AIAQYYMERQAYLAAANRGRYVLEHFSDTPEVENALAIMVESYDQLELPELREDAMKVLR 244 Query: 255 ERYPQGY 261 +P+ Sbjct: 245 ANFPENQ 251 >gi|54310132|ref|YP_131152.1| hypothetical protein PBPRA3022 [Photobacterium profundum SS9] gi|46914571|emb|CAG21350.1| conserved hypothetical protein [Photobacterium profundum SS9] Length = 242 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 96/243 (39%), Gaps = 17/243 (6%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LTI +AV L G S+ +V D E+Y A L+ +++ A E Sbjct: 4 LTITTLLAVAILSGCS--STEEVVPDVPP-----AELYVTAQQALQSGSWTTAIERLETL 56 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF + + L + Y + + P + D+V Y+ G++ Sbjct: 57 DSRYPFGAYSEQVQLDLIYAYYKNDDLALGEATIARFNRLNPAHEKSDWVLYMRGLTQMA 116 Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 R D + + R+++RY NS Y A+ + +N+LA + Sbjct: 117 QDRSFMHDIFSIDRHDRDPEPARKAFRDFKRLLDRYPNSQYAADAKARMIFIKNRLADYD 176 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +Y++R ++AAI R Q + Y D + A +++ ++ AY L L + LI Sbjct: 177 LATVDFYIRREAWIAAINRSQQIQKLYPDTQAARKSLPLMLTAYEKLGLQEPIENTKKLI 236 Query: 254 QER 256 Sbjct: 237 ALN 239 >gi|241763388|ref|ZP_04761443.1| outer membrane assembly lipoprotein YfiO [Acidovorax delafieldii 2AN] gi|241367430|gb|EER61741.1| outer membrane assembly lipoprotein YfiO [Acidovorax delafieldii 2AN] Length = 265 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 10/227 (4%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 + T +Y +A L F KA + +A+++ L A+ QY Sbjct: 25 PEDKTAGWSPNRIYSEAKDELGSGAFDKAVPLLEKLEGRAAGTPLAQQAQLDKAYAQYKG 84 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ----------MIRDVPYDQRATKL 157 G+ QA + + +I +P S +DY YL G+ DQ+A K Sbjct: 85 GEKAQAIATLDRFIKLHPASPALDYALYLKGLVNFNDNLGLFSWVSQQDLSERDQKAAKD 144 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + +S +V R+ +S Y K AR +T N LA EV + RYY +RG YVAAI R Q L Sbjct: 145 SFESLSELVTRFPDSRYAKDARQRMTYIVNSLAQYEVHVARYYYERGAYVAAIGRAQSAL 204 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 A+Y EEA+ L+++Y AL + + +++ YPQG A+ Sbjct: 205 ADYQGVPALEEALYILMQSYDALGMTQLRDDTRRVMEASYPQGALAK 251 >gi|331004933|ref|ZP_08328346.1| putative component of the lipoprotein assembly complex [gamma proteobacterium IMCC1989] gi|330421257|gb|EGG95510.1| putative component of the lipoprotein assembly complex [gamma proteobacterium IMCC1989] Length = 306 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 111/249 (44%), Gaps = 16/249 (6%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K L + F+ G S+T+ + E+YE+ LK NF A +Y Sbjct: 13 KRHLFFILVVLSVFIGGCTANQ------LSLTNFGTEAELYEQVQKDLKRDNFLDAIKYL 66 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM- 139 + FPF ++ + L + Y + + A + +I +P+ +NVDY YY+ G+ Sbjct: 67 QLMEKKFPFGEYSKSAQLSLIYAHYGFDQKESATASANRFIRLHPQHRNVDYAYYMKGLI 126 Query: 140 ------SYAQMIRDVP---YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 ++ Q +V D A + + S +V+ + S Y A +T N LA Sbjct: 127 SFPDAKTFLQQFFNVDLSKRDISAARSSFNHFSTLVKLFPESEYAPDALKRMTFLHNLLA 186 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 E+ + YYL+R ++AA R + V+ N+ + +A+A +++ Y + + D A + Sbjct: 187 RHEIHVANYYLERKAFLAAANRGRYVVENFQETSAIPDALAVMIQGYHEMKMHDLAENSL 246 Query: 251 SLIQERYPQ 259 +++ +P Sbjct: 247 EVLRTNFPN 255 >gi|291614497|ref|YP_003524654.1| outer membrane assembly lipoprotein YfiO [Sideroxydans lithotrophicus ES-1] gi|291584609|gb|ADE12267.1| outer membrane assembly lipoprotein YfiO [Sideroxydans lithotrophicus ES-1] Length = 264 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 58/247 (23%), Positives = 105/247 (42%), Gaps = 20/247 (8%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + +L +F + LV S++ E+Y KA ++++N+ KA + F Sbjct: 2 RHSLAVFLLL---TLVACSSDPSKEGQN------LTADELYAKAQASMQDENYEKAVKQF 52 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 +P+ A+++ + A+ Y + A + + + YP S ++DYV YL G+ Sbjct: 53 ETLQSRYPYGRYAQQAQMEIAYAYYKHSEPAPAIAALDHFAKMYPMSTHLDYVLYLKGLI 112 Query: 141 YAQ-----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 D A + +V R+ +S Y A+ + N L Sbjct: 113 NFNENINSLFGTMFKQDPSERDPSALRESFNSFKELVTRFPDSKYAPDAKLRMQYLLNSL 172 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A+ E+ I YYL+RG YVAA R + VL ++ + EA+ LV+AY A+ + + Sbjct: 173 ASSEIHIASYYLRRGAYVAAANRAKSVLIDFPNTPQTREALQILVQAYDAMGMEVLRDDT 232 Query: 250 VSLIQER 256 ++ Sbjct: 233 QRVLSLN 239 >gi|254426918|ref|ZP_05040625.1| outer membrane assembly lipoprotein YfiO [Alcanivorax sp. DG881] gi|196193087|gb|EDX88046.1| outer membrane assembly lipoprotein YfiO [Alcanivorax sp. DG881] Length = 272 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 17/247 (6%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 + V L G L Y +A ++ +N+ A + + FP Sbjct: 8 LLCVLILAGCAGNPEDRPELTEADQ-------YREASESIESKNYLTAIDQLKELEARFP 60 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---- 144 + A +S L + QY + Y + ++ YP +DY Y+ G++ M Sbjct: 61 YGDYAEQSALDLIYAQYKSVDYPATVVAAQRFMRNYPAHPRMDYALYMRGLANFNMEKGL 120 Query: 145 ------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D A K + R+V R+ +S Y AR + RNQLA +E+ + R Sbjct: 121 FDNMVTSDRSSKDMDAAKDAFRDFERLVARFPDSEYSPDARARMVHIRNQLARQELHVAR 180 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YY +RG VA+I R Q V+ +Y EE +A + + Y L L ++A + +++ +P Sbjct: 181 YYARRGAIVASINRAQYVVKHYQQTPAVEEGLAIMTKGYQRLELPEQAEKSRAVLALNWP 240 Query: 259 QGYWARY 265 + Sbjct: 241 DSAFLDD 247 >gi|326316816|ref|YP_004234488.1| outer membrane assembly lipoprotein YfiO [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373652|gb|ADX45921.1| outer membrane assembly lipoprotein YfiO [Acidovorax avenae subsp. avenae ATCC 19860] Length = 265 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 16/241 (6%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 L G + T +Y +A L ++ KA F + +A Sbjct: 17 VLAGCSSTTEDK------TAGWSPNRIYSEARDELNSNSYDKAVPLFEKLEGRAAGTPLA 70 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ---------- 143 +++ L A+ QY G+ QA + + ++ +P S DY YL G+ Sbjct: 71 QQAQLEKAYAQYKGGEKAQAIATLDRFMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLS 130 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 DQ+A K + +V R+ +S Y + A+ +T N LA EV + RYY +R Sbjct: 131 RQDLSERDQKAAKDSFESFRELVTRFPDSRYARDAQQRMTYIVNSLAQYEVHVARYYYQR 190 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 G YVAAI R Q+ LA+Y D EEA+ L+++Y AL + + ++ YPQ + Sbjct: 191 GAYVAAINRAQIALADYKDVPALEEALYILIKSYDALGMTQLRDDAQRVMAASYPQSEYM 250 Query: 264 R 264 R Sbjct: 251 R 251 >gi|90580376|ref|ZP_01236183.1| hypothetical protein VAS14_20631 [Vibrio angustum S14] gi|90438678|gb|EAS63862.1| hypothetical protein VAS14_20631 [Vibrio angustum S14] Length = 242 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 17/243 (6%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LTI +AV L G SS++ + V +Y A L++ N++ A E Sbjct: 4 LTITTLLAVALLSGC---SSKEEVIPDVP----PSNLYATAQTALQKGNWTSAIEQLEAL 56 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF + + L + Y + + E ++ P++ D+V Y+ G+++ Sbjct: 57 DSRYPFGAYSDQVQLDLIYAYYKSDDLALGEATIERFLRLNPDNPQADWVVYMRGLTHMA 116 Query: 144 MIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 R D ++ + ++ERY S Y A+ + +N+LA + Sbjct: 117 QDRSFMHDMFNINRFDRDPTPSRQAFKDFKYLLERYPESEYGADAKARMIFLKNRLANYD 176 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +Y++R ++AAI R Q + Y D E A +++A AY L L E L+ Sbjct: 177 LSTADFYIRREAWIAAINRCQQIQRLYPDTEAARQSLALEKTAYEKLNLQKEVERTDKLM 236 Query: 254 QER 256 + Sbjct: 237 KLN 239 >gi|253689513|ref|YP_003018703.1| outer membrane assembly lipoprotein YfiO [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756091|gb|ACT14167.1| outer membrane assembly lipoprotein YfiO [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 244 Score = 248 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 54/230 (23%), Positives = 97/230 (42%), Gaps = 16/230 (6%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G S+D DS E+Y A L++ NF A +PF +++ Sbjct: 19 GCSSN-SKDAVPDSPP-----SEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQV 72 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-------- 148 L + Y + + A + + ++ P NVDYV Y+ G++ + Sbjct: 73 QLDLIYAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVD 132 Query: 149 --PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D + + + S++++ Y NS Y A + + +LA E+ + +YY KR Y Sbjct: 133 RSDRDPQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRSAY 192 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 VA + R + +L +Y D + + A+ + AY L L +A +V +I Sbjct: 193 VAVVNRVEQMLRDYPDTQATKTALPLMENAYRELQLAAQADKVAKVIAAN 242 >gi|90414901|ref|ZP_01222866.1| hypothetical protein P3TCK_25174 [Photobacterium profundum 3TCK] gi|90324015|gb|EAS40609.1| hypothetical protein P3TCK_25174 [Photobacterium profundum 3TCK] Length = 242 Score = 248 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 96/243 (39%), Gaps = 17/243 (6%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LTI +AV L G S+ +V D E+Y A L+ +++ A E Sbjct: 4 LTITTLLAVAILSGCS--STEEVVPDIPP-----AELYVTAQQALQSGSWTTAIERLETL 56 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF + + L + Y + + P + D+V Y+ G++ Sbjct: 57 DSRYPFGAYSEQVQLDLIYAYYKNDDLALGEATIARFNRLNPAHEKSDWVLYMRGLTQMA 116 Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 R D + + R+++RY NS Y A+ + +N+LA + Sbjct: 117 QDRSFMHDIFSIDRHDRDPEPARKAFRDFKRLLDRYPNSQYAADAKARMIFIKNRLADYD 176 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +Y++R ++AAI R Q + Y D + A +++ ++ AY L L + LI Sbjct: 177 LATVDFYIRREAWIAAINRSQQIQRLYPDTQAARKSLPLMLTAYEKLGLQEPIENTKKLI 236 Query: 254 QER 256 Sbjct: 237 ALN 239 >gi|256822305|ref|YP_003146268.1| outer membrane assembly lipoprotein YfiO [Kangiella koreensis DSM 16069] gi|256795844|gb|ACV26500.1| outer membrane assembly lipoprotein YfiO [Kangiella koreensis DSM 16069] Length = 268 Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 106/260 (40%), Gaps = 11/260 (4%) Query: 10 CIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK 69 + + K ++ + + F G + + +E+++ A ++ Sbjct: 4 AEHKQKELNMQKHSIIVLALLVFSF-AGCSSTPKEPDLNKTKVESMAAQELFDGAKRSMR 62 Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 N+ +A E + +PF ++ ++ L + + Y+ +L + ++ Q+P+ +N Sbjct: 63 NGNYVRATELLEEIDTRYPFGRISEQAKLELIYAYFKRADYESGQALADRFLRQHPQHEN 122 Query: 130 VDYVYYLVGMSYAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 DYVYY+ G+ + + D K +VE Y S Y AR Sbjct: 123 ADYVYYMKGVMHYEQEVGTFKEVFSADIEKRDTSNIKAAFDNFKALVEVYPESEYAPDAR 182 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + RN LA E+ + RYY++R Y+ A R + ++ N+ A+ L+ +Y Sbjct: 183 KRMIQIRNLLADYELHVARYYMQRDSYIGAANRAKYIVENFPKTPAVPSALEILINSYKI 242 Query: 240 LALMDEAREVVSLIQERYPQ 259 L L + + E ++ YP Sbjct: 243 LELPEISEEYRKVLLLNYPD 262 >gi|119946872|ref|YP_944552.1| putative lipoprotein [Psychromonas ingrahamii 37] gi|119865476|gb|ABM04953.1| putative lipoprotein [Psychromonas ingrahamii 37] Length = 257 Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 58/253 (22%), Positives = 114/253 (45%), Gaps = 15/253 (5%) Query: 19 LYKFALTIFFSIAVCFLV-GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + K I S+ + L G + + +D + +YE+A L+ +F KA Sbjct: 1 MKKILRLITSSLMIVLLSTGCSSKKAEKPKVDD----KPPMVLYEQAKQALESASFEKAS 56 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + +PF + + L + Y G+ + + ++ P ++DY+YY+ Sbjct: 57 DILEALDTRYPFGPHSDQVQLDLIYAYYKRGETAFTLANIDRFLRLNPTHPDLDYIYYMR 116 Query: 138 GMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G++Y I D + +SRI++ Y +S Y A+ + ++ Sbjct: 117 GLTYISADQQFFQDLFGIDRYNRDPNNAIQAFKDLSRIIKYYPSSEYAVDAQQRIIDLKD 176 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 +LA E+ I ++YLKR Y+AAI R ++VL NY D E+A+ ++ +Y L + + Sbjct: 177 RLARYEIGIAQWYLKREAYIAAINRCKIVLNNYPDMPAVEQALEIMIASYNVLGIEEPKM 236 Query: 248 EVVSLIQERYPQG 260 +++++ YP+ Sbjct: 237 NALAVLKLNYPKN 249 >gi|85711026|ref|ZP_01042086.1| Competence lipoprotein ComL [Idiomarina baltica OS145] gi|85694939|gb|EAQ32877.1| Competence lipoprotein ComL [Idiomarina baltica OS145] Length = 252 Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 14/251 (5%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K + I + L G + L +YE A + NF++A E Sbjct: 2 KRRILILTAAVGLSLAGCSSTDDQQSELK----YTQVELMYESAQDQMSLGNFTQAEEEL 57 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + + +PF A + L ++ Y ++A + + +I+ P K+VDY Y+ G++ Sbjct: 58 SNINSRYPFGPFAHQVQLDLIYLNYKLDNTEKALAAIDRFISLNPNHKDVDYALYMRGLT 117 Query: 141 YAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 + + D K + + ++ +Y S Y A+ + +++LA Sbjct: 118 NQRAEYNAIHELAGVDRSDRDSTMAKEAFKDFAELLRKYPESKYAADAKKRMIAIKSRLA 177 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 KE+ + +YY+KR Y+AA R + V+ N+ + E A+A +VE Y L L + ++ + Sbjct: 178 KKELAVAQYYMKRQAYLAAANRGRYVVENFENTPEVESALAMMVECYDQLELEELKQDTL 237 Query: 251 SLIQERYPQGY 261 +++ +P Sbjct: 238 KVLRSNFPNNE 248 >gi|209522217|ref|ZP_03270854.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. H160] gi|209497346|gb|EDZ97564.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. H160] Length = 286 Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 10/221 (4%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T ++Y +A L ++ K +YF PF A+++ + A+ + + Sbjct: 50 TATWNNNKLYTEANDALTGGDWGKCAKYFELLEGRDPFGHFAQQAQINVAYCNWKDNENA 109 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATKLMLQY 161 A + +I +P+ ++ Y YYL GM + D ++ + Sbjct: 110 AADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLRESYDA 169 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 +V+R+ NS Y A + N LA+ EV YY +RG YVAAI R QL L +Y Sbjct: 170 FKVVVDRFPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALRDYK 229 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 +A E+A+ ++ +Y L A + ++ +P + Sbjct: 230 NAPAIEDALHIMILSYEKLNNQQLADDTRRVLAGTFPDSPY 270 Score = 42.8 bits (100), Expect = 0.056, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F FP + A + + +A Y G Y A + + + Y Sbjct: 170 FKVVVDRFPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALRDYK 229 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SY ++ +L + + +SPYV Sbjct: 230 NAPAIEDALHIMILSYEKLNNQ--------QLADDTRRVLAGTFPDSPYVT 272 >gi|262401595|ref|ZP_06078161.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio sp. RC586] gi|262352012|gb|EEZ01142.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio sp. RC586] Length = 240 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 10/218 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 V E+Y +A L+ ++ A E +PF + + L + Y Sbjct: 22 PEVVPDVPPSELYSEAQTALQSGSWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKND 81 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158 + E + P + +D+V Y+ G+++ R+ D K Sbjct: 82 DLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNVDRSDRDPEPVKSA 141 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++++RY NSPY + A+ + +N+LA ++ +YL+R ++AAI R Q + Sbjct: 142 FADFKKLLQRYPNSPYAEDAQRRMYALKNRLAEYDLATADFYLRREAWIAAINRTQELQK 201 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 Y D E A +A+ +EAY L + + L++ Sbjct: 202 TYPDTEAARKALDIQLEAYQQLGMTEAVERTKQLMKLN 239 >gi|239948179|ref|ZP_04699932.1| DNA uptake lipoprotein [Rickettsia endosymbiont of Ixodes scapularis] gi|239922455|gb|EER22479.1| DNA uptake lipoprotein [Rickettsia endosymbiont of Ixodes scapularis] Length = 249 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 74/242 (30%), Positives = 129/242 (53%), Gaps = 7/242 (2%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 I + F +++S D+ + T +Y + V L+++ + KA E F + P Sbjct: 13 IGLVFSGCKSKKNSDDIVVPIPT-------LYNEGVTLLEKKKYKKAAEEFGRVFYQHPG 65 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL +SY +I DV Sbjct: 66 NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFINLHPANVDITYAYYLKALSYYMLISDVN 125 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 +DQ T L ++ ++ N+ Y + + + + LA KE+ +GR+YLK+ +AA Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAA 185 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 I RF+ V+ NY H+ EA+ RLVE+Y+ L L DEA++ S++ YP W Y L Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLVESYMMLGLPDEAKKYASVLGYNYPDSQWYSYAYRL 245 Query: 270 VK 271 VK Sbjct: 246 VK 247 >gi|302879314|ref|YP_003847878.1| outer membrane assembly lipoprotein YfiO [Gallionella capsiferriformans ES-2] gi|302582103|gb|ADL56114.1| outer membrane assembly lipoprotein YfiO [Gallionella capsiferriformans ES-2] Length = 264 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 107/246 (43%), Gaps = 12/246 (4%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + +L +F + + + D + E+Y +A L + +++ A + + Sbjct: 2 RHSLAVFLLLTLTACGILSPLPTGDT--ADTSKSLSAEELYRQAKTELDDGSYNTAIKLY 59 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 +P+ A++S+L A+ Y + A + + +I Q+P + +VDY YY+ G++ Sbjct: 60 ETLQSRYPYGKYAQQSMLEMAYAYYRQSEPDPAIATADRFIKQFPNNAHVDYAYYVKGLA 119 Query: 141 YAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 D +A +V R+ NS Y A+ + N L+ Sbjct: 120 TFNGELSLLSSVAGQDPSERDPQAALESFNAFKALVVRFPNSKYTPDAKLRLQYLVNALS 179 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 E+ + +YYL+RG Y+AA+ R Q ++ Y ++ EA+ +++AY AL ++ + Sbjct: 180 RHEIHVAQYYLRRGAYIAAVNRAQDIIKQYPNSPSTREALQIMIDAYDALGMVQLRDDTK 239 Query: 251 SLIQER 256 + Sbjct: 240 RVQASN 245 Score = 35.5 bits (81), Expect = 8.9, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 27/64 (42%) Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 G Y AI ++ + + Y ++A+++M + AY + D A +++P Sbjct: 50 GSYNTAIKLYETLQSRYPYGKYAQQSMLEMAYAYYRQSEPDPAIATADRFIKQFPNNAHV 109 Query: 264 RYVE 267 Y Sbjct: 110 DYAY 113 >gi|330817149|ref|YP_004360854.1| Putative competence lipoprotein ComL [Burkholderia gladioli BSR3] gi|327369542|gb|AEA60898.1| Putative competence lipoprotein ComL [Burkholderia gladioli BSR3] Length = 281 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + T ++Y +A L ++ K +YF PF A+++ Sbjct: 33 GCHGLPQKTDE----TATWSNNKLYSEAQDALNGSDWGKCAKYFEALQGRDPFGHFAQQA 88 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146 + A+ + + A + +I +P+ ++ Y YYL GM + Sbjct: 89 QINVAYCNWKDNEASAADQAVDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQD 148 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A + +V+RY S Y A + N LA+ EV YY +RG Y Sbjct: 149 MSERDPQALRESYDAFKIVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 208 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 VAAI R QL + Y +A E+A+ +V +Y L A + ++ +P + Sbjct: 209 VAAINRAQLAITQYKNAPAIEDALHIMVLSYGRLNQPQLADDTKRVLASTFPDSPY 264 >gi|258620373|ref|ZP_05715411.1| putative lipoprotein [Vibrio mimicus VM573] gi|258624746|ref|ZP_05719680.1| putative lipoprotein [Vibrio mimicus VM603] gi|262172217|ref|ZP_06039895.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio mimicus MB-451] gi|258583033|gb|EEW07848.1| putative lipoprotein [Vibrio mimicus VM603] gi|258587252|gb|EEW11963.1| putative lipoprotein [Vibrio mimicus VM573] gi|261893293|gb|EEY39279.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio mimicus MB-451] Length = 241 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 93/228 (40%), Gaps = 15/228 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 SS DV D E+Y +A L+ + A E +PF + + L Sbjct: 17 GCSSSPDVVPDVPP-----SELYSEAQSALQSGTWLTAIEKLEALDSRYPFGAYSEQVQL 71 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---------- 148 + Y + E + P + +D+V Y+ G+++ R+ Sbjct: 72 DLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNVDRS 131 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D K ++++RY NSPY + A+ + +N+LA ++ +YL+R ++A Sbjct: 132 DRDPEPVKSAFADFKKLLQRYPNSPYAEDAQRRMYALKNRLAEYDLATADFYLRREAWIA 191 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 AI R Q + + D E A +A+ +EAY L + + L++ Sbjct: 192 AINRTQELQKTFPDTEAARKALDIQLEAYQQLGMTEAVERTEQLMKLN 239 >gi|222111092|ref|YP_002553356.1| outer membrane assembly lipoprotein yfio [Acidovorax ebreus TPSY] gi|221730536|gb|ACM33356.1| outer membrane assembly lipoprotein YfiO [Acidovorax ebreus TPSY] Length = 265 Score = 248 bits (633), Expect = 7e-64, Method: Composition-based stats. Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 10/224 (4%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 + T ++Y +A L ++ KA + +A+++ L A+ QY Sbjct: 25 PEDKTAGWSTDKIYSEARDELNGGSYDKAVPLLEKLEGRAAGTPLAQQAQLEKAYAQYKG 84 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ----------MIRDVPYDQRATKL 157 G+ QA + + ++ +P S DY YL G+ DQ+A K Sbjct: 85 GEKAQAIATLDRFMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLSRQDLSERDQKAAKD 144 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + +V R+ S Y AR +T N LA EV + RYY +RG YVAA+ R Q + Sbjct: 145 SFESFRELVTRFPESRYTPDARQRMTYIVNSLAQYEVHVARYYYERGAYVAAVSRAQSAV 204 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A+Y D EEA+ LV +Y AL L + ++ YPQ Sbjct: 205 ADYKDVPATEEALYILVRSYDALGLTQLRDDTRRVMDASYPQSS 248 >gi|209694253|ref|YP_002262181.1| outer membrane protein [Aliivibrio salmonicida LFI1238] gi|208008204|emb|CAQ78348.1| outer membrane protein [Aliivibrio salmonicida LFI1238] Length = 255 Score = 247 bits (632), Expect = 9e-64, Method: Composition-based stats. Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 10/218 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D V E+Y +A + L+ N++ A E +PF + + L +V Y Sbjct: 36 DDVIPDIPPSELYSQAQISLQAGNWTSAVERLEALDSRYPFGAYSEQVQLDLIYVYYKND 95 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158 + E + P + D+V Y+ G+++ R D + Sbjct: 96 DLALGLATIERFNRLNPTNPKADWVLYMRGLTHMAQDRSFMHDLFRVNRSDRDPEPARSA 155 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + R++ERY +S Y + A+ + +N+LA E+ +YL+R +++AI R Q + Sbjct: 156 FKDFKRLLERYPDSLYAEDAQTRMFALKNRLADYELATADFYLRREAWISAINRSQELQR 215 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 Y D E A +++ ++ AY L L D + LI Sbjct: 216 TYPDTEAARKSLTIMLSAYKELKLDDAIQRTEELIALN 253 >gi|323526135|ref|YP_004228288.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. CCGE1001] gi|323383137|gb|ADX55228.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. CCGE1001] Length = 286 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 10/221 (4%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T ++Y +A L +F K +YF PF A+++ + A+ + + Sbjct: 50 TATWNNNKLYTEANDALNGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNETA 109 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATKLMLQY 161 A + +I +P+ ++ Y YYL GM + D ++ + Sbjct: 110 AADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLRESYDA 169 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 +V++Y NS Y A + N LA+ EV YY +RG YVAAI R QL L Y Sbjct: 170 FKVVVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALKEYK 229 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 +A E+A+ ++ +Y L A + ++ +P + Sbjct: 230 NAPAIEDALHIMMLSYQKLNQPQLADDTKRVLAGTFPDSPY 270 Score = 39.3 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F +P + A + + +A Y G Y A + + + +Y Sbjct: 170 FKVVVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALKEYK 229 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SY ++ + +L + + +SPYV Sbjct: 230 NAPAIEDALHIMMLSYQKLNQ--------PQLADDTKRVLAGTFPDSPYVT 272 >gi|289209196|ref|YP_003461262.1| outer membrane assembly lipoprotein YfiO [Thioalkalivibrio sp. K90mix] gi|288944827|gb|ADC72526.1| outer membrane assembly lipoprotein YfiO [Thioalkalivibrio sp. K90mix] Length = 279 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 10/221 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + T ++Y +A L E N+ +A EY+ + +PF A+++ + + Y A Sbjct: 27 EDPTLGWSASQLYGEAKNALNEGNYDQAVEYYEKLEARYPFGRYAQQAQIEIPYAYYKAR 86 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158 + + A + + +I P N+DY YYL G+ + D + Sbjct: 87 EPEAAIAAVDRFIQLNPRHPNLDYAYYLRGLINFNRQQGFLANLFPRDPAEMDPEPFEQA 146 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 Q R++ + +S Y + + + RN LAA E+ + +Y++R +VA R + VLA Sbjct: 147 FQDFDRLIREFPDSRYAQDSYLRMVYIRNALAAYELRVAEFYMERTAWVAGAERARHVLA 206 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y AE +A+ L AY L L D A + +++ YP Sbjct: 207 TYPGAEVQPQALGVLWRAYTELGLEDYADATMQVLELNYPD 247 >gi|290476242|ref|YP_003469142.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain [Xenorhabdus bovienii SS-2004] gi|289175575|emb|CBJ82378.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain [Xenorhabdus bovienii SS-2004] Length = 244 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 103/248 (41%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + L G +++D D Q ++Y L+E N+ A + Sbjct: 2 MIRMKYLVAAATLSMVLSGCS--NNKDAVPDIP-----QSQIYSAGQKHLQEGNYKGAIK 54 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF ++++ L + Y + ++ A + + ++ P N+DYV YL Sbjct: 55 QLESLDNRYPFGPYSQQTQLDLIYAYYKSAEFPMALASIDRFMRLNPTHPNIDYVIYLRA 114 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + I D + + + +V RY NS Y A + + + Sbjct: 115 LISQALDDNTLQSFFGIDRSDRDPEHARASFRDFNLLVSRYPNSQYTSDAAKRLVFLKER 174 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + +YY KR YVA + R + +L +Y D + EA+ + +Y L LM EA + Sbjct: 175 LAKYELAVVKYYTKRSAYVAVVSRVEQMLRDYPDTQATREALPYMEASYKELGLMAEADK 234 Query: 249 VVSLIQER 256 V LI Sbjct: 235 VAKLIAAN 242 >gi|238027089|ref|YP_002911320.1| putative competence lipoprotein ComL [Burkholderia glumae BGR1] gi|237876283|gb|ACR28616.1| Putative competence lipoprotein ComL [Burkholderia glumae BGR1] Length = 281 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 54/236 (22%), Positives = 95/236 (40%), Gaps = 14/236 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + T ++Y +A L +++ K +YF PF A+++ Sbjct: 33 GCHGLPQKTDE----TATWSNNKLYSEAQDALTGRDWGKCAKYFEALQGRDPFGHFAQQA 88 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146 + A+ + + A + +I +P+ ++ Y YYL GM + Sbjct: 89 QINVAYCNWKDNELTAADQAVDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQD 148 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A + +V+RY S Y A + N LA+ EV YY +RG Y Sbjct: 149 MSERDPQALRESYDAFKIVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 208 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 VAAI R QL + Y +A E+A+ ++ +Y L A + ++ +P + Sbjct: 209 VAAINRAQLAITQYKNAPAIEDALHIMMLSYTRLNQPQLADDTKRVLAATFPDSPY 264 >gi|261212186|ref|ZP_05926472.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio sp. RC341] gi|260838794|gb|EEX65445.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio sp. RC341] Length = 241 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 10/218 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 V E+Y +A L+ + A E +PF + + L + Y Sbjct: 22 PEVVPDVPPSELYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKND 81 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD----------VPYDQRATKLM 158 + E + P + +D+V Y+ G+++ R+ D K Sbjct: 82 DLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNVDRFDRDPEPVKAA 141 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++++RY NSPY + A+ + +N+LA ++ +YL+R ++AAI R Q + Sbjct: 142 FADFKKLLQRYPNSPYAEDAQRRMYALKNRLAEYDLATADFYLRREAWIAAINRTQELQK 201 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 Y D E A +A+ +EAY L L + L+Q Sbjct: 202 TYPDTEAARKALEIQLEAYQQLGLTEAVERTKLLMQLN 239 >gi|257453789|ref|ZP_05619067.1| DNA uptake lipoprotein [Enhydrobacter aerosaccus SK60] gi|257448716|gb|EEV23681.1| DNA uptake lipoprotein [Enhydrobacter aerosaccus SK60] Length = 360 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 15/259 (5%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVY-----LDSVTDVRYQREVYEKAVLFLKE 70 + L K ++A+ L G + + ++ + + + ++ Y+ A +K+ Sbjct: 1 MHHLSKVVGVTAITVALTTLSGCQTLKNSKLFGGKDEVVATKAEKSEQGYYQAASDNIKK 60 Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 N +KA N +P + ++LL + QY G Y A + + +I YP + V Sbjct: 61 GNLAKAISQLNDLRTFYPVGDYSEQALLDLMYAQYQHGDYLDAIASADRFIQSYPSNPQV 120 Query: 131 DYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 DY YY+ G+S Q + D +++ +++ R+ NS Y A Sbjct: 121 DYAYYVRGISNMQAASGGVMKYTKLNPAHRDMGYSRIAFNNFQQLINRFPNSAYAPDAAL 180 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + NQL+ E+++ R+Y+KR YVAA R + V Y +E E++A + +Y L Sbjct: 181 RMRYIYNQLSESEMDVARWYIKRKAYVAAANRAKWVFQYYPQSEAIPESIATIAYSYDKL 240 Query: 241 ALMDEAREVVSLIQERYPQ 259 + D A + L++ YP Sbjct: 241 GMTDTANQYKQLLRINYPG 259 >gi|319794366|ref|YP_004156006.1| outer membrane assembly lipoprotein yfio [Variovorax paradoxus EPS] gi|315596829|gb|ADU37895.1| outer membrane assembly lipoprotein YfiO [Variovorax paradoxus EPS] Length = 268 Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 16/237 (6%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G T +Y +A + KA + + +A++ Sbjct: 22 TGCSSTKEDK------TASWSPNRIYSEAKEESSSGAYDKAVPLYEKLEGRAAGTPLAQQ 75 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV------- 148 + L A+ QY G+ A + + ++ +P S +DY YL G+ + Sbjct: 76 AQLEKAYAQYKGGEKASAIATIDRFMKLHPASPALDYALYLKGVINFNDDLGMFAFLTRQ 135 Query: 149 ---PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 DQ+A K + +V R+ +S Y AR + N LA EV + RYY RG Sbjct: 136 DLSERDQKAAKESFESFRDLVTRFPDSRYAPDARQRMNYIVNSLAQYEVHVARYYYTRGA 195 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 Y+AAI R Q+ LA+Y + EEA+ +V++Y AL + D + ++ YPQ + Sbjct: 196 YLAAINRAQIALADYREVPALEEALYIMVKSYDALGMKDLRDDAQRVLTTNYPQSTY 252 >gi|295676472|ref|YP_003604996.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. CCGE1002] gi|295436315|gb|ADG15485.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. CCGE1002] Length = 286 Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 10/221 (4%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T ++Y +A L ++ K +YF PF A+++ + A+ + + Sbjct: 50 TATWNNNKLYTEANDALTGGDWGKCAKYFELLEGRDPFGHFAQQAQINVAYCNWKDNENA 109 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATKLMLQY 161 A + +I +P+ ++ Y YYL GM + D ++ + Sbjct: 110 AADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLRESYDA 169 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 +V+R+ NS Y A + N LA+ EV YY +RG YVAAI R QL L Y Sbjct: 170 FKVVVDRFPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALREYK 229 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 +A E+A+ ++ +Y L A + ++ +P + Sbjct: 230 NAPAIEDALHIMILSYEKLNNQQLADDTRRVLAGTFPDSPY 270 Score = 42.4 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 38/111 (34%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F FP + A + + +A Y G Y A + + + +Y Sbjct: 170 FKVVVDRFPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALREYK 229 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SY ++ +L + + +SPYV Sbjct: 230 NAPAIEDALHIMILSYEKLNNQ--------QLADDTRRVLAGTFPDSPYVT 272 >gi|149190360|ref|ZP_01868633.1| hypothetical protein VSAK1_14142 [Vibrio shilonii AK1] gi|148835849|gb|EDL52813.1| hypothetical protein VSAK1_14142 [Vibrio shilonii AK1] Length = 241 Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 92/227 (40%), Gaps = 14/227 (6%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 + ++V + V ++Y +A L+ N++ A E +PF + L Sbjct: 17 GCADKEVTVPDVP----PSQLYAEAQESLQGGNWTSAIERLEALDSRYPFGAYTEQVQLD 72 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVP 149 + Y + E + P + D+V Y+ G+++ I Sbjct: 73 LIYAYYKNDDLALGLATIERFSRLNPTHERSDWVLYMRGLTHMAQDRNFMHDILRIDRSD 132 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 D K R+++RY NS Y + A+ + +N+LA ++ +Y++R ++AA Sbjct: 133 RDPEPVKAAFADFDRLLKRYPNSAYAEDAQKRMVALKNRLAKYDLATADFYIRREAWIAA 192 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 I R Q + Y D E A +++ +AY L + ++ L++ Sbjct: 193 INRAQEIQKTYPDTEAARQSLVLQKKAYEELGMQEQVERTEKLMELN 239 >gi|190575602|ref|YP_001973447.1| putative competence lipoprotein [Stenotrophomonas maltophilia K279a] gi|190013524|emb|CAQ47159.1| putative competence lipoprotein precursor [Stenotrophomonas maltophilia K279a] Length = 295 Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 116/263 (44%), Gaps = 18/263 (6%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LT + V G R + + D T V ++YEK+ ++ N+S A F + Sbjct: 14 LTALLLVLVIAATGCHRGAKKGDRPDEGTPV---EQLYEKSHKLMQGGNWSGAETSFRRL 70 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P+ ++++ +A+ QY AGK+ A S + +I YP +N+ Y+YYL G++ + Sbjct: 71 VAQYPYGPYTEQAMIETAYAQYKAGKHDDAVSSIDRFIRTYPTHRNIAYLYYLRGLANSN 130 Query: 144 M----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + D + +V+RY NS Y AR + R+ A E Sbjct: 131 RSTVFLRRVWSLDASRRDLSTPHQAYSDFNIVVDRYPNSRYAADARQRMLELRDVFAQHE 190 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 ++ YY++RG +V+A R +L Y + +A+A L ++Y L A + ++ Sbjct: 191 LDNALYYMRRGAWVSAAGRANYLLETYPQSAFQYDAVAVLADSYTHLGNKTLADDARRVL 250 Query: 254 QERYPQ-----GYWARYVETLVK 271 Q P G W +Y + K Sbjct: 251 QLNQPDHPWLEGKWPKYPWMIRK 273 >gi|167562572|ref|ZP_02355488.1| competence lipoprotein ComL [Burkholderia oklahomensis EO147] gi|167569755|ref|ZP_02362629.1| competence lipoprotein ComL [Burkholderia oklahomensis C6786] Length = 274 Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 54/236 (22%), Positives = 94/236 (39%), Gaps = 14/236 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + T ++Y +A L ++ K +YF PF A+++ Sbjct: 27 GCHGLPQKTDE----TAAWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQA 82 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------R 146 + A+ + + A + +I +P+ ++ Y YYL GM + Sbjct: 83 QINVAYCNWKDNEAAAADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQD 142 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A + +V+RY S Y A + N LA+ EV YY +RG Y Sbjct: 143 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHSADYYYRRGAY 202 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 VAAI R QL + Y +A E+A+ ++ +Y L A + ++ +P + Sbjct: 203 VAAINRAQLAIKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F +P + A + + SA Y G Y A + + I +Y Sbjct: 158 FKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHSADYYYRRGAYVAAINRAQLAIKEYK 217 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SYA++ + +L + + +SPYV Sbjct: 218 NAPAIEDALHIMMLSYAKLNQ--------PQLADDTKRVLASTFPDSPYVT 260 >gi|89075040|ref|ZP_01161481.1| hypothetical protein SKA34_21630 [Photobacterium sp. SKA34] gi|89049127|gb|EAR54692.1| hypothetical protein SKA34_21630 [Photobacterium sp. SKA34] Length = 242 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 17/243 (6%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LTI +AV L G S DV D +Y A L++ N++ A E Sbjct: 4 LTITTLLAVALLSGCS--SKEDVIPDVPPSN-----LYATAQTALQKGNWTSAIEQLEAL 56 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF + + L + Y + + E ++ P+ D+V Y+ G+++ Sbjct: 57 DSRYPFGAYSDQVQLDLIYAYYKSDDLALGEATIERFLRLNPDHPQADWVVYMRGLTHMA 116 Query: 144 MIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 R D ++ + ++ERY S Y A+ + +N+LA + Sbjct: 117 QDRSFMHDMFNINRFDRDPTPSRQAFKDFKYLLERYPESEYSADAKTRMIFLKNRLANYD 176 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +Y++R ++AAI R Q + YSD E A +++A AY L L E L+ Sbjct: 177 LATVDFYIRREAWIAAINRCQQIQRLYSDTEAARQSLALEKTAYEKLNLQKEVERTDKLM 236 Query: 254 QER 256 + Sbjct: 237 KLN 239 >gi|226953431|ref|ZP_03823895.1| DNA uptake lipoprotein-like protein [Acinetobacter sp. ATCC 27244] gi|294649579|ref|ZP_06726998.1| competence protein [Acinetobacter haemolyticus ATCC 19194] gi|226835814|gb|EEH68197.1| DNA uptake lipoprotein-like protein [Acinetobacter sp. ATCC 27244] gi|292824518|gb|EFF83302.1| competence protein [Acinetobacter haemolyticus ATCC 19194] Length = 329 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 109/253 (43%), Gaps = 14/253 (5%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y++ AL++ + A VG S+ +D ++ +EKA+ L+ ++ A Sbjct: 6 YKITVLALSLGVASAF---VGCSSNPSKKEVVDKGPQ-SSEQVYFEKALKSLERNQYTDA 61 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + FP +++ L + ++ Y+ +L + +I P+ NVDY YY+ Sbjct: 62 VKSLEALDTYFPTGQYTQQAQLELLYAKFKQKDYEGTIALADRFIRLNPQHPNVDYAYYV 121 Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 G++ +M ++ D K+ Q ++ R+ +S Y A + Sbjct: 122 RGVANMEMNYDSLIRYTSLKQAHRDVSYIKVAYQNFVDLIRRFPSSQYSVDAAQRMKYIG 181 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +LA E+ R+ ++R ++AA R + VL Y EA+A L +Y L + Sbjct: 182 QELAESEMNAARFNIQRKAWLAAAERARWVLEYYPQTPQTPEALATLAYSYQQLGDKATS 241 Query: 247 REVVSLIQERYPQ 259 ++ + +++ YP Sbjct: 242 QQYIEILKLNYPN 254 >gi|194366932|ref|YP_002029542.1| outer membrane assembly lipoprotein YfiO [Stenotrophomonas maltophilia R551-3] gi|194349736|gb|ACF52859.1| outer membrane assembly lipoprotein YfiO [Stenotrophomonas maltophilia R551-3] Length = 289 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 116/263 (44%), Gaps = 18/263 (6%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LT + V G R + + D T V ++YEK+ ++ N+S A F + Sbjct: 8 LTALLLVLVIAATGCHRGAKKGDRPDEGTPV---EQLYEKSHKLMQGGNWSGAESSFRRL 64 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P+ ++++ +A+ QY AGK+ A S + +I YP +N+ Y+YYL G++ + Sbjct: 65 VAQYPYGPYTEQAMIETAYAQYKAGKHDDAVSSIDRFIRTYPTHRNIAYLYYLRGLANSN 124 Query: 144 M----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + D + +V+RY NS Y AR + R+ A E Sbjct: 125 RSTVFLRHVWSLDASRRDLSTPHQAYSDFNIVVDRYPNSRYAADARQRMLELRDVFAQHE 184 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 ++ YY++RG +V+A R +L Y + +A+A L ++Y L A + ++ Sbjct: 185 LDNALYYMRRGAWVSAAGRANYLLETYPQSAFQYDAVAVLADSYTHLGNKTLADDARRVL 244 Query: 254 QERYPQ-----GYWARYVETLVK 271 Q P G W +Y + K Sbjct: 245 QLNQPDHPWLEGKWPKYPWMIRK 267 >gi|260771110|ref|ZP_05880037.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio furnissii CIP 102972] gi|260613707|gb|EEX38899.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio furnissii CIP 102972] gi|315179285|gb|ADT86199.1| hypothetical protein vfu_A01006 [Vibrio furnissii NCTC 11218] Length = 241 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 50/226 (22%), Positives = 95/226 (42%), Gaps = 15/226 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 S++++ D ++Y +A L+ N+ A E +PF + + L Sbjct: 19 SSNKEIVPDVPP-----AQLYTEAQTSLQGGNWMTAIEKLEALDSRYPFGAYSEQVQLDL 73 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PY 150 + Y + E ++ P + +D+V Y+ G+S+ R+ Sbjct: 74 IYAYYKNDDLALGLATIERFMRLNPTHEKMDWVLYMRGLSHMAQDRNFMHDLFNVDRSDR 133 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D K R+++RY NS Y + A+ + +N+LA ++ +YL+R ++AAI Sbjct: 134 DPEPVKAAFADFKRLLQRYPNSSYAEDAQRRMFALKNRLADYDLATADFYLRREAWIAAI 193 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 R Q + Y D E A +++ ++AY L L D L++ Sbjct: 194 NRTQELQKTYPDTEAARKSLKIQLQAYKELGLKDSIARTQQLMELN 239 >gi|288940533|ref|YP_003442773.1| outer membrane assembly lipoprotein YfiO [Allochromatium vinosum DSM 180] gi|288895905|gb|ADC61741.1| outer membrane assembly lipoprotein YfiO [Allochromatium vinosum DSM 180] Length = 275 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 10/224 (4%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T+ ++Y +A L ++ A E + + +PF A ++ L A+ Y A + + Sbjct: 30 TEGWSASKLYSEAATELDAGSYEHAIELYQKLEARYPFGRYAMQAQLDVAYAHYRAEEPE 89 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATKLMLQY 161 A + + +I YP++ VDY YYL G+ D + + Sbjct: 90 DALAAADRFIKLYPQNPYVDYAYYLKGIVNYNRSIGFLDRFIPTDASQRDPGSALDAFKD 149 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + +VER+ NS Y + AR + R+ LA EV + RYY+KRG Y+AA R V+ +Y Sbjct: 150 FAILVERFPNSKYAEDARQRMVYLRSNLAMNEVHVARYYMKRGAYLAAANRANHVIQHYQ 209 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 ++A+ L++AY AL D A + ++ +G + Sbjct: 210 RTSAVDDALEVLIDAYRALGKDDLAADAKRVLDLNRQEGRFIAD 253 >gi|149377767|ref|ZP_01895500.1| DNA uptake lipoprotein [Marinobacter algicola DG893] gi|149357939|gb|EDM46428.1| DNA uptake lipoprotein [Marinobacter algicola DG893] Length = 292 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 17/252 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + A F+ D +V ++ YE A + NF++A + Sbjct: 15 MRSVVRLLLVTTAALFISACASN-------DKQEEVLPEQTYYENARDAMNSGNFNEAEQ 67 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + +PF A ++ L + +Y + A + + ++ P+S + DY Y+ G Sbjct: 68 NLDYLETYYPFGRYAEQAQLDLIYARYQNLDLEGARAAADRFLRLNPQSDHADYALYMRG 127 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + + D + Q S ++ RY +S Y AR + RN+ Sbjct: 128 LASYNLDIGLAARYFPVDVSARDPGEQRQAFQDFSELLNRYPSSEYAPDARQRMIAIRNR 187 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ RYY+ R Y+AA R + ++ NYS EEA+ L E + + L A + Sbjct: 188 LAELELYAARYYISREAYIAANNRARYIIENYSTTPSVEEALIILAETFRFMDLKKGATD 247 Query: 249 VVSLIQERYPQG 260 V++++E +P Sbjct: 248 AVAMLKENFPDS 259 >gi|315122569|ref|YP_004063058.1| outer membrane assembly lipoprotein YfiO [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495971|gb|ADR52570.1| outer membrane assembly lipoprotein YfiO [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 258 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 146/255 (57%), Positives = 189/255 (74%), Gaps = 2/255 (0%) Query: 19 LYKFALTIFFSIAVCFLVGWERQ--SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 +Y+F LTIFF + FL + Q S++ S++D +YQR +YEKAV L+ +NF KA Sbjct: 1 MYRFVLTIFFISTLSFLASCKHQNQPSQNFIFPSISDKKYQRNLYEKAVELLENKNFEKA 60 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + F S++ PF VARK+LLMSAF +Y KY +ASLGEEYI QYP S+++DYVYYL Sbjct: 61 SKEFYSFSKELPFNDVARKALLMSAFAKYKTKKYLSSASLGEEYIAQYPNSEDIDYVYYL 120 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 VGMSYAQ IR+V YDQ T+ M+QYMS I+E+Y SPY KGA+FY+++GRNQLA +E+ + Sbjct: 121 VGMSYAQKIRNVSYDQHPTQSMVQYMSEILEKYPKSPYSKGAQFYLSIGRNQLAGQEMYV 180 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 GRYYLK EYV+AI RFQLV+ANY D E EEAMARLVEAY L L+DEA + S+IQ++ Sbjct: 181 GRYYLKNKEYVSAILRFQLVIANYFDTEQVEEAMARLVEAYFMLGLVDEATSMASVIQQK 240 Query: 257 YPQGYWARYVETLVK 271 YP+G W+ YV LV+ Sbjct: 241 YPKGLWSDYVSDLVQ 255 >gi|297183635|gb|ADI19761.1| hypothetical protein [uncultured gamma proteobacterium EB000_37F04] Length = 256 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 10/210 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A LK +NFS A +PF A ++ L + YSA ++ A + Sbjct: 1 MYREAQRHLKNENFSLAVRSLQGLESRYPFGQYAEQAQLELIYAHYSAYEFAAANEAADR 60 Query: 120 YITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERY 169 +I +P +VDY YY+ G++ + D D + ++++ R+ Sbjct: 61 FIRLHPRHPSVDYAYYMKGLAAYDIEPGFFSRFIPSDDTKRDVSHIQTAFAEFAQLLARF 120 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 +S Y AR + RN LA E+ + YY +RG Y+AA+ R + V+ + + Sbjct: 121 PDSAYAPDARQRMVHMRNMLARNEIHVANYYFRRGAYMAALNRGKYVVEHMQQTPSVADG 180 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQ 259 +A + +AY+ L L D A + ++++ E YP Sbjct: 181 LAIMGQAYLLLGLNDLAEDSIAVLCENYPD 210 >gi|121999015|ref|YP_001003802.1| putative lipoprotein [Halorhodospira halophila SL1] gi|121590420|gb|ABM63000.1| putative lipoprotein [Halorhodospira halophila SL1] Length = 253 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 16/249 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +++ ++ G R E+Y A L N+S+A E Sbjct: 1 MHRIQRWATIALVALLATGCAGTD------PDGAAERSVEELYTDARSSLSSGNYSQAVE 54 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F +PF A +S LM + Y AG+++ A + E + +P +++V Y Y+ G Sbjct: 55 RFENLVARYPFGTHAVQSQLMIIYAHYLAGQHESAIAAAERFQRMHPRNEHVAYALYMRG 114 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 +S + D + + E+Y +S Y+ A + R Sbjct: 115 VSRQAQGPGGLGDLFNVDANLRDPEPKRRAFADFRELTEQYPDSEYIDDAVERMEQIRVA 174 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ +GR+YL+R Y+A+ R + ++A Y EAM L E+Y L L + Sbjct: 175 LAEHELYVGRFYLERSAYIASANRARTIIARYPGTPAVPEAMGMLAESYRRLGLDPLDED 234 Query: 249 VVSLIQERY 257 V ++ER+ Sbjct: 235 VERALRERH 243 >gi|52425875|ref|YP_089012.1| NrfG protein [Mannheimia succiniciproducens MBEL55E] gi|52307927|gb|AAU38427.1| NrfG protein [Mannheimia succiniciproducens MBEL55E] Length = 297 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 55/248 (22%), Positives = 110/248 (44%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + KF +++V + + + ++E++ +L+E N+++A Sbjct: 1 MRKFKSLTLIALSVLVIASCSSS-------EKPVEQASEQELFSTGANYLQEGNYTQATR 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 Y FP + + ++ L F Y + Y + + + ++ Q+P+S+++DYV Y+ Sbjct: 54 YLEAVDSRFPGSSYSEQAELNLIFSTYKSQDYTKTLTTADRFLQQFPQSQHLDYVLYMAA 113 Query: 139 MSY-------AQMIRDVPYDQRAT---KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ Q V R T K +V+ + NSPY A + +++ Sbjct: 114 LTNSALGDNLFQDFFGVDRSTRETTSMKTAFNNFQTLVQNFPNSPYTPDALARMAYIKDR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+EI ++Y KR +VA R +L +Y D + EA+ L E+Y + L A + Sbjct: 174 LARHELEIAKFYAKRSAWVATSNRITGMLRSYPDTQATLEALPLLQESYEKMGLTQLASQ 233 Query: 249 VVSLIQER 256 +L++ Sbjct: 234 AATLVKAN 241 Score = 38.9 bits (90), Expect = 0.80, Method: Composition-based stats. Identities = 13/128 (10%), Positives = 30/128 (23%), Gaps = 32/128 (25%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 +Y+ + R+ S Y + A + K +Y + Sbjct: 50 QATRYLEAVDSRFPGSSYSEQAELNLIFST--------------YKSQDYTKTLTTADRF 95 Query: 217 LANYSDAEHAEEAMARLVEAYVALALM------------------DEAREVVSLIQERYP 258 L + ++H + + AL A + + +P Sbjct: 96 LQQFPQSQHLDYVLYMAALTNSALGDNLFQDFFGVDRSTRETTSMKTAFNNFQTLVQNFP 155 Query: 259 QGYWARYV 266 + Sbjct: 156 NSPYTPDA 163 >gi|261250363|ref|ZP_05942939.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio orientalis CIP 102891] gi|260939479|gb|EEX95465.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio orientalis CIP 102891] Length = 241 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 56/231 (24%), Positives = 97/231 (41%), Gaps = 17/231 (7%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 VG SS +V D E+Y A + L+ N+ A E +PF + + Sbjct: 16 VGCS--SSEEVVPDVPP-----SELYSDAQISLQSGNWLTAIEKLEALDSRYPFGAYSEQ 68 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV------- 148 L + Y + E ++ P + +D+V Y+ G+++ R+ Sbjct: 69 VQLDLIYAYYKNDDLALGLATIERFMRLNPTQEKLDWVLYMRGLTHMAQDRNFMHDLFNV 128 Query: 149 ---PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 D K +++ERY NSPY + ++ + +N+LA ++ +YL+R Sbjct: 129 DRSDRDPEPVKKAFADFKKLLERYPNSPYAEDSQKRMYALKNRLAEYDLATADFYLRREA 188 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 ++AAI R Q + Y D E A +++ +EAY L L D LI+ Sbjct: 189 WIAAINRTQELQKTYPDTEAARKSLDIQLEAYKQLNLQDAVERTEKLIELN 239 >gi|187923830|ref|YP_001895472.1| outer membrane assembly lipoprotein YfiO [Burkholderia phytofirmans PsJN] gi|187715024|gb|ACD16248.1| outer membrane assembly lipoprotein YfiO [Burkholderia phytofirmans PsJN] Length = 286 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 10/221 (4%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T ++Y +A L +F K +YF PF A+++ + A+ + + Sbjct: 50 TATWNNNKLYTEANDALSGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNENA 109 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATKLMLQY 161 A + +I +P+ ++ Y YYL GM + D ++ + Sbjct: 110 AADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLRESYDA 169 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 +V++Y NS Y A + N LA+ EV YY +RG YVAAI R QL L Y Sbjct: 170 FKVVVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALTQYK 229 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 +A E+A+ ++ +Y L A + ++ +P + Sbjct: 230 NAPAIEDALHIMMLSYEKLNQPQLADDTKRVLAGTFPDSPY 270 >gi|238897771|ref|YP_002923450.1| outer membrane protein assembly complex subunit, DNA uptake lipoprotein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465528|gb|ACQ67302.1| outer membrane protein assembly complex subunit, DNA uptake lipoprotein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 242 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 59/239 (24%), Positives = 104/239 (43%), Gaps = 17/239 (7%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + SI L + ++ + D E+Y A L E NF +A Sbjct: 7 LVIPSIFALTLSACSK--NKRIVPDQP-----ASELYAVAQKALSEGNFREAITQLEALD 59 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS---- 140 FPF G +++ L + Y + + A + + +I P S N+DYV YL G++ Sbjct: 60 TRFPFGGYSQQVQLDLIYAYYKSDQLALAQASIDRFIRLNPTSPNIDYVLYLRGLTEMGL 119 Query: 141 ------YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 + D + ++++ + NS Y+ A+ + +++LA E+ Sbjct: 120 DENQLQNFFGVDRSDRDPEHALRAFRDFQQLIQYHPNSTYLADAQKRLIFLKDRLATHEL 179 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +YY+KR YVA I R + +L NY D + A+ + +AY L L ++A +V LI Sbjct: 180 AVVQYYIKREAYVAVINRVEEMLKNYPDTQATRTALPLMEQAYRKLQLHEQADKVAKLI 238 >gi|170692347|ref|ZP_02883510.1| putative competence lipoprotein, ComL [Burkholderia graminis C4D1M] gi|170142777|gb|EDT10942.1| putative competence lipoprotein, ComL [Burkholderia graminis C4D1M] Length = 286 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 10/221 (4%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T ++Y +A L +F K +YF PF A+++ + A+ + + Sbjct: 50 TATWNNNKLYTEANDALSGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNEAA 109 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATKLMLQY 161 A + +I +P+ ++ Y YYL GM + D ++ + Sbjct: 110 AADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLRESYDA 169 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 +V+RY NS Y A + N LA+ EV YY +RG YVAAI R QL L Y Sbjct: 170 FKVVVDRYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALKEYK 229 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 +A E+A+ ++ +Y L A + ++ +P + Sbjct: 230 NAPAIEDALHIMMLSYQRLNQPQLADDTKRVLAGTFPDSPY 270 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 22/111 (19%) Query: 80 FNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEYITQYP 125 F +P + A + + +A Y G Y A + + + +Y Sbjct: 170 FKVVVDRYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALKEYK 229 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + ++ +++ +SY ++ + +L + + +SPYV Sbjct: 230 NAPAIEDALHIMMLSYQRLNQ--------PQLADDTKRVLAGTFPDSPYVT 272 >gi|254525277|ref|ZP_05137332.1| competence lipoprotein [Stenotrophomonas sp. SKA14] gi|219722868|gb|EED41393.1| competence lipoprotein [Stenotrophomonas sp. SKA14] Length = 289 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 116/263 (44%), Gaps = 18/263 (6%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LT + V G R + + D T V ++YEK+ ++ N+S A F + Sbjct: 8 LTALLLVLVIAATGCHRGAKKGDRPDEGTPV---EQLYEKSHKLMQGGNWSGAETSFRRL 64 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P+ ++++ +A+ QY AGK+ A S + +I YP +N+ Y+YYL G++ + Sbjct: 65 VAQYPYGPYTEQAMIETAYAQYKAGKHDDAVSSIDRFIRTYPTHRNIAYLYYLRGLANSN 124 Query: 144 M----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + D + +V+RY NS Y AR + R+ A E Sbjct: 125 RSTVFLRRVWSLDASRRDLSTPHQAYSDFNIVVDRYPNSRYAADARSRMLELRDVFAQHE 184 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 ++ YY++RG +V+A R +L Y + +A+A L ++Y L A + ++ Sbjct: 185 LDNALYYMRRGAWVSAAGRANYLLETYPQSAFQYDAVAVLADSYTHLGNKTLADDARRVL 244 Query: 254 QERYPQ-----GYWARYVETLVK 271 Q P G W +Y + K Sbjct: 245 QLNQPDHPWLEGKWPKYPWMIRK 267 >gi|121602062|ref|YP_989220.1| putative lipoprotein [Bartonella bacilliformis KC583] gi|120614239|gb|ABM44840.1| putative lipoprotein [Bartonella bacilliformis KC583] Length = 279 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 83/253 (32%), Positives = 126/253 (49%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K + + W + + V + VY +A+ +A + Sbjct: 1 MRKILIGVCGGGIFLLAGCWFKDKNALDPAVHVLKIDSPDVVYAQALSHFHSGKLDEALK 60 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F+ + RKSL+MSA Y KY A S + YIT YP + + Y YYLVG Sbjct: 61 KFSIIEEQHAYTEWGRKSLIMSASTNYRLAKYDDAISAAQRYITLYPTAGDAAYAYYLVG 120 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +S Q I V DQ+ TK + M ++ERY S YV A+ + GR QLA +E++IGR Sbjct: 121 LSSFQQISHVTRDQQDTKRAIAAMQLLIERYPESDYVNDAKAKILFGREQLAGQEMQIGR 180 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YY + +Y+AA RF+ V+ YSD + EEA+ RL E AL L++EA+ +++ YP Sbjct: 181 YYERGQQYLAASRRFRTVIEEYSDTKQIEEALFRLTEVSFALGLIEEAQTAAVMLERYYP 240 Query: 259 QGYWARYVETLVK 271 + W ++ L+K Sbjct: 241 ESSWYKFASDLLK 253 >gi|254292784|ref|YP_003058807.1| outer membrane assembly lipoprotein YfiO [Hirschia baltica ATCC 49814] gi|254041315|gb|ACT58110.1| outer membrane assembly lipoprotein YfiO [Hirschia baltica ATCC 49814] Length = 260 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 81/248 (32%), Positives = 135/248 (54%), Gaps = 3/248 (1%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + S + + SS D D + ++Y +A + + + +A F + Sbjct: 9 LLVTISASALIMTSC---SSSDRKKDLAYIEKPVEQLYNEAGRSVDRKQWDRAALEFQEV 65 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 R P++ A +++LM+A+VQY + +Y + + +Y YP SK+ Y YYL+ +S+ Sbjct: 66 QRQHPYSEWAERAMLMTAYVQYKSRQYAEVEASAGQYTALYPSSKSAAYAYYLIALSHFD 125 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 I DV DQ T+L L + +V RY + Y + A + + R+QLA KE+E+GRYYLK Sbjct: 126 QITDVGRDQGRTELALSALQDVVRRYPTTEYARDAELKIDMVRDQLAGKEMEVGRYYLKS 185 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 E++AAI RF+ V+ Y HA EA+ RLVEAY+++ L+ +A+ +++ YP W Sbjct: 186 SEFLAAINRFKRVVDEYETTTHAPEALHRLVEAYLSIGLVGQAQAAAAVLGHNYPSSRWY 245 Query: 264 RYVETLVK 271 R L++ Sbjct: 246 RDSYKLME 253 >gi|319786172|ref|YP_004145647.1| outer membrane assembly lipoprotein YfiO [Pseudoxanthomonas suwonensis 11-1] gi|317464684|gb|ADV26416.1| outer membrane assembly lipoprotein YfiO [Pseudoxanthomonas suwonensis 11-1] Length = 297 Score = 244 bits (624), Expect = 8e-63, Method: Composition-based stats. Identities = 63/248 (25%), Positives = 118/248 (47%), Gaps = 15/248 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 RD + R E+YEK +++ N++ A F + +P+ ++L+ Sbjct: 30 ATGCGRDKKKKDADEGRPVAELYEKGHGYMERGNWTGAETVFRRLVAQYPYGPYTEQALM 89 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDV 148 +A+ QY AG++ +A S + +I YP +N+ Y YYL G+S + Sbjct: 90 ETAYAQYKAGRHDEAVSTIDRFIRTYPTHRNIAYFYYLRGLSNSNRDAVFMQRVWSLDPS 149 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D + + + + + +RY NS Y AR + V RN A E++I YY++RG +++ Sbjct: 150 RRDLSSPQQAYEDFNTVAQRYPNSRYAPDARQRMVVLRNVFARHEMDIALYYMRRGAWLS 209 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ-----GYWA 263 A+ R + +L Y +++ +A+A L E+Y L + + + +++ PQ G W Sbjct: 210 AVSRAKYILETYPQSDYQYDAIAALAESYDNLGQKQLSEDAIRVLRLNDPQHPYLSGDWP 269 Query: 264 RYVETLVK 271 +Y + K Sbjct: 270 KYPWAIRK 277 >gi|119476935|ref|ZP_01617216.1| competence protein ComL [marine gamma proteobacterium HTCC2143] gi|119449742|gb|EAW30979.1| competence protein ComL [marine gamma proteobacterium HTCC2143] Length = 294 Score = 244 bits (624), Expect = 8e-63, Method: Composition-based stats. Identities = 61/250 (24%), Positives = 114/250 (45%), Gaps = 18/250 (7%) Query: 19 LYKFALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + + A +IF S+ + L G D V ++E+YE A L+++++ A Sbjct: 1 MNRLAKSIFLSVFLLAGLAGCSSD-------DEVPQDMTEKELYESAQDSLRQESYQNAV 53 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + FPF A ++ L + Y + + + + + +I +P+ N DY YY+ Sbjct: 54 KKLQLLEARFPFGPYAEQAQLEIIYAHYLNFESEASIAAADRFIRLHPQHPNADYAYYIK 113 Query: 138 GMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G++ D A + +++ RY +SPY A+ + R Sbjct: 114 GLANYVEGEGFLDRFLPTDMTMRDPGAALQSFEDFRQLLYRYPDSPYASDAKARMLYLRA 173 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 +LA E+ + YY +RG Y+AA R + V+ N+ +A+A +V+AY L+L D A Sbjct: 174 RLARYEINVANYYFERGAYIAAANRGRYVVENFPQTPATADALAVMVQAYQLLSLDDLAA 233 Query: 248 EVVSLIQERY 257 + ++++ E Y Sbjct: 234 DALAMLNENY 243 >gi|296157779|ref|ZP_06840613.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. Ch1-1] gi|295892025|gb|EFG71809.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. Ch1-1] Length = 286 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 10/221 (4%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T ++Y +A L +F K +YF PF A+++ + A+ + + Sbjct: 50 TATWNNNKLYTEANDALTGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNENA 109 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATKLMLQY 161 A + +I +P+ ++ Y YYL GM + D ++ + Sbjct: 110 AADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLRESYDA 169 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 +V++Y NS Y A + N LA+ EV YY +RG YVAAI R QL L Y Sbjct: 170 FKIVVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALTQYK 229 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 +A E+A+ ++ +Y L A + ++ +P + Sbjct: 230 NAPAIEDALHIMMLSYQRLNQPQLADDTKRVLAGTFPDSPY 270 >gi|332530534|ref|ZP_08406473.1| putative transmembrane protein [Hylemonella gracilis ATCC 19624] gi|332040009|gb|EGI76396.1| putative transmembrane protein [Hylemonella gracilis ATCC 19624] Length = 276 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 10/227 (4%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 D T E+ E+A ++ +++A F + +A+++ L A+ QY Sbjct: 29 PDDPTAKMKPEEILEQAREEVRNFQYTQAVTLFEKLEGRAAGTPLAQQAQLEKAYAQYKD 88 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKL 157 + QA + + ++ +P S +DY YL G+ + DQ A K Sbjct: 89 DQSAQAVATLDRFMRLHPASPAIDYALYLKGLVNFNDDLGLFSFITRQDLSERDQLAAKE 148 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + +V R+ +S Y AR + N LA EV + RYY KRG YVAAI R Q + Sbjct: 149 SWSAFNELVTRFPDSRYSADARARMVYIVNTLARYEVHVARYYFKRGAYVAAINRAQQAV 208 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 A+Y A E+A+ LV++Y AL + + ++ +P + + Sbjct: 209 ADYRTAPALEDALQILVDSYEALNMPQLRDDARRVLATNFPNSAYLK 255 >gi|91788478|ref|YP_549430.1| hypothetical protein Bpro_2616 [Polaromonas sp. JS666] gi|91697703|gb|ABE44532.1| putative transmembrane protein [Polaromonas sp. JS666] Length = 274 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 65/245 (26%), Positives = 105/245 (42%), Gaps = 11/245 (4%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 AVC L S D T ++Y +A + KA + + Sbjct: 15 LVAAVCALSFVVAGCSTTPEPDK-TATWSPNKIYAEAKDEASSGAYDKAIPLYEKLEGRA 73 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ---- 143 +A+++ + A+ QY G+ QA + + ++ +P S +DY YL G+ Sbjct: 74 AGTPLAQQAQIEKAYAQYKGGEQPQAIATLDRFMKLHPASPAMDYALYLKGLVNFNDNLG 133 Query: 144 ------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 DQ+A K + +V R+ +S Y AR + N LA EV + Sbjct: 134 LFSFISRQDLSERDQKAAKESFESFRDLVNRFPDSRYTPDARLRMAYIVNSLAQSEVHVA 193 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 RYY RG YVAAI R Q +A Y D EEA L ++Y AL +++ ++ ++++ Y Sbjct: 194 RYYYSRGAYVAAINRAQAAIAEYRDVPALEEATYILYKSYDALGMVELRDDMRRIMEKSY 253 Query: 258 PQGYW 262 PQ + Sbjct: 254 PQSQY 258 >gi|225023855|ref|ZP_03713047.1| hypothetical protein EIKCOROL_00721 [Eikenella corrodens ATCC 23834] gi|224943329|gb|EEG24538.1| hypothetical protein EIKCOROL_00721 [Eikenella corrodens ATCC 23834] Length = 269 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 61/255 (23%), Positives = 116/255 (45%), Gaps = 14/255 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLD-SVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + K L ++ L S+ V D +T ++Y +A ++ +N+S++ Sbjct: 1 MKKILLVTGLAV---MLSACSSTSTTAVSQDAQITQDWSVDKLYAEAHDEMESRNYSRSV 57 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + FP A +S L +A+V Y + QA + E+++ YP N DY YL Sbjct: 58 RLYEILRARFPNTRQAVQSRLDTAYVYYKDEQQPQALAHVEQFLKLYPNHPNTDYALYLK 117 Query: 138 GMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+ + + D +A + Q + ++ R+ +S Y AR + + Sbjct: 118 GLIVLNQDKSIFNKLASQDWSDRDPKANREAYQVFNELITRFPDSKYANDAREKMARLVD 177 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 L E+ I RYY++RG Y+AA R Q +++ Y + + EEA+A ++ AY L + + Sbjct: 178 ALGGNEMAIARYYMQRGAYLAAANRAQGIVSRYQNTRYVEEALAIMMTAYARLEKPELSS 237 Query: 248 EVVSLIQERYPQGYW 262 + ++ + +PQ + Sbjct: 238 DTRRVLAQNFPQSPY 252 >gi|91783469|ref|YP_558675.1| putative competence lipoprotein, ComL [Burkholderia xenovorans LB400] gi|91687423|gb|ABE30623.1| Putative competence lipoprotein, ComL [Burkholderia xenovorans LB400] Length = 286 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 10/221 (4%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T ++Y +A L +F K +YF PF A+++ + A+ + + Sbjct: 50 TATWNNNKLYTEANDALTGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWKDNENA 109 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRATKLMLQY 161 A + +I +P+ ++ Y YYL GM + D ++ + Sbjct: 110 AADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLRESYDA 169 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 +V++Y NS Y A + N LA+ EV YY +RG YVAAI R QL L Y Sbjct: 170 FKIVVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLALTQYK 229 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 +A E+A+ ++ +Y L A + ++ +P + Sbjct: 230 NAPAIEDALHIMMLSYQRLNQPQLADDTKRVLAGTFPDSPY 270 >gi|262376644|ref|ZP_06069872.1| competence lipoprotein comL [Acinetobacter lwoffii SH145] gi|262308354|gb|EEY89489.1| competence lipoprotein comL [Acinetobacter lwoffii SH145] Length = 321 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 108/254 (42%), Gaps = 17/254 (6%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSK 75 Y++ A+T+ + A+ VG ++V +VY +KA L ++ Sbjct: 6 YKMTMLAVTLGIASAM---VGCSSNPKKEVVDKGPE---SSEQVYIQKAQKALDRNQYTD 59 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + FP + A ++ L +V++ Y+ A +L E +I P+ NVDY YY Sbjct: 60 AAKQLEALETYFPTSQYAPQAQLELLYVKFQQKDYEGAVALAERFIRLNPQHPNVDYAYY 119 Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G+S + ++ D K+ Q + RY +S Y A + Sbjct: 120 VRGVSNMEQNYNGLLRYTSLKQSHRDVSYLKVAYQNFVDFIRRYPSSTYAVDAAQRMQFI 179 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 +LA E+ R+ +KR Y+AA+ R V+ +Y EA+A + Y L Sbjct: 180 GQELAEHEMNAARFNIKRKAYLAAVERGLWVIEHYPQTPQIPEALATVAYGYAQLGDKAT 239 Query: 246 AREVVSLIQERYPQ 259 +++ V +++ YP Sbjct: 240 SQQYVDVLKLNYPN 253 >gi|110833336|ref|YP_692195.1| competence lipoprotein ComL [Alcanivorax borkumensis SK2] gi|110646447|emb|CAL15923.1| competence lipoprotein ComL, putative [Alcanivorax borkumensis SK2] Length = 272 Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats. Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 10/227 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + + Y +A ++ +N+ A + + FP+ A +S L + QY + Sbjct: 21 PEDRPELTEADQYREARESIESKNYLTAIDQLKELEARFPYGDYAEQSALDLIYAQYKSV 80 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158 Y + ++ +P +DY Y+ G++ M D A K Sbjct: 81 DYPATVVAAQRFMRNHPAHPRMDYALYMRGLANFNMEKGLFDNMVASDRSSKDMAAAKDA 140 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + R+V R+ +S Y AR + RNQLA +E+ + RYY +RG VA++ R Q V+ Sbjct: 141 FRDFERLVSRFPDSEYAPDARARMVHIRNQLARQELHVARYYARRGAIVASLNRAQYVVK 200 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 +Y EE++A +V+ Y L L +A + +++ +P + Sbjct: 201 HYQHTPAVEESLAIMVKGYQRLELPKQAEKSRAVLALNWPNSTFLDD 247 >gi|239815170|ref|YP_002944080.1| outer membrane assembly lipoprotein YfiO [Variovorax paradoxus S110] gi|239801747|gb|ACS18814.1| outer membrane assembly lipoprotein YfiO [Variovorax paradoxus S110] Length = 268 Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats. Identities = 59/236 (25%), Positives = 98/236 (41%), Gaps = 16/236 (6%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G S T +Y +A + + KA + + +A+++ Sbjct: 23 GCSSTSVDK------TANWSPNRIYAEAKDEVGSGAYDKAVPLYEKLEGRAAGTPLAQQA 76 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-------- 148 L A+ QY +G+ A + + ++ +P S +DY YL G+ + Sbjct: 77 QLEKAYAQYKSGEKANAIATIDRFLKLHPASPAIDYALYLKGVINFNDDLGMFAFLTRQD 136 Query: 149 --PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 DQ+A K + + R+ S Y AR + N LA EV + RYY RG Y Sbjct: 137 LSERDQKAAKESFESFKELATRFPESRYAPDARQRMNYIVNSLAQYEVHVARYYYSRGAY 196 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 +AAI R QL L++Y + EEA+ +V +Y AL + D + ++ YP + Sbjct: 197 LAAINRAQLALSDYREVPALEEALYIIVRSYDALGMKDLRDDAQRVLTTNYPHSEY 252 >gi|220933993|ref|YP_002512892.1| putative competence lipoprotein precursor [Thioalkalivibrio sp. HL-EbGR7] gi|219995303|gb|ACL71905.1| putative competence lipoprotein precursor [Thioalkalivibrio sp. HL-EbGR7] Length = 254 Score = 241 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 10/220 (4%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T ++Y +A L NF +A Y+ FPF+ A+++ L A+ + A + Sbjct: 27 DPTRDWSASQLYTEARAALDRGNFDQAVSYYESLEARFPFSRFAQQAQLEVAYAYHKADE 86 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-----MIRDVPYDQR-----ATKLML 159 + A + + +I P VDY YYL G+ A + R P D + Sbjct: 87 PEMALAAADRFIQINPRHPYVDYAYYLKGLVNANRGQGYLQRWFPRDPSSRNPAHLRQAF 146 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 S +V + +S Y + A + RN LAA E+ + +Y++RG ++AA R + V+ Sbjct: 147 DDFSTLVGNFPDSRYAEDAHQRLIYLRNMLAAHELHVANFYMRRGAWLAAAQRARTVIER 206 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y +A+ +A+ +V AY L L D A + + ++ P+ Sbjct: 207 YPEADSNLDALEVMVRAYRELELNDLANDALRVLTLNDPE 246 >gi|71276442|ref|ZP_00652718.1| putative lipoprotein [Xylella fastidiosa Dixon] gi|71901553|ref|ZP_00683636.1| putative lipoprotein [Xylella fastidiosa Ann-1] gi|170730992|ref|YP_001776425.1| putative lipoprotein [Xylella fastidiosa M12] gi|71162758|gb|EAO12484.1| putative lipoprotein [Xylella fastidiosa Dixon] gi|71728677|gb|EAO30825.1| putative lipoprotein [Xylella fastidiosa Ann-1] gi|167965785|gb|ACA12795.1| putative lipoprotein [Xylella fastidiosa M12] Length = 293 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 111/264 (42%), Gaps = 21/264 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + G R++ ++ D +Y+KA +K+ N++ A F + Sbjct: 13 LLAMLLATFILITGCHRETKKNAD-----DGMPVEHLYDKAHTLMKKGNWAGAEVSFKRL 67 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P+ ++++ +A+ QY +GK+ A S + +I YP N+ Y+YYL G+S + Sbjct: 68 IAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN 127 Query: 144 MI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 D A + +++RY NS Y A+ +T RN A E Sbjct: 128 RDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYAADAKKQMTELRNMFAQYE 187 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + YYL+R +VAA R +L Y + +A+A L EAY L A ++ Sbjct: 188 MNVTLYYLRRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLADNARQVL 247 Query: 254 QERYPQ------GYWARYVETLVK 271 Q P W +Y + K Sbjct: 248 QTNAPDHPWLKGKKWPKYPAAIRK 271 >gi|28199627|ref|NP_779941.1| hypothetical protein PD1756 [Xylella fastidiosa Temecula1] gi|28057742|gb|AAO29590.1| conserved hypothetical protein [Xylella fastidiosa Temecula1] Length = 298 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 111/264 (42%), Gaps = 21/264 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + G R++ ++ D +Y+KA +K+ N++ A F + Sbjct: 18 LLAVLLATFILITGCHRETKKNAD-----DGMPVEHLYDKAHTLMKKGNWAGAELSFKRL 72 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P+ ++++ +A+ QY +GK+ A S + +I YP N+ Y+YYL G+S + Sbjct: 73 IAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN 132 Query: 144 MI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 D A + +++RY NS Y A+ +T RN A E Sbjct: 133 RDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYATDAKKQMTELRNMFAQYE 192 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + YYL+R +VAA R +L Y + +A+A L EAY L A ++ Sbjct: 193 MNVTLYYLRRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLADNARQVL 252 Query: 254 QERYPQ------GYWARYVETLVK 271 Q P W +Y + K Sbjct: 253 QTNAPDHPWLKGKKWPKYPAAIRK 276 >gi|262163885|ref|ZP_06031624.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio mimicus VM223] gi|262027413|gb|EEY46079.1| probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) [Vibrio mimicus VM223] Length = 214 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 88/211 (41%), Gaps = 10/211 (4%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 E+Y +A L+ + A E +PF + + L + Y + Sbjct: 2 PPSELYSEAQSALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLA 61 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRI 165 E + P + +D+V Y+ G+++ R+ D K ++ Sbjct: 62 TIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNVDRSDRDPEPVKSAFADFKKL 121 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 ++RY NSPY + A+ + +N+LA ++ +YL+R ++AAI R Q + + D E Sbjct: 122 LQRYPNSPYAEDAQRRMYALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTFPDTEA 181 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQER 256 A +A+ +EAY L + + L++ Sbjct: 182 ARKALDIQLEAYQQLGMTEAVERTEQLMKLN 212 >gi|149907609|ref|ZP_01896356.1| hypothetical protein PE36_06967 [Moritella sp. PE36] gi|149809279|gb|EDM69208.1| hypothetical protein PE36_06967 [Moritella sp. PE36] Length = 245 Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 58/247 (23%), Positives = 98/247 (39%), Gaps = 16/247 (6%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 L I S+A+ G ++ +V + E+Y A L+ NF A E Sbjct: 3 KSIKLAISLSLALVMATGCSSKTEPNV------PDKPAIELYSIAQQSLQAGNFVSAIET 56 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 +PF + L + Y QA + + +I P K++DYVYY+ G+ Sbjct: 57 LEALDTRYPFGPHTVQVQLDLIYAYYKNSDTAQALANIDRFIRLNPSHKDIDYVYYMRGL 116 Query: 140 SYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + I D +R+++RY S YV A+ +++L Sbjct: 117 TNMGADYNLFHDLFNIDRSDRDPSYANAAFNDFTRLIKRYPQSEYVADAQKRAIAIKSRL 176 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A E+ YY+KR Y+AAI R Q ++ N++D E A+ +++AY L Sbjct: 177 ARYELSAAEYYMKRKAYIAAIQRAQHIIDNFADTESRTGALKVMIKAYDILEQPTLKANA 236 Query: 250 VSLIQER 256 ++ Sbjct: 237 KKILAAN 243 >gi|182682371|ref|YP_001830531.1| competence lipoprotein [Xylella fastidiosa M23] gi|32130367|sp|Q87AR6|Y1756_XYLFT RecName: Full=UPF0169 lipoprotein PD_1756; Flags: Precursor gi|182632481|gb|ACB93257.1| competence lipoprotein [Xylella fastidiosa M23] Length = 293 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 111/264 (42%), Gaps = 21/264 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + G R++ ++ D +Y+KA +K+ N++ A F + Sbjct: 13 LLAVLLATFILITGCHRETKKNAD-----DGMPVEHLYDKAHTLMKKGNWAGAELSFKRL 67 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P+ ++++ +A+ QY +GK+ A S + +I YP N+ Y+YYL G+S + Sbjct: 68 IAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN 127 Query: 144 MI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 D A + +++RY NS Y A+ +T RN A E Sbjct: 128 RDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYATDAKKQMTELRNMFAQYE 187 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + YYL+R +VAA R +L Y + +A+A L EAY L A ++ Sbjct: 188 MNVTLYYLRRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLADNARQVL 247 Query: 254 QERYPQ------GYWARYVETLVK 271 Q P W +Y + K Sbjct: 248 QTNAPDHPWLKGKKWPKYPAAIRK 271 >gi|71898900|ref|ZP_00681067.1| putative lipoprotein [Xylella fastidiosa Ann-1] gi|71731312|gb|EAO33376.1| putative lipoprotein [Xylella fastidiosa Ann-1] Length = 292 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 112/263 (42%), Gaps = 20/263 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + G R++ ++ D +Y+KA +K+ N++ A F + Sbjct: 13 LLAVLLATFILITGCHRETKKNAD-----DGMPVEHLYDKAHTLMKKGNWAGAEVSFKRL 67 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P+ ++++ +A+ QY +GK+ A S + +I YP N+ Y+YYL G+S + Sbjct: 68 IAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN 127 Query: 144 MI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 D A + +++RY NS Y A+ +T RN A E Sbjct: 128 RDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYAADAKKQMTELRNMFAQYE 187 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + YYL+R +VAA R +L Y + +A+A L EAY L A ++ Sbjct: 188 MNVILYYLRRTAWVAAAGRANFLLETYPQSAFQYDAVAALGEAYTHLGNKTLADNARQVL 247 Query: 254 QERYPQ-----GYWARYVETLVK 271 Q P G W +Y + K Sbjct: 248 QTNAPDHPWLKGKWPKYPAAIRK 270 >gi|254508946|ref|ZP_05121053.1| DNA uptake lipoprotein [Vibrio parahaemolyticus 16] gi|219548121|gb|EED25139.1| DNA uptake lipoprotein [Vibrio parahaemolyticus 16] Length = 214 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 10/211 (4%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 E+Y +A + L+ N+ A +PF + + L + Y + Sbjct: 2 PPSELYSEAQVSLQSGNWLSAISQLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLA 61 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRI 165 E + P + +D+V Y+ G+++ R+ D K R+ Sbjct: 62 TIERFTRLNPTHEKLDWVLYMRGLTHMAQDRNFMHDLFNVDRSDRDPEPVKKAFADFKRL 121 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 +ERY S Y + ++ + +N+LA ++ +YL+R ++AAI R Q + Y D Sbjct: 122 LERYPTSLYAEDSQKRMLALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTVA 181 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQER 256 A +++ +EAY L L D + LI+ Sbjct: 182 ARKSLKIQLEAYKQLGLEDAIKRTEELIKLN 212 >gi|1246513|emb|CAA94434.1| unkown [Escherichia coli K-12] Length = 203 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 84/199 (42%), Gaps = 10/199 (5%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 +++ N+ +A +PF +++ L + Y A + + +I P Sbjct: 1 MQDGNWRQAITQLEALYNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH 60 Query: 128 KNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKG 177 N+DYV Y+ G++ + D + + S++V Y NS Y Sbjct: 61 PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTD 120 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A + +++LA E + YY +RG +VA + R + +L +Y D + +A+ + AY Sbjct: 121 ATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAY 180 Query: 238 VALALMDEAREVVSLIQER 256 + + +A +V +I Sbjct: 181 RQMQMNAQAEKVAKIIAAN 199 >gi|307578654|gb|ADN62623.1| competence lipoprotein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 293 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 111/264 (42%), Gaps = 21/264 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + G R++ ++ D +Y+KA +K+ N++ A F + Sbjct: 13 LLAVLLATFILITGCHRETKKNAD-----DGMPVEHLYDKAHXLMKKGNWAGAELSFKRL 67 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P+ ++++ +A+ QY +GK+ A S + +I YP N+ Y+YYL G+S + Sbjct: 68 IAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN 127 Query: 144 MI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 D A + +++RY NS Y A+ +T RN A E Sbjct: 128 RDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYATDAKKQMTELRNMFAQYE 187 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + YYL+R +VAA R +L Y + +A+A L EAY L A ++ Sbjct: 188 MNVTLYYLRRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLADNARQVL 247 Query: 254 QERYPQ------GYWARYVETLVK 271 Q P W +Y + K Sbjct: 248 QTNAPDHPWLKGKKWPKYPAAIRK 271 >gi|254488543|ref|ZP_05101748.1| competence lipoprotein ComL [Roseobacter sp. GAI101] gi|214045412|gb|EEB86050.1| competence lipoprotein ComL [Roseobacter sp. GAI101] Length = 289 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 71/249 (28%), Positives = 129/249 (51%), Gaps = 1/249 (0%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 A+ + ++ C R + V + +++E+ L + ++A EYF+ Sbjct: 13 AVLVVAALGACGSQDTGRFTKSFFNPQEVPLETYSAEQIFERGEFELNRKRPAEAAEYFS 72 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + R +P++ A+++L+M AF + Y + S + +I +P+ + Y YL+ +SY Sbjct: 73 EIERLYPYSEWAKRALIMQAFAFHQDQDYPNSRSAAQRFIDFFPDDDDAAYASYLLALSY 132 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 I +V DQ T LQ + +++E Y +S Y + A + + LA KE+E+GRYYL Sbjct: 133 YDQIDEVGRDQGLTFQALQSLRQVIENYPDSEYARAAVLKFDLAFDHLAGKEMEVGRYYL 192 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +R Y A+I RF++V+ ++ H EA+ RLVEAY++L L +EA+ +++ Y Sbjct: 193 RRKHYTASINRFRVVVEDFQTTSHTAEALHRLVEAYLSLGLTNEAQTAGAILGYNYQSTE 252 Query: 262 WARYVETLV 270 W L+ Sbjct: 253 WYAASYALL 261 >gi|304309990|ref|YP_003809588.1| competence lipoprotein ComL [gamma proteobacterium HdN1] gi|301795723|emb|CBL43922.1| competence lipoprotein ComL [gamma proteobacterium HdN1] Length = 272 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 V + +R+ YE A LK++ FS+A E + +PF A ++ L + Y + Sbjct: 21 KVENELSERQYYEDAQKALKDEQFSRAVERLEALNARYPFGRYAEQAQLDLVYAYYRSMD 80 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLML 159 Y + E +I +P+ +DY YY+ G+S + R + D K Sbjct: 81 YASSGVTAERFIRMHPDHTELDYAYYMKGLSTYSVDRGIFERFIPSDYSERDLEPAKESF 140 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 SR++ R+ NS Y AR + RN A E++ + ++RG YVA+ R + V+ N Sbjct: 141 NDFSRLLNRFPNSIYAPDARKRMVYLRNLFAEHELKAAHWNMRRGAYVASANRARYVVEN 200 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 + E +A L ++Y L L D A + + ++ YP Sbjct: 201 FDRTPAMAEGLAILYKSYRELGLNDLANDTLKVLVSNYP 239 >gi|294788952|ref|ZP_06754192.1| competence lipoprotein ComL [Simonsiella muelleri ATCC 29453] gi|294483054|gb|EFG30741.1| competence lipoprotein ComL [Simonsiella muelleri ATCC 29453] Length = 268 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 60/259 (23%), Positives = 107/259 (41%), Gaps = 13/259 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + KF +F + V L G S+ +T ++Y +A L N+++A + Sbjct: 1 MKKF---LFSVVVVAALSGCAANQSKISKDAQITQNWTADQLYSEARNELNSGNYTRATK 57 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + P +SLL +A+ QY + ++A + YP S+++DY YL G Sbjct: 58 LYELLRARQPEGRYIEQSLLDTAYAQYKNEEPEKALIALARFKQNYPASRDMDYALYLKG 117 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + D + + +V++Y S Y A + + Sbjct: 118 LVLFAEEQSFLRKLASQDWADRDPASNRKAYYAFEELVKKYPTSKYAADATKRMAKLVDA 177 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ I RYY KRG YVAA R Q V+ N+ + EE++A ++ Y + A + Sbjct: 178 LGGHEIAIARYYAKRGAYVAANNRAQRVIENFQNTRFVEESLAIMIFTYKKMDKPRLAED 237 Query: 249 VVSLIQERYPQGYWARYVE 267 V ++Q +P + + Sbjct: 238 VRQVLQHNFPNSPYLQKGW 256 >gi|21243944|ref|NP_643526.1| competence lipoprotein [Xanthomonas axonopodis pv. citri str. 306] gi|78048899|ref|YP_365074.1| putative competence lipoprotein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|294625814|ref|ZP_06704431.1| competence lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666974|ref|ZP_06732203.1| competence lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325929043|ref|ZP_08190198.1| outer membrane assembly lipoprotein YfiO [Xanthomonas perforans 91-118] gi|21109554|gb|AAM38062.1| competence lipoprotein [Xanthomonas axonopodis pv. citri str. 306] gi|78037329|emb|CAJ25074.1| putative competence lipoprotein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|292599889|gb|EFF44009.1| competence lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603263|gb|EFF46685.1| competence lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325540576|gb|EGD12163.1| outer membrane assembly lipoprotein YfiO [Xanthomonas perforans 91-118] Length = 293 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 18/264 (6%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A I + + F+V + ++D D ++Y K +++ N++ A + + Sbjct: 11 ARLIALMLVMAFVVTGCHRGAKDKNPDEG---MPVEQLYGKGHNLMEKGNWAGAEASYKR 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +P+ ++++ +A+ QY AGK+ A S + +I YP +N+ Y+YYL G++ + Sbjct: 68 LIAQYPYGPYTEQAMIETAYAQYKAGKHDDAVSSVDRFIRTYPTHRNISYLYYLRGLANS 127 Query: 143 QMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 D + + + + +RY NS Y AR + R+ A Sbjct: 128 NRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDIFAQH 187 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E++ YYL+R +V+A R +L Y + +A+A L EAY L A + + Sbjct: 188 ELDNALYYLRRDAWVSAAGRANYLLETYPQSAFQYDAVAVLAEAYTHLGNKTLAADARRV 247 Query: 253 IQERYPQ-----GYWARYVETLVK 271 ++ PQ G W +Y + K Sbjct: 248 LELNDPQHPWLTGNWPKYPWAIRK 271 >gi|215919037|ref|NP_819783.2| competence lipoprotein ComL [Coxiella burnetii RSA 493] gi|206583922|gb|AAO90297.2| lipoprotein, ComL family [Coxiella burnetii RSA 493] Length = 272 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 10/235 (4%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 +DV + E++ L ++++S+A + F +PF A ++ L + Sbjct: 37 KDVDPYQAYRGKTSAELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQLDIIYA 96 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQR 153 Y A + + YI YP +NVDY YY+ G+ + + V D Sbjct: 97 YYKNNDTSSAIAAADRYIRLYPRGRNVDYAYYMRGVISFDLGLSWLQKLARVSPVSRDVS 156 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 + + + E + +S Y A + RN +A +E+ I +Y+KR YVAA R Sbjct: 157 TLQQSFTSFATLAEVFPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVAAANRG 216 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 V+ ++ + +A+A +V+AY AL L A L+Q YP AR + Sbjct: 217 SYVVQHFQGSPQVAKALAIMVQAYRALGLPKMADASNHLLQTNYPHTLEARKLRK 271 >gi|121604766|ref|YP_982095.1| hypothetical protein Pnap_1864 [Polaromonas naphthalenivorans CJ2] gi|120593735|gb|ABM37174.1| putative transmembrane protein [Polaromonas naphthalenivorans CJ2] Length = 274 Score = 238 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 10/232 (4%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 T ++Y +A + KA + + +A+++ L Sbjct: 27 SGCSSTPAPDKTATWSPNKIYAEAKDEAGSGAYDKAIPLYEKLEGRAAGTPLAQQAQLDK 86 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PY 150 A+ QY G+ QA + ++ +P S +DY YL G+ + Sbjct: 87 AYAQYKGGEQAQALATLNRFMKLHPASPAMDYALYLKGLVNFNDNLGIFGSISRQDLSER 146 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 DQ A K + +V R+ +S Y AR + N LA EV + RYY RG YVAAI Sbjct: 147 DQNAAKESFESFKELVARFPDSRYAPDARLRMNYIVNSLAKSEVHVARYYYSRGAYVAAI 206 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 R Q +A+Y D EEA L ++Y AL + + ++ ++ + YPQ + Sbjct: 207 NRAQSAIADYRDVPALEEATFILYKSYDALGMTELRDDMRRIMDKSYPQSQY 258 >gi|15837540|ref|NP_298228.1| hypothetical protein XF0938 [Xylella fastidiosa 9a5c] gi|9105861|gb|AAF83748.1|AE003932_12 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 297 Score = 238 bits (609), Expect = 6e-61, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 112/263 (42%), Gaps = 20/263 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + G R++ ++ D +Y+KA +K+ N++ A F + Sbjct: 18 LLAMLLATFVLITGCHREAKKNAD-----DGMPVEHLYDKAHTLMKKGNWAGAEVSFKRL 72 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P+ ++++ +A+ QY +GK+ A S + +I YP N+ Y+YYL G+S + Sbjct: 73 IAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYLYYLRGLSNSN 132 Query: 144 MI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 D A + +++RY NS Y A+ +T RN A E Sbjct: 133 RDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYAADAKKQMTELRNMFAQYE 192 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + YYL+R +VAA R +L Y + +A+A L EAY L A ++ Sbjct: 193 MNVTLYYLRRTAWVAAAGRANFLLETYPQSAFQYDAVAALGEAYTHLGNKTLADNARQVL 252 Query: 254 QERYPQ-----GYWARYVETLVK 271 Q P G W +Y + K Sbjct: 253 QTNAPDHPWLKGKWPKYPAAIRK 275 >gi|21232519|ref|NP_638436.1| competence lipoprotein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767397|ref|YP_242159.1| competence lipoprotein [Xanthomonas campestris pv. campestris str. 8004] gi|188990498|ref|YP_001902508.1| putative outer membrane lipoprotein [Xanthomonas campestris pv. campestris str. B100] gi|21114310|gb|AAM42360.1| competence lipoprotein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572729|gb|AAY48139.1| competence lipoprotein [Xanthomonas campestris pv. campestris str. 8004] gi|167732258|emb|CAP50450.1| putative outer membrane lipoprotein [Xanthomonas campestris pv. campestris] Length = 293 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 18/264 (6%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A I + + F+V + ++D D ++Y K +++ N++ A + + Sbjct: 11 ARLIALMLVMAFVVTGCHRGAKDKNPDEG---MPVEQLYGKGHGLMEKGNWAGAEASYKR 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +P+ ++++ +A+ QY AGK+ S + +I YP +N+ Y+YYL G++ + Sbjct: 68 LIAQYPYGPYTEQAMIETAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGLANS 127 Query: 143 QMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 D + + + + +RY NS Y AR + R+ A Sbjct: 128 NRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAPDARKRMIELRDIFAQH 187 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E++ YYL+R +V+A R +L Y + +A+A L EAY L A + + Sbjct: 188 ELDNALYYLRRDAWVSAAGRANYLLETYPQSAFQYDAVAVLAEAYTHLGNKTLAADARRV 247 Query: 253 IQERYPQ-----GYWARYVETLVK 271 ++ PQ G W +Y + K Sbjct: 248 LELNSPQHPWLTGDWPKYPWAVRK 271 >gi|209363886|ref|YP_001424166.2| lipoprotein, ComL family [Coxiella burnetii Dugway 5J108-111] gi|212218243|ref|YP_002305030.1| lipoprotein, ComL family [Coxiella burnetii CbuK_Q154] gi|207081819|gb|ABS77330.2| lipoprotein, ComL family [Coxiella burnetii Dugway 5J108-111] gi|212012505|gb|ACJ19885.1| lipoprotein, ComL family [Coxiella burnetii CbuK_Q154] Length = 272 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 10/235 (4%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 +DV + E++ L ++++S+A + F +PF A ++ L + Sbjct: 37 KDVDPYQAYRGKTSAELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQLDIIYA 96 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQR 153 Y A + + YI YP +NVDY YY+ G+ + + V D Sbjct: 97 YYKNNDTSSAIAAADRYIRLYPRGRNVDYAYYMRGVIGFDLGLSWLQKLARVSPVSRDVS 156 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 + + + E + +S Y A + RN +A +E+ I +Y+KR YVAA R Sbjct: 157 TLQQSFTSFATLAEVFPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVAAANRG 216 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 V+ ++ + +A+A +V+AY AL L A L+Q YP AR + Sbjct: 217 SYVVQHFQGSPQVAKALAIMVQAYRALGLPKMADASNHLLQTNYPHTLEARKLRK 271 >gi|261867119|ref|YP_003255041.1| lipoprotein [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412451|gb|ACX81822.1| lipoprotein [Aggregatibacter actinomycetemcomitans D11S-1] Length = 262 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 62/251 (24%), Positives = 109/251 (43%), Gaps = 20/251 (7%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 +L FAL ++AV S +DV + ++ +Y +L++ ++S+ Sbjct: 1 MRKLKSFALLTAMALAVTAC----SSSKQDV------EQAPEQTLYTTGQTYLQDGDYSQ 50 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A YFN S FP + + L + Y + Y + + +I +YP S ++DY Y Sbjct: 51 AIRYFNAVSNRFPGSSYGEQVQLNLIYAYYKSQDYSETLLTIDRFIQRYPNSSHLDYALY 110 Query: 136 LVGMSYAQMIRDVPYD----QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G++ + + + D RAT+ +V + NSPY A +T Sbjct: 111 MAGLTNSALGDNFFQDFFGVDRATRENTSIKTAFANFQNLVNHFPNSPYTPDALARMTYI 170 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 + LA E+EI ++Y KR YVA R +L Y D + +A+ + E+Y + L Sbjct: 171 KASLARHELEIAKFYFKRDAYVATANRVVSMLKLYPDTQATLDALPLMKESYEKMNLKHL 230 Query: 246 AREVVSLIQER 256 A + +I Sbjct: 231 ADQTAKVIAAN 241 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 28/70 (40%) Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 G+ YL+ G+Y AI F V + + + E+ L+ AY E + +R Sbjct: 39 GQTYLQDGDYSQAIRYFNAVSNRFPGSSYGEQVQLNLIYAYYKSQDYSETLLTIDRFIQR 98 Query: 257 YPQGYWARYV 266 YP Y Sbjct: 99 YPNSSHLDYA 108 >gi|325916248|ref|ZP_08178529.1| outer membrane assembly lipoprotein YfiO [Xanthomonas vesicatoria ATCC 35937] gi|325537542|gb|EGD09257.1| outer membrane assembly lipoprotein YfiO [Xanthomonas vesicatoria ATCC 35937] Length = 293 Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 116/264 (43%), Gaps = 18/264 (6%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A I + + F+V + ++D D ++Y K +++ N++ A + + Sbjct: 11 ARLIALMLVMAFVVTGCHRGAKDKNPDEG---MPVEQLYGKGHGLMEKGNWAGAEASYKR 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +P+ ++++ +A+ QY AGK+ S + +I YP +N+ Y+YYL G++ + Sbjct: 68 LIAQYPYGPYTEQAMIETAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGLANS 127 Query: 143 QMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 D + + + + +RY NS Y AR + R+ A Sbjct: 128 NRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAPDARKRMIELRDVFAQH 187 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E++ YYL+R +V+A R +L Y + + +A+A L EAY L A + + Sbjct: 188 ELDNALYYLRRNAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADARRV 247 Query: 253 IQERYPQ-----GYWARYVETLVK 271 ++ PQ G W +Y + K Sbjct: 248 LELNSPQHPWLTGNWPKYPWAIRK 271 >gi|18203349|sp|Q9PEU0|Y938_XYLFA RecName: Full=UPF0169 lipoprotein XF_0938; Flags: Precursor Length = 292 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 112/263 (42%), Gaps = 20/263 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + G R++ ++ D +Y+KA +K+ N++ A F + Sbjct: 13 LLAMLLATFVLITGCHREAKKNAD-----DGMPVEHLYDKAHTLMKKGNWAGAEVSFKRL 67 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P+ ++++ +A+ QY +GK+ A S + +I YP N+ Y+YYL G+S + Sbjct: 68 IAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYLYYLRGLSNSN 127 Query: 144 MI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 D A + +++RY NS Y A+ +T RN A E Sbjct: 128 RDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYAADAKKQMTELRNMFAQYE 187 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + YYL+R +VAA R +L Y + +A+A L EAY L A ++ Sbjct: 188 MNVTLYYLRRTAWVAAAGRANFLLETYPQSAFQYDAVAALGEAYTHLGNKTLADNARQVL 247 Query: 254 QERYPQ-----GYWARYVETLVK 271 Q P G W +Y + K Sbjct: 248 QTNAPDHPWLKGKWPKYPAAIRK 270 >gi|332535271|ref|ZP_08411073.1| putative component of the lipoprotein assembly complex [Pseudoalteromonas haloplanktis ANT/505] gi|332035302|gb|EGI71806.1| putative component of the lipoprotein assembly complex [Pseudoalteromonas haloplanktis ANT/505] Length = 254 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 111/249 (44%), Gaps = 12/249 (4%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 ++ K A I FS++V L ++ + +YE A L +++A Sbjct: 4 KIGKRAFAIVFSVSVLSLGACSSAPDQEDIQRVP--NKSAHALYEDAKETLDSGLYARAI 61 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E + +PF +++ + + Y +G +QA + + +I P K++DY+YY+ Sbjct: 62 ELLSAIDSRYPFGPFSKQVQMDLVYAHYQSGNTEQALATIDRFIRLNPNHKDLDYMYYMR 121 Query: 138 GMSYAQMIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+ + ++ D T++ +S +V+R+ S Y A+ + N Sbjct: 122 GLVNIKADKNAFQEYFGVDRADRDANRTRVAFTDLSTLVKRFPKSDYAPEAKRRLVWLLN 181 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 ++A E+++ YY +R Y+AA R + V+ +YS + + + A+ + ++Y L L + + Sbjct: 182 RMARYELKVATYYYEREAYLAAANRGKFVVEHYSQSSYLDPALEMMEKSYDQLGLTELSE 241 Query: 248 EVVSLIQER 256 + Sbjct: 242 HAKQTRKLN 250 >gi|160898939|ref|YP_001564521.1| putative transmembrane protein [Delftia acidovorans SPH-1] gi|160364523|gb|ABX36136.1| putative transmembrane protein [Delftia acidovorans SPH-1] Length = 263 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 95/242 (39%), Gaps = 11/242 (4%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 I SI LV + D T +Y +A F KA F + Sbjct: 4 IPLSIVPAMLVAGVLTACSSTQQD-PTAKWTPDRIYTEARDEAASGAFDKAVPLFEKLEG 62 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-- 143 +A+++ L A+ QY +G QA + + ++ +P S DY YL G+ Sbjct: 63 RAAGTPLAQQAQLDKAYAQYKSGDKIQATATLDRFLKLHPASPATDYALYLKGLVNFNDN 122 Query: 144 --------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 DQ+A K + +V R+ S Y + +R + N LA EV Sbjct: 123 LGMFSWLSRQDLSERDQKAAKDSFESFRELVTRFPESRYAEDSRLRMQYIVNSLAQYEVH 182 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + RYY RG YVAAI R Q + +Y EAM LV +Y AL + + ++ Sbjct: 183 VARYYYGRGAYVAAIARAQTAVKDYQGVPAVREAMQILVNSYDALGMTQLRDDAQRVLTA 242 Query: 256 RY 257 Y Sbjct: 243 SY 244 >gi|293390712|ref|ZP_06635046.1| lipoprotein [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951246|gb|EFE01365.1| lipoprotein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 262 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 62/251 (24%), Positives = 109/251 (43%), Gaps = 20/251 (7%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 +L FAL ++AV S +DV + ++ +Y +L++ ++S+ Sbjct: 1 MRKLKSFALLTAMALAVTAC----SSSKQDV------EQAPEQTLYTTGQTYLQDGDYSQ 50 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A YFN S FP + + L + Y + Y + + +I +YP S ++DY Y Sbjct: 51 AIRYFNAVSNRFPGSSYGEQVQLNLIYAYYKSQDYNETLLTIDRFIQRYPNSSHLDYALY 110 Query: 136 LVGMSYAQMIRDVPYD----QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G++ + + + D RAT+ +V + NSPY A +T Sbjct: 111 MAGLTNSALGDNFFQDFFGVDRATRENTSIKTAFANFQNLVNHFPNSPYTPDALARMTYI 170 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 + LA E+EI ++Y KR YVA R +L Y D + +A+ + E+Y + L Sbjct: 171 KASLARHELEIAKFYFKRDAYVATANRVVSMLKLYPDTQATLDALPLMKESYEKMNLKHL 230 Query: 246 AREVVSLIQER 256 A + +I Sbjct: 231 ADQTAQVIAAN 241 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 29/70 (41%) Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 G+ YL+ G+Y AI F V + + + E+ L+ AY +E + +R Sbjct: 39 GQTYLQDGDYSQAIRYFNAVSNRFPGSSYGEQVQLNLIYAYYKSQDYNETLLTIDRFIQR 98 Query: 257 YPQGYWARYV 266 YP Y Sbjct: 99 YPNSSHLDYA 108 >gi|289662939|ref|ZP_06484520.1| putative competence lipoprotein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 293 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 18/264 (6%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A I + + F+V + ++D D ++Y K +++ N++ A + + Sbjct: 11 ARLIALMLVMAFVVTGCHRGAKDKNPDEG---MPVEQLYGKGHDLMEKGNWAGAEASYKR 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +P+ ++++ SA+ QY AGK+ S + +I YP +N+ Y+YYL G++ + Sbjct: 68 LIAQYPYGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGLANS 127 Query: 143 QMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 D + + + + +RY NS Y AR + R+ A Sbjct: 128 NRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFAQH 187 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E++ YYL+R +V+A R +L Y + + +A+A L EAY L A + + Sbjct: 188 ELDNALYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADARRV 247 Query: 253 IQERYPQ-----GYWARYVETLVK 271 ++ PQ G W +Y + K Sbjct: 248 LELNDPQHPWLTGNWPKYPWAIRK 271 >gi|255019803|ref|ZP_05291879.1| Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Acidithiobacillus caldus ATCC 51756] gi|254970732|gb|EET28218.1| Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Acidithiobacillus caldus ATCC 51756] Length = 249 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 61/242 (25%), Positives = 112/242 (46%), Gaps = 2/242 (0%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVR--YQREVYEKAVLFLKEQNFSKAYEYFNQ 82 IF +A L+G + D DS+ + +Y A ++S A + + Sbjct: 5 IIFPIVAHLTLLGVLSGCASDGAKDSLKESSHLSAAAMYRPAKAAQDRGDYSSAVRLYEE 64 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +P+ A ++ L +A+ Y G + AA+ E +I +P + VDY +YL G++Y Sbjct: 65 LETRYPYGPYAEQAQLNTAYCYYKQGDSEAAAAAAERFIKLHPVNPFVDYAWYLKGIAYY 124 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 Q I+ ++ + + + +V+R+ NS Y AR + + L +E++I ++Y Sbjct: 125 QAIQGAQWNPKPLEESFATLETLVKRWPNSAYAADARLRMEKIIDILGQRELDICKFYYI 184 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 R YVAA R V+ Y + EEA+ L +Y + L A+ +++ YPQ + Sbjct: 185 RHAYVAAANRCNDVVTRYQLSPAREEALYYLSLSYRHMNLDGLAKTTAGVLKANYPQSKY 244 Query: 263 AR 264 + Sbjct: 245 LK 246 >gi|90408472|ref|ZP_01216631.1| hypothetical protein PCNPT3_03216 [Psychromonas sp. CNPT3] gi|90310404|gb|EAS38530.1| hypothetical protein PCNPT3_03216 [Psychromonas sp. CNPT3] Length = 241 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 108/240 (45%), Gaps = 14/240 (5%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 V F+ + ++ + +Y+ A L+ N+ KA E +PF Sbjct: 3 VLFISSCSSSKTEKPKVED----KPPSVLYQDAKAQLQAANYEKASEILEALDSRYPFGP 58 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS-------YAQM 144 + + L + Y + A + + ++ P ++DY+YY+ G++ + Q Sbjct: 59 HSDQVQLDLIYSYYKRDESALALANIDRFMRLNPTHPDLDYLYYMRGLTQIAADQEFFQS 118 Query: 145 ---IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 I D + S++V+ Y S Y A+ ++ +++LA E+ I ++Y Sbjct: 119 LFNIERFDRDPSHALQAFKDFSQLVKFYPKSQYAADAQLHLIDIKSRLARYELSIAKWYF 178 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 KR Y+A+I R +++L NY D++ E+A+ +++ Y L L+ +++++ YP+ Sbjct: 179 KREAYIASINRTKIILNNYPDSDSIEDALVLMIKGYERLNLVTPKTNALAILKMNYPKNR 238 >gi|289667067|ref|ZP_06488142.1| putative competence lipoprotein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 293 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 18/264 (6%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A I + + F+V + ++D D ++Y K +++ N++ A + + Sbjct: 11 ARLIALMLVMAFVVTGCHRGAKDKNPDEG---MPVEQLYGKGHDLMEKGNWAGAEASYKR 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +P+ ++++ SA+ QY AGK+ S + +I YP +N+ Y+YYL G++ + Sbjct: 68 LIAQYPYGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGLANS 127 Query: 143 QMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 D + + + + +RY NS Y AR + R+ A Sbjct: 128 NRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFAQH 187 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E++ YYL+R +V+A R +L Y + + +A+A L EAY L A + + Sbjct: 188 ELDNALYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAMLAEAYTHLGNKTLAADARRV 247 Query: 253 IQERYPQ-----GYWARYVETLVK 271 ++ PQ G W +Y + K Sbjct: 248 LELNDPQHPWLTGNWPKYPWAIRK 271 >gi|121611397|ref|YP_999204.1| hypothetical protein Veis_4485 [Verminephrobacter eiseniae EF01-2] gi|121556037|gb|ABM60186.1| putative transmembrane protein [Verminephrobacter eiseniae EF01-2] Length = 265 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 10/224 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + T + +A + + KA + +A+++ + A+ Y +G Sbjct: 26 EDRTAGWSTERIRAEAQDEMSSGAYDKAVPLLEKLEGRAAGTPLAQQAQIDKAYAHYKSG 85 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ----------MIRDVPYDQRATKLM 158 + QA + + ++ +P S +DY YL G++ DQ+A K Sbjct: 86 EKAQAVATLDRFMKLHPVSPALDYALYLKGLANFNDNLGLFSFISREDLSERDQQAAKDS 145 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + +V R+ S Y + AR +T N LA EV + RYY G YVAAI R L L+ Sbjct: 146 FEAFRELVNRFPQSRYAQDARQRMTYIVNSLAQYEVHVARYYYLHGAYVAAIGRAHLALS 205 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 +Y EEA+ L+++Y AL + + ++ + YPQ + Sbjct: 206 DYQGVPAQEEALYILIQSYDALGMTALRDDARRVMDKSYPQSSF 249 >gi|261856620|ref|YP_003263903.1| outer membrane assembly lipoprotein YfiO [Halothiobacillus neapolitanus c2] gi|261837089|gb|ACX96856.1| outer membrane assembly lipoprotein YfiO [Halothiobacillus neapolitanus c2] Length = 273 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 12/247 (4%) Query: 21 KFALTIFFSIAVCFLVGWE--RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 K I + A+ G ++S + ++Y++A ++ ++ A + Sbjct: 15 KLYSGILLAAAIGLTSGCSWFSKNSDQDQAELADPTVSAAQLYDEASSAMRRDDYGTAIK 74 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F +PF ++ L A+ Y + A + + YI +P+ KNVDY Y+ G Sbjct: 75 KFETLEGRYPFGAYTEQAQLEVAYAYYKYNEPDSAIAAADRYIQIHPQGKNVDYALYIKG 134 Query: 139 MSYAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 +S + DQ S +V R+ +S YV A + RN Sbjct: 135 LSNMDRGDSLINKIAKPNLAYRDQSILHNAYAAFSELVTRFPDSKYVDDASVRLIKIRND 194 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ + RYY+KRG ++AA R Q L+ Y+ + A+ L+ AY L L EA + Sbjct: 195 LAEHEIYVARYYMKRGAWLAAANRAQTALSKYNGSTSTIPALEILISAYKKLGLKTEAAD 254 Query: 249 VVSLIQE 255 +++ Sbjct: 255 AEQILKA 261 >gi|58581219|ref|YP_200235.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623137|ref|YP_450509.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58425813|gb|AAW74850.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367077|dbj|BAE68235.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 293 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 116/264 (43%), Gaps = 18/264 (6%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A I + + F+V + ++D D ++Y KA +++ N++ A F Sbjct: 11 ARLIALMLVMAFVVTGCHRGAKDKNPDEG---MPVEQLYGKAHNLMEKGNWAGAEASFKH 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +P+ ++++ SA+ QY AGK+ S + +I YP +N+ Y+YYL G++ + Sbjct: 68 LIAQYPYGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNIAYLYYLRGLANS 127 Query: 143 QMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 D + + + + +RY NS Y AR + R+ A Sbjct: 128 NRDTVFLRHVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFAQH 187 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E++ YYL+R +V+A R +L Y + + +A+A L EAY L A + + Sbjct: 188 ELDNALYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADARRV 247 Query: 253 IQERYPQ-----GYWARYVETLVK 271 ++ P+ G W +Y + K Sbjct: 248 LELNDPKHPWLTGNWPKYPLVIRK 271 >gi|332525785|ref|ZP_08401929.1| hypothetical protein RBXJA2T_08043 [Rubrivivax benzoatilyticus JA2] gi|332109339|gb|EGJ10262.1| hypothetical protein RBXJA2T_08043 [Rubrivivax benzoatilyticus JA2] Length = 253 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 16/241 (6%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 L G + + ++Y A ++ ++ A + ++ Sbjct: 3 ATLLAGCGSTTKEER------ADVAAEKLYADAKDNMEAGSYEPAIKALSRVEGLAAGTV 56 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-------- 143 +A++S + A++ + G+ QA + E +I P S +DY YL G+ Sbjct: 57 LAQQSQIDLAYLYWKTGERAQALTTIERFIRLNPSSPALDYAMYLRGLINFNEDMGLFGR 116 Query: 144 --MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 DQRA + Q ++VE++ S Y A+ + N LAA EV + RYY Sbjct: 117 IARQDLSERDQRAARDAYQAFKQLVEQFPQSRYTPDAKLRMDYIVNSLAAYEVHVARYYF 176 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 KRG YVAA R Q +A + + AEE + +V++Y L L+ + + ++Q+ YP Sbjct: 177 KRGAYVAAANRAQQAVAEFQRSPAAEEGLFLMVQSYDRLQLVQLRDDALRVLQKNYPDSR 236 Query: 262 W 262 + Sbjct: 237 F 237 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 42/120 (35%), Gaps = 22/120 (18%) Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFV--------------QYSAGKYQQAASLGEEY 120 AY+ F Q FP + + L ++ + G Y AA+ ++ Sbjct: 132 DAYQAFKQLVEQFPQSRYTPDAKLRMDYIVNSLAAYEVHVARYYFKRGAYVAAANRAQQA 191 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + ++ S + +L+ SY ++ D + + + Y +S ++ A Sbjct: 192 VAEFQRSPAAEEGLFLMVQSYDRLQLVQLRD--------DALRVLQKNYPDSRFLAQAIE 243 >gi|251793937|ref|YP_003008669.1| lipoprotein [Aggregatibacter aphrophilus NJ8700] gi|247535336|gb|ACS98582.1| lipoprotein [Aggregatibacter aphrophilus NJ8700] Length = 264 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 20/251 (7%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 +L FAL ++AV G S +DV + ++ +Y +L+E ++S+ Sbjct: 1 MRKLKSFALLTAMALAVTACSG----SKQDV------EQAPEQTLYSIGQNYLQEGDYSQ 50 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A Y + FP + + + L + Y + Y + + +I ++P S ++DY Y Sbjct: 51 AIRYLTAVNNRFPGSSYSEQVQLNLIYAYYKSQDYTETLVTVDRFIQRFPNSNHLDYALY 110 Query: 136 LVGMSYAQMIRDVPYD----QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G++ + + + D RAT+ +V+ + NSPY A + Sbjct: 111 MAGLTNSALGDNFFQDFFGVDRATRENTSIKTAFANFQTLVQHFPNSPYTPDALARMAYI 170 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 + LA E++I ++Y KR YVA R +L Y D + +A+ + E+Y + L Sbjct: 171 KASLARHELDIAKFYFKRDAYVATANRVVSMLKLYPDTQATLDALPLMKESYERMNLKQL 230 Query: 246 AREVVSLIQER 256 A + +I Sbjct: 231 ADQTARIIAAN 241 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 29/73 (39%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 IG+ YL+ G+Y AI V + + ++E+ L+ AY E V Sbjct: 36 YSIGQNYLQEGDYSQAIRYLTAVNNRFPGSSYSEQVQLNLIYAYYKSQDYTETLVTVDRF 95 Query: 254 QERYPQGYWARYV 266 +R+P Y Sbjct: 96 IQRFPNSNHLDYA 108 >gi|166713129|ref|ZP_02244336.1| competence lipoprotein [Xanthomonas oryzae pv. oryzicola BLS256] Length = 293 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 117/264 (44%), Gaps = 18/264 (6%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A I + + F+V + ++D D ++Y KA +++ N++ A F + Sbjct: 11 ARLIALMLVMAFVVTGCHRGAKDKNPDEG---MPVEQLYGKAHNLMEKGNWAGAEASFKR 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +P+ ++++ SA+ QY AGK+ S + +I YP +N+ Y+YYL G++ + Sbjct: 68 LIAQYPYGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNIAYLYYLRGLANS 127 Query: 143 QMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 D + + + + +RY NS Y AR + R+ A Sbjct: 128 NRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFAQH 187 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E++ YYL+R +V+A R +L Y + + +A+A L EAY L A + + Sbjct: 188 ELDDALYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADARRV 247 Query: 253 IQERYPQ-----GYWARYVETLVK 271 ++ P+ G W +Y + K Sbjct: 248 LELNDPKHPWLTGNWPKYPLVIRK 271 >gi|161830296|ref|YP_001596931.1| competence lipoprotein ComL [Coxiella burnetii RSA 331] gi|161762163|gb|ABX77805.1| competence lipoprotein ComL [Coxiella burnetii RSA 331] Length = 255 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 10/235 (4%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 +DV + E++ L ++++S+A + F +PF A ++ L + Sbjct: 20 KDVDPYQAYRGKTSAELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQLDIIYA 79 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQR 153 Y A + + YI YP +NVDY YY+ G+ + + V D Sbjct: 80 YYKNNDTSSAIAAADRYIRLYPRGRNVDYAYYMRGVISFDLGLSWLQKLARVSPVSRDVS 139 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 + + + E + +S Y A + RN +A +E+ I +Y+KR YVAA R Sbjct: 140 TLQQSFTSFATLAEVFPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVAAANRG 199 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 V+ ++ + +A+A +V+AY AL L A L+Q YP AR + Sbjct: 200 SYVVQHFQGSPQVAKALAIMVQAYRALGLPKMADASNHLLQTNYPHTLEARKLRK 254 >gi|315126098|ref|YP_004068101.1| TPR repeat-containing lipoprotein [Pseudoalteromonas sp. SM9913] gi|315014612|gb|ADT67950.1| TPR repeat-containing lipoprotein [Pseudoalteromonas sp. SM9913] Length = 254 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 114/249 (45%), Gaps = 12/249 (4%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 ++ K A I FS++V L ++ R + +YE A L +++A Sbjct: 4 KIGKRAFAIVFSVSVLSLGACSSAPDQEDIQRVP--NRSAQALYEDAKQTLDSGLYARAI 61 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E +PF +++ + + Y +G +QA + + +I P K++DY+YY+ Sbjct: 62 ELLTAIDSRYPFGPFSKQVQMDLVYAHYQSGNTEQALATIDRFIRLNPNHKDLDYMYYMR 121 Query: 138 GMSYAQMIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+ + ++ D + T++ +S +V+R+ S Y A+ + N Sbjct: 122 GLVNIKADKNAFQEYFGVDRADRDAKRTRVAYTDLSTLVKRFPESDYAPEAKRRLVWLLN 181 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 ++A E+++ YY +R Y+AA R + V+ +YS + + + A+A + ++Y L L + ++ Sbjct: 182 RMARYELKVATYYYEREAYLAAANRGKYVVEHYSQSSYLDAALAMMEKSYEKLGLTELSQ 241 Query: 248 EVVSLIQER 256 + Sbjct: 242 HAEQTRKFN 250 >gi|77359879|ref|YP_339454.1| TPR repeat-containing lipoprotein [Pseudoalteromonas haloplanktis TAC125] gi|76874790|emb|CAI86011.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain [Pseudoalteromonas haloplanktis TAC125] Length = 254 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 110/244 (45%), Gaps = 12/244 (4%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 ++ K A I FS++V L ++ + +YE A L +++A Sbjct: 4 KIGKRAFAIVFSVSVLSLGACSSAPDQEDIQRVP--NKSAHALYEDAKQTLDSGLYARAI 61 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E + +PF +++ + + Y +G +QA + + +I P K++DY+YY+ Sbjct: 62 ELLSAIDSRYPFGPFSKQVQMDLVYAHYQSGNTEQALATIDRFIRLNPNHKDLDYMYYMR 121 Query: 138 GMSYAQMIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+ + ++ D T++ +S +V+R+ S Y A+ + N Sbjct: 122 GLVNIKADKNAFQEYFGVDRADRDANRTRVAFTDLSTLVKRFPQSDYAPEAKRRLVWLLN 181 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 ++A E+++ YY +R Y+AA R + V+ +YS + + A+ + ++Y L L + + Sbjct: 182 RMARYELKVATYYYEREAYLAAANRGKFVVEHYSQSSYLNSALEMMEKSYDKLGLSELSE 241 Query: 248 EVVS 251 + Sbjct: 242 DAKQ 245 >gi|120553809|ref|YP_958160.1| DNA uptake lipoprotein [Marinobacter aquaeolei VT8] gi|120323658|gb|ABM17973.1| DNA uptake lipoprotein [Marinobacter aquaeolei VT8] Length = 277 Score = 235 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 102/219 (46%), Gaps = 10/219 (4%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 +V ++ YE A + NF++A + + +PF A ++ L F +Y + Sbjct: 27 EVLPEQTYYENAREAMNSGNFNEAEQNLDALETYYPFGRYAEQAQLDLIFARYQNLDLEG 86 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYM 162 + + + +I P+S+++DY Y+ G++ + + + + Sbjct: 87 SRAAADRFIRLNPQSEHLDYALYMRGLASYNLDLGLATRYFPVDAAARNPGEQLQAFRDF 146 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 S+++ R+ +S Y AR + RN++A E+ RYY+KR YVAA R + V+ NY Sbjct: 147 SQLLNRFPDSDYALDARQRMIAIRNRMAELELHAARYYIKREAYVAANNRARYVVENYPS 206 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + EEA+ + + + L L A + ++ +++ +P Sbjct: 207 SPSVEEALMIMADTFRFLELKKGANDAIATLRKNFPNSD 245 >gi|152977724|ref|YP_001343353.1| TPR repeat-containing protein [Actinobacillus succinogenes 130Z] gi|150839447|gb|ABR73418.1| TPR-repeat-containing protein [Actinobacillus succinogenes 130Z] Length = 270 Score = 235 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 10/214 (4%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + ++E++ K +++E N+S A +Y FP + + ++ L + Y Y Sbjct: 27 EQASEQELFTKGQAYVQEGNYSDATKYLQAVDSRFPGSDYSEQAELNLIYAAYRNQDYTT 86 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYM 162 A + ++ +P+S++ DYV Y+ ++ M I + + K Sbjct: 87 ALVTADRFLQLHPQSQHTDYVLYMAALTNMSMGDNFIQDFFGIDRASRESTSMKTAFGNF 146 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 +V+ + NSPY A + +++LA E+EI ++Y KR +VA R +L Y D Sbjct: 147 QTLVQHFPNSPYTPDAITRMAYIKDRLARHELEIAKFYAKRNAWVAVSNRVTGMLQTYPD 206 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +A+ L +AY + L ++ +L++ Sbjct: 207 TNATLQALPLLEKAYHEMGLTQLEQKAATLVKAN 240 >gi|315634973|ref|ZP_07890254.1| DNA uptake lipoprotein [Aggregatibacter segnis ATCC 33393] gi|315476235|gb|EFU66986.1| DNA uptake lipoprotein [Aggregatibacter segnis ATCC 33393] Length = 261 Score = 235 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 20/251 (7%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 +L FAL ++AV S +DV + ++ +Y +L++ ++S+ Sbjct: 1 MRKLKSFALLTAMALAVTAC----SSSKQDV------EQAPEQTLYSTGQTYLQDGDYSQ 50 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A Y N S FP + + + L + Y Y + + +I ++P S ++DY Y Sbjct: 51 AIRYLNAVSSRFPGSSYSEQVQLNLIYAYYKTQDYSETLVTIDRFIQRFPNSSHLDYALY 110 Query: 136 LVGMSYAQMIRDVPYD----QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G++ + + + D RAT+ +V+ + NSPY A +T Sbjct: 111 MAGLTNSALGDNFFQDFFGVDRATRENTSIKTAFANFQNLVQHFPNSPYTPDALARMTYI 170 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 + LA E+ I ++Y KR YVA R +L Y D + +A+ + +Y + L Sbjct: 171 KASLARHELAIAKFYFKRDAYVATANRVVSMLKLYPDTQATLDALPLMKASYEKMNLTHL 230 Query: 246 AREVVSLIQER 256 A + +I Sbjct: 231 ADQTAKIIAAN 241 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 29/73 (39%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 G+ YL+ G+Y AI V + + + ++E+ L+ AY E + Sbjct: 36 YSTGQTYLQDGDYSQAIRYLNAVSSRFPGSSYSEQVQLNLIYAYYKTQDYSETLVTIDRF 95 Query: 254 QERYPQGYWARYV 266 +R+P Y Sbjct: 96 IQRFPNSSHLDYA 108 >gi|153209399|ref|ZP_01947385.1| competence lipoprotein ComL [Coxiella burnetii 'MSU Goat Q177'] gi|120575370|gb|EAX31994.1| competence lipoprotein ComL [Coxiella burnetii 'MSU Goat Q177'] Length = 255 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 10/235 (4%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 +DV + E++ L ++++S+A + F +PF A ++ L + Sbjct: 20 KDVDPYQAYRGKTSAELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQLDIIYA 79 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQR 153 Y A + + YI YP +NVDY YY+ G+ + + V D Sbjct: 80 YYKNNDTSSAIAAADRYIRLYPRGRNVDYAYYMRGVIGFDLGLSWLQKLARVSPVSRDVS 139 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 + + + E + +S Y A + RN +A +E+ I +Y+KR YVAA R Sbjct: 140 TLQQSFTSFATLAEVFPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVAAANRG 199 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 V+ ++ + +A+A +V+AY AL L A L+Q YP AR + Sbjct: 200 SYVVQHFQGSPQVAKALAIMVQAYRALGLPKMADASNHLLQTNYPHTLEARKLRK 254 >gi|212212776|ref|YP_002303712.1| lipoprotein, ComL family [Coxiella burnetii CbuG_Q212] gi|212011186|gb|ACJ18567.1| lipoprotein, ComL family [Coxiella burnetii CbuG_Q212] Length = 272 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 10/235 (4%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 +DV + E++ L ++++S+A + F +PF A ++ L + Sbjct: 37 KDVDPYQAYRGKTSAELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQLDIIYA 96 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQR 153 Y A + + YI YP +NVDY YY+ G+ + + V D Sbjct: 97 YYKNNDTSSAIAAADRYIWLYPRGRNVDYAYYMRGVIGFDLGLSWLQKLARVSPVSRDIS 156 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 + + + E + +S Y A + RN +A +E+ I +Y+KR YVAA R Sbjct: 157 TLQQSFTSFATLAEVFPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVAAANRG 216 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 V+ ++ + +A+A +V+AY AL L A L+Q YP AR + Sbjct: 217 SYVVQHFQGSPQVAKALAIMVQAYRALGLPKMADVSNHLLQTNYPHTLEARKLRK 271 >gi|332970081|gb|EGK09078.1| competence lipoprotein ComL [Kingella kingae ATCC 23330] Length = 268 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 104/260 (40%), Gaps = 13/260 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + KF L I + A+ S+D L T ++Y +A L + N+++A Sbjct: 1 MKKFLLVISVAAALSACASNASTVSKDAQL---TQNWSNDQLYSEARQELNDGNYTRATA 57 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + +SL+ SA+ + + +A + YP S ++DY YL G Sbjct: 58 LYELLRARQADGRYTEQSLIESAYAHFKNEEPAKALQNLARFEQNYPASVDMDYALYLKG 117 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + D A + + ++V RY NS Y + AR + + Sbjct: 118 LVLFAEDQSFLRRLASQDWSDRDPEANRRAFRVFEQLVNRYPNSKYAEDARKRMAQLVDA 177 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ I RYY KR Y+AA R Q +L + + + EEA+A +V Y + D A Sbjct: 178 LGGHEIAIARYYAKRTAYLAANNRAQRILEQFQNTRYVEEALAIMVYTYEQMGNADMAEA 237 Query: 249 VVSLIQERYPQGYWARYVET 268 ++ + P + + Sbjct: 238 TRRVLAQNLPNSPYLQQAWK 257 >gi|325921579|ref|ZP_08183424.1| outer membrane assembly lipoprotein YfiO [Xanthomonas gardneri ATCC 19865] gi|325547933|gb|EGD18942.1| outer membrane assembly lipoprotein YfiO [Xanthomonas gardneri ATCC 19865] Length = 293 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 117/264 (44%), Gaps = 18/264 (6%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A I + + F+V + +++ D ++Y K+ +++ N++ A + + Sbjct: 11 ARLIALMLVMAFVVTGCHRGAKNKNPDEG---MPVEQLYGKSHGLMEKGNWAGAEASYKR 67 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +P+ ++++ +A+ QY AGK+ S + +I YP +N+ Y+YYL G++ + Sbjct: 68 LIAQYPYGPYTEQAMIETAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGLANS 127 Query: 143 QMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 D + + + + +RY NS Y AR + R+ A Sbjct: 128 NRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAPDARKRMIELRDVFAQH 187 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E++ YYL+R +V+A R +L Y + + +A+A L EAY L A + + Sbjct: 188 ELDNALYYLRRNAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADARRV 247 Query: 253 IQERYPQ-----GYWARYVETLVK 271 ++ PQ G W +Y + K Sbjct: 248 LELNSPQHPWLTGNWPKYPWAIRK 271 >gi|254499158|ref|ZP_05111842.1| hypothetical protein LDG_3116 [Legionella drancourtii LLAP12] gi|254351619|gb|EET10470.1| hypothetical protein LDG_3116 [Legionella drancourtii LLAP12] Length = 259 Score = 235 bits (599), Expect = 7e-60, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 10/247 (4%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K +F + L + ++D + +++ + L++ ++ A + Sbjct: 2 KRIQVLFLVGLLVSLSSCKTWWNKDDEDKNPFKGMSAEQLHTDSQKALRKGEYASAIKRL 61 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 +PF+ S + + Y Y AA+ E +I YP +KNVDY YY+ G++ Sbjct: 62 EAIETMYPFSDYTESSQMDLIYAYYKNEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLA 121 Query: 141 YAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 Q R V D + +++++ S Y A + RN A Sbjct: 122 NFQQTRGVFAKVLPLDESWRDPGTQTQAYSDFAVLIQKFPESKYKANALQRMIYLRNMFA 181 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 +E+ + ++Y KR YVAAI R ++ NY A A++A+ + ++ VAL L A EV Sbjct: 182 QQELNVSKFYFKRKMYVAAIERASYLVKNYPQAPSAQQALVIMYKSNVALGLNKTAEEVK 241 Query: 251 SLIQERY 257 ++ Q Y Sbjct: 242 TVYQATY 248 Score = 42.0 bits (98), Expect = 0.094, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 28/70 (40%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++GEY +AI R + + Y +++ E + L+ AY A YP+ Sbjct: 49 LRKGEYASAIKRLEAIETMYPFSDYTESSQMDLIYAYYKNEDYPSAAATAERFIHLYPRA 108 Query: 261 YWARYVETLV 270 Y + Sbjct: 109 KNVDYAYYMR 118 Score = 35.1 bits (80), Expect = 9.6, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 50/150 (33%), Gaps = 40/150 (26%) Query: 137 VGMSYAQMIRDVPYDQRATKL-----MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 GMS Q+ D Q+A + ++ + I Y S Y + ++ + Sbjct: 34 KGMSAEQLHTDS---QKALRKGEYASAIKRLEAIETMYPFSDYTESSQMDLIYA------ 84 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR------------------L 233 Y K +Y +A + + Y A++ + A L Sbjct: 85 --------YYKNEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLANFQQTRGVFAKVLPL 136 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWA 263 E++ +A +++ +++P+ + Sbjct: 137 DESWRDPGTQTQAYSDFAVLIQKFPESKYK 166 >gi|88811116|ref|ZP_01126372.1| probable transmembrane protein [Nitrococcus mobilis Nb-231] gi|88791655|gb|EAR22766.1| probable transmembrane protein [Nitrococcus mobilis Nb-231] Length = 251 Score = 235 bits (599), Expect = 7e-60, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 10/220 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D + +Y+KA L ++ A + +PF + ++ L + Y A Sbjct: 23 DEPEQSQQAATLYDKARELLDAGDYMAAVKRLEDLQAQYPFGPYSEQAQLNIIYAYYKAN 82 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158 A + + +I P V Y YY+ G++ + + D + Sbjct: 83 DTVSAVAAADRFIRFNPRHAKVAYAYYMKGVAQQEQGLGFIQSLLHMDRAKRDPEPLRQA 142 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++E Y S Y AR + R+ LA E++I +YY++RG +VAAI R + V+ Sbjct: 143 FYSFRSLLEAYPESRYADDARQRMAQLRDLLAQHELQICQYYIRRGAWVAAINRARSVVL 202 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 +Y+ EA+ L++ Y + L +V +++ YP Sbjct: 203 DYAGTPAVAEALHLLLQGYQHIELPALKEDVRRVLRLNYP 242 >gi|285017489|ref|YP_003375200.1| lipoprotein precursor [Xanthomonas albilineans GPE PC73] gi|283472707|emb|CBA15212.1| putative lipoprotein precursor [Xanthomonas albilineans] Length = 291 Score = 235 bits (599), Expect = 7e-60, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 109/263 (41%), Gaps = 21/263 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 + + G R + ++Y+K ++ N+S A F + Sbjct: 14 FIALLLVTLVVATGCHRHKKD------PEEGMPVEQLYQKGHAQMESGNWSGADHSFKRL 67 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P+ ++++ SA+ QY AGK+ A S + +I YP +N+ Y+YYL G+S + Sbjct: 68 IAQYPYGQYTEQAMIESAYAQYKAGKHDDAVSTIDRFIRTYPTQRNIAYMYYLRGLSNSN 127 Query: 144 MI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 D + + + +RY NS Y AR + RN A E Sbjct: 128 RDTVFLRRLWSLDPSRRDLSTPQQAYADFNTVTDRYPNSRYAADARERMIALRNVFAQHE 187 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 ++ YYL+RG +V+A R +L Y + +A+A L +AY L A + ++ Sbjct: 188 LDNALYYLRRGAWVSATSRANYLLETYPQSAFQYDAVAVLADAYTHLGNKALAADARRVL 247 Query: 254 QERYPQ-----GYWARYVETLVK 271 + P+ G W +Y + K Sbjct: 248 ELNDPKHPWLSGQWPKYPWMIRK 270 >gi|325265796|ref|ZP_08132483.1| competence lipoprotein ComL [Kingella denitrificans ATCC 33394] gi|324982779|gb|EGC18404.1| competence lipoprotein ComL [Kingella denitrificans ATCC 33394] Length = 268 Score = 235 bits (599), Expect = 7e-60, Method: Composition-based stats. Identities = 58/253 (22%), Positives = 101/253 (39%), Gaps = 10/253 (3%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + SI + L ++ ++ +Y +A L N+S A + Sbjct: 4 IVAASIVMAILSACATPNATVSKDAQMSKDWSNDRLYSEARNALNSGNYSHANALYGVLR 63 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 P +SLL SA+ Y + QA +L + YP S ++DY YL G+ + Sbjct: 64 ARQPDGRYTEQSLLDSAYAHYKNEEMSQALALLSRFERNYPASVDMDYALYLKGLIFFAE 123 Query: 145 IRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 + D A + + ++V R+ S Y + +R + + L E+ Sbjct: 124 DQSFLRKLASQDWSDRDPEANRRAFRVFEQLVNRFPQSKYAEDSRRRMAQLVDALGGHEI 183 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 I RYY KR YVAA R Q VL Y + + EEA+A ++ +Y + A + ++Q Sbjct: 184 AIARYYAKRHAYVAANNRAQRVLQQYQNTRYVEEALAIMIFSYEKMGNTQLADDTRRVLQ 243 Query: 255 ERYPQGYWARYVE 267 + + + Sbjct: 244 QNFANSPYLAKSW 256 >gi|47779343|gb|AAT38572.1| predicted secreted lipoprotein [uncultured gamma proteobacterium eBACHOT4E07] Length = 272 Score = 234 bits (598), Expect = 9e-60, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 101/252 (40%), Gaps = 17/252 (6%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 K T+ F + + ++ + ++ + ++ Y++A + N+ Sbjct: 1 MKDFKKNIKTLIFGLFLTLIIAGCKSDGEEIE-------QPEKIYYDQAQARMSSGNYFG 53 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A E +PF A ++ + + + + + A S E++I +P N+DY Y+ Sbjct: 54 AIESLEAIDTRYPFGKYAEQAQIELIYAHFMNTETEAAHSAAEKFIRLHPRHPNIDYAYF 113 Query: 136 LVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G+S RD+ D K ++ + R+ +S YV A+ Sbjct: 114 MKGLSSYTRDRDLLIRFTDTDISNRDVSGAKASFAELTEFITRFPDSQYVSYAKQRNIYL 173 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 RN +A E+ YYL ++ AI R V+ N ++ A+ L E+Y AL + Sbjct: 174 RNLIAKSELSAADYYLTIDAHIGAIRRANYVIENIPNSSENYRALKILEESYEALGYTEL 233 Query: 246 AREVVSLIQERY 257 ++ ++ Y Sbjct: 234 LEDIRQVLSSNY 245 >gi|15603585|ref|NP_246659.1| hypothetical protein PM1720 [Pasteurella multocida subsp. multocida str. Pm70] gi|18202811|sp|Q9CKA5|Y1720_PASMU RecName: Full=UPF0169 lipoprotein PM1720; Flags: Precursor gi|12722132|gb|AAK03804.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 260 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 18/248 (7%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K F ++ + + R ++E+Y L+ ++S+A Sbjct: 1 MRKLKSFTFIALTAFAITACSGSKD--------VEQRPEQELYNVGQTHLQNGDYSQAIR 52 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 Y + FP + + ++LL + Y Y Q L + + QYP S+N+DYV Y+ G Sbjct: 53 YLDAVRSRFPGSSYSEQTLLNLIYANYKTQDYTQTLVLADRFFQQYPTSRNLDYVLYMAG 112 Query: 139 MSYA----QMIRDVPYDQRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ A I+D+ RAT+ +V+ + NSPY + A + + Sbjct: 113 LTNAALGDNYIQDLFRIDRATRESSSIKAAFANFQTLVQNFPNSPYAQDALARMAYIKAS 172 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+ I ++Y KR +VA R +L Y D + EA+ + EAY + L D A + Sbjct: 173 LARHELAIAKFYAKRDAHVAVANRVVGMLQQYPDTQATYEALPLMQEAYEKMNLNDLAAK 232 Query: 249 VVSLIQER 256 ++I+ Sbjct: 233 TAAIIEAN 240 >gi|238021800|ref|ZP_04602226.1| hypothetical protein GCWU000324_01703 [Kingella oralis ATCC 51147] gi|237866414|gb|EEP67456.1| hypothetical protein GCWU000324_01703 [Kingella oralis ATCC 51147] Length = 276 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 109/255 (42%), Gaps = 11/255 (4%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAY 77 + K L I ++A+ ++ + D++ ++Y +A L +N+ +A Sbjct: 5 MKKSLLFIALAVALTGCAFKDKAKKVKIDSDTIAAQNWSNDQLYNEARSELNAKNYDRAN 64 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + + +SLL +A+ Y + +A +L + YP S ++DY YL Sbjct: 65 KLYEILRARQAPGRYTEQSLLDAAYAHYKNEEPAKALALLSRFEHNYPASIDMDYALYLR 124 Query: 138 GMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+ + D +A + + + +V RY +S Y + AR + + Sbjct: 125 GLVLFDEDQSFLRKLASQDWSDRDPQANRRAYRVFNELVTRYPDSKYAEDARKRMAQLVD 184 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 L ++ I +YY KRG Y+AA R Q V+ + + EEA+A + Y + A Sbjct: 185 ALGGHQIAIAKYYAKRGAYLAANNRAQEVIKQFQNTRFVEEALAIMAYTYGKMGNEQSAN 244 Query: 248 EVVSLIQERYPQGYW 262 + ++Q+ +PQ + Sbjct: 245 DTKRVLQQNFPQSPY 259 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 22/117 (18%) Query: 75 KAYEYFNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEY 120 +AY FN+ +P + A + + A G Y A + +E Sbjct: 154 RAYRVFNELVTRYPDSKYAEDARKRMAQLVDALGGHQIAIAKYYAKRGAYLAANNRAQEV 213 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 I Q+ ++ V+ ++ +Y +M + + + + + SPY++ Sbjct: 214 IKQFQNTRFVEEALAIMAYTYGKMGNE--------QSANDTKRVLQQNFPQSPYLQQ 262 >gi|198282732|ref|YP_002219053.1| outer membrane assembly lipoprotein YfiO [Acidithiobacillus ferrooxidans ATCC 53993] gi|198247253|gb|ACH82846.1| outer membrane assembly lipoprotein YfiO [Acidithiobacillus ferrooxidans ATCC 53993] Length = 261 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 108/246 (43%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y+L F C + S+ + +S R +++ A + +++ A Sbjct: 5 YRLLSFMSKRILMSLCCAALIAGCASTPNNPDNSAVSHESARALFQPAKHAMDRGDYAAA 64 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + F +P+ A ++ L +A+ Y G + AA+ E +I +P + VDY +YL Sbjct: 65 IKLFEDLETRYPYGPYAEQAQLDTAYSYYQRGDSEAAAAAAERFIKLHPANPYVDYAWYL 124 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 G++Y Q I+ + R + + + +R+ +S Y AR + N L + ++I Sbjct: 125 KGIAYYQAIQGAQENPRPAEEAFSTLDTLAKRWPHSVYAADARLRMAKIINILGQRNLDI 184 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 ++Y R YVA+ R V+ Y + EEA+ L Y L L A+ V+++ Sbjct: 185 CKFYYVRHAYVASANRCNTVITRYQLSTAREEALYYLTRDYRHLDLPQLAQTTVAVLAYN 244 Query: 257 YPQGYW 262 YP + Sbjct: 245 YPGSKY 250 Score = 37.8 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 27/69 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + RG+Y AAI F+ + Y +AE+A +Y + A + +P Sbjct: 56 MDRGDYAAAIKLFEDLETRYPYGPYAEQAQLDTAYSYYQRGDSEAAAAAAERFIKLHPAN 115 Query: 261 YWARYVETL 269 + Y L Sbjct: 116 PYVDYAWYL 124 >gi|124267193|ref|YP_001021197.1| putative transmembrane protein [Methylibium petroleiphilum PM1] gi|124259968|gb|ABM94962.1| putative transmembrane protein [Methylibium petroleiphilum PM1] Length = 274 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 16/242 (6%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 L+G + S ++YE+A N+ +A + + + A Sbjct: 26 GLIGCAGGPKDEFAGKST------DKLYEEARDEAANGNWERASKLYEKLEARTAGTQQA 79 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ---------- 143 +++ + A+ Y + QA S E +I +P S +DY YYL G+ Sbjct: 80 QQTQIDLAYAYYKTNEKAQALSTIERFIKLHPSSPAIDYAYYLQGLINFNENLGLLGGLA 139 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 DQ+A + Q ++ ++ NS Y A+ + N LA EV + RYY +R Sbjct: 140 RQDLSERDQQAARDAYQSFRQLTLQFPNSKYTPDAQLRMNYIVNTLATYEVHVARYYYRR 199 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 G YVAA R Q + + A EEA+ L +Y L L + + ++Q +P+ + Sbjct: 200 GAYVAAANRAQQAVQEFQRAPATEEALYILGISYDKLGLTELRDDAQRVLQTNFPESRYV 259 Query: 264 RY 265 + Sbjct: 260 KD 261 >gi|119470040|ref|ZP_01612845.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain [Alteromonadales bacterium TW-7] gi|119446750|gb|EAW28023.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain [Alteromonadales bacterium TW-7] Length = 254 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 110/249 (44%), Gaps = 12/249 (4%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 ++ K A I FS++V L ++ R + +YE A L +++A Sbjct: 4 KIGKRAFAIVFSVSVLSLGACSSAPDQEDIQRVP--NRSAQALYEDAKETLDSGLYARAI 61 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E + +PF +++ + + Y +G +QA + + +I P K++DY+YY+ Sbjct: 62 ELLSAIDSRYPFGPFSKQVQMDLVYAHYQSGNTEQALATIDRFIRLNPNHKDLDYMYYMR 121 Query: 138 GMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+ + I D T++ +S +V+R+ S Y A+ + N Sbjct: 122 GLVNIKADKNAFQEYFGIDRADRDANRTRVAFTDLSTLVKRFPQSGYAPEAKRRLVWLLN 181 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 ++A E+++ YY +R Y+AA R + V+ +YS + + A+ + ++Y L L + ++ Sbjct: 182 RMARYELKVATYYYEREAYLAAANRGKFVVEHYSQSSYLNAALDMMQKSYEKLGLTELSQ 241 Query: 248 EVVSLIQER 256 Sbjct: 242 NAKKAQALN 250 >gi|160872537|ref|ZP_02062669.1| competence lipoprotein ComL [Rickettsiella grylli] gi|159121336|gb|EDP46674.1| competence lipoprotein ComL [Rickettsiella grylli] Length = 250 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 13/252 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K + + L S+ + +VY+ A L + FS+A + Sbjct: 1 MKKINIVFLVGFIMALLSACASHSNN---PFIAFKGQTVSQVYQNARASLLDGEFSQAIK 57 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + + +PF + K+ L + Y G A + + +I YP S+ +DY YY+ Sbjct: 58 SYEALAVLYPFNRYSEKAQLGLIYAYYKDGDSPSAKTAAQRFIYLYPHSQYIDYAYYMRA 117 Query: 139 MSYAQMIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 M+ R D +L Q + ++ RY +SPYV AR + RN Sbjct: 118 MADMDQDRGWYLRYVPIDLALRDPGTMRLAYQEFAELIRRYPDSPYVPDARQRMIYLRNL 177 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 A E+ I YY +R Y+AA R ++ Y A + A+ +++AY L L AR+ Sbjct: 178 FARYELHIADYYFRRKAYIAAANRANEIIQQYQGAPEVKHALMIMIKAYRILGLETLARQ 237 Query: 249 VVSLIQERYPQG 260 +++ + YP Sbjct: 238 SLAIYRLNYPDS 249 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 25/67 (37%) Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 GE+ AI ++ + Y ++E+A L+ AY A+ YP + Sbjct: 50 GEFSQAIKSYEALAVLYPFNRYSEKAQLGLIYAYYKDGDSPSAKTAAQRFIYLYPHSQYI 109 Query: 264 RYVETLV 270 Y + Sbjct: 110 DYAYYMR 116 >gi|258545096|ref|ZP_05705330.1| competence lipoprotein ComL [Cardiobacterium hominis ATCC 15826] gi|258519673|gb|EEV88532.1| competence lipoprotein ComL [Cardiobacterium hominis ATCC 15826] Length = 287 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 10/218 (4%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T ++Y+ A + + + A +Y+ + +PF VA+++ L A+ Y G+ + Sbjct: 39 TVNWSAEKLYQTAKTEMNDGAYGSASKYYTKLLARYPFGRVAQQATLDLAYAYYRDGETE 98 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQY 161 +A S E +I YP+ +DY YY+ G+ + I D + K + Sbjct: 99 KAQSEIENFIRTYPQHPYIDYAYYMRGVFAYEKDVSIFDRLNPINMAQTDPQPLKQAFNH 158 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 +V R+ S Y + ARF + +N L E+EI YY+++G Y+AAI R + VL Y Sbjct: 159 FDELVRRFPQSEYAEDARFRMLFIKNLLGQHELEIADYYMRKGAYIAAINRAKGVLEQYE 218 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 A+A + AY L +++ ++Q + Sbjct: 219 QTPSTPYALALMTRAYRELGEQQLSQDSYRVLQMNFAD 256 Score = 42.0 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 33/88 (37%) Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 N A K + + + G Y +A + +LA Y A++A L AY Sbjct: 37 DETVNWSAEKLYQTAKTEMNDGAYGSASKYYTKLLARYPFGRVAQQATLDLAYAYYRDGE 96 Query: 243 MDEAREVVSLIQERYPQGYWARYVETLV 270 ++A+ + YPQ + Y + Sbjct: 97 TEKAQSEIENFIRTYPQHPYIDYAYYMR 124 >gi|218666506|ref|YP_002424926.1| competence lipoprotein ComL, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|218518719|gb|ACK79305.1| competence lipoprotein ComL, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 251 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 103/238 (43%), Gaps = 2/238 (0%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + + G + +S R +++ A + +++ A + F Sbjct: 5 ILMSLCCAALIAGCASTPNN--PDNSAVSHESARALFQPAKHAMDRGDYAAAIKLFEDLE 62 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +P+ A ++ L +A+ Y G + AA+ E +I +P + VDY +YL G++Y Q Sbjct: 63 TRYPYGPYAEQAQLDTAYSYYQRGDSEAAAAAAERFIKLHPANPYVDYAWYLKGIAYYQA 122 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 I+ + R + + + +R+ +S Y AR + N L + ++I ++Y R Sbjct: 123 IQGAQENPRPAEEAFSTLDTLAKRWPHSVYAADARLRMAKIINILGQRNLDICKFYYVRH 182 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 YVA+ R V+ Y + EEA+ L Y L L A+ V+++ YP + Sbjct: 183 AYVASANRCNTVITRYQLSTAREEALYYLTRDYRHLDLPQLAQTTVAVLAYNYPGSKY 240 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 27/69 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + RG+Y AAI F+ + Y +AE+A +Y + A + +P Sbjct: 46 MDRGDYAAAIKLFEDLETRYPYGPYAEQAQLDTAYSYYQRGDSEAAAAAAERFIKLHPAN 105 Query: 261 YWARYVETL 269 + Y L Sbjct: 106 PYVDYAWYL 114 >gi|126735392|ref|ZP_01751138.1| competence lipoprotein ComL, putative [Roseobacter sp. CCS2] gi|126715947|gb|EBA12812.1| competence lipoprotein ComL, putative [Roseobacter sp. CCS2] Length = 283 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 67/221 (30%), Positives = 118/221 (53%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++++E+ ++ N A F + R +P++ A+++L+M AF + Sbjct: 35 EPLDDLTAQQIFERGERQIERGNPDDAAFTFGEIERLYPYSEFAQRALIMQAFAYHRDED 94 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y + + + Y+ YP ++ Y YL+ +SY I +V DQ T LQ + ++E+Y Sbjct: 95 YPNSRASAQRYLDFYPAEEDAAYAAYLLALSYYDQIDEVGRDQGLTFQALQSLRLVIEQY 154 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 +S Y + + + LAAKE+EIGR+YLKRG Y+AA RF+ V+ ++ H EA Sbjct: 155 PDSEYASTSVLKFDLAFDHLAAKEMEIGRFYLKRGNYIAASNRFRTVVEDFQTTSHTPEA 214 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + RLVE+Y++L L++EA+ +++ Y W L+ Sbjct: 215 LHRLVESYLSLGLLEEAQTAGAILGYNYQSSEWYESSFALL 255 >gi|188575740|ref|YP_001912669.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520192|gb|ACD58137.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 277 Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 18/258 (6%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 + + F+V + ++D D ++Y KA +++ N++ A F +P Sbjct: 1 MLVMAFVVTGCHRGAKDKNPDEG---MPVEQLYGKAHNLMEKGNWAGAEASFKHLIAQYP 57 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI--- 145 + ++++ SA+ QY AGK+ S + +I YP +N+ Y+YYL G++ + Sbjct: 58 YGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNIAYLYYLRGLANSNRDTVF 117 Query: 146 -------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D + + + + +RY NS Y AR + R+ A E++ Sbjct: 118 LRHVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFAQHELDNAL 177 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YYL+R +V+A R +L Y + + +A+A L EAY L A + +++ P Sbjct: 178 YYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADARRVLELNDP 237 Query: 259 Q-----GYWARYVETLVK 271 + G W +Y + K Sbjct: 238 KHPWLTGNWPKYPLVIRK 255 >gi|148653371|ref|YP_001280464.1| DNA uptake lipoprotein-like protein [Psychrobacter sp. PRwf-1] gi|148572455|gb|ABQ94514.1| DNA uptake lipoprotein-like protein [Psychrobacter sp. PRwf-1] Length = 393 Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 13/251 (5%) Query: 21 KFALTIFFSIAVCFLVGWERQS--SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 K A + + + L G + + T + + Y++AV + + + A E Sbjct: 24 KLAFAV-LTAGLLSLTGCQTLKNITGKDSDTVATAEKTDAQYYQEAVKAMDKGRYIYASE 82 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + +P A ++LL + Q+ Y+ AA+ E++I YP + VDY YY+ G Sbjct: 83 QLTELRTFYPTGAYAEQALLDLMYSQFQTKDYELAATSAEQFIKLYPRNPQVDYAYYVRG 142 Query: 139 MSYA----------QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ ++ D +L ++ R+ NS Y A +T NQ Sbjct: 143 VANMHAGTSSLLSIARMQQADRDTSYYRLAFSNFQDLLSRFPNSSYAPDAAQRMTYIYNQ 202 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 A E+ R+Y+KR YVAA R + V Y ++ E++A L + L L D A + Sbjct: 203 FAESELSAARWYIKREAYVAAANRAKWVFQYYPLSQQIPESIAILAYSNEQLGLTDLANQ 262 Query: 249 VVSLIQERYPQ 259 +L+Q YP+ Sbjct: 263 YKTLLQINYPE 273 Score = 35.9 bits (82), Expect = 6.2, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 6/77 (7%) Query: 197 GRYY------LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 +YY + +G Y+ A + + Y +AE+A+ L+ + + A Sbjct: 62 AQYYQEAVKAMDKGRYIYASEQLTELRTFYPTGAYAEQALLDLMYSQFQTKDYELAATSA 121 Query: 251 SLIQERYPQGYWARYVE 267 + YP+ Y Sbjct: 122 EQFIKLYPRNPQVDYAY 138 >gi|71065815|ref|YP_264542.1| lipoprotein [Psychrobacter arcticus 273-4] gi|71038800|gb|AAZ19108.1| possible lipoprotein (DUF0169) [Psychrobacter arcticus 273-4] Length = 359 Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 114/253 (45%), Gaps = 13/253 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSS---RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 K + +++V LVG + + VT + ++ Y A+ + + +++ Sbjct: 8 FIKLSSITLLALSV-NLVGCQTFKNLTGGKDVDAVVTAEKSEQAYYNDAIAQIDKGRYTQ 66 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A E +P A ++LL + QY +GKY+ AA+ E++I YP + V Y YY Sbjct: 67 AVEDLTNLRTFYPTGQYAEQALLDMMYAQYESGKYETAAASAEQFIRLYPSNPQVSYAYY 126 Query: 136 LVGMSYAQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + G++ Q + D ++ ++ +Y NSPY A +T Sbjct: 127 VRGVANMQGSSEGLKLFKLNQAERDTAYYRIAFANFQELLNKYPNSPYASDAAQRMTFIY 186 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 NQ A E+ +Y++R YVAA+ R + V Y +E +A+ L ++ L L D A Sbjct: 187 NQFAESEMSAANWYIEREAYVAAVNRAKWVFQYYPLSESVPDAITVLAYSHEKLGLTDLA 246 Query: 247 REVVSLIQERYPQ 259 +E +L+Q YP Sbjct: 247 KEYKTLLQINYPN 259 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 22/65 (33%) Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 +G Y A+ + Y ++AE+A+ ++ A + A YP Sbjct: 61 KGRYTQAVEDLTNLRTFYPTGQYAEQALLDMMYAQYESGKYETAAASAEQFIRLYPSNPQ 120 Query: 263 ARYVE 267 Y Sbjct: 121 VSYAY 125 >gi|114771762|ref|ZP_01449155.1| competence lipoprotein ComL, putative [alpha proteobacterium HTCC2255] gi|114547578|gb|EAU50469.1| competence lipoprotein ComL, putative [alpha proteobacterium HTCC2255] Length = 230 Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 106/196 (54%) Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 +A F R +P++ A+KSLLMSA ++ Y+++ + E Y+ YP + + Sbjct: 4 EAASLFAAVERQYPYSEWAKKSLLMSAIANHNGAFYEESRADAERYLDFYPADVDAAHAQ 63 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 YL+ +SY I +V DQ T LQ ++ERY NS Y + + + LA E+ Sbjct: 64 YLIALSYYDQIDNVSRDQSVTFSALQAFRTVIERYPNSEYTSPSLLKFDLSLDHLAGAEM 123 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 E+GRYYLKRG + AAI RF++V+ + H EA+ RLVE+Y++L L+ A+ +++ Sbjct: 124 EVGRYYLKRGHFGAAISRFRVVVEEFETTSHTPEALHRLVESYLSLGLIANAQTTGAILG 183 Query: 255 ERYPQGYWARYVETLV 270 + W + L+ Sbjct: 184 HNFQASDWYKDTYVLL 199 >gi|45644679|gb|AAS73067.1| predicted secreted lipoprotein ComL [uncultured marine gamma proteobacterium EBAC20E09] Length = 273 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 54/242 (22%), Positives = 97/242 (40%), Gaps = 15/242 (6%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 IA ++ +S D + ++ YE+A + +NF A E + Sbjct: 11 ILIAPILMIAISSCNS-----DGPEIEQPEKIYYEQAQRRMAAKNFYGAIESLEAIENRY 65 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 PF A ++ + + + + + + S E++I +P N+DY Y++ G+S R+ Sbjct: 66 PFGKYAEQAQVELIYAHFMNSETEASHSAAEKFIRLHPRHPNIDYAYFMKGLSSYTRDRE 125 Query: 148 V----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 D K ++ + R+ +S Y A+ RN +A E+ Sbjct: 126 FLTRFTDTDLSNRDISGAKESFSELTEFLTRFPDSQYAPYAKQRNVYLRNMIAKNELAAA 185 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 YY+ YVAAI R V+ N ++ A+ L +Y AL + +V +I Y Sbjct: 186 DYYITIDAYVAAIRRANYVIENIPNSSENYRALKLLETSYDALGYSELLDDVRVVININY 245 Query: 258 PQ 259 P Sbjct: 246 PD 247 >gi|52841419|ref|YP_095218.1| competence lipoprotein ComL [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628530|gb|AAU27271.1| competence lipoprotein ComL [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 260 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 10/249 (4%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + F I + + + +D ++ +++Y A LK++ ++ A + Sbjct: 9 VLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAAKQLEAMES 68 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +PF+ S + + Y Y AA+ E +I YP +KNVDY YY+ G++ Q Sbjct: 69 MYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLANFQQT 128 Query: 146 RDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 R V D L + +++++ +S Y A + RN A E+ Sbjct: 129 RGVFAKMLPMDESWRDPGTQTQALVDFATLIQKFPDSKYKANALQRMIYLRNMFAQHELN 188 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + YY KR YVAAI R ++ NY A A++A+ + EA AL L A + +++ + Sbjct: 189 VSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAEDAMAVYKA 248 Query: 256 RYPQGYWAR 264 Y R Sbjct: 249 TYHTSNMIR 257 Score = 35.1 bits (80), Expect = 9.9, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 27/70 (38%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 LK+ EY A + + + + Y +++ E + +L+ AY A YP+ Sbjct: 51 LKKEEYATAAKQLEAMESMYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRA 110 Query: 261 YWARYVETLV 270 Y + Sbjct: 111 KNVDYAYYMR 120 >gi|303257042|ref|ZP_07343056.1| competence lipoprotein ComL [Burkholderiales bacterium 1_1_47] gi|302860533|gb|EFL83610.1| competence lipoprotein ComL [Burkholderiales bacterium 1_1_47] Length = 283 Score = 231 bits (591), Expect = 5e-59, Method: Composition-based stats. Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 10/229 (4%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 ++ T+ ++Y +A L E N+ A +Y+ + +P+ ++++ + +A+ + Sbjct: 34 VEDPTEGWTADKLYVEARDNLNEGNYETARDYYQKLEARYPYGRYSQQAQVETAYSYFKE 93 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVG----------MSYAQMIRDVPYDQRATKL 157 G+ QQA ++ + ++ QYPE Y Y+ G MSY D +A + Sbjct: 94 GEPQQAIAVCDRFLRQYPEHPLSPYALYIKGIATLDEDEGWMSYLTRQDLSKRDAQAARD 153 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 +V R+ NS Y + AR + A E+ +YY R Y+AAI R + VL Sbjct: 154 AFDIFKELVLRFPNSRYARDARERMHELVEAQAKYEINTAKYYYVRDAYIAAINRAENVL 213 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 N+ + AEEA+ + ++Y L + D+A ++ ++ +G + Y+ Sbjct: 214 LNFQTSPQAEEALIIMRDSYNKLGMDDKAADIQRILDANKNRGSYDTYL 262 >gi|264678274|ref|YP_003278181.1| transmembrane protein [Comamonas testosteroni CNB-2] gi|262208787|gb|ACY32885.1| putative transmembrane protein [Comamonas testosteroni CNB-2] Length = 271 Score = 231 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 63/250 (25%), Positives = 103/250 (41%), Gaps = 17/250 (6%) Query: 19 LYKFALTIFFS-IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + + +LT+ + + L G D T +Y +A + KA Sbjct: 9 MPRISLTLVPAVLIAATLAGCSSTK------DDPTAKWTPERIYTEARDESSSGAYDKAV 62 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 F + +A+++ L A+ QY AG+ QA + + + +P S +DY YL Sbjct: 63 PLFEKLEGRAAGTPLAQQAQLEKAYAQYKAGEKVQALATLDRFTKLHPASPAMDYALYLK 122 Query: 138 GMSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+ DQ+A K + +V R+ +S Y AR + N Sbjct: 123 GLVNFNDNLGMFGWLTRQDLSERDQKAAKDSFESFRELVTRFPDSKYSDDARQRMQYIVN 182 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 LA EV + +YY RG YVAAI R Q + +Y + EAM LV++Y AL + Sbjct: 183 SLAQYEVHVAKYYYSRGAYVAAIARAQAAIKDYQNVPAVREAMVILVKSYDALGMTQLRD 242 Query: 248 EVVSLIQERY 257 + +++ Y Sbjct: 243 DAQRVLESSY 252 >gi|170718792|ref|YP_001783974.1| hypothetical protein HSM_0636 [Haemophilus somnus 2336] gi|168826921|gb|ACA32292.1| Tetratricopeptide TPR_2 repeat protein [Haemophilus somnus 2336] Length = 262 Score = 231 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 20/255 (7%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 ++L AL F S+A L + + +YEK +L++ ++S+ Sbjct: 1 MHKLKSLALVAFASLA---LGACSSSG-------KAIEEGTAQTLYEKGHSYLQDADYSQ 50 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A Y + + FP + + L + Y + Y A + +I QYP+S ++DYV Y Sbjct: 51 AIRYLDTAKKRFPGSQYNEQVQLDLIYAYYKSQDYTNALVTIDRFIQQYPQSSHLDYVIY 110 Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G+S + + + + + K +V+ + NSPY A + Sbjct: 111 IAGLSNSALGDNWFQDLFGVDRATRESTSIKTAFANFQTLVQHFPNSPYASDALARMAYI 170 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 R LA E+EI ++Y KR +VA R +L Y D + +A+ + AY + L Sbjct: 171 RASLARHELEIAKFYAKRNAHVAVANRVVGMLQQYPDTKATLDALPLMKNAYEKMGLTKL 230 Query: 246 AREVVSLIQERYPQG 260 A++ SLIQ + Sbjct: 231 AQQADSLIQANQNKS 245 >gi|93005954|ref|YP_580391.1| putative lipoprotein (DUF0169) [Psychrobacter cryohalolentis K5] gi|92393632|gb|ABE74907.1| putative lipoprotein (DUF0169) [Psychrobacter cryohalolentis K5] Length = 359 Score = 231 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 67/253 (26%), Positives = 115/253 (45%), Gaps = 13/253 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSS---RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 K + +++V LVG + + VT + ++ Y A+ + + +++ Sbjct: 8 FIKLSSITLLALSV-NLVGCQTFKNLTGGKDVDAVVTAEKSEQAYYNDAIAQIDKGRYTQ 66 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A E +P A +SLL + QY++GKY+ AA+ E++I YP + V Y YY Sbjct: 67 AIEDLTNLRTFYPTGQYAEQSLLDMMYAQYASGKYETAAASAEQFIRLYPSNPQVSYAYY 126 Query: 136 LVGMSYAQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + G++ Q + D ++ ++ +Y NSPY A +T Sbjct: 127 VRGVANMQGSSEGLKLFKLNQAERDTAYYRIAFANFQELLNKYPNSPYAPDAAQRMTFIY 186 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 NQ A E+ +Y++R YVAA+ R + V Y +E +A+A L ++ L L D A Sbjct: 187 NQFAESEMSAANWYIEREAYVAAVNRAKWVFQYYPLSESVPDAIAVLAYSHEKLGLTDLA 246 Query: 247 REVVSLIQERYPQ 259 E +L+Q YP Sbjct: 247 NEYKTLLQINYPN 259 >gi|113460512|ref|YP_718576.1| DNA uptake lipoprotein [Haemophilus somnus 129PT] gi|112822555|gb|ABI24644.1| DNA uptake lipoprotein [Haemophilus somnus 129PT] Length = 262 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 20/255 (7%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 ++L AL F S+A L + + +YEK +L++ ++S+ Sbjct: 1 MHKLKSLALVAFASLA---LGACSSSG-------KAIEEGTAQTLYEKGHSYLQDADYSQ 50 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A Y + + FP + + L + Y + Y A + +I QYP+S ++DYV Y Sbjct: 51 AIRYLDTAKKRFPGSQYNEQVQLDLIYAYYKSQDYTNALVTIDRFIQQYPQSSHLDYVIY 110 Query: 136 LVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + G+S + + + + + K +V+ + NSPY A + Sbjct: 111 IAGLSNSALGDNWFQDLFGVDRATRESTSIKTAFANFQTLVQHFPNSPYAADALARMAYI 170 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 R LA E+EI ++Y KR +VA R +L Y D + +A+ + AY + L Sbjct: 171 RASLARHELEIAKFYAKRNAHVAVANRVVGMLQQYPDTKATLDALPLMKNAYEKMGLTKL 230 Query: 246 AREVVSLIQERYPQG 260 A++ SLIQ + Sbjct: 231 AQQADSLIQANQNKS 245 >gi|260912660|ref|ZP_05919146.1| DNA uptake lipoprotein [Pasteurella dagmatis ATCC 43325] gi|260633038|gb|EEX51203.1| DNA uptake lipoprotein [Pasteurella dagmatis ATCC 43325] Length = 291 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 106/250 (42%), Gaps = 17/250 (6%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y + K ++ + ++ + R + E+Y +L++ ++S++ Sbjct: 30 YPMRKLKSFTLIALTALAVTACSSSNNE-------VEQRPEEELYNAGQTYLQDGDYSQS 82 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 Y FP + + ++LL F Y Y + + ++ +YP+S ++DYV Y+ Sbjct: 83 IRYLEAVRNRFPGSSHSEQALLNLIFANYKTQDYTKTLVYADRFLQEYPQSSHLDYVLYM 142 Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 G++ + + + + + K +V+ + NSPY K A + + Sbjct: 143 AGLTNSALGDNYIQDLFGVDRATRENSSIKAAFANFQTLVQHFPNSPYAKDALARMVYIK 202 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 LA E+ I ++Y KR ++A R +L Y D + EA+ + +AY + L D A Sbjct: 203 ASLARHELSIAKFYAKRDAHIAVANRVVGMLQQYPDTQATHEALPLMQQAYEKMNLTDLA 262 Query: 247 REVVSLIQER 256 + +I+ Sbjct: 263 AQTAKIIEAN 272 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 30/73 (41%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 G+ YL+ G+Y +I + V + + H+E+A+ L+ A + Sbjct: 67 YNAGQTYLQDGDYSQSIRYLEAVRNRFPGSSHSEQALLNLIFANYKTQDYTKTLVYADRF 126 Query: 254 QERYPQGYWARYV 266 + YPQ YV Sbjct: 127 LQEYPQSSHLDYV 139 >gi|148358772|ref|YP_001249979.1| competence lipoprotein ComL [Legionella pneumophila str. Corby] gi|296106817|ref|YP_003618517.1| DNA uptake lipoprotein [Legionella pneumophila 2300/99 Alcoy] gi|148280545|gb|ABQ54633.1| competence lipoprotein ComL [Legionella pneumophila str. Corby] gi|295648718|gb|ADG24565.1| DNA uptake lipoprotein [Legionella pneumophila 2300/99 Alcoy] Length = 257 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 10/249 (4%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + F I + + + +D ++ +++Y A LK++ ++ A + Sbjct: 6 VLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAAKQLEAMES 65 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +PF+ S + + Y Y AA+ E +I YP +KNVDY YY+ G++ Q Sbjct: 66 MYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLANFQQT 125 Query: 146 RDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 R V D L + +++++ +S Y A + RN A E+ Sbjct: 126 RGVFAKMLPMDESWRDPGTQTQALVDFATLIQKFPDSKYKANALQRMIYLRNMFAQHELN 185 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + YY KR YVAAI R ++ NY A A++A+ + EA AL L A + +++ + Sbjct: 186 VSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAEDAMAVYKA 245 Query: 256 RYPQGYWAR 264 Y R Sbjct: 246 TYHTSNMIR 254 >gi|54294130|ref|YP_126545.1| hypothetical protein lpl1194 [Legionella pneumophila str. Lens] gi|54297143|ref|YP_123512.1| hypothetical protein lpp1188 [Legionella pneumophila str. Paris] gi|53750928|emb|CAH12339.1| hypothetical protein lpp1188 [Legionella pneumophila str. Paris] gi|53753962|emb|CAH15433.1| hypothetical protein lpl1194 [Legionella pneumophila str. Lens] gi|307609941|emb|CBW99469.1| hypothetical protein LPW_12421 [Legionella pneumophila 130b] Length = 257 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 10/249 (4%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + F I + + + +D ++ +++Y A LK++ ++ A + Sbjct: 6 VLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAAKQLEAMES 65 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +PF+ S + + Y Y AA+ E +I YP +KNVDY YY+ G++ Q Sbjct: 66 MYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLANFQQT 125 Query: 146 RDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 R V D L + +++++ +S Y A + RN A E+ Sbjct: 126 RGVFAKMLPMDESWRDPGTQTQALVDFATLIQKFPDSKYKANALQRMIYLRNMFAQHELN 185 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + YY KR YVAAI R ++ NY A A++A+ + EA AL L A + +++ + Sbjct: 186 VSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAEDAMAVYKA 245 Query: 256 RYPQGYWAR 264 Y R Sbjct: 246 TYHTSNMVR 254 >gi|270156941|ref|ZP_06185598.1| putative competence lipoprotein ComL [Legionella longbeachae D-4968] gi|289164633|ref|YP_003454771.1| competence lipoprotein comL precursor [Legionella longbeachae NSW150] gi|269988966|gb|EEZ95220.1| putative competence lipoprotein ComL [Legionella longbeachae D-4968] gi|288857806|emb|CBJ11652.1| putative competence lipoprotein comL precursor [Legionella longbeachae NSW150] Length = 257 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 104/256 (40%), Gaps = 10/256 (3%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K +F + L + +D +S ++Y + L ++ ++ A ++ Sbjct: 2 KRIQMLFLFALIVSLAACKSWWHKDEEDNSPYKGMTAEQLYTASQKDLHKKEYATAIKHL 61 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 +PF+ KS L + Y Y AA+ E +I YP ++NVDY YY+ GM+ Sbjct: 62 EAIETMYPFSDYTEKSQLDLIYAYYKNEDYPAAAATAERFIHLYPRARNVDYAYYMKGMA 121 Query: 141 YAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 Q R V D +V+++ +S Y A +T RN A Sbjct: 122 NFQQTRGVFAKFLPLDESWRDPGTQIQAYSDFGILVQKFPDSKYKANALQRMTYLRNMFA 181 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 E+ +Y KR YVAAI R V+ NY A ++A+ + E+ AL A E + Sbjct: 182 QHELNASTFYFKRKMYVAAIERANYVVKNYPQAPSVKQALVVMYESNKALGFNKAAEEAL 241 Query: 251 SLIQERYPQGYWARYV 266 S+ Y R V Sbjct: 242 SIYNATYHTNKMERIV 257 >gi|299533527|ref|ZP_07046904.1| putative transmembrane protein [Comamonas testosteroni S44] gi|298718485|gb|EFI59465.1| putative transmembrane protein [Comamonas testosteroni S44] Length = 263 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 63/250 (25%), Positives = 103/250 (41%), Gaps = 17/250 (6%) Query: 19 LYKFALTIFFS-IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + + +LT+ + + L G D T +Y +A + KA Sbjct: 1 MPRISLTLVPAVLIAATLAGCSSTK------DDPTAKWTPERIYTEARDESSSGAYDKAV 54 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 F + +A+++ L A+ QY AG+ QA + + + +P S +DY YL Sbjct: 55 PLFEKLEGRAAGTPLAQQAQLEKAYAQYKAGEKVQALATLDRFTKLHPASPAMDYALYLK 114 Query: 138 GMSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+ DQ+A K + +V R+ +S Y AR + N Sbjct: 115 GLVNFNDNLGMFGWLTRQDLSERDQKAAKDSFESFRELVTRFPDSKYSDDARQRMQYIVN 174 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 LA EV + +YY RG YVAAI R Q + +Y + EAM LV++Y AL + Sbjct: 175 SLAQYEVHVAKYYYSRGAYVAAIARAQAAIKDYQNVPAVREAMVILVKSYDALGMTQLRD 234 Query: 248 EVVSLIQERY 257 + +++ Y Sbjct: 235 DAQRVLESSY 244 >gi|311693417|gb|ADP96290.1| DNA uptake lipoprotein [marine bacterium HP15] Length = 291 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 53/223 (23%), Positives = 103/223 (46%), Gaps = 10/223 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + +V ++ YE A + NF++A + + +PF A ++ L + +Y Sbjct: 37 NKQEEVLPEKTYYENAREAMTSGNFNEAEQNLDALETYYPFGRYAEQAQLDLIYARYQNL 96 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLM 158 + + + + ++ P+S + DY Y+ G++ + I D Sbjct: 97 DLEGSRAAADRFLRLNPQSDHADYALYMRGLASYNLDIGLAARYFPIDVAARDPGEQLQS 156 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + S ++ RY +S YV AR + RN++A E+ RYY+KR YVAA R + ++ Sbjct: 157 FRDFSELLNRYPDSQYVADARQRMIAVRNRMAELELYAARYYVKRQAYVAANNRARYIIE 216 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 NY A EEA+ L E + L L +++ +++++ +P+ Sbjct: 217 NYPTATVTEEALIILAETFRFLELRKGSQDAIAMLRTNFPESD 259 >gi|332974184|gb|EGK11118.1| DNA uptake lipoprotein family protein [Psychrobacter sp. 1501(2011)] Length = 387 Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 13/253 (5%) Query: 20 YKFALTIFFSIAV-CFLVGWERQS--SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 K LT+ A L G + + T + + Y++AV + + + A Sbjct: 21 RKTKLTVALLTAGMLSLTGCQTLKNITGKDSDAVATAEKTDAQYYKEAVDAMDKGRYIYA 80 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 E ++ +P A ++LL + Q+ + +Y A + E++I YP + VDY YY+ Sbjct: 81 AEQLSELRTFYPTGAYAEQALLDLMYSQFQSNEYALAVTSAEQFIKLYPRNNQVDYAYYV 140 Query: 137 VGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 G++ Q ++ D +L ++ ++ NS Y A +T Sbjct: 141 RGVANMQAGTSSLLNITKLQQAHRDTSYYRLAFGNFQELLAKFPNSSYAPDAAQRMTYIY 200 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 NQ A E+ R+Y+KR YVAA R + V + ++ EA+A L L L D A Sbjct: 201 NQFAESELSAARWYIKREAYVAAANRAKWVFQYFPQSQQVPEAIAILAYTNEQLGLNDLA 260 Query: 247 REVVSLIQERYPQ 259 ++ +L+Q YP+ Sbjct: 261 QQYKTLLQINYPE 273 >gi|84516947|ref|ZP_01004305.1| competence lipoprotein ComL, putative [Loktanella vestfoldensis SKA53] gi|84509415|gb|EAQ05874.1| competence lipoprotein ComL, putative [Loktanella vestfoldensis SKA53] Length = 261 Score = 228 bits (581), Expect = 8e-58, Method: Composition-based stats. Identities = 72/237 (30%), Positives = 118/237 (49%), Gaps = 5/237 (2%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 LV S D ++++E ++ N A F + R + ++ A Sbjct: 2 LLVACSGAGSNVAMED-----LSAQQIFELGERQIEAGNADDAAFTFGEIERLYHYSEFA 56 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 +++L+M AF + G Y + + + ++ YP ++ Y YL+ +SY I D+ DQ Sbjct: 57 QRALIMQAFAYHRDGDYPNSRAAAQRFVDFYPAEQDAPYAAYLLALSYYDQISDIGRDQG 116 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 T LQ + R++E Y +S Y + + +QLAAKE+E+GRYYLKR Y AA RF Sbjct: 117 LTFEALQALRRVIETYPDSEYAAASVAKFDLAFDQLAAKEMEVGRYYLKRANYAAAANRF 176 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + V+ ++ H EA+ RLVEAY++L L DEA+ +++ Y W L+ Sbjct: 177 RTVVEDFQTTTHTPEALHRLVEAYLSLGLTDEAQTAGAILGYNYQSSDWYAASFALL 233 >gi|152997614|ref|YP_001342449.1| competence lipoprotein ComL [Marinomonas sp. MWYL1] gi|150838538|gb|ABR72514.1| competence lipoprotein ComL, putative [Marinomonas sp. MWYL1] Length = 280 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 114/254 (44%), Gaps = 20/254 (7%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 L +F+ + FS+ F+V + R+ L +R Y+KA LKE + A + Sbjct: 7 LLRFSGIVSFSL---FIVACSSKQVREPDLP-------ERVYYDKAQQALKENLPTTAIK 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + +PF + ++ L + Q A + A + E +I +PE +VDY YY+ Sbjct: 57 HLKDLDSRYPFGEFSTRAELDLIYAQMEASDFIAAHASAERFIKNHPEHDSVDYAYYMRA 116 Query: 139 MSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 +S + + D + ++ R+ S Y A+ + R Sbjct: 117 LSTYKGAESLMSRYLNLDPSERDSKELAKAFNELADFTSRFPESTYAPDAKARMYYLREM 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A E+++ RYYLKR ++A+ R Q V+ +Y EEA+A +++Y L D A+ Sbjct: 177 VARHELQVARYYLKRKAPLSALRRSQEVIQHYPSTRSVEEALAISIQSYNDLKQTDLAQT 236 Query: 249 VVSLIQERYPQGYW 262 ++++++ +P + Sbjct: 237 NLAVLKQNFPHTSY 250 >gi|254440813|ref|ZP_05054306.1| outer membrane assembly lipoprotein YfiO [Octadecabacter antarcticus 307] gi|198250891|gb|EDY75206.1| outer membrane assembly lipoprotein YfiO [Octadecabacter antarcticus 307] Length = 246 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 3/210 (1%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 I++ L G SR D ++++E+ L+ A +F + R +P Sbjct: 1 MISLGLLAGCNSFDSR---AAGALDTFSAQQIFERGEFELESGQADDAAFFFGEIERLYP 57 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 ++ A+++L+M AF + Y + + + YI YP ++ Y YL+ +SY I ++ Sbjct: 58 YSEWAKRALIMQAFSYHRDTDYPNSRAAAQRYIDFYPVDEDAAYAQYLLALSYYDQIDEI 117 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 DQ T LQ + ++ERY +S Y + + + + LAAKE+EIGRYYLKR + A Sbjct: 118 GRDQGLTFQALQALRVVIERYPDSEYAQSSVLKFDLAFDHLAAKEMEIGRYYLKRDHFAA 177 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 +I RF++V+ ++ H EA+ RLVE+Y+ Sbjct: 178 SINRFRIVVEDFQTTSHTPEALHRLVESYL 207 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 37/123 (30%), Gaps = 28/123 (22%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV---AA 209 + I Y S + K A Y + +Y AA Sbjct: 40 GQADDAAFFFGEIERLYPYSEWAKRALIMQAFS--------------YHRDTDYPNSRAA 85 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVAL--------ALMDEAREVVSLIQERYPQGY 261 R+ + Y E A A L +Y L +A + + ++ ERYP Sbjct: 86 AQRY---IDFYPVDEDAAYAQYLLALSYYDQIDEIGRDQGLTFQALQALRVVIERYPDSE 142 Query: 262 WAR 264 +A+ Sbjct: 143 YAQ 145 >gi|319778231|ref|YP_004129144.1| component of the lipoprotein assembly complex protein [Taylorella equigenitalis MCE9] gi|317108255|gb|ADU91001.1| component of the lipoprotein assembly complex protein [Taylorella equigenitalis MCE9] Length = 256 Score = 225 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 51/221 (23%), Positives = 104/221 (47%), Gaps = 10/221 (4%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T ++Y+ A +++ +++ A +Y P++ A+++++ A+V + + + Sbjct: 14 TAGLPADKLYDTARTYVRGRDWDSARKYLAAIENRHPYSSYAQQAMIDEAYVNWKDEQPE 73 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGM----------SYAQMIRDVPYDQRATKLMLQY 161 +A ++ + ++ YP +Y+ YL G+ + + D R + Sbjct: 74 RAIAVIDRFLQIYPSHPGTEYMLYLKGLITFTPPTHFLTSFAGQKPSERDPRGLRQSYTA 133 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 +++ Y NS Y AR + LA E + +YY ++ YVAAI R Q+VL +S Sbjct: 134 FKVLIDNYPNSRYAADARQRLVWLVTTLAEHEANVAKYYYEKKAYVAAINRAQVVLTEFS 193 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 AE A+ L+++Y AL D+A + S++ + YP + Sbjct: 194 GVPSAELALYVLMKSYEALGSEDQAADAKSVLVKNYPNSRY 234 >gi|330999931|ref|ZP_08323629.1| outer membrane assembly lipoprotein YfiO [Parasutterella excrementihominis YIT 11859] gi|329573338|gb|EGG54950.1| outer membrane assembly lipoprotein YfiO [Parasutterella excrementihominis YIT 11859] Length = 254 Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 10/229 (4%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 ++ T+ ++Y +A L E N+ A +Y+ + +P+ ++++ + +A+ + Sbjct: 5 VEDPTEGWTADKLYVEARDNLNEGNYETARDYYQKLEARYPYGRYSQQAQVETAYSYFKE 64 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVG----------MSYAQMIRDVPYDQRATKL 157 G+ QQA ++ + ++ QYPE Y Y+ G MSY D +A + Sbjct: 65 GEPQQAIAVCDRFLRQYPEHPLSPYALYIKGIATLDEDEGWMSYLTRQDLSKRDAQAARD 124 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 +V R+ NS Y + AR + A E+ +YY R Y+AAI R + VL Sbjct: 125 AFDIFKELVLRFPNSRYARDARERMHELVEAQAKYEINTAKYYYVRDAYIAAINRAENVL 184 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 N+ + AEEA+ + ++Y L + D+A ++ ++ +G + Y+ Sbjct: 185 LNFQTSPQAEEALIIMRDSYNKLGMDDKAADIQRILDANKNRGSYDTYL 233 >gi|126666671|ref|ZP_01737648.1| DNA uptake lipoprotein [Marinobacter sp. ELB17] gi|126628716|gb|EAZ99336.1| DNA uptake lipoprotein [Marinobacter sp. ELB17] Length = 265 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 10/219 (4%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 V ++ YE A + NF++A + +PF A ++ L F +Y + Sbjct: 14 EQVLPEQTYYENARSAMNSGNFNEAETNLDALETYYPFGRYAEQAQLDLIFARYQNLDLE 73 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQY 161 A + + ++ P+S++ DY ++ G++ + I + Sbjct: 74 GARAAADRFLRLNPQSEHGDYALFMRGLASYNLDIGLAARYFPIEANARAPGEQLQAFRD 133 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 S ++ RY +S Y AR + RN++A E+ RYY+ R Y+AA R + V+ NY Sbjct: 134 FSELLNRYPDSLYAADARQRMIAVRNRMAELELHAARYYITREAYIAANNRARYVVENYP 193 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + EEA+ L E + L + +++ ++L++ +P Sbjct: 194 SSPVVEEAIIILAETFRFLDIKKGSQDAIALLRTNFPDS 232 >gi|73667425|ref|YP_303441.1| hypothetical protein Ecaj_0812 [Ehrlichia canis str. Jake] gi|72394566|gb|AAZ68843.1| protein of unknown function UPF0169 [Ehrlichia canis str. Jake] Length = 254 Score = 224 bits (573), Expect = 7e-57, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 126/240 (52%), Gaps = 4/240 (1%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 TI F++G +++ R E+YE A+ +++ A + + Sbjct: 10 TICLLCCCIFMLGCSLVKKDIKFVEE----RTADEMYESALKKSGIKDYKSAVKDLEEID 65 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +PF+ VA K+ LM +F+ Y G Y +A ++YI YP+SK++D+ YYL M+ Sbjct: 66 NLYPFSPVAIKARLMMSFLNYELGDYSRAEIYADDYIQLYPDSKDIDFAYYLRIMANYMQ 125 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 I D+ DQ + +L+ + V + NS Y++ + + +AAKE IG++YL+RG Sbjct: 126 ISDIDRDQSSVNKVLELLDEFVRLFPNSIYLEEVMKRLDLVHQHIAAKEFSIGKFYLQRG 185 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 EYVAAI RF +L Y D ++ E++ R+ EAY+AL + + +SL++E W + Sbjct: 186 EYVAAIKRFSTILNKYEDTKYYSESLYRIAEAYLALGDVTAYAKYMSLLKECCINTGWYK 245 >gi|297180027|gb|ADI16252.1| DNA uptake lipoprotein [uncultured bacterium HF0010_16H03] Length = 245 Score = 224 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 56/249 (22%), Positives = 99/249 (39%), Gaps = 20/249 (8%) Query: 20 YKFALTIFF--SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 +K L FF SI F+VG D + ++ Y+ A ++ +N+ A Sbjct: 3 HKLNLKFFFCLSITALFMVGCNS--------DGPEIEQPEKIYYDLAQKRIQSKNYIAAI 54 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E +PF A ++ + + + G+ A + E++I +P N+DY Y + Sbjct: 55 ESLQAIETRYPFGRYAEQAQIELIYAYFMNGENLAAHAAAEKFIRLHPRHPNIDYAYLMK 114 Query: 138 GMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+S D K +S + R+ S Y A+ RN Sbjct: 115 GLSSYTRDTSFLVRVTDTDIANRDITGAKESFAELSEFLTRFPESQYSPYAKQRNIYLRN 174 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 +A E+ YY+ G Y+AA+ R + V+ N ++ A+ L E+Y L ++ Sbjct: 175 MIARNELSAADYYVSIGAYIAAVRRAKYVIENIPNSSENLRALVILKESYKNLGYLELYE 234 Query: 248 EVVSLIQER 256 +V +I Sbjct: 235 DVERIIDLN 243 >gi|254455886|ref|ZP_05069315.1| DNA uptake lipoprotein [Candidatus Pelagibacter sp. HTCC7211] gi|207082888|gb|EDZ60314.1| DNA uptake lipoprotein [Candidatus Pelagibacter sp. HTCC7211] Length = 283 Score = 224 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 78/251 (31%), Positives = 131/251 (52%), Gaps = 2/251 (0%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + KF L I A+ +++ ++ + + E Y++ + L+ + A + Sbjct: 1 MNKFFLFIILFAALISCA--KKEEFKESIIKEKSLDLQVLEAYQEGMKNLESGDVIYAAK 58 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 FN+ FP + A KS LM+A+ Y+ Y + E ++ YP SKN+DYVYYL+G Sbjct: 59 KFNEAEILFPQSDWAPKSALMAAYSYYTQDYYADTIAELERFLRVYPLSKNLDYVYYLLG 118 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY + I D D ++ +Y +++ Y N+ Y A F + + + LAAKE+ IGR Sbjct: 119 VSYYEQIVDEKKDLQSIIKAKKYFEILIQNYPNTNYSLDAEFKIELVNDTLAAKEMYIGR 178 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YY + +++ AI RF+ V+ NY +AEEA+ RLVE + L L DEA++ +L+ Y Sbjct: 179 YYFDKKKWIPAINRFKTVIDNYDTTLYAEEALHRLVEVHYILGLKDEAKKYANLLGYNYQ 238 Query: 259 QGYWARYVETL 269 W ++ Sbjct: 239 SSIWYEKTYSI 249 >gi|146329582|ref|YP_001210176.1| competence protein ComL [Dichelobacter nodosus VCS1703A] gi|146233052|gb|ABQ14030.1| competence protein ComL [Dichelobacter nodosus VCS1703A] Length = 278 Score = 224 bits (572), Expect = 8e-57, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 109/245 (44%), Gaps = 16/245 (6%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + V FL G T ++Y+ ++ +++ A +YF + Sbjct: 8 VAIIAMVVFLAGCSG------MQLDHTANWNAHQLYQAGKTEMESSSYTTAIDYFTKLLA 61 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM------ 139 +P+ +A++S+L A+ Y AG+ ++A + + + YP+ +DY Y+ G+ Sbjct: 62 RYPYGVLAQQSMLDIAYSYYRAGEAEKALAQLDSFSKTYPQHPYIDYALYMKGVVEYEKN 121 Query: 140 -SYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 S+ + + D K +++VER+ S Y + AR+ + N L ++E Sbjct: 122 ISFFKRLLPTDLSQTDPTPLKNAFDLFAQLVERFPQSEYAEDARYRMIFLHNLLGKHDLE 181 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 I +YL++G++VAA R + +L +Y A A+A ++ AY L A + + + Sbjct: 182 IADFYLRKGDFVAAAARAKNILEHYETTPSAPYALAIMIRAYRELGQKLLADDAMRVFNM 241 Query: 256 RYPQG 260 Y Sbjct: 242 NYVDS 246 >gi|171059557|ref|YP_001791906.1| putative transmembrane protein [Leptothrix cholodnii SP-6] gi|170777002|gb|ACB35141.1| putative transmembrane protein [Leptothrix cholodnii SP-6] Length = 284 Score = 224 bits (572), Expect = 9e-57, Method: Composition-based stats. Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 14/258 (5%) Query: 19 LYKFA----LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74 ++KF L + + AV ++ ++ + + ++YE+A Sbjct: 16 MFKFVQPQGLRVLTATAVVAVLLAGSLGGCAADPKALPEHQNVGKLYEEAREEAAAGASD 75 Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 +A + + + +A+++ L AF+ Y + Q+ ++ E ++ +P S DY Y Sbjct: 76 RAIKLYERLEGLAAGTLLAQQAQLERAFLHYKMQEKAQSLAIIERFLKLHPTSPAADYAY 135 Query: 135 YLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 YL G+ + DQ+A++ Q ++V+RY +S Y AR + Sbjct: 136 YLQGLINFNDDLGLFGSIVKTDLAERDQQASRDAYQSFKQLVDRYPDSRYAPDARLRINY 195 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 N LAA EV + RYY +RG YVA+ R Q + ++ AEEA+ + +Y L + Sbjct: 196 IINALAAHEVHVARYYYQRGAYVASANRAQQAVQDFRGVPAAEEALYLMAASYHQLGMAP 255 Query: 245 EAREVVSLIQERYPQGYW 262 + ++Q YP+ W Sbjct: 256 LRDDAWRVLQNNYPKSRW 273 >gi|88857988|ref|ZP_01132630.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain [Pseudoalteromonas tunicata D2] gi|88819605|gb|EAR29418.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain [Pseudoalteromonas tunicata D2] Length = 233 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 99/233 (42%), Gaps = 12/233 (5%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 L + ++ + + +Y+ A L + +A E + +PF ++ Sbjct: 1 MLSACSSKPEQEQIERVP--NKSAQALYDDAKQTLDSGLYIRAIELLSAIDSRYPFGPMS 58 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--------- 144 ++ + + Y + ++ + + +I P K++DY+YY+ G++ + Sbjct: 59 KQVQMDLVYAHYQSNNTDKSIATIDRFIRLNPNHKDLDYMYYMRGLNNIKADENAFQEYF 118 Query: 145 -IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 + D T+ + + ++++Y S Y A+ N++A EV++ YY R Sbjct: 119 GVDRADRDPIKTREAYKDLDTLIKKYPTSSYADEAKKRQVWLLNKMARYEVKVANYYYDR 178 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 Y+AA R + V+ ++ + + +EA+ +V +Y L L D ++Q Sbjct: 179 QAYLAAANRGKYVVEHFGQSSYVKEALEIMVNSYDKLGLSDLRDHSEQILQAN 231 >gi|262276887|ref|ZP_06054680.1| outer membrane assembly lipoprotein YfiO [alpha proteobacterium HIMB114] gi|262223990|gb|EEY74449.1| outer membrane assembly lipoprotein YfiO [alpha proteobacterium HIMB114] Length = 277 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 59/253 (23%), Positives = 127/253 (50%), Gaps = 3/253 (1%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 ++K + F V L+G ++++ + + +Y A ++ N++++ E Sbjct: 1 MFKKYHELIFIFLVLVLLGCSKKAN---LVKKPETIPPLNILYTNAYKEFEKGNWTESVE 57 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F + + ++ A ++ LM ++ Y + Q E++ Y + + YV ++ Sbjct: 58 LFQKVETRYSYSEWAPRATLMILYIHYDSNDSIQTLRYVEKFKKLYSGREEISYVDFIRA 117 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 M++ + I V DQ T++ L+ I+++Y NS Y K ++ + + QLA KE+ + R Sbjct: 118 MTFYEQINVVSKDQTYTEVALKEFREIIKKYPNSIYAKESKLKIDLILEQLAGKEMYLAR 177 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YY+ + ++++A+ R +VL+ Y ++ EA+ RLVE Y L ++EA++ +L+ + Sbjct: 178 YYMNKNKWISALKRLNIVLSKYETTIYSTEALHRLVEIYYRLGNVNEAKKYAALLGYNFN 237 Query: 259 QGYWARYVETLVK 271 W + +VK Sbjct: 238 DSDWYKKTYRIVK 250 >gi|148827315|ref|YP_001292068.1| hypothetical protein CGSHiGG_03480 [Haemophilus influenzae PittGG] gi|148718557|gb|ABQ99684.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittGG] Length = 262 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 56/231 (24%), Positives = 97/231 (41%), Gaps = 17/231 (7%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G S+DV SV E+Y K L+E ++S+A Y + FP + + Sbjct: 17 IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSIYQEQ 69 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------I 145 ++L + Y Y Q + ++ Q+P+S N Y Y+ G++ A I Sbjct: 70 AMLDLIYANYKTQDYTQVLLTVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNVIQDFFGI 129 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 + + + +V + NSPY + A + ++ LA E+EI ++Y KR Sbjct: 130 DRATRETTSMRTAFSNFQNLVRAFPNSPYSQDALARMAYIKDALARHELEIAKFYTKRKA 189 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +VA R +L Y D + E + + EAY + L A + +I Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240 >gi|319942385|ref|ZP_08016699.1| hypothetical protein HMPREF9464_01918 [Sutterella wadsworthensis 3_1_45B] gi|319804073|gb|EFW00981.1| hypothetical protein HMPREF9464_01918 [Sutterella wadsworthensis 3_1_45B] Length = 262 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 55/244 (22%), Positives = 104/244 (42%), Gaps = 18/244 (7%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 L++ + A C W + +D LD ++Y +A + L + N+++A +Y+ + Sbjct: 17 LLSVTLATASC---SWLQSLDKDQTLD-----WSAEKLYSEARVALDDSNWTQAKDYYQK 68 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +PF A+++ + + + G A + ++ YP N DYV YL ++ Sbjct: 69 LEARYPFGQYAQQAQIELIYATWKDGDAPGAVQAADRFLQTYPNHANADYVMYLKALATL 128 Query: 143 QMIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 D A++ +V RY +S + AR + A Sbjct: 129 NETDSWFNKLAGEDLAERDANASREAFDIFKELVMRYPDSRFTPEARRRMHGLVLAQAEH 188 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E++ RYY R YVAAI R Q V+ + + ++A+ + ++Y AL L + A + + Sbjct: 189 ELKTARYYFVRNAYVAAIERAQRVVREFQNTPMRDDALELIAQSYEALKLTELAADTRRI 248 Query: 253 IQER 256 I+ Sbjct: 249 IELN 252 >gi|145628475|ref|ZP_01784275.1| conserved hypothetical lipoprotein [Haemophilus influenzae 22.1-21] gi|145639767|ref|ZP_01795369.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae PittII] gi|144978945|gb|EDJ88631.1| conserved hypothetical lipoprotein [Haemophilus influenzae 22.1-21] gi|145271135|gb|EDK11050.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae PittII] gi|309750407|gb|ADO80391.1| Probable outer membrane protein assembly complex subunit BamD [Haemophilus influenzae R2866] Length = 262 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 17/231 (7%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G S+DV SV E+Y K L+E ++S+A Y + FP + + Sbjct: 17 IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQ 69 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYD 151 ++L + Y Y Q + + ++ Q+P+S N Y Y+ G++ A I+D Sbjct: 70 AMLDLIYANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129 Query: 152 QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 RAT+ +V + NSPY + A + ++ LA E+EI ++Y KR Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKA 189 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +VA R +L Y D + E + + EAY + L A + +I Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240 >gi|223042000|ref|ZP_03612183.1| putative lipoprotein [Actinobacillus minor 202] gi|240949470|ref|ZP_04753810.1| putative lipoprotein [Actinobacillus minor NM305] gi|223017198|gb|EEF15627.1| putative lipoprotein [Actinobacillus minor 202] gi|240296043|gb|EER46704.1| putative lipoprotein [Actinobacillus minor NM305] Length = 260 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 121/264 (45%), Gaps = 21/264 (7%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + KF +A +VG +++++ + +++Y K +L++ +++ A Sbjct: 1 MRKFTSLASLILAGLLVVGCSSNANKEL------EEASAQDLYSKGQTYLQDGDYNSAIR 54 Query: 79 YFNQCSRDF-PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 Y + + ++ L + QY G+Y +A + E ++ YP S +DYV+YL Sbjct: 55 YLDAVGTKGGQQSQFGEQTQLSLIYAQYKIGEYYKALDIAERFVRAYPNSPQMDYVFYLA 114 Query: 138 GMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 +S A++ + + + IV+ + NS YV A+ ++ +N Sbjct: 115 ALSNARLGDNFIQDFFGVNRSSRSTDSVRNAYGSFQTIVKEFPNSKYVPEAQQWMVYLKN 174 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 +LA E++I ++Y +R YVA R + ++ Y D++ EA+ + +A+ + L D A Sbjct: 175 RLAEHELQIVKFYDEREAYVAVANRVEEMMNFYPDSKPTLEALPYMQKAFEKMGLNDSAE 234 Query: 248 EVVSLIQER----YPQGYWARYVE 267 +V S+I+ +P Y E Sbjct: 235 KVASIIEANKNKEFPTITKPEYSE 258 >gi|329123817|ref|ZP_08252375.1| NrfG protein [Haemophilus aegyptius ATCC 11116] gi|327469304|gb|EGF14775.1| NrfG protein [Haemophilus aegyptius ATCC 11116] Length = 272 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 17/231 (7%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G S+DV SV E+Y K L+E ++S+A Y + FP + + Sbjct: 27 IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSIYQEQ 79 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYD 151 ++L + Y A Y Q + + ++ Q+P+S N Y Y+ G++ A I+D Sbjct: 80 AMLDLIYANYKAQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 139 Query: 152 QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 RAT+ +V + NSPY + A + ++ LA E+EI ++Y KR Sbjct: 140 DRATRETTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKA 199 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +VA R +L Y D + E + + EAY + L A + +I Sbjct: 200 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 250 >gi|297170430|gb|ADI21462.1| DNA uptake lipoprotein [uncultured gamma proteobacterium HF0070_10G19] Length = 263 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 51/242 (21%), Positives = 99/242 (40%), Gaps = 18/242 (7%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 I F I++ +G + +++ YE A + +N+ A + Sbjct: 11 LIIFLISLIVSIGCSSNKE--------VIEQPEQQYYELAQRRMNAKNYFAAIQSLEMIE 62 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +PF A ++ + Y G + A S E++I +P N+DY Y++ G++ Sbjct: 63 TRYPFGRFAEQAQAELIYANYMMGDDEAAHSAAEKFIRLHPRHPNIDYAYFMRGLASYTR 122 Query: 145 IRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 D K +S + R++ S Y A + RN +A E+ Sbjct: 123 DNSFFARVFKNSLARRDISGAKQSFNELSEFLTRFSQSQYAPYANQRLIFLRNIIAKHEL 182 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 YY+KR Y+A++ R + V+ N ++ +A+ + ++Y+ L +D A EV ++ Sbjct: 183 AAAEYYVKREAYIASLRRAKYVIENIPNSSENLKALEIMKKSYLELGYLDLAEEVEETMR 242 Query: 255 ER 256 Sbjct: 243 IN 244 >gi|145633598|ref|ZP_01789326.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae 3655] gi|145637337|ref|ZP_01792997.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittHH] gi|148825562|ref|YP_001290315.1| hypothetical protein CGSHiEE_02415 [Haemophilus influenzae PittEE] gi|229845162|ref|ZP_04465296.1| conserved hypothetical lipoprotein [Haemophilus influenzae 6P18H1] gi|229847287|ref|ZP_04467390.1| conserved hypothetical lipoprotein [Haemophilus influenzae 7P49H1] gi|144985804|gb|EDJ92418.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae 3655] gi|145269429|gb|EDK09372.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittHH] gi|148715722|gb|ABQ97932.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittEE] gi|229809830|gb|EEP45553.1| conserved hypothetical lipoprotein [Haemophilus influenzae 7P49H1] gi|229811873|gb|EEP47568.1| conserved hypothetical lipoprotein [Haemophilus influenzae 6P18H1] gi|309972702|gb|ADO95903.1| Probable outer membrane protein assembly complex subunit BamD [Haemophilus influenzae R2846] Length = 262 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 17/231 (7%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G S+DV SV E+Y K L+E ++S+A Y + FP + + Sbjct: 17 IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQ 69 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYD 151 ++L + Y Y Q + + ++ Q+P+S N Y Y+ G++ A I+D Sbjct: 70 AMLDLIYANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129 Query: 152 QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 RAT+ +V + NSPY + A + ++ LA E+EI ++Y KR Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKA 189 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +VA R +L Y D + E + + EAY + L A + +I Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240 >gi|68248782|ref|YP_247894.1| hypothetical protein NTHI0266 [Haemophilus influenzae 86-028NP] gi|68056981|gb|AAX87234.1| conserved hypothetical lipoprotein [Haemophilus influenzae 86-028NP] Length = 262 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 17/231 (7%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G S+DV SV E+Y K L+E ++S+A Y + FP + + Sbjct: 17 IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQ 69 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYD 151 ++L + Y Y Q + + ++ Q+P+S N Y Y+ G++ A I+D Sbjct: 70 AMLDLIYANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129 Query: 152 QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 RAT+ +V + NSPY + A + ++ LA E+EI ++Y KR Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYAQDALARMAYIKDALARHELEIAKFYAKRKA 189 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +VA R +L Y D + E + + EAY + L A + +I Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240 >gi|260582392|ref|ZP_05850184.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae NT127] gi|260094543|gb|EEW78439.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae NT127] gi|301168828|emb|CBW28419.1| predicted lipoprotein [Haemophilus influenzae 10810] Length = 262 Score = 221 bits (565), Expect = 6e-56, Method: Composition-based stats. Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 17/231 (7%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G S+DV SV E+Y K L+E ++S+A Y + FP + + Sbjct: 17 IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQ 69 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYD 151 ++L + Y Y Q + + ++ Q+P+S N Y Y+ G++ A I+D Sbjct: 70 AMLDLIYANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129 Query: 152 QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 RAT+ +V + NSPY + A + ++ LA E+EI ++Y KR Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKA 189 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +VA R +L Y D + E + + EAY + L A + +I Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240 >gi|88657674|ref|YP_507792.1| putative competence protein ComL [Ehrlichia chaffeensis str. Arkansas] gi|88599131|gb|ABD44600.1| putative competence protein ComL [Ehrlichia chaffeensis str. Arkansas] Length = 250 Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats. Identities = 76/251 (30%), Positives = 129/251 (51%), Gaps = 5/251 (1%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K + + CFL+ + + + R E+YE A+ + + A + Sbjct: 5 KIIRKAVYLLCCCFLMVNCSFIKK---GEKFVEDRTADEMYESALKKSNAKEYKSAVKDL 61 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + +PF+ VA K+ LM +F+ Y G Y +A ++YI YP+SK++D+ YYL M+ Sbjct: 62 EEIDNLYPFSPVAIKARLMMSFLNYELGDYSRAEIYADDYIQLYPDSKDIDFAYYLRIMA 121 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 I D+ DQ + +L+ ++ + + NS Y++ + + +A KE IG++Y Sbjct: 122 NYMQISDIDRDQSSVHKVLELLNEFIRLFPNSMYLEEVMKRLELVHQHIAGKEFSIGKFY 181 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L+RGEYVAAI RF +L Y D ++ E++ R+ EAY+AL + +SL++E Sbjct: 182 LQRGEYVAAIKRFSTILNKYKDTKYYSESLYRIAEAYLALGDIAAYARYMSLLKECCIDT 241 Query: 261 YWARYVETLVK 271 W + E LVK Sbjct: 242 GWYK--EPLVK 250 >gi|87119408|ref|ZP_01075305.1| competence lipoprotein ComL, putative [Marinomonas sp. MED121] gi|86164884|gb|EAQ66152.1| competence lipoprotein ComL, putative [Marinomonas sp. MED121] Length = 280 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 105/253 (41%), Gaps = 16/253 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 L K L + + + L+G + + E Y+ A + A + Sbjct: 3 LRKSLLQLSGFVGISLLLGACSNA------PVQEPDLPESEYYQNAQEAFDQGRPLVAVQ 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + + A Y A + E +I +YPE + +DYVYY Sbjct: 57 NLKDLDSRYPFGEFTQRAELEIIYAYFLASDYISAHANAERFIKKYPEFETIDYVYYYRA 116 Query: 139 MSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 +S + D + + +++R+ S Y A+ + RN Sbjct: 117 LSTFKGGETLSTRYLNQDPSQRDSSEFIKAFREFADLLKRFPESSYASDAKARMIYLRNT 176 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A E+++ +YY KR +AA+ R Q VL Y ++ E+A+A ++AY+ L + A + Sbjct: 177 IARHELQVAKYYFKRNAPLAALHRSQTVLNKYPSSDSVEDALAINIQAYIELEQFELADQ 236 Query: 249 VVSLIQERYPQGY 261 ++++ YP Sbjct: 237 NLAILTNNYPASK 249 >gi|145631296|ref|ZP_01787068.1| conserved hypothetical lipoprotein [Haemophilus influenzae R3021] gi|144983081|gb|EDJ90581.1| conserved hypothetical lipoprotein [Haemophilus influenzae R3021] Length = 262 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 17/231 (7%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G S+DV SV E+Y K L+E ++S+A Y + FP + + Sbjct: 17 IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQ 69 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYD 151 ++L + Y Y Q + + ++ Q+P+S N Y Y+ G++ A I+D Sbjct: 70 AMLDLIYANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129 Query: 152 QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 RAT+ +V + NSPY + A + ++ LA E+EI ++Y KR Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKA 189 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +VA R +L Y D + E + + EAY + L A + +I Sbjct: 190 WVAVANRVVGMLQQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240 >gi|319775953|ref|YP_004138441.1| lipoprotein [Haemophilus influenzae F3047] gi|319898142|ref|YP_004136339.1| lipoprotein [Haemophilus influenzae F3031] gi|317433648|emb|CBY82033.1| predicted lipoprotein [Haemophilus influenzae F3031] gi|317450544|emb|CBY86761.1| predicted lipoprotein [Haemophilus influenzae F3047] Length = 262 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 17/231 (7%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G S+DV SV E+Y K L+E ++S+A Y + FP + + Sbjct: 17 IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSIYQEQ 69 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYD 151 ++L + Y A Y Q + + ++ Q+P+S N Y Y+ G++ A I+D Sbjct: 70 AMLDLIYANYKAQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129 Query: 152 QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 RAT+ +V + NSPY + A + ++ LA E+EI ++Y KR Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKA 189 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +VA R +L Y D + E + + EAY + L A + +I Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240 >gi|301154794|emb|CBW14257.1| predicted lipoprotein [Haemophilus parainfluenzae T3T1] Length = 263 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 55/248 (22%), Positives = 100/248 (40%), Gaps = 17/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K + ++ + + + E+Y K L+E ++S + Sbjct: 1 MRKIKSLVLIALTSFAIAACSSGNKE-------VEQASVDELYAKGAAALQEGSYSDSIR 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 Y + FP + +++L + Y Y + ++ Q+P+S N DY Y+ G Sbjct: 54 YLKAATERFPGSTYQEQAMLDLIYANYKTQDYTATLVTVDNFLQQFPQSPNRDYAVYMAG 113 Query: 139 MSYA----QMIRDVPYDQRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ MI+D RAT+ +V + NSPY + A + ++ Sbjct: 114 LTNLATADNMIQDFFGIDRATRETTSMKTAFSNFQSLVRAFPNSPYSQDAVARMAYIKDS 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E+EI ++Y KR +VA R +L Y DA+ E + + EAY + L A + Sbjct: 174 LARHELEIAKFYAKRDAWVAVSNRVVGMLQQYPDAKATYEGLFLMKEAYEKMGLQQLANQ 233 Query: 249 VVSLIQER 256 +I Sbjct: 234 TQQVIDAN 241 >gi|145635281|ref|ZP_01790984.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittAA] gi|145267425|gb|EDK07426.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittAA] Length = 262 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 17/231 (7%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G S+DV SV E+Y K L+E ++S+A Y + FP + + Sbjct: 17 IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPSSVYQEQ 69 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYD 151 ++L + Y Y Q + + ++ Q+P+S N Y Y+ G++ A I+D Sbjct: 70 AMLDLIYANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129 Query: 152 QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 RAT+ +V + NSPY + A + ++ LA E+EI ++Y KR Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYAQDALARMAYIKDALARHELEIAKFYAKRKA 189 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +VA R +L Y D + E + + EAY + L A + +I Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240 >gi|118594977|ref|ZP_01552324.1| putative competence lipoprotein precursor [Methylophilales bacterium HTCC2181] gi|118440755|gb|EAV47382.1| putative competence lipoprotein precursor [Methylophilales bacterium HTCC2181] Length = 272 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 111/242 (45%), Gaps = 16/242 (6%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 CF+ G + T R E+ A +F +++ + E+ + + FP + Sbjct: 20 GCFIFGEPTEFDE-------TMGRTDAEIVRGAEVFSANKDWQRTIEWLEKAEKRFPNSP 72 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--------- 142 +A + L A+ + + ++A ++ +++I YP +DY YYL G+ Sbjct: 73 LAPQIKLNLAYAYKNFYRDEEALAMLDKFIRTYPNHPALDYAYYLKGVVLFVDRGIVEEL 132 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + D + + + ++V + S Y + A +T N+++ +E+ + RYY++ Sbjct: 133 TLQDISDRDVSQLEGAFKALKQMVRLFPESEYAEDATNRMTYLMNKISERELHVARYYMR 192 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 R YV A+ R + VL NYS + H EEA+ +V AY L + D A + ++ +P + Sbjct: 193 REAYVGALNRAKFVLENYSQSIHQEEALVIMVSAYNKLGIFDLAEDTKRVLDLNFPDTQF 252 Query: 263 AR 264 + Sbjct: 253 RK 254 >gi|326796214|ref|YP_004314034.1| outer membrane assembly lipoprotein YfiO [Marinomonas mediterranea MMB-1] gi|326546978|gb|ADZ92198.1| outer membrane assembly lipoprotein YfiO [Marinomonas mediterranea MMB-1] Length = 280 Score = 219 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 107/240 (44%), Gaps = 17/240 (7%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 L Q+ R+ L ++E Y+KA L + A ++ + +PF Sbjct: 18 SILSACSNQTVREPDLP-------EQEYYDKAQEALDNGLPATAVKHLKDLTARYPFGDF 70 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ--------- 143 + ++ L + QY +G Y + + E +I + +S +DY YY+ G+S + Sbjct: 71 STRAELDLIYAQYESGDYIASHATAERFIRNHLDSDALDYAYYMRGLSTYKGAETFLGRY 130 Query: 144 -MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + D + + + R+ SPY A+ + RN +A E+++ YY K Sbjct: 131 LDLNPAERDAHEFEKAFGEFADFLARFPKSPYAVDAKARMIYLRNTVADHELQVAHYYFK 190 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 R ++A+ R Q V+ +Y + EEA+A ++AY+ + + A+ + ++ + YP + Sbjct: 191 RHAPISALRRAQEVIQHYPSSNSVEEAIAVTIQAYLNMEQYELAKTNLGVLTKNYPNSKY 250 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 37/122 (30%), Gaps = 22/122 (18%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV--------------QYSAGKYQQAA 114 F KA+ F FP + A + ++ + A Sbjct: 139 DAHEFEKAFGEFADFLARFPKSPYAVDAKARMIYLRNTVADHELQVAHYYFKRHAPISAL 198 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 +E I YP S +V+ + +Y M +L + + + Y NS Y Sbjct: 199 RRAQEVIQHYPSSNSVEEAIAVTIQAYLNM--------EQYELAKTNLGVLTKNYPNSKY 250 Query: 175 VK 176 + Sbjct: 251 ID 252 >gi|167855785|ref|ZP_02478538.1| putative lipoprotein [Haemophilus parasuis 29755] gi|219871127|ref|YP_002475502.1| DNA uptake lipoprotein, TPR repeat-containing protein [Haemophilus parasuis SH0165] gi|167853064|gb|EDS24325.1| putative lipoprotein [Haemophilus parasuis 29755] gi|219691331|gb|ACL32554.1| DNA uptake lipoprotein, TPR repeat-containing protein [Haemophilus parasuis SH0165] Length = 259 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 110/248 (44%), Gaps = 16/248 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + KF +A +VG + + +E+Y+K +L++ +++ A Sbjct: 1 MRKFYSLASLVLAGLLVVGCSGSKKDEF------EGIPSQELYDKGQAYLQDGDYNNAIR 54 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 Y + + L + Y G+Y +A + E + +P S ++DYVYYL G Sbjct: 55 YLDAVDLRSNQGAYDEQVQLSLIYANYKLGEYYKALEVAERFARTHPNSSSMDYVYYLAG 114 Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++YA++ I + I +Y NS Y A+ ++ +N+ Sbjct: 115 LNYARLGDNWIQDFFGINRASRAIENIRNAYGNFQTITFQYPNSQYTSDAQNWMIYLKNR 174 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E++I +Y++R YVA + R +L Y D + +A+ L ++ A+ + D A++ Sbjct: 175 LAEHELKIAEFYMERKAYVAVVNRVDEMLRLYPDTQATYQALPLLKTSFEAMGIKDSAQK 234 Query: 249 VVSLIQER 256 + +I+E Sbjct: 235 ISEMIKEN 242 >gi|332290083|ref|YP_004420935.1| outer membrane protein assembly complex subunit YfiO [Gallibacterium anatis UMN179] gi|330432979|gb|AEC18038.1| outer membrane protein assembly complex subunit YfiO [Gallibacterium anatis UMN179] Length = 267 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 64/257 (24%), Positives = 117/257 (45%), Gaps = 21/257 (8%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + K + +++ L S V V+ E+Y+KA +L+++N+ +A Sbjct: 2 HMNKIKVIAVTALSALVLSACSNSSKEQVEQAPVS------ELYQKAQEYLQDENYRQAI 55 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 Y FP+ A+++ L + Y Y S E Y+ +YP+ ++DYV Y+ Sbjct: 56 RYLEATDNRFPYGEYAQQADLNLIYAYYRNEDYVNTLSTAERYLQKYPQGPHLDYVLYIA 115 Query: 138 GMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G++ + ++ D + + +V + NS Y A+ ++ R Sbjct: 116 GLTNMALGDNLFQDFFGVERSSRETKPREDAYHNFETLVRYFPNSEYTPDAKQRMSYIRE 175 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQ-LVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 LA + EI +YLKR YVA + R Q +L Y D +A +A+ L +AY AL L +A Sbjct: 176 SLAKHQYEIAEFYLKRDAYVAVVNRIQDNLLRLYPDTSYAYKALPMLQQAYAALHLDKQA 235 Query: 247 REVVSLI----QERYPQ 259 +E+ ++ Q+ +P+ Sbjct: 236 QEIAQVLANSKQKEFPE 252 >gi|58617537|ref|YP_196736.1| hypothetical protein ERGA_CDS_08100 [Ehrlichia ruminantium str. Gardel] gi|58417149|emb|CAI28262.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel] Length = 250 Score = 218 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 3/248 (1%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 Y L K I I+ F+V S V + R +YE A+ + + Sbjct: 1 MYHL-KVFKNILVLISCLFIVSCVFLSKERVV--KSVENRTADGIYESALKKSSNKQYKD 57 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + + +PF+ VA K+ +M +F+ Y Y +AA+ E+YI YP+S+++D YY Sbjct: 58 AVKDLEEIDSLYPFSPVAIKARIMMSFLNYELENYSRAATYAEDYINLYPDSEDIDVAYY 117 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 L M+ I D+ DQ + + + V + NS Y++ + + +AAKE Sbjct: 118 LRIMANYMQINDIDRDQSVAYKVSELLDEFVRLFPNSQYLEEVNLRLNMVHEHIAAKEFS 177 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 IG++YL+RGEYVAAI RF +L Y + + E++ R EAY++L D ++ +SL+QE Sbjct: 178 IGKFYLQRGEYVAAIRRFSTILKRYKNTRYFPESVYRTAEAYLSLGDKDAYKKYISLLQE 237 Query: 256 RYPQGYWA 263 W Sbjct: 238 CCVGSEWY 245 >gi|325577680|ref|ZP_08147955.1| competence lipoprotein ComL [Haemophilus parainfluenzae ATCC 33392] gi|325160425|gb|EGC72551.1| competence lipoprotein ComL [Haemophilus parainfluenzae ATCC 33392] Length = 273 Score = 218 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 64/258 (24%), Positives = 108/258 (41%), Gaps = 20/258 (7%) Query: 9 ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68 + I E ++ AL S A+ +++V SV D +Y K L Sbjct: 4 VKIKEKRMRKIKSLALIALTSFAIAAC----SSGNKEVEQASVDD------LYAKGAAAL 53 Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 +E ++S + Y + FP + +++L + Y Y + Y+ Q+P+S Sbjct: 54 QEGSYSDSIRYLKAATERFPGSTYQEQAMLDLIYANYKTQDYTATLVTVDNYLHQFPQSP 113 Query: 129 NVDYVYYLVGMSYA----QMIRDVPYDQRATKL------MLQYMSRIVERYTNSPYVKGA 178 N DY Y+ G++ MI+D RAT+ +V + NSPY + A Sbjct: 114 NRDYAVYMAGLTNLATADNMIQDFFGIDRATRETTSMKTAFSNFQSLVRAFPNSPYSQDA 173 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + ++ LA E+EI ++Y KR +VA R +L Y DA+ E + + EAY Sbjct: 174 VARMAYIKDSLARHELEIAKFYAKRDAWVAVANRVVGMLQQYPDAKATYEGLFLMKEAYE 233 Query: 239 ALALMDEAREVVSLIQER 256 + L A + +I Sbjct: 234 KMGLQQLASQTQQVIDAN 251 >gi|57239503|ref|YP_180639.1| hypothetical protein Erum7760 [Ehrlichia ruminantium str. Welgevonden] gi|58579484|ref|YP_197696.1| hypothetical protein ERWE_CDS_08200 [Ehrlichia ruminantium str. Welgevonden] gi|57161582|emb|CAH58510.1| putative exported lipoprotein [Ehrlichia ruminantium str. Welgevonden] gi|58418110|emb|CAI27314.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Welgevonden] Length = 250 Score = 218 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 3/248 (1%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 Y L K I I+ F+V S V + R +YE A+ + + Sbjct: 1 MYHL-KVFKNILVLISCLFIVSCAFLSKERVV--KSVENRTADGIYESALKKSSNKQYKD 57 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + + +PF+ VA K+ +M +F+ Y Y +AA+ E+YI YP+S+++D YY Sbjct: 58 AVKDLEEIDSLYPFSPVAIKARIMMSFLNYELENYSRAATYAEDYINLYPDSEDIDVAYY 117 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 L M+ I D+ DQ + + + V + NS Y++ + + +AAKE Sbjct: 118 LRIMANYMQINDIDRDQSVAYKVSELLDEFVRLFPNSQYLEEVNLRLNMVHEHIAAKEFS 177 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 IG++YL+RGEYVAAI RF +L Y + + E++ R EAY++L D ++ +SL+QE Sbjct: 178 IGKFYLQRGEYVAAIRRFSTILKRYKNTRYFPESVYRTAEAYLSLGDKDAYKKYISLLQE 237 Query: 256 RYPQGYWA 263 W Sbjct: 238 CCVGSEWY 245 >gi|297184481|gb|ADI20595.1| DNA uptake lipoprotein [uncultured gamma proteobacterium EBAC_27G05] Length = 272 Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 93/249 (37%), Gaps = 19/249 (7%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + FA+ + + FL G D + ++ Y+ A ++ NF A Sbjct: 7 NIRTFAIF-TVILPMLFLSGCNS--------DGPVVEQPEKVYYDLAQRRMQANNFFSAI 57 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E +PF A ++ + + G+ + + E++I P N+DY Y++ Sbjct: 58 EALQAIESRYPFGRYAEQAQSELIYAYFMNGEDEASHEAAEKFIRLNPRHPNIDYAYFMK 117 Query: 138 GMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G++ + + D K +S + R+ S Y A + R+ Sbjct: 118 GIASYTRDKGMFARVFKSDLSNRDISGAKQAFSELSEFLTRFPQSQYAPYASQRLIYLRS 177 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 +A E+ YY+KR YVAA+ R V+ N + A+ + + Y L Sbjct: 178 LIAKSELVAADYYMKRKAYVAALRRANYVIENIPNTSETIRALKVVRDCYRELGYFKLMD 237 Query: 248 EVVSLIQER 256 ++ +I Sbjct: 238 DIQKIIDAN 246 >gi|16272142|ref|NP_438345.1| hypothetical protein HI0177 [Haemophilus influenzae Rd KW20] gi|260580942|ref|ZP_05848766.1| conserved hypothetical protein [Haemophilus influenzae RdAW] gi|1175182|sp|P44553|Y177_HAEIN RecName: Full=Putative UPF0169 lipoprotein HI_0177; Flags: Precursor gi|1573134|gb|AAC21847.1| lipoprotein, putative [Haemophilus influenzae Rd KW20] gi|260092431|gb|EEW76370.1| conserved hypothetical protein [Haemophilus influenzae RdAW] Length = 262 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 17/231 (7%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G S+DV SV E+Y K L+E ++S+A Y + FP + + Sbjct: 17 IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQ 69 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYD 151 ++L + Y Y Q + + ++ Q+ +S N Y Y+ G++ A I+D Sbjct: 70 AMLDLIYANYKTQDYTQVLLMVDSFLHQFTQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129 Query: 152 QRATKL------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 RAT+ +V + NSPY + A + ++ LA E+EI ++Y KR Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKA 189 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +VA R +L Y D + E + + EAY + L A + +I Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240 >gi|326570228|gb|EGE20273.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis BC8] Length = 356 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 11/247 (4%) Query: 24 LTIFFSIAVCFLVGWERQSSR-DVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 L A + G + + D D+V T + Y++A L + A E N Sbjct: 7 LIAAMMAATLTVTGCQSVNGLFDRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEALN 66 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 +P A+++LL + QY A ++ EE+I +YP S++VDY Y+ G+++ Sbjct: 67 NIRTFYPTGQYAQQALLDLIYAQYKANDFEAVLQSTEEFIHRYPNSRSVDYALYVQGVTH 126 Query: 142 AQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 D +L + +++ Y +SPYV A + N A Sbjct: 127 MGGAPKASRLVRFDQSHRDVTYLRLAFRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEH 186 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E+ R+Y+KR VAA R + V Y + EA+A L + L L + A++ L Sbjct: 187 ELAAARWYVKRDAMVAAANRAKWVFQYYPQSTGVPEAIAILAYSNQKLGLTETAKQYKQL 246 Query: 253 IQERYPQ 259 +Q YPQ Sbjct: 247 LQINYPQ 253 >gi|326565267|gb|EGE15452.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis 12P80B1] gi|326575839|gb|EGE25762.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis CO72] Length = 356 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 11/247 (4%) Query: 24 LTIFFSIAVCFLVGWERQSSR-DVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 L A + G + + D D+V T + Y++A L + A E N Sbjct: 7 LIAAMMAATLTVTGCQSVNGLFDRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEALN 66 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 +P A+++LL + QY A ++ EE+I +YP S++VDY Y+ G+++ Sbjct: 67 NIRTFYPTGQYAQQALLDLIYAQYKANDFEAVLQSTEEFIHRYPNSRSVDYALYVQGVTH 126 Query: 142 AQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 D +L + +++ Y +SPYV A + N A Sbjct: 127 MGGAPKASRLVRFDQSHRDVTYLRLAFRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEH 186 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E+ R+Y+KR VAA R + V Y + EA+A L + L L + A++ L Sbjct: 187 ELAAARWYVKRDAMVAAANRAKWVFQYYPQSTGVPEAIAILAYSNQKLGLTETAKQYKQL 246 Query: 253 IQERYPQ 259 +Q YPQ Sbjct: 247 LQINYPQ 253 >gi|326562906|gb|EGE13193.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis 46P47B1] gi|326563653|gb|EGE13905.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis 103P14B1] gi|326573261|gb|EGE23229.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis 101P30B1] Length = 356 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 11/247 (4%) Query: 24 LTIFFSIAVCFLVGWERQSSR-DVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 L A + G + + D D+V T + Y++A L + A E N Sbjct: 7 LIAAMMAATLTVTGCQSVNGLFDRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEALN 66 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 +P A+++LL + QY A ++ EE+I +YP S++VDY Y+ G+++ Sbjct: 67 NIRTFYPTGQYAQQALLDLIYAQYKANDFEAVLQSTEEFIHRYPNSRSVDYALYVQGVTH 126 Query: 142 AQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 D +L + +++ Y +SPYV A + N A Sbjct: 127 MGGAPKASRLVRFDQSHRDVTYLRLAFRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEH 186 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E+ R+Y+KR VAA R + V Y + EA+A L + L L + A++ L Sbjct: 187 ELAAARWYVKRDAMVAAANRAKWVFQYYPQSTGVPEAIAILAYSNQKLGLTETAKQYKQL 246 Query: 253 IQERYPQ 259 +Q YPQ Sbjct: 247 LQINYPQ 253 >gi|296113273|ref|YP_003627211.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis RH4] gi|295920967|gb|ADG61318.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis RH4] gi|326570965|gb|EGE20989.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis BC7] Length = 356 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 11/247 (4%) Query: 24 LTIFFSIAVCFLVGWERQSSR-DVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 L A + G + + D D+V T + Y++A L + A E N Sbjct: 7 LIAAMMAATLTVTGCQSVNGLFDRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEALN 66 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 +P A+++LL + QY A ++ EE+I +YP S++VDY Y+ G+++ Sbjct: 67 NIRTFYPTGQYAQQALLDLIYAQYKANDFEAVLQSTEEFIHRYPNSRSVDYALYVQGVTH 126 Query: 142 AQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 D +L + +++ Y +SPYV A + N A Sbjct: 127 MGGAPKASRLVRFDQSHRDVTYLRLAFRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEH 186 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E+ R+Y+KR VAA R + V Y + EA+A L + L L + A++ L Sbjct: 187 ELAAARWYVKRDAMVAAANRAKWVFQYYPQSTGVPEAIAILAYSNQKLGLTETAKQYKQL 246 Query: 253 IQERYPQ 259 +Q YPQ Sbjct: 247 LQINYPQ 253 >gi|326560262|gb|EGE10650.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis 7169] gi|326566420|gb|EGE16570.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis BC1] Length = 356 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 11/247 (4%) Query: 24 LTIFFSIAVCFLVGWERQSSR-DVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 L A + G + + D D+V T + Y++A L + A E N Sbjct: 7 LIAAMMAATLTVTGCQSVNGLFDRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEALN 66 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 +P A+++LL + QY A ++ EE+I +YP S++VDY Y+ G+++ Sbjct: 67 NIRTFYPTGQYAQQALLDLIYAQYKANDFEAVLQSTEEFIHRYPNSRSVDYALYVQGVTH 126 Query: 142 AQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 D +L + +++ Y +SPYV A + N A Sbjct: 127 MGGAPKASRLVRFDQSHRDVTYLRLAFRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEH 186 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E+ R+Y+KR VAA R + V Y + EA+A L + L L + A++ L Sbjct: 187 ELAAARWYVKRDAMVAAANRAKWVFQYYPQSTGVPEAIAILAYSNQKLGLTETAKQYKQL 246 Query: 253 IQERYPQ 259 +Q YPQ Sbjct: 247 LQINYPQ 253 >gi|32035196|ref|ZP_00135230.1| COG4105: DNA uptake lipoprotein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208591|ref|YP_001053816.1| putative lipoprotein [Actinobacillus pleuropneumoniae L20] gi|165976547|ref|YP_001652140.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303250130|ref|ZP_07336332.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253304|ref|ZP_07339453.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246036|ref|ZP_07528118.1| hypothetical protein appser1_12390 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307248144|ref|ZP_07530172.1| hypothetical protein appser2_11250 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307250377|ref|ZP_07532325.1| hypothetical protein appser4_11570 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252759|ref|ZP_07534650.1| hypothetical protein appser6_12730 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255018|ref|ZP_07536836.1| hypothetical protein appser9_12520 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307257174|ref|ZP_07538946.1| hypothetical protein appser10_11740 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307259454|ref|ZP_07541179.1| hypothetical protein appser11_12510 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307261603|ref|ZP_07543271.1| hypothetical protein appser12_11640 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|126097383|gb|ABN74211.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165876648|gb|ABY69696.1| conserved putative lipoprotein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302647986|gb|EFL78193.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302651193|gb|EFL81347.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306852971|gb|EFM85194.1| hypothetical protein appser1_12390 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306855321|gb|EFM87496.1| hypothetical protein appser2_11250 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306857587|gb|EFM89695.1| hypothetical protein appser4_11570 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859791|gb|EFM91813.1| hypothetical protein appser6_12730 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306861891|gb|EFM93867.1| hypothetical protein appser9_12520 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306864336|gb|EFM96247.1| hypothetical protein appser10_11740 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306866390|gb|EFM98253.1| hypothetical protein appser11_12510 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868726|gb|EFN00535.1| hypothetical protein appser12_11640 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 258 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 118/263 (44%), Gaps = 21/263 (7%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + KF +A +VG + + +++Y K +L++ +++ A Sbjct: 1 MRKFTSLASLVLAGLLVVGCSSANKE-------LEETSAQDLYTKGQTYLQDGDYNSAIR 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 Y + ++ L F Y G+Y +A E ++ YP S ++DYVYYL G Sbjct: 54 YLDAIGAKGGQGTFGEQTQLSLIFANYKIGEYYKALDAAERFVRAYPNSASMDYVYYLAG 113 Query: 139 MSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 +S A++ + D + + IV+ Y S Y + A+ ++ N+ Sbjct: 114 LSNARLGDNFIQDFFGVNRASRALDSVRNAYGSFQTIVQHYPQSQYARDAQNWMAYLINR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A E+ I ++Y +R YVA + R + ++ Y +++ +A++ + +AY + + D A + Sbjct: 174 MAEHELSIVKFYDEREAYVAVVNRVEEMMRFYPESKPTYQALSYMQKAYEQMGVKDSAEK 233 Query: 249 VVSLIQ----ERYPQGYWARYVE 267 V +LI+ + +P+ Y E Sbjct: 234 VAALIEANKDKNFPEAIKPEYSE 256 >gi|326576922|gb|EGE26828.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis O35E] Length = 356 Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 11/247 (4%) Query: 24 LTIFFSIAVCFLVGWERQSSR-DVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 L A + G + + D D+V T + Y++A L + A E N Sbjct: 7 LIAAMMAATLTVTGCQSVNGLFDRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEALN 66 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 +P A+++LL + QY A ++ EE+I +YP S++VDY Y+ G+++ Sbjct: 67 NIRTFYPTGQYAQQALLDLIYAQYKANDFEAVLQSTEEFIHRYPNSRSVDYALYVQGVTH 126 Query: 142 AQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 D +L + +++ Y +SPYV A + N A Sbjct: 127 MGGAPKASRLVRFDQSHRDVTYLRLAFRDFQNLLKHYPDSPYVADAAQRMIAIYNDFAEH 186 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E+ R+Y+KR VAA R + V Y + EA+A L + L L + A++ L Sbjct: 187 ELAAARWYVKRDAMVAAANRAKWVFQYYPQSTGVPEAIAILAYSNQKLGLTETAKQYKHL 246 Query: 253 IQERYPQ 259 +Q YPQ Sbjct: 247 LQINYPQ 253 >gi|119713311|gb|ABL97375.1| predicted secreted competence lipoprotein [uncultured marine bacterium EB80_02D08] Length = 272 Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 96/246 (39%), Gaps = 18/246 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + I LV D + ++ Y++A + +N+ A E Sbjct: 9 LFLVVPIVTLLLVSCNS--------DGPEIEQPEKIYYDQAQRRIAAKNYFGAIESLEAI 60 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF + ++ + +VQ+ + + A + E++I +P N+DY Y++ G+S Sbjct: 61 ETRYPFGKYSEQAQVELIYVQFMNAETEAAHAAAEKFIRLHPRHPNIDYAYFMKGLSSYT 120 Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 D K ++ + R+ +S Y A+ RN +A E Sbjct: 121 RDNSFIVRMTDTDLSNRDISGAKESFSELTEFLTRFPDSQYATYAKQRNIYLRNMIARNE 180 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + YY+ ++AAI R V+ N ++ A+ L E+Y +L ++ + +I Sbjct: 181 LAAADYYVSVDAHIAAIRRANYVIENIPNSSENYRALKILEESYDSLGYVELLEDTRKII 240 Query: 254 QERYPQ 259 Y Sbjct: 241 TLNYKD 246 >gi|254468028|ref|ZP_05081434.1| competence lipoprotein ComL [beta proteobacterium KB13] gi|207086838|gb|EDZ64121.1| competence lipoprotein ComL [beta proteobacterium KB13] Length = 268 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 108/245 (44%), Gaps = 11/245 (4%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + I+ FL G + + T + +Y KA F +++F K +Y + + Sbjct: 5 LTLFISSIFLAGCFIFGEPTEFDE--TTGQSPEWIYGKAEAFTDQRDFRKTIDYLEKLVK 62 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-- 143 +P + + L A+ Y G+ + + S ++IT YP ++DY YYL G++ Q Sbjct: 63 RYPDNKLIPSARLNLAYAYYKFGQKELSTSTVNQFITLYPSHPSMDYAYYLKGLNLYQER 122 Query: 144 -------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 M D K S +V++Y NS Y + + + N++A ++ + Sbjct: 123 GIINKLTMQDISDRDVNNLKQAFDAFSELVKKYPNSKYSQDSTDRMIYLMNKIAEYDLHV 182 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 RYY+KR YVAA+ R + V Y ++ H EE++ AY L L D +I Sbjct: 183 ARYYMKRRAYVAALNRAKNVYTTYPESIHVEESLVIQYIAYKELKLKDLEIATKKVIDLN 242 Query: 257 YPQGY 261 YP+ Sbjct: 243 YPENK 247 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 47/133 (35%), Gaps = 31/133 (23%) Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 DQR + + Y+ ++V+RY ++ + AR + + KE+ + + Sbjct: 46 DQRDFRKTIDYLEKLVKRYPDNKLIPSARLNLAYAYYKFGQKELS-----------TSTV 94 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEA-YVALALMD----------------EAREVVSLI 253 +F + Y + A Y +++ +A + S + Sbjct: 95 NQF---ITLYPSHPSMDYAYYLKGLNLYQERGIINKLTMQDISDRDVNNLKQAFDAFSEL 151 Query: 254 QERYPQGYWARYV 266 ++YP +++ Sbjct: 152 VKKYPNSKYSQDS 164 >gi|190150448|ref|YP_001968973.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263792|ref|ZP_07545398.1| hypothetical protein appser13_12030 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915579|gb|ACE61831.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870913|gb|EFN02651.1| hypothetical protein appser13_12030 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 258 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 119/263 (45%), Gaps = 21/263 (7%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + KF +A +VG + + +++Y K +L++ +++ A Sbjct: 1 MRKFTSLASLVLAGLLVVGCSSANKE-------LEETSAQDLYTKGQTYLQDGDYNSAIR 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 Y + + ++ L F Y G+Y +A E ++ YP S ++DYVYYL G Sbjct: 54 YLDAIGAKGGQGTLGEQTQLSLIFANYKIGEYYKALDAAERFVRAYPNSASMDYVYYLAG 113 Query: 139 MSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 +S A++ + D + + IV+ Y S Y + A+ ++ N+ Sbjct: 114 LSNARLGDNFIQDFFGVNRASRALDSVRNAYGSFQTIVQHYPQSQYARDAQNWMAYLINR 173 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A E+ I ++Y +R YVA + R + ++ Y +++ +A++ + +AY + + D A + Sbjct: 174 MAEHELSIVKFYDEREAYVAVVNRVEEMMRFYPESKPTYQALSYMQKAYEQMGVKDSAEK 233 Query: 249 VVSLIQ----ERYPQGYWARYVE 267 V +LI+ + +P+ Y E Sbjct: 234 VAALIEANKDKNFPEAIKPEYSE 256 >gi|323143513|ref|ZP_08078193.1| outer membrane assembly lipoprotein YfiO [Succinatimonas hippei YIT 12066] gi|322416707|gb|EFY07361.1| outer membrane assembly lipoprotein YfiO [Succinatimonas hippei YIT 12066] Length = 264 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 57/249 (22%), Positives = 102/249 (40%), Gaps = 15/249 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + KF L + AV ++D + D +Y A + +F +A + Sbjct: 12 MIKFFLPLIVGAAVALTACSSANYNKDEVPNIAPDA-----MYSVAQNAMASGDFQRAKQ 66 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 Y +PF +A + L +V Y ++ ++ ++ P S+ DYV Y+ G Sbjct: 67 YLEAIDSRYPFGELADQVQLDLIYVYYKMRDSEKTSAQINRFMRLNPTSQYTDYVMYMTG 126 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ QM D+ D L+ ++E Y S Y A + + Q Sbjct: 127 LNQIQMRSDILQDFIGLNRSQKDPTQYYEALKTFRNLIETYPESKYAADAHQRMIFIKQQ 186 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA +E+ I YY +RG Y++ I Q +L +Y ++ E A+A + Y L L + A Sbjct: 187 LAEREMAIANYYYERGSYLSTIRHCQNILYSYRGTQYLEPALALMARCYDDLGLPEAAAN 246 Query: 249 VVSLIQERY 257 S+ + + Sbjct: 247 ARSVQEASF 255 >gi|330974765|gb|EGH74831.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. aceris str. M302273PT] Length = 174 Score = 214 bits (547), Expect = 7e-54, Method: Composition-based stats. Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 10/174 (5%) Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF A ++ L + Y G+ + A S E +I +P+ NVDY YY+ G Sbjct: 1 KLKALESRYPFGRYADQAQLELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKG 60 Query: 139 MSYAQMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ D A + +++ R+ NS Y A+ + RN Sbjct: 61 LTSFDQDVGLLARFLPLDQTKRDPGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNL 120 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 LA+ E+ + YYL R YVAA R + V+ N+ + + +A +VE+Y L L Sbjct: 121 LASYEIHVADYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQRLHL 174 >gi|9971938|gb|AAG10500.1|AF279106_62 predicted secreted lipoprotein [uncultured marine gamma proteobacterium EBAC31A08] Length = 272 Score = 214 bits (547), Expect = 7e-54, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 95/253 (37%), Gaps = 18/253 (7%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 L I I LV D + ++ Y++A + +N+ A + Sbjct: 7 LKLFIVLPIVTLLLVSCNS--------DGPEIEQPEKIYYDQAQRRMAGKNYFGAIDSLE 58 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 +PF A ++ + + Q+ + + A + E++I +P N+DY Y++ G+S Sbjct: 59 AIESRYPFGKYAEQAQVELIYAQFMNAETEAAHAAAEKFIRLHPRHPNIDYAYFMKGLSS 118 Query: 142 AQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 D K ++ + R+ +S Y A+ RN +A Sbjct: 119 YTRDNSFIVRMTDTDLSNRDISGAKESFSELTEFLTRFPDSQYSTYAKQRNIYLRNMIAR 178 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 E+ YY+ ++AAI R V+ N ++ A+ L +Y +L ++ + Sbjct: 179 NELAAADYYVSVDAHIAAIRRANYVIENIPNSSENYRALKILEASYESLGYIELLEDTKK 238 Query: 252 LIQERYPQGYWAR 264 +I Y + Sbjct: 239 IISINYQDEQSKK 251 >gi|153215113|ref|ZP_01949820.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|124114904|gb|EAY33724.1| conserved hypothetical protein [Vibrio cholerae 1587] Length = 214 Score = 214 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 10/189 (5%) Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 +PF + + L + Y + E + P + +D+V Y+ Sbjct: 24 RKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMR 83 Query: 138 GMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+++ R+ D K ++++RY NSPY + A+ + +N Sbjct: 84 GLTHMAQDRNFMHDLFNIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKN 143 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 +LA ++ +YL+R ++AAI R Q + Y D E A +++A +EAY L L D Sbjct: 144 RLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARKSLAIQLEAYQQLGLTDAIE 203 Query: 248 EVVSLIQER 256 L+Q Sbjct: 204 RTKQLMQLN 212 >gi|114775489|ref|ZP_01451057.1| probable transmembrane protein [Mariprofundus ferrooxydans PV-1] gi|114553600|gb|EAU55981.1| probable transmembrane protein [Mariprofundus ferrooxydans PV-1] Length = 228 Score = 214 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 55/214 (25%), Positives = 99/214 (46%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 + YEK+ + N+++A S +P++ A ++ L+ F Y ++ + L Sbjct: 15 AQRAYEKSKHQVTIGNYAEATMALEHFSSKYPYSKFAIQAELLRIFAAYKDDEFVLSEVL 74 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + +I +P N DY Y++ MS + D K ++ +++ + +S Y K Sbjct: 75 SQRFIDLHPGHANADYAMYMLAMSQYKQRASAEKDPTQNKAAIKSFKKLIREHPDSSYAK 134 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 + Y+ N LA E+ IG++Y R YVAA RFQ V+ +Y EEA+ L + Sbjct: 135 QGKMYLQSLYNSLAKHELTIGKFYFDRDRYVAAANRFQQVIQHYQTTPSIEEALYYLASS 194 Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 Y + + +A + L+Q YP W+ E + Sbjct: 195 YAKMDMKTDASQTAQLLQHNYPHSSWSSKAERFL 228 >gi|322514977|ref|ZP_08067989.1| DNA uptake lipoprotein [Actinobacillus ureae ATCC 25976] gi|322119030|gb|EFX91194.1| DNA uptake lipoprotein [Actinobacillus ureae ATCC 25976] Length = 260 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 120/264 (45%), Gaps = 21/264 (7%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + KF + +VG +++++ + +++Y K +L++ +++ A Sbjct: 1 MRKFTSLASLMLVGLLVVGCSNSANKEL------EESSAQDLYTKGQTYLQDGDYNSAIR 54 Query: 79 YFNQCSRDF-PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 Y + + ++ L + Y G+Y +A E ++ YP S ++DYVYYL Sbjct: 55 YLDAVGTKGGQQSAFGEQTQLSLIYANYKVGEYYKALDAAERFVRAYPNSASMDYVYYLA 114 Query: 138 GMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+S A++ + D + + IV+ Y S Y + A+ ++ N Sbjct: 115 GLSNARLGDNFIQDFFGVNRASRALDSVRNAYGSFQTIVQHYPQSKYAQDAKNWMGYLIN 174 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 ++A E+ I ++Y R YVA + R + ++ Y +++ EA+A + +AY + + D A Sbjct: 175 RMAEHELAIVKFYDDREAYVAVVNRVEEMMRFYPESKPTYEALAYMQKAYEQIGIKDSAE 234 Query: 248 EVVSLIQER----YPQGYWARYVE 267 +V +LI+ +P+ Y E Sbjct: 235 KVAALIEANKDKSFPEIIKPEYSE 258 >gi|189426001|ref|YP_001953178.1| outer membrane assembly lipoprotein YfiO [Geobacter lovleyi SZ] gi|189422260|gb|ACD96658.1| outer membrane assembly lipoprotein YfiO [Geobacter lovleyi SZ] Length = 248 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 58/253 (22%), Positives = 109/253 (43%), Gaps = 10/253 (3%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 +L ++ L + A+ L G D E+Y + ++ + +A Sbjct: 2 KLLRYRLLVA-GTALLMLQGCASAPKTD---------PTPEELYAQGETAFQKSRYEQAV 51 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E + + FP +A ++ + A + + +A + E++ +P + + Y Sbjct: 52 ESWKKVKETFPEPELAARAEIGIANAYFLNHDFIEAGAAYEDFRKLHPTHELAQFSLYRQ 111 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 G++ +I + DQ TK L + +Y S YV + + R +LA E+ +G Sbjct: 112 GLASFNLITGIDTDQTPTKNALALFESFIRQYPKSQYVAKVQEKIADCRGKLAQYEIYVG 171 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 R+Y + Y AAI RF+ L N+ D +E + L +AY+A D+A+ V+S + Y Sbjct: 172 RFYYRTDNYQAAIGRFEGALTNFPDYTGNDETLFYLAKAYIANRQSDKAQTVLSRLIREY 231 Query: 258 PQGYWARYVETLV 270 P G + L+ Sbjct: 232 PTGKYLDDARKLL 244 >gi|91762852|ref|ZP_01264817.1| putative competence lipoprotein ComL [Candidatus Pelagibacter ubique HTCC1002] gi|91718654|gb|EAS85304.1| putative competence lipoprotein ComL [Candidatus Pelagibacter ubique HTCC1002] Length = 282 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 62/236 (26%), Positives = 116/236 (49%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 F+ ++ + + V + Y++ L+ + A + FN+ FP + Sbjct: 15 TFIWSCGDKTKKISEIVEVDMEMQMSDAYKEGYFELQRGDVLLAAKKFNEAELLFPQSPW 74 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A KS +M+A+ Y+ Y A E Y+ YP K+ Y ++L+GMS+ + I D D Sbjct: 75 AAKSAIMAAYAYYTQDYYGDAIFELERYLVTYPNHKDKVYAHFLLGMSFYEQIVDEKKDL 134 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 ++ + ++ Y ++ + A+F + + LAAKE+ I RYYLK+ +++ A+ R Sbjct: 135 KSILDSKEQFETLIRDYPSTEFAMDAKFKIDLINEILAAKEMYIARYYLKKTKWIPALNR 194 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 F+ V+ +Y+ + EEA+ RLVE L L++E+++ S + Y W + Sbjct: 195 FKTVVKDYNTTIYTEEALHRLVEINYRLGLINESKKYASTLGYNYQSSDWYKNSYK 250 >gi|332184382|gb|AEE26636.1| Competence protein [Francisella cf. novicida 3523] Length = 274 Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 110/256 (42%), Gaps = 12/256 (4%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + +F I + + L +D L V +Y KA ++ + + A Sbjct: 1 MKRFLYLIVITFMLLLLSSCG--PKKDSELPQVYTGYTASFIYAKAHEQMRNEKYFDAIR 58 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + +PF +A K ++ +V Y + A +LG+++I YP S YVYY++G Sbjct: 59 SYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQFIKMYPYSIYKGYVYYMIG 118 Query: 139 MSYAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + R + +D + R ++ N +V A+ + N Sbjct: 119 VVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFERAIQLDPNGSFVPDAKRRMVFINNT 178 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A +I +Y KRG Y AAI R V+ NY + E+A+ + AY L L D+A+ Sbjct: 179 IARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDALVLTIRAYNKLGLYDQAKA 238 Query: 249 VVSLIQERYPQGYWAR 264 + ++++ YP+ + + Sbjct: 239 NIRVLKKNYPKNKFIK 254 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 29/70 (41%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 ++ +Y AI ++ ++A Y AE+ M L+ Y A + + YP Sbjct: 48 MRNEKYFDAIRSYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQFIKMYPYS 107 Query: 261 YWARYVETLV 270 + YV ++ Sbjct: 108 IYKGYVYYMI 117 >gi|254449016|ref|ZP_05062470.1| competence protein ComL [gamma proteobacterium HTCC5015] gi|198261410|gb|EDY85701.1| competence protein ComL [gamma proteobacterium HTCC5015] Length = 261 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 90/251 (35%), Gaps = 17/251 (6%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + L I F++ L G D + +Y++A + F A Sbjct: 18 RRILFIGFAVTALMLSGCASDIDD-------LDRWDEVRLYQEAKGAMARGEFQTAIRRL 70 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + +PF A + L + + + + + S + + P VDY Y+ G++ Sbjct: 71 ETLNARYPFDDYAIQGQLDLMYAYFKSMRMEDVISTAQRFARLNPTHPKVDYALYMQGLA 130 Query: 141 YAQMIRD-----VPYDQR-----ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 + + P D + + +V R+ +S Y + RNQLA Sbjct: 131 DFDLNKSFLQRWFPRDPSEYELPVLERSFNAFAELVRRFPDSEYAPDGERRMIYLRNQLA 190 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 + +Y++R +++A R Q + Y+ A E+A+ + +Y L + A Sbjct: 191 EACMSRATWYVRREAWLSAAQRAQQCIQRYNGAPAVEKALGIMANSYEKLDMPQLASATR 250 Query: 251 SLIQERYPQGY 261 + + P Sbjct: 251 NRTSQTAPTSK 261 >gi|134301740|ref|YP_001121708.1| lipoprotein [Francisella tularensis subsp. tularensis WY96-3418] gi|134049517|gb|ABO46588.1| hypothetical lipoprotein [Francisella tularensis subsp. tularensis WY96-3418] Length = 274 Score = 208 bits (531), Expect = 5e-52, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 109/256 (42%), Gaps = 12/256 (4%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + +F I + + L +D L V +Y KA ++ Q + A Sbjct: 1 MKRFLYLIIITFMLLLLSSCG--PKKDSELPQVYTGYTASFIYAKAHEQMQNQKYFDAIR 58 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + +PF +A K ++ +V Y + A +LG+++I +P S YVYY++G Sbjct: 59 SYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQFIKMHPYSIYKGYVYYMIG 118 Query: 139 MSYAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + R + +D + + ++ +V A+ + N Sbjct: 119 VVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLDPTGSFVPDAKRRMIFINNI 178 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A +I +Y KRG Y AAI R V+ NY + E+A+ + AY L L D+A+ Sbjct: 179 IARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDALVLTIRAYNKLGLYDQAKA 238 Query: 249 VVSLIQERYPQGYWAR 264 + ++++ YP+ + + Sbjct: 239 NIRVLKKNYPKNKFIK 254 >gi|88800778|ref|ZP_01116335.1| competence lipoprotein ComL, putative [Reinekea sp. MED297] gi|88776484|gb|EAR07702.1| competence lipoprotein ComL, putative [Reinekea sp. MED297] Length = 277 Score = 208 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 101/247 (40%), Gaps = 20/247 (8%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 AL + + L G S+D + YE A +L+++N+S A E Sbjct: 11 ALRVGLLAVLVALSGCASLPSQDT----------ETAYYETAQEYLEKRNYSMAVERLTA 60 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 FPF A S L + Y + A + + E +VDY +++ MSY Sbjct: 61 LRDRFPFGRYADASALDLMYAYYGMNDFANALVEADRFTRLNSEHPDVDYAWFVRSMSYY 120 Query: 143 QMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 ++ + + +S+ RY +S Y A + + ++ LA Sbjct: 121 ELFLTNRGILGKADPAKRSAEQGQKAFRALSQFTARYPDSRYRPEALDAMVILKDALARH 180 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E+ + YY++R ++AA R + V+ +Y +A+ L+EAY AL + + V+S Sbjct: 181 ELVVADYYIRREAWIAAAERAKTVVEHYPGVTAVGDALVVLIEAYDALDMPTDRSLVLSR 240 Query: 253 IQERYPQ 259 + YP Sbjct: 241 LTNDYPD 247 >gi|56708306|ref|YP_170202.1| lipoprotein [Francisella tularensis subsp. tularensis SCHU S4] gi|89256089|ref|YP_513451.1| lipoprotein [Francisella tularensis subsp. holarctica LVS] gi|110670777|ref|YP_667334.1| lipoprotein [Francisella tularensis subsp. tularensis FSC198] gi|118497848|ref|YP_898898.1| competence lipoprotein ComL [Francisella tularensis subsp. novicida U112] gi|167010774|ref|ZP_02275705.1| competence lipoprotein ComL [Francisella tularensis subsp. holarctica FSC200] gi|169656566|ref|YP_001428171.2| lipoprotein [Francisella tularensis subsp. holarctica FTNF002-00] gi|187931811|ref|YP_001891796.1| competence lipoprotein ComL [Francisella tularensis subsp. mediasiatica FSC147] gi|224457426|ref|ZP_03665899.1| competence lipoprotein ComL [Francisella tularensis subsp. tularensis MA00-2987] gi|254367417|ref|ZP_04983443.1| conserved hypothetical lipoprotein [Francisella tularensis subsp. holarctica 257] gi|254369096|ref|ZP_04985108.1| hypothetical protein FTAG_00025 [Francisella tularensis subsp. holarctica FSC022] gi|254370789|ref|ZP_04986794.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254373203|ref|ZP_04988692.1| conserved hypothetical protein [Francisella tularensis subsp. novicida GA99-3549] gi|254374658|ref|ZP_04990139.1| conserved hypothetical protein [Francisella novicida GA99-3548] gi|254875127|ref|ZP_05247837.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|290954526|ref|ZP_06559147.1| competence lipoprotein ComL [Francisella tularensis subsp. holarctica URFT1] gi|295312042|ref|ZP_06802857.1| competence lipoprotein ComL [Francisella tularensis subsp. holarctica URFT1] gi|56604798|emb|CAG45877.1| conserved hypothetical lipoprotein [Francisella tularensis subsp. tularensis SCHU S4] gi|89143920|emb|CAJ79139.1| conserved hypothetical lipoprotein [Francisella tularensis subsp. holarctica LVS] gi|110321110|emb|CAL09260.1| conserved hypothetical lipoprotein [Francisella tularensis subsp. tularensis FSC198] gi|118423754|gb|ABK90144.1| competence lipoprotein ComL [Francisella novicida U112] gi|134253233|gb|EBA52327.1| conserved hypothetical lipoprotein [Francisella tularensis subsp. holarctica 257] gi|151569032|gb|EDN34686.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|151570930|gb|EDN36584.1| conserved hypothetical protein [Francisella novicida GA99-3549] gi|151572377|gb|EDN38031.1| conserved hypothetical protein [Francisella novicida GA99-3548] gi|157122046|gb|EDO66186.1| hypothetical protein FTAG_00025 [Francisella tularensis subsp. holarctica FSC022] gi|164551634|gb|ABU61215.2| lipoprotein with TPR domain [Francisella tularensis subsp. holarctica FTNF002-00] gi|187712720|gb|ACD31017.1| competence lipoprotein ComL [Francisella tularensis subsp. mediasiatica FSC147] gi|254841126|gb|EET19562.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282159537|gb|ADA78928.1| lipoprotein with TPR domain [Francisella tularensis subsp. tularensis NE061598] gi|332678563|gb|AEE87692.1| Putative component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Francisella cf. novicida Fx1] Length = 274 Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 110/256 (42%), Gaps = 12/256 (4%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + +F I + + L +D L V +Y KA ++ Q + A Sbjct: 1 MKRFLYLIIITFMLLLLSSCG--PKKDSELPQVYTGYTASFIYAKAHEQMQNQKYFDAIR 58 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + +PF +A K ++ +V Y + A +LG+++I YP S YVYY++G Sbjct: 59 SYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQFIKMYPYSIYKGYVYYMIG 118 Query: 139 MSYAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + R + +D + + ++ N +V A+ + N Sbjct: 119 VVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLDPNGSFVPDAKRRMVFINNI 178 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A +I +Y KRG Y AAI R V+ NY + E+A+ + AY L L D+A+ Sbjct: 179 IARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDALVLTIRAYNKLGLYDQAKA 238 Query: 249 VVSLIQERYPQGYWAR 264 + ++++ YP+ + + Sbjct: 239 NIRVLKKNYPKNKFIK 254 >gi|33151687|ref|NP_873040.1| putative lipoprotein [Haemophilus ducreyi 35000HP] gi|18203223|sp|Q9L7A6|Y470_HAEDU RecName: Full=UPF0169 lipoprotein HD_0470; Flags: Precursor gi|6942293|gb|AAF32395.1|AF224466_2 hypothetical lipoprotein [Haemophilus ducreyi] gi|33147908|gb|AAP95429.1| conserved putative lipoprotein [Haemophilus ducreyi 35000HP] Length = 260 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 21/264 (7%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K + +A ++G Q+ + ++ + +Y +A L++ +++ A Sbjct: 1 MRKLNSLVSLVLAGLLVIGCSNQNQTEQ------EILSAQALYTQAQTQLEKGDYASAIA 54 Query: 79 YFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 F + A + L F Y G+Y +A SL E ++ YP S N+DYV+YLV Sbjct: 55 SFEKMGSRNVQANLFGEQIQLSLIFAHYKTGEYYKALSLAERFVRAYPNSNNMDYVHYLV 114 Query: 138 GMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+S ++ + D + + IV Y S YV A+ ++ N Sbjct: 115 GLSNVRLGDNFIQDFFHVNRSSRTIESIRNAYGNFQMIVRIYPQSQYVNDAQQWMVYLLN 174 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 ++A E+ I ++Y KR VA + R + +L Y ++ +A+ + +AY + L D Sbjct: 175 RMAEHELSIVKFYDKRDASVAVVNRVEEMLRFYPASKSTFDALPYMQKAYQRMGLKDSEA 234 Query: 248 EVVSLIQER----YPQGYWARYVE 267 +V LI+ +P+ Y + Sbjct: 235 KVAELIEMNKAKVFPKITKPEYSK 258 >gi|261494333|ref|ZP_05990827.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309982|gb|EEY11191.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica serotype A2 str. OVINE] Length = 259 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 22/264 (8%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + KF +A F+ G S++++ +V D +Y K +L++ +++ A Sbjct: 1 MRKFKSLATLVLAGLFVAGCS-NSNKELEQSNVQD------LYGKGQTYLQDGDYNSAIR 53 Query: 79 YFNQCSRDF-PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 Y ++G+ ++ L + QY G+Y +A E + YP + N+DYV+YL Sbjct: 54 YLEAVGTKGGQYSGLGEQTQLSLIYAQYKVGEYYKALDAAERFARSYPNAANMDYVFYLA 113 Query: 138 GMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+S A++ + D + IV+RY S Y + A+ ++ N Sbjct: 114 GLSNARLSDNFIQDFFGVNRASRAVDNVRNAYGNFQTIVQRYPQSQYAQDAQNWMNYLFN 173 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 +LA E+ + ++Y +R YVA + R + +L Y + ++A+ L EAY + + D + Sbjct: 174 RLAEHELAVVKFYDERNAYVAVVNRIEEMLRFYPNTLATKQALPYLKEAYKQMNIPDAEQ 233 Query: 248 EVVSLIQER----YPQGYWARYVE 267 + LIQE P +Y E Sbjct: 234 KTELLIQENESKELPNPEKPKYGE 257 >gi|115314565|ref|YP_763288.1| hypothetical protein FTH_0702 [Francisella tularensis subsp. holarctica OSU18] gi|115129464|gb|ABI82651.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica OSU18] Length = 274 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 110/256 (42%), Gaps = 12/256 (4%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + +F I + + L +D L V +Y KA ++ Q + A Sbjct: 1 MKRFLYLIIITFMLLLLSSCG--PKKDSELPQVYTGYTASFIYAKAHEQMQNQKYFDAIR 58 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + +PF +A K ++ +V Y + A +LG+++I YP S YVYY++G Sbjct: 59 SYKSLVAQYPFTSLAEKGMVDLIYVYYMDDESTMALALGQQFIKMYPYSIYKGYVYYMIG 118 Query: 139 MSYAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + R + +D + + ++ N +V A+ + N Sbjct: 119 VVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLDPNGSFVPDAKRRMVFINNI 178 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A +I +Y KRG Y AAI R V+ NY + E+A+ + AY L L D+A+ Sbjct: 179 IARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDALVLTIRAYNKLGLYDQAKA 238 Query: 249 VVSLIQERYPQGYWAR 264 + ++++ YP+ + + Sbjct: 239 NIRVLKKNYPKNKFIK 254 >gi|167627647|ref|YP_001678147.1| competence lipoprotein ComL [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241668215|ref|ZP_04755793.1| competence lipoprotein ComL [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876750|ref|ZP_05249460.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167597648|gb|ABZ87646.1| competence lipoprotein ComL [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254842771|gb|EET21185.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 274 Score = 204 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 110/254 (43%), Gaps = 12/254 (4%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + +F I + + L +D L V +Y KA ++ + + A Sbjct: 1 MKRFLYLIAAAFMLMLLASCG--PKKDSELPQVYTGFTASFIYAKAHEQMQNEKYFDAIR 58 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + +PF +A K ++ +V Y + A +LG+++I YP S YVYY++G Sbjct: 59 SYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQFIKMYPYSSYKGYVYYMIG 118 Query: 139 MSYAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + R + +D + + ++ +V A+ + N Sbjct: 119 VVGFEDGRGILQTYAPYDMNYHDPTGYQDAYVNFEKAIKLDPKGSFVPDAKRRMIYINNI 178 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A +I ++Y KRG Y AA+ R ++ NY + ++A+ + AY L L D+A++ Sbjct: 179 IAEHYYDIAKFYYKRGAYNAALDRASQIIRNYPQSTVTQDALVLTIRAYNKLGLYDQAKD 238 Query: 249 VVSLIQERYPQGYW 262 + ++++ YP+ + Sbjct: 239 NIRVLKKNYPKNKF 252 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 33/74 (44%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 Y+ A + K ++ A + +Q R++P + V + +L+++ G Y QA Sbjct: 180 AEHYYDIAKFYYKRGAYNAALDRASQIIRNYPQSTVTQDALVLTIRAYNKLGLYDQAKDN 239 Query: 117 GEEYITQYPESKNV 130 YP++K V Sbjct: 240 IRVLKKNYPKNKFV 253 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 29/70 (41%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 ++ +Y AI ++ ++A Y AE+ M L+ Y A + + YP Sbjct: 48 MQNEKYFDAIRSYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQFIKMYPYS 107 Query: 261 YWARYVETLV 270 + YV ++ Sbjct: 108 SYKGYVYYMI 117 >gi|330813742|ref|YP_004357981.1| putative competence lipoprotein ComL [Candidatus Pelagibacter sp. IMCC9063] gi|327486837|gb|AEA81242.1| putative competence lipoprotein ComL [Candidatus Pelagibacter sp. IMCC9063] Length = 279 Score = 204 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 67/246 (27%), Positives = 127/246 (51%), Gaps = 3/246 (1%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 ++ F G + ++ ++++ T + +R +Y +A+L K + A E F + ++ Sbjct: 10 LLIFSLIFAYGCSSK-NKTIFVEPKTTIPLER-LYTEALLNYKNNKYQDAVELFEEVEKN 67 Query: 87 FPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 + F A KSLLM ++ Y +Y ++ + +++ +Y +KN+DYV YL+ M + I Sbjct: 68 YSFNTEWASKSLLMRGYIYYEVSRYVESLEILKKFKMRYAGNKNMDYVEYLIAMCLFEQI 127 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 + Q T L + +I+ Y NS Y + ++F + + ++QLA KE+ I RYY +R + Sbjct: 128 NIIALSQENTLLTERQFKKIILNYPNSRYAEDSKFKLDLIQDQLAGKEMYIARYYTEREK 187 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 + A+ R VL + + EEA+ RLVE + L + AR+ S++ Y W + Sbjct: 188 WGPALVRLNKVLKYHETTVYIEEALHRLVEIHYKLGNIPAARKYASILGYNYNDSDWYKK 247 Query: 266 VETLVK 271 +V+ Sbjct: 248 SYNIVE 253 >gi|148244619|ref|YP_001219313.1| competence lipoprotein ComL [Candidatus Vesicomyosocius okutanii HA] gi|146326446|dbj|BAF61589.1| competence lipoprotein ComL [Candidatus Vesicomyosocius okutanii HA] Length = 255 Score = 204 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 14/255 (5%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L I V L G Q +++ ++S+T + + +A +KA + F Q Sbjct: 4 LFIILPFLVLLLNGCSWQ--KEIKIESITKGWSPKTFFTQAKEQESLGLTNKAIKLFEQL 61 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P + A +S L A+ Y Y QA YI YPE + Y YYL G+ Sbjct: 62 QATYPGSKYALQSKLEIAYALYKNKDYDQAIYHLNNYIKFYPEHFSTPYAYYLRGVISQD 121 Query: 144 MIRDV---------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 R + + Y +++++ + Y + + RN L+ E+ Sbjct: 122 KSRSFLDDYFTDSAQRSVNSVRNAFNYYLALIDKFPKTKYTEDTITRLVALRNILSRHEL 181 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 I YY K+G +AAI R + ++ Y + A+ + Y A+ A++ +++ Sbjct: 182 FIAIYYTKKGANIAAINRTKFIVEKYQNTPSVPAALHLMATNYDAINAGTLAKDTRRVLE 241 Query: 255 ERYPQGYWARYVETL 269 + YP W +L Sbjct: 242 KNYP---WYTPYYSL 253 >gi|261493666|ref|ZP_05990185.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261310666|gb|EEY11850.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 259 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 22/264 (8%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + KF +A F+ G S++++ +V D +Y K +L++ +++ A Sbjct: 1 MRKFKSLATLVLAGLFVAGCS-NSNKELEQSNVQD------LYGKGQTYLQDGDYNSAIR 53 Query: 79 YFNQCSRDF-PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 Y ++G+ ++ L + QY G+Y +A E + YP + N+DYV+YL Sbjct: 54 YLEAVGTKGGQYSGLGEQTQLSLIYAQYKVGEYYKALDAAERFARSYPNAANMDYVFYLA 113 Query: 138 GMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+S A++ + D + IV+RY S Y + A+ ++ N Sbjct: 114 GLSNARLSDNFIQDFFGVNRASRAVDNVRNAYGNFQTIVQRYPQSQYAQDAQNWMNYLFN 173 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 +LA E+ + ++Y +R YVA + R + +L Y + ++A+ L EAY + + D + Sbjct: 174 RLAEHELAVVKFYDERNAYVAVVNRIEEMLRFYPNTLATKQALPYLKEAYKQMNIPDAEQ 233 Query: 248 EVVSLIQE----RYPQGYWARYVE 267 + LIQE P +Y E Sbjct: 234 KTELLIQEYESKELPNPEKPKYGE 257 >gi|269958518|ref|YP_003328305.1| putative DNA uptake lipoprotein ComL [Anaplasma centrale str. Israel] gi|269848347|gb|ACZ48991.1| putative DNA uptake lipoprotein ComL [Anaplasma centrale str. Israel] Length = 290 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 71/213 (33%), Positives = 106/213 (49%), Gaps = 3/213 (1%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++YE + KA F++ +PF+ +A L++A Y G Y +AASL Sbjct: 34 HKLYEDGLRLFHSGQHKKAVAIFDKIEALYPFSQMAIDGSLVAAVSHYELGNYAEAASLA 93 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E YI YP SKN+DY YY+ + + D+ DQ + S V + NS Y+ Sbjct: 94 ESYIDAYPSSKNIDYAYYVRVTAKYMQVPDLGLDQGVALEVRNLASEFVRMFPNSRYLAE 153 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 + + LAA+E IG +YL+RG ++AAI RF +++ Y D+ +A E + RLVEAY Sbjct: 154 VSQRLAAVQQHLAAREFMIGDFYLRRGGFIAAIKRFNSLVSGYPDSVYAHEGLYRLVEAY 213 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLV 270 AL A +S + E P W E L+ Sbjct: 214 TALGDRQSAAMYLSRLGENSP---WRVKAERLL 243 >gi|158522066|ref|YP_001529936.1| DNA uptake lipoprotein-like protein [Desulfococcus oleovorans Hxd3] gi|158510892|gb|ABW67859.1| DNA uptake lipoprotein-like protein [Desulfococcus oleovorans Hxd3] Length = 255 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 92/211 (43%), Gaps = 9/211 (4%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + A+ + + +C + G + + +E+ ++ + + + K+ E Sbjct: 32 MKQLAVILSALLMICAMAGCAHK---------PVQEKSAQELADEGTRYFDKGRYKKSIE 82 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F +PF+ + + L A ++ +Y+ A S E + +P ++V +V + G Sbjct: 83 AFENLRDWYPFSKLTTLADLKVADAYFNMEEYESAVSAYENFERLHPRHESVPFVIFRTG 142 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 + + + + DQ + SR+V Y +S Y A Y+ R LAA E+ + + Sbjct: 143 LCHFNRLDTIDRDQTPAHRAIDAFSRLVRAYPDSEYASQATDYIHQCRESLAAHELYVAK 202 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 +Y K Y +A+ RF+ ++ Y D E A Sbjct: 203 FYFKTKRYRSALYRFKQIIEKYPDVGDIETA 233 >gi|189183077|ref|YP_001936862.1| ComL-like lipoprotein [Orientia tsutsugamushi str. Ikeda] gi|189179848|dbj|BAG39628.1| ComL-like lipoprotein [Orientia tsutsugamushi str. Ikeda] Length = 264 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 122/256 (47%), Gaps = 8/256 (3%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 +++F T+F + + + ++ + L + + Y +A L +++ ++ Sbjct: 11 LLNMFRFICTLFVLLCFTNCIVFAKEKTTITCL-------SEDDAYSRAELLFQKKKYNA 63 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + F + A K+ LM + Y AG+Y +A+ + + +I +P + + VYY Sbjct: 64 AAKQFFDIFVQHLGSNTATKAELMRGYSLYLAGQYSEASEVLDNFIRLHPVHQKIADVYY 123 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 L ++ + + D + ++++++ S + A+ + V LA +++ Sbjct: 124 LKALAEYKQAHN-QQDLEQLLHARLELQQVIDKFPKSDFAIKAKEKINVISKNLAGSQID 182 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 IG++YL + +AA+ RF V+ YS + EA+ R+ ++Y L E +E ++++ Sbjct: 183 IGKFYLNKKNPIAALNRFNTVVDKYSHTSYYPEAIYRIAQSYALLGRKQEMKEQLAILNS 242 Query: 256 RYPQGYWARYVETLVK 271 ++P W++ +L++ Sbjct: 243 KFPNSTWSKRASSLLQ 258 >gi|254361950|ref|ZP_04978081.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica PHL213] gi|153093497|gb|EDN74477.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica PHL213] Length = 259 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 59/248 (23%), Positives = 112/248 (45%), Gaps = 18/248 (7%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + KF +A F+ G + + +++Y K +L++ +++ A Sbjct: 1 MRKFKSLATLVLAGLFVAGCSNSNKE-------LEQSNVQDLYGKGQTYLQDGDYNSAIR 53 Query: 79 YFNQCSRDF-PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 Y ++G+ ++ L + QY G+Y +A E + YP + N+DYV+YL Sbjct: 54 YLEAVGTKGGQYSGLGEQTQLSLIYAQYKVGEYYKALDAAERFARSYPNAANMDYVFYLA 113 Query: 138 GMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 G+S A++ + D + IV+RY S Y + A+ ++ N Sbjct: 114 GLSNARLSDNFIQDFFGVNRASRAVDNVRNAYGNFQTIVQRYPQSQYAQDAQNWMNYLFN 173 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 +LA E+ + ++Y +R YVA + R + +L Y + ++A+ L EAY + + D + Sbjct: 174 RLAEHELAVVKFYDERNAYVAVVNRIEEMLRFYPNTLATKQALPYLKEAYKQMNIPDAEQ 233 Query: 248 EVVSLIQE 255 + LIQE Sbjct: 234 KTELLIQE 241 >gi|222475440|ref|YP_002563857.1| hypothetical protein AMF_769 [Anaplasma marginale str. Florida] gi|255003426|ref|ZP_05278390.1| hypothetical protein AmarPR_04180 [Anaplasma marginale str. Puerto Rico] gi|255004546|ref|ZP_05279347.1| hypothetical protein AmarV_04500 [Anaplasma marginale str. Virginia] gi|222419578|gb|ACM49601.1| Conserved hypothetical protein [Anaplasma marginale str. Florida] Length = 309 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 3/213 (1%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++YE + E + KA F++ +PF+ +A L++A Y G Y ++ASL Sbjct: 53 HKLYEDGLRLFHEGRYKKAIAVFDKIEALYPFSQMAIDGSLVAAVAHYELGNYAESASLA 112 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E YI YP SK++DY YY+ ++ I D+ DQ + V + NS ++ Sbjct: 113 EGYIDSYPSSKSIDYAYYVRILAKYMQIPDLGLDQGVALEVRNLAYEFVRMFPNSRHLGE 172 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 + + LAA+E IG++YLKRG ++AA+ RF+ +++ Y + + E + RLVEAY Sbjct: 173 ISKRLAAVQQHLAAREFMIGKFYLKRGGHIAAVKRFRALISAYPSSAYTNEGLYRLVEAY 232 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLV 270 AL A +S + E W E L+ Sbjct: 233 TALGDHKSAAAYLSKLDE---GNVWRARAERLL 262 >gi|194323821|ref|ZP_03057597.1| tetratricopeptide repeat domain protein [Francisella tularensis subsp. novicida FTE] gi|208779912|ref|ZP_03247256.1| tetratricopeptide repeat domain protein [Francisella novicida FTG] gi|194322185|gb|EDX19667.1| tetratricopeptide repeat domain protein [Francisella tularensis subsp. novicida FTE] gi|208744367|gb|EDZ90667.1| tetratricopeptide repeat domain protein [Francisella novicida FTG] Length = 262 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 57/241 (23%), Positives = 105/241 (43%), Gaps = 10/241 (4%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 L+ +D L V +Y KA ++ Q + A + +PF +A Sbjct: 2 LLLLSSCGPKKDSELPQVYTGYTASFIYAKAHEQMQNQKYFDAIRSYKSLVAQYPFTPLA 61 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---- 149 K ++ +V Y + A +LG+++I YP S YVYY++G+ + R + Sbjct: 62 EKGMVDLIYVYYMDDESTMALALGQQFIKMYPYSIYKGYVYYMIGVVGFEDGRGMLQTYA 121 Query: 150 ------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 +D + + ++ N +V A+ + N +A +I +Y KR Sbjct: 122 PYDMNYHDPTGYQDAYTNFEKAIQLDPNGSFVPDAKRRMVFINNIIARHYDDIAHFYFKR 181 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 G Y AAI R V+ NY + E+A+ + AY L L D+A+ + ++++ YP+ + Sbjct: 182 GAYNAAIDRASQVIRNYPQSTSTEDALVLTIRAYNKLGLYDQAKANIRVLKKNYPKNKFI 241 Query: 264 R 264 + Sbjct: 242 K 242 >gi|254995247|ref|ZP_05277437.1| hypothetical protein AmarM_04700 [Anaplasma marginale str. Mississippi] Length = 289 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 3/213 (1%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++YE + E + KA F++ +PF+ +A L++A Y G Y ++ASL Sbjct: 53 HKLYEDGLRLFHEGRYKKAIAVFDKIEALYPFSQMAIDGSLVAAVAHYELGNYAESASLA 112 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E YI YP SK++DY YY+ ++ I D+ DQ + V + NS ++ Sbjct: 113 EGYIDSYPSSKSIDYAYYVRILAKYMQIPDLGLDQGVALEVRNLAYEFVRMFPNSRHLGE 172 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 + + LAA+E IG++YLKRG ++AA+ RF+ +++ Y + + E + RLVEAY Sbjct: 173 ISKRLAAVQQHLAAREFMIGKFYLKRGGHIAAVKRFRALISAYPSSAYTNEGLYRLVEAY 232 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLV 270 AL A +S + E W E L+ Sbjct: 233 TALGDHKSAAAYLSKLDE---GNVWRARAERLL 262 >gi|254451800|ref|ZP_05065237.1| DNA uptake lipoprotein [Octadecabacter antarcticus 238] gi|198266206|gb|EDY90476.1| DNA uptake lipoprotein [Octadecabacter antarcticus 238] Length = 207 Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats. Identities = 59/170 (34%), Positives = 93/170 (54%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 AF + Y + + + YI YP + Y YL+ +SY I ++ DQ T LQ Sbjct: 10 AFSYHRDQDYPNSRAAAQHYIDFYPVDDDAAYAQYLLALSYYDQIDEIGRDQGLTFQALQ 69 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 + ++ERY +S Y + + + + LAAKE+EIGRYYLKR + AA+ RF++V+ ++ Sbjct: 70 ALRVVIERYPDSEYARSSVLKFDLAFDHLAAKEMEIGRYYLKRDNFAAAVNRFRIVVEDF 129 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 H EA+ RLVE+Y++L L+DEAR +++ Y W L+ Sbjct: 130 QTTSHTPEALHRLVESYLSLGLLDEARSAGAVLGYNYRSTEWYADSFALL 179 >gi|56417074|ref|YP_154148.1| hypothetical protein AM1010 [Anaplasma marginale str. St. Maries] gi|56388306|gb|AAV86893.1| hypothetical protein AM1010 [Anaplasma marginale str. St. Maries] Length = 308 Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 3/213 (1%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++YE + E + KA F++ +PF+ +A L++A Y G Y ++ASL Sbjct: 53 HKLYEDGLRLFHEGRYKKAIAVFDKIEALYPFSQMAIDGSLVAAVAHYELGNYAESASLA 112 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E YI YP SK++DY YY+ ++ I D+ DQ + V + NS ++ Sbjct: 113 EGYIDSYPSSKSIDYAYYVRILAKYMQIPDLGLDQGVALEVRNLAYEFVRMFPNSRHLGE 172 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 + + LAA+E IG++YLKRG ++AA+ RF+ +++ Y + + E + RLVEAY Sbjct: 173 ISKRLAAVQQHLAAREFMIGKFYLKRGGHIAAVKRFRALISAYPSSAYTNEGLYRLVEAY 232 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLV 270 AL A +S + E W E L+ Sbjct: 233 TALGDHKSAAAYLSKLDE---GNVWRARAERLL 262 >gi|148285105|ref|YP_001249195.1| TPR repeat-containing protein [Orientia tsutsugamushi str. Boryong] gi|146740544|emb|CAM81139.1| tetratricopeptide repeat protein with 1 trp repeats [Orientia tsutsugamushi str. Boryong] Length = 264 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 125/256 (48%), Gaps = 8/256 (3%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 +++F T+F + + + ++ + YL + + Y +A L +++ ++ Sbjct: 11 LLNMFRFICTLFVLLCFTNCIIFAKEKTIITYL-------SEDDAYSRAELLFQKKKYNA 63 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + F + A K+ LM + Y AG+Y +A+ + + +I +P + + VYY Sbjct: 64 AAKQFFDIFVQHLGSNTATKAELMQGYSLYLAGQYSEASEVLDNFIRLHPVHQKIADVYY 123 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 L ++ + + D + ++++++ S + A+ + V LA+ +++ Sbjct: 124 LKALAEYKQAHN-QQDLEQLLHAKLALQQVIDKFPKSDFAVKAKEKINVISKNLASSQID 182 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 IG++YL + +AA+ RF V+ YS + EA+ R+ ++Y L E +E ++++ Sbjct: 183 IGKFYLNKKNPIAALNRFNTVVDKYSHTSYYPEAIYRIAQSYALLGRKQEMKEQLAILNI 242 Query: 256 RYPQGYWARYVETLVK 271 ++P G W++ +L++ Sbjct: 243 KFPNGTWSKRASSLLQ 258 >gi|206890303|ref|YP_002248672.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742241|gb|ACI21298.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 248 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 111/246 (45%), Gaps = 7/246 (2%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 F I +I L +++ + D V ++ E+ + ++ + +A + Sbjct: 5 FKFLIITAIVSLLLSCGGKEAVKKEEFDPVVYLKKADEL-------VSKKEYEEARKLLL 57 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + A + L A + + A + +I YPES Y Y +GM+Y Sbjct: 58 EIKNRESAKEYAPLAQLKIADSYLKEDEPELAITEYRRFIELYPESTYAPYAQYSIGMAY 117 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + I + L ++ + Y PY + RN +A E+ IG++Y Sbjct: 118 FRQIEGPERGAGTAQKALNEFLKLEKMYPRHPYGDILPLRIQKCRNIIAEGELIIGKFYH 177 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 K+G Y AAI RF+ ++ NY D ++ +E + LV++Y L ++D+A++ + L++E++P Sbjct: 178 KKGSYTAAIGRFEGIVKNYPDFKNLDETLYLLVDSYKNLNMLDKAKQYLKLLKEKFPDSQ 237 Query: 262 WARYVE 267 +A+ E Sbjct: 238 FAKKAE 243 >gi|258592923|emb|CBE69232.1| putative Tetratricopeptide TPR_2 precursor [NC10 bacterium 'Dutch sediment'] Length = 304 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 110/251 (43%), Gaps = 4/251 (1%) Query: 13 EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72 + +L A +V G + S + + + +D +E+ +A + Sbjct: 2 RFFMPRLLLVAGCATILFSVSGCAGLDLFSPKQAEVPAGSD----QELMSRAEAAFALKQ 57 Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 + + ++ + +FP + + + L S + ++ ++ + + ++ +P+ + +D Sbjct: 58 YDEGRKHLQRLINNFPESELVPTARLNSGRTYFDEKRFDESRAEYQRFMELFPQHEQLDE 117 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 Y +G+SY + + V DQ T + ++ + NS +V A+ + QL + Sbjct: 118 AQYYIGLSYFRQMEKVDRDQTMTNNAAREFRTLINDFRNSQFVSDAQAKLAECYRQLVQR 177 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E+ +G++Y R Y AAIPRF+ +L Y +++ ++A+ L E+ L A+ Sbjct: 178 ELYVGKFYFHREAYGAAIPRFESILKEYPGSQYDDQALYYLGESLWELEQKVPAKAAFQR 237 Query: 253 IQERYPQGYWA 263 + +P A Sbjct: 238 LIAEFPDSDMA 248 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 36/123 (29%), Gaps = 22/123 (17%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ--------------YSAGKYQQAASLGEE 119 + A F DF + + A + Y A E Sbjct: 141 NNAAREFRTLINDFRNSQFVSDAQAKLAECYRQLVQRELYVGKFYFHREAYGAAIPRFES 200 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + +YP S+ D Y +G S ++ + VP R++ + +S A Sbjct: 201 ILKEYPGSQYDDQALYYLGESLWELEQKVP--------AKAAFQRLIAEFPDSDMAPPAA 252 Query: 180 FYV 182 + Sbjct: 253 KRI 255 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 1/108 (0%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 QRE+Y + + + A F +++P + ++L + + A + Sbjct: 176 QRELYV-GKFYFHREAYGAAIPRFESILKEYPGSQYDDQALYYLGESLWELEQKVPAKAA 234 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + I ++P+S +GM+ Q R L MS Sbjct: 235 FQRLIAEFPDSDMAPPAAKRIGMTLVQGPRSRKPPAGLVGGALDSMSD 282 >gi|118602522|ref|YP_903737.1| putative transmembrane protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567461|gb|ABL02266.1| putative transmembrane protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 253 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 11/244 (4%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L I L G Q + +S+T ++ + +A + KA E F Q Sbjct: 4 LFIILPFLTLLLNGCFWQ--EEAKRESITKGWLPKKFFAQAKEEASSGSTDKAIEIFEQL 61 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P + A +S L A+ Y + Y QA YI YPE + Y YYL G Sbjct: 62 QAAYPGSKYALQSKLEIAYALYKSKDYNQAIDRLNSYIKLYPEHFSTPYAYYLRGAVSQD 121 Query: 144 MIRDV---------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 R D + + Y ++ ++ + Y + A+ ++ + RN L+ E+ Sbjct: 122 KSRSFLDDYLTDSAQRDVNSVRDAFNYYLALIYKFPKTEYAEEAKIHLVILRNILSRHEL 181 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 + YY KRG +AAI R + ++ Y + A+ + Y A++ A++ +++ Sbjct: 182 FVAIYYTKRGANIAAINRTKFIIEKYPNTPSVPAALHLMAYNYDAISANILAKDARRVLK 241 Query: 255 ERYP 258 YP Sbjct: 242 NSYP 245 >gi|301064420|ref|ZP_07204845.1| outer membrane assembly lipoprotein YfiO [delta proteobacterium NaphS2] gi|300441502|gb|EFK05842.1| outer membrane assembly lipoprotein YfiO [delta proteobacterium NaphS2] Length = 240 Score = 198 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 1/222 (0%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 +AVC+L S + + D E+ + + + F+KA E F + + Sbjct: 11 LMLAVCWLFLLSGCSVWNEFF-GPEDEITPAEIMNEGMADFNDGKFTKAIETFQKIKDRY 69 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 P++ A + L A Y G+Y +A E+ +P +KNV YV Y GM Y Sbjct: 70 PYSTFALTAELKMADALYEKGEYDEARDEYAEFEKMHPRNKNVPYVLYRQGMCYFNKSAA 129 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 + DQ T + R+++R+ S Y + AR V +LA E+ +G +Y +G+Y Sbjct: 130 IDRDQSDTFKAREEFERLIKRFRKSDYTEQARRKVRECYIKLAEHELYVGNFYFTKGKYE 189 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A+ R+ ++ +Y D +A+ + + + ++ A E Sbjct: 190 TAMARYLYLIDHYPDVGQYYQALESIKKCKDRIKELNGAEET 231 >gi|303326797|ref|ZP_07357239.1| putative competence protein [Desulfovibrio sp. 3_1_syn3] gi|302862785|gb|EFL85717.1| putative competence protein [Desulfovibrio sp. 3_1_syn3] Length = 243 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 104/253 (41%), Gaps = 12/253 (4%) Query: 19 LYKFALTIF-FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 ++K L F ++++ + G + +E++E A + E+N+ +A Sbjct: 1 MHKKLLRCFVLAVSLFAVSGCGIID----MIYLPPAEDTAQEIFEAANDAMSEKNYVRAV 56 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E +N+ +PF+ + L + +Y+ AA +++ + +P + + YV Y Sbjct: 57 ELYNKLRDTYPFSPYTIDAELSLGDAYFLDEEYELAAETYKDFESLHPRHEAIPYVLYQT 116 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 GMS + R + + Y +R+ + Y +SPY KGA ++ R +A E+ I Sbjct: 117 GMSLMKQFRSIDRATTELQEAYDYFNRLSQMYPDSPYAKGAEEHMHTCRKLMAEHELYIA 176 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYVALALMDEAREVVSLIQER 256 + +Y A R++ ++ N+ D E A + + AY A Sbjct: 177 DVFWHMKKYGPAWRRYEFIMENFKDVPEVAEHAKEKSLAAYHNYREEQAAETREKR---- 232 Query: 257 YPQGYWARYVETL 269 QG W + L Sbjct: 233 --QGSWREWFTWL 243 >gi|332704216|ref|ZP_08424304.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio africanus str. Walvis Bay] gi|332554365|gb|EGJ51409.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio africanus str. Walvis Bay] Length = 243 Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 92/196 (46%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 FF VC L+ Y T E+++ + +++++ A EYF + Sbjct: 6 FFIFTVCALIAASSGCGVIDYFFIPTPEETALELFQAGQEEMAQEDWADAVEYFTKLRDR 65 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 FPF+ ++ L+ A ++ GKY +A +E+ + +P + YV + +GM+ + + Sbjct: 66 FPFSPYTVQAELLLANSHFNDGKYAEALQAYKEFESLHPSDPRIPYVLFQIGMANYKSMG 125 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 + Q +++ R+++ Y +S + A+ ++ + R +LA E+ + +Y + + Sbjct: 126 SIDKPQHQAAEAVEFFRRLIQSYPDSEFAPKAKDHLLLARRRLAEHELFVADFYWRAERF 185 Query: 207 VAAIPRFQLVLANYSD 222 +A R+ V+ Y D Sbjct: 186 GSAWERYSFVVEQYKD 201 >gi|297170256|gb|ADI21293.1| DNA uptake lipoprotein [uncultured gamma proteobacterium HF0010_09F21] Length = 240 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 16/229 (6%) Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 ++ + +Y A + +N++ A E + R +PF A ++ Sbjct: 18 CSSNDKKE------EADTPEVNLYNLAQSRISSRNYTGAAEALFRIERSYPFGVYAEQAR 71 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP-------- 149 +V Y G + + + E++I YP + N+DY Y++ GM+ + Sbjct: 72 ADLIYVHYMTGNFDASYAAAEKFIRLYPRNTNIDYAYFMKGMTGYYADDGLFSDFLTLNL 131 Query: 150 --YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 D K ++ + RY S YV AR + RN +A+ E++ YYLKRG YV Sbjct: 132 AKRDVTGAKKSFADLTEFLIRYPESDYVDEARSRLVFLRNLIASNELDSAEYYLKRGAYV 191 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 AA+ R ++ N + + A+ + EAY L D A +V +L + Sbjct: 192 AALNRATYIIKNMPNTSEKKRALKIMKEAYTKLGYKDYADKVKALEEVN 240 >gi|51244660|ref|YP_064544.1| hypothetical protein DP0808 [Desulfotalea psychrophila LSv54] gi|50875697|emb|CAG35537.1| hypothetical protein DP0808 [Desulfotalea psychrophila LSv54] Length = 265 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 4/218 (1%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSR-DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 L+ FA+ I IA+ L G S D+ + ++ K + + A Sbjct: 11 LHSFAIII---IAMSLLGGCADMKSMFDITYEKPDLEFPANDLIIKGMEDYNVGKYFGAI 67 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 YF + +PF+ A + L +A Y KY +A + +++ ++P ++ + YV Y Sbjct: 68 SYFQEILEKYPFSPEAPLAELKAADCNYYMDKYPEALAQYQDFEDRHPTNEAIPYVMYQK 127 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 GMS + I + D + + + S+++ + NSPY AR + + LA E + Sbjct: 128 GMSNYKQIDRIDRDPIVARRAVDFFSQLLRAFPNSPYTTNARKNIAEAISFLADHEFAVI 187 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 +YL+ +Y A R + ++ Y + +A L E Sbjct: 188 EFYLRTEKYEQAETRLEYLITAYPNTNVIPKAEKILAE 225 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 57/182 (31%), Gaps = 32/182 (17%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y+ GKY A S +E + +YP S M + L Sbjct: 58 YNVGKYFGAISYFQEILEKYPFSPEAPLAELKAADCNYYMDKYP--------EALAQYQD 109 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA--AIPRFQLVLANYSD 222 +R+ + A YV + K+++ R VA A+ F +L + + Sbjct: 110 FEDRHPTNE----AIPYVMYQKGMSNYKQIDRID----RDPIVARRAVDFFSQLLRAFPN 161 Query: 223 AEHAEEAMARLVEA--------------YVALALMDEAREVVSLIQERYPQGYWARYVET 268 + + A + EA Y+ ++A + + YP E Sbjct: 162 SPYTTNARKNIAEAISFLADHEFAVIEFYLRTEKYEQAETRLEYLITAYPNTNVIPKAEK 221 Query: 269 LV 270 ++ Sbjct: 222 IL 223 >gi|220904471|ref|YP_002479783.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868770|gb|ACL49105.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 243 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 105/251 (41%), Gaps = 11/251 (4%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 K +I +++ G + +E++E A + E+N+ +A E Sbjct: 3 KKLLRSILLVMSMLMASGCGIID----MIYLPPAEDTAQEIFEAANDAMSEKNYVRAVEL 58 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 +N+ +PF+ + L + +Y+ A+ +++ + +P + + YV Y GM Sbjct: 59 YNKLRDTYPFSPYTIDAELSLGDAYFLDEEYELASESYKDFESLHPRHEAIPYVLYQTGM 118 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S + R + + Y +R+ + Y +SPY KGA ++ R +A E+ I Sbjct: 119 SLLKQFRSIDRATTELQEAYDYFNRLHQMYPDSPYAKGAEEHMITCRKLMAEHELYIADV 178 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYVALALMDEAREVVSLIQERYP 258 + +Y A R++ ++ N+ D E A + + AY ++A+E Sbjct: 179 FWHMKKYGPAWHRYEFIVKNFQDVPEVAEHAKEKSLAAYHYYK-EEQAKETRQK-----R 232 Query: 259 QGYWARYVETL 269 QG W + + L Sbjct: 233 QGSWREWFKWL 243 >gi|297180550|gb|ADI16762.1| DNA uptake lipoprotein [uncultured gamma proteobacterium HF0010_11B23] Length = 224 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 17/231 (7%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G D V ++Y A + QN+ A + + R +PF A + Sbjct: 1 MGCASNEKEDAEPPEV-------QLYRLAQDRISAQNYLGAVDSLVRIERFYPFGVYAEQ 53 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV------- 148 + + Y +G Y QA + E++I YP + NVDY Y++ GM+ + Sbjct: 54 ARADLIYAHYMSGDYDQAYAASEKFIRLYPRNTNVDYAYFMKGMTGYYADEGLLGNLFSL 113 Query: 149 ---PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 D ++ + RY S Y+ AR + RN +A+ E++ YY+KRG Sbjct: 114 SLAKRDIGGAMQSYADLTEFLIRYPESEYIDAARERLIFLRNLIASSELDGAEYYMKRGA 173 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 Y+AA+ R VL N ++ + A+ + ++++ L + A +V S+ Sbjct: 174 YLAALNRANYVLKNIPNSTETQRALDIMKKSFIELGYEEYAEKVSSVEALN 224 >gi|297180915|gb|ADI17119.1| DNA uptake lipoprotein [uncultured gamma proteobacterium HF0070_03O15] gi|297181509|gb|ADI17696.1| DNA uptake lipoprotein [uncultured gamma proteobacterium HF0130_23I23] Length = 238 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 10/202 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y+++ + +NF A E ++ R +PF A ++ + Y +G Y A + E+ Sbjct: 33 LYKQSQDRINAKNFIGAVESLSRIERFYPFGVYAEQARADLIYAFYMSGDYDNAYASSEK 92 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERY 169 +I YP + N+DY Y++ GM+ + D ++ + RY Sbjct: 93 FIRLYPRNTNIDYAYFMRGMTGYYEDDGLLSSVFSLDLSKRDVSTAMKSYADLTEFMIRY 152 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 S YV AR + RN +A+ E++ YYLKRG Y+ A+ R VL N D+ + A Sbjct: 153 PESEYVDVARERLIFLRNLIASSELDGAEYYLKRGAYLGALNRANYVLKNIPDSSEKDRA 212 Query: 230 MARLVEAYVALALMDEAREVVS 251 + + EAY L + A E+V+ Sbjct: 213 LRIMKEAYEKLGYDEYAEEIVA 234 >gi|71082726|ref|YP_265445.1| putative competence lipoprotein ComL [Candidatus Pelagibacter ubique HTCC1062] gi|71061839|gb|AAZ20842.1| putative competence lipoprotein ComL [Candidatus Pelagibacter ubique HTCC1062] Length = 282 Score = 194 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 63/236 (26%), Positives = 116/236 (49%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 F+ ++ + + V + Y++ L+ + A + FN+ FP + Sbjct: 15 TFIWSCGDKTKKISEIVEVDMEMQMSDAYKEGYFELQRGDVLLAAKKFNEAELLFPQSPW 74 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A KS +M+A+ Y+ Y A E Y+ YP K+ Y ++L+GMS+ + I D D Sbjct: 75 AAKSAIMAAYAYYTQYYYSDAIFELERYLVTYPNHKDKVYAHFLLGMSFYEQIVDEKKDL 134 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 ++ + I+ Y ++ + A+F + + LAAKE+ I RYYLK+ +++ A+ R Sbjct: 135 KSILDSKEQFETIIRDYPSTEFAMDAKFKIDLINEILAAKEMYIARYYLKKTKWIPALNR 194 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 F+ V+ +Y+ + EEA+ RLVE L L++E+++ S + Y W + Sbjct: 195 FKTVVKDYNTTIYTEEALHRLVEINYRLGLINESKKYASTLGYNYQSSDWYKNSYK 250 >gi|317485235|ref|ZP_07944116.1| outer membrane assembly lipoprotein YfiO [Bilophila wadsworthia 3_1_6] gi|316923526|gb|EFV44731.1| outer membrane assembly lipoprotein YfiO [Bilophila wadsworthia 3_1_6] Length = 240 Score = 194 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 7/220 (3%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +E+YE A ++E+N+S+A +Y+ + +FPF+ ++ L + GKY Sbjct: 27 PPPEDTAQELYEGANDAMQEKNYSQAAQYYTKLKDNFPFSPYTVEAELSLGDAFFLDGKY 86 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +AA +E+ + +P + + YV Y VGMS + V +T+ L++ R+ E Y Sbjct: 87 PEAAEAYKEFESLHPRHEAIPYVLYQVGMSNLKSFISVDRPTTSTQEALEFFGRLRETYP 146 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA-EEA 229 NS Y + + + R LA E+ +G + Y A R+ ++ N+ D A Sbjct: 147 NSEYAQKSVEEMKNCRRLLAEHELYLGDVFWNMNNYGPAWRRYTYIVDNFPDVPEVSAHA 206 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 + + AY RE S QG W R+ + L Sbjct: 207 KEKALSAYYR------YREQQSQKAREQIQGSWKRWFDWL 240 >gi|88606744|ref|YP_505635.1| putative competence lipoprotein ComL [Anaplasma phagocytophilum HZ] gi|88597807|gb|ABD43277.1| putative competence lipoprotein ComL [Anaplasma phagocytophilum HZ] Length = 233 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 113/212 (53%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S V+ D D +Y++A + +++ + A N+ +PF+ VA LMSA Sbjct: 18 SGSVHADEAIDEGGVHGLYDRASVLFEKKKYKDAIAILNKIEALYPFSQVAIDGSLMSAE 77 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y G Y++AA+L E YI YP S +DY YY+ S ++ D+ D K +L+Y Sbjct: 78 ANYELGNYREAATLVEGYIGIYPNSPVIDYAYYIRIASKYMLVPDLGLDDSIAKEVLEYA 137 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + V+ + S Y+ + + RN +AAKE GR+Y+KRGEY+AAI RF ++ Y D Sbjct: 138 AEFVKMFPESEYLAPVQEKLGHLRNHVAAKEFLTGRFYMKRGEYIAAIKRFSTLVREYPD 197 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 + + +E M RL EAY A+ D A +++ Sbjct: 198 SAYFQEGMYRLSEAYSAIGDKDTASVYTNMLA 229 >gi|78485715|ref|YP_391640.1| competence lipoprotein ComL [Thiomicrospira crunogena XCL-2] gi|78364001|gb|ABB41966.1| conserved hypothetical protein [Thiomicrospira crunogena XCL-2] Length = 256 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 9/221 (4%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 ++ ++ Y A + + + A Y+ + +P+ A +S L A+ Y Sbjct: 22 VEKDESEWTVKDFYSHAKDAFESEQWESAIGYYEKLKAYYPYGKYAEQSYLELAYAYYRY 81 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMS---------YAQMIRDVPYDQRATKLM 158 + + A EE+I YP+ + Y YYL ++ + + D +T Sbjct: 82 DEPESAQRELEEFIRLYPKHAELAYAYYLRALAADSINKSWLDSWLTDPAMRDMASTTKA 141 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 Q ++ R+ NS Y +R + V RN+LA E ++ YY KR Y+AA R + ++ Sbjct: 142 YQAYIDLLNRFPNSKYAAKSRERLIVLRNRLARHEYQVAEYYFKRQAYLAAANRAKQIIE 201 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +Y + +A+ + EAY L + A V S+I Q Sbjct: 202 SYPRSMVNMKALGLMKEAYAKLGMTQNADNVQSVIDLNTQQ 242 >gi|323697686|ref|ZP_08109598.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio sp. ND132] gi|323457618|gb|EGB13483.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio desulfuricans ND132] Length = 242 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 60/248 (24%), Positives = 107/248 (43%), Gaps = 11/248 (4%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + L + + L G S +E+YE V + E+++ A +YF Sbjct: 2 RRLLAPVLIVVLLSLAGCMWIDS----YFLPPPEDTAQELYEAGVAAMDEKDYGDAQDYF 57 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 ++ FPF+ + K L + Y A +E+ +P ++N+ YV Y + + Sbjct: 58 SKLKDRFPFSPYSLKGELALGDAYFLDEDYVHALDAYKEFEALHPSNENIPYVLYQIANT 117 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 M R + Q K L+Y+ R+VE Y S Y + A+ + R LA EV + ++ Sbjct: 118 DVSMFRTIDRRQENVKEGLEYLYRLVETYPKSQYAEAAKEMILKSRRILAEHEVFVADFF 177 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + +Y A R+Q V+ N+SD + AM R +Y E ++ +S + Q Sbjct: 178 WRTEQYGPAWHRYQYVVENFSDIPDLRDYAMKRAEYSYF------EYQKTLSEEERERIQ 231 Query: 260 GYWARYVE 267 G W +++ Sbjct: 232 GSWKLWLK 239 Score = 35.9 bits (82), Expect = 6.3, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 49/128 (38%), Gaps = 22/128 (17%) Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D++ Y S++ +R+ SPY E+ +G Y +YV A+ Sbjct: 46 DEKDYGDAQDYFSKLKDRFPFSPYSLKG--------------ELALGDAYFLDEDYVHAL 91 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVAL--------ALMDEAREVVSLIQERYPQGYW 262 ++ A + E+ + ++ V++ + E E + + E YP+ + Sbjct: 92 DAYKEFEALHPSNENIPYVLYQIANTDVSMFRTIDRRQENVKEGLEYLYRLVETYPKSQY 151 Query: 263 ARYVETLV 270 A + ++ Sbjct: 152 AEAAKEMI 159 >gi|46580246|ref|YP_011054.1| competence protein [Desulfovibrio vulgaris str. Hildenborough] gi|46449663|gb|AAS96313.1| competence protein, putative [Desulfovibrio vulgaris str. Hildenborough] Length = 260 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 63/270 (23%), Positives = 110/270 (40%), Gaps = 28/270 (10%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 M L RA C+ + F ++ C ++ Y +E+ Sbjct: 18 MRKTLLRAACMA------------ALTFMLSGCGII---------DYFYLPPPEDTAQEL 56 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE ++E+++ A + + + ++PF+ ++ L A + +Y AA +E+ Sbjct: 57 YESGNDAMREKDYVAAAQAYTRLKDNYPFSPYTIEAELSLADAYFLDEEYPAAAEAYKEF 116 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 T +P + + YV Y VGM+ + V + QY R+ E Y + Y A Sbjct: 117 ETLHPRHQAIPYVLYQVGMARLKSFISVDRPVNNVQEAYQYFQRLRESYPGTEYAAKAEE 176 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYVA 239 ++ R LA +E+ I Y + G+Y AA R+ V N+ D HA E A + AY+ Sbjct: 177 HMKECRRLLAERELFIADVYWRTGKYGAAWQRYSFVRDNFKDVPHAVEYATEKANVAYLR 236 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 RE S +G W ++ + L Sbjct: 237 ------HREAQSENIREAREGSWKQWFKWL 260 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q +R+ + Y SPY A E+ + Y EY AA ++ Sbjct: 71 AAAQAYTRLKDNYPFSPYTIEA--------------ELSLADAYFLDEEYPAAAEAYKEF 116 Query: 217 LANYSDAEHAEEAMARLVEAYVA--------LALMDEAREVVSLIQERYPQGYWARYVET 268 + + + ++ A + + + EA + ++E YP +A E Sbjct: 117 ETLHPRHQAIPYVLYQVGMARLKSFISVDRPVNNVQEAYQYFQRLRESYPGTEYAAKAEE 176 Query: 269 LVK 271 +K Sbjct: 177 HMK 179 >gi|58584928|ref|YP_198501.1| DNA uptake lipoprotein [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419244|gb|AAW71259.1| DNA uptake lipoprotein [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 237 Score = 191 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 71/242 (29%), Positives = 121/242 (50%), Gaps = 9/242 (3%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +YK +T F + F + D V + + E+YE+AV ++ + +A Sbjct: 1 MYKALITCFIFLVCSFTRSYAS--------DDVHLEKSETELYEEAVELFDQKKYKQAIR 52 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F + +PF+ A K+ L+S Y+ Y AAS ++YI YP +++ YVYYL Sbjct: 53 AFRKIEDLYPFSYWAMKAKLLSGISHYNMDDYSSAASDMDDYIYIYPNGEDLPYVYYLRV 112 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY I V Q+ L+ + V ++ S Y++ + V + + + KE IG+ Sbjct: 113 LSYYMQINRVQLGQQTAYKALELAAEYVNLFSESEYIEEMKEKVRLITDHILKKEYSIGK 172 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 +Y +RGEY+AAI RFQ ++++ D + ++ L+ AY AL L EA + SL+ E Sbjct: 173 FYFRRGEYLAAIKRFQNIISS-KDYSYFPRSINYLIAAYSALGLDLEAGQYESLLAENLK 231 Query: 259 QG 260 + Sbjct: 232 EN 233 >gi|212702987|ref|ZP_03311115.1| hypothetical protein DESPIG_01025 [Desulfovibrio piger ATCC 29098] gi|212673575|gb|EEB34058.1| hypothetical protein DESPIG_01025 [Desulfovibrio piger ATCC 29098] Length = 243 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 98/251 (39%), Gaps = 9/251 (3%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + ++ ++A+ L G + +E++E + E+N+ +A E Sbjct: 2 FKNYLRSLTLALAIFSLSGCGIID----MIYLPPAEDTAQEIFEAGNDAMSEKNYVRAVE 57 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +N+ +PF+ + L A Y +Y AA +++ + +P + YV Y G Sbjct: 58 LYNKLRDTYPFSPYTVDAELALADAYYLDEEYVLAAETYKDFESLHPRHEATPYVIYQTG 117 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 MS + R + + +Y +R+ + Y +SPY K A + R +A E+ I Sbjct: 118 MSLMKQFRSIDRATTILQEAHEYFARLRQVYPDSPYAKDAEEKMHTCRRLMAEHELYIAD 177 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 + +Y A R++ V + D A ++ LA +E + Sbjct: 178 VFWHMEKYGPAWRRYEYVSETFPDVPEV--ASHAKEKS---LAAYHNYKEEQGRLTREKR 232 Query: 259 QGYWARYVETL 269 QG W + L Sbjct: 233 QGSWRNWFTWL 243 >gi|255020043|ref|ZP_05292116.1| Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Acidithiobacillus caldus ATCC 51756] gi|254970572|gb|EET28061.1| Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) [Acidithiobacillus caldus ATCC 51756] Length = 209 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 47/204 (23%), Positives = 90/204 (44%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 + ++ +A F ++P+ A ++ L +A+ Y G + A + + +I +P + Sbjct: 1 MDSGDYDRAIRDFQNLQAEYPYGPYAEQAQLDTAYAYYKQGDSKAAVAAADAFIKAHPVN 60 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 +VDY +YL G++ Q I +D R LQ + + Y S Y AR ++ + Sbjct: 61 PHVDYAWYLKGLAQYQAIEGAEFDPRPDYQALQTFRYVAKTYPKSAYALSARLHIAKIID 120 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 L + + I ++Y R +VAA R V+ +Y + A+ L +Y L L+ AR Sbjct: 121 ILGERNLRICKFYYVRHAFVAAANRCVRVIRDYQLSPARNMALYYLARSYRRLDLLGLAR 180 Query: 248 EVVSLIQERYPQGYWARYVETLVK 271 ++ P + + L + Sbjct: 181 TTAIILHHNAPTAPETKKLRALWQ 204 >gi|86159785|ref|YP_466570.1| hypothetical protein Adeh_3366 [Anaeromyxobacter dehalogenans 2CP-C] gi|85776296|gb|ABC83133.1| tetratricopeptide repeat protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 262 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 56/224 (25%), Positives = 106/224 (47%), Gaps = 8/224 (3%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + E Y+ + LK NF++A ++F +PF+ A S L A V++ +Y +AA Sbjct: 35 KTPEENYQAGMDELKADNFTEAVKFFEFVKTKYPFSKFAALSELRLADVKFKQDRYLEAA 94 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD--------VPYDQRATKLMLQYMSRIV 166 ++++ +P ++VDY Y G+SY + DQR + +Q ++ V Sbjct: 95 EAYKQFVQLHPTHEDVDYAEYRSGLSYFKDAPGEFALFPPAAEKDQRQAEKAVQVLTDFV 154 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + T S Y+ A+ + + +LAA+E + YY KR + A R++ ++ Y + H Sbjct: 155 QTRTQSKYLPDAKKVLGEAQTRLAAREWYVAEYYFKRSLWAGAAGRYETLVDRYPGSRHE 214 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 EA+ +L A + + AR+ + + ++P E L+ Sbjct: 215 PEALWKLASACLKMDEKHRARKALQQLIVKHPGDARRAEAEKLL 258 >gi|118581055|ref|YP_902305.1| hypothetical protein Ppro_2643 [Pelobacter propionicus DSM 2379] gi|118503765|gb|ABL00248.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM 2379] Length = 246 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 100/244 (40%), Gaps = 9/244 (3%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + +F ++ L+ Q ++ L+ TD E+Y ++ + A Sbjct: 1 MKMGFRAVFAALCTLTLL----QGCAELKLNKPTD-----ELYRDGEASFQKGKYEDAVI 51 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + + FP ++ + + A + Y +AA+ E + +P + + Y Y G Sbjct: 52 QWRRVKESFPPPELSARVEINIADAYFLNKDYIEAAAEYENFRKLHPNHELMGYALYGQG 111 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +S + I+ + DQ K L + Y + + + R++ E+ +G+ Sbjct: 112 LSNFKQIKGIDTDQTPVKNALSLFESYTKLYPGGANLPDVQARIVDCRDKQLQYELYVGK 171 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 +YL+ G Y AAI RF+ L + D ++E + L AYV + +EV + + + + Sbjct: 172 FYLRTGSYPAAIARFEEALKGFGDLPRSDETLFYLGSAYVENGQKPKGQEVYTRLLKEHA 231 Query: 259 QGYW 262 + Sbjct: 232 TSSF 235 >gi|220918604|ref|YP_002493908.1| outer membrane assembly lipoprotein YfiO [Anaeromyxobacter dehalogenans 2CP-1] gi|219956458|gb|ACL66842.1| outer membrane assembly lipoprotein YfiO [Anaeromyxobacter dehalogenans 2CP-1] Length = 262 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 8/224 (3%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + E Y+ + LK NF++A ++F +PF+ A S L A V++ +Y +AA Sbjct: 35 KTPEENYQAGMDELKADNFTEAVKFFEFVKTKYPFSKFAALSELRLADVKFKQDRYLEAA 94 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD--------VPYDQRATKLMLQYMSRIV 166 ++++ +P ++VDY Y G++Y + DQR + +Q ++ V Sbjct: 95 EAYKQFVQLHPTHEDVDYAEYRSGLAYFKDAPGDFALFPPASEKDQRQAEKAVQVLTDFV 154 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + T S Y+ A+ + + +LAA+E + YY KR + A R++ ++ Y + H Sbjct: 155 QTRTQSKYLADAKKVLAEAQTRLAAREWYVAEYYYKRSRWAGAAGRYETLVDKYPGSTHE 214 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 EA+ +L A + + AR+ + + ++P E L+ Sbjct: 215 PEALWKLASACLKMDEKHRARKALQTLIVKHPGDARRAEAEKLL 258 >gi|224368344|ref|YP_002602507.1| putative DNA uptake lipoprotein [Desulfobacterium autotrophicum HRM2] gi|223691060|gb|ACN14343.1| putative DNA uptake lipoprotein [Desulfobacterium autotrophicum HRM2] Length = 201 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 82/181 (45%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + + + ++Q++ A + F +PF+ A + L A + +Y +A Sbjct: 2 EKSAETLVREGSAQFRDQDYKYAIKSFTTLKDWYPFSKYAILAELKIADAHFQLEEYDEA 61 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 +E+ +P+++ + YV Y G + I V DQR +R+V R+ ++P Sbjct: 62 IFAYQEFENLHPKNEAIPYVIYQTGRCWFDRIDTVDRDQRCALKAQTEFNRLVHRFPDAP 121 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 A ++ V LA E+ + +Y K Y AA+ RF+ + ANY D +EA+ R+ Sbjct: 122 ESAKAAQHIEVCIKSLAGHELYVAEFYFKAKHYKAAMKRFEHLFANYPDTREGKEALPRI 181 Query: 234 V 234 Sbjct: 182 A 182 >gi|120602370|ref|YP_966770.1| lipoprotein [Desulfovibrio vulgaris DP4] gi|120562599|gb|ABM28343.1| putative lipoprotein [Desulfovibrio vulgaris DP4] gi|311233769|gb|ADP86623.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio vulgaris RCH1] Length = 243 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 63/270 (23%), Positives = 110/270 (40%), Gaps = 28/270 (10%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 M L RA C+ + F ++ C ++ Y +E+ Sbjct: 1 MRKTLLRAACMA------------ALTFMLSGCGII---------DYFYLPPPEDTAQEL 39 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE ++E+++ A + + + ++PF+ ++ L A + +Y AA +E+ Sbjct: 40 YESGNDAMREKDYVAAAQAYTRLKDNYPFSPYTIEAELSLADAYFLDEEYPAAAEAYKEF 99 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 T +P + + YV Y VGM+ + V + QY R+ E Y + Y A Sbjct: 100 ETLHPRHQAIPYVLYQVGMARLKSFISVDRPVNNVQEAYQYFQRLRESYPGTEYAAKAEE 159 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYVA 239 ++ R LA +E+ I Y + G+Y AA R+ V N+ D HA E A + AY+ Sbjct: 160 HMKECRRLLAERELFIADVYWRTGKYGAAWQRYSFVRDNFKDVPHAVEYATEKANVAYLR 219 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 RE S +G W ++ + L Sbjct: 220 ------HREAQSENIREAREGSWKQWFKWL 243 Score = 39.3 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q +R+ + Y SPY A E+ + Y EY AA ++ Sbjct: 54 AAAQAYTRLKDNYPFSPYTIEA--------------ELSLADAYFLDEEYPAAAEAYKEF 99 Query: 217 LANYSDAEHAEEAMARLVEAYVA--------LALMDEAREVVSLIQERYPQGYWARYVET 268 + + + ++ A + + + EA + ++E YP +A E Sbjct: 100 ETLHPRHQAIPYVLYQVGMARLKSFISVDRPVNNVQEAYQYFQRLRESYPGTEYAAKAEE 159 Query: 269 LVK 271 +K Sbjct: 160 HMK 162 >gi|258406026|ref|YP_003198768.1| outer membrane assembly lipoprotein YfiO [Desulfohalobium retbaense DSM 5692] gi|257798253|gb|ACV69190.1| outer membrane assembly lipoprotein YfiO [Desulfohalobium retbaense DSM 5692] Length = 244 Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 101/234 (43%), Gaps = 8/234 (3%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + D + + +E+ E + E+++ A EYF + +PF+ + Sbjct: 18 GSMGCGTVDYFFLKPPE-DTAQELAEAGRAAMAEKDYDAAIEYFTKLKERYPFSPYTPDA 76 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L + +Y+ A +E+ + +P K + +V + +G++ + + Q + Sbjct: 77 ELALGDAYFLDEQYKAAVDTYKEFESLHPRHKAIPHVLFQIGLANFKQFDSIDRPQTNME 136 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 LQY R+ + + +PY + A Y+T R A E+ + +Y +R ++ AA R+ V Sbjct: 137 EALQYFRRVQQGFPETPYAEKAGDYITQCRRYQAEHELFVADFYWRREDFGAAWKRYAYV 196 Query: 217 LANYSDAEHAEE-AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 +++ ++ A R AY+ ++ S + QG W ++ + L Sbjct: 197 AEEFAELPKIQDYARDRQEIAYLR------YQQHRSQTKREEEQGSWKQWFDWL 244 >gi|197123839|ref|YP_002135790.1| outer membrane assembly lipoprotein YfiO [Anaeromyxobacter sp. K] gi|196173688|gb|ACG74661.1| outer membrane assembly lipoprotein YfiO [Anaeromyxobacter sp. K] Length = 262 Score = 188 bits (479), Expect = 6e-46, Method: Composition-based stats. Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 8/224 (3%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + E Y+ + LK NF++A ++F +PF+ A S L A V++ +Y +AA Sbjct: 35 KTPEENYQAGMDELKADNFTEAVKFFEFVKTKYPFSKFAALSELRLADVKFKQDRYLEAA 94 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD--------VPYDQRATKLMLQYMSRIV 166 ++++ +P ++VDY Y G++Y + DQR + +Q ++ V Sbjct: 95 EAYKQFVQLHPTHEDVDYAEYRSGLAYFKDAPGDFALFPPASEKDQRQAEKAVQVLTDFV 154 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + T S Y+ A+ + + +LAA+E + YY KR + A R++ ++ Y + H Sbjct: 155 QTRTQSKYLADAKKVLAEAQTRLAAREWYVAEYYYKRSRWAGAAGRYETLVDKYPGSAHE 214 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 EA+ +L A + + AR+ + + ++P E L+ Sbjct: 215 PEALWKLASACLKMDEKHRARKALQTLIVKHPGDARRAEAEKLL 258 >gi|242279291|ref|YP_002991420.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio salexigens DSM 2638] gi|242122185|gb|ACS79881.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio salexigens DSM 2638] Length = 243 Score = 188 bits (479), Expect = 6e-46, Method: Composition-based stats. Identities = 56/249 (22%), Positives = 108/249 (43%), Gaps = 16/249 (6%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 A +F S++ C ++ Y +E++E V +K++ + A EYF+ Sbjct: 10 LASFLFISLSGCGVI---------DYYFLPKPEDTAQELFEAGVQAMKDKEYFDATEYFS 60 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + +PF+ K+ + + KY A+ +E+ +P + + YV Y +G+S Sbjct: 61 KLKDRYPFSPYTVKAEISLGDAYFLDKKYFDASEAYKEFAALHPGNDEIPYVLYQIGLSN 120 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + + Q L+Y R+ E Y + Y K A+ Y+ R LA E+ I ++ Sbjct: 121 FNLFSSIDRPQSNITEALEYFYRVEEAYPETQYAKSAKEYIVKCRRALADHELYIADFFW 180 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + ++ +A R+ V+ N+ D + AM + +Y E ++ +S + QG Sbjct: 181 RSSKFGSAWKRYAYVVRNFKDLPEVRKYAMKQAEMSYY------EYQKTLSQEERERLQG 234 Query: 261 YWARYVETL 269 W V+ L Sbjct: 235 SWKELVDWL 243 >gi|317153532|ref|YP_004121580.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio aespoeensis Aspo-2] gi|316943783|gb|ADU62834.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio aespoeensis Aspo-2] Length = 242 Score = 188 bits (479), Expect = 6e-46, Method: Composition-based stats. Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 7/221 (3%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +E+YE + + + + A +YF++ FPF+ A ++ L + Y Sbjct: 28 PPPEDTAQELYEAGMDAMGNKEYGDAQQYFSKLKDRFPFSPFALRAELALGDAYFLDADY 87 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A +E+ +P +++ YV Y +G + + R + Q + L+Y R+ E Y Sbjct: 88 LMALDSYKEFEALHPSHESIPYVLYQIGSADFNLFRSIDRRQENIQEGLEYFYRLRETYP 147 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-A 229 +S Y + +T GR LA EV + ++ + +Y A R+Q V+ N+SD + A Sbjct: 148 DSEYATASEDMITKGRRILAEHEVYVADFFWRTEQYGPAWNRYQYVVENFSDVPDLRDYA 207 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 R +Y E + + QG W +++ + Sbjct: 208 RKRAEYSYFEYQKTLSEEERLRI------QGSWKLWLKKWL 242 >gi|78357108|ref|YP_388557.1| putative lipoprotein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219513|gb|ABB38862.1| putative lipoprotein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 243 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 109/254 (42%), Gaps = 22/254 (8%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + L++ +++ C ++ Y +E++E ++E++++ A +Y Sbjct: 8 FMVMLSLLATLSGCGII---------DYFFLPPPEDTAQELFESGNDAMREKDYASATDY 58 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F++ +FPF+ A ++ L + +Y AA +E+ T +P K + YV + +G Sbjct: 59 FSKLKDNFPFSPYAIEAELSLGDAYFLDEEYAMAAEAYKEFETLHPRHKAIPYVLFQIGN 118 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + + + Q +Y SR+ E Y S Y + A + R +A E+ + + Sbjct: 119 ANLKSFVSIDRPQTNVAEAYEYFSRVRESYPGSEYAQKAGELLGECRRLMAEHELFVADF 178 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAE----HAEEAMARLVEAYVALALMDEAREVVSLIQE 255 Y + G++ +A R+Q V + D E +AEE AY+ A E + Sbjct: 179 YWRTGKFRSAASRYQHVAQEFPDVEDLRAYAEEKGKI---AYLR------ATEEKAQQDR 229 Query: 256 RYPQGYWARYVETL 269 G W ++ E L Sbjct: 230 DRRHGSWKQWFEWL 243 >gi|319760322|ref|YP_004124260.1| putative lipoprotein [Candidatus Blochmannia vafer str. BVAF] gi|318039036|gb|ADV33586.1| putative lipoprotein [Candidatus Blochmannia vafer str. BVAF] Length = 261 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 99/212 (46%), Gaps = 13/212 (6%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++Y+ A L N++++ + + + PF ++ L + Y +Q A + Sbjct: 49 SDLYKSAHDKLLHNNYTESIQKLLRLNNLHPFEPYPQQIYLDLIYAYYKLHDFQSANNFI 108 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRD-------------VPYDQRATKLMLQYMSR 164 + +++ YP KN+DYV Y+ G+ + ++ ++ + S+ Sbjct: 109 QRFLSSYPNHKNLDYVLYMQGLINMNLDKNNSYFAHKYWHKSWFKHNPSYANIAFHSFSK 168 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 I++ + NS Y A + + +N++A E+ I ++Y +R Y++ I R + +L + + Sbjct: 169 IIQNHPNSQYYIDAYKRLIILKNRIANYELAIIKFYDQRNSYISVILRSERMLRYFPNTP 228 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256 EA+ + AY ++L+D++ V +I E Sbjct: 229 ATYEALYYMKRAYQKVSLLDQSNIVNKIISEN 260 >gi|148266018|ref|YP_001232724.1| DNA uptake lipoprotein-like protein [Geobacter uraniireducens Rf4] gi|146399518|gb|ABQ28151.1| DNA uptake lipoprotein-like protein [Geobacter uraniireducens Rf4] Length = 249 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 91/221 (41%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 V V+ +++ F N+ A + + F ++ L A + Y Sbjct: 26 VPVVKTADTYFKEGEEFYASHNYEDAIAQWKKVKETFSSPELSTLVDLKIADAHFDNQSY 85 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +AA+ E++ +P + Y Y +G+ I + DQ K + +++Y Sbjct: 86 IEAAAAYEDFRKLHPNHEKAAYALYRLGLCNYNQISGIDTDQTPVKNAVNLFEAFLKQYP 145 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 S YV + + V + E+ +GR+YL+ +Y AA R + L Y +E +E + Sbjct: 146 KSEYVAEVKDKLDVCIMKQIEYEIYVGRFYLRTEKYAAATKRLEEALLKYPKSEFHDETL 205 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 L +AY + RE +L+ ++Y + + +++ Sbjct: 206 FYLGKAYFLSGDKVKGRETFNLLAKQYASSKYIEEAKQVME 246 >gi|302342571|ref|YP_003807100.1| outer membrane assembly lipoprotein YfiO [Desulfarculus baarsii DSM 2075] gi|301639184|gb|ADK84506.1| outer membrane assembly lipoprotein YfiO [Desulfarculus baarsii DSM 2075] Length = 280 Score = 184 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 98/248 (39%), Gaps = 12/248 (4%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSS--------RDVYLDSVTDVRYQREVYEKAVLF 67 + + + A+ + G + + +A Sbjct: 1 MSKALRLIIAAGMIAALGLVGGCSTVKGWVGNLGFGGGGDGAVEAFDTPAQVLATEAEQA 60 Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 +E N+ +A E F Q FP++ A + L + +Y +A E++I +P++ Sbjct: 61 YQEGNYEEAAETFQQLKDRFPYSKFALLADLRLGDAYFKDERYDEAILAYEDFIRLHPKN 120 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 + V Y Y +GM Y + + D + ++ +++ Y + + A Sbjct: 121 EGVPYAMYQIGMVYHEQMLTPDRDPTFARKAMEAFQKLMREYPKNEWSVKAVPRFQESAA 180 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA---YVALALMD 244 + AA ++ +G++Y G+Y AAI RF+ V+ Y D +EAM+ L A Y L + Sbjct: 181 RAAAHDLAVGKFYYNTGKYPAAIYRFKRVMTQYPDVGLYDEAMSALQRAQADYDE-QLAE 239 Query: 245 EAREVVSL 252 EA E L Sbjct: 240 EAEEYAGL 247 Score = 42.0 bits (98), Expect = 0.077, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 37/122 (30%), Gaps = 22/122 (18%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + + ++ +R+ S + A + G Y K Y AI Sbjct: 64 GNYEEAAETFQQLKDRFPYSKFALLADLRL--------------GDAYFKDERYDEAILA 109 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMD--------EAREVVSLIQERYPQGYWAR 264 ++ + + E AM ++ Y L +A E + YP+ W+ Sbjct: 110 YEDFIRLHPKNEGVPYAMYQIGMVYHEQMLTPDRDPTFARKAMEAFQKLMREYPKNEWSV 169 Query: 265 YV 266 Sbjct: 170 KA 171 >gi|297569607|ref|YP_003690951.1| outer membrane assembly lipoprotein YfiO [Desulfurivibrio alkaliphilus AHT2] gi|296925522|gb|ADH86332.1| outer membrane assembly lipoprotein YfiO [Desulfurivibrio alkaliphilus AHT2] Length = 268 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 18/235 (7%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 V +RD ++ D R + + + + + +A E F +PF+ V Sbjct: 28 VSGCGTKNRDQSPEAEQDPRAPELLAMEGMEKFNQARYRQALEIFKDLKERYPFSSVGVL 87 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + L +A Y +Y +A L +E+ +P ++ + YV + +GM + Q I + D Sbjct: 88 AELKAADATYYLRRYDEALPLYQEFENNHPTNEAIPYVMFQIGMCHYQRIGTIDRDPAHA 147 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + +R+ + +SPY K A R+ +A E+ I +YL +Y A R Sbjct: 148 LNAIAAFTRLNRAFPDSPYRKEAEARTMAARDFMARHEMFIAGFYLNTKKYDQAERRLAY 207 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE-RYPQGYWARYVETL 269 ++ NY ++E EA EV++ ++ P+ W +V L Sbjct: 208 LIDNYPESELIPEA-----------------EEVLAALEAGNPPRRNWRDFVPDL 245 >gi|94265668|ref|ZP_01289408.1| putative lipoprotein [delta proteobacterium MLMS-1] gi|93453795|gb|EAT04164.1| putative lipoprotein [delta proteobacterium MLMS-1] Length = 272 Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 3/195 (1%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 + C LV Q+ ++ D + + + N+ KA + F++ +P Sbjct: 25 TAGGCALV---EQTRTLLFGDRDRGAYTPEHLALDGLEEMNRGNYRKALKLFDEIKERYP 81 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 F+ V + L +A + Y++A L +E+ +P ++ + YV + +GMS+ + I + Sbjct: 82 FSSVGPLAELKAADANFHLRNYREAHLLYQEFENNHPTNEAMPYVLFQMGMSHYRRIDTI 141 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D + SR+ Y +SPY + A + R+ LA E+ + +Y+K EY Sbjct: 142 DRDPAHAINAVAAFSRLNRAYPDSPYREEAEARLLAARDFLARHEMFVATFYVKTKEYQQ 201 Query: 209 AIPRFQLVLANYSDA 223 A R +L Y ++ Sbjct: 202 AEGRLNHLLETYPES 216 >gi|116749145|ref|YP_845832.1| ComL family lipoprotein [Syntrophobacter fumaroxidans MPOB] gi|116698209|gb|ABK17397.1| lipoprotein, ComL family [Syntrophobacter fumaroxidans MPOB] Length = 258 Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 91/215 (42%), Gaps = 7/215 (3%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLD-------SVTDVRYQREVYEKAVLFL 68 ++Y+FA + V G + D S T + ++ + + + Sbjct: 8 IRKVYRFAAFVPLLSLVLVTGGCGTFLGEFYFGDLLGGKKSSSTVDKTAEQLAVEGMQKM 67 Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 +++++ A + F + +P++ A + L + KY +AA EE+ +P ++ Sbjct: 68 QKKDYDDALKAFRKLKEHYPYSKYAILAELKIGDALFHDKKYSEAAIAYEEFARLHPRNE 127 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 V YV Y +GMS+ D T+ ++ R+V+ + S Y + A+ + + + Sbjct: 128 VVPYVLYQIGMSHFLTFTTTDRDPEETQAAIEAFQRVVQMFPQSDYARRAQKQLFECQKR 187 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 AA E + Y + GEY A R + + YS A Sbjct: 188 AAAHEFNVASLYYRMGEYFATRARLRTINEKYSTA 222 >gi|298504630|gb|ADI83353.1| outer membrane protein assembly lipoprotein YfiO, putative [Geobacter sulfurreducens KN400] Length = 254 Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 88/252 (34%), Gaps = 10/252 (3%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 LY L +A C L R + +A F + F A Sbjct: 9 LYPTLLIPLLFVAGCGLFASST----------APVSRSPESMAREAEEFQSSRRFEDAIA 58 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + + + + + + A Q+ +G Y +AA+ EE+ +P + Y Y G Sbjct: 59 QWRKVKESYISPELITLAEIKIADAQFDSGNYIEAAASYEEFRKLHPNHEKSAYALYRQG 118 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY I DQ + + Y S Y + R + R E+ +G+ Sbjct: 119 LSYFNQIHGFDTDQTPVSNTVTIFESFLRLYPQSEYAEEVRNKLDAARQNQVQYEIYVGQ 178 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 +Y + +Y +AI R + L Y + +E + L +AY+ RE + + Sbjct: 179 FYYRTEKYTSAIKRLEDALKRYPRSPLHDETLYYLGKAYIKAGDKAGGREAFQRLFNEFR 238 Query: 259 QGYWARYVETLV 270 + + + Sbjct: 239 TSKYVDEARSFL 250 >gi|153006273|ref|YP_001380598.1| tetratricopeptide domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152029846|gb|ABS27614.1| Tetratricopeptide domain protein [Anaeromyxobacter sp. Fw109-5] Length = 258 Score = 181 bits (461), Expect = 8e-44, Method: Composition-based stats. Identities = 63/252 (25%), Positives = 109/252 (43%), Gaps = 9/252 (3%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRD 86 A+ V S+ V E YE V LK NFS+A ++F Sbjct: 3 LPAALALCVLLSACGSKRVSFSGQIKYEPTAEANYEAGVDELKHDNFSEAVKFFEYVRTK 62 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 FPF+ A S L A +++ +Y +AA ++++T +P + V+Y VG+SY + Sbjct: 63 FPFSKYAPLSELRLADLKFDQERYVEAAEAYQQFVTMHPTHEEVEYAELRVGLSYLRDAP 122 Query: 147 DV--------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 DQR + + + V+ +S + AR + +LA+ E +G Sbjct: 123 GDFVLFPPAHEKDQRQVEKAARALRDFVQAKPDSKHAPQARKLLAEAEGRLASHEWYVGE 182 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YY KR + A R++ ++A Y + H EA+ +L +Y+ + AR + + ++P Sbjct: 183 YYFKRKRWAGAAGRYEALVAKYPGSRHEAEALMKLARSYLEIDEKHRARTALQKLIVKHP 242 Query: 259 QGYWARYVETLV 270 Q E L+ Sbjct: 243 QDPRRPEAEKLL 254 >gi|33519651|ref|NP_878483.1| putative lipoprotein [Candidatus Blochmannia floridanus] gi|33517314|emb|CAD83699.1| DNA uptake lipoprotein [Candidatus Blochmannia floridanus] Length = 246 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 102/250 (40%), Gaps = 20/250 (8%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + I ++ + + S + +Y+ A L + N+++A + Sbjct: 2 RILFYIILALNMIMTISCTTISHHKIPDQDT------NHLYKIAYNKLLQNNYTEAIQDL 55 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + F ++ L + Y + A + ++ YP KN+DYV Y+ G+ Sbjct: 56 LYLKNLYLFEPCPQQIYLDLIYAYYKSNDLTSANNCINHFLNVYPNHKNLDYVLYIHGII 115 Query: 141 YAQMIRDVP--------------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + R+ P ++ + S++++ Y NS Y + + + Sbjct: 116 NMHLDRNNPFPLLIKHLYTCWFNHNPIHANIAFHSFSKLIQNYPNSQYAPDSYKRLIFLK 175 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 N++A ++ I ++Y K+ Y++ I R + +L + D + +A+ + AY + L+D+A Sbjct: 176 NRIAYYKLAIIKFYDKKNAYISVITRSEEMLRYFPDTQATYQALHYMRRAYQNIHLIDQA 235 Query: 247 REVVSLIQER 256 + +I E Sbjct: 236 NIINQIITEN 245 >gi|239906803|ref|YP_002953544.1| hypothetical protein DMR_21670 [Desulfovibrio magneticus RS-1] gi|239796669|dbj|BAH75658.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 245 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 96/221 (43%), Gaps = 7/221 (3%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +E+YE + ++++ A YF + +PF+ + + Y Sbjct: 31 PPPEDTAQELYEAGRQSMADKDYYGAINYFMKLKDRYPFSPYTPMGTVALGDAYFLTEDY 90 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 AA +E+ + +P S+ + YV Y VG+S + + Q + +QY + + + Sbjct: 91 GMAAETYKEFESVHPRSEEIPYVLYQVGVSNFKRSESIDMPQSNLQEAIQYFYLLEQTFP 150 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-A 229 ++ Y K A Y+ + ++A E+ + +Y + +Y AA R+ + NY D E E A Sbjct: 151 DTEYGKEAADYIRRCKKRMAEHELFVADFYWRTSQYGAAWKRYMYTVENYKDLEEVLEYA 210 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 R +Y+ E ++ ++ + + +G W + + + Sbjct: 211 KLRAELSYL------EYQKTLTENERQAIEGSWRHWTKRWL 245 >gi|303245508|ref|ZP_07331792.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio fructosovorans JJ] gi|302493357|gb|EFL53219.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio fructosovorans JJ] Length = 245 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 48/223 (21%), Positives = 96/223 (43%), Gaps = 11/223 (4%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +E+YE + E+++ A ++F + +PF+ + A + Y Sbjct: 31 PPPEDTAQELYEAGRQAMSEKDYYGAAKFFIKLKDRYPFSPYTPMGTIALADAYFLTEDY 90 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 AA +E+ + +P S+ + YV Y +G+S + + Q + LQY + + + Sbjct: 91 GPAAETYKEFESVHPRSEEIPYVLYQIGVSNFKRSESIDMPQGNLQEALQYFYLLQQTFP 150 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 ++ Y K A Y+ R +LA E+ + +Y + +Y AA R+ + N+ D E Sbjct: 151 DTEYGKEAAEYIRRCRKRLAEHELFVADFYWRTDQYGAAWKRYMYTVENFKDLEEV---- 206 Query: 231 ARLVEAYVALALM---DEAREVVSLIQERYPQGYWARYVETLV 270 AY L E ++ +S + R +G W +++ + Sbjct: 207 ----VAYSKLRAELSYLEYQKTLSEAERRKIEGSWHNWLKRWL 245 >gi|42521763|ref|NP_967143.1| competence protein ComL [Bdellovibrio bacteriovorus HD100] gi|39574293|emb|CAE77797.1| Competence protein ComL [Bdellovibrio bacteriovorus HD100] Length = 245 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 100/251 (39%), Gaps = 10/251 (3%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K I A+ LV + A + K + + +A Sbjct: 1 MLKTLRVIVILAALGTLVSCASTEKN---------SNTPEGAFAIAEEYDKSERYEEAIR 51 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + + FP++ A KS L A V Y Y +A + + +P N DYV + +G Sbjct: 52 RYTEVKNKFPYSNFATKSELAIADVYYKQESYAEAQVSYQMFKELHPTVPNSDYVQFRIG 111 Query: 139 MSYAQMIRD-VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 MSY + + D + +S ++++Y NS +V A+ T LA KE I Sbjct: 112 MSYYNQLPSTIDRDLTLANDTILNLSDLIKKYPNSEFVNEAKEKRTAAIRMLAEKEEYIA 171 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +Y KR + +A+ R++ + NY +A++R + + +A++ +++ + Sbjct: 172 DFYFKRKIFDSALGRYEGLYNNYRGLGFDAKALSRATISAQKIGDTAKAKKYEAVLARDF 231 Query: 258 PQGYWARYVET 268 P + E Sbjct: 232 PGSRELKDAEK 242 >gi|39995608|ref|NP_951559.1| putative lipoprotein [Geobacter sulfurreducens PCA] gi|39982371|gb|AAR33832.1| lipoprotein, putative [Geobacter sulfurreducens PCA] Length = 254 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 88/252 (34%), Gaps = 10/252 (3%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 LY L +A C L R + +A F + F A Sbjct: 9 LYPTLLIPLLFVAGCGLFASST----------APVSRSPESMAREAEEFQSSRRFEDAIA 58 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + + + + + + A Q+ +G Y +AA+ EE+ +P + Y Y G Sbjct: 59 QWRKVKESYISPELITLAEIKIADAQFDSGNYIEAAASYEEFRKLHPNHEKSAYALYRQG 118 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY I DQ + + Y S + + R + R E+ +G+ Sbjct: 119 LSYFNQIHGFDTDQTPVSNTVTIFESFLRLYPQSEHAEEVRNKLDAARQNQVQYEIYVGQ 178 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 +Y + +Y +AI R + L Y + +E + L +AY+ RE + + Sbjct: 179 FYYRTEKYTSAIKRLEDALKRYPRSPLHDETLYYLGKAYIKAGDKAGGREAFQRLFNEFR 238 Query: 259 QGYWARYVETLV 270 + + + Sbjct: 239 TSKYVDEARSFL 250 >gi|78224207|ref|YP_385954.1| putative lipoprotein [Geobacter metallireducens GS-15] gi|78195462|gb|ABB33229.1| lipoprotein, putative [Geobacter metallireducens GS-15] Length = 249 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 81/217 (37%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 R + + A F + A + + + + ++ L A Q++ Y +A Sbjct: 29 SRNPESMAKAAEEFQTSGRYEDAIAQWKKVRESYASPELTTEAELKIADAQFADKSYIEA 88 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 A+ EE+ +P + Y Y +S + I + DQ + + Y +S Sbjct: 89 AASYEEFRKLHPNHEKAPYALYRQALSQYEQITGIDTDQTPVSNAVTLFESFLRIYPSSE 148 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y R + V R + E+ +GR+Y + +Y AAI R + L Y + +E + L Sbjct: 149 YAAEVRDKLEVCRLKQVEHEIYVGRFYYRTDQYGAAIKRLEDALKKYPRSPAHDETLFYL 208 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 AY+ + R+ + Y + + Sbjct: 209 GSAYIRTGDKAKGRDAFQRLFAEYRTSKYVDEARKFM 245 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 39/124 (31%), Gaps = 22/124 (17%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMS-----------AFV---QYSAGKYQQAASLGEE 119 S A F R +P + A + +V Y +Y A E+ Sbjct: 131 SNAVTLFESFLRIYPSSEYAAEVRDKLEVCRLKQVEHEIYVGRFYYRTDQYGAAIKRLED 190 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + +YP S D + +G +Y + R+ Y S YV AR Sbjct: 191 ALKKYPRSPAHDETLFYLGSAYIRTGDKA--------KGRDAFQRLFAEYRTSKYVDEAR 242 Query: 180 FYVT 183 ++ Sbjct: 243 KFMD 246 >gi|283850645|ref|ZP_06367932.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio sp. FW1012B] gi|283573888|gb|EFC21861.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio sp. FW1012B] Length = 245 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 47/221 (21%), Positives = 96/221 (43%), Gaps = 7/221 (3%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +E+YE + E+++ A YF + +PF+ + A + Y Sbjct: 31 PPPEDTAQELYESGRQAMSEKDYYGAIGYFMKLKDRYPFSPYTPMGTVALADAYFLTEDY 90 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 AA +E+ + +P S+ + YV Y +G+S + + Q + LQY + + + Sbjct: 91 GPAAETYKEFESVHPRSEEIPYVLYQIGVSNFKRSESIDMPQGNLQEALQYFYLLEQTFP 150 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-A 229 ++ Y K A Y+ R +LA E+ + +Y + ++ AA R+ N+ D E E + Sbjct: 151 DTDYGKEAAEYIRRCRKRLAEHELFVADFYWRTDQFGAAWKRYMYTAENFKDLEEVLEYS 210 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 R +Y+ E ++ ++ + R +G W + + + Sbjct: 211 KLRAELSYL------EYQKTLTETERRKIEGSWRNWAKRWL 245 >gi|222053859|ref|YP_002536221.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. FRC-32] gi|221563148|gb|ACM19120.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. FRC-32] Length = 244 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 97/245 (39%), Gaps = 14/245 (5%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + KF + + I C V+ +++ F + + A Sbjct: 2 NMKKFLVGLVLFITGCAGTS--------------ETVKTADTYFKEGEDFYASRRYEDAI 47 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + + F + + L A + Y +AA+ +++ +P Y YY + Sbjct: 48 AEWKKVKESFSSPELTTMAELKIADAYFENRSYIEAAAAYDDFRKLHPNHDQAAYAYYRL 107 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + Y I + DQ K ++++ ++ Y + YV A+ + + EV +G Sbjct: 108 ALCYYNQITGIDTDQTPVKNAVKFLDSFIKLYPKAEYVPEAKAKLDECIGKQVEYEVYVG 167 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +YL+ G+Y AAI R + LA Y E++++ + + +AY + +E + + ++Y Sbjct: 168 HFYLRSGKYQAAIKRLEETLAKYPKVENSDQVLFYIGKAYFLSGDKAKGKEAFNRLAKQY 227 Query: 258 PQGYW 262 + Sbjct: 228 VSSRY 232 Score = 43.2 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 22/124 (17%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMS-----------AFV---QYSAGKYQQAASLGEE 119 A ++ + + +P A ++ +V +GKYQ A EE Sbjct: 126 KNAVKFLDSFIKLYPKAEYVPEAKAKLDECIGKQVEYEVYVGHFYLRSGKYQAAIKRLEE 185 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + +YP+ +N D V + +G +Y + +R+ ++Y +S Y++ AR Sbjct: 186 TLAKYPKVENSDQVLFYIGKAYFLSGDKA--------KGKEAFNRLAKQYVSSRYLEEAR 237 Query: 180 FYVT 183 + Sbjct: 238 QVME 241 >gi|218885504|ref|YP_002434825.1| lipoprotein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756458|gb|ACL07357.1| putative lipoprotein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 246 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 13/223 (5%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +E++E ++E+ + +A E F++ FPF+ ++ L A + Y Sbjct: 33 PPPEETAQELFEAGNDSMREKRYGEAAESFSKLKEQFPFSPYTIEAELSLADAHFLDEDY 92 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A +E+ T +P + + YV Y VG S + + +QY R+ E Y Sbjct: 93 LLAGEAYKEFETLHPRHEAIPYVLYQVGQSRQKAFLSIDRPTTGLTEAIQYYQRLRESYP 152 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE----HA 226 + Y + A+ ++T R LA +E+ IG ++ + Y AA R+ V+ N+ + E HA Sbjct: 153 GTEYAEKAKQHITECRRLLAERELYIGDFFWRAERYGAAWRRYVYVVENFPEIEDLRSHA 212 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 EE AY+ R+ S +G W R+ + L Sbjct: 213 EEKGKV---AYLK------YRQQQSQQVHEQREGSWKRWFKWL 246 >gi|298531012|ref|ZP_07018413.1| outer membrane assembly lipoprotein YfiO [Desulfonatronospira thiodismutans ASO3-1] gi|298509035|gb|EFI32940.1| outer membrane assembly lipoprotein YfiO [Desulfonatronospira thiodismutans ASO3-1] Length = 243 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 98/221 (44%), Gaps = 7/221 (3%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 +E+ + V ++++ ++KA EYF+ FPF+ + + +G Sbjct: 29 PEPLEDTPQELAQAGVDAMEQERYNKAIEYFSDLRDRFPFSPHTPTAEVALGDAYMKSGN 88 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y A ++ E+ P + + YV + G+++ + QR + L+Y R+ + Y Sbjct: 89 YDAAITVFTEFAEMNPRHEYMPYVLFRTGLAHFNKFTSIDRPQRNMQEALEYFRRVAQVY 148 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE-HAEE 228 + Y + +R+Y R ++A E+ I +Y + Y +A R++ V+ N+ D + E Sbjct: 149 PETEYAEYSRYYKVQCRKKIAEHELYIADFYWRTKRYGSAYERYRYVMDNFEDLPEYVEY 208 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 A R +Y +E VS + +G W +++ L Sbjct: 209 AGERAKRSYYK------HQEHVSSHKRATEEGSWRDWLDWL 243 >gi|94986809|ref|YP_594742.1| DNA uptake lipoprotein [Lawsonia intracellularis PHE/MN1-00] gi|94731058|emb|CAJ54421.1| DNA uptake lipoprotein [Lawsonia intracellularis PHE/MN1-00] Length = 240 Score = 178 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 11/245 (4%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + I + +L G Y + +E+YE A ++E+++++A EY+ + Sbjct: 6 VVLVIMLVYLPGCGIID----YFAVPRPEQTAQELYENAKDAMEEKHYAQAAEYYEKLKD 61 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 ++P + ++ + KY +A +E+ T +P ++ YV Y +GMS + Sbjct: 62 NYPLSPYTVEAERALGDALFFDEKYAEAVEAYKEFETLHPRHPDIPYVLYQIGMSNLKTF 121 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 + + + +Y R+ E + +SPY + A + R + E+ I + G+ Sbjct: 122 ISIDRPTTSIQEAYEYFQRVQETFPDSPYAEAAVNEMKACRLIMVEHELYIANVFWNMGK 181 Query: 206 YVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 Y A R+ +L N+SD E R + AY R+ S + G W R Sbjct: 182 YGPAWKRYTFILENFSDVPSVSEYTKERSLAAYF------LYRKQESQAEREQIHGSWKR 235 Query: 265 YVETL 269 L Sbjct: 236 LFNWL 240 >gi|77919977|ref|YP_357792.1| TPR domain-containing protein [Pelobacter carbinolicus DSM 2380] gi|77546060|gb|ABA89622.1| TPR domain protein [Pelobacter carbinolicus DSM 2380] Length = 245 Score = 178 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 105/248 (42%), Gaps = 8/248 (3%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 I F C L + V + + E + + L +++ A + + + Sbjct: 3 FIIAFLSVACLLTACSTAT--------VPEAKTAEEYFNRGELAFANEDYQDAIKSYEKA 54 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + A + R++ L A ++ Y +AA+ E+++ ++P + V + +G SY Sbjct: 55 MEIYETAALNRRAELRIADAHFANKDYVEAAAGYEDFLKRHPGTPQSARVLFQLGESYFN 114 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 I + DQ AT+ L +++ Y ++P + A V +N LAA E+ +G +Y K Sbjct: 115 QILAIDRDQTATRNALVTFESLIKIYPDAPESRIAPERVRACKNHLAANELYVGLFYYKF 174 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 ++ AAI R +L Y + ++ L ++ + A + +P+ A Sbjct: 175 EKHKAAIGRLTEMLDKYPECPDKDQVYYYLGRTFLDSGHPNLAVATFENLIADFPRSPLA 234 Query: 264 RYVETLVK 271 +T+++ Sbjct: 235 AEAKTILR 242 >gi|256828931|ref|YP_003157659.1| outer membrane assembly lipoprotein YfiO [Desulfomicrobium baculatum DSM 4028] gi|256578107|gb|ACU89243.1| outer membrane assembly lipoprotein YfiO [Desulfomicrobium baculatum DSM 4028] Length = 237 Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 92/194 (47%), Gaps = 1/194 (0%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 I F++ + D Y + D +E++E A F++++ +++A + + + +P Sbjct: 5 LILFSFVLLLNGCGAIDYYFLTPPD-DTAQELFENARGFMQDKEYAEAADSLTKLNDRYP 63 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 F+ A ++ LM A KY +A EE++ +P +++DYV + +G++ R + Sbjct: 64 FSPYATEARLMLADAYALDSKYLEAVDAYEEFLNMHPRHESIDYVLFQIGVNKYNSHRSI 123 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 ++ R+V Y S Y + A Y+ R +A E+ + +Y K G Y A Sbjct: 124 DLPHTQLGEAVESFRRLVSGYPKSIYREQALDYIVKCRKLMAEHEMFVADFYFKSGSYNA 183 Query: 209 AIPRFQLVLANYSD 222 A R+ ++ N+ + Sbjct: 184 AWTRYVYIIDNFPE 197 >gi|213023739|ref|ZP_03338186.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 161 Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 61/168 (36%), Gaps = 17/168 (10%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + ++ P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVK 176 ++ + V D + + S++V Y NS Y Sbjct: 114 LTNMALDDSVLQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTT 161 >gi|225630083|ref|YP_002726874.1| competence lipoprotein ComL, putative [Wolbachia sp. wRi] gi|225592064|gb|ACN95083.1| competence lipoprotein ComL, putative [Wolbachia sp. wRi] Length = 217 Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 115/229 (50%), Gaps = 12/229 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +YK +T F + F + + + E+YE+AV ++ + +A Sbjct: 1 MYKTLITCFIFLICSFTQSYADDLEK-----------TETELYEEAVELFDQKKYKQAIR 49 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F++ +PF+ A K+ L+S Y+ G Y AAS ++YI Y +++ YVYYL Sbjct: 50 AFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASDMDDYIYVYSNGEDLPYVYYLRV 109 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY I V Q+ L+ + + + S YV + + ++ KE IG+ Sbjct: 110 LSYYMQINKVQLGQQTAYKTLELATEYINLFPGSEYVDEIKERAKLITEHISTKEYSIGK 169 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 +YL+RGEY+AAI RFQ + A+Y D+++ +++ LV A+ AL L EA Sbjct: 170 FYLRRGEYLAAIKRFQNM-ASYKDSKYFSKSINYLVAAHSALGLDLEAE 217 >gi|42520353|ref|NP_966268.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410091|gb|AAS14202.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of Drosophila melanogaster] Length = 235 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 68/235 (28%), Positives = 118/235 (50%), Gaps = 12/235 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +YK +T F + F + + + E+YE+AV ++ + +A Sbjct: 1 MYKTLITCFIFLICSFTQSYADDLEK-----------TETELYEEAVELFDQKKYKQAIR 49 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F++ +PF+ A K+ L+S Y+ G Y AAS +YI Y +++ YVYYL Sbjct: 50 AFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASDMADYIYVYSNGEDLPYVYYLRV 109 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY I V Q+ L+ + + + S YV + + ++ KE IG+ Sbjct: 110 LSYYMQINKVQLGQQTAYKTLELATEYINLFPGSEYVDEIKERAKLITEHISTKEYSIGK 169 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +YL+RGEY+AAI RFQ + A+Y D+++ +++ L+ A+ AL L EA + S++ Sbjct: 170 FYLRRGEYLAAIKRFQNM-ASYKDSKYFSKSINHLIAAHSALGLDLEAEQYESML 223 >gi|225677404|ref|ZP_03788371.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590548|gb|EEH11808.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 235 Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 67/235 (28%), Positives = 116/235 (49%), Gaps = 12/235 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +YK +T F + F + + + E+YE+AV ++ + +A Sbjct: 1 MYKTLITCFIFLICSFTQSYADDLEK-----------TETELYEEAVELFDQKKYKQAVR 49 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F++ +PF+ A K+ L+S Y+ G Y AAS +YI Y +++ YVYYL Sbjct: 50 AFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASDMADYIYVYSNGEDLPYVYYLRV 109 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY I V Q+ L+ + + + S YV + + ++ KE IG+ Sbjct: 110 LSYYMQINKVQLGQQTAYKTLELATEYINLFPGSEYVGEIKEKAKLITEHISTKEYSIGK 169 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +YLKRGEY+AAI RFQ + +Y D+++ +++ L+ A+ AL L E + S++ Sbjct: 170 FYLKRGEYLAAIKRFQN-IESYKDSKYFSKSINYLIAAHSALGLDLEVEQYESML 223 >gi|297171549|gb|ADI22547.1| DNA uptake lipoprotein [uncultured Oceanospirillales bacterium HF0500_09M11] Length = 187 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 10/160 (6%) Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP----------YDQRATKLMLQYMSRI 165 + ++ YP + +DY Y+ G++ M R D + + + R+ Sbjct: 3 AAQRFMRSYPAHQRLDYALYMRGLANFYMERGFFDSMMNTDKSARDLSSARDAFEDFERL 62 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V R+ +S Y + AR + RN+ A E+ RYY +RG Y+AAI R Q V+ +Y Sbjct: 63 VTRFPDSEYSEDARARMVFIRNEFARHELHAARYYARRGAYIAAIGRAQYVVQHYQQTPL 122 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 EA+A +V+ Y L A + ++ +P + Sbjct: 123 VPEALAIMVKGYERLDRPALADKSRRILATNWPDSEYLED 162 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 18/117 (15%), Positives = 36/117 (30%), Gaps = 22/117 (18%) Query: 75 KAYEYFNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEY 120 A+E F + FP + + + L +A G Y A + Sbjct: 54 DAFEDFERLVTRFPDSEYSEDARARMVFIRNEFARHELHAARYYARRGAYIAAIGRAQYV 113 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + Y ++ V A M++ R L + + + +S Y++ Sbjct: 114 VQHYQQTPLVPEAL-------AIMVKGYERLDRPA-LADKSRRILATNWPDSEYLED 162 >gi|115377512|ref|ZP_01464712.1| NrfG protein, putative [Stigmatella aurantiaca DW4/3-1] gi|310820081|ref|YP_003952439.1| competence lipoprotein ComL [Stigmatella aurantiaca DW4/3-1] gi|115365452|gb|EAU64487.1| NrfG protein, putative [Stigmatella aurantiaca DW4/3-1] gi|309393153|gb|ADO70612.1| competence lipoprotein ComL [Stigmatella aurantiaca DW4/3-1] Length = 258 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 103/258 (39%), Gaps = 11/258 (4%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + +T + + + D + L+ +++ KA +YF Sbjct: 2 RLTVTCLTTFLLLSTGCASLSERQAGDPDYAAQADENLRL---GSEALEGRDYFKAEKYF 58 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 FP+ ++ + L A V + ++ +A +I YP VDY Y V +S Sbjct: 59 EFVKTKFPYLEASKTAELRLADVDFVQDRFPEAREKYNAFIKAYPTHPQVDYAAYQVALS 118 Query: 141 YAQMIRDV--------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 + + + DQ + L+ ++ + +Y +S Y AR + +LA Sbjct: 119 HVEDMPSDFFLLPPSEEKDQTEVQSALRALNDFLRQYPDSQYTPQARVQADDAKRRLAEH 178 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E+ + +Y KR + A R + +L+ Y ++ E A+ L EAYV L A+E + Sbjct: 179 ELYVAAFYRKRERWRAVAQRLEGMLSRYPGTKYEESALFSLHEAYVKLKEPTRAQETLRQ 238 Query: 253 IQERYPQGYWARYVETLV 270 + +R P A + ++ Sbjct: 239 VIQRLPGTPAAERAQRML 256 >gi|308272037|emb|CBX28645.1| hypothetical protein N47_G39690 [uncultured Desulfobacterium sp.] Length = 218 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 89/213 (41%), Gaps = 8/213 (3%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 + + F I G ++ + +E ++ ++ +++ + +A E F + Sbjct: 8 VILLFCIMAFACYGCATLDTKKE--------KSAKEYADEGMVSFQDKEYKRAIESFQKI 59 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +PF+ + L A Y +Y +A + E+ +P ++ V YV + G+ Y + Sbjct: 60 KDWYPFSNYLVLADLKIADSHYMLKQYNEAVAAYNEFEKLHPANEAVPYVIFQTGLCYFE 119 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 + Q + ++ R+ +++ + Y R + + LA E+ IG +Y K Sbjct: 120 QVDTFDRQQATARKAIEIFMRLNKQFPKNIYETKTRECINICYKTLAESELGIGLFYYKS 179 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 Y AA+ RF+ VL Y D +A+ + Sbjct: 180 KYYKAALYRFRNVLTKYPDTGVHHQAIIYIARC 212 >gi|218780247|ref|YP_002431565.1| outer membrane assembly lipoprotein YfiO [Desulfatibacillum alkenivorans AK-01] gi|218761631|gb|ACL04097.1| outer membrane assembly lipoprotein YfiO [Desulfatibacillum alkenivorans AK-01] Length = 266 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 84/183 (45%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + + E+ + + ++ ++++A E F + +PF+ A + L A + Y+ Sbjct: 24 SKEKPAEELAADGIRYYEKGDYTQAIESFEKLKDWYPFSKYAILAELKLADSYFKRKNYE 83 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A E + + +P + + YV + +GM Y + DQ AT+ L+ R+ Y Sbjct: 84 DAIYAYEYFESLHPRNDAIPYVIFQIGMCYFEQKALPDRDQTATESALENFLRLTREYPA 143 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 S A ++ + + LA ++ +G YY K E+ AA RF+ +LA Y D +A+ Sbjct: 144 SAEAAMALEHIKICQETLARHDLFVGAYYFKAKEFHAARVRFRDILAAYPDVGVHRQALE 203 Query: 232 RLV 234 + Sbjct: 204 YVA 206 >gi|328951914|ref|YP_004369248.1| outer membrane assembly lipoprotein YfiO [Desulfobacca acetoxidans DSM 11109] gi|328452238|gb|AEB08067.1| outer membrane assembly lipoprotein YfiO [Desulfobacca acetoxidans DSM 11109] Length = 241 Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats. Identities = 47/222 (21%), Positives = 87/222 (39%), Gaps = 7/222 (3%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + ++ G S + + + ++ + L++ + A + F + Sbjct: 11 VITAMLFSLTAGCGWFSKKK-------PEQPPETLVQEGMKKLRKGKYEDAVDAFEKLKD 63 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +P++ A + L A +Y KY +A +E+ +P ++ + YV Y GM Y + Sbjct: 64 RYPYSDEALLASLKVADAKYYNKKYDEALLDYKEFEKLHPTNQIIPYVIYQQGMCYYRQR 123 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 + D T +Q R+ ERY + A Y+ N+LA E +G +Y K Sbjct: 124 STIDRDPTYTVKAVQEYRRLKERYPQYEKISKAEDYMDKCLNELADHEYYVGEFYFKNKH 183 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 Y AA+ RF ++ Y D + LA +A Sbjct: 184 YQAALERFAIIEQEYPDYLKMPRVKQYMARCEDILANPVKAE 225 >gi|327399434|ref|YP_004340303.1| outer membrane assembly lipoprotein YfiO [Hippea maritima DSM 10411] gi|327182063|gb|AEA34244.1| outer membrane assembly lipoprotein YfiO [Hippea maritima DSM 10411] Length = 251 Score = 174 bits (443), Expect = 8e-42, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 98/246 (39%), Gaps = 4/246 (1%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 I L G + + + E Y + + ++S+A + Sbjct: 5 IALLGICAIALAGCSSHKK----IIPKEEEKPAYEWYNEGIQDYINHDYSEAEHALTMIN 60 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 P + A+++ + V ++ G+Y A ++I YP SK Y Y + +S+ + Sbjct: 61 AQHPGSIYAKRATIALGDVYFAKGEYILARDYYRKFIKLYPNSKEAVYAKYHIALSFYKA 120 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 D + ++ ++++Y N+PY +Y+T +L E+ + ++Y Sbjct: 121 RNGYKCDATPVREAIKEFLDLLDKYPNNPYKDKIYYYITKSVEELYKHELFVAKFYADLD 180 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 E+ AA R + ++ + +E + L + Y L +A+E + ++YP +A Sbjct: 181 EFNAAKNRLNYMYKHFKNVNFNDEMLFLLGKVYYHLGKKQQAKEFFKELIKKYPNSDYAG 240 Query: 265 YVETLV 270 + + Sbjct: 241 KAKEFI 246 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 20/172 (11%), Positives = 52/172 (30%), Gaps = 51/172 (29%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-----KYQQAASLGE 118 ++ + + A +Y+ + + +P + A + A Y A + Sbjct: 77 GDVYFAKGEYILARDYYRKFIKLYPNSKEAVYAKYHIALSFYKARNGYKCDATPVREAIK 136 Query: 119 EYITQ---YPESKNVDYVYYLVGMS------------------------------YAQMI 145 E++ YP + D +YY + S + Sbjct: 137 EFLDLLDKYPNNPYKDKIYYYITKSVEELYKHELFVAKFYADLDEFNAAKNRLNYMYKHF 196 Query: 146 RDVPYDQRAT-------------KLMLQYMSRIVERYTNSPYVKGARFYVTV 184 ++V ++ + ++ ++++Y NS Y A+ ++ Sbjct: 197 KNVNFNDEMLFLLGKVYYHLGKKQQAKEFFKELIKKYPNSDYAGKAKEFINE 248 >gi|67809654|gb|AAY81973.1| putative competence lipoprotein [Wolbachia pipientis] Length = 209 Score = 174 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 111/200 (55%), Gaps = 1/200 (0%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + + E+YE+AV ++ ++KA F++ +PF+ A K+ L+S Y+ G Y A Sbjct: 6 EKTETELYEEAVELFDQKKYNKAIRAFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSA 65 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 AS ++YI Y +++ YVYYL +SY I V Q+ L+ + + + S Sbjct: 66 ASDMDDYIYVYSNGEDLPYVYYLRVLSYYMQINKVQLGQQTAYKTLELATEYINLFPGSE 125 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 YV + + ++ KE IG++YL+RGEY+AAI RFQ + A+Y D+++ +++ L Sbjct: 126 YVDEIKERAKLITEHISTKEYSIGKFYLRRGEYLAAIKRFQNM-ASYKDSKYFSKSINYL 184 Query: 234 VEAYVALALMDEAREVVSLI 253 + A+ AL L EA + S++ Sbjct: 185 IAAHSALGLDLEAEQYESML 204 >gi|108757392|ref|YP_630233.1| putative competence lipoprotein ComL [Myxococcus xanthus DK 1622] gi|108461272|gb|ABF86457.1| putative competence lipoprotein ComL [Myxococcus xanthus DK 1622] Length = 261 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 102/254 (40%), Gaps = 10/254 (3%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 F S + F G + V + L+ ++F +A +YF Sbjct: 8 VAFLSAFLLFGTGCASLTQGQAGEPDYAAVADENL--RLGSEALENKDFFRAQKYFEYVR 65 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY--- 141 FP+ AR++ L A V + + +A + +I +P VDY + M++ Sbjct: 66 TKFPYQEAAREAELKLADVDFEREAFPEAKEQYQSFIKLHPTHAKVDYAAFRSAMTHVRA 125 Query: 142 -----AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 + DQ + L M + +Y S YV A+ R +LA+ E+ Sbjct: 126 YPSEFFALPPSREKDQGEIRSALVAMEEFLRQYPQSQYVAEAKTQREDARRRLASHELYA 185 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 ++Y KR + A R + +L Y E+ EEA+ L +AYV L ++A++ + + R Sbjct: 186 AQFYQKRERWKAVAQRLEGLLRRYPGTEYEEEALFDLHDAYVKLNDTEKAQDTLRQVLRR 245 Query: 257 YPQGYWARYVETLV 270 P A + ++ Sbjct: 246 LPGTPAAERAQRML 259 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 27/81 (33%), Gaps = 1/81 (1%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E+Y A + K + + + R +P ++L ++A Sbjct: 181 HELYA-AQFYQKRERWKAVAQRLEGLLRRYPGTEYEEEALFDLHDAYVKLNDTEKAQDTL 239 Query: 118 EEYITQYPESKNVDYVYYLVG 138 + + + P + + ++G Sbjct: 240 RQVLRRLPGTPAAERAQRMLG 260 >gi|322421378|ref|YP_004200601.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. M18] gi|320127765|gb|ADW15325.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. M18] Length = 260 Score = 172 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 83/209 (39%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + + +++ ++F +A F + + ++ ++ L A + Sbjct: 24 APAPAKSAESYFKEGEAAYASRHFEEAITQFKKVKESYSSPELSAQAELKIADAYFENDA 83 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + +AA+ E + +P ++ V Y Y +S I + DQ K + Y+ + +Y Sbjct: 84 FIEAAAEYESFRKLHPTNEKVPYALYRQALSNYSQITGIDTDQTPVKNAVHYLEMFLAQY 143 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 S + AR ++ R + A E +G +Y++ +Y +AI R L + + Sbjct: 144 PGSEHAADARAKLSDCRAKELAYENYVGNFYVRTKKYPSAIKRLNEALERFPGEPGLADT 203 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYP 258 ++ L +AY A E + YP Sbjct: 204 LSYLEQAYRKSGDAARAEEARKRLAAEYP 232 >gi|255610036|ref|XP_002539124.1| Competence lipoprotein comL precursor, putative [Ricinus communis] gi|223508511|gb|EEF23259.1| Competence lipoprotein comL precursor, putative [Ricinus communis] Length = 169 Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats. Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 9/148 (6%) Query: 123 QYPESKNVDYVYYLVGMSYAQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 +P N+DY YYL G++ D + ++ +VER+ S Sbjct: 1 LHPNHPNLDYAYYLKGLATFNERGIMEKYTKQEINDRDPKTLRVSFNAFKELVERFPTSR 60 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y K + + N LA E+ + RYY++R YVAA+ R + VL Y ++ E+A+ + Sbjct: 61 YAKDSTQRMVYLVNTLAMHEMHVARYYMQRKAYVAALNRTRYVLETYPNSSSVEDALVTM 120 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGY 261 + AY A+ + D + + +++ YP+ Sbjct: 121 ISAYDAMDMADLKADTLRILKTNYPENP 148 >gi|284105818|ref|ZP_06386222.1| DNA uptake lipoprotein-like protein [Candidatus Poribacteria sp. WGA-A3] gi|283830105|gb|EFC34371.1| DNA uptake lipoprotein-like protein [Candidatus Poribacteria sp. WGA-A3] Length = 329 Score = 171 bits (435), Expect = 7e-41, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 94/256 (36%), Gaps = 23/256 (8%) Query: 16 AYQLYKFALTIF-FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74 +++ +T+F S+ C +G S S R +++ + + Sbjct: 1 MPHVFRHPVTLFILSVTSCLTLGCSMFSDNKTPAPSTDAGRTDAQIFVGDTIEMN----- 55 Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 ++ A + Y +A + ++ + Y Sbjct: 56 -----------------YDPNVIMKRAESFHEKEGYAEAIVEYQHFLDLHRNHILAPYAQ 98 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 Y + +S+ +MI+ + D K + ++ + S Y AR + + LA Sbjct: 99 YRLALSHFKMIQTIDRDMTPVKKAQEEFWELIHGFPASQYEAEARVKIKECQGLLAKNHF 158 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +G++Y R +Y+AA RF+ ++ Y E A E+ L + Y L +D AR+ + Sbjct: 159 FVGKFYYHREQYLAAAKRFEKIIIGYPSTEEAIESKLELAKTYQQLGALDWARDWAVELV 218 Query: 255 ERYPQGYWARYVETLV 270 +++P+ L+ Sbjct: 219 QQHPRHQLRGDGLKLL 234 >gi|253699141|ref|YP_003020330.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. M21] gi|251773991|gb|ACT16572.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. M21] Length = 256 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 93/246 (37%), Gaps = 9/246 (3%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + +C + T ++ +++ +N+++A E + + Sbjct: 9 LALCSVLCLISACAST---------PTPIKSADAYFKEGEAAYASRNYAEAIESWKKVKE 59 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 + ++ L A + Y +AA+ E++ +P Y Y + +S+ Q I Sbjct: 60 SDTSPELTSQAELKIADAHFENKAYIEAAAAYEDFRKLHPTHPQAPYALYRLALSHYQQI 119 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 DQ K + + + +Y S Y + R++ A E +G +YL+ + Sbjct: 120 AGTDTDQTPVKNAVATLEAFLGQYPRSEYAPELSKKLADCRDKQLAYENYVGNFYLRSEK 179 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 Y +AI R L + ++ + L +AY+ + + + V+ + +P R Sbjct: 180 YQSAIKRLNEALVRFPGLTRLDDTLFYLGKAYLKAGELQQGKVVLQRLAAEHPASPRNRE 239 Query: 266 VETLVK 271 L++ Sbjct: 240 AAALLQ 245 >gi|197116873|ref|YP_002137300.1| outer membrane protein assembly lipoprotein YfiO [Geobacter bemidjiensis Bem] gi|197086233|gb|ACH37504.1| outer membrane protein assembly lipoprotein YfiO, putative [Geobacter bemidjiensis Bem] Length = 256 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 94/246 (38%), Gaps = 9/246 (3%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + A+C + V+ +++ +N+++A E + + Sbjct: 9 LALCSALCLISACAST---------PAPVKSADAHFKEGEAAYASRNYAEAIESWKKVKE 59 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 G+ ++ L A + Y +AA+ E++ +P Y Y + +S+ Q I Sbjct: 60 SDTAPGLTSQAELKIADAHFENKAYIEAAAAYEDFRKLHPTHPQAPYALYRLALSHYQQI 119 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 DQ K + + + +Y S Y + R++ A E +G +YL+ + Sbjct: 120 TGTDTDQTPVKNAVATLEAFLGQYPRSEYAPELSGKLADCRDKQLAYENYVGNFYLRTEK 179 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 Y +AI R L + ++ + L +AY+ + + + V+ + +P + Sbjct: 180 YQSAIKRLNEALVRFPGLTRLDDTLFYLGKAYLKAGDVKQGKVVLQRLAAEHPGSPRNKE 239 Query: 266 VETLVK 271 L++ Sbjct: 240 AAALLQ 245 >gi|94676731|ref|YP_588649.1| hypothetical protein BCI_0192 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219881|gb|ABF14040.1| conserved hypothetical protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 231 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 79/196 (40%), Gaps = 12/196 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 E Y A L++ + +A + + F ++ L + Y Q+A +L Sbjct: 31 PAETYASARQKLQQGYYKQAIKQLEALDNYYMFGPNTQQLQLDLIYAYYKLSNMQKAQNL 90 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQM------------IRDVPYDQRATKLMLQYMSR 164 + ++ N DYV Y+ G+ ++ D + + + + Sbjct: 91 IDRFLRTNANHSNTDYVLYICGLIEMKLDEQALSKYFLFGFNHFERDPKHARAAVISFQQ 150 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 ++ Y +S Y A+ + +N+LA E+ + +Y K G YVA + R + +L+N+ + Sbjct: 151 LINNYPHSIYAIDAKKILIYLQNRLANYELTVIEFYSKVGAYVAVVTRVKHMLSNFPNNN 210 Query: 225 HAEEAMARLVEAYVAL 240 +A + AY L Sbjct: 211 ATYQARKHMERAYQQL 226 >gi|95929334|ref|ZP_01312077.1| lipoprotein, putative [Desulfuromonas acetoxidans DSM 684] gi|95134450|gb|EAT16106.1| lipoprotein, putative [Desulfuromonas acetoxidans DSM 684] Length = 252 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 1/218 (0%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + S RE+ +K + ++++++ A E++ + F + + L Sbjct: 17 CSSNKSATQTASPATSEAMREL-QKGEIAMEKEHYLAAIEHWQKVRDSFTSPELTALAEL 75 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 Y+ Y A + E+++ ++P V Y +G S+ + DQ AT+ Sbjct: 76 KIGDAYYAQEDYISAVASYEDFLKKHPGHTQTASVMYRLGKSHFAQLLSADRDQTATRNA 135 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 L ++++ Y +S + Y+ N+LAA E IGR+YLK Y AAI R + + Sbjct: 136 LATFEQLLKNYPDSIDPQELNSYIEQCHNRLAANEAYIGRFYLKTKRYTAAISRLENITN 195 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 Y + + + L A D+A +SL+Q+R Sbjct: 196 TYPNYPNLTGVLFDLARAQKFDGKSDQALATLSLLQQR 233 >gi|313672442|ref|YP_004050553.1| outer membrane assembly lipoprotein yfio [Calditerrivibrio nitroreducens DSM 19672] gi|312939198|gb|ADR18390.1| outer membrane assembly lipoprotein YfiO [Calditerrivibrio nitroreducens DSM 19672] Length = 254 Score = 169 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 6/206 (2%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFN--QCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + E ++ + +++ + KA E + P +A ++ L+ + + Sbjct: 25 PPKKPAEEWLKEGTQYFQKKKYQKAAEALENAIIEAESP--ELAAQAQLLLGDSYFLMKE 82 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+QA +EY+ YP+S + Y +G+SY + V D +L L+ +++ E+Y Sbjct: 83 YEQAIPSYKEYLNIYPDSPDAKRAMYRLGLSYYNQVDTVDRDLENAELALKTFTQLKEKY 142 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 + +N LA KE+ + ++Y + E +AI R + ++ N+ D + E Sbjct: 143 PEFAKENKVDKKIVELKNLLAEKELYVAKFYFRIKEPSSAIKRLEYLVKNFKDTKSYPEG 202 Query: 230 MARLVEAYVALALMDEAREVVSLIQE 255 + L E+YV D+A+EVV+L+ E Sbjct: 203 LIMLAESYV--DKPDKAQEVVNLLTE 226 Score = 43.6 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 8/78 (10%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA--------LA 241 A ++ +G Y EY AIP ++ L Y D+ A+ AM RL +Y L Sbjct: 67 AQAQLLLGDSYFLMKEYEQAIPSYKEYLNIYPDSPDAKRAMYRLGLSYYNQVDTVDRDLE 126 Query: 242 LMDEAREVVSLIQERYPQ 259 + A + + ++E+YP+ Sbjct: 127 NAELALKTFTQLKEKYPE 144 >gi|330901398|gb|EGH32817.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. japonica str. M301072PT] Length = 166 Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 14/153 (9%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 SS++V +++++V E+Y++A L +++ A E +PF A ++ L Sbjct: 18 CSSKEVIDENLSEV----ELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLEL 73 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPY 150 + Y G+ + A S E +I +P+ NVDY YY+ G++ Sbjct: 74 IYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKR 133 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 D A + +++ R+ NS Y A+ + Sbjct: 134 DPGAARDSFNEFAQLTSRFPNSRYAPDAKQRMI 166 >gi|190571590|ref|YP_001975948.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018995|ref|ZP_03334802.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357862|emb|CAQ55321.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995104|gb|EEB55745.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 228 Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 69/237 (29%), Positives = 121/237 (51%), Gaps = 12/237 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +YK + FF + F L + + E+YE+AV ++ + +A Sbjct: 1 MYKTLIICFFLLTCPF-----------TQLYANDLEHTETELYEEAVKLYDQKKYKQAIR 49 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F + +P + A K+ L+S Y+ G Y AAS ++YI YP +++ YVYYL Sbjct: 50 AFQKIEDLYPLSYWAMKAKLLSGVSYYNMGNYSSAASDMDDYIYVYPNGEDLPYVYYLRV 109 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY I V Q+ L+ + + + NS Y++ + + ++ KE IG Sbjct: 110 LSYYMQINKVQLGQQIAYKTLELATEYINLFPNSEYIEEIKEKEKLITEHISKKEYSIGE 169 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 +YLKRGEY+AAI RFQ +++N D++++ ++ L+ A++AL L EA + +++ E Sbjct: 170 FYLKRGEYLAAIKRFQDMISN-KDSKYSSRVISYLITAHLALGLDLEAEQYENMLVE 225 >gi|254797247|ref|YP_003082089.1| putative competence protein ComL [Neorickettsia risticii str. Illinois] gi|254590495|gb|ACT69857.1| putative competence protein ComL [Neorickettsia risticii str. Illinois] Length = 227 Score = 168 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 6/227 (2%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 +LY F F C L G S+ V V + + +Y AVL L+++N+ A Sbjct: 3 RKLYNFLFVCFL----CVLSGCGVGKSKKVLNSKVRED--ELSMYSSAVLSLEKKNYKAA 56 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 E F + + PF+ + K+ + Y GK+ AA E Y+ YP+ + VD V + Sbjct: 57 KELFEKVADIAPFSSIGEKAKASYTKILYDEGKFAAAAGSAEGYLLNYPDGEKVDQVLNI 116 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 G +Y QM + + +++ + S YV A+ + +A K I Sbjct: 117 KGNAYFQMSKGRTNSGEFADKARDAFTVLIQTFPASEYVTDAQKKLLEIDEIMAEKIFSI 176 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 G +Y K Y AAI RF +L +YS + + A+++ +EAY L + Sbjct: 177 GSFYFKEMNYHAAIARFDELLRDYSRTKLYDAALSKRLEAYKMLGVD 223 Score = 39.7 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 8/76 (10%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL--------MDEAREVVSL 252 G++ AA + L NY D E ++ + AY ++ D+AR+ ++ Sbjct: 85 YDEGKFAAAAGSAEGYLLNYPDGEKVDQVLNIKGNAYFQMSKGRTNSGEFADKARDAFTV 144 Query: 253 IQERYPQGYWARYVET 268 + + +P + + Sbjct: 145 LIQTFPASEYVTDAQK 160 >gi|85860041|ref|YP_462243.1| ComL family lipoprotein [Syntrophus aciditrophicus SB] gi|85723132|gb|ABC78075.1| lipoprotein, ComL family [Syntrophus aciditrophicus SB] Length = 239 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 88/196 (44%), Gaps = 5/196 (2%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 +Y + + + KA E F + ++P + +A + + YS Y +A + Sbjct: 39 TPEGLYRRGYEDYQNGRYKKAIESFERLRDEYPMSELAILAKVGIGDAHYSNKAYAEAEA 98 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 +++ +P ++N+ YV Y +GM + + + + DQ T + +++ R+ +S + Sbjct: 99 AYNDFVYLHPTNENLPYVMYQIGMCHYKQMLSIDRDQTETVRAAKEFEKLLARFPDSKFS 158 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 A + R ++A E +G +Y K+ +Y AA+ RF+ + Y++ + V Sbjct: 159 LMAEKMLRECRVRIAEHEFYVGEFYFKQKKYQAALKRFETINREYANL-----GLDYKVS 213 Query: 236 AYVALALMDEAREVVS 251 AY+ A+E Sbjct: 214 AYIRETQKRIAQEKAR 229 >gi|268316246|ref|YP_003289965.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM 4252] gi|262333780|gb|ACY47577.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM 4252] Length = 280 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 98/257 (38%), Gaps = 23/257 (8%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 L I +A C G R SS +E +E+A+ F + + +A EYF Sbjct: 13 LLVIGLLVAGCAGSGRLRHSS-------------PQEAFERAMEFYNQGKYDRAIEYFKA 59 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 A + A Y +Y AAS E +I Y V Y M Y Sbjct: 60 VFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYY 119 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 ++ DQ T+ ++ ++RY N V A + R +LA K+ E R Y + Sbjct: 120 KLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYER 179 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA-------LMDEAREVVSL--- 252 R Y AA ++ V Y D A++A+ + AY+A A + R V L Sbjct: 180 RELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYER 239 Query: 253 IQERYPQGYWARYVETL 269 + + +P R E L Sbjct: 240 LLQIFPDSPLLRTAEEL 256 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 52/165 (31%), Gaps = 24/165 (14%) Query: 53 DVRYQREVYEKAV--------LFLKEQNFSKAYEYFNQCSRDFPFAGVARKS-------- 96 D R + YE+A+ L + + KA E F +P + + Sbjct: 104 DPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELR 163 Query: 97 ------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY--LVGMSYAQMIRDV 148 +A + Y+ AA E YP++ D + Sbjct: 164 AKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVR 223 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + ++ R+++ + +SP ++ A T R +L E Sbjct: 224 ARQPERYRRAVELYERLLQIFPDSPLLRTAEELYTRARQRLTELE 268 >gi|206603307|gb|EDZ39787.1| Probable DNA uptake lipoprotein [Leptospirillum sp. Group II '5-way CG'] Length = 243 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 76/180 (42%) Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 +LL A Y G + +A + ++ +P + Y +GM I V Sbjct: 50 AYGTSALLDEASRFYFKGDFIEARGEYKRFLELHPTHPLAAFAQYRMGMCDYYQILSVDR 109 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D + L ++++ + +S YV A+ + V R++L+ +G +Y K + AA Sbjct: 110 DPTPVRKALADFQKVIDEFPDSSYVGKAQKKIAVCRDRLSRVHFYVGYFYYKTKRFKAAS 169 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 RF +L Y D+ + A + L +A ++ + +++P+ +AR L+ Sbjct: 170 YRFHTILLKYPDSRKYDRAEFYFALSKFHLKQRHQAVRLLKRLIQQFPKSKYARKSSILL 229 >gi|320355040|ref|YP_004196379.1| outer membrane assembly lipoprotein YfiO [Desulfobulbus propionicus DSM 2032] gi|320123542|gb|ADW19088.1| outer membrane assembly lipoprotein YfiO [Desulfobulbus propionicus DSM 2032] Length = 291 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 78/171 (45%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + + ++ +A + F + PF+ A + L +A Y +Y +A +L + + Sbjct: 60 QGMDAYNVGDYGEAIKNFKIILDEHPFSAQAMLAELKAADANYYNKQYAEAKTLYKSFEE 119 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 ++P ++ + YV + VGM + + D + ++ +R++ Y SPY K A+ + Sbjct: 120 RHPTNEAIPYVMFQVGMCDYRRSDRIDRDASGPQEAIKSFTRLINAYPQSPYAKEAKAKI 179 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 + L E + +Y++ A R + +LA Y D+ A +A A L Sbjct: 180 IECKEFLVNHEYMVAVFYVRTDRQEEAKHRLKYLLAMYPDSNLAPQAKALL 230 >gi|124516467|gb|EAY57975.1| probable DNA uptake lipoprotein [Leptospirillum rubarum] Length = 243 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 76/180 (42%) Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 +LL A Y G + +A + ++ +P + Y +GM I V Sbjct: 50 AYGTSALLDEASRFYFKGDFIEARGEYKRFLELHPTHPLAAFAQYRMGMCDYYQILSVDR 109 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D + L ++++ + +S YV A+ + + R++L+ +G +Y K + AA Sbjct: 110 DPTPVRKALSDFQKVIDEFPDSNYVGKAQKKIAICRDRLSRVHFYVGYFYYKTKRFKAAS 169 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 RF +L Y D+ + A + L +A ++ + +++P+ +AR L+ Sbjct: 170 YRFHTILLKYPDSRKYDRAEFYFALSKFHLKQRHQAVHLLKRLIQQFPKSKYARKSSILL 229 >gi|162451869|ref|YP_001614236.1| hypothetical protein sce3596 [Sorangium cellulosum 'So ce 56'] gi|161162451|emb|CAN93756.1| hypothetical protein sce3596 [Sorangium cellulosum 'So ce 56'] Length = 285 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 8/221 (3%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 VG + + + D ++T R Y +A+ + +++ A F + R FP++ AR Sbjct: 21 VGCDFELN-DGRTATLTYTEDARAAYNEAMAAFQAKDWEDARALFGEVKRLFPYSRYARL 79 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV------- 148 + L A + + GKY +A S +I ++ +NV+Y Y + + I D Sbjct: 80 ADLRIADLDFEQGKYPEAISEYRAFIQEHRTDRNVEYAKYRMAKALYLDIDDTVFLPPAE 139 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 DQ T + + + +Y S Y + A + + V +L E+ + RYYLK + A Sbjct: 140 ERDQATTLEAYKEIRTFLRQYPRSRYREDAAYMLEVVTGRLVRHELYVARYYLKEDAFDA 199 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A+ R L + + EA+ E + + DEAR V Sbjct: 200 ALARIDYALRTFPGSGLDPEALVLKGETLLKMKKPDEARAV 240 >gi|88608266|ref|YP_506787.1| putative competence protein ComL [Neorickettsia sennetsu str. Miyayama] gi|88600435|gb|ABD45903.1| putative competence protein ComL [Neorickettsia sennetsu str. Miyayama] Length = 219 Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 2/213 (0%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 +C L G S+ + + V + + +Y AVL L+++N+ A E F + + PF+ Sbjct: 6 LCVLSGCGVGKSKKILNNKVRED--ELSMYNSAVLSLEKKNYKVAKELFEKVADIAPFSS 63 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 + K+ + Y GK+ AA E Y+ YP+ + +D V + G +Y QM + Sbjct: 64 IGEKAKASYTKILYDEGKFAAAAGSAEGYLLDYPDGEKMDQVLNIKGNAYFQMSKGCTNS 123 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + +++ + S YV A+ + +A K IG +Y K Y AAI Sbjct: 124 SEFADKARDAFTVLIQTFPASEYVTDAQKKLLEIDEIMAEKIFSIGSFYFKEMSYHAAIA 183 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 RF ++ +YS + + A+++ EAY L + Sbjct: 184 RFDELIRDYSRTKLYDAAVSKRAEAYKMLGIDP 216 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 31/76 (40%), Gaps = 8/76 (10%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL--------MDEAREVVSL 252 G++ AA + L +Y D E ++ + AY ++ D+AR+ ++ Sbjct: 77 YDEGKFAAAAGSAEGYLLDYPDGEKMDQVLNIKGNAYFQMSKGCTNSSEFADKARDAFTV 136 Query: 253 IQERYPQGYWARYVET 268 + + +P + + Sbjct: 137 LIQTFPASEYVTDAQK 152 >gi|302036223|ref|YP_003796545.1| hypothetical protein NIDE0853 [Candidatus Nitrospira defluvii] gi|300604287|emb|CBK40619.1| protein of unknown function, TPR-like [Candidatus Nitrospira defluvii] Length = 306 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 73/179 (40%) Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 ++ + ++ +A + ++ + + Y + S+ +M + + D Sbjct: 55 YDPNVIMKRGEAFFDKEEFAEAIVEYQHFLELHRAHQLAVYAQLRLAESHLRMAKSIDRD 114 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + ++ + + S Y A + + LA + +G++Y +R Y+AA Sbjct: 115 PEPIQKAIASFEKLRKEFPGSKYEAQALQRIADCHDWLAQTHLFVGQFYYRRASYLAAAH 174 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 RF ++ +Y D + A EA+ L Y L D A E + L+ E+YP L+ Sbjct: 175 RFDQIMKDYPDKKVAPEALYYLALTYQELGADDWAMEKLQLLAEKYPNSENTGDGRRLL 233 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 22/126 (17%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFV--------------QYSAGKYQQAASLGEE 119 KA F + ++FP + ++L A Y Y AA ++ Sbjct: 119 QKAIASFEKLRKEFPGSKYEAQALQRIADCHDWLAQTHLFVGQFYYRRASYLAAAHRFDQ 178 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+ K Y + ++Y ++ D ++ + + E+Y NS R Sbjct: 179 IMKDYPDKKVAPEALYYLALTYQELGADDW--------AMEKLQLLAEKYPNSENTGDGR 230 Query: 180 FYVTVG 185 + Sbjct: 231 RLLAKL 236 >gi|261416538|ref|YP_003250221.1| outer membrane assembly lipoprotein YfiO [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372994|gb|ACX75739.1| outer membrane assembly lipoprotein YfiO [Fibrobacter succinogenes subsp. succinogenes S85] Length = 293 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 101/239 (42%), Gaps = 5/239 (2%) Query: 13 EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72 L+K L + F + + ++G S++ T + + YE A K + Sbjct: 8 RKKMKNLFKCTLFVPFFLYMATVMGCSTASTKKT-----THTEWCKARYEAAEELFKAKK 62 Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 + +A E + +G ++ + A ++ ++ +A +I +P S + Sbjct: 63 YGRATERLEEILSTCAGSGYMEQAQFLLAESHFNLEQWIEARGEYGSFIVNFPGSPFAET 122 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 + +S M + D+ T ++ R + + N+P +Y + +++A K Sbjct: 123 AEFRKAVSSFNMDYRIDRDESNTTTAMKDFERYLANHPNTPLRDSVNYYYNLLVDRVAEK 182 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 E + GR YL+ + AA+ F+ L Y A+ +EA+ + +AY L + AR+ ++ Sbjct: 183 EFQTGRLYLRMEKPQAAVIYFKEFLETYPKAQRRQEALFLISDAYTDLDQFESARQYLA 241 Score = 37.0 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 2/78 (2%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A E K +Y A R + +L+ + + + E+A L E++ L EAR Sbjct: 49 ARYE--AAEELFKAKKYGRATERLEEILSTCAGSGYMEQAQFLLAESHFNLEQWIEARGE 106 Query: 250 VSLIQERYPQGYWARYVE 267 +P +A E Sbjct: 107 YGSFIVNFPGSPFAETAE 124 >gi|251771637|gb|EES52212.1| DNA uptake lipoprotein-like protein [Leptospirillum ferrodiazotrophum] Length = 234 Score = 161 bits (409), Expect = 8e-38, Method: Composition-based stats. Identities = 43/175 (24%), Positives = 76/175 (43%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 +LL A Y G + +A + ++ +P + Y +GM I + D T Sbjct: 50 ALLDEASRFYFKGDFIEARGEYKRFLELHPTHPLAAFAQYRIGMCDFYQIGGIDRDPSPT 109 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + L ++++ Y +SPYV+ A+ V R + A +G +Y + Y AA RF Sbjct: 110 EKALADFQKVIDEYPDSPYVEKAQKKVAFCRERKARLHFYVGSFYYRTKFYKAAAYRFHS 169 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 +L Y D++ A +A ++A EV+ I + P +AR + L+ Sbjct: 170 ILLKYPDSKIYPRAQYNYAKALFHEKKREKAAEVMRTIVAQSPGSTYARKAQILL 224 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 22/129 (17%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFV--------------QYSAGKYQQAASLGEE 119 KA F + ++P + K+ AF Y Y+ AA Sbjct: 110 EKALADFQKVIDEYPDSPYVEKAQKKVAFCRERKARLHFYVGSFYYRTKFYKAAAYRFHS 169 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + +YP+SK Y +YA+ + ++ + + M IV + S Y + A+ Sbjct: 170 ILLKYPDSKIYPRAQY----NYAKALFH----EKKREKAAEVMRTIVAQSPGSTYARKAQ 221 Query: 180 FYVTVGRNQ 188 + + + Sbjct: 222 ILLDYWKRR 230 Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 20/57 (35%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 + L Y R Y A E+ KA E P + ARK+ ++ + Sbjct: 170 ILLKYPDSKIYPRAQYNYAKALFHEKKREKAAEVMRTIVAQSPGSTYARKAQILLDY 226 >gi|71891967|ref|YP_277697.1| putative lipoprotein [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796073|gb|AAZ40824.1| putative lipoprotein [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 247 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 87/209 (41%), Gaps = 12/209 (5%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y+ A L ++ +A + + ++ L + Y + A + E Sbjct: 36 LYKSAQNKLYNADYKEATQDLINLLNLYLLDPCPQQIYLDLIYAYYKLNDLKSANNYIEH 95 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRD------------VPYDQRATKLMLQYMSRIVE 167 + YP K+ DYV Y+ G+ + D + + R++ Sbjct: 96 FFKLYPNHKHFDYVLYMHGVINMCLDEDNKKLIKYLNINWFDRNPMYACIAFHTFVRLIR 155 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 +Y +S Y A + +N++A E+ I ++Y K+ Y++ I R + +L ++ D + Sbjct: 156 QYPDSQYSLDAYKRLIFLKNRVAEYELSIVKFYSKKHAYISVIARVEKMLYHFPDTQATR 215 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQER 256 +A+ + +AY + L D+A +V +I Sbjct: 216 KALYYMQQAYQNIYLPDQANKVAKIIAAN 244 >gi|329666231|pdb|3QKY|A Chain A, Crystal Structure Of Rhodothermus Marinus Bamd Length = 261 Score = 158 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 89/225 (39%), Gaps = 10/225 (4%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 +E +E+A+ F + + +A EYF A + A Y +Y AA Sbjct: 13 SSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAA 72 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 S E +I Y V Y M Y ++ DQ T+ ++ ++RY N Sbjct: 73 SEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHEL 132 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 V A + R +LA K+ E R Y +R Y AA ++ V Y D A++A+ + Sbjct: 133 VDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAM 192 Query: 235 EAYVALA-------LMDEAREVVSL---IQERYPQGYWARYVETL 269 AY+A A + R V L + + +P R E L Sbjct: 193 RAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPLLRTAEEL 237 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 52/165 (31%), Gaps = 24/165 (14%) Query: 53 DVRYQREVYEKAV--------LFLKEQNFSKAYEYFNQCSRDFPFAGVARKS-------- 96 D R + YE+A+ L + + KA E F +P + + Sbjct: 85 DPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELR 144 Query: 97 ------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY--LVGMSYAQMIRDV 148 +A + Y+ AA E YP++ D + Sbjct: 145 AKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVR 204 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + ++ R+++ + +SP ++ A T R +L E Sbjct: 205 ARQPERYRRAVELYERLLQIFPDSPLLRTAEELYTRARQRLTELE 249 >gi|256257867|ref|ZP_05463403.1| COML, competence lipoprotein [Brucella abortus bv. 9 str. C68] gi|260884157|ref|ZP_05895771.1| competence protein ComL [Brucella abortus bv. 9 str. C68] gi|260873685|gb|EEX80754.1| competence protein ComL [Brucella abortus bv. 9 str. C68] Length = 162 Score = 158 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 45/154 (29%), Positives = 75/154 (48%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K AL + L G ++ V + ++Y + + L +A + Sbjct: 9 VTKTALLSGTIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAK 68 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F R P+ ARK+L+M+AF Y G Y++A S+ + Y T YP S Y YY++G Sbjct: 69 KFAAIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIG 128 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 +SY + I DV DQ A++ + M +++R+ NS Sbjct: 129 LSYFRQIPDVTRDQAASRRAIAAMQEVIDRFPNS 162 >gi|15617006|ref|NP_240219.1| hypothetical protein BU402 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681758|ref|YP_002468144.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682313|ref|YP_002468697.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471460|ref|ZP_05635459.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|18202269|sp|P57482|Y402_BUCAI RecName: Full=UPF0169 protein BU402 gi|25403614|pir||A84977 hypothetical protein [imported] - Buchnera sp. (strain APS) gi|10039071|dbj|BAB13105.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219622046|gb|ACL30202.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624601|gb|ACL30756.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086139|gb|ADP66221.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086712|gb|ADP66793.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087297|gb|ADP67377.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087808|gb|ADP67887.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 246 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 11/208 (5%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-RKSLLMSAFVQYSAGKYQQAASLGE 118 +YEK+ L+++NF A + ++ A ++ K + + Y + QA E Sbjct: 36 LYEKSNKELRKENFDNAISILEKIKKNNNTANISNDKIQIDLIYAYYKILNFDQARKNIE 95 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQYMSRIVER 168 E++ YP N+DYV Y+ + + I D K + + + Sbjct: 96 EFMYFYPNHPNIDYVVYIQCLISMSLDKNRFFSVFPINYYKNDYFYAKNAFFQLKYFIYQ 155 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y S YV A+ + +N+L+ ++ I ++Y EY+A I R + +L YS+ A + Sbjct: 156 YPKSRYVVNAKKNLIYIKNRLSEHDLSILKFYFFHKEYIAVINRGEEMLQRYSETPSARK 215 Query: 229 AMARLVEAYVALALMDEAREVVSLIQER 256 A+ + ++Y AL + D A+++ +I Sbjct: 216 ALIYIEKSYYALKIFDTAKKISKIILLN 243 >gi|213420844|ref|ZP_03353910.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 137 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 7/130 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + ++ P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV 148 ++ + V Sbjct: 114 LTNMALDDSV 123 >gi|21672663|ref|NP_660730.1| hypothetical protein BUsg389 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25009590|sp|Q8K9E8|Y389_BUCAP RecName: Full=UPF0169 protein BUsg_389 gi|21623300|gb|AAM67941.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 243 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 44/207 (21%), Positives = 92/207 (44%), Gaps = 10/207 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y+K LKE+NF KA + + K + + Y + A EE Sbjct: 35 LYQKCRKELKEKNFYKAIFDLKKIENNHAINFNNDKIKMNLIYAYYKVSDFNTAEKNIEE 94 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERY 169 +I +YP+ N+DY++Y+ + + + + ++ + + V Y Sbjct: 95 FIKKYPKHLNIDYIFYIQSLINISLDKKIFHNVFPIQIYKSNPIYAIKAFFQLKKFVYNY 154 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 NS YV A+ + + +L+ ++ I +YY +Y+A I R + +L Y + A + Sbjct: 155 PNSIYVINAKKDLFYLKKRLSEHDLTILKYYFYHKKYIAVINRGEEILQKYPETSAAIDT 214 Query: 230 MARLVEAYVALALMDEAREVVSLIQER 256 + + ++++AL + D A+++ +I Sbjct: 215 LKYMEKSFLALKIFDTAKKISKIILLN 241 >gi|213619386|ref|ZP_03373212.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 132 Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 49/130 (37%), Gaps = 7/130 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLASCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +PF +++ L + Y A + + ++ P N+DYV Y+ G Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113 Query: 139 MSYAQMIRDV 148 ++ + V Sbjct: 114 LTNMALDDSV 123 >gi|325294284|ref|YP_004280798.1| outer membrane assembly lipoprotein YfiO [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064732|gb|ADY72739.1| outer membrane assembly lipoprotein YfiO [Desulfurobacterium thermolithotrophum DSM 11699] Length = 316 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 16/232 (6%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CS 84 I F + + FL E+ R +Y++ + KE ++ K+ E + Sbjct: 5 IIFFVCLLFLFSCEKIP------------RTAEGLYQEGMKAAKEGDWGKSTEMLEKALE 52 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + P + + + A ++ ++ AA EE++ YP S + +G+SY + Sbjct: 53 GELPPSK-QELAKITLANSYFNDQDFENAALNYEEFLDLYPASPRAKDALFRLGISYLNL 111 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 ++ +DQ TK ++ + V+ + N P V+ A+ Y + R LA EV IG Y Sbjct: 112 VKGPQWDQTFTKKAIRAFEKFVKEFPNDPRVEKAKIYKNIARKILAENEVYIGGTYDMLH 171 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 ++ A+I R+++V Y D E + + AY + +A+E + ++ + Sbjct: 172 KFTASINRYKIVKEKYRDVESLDRIDYLIGRAYFFTDI--QAKEEIDRLKRQ 221 >gi|46202602|ref|ZP_00052938.2| COG4105: DNA uptake lipoprotein [Magnetospirillum magnetotacticum MS-1] Length = 164 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 37/111 (33%), Positives = 61/111 (54%) Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++ + +V+R+ +S Y + AR + + R+ LA KE+ IGRYY G ++AA+ RF++V Sbjct: 1 MKILHEVVDRFPSSVYARDARLKIDLARDHLAGKEMNIGRYYQNLGHHLAALNRFKMVAE 60 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 Y H EA+ R+VE Y AL L EA +++ +P W + Sbjct: 61 QYQTTTHVPEALYRMVELYTALGLDQEAARAAAVLGHNFPGSDWYEDAYAM 111 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 16/120 (13%), Positives = 36/120 (30%), Gaps = 26/120 (21%) Query: 78 EYFNQCSRDFPFAGVARKSLL-------------MSAFVQYSAGKYQQAASLGEEY---I 121 + ++ FP + AR + L M+ Y + + Sbjct: 2 KILHEVVDRFPSSVYARDARLKIDLARDHLAGKEMNIGRYYQN--LGHHLAALNRFKMVA 59 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 QY + +V Y + ++ + DQ A + + + + S + + A Sbjct: 60 EQYQTTTHVPEALYRM----VELYTALGLDQEAARAA----AVLGHNFPGSDWYEDAYAM 111 >gi|91202470|emb|CAJ72109.1| hypothetical protein kustd1364 [Candidatus Kuenenia stuttgartiensis] Length = 308 Score = 144 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 9/196 (4%) Query: 45 DVYLDSVTDVRYQREVYEK------AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 D L + +EV+EK A + + E + A F + + P +A +S + Sbjct: 107 DTVLREYPGTKRTKEVHEKVFQVGIAQMEMDE---NAAIRVFEKIIENHPMGPIAPESQI 163 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A + G Y+ A ++++ YP ++ + YV Y + +S + + Sbjct: 164 KIADCYFKLGYYEDAVDAYKKFMESYPRNEWIPYVQYQIPLSKFYFEKQQERNYGLLVSA 223 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + + + YV+ A + R A +E EIG +YL+R +A F+ V+ Sbjct: 224 REGFEEYLVTNPHGVYVEDASRMIEEIRVIEARREFEIGEFYLRRKTPSSASIYFKYVIK 283 Query: 219 NYSDAEHAEEAMARLV 234 ++ D AE AM RL Sbjct: 284 DFPDTIWAERAMERLE 299 Score = 92.1 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 72/209 (34%), Gaps = 26/209 (12%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 L + F I+ W DV + Y+ A+ L EQ + A + F Sbjct: 11 IVLAVTFLISTASYGKWVWNKDTGWMQPPTGDVGSPEQRYKNALFMLVEQKYVSAIKEFK 70 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY---YLVG 138 +P + A S + + Y G Y +A + + +YP +K V+ + VG Sbjct: 71 LIIDGYPDSAYAELSQINIGWAYYLNGDYNRALKAYDTVLREYPGTKRTKEVHEKVFQVG 130 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 ++ +M + ++ +I+E + P ++ + Sbjct: 131 IAQMEMDEN---------AAIRVFEKIIENHPMGPIAPESQIKIADC------------- 168 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y K G Y A+ ++ + +Y E Sbjct: 169 -YFKLGYYEDAVDAYKKFMESYPRNEWIP 196 >gi|325955604|ref|YP_004239264.1| outer membrane assembly lipoprotein YfiO [Weeksella virosa DSM 16922] gi|323438222|gb|ADX68686.1| outer membrane assembly lipoprotein YfiO [Weeksella virosa DSM 16922] Length = 296 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 58/255 (22%), Positives = 99/255 (38%), Gaps = 12/255 (4%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 +F +++ FLV S Y ++ + E++ A ++ + A E +N+ S Sbjct: 1 MFKKVSLTFLVATMLTSCNTQYNKAM-KSSDKDEIFSIANTLFEQGKYDLALELYNRIST 59 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 F A A Y+ Y+ + L + + YP + YL SY + Sbjct: 60 SFVGTEKAADIAYNIAQANYNDENYRLSGHLFKNFAGTYPLDHRAEDALYLSAFSYYKDS 119 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 DQ +T + M + Y S +V A Y+ R +L K EI R Y K + Sbjct: 120 PRYNLDQTSTYNAIDEMQNFINTYPESEHVAQANEYIDELRGKLEKKAFEIARVYYKTMK 179 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM-----------DEAREVVSLIQ 254 Y AA F ++ ++ D+++ EEAM + + LA+ EA L Sbjct: 180 YKAAGVAFDNMVDDFPDSKYREEAMLYSLRSKAELAMNFSRLEHKELRLQEALTQYKLFS 239 Query: 255 ERYPQGYWARYVETL 269 YP+ + E + Sbjct: 240 RLYPESSFKSEAEKI 254 >gi|289806131|ref|ZP_06536760.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 138 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 10/138 (7%) Query: 133 VYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 V Y+ G++ + V D + + S++V Y NS Y A + Sbjct: 1 VMYMRGLTNMALDDSVLQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRL 60 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 +++LA E + YY RG +VA + R + +L NY D + +A+ + AY + L Sbjct: 61 VFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQL 120 Query: 243 MDEAREVVSLIQERYPQG 260 +A +V +I Sbjct: 121 NAQADKVAKIIAANSKNT 138 >gi|291288282|ref|YP_003505098.1| outer membrane assembly lipoprotein YfiO [Denitrovibrio acetiphilus DSM 12809] gi|290885442|gb|ADD69142.1| outer membrane assembly lipoprotein YfiO [Denitrovibrio acetiphilus DSM 12809] Length = 259 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 93/239 (38%), Gaps = 10/239 (4%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + I V G +++ + E + + + K+ N+ KA YF Sbjct: 5 VLLIMICVLTFAGCAKKA---------PNQMTAEESMKTGMTYFKKGNYEKAVTYFENTL 55 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + +A K+ L A + KY +A E ++ Y E+++ + +G+S+ Sbjct: 56 MEAETPEMAAKAQLFLADSYFLDKKYVEAIPAYELFLEIYGETEDANTAMLRLGLSHYAQ 115 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 I + D A + L +++ ++ + R+ LA +E+ + ++Y + Sbjct: 116 IDTIDRDMSAAEGALNAFTKLRDKSPAFAREFELNKKIVELRSMLAERELYVAKFYFRIK 175 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYW 262 E +A R + +++NYSD +EA+ EA + + + P + Sbjct: 176 EPDSAEGRLKYLISNYSDTASYDEALYMYANWLADKKGREAEAVKYYRKLIDERPNSKY 234 >gi|320105768|ref|YP_004181358.1| outer membrane assembly lipoprotein YfiO [Terriglobus saanensis SP1PR4] gi|319924289|gb|ADV81364.1| outer membrane assembly lipoprotein YfiO [Terriglobus saanensis SP1PR4] Length = 596 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 91/215 (42%), Gaps = 10/215 (4%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S+D L + + +++Y+KA+ K + A +P + ++ L A Sbjct: 109 SKDNPLAGLDSTQPDKQLYDKALASTKRGRYDVARLELQTLLATYPDSEYMMRAKLAFAD 168 Query: 103 VQYSAG---KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y G QA + +++IT +P + VG Y + + D Sbjct: 169 SWYREGGTAALAQAETEYKDFITFFPNAPEAAEAQMRVGDIYFKQMDTPDRDYTKAVHAQ 228 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 + +++++ +S + GA+ + + LA +E I +Y R + A+I R+Q V+ Sbjct: 229 EEYRTMLQQFPDSTLIPGAKQRLREVQEVLATRETNIAAFYAGRENWPASIARYQTVVDT 288 Query: 220 YSDAEHAEEAMARLVEAYVA-------LALMDEAR 247 Y H++EA+ L +A+ A + L + A+ Sbjct: 289 YPIFSHSDEALIGLGDAFAAEARMVRVMKLPEGAK 323 >gi|262197816|ref|YP_003269025.1| outer membrane assembly lipoprotein YfiO [Haliangium ochraceum DSM 14365] gi|262081163|gb|ACY17132.1| outer membrane assembly lipoprotein YfiO [Haliangium ochraceum DSM 14365] Length = 261 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 49/228 (21%), Positives = 102/228 (44%), Gaps = 10/228 (4%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 + ++ Y K +L L+E+++ A +YF + FP++ A + L A Sbjct: 18 GCSKAPPGTAVYATTAQQNYSKGMLELEEKDWIAAVKYFAFVKQRFPYSKYAVLAELRMA 77 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNV--DYVYYLVGMSYAQMIRD--------VPYD 151 ++ A Y QA + +I +P + V Y + VG +Y +++ D D Sbjct: 78 DAEFGAEHYLQAVDAFKLFIKFHPTHEQVVDGYAAFRVGAAYYELLPDDMWILPPSYEKD 137 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 +T + ++ +++Y +S Y + A+ + LAA E + ++Y R + + + Sbjct: 138 PSSTYDAERELATFLKKYPDSAYHEEAKEMLAAVHAHLAAHEWYVAKFYWDREKPMGTVL 197 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + +L Y+ +A+ L AY+ + + + ARE + E++P Sbjct: 198 RLRRLLDRYAGTRFDGDALWLLGSAYMKVDMPERAREAWQTLIEQHPD 245 >gi|225874148|ref|YP_002755607.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC 51196] gi|225791664|gb|ACO31754.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC 51196] Length = 549 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 79/202 (39%), Gaps = 8/202 (3%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG---KY 110 + E++ KA+ +++ + A +P + A ++ L A + G Sbjct: 50 KQPDAELFNKAMKSMRKGRYDVARLELETLLNTYPDSEYAMRAKLAVADSWFKEGGTAAL 109 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +QA + +++IT +P + VG Y + D Q ++E++ Sbjct: 110 EQAEAEYKDFITFFPNTPEAAEAQMKVGDIYYMQMERPDRDPTNAVAAEQQYRTMIEQFP 169 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 +S + A+ + + LA + E+G YY ++ AI R + V Y + + Sbjct: 170 DSTLIPEAKQKLRNVQEVLAQAQFEVGTYYSTTEDWPGAIARLETVADLYPLYSKVDADL 229 Query: 231 ARLVEAYVALALMDEAREVVSL 252 + + Y +EA+ V + Sbjct: 230 LLMGDDY-----ANEAQAVSRM 246 Score = 35.5 bits (81), Expect = 8.6, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 33/103 (32%), Gaps = 13/103 (12%) Query: 95 KSLLMSAFVQYSA-GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 ++ YS + A + E YP VD L+G YA + V + Sbjct: 190 QAQFEVG-TYYSTTEDWPGAIARLETVADLYPLYSKVDADLLLMGDDYANEAQAVSRMRM 248 Query: 154 ATKL-----------MLQYMSRIVERYTNSPYVKGARFYVTVG 185 K S IVE+Y SP + A+ + Sbjct: 249 PAKAKTELLNYYNGRAADAWSAIVEKYPMSPNAENAKDRLIAM 291 >gi|228472533|ref|ZP_04057293.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga gingivalis ATCC 33624] gi|228275946|gb|EEK14702.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga gingivalis ATCC 33624] Length = 264 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 51/221 (23%), Positives = 84/221 (38%), Gaps = 10/221 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A + +++++ + + + +L M A Y KY A E + Sbjct: 35 YKVAKALYDKGDYNRSMRLWEKVVGYYIGRPQGEDALYMYADSFYKRKKYLLAGYQYERF 94 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + YP S+ + V +L G DQ AT L + ++RY N Y++ A Sbjct: 95 LKNYPRSEKAEEVLFLQGKCNFLESPKYSLDQDATYKALDQLQEYIDRYPNGAYLREANN 154 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 V N+L K EI + Y K +Y AAI F L + EEAM + + L Sbjct: 155 MVLELLNKLQHKSFEIAKGYDKIRDYQAAIKSFDNFLVENPGSTFREEAMYYRLHSAYEL 214 Query: 241 ALM----------DEAREVVSLIQERYPQGYWARYVETLVK 271 A +EA+ L YP+ + + + Sbjct: 215 AKNSIKSKEKQRFEEAKSYYELFSRTYPESNFMTKANRMYQ 255 Score = 42.4 bits (99), Expect = 0.075, Method: Composition-based stats. Identities = 17/143 (11%), Positives = 41/143 (28%), Gaps = 16/143 (11%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKY 110 L + KA + + +P R++ A Y Sbjct: 121 KYSLDQDATYKALDQLQEYIDRYPNGAYLREANNMVLELLNKLQHKSFEIAKGYDKIRDY 180 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV--PYDQRATKLMLQYMSRIVER 168 Q A + ++ + P S + Y S ++ ++ +++ + Y Sbjct: 181 QAAIKSFDNFLVENPGSTFREEAMYYRLHSAYELAKNSIKSKEKQRFEEAKSYYELFSRT 240 Query: 169 YTNSPYVKGARFYVTVGRNQLAA 191 Y S ++ A +++ Sbjct: 241 YPESNFMTKANRMYQDILKKISE 263 >gi|256257866|ref|ZP_05463402.1| COML, competence lipoprotein [Brucella abortus bv. 9 str. C68] gi|260884156|ref|ZP_05895770.1| competence protein ComL [Brucella abortus bv. 9 str. C68] gi|260873684|gb|EEX80753.1| competence protein ComL [Brucella abortus bv. 9 str. C68] Length = 125 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 45/99 (45%), Positives = 64/99 (64%) Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 Y A+ + V R+QLA KE++IGRYYL+R EY+AAI RF+ V+ YS+ EEA+AR Sbjct: 1 EYTDDAKTKIRVARDQLAGKEMQIGRYYLERKEYLAAIKRFRGVVEEYSNTRQVEEALAR 60 Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 LVEAY AL L EA+ S++ + +P W + L++ Sbjct: 61 LVEAYYALGLTSEAQMAASVLGKNFPDSQWYKDSYKLLQ 99 >gi|326334355|ref|ZP_08200568.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693439|gb|EGD35365.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 266 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 93/264 (35%), Gaps = 18/264 (6%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + + I I++ F E Q + + Y+ A ++ +++++ Sbjct: 2 NMKGKVIAIMLIISLAFSACGEYQKALKTEDYELK--------YKVAKSLYEKGDYARSM 53 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + + ++L M A Y KY AA E + YP S+ + V +L Sbjct: 54 RLLEKVVGFYIGRPQGEEALYMYADSYYKRKKYLLAAYQYERFTKNYPRSEKAEQVLFLQ 113 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 G Y DQ T L + ++RY NS ++ A V +L K EI Sbjct: 114 GKCYFLESPKYSLDQEGTYKALDALQEYIDRYPNSENLREANNMVLELLTKLQRKSFEIA 173 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEAR 247 + Y K +Y AAI F L + EEA+ + LA +EA+ Sbjct: 174 KGYDKIRDYQAAIKSFDNFLIENPGSVFREEALYYRFHSAYELAKNSVKSKEKQRFEEAK 233 Query: 248 EVVSLIQERYPQGYWARYVETLVK 271 +P + + + + Sbjct: 234 NQYENFVRIFPDSDFKGRADKMYQ 257 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 24/196 (12%), Positives = 57/196 (29%), Gaps = 61/196 (31%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-KYQQ--- 112 + +Y A + K + + A + + ++++P + A + L + + KY Sbjct: 70 EEALYMYADSYYKRKKYLLAAYQYERFTKNYPRSEKAEQVLFLQGKCYFLESPKYSLDQE 129 Query: 113 ----AASLGEEYITQYPESKNV-----------------------------DY------- 132 A +EYI +YP S+N+ DY Sbjct: 130 GTYKALDALQEYIDRYPNSENLREANNMVLELLTKLQRKSFEIAKGYDKIRDYQAAIKSF 189 Query: 133 ---------------VYYLVGMSYAQMIRDV--PYDQRATKLMLQYMSRIVERYTNSPYV 175 Y S ++ ++ +++ + V + +S + Sbjct: 190 DNFLIENPGSVFREEALYYRFHSAYELAKNSVKSKEKQRFEEAKNQYENFVRIFPDSDFK 249 Query: 176 KGARFYVTVGRNQLAA 191 A +++ Sbjct: 250 GRADKMYQDILKKISE 265 >gi|305667245|ref|YP_003863532.1| putative lipoprotein [Maribacter sp. HTCC2170] gi|88708179|gb|EAR00417.1| conserved hypothetical lipoprotein [Maribacter sp. HTCC2170] Length = 282 Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 101/269 (37%), Gaps = 25/269 (9%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 ++ K + ++ + +++ + Y+ A + +E+++ +A Sbjct: 4 KMRKLLSFLAIAVVLSSCNEYQKALKNEDVKAK----------YDLAQKYYEEEDYKRAN 53 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 F Q + + + + A + Y A E +I YP+S+ V +L Sbjct: 54 RLFEQIAPKYVGKPQGERVMFFFANTYFETKDYNTAGYQFERFIKSYPKSEKVPQASFLG 113 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 SY Q+ DQ T L + + + +S Y A + K EIG Sbjct: 114 AKSYFQLSPLHSLDQTDTDKALIKLQSFINTFPDSEYFDEANKMAKELTTKKERKAFEIG 173 Query: 198 RYYLKRGEY-----VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM--------- 243 + + K G + A+ F +++Y + + EEA+ EA + Sbjct: 174 KQFNKLGRFDYSFLTPAMAAFDNFISDYPGSIYREEALYLKFEAATEFGMNSFSRLKPER 233 Query: 244 -DEAREVVSLIQERYPQGYWARYVETLVK 271 +EA+ S+++++YP+ + L+K Sbjct: 234 LEEAKTAYSVLKKQYPETKFEDDAAKLLK 262 Score = 42.0 bits (98), Expect = 0.087, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 2/82 (2%) Query: 113 AASLGEEYITQYPESKNVDYVYYLV--GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + + +I+ YP S + YL + M + S + ++Y Sbjct: 190 AMAAFDNFISDYPGSIYREEALYLKFEAATEFGMNSFSRLKPERLEEAKTAYSVLKKQYP 249 Query: 171 NSPYVKGARFYVTVGRNQLAAK 192 + + A + +L K Sbjct: 250 ETKFEDDAAKLLKKIDKELGNK 271 >gi|319789104|ref|YP_004150737.1| outer membrane assembly lipoprotein YfiO [Thermovibrio ammonificans HB-1] gi|317113606|gb|ADU96096.1| outer membrane assembly lipoprotein YfiO [Thermovibrio ammonificans HB-1] Length = 316 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 45/202 (22%), Positives = 85/202 (42%), Gaps = 4/202 (1%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 R Y + + ++++ + + + P + + A ++ G Y+ A Sbjct: 22 RTAEGQYREGIKAAAQEDWGRTIFLLKKALQGNLP-PKEQEFAKIALADAYFNEGDYENA 80 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 A EE++ YP S + +G+ Y +++ +D K R ++ Y N P Sbjct: 81 ALNYEEFLQLYPASPRAKDALFRLGVCYLNLVKGPQWDVTFAKRAYNIFQRFIKEYPNDP 140 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 VK A+ Y + R LA E+ IG Y ++ A+I R+ V + D E + + L Sbjct: 141 RVKKAKLYAELARKILAEHEIYIGGTYDMLRKFTASIQRYTDVERKFKDVEAPDRLLYLL 200 Query: 234 VEAYVALALMDEAREVVSLIQE 255 AY L +A+E + ++E Sbjct: 201 GRAYYYTPL--QAKEEIERLKE 220 >gi|322436942|ref|YP_004219154.1| outer membrane assembly lipoprotein YfiO [Acidobacterium sp. MP5ACTX9] gi|321164669|gb|ADW70374.1| outer membrane assembly lipoprotein YfiO [Acidobacterium sp. MP5ACTX9] Length = 601 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 77/187 (41%), Gaps = 3/187 (1%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ---Q 112 +++Y+KA +++ ++ A +P + ++ L A Y G Q Sbjct: 130 PDKQLYDKAYAAIQKGHYDVARLDLQTMLNTYPDSQYQMRAKLAIADSWYKEGGTAALTQ 189 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A S ++ +P + +G Y + + D + + R++ Y +S Sbjct: 190 AESEYADFRVFFPNAPEAAEAQMRIGDIYFRQMDRPDRDHAKSIHAEEEYRRMLTDYPDS 249 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 V A+ + + LA ++ +I +Y R + A I R+Q V+ Y H ++A+ Sbjct: 250 TLVPQAKQRLRDVQEVLATRDADIAAFYATRENWAAVIARYQTVVDTYPLYSHMDDALIG 309 Query: 233 LVEAYVA 239 L +AY A Sbjct: 310 LGDAYEA 316 >gi|94967104|ref|YP_589152.1| DNA uptake lipoprotein-like [Candidatus Koribacter versatilis Ellin345] gi|94549154|gb|ABF39078.1| DNA uptake lipoprotein-like protein [Candidatus Koribacter versatilis Ellin345] Length = 497 Score = 132 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 100/245 (40%), Gaps = 8/245 (3%) Query: 19 LYKFAL-TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 +++ AL T +A G + + + ++ + + +Y++A+ +K F A Sbjct: 1 MFRRALITAAIGLATLAATGCHNKKVSN-PIANIDSKQPDKVLYDRAMDAMKHNKFDVAR 59 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ---QAASLGEEYITQYPES-KN-VDY 132 +P + ++ L Y+ G QA + ++I + +S N Sbjct: 60 VTLQTLINTYPDSEFIARAKLSIGDSWYAEGGSAAMTQAENEYRDFIVFFGQSMPNESAE 119 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 + + + D K + +++ ++ +SP V A+ + + LA + Sbjct: 120 AQMKIAGIHYDEMEKPDRDYTHAKRAEEEYRQMILQFPDSPLVPKAKTRLLQVQEILAQR 179 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL-ALMDEAREVVS 251 E IG++Y+ R +Y AA+ R Q + Y ++EA+ L EA+ A L+ +A + Sbjct: 180 EFLIGKFYIMREDYPAAVARLQTLSDTYPLFSGSDEALFLLGEAHQAEANLVRKASRLAE 239 Query: 252 LIQER 256 + Sbjct: 240 TQRAN 244 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 50/146 (34%), Gaps = 29/146 (19%) Query: 70 EQNF---SKAYEYFNQCSRDFPFAGVARKS-----LLMSAFV---------QYSAGKYQQ 112 ++++ +A E + Q FP + + K+ + Y Sbjct: 136 DRDYTHAKRAEEEYRQMILQFPDSPLVPKAKTRLLQVQEILAQREFLIGKFYIMREDYPA 195 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPY---DQRAT------KLMLQ 160 A + + YP D +L+G ++ A ++R QRA K + Sbjct: 196 AVARLQTLSDTYPLFSGSDEALFLLGEAHQAEANLVRKASRLAETQRANAIAGFEKDAVA 255 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGR 186 S+I+ RY + V+ A+ + Sbjct: 256 AYSKIITRYPATDRVEAAKKKLAELH 281 >gi|114321550|ref|YP_743233.1| DNA uptake lipoprotein-like protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227944|gb|ABI57743.1| DNA uptake lipoprotein-like protein [Alkalilimnicola ehrlichii MLHE-1] Length = 245 Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 49/228 (21%), Positives = 85/228 (37%), Gaps = 9/228 (3%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G S D E Y V L E + + A E F + A + Sbjct: 17 SGCATTSGPDDRR-----AGTAAEQYRAGVAALDEDDRAAARERFEALIERHATSRHAGQ 71 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----PYD 151 + A++ Y AG+ A +P+ ++ Y Y+ M+ Q D D Sbjct: 72 ARAELAWLHYRAGELDAAREQASRMAETHPDHPSLPYALYVAAMAAEQQWEDSLARGEPD 131 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 QR + +V+ + A ++ R +A E+++ R L+ G A+ Sbjct: 132 QRLARRAFADYRAVVDLDAEDRHAGLALEAMSALREAIARHELDLARTRLEDGAADEALD 191 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + V +Y +E +AMA + A +L D+A EV +++ P Sbjct: 192 RARYVGEHYPRSETLGDAMALQINALESLGEQDKAGEVRRMLRLHQPD 239 >gi|291280327|ref|YP_003497162.1| hypothetical protein DEFDS_1955 [Deferribacter desulfuricans SSM1] gi|290755029|dbj|BAI81406.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 252 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 98/236 (41%), Gaps = 12/236 (5%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 Q+ K ++ ++ + G +++ D+ T +++ + + + + + KA Sbjct: 4 QMKKVLVSFIITLLLFACAG-----KKEINKDAAT-------YFKEGLTYFQNKKYEKAA 51 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 F + + +A K+ L A Y KY A + + Y+ Y + + Sbjct: 52 AAFEEALKKADTPELAAKAQLFLADSYYLDEKYDDAIAAYKSYLELYENQPDAKRALLRL 111 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 G+SY M++ + DQ T+ ++ +Y + +N LA K+ + Sbjct: 112 GLSYYAMLQPIDRDQSYTREAYNTFLKLNAKYPEFSKKYNIPAKLRKLKNMLAEKDFYVA 171 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 ++Y++ GE AAI R + +L Y D + EA + + + D+A V+S + Sbjct: 172 KFYVRIGEDKAAIVRLEKILKEYKDTKVYPEAALLYAKVLINIKKPDKAVSVLSQL 227 >gi|301168517|emb|CBW28107.1| putative comtepence-related protein [Bacteriovorax marinus SJ] Length = 245 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 90/218 (41%), Gaps = 2/218 (0%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 ++++A + + + A E N +P++ A + L+ A V + Sbjct: 18 PRPEGKTEAEVLFKEAQDLINDSRYILATEKLNTLRSQYPYSFYATHAELLQADVLFKQE 77 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD-VPYDQRATKLMLQYMSRIVE 167 Y +AA+ + +P+ K YV + + S+ I D D A ++Y ++ Sbjct: 78 NYVEAAAAYILFKDFHPKHKKKAYVIWKIAESFYAQIPDTFDRDLSAAHEAVKYYQELLN 137 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE-HA 226 +++S Y KG+ + + + + KE IG +Y K + AA R+ ++ + Sbjct: 138 FHSDSEYSKGSIDKIKLAQGMILDKERYIGDFYYKTNVFDAARYRYLSIIDRFKSDPMLL 197 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 +M R+VE+ L + + + +E+ Q + Sbjct: 198 AHSMIRVVESSHKLKDKESCTKYFNQFKEQIEQSNLKK 235 >gi|116622298|ref|YP_824454.1| DNA uptake lipoprotein-like protein [Candidatus Solibacter usitatus Ellin6076] gi|116225460|gb|ABJ84169.1| DNA uptake lipoprotein-like protein [Candidatus Solibacter usitatus Ellin6076] Length = 478 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 100/265 (37%), Gaps = 25/265 (9%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 F T L G + + + + + +++KA+ ++ F A Sbjct: 6 FRFTAAMVAVAVLLSGCGIRRKKYDNPITKDTQQPDKVLFDKAINDIEHSRFEIARLLLQ 65 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGK---YQQAASLGEEYITQYPESK---------- 128 + + K+ L A + G QA + +++I YP + Sbjct: 66 NLINTYDTSEYLAKAKLAIADAWFREGGAHGLAQAEAEYKDFILFYPAMEEAAEAQEKVC 125 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + + + D + L Q +++ ++ NS + A+ + + Sbjct: 126 DI----------HYKQMDKADRDPKHALLAEQECKQLILQFPNSKFAPLAQQKLRDIQEV 175 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA E +G Y K+G + AA RFQ + ++ A+EA+ +L ++Y + E+++ Sbjct: 176 LADSEFRVGTLYQKKGSFPAASNRFQALADHFPLYSKADEALWQLADSYHRMGDRFESQQ 235 Query: 249 VVS--LIQERYPQGYWARYVETLVK 271 V + I + YP A ++ Sbjct: 236 VTAYQRIVKDYPLSIHAEDARAQLE 260 Score = 35.5 bits (81), Expect = 7.8, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 36/120 (30%), Gaps = 28/120 (23%) Query: 86 DFPFAGVARKSLLMS-------AFV-------QYSAGKYQQA----ASLGEEYITQYPES 127 FP + A + A G + A +L + + P Sbjct: 155 QFPNSKFAPLAQQKLRDIQEVLADSEFRVGTLYQKKGSFPAASNRFQALADHF----PLY 210 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 D + + SY +M Q + RIV+ Y S + + AR + V + Sbjct: 211 SKADEALWQLADSYHRMGDRFESQQ------VTAYQRIVKDYPLSIHAEDARAQLEVMKR 264 >gi|213622690|ref|ZP_03375473.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 116 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 51/116 (43%) Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + D + + S++V Y NS Y A + +++LA E + YY RG Sbjct: 1 VDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARG 60 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 +VA + R + +L NY D + +A+ + AY + L +A +V +I Sbjct: 61 AWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADKVAKIIAANSKNT 116 >gi|83815586|ref|YP_446179.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855] gi|294508105|ref|YP_003572163.1| Conserved hypothetical protein containing tetratricopeptide repeat domain [Salinibacter ruber M8] gi|83756980|gb|ABC45093.1| tetratricopeptide repeat domain protein [Salinibacter ruber DSM 13855] gi|294344433|emb|CBH25211.1| Conserved hypothetical protein containing tetratricopeptide repeat domain [Salinibacter ruber M8] Length = 284 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 85/240 (35%), Gaps = 14/240 (5%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 F + F++ LVG + E Y+K V ++E + +A +F Sbjct: 6 FVPVLLFALLGA-LVGCSGGTE--------LTYSGPEEAYKKGVAEMEEGDHQQAIRFFR 56 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 A + A Q K+ AA+ + + Y + + + SY Sbjct: 57 AVFEYGRGNEWAPDARFKLAMAQRGLNKHLVAANEFQRFTQLYRNDELLPRAEFERANSY 116 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 DQ ++ + ++R+ N V A + R +LA K+ E GR Y Sbjct: 117 YLRSPSYRLDQSDSEQAISLFRLFIDRHPNHELVPEAEEKINELRAKLARKKYEAGRLYE 176 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----DEAREVVSLIQERY 257 +R + AA ++ Y D A++A+ V Y+ A +A I E Y Sbjct: 177 QRDMWQAATTVYERAFDQYPDTPWADDALLGAVRTYIRYADRSVESKQAERYQKAI-ENY 235 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 10/83 (12%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS--AFVQY------- 105 + R+ YE L+ + + A + + +P A +LL + +++Y Sbjct: 163 KLARKKYEAGRLYEQRDMWQAATTVYERAFDQYPDTPWADDALLGAVRTYIRYADRSVES 222 Query: 106 -SAGKYQQAASLGEEYITQYPES 127 A +YQ+A +PES Sbjct: 223 KQAERYQKAIENYNRLTQLFPES 245 >gi|213423524|ref|ZP_03356504.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 112 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 50/112 (44%) Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 D + + S++V Y NS Y A + +++LA E + YY RG +VA Sbjct: 1 DRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVA 60 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + R + +L NY D + +A+ + AY + L +A +V +I Sbjct: 61 VVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADKVAKIIAANSKNT 112 >gi|182415413|ref|YP_001820479.1| TPR repeat-containing protein [Opitutus terrae PB90-1] gi|177842627|gb|ACB76879.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1] Length = 345 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 1/165 (0%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N S+A +YF + P++ A +L+ A A + ++A + I QYP+S Sbjct: 160 NRSRAIDYFEIIVQTAPYSDYAPLALMNKARGHLRARETEEAIDALDRMINQYPQSLLAP 219 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Y + ++A ++ YDQ +TK + Y + + N P V A + + LA Sbjct: 220 DAYLKLAQTHALLVEGPNYDQGSTKEAITYYEDFLILFPNDPNVPTAAKGLDEMKQVLAE 279 Query: 192 KEVEIGRYY-LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 ++ IG +Y KR Y AA + + +Y D+ A+ A +L E Sbjct: 280 SKIRIGDFYFYKRDNYTAARVFYNEAITSYPDSPVAQRARTKLAE 324 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 52/157 (33%), Gaps = 19/157 (12%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ- 104 + + + KA L+ + +A + ++ +P + +A + L A Sbjct: 171 IVQTAPYSDYAPLALMNKARGHLRARETEEAIDALDRMINQYPQSLLAPDAYLKLAQTHA 230 Query: 105 -------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---------RDV 148 Y G ++A + E+++ +P NV G+ + + Sbjct: 231 LLVEGPNYDQGSTKEAITYYEDFLILFPNDPNVPTAA--KGLDEMKQVLAESKIRIGDFY 288 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 Y + + + + Y +SP + AR + Sbjct: 289 FYKRDNYTAARVFYNEAITSYPDSPVAQRARTKLAEV 325 >gi|145641511|ref|ZP_01797089.1| conserved hypothetical lipoprotein [Haemophilus influenzae R3021] gi|145273802|gb|EDK13670.1| conserved hypothetical lipoprotein [Haemophilus influenzae 22.4-21] Length = 124 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 45/101 (44%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + +V + NSPY + A + ++ LA E+EI ++Y KR +VA R Sbjct: 2 RTAFSNFQNLVRVFPNSPYAQDALARMAYIKDALARHELEIAKFYAKRKAWVAVANRVVG 61 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +L Y D + E + + EAY + L A + +I Sbjct: 62 MLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 102 >gi|325281824|ref|YP_004254366.1| outer membrane assembly lipoprotein YfiO [Odoribacter splanchnicus DSM 20712] gi|324313633|gb|ADY34186.1| outer membrane assembly lipoprotein YfiO [Odoribacter splanchnicus DSM 20712] Length = 266 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 10/220 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 VY+KA+ + + ++ +A + F A+ AF Y+ YQ A+ L ++ Sbjct: 32 VYKKAIEYYNKGDYQRAMNLLDGVRSVFVGQAKAQNIAYYRAFCSYNMKDYQIASDLFKQ 91 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I YPES + Y++G + DQ+ T+ ++ + RY S Sbjct: 92 FIQTYPESSFAEECLYMMGFCDYKASPKPRLDQQVTEKAIREFQLYLSRYPYSMRKDKVN 151 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 Y+ R++L+ K + Y R Y AA+ Q L +Y +++ EE M L + Sbjct: 152 TYMDEMRDKLSYKAYLSAKNYYLREHYKAAVISLQNCLKDYPGSKYREEIMYMLFVSKYQ 211 Query: 240 LALM----------DEAREVVSLIQERYPQGYWARYVETL 269 +A+ + ARE + YP +A V+ + Sbjct: 212 MAVNSVEDKKVERYNNAREEYYYFADEYPNSRYAADVKKM 251 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 18/146 (12%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFA---------------GVARKSLLMSAFVQYSAGKYQ 111 L +Q KA F +P++ ++ K+ L SA Y Y+ Sbjct: 121 RLDQQVTEKAIREFQLYLSRYPYSMRKDKVNTYMDEMRDKLSYKAYL-SAKNYYLREHYK 179 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK--LMLQYMSRIVERY 169 A + + YP SK + + Y++ +S QM + D++ + + + Y Sbjct: 180 AAVISLQNCLKDYPGSKYREEIMYMLFVSKYQMAVNSVEDKKVERYNNAREEYYYFADEY 239 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVE 195 NS Y + L + E Sbjct: 240 PNSRYAADVKKMYEDIEAYLENYKFE 265 >gi|326799177|ref|YP_004316996.1| outer membrane assembly lipoprotein YfiO [Sphingobacterium sp. 21] gi|326549941|gb|ADZ78326.1| outer membrane assembly lipoprotein YfiO [Sphingobacterium sp. 21] Length = 298 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 101/256 (39%), Gaps = 13/256 (5%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + ++ A+ F +G S+ L + D + Y +A+ + +SKA F S Sbjct: 1 MIWASALLFSIGMIGCKSKFEKLRTGNDNVAK---YREAINLYNNKKYSKALILFEDLSN 57 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 + + + A+ Y Y A + + QYP+S+ + ++ Y Sbjct: 58 KYRGRPENEELMYYFAYTNYRLRDYTSARFHFKNFTDQYPQSQRAEECRFMGAYCYYLES 117 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 DQ T ++ + + Y S + A ++ R++L K + YL G+ Sbjct: 118 PVYTLDQENTLKAIESLQLFINLYPKSDRAEEAAKFIQDLRDKLEHKSYANAKLYLDVGD 177 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEAREVVSLIQE 255 Y AA+ FQ L +Y D ++AEE +EA A EA E + + Sbjct: 178 YKAAVIAFQNSLRDYPDTKYAEEMEYLAIEAQYLYAKNSQLPSQEARYQEAVEFSNRFID 237 Query: 256 RYPQGYWARYVETLVK 271 YP+ + + E+L K Sbjct: 238 NYPESKYKKDAESLKK 253 >gi|295135083|ref|YP_003585759.1| nuclear transition protein [Zunongwangia profunda SM-A87] gi|294983098|gb|ADF53563.1| nuclear transition protein [Zunongwangia profunda SM-A87] Length = 281 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 86/245 (35%), Gaps = 16/245 (6%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 L ++ + +Y +A ++ + KA F Q + Sbjct: 18 VLQSCGDYQKVLKSDNAGDKYTFAENLYNEAKAEDSKRKYRKAIRLFEQILPQYRGKPQG 77 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 K + A Y G Y ++ E ++ YP S V+ + SY + DQ Sbjct: 78 EKLSYLFADSYYQVGDYYLSSFEFERFVQSYPNSDKVEEASFKSAKSYYEESPRFDLDQT 137 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR------GEYV 207 T ++ + + RY Y + A T R +L K EI + Y + G + Sbjct: 138 DTNKAIEALQSYLNRYPEGEYAEEANLMATELRLKLEKKAFEIAKQYWRIGGNYREGNFT 197 Query: 208 AAIPRFQLVLANYSDAEHAEEAMA--------RLVEAYVAL--ALMDEAREVVSLIQERY 257 AAI F +A+Y + EEA + +Y L + A E ++ Y Sbjct: 198 AAITSFNNFIADYPGTPYREEAFYLRFDAAYSYAINSYRNLMQERLQAALEYYQAYKKSY 257 Query: 258 PQGYW 262 P+G + Sbjct: 258 PEGEY 262 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 48/158 (30%), Gaps = 23/158 (14%) Query: 55 RYQREVYEKA-VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS------------- 100 + + YE++ L + + +KA E +P A ++ LM+ Sbjct: 120 KSAKSYYEESPRFDLDQTDTNKAIEALQSYLNRYPEGEYAEEANLMATELRLKLEKKAFE 179 Query: 101 -------AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV--GMSYAQMIRDVPYD 151 Y G + A + +I YP + + +YL + Sbjct: 180 IAKQYWRIGGNYREGNFTAAITSFNNFIADYPGTPYREEAFYLRFDAAYSYAINSYRNLM 239 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 Q + L+Y + Y Y+ + +L Sbjct: 240 QERLQAALEYYQAYKKSYPEGEYMANVDESYQDIQARL 277 >gi|149917378|ref|ZP_01905876.1| putative competence lipoprotein ComL [Plesiocystis pacifica SIR-1] gi|149821715|gb|EDM81111.1| putative competence lipoprotein ComL [Plesiocystis pacifica SIR-1] Length = 394 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 90/238 (37%), Gaps = 10/238 (4%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 A+ V + S + RE YE A Q++ A Y FP++ Sbjct: 2 ALSLAVAGGASACATGPNLSSDYSQTARENYELAQASFDNQDWEDAAAYARFVRERFPYS 61 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV--DYVYYLVGMSYAQMIRD- 147 R++ L+ A V Y +Y A ++ ++P ++V +V Y+V +S Sbjct: 62 RYVREAKLLEARVLYELKEYPSAQDAFRMFMAEHPTHEHVVNGWVPYMVAVSAYMASPSS 121 Query: 148 -------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 DQ + L + +RY+ + AR +L E+ + R++ Sbjct: 122 VPFLPPHFQRDQELLRQTLMELEVFFDRYSGTRMEPLARKLEAEVNRRLLEHELYVARFH 181 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 L R AAI R Y+ E + L Y+ + ++ R+ + +Q ++P Sbjct: 182 LDRDRPEAAIMRLSSAHDRYAGIGLDAEVLFLLGITYLRVGEVELGRQTFTELQMQHP 239 >gi|150025880|ref|YP_001296706.1| lipoprotein [Flavobacterium psychrophilum JIP02/86] gi|149772421|emb|CAL43903.1| Probable lipoprotein [Flavobacterium psychrophilum JIP02/86] Length = 264 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 94/260 (36%), Gaps = 19/260 (7%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K L F IA+ D ++YEK ++KA F Sbjct: 2 KKILYTFLIIAL--FSSCSEYQKAIKSEDVAVKTAAATKMYEK-------GKYAKAIRLF 52 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 Q S A M + Y G+Y + E + YP+SKN + +L S Sbjct: 53 EQISPVLKGKPEAENVFYMFSQSYYKTGQYYLSGYQFESFAALYPKSKNTEEAAFLGAKS 112 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 Y+++ DQ T + + + +Y NS Y+ A V R +L K EI + Y Sbjct: 113 YSELSPTYSLDQTDTDKAINKLQNFINKYPNSKYLADANVVVKDLREKLEKKAFEIAKQY 172 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEAREVV 250 ++ AI +A+Y + E+A+ + A LA+ + A+E Sbjct: 173 NTISDFKPAIKALDNFIADYPGTPYKEKALFYKLNASYQLAINSVPSKMQARLNVAKEAQ 232 Query: 251 SLIQERYPQGYWARYVETLV 270 + P + + + ++ Sbjct: 233 EALLNFNPNTEFKKTADEML 252 Score = 35.9 bits (82), Expect = 6.8, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 8/80 (10%) Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA--------LMDEAREVVS 251 Y K G+Y + +F+ A Y +++ EEA ++Y L+ D+A + Sbjct: 76 YYKTGQYYLSGYQFESFAALYPKSKNTEEAAFLGAKSYSELSPTYSLDQTDTDKAINKLQ 135 Query: 252 LIQERYPQGYWARYVETLVK 271 +YP + +VK Sbjct: 136 NFINKYPNSKYLADANVVVK 155 >gi|227536026|ref|ZP_03966075.1| conserved hypothetical lipoprotein [Sphingobacterium spiritivorum ATCC 33300] gi|227244139|gb|EEI94154.1| conserved hypothetical lipoprotein [Sphingobacterium spiritivorum ATCC 33300] Length = 304 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 99/265 (37%), Gaps = 19/265 (7%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + + + + F+ G + + + +++ Y++AV F +++ ++KA Sbjct: 5 RRLVAVVAGLLLIVFISGCKSKFEKLRASNNLALK------YQEAVKFYEKKKYTKALAL 58 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F+ + + A +A+ Y Y A +++ +P S + ++ Sbjct: 59 FDDLMQRYRGQAEAEDLYYYTAYTNYRLKDYTSARYHFKQFAQTFPNSAKAEECRFMTAY 118 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + DQ T+ + + V Y S K A + R++L K + Sbjct: 119 CFYLDSPRSSLDQENTRKAIDELQLFVNLYPESEKAKEASDLIQQLRDKLEKKAFSNAKL 178 Query: 200 YLKRG---EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD----EAREVVSL 252 Y G +Y AA+ + VL +Y D ++AEE +++A A + + Sbjct: 179 YYDMGLNDDYKAAVIALENVLKDYPDTKYAEEINYLIIKAQFRYAEKSTPRRQEERYSKV 238 Query: 253 IQE------RYPQGYWARYVETLVK 271 I YP+ + V+ + K Sbjct: 239 IDYYQDFVDDYPESKHRKEVDDIRK 263 >gi|300771724|ref|ZP_07081599.1| conserved hypothetical lipoprotein [Sphingobacterium spiritivorum ATCC 33861] gi|300761713|gb|EFK58534.1| conserved hypothetical lipoprotein [Sphingobacterium spiritivorum ATCC 33861] Length = 304 Score = 122 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 98/265 (36%), Gaps = 19/265 (7%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + + + + F+ G + + + +++ Y++AV F +++ ++KA Sbjct: 5 RRLVAVVAGLLLIVFISGCKSKFEKLRASNNLALK------YQEAVKFYEKKKYTKALAL 58 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F+ + + A +A+ Y Y A +++ +P S + ++ Sbjct: 59 FDDLMQRYRGQAEAEDLYYYTAYTNYRLKDYTSARYHFKQFAQTFPNSAKAEECRFMTAY 118 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + DQ T+ + + V Y S K A + R++L K + Sbjct: 119 CFYLDSPRSSLDQENTRKAIDELQLFVNLYPESEKAKEAADLIQQLRDKLEKKAFSNAKL 178 Query: 200 YLKRG---EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD----EAREVVSL 252 Y G +Y AA+ + VL Y D ++AEE +++A A + + Sbjct: 179 YYDMGLNDDYKAAVIALENVLKEYPDTKYAEEINYLIIKAQFRYAEKSTPRRQEERYSKV 238 Query: 253 IQE------RYPQGYWARYVETLVK 271 I YP+ + V+ + K Sbjct: 239 IDYYQDFVDDYPESKHRKEVDDIRK 263 >gi|319955738|ref|YP_004167005.1| outer membrane assembly lipoprotein yfio [Cellulophaga algicola DSM 14237] gi|319424398|gb|ADV51507.1| outer membrane assembly lipoprotein YfiO [Cellulophaga algicola DSM 14237] Length = 274 Score = 122 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 90/227 (39%), Gaps = 16/227 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A F + +++ +A Q + + + + A Y Y A E + Sbjct: 37 YDMAEKFYEAKDYKRANRLLEQITPKYIGKPQGERVMFFLADSYYQIKDYNTAGYQFERF 96 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + YP+S +LV SY + D DQ T LQ + + + S ++ A Sbjct: 97 LKSYPKSDKAQESGFLVAKSYYMLSPDYSLDQTDTDKALQKLQTFINTFPESEFMPEANQ 156 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEY------VAAIPRFQLVLANYSDAEHAEEAMARLV 234 + K +EIG+ + K GEY ++A + ++ + + E+A+ + Sbjct: 157 MAKDLTQKKELKAIEIGKQFTKLGEYYTLDFSISAAAAMDNFILDFPGSIYKEDALFYKM 216 Query: 235 EAYVALALM----------DEAREVVSLIQERYPQGYWARYVETLVK 271 +A LAL EA+ + +++ +P+ + + +++ Sbjct: 217 KALSNLALNSTEQKKKERLQEAKTAYNTLKKNFPETQFEKDANNMME 263 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 17/148 (11%), Positives = 44/148 (29%), Gaps = 22/148 (14%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGV-----------ARKSLLMSAFV---------QYS 106 L + + KA + FP + +K L + + Y+ Sbjct: 125 SLDQTDTDKALQKLQTFINTFPESEFMPEANQMAKDLTQKKELKAIEIGKQFTKLGEYYT 184 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYY--LVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 AA+ + +I +P S + + + +S + + + + Sbjct: 185 LDFSISAAAAMDNFILDFPGSIYKEDALFYKMKALSNLALNSTEQKKKERLQEAKTAYNT 244 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAK 192 + + + + + K A + +L Sbjct: 245 LKKNFPETQFEKDANNMMEKVEKELQNY 272 >gi|86144192|ref|ZP_01062528.1| lipoprotein protein, putative [Leeuwenhoekiella blandensis MED217] gi|85829322|gb|EAQ47788.1| lipoprotein protein, putative [Leeuwenhoekiella blandensis MED217] Length = 268 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 90/255 (35%), Gaps = 17/255 (6%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 T+ + V L D + +Y + K+ + + Q Sbjct: 9 TLVILLTVISLASCSEYQEALKSEDMGLKYSFADSLY-------DAGKYRKSVKLWEQIV 61 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + A + + + A Y Y A + +++ YP+S + Y +SYA++ Sbjct: 62 PAYRGKPQAERIMYLYADSHYQVEDYYLAGYQFDRFVSAYPDSDKAEEAQYKAAVSYAEL 121 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + DQ T+ L Y+ + + Y S Y A + +L K + + + K Sbjct: 122 SPNYQLDQSETEKGLDYLQQFITAYPESEYAADASERIKELSIKLQKKSYMVAKGWHKIM 181 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEAREVVSLIQ 254 +Y AI F L++Y + E A +++ +EA E+ + Sbjct: 182 DYPVAISAFDDFLSDYPGSPFREAAFFYKLDSQYQYGSKSIYVLVKPRLEEAIEMYETLI 241 Query: 255 ERYPQGYWARYVETL 269 +P+G + + + Sbjct: 242 RYFPEGEYRAQADEI 256 >gi|332882672|ref|ZP_08450284.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679472|gb|EGJ52457.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 287 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 50/221 (22%), Positives = 85/221 (38%), Gaps = 10/221 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A K + + KA + F Q + ++ + + Y +Y A E Sbjct: 54 YAEAEKQYKAKKYRKAVKLFEQIASEYSGKPQGERLYFLQGDAYYQMKQYSLATYPFERL 113 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP S +L S + DQ T L+ + ++RY++S Y K A Sbjct: 114 QKIYPRSAKAVEAAFLEAKSLYMQVPTYSVDQTYTYQALEKLQYFMDRYSDSDYAKEANE 173 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYV- 238 + QL KE EI + Y +Y AA+ LAN + E+A+ RL AY Sbjct: 174 LILNLLTQLQKKEFEIAKQYDLIRDYQAAMKSLDNFLANNPGSVFREDALYTRLHSAYEW 233 Query: 239 --------ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 +D A+E + +P+ + + + ++K Sbjct: 234 AINSVESKQKERLDTAKEAYDTLLRAFPETKYKKEADNMLK 274 Score = 39.3 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 36/131 (27%), Gaps = 16/131 (12%) Query: 75 KAYEYFNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEY 120 +A E + + A+++ A YQ A + + Sbjct: 150 QALEKLQYFMDRYSDSDYAKEANELILNLLTQLQKKEFEIAKQYDLIRDYQAAMKSLDNF 209 Query: 121 ITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRA-TKLMLQYMSRIVERYTNSPYVKGA 178 + P S + Y S + I V Q+ + ++ + + Y K A Sbjct: 210 LANNPGSVFREDALYTRLHSAYEWAINSVESKQKERLDTAKEAYDTLLRAFPETKYKKEA 269 Query: 179 RFYVTVGRNQL 189 + L Sbjct: 270 DNMLKKINTSL 280 >gi|299135640|ref|ZP_07028824.1| outer membrane assembly lipoprotein YfiO [Acidobacterium sp. MP5ACTX8] gi|298601764|gb|EFI57918.1| outer membrane assembly lipoprotein YfiO [Acidobacterium sp. MP5ACTX8] Length = 611 Score = 119 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 81/205 (39%), Gaps = 5/205 (2%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 ++ S+ S +++Y+KA+ K ++ A +P + ++ L Sbjct: 98 KRDSKLQPQLSKDAQLPDKQLYDKALAQSKSGHYDVARLDLQTLLNTYPDSQYQMRAKLA 157 Query: 100 SAFVQYSAG---KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 A Y G QA ++IT +P VG Y + + D Sbjct: 158 VADSFYREGGSAALAQAEQEYTDFITFFPNVPEAAEAQMRVGDIYLKQMDVPDRDYTKAL 217 Query: 157 LMLQYMSRIVERYTNSP--YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 + ++ +Y ++P ++ R + + +A +E E+G +Y + A I R+Q Sbjct: 218 KAEEAYRTMLRQYRDAPPKLLEEVRQKLREVQEVMATREAELGAFYASHENWAATIARYQ 277 Query: 215 LVLANYSDAEHAEEAMARLVEAYVA 239 V+ Y H ++A+ L +AY A Sbjct: 278 TVIDQYPQYSHMDDALIGLGDAYAA 302 >gi|225013058|ref|ZP_03703473.1| DNA uptake lipoprotein-like protein [Flavobacteria bacterium MS024-2A] gi|225002786|gb|EEG40767.1| DNA uptake lipoprotein-like protein [Flavobacteria bacterium MS024-2A] Length = 275 Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 90/229 (39%), Gaps = 10/229 (4%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + E Y++A ++ + KA F Q + A++ + A + Y Sbjct: 29 NSDDASEKYKQAEVYYNSGEYRKANRLFEQIIPKYRGKAQAQRIIFFFADSYFQTKSYYL 88 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 AA E +I YP+S + + SY DQ T ++ + + Y NS Sbjct: 89 AAYQYENFIKSYPQSDRIQEATFKAAKSYYFSSPKFSLDQEDTYTAIEKLQVFINLYPNS 148 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 ++ A ++ + +L K+ EI + Y +Y +AI + +A++ ++ E A+ Sbjct: 149 EFIVEANQMISELQEKLEQKDFEIAKQYYTIRDYQSAIKSSENFIASFPGTKYRESALFN 208 Query: 233 LVEAYV----------ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 +A L + E ++ +I YP+ + +E +K Sbjct: 209 KFKASYEIAVNSVFSKKLDRLQELQQQYEVILRYYPETLFLSELEDKMK 257 >gi|86131754|ref|ZP_01050351.1| conserved hypothetical protein [Dokdonia donghaensis MED134] gi|85817576|gb|EAQ38750.1| conserved hypothetical protein [Dokdonia donghaensis MED134] Length = 270 Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 95/254 (37%), Gaps = 21/254 (8%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 F +AV L D + +Y + + KA + + Q Sbjct: 6 FLLVAVVLLSSCSAYQDVLKNDDIKAKYTFADSLYSQ-------GKYKKALKLWEQIVPL 58 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 + A + + A Y G Y Q E ++ +P+S+ + Y SY Sbjct: 59 YRGRPQAERVSYLYANTFYELGDYYQGGYQFERFVKSFPQSEKREEAAYKSAESYYNRSP 118 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK---- 202 DQ T + + + + +Y +S + A V ++ K EI + Y K Sbjct: 119 RFNLDQGDTYIAMGKLQDFINQYPDSERLDDANAKVQELNQKIERKAYEIAKGYNKIGES 178 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----------MDEAREVVSL 252 RG + AI F L ++ +++ E+A+ + LAL +++A+E + Sbjct: 179 RGTFPNAIKAFDNFLLDFPGSKYREDALYWKFNSTYQLALGSVRRRKAERLEDAKEAYNA 238 Query: 253 IQERYPQGYWARYV 266 +++ +P+G ++ Sbjct: 239 LEKYFPEGKYSEQA 252 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 18/156 (11%), Positives = 43/156 (27%), Gaps = 21/156 (13%) Query: 55 RYQREVYEKA-VLFLKEQNFSKAYEYFNQCSRDFPFAG--------------VARKSLLM 99 + Y ++ L + + A +P + + Sbjct: 108 KSAESYYNRSPRFNLDQGDTYIAMGKLQDFINQYPDSERLDDANAKVQELNQKIERKAYE 167 Query: 100 SAFVQYSAGK----YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 A G+ + A + ++ +P SK + Y S Q+ ++A Sbjct: 168 IAKGYNKIGESRGTFPNAIKAFDNFLLDFPGSKYREDALYWKFNSTYQLALGSVRRRKAE 227 Query: 156 K--LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + + + + + + Y + A V L Sbjct: 228 RLEDAKEAYNALEKYFPEGKYSEQAAEEVAAVNEAL 263 >gi|195953522|ref|YP_002121812.1| putative lipoprotein [Hydrogenobaculum sp. Y04AAS1] gi|195933134|gb|ACG57834.1| putative lipoprotein [Hydrogenobaculum sp. Y04AAS1] Length = 308 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 82/229 (35%), Gaps = 7/229 (3%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 F L++ A + + + ++ ++ E + E+N +A +Y Sbjct: 8 FTLSMVILGASLMVSSCAKVTQKEREQRAINGYIKGSEAFTNGDYSSAEENLKRALKYLE 67 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 ++ M A Y Y A E ++ YP S Y++ SY Sbjct: 68 NL-----TPEQIERARFMLAKSYYLDHDYTNAIIYLESFLYYYPNSPEAPQATYMLIKSY 122 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 ++ D DQ T + + +Y N+PY R + R ++A + I ++Y Sbjct: 123 YKIAPDAYRDQTYTYKAIDLAKEFLSKYPNNPYDSDVRALIDKARQKIAKHDELIAKFYE 182 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 G Y A R++ +L N D ++ + L + +A+ Sbjct: 183 DYGFYYPAAERYKDMLIN--DTQYISKTKTYYRLIKNLLLVPKQAKRYE 229 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 33/85 (38%), Gaps = 8/85 (9%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA--------LMDE 245 + + Y +Y AI + L Y ++ A +A L+++Y +A + Sbjct: 79 FMLAKSYYLDHDYTNAIIYLESFLYYYPNSPEAPQATYMLIKSYYKIAPDAYRDQTYTYK 138 Query: 246 AREVVSLIQERYPQGYWARYVETLV 270 A ++ +YP + V L+ Sbjct: 139 AIDLAKEFLSKYPNNPYDSDVRALI 163 >gi|260911827|ref|ZP_05918394.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] gi|260634038|gb|EEX52161.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] Length = 274 Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 94/267 (35%), Gaps = 27/267 (10%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + S AV L ++ ++ D+V YE A + + +A + Sbjct: 5 LLIISTAVLLLSSCAQEFNQVYKSDNVQYK------YEYAKECFAKGKYVRAITLLQELV 58 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A++SL M A +Y++ Y+ AA ++Y YP+ + + + VG S Sbjct: 59 TLQKGTENAQESLYMLAMAEYNSKDYETAAQYFKKYFQSYPKGRYAEIAQFYVGQSLFMS 118 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + DQ T + ++ Y +S A+ + +++L KE+ + Y G Sbjct: 119 TPEPRLDQSRTIQAITDFQTFLDLYPDSKLKPQAQQRLFDLQDKLVEKELHTAQLYYDLG 178 Query: 205 -----------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM---------- 243 Y A I Q L +Y + E+ L+++ LA Sbjct: 179 TYFGNCNYGGNNYEACIITSQNALKDYPYSRLREDFAVLLMKSKFELAQQSVETKKLERF 238 Query: 244 DEAREVVSLIQERYPQGYWARYVETLV 270 +A + YP E L+ Sbjct: 239 QDAEDECYGFINEYPDSKERTLAEKLI 265 >gi|288927578|ref|ZP_06421425.1| lipoprotein [Prevotella sp. oral taxon 317 str. F0108] gi|288330412|gb|EFC68996.1| lipoprotein [Prevotella sp. oral taxon 317 str. F0108] Length = 270 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 89/257 (34%), Gaps = 27/257 (10%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + S A L + ++ D++ YE A + + +A + Sbjct: 2 LIISTAALLLSSCAHEFNQVYKSDNMQYK------YEYAKECFAKGKYVRAITLLQELVT 55 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 A++SL M A QY++ Y+ AA ++Y YP+ + + + VG S Sbjct: 56 LQKGTENAQESLYMLAMAQYNSKDYETAAQYFKKYYQSYPKGRYAEMAQFYVGQSLFMST 115 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG- 204 + DQ T + ++ Y +S A+ + +++L KE+ + Y G Sbjct: 116 PEPRLDQSRTIQAITDFQTFLDLYPDSKLKPQAQQRLFDLQDKLVEKELYTAKLYYDLGT 175 Query: 205 ----------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------D 244 Y A I Q L +Y + E+ L+++ LA Sbjct: 176 YFGNCNFGGNNYEACIITSQNALKDYPYSRLREDFAVLLMKSKFELAQQSVETKKLERFQ 235 Query: 245 EAREVVSLIQERYPQGY 261 +A + YP Sbjct: 236 DAEDECYGFINEYPDSK 252 >gi|88803410|ref|ZP_01118936.1| hypothetical protein PI23P_12497 [Polaribacter irgensii 23-P] gi|88780976|gb|EAR12155.1| hypothetical protein PI23P_12497 [Polaribacter irgensii 23-P] Length = 270 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 48/236 (20%), Positives = 85/236 (36%), Gaps = 15/236 (6%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 V + E Y+ AV + QN+ KA F + + + + M A ++ Sbjct: 9 KVLNKGATEEQYKMAVKMYETQNYDKAIRLFEKVTPSYRGKPQMERIEFMVAQSNFNEKN 68 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y A + + +S + +L SY D T L + Y Sbjct: 69 YSIAGFYFNRFTNNFTKSSKKEEAAFLAAYSYKLASPRFSIDPTETNKALDAFQSFINTY 128 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-----GEYVAAIPRFQLVLANYSDAE 224 NS + A Y R++L K EI + Y K Y AAI F +L ++ + Sbjct: 129 PNSDKIIEANKYYAEIRSKLEKKYFEIAKTYYKTADYDLRNYKAAIQAFDNLLEDFLGTK 188 Query: 225 HAEEAMARLVEAY----------VALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + EEA+ ++A L ++ A E +Q+ +P+ + ++ Sbjct: 189 YKEEALYFQLKAAHDFVLKSTDRRKLERIESAVEAHERLQKSFPESIYTEDANAML 244 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 38/134 (28%), Gaps = 21/134 (15%) Query: 74 SKAYEYFNQCSRDFPFAG--------VAR-KSLLM-----SAFVQYSAGKYQ-----QAA 114 +KA + F +P + A +S L A Y Y A Sbjct: 115 NKALDAFQSFINTYPNSDKIIEANKYYAEIRSKLEKKYFEIAKTYYKTADYDLRNYKAAI 174 Query: 115 SLGEEYITQYPESKNVDYVYY--LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + + + +K + Y L + + ++ R+ + + S Sbjct: 175 QAFDNLLEDFLGTKYKEEALYFQLKAAHDFVLKSTDRRKLERIESAVEAHERLQKSFPES 234 Query: 173 PYVKGARFYVTVGR 186 Y + A + + Sbjct: 235 IYTEDANAMLATLQ 248 >gi|254495492|ref|ZP_05108416.1| conserved hypothetical protein [Polaribacter sp. MED152] gi|85819847|gb|EAQ41004.1| conserved hypothetical protein [Polaribacter sp. MED152] Length = 289 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 87/236 (36%), Gaps = 15/236 (6%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 V + E Y+ AV + + FSKA F + + + + M A ++ Sbjct: 25 KVLNKGSVEEKYKMAVKMYETKKFSKALRLFEKVTPAYRGKPQMERIQFMVAQSNFNVKN 84 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y A + + YP S + +L SY D T+ L+ + Y Sbjct: 85 YTTAGYYFDRFTKNYPSSSKNEEAAFLSAYSYKLASPVSSKDPTDTRKALESFQMFINNY 144 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYY-----LKRGEYVAAIPRFQLVLANYSDAE 224 +S ++ A + R +L K +I + Y Y AAI F +LA+Y +E Sbjct: 145 PDSDKIEEANQHYKELRYKLQKKYFDIAKVYYTTADYDMRNYKAAIQAFDNLLADYLGSE 204 Query: 225 HAEEAM-ARLVEAYVALALMDEAREVVSL---------IQERYPQGYWARYVETLV 270 EEA+ RL A+ + E R+ + + YP+ + ++ Sbjct: 205 FKEEALFYRLKAAHDFVLKSTERRKPERIKDAIEAYDKLVRNYPESQYLEEANEML 260 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 55/190 (28%), Gaps = 66/190 (34%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--------KYQQAAS 115 A +N++ A YF++ ++++P + ++ +SA+ A ++A Sbjct: 76 AQSNFNVKNYTTAGYYFDRFTKNYPSSSKNEEAAFLSAYSYKLASPVSSKDPTDTRKALE 135 Query: 116 LGEEYITQYPESK---------------------NVDYVYY------------------- 135 + +I YP+S ++ VYY Sbjct: 136 SFQMFINNYPDSDKIEEANQHYKELRYKLQKKYFDIAKVYYTTADYDMRNYKAAIQAFDN 195 Query: 136 ------------------LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 L + K ++ ++V Y S Y++ Sbjct: 196 LLADYLGSEFKEEALFYRLKAAHDFVLKSTERRKPERIKDAIEAYDKLVRNYPESQYLEE 255 Query: 178 ARFYVTVGRN 187 A +T + Sbjct: 256 ANEMLTTLQK 265 >gi|213585273|ref|ZP_03367099.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 99 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 41/91 (45%) Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + D + + S++V Y NS Y A + +++LA E + YY RG Sbjct: 9 VDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARG 68 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 +VA + R + +L NY D + +A+ + Sbjct: 69 AWVAVVNRVEGMLRNYPDTQATRDALPLMEN 99 >gi|89891617|ref|ZP_01203121.1| conserved hypothetical lipoprotein [Flavobacteria bacterium BBFL7] gi|89516164|gb|EAS18827.1| conserved hypothetical lipoprotein [Flavobacteria bacterium BBFL7] Length = 264 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 84/216 (38%), Gaps = 10/216 (4%) Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 L + + KA F+Q + A + A Y Y +A E ++ +P Sbjct: 38 TLLNREKYGKAVNLFDQIIPQYRGTDKAEALSIKYAKALYETKDYPNSAYQYERFVQSHP 97 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 S++ ++ Y+ S+ M Q T L + + Y + YV+ A V+ Sbjct: 98 ASEDREFAAYMGAKSHYHMSAVYSKSQVNTDRALAKLQDYINLYPDGEYVEEANDLVSEL 157 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM-- 243 R +L K EI + Y R Y+ AI F+ + + ++ ++A L+++ A+ Sbjct: 158 RYKLDRKAYEIAKNYHHRSRYIPAIKSFENFIIQHPGSDFMDDAQFYLIDSQYLYAIKSR 217 Query: 244 --------DEAREVVSLIQERYPQGYWARYVETLVK 271 + A + + R+P + + +++ Sbjct: 218 EELVPERLEAATKYYNTFVSRFPASEYREDADEIME 253 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 16/132 (12%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLG 117 N +A +P ++ A + +Y A Sbjct: 126 NTDRALAKLQDYINLYPDGEYVEEANDLVSELRYKLDRKAYEIAKNYHHRSRYIPAIKSF 185 Query: 118 EEYITQYPESKNVDYVY-YLVGMSYAQMIRDVP-YDQRATKLMLQYMSRIVERYTNSPYV 175 E +I Q+P S +D YL+ Y I+ + +Y + V R+ S Y Sbjct: 186 ENFIIQHPGSDFMDDAQFYLIDSQYLYAIKSREELVPERLEAATKYYNTFVSRFPASEYR 245 Query: 176 KGARFYVTVGRN 187 + A + + Sbjct: 246 EDADEIMENIND 257 >gi|282878378|ref|ZP_06287170.1| outer membrane assembly lipoprotein YfiO [Prevotella buccalis ATCC 35310] gi|281299564|gb|EFA91941.1| outer membrane assembly lipoprotein YfiO [Prevotella buccalis ATCC 35310] Length = 282 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 96/267 (35%), Gaps = 24/267 (8%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 +FF +C + + +S + TD Y+ YE A + +++A N Sbjct: 6 LFFISTICVALLFGSCASEFNAVYKSTDTNYR---YEYAKECFFKGKYTRAITLLNDLIV 62 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 A++SL M A QY +G Y+ AA + Y+ YP+ K + Y VG S Sbjct: 63 VQKGTENAQESLYMLAMAQYKSGDYESAAQAFKRYVQSYPKGKYAELASYYVGESLFMCT 122 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG- 204 + DQ T + ++ + ++ A+ + +++L KE+ + Y G Sbjct: 123 PEPRLDQSQTVSAIASFQEFLDLFPDAKLKNSAQNRLFELQDKLVKKELYSAQLYYDLGP 182 Query: 205 ----------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----------MD 244 Y A I + L +Y + E ++++ LA Sbjct: 183 YFGNCTSGGNNYEACIITAENALKDYPYSSLRENFAVLVMKSKFELAEQSVEEKRLERYQ 242 Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271 +A + YP E +K Sbjct: 243 DAEDECYGFINEYPDSKQRPLAEKFIK 269 >gi|332519650|ref|ZP_08396114.1| outer membrane assembly lipoprotein YfiO [Lacinutrix algicola 5H-3-7-4] gi|332044209|gb|EGI80403.1| outer membrane assembly lipoprotein YfiO [Lacinutrix algicola 5H-3-7-4] Length = 267 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 71/181 (39%), Gaps = 1/181 (0%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y V +E +SKA F + A K + ++A Y Y + E + Sbjct: 33 YRMGVKKYEEGKYSKANRIFEMIIPQYRGKPQAEKLMFLNADALYQMEDYYVSGYHFERF 92 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-YVKGAR 179 I+ YP+S+ + + SY ++ DQ T LQ + + Y S V A Sbjct: 93 ISSYPKSEKLAEASFKSAKSYYELSPVYSKDQTETITALQKLQEFINLYPESEAEVAQAN 152 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 V +L K EI + Y K +Y A+I F ++++ EEA+ ++ Sbjct: 153 EMVKELDYKLEKKAFEIAKQYNKISDYKASIASFDDFISDFPGTSLREEALYIRFDSAYK 212 Query: 240 L 240 L Sbjct: 213 L 213 >gi|120435007|ref|YP_860693.1| hypothetical protein GFO_0648 [Gramella forsetii KT0803] gi|117577157|emb|CAL65626.1| conserved hypothetical protein [Gramella forsetii KT0803] Length = 279 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 92/260 (35%), Gaps = 13/260 (5%) Query: 13 EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72 + + + K L + + +++ + T ++Y + + Sbjct: 5 QMFLRIMKKGILVLGLLMVTLSCSEYQKLLKNEETAPKYT---AAEQLYNEGKEEDSNKK 61 Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 KA + Q ++ + + + A Y G Y A + ++ YP+S+ + Sbjct: 62 LRKALKLLEQIEPEYRGKPQGERIVFILADTYYQLGDYFNAPFQFDRFLQLYPKSQKAEE 121 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 Y SY DQ T ++ + + Y + + A T +L K Sbjct: 122 AGYKSASSYFYRSPKYNLDQTDTHKAIEELQVYLNTYPEGEFNEEANKMATELLVKLEKK 181 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM--------- 243 + EI + Y Y AAI F +A++ + E A ++ LA+ Sbjct: 182 DYEIAKQYHHTEYYKAAIASFNNFIADHPGSPFREAAYFYRFDSAYRLAINSFEVLMEER 241 Query: 244 -DEAREVVSLIQERYPQGYW 262 +EARE ++ YP+G + Sbjct: 242 LNEAREFYKSYKKYYPEGEY 261 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 18/150 (12%), Positives = 38/150 (25%), Gaps = 26/150 (17%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS--------------LLMSAFVQYS 106 Y L + + KA E +P ++ A + Sbjct: 132 YRSPKYNLDQTDTHKAIEELQVYLNTYPEGEFNEEANKMATELLVKLEKKDYEIAKQYHH 191 Query: 107 AGKYQQAASLGEEYITQYPESK--NVDYVY-----YLVGMSYAQMIRDVPYDQRATKLML 159 Y+ A + +I +P S Y Y Y + ++ + + Sbjct: 192 TEYYKAAIASFNNFIADHPGSPFREAAYFYRFDSAYRLAINSFE-----VLMEERLNEAR 246 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 ++ + Y Y ++ L Sbjct: 247 EFYKSYKKYYPEGEYTPQLEDALSEIDKSL 276 >gi|218960399|ref|YP_001740174.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] gi|167729056|emb|CAO79967.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] Length = 244 Score = 111 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 98/239 (41%), Gaps = 12/239 (5%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC--SR 85 + + + SS L + ++ E++ K + +S+A + + R Sbjct: 5 IFLLLITVFCLVSCSSNKTQLSTEAKLKNADELFAK-------KKYSRAAVIYEEISFER 57 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 A + A ++ K+ A + +++I +P+ +NV Y+ +G+ + Sbjct: 58 KSAATAYAT---MKVADCYFNMNKFSDARAKYQQFINSFPDHENVADAYFRIGVCLFEES 114 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 YDQ T ++ ++RY N P A Y+ + +L K+ G Y K + Sbjct: 115 LPPQYDQTETIKCIEAFQTFIDRYPNDPRYVQAVDYIHKCQYKLLEKQYLTGYIYYKMKD 174 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 Y +A+ F +++ ++ E +++ + ++ D+A+ ++ RYP A+ Sbjct: 175 YSSALMYFDEIVSLGNNDELDRQSLYYSAKLHLHQKNYDKAKASYERLKNRYPDSKEAK 233 Score = 35.9 bits (82), Expect = 7.0, Method: Composition-based stats. Identities = 15/125 (12%), Positives = 30/125 (24%), Gaps = 22/125 (17%) Query: 75 KAYEYFNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEY 120 K E F +P ++ ++ ++ Y Y A +E Sbjct: 126 KCIEAFQTFIDRYPNDPRYVQAVDYIHKCQYKLLEKQYLTGYIYYKMKDYSSALMYFDEI 185 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 ++ + Y + Q+ R+ RY +S K Sbjct: 186 VSLGNNDELDRQSLYYSAKLHLH--------QKNYDKAKASYERLKNRYPDSKEAKSLTK 237 Query: 181 YVTVG 185 Sbjct: 238 KFAKL 242 >gi|91216488|ref|ZP_01253454.1| lipoprotein protein, putative [Psychroflexus torquis ATCC 700755] gi|91185282|gb|EAS71659.1| lipoprotein protein, putative [Psychroflexus torquis ATCC 700755] Length = 272 Score = 111 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 77/219 (35%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + + V + + +Y+K + K + ++KA F Q Sbjct: 4 IVLLLLVVISFSSCSEYQKVLKKDEIALKYEMAKSMYDKGLEKGKGKYYTKAIRLFEQIL 63 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + M+A Y G Y + L E + YP S + +Y +SY ++ Sbjct: 64 PQYKGKPSGETVSYMNANSHYLLGDYFLSGYLFERFSKSYPNSVKAEEAHYKSAVSYYEV 123 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 DQ T+ + + + Y + + + + + +++ K EI + Y Sbjct: 124 SPIYSKDQEDTQTAMTKLQFYINTYPDGEFFEESNSKIQELSSKIEKKYYEISKQYHHTE 183 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 Y +AI F + + + E+A E+ LA+ Sbjct: 184 RYKSAIESFDNYILKFPGTKFREQAFFYKFESAYILAIN 222 >gi|213961696|ref|ZP_03389962.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sputigena Capno] gi|213955485|gb|EEB66801.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sputigena Capno] Length = 268 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 82/220 (37%), Gaps = 10/220 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A K + + KA F Q + ++ + M Y +Y A+ E Sbjct: 35 YIEAEKLYKAKKYKKANRLFEQIASEYAGKPQGERIYYMYGDACYQLKQYSLASYQFERL 94 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP S+ +L S DQ T L+ + ++RY NS Y K A Sbjct: 95 QKLYPRSEKATEASFLEAKSLYLETPKYSVDQTYTYQALEKLQYFLDRYPNSEYTKEANE 154 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYV- 238 +L K+ EI + Y K +Y AA+ L N + EEA+ RL AY Sbjct: 155 LTLDLVTRLEKKDFEIAKQYDKIRDYQAAMKSLDNFLTNNPGSPFREEALYTRLHSAYEW 214 Query: 239 --------ALALMDEAREVVSLIQERYPQGYWARYVETLV 270 ++ A+E + YP+ + + E ++ Sbjct: 215 AINSVESKKEERLNTAKEAYDNLLRAYPESKFKKEAENML 254 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 36/131 (27%), Gaps = 16/131 (12%) Query: 75 KAYEYFNQCSRDFPFAGVARKS--------------LLMSAFVQYSAGKYQQAASLGEEY 120 +A E +P + +++ A YQ A + + Sbjct: 131 QALEKLQYFLDRYPNSEYTKEANELTLDLVTRLEKKDFEIAKQYDKIRDYQAAMKSLDNF 190 Query: 121 ITQYPESKNVDYVYYLVGMSYAQ-MIRDVP-YDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +T P S + Y S + I V + + ++ Y S + K A Sbjct: 191 LTNNPGSPFREEALYTRLHSAYEWAINSVESKKEERLNTAKEAYDNLLRAYPESKFKKEA 250 Query: 179 RFYVTVGRNQL 189 + L Sbjct: 251 ENMLAKINTSL 261 >gi|325103099|ref|YP_004272753.1| outer membrane assembly lipoprotein YfiO [Pedobacter saltans DSM 12145] gi|324971947|gb|ADY50931.1| outer membrane assembly lipoprotein YfiO [Pedobacter saltans DSM 12145] Length = 289 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 81/219 (36%), Gaps = 10/219 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y++A+ +++++KA F+ + + A A+ Y Y A + + Sbjct: 40 YQEAIKLYNKKDYTKALSLFDDLVQRYRGRSEAEDLYYYYAYTNYKLKDYISARYHFKTF 99 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP S + ++ DQ T ++ + Y S V A Sbjct: 100 ADTYPSSPKAEECRFMTAYCMYLESPVYSLDQDNTYKAIESFQLFINLYPQSDRVAEASK 159 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE-------EAMARL 233 + R++L K + +L G+Y AA+ F+ + ++ D ++AE EA Sbjct: 160 LIESLRDKLEQKSFANAKLFLDIGDYQAAVIAFRNSIKDFPDTKYAEQIDYLTIEAQYLY 219 Query: 234 VEAYVALALMDEAREVVSLIQ---ERYPQGYWARYVETL 269 + + + +E + ERYP +++ L Sbjct: 220 AKNSREIKQEERYQEAIDEYDRFMERYPNSKYSKDANKL 258 >gi|312891339|ref|ZP_07750857.1| outer membrane assembly lipoprotein YfiO [Mucilaginibacter paludis DSM 18603] gi|311296200|gb|EFQ73351.1| outer membrane assembly lipoprotein YfiO [Mucilaginibacter paludis DSM 18603] Length = 306 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 81/221 (36%), Gaps = 10/221 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + + + ++++++A + F + + A A+ Y Y A + + Sbjct: 40 YHEGIKYYNKKDYTRALDLFEDLVQRYRGTTEAEDLYYYYAYTNYKLKDYTSARYHFKTF 99 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP S + ++ Y + DQ T+ + M + Y S A Sbjct: 100 ADSYPNSSRTEECRFMSAYCYYLDSPNFSLDQENTQKAIDAMQLFINLYPKSDRAPEAGK 159 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-------AMARL 233 + R++L K + YL G+Y +A+ F L +Y D ++AEE A Sbjct: 160 LIQNLRDKLEEKSYANAKLYLTIGDYQSAVIAFGNSLRDYPDIKYAEEMEFLTIKAQYLY 219 Query: 234 VEAYVALALMDEAREVVS---LIQERYPQGYWARYVETLVK 271 + + + ++ E+YP + + E L K Sbjct: 220 AKNSYEIKQQERYESAIAFHDQFVEKYPNSKYLKDAELLKK 260 >gi|255534236|ref|YP_003094607.1| lipoprotein protein, putative [Flavobacteriaceae bacterium 3519-10] gi|255340432|gb|ACU06545.1| lipoprotein protein, putative [Flavobacteriaceae bacterium 3519-10] Length = 324 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 84/226 (37%), Gaps = 11/226 (4%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + Y L FF+++ C + D + + + A + + ++ A Sbjct: 2 KKYLIVLLAFFALSAC-----------NRQQDLAMKSADKDYILKVANENFENKKWTDAL 50 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + + S A + SA+ Y Y+ A + + +P+ + Y+ Sbjct: 51 ALYERLSNLVAGTDDAPNVVYNSAYANYYDKNYKLAGHQFKNFSVTFPQDPRAEDAAYMS 110 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + + D DQ +T+L + + + Y NS K + +L K E Sbjct: 111 ALCFYEGSMDYNLDQTSTELAINELQNFLNNYPNSEKSKNINELIDELTYKLEFKAYENA 170 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 R Y K +Y AA F+ VL ++ + + + ++ + LA+ Sbjct: 171 RQYFKMADYKAANVAFENVLYDFPSTKLSPKINEYILRSKYELAVN 216 >gi|325288190|ref|YP_004263980.1| outer membrane assembly lipoprotein YfiO [Cellulophaga lytica DSM 7489] gi|324323644|gb|ADY31109.1| outer membrane assembly lipoprotein YfiO [Cellulophaga lytica DSM 7489] Length = 270 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 47/225 (20%), Positives = 85/225 (37%), Gaps = 16/225 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A F E +F +A Q + + + + A Y G+Y A E + Sbjct: 33 YEMAEKFYDEGDFKRANRLLEQIASKYIGKPQGERVMFFFANSYYQIGQYNDAGYQFERF 92 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + YP S+ + +L SY+ + R DQ T L + + Y +S Y+ A Sbjct: 93 VKAYPRSEKMQEASFLGAKSYSYLSRKYSLDQTDTDKALLKIQNFINTYPDSEYLPEANE 152 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEY------VAAIPRFQLVLANYSDAEHAEEAMARLV 234 + K +EI + + K GE+ ++AI + + + + EEA+ Sbjct: 153 IAASLTRKKEKKALEIAKQFTKLGEFYDLEYSISAIKALENFMLDNPGTIYKEEALYYKT 212 Query: 235 EAYVALALM----------DEAREVVSLIQERYPQGYWARYVETL 269 A LA+ A E + + +P+ +A+ + Sbjct: 213 LAAYNLAINSHPNKKEERLKNANEAYGKLIKTFPETEFAKKANNM 257 >gi|189219588|ref|YP_001940229.1| TPR repeats containing protein [Methylacidiphilum infernorum V4] gi|189186446|gb|ACD83631.1| TPR repeats containing protein [Methylacidiphilum infernorum V4] Length = 350 Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 61/154 (39%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + F R P+ A + KY A + I +YP D Y Sbjct: 157 AAQIFESIIRAAPYGRFAPLAEFQLGLTYIKEKKYTDAIATFNRLIDKYPNHSLADDAQY 216 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 +G ++ Q + YDQ +T+ ++ + RY + V+ A+ ++ +++ Sbjct: 217 EIGYTWYQASQASEYDQSSTEKAIEGFEDYIVRYPSGDKVEAAKAHIAELKSKSTLGSFH 276 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 I ++Y + + AA + V+ ++ A+ A Sbjct: 277 IAQFYERAKNFKAAYIYYSDVIKQNPTSDQAKIA 310 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 63/198 (31%), Gaps = 30/198 (15%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 A F + +++ A + + R +P+A A ++ G + A + I Sbjct: 55 NLAKKFEEAKDYENALKAYRILIRKWPYAVFAPEAQFRIGQCLEKKGDFLGANKAYDRMI 114 Query: 122 TQYPESKNVDYV---------YYLVG--MSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +YP S + YL G + D + Q I+ Sbjct: 115 QKYPSSSFFEQALERKLAIGNLYLAGEPKRLFNIPMGSGLD-----IAAQIFESIIRAAP 169 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 + A E ++G Y+K +Y AI F ++ Y + A++A Sbjct: 170 YGRFAPLA--------------EFQLGLTYIKEKKYTDAIATFNRLIDKYPNHSLADDAQ 215 Query: 231 ARLVEAYVALALMDEARE 248 + + + E + Sbjct: 216 YEIGYTWYQASQASEYDQ 233 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 54/146 (36%), Gaps = 16/146 (10%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY---SAGKYQQ----- 112 ++ + ++KE+ ++ A FN+ +P +A + + Y A +Y Q Sbjct: 179 FQLGLTYIKEKKYTDAIATFNRLIDKYPNHSLADDAQYEIGYTWYQASQASEYDQSSTEK 238 Query: 113 AASLGEEYITQYPESKNVDYVYYLVG-------MSYAQMIRDVPYDQRATKLMLQYMSRI 165 A E+YI +YP V+ + + + + + K Y S + Sbjct: 239 AIEGFEDYIVRYPSGDKVEAAKAHIAELKSKSTLGSFHIAQFYER-AKNFKAAYIYYSDV 297 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAA 191 +++ S K A+ + +A Sbjct: 298 IKQNPTSDQAKIAQQKIVQLHPLVAK 323 >gi|163756996|ref|ZP_02164102.1| lipoprotein protein, putative [Kordia algicida OT-1] gi|161323000|gb|EDP94343.1| lipoprotein protein, putative [Kordia algicida OT-1] Length = 264 Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 91/262 (34%), Gaps = 20/262 (7%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + KF + +I +++ + YE A KE F K+ Sbjct: 1 MPKFLYLVLIAITFASCSEYQKALKSEDTKVK----------YELAERLYKEGKFKKSSR 50 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F Q + + + A + ++ + E ++ YP+S ++ + Sbjct: 51 LFEQIVPRYRGKPQGERVTFLYARSLFEIEQFIVSGYQFERFVRSYPKSDSIQSAAFYEA 110 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 SY DQR T + + + Y +S Y+ A V ++ K EI + Sbjct: 111 KSYYMESPRYSIDQRETIKAINKLQSFINNYPDSKYLDNANVMVDELTTKIEKKAYEIAK 170 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL----------ALMDEARE 248 Y +Y ++I + L++Y E+AM ++A L +EA Sbjct: 171 QYNTISDYKSSIKAVENFLSDYPGTSFREDAMFLKLDAMYNLATKSFASLMEGRYNEAAS 230 Query: 249 VVSLIQERYPQGYWARYVETLV 270 + + YP+ + + ++ Sbjct: 231 AYKTLVKFYPESKYREEADKIM 252 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 47/165 (28%), Gaps = 23/165 (13%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFS-------KAYEYFNQCSRDFPFAGVARKSLLM--- 99 +D YE +++ +S KA ++P + + +M Sbjct: 97 PKSDSIQSAAFYEAKSYYMESPRYSIDQRETIKAINKLQSFINNYPDSKYLDNANVMVDE 156 Query: 100 -----------SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV--GMSYAQMIR 146 A + Y+ + E +++ YP + + +L M Sbjct: 157 LTTKIEKKAYEIAKQYNTISDYKSSIKAVENFLSDYPGTSFREDAMFLKLDAMYNLATKS 216 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 + +V+ Y S Y + A + +LA Sbjct: 217 FASLMEGRYNEAASAYKTLVKFYPESKYREEADKIMASITEELAK 261 >gi|220933427|ref|YP_002512326.1| outer membrane assembly lipoprotein YfiO [Thioalkalivibrio sp. HL-EbGR7] gi|219994737|gb|ACL71339.1| outer membrane assembly lipoprotein YfiO [Thioalkalivibrio sp. HL-EbGR7] Length = 239 Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 92/239 (38%), Gaps = 14/239 (5%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 +A L G Q R D+ Y V + + + A + Sbjct: 1 MVLLASVLLAGCATQGVRPADDDTAA--------YRAVVEAVSASDCAAARQALQVMQAQ 52 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 P + + + +A+ S G+ +A L ++ Q+P + +Y YL + + Sbjct: 53 HPNSPRLPDARIETAYACLSGGELAEAEELVITFLEQHPGHPSEEYGRYLHALVAYARWK 112 Query: 147 DVPYDQRATKLMLQYMSR------IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 ++P D + ++ Q +V +Y + Y R +T R LA E+E Sbjct: 113 ELPPDTPSVRVAAQARQTFGRIRVLVSQYPETAYASDLRMMLTDLREGLARVELETIATD 172 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 L+ G + A I R VL +Y+ E A A+A L+ A+ A AR + ++ +P Sbjct: 173 LQAGRHQAVISRANYVLNHYAATESAPFALAALINAHRARGEEAAARTHLYRLESDWPD 231 >gi|282879577|ref|ZP_06288308.1| outer membrane assembly lipoprotein YfiO [Prevotella timonensis CRIS 5C-B1] gi|281306525|gb|EFA98554.1| outer membrane assembly lipoprotein YfiO [Prevotella timonensis CRIS 5C-B1] Length = 297 Score = 109 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 79/232 (34%), Gaps = 21/232 (9%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A +++A N A++SL M A QY G Y+ A+ + Y Sbjct: 35 YEYAKECFVNGKYTRAITLLNDLIVVQKGTDHAQESLYMLAMAQYKTGDYESASQAFKRY 94 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + YP+ + + Y +G S + DQ T + ++ + + A+ Sbjct: 95 MQSYPKGQYAELASYYIGESLYMSTPEPRLDQSQTVSAIAAFQEFLDLFPEAHLKNQAQK 154 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEEA 229 + +++L KE+ + Y G Y A I + L +Y + E Sbjct: 155 RLFELQDKLVKKELYSAQLYYDLGSYFGNCTSGGNNYEACIITAENALKDYPYSSMRENF 214 Query: 230 MARLVEAYVALAL----------MDEAREVVSLIQERYPQGYWARYVETLVK 271 ++++ LA +A + YP E ++ Sbjct: 215 AVLIMKSKFELAEQSVESKRLERYQDAEDECYGFINEYPDSKERSTAEKYIR 266 >gi|121730331|ref|ZP_01682694.1| hypothetical protein VCV52_0672 [Vibrio cholerae V52] gi|121627913|gb|EAX60489.1| hypothetical protein VCV52_0672 [Vibrio cholerae V52] Length = 102 Score = 109 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 29/94 (30%), Gaps = 7/94 (7%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G SS DV D ++Y +A L+ + A E +PF + + Sbjct: 16 FGCS--SSPDVVPDVPP-----SQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQ 68 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 L + Y + E + P + Sbjct: 69 VQLDLIYAYYKNDDLALGLATIERFTRLNPTHEK 102 >gi|255531053|ref|YP_003091425.1| outer membrane assembly lipoprotein YfiO [Pedobacter heparinus DSM 2366] gi|255344037|gb|ACU03363.1| outer membrane assembly lipoprotein YfiO [Pedobacter heparinus DSM 2366] Length = 309 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 93/266 (34%), Gaps = 21/266 (7%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K L + F+I + G + Q + + V Y++A+ ++N++KA F Sbjct: 5 KHVLLLSFTIIALTIAGCKSQFEKIRLSNDVAKK------YQEAMRLYNKKNYAKALILF 58 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 S+ + A + A Y Y A + + YP SK + Y+ Sbjct: 59 EDLSQKYRGRAEAEELNYHYALTLYKLKDYTTARYQFKSFADTYPTSKYAEECRYMGAYC 118 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 Y DQ T + + + Y S A Y+ + R +L K R Y Sbjct: 119 YYLDSPAPSLDQENTYKAIDALQLFINFYPKSERAADAAKYIGLLRAKLEDKAYNNARLY 178 Query: 201 LKRG-----EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DE 245 G Y AA+ + ++ D ++AEE ++++ A A +E Sbjct: 179 YDLGGYDVSNYKAAVIALKNAQIDFPDIKYAEEMDFLIIKSQFAYAKNSLETRQEDRYNE 238 Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271 A E +PQ + L K Sbjct: 239 AITYADEFVEAHPQSKLLEDAKALKK 264 >gi|256425917|ref|YP_003126570.1| outer membrane assembly lipoprotein YfiO [Chitinophaga pinensis DSM 2588] gi|256040825|gb|ACU64369.1| outer membrane assembly lipoprotein YfiO [Chitinophaga pinensis DSM 2588] Length = 302 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 78/222 (35%), Gaps = 8/222 (3%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSR-DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + K L I +A V + R + D + Y ++Y K + + A Sbjct: 1 MRKLVLYICLFVAATAAVSCNTELRRIEKSKDYEAKLAYADKLYAK-------KKYMTAQ 53 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + + + + Y Y QA + Y+ +P S + Y+ Sbjct: 54 TLYESLFQVYKGTDKYEPMYYNYCYCSYKMKDYVQAGFYFKNYLDNFPNSPRATEMDYMQ 113 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 Y + V DQ T+ + M + Y S V A + + R +L KE Sbjct: 114 AYCYYKQSPKVALDQTNTQKAIAAMQTFINNYPTSDKVPEANLVIELSRRKLEKKEYNNA 173 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 Y G Y AA F+ ++ N+ D++ ++ ++AY Sbjct: 174 ELYYNLGHYQAAAITFKSLMRNFPDSDKSDSYKYMAIKAYYN 215 Score = 35.9 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 38/112 (33%), Gaps = 12/112 (10%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY--------- 105 + +++ Y A L+ ++ A F R+FP + + M+ Y Sbjct: 164 KLEKKEYNNAELYYNLGHYQAAAITFKSLMRNFPDSDKSDSYKYMAIKAYYNYAKNSVWE 223 Query: 106 -SAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRA 154 +Y+ S ++ Y SK YY + S + I R+ Sbjct: 224 KQKERYEDVLSEYLDFADHYNASKLKGDAEKYYTLAQSNIKTIDSYNKPDRS 275 >gi|300775415|ref|ZP_07085277.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] gi|300506155|gb|EFK37291.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] Length = 331 Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 93/262 (35%), Gaps = 19/262 (7%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K+ L +F V V + ++ R D + A ++ + A Sbjct: 1 MKKYILGLFAVAVVTSCVSQQERAMRSADKDFILK---------AANENFAKKKWKNALA 51 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +++ + +A+ Y Y+ A + + +P+ + Y+ Sbjct: 52 LYDRLANLVAGTDDFPNVGFNTAYANYYDKSYKLAGHQFKNFAVSFPKDPRAEEAAYMSA 111 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 + Y + D DQ +T+L + + + Y NS K + +L K E R Sbjct: 112 LCYYEGSMDYNLDQSSTELAINELQDFLNNYPNSERSKNISQLIDELSYKLEFKAYENAR 171 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEARE 248 Y K GEY AA F VL ++ + + ++++ LA+ + A Sbjct: 172 QYYKMGEYKAANVAFDNVLEDFPSTKLRSKIYDYIMKSRYELAMKSVYNLKEERIESALT 231 Query: 249 VVSLIQERYPQGYWARYVETLV 270 L+++ P +++ L Sbjct: 232 YTKLVEKELPDTEYSKTAVDLR 253 >gi|146301211|ref|YP_001195802.1| DNA uptake lipoprotein-like protein [Flavobacterium johnsoniae UW101] gi|146155629|gb|ABQ06483.1| DNA uptake lipoprotein-like protein [Flavobacterium johnsoniae UW101] Length = 264 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 84/225 (37%), Gaps = 10/225 (4%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K + + C +++ + +E A ++KA Sbjct: 1 MKKIVSLLIVAALFCSCSEYQKALKNEDVAAK----------FEVATKMYDAGKYNKAIR 50 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F Q + + A K M + Y +Y A E +++ YP S+ V +L Sbjct: 51 LFEQLAPTYRGKPQAEKLFYMFSQSYYKTKQYYLAGYQFESFVSGYPRSEKVQEAAFLGA 110 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 SY+++ DQ T L + ++ Y NS Y+ A V + +L K E + Sbjct: 111 YSYSKLAPVYSLDQADTVKALDKLQAFIDNYPNSEYLAQANESVKILNGKLEKKAYENAK 170 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 Y +Y +A+ F +A++ E+A+ ++ LA+ Sbjct: 171 GYNTISDYKSALVAFDNFIADFPGTPLKEDALFYKYDSAYQLAIN 215 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 8/80 (10%) Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSL---- 252 Y K +Y A +F+ ++ Y +E +EA +Y LA +D+A V +L Sbjct: 76 YYKTKQYYLAGYQFESFVSGYPRSEKVQEAAFLGAYSYSKLAPVYSLDQADTVKALDKLQ 135 Query: 253 -IQERYPQGYWARYVETLVK 271 + YP + VK Sbjct: 136 AFIDNYPNSEYLAQANESVK 155 >gi|294056473|ref|YP_003550131.1| Tetratricopeptide TPR_2 repeat protein [Coraliomargarita akajimensis DSM 45221] gi|293615806|gb|ADE55961.1| Tetratricopeptide TPR_2 repeat protein [Coraliomargarita akajimensis DSM 45221] Length = 342 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 69/164 (42%), Gaps = 1/164 (0%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + + ++ + F + P++ + +L+ A V + A + I YP+S Sbjct: 156 KQYGESIKQFEGVISNAPYSDYSPLALMDIALVAEKRNDDEVAIDALDRLINFYPQSMLA 215 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 YY + +Y ++++ YDQ +T+ + Y + + S V + N LA Sbjct: 216 PDAYYTLAKTYGGLVQNAEYDQGSTRQAISYYEDYLVLFPESQSVGEVEANLKKMENLLA 275 Query: 191 AKEVEIGRYYL-KRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 + + +G +Y R AA+ + + D+E A EA R+ Sbjct: 276 SSRLLLGDFYYFHRSNNTAALVFYNETITIAPDSEAAAEAQNRI 319 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 71/222 (31%), Gaps = 21/222 (9%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 F + + + + S + + K + ++ A + F + +++P A Sbjct: 30 FGSSVSEEDLQPIRVASPEEEVAADRILNKGLSKFSAGSYGGADKQFKKVVKNYPTTESA 89 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY---VYYLVGMSYAQ----MIR 146 ++L M V +Y +A + + YP K+ + + + + I Sbjct: 90 AEALYMRGRVYMEKKRYVKAYKFLQSTVDTYPNYKDFNRVIGAQFECATALMEGARGRIF 149 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 + + ++ ++ S Y A ++I KR + Sbjct: 150 GIIPGFKQYGESIKQFEGVISNAPYSDYSPLAL--------------MDIALVAEKRNDD 195 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 AI ++ Y + A +A L + Y L E + Sbjct: 196 EVAIDALDRLINFYPQSMLAPDAYYTLAKTYGGLVQNAEYDQ 237 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 68/188 (36%), Gaps = 23/188 (12%) Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 P VA +L ++SAG Y A ++ + YP +++ Y+ G Y + R Sbjct: 47 PEEEVAADRILNKGLSKFSAGSYGGADKQFKKVVKNYPTTESAAEALYMRGRVYMEKKRY 106 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKG--------ARFYVTVGRNQLAAKEVEIGRY 199 V +++ V+ Y N A + R ++ I + Sbjct: 107 V--------KAYKFLQSTVDTYPNYKDFNRVIGAQFECATALMEGARGRIFG---IIPGF 155 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +Y +I +F+ V++N ++++ A+ + + A + + + YPQ Sbjct: 156 ----KQYGESIKQFEGVISNAPYSDYSPLALMDIALVAEKRNDDEVAIDALDRLINFYPQ 211 Query: 260 GYWARYVE 267 A Sbjct: 212 SMLAPDAY 219 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 15/164 (9%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + V ++ + + A++ K + A + ++ +P + +A + Sbjct: 159 GESIKQFEGVISNAPYSDYSPLALMDIALVAEKRNDDEVAIDALDRLINFYPQSMLAPDA 218 Query: 97 LLMSAFVQ--------YSAGKYQQAASLGEEYITQYPESKNVDYV-------YYLVGMSY 141 A Y G +QA S E+Y+ +PES++V V L+ S Sbjct: 219 YYTLAKTYGGLVQNAEYDQGSTRQAISYYEDYLVLFPESQSVGEVEANLKKMENLLASSR 278 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + + + L + + + +S A+ + Sbjct: 279 LLLGDFYYFHRSNNTAALVFYNETITIAPDSEAAAEAQNRINDI 322 >gi|255038956|ref|YP_003089577.1| outer membrane assembly lipoprotein YfiO [Dyadobacter fermentans DSM 18053] gi|254951712|gb|ACT96412.1| outer membrane assembly lipoprotein YfiO [Dyadobacter fermentans DSM 18053] Length = 320 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 99/258 (38%), Gaps = 22/258 (8%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 IA+ + + S + ++ Y+ A+ + K+ ++ +A F + Sbjct: 24 LLFIAILVVTSCSKFS-------KLQKTGTDQQKYDAAMAYYKKADYYRAGLLFEELIPL 76 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 + + + A+ QY G+Y + L +++ Y S Y+ S + Sbjct: 77 LKGSTESELAQFYYAYTQYHQGQYNTSQFLFKKFYDTYARSDYAQEALYMHAFSLYKDSS 136 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 DQ +T + M + Y +SP+ + Y+ R++L K E R Y K ++ Sbjct: 137 PYNLDQSSTFTAISAMQDFINAYPDSPFREECTRYILELRSKLEKKAYERARLYHKISDF 196 Query: 207 -----VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA----LMDEAREVVSL----- 252 +A+ + ++ D+++ EE VE+ LA + + + Sbjct: 197 NPMSLKSAVISIENFRKDFPDSQYNEELAFLKVESQYNLASNSFIDKQKERYQEVVKFYQ 256 Query: 253 -IQERYPQGYWARYVETL 269 + ++YP G + R E + Sbjct: 257 ELVDKYPTGKYNRDAERM 274 >gi|58699370|ref|ZP_00374137.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of Drosophila ananassae] gi|58534111|gb|EAL58343.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of Drosophila ananassae] Length = 150 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 11/149 (7%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +YK +T F + F + + + E+YE+AV ++ + +A Sbjct: 7 MYKTLITCFIFLICSFTQSYADDLEK-----------TETELYEEAVELFDQKKYKQAIR 55 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F++ +PF+ A K+ L+S Y+ G Y AAS ++YI Y +++ YVYYL Sbjct: 56 AFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASDMDDYIYVYSNGEDLPYVYYLRV 115 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +SY I V Q+ L+ + + Sbjct: 116 LSYYMQINKVQLGQQTAYKTLELATEYIN 144 >gi|313203409|ref|YP_004042066.1| outer membrane assembly lipoprotein yfio [Paludibacter propionicigenes WB4] gi|312442725|gb|ADQ79081.1| outer membrane assembly lipoprotein YfiO [Paludibacter propionicigenes WB4] Length = 267 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 92/261 (35%), Gaps = 22/261 (8%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + F I V L D+ Y KAV + + +F +A F+ + Sbjct: 5 SFFLLIVVLTLASCSDYQKLLKSDDAELK-------YNKAVEYFGKGDFMRATTLFDAVA 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + + L A Y A+ Y+ +P K V Y++G Y Sbjct: 58 TYYKGTERSEIVLNYLAKSYMGQKDYFSASEYYRTYVKTFPRGKFVIESKYMIGYCYYLD 117 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 D DQ T + ++ Y S VK A + ++LA K + Y G Sbjct: 118 SPDTRLDQADTYKAIAAFQEFIDIYPESELVKDATKLLDELNDKLAYKAYLSAKLYYNLG 177 Query: 205 EYV-----AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----MDEAREVVSLIQE 255 Y+ + + Q L NY ++ E+ M ++ + LA+ +A + I E Sbjct: 178 NYMGNNYESCVIAAQNGLKNYPATKYREDFMLLILNSKYELAVQSFETRKADRYRNTIDE 237 Query: 256 ------RYPQGYWARYVETLV 270 YP G + + V+ ++ Sbjct: 238 CYNYINEYPAGKYRKQVDKIL 258 >gi|167754110|ref|ZP_02426237.1| hypothetical protein ALIPUT_02401 [Alistipes putredinis DSM 17216] gi|167658735|gb|EDS02865.1| hypothetical protein ALIPUT_02401 [Alistipes putredinis DSM 17216] Length = 271 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 100/256 (39%), Gaps = 14/256 (5%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 ++ VCF + +S L S +Y+ A+ + Q +SKA F + Sbjct: 6 LYVLCTVCFAILAAGCNSVQQVLKSG----RPDHMYQTALKHYQNQKWSKAAMLFEAAAP 61 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 + M+AF ++ Y+ A S+ +++ ++ S ++ ++ +SY + Sbjct: 62 YYSGTMQEDSIAFMTAFCKFKTRDYEVATSMLDDFRRKFGRSVFLEDAEGILALSYFYLA 121 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 DQ T + ++ + Y NS R + +L K Y K G Sbjct: 122 PGPTRDQTMTTQAIVAVNEYLAHYPNSSRSDEFREMDKILTQRLHDKTYLNAYTYYKIGR 181 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA----LMDEAREVVSLIQ------E 255 Y +AI + L Y + H EE M +V++ LA +A +S + Sbjct: 182 YKSAIVALKNALKLYPTSSHREEIMYLIVKSGSKLADNSVQDKQADRYLSTLDSYYSFVA 241 Query: 256 RYPQGYWARYVETLVK 271 +P+ ++ + ++ L + Sbjct: 242 EFPESHYLKELDRLAQ 257 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 2/91 (2%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK--LM 158 A+ Y G+Y+ A + + YP S + + + YL+ S +++ + D++A + Sbjct: 173 AYTYYKIGRYKSAIVALKNALKLYPTSSHREEIMYLIVKSGSKLADNSVQDKQADRYLST 232 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 L V + S Y+K ++ L Sbjct: 233 LDSYYSFVAEFPESHYLKELDRLAQNAKDFL 263 >gi|282859702|ref|ZP_06268803.1| outer membrane assembly lipoprotein YfiO [Prevotella bivia JCVIHMP010] gi|282587513|gb|EFB92717.1| outer membrane assembly lipoprotein YfiO [Prevotella bivia JCVIHMP010] Length = 301 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 95/284 (33%), Gaps = 29/284 (10%) Query: 9 ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68 I IF + K F ++ C + + + + TD Y+ YE A Sbjct: 18 ILIFAVQIVNMKK-----SFLLSFCVALLFSSCAHEYNAVYKSTDPEYK---YEFAKELF 69 Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 + F A + ++ L M A +Y Y+ A+ +Y YP+ Sbjct: 70 AKGKFGNAIPLLQELVTIQKGTENGQECLYMLAKAEYGMKDYEAASETFRKYYQSYPKGI 129 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + +G + + DQ T +Q ++ + + + A+ + +++ Sbjct: 130 YAEMAQFNIGQCLYESTPEPRLDQTPTIAAIQAYQDYLDLFPDGKMKEVAQNRMFELQDK 189 Query: 189 LAAKEVEIGRYYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEE-AMARLVEA 236 L KE + Y G Y A I Q + +Y ++ E+ A+ + Sbjct: 190 LVKKEFLNAKLYYNLGSYFGNCTSGGNNYEACIITAQNAINDYPYSKLREDFAILIMKSK 249 Query: 237 YVALALMDEAREVVSL---------IQERYPQGYWARYVETLVK 271 Y + E ++V +YP + E +K Sbjct: 250 YELAQMSIEQKKVQRFQDAEDECYGFINQYPDSKERKTAEAYIK 293 >gi|225849252|ref|YP_002729416.1| DNA uptake lipoprotein [Sulfurihydrogenibium azorense Az-Fu1] gi|225644324|gb|ACN99374.1| DNA uptake lipoprotein [Sulfurihydrogenibium azorense Az-Fu1] Length = 308 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 82/239 (34%), Gaps = 22/239 (9%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QC 83 +F I F+ + T+V +E K + ++ ++ KA E Sbjct: 4 IVFLGILSAFMFSCGSK----------TEVYVGQEKLSKGLTLYQKGDYKKAKEELKNAI 53 Query: 84 SRDFPFAGVARKSLLM-----SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + + + LM A Y+ +Y A EE+I +P S + Y + Sbjct: 54 FK----SEGLTPAQLMEARFALADSYYNREEYVDAIVEFEEFIALFPTSPKIPEALYKLA 109 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 MSY + D D + I++ Y +S YV A+ + A + I Sbjct: 110 MSYLFVSPDYKRDLTYVNKAEEKAQEIIDNYPDSKYVAAAKEIIKKVNEIKAKHTLYIAE 169 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA--YVALALMDEAREVVSLIQE 255 Y K G+ +A ++ + Y D + + +L E + I+E Sbjct: 170 TYEKYGKPYSAAVYYEEAYSKYKDYIQKDYVIYKLAYNLVNSQYQYTQEIEKYKKQIKE 228 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 8/86 (9%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV--------ALALMDE 245 + Y R EYV AI F+ +A + + EA+ +L +Y+ L +++ Sbjct: 69 FALADSYYNREEYVDAIVEFEEFIALFPTSPKIPEALYKLAMSYLFVSPDYKRDLTYVNK 128 Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271 A E I + YP + + ++K Sbjct: 129 AEEKAQEIIDNYPDSKYVAAAKEIIK 154 >gi|213026854|ref|ZP_03341301.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 93 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 43/92 (46%) Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NS Y A + +++LA E + YY RG +VA + R + +L NY D + + Sbjct: 2 YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRD 61 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 A+ + AY + L +A +V +I Sbjct: 62 ALPLMENAYRQMQLNAQADKVAKIIAANSKNT 93 >gi|228469797|ref|ZP_04054755.1| putative lipoprotein protein [Porphyromonas uenonis 60-3] gi|228308636|gb|EEK17387.1| putative lipoprotein protein [Porphyromonas uenonis 60-3] Length = 271 Score = 105 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 76/216 (35%), Gaps = 5/216 (2%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 + + L W +S + + Y A + E +S+ E + Sbjct: 6 LLRILVLSCWLLCTSSCAEYMRIQKSKDPTLRYSYAKKYYNEGKYSRVAELMVDVLPHYE 65 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 ++L + A + AA ++YP+ Y G++ ++ D Sbjct: 66 GTQEGAQALYIMADALLQNKQESSAAEYFRRLYSKYPQDARAAEARYKTGLALYRIAPDP 125 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG---- 204 DQ T L+ + +E Y S + K + ++ LA KE+ Y G Sbjct: 126 RLDQSITYSALKELQGFLEAYPQSEHRKEVEQMLFDLQDNLAKKELITADLYYNLGTYIG 185 Query: 205 -EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 Y++AI + L Y +H E+ + +VEA Sbjct: 186 NNYISAIITARNALKAYPYTKHREDLLFIIVEASYQ 221 >gi|260063113|ref|YP_003196193.1| hypothetical protein RB2501_16029 [Robiginitalea biformata HTCC2501] gi|88784682|gb|EAR15852.1| conserved hypothetical lipoprotein [Robiginitalea biformata HTCC2501] Length = 280 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 69/182 (37%), Gaps = 6/182 (3%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A +E ++ KA Q + F + + A + G Y A E + Sbjct: 37 YELAERLYQEGSYKKANRLLEQIAPQFVGKPQGERVMFFLADSYFQKGDYNFAGYQFERF 96 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + YP+S +L SY + DQ T L + + Y S +++ A Sbjct: 97 LKSYPKSDKAPEAAFLGAKSYYMLSPRYSLDQTDTDKALNKLQVFINAYPESEFMEEANA 156 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEY------VAAIPRFQLVLANYSDAEHAEEAMARLV 234 + K EI R ++K G+Y ++AI ++++ + + EEA + Sbjct: 157 MAQELTRKKQKKAFEIARQFVKLGKYYTLDYNISAIAALDNFISDHPGSVYREEAYFLRL 216 Query: 235 EA 236 A Sbjct: 217 RA 218 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 30/92 (32%), Gaps = 2/92 (2%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV--GMSYAQMIRDVPYDQRATKLMLQY 161 Y+ A + + +I+ +P S + Y+L S + + Sbjct: 182 YYTLDYNISAIAALDNFISDHPGSVYREEAYFLRLRAASTLAENSTPSKKKERLDNAVAA 241 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + + Y S + + AR + ++ E Sbjct: 242 YNAFMRYYAESEFAEDARQLYADLQEEITEFE 273 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 8/86 (9%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA--------LMDE 245 + Y ++G+Y A +F+ L +Y ++ A EA ++Y L+ D+ Sbjct: 74 FFLADSYFQKGDYNFAGYQFERFLKSYPKSDKAPEAAFLGAKSYYMLSPRYSLDQTDTDK 133 Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271 A + + YP+ + + + Sbjct: 134 ALNKLQVFINAYPESEFMEEANAMAQ 159 >gi|196231811|ref|ZP_03130667.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] gi|196223933|gb|EDY18447.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] Length = 419 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 56/156 (35%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 +A F ++ PF+ +A S Y +A + T+YP Sbjct: 152 QRAQAMFESIVKNAPFSKLAPLSQFNVGQALEKQNDYPKAIEAYQAVYTKYPNDPVAADA 211 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Y VG A+ R+ YD + + RY NS V A + Sbjct: 212 LYQVGYVRAKDAREGSYDPATNRKAREAFEDFTARYPNSEKVAQANENIRNLEGGTNKNI 271 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 ++I ++Y K ++ +A+ + V+ + AE A Sbjct: 272 LDIAKFYDKTRKFKSAVIYYNDVIKAQPGSPEAEYA 307 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 78/234 (33%), Gaps = 36/234 (15%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V D E +KA N S AY+ + + F + +A K+ + Sbjct: 36 VEGDDTAVAGSAAEQMKKAEKLEASGNDSGAYKSYKALVKRFGQSFLAPKAQRKVGMLLE 95 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYV---------YYLVGMSYAQMIRDVPYDQRATK 156 Y +A Y+T+YP+ ++ D V +L G + + VP + Sbjct: 96 KHHDYDKAFDAYNSYLTKYPQGEDFDAVVDSMFKIAKLFLEG--QKRKVFGVPVGPSMQR 153 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 IV+ S ++ +G+ K+ +Y AI +Q V Sbjct: 154 -AQAMFESIVKNAPFSKLAPLSQ--------------FNVGQALEKQNDYPKAIEAYQAV 198 Query: 217 LANYSDAEHAEEAMARLVE---------AYVALALMDEAREVVSLIQERYPQGY 261 Y + A +A+ ++ +Y A +ARE RYP Sbjct: 199 YTKYPNDPVAADALYQVGYVRAKDAREGSYDP-ATNRKAREAFEDFTARYPNSE 251 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 58/158 (36%), Gaps = 14/158 (8%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + ++ + K+ ++ KA E + +P VA +L +V Sbjct: 159 ESIVKNAPFSKLAPLSQFNVGQALEKQNDYPKAIEAYQAVYTKYPNDPVAADALYQVGYV 218 Query: 104 QYSA---GKYQ-----QAASLGEEYITQYPESKNVDYV----YYLVGMSYAQMIRDV-PY 150 + G Y +A E++ +YP S+ V L G + ++ Y Sbjct: 219 RAKDAREGSYDPATNRKAREAFEDFTARYPNSEKVAQANENIRNLEGGTNKNILDIAKFY 278 Query: 151 DQ-RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 D+ R K + Y + +++ SP + A+ + +N Sbjct: 279 DKTRKFKSAVIYYNDVIKAQPGSPEAEYAKGRIEALKN 316 >gi|289548801|ref|YP_003473789.1| outer membrane assembly lipoprotein YfiO [Thermocrinis albus DSM 14484] gi|289182418|gb|ADC89662.1| outer membrane assembly lipoprotein YfiO [Thermocrinis albus DSM 14484] Length = 301 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 72/186 (38%), Gaps = 6/186 (3%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQ----CSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + +++Y + + +++ KA E + P + + A Y Y Sbjct: 29 KIAQDLYSEGMAAYASRDYGKAIERLKEALRYLENLTP--SQIKDAKYAIADSYYMKKDY 86 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A E+++ YP + +Y + SY ++ D DQ T L + +Y Sbjct: 87 VNAVVYLEDFVASYPGLPETERAFYQLVDSYMKVAPDAYRDQSYTLKALDKAREFLSKYP 146 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 +SPY + +LA + I R+Y G Y +A R++ +L NY + E Sbjct: 147 SSPYADKVGDLIQQAVEKLAKHQYLIARFYEDYGYYYSAALRYRDLLINYPEQISDAEVS 206 Query: 231 ARLVEA 236 R + + Sbjct: 207 YRYIRS 212 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 16/90 (17%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA------------LA 241 I Y + +YV A+ + +A+Y E A +LV++Y+ L Sbjct: 74 YAIADSYYMKKDYVNAVVYLEDFVASYPGLPETERAFYQLVDSYMKVAPDAYRDQSYTLK 133 Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271 +D+ARE +S +YP +A V L++ Sbjct: 134 ALDKAREFLS----KYPSSPYADKVGDLIQ 159 >gi|256820330|ref|YP_003141609.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga ochracea DSM 7271] gi|256581913|gb|ACU93048.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga ochracea DSM 7271] Length = 268 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 83/220 (37%), Gaps = 10/220 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A K + + KA F Q + ++ + M Y +Y A+ E Sbjct: 35 YTEAEKLYKAKKYKKATRLFEQIASEYAGKPQGERIYYMFGDSYYQLKQYSLASYQFERL 94 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP S+ +L S DQ T L+ + ++RY++S Y K A Sbjct: 95 QKLYPRSEKATESAFLEAKSLYLETPKYSVDQTYTYQALEKLQYFLDRYSDSEYAKEANE 154 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYV- 238 +L KE EI + Y + +Y AA+ L N + E+A+ RL AY Sbjct: 155 LALDLVTRLEKKEFEIAKQYDQIRDYQAAMKSLDNFLTNNPGSAFREDALYTRLHSAYEW 214 Query: 239 --------ALALMDEAREVVSLIQERYPQGYWARYVETLV 270 ++ A+E + YP+ + + E ++ Sbjct: 215 AINSIETKKEERLNTAKEAYDNLLRAYPETKYKKEAENML 254 >gi|315223392|ref|ZP_07865249.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga ochracea F0287] gi|314946565|gb|EFS98556.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga ochracea F0287] Length = 268 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 83/220 (37%), Gaps = 10/220 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A K + + KA F Q + ++ + M Y +Y A+ E Sbjct: 35 YTQAEKLYKAKKYKKATRLFEQIASEYAGKPQGERIYYMFGDSYYQLKQYSLASYQFERL 94 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP S+ +L S DQ T L+ + ++RY++S Y K A Sbjct: 95 QKLYPRSEKATESAFLEAKSLYLETPKYSVDQTYTYQALEKLQYFLDRYSDSEYAKEANE 154 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYV- 238 +L KE EI + Y + +Y AA+ L N + E+A+ RL AY Sbjct: 155 LALDLVTRLEKKEFEIAKQYDQIRDYQAAMKSLDNFLTNNPGSVFREDALYTRLHSAYEW 214 Query: 239 --------ALALMDEAREVVSLIQERYPQGYWARYVETLV 270 ++ A+E + YP+ + + E ++ Sbjct: 215 AINSIETKKEERLNTAKEAYDNLLRAYPETKYKKEAENML 254 >gi|188995218|ref|YP_001929470.1| hypothetical protein PGN_1354 [Porphyromonas gingivalis ATCC 33277] gi|188594898|dbj|BAG33873.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 310 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 52/277 (18%), Positives = 98/277 (35%), Gaps = 23/277 (8%) Query: 9 ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68 +C ++ Q + + F A+ FL + R + Y A F Sbjct: 29 LCEVKSIIRQKQMTSRKLIFFAALTFLFASCGEFVRIQQSPDTSLK------YSYAKKFY 82 Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 E+ +SKA + + + + A + A +EY +YP+ Sbjct: 83 NERKYSKAASLLEDVRGIYDGTSEGEQLMFLLAECYLEMRRDADAGICYQEYYNKYPKGL 142 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + Y G + + D DQ T L +Q + ++ + N Y K A + +++ Sbjct: 143 RAEEARYKAGYCFYEASPDSRLDQSDTYLAIQELQSYLDFFPNGKYAKEAENMLFGLQDK 202 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPR-----FQLVLANYSDAEHAEEAMARLVEA------- 236 LA KE + Y G Y+ R + L Y +H EE + +++A Sbjct: 203 LAYKEYRTAKLYYNLGLYLGNNYRSCIVTAEAALKTYPYTKHREELVFLMLQAMYEEASF 262 Query: 237 ----YVALALMDEAREVVSLIQERYPQGYWARYVETL 269 + D A + + I E +P G + + + + Sbjct: 263 SVSEKLQTRYRDVADQYFAYINE-FPNGKYLKQAKKI 298 >gi|288818733|ref|YP_003433081.1| DNA uptake lipoprotein [Hydrogenobacter thermophilus TK-6] gi|288788133|dbj|BAI69880.1| DNA uptake lipoprotein [Hydrogenobacter thermophilus TK-6] gi|308752320|gb|ADO45803.1| outer membrane assembly lipoprotein YfiO [Hydrogenobacter thermophilus TK-6] Length = 298 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 94/227 (41%), Gaps = 13/227 (5%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ--- 82 I F + + G + + + E Y++ ++ +++SKA E + Sbjct: 4 ILFITLLALVFGCAKMTEEKR-------AKLAIEYYQEGMVAYANRDYSKAVERLKEALK 56 Query: 83 -CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 P + + + A Y Y A E+++ YP+ + Y+++ SY Sbjct: 57 YLENLTPQQI--KDAKYVIAESYYMNKDYINAVVYFEDFLFYYPDVSESEKAYFMLVDSY 114 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 ++ D DQ T + + + ++ SPY + R + + +LA E IGR+Y Sbjct: 115 MKVAPDPYRDQTYTLKAIDKVKDFLSKFPQSPYAERVRAIMEDAQRKLARHEYLIGRFYE 174 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 G Y +A R++ +L NY + E R +++ + + L + +E Sbjct: 175 DFGYYYSASLRYRDLLINYPEQVSDVEVSFRYIKSLLLVRLQAKRQE 221 >gi|189502538|ref|YP_001958255.1| hypothetical protein Aasi_1196 [Candidatus Amoebophilus asiaticus 5a2] gi|189497979|gb|ACE06526.1| hypothetical protein Aasi_1196 [Candidatus Amoebophilus asiaticus 5a2] Length = 267 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 92/250 (36%), Gaps = 20/250 (8%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 I + L + YL Y++AV + +++ +A + F + Sbjct: 6 FIKIGLIGLALASCATHTHSGNYLSK----------YQQAVARYEAKDYYEALQLFKEVI 55 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + A+ + Y+ +A E + YP + Y+ G S Sbjct: 56 PMLKGRKEIIPAQFYQAYAYFYQKSYKMSAYCFESFYKTYPRLAQAEEALYMQGYSLYLS 115 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 I D+ DQ T+ L+ + + +Y + Y + A Y +N+L K + + Y + G Sbjct: 116 IPDIRLDQAVTEKALKTLQTYLNKYPSGTYQQEAHQYNDELQNKLMLKSFKAAKLYYELG 175 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE----------VVSLIQ 254 Y AA+ Y ++ + EEA+ ++A AL E +E + Sbjct: 176 HYKAAVIALGNFREKYPESIYQEEALCLQIQAQYKWALGSEVKEQPDRLYAVVNYYYIFL 235 Query: 255 ERYPQGYWAR 264 +++P + + Sbjct: 236 DKFPNSKYLK 245 >gi|332291070|ref|YP_004429679.1| outer membrane assembly lipoprotein YfiO [Krokinobacter diaphorus 4H-3-7-5] gi|332169156|gb|AEE18411.1| outer membrane assembly lipoprotein YfiO [Krokinobacter diaphorus 4H-3-7-5] Length = 270 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 47/220 (21%), Positives = 83/220 (37%), Gaps = 14/220 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A + + KA + Q + A + + A Y G Y E + Sbjct: 33 YEFADSLYSQGKYKKALRLWEQIVPLYRGRPQAERVTYLYANTFYELGDYYSGGYQFERF 92 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +P+S + + SY + DQ T + L+ + + Y +S V A Sbjct: 93 VKSFPQSTKREEAAFKSAESYYRRSPRFNLDQGDTYIALEKLQGFINEYPDSEQVDDANA 152 Query: 181 YVTVGRNQLAAKEVEIGRYYLK----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +L K EI + Y K RG + AI F L + + + E+A+ + Sbjct: 153 KVQELNTKLERKSYEIAKGYNKIGASRGTFPNAISAFDNFLLDNPGSIYREDALYWKFNS 212 Query: 237 YVALAL----------MDEAREVVSLIQERYPQGYWARYV 266 LA+ ++ A+ + +++ YPQG +A Sbjct: 213 AYQLAMGSVKRLQVERLEAAKAAYNALEKYYPQGKYADEA 252 Score = 42.0 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 2/87 (2%) Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-IRDVPYDQ-RATKLMLQYMSRIVE 167 + A S + ++ P S + Y S Q+ + V Q + + + + Sbjct: 182 FPNAISAFDNFLLDNPGSIYREDALYWKFNSAYQLAMGSVKRLQVERLEAAKAAYNALEK 241 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEV 194 Y Y A + +L AK++ Sbjct: 242 YYPQGKYADEAAKEIAEVNEELQAKDL 268 >gi|313886707|ref|ZP_07820417.1| outer membrane assembly lipoprotein YfiO [Porphyromonas asaccharolytica PR426713P-I] gi|312923869|gb|EFR34668.1| outer membrane assembly lipoprotein YfiO [Porphyromonas asaccharolytica PR426713P-I] Length = 270 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 70/184 (38%), Gaps = 5/184 (2%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A + E +S+ E + ++L + A + AA Sbjct: 37 YSYAKKYYNEGKYSRVAELMVDVLPHYEGTQEGAQALYIMADALLQNKQESSAAEYFRRL 96 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 T+YP+ +Y G++ ++ D DQ T L+ + +E Y + + K Sbjct: 97 YTKYPQDPRATEAHYKTGLALYRIAPDPRLDQSVTYSALKELQSFLETYPQNEHRKEVEQ 156 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG-----EYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + ++ LA KE+ Y G Y++AI + L +Y +H E+ + +VE Sbjct: 157 MLFDLQDNLAKKELNTADLYYNLGTYLGNNYISAIITARNALKSYPYTKHREDLLFIIVE 216 Query: 236 AYVA 239 A Sbjct: 217 ASYQ 220 >gi|145641510|ref|ZP_01797088.1| conserved hypothetical lipoprotein [Haemophilus influenzae R3021] gi|145273801|gb|EDK13669.1| conserved hypothetical lipoprotein [Haemophilus influenzae 22.4-21] Length = 129 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 7/116 (6%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G S+DV SV E+Y K L+E ++S+A Y + FP + + Sbjct: 17 IGCSS-GSKDVEQASV------NELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQ 69 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 ++L + Y Y Q + + ++ Q+P+S N Y Y+ G++ A + D Sbjct: 70 AMLDLIYANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQD 125 >gi|332300044|ref|YP_004441965.1| outer membrane assembly lipoprotein YfiO [Porphyromonas asaccharolytica DSM 20707] gi|332177107|gb|AEE12797.1| outer membrane assembly lipoprotein YfiO [Porphyromonas asaccharolytica DSM 20707] Length = 270 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 69/184 (37%), Gaps = 5/184 (2%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A + E + + E + ++L + A + AA Sbjct: 37 YSYAKKYYNEGKYGRVAELMVDVLPHYEGTQEGAQALYIMADALLQNKQESSAAEYFRRL 96 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 T+YP+ +Y G++ ++ D DQ T L+ + +E Y + + K Sbjct: 97 YTKYPQDPRATEAHYKTGLALYRIAPDPRLDQSVTYSALKELQSFLETYPQNEHRKEVEQ 156 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG-----EYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + ++ LA KE+ Y G Y++AI + L +Y +H E+ + +VE Sbjct: 157 MLFDLQDNLAKKELNTADLYYNLGTYLGNNYISAIITARNALKSYPYTKHREDLLFIIVE 216 Query: 236 AYVA 239 A Sbjct: 217 ASYQ 220 >gi|299140559|ref|ZP_07033697.1| lipoprotein [Prevotella oris C735] gi|298577525|gb|EFI49393.1| lipoprotein [Prevotella oris C735] Length = 283 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 72/191 (37%), Gaps = 11/191 (5%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A + +++A A++SL M A +Y + Y+ AA + Y Sbjct: 35 YEFAKECYAKGRYTQAITLLTDLINIQKGTDNAQESLYMLAMAEYGSMDYEGAAQAFKRY 94 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP+ + +Y G+S + + DQ T + ++ Y ++ A+ Sbjct: 95 YQSYPKGYLAEMAHYYEGLSLYKSTPEPRLDQSMTVSAINAFQTYLDLYPDAKLKPEAQK 154 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEEA 229 Y+ +++L KE+ R Y G Y A I Q L +Y EE Sbjct: 155 YLFELQDKLVLKELYSARLYYNLGPYFGNCSDGGNNYEACIVTCQNALKDYPYTALREEF 214 Query: 230 MARLVEAYVAL 240 L+++ L Sbjct: 215 SLLLMKSKFEL 225 >gi|281423192|ref|ZP_06254105.1| putative lipoprotein [Prevotella oris F0302] gi|281402528|gb|EFB33359.1| putative lipoprotein [Prevotella oris F0302] Length = 286 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 72/191 (37%), Gaps = 11/191 (5%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A + +++A A++SL M A +Y + Y+ AA + Y Sbjct: 38 YEFAKECYAKGRYTQAITLLTDLINIQKGTDNAQESLYMLAMAEYGSMDYEGAAQAFKRY 97 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP+ + +Y G+S + + DQ T + ++ Y ++ A+ Sbjct: 98 YQSYPKGYLAEMAHYYEGLSLYKSTPEPRLDQSMTVSAINAFQTYLDLYPDAKLKPEAQK 157 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEEA 229 Y+ +++L KE+ R Y G Y A I Q L +Y EE Sbjct: 158 YLFELQDKLVLKELYSARLYYNLGPYFGNCSDGGNNYEACIVTCQNALKDYPYTALREEF 217 Query: 230 MARLVEAYVAL 240 L+++ L Sbjct: 218 SLLLMKSKFEL 228 >gi|149278759|ref|ZP_01884894.1| conserved hypothetical lipoprotein [Pedobacter sp. BAL39] gi|149230378|gb|EDM35762.1| conserved hypothetical lipoprotein [Pedobacter sp. BAL39] Length = 309 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 91/268 (33%), Gaps = 25/268 (9%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K L + F+I + G + Q + + V Y++A+ ++N+SKA F Sbjct: 5 KHLLILSFTIIALTIAGCKSQFEKIRLSNDVAKK------YQEAMRLYNKKNYSKAIILF 58 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQ--YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 S+ + A L + Y Y A + + YP SK + YL Sbjct: 59 EDLSQKYRGRAEAED--LNYYYSLTLYKLKDYTTARYQFKSFADTYPTSKYAEECRYLGA 116 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 Y DQ T + + + Y S A Y+ RN+L K + Sbjct: 117 YCYYLESPIWSLDQENTYKAIDALQLFINFYPKSERAADASKYIADLRNKLETKAFNNAK 176 Query: 199 YYLKRG-----EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM---------- 243 Y G Y +A+ + ++ D + AEE +V++ A A Sbjct: 177 LYYTLGGYDINNYKSAVIALKNAQIDFPDIKFAEEMDLLIVKSQFAYAKNSYETRQEDRY 236 Query: 244 DEAREVVSLIQERYPQGYWARYVETLVK 271 EA E +P+ + L K Sbjct: 237 SEAITYADEFIESHPESKLLPEAQELKK 264 >gi|126661830|ref|ZP_01732829.1| TPR repeat protein [Flavobacteria bacterium BAL38] gi|126625209|gb|EAZ95898.1| TPR repeat protein [Flavobacteria bacterium BAL38] Length = 264 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 90/256 (35%), Gaps = 17/256 (6%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 I F FL+ D ++YE + KA + Q + Sbjct: 4 VISFLFIAFFLISCSEYQKALKSDDVAVKNEAANKMYE-------SGKYLKAIRLYEQIA 56 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + A + + Y + +Y A E ++ YP+S+ + + + ++ Sbjct: 57 PAYKGKPSAERMFYFYSMALYKSNQYYLAGYQLENFVATYPKSEKREESAFYAAECFYKL 116 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 DQ T L M ++ Y +S ++ A YV R +L K EI + Y Sbjct: 117 SPKYSLDQTDTSKALDKMQHFIDVYPDSQFLTQANVYVKELREKLEKKAFEIAKQYNTIS 176 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEAREVVSLIQ 254 +Y A+ + LA+Y E+A+ +++ LA+ A+ + + Sbjct: 177 DYKGALKALENFLADYPGTPFKEQALYYRLDSAYNLAINSIELKKQERLSYAKSTYANLV 236 Query: 255 ERYPQGYWARYVETLV 270 + Q + + ++ Sbjct: 237 KFNEQSEYKEKADKML 252 >gi|15606494|ref|NP_213874.1| hypothetical protein aq_1273 [Aquifex aeolicus VF5] gi|18202108|sp|O67310|Y1273_AQUAE RecName: Full=UPF0169 lipoprotein aq_1273; Flags: Precursor gi|2983713|gb|AAC07276.1| putative protein [Aquifex aeolicus VF5] Length = 306 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 75/179 (41%), Gaps = 3/179 (1%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRD--FPFAGVARKSLLMSAFVQYSAGKYQQA 113 Y +E YEK + ++ ++ A F + +K + Y Y A Sbjct: 32 YAKEFYEKGLSEYRKGDYGDAKSNFEKALNYLEHLTPEQIKKVKYLLVKSAYKDKDYVDA 91 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 E+++ YP SK + V+Y++ S ++ D DQ T ++ + +Y +S Sbjct: 92 VVYAEDFLANYPGSKEAEEVFYILVDSLVKVAPDPYRDQTYTVEAIRKAKEFLAKYPDSR 151 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 + + + +LA E I ++Y + G A R++ VL N+ + +EE +A Sbjct: 152 FTRKVEEVIEEANKKLAYHEYYIAKFYEEYGYPYNAAIRYREVLINFPEY-FSEERLAY 209 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 49/146 (33%), Gaps = 28/146 (19%) Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 +Y G+S + D + + L Y+ + V + A Sbjct: 36 FYEKGLSEYRK-GDYGDAKSNFEKALNYLEHL---------TPEQIKKVKYLLVKSA--- 82 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA--------YVALALMDE 245 K +YV A+ + LANY ++ AEE LV++ Y E Sbjct: 83 -------YKDKDYVDAVVYAEDFLANYPGSKEAEEVFYILVDSLVKVAPDPYRDQTYTVE 135 Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271 A +YP + R VE +++ Sbjct: 136 AIRKAKEFLAKYPDSRFTRKVEEVIE 161 >gi|325852010|ref|ZP_08171093.1| outer membrane assembly lipoprotein YfiO [Prevotella denticola CRIS 18C-A] gi|325484566|gb|EGC87482.1| outer membrane assembly lipoprotein YfiO [Prevotella denticola CRIS 18C-A] Length = 290 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 52/286 (18%), Positives = 94/286 (32%), Gaps = 29/286 (10%) Query: 7 RAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66 R IC F + + K L I +C + + + T+ Y+ YE A Sbjct: 5 RIICNFALQSQIMKKRIL-----IGICAALLCTSCAHEYNQVYKTTNNDYK---YEFAKE 56 Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 + + A A++ L M +Y YQ A+ ++Y YP Sbjct: 57 CFAKGKYGFAVPLLQDLVTVEKGTDNAQECLYMLGMAEYGLKDYQAASETFKKYYQTYPR 116 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + + + +G S + + DQ T + ++ Y N A+ + + Sbjct: 117 GQYAEMASFYIGQSLFEGTPEPRLDQTPTVAAIAAFQDYLDIYPNGKLKGTAQQRLFELQ 176 Query: 187 NQLAAKEVEIGRYYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEE-AMARLV 234 ++L KE + Y G Y A I Q L +Y + E+ A+ + Sbjct: 177 DKLIRKEYLSAKLYYNLGSYFGNCTSGGNNYEACIITAQNALNDYPYSNMREDFAVLVMK 236 Query: 235 EAYVALALMDEAREVVSL---------IQERYPQGYWARYVETLVK 271 Y + EA+++ YP + E +K Sbjct: 237 SKYELAQMSVEAKKLQRFQDAEDECYGFINEYPDSKERKTAEEYIK 282 >gi|317502715|ref|ZP_07960826.1| conserved hypothetical protein [Prevotella salivae DSM 15606] gi|315666159|gb|EFV05715.1| conserved hypothetical protein [Prevotella salivae DSM 15606] Length = 290 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 47/233 (20%), Positives = 82/233 (35%), Gaps = 16/233 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 ++ I I V L Q VY + YE A E +++A Sbjct: 1 MFDMKKKILIPICVTLLFTSCAQEFNKVYKTDNYQYK-----YEFAKECYAEGKYTQAIT 55 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 A++SL M A +Y + Y+ A+ + Y YP+ + +Y G Sbjct: 56 LLTDLINIEKGTDNAQESLYMLAMAEYGSMDYEGASQAFKRYYQSYPKGYLAEMAHYYEG 115 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 ++ + + DQ T + ++ Y ++ A+ Y+ +++L KE+ R Sbjct: 116 LALYKSTPEPRLDQSMTISAINAFQTFLDLYPDAKLRPEAQKYLFELQDKLVLKELYSAR 175 Query: 199 YYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 Y G Y A I Q L +Y EE L+++ L Sbjct: 176 LYYNLGPYFGNCSDGGNNYEARIVTCQNALKDYPYTSLREEFSLLLMKSKFEL 228 >gi|313157575|gb|EFR56991.1| outer membrane assembly lipoprotein YfiO [Alistipes sp. HGB5] Length = 273 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 91/225 (40%), Gaps = 10/225 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +Y KA+ + +++ +S+A F + +A +Y Y AA+L Sbjct: 33 PDLIYSKALEYYQKEKWSRASTLFEGVQHYYSGTPREDSISFFNARCKYKNRDYDTAATL 92 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 +++ ++ S ++ + + + + DQ T L ++ + RY +S ++ Sbjct: 93 LDDFRRKFGRSAFIEDAEGMYALCFYYLSPGPSRDQTMTGQALIAINEFMSRYPHSEQIE 152 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 + T +L K Y K G Y +AI + L Y ++ H EE M +V+A Sbjct: 153 NFKTINTELTQRLHDKAYLNAYTYYKIGRYKSAIVSLKNALKQYPESSHREEIMYLIVDA 212 Query: 237 YVALALMDEARE----VVSLI------QERYPQGYWARYVETLVK 271 A A + ++++ +E +P+ + V+ + + Sbjct: 213 SYRFASNSVAEKQTDRYLAMLDSYLSFKEEFPESKHIKEVDRMAQ 257 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 3/97 (3%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG-MSYAQMIRDVPYDQR 153 K+ L A+ Y G+Y+ A + + QYPES + + + YL+ SY V Q Sbjct: 168 KAYLN-AYTYYKIGRYKSAIVSLKNALKQYPESSHREEIMYLIVDASYRFASNSVAEKQT 226 Query: 154 ATKLM-LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 L L E + S ++K R+ L Sbjct: 227 DRYLAMLDSYLSFKEEFPESKHIKEVDRMAQHARDYL 263 >gi|163782371|ref|ZP_02177369.1| hypothetical protein HG1285_06275 [Hydrogenivirga sp. 128-5-R1-1] gi|159882404|gb|EDP75910.1| hypothetical protein HG1285_06275 [Hydrogenivirga sp. 128-5-R1-1] Length = 307 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 2/184 (1%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD--FPFAGVARKSLLMSAFVQYSAGKYQQ 112 + +E Y +A+ KE+++ A FN+ + + + + A Y G Y Sbjct: 30 KKAQEYYREALSAYKEKDYGDAAWNFNEALKYMDYLTPKQIENAKFLLAKSYYYDGDYVN 89 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A E+YI YP+ + + +YL+ SY + D DQ T ++ + R+ NS Sbjct: 90 AVVALEDYIFYYPKLRRTEEAFYLLIDSYINVSPDPYRDQEYTWKAIEKAKEFLSRFPNS 149 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 + + + ++A E+ I ++Y G +A R++ VL N+ E R Sbjct: 150 TFAPKVQKLIDKAYRKIAQHELYIAKFYEDYGYTYSAALRYREVLINFPGHVSESEVAYR 209 Query: 233 LVEA 236 + Sbjct: 210 YIRC 213 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 47/133 (35%), Gaps = 15/133 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVK------GARFYVTVGR-NQLAAKEVEIGRYYLKRGE 205 K +Y + Y Y A Y+ Q+ + + + Y G+ Sbjct: 27 ERAKKAQEYYREALSAYKEKDYGDAAWNFNEALKYMDYLTPKQIENAKFLLAKSYYYDGD 86 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD--------EAREVVSLIQERY 257 YV A+ + + Y EEA L+++Y+ ++ +A E R+ Sbjct: 87 YVNAVVALEDYIFYYPKLRRTEEAFYLLIDSYINVSPDPYRDQEYTWKAIEKAKEFLSRF 146 Query: 258 PQGYWARYVETLV 270 P +A V+ L+ Sbjct: 147 PNSTFAPKVQKLI 159 >gi|307565537|ref|ZP_07628017.1| outer membrane assembly lipoprotein YfiO [Prevotella amnii CRIS 21A-A] gi|307345696|gb|EFN91053.1| outer membrane assembly lipoprotein YfiO [Prevotella amnii CRIS 21A-A] Length = 309 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 47/288 (16%), Positives = 94/288 (32%), Gaps = 29/288 (10%) Query: 5 LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64 + R I IF + + K +I S V + VY + + + YE A Sbjct: 22 ISRIILIFASQIVNMKK---SIILSFCVALIFCSCAHEYNVVYKSADPEYK-----YEFA 73 Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 + F+ ++SL M A +Y Y A+ + ++Y Y Sbjct: 74 KELFVKGKFASVIPLLQDLVVTLKGTENGQESLYMLAKAEYGMKDYDAASEIFKKYYQSY 133 Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 P+ + + +G + + DQ T +Q ++ + + + A+ + Sbjct: 134 PKGIYAEMAQFNIGQCLYENAPEPRLDQTPTIAAIQAFQDYLDLFPDGKMKEKAQERMFE 193 Query: 185 GRNQLAAKEVEIGRYYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEE-AMAR 232 +++L KE + Y G Y A + Q + +Y + EE A+ Sbjct: 194 LQDKLVKKEYLNAKLYYNLGSYFGNCTSGGNNYEACVITAQNAINDYPYSNLREEFAILI 253 Query: 233 LVEAYV---------ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + + L +A + ++P E +K Sbjct: 254 MKSKFELAHMSVDAKKLQRFQDAEDECYGFINQFPDSKERHTAEEYIK 301 >gi|188996909|ref|YP_001931160.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931976|gb|ACD66606.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 311 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 68/200 (34%), Gaps = 11/200 (5%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN--Q 82 + F I+ ++ D + +E K + K+ + KA E Sbjct: 4 FVVFLISGLVIISCA---------DKGQKLYEGQEKLSKGLELYKKGEYKKAKEELKNAI 54 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 ++ A Y+ +Y A EE+I +P S + Y + MSY Sbjct: 55 FKSQGLTPAQIMEARFALADSYYNREEYIDAIVEFEEFIALFPTSPRMPEALYKLAMSYL 114 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + D D + I+ Y +S YVK A+ + A + I Y K Sbjct: 115 FVSPDYKRDMTYVNKAQEKAEEIISSYPDSKYVKAAKEILKKINEIKAKHTLYIAETYEK 174 Query: 203 RGEYVAAIPRFQLVLANYSD 222 G+ +A +Q NY D Sbjct: 175 YGKPYSASVYYQEAYTNYKD 194 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 8/86 (9%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV--------ALALMDE 245 + Y R EY+ AI F+ +A + + EA+ +L +Y+ + +++ Sbjct: 70 FALADSYYNREEYIDAIVEFEEFIALFPTSPRMPEALYKLAMSYLFVSPDYKRDMTYVNK 129 Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271 A+E I YP + + + ++K Sbjct: 130 AQEKAEEIISSYPDSKYVKAAKEILK 155 >gi|189501394|ref|YP_001960864.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides BS1] gi|189496835|gb|ACE05383.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides BS1] Length = 299 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 40/282 (14%), Positives = 86/282 (30%), Gaps = 51/282 (18%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 +T+ F A E Y A + ++++ KA Sbjct: 10 RMALITLVFLAAGTLFTACSSV--------KAPKSGEVSERYSYAQALIADEDYDKAVFE 61 Query: 80 FNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + L A Y++ +Y A + + + Q P S + + + Sbjct: 62 LESLMFDTRA--TALEDDVLFSLAEAYYNSKQYLLAVDIYKRLLEQTPGSPYAEDAQFKL 119 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT--------------------------- 170 S+ ++ D T+ ++ +E Y Sbjct: 120 AQSHKKLSPVSTRDHEHTRKAIREFQLYLELYPVRDPQQLKSDIDLYTELSRLNPENDSY 179 Query: 171 -------NSPYVK-----GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + Y + + +T+ R +LA E I +Y K +Y A+ + ++ Sbjct: 180 KRSLAAAEAQYARIDNVTESISSITLLREKLAEHEFSIAEHYRKLKKYRGALSYYDGIIR 239 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 Y D + E+A ++ V EA+ + +++P+ Sbjct: 240 FYPDTVYVEKAWYGKIDVLVKREKWFEAQAAIEAYDQQFPEN 281 >gi|288800000|ref|ZP_06405459.1| lipoprotein [Prevotella sp. oral taxon 299 str. F0039] gi|288333248|gb|EFC71727.1| lipoprotein [Prevotella sp. oral taxon 299 str. F0039] Length = 278 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 94/274 (34%), Gaps = 27/274 (9%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + +++C + ++ + TD Y+ YE A + + +A Sbjct: 1 MKNLSFIVIYIVSLCVFSSCANEFNQ---VYKTTDFNYK---YEYAKECFLNKKYQRASI 54 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 A++ L M QY +Y AA ++Y + YP+ + + +G Sbjct: 55 LLQDVVVQQKGTDNAQECLYMLGMAQYLNKEYDLAAQTFKKYYSSYPKGVYAEDAEFYIG 114 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 S + DQ T + ++ + ++ + K A+ + +++L KE+ + Sbjct: 115 QSLYMSTPEPRLDQTQTIAAISAFQDYLDLFPDAIHKKEAQQCLFALQDKLIKKELYSAQ 174 Query: 199 YYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYV-------- 238 Y G Y A I Q L +Y + E+ A+ + + Sbjct: 175 LYFDLGTYFGNCGPGENNYDACIITAQNALKDYPYSTKREDFALLIMKSKFELATQSIDE 234 Query: 239 -ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 L +A + YP E +K Sbjct: 235 KKLERYQDAEDECYGFINEYPDSKSRTLAEKYIK 268 >gi|327312371|ref|YP_004327808.1| outer membrane assembly lipoprotein YfiO [Prevotella denticola F0289] gi|326944525|gb|AEA20410.1| outer membrane assembly lipoprotein YfiO [Prevotella denticola F0289] Length = 290 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 52/286 (18%), Positives = 94/286 (32%), Gaps = 29/286 (10%) Query: 7 RAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66 R IC F + + K L I +C + + + T+ Y+ YE A Sbjct: 5 RIICNFAFQSQIMKKRIL-----IGICAALLCTSCAHEYNQVYKTTNNDYK---YEFAKE 56 Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 + + A A++ L M +Y YQ A+ ++Y YP Sbjct: 57 CFAKGKYGFAVPLLQDLVTVEKGTDNAQECLYMLGMAEYGLKDYQAASETFKKYYQTYPR 116 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + + + +G S + + DQ T + ++ Y N A+ + + Sbjct: 117 GQYAEMASFYIGQSLFEGTPEPRLDQTPTVAAIAAFQDYLDIYPNGKLKGTAQQRLFDLQ 176 Query: 187 NQLAAKEVEIGRYYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEE-AMARLV 234 ++L KE + Y G Y A I Q L +Y + E+ A+ + Sbjct: 177 DKLIRKEYLSAKLYYNLGSYFGNCTSGGNNYEACIITAQNALNDYPYSNMREDFAVLVMK 236 Query: 235 EAYVALALMDEAREVVSL---------IQERYPQGYWARYVETLVK 271 Y + EA+++ YP + E +K Sbjct: 237 SKYELAQMSVEAKKLQRFQDAEDECYGFINEYPDSKERKTAEEYIK 282 >gi|291515357|emb|CBK64567.1| DNA uptake lipoprotein [Alistipes shahii WAL 8301] Length = 249 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 92/225 (40%), Gaps = 10/225 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +Y KA+ + +++ + +A F + + +A +Y + A++L Sbjct: 10 PELIYSKALEYYQKEKWQRASTLFEGVQHYYTGSSREDSISFFNARCKYKNRDFDTASTL 69 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 +++ ++ S ++ + + + + DQ T L ++ + RY S V+ Sbjct: 70 LDDFRRKFGRSAFIEDAEGMYALCFYYLSPGPSRDQTMTGHALIAINEFMSRYPQSDRVE 129 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 R T +L K Y K G+Y +AI F+ L Y +++ EE M +V++ Sbjct: 130 NFRKINTELTERLHEKAYLNAYTYYKTGKYKSAIVAFKNALKQYPESKRREEIMYLIVDS 189 Query: 237 YVALALM----DEAREVVSLI------QERYPQGYWARYVETLVK 271 LA + +S++ +E +P+ + ++ + + Sbjct: 190 GYRLASNSISEKQTDRYLSMLDSYLSFKEEFPESTHIKSLDRMAQ 234 Score = 43.6 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 3/98 (3%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-IRDVPYDQ 152 K+ L A+ Y GKY+ A + + QYPESK + + YL+ S ++ + Q Sbjct: 144 EKAYLN-AYTYYKTGKYKSAIVAFKNALKQYPESKRREEIMYLIVDSGYRLASNSISEKQ 202 Query: 153 RATKLM-LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 L L E + S ++K R+ L Sbjct: 203 TDRYLSMLDSYLSFKEEFPESTHIKSLDRMAQQARDYL 240 >gi|194335029|ref|YP_002016889.1| TPR repeat-containing protein [Prosthecochloris aestuarii DSM 271] gi|194312847|gb|ACF47242.1| Tetratricopeptide TPR_2 repeat protein [Prosthecochloris aestuarii DSM 271] Length = 301 Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 79/247 (31%), Gaps = 54/247 (21%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-------SAFVQYSAGKYQQA 113 Y A ++++ + +A A ++ M A Y + +Y A Sbjct: 44 YSYARQLVEKEKYDRAIIELESLM-------FASRATTMEDDVLFSLADSYYQSEQYLLA 96 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + + + Q P S +++ S+ ++ D DQ T+ ++ ++ Y Sbjct: 97 IEIYKRLLEQTPGSLYAPEAQFMLAKSHMELSPDYARDQEHTRKAIREFQLYLDLYPQRQ 156 Query: 174 YVKG----------------------------------------ARFYVTVGRNQLAAKE 193 ++ + + R +LA Sbjct: 157 EASDLADDIEVLKGLIQLNPDNAAYRSKLALALSESERLGRIQESQKNIALLREKLAENT 216 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 I Y+K +Y AA ++ +L Y D + E+A + A + EAR + Sbjct: 217 FAIAERYVKLDQYRAAEVFYEDILRFYPDTPYFEKAWTGKIMALIKRGKWFEARAALEAY 276 Query: 254 QERYPQG 260 ++P+ Sbjct: 277 DRQFPEN 283 >gi|261880701|ref|ZP_06007128.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270332473|gb|EFA43259.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 277 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 93/268 (34%), Gaps = 26/268 (9%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + +++ L G + VY D RY+ YE A +++A + Sbjct: 4 LVLIALSTALLFGSCAKEFNQVY--KSPDYRYK---YEYAKECFANGKYTRAATLLQELI 58 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A++SL M A ++ Y+ AA ++Y+ YP + Y VG S Sbjct: 59 IQQKGTTEAQESLYMLAMSEFCNRNYETAAETFKQYVKSYPRGLYSEMASYYVGESLYMS 118 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + DQ +T + ++ Y + A+ + +++L KE+ + Y G Sbjct: 119 TPEPRLDQSSTVQAISSYQEYLDLYPGAKLKDQAQQRLFELQDKLVEKELYSAQLYYDLG 178 Query: 205 E-----------YVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYV---------ALALM 243 Y A I Q L +Y + E+ A+ + Y + Sbjct: 179 AYFGNCSSGGNNYEACIVTAQNALKDYPYSSRREDFAVLIMKSKYELAQQSVESKKIERY 238 Query: 244 DEAREVVSLIQERYPQGYWARYVETLVK 271 +A + YP + E+ +K Sbjct: 239 QDAEDECYGFINEYPDSKERKNAESYIK 266 >gi|332664680|ref|YP_004447468.1| outer membrane assembly lipoprotein YfiO [Haliscomenobacter hydrossis DSM 1100] gi|332333494|gb|AEE50595.1| outer membrane assembly lipoprotein YfiO [Haliscomenobacter hydrossis DSM 1100] Length = 284 Score = 100 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 90/246 (36%), Gaps = 10/246 (4%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 T V L+ + + + + + +Y KA+ + + + + K+ Sbjct: 5 TTILPFLVLSLMSFLLLNGCKSEFEQIRTSGDVKNIYAKALEYYQAEEWQKSQTLLEMII 64 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + A A+ Y+ Y A+ + + Y S + ++ + Q Sbjct: 65 PNVRGTKEAEDVFFKYAYTFYNLQSYTSASYHFKTFANTYGASPLREESEFMSAYAQYQE 124 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 DQ T ++ V Y +S V + R++L K E G+ Y Sbjct: 125 SPTFRLDQGNTGQAIEEFEFFVNSYPDSKRVAECNKLIDQLRSKLETKAFEEGKLYFNLR 184 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEAREVVSLIQ 254 Y +A+ F+ +L ++ + ++AEE ++ +Y LA+ E R + + Sbjct: 185 YYQSAVSSFENLLKDFPETKNAEEVRLMILRSYYDLAVNSILDKREERFKECRRLAAEFL 244 Query: 255 ERYPQG 260 ERYP+ Sbjct: 245 ERYPKS 250 >gi|258647913|ref|ZP_05735382.1| putative lipoprotein [Prevotella tannerae ATCC 51259] gi|260851749|gb|EEX71618.1| putative lipoprotein [Prevotella tannerae ATCC 51259] Length = 280 Score = 99.8 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 97/271 (35%), Gaps = 27/271 (9%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + F LTI + CFL + +D D Y+ YE A + + ++++ + Sbjct: 1 MRNFILTI--AALGCFLFASCGDYDK---VDKTPDYTYK---YEAAKQYFAQGYYNRSAQ 52 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 Q F +SL + +A Y AA+ Y YP+ + Y G Sbjct: 53 TLQQVISVFKGTEAGEESLFLLGMANLNARNYDAAATYLRRYYQSYPKGLYTEAARYYTG 112 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 M+ + DQ AT + +E + S + A+ + +++L KE + Sbjct: 113 MALYLSTPEPKLDQSATYEAVTEFQNFIETFPTSIFRSQAQDRIFELQDKLVEKEYLSAK 172 Query: 199 YYLK---------RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL------- 242 Y G Y A I + + ++ + E+ +++A A Sbjct: 173 LYYDLGDYFLNGGNGNYQACIVTSENAIKDFPYTKRREDFAYLILKAKYEYAKHSVPEKQ 232 Query: 243 ---MDEAREVVSLIQERYPQGYWARYVETLV 270 ++A + Q +P+ + + + ++ Sbjct: 233 TERYNDAVDEYYGFQSEFPESKYMKEAKDMI 263 >gi|53713909|ref|YP_099901.1| hypothetical protein BF2617 [Bacteroides fragilis YCH46] gi|60682118|ref|YP_212262.1| lipoprotein [Bacteroides fragilis NCTC 9343] gi|253567098|ref|ZP_04844549.1| lipoprotein [Bacteroides sp. 3_2_5] gi|265764255|ref|ZP_06092823.1| lipoprotein [Bacteroides sp. 2_1_16] gi|52216774|dbj|BAD49367.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|60493552|emb|CAH08339.1| conserved hypothetical lipoprotein [Bacteroides fragilis NCTC 9343] gi|251944222|gb|EES84731.1| lipoprotein [Bacteroides sp. 3_2_5] gi|263256863|gb|EEZ28209.1| lipoprotein [Bacteroides sp. 2_1_16] gi|301163588|emb|CBW23139.1| conserved hypothetical lipoprotein [Bacteroides fragilis 638R] Length = 267 Score = 99.4 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 97/262 (37%), Gaps = 22/262 (8%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 I +A L + L TD Y+ YE A + + ++++ N+ Sbjct: 5 IIITLLAATVLSSCGEYNK----LLKSTDYEYK---YEAAKNYFAKGQYNRSATLLNELI 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A +SL M A Y+ Y AA Y YP + + + G + Sbjct: 58 TILKGGDKAEESLYMLAMSYYNQKDYSTAAQSFITYFNTYPRGQFSELARFHAGKALFLD 117 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + DQ +T +Q + +E Y S + A+ + +++L KE+ R Y G Sbjct: 118 TPEPRLDQSSTYQAIQQLQMFLEYYPQSSRKQEAQNMIFALQDKLVLKELYSARLYYNLG 177 Query: 205 -----EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM-------DEAREVVS- 251 Y++ + Q L +Y ++ E+ ++ A +A+ D RE V Sbjct: 178 NYMGNNYLSCVITAQNALKDYPYTDYREDLSILILRAKYEMAVNSVEDKKMDRYRETVDE 237 Query: 252 --LIQERYPQGYWARYVETLVK 271 + +P+ + + E + K Sbjct: 238 YYAFKNEFPESKYLKEAERIFK 259 >gi|254446643|ref|ZP_05060119.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] gi|198260951|gb|EDY85259.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] Length = 369 Score = 99.4 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 13/190 (6%) Query: 59 EVYEKAVLFLKE------------QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 E+Y+ AV L+ +N +A +YF + P++ A SL+ A Sbjct: 142 EMYKIAVARLETHRDKILFVIPGFKNTDRAVQYFERIVAIAPYSDYAPLSLMNVAKAWSD 201 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 + +T YP S Y + ++ +I+ YDQRAT+ + + + Sbjct: 202 KNSDSMTIYALDRLVTNYPNSFLTSDAYLKLAQTHYGLIKGPEYDQRATEDAITFFEDFL 261 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR-YYLKRGEYVAAIPRFQLVLANYSDAEH 225 +Y + +V A ++ +N L+ +V++ YY KR +Y AA + + + Sbjct: 262 IQYPENLHVDQAETGLSGAKNILSMSKVKMADFYYYKRSKYDAAKILYNEAITIAPRSTA 321 Query: 226 AEEAMARLVE 235 AE A RL + Sbjct: 322 AELARTRLEK 331 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 30/254 (11%), Positives = 80/254 (31%), Gaps = 57/254 (22%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV--------------YEKA 64 + + + IA+ LV +S+ + + ++ A Sbjct: 11 VTRALIFATLGIALAALVPSGWAASKISWSAETGYTSEEVDLSGLLPEEQQRILNWMNSA 70 Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE-YITQ 123 ++ ++ +A + + + S+ +P + + + + Q A + ++ + Sbjct: 71 RKAEEKGSYKRALKLYKKVSKRYPKNQYSPE-------AYFRTAQIQLARNSVDKAFEAF 123 Query: 124 YPESKNVDYVY-------------YLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIV 166 + +VY Y + ++ + RD + T +QY RIV Sbjct: 124 N----TIAWVYPNYGSFNETLGEMYKIAVARLETHRDKILFVIPGFKNTDRAVQYFERIV 179 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 S Y + + + + + + I ++ NY ++ Sbjct: 180 AIAPYSDYAPLSL--------------MNVAKAWSDKNSDSMTIYALDRLVTNYPNSFLT 225 Query: 227 EEAMARLVEAYVAL 240 +A +L + + L Sbjct: 226 SDAYLKLAQTHYGL 239 >gi|34540927|ref|NP_905406.1| lipoprotein protein [Porphyromonas gingivalis W83] gi|34397242|gb|AAQ66305.1| lipoprotein protein, putative [Porphyromonas gingivalis W83] Length = 270 Score = 99.4 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 83/225 (36%), Gaps = 17/225 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A F E+ +SKA + + + + A + A +EY Sbjct: 35 YSYAKKFYNERKYSKAASLLEDVRGIYDGTSEGEQLMFLLAECYLEMRRDADAGICYQEY 94 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +YP+ + Y G + + D DQ T L +Q + ++ + N Y K A Sbjct: 95 YNKYPKGLRAEEARYKAGYCFYEASPDSRLDQSDTYLAIQELQSYLDFFPNGKYAKEAEN 154 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR-----FQLVLANYSDAEHAEEAMARLVE 235 + +++LA KE + Y G Y+ R + L Y +H EE + +++ Sbjct: 155 MLFGLQDKLAYKEYRTAKLYYNLGLYLGNNYRSCIVTAEAALKTYPYTKHREELVFLMLQ 214 Query: 236 A-----------YVALALMDEAREVVSLIQERYPQGYWARYVETL 269 A + D A + + I E +P G + + + + Sbjct: 215 AMYEEASFSVSEKLQTRYRDVADQYFAYINE-FPNGKYLKQAKKI 258 >gi|225850549|ref|YP_002730783.1| hypothetical protein PERMA_0997 [Persephonella marina EX-H1] gi|225646376|gb|ACO04562.1| conserved hypothetical protein [Persephonella marina EX-H1] Length = 300 Score = 99.0 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 6/164 (3%) Query: 63 KAVLFLKEQNFSKAYEYFNQ----CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 K + K+ ++ +A + + A K+ A Y +Y A E Sbjct: 29 KGIQLYKKGDYEEAKDLLKKSIYKVKGL--TADELMKARFYLADSYYREEQYVDAIVEFE 86 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 E IT +P + +D Y + SY ++ V D + L+ ++E Y +S Y A Sbjct: 87 ELITLFPTAPFMDEALYKLADSYLKISPGVDRDMSYPEKALEKAEELIENYPDSKYAAKA 146 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + + A +EI + Y K G+Y +A +QL Y D Sbjct: 147 KKIIHTVNKMKADHILEIAQLYEKLGKYYSASRYYQLAYDQYED 190 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 15/120 (12%) Query: 166 VERYTNSPY--VKGARFYVTVGRNQLAAKEVEIGRYY-----LKRGEYVAAIPRFQLVLA 218 ++ Y Y K L A E+ R+Y + +YV AI F+ ++ Sbjct: 31 IQLYKKGDYEEAKDLLKKSIYKVKGLTADELMKARFYLADSYYREEQYVDAIVEFEELIT 90 Query: 219 NYSDAEHAEEAMARLVEAYVA--------LALMDEAREVVSLIQERYPQGYWARYVETLV 270 + A +EA+ +L ++Y+ ++ ++A E + E YP +A + ++ Sbjct: 91 LFPTAPFMDEALYKLADSYLKISPGVDRDMSYPEKALEKAEELIENYPDSKYAAKAKKII 150 >gi|294674052|ref|YP_003574668.1| lipoprotein [Prevotella ruminicola 23] gi|294471674|gb|ADE81063.1| putative lipoprotein [Prevotella ruminicola 23] Length = 275 Score = 99.0 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 76/228 (33%), Gaps = 18/228 (7%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 I + A L + + VY TD + YE A F +A + Sbjct: 5 IITLACAALLLSSCASEFNS-VYKYGDTDYK-----YEYAKEAFACGKFQQATSLLEELV 58 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + A++ L M QY Y A+ ++Y T YP + Y+ VG S Q Sbjct: 59 TIKKGSDEAQECLYMLGMAQYGNLDYDAASETFKKYTTSYPRGTYAELAYFYVGQSLYQS 118 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + DQ T + + ++ Y S A+ + +L KE Y G Sbjct: 119 APEPRLDQSPTNGAITAYQQFMDLYPESSLRPQAQSRLYELHEKLIQKEYLSAELYYNLG 178 Query: 205 ------------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 Y A I Q L NY E+ M +++A L Sbjct: 179 GYFGNINSNEESNYNACIITAQNCLKNYPYCSIREDLMLLIMKAKFEL 226 >gi|237755666|ref|ZP_04584277.1| lipoprotein [Sulfurihydrogenibium yellowstonense SS-5] gi|237692178|gb|EEP61175.1| lipoprotein [Sulfurihydrogenibium yellowstonense SS-5] Length = 311 Score = 99.0 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 66/200 (33%), Gaps = 11/200 (5%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN--Q 82 + F I+ + D + +E K + K+ + KA E Sbjct: 4 FVVFLISGFVIASCA---------DKGQKLYEGQEKLSKGLELYKKGEYKKAREELKNAI 54 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 ++ A Y+ +Y A EE+I +P S V Y + MSY Sbjct: 55 FKSQGLTPDQIMEARFALADSYYNREEYIDAIVEFEEFIALFPTSPKVPEALYKLAMSYL 114 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + D D + I+ Y NS YVK + + A + I Y K Sbjct: 115 FVSPDYKRDMTYVNKAQEKAEEIISSYPNSKYVKATKEILKKVNEIKAKHTLYIAETYEK 174 Query: 203 RGEYVAAIPRFQLVLANYSD 222 G+ +A ++ NY D Sbjct: 175 YGKPYSASVYYREAYTNYKD 194 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 8/93 (8%) Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV-------- 238 +Q+ + Y R EY+ AI F+ +A + + EA+ +L +Y+ Sbjct: 63 DQIMEARFALADSYYNREEYIDAIVEFEEFIALFPTSPKVPEALYKLAMSYLFVSPDYKR 122 Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + +++A+E I YP + + + ++K Sbjct: 123 DMTYVNKAQEKAEEIISSYPNSKYVKATKEILK 155 >gi|149372318|ref|ZP_01891506.1| TPR repeat protein [unidentified eubacterium SCB49] gi|149354708|gb|EDM43271.1| TPR repeat protein [unidentified eubacterium SCB49] Length = 266 Score = 98.7 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 85/218 (38%), Gaps = 6/218 (2%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 IF + + + + + DS Y A + K+ + Q Sbjct: 4 IFLIVVLSITFASCSEYQKVLAGDSTAKK------YAMADSLYTAGKYLKSVKLMEQIIP 57 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 + +K + + A Y+ G Y + E + YP+S +V + SY ++ Sbjct: 58 AYRGKPQGQKLMFLYANAYYNLGDYTLSGYQFERFTISYPKSDSVVVAAFRGAKSYYELS 117 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 DQ T L+ + + Y ++ A V+ R++L K EI YL+ + Sbjct: 118 PVYSLDQADTNKALEKLQGFINNYPDADQRVEANEMVSDLRSKLDYKAFEIAEQYLRISD 177 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 Y AAI + +AN+ +E+ ++A ++A LA+ Sbjct: 178 YKAAISAYDNFIANHPGSEYRKDAFYGRLKASYELAIN 215 >gi|315023899|gb|EFT36901.1| lipoprotein protein, putative [Riemerella anatipestifer RA-YM] Length = 270 Score = 98.7 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 83/223 (37%), Gaps = 14/223 (6%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + A ++ + +A + + A L SA+ Y +Y+ A +++ Sbjct: 11 KTANEMYTKKKWKEALSLYERVQNLISGTDEASDILFKSAYANYYDKQYRIAGHQFKKF- 69 Query: 122 TQYP---ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + Y+ + Y Q D DQ+ T+L + + + Y NS K Sbjct: 70 SVNSALATDPRKEEAAYMSAICYYQGSMDYNLDQKDTELAINELQSFLNNYPNSERAKNI 129 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + +L K E R Y K E +AI F+ VL ++ + + L++A Sbjct: 130 NELIDELSYKLEFKAYENARQYYKMLELKSAIISFENVLDDFPSTKLRPKIETMLMDAKA 189 Query: 239 ALALM----------DEAREVVSLIQERYPQGYWARYVETLVK 271 LA+ + A L+++ YP A+ TL K Sbjct: 190 KLAIDSKFELKRERLEHAVAYTHLMEKNYPDTDIAKTAVTLRK 232 >gi|281422446|ref|ZP_06253445.1| putative lipoprotein [Prevotella copri DSM 18205] gi|281403509|gb|EFB34189.1| putative lipoprotein [Prevotella copri DSM 18205] Length = 291 Score = 98.3 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 86/259 (33%), Gaps = 27/259 (10%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LT+ S L + ++ + T YE A + +S+A + Sbjct: 7 LTLIASCVALLLSSCAHEYNQVLKSGDYTYK------YEYAKQSYAQGKYSRAIPLLQEL 60 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + + L M A +Y Y+ AA ++Y + YP+ K + Y VG S Q Sbjct: 61 VTMKKGSTEGEECLYMLAMAEYGMKDYETAAEYFKKYYSSYPKGKFAENAKYFVGESLYQ 120 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 + DQ T + ++ Y ++ + A + ++ L KE + + Y Sbjct: 121 NAPEPRLDQSTTITAIAAFQEFLDLYPDARLKQQATNRLFALQDLLVEKEYKSAKLYFDM 180 Query: 204 G-----------EYVAAIPRFQLVLANYSDAEHAEE----------AMARLVEAYVALAL 242 G Y A I Q L +Y + EE +A++ L Sbjct: 181 GTYFGNCTSGGNNYEACIVTAQNALKDYPYSNRREEFASLIMKGKYELAKMSVEKKQLER 240 Query: 243 MDEAREVVSLIQERYPQGY 261 +A + YP Sbjct: 241 YQDAEDECYGFINEYPDSK 259 >gi|313206826|ref|YP_004046003.1| outer membrane assembly lipoprotein yfio [Riemerella anatipestifer DSM 15868] gi|312446142|gb|ADQ82497.1| outer membrane assembly lipoprotein YfiO [Riemerella anatipestifer DSM 15868] gi|325335735|gb|ADZ12009.1| YfiO [Riemerella anatipestifer RA-GD] Length = 294 Score = 98.3 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 47/242 (19%), Positives = 88/242 (36%), Gaps = 14/242 (5%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S + D + + + A ++ + +A + + A L SA+ Sbjct: 16 SCNRQYDLAMKSADKDLILKTANEMYTKKKWKEALSLYERVQNLISGTDEASDILFKSAY 75 Query: 103 VQYSAGKYQQAASLGEEYITQYP---ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y +Y+ A +++ + + Y+ + Y Q D DQ+ T+L + Sbjct: 76 ANYYDKQYRIAGHQFKKF-SVNSALATDPRKEEAAYMSAICYYQGSMDYNLDQKDTELAI 134 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 + + Y NS K + +L K E R Y K E +AI F+ VL + Sbjct: 135 NELQSFLNNYPNSERAKNINELIDELSYKLEFKAYENARQYYKMLELKSAIISFENVLDD 194 Query: 220 YSDAEHAEEAMARLVEAYVALALM----------DEAREVVSLIQERYPQGYWARYVETL 269 + + + L++A LA+ + A L+++ YP A+ TL Sbjct: 195 FPSTKLRPKIETMLMDAKAKLAIDSKFELKRERLEHAVAYTHLMEKNYPDTDIAKTAVTL 254 Query: 270 VK 271 K Sbjct: 255 RK 256 >gi|255009577|ref|ZP_05281703.1| lipoprotein [Bacteroides fragilis 3_1_12] gi|313147354|ref|ZP_07809547.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313136121|gb|EFR53481.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 267 Score = 98.3 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 97/262 (37%), Gaps = 22/262 (8%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 I +A L + L TD Y+ YE A + + ++++ N+ Sbjct: 5 IIITLLAATVLSSCGEYNK----LLKSTDYEYK---YEAAKNYFAKGQYNRSATLLNELI 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A +SL M A Y+ Y AA Y YP + + + G + Sbjct: 58 TILKGTDKAEESLYMLAMSYYNQKDYSTAAQSFITYFNTYPRGQFSELARFHAGKALYLD 117 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + DQ +T +Q + +E Y S + A+ + +++L KE+ R Y G Sbjct: 118 TPEPRLDQSSTYQAIQQLQMFLEYYPQSSRKQEAQNMIFALQDKLVLKELLSARLYYNLG 177 Query: 205 EYV-----AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM-------DEAREVVS- 251 Y+ + + Q L +Y ++ EE ++ A +A+ D RE V Sbjct: 178 NYLGNNFMSCVITAQNALKDYPYTDYREELSILILRAKYEMAVNSVEDKKMDRYRETVDE 237 Query: 252 --LIQERYPQGYWARYVETLVK 271 + +P+ + + E + K Sbjct: 238 YYAFKNEFPESKYLKEAEKIFK 259 >gi|218130941|ref|ZP_03459745.1| hypothetical protein BACEGG_02543 [Bacteroides eggerthii DSM 20697] gi|317476252|ref|ZP_07935503.1| outer membrane assembly lipoprotein YfiO [Bacteroides eggerthii 1_2_48FAA] gi|217987285|gb|EEC53616.1| hypothetical protein BACEGG_02543 [Bacteroides eggerthii DSM 20697] gi|316907663|gb|EFV29366.1| outer membrane assembly lipoprotein YfiO [Bacteroides eggerthii 1_2_48FAA] Length = 267 Score = 98.3 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 82/226 (36%), Gaps = 15/226 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A + + +++A N+ A +SL M Y+ YQ AA +Y Sbjct: 34 YEAAKNYFAKGQYNRAATLLNELIAILKGTDKAEESLYMLGMSYYNQNDYQTAAQTFTQY 93 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP + + G + + DQ T +Q + +E + NS A+ Sbjct: 94 YNVYPRGTFTELARFHAGKALYLDTPEPRLDQSGTYNAIQQLQMFLEYFPNSAKKDEAQN 153 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVE 235 + +++L KE + Y G Y+ + + Q L +Y E+ ++ Sbjct: 154 MIFALQDKLVMKEYLSAKLYYNLGNYLGNNYESCVITAQNALKDYPYTNMREDLSILILR 213 Query: 236 AYVALAL----------MDEAREVVSLIQERYPQGYWARYVETLVK 271 A +A+ EA + + +P+ + + + + K Sbjct: 214 AKYEMAVFSVEDKREERYREAVDEYYAFKNEFPESKYMKDADRIFK 259 >gi|260592313|ref|ZP_05857771.1| putative lipoprotein [Prevotella veroralis F0319] gi|260535763|gb|EEX18380.1| putative lipoprotein [Prevotella veroralis F0319] Length = 274 Score = 97.9 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 84/266 (31%), Gaps = 24/266 (9%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 F I +C + + + TD Y+ YE A + + A Sbjct: 4 SFLIGICVALLLTSCAHEYNQVYKTTDNNYK---YEFAKECFAKGKYGFAVPLLQDLVTI 60 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 A + L M A +Y Y+ A+ ++Y YP + + + +G S + Sbjct: 61 EKGTDNAEECLYMLAMGEYGLKDYEAASETFKKYYQTYPRGRYAEMASFYIGQSLFEGTP 120 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG-- 204 + DQ T + ++ + A+ + +++L KE + Y G Sbjct: 121 EARLDQTPTIAAIAAFQDYLDIFPEGKMKSTAQQRLFDLQDKLIRKEYLNAKLYYNLGSY 180 Query: 205 ---------EYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYV---------ALALMDE 245 Y A I Q L +Y + E+ ++ + Y L + Sbjct: 181 FGNCTSGGNNYEACIITAQNALNDYPYSNLREDFSILIMKSKYELAQMSVESKKLQRYQD 240 Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271 A + YP + E +K Sbjct: 241 AEDECYGFINEYPNSKERKTAEDFIK 266 >gi|298208455|ref|YP_003716634.1| lipoprotein protein, putative [Croceibacter atlanticus HTCC2559] gi|83848378|gb|EAP86247.1| lipoprotein protein, putative [Croceibacter atlanticus HTCC2559] Length = 277 Score = 97.9 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 71/219 (32%), Gaps = 2/219 (0%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK--EQNFSKAYEYFNQCS 84 F + + D YE+A K + + KA + F Q Sbjct: 11 FTLLTIILFSSCSEYQKALKNDDIAKKYELGISYYEQAQDGAKRPKAKYRKAIKLFEQIL 70 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + K + A Y Y + E + YP+S V+ + SY + Sbjct: 71 PQYRGKPQGEKLAFVYANSYYELEDYFLSGYQFERFTKAYPDSDRVEEAAFKSARSYYEG 130 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 DQ T L + Y +++ A T +L K EI + Y Sbjct: 131 SPRYSLDQADTDKALDKLQLYFVTYPEGQFIEEANVMATELGQKLEKKAYEIAKQYHHTE 190 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 Y AI F L +Y + + E+A+ E+ LA+ Sbjct: 191 NYKPAIEAFDNYLVDYPGSSYREKAIYYKFESAYLLAIN 229 >gi|300727771|ref|ZP_07061154.1| outer membrane assembly lipoprotein YfiO [Prevotella bryantii B14] gi|299774966|gb|EFI71575.1| outer membrane assembly lipoprotein YfiO [Prevotella bryantii B14] Length = 281 Score = 97.9 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 46/229 (20%), Positives = 81/229 (35%), Gaps = 21/229 (9%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A +SKA + A++SL M A +Y Y+ A+ ++Y Sbjct: 35 YEYAKEMFANGKYSKAVALLQELVTLEKGTENAQESLYMLAMSEYCLKDYETASEYFKKY 94 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + YP + Y VG S + DQ T + ++ Y + A+ Sbjct: 95 FSSYPHGTYSEMAEYYVGQSLFMSTPEPRLDQSGTIAAISAFQEYLDVYPDGKMKPTAQK 154 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEEA 229 + +++L KE+ R Y G Y A + Q L +Y +++ EE Sbjct: 155 RLFELQDKLVLKELYNARLYYNLGSYFGNCTNGGNNYEACVITSQNALKDYPYSDNREEF 214 Query: 230 MARLVEAYVALALM----------DEAREVVSLIQERYPQGYWARYVET 268 ++++ LA M +A + YP + E+ Sbjct: 215 ATLIMKSKFELAKMSVDERKYERFQDAEDECYGFINEYPDSKERKTAES 263 >gi|270297061|ref|ZP_06203260.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273048|gb|EFA18911.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 272 Score = 97.5 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 82/226 (36%), Gaps = 15/226 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A + + +++A N+ A +SL M Y+ YQ AA +Y Sbjct: 34 YEAAKNYFAKGQYNRAATLLNELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFIQY 93 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP + + G + + DQ T +Q + +E + S + A+ Sbjct: 94 YNVYPRGTFTELARFHAGKALYLDTPEPRLDQSGTYSAIQQLQMFMEYFPQSSKKEEAQN 153 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVE 235 + +++L KE + Y G Y+ A + Q L +Y E+ ++ Sbjct: 154 MIFALQDKLVMKEYLSAKLYYNMGNYLGNNYQACVITAQNALKDYPYTNLREDLSILILR 213 Query: 236 AYVALAL----MDEAREVVSLIQERY------PQGYWARYVETLVK 271 A LA+ A + E Y P+ + + V+ + K Sbjct: 214 AKYELAVYSVEDKRAERYREAVDECYAFKNEFPESKYMKEVDRIFK 259 >gi|21672858|ref|NP_660923.1| hypothetical protein CT0017 [Chlorobium tepidum TLS] gi|21645907|gb|AAM71265.1| hypothetical protein CT0017 [Chlorobium tepidum TLS] Length = 382 Score = 97.5 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 89/279 (31%), Gaps = 48/279 (17%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQC 83 ++ + + S T E+ Y +A + ++ ++ A Sbjct: 82 SVLRILPGLLCLALPLSSCSSSKSPKATMTATPVELRYREATEKIAKRKYNDAIVILESL 141 Query: 84 SRDFPFAGVAR----KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F+ A L A Y +Y AA + Q P+S +++ Sbjct: 142 M----FSTRATALEDDVLKALADSYYKKKEYILAADTYRRLLQQTPDSPYARDAQFMLAK 197 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYT-----------------------NSPY-- 174 SY ++ DQ T + +++Y N+ Y Sbjct: 198 SYEKLSPFHELDQEYTVKAINEFETYLDQYPSDDSAQAANDLELYKNLMKVNPDNASYRE 257 Query: 175 --------------VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 + ++ ++ R +LA I R Y K +Y AA + +V+ Y Sbjct: 258 KYEAAKEELASGSPARYSQKAISELRERLAHNRFSIARQYFKLKKYRAAEIFYDVVINQY 317 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 D + E A +++ + EAR+ + Q+ YP Sbjct: 318 PDTKWLESAWIGKIDSEIKQNNWFEARQSIETFQQLYPD 356 >gi|167762889|ref|ZP_02435016.1| hypothetical protein BACSTE_01253 [Bacteroides stercoris ATCC 43183] gi|167699229|gb|EDS15808.1| hypothetical protein BACSTE_01253 [Bacteroides stercoris ATCC 43183] Length = 267 Score = 97.5 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 82/226 (36%), Gaps = 15/226 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A + + +S+A N+ A +SL M Y+ YQ AA +Y Sbjct: 34 YEAAKNYFAKGQYSRAATLLNELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFTQY 93 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP + + G + + DQ T +Q + +E + +S A+ Sbjct: 94 YNVYPRGTFTELARFHAGKALFLDTPEPRLDQSGTYSAIQQLQMFLEYFPDSSKKDEAQS 153 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVE 235 + +++L KE + Y G Y+ + + Q L +Y E+ ++ Sbjct: 154 MIFALQDKLVMKEYLSAKLYYNLGNYLGNNYESCVITAQNALKDYPYTNMREDLSILILR 213 Query: 236 AYVALALMD----------EAREVVSLIQERYPQGYWARYVETLVK 271 A +A+ EA + + +P+ + + + + K Sbjct: 214 AKYEMAVYSVEDKRAERYREAVDEYYAFKNEFPESKYMKDADRIFK 259 >gi|160888159|ref|ZP_02069162.1| hypothetical protein BACUNI_00567 [Bacteroides uniformis ATCC 8492] gi|317478939|ref|ZP_07938086.1| outer membrane assembly lipoprotein YfiO [Bacteroides sp. 4_1_36] gi|156862294|gb|EDO55725.1| hypothetical protein BACUNI_00567 [Bacteroides uniformis ATCC 8492] gi|316904916|gb|EFV26723.1| outer membrane assembly lipoprotein YfiO [Bacteroides sp. 4_1_36] Length = 272 Score = 97.1 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 44/226 (19%), Positives = 83/226 (36%), Gaps = 15/226 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A + + +++A N+ A +SL M Y+ YQ AA +Y Sbjct: 34 YEAAKNYFAKGQYNRAATLLNELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFIQY 93 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP + + G + + DQ T +Q + +E + S + A+ Sbjct: 94 YNVYPRGTFTELARFHAGKALYLDTPEPRLDQSGTYSAIQQLQMFMEYFPQSSKKEEAQN 153 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVE 235 + +++L KE + Y G Y+ A + Q L +Y E+ ++ Sbjct: 154 MIFALQDKLVMKEYLSAKLYYNMGNYLGNNYQACVITAQNALKDYPYTNLREDLSILILR 213 Query: 236 AYVALALMD----------EAREVVSLIQERYPQGYWARYVETLVK 271 A LA+ EA + + +P+ + + V+ + K Sbjct: 214 AKYELAVYSVEDRRAERYREAVDECYAFKNEFPESKYMKEVDRIFK 259 >gi|229495750|ref|ZP_04389478.1| putative lipoprotein protein [Porphyromonas endodontalis ATCC 35406] gi|229317324|gb|EEN83229.1| putative lipoprotein protein [Porphyromonas endodontalis ATCC 35406] Length = 276 Score = 97.1 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 96/269 (35%), Gaps = 22/269 (8%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 ++ K +T F + + + D+ Y+ A + ++ +SKA Sbjct: 5 KIVKLLVTGFLMLFSLLISSCGEMARIQKSNDTSLK-------YDYAKKYFNQKKWSKAS 57 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E + ++L M + + AA Y T YP+ + + Sbjct: 58 ELLVDVVPAYEGTSEGAQALYMLGISELALEHGDIAAESFRRYYTNYPKGAKAEESRFRA 117 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 G ++ + DQ T +Q + +E Y S Y K A + +++LA KE++ Sbjct: 118 GEAFYISSPEAQLDQNVTYTAIQELQTFIELYPTSDYRKDAERMLFDLQDKLAYKELKSA 177 Query: 198 RYYLKRG-----EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----DEARE 248 Y G Y +A+ L +Y ++ E+ ++ A A+ + Sbjct: 178 TLYYDMGMYLGNNYQSAVVTANNALKDYPYSKWREDFYILILRATYQEAINSVVSKQQER 237 Query: 249 VVSLIQE------RYPQGYWARYVETLVK 271 ++I +PQG + + + + K Sbjct: 238 YRNVIDRYFAYVNEFPQGKYTKEADRIYK 266 >gi|329955048|ref|ZP_08296029.1| outer membrane assembly lipoprotein YfiO [Bacteroides clarus YIT 12056] gi|328526338|gb|EGF53353.1| outer membrane assembly lipoprotein YfiO [Bacteroides clarus YIT 12056] Length = 267 Score = 96.7 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 81/226 (35%), Gaps = 15/226 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A + + +++A N+ A +SL M Y+ YQ AA +Y Sbjct: 34 YEAAKNYFAKGQYNRAATLLNELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFTQY 93 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP + + G + + DQ T +Q + +E + NS A+ Sbjct: 94 YNVYPRGTFTELARFHAGKALYLDTPEPRLDQSGTYSAIQQLQMFLEYFPNSAKKDEAQS 153 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVE 235 + +++L KE + Y G Y+ + + Q L +Y E+ ++ Sbjct: 154 MIFTLQDKLVMKEYLSAKLYYNLGNYLGNNYESCVITAQNALKDYPYTNMREDLSILILR 213 Query: 236 AYVALAL----MDEAREVVSLIQE------RYPQGYWARYVETLVK 271 A +A+ A + E +P+ + + + + K Sbjct: 214 AKYEMAVYSVEDKRAERYRETVDEYYAFKNEFPESKYMKDADRIFK 259 >gi|329964889|ref|ZP_08301897.1| outer membrane assembly lipoprotein YfiO [Bacteroides fluxus YIT 12057] gi|328524530|gb|EGF51598.1| outer membrane assembly lipoprotein YfiO [Bacteroides fluxus YIT 12057] Length = 267 Score = 96.3 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 44/226 (19%), Positives = 83/226 (36%), Gaps = 15/226 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A + + +++A N+ A +SL M Y+ YQ AA +Y Sbjct: 34 YEAAKTYFAKGQYNRAATLLNELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFIQY 93 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP + + G + + DQ T +Q + +E + S + A+ Sbjct: 94 YNVYPRGTFTELARFHAGKALYLDTPEPRLDQSGTYSAIQQLQMFMEYFPQSAKKEEAQN 153 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVE 235 + +++L KE + Y G Y+ A + Q L +Y E+ ++ Sbjct: 154 MIFALQDKLVMKEYLSAKLYYNLGNYLGNNYQACVITAQNALKDYPYTNLREDLSILVLR 213 Query: 236 AYVALALMD----------EAREVVSLIQERYPQGYWARYVETLVK 271 A LA+ EA + + +P+ +++ E + K Sbjct: 214 AKYELAVYSVEEKKPERYREAVDEYYAFKNEFPESKYSKEAERIFK 259 >gi|29345983|ref|NP_809486.1| hypothetical protein BT_0573 [Bacteroides thetaiotaomicron VPI-5482] gi|253568616|ref|ZP_04846027.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|298387378|ref|ZP_06996931.1| hypothetical protein HMPREF9007_04151 [Bacteroides sp. 1_1_14] gi|29337877|gb|AAO75680.1| lipoprotein protein, putative [Bacteroides thetaiotaomicron VPI-5482] gi|251842689|gb|EES70769.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|298260047|gb|EFI02918.1| hypothetical protein HMPREF9007_04151 [Bacteroides sp. 1_1_14] Length = 267 Score = 96.3 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 94/260 (36%), Gaps = 22/260 (8%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 I +A L + L TD Y+ YE A + + ++++ N+ Sbjct: 5 IIITLLAAASLTSCGEYNK----LLKSTDYEYK---YEAAKNYFAKGQYNRSATLLNELI 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A +SL M Y+ YQ AA Y YP + + G S Sbjct: 58 TILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFITYFNTYPRGTFTELARFHAGKSLFLD 117 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + DQ +T +Q + +E + NS + A+ + +++L KE+ + Y G Sbjct: 118 TPEPRLDQSSTYQAIQQLQMFMEYFPNSTKKQEAQDMIFALQDKLVLKELYSAKLYYNLG 177 Query: 205 EYV-----AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----MDEAREVVSLIQE 255 Y+ + + Q L +Y ++ EE ++ A +A+ + I E Sbjct: 178 NYLGNNYESCVITAQNALKDYPYTDYREELSILILRARHEMAIYSVEDKKMDRYRETIDE 237 Query: 256 ------RYPQGYWARYVETL 269 +P+ + + E + Sbjct: 238 YYAFKNEFPESKYLKEAEKI 257 >gi|288803852|ref|ZP_06409278.1| lipoprotein [Prevotella melaninogenica D18] gi|288333686|gb|EFC72135.1| lipoprotein [Prevotella melaninogenica D18] Length = 274 Score = 96.0 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 91/265 (34%), Gaps = 24/265 (9%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 I +C ++ + + T+ Y+ YE A + + A Sbjct: 5 ILIGLCAVLLLTSCAHEYNQVYKTTNNDYK---YEFAKECFAKGKYGFAVPLLQDLVTIE 61 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 A++ L M A +YS YQ A+ ++Y YP + + + +G S + + Sbjct: 62 KGTDNAQECLYMLAMAEYSLKDYQAASETFKKYYQTYPRGQYAEMASFYIGQSLFEGTPE 121 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--- 204 DQ T + ++ + N + A+ + +++L KE + Y G Sbjct: 122 PRLDQTPTVAAIAAFQEYLDIFPNGKMKETAQQRLFSLQDKLVRKEYLNAKLYYNLGSYF 181 Query: 205 --------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEA 246 Y A I Q L +Y ++ E ++++ LA M +A Sbjct: 182 GNCTSGGNNYEACIITAQNALNDYPYSDLRENFAILIMKSKFELAQMSVEEKKVQRFQDA 241 Query: 247 REVVSLIQERYPQGYWARYVETLVK 271 + YP+ + E +K Sbjct: 242 EDECYGFINEYPESKERKTAEDYIK 266 >gi|153806675|ref|ZP_01959343.1| hypothetical protein BACCAC_00945 [Bacteroides caccae ATCC 43185] gi|149131352|gb|EDM22558.1| hypothetical protein BACCAC_00945 [Bacteroides caccae ATCC 43185] Length = 267 Score = 96.0 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 95/260 (36%), Gaps = 22/260 (8%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 I +A L + L TD Y+ YE A + + ++++ N+ Sbjct: 5 IIITLLAAATLTSCGEYNK----LLKSTDYEYK---YEAAKNYFAKGQYNRSATLLNELI 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A +SL M Y+ YQ AA Y YP + + G + Sbjct: 58 TILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFITYFNTYPRGTFTELARFHAGKALFLD 117 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + DQ +T +Q + +E + NS + A+ + +++L KE+ + Y G Sbjct: 118 TPEPRLDQSSTYQAIQQLQMFMEYFPNSVKKQEAQDMIFALQDKLVLKELYSAKLYYNLG 177 Query: 205 EYV-----AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----MDEAREVVSLIQE 255 Y+ + + Q L +Y ++ EE ++ A +A+ +A + E Sbjct: 178 NYMGNNYESCVITAQNALKDYPYTDYREELSILILRARYEMAIYSVEDKKADRYRETVDE 237 Query: 256 ------RYPQGYWARYVETL 269 +P+ + + E + Sbjct: 238 YYAFKNEFPESKYLKEAEKI 257 >gi|224539634|ref|ZP_03680173.1| hypothetical protein BACCELL_04542 [Bacteroides cellulosilyticus DSM 14838] gi|224518725|gb|EEF87830.1| hypothetical protein BACCELL_04542 [Bacteroides cellulosilyticus DSM 14838] Length = 271 Score = 96.0 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 91/262 (34%), Gaps = 22/262 (8%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + +A L + L TD Y+ YE A + + +++A N+ Sbjct: 5 ILITLLAAVLLSSCGEYNK----LLKSTDYEYK---YEAAKNYFAKGQYNRAATLLNELI 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A +SL M Y+ YQ AA +Y YP + + G + Sbjct: 58 AILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFVQYFNVYPRGTFTELARFHAGKALYLD 117 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + DQ T +Q + +E + S + A+ + +++L KE + Y G Sbjct: 118 TPEPRLDQSGTYAAIQQLQMFMEYFPQSSKKEEAQDMIFKLQDKLVMKEYLSAKLYYNLG 177 Query: 205 EYV-----AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----MDEAREVVSLIQE 255 Y+ + + Q L +Y E+ ++ A +A+ A + E Sbjct: 178 NYLGNNYQSCVITAQNALKDYPYTNLREDLSILILRAKYEMAIYSVEDKRAERYRETVDE 237 Query: 256 ------RYPQGYWARYVETLVK 271 +P+ + + + + K Sbjct: 238 YYAFKNEFPESKYMKEADRIFK 259 >gi|255691532|ref|ZP_05415207.1| putative lipoprotein [Bacteroides finegoldii DSM 17565] gi|260622922|gb|EEX45793.1| putative lipoprotein [Bacteroides finegoldii DSM 17565] Length = 267 Score = 96.0 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 94/260 (36%), Gaps = 22/260 (8%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 I +A L + L TD Y+ YE A + + ++++ N+ Sbjct: 5 IIITLLAAATLTSCGEYNK----LLKSTDYEYK---YEAAKNYFAKGQYNRSATLLNELI 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A +SL M Y+ YQ AA Y YP + + G + Sbjct: 58 TILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFITYFNTYPRGTFTELARFHAGKALFLD 117 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + DQ +T +Q + +E + NS + A+ + +++L KE+ + Y G Sbjct: 118 TPEPRLDQSSTYQAIQQLQMFMEYFPNSSKKQEAQDMIFALQDKLVLKELYSAKLYYNLG 177 Query: 205 EYV-----AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----MDEAREVVSLIQE 255 Y+ + + Q L +Y ++ EE ++ A +A+ + I E Sbjct: 178 NYLGNNYESCVITAQNALKDYPYTDYREELSILILRARYEMAIYSVEDKKMDRYRETIDE 237 Query: 256 ------RYPQGYWARYVETL 269 +P+ + + E + Sbjct: 238 YYAFKNEFPESKYLKEAEKI 257 >gi|325270799|ref|ZP_08137390.1| hypothetical protein HMPREF9141_2600 [Prevotella multiformis DSM 16608] gi|324986915|gb|EGC18907.1| hypothetical protein HMPREF9141_2600 [Prevotella multiformis DSM 16608] Length = 274 Score = 95.6 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 81/262 (30%), Gaps = 27/262 (10%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 AV L G + + V YE A + + A Sbjct: 11 AVLLLTGCAHE------YNQVYKTTNNDYKYEFAKECFTKGKYGFAVPLLQDLVTVEKGT 64 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 A++ L M +Y YQ A+ ++Y YP + + + +G S + + Sbjct: 65 DNAQECLYMLGMAEYGLKDYQAASETFKKYYQTYPRGQYAEMASFYIGQSLFEGTPEPRL 124 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG------ 204 DQ T + ++ Y N A+ + +++L KE R Y G Sbjct: 125 DQTPTVAAIAAFQDYLDIYPNGKLKGTAQQRLFALQDKLIRKEYLSARLYYNLGSYFGNC 184 Query: 205 -----EYVAAIPRFQLVLANYSDAEHAEE----------AMARLVEAYVALALMDEAREV 249 Y A I Q L +Y + E+ +A++ L +A + Sbjct: 185 TSGGNNYEACIITAQNALNDYPYSNMREDFAVLVMKSKFELAQMSVEAKKLQRFQDAEDE 244 Query: 250 VSLIQERYPQGYWARYVETLVK 271 YP + E ++ Sbjct: 245 CYGFINEYPDSKERKTAEEYIR 266 >gi|189466023|ref|ZP_03014808.1| hypothetical protein BACINT_02387 [Bacteroides intestinalis DSM 17393] gi|189434287|gb|EDV03272.1| hypothetical protein BACINT_02387 [Bacteroides intestinalis DSM 17393] Length = 274 Score = 95.6 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 80/226 (35%), Gaps = 15/226 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A + + +++A N+ A +SL M Y+ YQ AA +Y Sbjct: 34 YEAAKNYFAKGQYNRAATLLNELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQSFVQY 93 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP + + G + + DQ T +Q + +E + S A+ Sbjct: 94 YNVYPRGTFAELARFHAGKALYLDTPEPRLDQSGTYSAIQQLQMFMEYFPQSSKKDEAQD 153 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVE 235 + +++L KE R Y G Y+ + + Q L +Y E+ ++ Sbjct: 154 MIFKLQDKLVMKEYLSARMYYNLGNYLGNNYQSCVITAQNALKDYPYTNLREDLSILILR 213 Query: 236 AYVALAL----MDEAREVVSLIQE------RYPQGYWARYVETLVK 271 A +A+ A + E +P+ + + E + K Sbjct: 214 AKYEMAIYSVEDKRAERYRETVDEYYAFKNEFPESKYMKEAEKIFK 259 >gi|160885705|ref|ZP_02066708.1| hypothetical protein BACOVA_03709 [Bacteroides ovatus ATCC 8483] gi|237719449|ref|ZP_04549930.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|260174433|ref|ZP_05760845.1| hypothetical protein BacD2_21432 [Bacteroides sp. D2] gi|293370226|ref|ZP_06616786.1| outer membrane assembly lipoprotein YfiO [Bacteroides ovatus SD CMC 3f] gi|299146193|ref|ZP_07039261.1| conserved hypothetical protein [Bacteroides sp. 3_1_23] gi|315922700|ref|ZP_07918940.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156108518|gb|EDO10263.1| hypothetical protein BACOVA_03709 [Bacteroides ovatus ATCC 8483] gi|229451309|gb|EEO57100.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|292634723|gb|EFF53252.1| outer membrane assembly lipoprotein YfiO [Bacteroides ovatus SD CMC 3f] gi|298516684|gb|EFI40565.1| conserved hypothetical protein [Bacteroides sp. 3_1_23] gi|313696575|gb|EFS33410.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 267 Score = 95.6 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 94/260 (36%), Gaps = 22/260 (8%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 I +A L + L TD Y+ YE A + + ++++ N+ Sbjct: 5 IIITLLAAATLTSCGEYNK----LLKSTDYEYK---YEAAKNYFAKGQYNRSATLLNELI 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A +SL M Y+ YQ AA Y YP + + G + Sbjct: 58 TILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFITYFNTYPRGTFTELARFHAGKALFLD 117 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + DQ +T +Q + +E + NS + A+ + +++L KE+ R Y G Sbjct: 118 TPEPRLDQSSTYQAIQQLQMFMEYFPNSTKKQEAQDMIFALQDKLVLKELYSARLYYNLG 177 Query: 205 EYV-----AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----MDEAREVVSLIQE 255 Y+ + + Q L +Y ++ EE ++ A +A+ + I E Sbjct: 178 NYLGNNYESCVITAQNALKDYPYTDYREELSILVLRARHEMAIYSVEDKKMDRYRETIDE 237 Query: 256 ------RYPQGYWARYVETL 269 +P+ + + E + Sbjct: 238 YYAFKNEFPESKYLKEAEKI 257 >gi|237714494|ref|ZP_04544975.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262406359|ref|ZP_06082908.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294643239|ref|ZP_06721065.1| outer membrane assembly lipoprotein YfiO [Bacteroides ovatus SD CC 2a] gi|294806432|ref|ZP_06765273.1| outer membrane assembly lipoprotein YfiO [Bacteroides xylanisolvens SD CC 1b] gi|298482860|ref|ZP_07001043.1| hypothetical protein HMPREF0106_03328 [Bacteroides sp. D22] gi|229445263|gb|EEO51054.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262355062|gb|EEZ04153.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292641362|gb|EFF59554.1| outer membrane assembly lipoprotein YfiO [Bacteroides ovatus SD CC 2a] gi|294446295|gb|EFG14921.1| outer membrane assembly lipoprotein YfiO [Bacteroides xylanisolvens SD CC 1b] gi|295083909|emb|CBK65432.1| outer membrane assembly lipoprotein YfiO [Bacteroides xylanisolvens XB1A] gi|298271060|gb|EFI12638.1| hypothetical protein HMPREF0106_03328 [Bacteroides sp. D22] Length = 267 Score = 95.2 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 96/260 (36%), Gaps = 22/260 (8%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 I +A L + L TD Y+ YE A + + ++++ N+ Sbjct: 5 IIITLLAAATLTSCGEYNK----LLKSTDYEYK---YEAAKNYFAKGQYNRSATLLNELI 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A +SL M Y+ YQ AA Y YP + + G + Sbjct: 58 TILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFITYFNTYPRGTFTELARFHAGKALFLD 117 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + DQ +T +Q + +E + NS + A+ + +++L KE+ R Y G Sbjct: 118 TPEPRLDQSSTYQAIQQLQMFMEYFPNSTKKQEAQDMIFALQDKLVLKELYSARLYYNLG 177 Query: 205 EYV-----AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM-------DEAREVVS- 251 Y+ + + Q L +Y ++ EE ++ A +A+ D RE V Sbjct: 178 NYLGNNYESCVITAQNALKDYPYTDYREELSILILRARHEMAIYSVEDKKMDRYRETVDE 237 Query: 252 --LIQERYPQGYWARYVETL 269 + +P+ + + E + Sbjct: 238 YYAFKNEFPESKYLKEAEKI 257 >gi|150007834|ref|YP_001302577.1| hypothetical protein BDI_1192 [Parabacteroides distasonis ATCC 8503] gi|255013465|ref|ZP_05285591.1| hypothetical protein B2_06125 [Bacteroides sp. 2_1_7] gi|256840092|ref|ZP_05545601.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|262381665|ref|ZP_06074803.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|298376805|ref|ZP_06986760.1| lipoprotein [Bacteroides sp. 3_1_19] gi|301310138|ref|ZP_07216077.1| putative lipoprotein [Bacteroides sp. 20_3] gi|149936258|gb|ABR42955.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] gi|256739022|gb|EEU52347.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|262296842|gb|EEY84772.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|298266683|gb|EFI08341.1| lipoprotein [Bacteroides sp. 3_1_19] gi|300831712|gb|EFK62343.1| putative lipoprotein [Bacteroides sp. 20_3] Length = 269 Score = 95.2 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 77/187 (41%), Gaps = 5/187 (2%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A + + +SK+ ++ F A +SL + A Y YQ A+ E Y Sbjct: 34 YSYAKKYFNAKQYSKSATLLDELVTIFKGTAYAEESLYLLAQSYYGQKDYQTASQYFETY 93 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 T YP+ + + + G D DQ T ++ + +E Y S + A+ Sbjct: 94 YTTYPKGEFTELSRFYSGYGLYLDSPDPRLDQSQTYKAIEQLQLYLEYYPQSERAEEAQN 153 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVE 235 + + +LA KE+ R Y G Y+ + + Q L NY +++ EE M ++ Sbjct: 154 IMFELQEKLAYKELMATRLYFNLGTYMGNNFQSCVITAQNALKNYPYSKYREEFMFLIIR 213 Query: 236 AYVALAL 242 A LAL Sbjct: 214 AKYELAL 220 >gi|163788588|ref|ZP_02183033.1| TPR repeat protein [Flavobacteriales bacterium ALC-1] gi|159875825|gb|EDP69884.1| TPR repeat protein [Flavobacteriales bacterium ALC-1] Length = 276 Score = 95.2 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 92/251 (36%), Gaps = 17/251 (6%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 ++ + LV D + E+YE + ++K++ Q Sbjct: 15 LYILLTCILLVSCSDFQKTLKSEDVSEKYKMATELYE-------AEKWNKSFRLLEQILP 67 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 + A K + A Y+ +Y +++ +++I+ YP+S+ + +L Y Sbjct: 68 KYRGKPQAEKLTFIHAMCLYNMKEYYRSSYHFDKFISVYPQSEKMKEAGFLAAKGYYYNS 127 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 +Q+ T ++ M V + ++ Y+ A + +L K EI + Y + Sbjct: 128 PVYSKEQKETVEAIEKMQLFVNAHPDTQYLDEANSIIKELDFKLEKKAFEIAKQYDLIRD 187 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEA----------YVALALMDEAREVVSLIQE 255 Y A+I F L ++ A +EAM +A Y+ + EA + ++ Sbjct: 188 YKASIKSFNNFLFDFPGATLRKEAMFYRFDAAYNLAVNSVNYLKEERLKEAIDYYESFKK 247 Query: 256 RYPQGYWARYV 266 Y + Sbjct: 248 AYADSEFVGDA 258 >gi|327402044|ref|YP_004342882.1| outer membrane assembly lipoprotein YfiO [Fluviicola taffensis DSM 16823] gi|327317552|gb|AEA42044.1| outer membrane assembly lipoprotein YfiO [Fluviicola taffensis DSM 16823] Length = 262 Score = 95.2 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 78/214 (36%), Gaps = 10/214 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +++A E + + + Q + P S Y+ + A+ + Sbjct: 32 FKEANKLYDEGKYERCVALYEQVYQRSPRTPQGEVSFYRLGKACYNVEDWYLASYYLSAF 91 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 ++P S V+ +L + + + DQ T + L + V R+ NS + F Sbjct: 92 QAKFPYSPKVEETMFLAALCAVENSPEASLDQHETDVALNELQSFVSRFPNSERLDTCNF 151 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + R +L K+ + Y K Y AA+ Q L NY + + E+ A L+ L Sbjct: 152 VMDKLRLKLEHKDFMNVKLYSKTENYRAAVVSSQQFLDNYPRSLNREDCWAILIRNSYHL 211 Query: 241 ALM----------DEAREVVSLIQERYPQGYWAR 264 A+ D+ E ++ +P + R Sbjct: 212 AINSIDAKLEERIDQTIERFNIFLVEFPNSNYLR 245 >gi|223934944|ref|ZP_03626863.1| TPR repeats containing protein [bacterium Ellin514] gi|223896397|gb|EEF62839.1| TPR repeats containing protein [bacterium Ellin514] Length = 335 Score = 94.8 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 66/172 (38%), Gaps = 8/172 (4%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-----YSAGK--YQQAASLGEEYITQY 124 N K E + ++ P++ +A ++ + + + G Y QAA E +Y Sbjct: 154 NMDKTVEMYEMIIKNGPYSDIAPQAQMDIGAAREKQTRFLNGNEPYIQAAKAYERAADRY 213 Query: 125 PESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 + Y G++Y + R YDQ + + + Y N P V + + Sbjct: 214 HDQPKFAADALYKAGLAYNKQARTAEYDQNTAGQAIATFTDFMTLYPNDPRVSESEKTIA 273 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + + A +I R+Y Y +A + VL ++ A ++ RL E Sbjct: 274 ALKTEQARGNYQIARFYDNGHHYKSAQIYYNEVLIQDPNSPLAASSLKRLAE 325 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 28/93 (30%), Gaps = 8/93 (8%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L A + Y A ++ +P S YL Y + +D + Sbjct: 53 QLDVAQQAFDKKDYGLALKAARRVVSNWPLSDFAPKAEYLAARCYEEKTQD--------E 104 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + +++E+Y + + N+ Sbjct: 105 KAFKEYQKLLEKYPKADNYQEILQRQFAICNRF 137 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 72/198 (36%), Gaps = 19/198 (9%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A ++++ A + + ++P + A K+ ++A + ++A ++ + + Sbjct: 57 AQQAFDKKDYGLALKAARRVVSNWPLSDFAPKAEYLAARCYEEKTQDEKAFKEYQKLLEK 116 Query: 124 YPESKNVDYVY---------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 YP++ N + +L G + ++ +P+ ++ I++ S Sbjct: 117 YPKADNYQEILQRQFAICNRFLGGQ-WFKLWGYIPFFP-NMDKTVEMYEMIIKNGPYSDI 174 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE-HAEEAMARL 233 A+ + R + R+ Y+ A ++ Y D A +A+ + Sbjct: 175 APQAQMDIGAAREKQ-------TRFLNGNEPYIQAAKAYERAADRYHDQPKFAADALYKA 227 Query: 234 VEAYVALALMDEAREVVS 251 AY A E + + Sbjct: 228 GLAYNKQARTAEYDQNTA 245 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 34/75 (45%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A ++++ + + +Y A+ + V++N+ ++ A +A Y ++A + Sbjct: 50 AKDQLDVAQQAFDKKDYGLALKAARRVVSNWPLSDFAPKAEYLAARCYEEKTQDEKAFKE 109 Query: 250 VSLIQERYPQGYWAR 264 + E+YP+ + Sbjct: 110 YQKLLEKYPKADNYQ 124 >gi|302346858|ref|YP_003815156.1| outer membrane assembly lipoprotein YfiO [Prevotella melaninogenica ATCC 25845] gi|302150288|gb|ADK96549.1| outer membrane assembly lipoprotein YfiO [Prevotella melaninogenica ATCC 25845] Length = 274 Score = 94.8 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 90/265 (33%), Gaps = 24/265 (9%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 I +C ++ + + T+ Y+ YE A + + A Sbjct: 5 ILIGICAVLLLTSCAHEYNQVYKTTNNDYK---YEFAKECFAKGKYGFAVPLLQDLVTIE 61 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 A++ L M A +Y YQ A+ ++Y YP + + + +G S + + Sbjct: 62 KGTDNAQECLYMLAMAEYCLKDYQAASETFKKYYQTYPRGQYAEMASFYIGQSLFEGTPE 121 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--- 204 DQ T + ++ + N + A+ + +++L KE + Y G Sbjct: 122 PRLDQTPTVAAIAAFQEYLDIFPNGKMKETAQQRLFALQDKLVRKEYLNAKLYYNLGSYF 181 Query: 205 --------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEA 246 Y A I Q L +Y ++ E ++++ LA M +A Sbjct: 182 GNCTSGGNNYEACIITAQNALNDYPYSDLRENFAILVMKSKFELAQMSVEEKKVQRFQDA 241 Query: 247 REVVSLIQERYPQGYWARYVETLVK 271 + YP+ + E +K Sbjct: 242 EDECYGFINEYPESKERKTAEDYIK 266 >gi|288940692|ref|YP_003442932.1| tol-pal system protein YbgF [Allochromatium vinosum DSM 180] gi|288896064|gb|ADC61900.1| tol-pal system protein YbgF [Allochromatium vinosum DSM 180] Length = 289 Score = 94.0 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 48/136 (35%), Gaps = 8/136 (5%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 T +R++Y + LKE+ + +A FN R +P A + Y Sbjct: 154 PAPETHGASERDLYSQGFEHLKERQYQEAKTAFNDLLRRYPQGEYADNARYWLGETYYVL 213 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y A + + + P S V +G + Q A + + R++ Sbjct: 214 REYPAALAEYDRLVELNPASAKVPGALLKIGFIQYE--------QNAIEQARATLERVIR 265 Query: 168 RYTNSPYVKGARFYVT 183 Y NS + AR + Sbjct: 266 EYPNSTEARLARDRLE 281 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 41/119 (34%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R + + ++ RY Y AR+++ G Y EY AA+ Sbjct: 177 RQYQEAKTAFNDLLRRYPQGEYADNARYWL--------------GETYYVLREYPAALAE 222 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + ++ + A+ ++ +++AR + + YP AR ++ Sbjct: 223 YDRLVELNPASAKVPGALLKIGFIQYEQNAIEQARATLERVIREYPNSTEARLARDRLE 281 >gi|319901963|ref|YP_004161691.1| outer membrane assembly lipoprotein YfiO [Bacteroides helcogenes P 36-108] gi|319416994|gb|ADV44105.1| outer membrane assembly lipoprotein YfiO [Bacteroides helcogenes P 36-108] Length = 267 Score = 94.0 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 82/226 (36%), Gaps = 15/226 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A + + +++A N+ A +SL M Y+ YQ AA +Y Sbjct: 34 YEAAKTYFAKGQYNRAATLLNELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFIQY 93 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP + + G + + DQ T +Q + +E + S + A+ Sbjct: 94 YNVYPRGTYTELARFHAGKALYLDTPEPRLDQSGTYSAIQQLQMFMEYFPKSAKKEEAQN 153 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVE 235 + +++L KE + Y G Y+ + + Q L +Y E+ ++ Sbjct: 154 MIFALQDKLVMKEYLSAKLYYNLGNYLGNNYQSCVITAQNALKDYPYTNLREDLSILILR 213 Query: 236 AYVALALMD----------EAREVVSLIQERYPQGYWARYVETLVK 271 A LA+ EA + + +P+ + + E + K Sbjct: 214 AKYELAVYSVEDKKPERYREAIDEYYAFKNEFPESKYIKEAERIFK 259 >gi|333030111|ref|ZP_08458172.1| outer membrane assembly lipoprotein YfiO [Bacteroides coprosuis DSM 18011] gi|332740708|gb|EGJ71190.1| outer membrane assembly lipoprotein YfiO [Bacteroides coprosuis DSM 18011] Length = 272 Score = 93.3 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 89/262 (33%), Gaps = 22/262 (8%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 I +A L + S D YE A + + ++KA N+ + Sbjct: 5 IIITLLAAIVLSSCGQYSKLLKSKDYEYK-------YEAAKTYYAKGQYNKASTLLNELT 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 F A +S+ + + Y AA+ Y T YP + + Y G S Sbjct: 58 MIFKGTDKAEESVYLLGMCYMNQKDYTTAATTFITYYTSYPSGRYAEIARYQAGKSLYLD 117 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + DQ +T +Q + +E Y NS A + + +L KE + Y G Sbjct: 118 TPEPRLDQTSTYKAIQELHLYLEEYPNSARKTEAEDMMFELQEKLVKKEYLASKLYYDLG 177 Query: 205 -----EYVAAIPRFQLVLANYSDAEHAEE-------AMARLVEAYVALALMDEAREVVS- 251 Y + I Q L +Y + EE A + E V + R+ + Sbjct: 178 LYMGNNYQSCIITAQNTLNDYPYTKQREELSVLILRAKYAIAENSVEEKKDERYRDAIDE 237 Query: 252 --LIQERYPQGYWARYVETLVK 271 + +P+ + + E + K Sbjct: 238 YYAFKNEFPESKYVKEAEKIFK 259 >gi|268317073|ref|YP_003290792.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM 4252] gi|262334607|gb|ACY48404.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM 4252] Length = 1000 Score = 92.9 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 34/211 (16%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 Y + + +Y+ + N+ +A FN+ + P + ++L ++ + Sbjct: 573 YRQAAAEGESDYALYQIGQAYYNAGNYEEALRTFNRLLEEHPESTWREEALYQIGYIHFL 632 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 +Y QA + + P Y +G + R + + R++ Sbjct: 633 NQEYDQAIAAYRRLLELAPNDPLAAKAQYGIGDALFNAGR--------LEAAVNAYKRVL 684 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP--RFQLVLAN----Y 220 ERY SP+V A + +AA R Q ++ + Y Sbjct: 685 ERYPQSPFVADAATSIHFAL--------------------IAAGNEARAQALIDSFATAY 724 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVS 251 D +E R EA +EA + Sbjct: 725 PDTRIVDELRFRRAEALYRSGRSEEAIRALE 755 Score = 73.6 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 47/230 (20%), Positives = 89/230 (38%), Gaps = 31/230 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++KA L ++QN++ A E F + R P A +L +A Y G+ +A +L +Y Sbjct: 439 FQKAWLQYRQQNYAAASEAFLELYRQDPRGPKAGDALFWAAESFYQLGRLDRAEALFRDY 498 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP----YVK 176 + +P+ +V+ +Y +G Y + Q+ + +Q + + Y + Y Sbjct: 499 LRSFPDGAHVEAAHYALGWVYFR--------QQRYEAAIQAFQQFLRAYRRTEEAVPYRL 550 Query: 177 GARFY--------------VTVGRNQLAAKE-----VEIGRYYLKRGEYVAAIPRFQLVL 217 A + R A E +IG+ Y G Y A+ F +L Sbjct: 551 DALLRLADSYYALKRYPEAIRYYRQAAAEGESDYALYQIGQAYYNAGNYEEALRTFNRLL 610 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 + ++ EEA+ ++ + D+A + E P A + Sbjct: 611 EEHPESTWREEALYQIGYIHFLNQEYDQAIAAYRRLLELAPNDPLAAKAQ 660 Score = 72.1 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 40/277 (14%), Positives = 82/277 (29%), Gaps = 68/277 (24%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 ++Y + ++ A F + +A F R FP + +V Sbjct: 460 ELYRQDPRGPKAGDALFWAAESFYQLGRLDRAEALFRDYLRSFPDGAHVEAAHYALGWVY 519 Query: 105 YSAGKYQQAASLGEEYITQYPESKNV---------------------------------- 130 + +Y+ A ++++ Y ++ Sbjct: 520 FRQQRYEAAIQAFQQFLRAYRRTEEAVPYRLDALLRLADSYYALKRYPEAIRYYRQAAAE 579 Query: 131 ---DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR- 186 DY Y +G +Y + L+ +R++E + S + + A + + Sbjct: 580 GESDYALYQIGQAYYNA--------GNYEEALRTFNRLLEEHPESTWREEALYQIGYIHF 631 Query: 187 ---------------------NQLAAK-EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + LAAK + IG G AA+ ++ VL Y + Sbjct: 632 LNQEYDQAIAAYRRLLELAPNDPLAAKAQYGIGDALFNAGRLEAAVNAYKRVLERYPQSP 691 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +A + A +A A+ ++ YP Sbjct: 692 FVADAATSIHFALIAAGNEARAQALIDSFATAYPDTR 728 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 90/268 (33%), Gaps = 61/268 (22%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 V + R ++ A + ++A Y+ + + +P +A ++LL A+ Q G Sbjct: 133 PGVPATQAARALFWMAESAQRLGRPAEAIGYYRRLADTYPNTRLAPQALLAMAYTQVEMG 192 Query: 109 KYQQAASLGEEYITQYPESKNV-------DYVYYLVGMSYAQMIRDVPY----------- 150 Y +AA E +YP + VYY +G Y + I +V Sbjct: 193 AYDEAARTFEVLAARYPAAPEARGLGLALAQVYYELG-DYRRAIDEVQRRLPDLKGEAQQ 251 Query: 151 -----------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV--------------- 184 R ++ + Y R++E +SPY + A + + Sbjct: 252 QAWLLLAESYNQLRDSENAIVYYRRVLED-PDSPYYRRALYGLAWNYYFEGVYQWAADHF 310 Query: 185 ------GRNQLAAKEVEIGRYYLK-----RGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 R+ LA K YY E A+ F+ V+ + D+ A A L Sbjct: 311 RQVREGRRDTLAMK----ATYYEAVCRKLAREPQQALELFRTVVLEWPDSPLAPHAQYEL 366 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGY 261 + +EA + + YP Sbjct: 367 ALLLYEMRRWEEAHDAFDFLVRTYPDSE 394 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 78/256 (30%), Gaps = 57/256 (22%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + Y +AV + +A E F ++P + +A + A + Y ++++ Sbjct: 319 DTLAMKATYYEAVCRKLAREPQQALELFRTVVLEWPDSPLAPHAQYELALLLYEMRRWEE 378 Query: 113 AASLGEEYITQYPESKNVDYVYYLVG-----MSYAQ------------------------ 143 A + + YP+S+ + + G + + Sbjct: 379 AHDAFDFLVRTYPDSELLGDALRMRGYTAIALGHFDEAYESFDRAVALQAASPQLRTEIA 438 Query: 144 -MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV------------------TV 184 + Y Q+ + + + P A F+ Sbjct: 439 FQKAWLQYRQQNYAAASEAFLELYRQDPRGPKAGDALFWAAESFYQLGRLDRAEALFRDY 498 Query: 185 GRNQLAAKEVEIGRY-----YLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVE 235 R+ VE Y Y ++ Y AAI FQ L Y + +A+ RL + Sbjct: 499 LRSFPDGAHVEAAHYALGWVYFRQQRYEAAIQAFQQFLRAYRRTEEAVPYRLDALLRLAD 558 Query: 236 AYVALALMDEAREVVS 251 +Y AL EA Sbjct: 559 SYYALKRYPEAIRYYR 574 Score = 58.6 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 71/239 (29%), Gaps = 33/239 (13%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 D R ++ +A L +A + +P + ++ L + G+Y Sbjct: 61 PDDPRVPEALFYEAEARLALGQTDEAAALLRVFAARYPTHPLVYEAQLALGKYFFDTGRY 120 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + + P + M R + Y R+ + Y Sbjct: 121 DDARQAFGQALR--PGVPAT-----QAARALFWMAESAQRLGRPA-EAIGYYRRLADTYP 172 Query: 171 NSPYVKGARFYVTVGRNQLAAK-------EVEIGRY----------------YLKRGEYV 207 N+ A + + ++ A EV RY Y + G+Y Sbjct: 173 NTRLAPQALLAMAYTQVEMGAYDEAARTFEVLAARYPAAPEARGLGLALAQVYYELGDYR 232 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 AI Q L + E ++A L E+Y L + A + E P + R Sbjct: 233 RAIDEVQRRLPDLKG-EAQQQAWLLLAESYNQLRDSENAIVYYRRVLED-PDSPYYRRA 289 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 70/213 (32%), Gaps = 22/213 (10%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V L + + A+ + ++ + + F Q +P ++L A + Sbjct: 19 VALQAQPAPPGPAVSFAHALALHSDGFYTLSAQTFAQFRSTYPDDPRVPEALFYEAEARL 78 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + G+ +AA+L + +YP V +G +D Q + Sbjct: 79 ALGQTDEAAALLRVFAARYPTHPLVYEAQLALG--------KYFFDTGRYDDARQAFGQA 130 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 + + A F++ +L G AI ++ + Y + Sbjct: 131 LRPGVPATQAARALFWMAESAQRL--------------GRPAEAIGYYRRLADTYPNTRL 176 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 A +A+ + V + DEA ++ RYP Sbjct: 177 APQALLAMAYTQVEMGAYDEAARTFEVLAARYP 209 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 35/251 (13%), Positives = 75/251 (29%), Gaps = 66/251 (26%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR--------------- 94 + D + Y A + + +P + Sbjct: 650 APNDPLAAKAQYGIGDALFNAGRLEAAVNAYKRVLERYPQSPFVADAATSIHFALIAAGN 709 Query: 95 ----KSLLMS------------------AFVQYSAGKYQQAASLGEEYITQYPESKNVD- 131 ++L+ S A Y +G+ ++A E ++ S D Sbjct: 710 EARAQALIDSFATAYPDTRIVDELRFRRAEALYRSGRSEEAIRALEAFVR---GSHAPDL 766 Query: 132 --YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 Y + YA+ Q + + +++ + + A Sbjct: 767 MGEALYYLATLYAE--------QELYDEAERTLQQLLAAHAEHRRMPEAL---------- 808 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEAYVALALMDEARE 248 + +G LK+ Y AA+ F+ + + + +E A+ A + L EAR+ Sbjct: 809 ----LLLGNVQLKQERYEAALVSFRRLASMAPERSELLARALYGQSVALLELGRFAEARQ 864 Query: 249 VVSLIQERYPQ 259 ++ Q R+P+ Sbjct: 865 ALTEAQARFPE 875 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 71/203 (34%), Gaps = 24/203 (11%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +Y A L+ +++ + +A Q ++LL+ VQ +Y+ A Sbjct: 769 EALYYLATLYAEQELYDEAERTLQQLLAAHAEHRRMPEALLLLGNVQLKQERYEAALVSF 828 Query: 118 EEYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + P S+ + Y ++ ++ R Q ++ R+ + Sbjct: 829 RRLASMAPERSELLARALYGQSVALLELGRFA--------EARQALTEAQARFP--EDGQ 878 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 A + +G+ +LA E GR Y A + R Q E EA+ RL E Sbjct: 879 PAI--LLLGQARLAEAE---GRPDEAERLYRAVVGRAQD--------EAGAEALYRLGEL 925 Query: 237 YVALALMDEAREVVSLIQERYPQ 259 + A E +S + +P Sbjct: 926 LLRRGDPHRAIEELSRLPTLFPG 948 >gi|288926533|ref|ZP_06420451.1| lipoprotein [Prevotella buccae D17] gi|315609033|ref|ZP_07884003.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] gi|288336675|gb|EFC75043.1| lipoprotein [Prevotella buccae D17] gi|315249237|gb|EFU29256.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] Length = 282 Score = 92.9 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 84/245 (34%), Gaps = 20/245 (8%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K +L F L G + ++ D+ YE A +++A Sbjct: 1 MKKISLAALFV--AILLSGCAHEFNQVYKSDNYPYK------YEYAKECFAAGKYTRAAT 52 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + A++ L M A +Y YQ A+ ++Y + YP + + Y VG Sbjct: 53 LLGELVTVMKGTENAQECLYMYAMAEYCMRDYQTASEYFKKYYSSYPRGQYAEMAKYYVG 112 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 S + DQ T + ++ + + + A+ + +++L KE+ + Sbjct: 113 ESLYMSTPEPRLDQSQTYSAISAYQEYLDLFPDGKLKQQAQQRLFALQDKLVQKELYNAQ 172 Query: 199 YYLKRG-----------EYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYVALALMDEA 246 Y G Y A I Q L Y + E A + Y + EA Sbjct: 173 LYYDLGTYFGNCTSGGNNYQACIVTSQNALKEYPYSSKRERFATLLMKSKYELAKMSVEA 232 Query: 247 REVVS 251 +++ Sbjct: 233 KQMER 237 >gi|325297928|ref|YP_004257845.1| outer membrane assembly lipoprotein YfiO [Bacteroides salanitronis DSM 18170] gi|324317481|gb|ADY35372.1| outer membrane assembly lipoprotein YfiO [Bacteroides salanitronis DSM 18170] Length = 277 Score = 92.9 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 52/271 (19%), Positives = 95/271 (35%), Gaps = 32/271 (11%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 I ++V L ++ + TD Y+ YE A + + S+A + Sbjct: 5 IILSMLSVTMLSSCGEYNT----VLKSTDYEYK---YEAAKGYFAKGQNSRAATLLEELI 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A +S M A ++ G Y A+ Y T YP + + G S Sbjct: 58 PILKGTSNAEESAYMLAMTYFNQGDYISASHYFNVYYTTYPRGTYTELARFFCGKSLYLD 117 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + DQ +T + + +E + S A+ + +++L KE + Y G Sbjct: 118 TPEPRLDQTSTYKAIDELQMFIEYFPTSSRKDLAQNMIYELQDKLVEKEYLSAKLYYDLG 177 Query: 205 -------------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---------- 241 Y+AA+ Q VL +Y + E+ ++ A +A Sbjct: 178 SYTGNTSYSSTGNNYLAAVVTAQNVLRDYPYTKRREDLSILILRAKYDMAKESVLEKKEE 237 Query: 242 -LMDEAREVVSLIQERYPQGYWARYVETLVK 271 + D E + + YP+ + + VE + K Sbjct: 238 RMRDAIDEYYA-FKNEYPESKYIKEVEAIYK 267 >gi|154492873|ref|ZP_02032499.1| hypothetical protein PARMER_02512 [Parabacteroides merdae ATCC 43184] gi|154087178|gb|EDN86223.1| hypothetical protein PARMER_02512 [Parabacteroides merdae ATCC 43184] Length = 269 Score = 92.5 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 74/187 (39%), Gaps = 5/187 (2%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A + + +SK+ ++ F A +SL + A Y YQ A+ Y Sbjct: 34 YSYAKKYFNAKQYSKSATLLDELVPIFKGTANAEESLYLLAQSYYGQKDYQTASQYFNTY 93 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 T YP+ + + Y G D DQ T + + +E Y S K A+ Sbjct: 94 YTTYPKGEFTELARYYSGYGLYLDSPDPRLDQAQTYEAINQLQLYLEYYPQSERAKEAQN 153 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG-----EYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + + +LA KE+ R Y G Y++ + Q L NY +++ EE M + Sbjct: 154 IMFELQEKLAYKELLAVRLYFNLGTYMGNNYLSCVITAQNALKNYPYSKYREEFMFYTIR 213 Query: 236 AYVALAL 242 A LA+ Sbjct: 214 AKYELAV 220 >gi|311748467|ref|ZP_07722252.1| putative TPR repeat protein [Algoriphagus sp. PR1] gi|311302789|gb|EAZ81230.2| putative TPR repeat protein [Algoriphagus sp. PR1] Length = 296 Score = 92.1 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 87/261 (33%), Gaps = 26/261 (9%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 I I L + + + E+Y A + +E ++KA +++ Sbjct: 6 IIVLIVGIALTACGPFNKLEKSTNW-------EELYAGANKYYQEGEYNKAIILYDKVLP 58 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 + A + A + +Y +AA + Y S + ++ + Sbjct: 59 VIRGSEKAELADYNYANCHFKTKRYIEAAGYFNNFYRTYNRSPLAEEALFMRAYALYLDA 118 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL--KR 203 D DQ++++ + + + V + S + A +T + K + Y K Sbjct: 119 PDFNLDQQSSQEAVGAIQQFVTLFPGSASYERAMEMLTDLEKRFEEKAYQQAEMYYTLKD 178 Query: 204 GEYVAAIPRF-----QLVLANYSDAEHAEEAMARLVE-----------AYVALALMDEAR 247 G Y R Q +Y ++++ EE +LVE A L D A Sbjct: 179 GLYPGQNMRACAISIQNFAKDYPESKYNEELAYKLVEVTTKYAENSVYAKKEERLTD-AL 237 Query: 248 EVVSLIQERYPQGYWARYVET 268 + +YP+ + VE Sbjct: 238 RFAGVFYRKYPESAYTSEVEK 258 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 42/126 (33%), Gaps = 7/126 (5%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGEEYITQYPES-- 127 ++ +A E + F +++ + Y + A + + YPES Sbjct: 147 SYERAMEMLTDLEKRFEEKAY-QQAEMYYTLKDGLYPGQNMRACAISIQNFAKDYPESKY 205 Query: 128 -KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + + Y V YA+ ++R T L++ +Y S Y Y R Sbjct: 206 NEELAYKLVEVTTKYAENSVYAKKEERLT-DALRFAGVFYRKYPESAYTSEVEKYEAEAR 264 Query: 187 NQLAAK 192 ++ Sbjct: 265 EEMQEH 270 >gi|189462715|ref|ZP_03011500.1| hypothetical protein BACCOP_03412 [Bacteroides coprocola DSM 17136] gi|189430584|gb|EDU99568.1| hypothetical protein BACCOP_03412 [Bacteroides coprocola DSM 17136] Length = 278 Score = 91.7 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 91/277 (32%), Gaps = 34/277 (12%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K+ + S V G + V YE A + + SKA Sbjct: 1 MKKYIVMAILSAGVLSSCG---------EYNKVLKSTDNEYKYEAAKSYFAKGQNSKAAT 51 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + A +S M A Y+ G Y A+ Y T YP + + G Sbjct: 52 LLEDLALIMKGTSNAEESAYMLAMTYYNQGDYITASHYFNTYYTTYPRGTYTELARFYSG 111 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 + + DQ +T ++ + +E + S + A+ + +++L KE Sbjct: 112 KALYLDTPEPRLDQSSTYKAIEELQMFIEYFPESDRKELAQNMIFELQDKLVEKEFLSAL 171 Query: 199 YYLKRG-------------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---- 241 Y G Y AA+ Q +L Y + E+ ++ A +A Sbjct: 172 LYYDLGSYTGNTVYSSTGNNYQAAVVTAQNILREYPYTKRREDLSILILRAKYDMAKESV 231 Query: 242 -------LMDEAREVVSLIQERYPQGYWARYVETLVK 271 + + E + I E +P+ + VE + K Sbjct: 232 PEKKEDRMRETIDEYYAFINE-FPESKYKSEVERIFK 267 >gi|330901399|gb|EGH32818.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv. japonica str. M301072PT] Length = 167 Score = 91.7 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 36/68 (52%) Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 E+ + YYL R YVAA R + V+ N+ + + +A +VE+Y L L D A + Sbjct: 2 YEIHVADYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLE 61 Query: 252 LIQERYPQ 259 +++ YP Sbjct: 62 VLKTNYPN 69 >gi|298373604|ref|ZP_06983593.1| lipoprotein [Bacteroidetes oral taxon 274 str. F0058] gi|298274656|gb|EFI16208.1| lipoprotein [Bacteroidetes oral taxon 274 str. F0058] Length = 270 Score = 91.7 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 68/189 (35%), Gaps = 6/189 (3%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAAS 115 E + A + + + KA N F+ +++ + A Y A+ Sbjct: 22 NEERFTAAKSYFLSKKYQKASTLLNDLVVANAFSGKKMEEAMYLLAESYLGDKDYYSASD 81 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 EYI +P + Y D DQ +T + + ++ Y + V Sbjct: 82 SYAEYIKSFPRGDYAKDAKFKTAYCYYLDSPDARLDQTSTVHAINAFTEYIQIYPDGEKV 141 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRG-----EYVAAIPRFQLVLANYSDAEHAEEAM 230 + A Y+ +N+LA K + Y G Y +AI Q L Y + ++ E+ Sbjct: 142 QEAYNYIEELQNKLAYKSYLEAKLYYNLGLYLGNNYRSAIISAQNTLKQYPETKYREDLS 201 Query: 231 ARLVEAYVA 239 +++A A Sbjct: 202 FLILKAKYA 210 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 75/223 (33%), Gaps = 43/223 (19%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V ++ + + + +Y A +L ++++ A + + + + FP A+ + +A+ Y Sbjct: 49 VVANAFSGKKMEEAMYLLAESYLGDKDYYSASDSYAEYIKSFPRGDYAKDAKFKTAYCYY 108 Query: 106 SAG--------KYQQAASLGEEYITQYPESKNVDYVY--------------YLVGMSYAQ 143 A + EYI YP+ + V Y YL Y Sbjct: 109 LDSPDARLDQTSTVHAINAFTEYIQIYPDGEKVQEAYNYIEELQNKLAYKSYLEAKLYYN 168 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 + + + + +++Y + Y + F + + A + Y Sbjct: 169 LGLYLG---NNYRSAIISAQNTLKQYPETKYREDLSFLILKAKYAEAKH--SVSELY--- 220 Query: 204 GEYVAAIPRFQLVLANY-------SDAEHAEEAMARLVEAYVA 239 RF V+ Y ++++ +EA VEA Sbjct: 221 ------SERFSEVIDEYYKYSSEFQNSKNIKEAEHIFVEAKKQ 257 >gi|224024034|ref|ZP_03642400.1| hypothetical protein BACCOPRO_00751 [Bacteroides coprophilus DSM 18228] gi|224017256|gb|EEF75268.1| hypothetical protein BACCOPRO_00751 [Bacteroides coprophilus DSM 18228] Length = 284 Score = 91.3 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 96/266 (36%), Gaps = 27/266 (10%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 IA+ L S + Y + Y+ + YE A + + +KA + Sbjct: 5 IAMALLSAGVLTSCGE-YNKVLKSTDYEYK-YEAAKEYFAKGQNTKAATLLEELVNILKG 62 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 ++L M A ++ G Y A+ Y T YP + + G + + Sbjct: 63 MMNGEEALYMQAMTYFNQGDYVTASHYFNTYYTTYPRGTYTELARFNCGRALYLDTPEPR 122 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG----- 204 DQ +T ++ + +E + S A+ + +++L KE + Y G Sbjct: 123 LDQSSTYKAIEELQMFIEYFPMSSRKDQAQSMIFELQDKLVEKEYMSAKLYYDLGSYTGN 182 Query: 205 --------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA-----------LMDE 245 Y+AA+ Q +L Y + E+ ++ A +A + D Sbjct: 183 AVYSSTGNNYLAAVITAQNILKEYPYTKMREDLSILILRAKYGMARESVLEKKEDRMRDT 242 Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271 E + I E +P+ + + VE++ K Sbjct: 243 IDEYYAFINE-FPESKYRKEVESIFK 267 >gi|218261682|ref|ZP_03476417.1| hypothetical protein PRABACTJOHN_02085 [Parabacteroides johnsonii DSM 18315] gi|218223862|gb|EEC96512.1| hypothetical protein PRABACTJOHN_02085 [Parabacteroides johnsonii DSM 18315] Length = 269 Score = 90.9 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 74/187 (39%), Gaps = 5/187 (2%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A + + +SK+ ++ + A +SL + A Y YQ A+ Y Sbjct: 34 YSYAKKYFNAKQYSKSATLLDELVPVLKGSAQAEESLYLLAQSYYGQKDYQTASQYFNTY 93 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 T YP+ + + Y G D DQ T + + +E Y S K A+ Sbjct: 94 YTTYPKGEYTELARYYSGYGLYLDSPDPRLDQAQTYEAINQLQLYLEYYPQSERAKEAQN 153 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG-----EYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + + +LA KE+ R Y G Y++ + Q L NY +++ EE M + Sbjct: 154 IMFELQEKLAYKELLAVRLYFNLGTYMGNNYLSCVITAQNALKNYPYSKYREEFMFYTIR 213 Query: 236 AYVALAL 242 A LA+ Sbjct: 214 AKYELAV 220 >gi|213861767|ref|ZP_03386237.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 77 Score = 90.9 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 10/77 (12%) Query: 125 PESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPY 174 P N+DYV Y+ G++ + D + + S++V Y NS Y Sbjct: 1 PTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQY 60 Query: 175 VKGARFYVTVGRNQLAA 191 A + +++LA Sbjct: 61 TTDATKRLVFLKDRLAK 77 >gi|198274587|ref|ZP_03207119.1| hypothetical protein BACPLE_00739 [Bacteroides plebeius DSM 17135] gi|198272034|gb|EDY96303.1| hypothetical protein BACPLE_00739 [Bacteroides plebeius DSM 17135] Length = 278 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 91/275 (33%), Gaps = 34/275 (12%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K+ + S V G + + + YE A + + S+A Sbjct: 1 MKKYIAMVLLSAGVLSSCGEYNKVLKSTDYEYK---------YEAAKSYFAKGQNSRAAT 51 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + +SL M Y+ G + A+ Y T YP + + G Sbjct: 52 ILEELIPILKGTANGEESLYMLGMTYYNQGDFVTASHYFNTYYTTYPRGTYTELARFHSG 111 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 + + DQ +T +Q + +E + S A+ + +++L KE + Sbjct: 112 KALYLDTPEPRLDQSSTYKAIQELQMFMEYFPTSQRKDIAQNMIFELQDKLVEKEYLSSK 171 Query: 199 YYLKRG-------------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---- 241 Y G Y+AAI Q VL Y + EE ++ A +A Sbjct: 172 LYYDLGSYSGNASYSSTGNNYLAAIVTAQNVLKEYPYTKLREELSILILRAKYHMAKESV 231 Query: 242 -------LMDEAREVVSLIQERYPQGYWARYVETL 269 + + E + + +P+ + + VE + Sbjct: 232 LDKREDRMRETVDEYYA-FKNEFPESKYMKEVEGI 265 >gi|254884530|ref|ZP_05257240.1| lipoprotein [Bacteroides sp. 4_3_47FAA] gi|294778637|ref|ZP_06744059.1| outer membrane assembly lipoprotein YfiO [Bacteroides vulgatus PC510] gi|254837323|gb|EET17632.1| lipoprotein [Bacteroides sp. 4_3_47FAA] gi|294447586|gb|EFG16164.1| outer membrane assembly lipoprotein YfiO [Bacteroides vulgatus PC510] Length = 285 Score = 90.2 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 96/282 (34%), Gaps = 32/282 (11%) Query: 13 EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72 + ++ K+ + ++ L Y + Y+ + YE A + + Sbjct: 2 RNYLNKMKKYIIIAL--VSGTVLTSCG------EYNKVLKSTDYEYK-YEAAKSYFGKGQ 52 Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 +KA + A +SL M Y+ G + A+ Y YP + Sbjct: 53 NTKAATILEELITIMKGTDKAEESLYMLGMTYYNQGDFITASHYFTTYYNTYPRGVYTEQ 112 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 Y G + + DQ +T +Q + +E + S + A+ + +++L K Sbjct: 113 ARYFSGKALFLDTPEPRLDQSSTYKAIQELQMFMEYFPTSSRRQDAQQMIFDLQDKLVMK 172 Query: 193 EVEIGRYYLKRG-------------EYVAAIPRFQLVLANYSDAEHAEE-------AMAR 232 + + Y G Y++ I Q L +Y + E+ A Sbjct: 173 DYLAAKLYYDLGSYTGNSTYSTTGNNYLSCIVTAQNALKDYPYTKMREDLSILVLRAKYD 232 Query: 233 LVEAYVALALMDEAREVVSL---IQERYPQGYWARYVETLVK 271 + +A V + RE + + +P + + VE++ K Sbjct: 233 MAKASVEEKKEERMRETIDEYYSFKNEFPDSKYTKEVESIYK 274 >gi|226227369|ref|YP_002761475.1| hypothetical protein GAU_1963 [Gemmatimonas aurantiaca T-27] gi|226090560|dbj|BAH39005.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 287 Score = 89.4 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 87/241 (36%), Gaps = 16/241 (6%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + S+A + G R D +++ ++ + + + A F + Sbjct: 5 LMLLLSVAAA-VAGCSRGF-------RPQDFATPEALFKASLQEFERKKWDNAQLGFERL 56 Query: 84 S----RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 + P +A + A ++ AA E +P+ G Sbjct: 57 TNDLSSRDPL--LAP-AYFYLALTHERKHEFLLAAQAFERVTDGFPDDTLAPTAMLGSGR 113 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 SY + R D + + + ++ Y ++ V+ A+ ++ A K+ G + Sbjct: 114 SYQSIWRRPSLDPEQGQKAVSVLRALLSSYPDAKEVEDAKARISTLEEWFAEKDYMTGVH 173 Query: 200 YLK-RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 Y++ R AI F+ V+ Y + A + RL E Y + ++A E + + + YP Sbjct: 174 YVRVRRAIDPAIIYFKDVVTTYPTTKAARLSWLRLNELYTKIRWKEDAAETCTAMWKAYP 233 Query: 259 Q 259 Sbjct: 234 G 234 >gi|145220537|ref|YP_001131246.1| putative lipoprotein [Prosthecochloris vibrioformis DSM 265] gi|145206701|gb|ABP37744.1| putative lipoprotein [Chlorobium phaeovibrioides DSM 265] Length = 298 Score = 89.0 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 97/285 (34%), Gaps = 54/285 (18%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 L++ AL + ++ G Q V +E Y +A F +++ + KA Sbjct: 7 LFRSALVVIVFASMALW-GCSSQK------PVVKAETQVKEGYSRASEFYQKEEYEKAAA 59 Query: 79 YFNQCSRDFPFAGVAR----KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 F+ A L + A + + +Y ++ + + + Q P S + Sbjct: 60 ELEPLL----FSSRATALEDDVLFLLADSYFQSEQYLLSSDMYDRLLQQVPRSPFREQAG 115 Query: 135 YLVGMSYAQMIRDVPYDQRATKLM----------------------LQYMSRIVERYTNS 172 +++ SY ++ DQ T+ L +++ ++ Sbjct: 116 FMLAQSYEKLSPVYELDQEYTRKAIESYSLWLGEYGTRDSAAVSRDLDTYRELLKINPDN 175 Query: 173 PYVKG-----------------ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + A + V ++LAA + R Y+ +Y AA F Sbjct: 176 ASYRERFEGFSREMKRQGSITHATKAIPVLYDKLAASAYSVARQYVVLKKYKAAGISFDE 235 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 V++ YS +A+ +E V EAR + ++YP+ Sbjct: 236 VVSRYSQTPWYRKALVGRIEVLVKRGKWFEARTAMDQFLQKYPES 280 >gi|150005556|ref|YP_001300300.1| hypothetical protein BVU_3041 [Bacteroides vulgatus ATCC 8482] gi|212693420|ref|ZP_03301548.1| hypothetical protein BACDOR_02936 [Bacteroides dorei DSM 17855] gi|237710477|ref|ZP_04540958.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237726984|ref|ZP_04557465.1| lipoprotein [Bacteroides sp. D4] gi|319640778|ref|ZP_07995491.1| hypothetical protein HMPREF9011_01088 [Bacteroides sp. 3_1_40A] gi|149933980|gb|ABR40678.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] gi|212664064|gb|EEB24638.1| hypothetical protein BACDOR_02936 [Bacteroides dorei DSM 17855] gi|229433840|gb|EEO43917.1| lipoprotein [Bacteroides dorei 5_1_36/D4] gi|229455199|gb|EEO60920.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|317387590|gb|EFV68456.1| hypothetical protein HMPREF9011_01088 [Bacteroides sp. 3_1_40A] Length = 278 Score = 89.0 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 91/270 (33%), Gaps = 30/270 (11%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 I ++ L Y + Y+ + YE A + + +KA + Sbjct: 5 IIIALVSGTVLTSCG------EYNKVLKSTDYEYK-YEAAKSYFGKGQNTKAATILEELI 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A +SL M Y+ G + A+ Y YP + Y G + Sbjct: 58 TIMKGTDKAEESLYMLGMTYYNQGDFITASHYFTTYYNTYPRGVYTEQARYFSGKALFLD 117 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + DQ +T +Q + +E + S + A+ + +++L K+ + Y G Sbjct: 118 TPEPRLDQSSTYKAIQELQMFMEYFPTSSRRQDAQQMIFDLQDKLVMKDYLAAKLYYDLG 177 Query: 205 -------------EYVAAIPRFQLVLANYSDAEHAEE-------AMARLVEAYVALALMD 244 Y++ I Q L +Y + E+ A + +A V + Sbjct: 178 SYTGNSTYSTTGNNYLSCIVTAQNALKDYPYTKMREDLSILVLRAKYDMAKASVEEKKEE 237 Query: 245 EAREVVSL---IQERYPQGYWARYVETLVK 271 RE + + +P + + VE++ K Sbjct: 238 RMRETIDEYYSFKNEFPDSKYTKEVESIYK 267 >gi|121999147|ref|YP_001003934.1| DNA uptake lipoprotein-like protein [Halorhodospira halophila SL1] gi|121590552|gb|ABM63132.1| DNA uptake lipoprotein-like protein [Halorhodospira halophila SL1] Length = 256 Score = 89.0 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 81/234 (34%), Gaps = 38/234 (16%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S + R +Y +A+ ++ + A ++ +P AR++LL +A+V+Y G+ Sbjct: 32 SAQEREQARSLYAEALEAVERGDLEAAQGMLDELQEAYPETRHARQALLEAAYVEYRLGQ 91 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD---------------------- 147 Y QA E + + + D Sbjct: 92 YPQAIERAEIF------HRQAAQ--------TEEQADDEDLRYALYLRAAAAHALWDATE 137 Query: 148 --VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 D + Y IV Y S + A + R+ +A +E+ R L G Sbjct: 138 GEAERDAAGARRAFGYYRDIVRDYPESERAEEAARRMNEIRSDVAEEELRRARRRLDDGA 197 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y A R + Y + A +A+A V+A L EA +++ ++P Sbjct: 198 YAEAAERGAWIAEQYPGQQAAADALALQVDALERLGREREAEATRRMLEIKHPD 251 >gi|303237038|ref|ZP_07323608.1| outer membrane assembly lipoprotein YfiO [Prevotella disiens FB035-09AN] gi|302482425|gb|EFL45450.1| outer membrane assembly lipoprotein YfiO [Prevotella disiens FB035-09AN] Length = 288 Score = 88.6 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 83/275 (30%), Gaps = 30/275 (10%) Query: 9 ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68 +C F + + K L F +A + ++ T YE A Sbjct: 1 MCNFAIQSEFMKKNILITF--VATLLFTSCAHEYNQVFKSTDYTYK------YEYAKECF 52 Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 +S A A + L M A ++ Y+ A+ ++Y YP Sbjct: 53 ANGKYSFAIPLLQDVVTIQKGTDNAEECLYMLAMSEFGMRDYEAASETFKKYFQTYPHGI 112 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + +G S + + DQ T + ++ Y N A+ + +++ Sbjct: 113 YAEMASFYIGQSLYEGTPEARLDQTPTVAAIAAFQDYLDLYPNGKMKSTAQQRLFALQDK 172 Query: 189 LAAKEVEIGRYYLKRGE------------YVAAIPRFQLVLANYSDAEHAEE-------- 228 L KE + Y G Y A I Q L ++ + E+ Sbjct: 173 LIRKEYLNAKLYYNLGSYFGNCGNDGGNNYEACIITAQSALNDFPYSSLREDFAILVMKG 232 Query: 229 --AMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +A++ L +A + YP Sbjct: 233 KFELAQMSVEEKKLQRYQDAEDECYGFINEYPDSK 267 >gi|265756511|ref|ZP_06090717.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|263233699|gb|EEZ19314.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 278 Score = 88.6 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 92/270 (34%), Gaps = 30/270 (11%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 I ++ L Y + Y+ + YE A + + +KA + Sbjct: 5 IIIALVSGTVLTSCG------EYNKVLKSTDYEYK-YEAAKSYFGKGQNTKAATILEELI 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A +SL M Y+ G + A+ Y YP + V Y G + Sbjct: 58 TIMKGTDKAEESLYMLGMTYYNQGDFITASHYFTTYYNTYPRGVYTEQVRYFSGKALFLD 117 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + DQ +T +Q + +E + S + A+ + +++L K+ + Y G Sbjct: 118 TPEPRLDQSSTYKAIQELQMFMEYFPTSSRRQDAQQMIFDLQDKLVMKDYLAAKLYYDLG 177 Query: 205 -------------EYVAAIPRFQLVLANYSDAEHAEE-------AMARLVEAYVALALMD 244 Y++ I Q L +Y + E+ A + +A V + Sbjct: 178 SYTGNSTYSTTGNNYLSCIVTAQNALKDYPYTKMREDLSILVLRAKYDMAKASVEEKKEE 237 Query: 245 EAREVVSL---IQERYPQGYWARYVETLVK 271 RE + + +P + + VE++ K Sbjct: 238 RMRETIDEYYSFKNEFPDSKYTKEVESIYK 267 >gi|284036226|ref|YP_003386156.1| outer membrane assembly lipoprotein YfiO [Spirosoma linguale DSM 74] gi|283815519|gb|ADB37357.1| outer membrane assembly lipoprotein YfiO [Spirosoma linguale DSM 74] Length = 299 Score = 88.6 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 94/259 (36%), Gaps = 21/259 (8%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 I I V FL+G S+ + Y+ A+ + K+ ++ +A F + Sbjct: 9 ILLGIGVVFLLGSCSPFSK------LQKSGSDDAKYKGALEYYKKGDWYRAGLLFEELIP 62 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 + + + A+ QY +Y +A+L +++ + S+ Y+ S + Sbjct: 63 VLKGSNESEMAQFYYAYTQYQQQQYLLSATLFKKFYETFARSEYAQEAMYMYAYSLYKDT 122 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG- 204 DQ T + + Y +S Y + + + R +L K E + Y K Sbjct: 123 PSFNLDQSNTLTATSALQDFINAYPDSKYKEESTKLILELRGKLERKAYEKAKLYYKTSG 182 Query: 205 ----EYVAAIPRFQLVLANYSDAEHAEE-------AMARLVEAYVALALMDEAREVVSLI 253 Y +A+ ++ D+ + EE A L + + + +E +S Sbjct: 183 FNIASYKSAVIAINNFQKDFPDSGYNEELAYLKVDAEFSLAQNSLETKQKERYQEAISYH 242 Query: 254 QE---RYPQGYWARYVETL 269 Q +YP + + E + Sbjct: 243 QAFVDKYPNSQFLKQSERM 261 >gi|193213682|ref|YP_001999635.1| TPR repeat-containing protein [Chlorobaculum parvum NCIB 8327] gi|193087159|gb|ACF12435.1| Tetratricopeptide TPR_2 repeat protein [Chlorobaculum parvum NCIB 8327] Length = 309 Score = 88.6 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 88/272 (32%), Gaps = 47/272 (17%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 C + SS + + V+ V Y++A + + + KA F+ Sbjct: 19 CIAISLSACSSSKLPAEQVSTVSQAESQYQRATELIDRKKYDKAIVVLESLL----FSTR 74 Query: 93 AR----KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 A L A Y +Y AA + + Q P+S + + SY Q+ Sbjct: 75 ATNLEDDVLHSLANSYYQKKQYLLAADMYRRLLQQTPDSPFAKSAQFELAKSYEQLSPFY 134 Query: 149 PYDQRATKLMLQYMSRIVERYT--NSPYVK-GARFY------------------------ 181 DQ T + S ++ Y +S + A Y Sbjct: 135 ELDQEYTVKAINEFSTYLDEYPLDDSAQAQSDAELYKELLKVNPTNASYKAKYDEAMAQL 194 Query: 182 ------------VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 + R++LA I Y++ +Y AA F +V+ Y D + + A Sbjct: 195 SNGAPASYSKSAILKLRDKLAHNRYSIALQYVRLKKYRAADIYFDVVINQYPDTKWVKSA 254 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261 V+ + EAR+ + Q+ YP Sbjct: 255 WLGKVDTNIRRNKWFEARQTIERFQQLYPDNS 286 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 32/89 (35%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A+ +++ + + A YF+ +P + + L K+ +A E + Sbjct: 219 YSIALQYVRLKKYRAADIYFDVVINQYPDTKWVKSAWLGKVDTNIRRNKWFEARQTIERF 278 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 YP++ Y M + R+ Sbjct: 279 QQLYPDNSKEVEASYKKVMEHFSEARNPE 307 >gi|304382427|ref|ZP_07364926.1| conserved hypothetical protein [Prevotella marshii DSM 16973] gi|304336435|gb|EFM02672.1| conserved hypothetical protein [Prevotella marshii DSM 16973] Length = 274 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 90/263 (34%), Gaps = 24/263 (9%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 F A+C L+ + + TD Y+ YE A + +A N+ Sbjct: 4 SFLTAICGLLLLTSCAHEFNLVYRSTDYNYK---YEYAKECFARGKYQRAITLLNELIHI 60 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 A++ L M +Y + Y+ A+ + ++Y T YP+ + + +G S + Sbjct: 61 EKGTDNAQECLFMLGMAEYCSKDYEGASEVFKKYCTSYPKGFYAETAAFYIGESLYRSTP 120 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG-- 204 + DQ AT + ++ Y +S A+ + +++L KE + Y G Sbjct: 121 EPRLDQSATVSAIAAYQEYLDLYQDSKLKSAAQQRLFDLQDKLVRKEYLSAKLYYNLGSY 180 Query: 205 ---------EYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYV---------ALALMDE 245 Y A I Q L +Y + E+ A+ + + L + Sbjct: 181 FGNCTSGGSNYEACIITAQNALKDYPYSNLREDFALLIMKSKFELAEQSVDSKRLERYQD 240 Query: 246 AREVVSLIQERYPQGYWARYVET 268 A + YP E Sbjct: 241 AEDECYGFINEYPDSRERDTAEK 263 >gi|206889500|ref|YP_002249884.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741438|gb|ACI20495.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM 11347] Length = 287 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 62/145 (42%), Gaps = 8/145 (5%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 Q + S ++ +E+Y+ A + +KE+ ++ A + F + ++++P + S Sbjct: 128 QKEPEQKKISPGQLKNPKEIYDSAHVDIKEKRYASARDKFQEITKNYPDFELLPNSYFWI 187 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 YS KY+ A EE++ +YP+ GM++ ++ + K Sbjct: 188 GETYYSEKKYEDAILAYEEFLKKYPKHDKAPGALLKEGMAFLEL--------KDKKTAKV 239 Query: 161 YMSRIVERYTNSPYVKGARFYVTVG 185 R++ERY S + A+ + Sbjct: 240 VFERVIERYPKSKEAEIAQQKIAEI 264 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 35/104 (33%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 I + Y + + + IG Y +Y AI ++ L Sbjct: 163 ARDKFQEITKNYPDFELLPNSY--------------FWIGETYYSEKKYEDAILAYEEFL 208 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y + A A+ + A++ L A+ V + ERYP+ Sbjct: 209 KKYPKHDKAPGALLKEGMAFLELKDKKTAKVVFERVIERYPKSK 252 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 50/137 (36%), Gaps = 22/137 (16%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 SA V +Y A +E YP+ + + Y+ +G +Y ++ + Sbjct: 149 DSAHVDIKEKRYASARDKFQEITKNYPDFELLPNSYFWIGETYYS--------EKKYEDA 200 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + +++Y GA + + +A E+ + A F+ V+ Sbjct: 201 ILAYEEFLKKYPKHDKAPGA-----LLKEGMAFLEL---------KDKKTAKVVFERVIE 246 Query: 219 NYSDAEHAEEAMARLVE 235 Y ++ AE A ++ E Sbjct: 247 RYPKSKEAEIAQQKIAE 263 >gi|332885276|gb|EGK05527.1| hypothetical protein HMPREF9456_02728 [Dysgonomonas mossii DSM 22836] Length = 284 Score = 87.1 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 65/182 (35%), Gaps = 6/182 (3%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A + ++ + + ++ + + ++ L + A + Y A Y Sbjct: 34 YEYAKKYFDQKKYGRTITLLDEILSAYTGSSKEQEILYLLAQSYFYDKDYTTATQYYTRY 93 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 ++P+ + + + D DQ +T +Q +E + S A+ Sbjct: 94 YNKFPKGEFTELARFNSAYGLYLDSPDARLDQTSTYKGIQEFQNFLEYFPQSEKAPEAQD 153 Query: 181 YVTVGRNQLAAKEVEIGRYYL------KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 + + +LA KE R Y + Y + + + L +Y +E EE +V Sbjct: 154 LMFKLQEKLAYKEFLAARLYYNLGLYNRENYYESCVVTAREALKSYPFSEFTEEFQILIV 213 Query: 235 EA 236 A Sbjct: 214 RA 215 >gi|289807701|ref|ZP_06538330.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 98 Score = 87.1 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 36/96 (37%), Gaps = 7/96 (7%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 +PF +++ L + Y ++ +A Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKKRRFAASA 89 >gi|323345700|ref|ZP_08085923.1| hypothetical protein HMPREF0663_12459 [Prevotella oralis ATCC 33269] gi|323093814|gb|EFZ36392.1| hypothetical protein HMPREF0663_12459 [Prevotella oralis ATCC 33269] Length = 274 Score = 87.1 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 85/263 (32%), Gaps = 24/263 (9%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 F ++C + + + D Y+ YE A + F +A Sbjct: 4 SFIASICAVFLLSNCAHEFNQVYKTNDYAYK---YEYAKECFAKGKFVRATTLLTDLITL 60 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 + L M A QY + Y+ AA +Y YP+ K + Y VG S Sbjct: 61 MKGTDNGEECLYMLAMSQYCSKDYEGAAQTFAKYYQSYPKGKYAEMAEYYVGQSLYMSTP 120 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG-- 204 + DQ T + ++ Y ++ + A+ + +++L KE+ R Y G Sbjct: 121 EPRLDQSQTISAIAAFQEYLDIYPDAKMKQMAQQRLFDLQDKLVKKELYSARLYYDLGSY 180 Query: 205 ---------EYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYV---------ALALMDE 245 Y A I Q L +Y + E+ ++ + Y L + Sbjct: 181 FNNCSYGGNNYEACIITAQNALKDYPFTKLREDFSVLIMKSKYELAAQSVDEKKLERYQD 240 Query: 246 AREVVSLIQERYPQGYWARYVET 268 A + YP + E Sbjct: 241 AEDECYGFINEYPDSKYKETAER 263 >gi|124006428|ref|ZP_01691262.1| conserved hypothetical protein [Microscilla marina ATCC 23134] gi|123988085|gb|EAY27756.1| conserved hypothetical protein [Microscilla marina ATCC 23134] Length = 245 Score = 86.7 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 82/222 (36%), Gaps = 10/222 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E Y A+ + +++F +A + + + L A+ Y + Q AA Sbjct: 7 EEKYNGAISYYDKKDFYRAGLLLEELIPLIKGQKRSEIANLYYAYCHYYQRQRQLAAYYF 66 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + + T + SK V+ Y+ S + + DQ T + + R+ S Y + Sbjct: 67 KRFYTNFGASKYVEEAMYMYAFSLYKDSPEAYLDQSNTDQAIVASQNFLNRFPQSKYREE 126 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 ++ R +L K E + Y + Y AA+ F ++ D+ + EE + + Sbjct: 127 CSRIISELRKKLETKAYENAKLYYRIRNYRAAVITFTNFQKDFPDSHYNEEVAYLKILSQ 186 Query: 238 VALA----LMDEAREVVSLIQE------RYPQGYWARYVETL 269 A L + +I+ YP ++R E L Sbjct: 187 YEFAQVSTLRRQQERFQGVIKYYTEFIDAYPGSGYSRSAERL 228 >gi|332829535|gb|EGK02184.1| hypothetical protein HMPREF9455_01818 [Dysgonomonas gadei ATCC BAA-286] Length = 283 Score = 84.8 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 65/185 (35%), Gaps = 5/185 (2%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A + E+ + + ++ + + ++ L + A + Y A Y Sbjct: 34 YTYAKKYFDEKKYGRTTTLLDEILSTYTGSSKEQEILFLMAQAYFYDKDYTTATQYYTRY 93 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 ++P+ + + D DQ +T +Q +E + S A+ Sbjct: 94 YNKFPKGDYTELARFNAAYGLYLDSPDARLDQTSTIRGIQEFQNFLEYFPQSEKAPEAQD 153 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG-----EYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + + +L+ KE R Y G Y + I + L NY +E +EE +V Sbjct: 154 LMFKLQEKLSYKEFLAARLYFNLGLYMGNNYESCIVTSREALKNYPFSEFSEEFQILIVR 213 Query: 236 AYVAL 240 + L Sbjct: 214 SRYEL 218 >gi|218779658|ref|YP_002430976.1| hypothetical protein Dalk_1811 [Desulfatibacillum alkenivorans AK-01] gi|218761042|gb|ACL03508.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans AK-01] Length = 1059 Score = 84.8 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 79/229 (34%), Gaps = 25/229 (10%) Query: 45 DVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + L+ D E+ Y + ++++ + +A + FN+ +FP R + A Sbjct: 850 ESALEKYPDSPRAPEIRYHIGLCKMEQKRYGQARQAFNRTVEEFPGTVWGRLAAYHHAMS 909 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y G+Y+ A + ++ PE +Y G+ Q + Sbjct: 910 LYREGRYKDAQESLDRLLSMAPERGLAAEAFYHRGLCLML--------QGNNQEARLDFR 961 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-IGRYYLKRGEYVAAIPRFQLVLANYSD 222 + ERY + A + A + G + ++ +L Y Sbjct: 962 IVRERY------EDALW---------AEHALYQTGLSFFNEQDFDNMAASMTELLRQYPQ 1006 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 A EA L A++ L L +AR + + ER P WA +K Sbjct: 1007 TALAPEAWYHLGLAHMKLNLPGKARLDFTNVVERSPDSPWANQARDRLK 1055 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 9/149 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 + Q S D L + E Y + + + + N +A F + A A +L Sbjct: 918 DAQESLDRLLSMAPERGLAAEAFYHRGLCLMLQGNNQEARLDFRIVRERYEDALWAEHAL 977 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + ++ + A+ E + QYP++ +Y +G+++ ++ Sbjct: 978 YQTGLSFFNEQDFDNMAASMTELLRQYPQTALAPEAWYHLGLAHMKL--------NLPGK 1029 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + +VER +SP+ AR + Sbjct: 1030 ARLDFTNVVERSPDSPWANQARDRLKELN 1058 >gi|32491283|ref|NP_871537.1| hypothetical protein WGLp534 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166490|dbj|BAC24680.1| yfiO [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 226 Score = 84.8 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 65/149 (43%), Gaps = 15/149 (10%) Query: 99 MSAFVQYSAGKYQQAASLG-----EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY--- 150 + Y+ Y+ + +++I P +D++ Y+ G+ + ++ Sbjct: 75 NIINLYYTYKDYEIENNSILEEIIDQFIESNPRCPYIDFLIYIQGLINMDLDKNTINFFI 134 Query: 151 -------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 + + L L +++ +Y NS + K ++ Y+ ++A E++I ++Y K+ Sbjct: 135 YKKKFIENTKYAYLALNNFKKLIYKYPNSDFYKSSKNYIFHLNERIAFHELQIIKFYFKK 194 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 Y A+ R ++ + + + ++E++ Sbjct: 195 HAYSASNFRILEMINKFPNTKSSKESLIY 223 >gi|317051988|ref|YP_004113104.1| outer membrane assembly lipoprotein YfiO [Desulfurispirillum indicum S5] gi|316947072|gb|ADU66548.1| outer membrane assembly lipoprotein YfiO [Desulfurispirillum indicum S5] Length = 210 Score = 84.4 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 62/192 (32%), Gaps = 11/192 (5%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G +++ D D E A + + +A + + + + Sbjct: 16 AGCAKKADPDRVPDL-----------ETAHRLAERGQYDEARQEYRGVMNLADNSEAVAR 64 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 +L A G++ A+ E Y+ ++P+ D + Y + IR + D Sbjct: 65 IMLYIAHTYEKEGEWLDASIEYEHYLLRFPDHSAADDTMIRLMEMYMEQIRTIDRDVNPA 124 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + R Y +SP + +A E I +YL+ + AA R + Sbjct: 125 RKAYSLAHRFYREYQSSPRTGEVQVMEQQAFEIIAEHEAYILDFYLRTKKITAAKTRLER 184 Query: 216 VLANYSDAEHAE 227 + + D Sbjct: 185 IERDDPDFFATP 196 >gi|213586732|ref|ZP_03368558.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 62 Score = 84.0 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 21/52 (40%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 L + Y A + + ++ P N+DYV Y+ G++ + V Sbjct: 1 QLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRGLTNMALDDSV 52 >gi|973202|gb|AAC13872.1| unknown [Dichelobacter nodosus] Length = 106 Score = 84.0 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 37/74 (50%) Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 N L ++EI +YL++G++VAA R + +L +Y A A+A ++ AY L A Sbjct: 1 NLLGKHDLEIADFYLRKGDFVAAAARAKNILEHYETTPSAPYALAIMIRAYRELGQKLLA 60 Query: 247 REVVSLIQERYPQG 260 + + + Y Sbjct: 61 DDAMRVFNMNYVDS 74 >gi|193214935|ref|YP_001996134.1| putative lipoprotein [Chloroherpeton thalassium ATCC 35110] gi|193088412|gb|ACF13687.1| putative lipoprotein [Chloroherpeton thalassium ATCC 35110] Length = 319 Score = 84.0 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 82/247 (33%), Gaps = 52/247 (21%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A+ FFS+ C V + ++ A + +++ A + Sbjct: 28 AILGFFSLTACSSVA-------------PPVSEAPADQFDYAKRLYEAEDYQDAIMELQR 74 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 S + + + A Y + +Y A + + P +K VY+ + M Y Sbjct: 75 ISYNIRATELEDDVMFYLAQSYYKSEQYLLAVDTFKRLVRNTPGTKFARVVYFQIAMCYY 134 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYT-----------------------NSPY----- 174 + +DQ+ T+L +Q ++ Y N Y Sbjct: 135 NLSMPYQFDQQYTQLTIQQFQIYIDGYPAADSASIAAQIAELNNYADREKDNPEYQKLLG 194 Query: 175 -----------VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 ++ A + R +LA K E Y++ Y +A F V+ YSD+ Sbjct: 195 KLKAQYGLYDTLRIAEEKIRESREKLARKTFESAEQYIQLRAYKSAEVYFDEVILGYSDS 254 Query: 224 EHAEEAM 230 + E+A+ Sbjct: 255 PYYEKAL 261 Score = 35.9 bits (82), Expect = 6.8, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 33/72 (45%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + R+ +E A +++ + + A YF++ + + K+LL VQ + K+ Sbjct: 218 EKLARKTFESAEQYIQLRAYKSAEVYFDEVILGYSDSPYYEKALLGKIDVQMTRKKWSDV 277 Query: 114 ASLGEEYITQYP 125 E+Y ++P Sbjct: 278 LDTIEKYKARFP 289 >gi|332882355|ref|ZP_08449983.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679739|gb|EGJ52708.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 289 Score = 83.6 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 98/281 (34%), Gaps = 32/281 (11%) Query: 12 FEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71 F Y + + IF ++ L+ +V + D + YE A + + Sbjct: 6 FAVQLYNMKR----IFLWLSGAMLLLASCNQYNNVMKTADYDYK-----YEAAKEYFVKG 56 Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 +S++ + + L M A ++ G + A S ++Y YP+ V+ Sbjct: 57 QYSRSSVLLGELVTLMKGTSRGEECLYMLAMSEFCDGNFDVAHSYFKKYYQSYPKGVYVE 116 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Y + G S + + D DQ +T ++ ++ Y + + + ++++ Sbjct: 117 YARFYAGRSLYESVPDTRLDQSSTMAAVKEFQDFLDYYPYTHLKDRTQEMIFALQDKMVE 176 Query: 192 KEVEIGRYYLKRG-----------EYVAAIPRFQLVLANYS-DAEHAEEAMARLV-EAYV 238 KE E + Y G Y A I + L +Y + E + ++ A Sbjct: 177 KEFEAAKLYYDLGSYMGNCSYGGSNYEACIVTARNALLDYPYASPERREEFSIMILRAKY 236 Query: 239 ALALMDEAREVVSLIQE----------RYPQGYWARYVETL 269 LA + + ++ YP+ + + + + Sbjct: 237 QLAQQSVEEKRLERYRDTIDEYYGFMNEYPESKYLKDAQRI 277 >gi|319790450|ref|YP_004152083.1| tol-pal system protein YbgF [Thermovibrio ammonificans HB-1] gi|317114952|gb|ADU97442.1| tol-pal system protein YbgF [Thermovibrio ammonificans HB-1] Length = 233 Score = 83.6 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 62/158 (39%), Gaps = 13/158 (8%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 S++ SS+ + +++Y +A ++ NF KA + F Q + + Sbjct: 87 ISVSSAPSAPVGGSSSKQTVV-----QFGAKDLYRQAFDAMEAGNFDKAQQLFEQLVQQY 141 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 P + +A +L + YS YQ AA+ ++ I +YP V + + Y Sbjct: 142 PDSDLADNALYWIGEIYYSHNDYQTAANYFQQVIDKYPNGNKVPAAMLKLALCY------ 195 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 T+ + + ++++Y +P A+ + Sbjct: 196 --RGMGNTQKAKEILKEVIDKYPGTPEASIAKVKLMEL 231 Score = 69.4 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 Q ++V++Y +S A ++ IG Y +Y A Sbjct: 125 GNFDKAQQLFEQLVQQYPDSDLADNALYW--------------IGEIYYSHNDYQTAANY 170 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 FQ V+ Y + AM +L Y + +A+E++ + ++YP A + Sbjct: 171 FQQVIDKYPNGNKVPAAMLKLALCYRGMGNTQKAKEILKEVIDKYPGTPEASIAK 225 >gi|254448664|ref|ZP_05062122.1| TPR repeat protein [gamma proteobacterium HTCC5015] gi|198261672|gb|EDY85959.1| TPR repeat protein [gamma proteobacterium HTCC5015] Length = 277 Score = 83.6 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 62/153 (40%), Gaps = 8/153 (5%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G S + +D +R+ Y+ A +L+E +A + F ++P A Sbjct: 131 TGNSTTPSDTAEKTAPSDPAAERKAYQAAFDYLREGRHQEAIKAFEGVLNEYPDGQFADN 190 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + A Y + ++ +A + ++ I YP S V + +G +Y ++ + Sbjct: 191 AQYWKAESHYVSKQFAEAEAGFKKVIEAYPNSNKVPDAHLKLGYTYYEL--------KQW 242 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + ++++VE Y S AR + + + Sbjct: 243 EQSRKILAQVVENYPTSNAANLARKRLALLSQR 275 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 49/151 (32%), Gaps = 22/151 (14%) Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + P A + +AF G++Q+A E + +YP+ + D Y S+ Sbjct: 142 EKTAPSDPAAERKAYQAAFDYLREGRHQEAIKAFEGVLNEYPDGQFADNAQYWKAESHYV 201 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 + +++E Y NS V A + Y + Sbjct: 202 S--------KQFAEAEAGFKKVIEAYPNSNKVPDAHLKLGYT--------------YYEL 239 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 ++ + V+ NY + A A RL Sbjct: 240 KQWEQSRKILAQVVENYPTSNAANLARKRLA 270 Score = 52.0 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 44/120 (36%), Gaps = 15/120 (12%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D + R + ++ ++ Y + + A+++ Sbjct: 156 YQAAFDYLREGRH-QEAIKAFEGVLNEYPDGQFADNAQYWKAESH--------------Y 200 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 ++ A F+ V+ Y ++ +A +L Y L +++R++++ + E YP Sbjct: 201 VSKQFAEAEAGFKKVIEAYPNSNKVPDAHLKLGYTYYELKQWEQSRKILAQVVENYPTSN 260 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 1/79 (1%) Query: 190 AAKEVEIGRY-YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 A ++ + YL+ G + AI F+ VL Y D + A+ A E++ EA Sbjct: 151 AERKAYQAAFDYLREGRHQEAIKAFEGVLNEYPDGQFADNAQYWKAESHYVSKQFAEAEA 210 Query: 249 VVSLIQERYPQGYWARYVE 267 + E YP Sbjct: 211 GFKKVIEAYPNSNKVPDAH 229 >gi|330996269|ref|ZP_08320154.1| outer membrane assembly lipoprotein YfiO [Paraprevotella xylaniphila YIT 11841] gi|329573461|gb|EGG55068.1| outer membrane assembly lipoprotein YfiO [Paraprevotella xylaniphila YIT 11841] Length = 289 Score = 82.9 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 99/281 (35%), Gaps = 32/281 (11%) Query: 12 FEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71 F Y + + IF ++ L+ +V + D + YE A + + Sbjct: 6 FAVQLYNMKR----IFLWLSGAMLLLASCNQYNNVMKTADYDYK-----YEAAKEYFVKG 56 Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 +S++ + + L M A ++ G + A S ++Y YP+ V+ Sbjct: 57 QYSRSSVLLGELVTLMKGTSRGEECLYMLAMSEFCDGNFDVAHSYFKKYYQSYPKGVYVE 116 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Y + G + + + D DQ +T ++ ++ Y + + + ++++ Sbjct: 117 YARFYAGRALYESVPDTRLDQSSTMAAVKEFQDFLDYYPYTSLKDRTQEMIFALQDKMVE 176 Query: 192 KEVEIGRYYLKRG-----------EYVAAIPRFQLVLANYS-DAEHAEEAMARLV-EAYV 238 KE + + Y G Y A I + L +Y + E + ++ A Sbjct: 177 KEFQAAKLYYDLGSYMYNCSYGGSNYEACIVTARNALLDYPYASPERREEFSIMILRAKY 236 Query: 239 ALALMDEAREVVSLIQE----------RYPQGYWARYVETL 269 LAL + + ++ YP+ + + + + Sbjct: 237 QLALQSVEEKRLDRYRDTIDEYYGFMNEYPESKYLKDAQRI 277 >gi|109946693|ref|YP_663921.1| competence lipoprotein [Helicobacter acinonychis str. Sheeba] gi|109713914|emb|CAJ98922.1| competence lipoprotein [Helicobacter acinonychis str. Sheeba] Length = 217 Score = 82.5 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 73/201 (36%), Gaps = 11/201 (5%) Query: 19 LYKFALTIFFSIAVCFLV-GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + F +F +AV + G + +D Y Y+ + + N A Sbjct: 1 MKHFKTFLFIIMAVIVVSTGCTNKKKKDEYNKPAIFW------YQGILREILFGNLETAD 54 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 Y++ + + + +++L +Y A+ +EYI ++ NVDY+ +L Sbjct: 55 NYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTEDNVDYLTFLK 114 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195 S+ ++ DQ + + +E+Y NS Y + + L E+ Sbjct: 115 LQSHYYAFKNHSKDQEFISNSIVNLGEFIEKYPNSRYRPYVEYM--QVKFILGQNELNRA 172 Query: 196 IGRYYLKRGEYVAAIPRFQLV 216 I Y KR + + V Sbjct: 173 IANVYRKRHKPEGVKRYLERV 193 >gi|302342342|ref|YP_003806871.1| hypothetical protein Deba_0907 [Desulfarculus baarsii DSM 2075] gi|301638955|gb|ADK84277.1| Tetratricopeptide TPR_2 repeat protein [Desulfarculus baarsii DSM 2075] Length = 1085 Score = 82.5 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 87/212 (41%), Gaps = 34/212 (16%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS- 115 + + L+E+++++A F + FP +++ A Y + + AA Sbjct: 448 ADALLSRGRSALEERDYNQALLAFQELMDRFPKDQAVGEAMFRFADAFYYENERKMAAKF 507 Query: 116 -----LGEEYITQYPESKNVDYVYYLVG---MSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 + I +P+S V + ++G M++ + R + Y ++ Sbjct: 508 HDVMFNYQRAIDLHPQSDQVPWALLMMGKASMAFGEPFRGMG-----------YFEIVIN 556 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SPYV A N+ G + ++G++ A+ ++ VLA+Y +++ Sbjct: 557 DYPKSPYVPLA------LVNR--------GGAFQEQGKFAMAVAEYERVLASYPQSDYRV 602 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +A L +AY +A A +V+ + + PQ Sbjct: 603 DAQWGLAKAYFGMARFRAASDVLLEMAKENPQ 634 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 37/288 (12%), Positives = 89/288 (30%), Gaps = 70/288 (24%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRY-QREVYEKAVLFLKEQNFSKAYEYFN 81 AL + ++ F + ++ ++ Y + + F ++ F+ A + Sbjct: 530 ALLMMGKASMAFGEPFRGMGYFEIVINDYPKSPYVPLALVNRGGAFQEQGKFAMAVAEYE 589 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMS 140 + +P + + A + +++ A+ + E + P+ + Y +G + Sbjct: 590 RVLASYPQSDYRVDAQWGLAKAYFGMARFRAASDVLLEMAKENPQMHLQNPELLYYLGEA 649 Query: 141 YAQM---------------IRDVPYD--------------QRATKLMLQYMSRIVERYTN 171 Q+ IR D Q + + +++++ Y + Sbjct: 650 EFQLRDYNKARFYFLWALNIRPDMRDGDIILTRVGDSYGYQGQDRAAREIYAQVIDMYPD 709 Query: 172 SP-----------------------------------YVKGARFYVTVGRNQLAAKEVEI 196 + Y + A Y QLA ++ + Sbjct: 710 TDGALVARIRLAESPEKDIEHPWDIFQVKADLDAYRTYKEIADKYADRQVGQLAKVKLAV 769 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 Y+ K+ E+V AI + L + E + A A+ L++ Sbjct: 770 --YHYKKNEFVKAIDTLEKFLQLNPNTPFRPEVDYTMNLA--AIGLLE 813 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 61/199 (30%), Gaps = 23/199 (11%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + + YF D+P + +L+ GK+ A + E + Sbjct: 535 GKASMAFGEPFRGMGYFEIVINDYPKSPYVPLALVNRGGAFQEQGKFAMAVAEYERVLAS 594 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-SPYVKGARFYV 182 YP+S + + +Y M R + + + + +Y+ Sbjct: 595 YPQSDYRVDAQWGLAKAYFGMAR--------FRAASDVLLEMAKENPQMHLQNPELLYYL 646 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 QL ++ R+Y F L D + + R+ ++Y Sbjct: 647 GEAEFQL--RDYNKARFY------------FLWALNIRPDMRDGDIILTRVGDSYGYQGQ 692 Query: 243 MDEAREVVSLIQERYPQGY 261 ARE+ + + + YP Sbjct: 693 DRAAREIYAQVIDMYPDTD 711 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 42/99 (42%), Gaps = 1/99 (1%) Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 AY + + + + V + + + A Y ++ +A E+++ P + V Sbjct: 742 DAYRTYKEIADKYADRQVGQLAKVKLAVYHYKKNEFVKAIDTLEKFLQLNPNTPFRPEVD 801 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMS-RIVERYTNS 172 Y + ++ ++ + + + +LM Y+ R++ NS Sbjct: 802 YTMNLAAIGLLEGLRAENKPMELMDAYLRNRVLLTRPNS 840 >gi|256421366|ref|YP_003122019.1| hypothetical protein Cpin_2327 [Chitinophaga pinensis DSM 2588] gi|256036274|gb|ACU59818.1| TPR repeat-containing protein [Chitinophaga pinensis DSM 2588] Length = 1023 Score = 82.1 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 49/228 (21%), Positives = 84/228 (36%), Gaps = 30/228 (13%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFV 103 + S + Q Y LK +++++A ++F R A + + L SA Sbjct: 510 VPSSGEANAQTASYNMGYALLKAEDYTRALQHFEAAQRT--TGPNAARITTDAALRSADC 567 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y Y +A +L E+ I DY Y +I + Q T + + Sbjct: 568 YYMLKDYPKAMALYEKIIANNQ--PGSDYATYQK-----SIILGI---QGKTNEKVALLK 617 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 ++ ++ +S + A ++EI YL +Y AIP + VL + Sbjct: 618 QLGNKFPSSGFGNDA--------------DLEIANTYLAEEKYNEAIPYLENVLQKQPNG 663 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 +A A+ +L Y D+A + E+YP A T VK Sbjct: 664 PNAPRALLKLGLCYFNKDNDDKALSYYRQVIEKYPNSPEANAALTAVK 711 Score = 35.5 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 67/211 (31%), Gaps = 43/211 (20%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A + + +A + + + + ++ A+ ++ +Q+A Sbjct: 122 YQLAKYYFHQNKLKEAIPLYEKANIENLSNAEIAEAKFELAYCYFNVKDFQKAQ------ 175 Query: 121 ITQYPESKNVDYV---YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 P ++ V YY+ Y I L R+V Y Sbjct: 176 ----PLFGSIKEVQGKYYMSANYYYGFIAYYNR---QYNEALTSFQRVVN---EPKYSAI 225 Query: 178 ARFYVTVG------RNQL----------------AAKEVEIGRYYLKRGEYVAAIPRFQL 215 +Y+ ++QL A + +G+ Y +R EY A+P Q Sbjct: 226 VPYYIAEIYYFQNKKDQLISYGEPLVKKGGLYYEAELKQLLGQTYFERKEYQKALPYLQE 285 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEA 246 N + +E + +L +Y +A Sbjct: 286 FNDNADEVR--KEDIYQLSYSYYQTGNFSKA 314 >gi|281358385|ref|ZP_06244867.1| DNA uptake lipoprotein-like protein [Victivallis vadensis ATCC BAA-548] gi|281315212|gb|EFA99243.1| DNA uptake lipoprotein-like protein [Victivallis vadensis ATCC BAA-548] Length = 359 Score = 81.7 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 67/162 (41%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 K+ E F + PFA A ++ L A++ GK +++ I +P++K Y Sbjct: 135 DKSIEVFEKALDRAPFAESAPEARLRLAYLFDQKGKVKESLEQLRIIIRDFPDAKACRYA 194 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Y + ++ R D + + +E+Y ++P + + R+ A + Sbjct: 195 YLALANGLYELSRRGDGDGAYNRESYELFKTFLEKYPDAPEAPWVKVRMVRSRDIQAGRL 254 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 E+ YY + G A+ VL +Y D A+ + LV+ Sbjct: 255 YELAEYYERAGRKEASERYLAQVLKDYPDTTSADASERLLVK 296 >gi|257461254|ref|ZP_05626351.1| competence lipoprotein [Campylobacter gracilis RM3268] gi|257441282|gb|EEV16428.1| competence lipoprotein [Campylobacter gracilis RM3268] Length = 215 Score = 81.3 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 70/193 (36%), Gaps = 10/193 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + + F+ G + +++ S Y K + + + A + Sbjct: 1 MTNLSKILSALLFIAFIGGCSGKGDGELFNLSPEAW------YSKILEDINNASMEDAEK 54 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 ++ S + + + + L+ A+ Y++A +EYI Y ++ ++Y +L Sbjct: 55 HYTSFSSEHIASPLLEEMTLIMAWAFVEDENYEKANKYLDEYIRLYGTTQKIEYARFLKI 114 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--I 196 + +Q+ + + + + Y S Y +T R LA ++ I Sbjct: 115 RANFDSFSRPNRNQKLMLNSIDEIRKFIAEYPQSEYRPLLETMLTKLR--LAEHQLNIDI 172 Query: 197 GRYYLKRGEYVAA 209 Y + +A Sbjct: 173 KDLYQRTDRESSA 185 >gi|325295382|ref|YP_004281896.1| tol-pal system protein YbgF [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065830|gb|ADY73837.1| tol-pal system protein YbgF [Desulfurobacterium thermolithotrophum DSM 11699] Length = 242 Score = 81.3 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 53/130 (40%), Gaps = 8/130 (6%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 +++Y++A ++ + A F + +P + +A +L + YS Y+ AA+ Sbjct: 119 SDKDLYKQAFNSMEAGDLETAKSTFEKLVEQYPDSPLADNALYWIGEIYYSHNDYETAAN 178 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 ++ I +YP V + +SY M + +++E+Y N+P Sbjct: 179 YFKQVIEKYPNGNKVPAAMLKLALSYKGM--------GELDKAKEMFQQVIEKYPNTPEA 230 Query: 176 KGARFYVTVG 185 A+ + Sbjct: 231 GIAKAKLMEI 240 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + ++VE+Y +SP A ++ IG Y +Y A Sbjct: 134 GDLETAKSTFEKLVEQYPDSPLADNALYW--------------IGEIYYSHNDYETAANY 179 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 F+ V+ Y + AM +L +Y + +D+A+E+ + E+YP Sbjct: 180 FKQVIEKYPNGNKVPAAMLKLALSYKGMGELDKAKEMFQQVIEKYPNTP 228 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 34/147 (23%), Positives = 53/147 (36%), Gaps = 30/147 (20%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + K L AF AG + A S E+ + QYP+S D Y +G Y Sbjct: 119 SDKDLYKQAFNSMEAGDLETAKSTFEKLVEQYPDSPLADNALYWIGEIYYS--------H 170 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA----KEVEIGRYYLKRGEYVA 208 + Y +++E+Y N V A + + + KE+ Sbjct: 171 NDYETAANYFKQVIEKYPNGNKVPAAMLKLALSYKGMGELDKAKEM-------------- 216 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVE 235 FQ V+ Y + A A A+L+E Sbjct: 217 ----FQQVIEKYPNTPEAGIAKAKLME 239 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 1/91 (1%) Query: 41 QSSRDVYLDSVTDVRYQR-EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 +S+ + ++ D +Y ++ ++ A YF Q +P ++L Sbjct: 140 KSTFEKLVEQYPDSPLADNALYWIGEIYYSHNDYETAANYFKQVIEKYPNGNKVPAAMLK 199 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 A G+ +A + ++ I +YP + Sbjct: 200 LALSYKGMGELDKAKEMFQQVIEKYPNTPEA 230 >gi|312129473|ref|YP_003996813.1| outer membrane assembly lipoprotein yfio [Leadbetterella byssophila DSM 17132] gi|311906019|gb|ADQ16460.1| outer membrane assembly lipoprotein YfiO [Leadbetterella byssophila DSM 17132] Length = 296 Score = 80.9 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 94/260 (36%), Gaps = 24/260 (9%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 + + R+ SR V E Y AV + K+ ++ KA F + + Sbjct: 8 LLVLSVLIFSCSREFSR------VQKKGTTEEKYAAAVKYYKKADYYKASVLFEEIAPLL 61 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 A ++ +A+ Y G YQ ++ L + Y S + YY+ S + Sbjct: 62 KGDSTAERTQFYNAYANYYLGNYQMSSYLFNTFYATYNNSPFAEEAYYMYAYSMYKDTPP 121 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--- 204 DQ T + + + Y +S Y + R +L K E + Y K Sbjct: 122 YNLDQTNTLTAIDALQTFINSYPDSKYADDCAKNLQDLRERLERKSYEKAKQYFKTRDPS 181 Query: 205 -----EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----------MDEAREV 249 Y+A++ ++ D+++ EE A + A LA ++A E Sbjct: 182 WGGLSNYLASVVTIDNFKKDFPDSKYNEELSAMQITAQYELADLSLFNKQKERYNQAIEY 241 Query: 250 VSLIQERYPQGYWARYVETL 269 + ++YP + + +E L Sbjct: 242 YNKFIDKYPNSKYLKDLEKL 261 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 71/226 (31%), Gaps = 26/226 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG---- 108 D +R + A N+ + FN + + A ++ M A+ Y Sbjct: 64 DSTAERTQFYNAYANYYLGNYQMSSYLFNTFYATYNNSPFAEEAYYMYAYSMYKDTPPYN 123 Query: 109 ----KYQQAASLGEEYITQYPESKNVDYVY--------------YLVGMSYAQMIRDVPY 150 A + +I YP+SK D Y Y + Sbjct: 124 LDQTNTLTAIDALQTFINSYPDSKYADDCAKNLQDLRERLERKSYEKAKQYFKTRDPSWG 183 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 + + + + +S Y + + +LA + + ++ Y AI Sbjct: 184 GLSNYLASVVTIDNFKKDFPDSKYNEELSAMQITAQYELADLSL----FNKQKERYNQAI 239 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 + + Y ++++ ++ ++ L + E + + ++++ Sbjct: 240 EYYNKFIDKYPNSKYLKDLEKLYDKSLKGLQKVAEIEKQIEEMKKQ 285 >gi|32266343|ref|NP_860375.1| hypothetical protein HH0844 [Helicobacter hepaticus ATCC 51449] gi|32262393|gb|AAP77441.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 213 Score = 80.5 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 62/150 (41%), Gaps = 4/150 (2%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE + + N A YF+ + + + +++L+ +Y AA +EY Sbjct: 34 YESIIKEINFGNLEGADGYFSSLQSEHINSPLIPEAMLILGQAHMEKDEYLLAAFYFDEY 93 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +Y +N DYV YL ++ ++ DQ ++ ++ Y +S Y + Sbjct: 94 LKRYSSLENQDYVRYLKILTNFYGFKNYSKDQEFITQSIEDTKSFLQMYPHSRYAPYVEY 153 Query: 181 YVTVGRNQLAAKEVE--IGRYYLKRGEYVA 208 + QL E+ I R Y K+G+ A Sbjct: 154 --IDLKFQLGQIELNRSIARVYQKQGKTQA 181 >gi|53804446|ref|YP_113695.1| hypothetical protein MCA1231 [Methylococcus capsulatus str. Bath] gi|53758207|gb|AAU92498.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath] Length = 285 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 53/144 (36%), Gaps = 8/144 (5%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 SR V +D + Y++A LK+ F++A + F + +P A Sbjct: 146 SRPVAPPPASDGAAREAAYQRAFGTLKDGRFAEAIKEFKSFTARYPSGDYADNGQYWLGE 205 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y + A ++ I +P+S V L ++Y + D Q + Sbjct: 206 AHYVNRDFSSAKEAFQKLIKNFPQSAKVPDAA-LK-LAY------IESDTGQIASARQML 257 Query: 163 SRIVERYTNSPYVKGARFYVTVGR 186 + +++RY S K A + + Sbjct: 258 NDVIKRYPGSSAAKQAEKRLQKMQ 281 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 51/143 (35%), Gaps = 22/143 (15%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 AR++ AF G++ +A + + +YP D Y +G ++ V D Sbjct: 159 AREAAYQRAFGTLKDGRFAEAIKEFKSFTARYPSGDYADNGQYWLGEAHY-----VNRDF 213 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + K ++++ + S V A + + G+ +A Sbjct: 214 SSAKEA---FQKLIKNFPQSAKVPDAALKLAYIES--------------DTGQIASARQM 256 Query: 213 FQLVLANYSDAEHAEEAMARLVE 235 V+ Y + A++A RL + Sbjct: 257 LNDVIKRYPGSSAAKQAEKRLQK 279 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D R ++ RY + Y ++++ Y+ Sbjct: 164 YQRAFGTLKDGRFA-EAIKEFKSFTARYPSGDYADNGQYWLGEAH-------------YV 209 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 R + +A FQ ++ N+ + +A +L + AR++++ + +RYP Sbjct: 210 NRD-FSSAKEAFQKLIKNFPQSAKVPDAALKLAYIESDTGQIASARQMLNDVIKRYPGSS 268 Query: 262 WARYVETLVK 271 A+ E ++ Sbjct: 269 AAKQAEKRLQ 278 >gi|194337847|ref|YP_002019641.1| putative lipoprotein [Pelodictyon phaeoclathratiforme BU-1] gi|194310324|gb|ACF45024.1| putative lipoprotein [Pelodictyon phaeoclathratiforme BU-1] Length = 298 Score = 79.8 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 89/280 (31%), Gaps = 48/280 (17%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 + + +A L+ SS+ + + T V E Y KAV ++++ A Sbjct: 7 ISRSALMLLATGLLMSSGCSSSKPAKISATTRV---NEAYGKAVKMYDKRDYQGAALGLE 63 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV---YYLVG 138 + L + A Y +G+Y A E + + + Y +++ Sbjct: 64 SLLFTSRATALEDDVLFLLAQSYYHSGQYLLA---AEMFTKLQQQISSTPYARTAQFMLA 120 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYT---NSPYVKG------------------ 177 SY Q+ DQ T + + ++ Y +S Sbjct: 121 KSYEQLSPHFELDQEHTAKAITQFATYLDLYPMVDSSKIASDVTTYRELLKINPDNASYK 180 Query: 178 ------------------ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 A + V R +LA I R Y++ +Y AA + ++ Sbjct: 181 QSYATATTQFARIDTLRYAEKAIPVLREKLAKNTFFIARQYVQLKKYKAAGIFYDELIKR 240 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y D + + A ++ + +A + + + +P Sbjct: 241 YPDTVYIKPAWEGKIDVLMKRKKWFDASQALDQYLQNFPD 280 >gi|254469021|ref|ZP_05082427.1| hypothetical protein KB13_1247 [beta proteobacterium KB13] gi|207087831|gb|EDZ65114.1| hypothetical protein KB13_1247 [beta proteobacterium KB13] Length = 320 Score = 79.4 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 60/142 (42%), Gaps = 8/142 (5%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 L + D ++ ++ A + + +A+E F++ +P + A ++ ++ Sbjct: 182 ESDNLPPLIDEEQEQNMFSDAEGLMTSTKYKEAFELFDRFVTAYPNSQRAVEAKKNIGYI 241 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Q++ Y+ + S ++ I +P+ + + + Y + Q+ R Q + Sbjct: 242 QFALKNYKASLSTYDKLIANHPDHELMPEILYGKANTEIQLTR--------ITKAKQTLR 293 Query: 164 RIVERYTNSPYVKGARFYVTVG 185 RI++ Y N+ ++ A+ + Sbjct: 294 RIIKEYPNASIIESAKKRLKAL 315 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 41/116 (35%), Gaps = 14/116 (12%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 K + R V Y NS A+ + + L Y A++ + Sbjct: 212 KEAFELFDRFVTAYPNSQRAVEAKKNIGYIQFAL--------------KNYKASLSTYDK 257 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++AN+ D E E + + L + +A++ + I + YP + +K Sbjct: 258 LIANHPDHELMPEILYGKANTEIQLTRITKAKQTLRRIIKEYPNASIIESAKKRLK 313 >gi|157164633|ref|YP_001467200.1| tRNA (guanine-N(1)-)-methyltransferase [Campylobacter concisus 13826] gi|112801444|gb|EAT98788.1| putative lipoprotein [Campylobacter concisus 13826] Length = 215 Score = 79.4 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 73/192 (38%), Gaps = 8/192 (4%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + +F+ + + G + + L E Y + + +K+ + A + Sbjct: 1 MKRFSKFLAVVALLGLFSGCAEKYTELYNL-------TPDEWYAQVIADIKDGDLESADK 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES-KNVDYVYYLV 137 ++ + + + + + LL+ A + +Y A +EYI +Y ++ ++ YL Sbjct: 54 HYVSMASEHVASPLLEQILLILAQAHANDEEYLMANHYLDEYIKRYGDNGPKTEFAQYLK 113 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + +Q+ + + + + + Y N+ Y + + L +++I Sbjct: 114 IKANFDSFTQPNRNQKLMEDSVTEIEKFLYMYPNTEYKPLIETMLIKFKLALYFLDMQIA 173 Query: 198 RYYLKRGEYVAA 209 Y + G V+A Sbjct: 174 DLYKRTGRDVSA 185 >gi|114330318|ref|YP_746540.1| TPR repeat-containing protein [Nitrosomonas eutropha C91] gi|114307332|gb|ABI58575.1| Tetratricopeptide TPR_2 repeat protein [Nitrosomonas eutropha C91] Length = 273 Score = 79.4 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 22/140 (15%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 +++ +A+ + G Y + + E +++++P+S Y +G ++ M R Sbjct: 152 QRNRYDAAYALFKDGDYSGSIASFESFLSRHPQSALAPAAAYWIGNAHYAM--------R 203 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 + R++E Y +SP V + A+ +VEIG+ AA Sbjct: 204 NFDKAIAAQQRLIETYPDSPKVPDGLLNM-------ASSQVEIGQ-----KA--AARKTL 249 Query: 214 QLVLANYSDAEHAEEAMARL 233 ++ NY E AE+A RL Sbjct: 250 VNLITNYPGTEAAEKAKRRL 269 Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 8/126 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A K+ ++S + F P + +A + Y+ + +A + + Sbjct: 156 YDAAYALFKDGDYSGSIASFESFLSRHPQSALAPAAAYWIGNAHYAMRNFDKAIAAQQRL 215 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I YP+S V G+ + V Q+A + + ++ Y + + A+ Sbjct: 216 IETYPDSPKVPD-----GLLNMASSQ-VEIGQKAA--ARKTLVNLITNYPGTEAAEKAKR 267 Query: 181 YVTVGR 186 + + Sbjct: 268 RLGSLK 273 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 35/111 (31%), Gaps = 14/111 (12%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + + R+ S A ++ IG + + AI Q ++ Sbjct: 171 SIASFESFLSRHPQSALAPAAAYW--------------IGNAHYAMRNFDKAIAAQQRLI 216 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 Y D+ + + + + V + AR+ + + YP A + Sbjct: 217 ETYPDSPKVPDGLLNMASSQVEIGQKAAARKTLVNLITNYPGTEAAEKAKR 267 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 26/61 (42%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 K G+Y +I F+ L+ + + A A + A+ A+ D+A + E YP Sbjct: 163 FKDGDYSGSIASFESFLSRHPQSALAPAAAYWIGNAHYAMRNFDKAIAAQQRLIETYPDS 222 Query: 261 Y 261 Sbjct: 223 P 223 >gi|291276529|ref|YP_003516301.1| putative lipoprotein [Helicobacter mustelae 12198] gi|290963723|emb|CBG39557.1| putative lipoprotein [Helicobacter mustelae 12198] Length = 214 Score = 79.0 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 73/188 (38%), Gaps = 10/188 (5%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 + + ++ A +G + ++ + Y++ + +K + A +F+ Sbjct: 3 IIFVIYATAFLVFLGCSSKKEKNEFNKPAMYW------YQEMLKEIKSGSLENADNHFSS 56 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 + + + ++L+ ++ A +EY+ +Y + NVDY+ YL ++ Sbjct: 57 LQSEHINSPLLPDAMLILGKAHQVEKEFVLADYYFDEYLKRYATADNVDYITYLKIQTHY 116 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IGRYY 200 + DQ+ + + + ++++ +S Y+ R L E+ I Y Sbjct: 117 LAFVNYSKDQQFLENAVIEIQNFLDKFPDSRYLD--LIKTMQLRLLLGRNELNRAIANVY 174 Query: 201 LKRGEYVA 208 K+ + A Sbjct: 175 AKQKKPNA 182 >gi|212550503|ref|YP_002308820.1| hypothetical protein CFPG_146 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548741|dbj|BAG83409.1| conserved hypothetical protein [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 280 Score = 78.6 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 80/198 (40%), Gaps = 10/198 (5%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A + ++ +++A + ++SL + A Y Y A+ + Y Sbjct: 35 YETAKKYFDDKKYNQAIILLEGAAPLMKHTAYEKESLYLLAQSFYKKKDYASASRYFQSY 94 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 T +P+ + + ++ S +DQ T +Q + ++ Y+ S + ++ Sbjct: 95 YTSFPKGEYTESAHFYSAYSLYLASPSARFDQSDTYKAIQQLQDFLKYYSQSNKKEIVKY 154 Query: 181 YVTVGRNQLAAKEVEIGRYYLKR----------GEYVAAIPRFQLVLANYSDAEHAEEAM 230 ++ + +LA KE+ R Y G Y++ I Q L +Y +++ E+ + Sbjct: 155 ALSELQEKLALKELMAIRLYYDLGNYLLYPFPGGNYLSCIITAQNALKSYPFSKYREDFI 214 Query: 231 ARLVEAYVALALMDEARE 248 + A +AL +E Sbjct: 215 YYIFMARYKIALQSIKKE 232 >gi|189347955|ref|YP_001944484.1| lipoprotein [Chlorobium limicola DSM 245] gi|189342102|gb|ACD91505.1| putative lipoprotein [Chlorobium limicola DSM 245] Length = 287 Score = 78.2 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 66/208 (31%), Gaps = 39/208 (18%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y KA+ + +++F+ A L + A Y + +Y A + Sbjct: 31 YGKALGYYNKEDFNDAALELEPVIFTSRATAFEDDVLFLLAQSYYKSEQYLLAVDMYSRL 90 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT--NS------ 172 + Q P S + + S+ Q+ D T +Q + +E Y +S Sbjct: 91 LQQVPSSPFARQAQFQLAKSHEQLSTHFELDHEHTLKAIQQFALYLEVYPGRDSAQITAD 150 Query: 173 -------------------PYV------------KGARFYVTVGRNQLAAKEVEIGRYYL 201 Y A+ + R +LA I R Y+ Sbjct: 151 ADMYRELLKVNPANESYKERYANFQSELEGVESQDYAQKAIVKLREKLAKNTYYIARQYI 210 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEA 229 + +Y A+ F V+ Y D + E+A Sbjct: 211 QLKKYKASGIYFDEVIKRYPDTIYFEQA 238 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 28/66 (42%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A +++ + + + YF++ + +P ++ V K+ A+ + Y Sbjct: 203 YYIARQYIQLKKYKASGIYFDEVIKRYPDTIYFEQAWKGRIDVLIKRKKWFDASQAVDRY 262 Query: 121 ITQYPE 126 + +P+ Sbjct: 263 LQLFPD 268 >gi|313681433|ref|YP_004059171.1| outer membrane assembly lipoprotein yfio [Sulfuricurvum kujiense DSM 16994] gi|313154293|gb|ADR32971.1| outer membrane assembly lipoprotein YfiO [Sulfuricurvum kujiense DSM 16994] Length = 258 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 68/184 (36%), Gaps = 10/184 (5%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 IA+ L+ S+D+ + + YEK V + N +A YF+ + Sbjct: 6 LIAITTLILLTGCGSKDLEEFNKPAEYW----YEKMVTAVSNGNLERADSYFSSLQSEHI 61 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 + ++ ++ A + +Y + +EYI +Y + +Y +L + + + Sbjct: 62 SSPFLSEATMIMAQAHMAHEEYLLSEHFLDEYIRRYATPEGREYAEFLKIKAKFLALPNP 121 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVK---GARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 DQ L + Y NS Y+ + + R L +I Y + G+ Sbjct: 122 GRDQGLIDETLNSVETFKRSYPNSMYLPLVHSMETQLQLARGVLNE---QIAELYERLGK 178 Query: 206 YVAA 209 AA Sbjct: 179 PKAA 182 >gi|213585772|ref|ZP_03367598.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 75 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 7/82 (8%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + FL G S++ D+ E+Y A L++ N+ +A Sbjct: 1 MTRMKYLVAAATLSLFLAGCS--GSKEEVPDNPP-----NEIYATAQQKLQDGNWKQAIT 53 Query: 79 YFNQCSRDFPFAGVARKSLLMS 100 +PF +++ L Sbjct: 54 QLEALDNRYPFGPYSQQVQLDL 75 >gi|268679494|ref|YP_003303925.1| outer membrane assembly lipoprotein YfiO [Sulfurospirillum deleyianum DSM 6946] gi|268617525|gb|ACZ11890.1| outer membrane assembly lipoprotein YfiO [Sulfurospirillum deleyianum DSM 6946] Length = 215 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 75/191 (39%), Gaps = 11/191 (5%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K A + + + F+ G + +DV+ T Y + +K Q+ KA + Sbjct: 2 KIANVLIVASLMAFISGCASK-EKDVFNMPATYW------YGEITKEIKNQDLEKADSLY 54 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + + + + +++LM A +Y A +EY+ +Y +N D+V ++ + Sbjct: 55 TSLASEHVESPLLPEAMLMLANAHSQDEEYLLANFYLDEYLRRYGNKENADHVRFMKIKA 114 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--EIGR 198 + + +Q+ + + RY +S + A+ + R Q+ + I Sbjct: 115 NYEAFPNPNRNQQLLLDTIVQTKDFLVRYPDSKFAPLAQT--ILVRLQMGEYFLDENIQS 172 Query: 199 YYLKRGEYVAA 209 Y + + AA Sbjct: 173 LYARIDKPEAA 183 >gi|307638050|gb|ADN80500.1| competence lipoprotein [Helicobacter pylori 908] Length = 220 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 75/201 (37%), Gaps = 8/201 (3%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 +L F + +F ++A+ + + + + + + + + + N A Sbjct: 2 RLKHFKIFLFIAMAMIVIGTGCTNKKKKKDEYNKPAIFWYQGILREILFA----NLETAD 57 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 Y++ + + + +++L +Y A+ +EYI ++ NVDY+ +L Sbjct: 58 NYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLK 117 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195 S+ ++ DQ + + +E+Y NS Y + + L E+ Sbjct: 118 LQSHYYAFKNHSKDQEFISNAIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRA 175 Query: 196 IGRYYLKRGEYVAAIPRFQLV 216 I Y KR + + + Sbjct: 176 IANVYKKRHKPEGVKRYLERI 196 >gi|255321373|ref|ZP_05362533.1| outer membrane assembly lipoprotein YfiO [Campylobacter showae RM3277] gi|255301526|gb|EET80783.1| outer membrane assembly lipoprotein YfiO [Campylobacter showae RM3277] Length = 215 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 73/194 (37%), Gaps = 17/194 (8%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 L KF +FF VC + G + + L + Y + + +K ++ Sbjct: 1 MKNLIKFLSAVFF---VCLIGGCADKYTELYNL-------TPDQWYSEIIGDIKNRDLES 50 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY----PESKNVD 131 A +++ S + + + + LL+ A + +Y A +EY+ +Y P S+ Sbjct: 51 ADKHYTAMSSEHVASPLLEQILLILAQAHANDEEYLMANFYLDEYLKRYGDGGPRSE--- 107 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 + YL + +Q+ + + + + + Y N+ Y + + + Sbjct: 108 FAQYLKIKANFDSFSQPNRNQKLMQDSIAEIEKFLYIYPNTQYRPLIETMLVKFKLAIYN 167 Query: 192 KEVEIGRYYLKRGE 205 +V+I Y + G Sbjct: 168 LDVQIADLYERTGR 181 >gi|332704838|ref|ZP_08424926.1| tetratricopeptide domain-containing protein [Desulfovibrio africanus str. Walvis Bay] gi|332554987|gb|EGJ52031.1| tetratricopeptide domain-containing protein [Desulfovibrio africanus str. Walvis Bay] Length = 1057 Score = 77.1 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 82/220 (37%), Gaps = 31/220 (14%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQ 104 + + E+Y+ AV + +A E + Q + P + + L A Sbjct: 392 VDEKGKPILTHEELYQVAVRHFINSEYKEAIEVYKQLRAN-PEVKGNMREEVLHNLAQAS 450 Query: 105 YSA------GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 Y+ + + E I P+S+ V +G+++ + + ++P Sbjct: 451 YNLYRDTLRDHFHEVVGALEAAINFKPDSEKVPQALLQLGLAHLR-VDNIP-------EA 502 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 Y + ++Y V + G YY ++G+Y A +Q+V+ Sbjct: 503 SAYFKILTDKYPQDLNVPYI--------------DFYWGDYYYRKGKYREAADAYQVVVQ 548 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 ++ D+ +A L + L ++A ++V I +R+P Sbjct: 549 DHPDSPIIRDASLGLARSLEKLEYYEQAYQIVDFIDKRWP 588 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 38/250 (15%), Positives = 75/250 (30%), Gaps = 52/250 (20%) Query: 49 DSVTDVRYQREVYEKAVLFLK------EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 V + ++ A +F + P + ++LL Sbjct: 432 PEVKGNMREEVLHNLAQASYNLYRDTLRDHFHEVVGALEAAINFKPDSEKVPQALLQLGL 491 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYV-------YYLVGMSYAQMIRDVPYDQRAT 155 +A++ + +YP+ NV Y+ YY G Sbjct: 492 AHLRVDNIPEASAYFKILTDKYPQDLNVPYIDFYWGDYYYRKG---------------KY 536 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--VEIGRYYLKR--GEYVA--- 208 + +V+ + +SP ++ A + +L E +I + KR Y+ Sbjct: 537 REAADAYQVVVQDHPDSPIIRDASLGLARSLEKLEYYEQAYQIVDFIDKRWPRFYIEDPE 596 Query: 209 -------AIPRFQLVLA------NY----SDAEHAEEAMARLVEAYVALALMDEAREVVS 251 R Q NY A + +AR+ + Y+ + AR++ Sbjct: 597 FLRLSGELANRLQKFGEAKDDLWNYYNMQPAATGNDVILARIGDIYLRAGQRNAARDIYR 656 Query: 252 LIQERYPQGY 261 + RYP+ Sbjct: 657 TVAARYPEDE 666 Score = 42.0 bits (98), Expect = 0.088, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 54/166 (32%), Gaps = 19/166 (11%) Query: 104 QYSAGKYQQAASLGEEYITQYPESK-NV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + +Y++A + ++ + PE K N+ + V + + + + RD D ++ Sbjct: 412 HFINSEYKEAIEVYKQ-LRANPEVKGNMREEVLHNLAQASYNLYRDTLRD--HFHEVVGA 468 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + + +S V A + + L+ A F+++ Y Sbjct: 469 LEAAINFKPDSEKVPQALLQLGLAH--------------LRVDNIPEASAYFKILTDKYP 514 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 + + Y EA + ++ + +P R Sbjct: 515 QDLNVPYIDFYWGDYYYRKGKYREAADAYQVVVQDHPDSPIIRDAS 560 >gi|325996655|gb|ADZ52060.1| competence lipoprotein [Helicobacter pylori 2018] Length = 220 Score = 77.1 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 75/202 (37%), Gaps = 10/202 (4%) Query: 18 QLYKFALTIFFSIAVCFLV-GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 +L F + +F ++A+ + G + + + Y+ + + N A Sbjct: 2 RLKHFKIFLFIAMAMIVIGTGCANKKKKKDEYNKPAIFW-----YQGILREILFANLETA 56 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 Y++ + + + +++L +Y A+ +EYI ++ NVDY+ +L Sbjct: 57 DNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFL 116 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE- 195 S+ ++ DQ + + +E+Y NS Y + + L E+ Sbjct: 117 KLQSHYYAFKNHSKDQEFISNAIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNR 174 Query: 196 -IGRYYLKRGEYVAAIPRFQLV 216 I Y KR + + + Sbjct: 175 AIANVYKKRHKPEGVKRYLERI 196 >gi|78188052|ref|YP_378390.1| putative lipoprotein [Chlorobium chlorochromatii CaD3] gi|78170251|gb|ABB27347.1| putative lipoprotein [Chlorobium chlorochromatii CaD3] Length = 311 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 77/265 (29%), Gaps = 46/265 (17%) Query: 5 LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64 L + + I + I ++ L G + V+D Y +A Sbjct: 7 LFKNLSILAMTFSRFIASVCLIALPVSALSLSGCSSSRQPTTASEQVSDG------YARA 60 Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 +K+ ++ A + L Y +Y AA + + Sbjct: 61 EALIKKGDYRSAVLVLEPILFTSRATALEDDVLFRLGQAYYHTEQYLLAADMFTKVQQL- 119 Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-------------- 170 P S ++V SY +M DQ T+ ++ + E Y Sbjct: 120 PASPYAATAQFMVASSYEKMSPPFELDQAYTQKAIEEFALYRELYPLTDSVRSAEQAAFW 179 Query: 171 -------------------------NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 S V+ A +T R +LA + +Y + G+ Sbjct: 180 KEMLKVDAANETYKKNYAQAMVGMSRSDSVRYAGKAITTLREKLAHNAYSVALHYQQLGK 239 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAM 230 AA V+A Y D + + AM Sbjct: 240 LKAATIFLDEVIARYPDTSYYKLAM 264 >gi|317010057|gb|ADU80637.1| hypothetical protein HPIN_07240 [Helicobacter pylori India7] Length = 220 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 10/201 (4%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + +K L I +I V ++ +D Y Y+ + + N A Sbjct: 4 KHFKTFLFITMAIIVIGTGCANKKKKKDEYNKPAIFW------YQGILREILFANLETAD 57 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 Y++ + + + +++L +Y A+ +EYI ++ NVDY+ +L Sbjct: 58 NYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLK 117 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195 S+ ++ DQ + + +E+Y NS Y + + L E+ Sbjct: 118 LQSHYYAFKNHSKDQEFISNAIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRA 175 Query: 196 IGRYYLKRGEYVAAIPRFQLV 216 I Y KR + + + Sbjct: 176 IANVYKKRHKPEGVKRYLERI 196 >gi|152993490|ref|YP_001359211.1| hypothetical protein SUN_1907 [Sulfurovum sp. NBC37-1] gi|151425351|dbj|BAF72854.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 216 Score = 76.3 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 71/192 (36%), Gaps = 10/192 (5%) Query: 21 KFALTIFFSIAVCFL-VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 F ++ IAV FL VG + + Y++ + N KA Y Sbjct: 2 NFKKSLLLGIAVAFLFVGCSKDDDDVAEFNKPALYW-----YQQIGNSIAAGNMDKADAY 56 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 + + + + + +++M A +Y A +EY ++ KN +Y+ Y+ Sbjct: 57 YISLKSEHMRSPLMQTAMMMLAVAHMDNEEYLLAGYYLDEYNKRFGGEKNREYIEYMKLK 116 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--EIG 197 + I+DV DQ+ + + RY S Y + R +A + I Sbjct: 117 AAFLGIKDVYKDQKLIMDSINGAGTYLLRYPGSTYTP--LVKTILVRLHMAQYLLNENIA 174 Query: 198 RYYLKRGEYVAA 209 Y + G+ AA Sbjct: 175 ALYERTGKPEAA 186 >gi|224438166|ref|ZP_03659101.1| hypothetical protein HcinC1_09310 [Helicobacter cinaedi CCUG 18818] gi|313144611|ref|ZP_07806804.1| competence lipoprotein [Helicobacter cinaedi CCUG 18818] gi|313129642|gb|EFR47259.1| competence lipoprotein [Helicobacter cinaedi CCUG 18818] Length = 213 Score = 76.3 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 67/187 (35%), Gaps = 12/187 (6%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + + A G + ++V + YE + + N A YF Sbjct: 2 RIYAFMCLLFANLIFFGCAK---KEVEYNKPASYW-----YESIIKEINFGNLEGADGYF 53 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + + + + +++L+ +Y AA +EY+ +Y N DYV YL ++ Sbjct: 54 SSLQSEHINSPLVPEAMLILGEAHMEKDEYLLAAFYFDEYLKRYTSLANQDYVRYLKILT 113 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IGR 198 ++ DQ ++ ++ Y NS Y + + QL E+ I Sbjct: 114 NFYGFKNYSKDQEFIAQSIKEAQNFLQSYPNSRYTPYVEY--IYIKFQLGQIELYKAIAN 171 Query: 199 YYLKRGE 205 Y K+ + Sbjct: 172 VYDKQDK 178 >gi|110639391|ref|YP_679600.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406] gi|110282072|gb|ABG60258.1| TPR repeat protein [Cytophaga hutchinsonii ATCC 33406] Length = 265 Score = 76.3 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 79/213 (37%), Gaps = 2/213 (0%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 +VC L+ + + S + + +E A+ + + KA + Sbjct: 4 SVCALIVFLQVSCGK--FNHLQKTGTPQEKLTAAIEYYNNGDNYKAGVLLEDITPILKGK 61 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 G A +L A Y +Y +A +++ YP SK V+ Y+ S + Sbjct: 62 GEAETALYYLANNYYKQKQYMMSAYYFKDFYLTYPRSKYVEETMYMNVYSLYLNSPEYNL 121 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 DQ +T L+ M+ + RY + Y+ V +L K E Y K G Y +A+ Sbjct: 122 DQTSTYDCLKAMTTFLTRYPKTIYLDQCNAIVDELNAKLMHKAFEHSMMYHKVGNYKSAV 181 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 + Y ++ + E+A + LA Sbjct: 182 VAIGNFVNEYPNSIYGEKAYFTRFTSQYHLAKN 214 >gi|119358468|ref|YP_913112.1| putative lipoprotein [Chlorobium phaeobacteroides DSM 266] gi|119355817|gb|ABL66688.1| putative lipoprotein [Chlorobium phaeobacteroides DSM 266] Length = 298 Score = 76.3 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 80/240 (33%), Gaps = 39/240 (16%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E Y A+ ++++ A + + L A ++ +Y +A + Sbjct: 40 ERYAAALADYNKKDYDDAALTLEALMFSVRGSALEDDVLFYLAQSYFNTKQYLLSAEMYS 99 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-------- 170 + S + + S+ ++ +D TK +Q + +E+Y Sbjct: 100 RLLQLNAGSPYTPTAQFQLAKSHEKLSSHYEFDHEHTKKAIQQYALYIEQYPGRDSAVVA 159 Query: 171 ---------------NSPYVKG----------------ARFYVTVGRNQLAAKEVEIGRY 199 N+ Y A+ + R++LA +V I Sbjct: 160 ADIQTYQELLKINPANANYQDQLAVLKLESERSGSLSYAKNAIKTFRDKLARNKVSIAHQ 219 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y++ G+ A+ + V+ Y D + E A V+A + EA + + + YP+ Sbjct: 220 YIQLGKPKGAVIFYDEVIRFYPDTIYLEAAWKGKVDALILRKKWMEAGQALDQYLQLYPE 279 >gi|313674445|ref|YP_004052441.1| hypothetical protein [Marivirga tractuosa DSM 4126] gi|312941143|gb|ADR20333.1| Tetratricopeptide TPR_1 repeat-containing protein [Marivirga tractuosa DSM 4126] Length = 1022 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 83/218 (38%), Gaps = 24/218 (11%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 + + + +D Y Y A + ++ F K+ +YF + ++ A +++ Sbjct: 486 SSYEKSMRNSNSSDGWYANLNYGLAHAYYNDKQFEKSLQYFKEYLKNGKSATYYEDAVIR 545 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 A Y Y A + ++ I + N DY Y+ G+ + KL Sbjct: 546 LADCYYVTKNYSLAINYYQKAIDD--RNSNSDYAYFQKGVVNS--------IDGEIKLAN 595 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 Q ++++ Y+NS Y A + QLA + G+Y AI F +L N Sbjct: 596 QSFDKVIKDYSNSNYYDNA----IFQKAQLA----------FESGQYETAINGFSNLLKN 641 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + A ++ AY L + A E +LI + Y Sbjct: 642 LPQSPLRPYAYSKRALAYFNLQQYENAEEDYTLILQNY 679 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 76/202 (37%), Gaps = 15/202 (7%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++K V+ + A + F++ +D+ + ++ A + + +G+Y+ A + Sbjct: 578 YFQKGVVNSIDGEIKLANQSFDKVIKDYSNSNYYDNAIFQKAQLAFESGQYETAINGFSN 637 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT---------KLMLQYMSRIVERYT 170 + P+S Y Y ++Y + + ++ T ++ + E Y+ Sbjct: 638 LLKNLPQSPLRPYAYSKRALAYFNLQQYENAEEDYTLILQNYLTHSTANGALAGLQELYS 697 Query: 171 NSPYVKGARFYVTVGRN------QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 Y+ +N ++ E + + +Y AI F+ + NY D Sbjct: 698 IMDKEGDLEQYLIAYKNANPNDGEVTKIEFDAAQSLYFNQKYDRAISSFKAYIDNYPDHS 757 Query: 225 HAEEAMARLVEAYVALALMDEA 246 +A L ++Y ++EA Sbjct: 758 LTADARYYLADSYYRNDQLNEA 779 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 68/209 (32%), Gaps = 27/209 (12%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGV-ARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A ++ + + K +Y + + A+ L+ A + K+ +A +EY + Sbjct: 216 ANIYYQRGQYQKLIDYAEDLLPR--LSRLEAQNVKLLIADAYFEQNKFSEANEYFQEYRS 273 Query: 123 ----------QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI------- 165 Y + YV Y M + + K L + Sbjct: 274 GNKGKLDRELLY----RMGYVAYQ--MKDYDEAIKLFEEVGIAKDSLSQYNAYYLGGLYL 327 Query: 166 -VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 E Y S + ++ ++ + LK+G A+ + + ++ Sbjct: 328 RQENYRYSSNAYEQAKLLNYNQDIAEESHFQLAKLNLKQGNTANAVAELSSFIEKHPNSS 387 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLI 253 + +A L EAY+ ++A E + I Sbjct: 388 YLTQANELLSEAYLNSNAYEQAIEFLESI 416 Score = 38.9 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 38/92 (41%), Gaps = 10/92 (10%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV-ARKSL----LMSAFVQYSAGKYQ 111 ++Y+ V + +++ ++ A F + + A + L+S ++ +S G+ + Sbjct: 29 ADDIYQDGVEYFEQKQYTAAQNKFEEYQNHKNNERLKAENAEYYSALISIYLYHSDGEKR 88 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + ++ +P Y+ +G Y + Sbjct: 89 -----VKSFVEFHPTHPKASEAYFELGNFYFR 115 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 73/218 (33%), Gaps = 53/218 (24%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 +Y + + +++ +A + F + + + Y+ +++ Sbjct: 284 LYRMGYVAYQMKDYDEAIKLFEEVGIAKDSLSQYNAY------YLGGLYLRQENYRYSSN 337 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 E+ ++++ S+ Q+ + + Q T + +S +E++ NS Y+ Sbjct: 338 AYEQAKLLN-YNQDIAE------ESHFQLAK-LNLKQGNTANAVAELSSFIEKHPNSSYL 389 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV-------------LANYSD 222 A ++ YL Y AI + + + Y Sbjct: 390 TQANELLSEA--------------YLNSNAYEQAIEFLESINNKSIKLKEAYQKVTFYQG 435 Query: 223 AEHAEEAMARLVEAYVALALMDEAREV---VSLIQERY 257 AE+ +A Y A+ L ++ + SL+ E Y Sbjct: 436 AEYFNQANY-----YRAMQLFKKSVDYPQNKSLLGETY 468 Score = 35.1 bits (80), Expect = 9.6, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 64/211 (30%), Gaps = 22/211 (10%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 T + +E + +E+N++K+ +Y+ + D A+ +S + Sbjct: 97 PTHPKASEAYFELGNFYFREKNYAKSIQYYEKTDDDKLRGEDKTHFQFKLAYAYFSRRAF 156 Query: 111 QQAASLGEEYIT---QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +A QY + N Y G Y + + ++ Sbjct: 157 DEALPYFNRLKRRDNQYQSASN-----YYAGYIYFEQKDFDEALIDLERAAENDTYKVST 211 Query: 168 -------RYTNSPYVKGARFYVTVGRNQLAAKE-----VEIGRYYLKRGEYVAAIPRFQL 215 Y Y + Y +L+ E + I Y ++ ++ A FQ Sbjct: 212 ANMMANIYYQRGQY-QKLIDYAEDLLPRLSRLEAQNVKLLIADAYFEQNKFSEANEYFQE 270 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEA 246 + + E + R+ + DEA Sbjct: 271 YRSGNKG-KLDRELLYRMGYVAYQMKDYDEA 300 >gi|77163685|ref|YP_342210.1| TPR repeat-containing protein [Nitrosococcus oceani ATCC 19707] gi|254435696|ref|ZP_05049203.1| tol-pal system protein YbgF, putative [Nitrosococcus oceani AFC27] gi|76881999|gb|ABA56680.1| TPR repeat protein [Nitrosococcus oceani ATCC 19707] gi|207088807|gb|EDZ66079.1| tol-pal system protein YbgF, putative [Nitrosococcus oceani AFC27] Length = 257 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 8/134 (5%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 V + Y+ A+ LKE + +A F+Q + +P + + +Y G + A Sbjct: 128 VDSGEQTYQAALELLKEGRYEEAIAAFDQFPQQYPDSRYRPNAQYWLGEARYMLGDFNAA 187 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 A + + QYPES V G++Y ++ + + ++ RY S Sbjct: 188 ADTFQALVEQYPESAKVPDAMLKQGLAYYELAQ--------WEQAKAQFQAVMTRYPAST 239 Query: 174 YVKGARFYVTVGRN 187 + A + Sbjct: 240 ASRLAEERFEKMKR 253 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 14/113 (12%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + + + ++Y +S Y A++++ R L G++ AA FQ Sbjct: 148 EEAIAAFDQFPQQYPDSRYRPNAQYWLGEARYML--------------GDFNAAADTFQA 193 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 ++ Y ++ +AM + AY LA ++A+ + RYP +R E Sbjct: 194 LVEQYPESAKVPDAMLKQGLAYYELAQWEQAKAQFQAVMTRYPASTASRLAEE 246 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 26/146 (17%) Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 ++ L G+Y++A + +++ QYP+S+ Y +G + + Sbjct: 131 GEQTYQAALELL----KEGRYEEAIAAFDQFPQQYPDSRYRPNAQYWLGEARYML----- 181 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 +VE+Y S V A + + LA E+ ++ A Sbjct: 182 ---GDFNAAADTFQALVEQYPESAKVPDA-----MLKQGLAYYELA---------QWEQA 224 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE 235 +FQ V+ Y + + A R + Sbjct: 225 KAQFQAVMTRYPASTASRLAEERFEK 250 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 LK G Y AI F Y D+ + A L EA L + A + + E+YP+ Sbjct: 142 LKEGRYEEAIAAFDQFPQQYPDSRYRPNAQYWLGEARYMLGDFNAAADTFQALVEQYPES 201 Query: 261 YWARYVETLVK 271 A+ + ++K Sbjct: 202 --AKVPDAMLK 210 >gi|303247252|ref|ZP_07333526.1| tol-pal system protein YbgF [Desulfovibrio fructosovorans JJ] gi|302491411|gb|EFL51299.1| tol-pal system protein YbgF [Desulfovibrio fructosovorans JJ] Length = 341 Score = 75.9 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 50/127 (39%), Gaps = 8/127 (6%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 VY K + + + +A F + +R+F + + +L + + G + AA Sbjct: 221 PADAVYAKGLSSFNARQYQQALGIFQEFARNFKTSSLMPNALFWTGECYFQLGDFANAAL 280 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 +E I +YP+S + G+++ ++ ++++Y +S + Sbjct: 281 AYQEVIEKYPKSPKHADALFKRGVAFMKL--------GNAGAAKLSFKEVIDKYPDSAFA 332 Query: 176 KGARFYV 182 A+ + Sbjct: 333 TRAKSMM 339 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 47/142 (33%), Gaps = 22/142 (15%) Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 N Y G+S R + L + S + A F+ Sbjct: 220 NPADAVYAKGLSSFNA--------RQYQQALGIFQEFARNFKTSSLMPNALFWTGEC--- 268 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 Y + G++ A +Q V+ Y + +A+ + A++ L A+ Sbjct: 269 -----------YFQLGDFANAALAYQEVIEKYPKSPKHADALFKRGVAFMKLGNAGAAKL 317 Query: 249 VVSLIQERYPQGYWARYVETLV 270 + ++YP +A ++++ Sbjct: 318 SFKEVIDKYPDSAFATRAKSMM 339 >gi|297380560|gb|ADI35447.1| competence lipoprotein (comL) [Helicobacter pylori v225d] Length = 220 Score = 75.5 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 10/201 (4%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + +K L I +I V ++ +D Y Y+ + + N A Sbjct: 4 KHFKTFLFITMAIIVIGTGCTNKKKKKDEYNKPAIFW------YQGILREILFANLETAD 57 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 Y++ + + + +++L +Y A+ +EYI ++ NVDY+ +L Sbjct: 58 NYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLK 117 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195 S+ ++ DQ + + +E+Y NS Y + + L E+ Sbjct: 118 LQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRA 175 Query: 196 IGRYYLKRGEYVAAIPRFQLV 216 I Y KR + + + Sbjct: 176 IANVYKKRHKPEGVKRYLERI 196 >gi|300112860|ref|YP_003759435.1| tol-pal system protein YbgF [Nitrosococcus watsonii C-113] gi|299538797|gb|ADJ27114.1| tol-pal system protein YbgF [Nitrosococcus watsonii C-113] Length = 255 Score = 75.5 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 51/134 (38%), Gaps = 8/134 (5%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 V + Y+ A+ LKE ++ +A F+Q + +P + + +Y G + A Sbjct: 126 VDSGEQAYQVALGLLKEGHYEEAIAAFDQFLQQYPDSRYRPNAQYWLGEARYMLGDFNDA 185 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + + QYPES V G++Y ++ + + ++ RY S Sbjct: 186 VGTFQALVEQYPESAKVPDAMLKQGLAYYELAQ--------WEQAKAQFQAVMTRYPAST 237 Query: 174 YVKGARFYVTVGRN 187 + A + + Sbjct: 238 ASRLAEERLEKMKR 251 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 52/133 (39%), Gaps = 25/133 (18%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 G Y++A + ++++ QYP+S+ Y +G + + + + Sbjct: 141 KEGHYEEAIAAFDQFLQQYPDSRYRPNAQYWLGEARYML--------GDFNDAVGTFQAL 192 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 VE+Y S V A + + LA E+ ++ A +FQ V+ Y + Sbjct: 193 VEQYPESAKVPDA-----MLKQGLAYYELA---------QWEQAKAQFQAVMTRYPASTA 238 Query: 226 ---AEEAMARLVE 235 AEE + ++ Sbjct: 239 SRLAEERLEKMKR 251 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 50/119 (42%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + + + +++Y +S Y A++++ R L G++ A+ Sbjct: 143 GHYEEAIAAFDQFLQQYPDSRYRPNAQYWLGEARYML--------------GDFNDAVGT 188 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 FQ ++ Y ++ +AM + AY LA ++A+ + RYP +R E ++ Sbjct: 189 FQALVEQYPESAKVPDAMLKQGLAYYELAQWEQAKAQFQAVMTRYPASTASRLAEERLE 247 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 2/81 (2%) Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 + ++ LK G Y AI F L Y D+ + A L EA L ++A Sbjct: 130 EQAYQVALGLLKEGHYEEAIAAFDQFLQQYPDSRYRPNAQYWLGEARYMLGDFNDAVGTF 189 Query: 251 SLIQERYPQGYWARYVETLVK 271 + E+YP+ A+ + ++K Sbjct: 190 QALVEQYPES--AKVPDAMLK 208 >gi|294507597|ref|YP_003571655.1| hypothetical protein SRM_01782 [Salinibacter ruber M8] gi|294343925|emb|CBH24703.1| putative TPR-repeat protein [Salinibacter ruber M8] Length = 1064 Score = 75.5 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 72/242 (29%), Gaps = 31/242 (12%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D V + +Y+ A + + DFP + + +L + + Sbjct: 637 DRVDGAGVEYALYQGGRALYYAGQPGAARDRLRRFVDDFPDSPLRPDALYRLGDIHFQEQ 696 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y+ A + + +PE+ Y +G ++ K +Q ++E Sbjct: 697 RYEAARDAFTQLLDDHPETARAAEAQYAIGDTHYNA--------GEMKDAVQAYRAVLET 748 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKE-----------------------VEIGRYYLKRGE 205 Y P A + N ++ R +RG+ Sbjct: 749 YPERPSASEAASSLFFALNAAGQQDRADKLIAAIANRVPDANMEDRLRYHRARAAYQRGD 808 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 A+ F+ + S +A L Y +EA+ + + ++YP + Sbjct: 809 SKRALRLFRTFVRTTSTEARVPDAYYYLGLLYADTDQYEEAKNYLRQLTDQYPDSEYLSD 868 Query: 266 VE 267 Sbjct: 869 AS 870 Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 88/256 (34%), Gaps = 35/256 (13%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 +A L + + + + + ++KA + + +A F + P Sbjct: 470 LATDNLDSALDAYTEAIDRGAAPESVTAKVRFQKAWSLYRNGRYGEAGTEFQALADAHPE 529 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 +++L Y +Y A + Y+ P++ Y + +Y + Sbjct: 530 TARGQEALFWGGDTFYQREQYGAARRQFQAYLDTSPDAPQRAGARYALAWTYFK------ 583 Query: 150 YDQRATKLMLQYMSRIVERY-----TNSPYVKGARFYVTVGRNQL--------------- 189 QR + + R ++ Y ++ PY + AR + L Sbjct: 584 --QRRFEPAARSFRRFLDVYDRDSMSDVPYRQDARLRLADCYFALKRYDDARAAYDRVDG 641 Query: 190 AAKEVEI-----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 A E + YY G+ AA R + + ++ D+ +A+ RL + + + Sbjct: 642 AGVEYALYQGGRALYYA--GQPGAARDRLRRFVDDFPDSPLRPDALYRLGDIHFQEQRYE 699 Query: 245 EAREVVSLIQERYPQG 260 AR+ + + + +P+ Sbjct: 700 AARDAFTQLLDDHPET 715 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 78/236 (33%), Gaps = 34/236 (14%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + V + +Y +A L + + + ++ R++P AR + L A G Sbjct: 123 ASHVAAPQALYLEARAALAQGDDAGTRRLLSRLQREYPSHPRARTARLGLAQYYLDQGNP 182 Query: 111 QQAASLGEEYITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 +A S + I P + YL+G +Q L Y ++ RY Sbjct: 183 DRAKSQLQ-TIATAPSRPDEGARALYLLG--------RTEQNQGNPNAALPYFKQVYSRY 233 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRY-----------------------YLKRGEY 206 N+ A + V + +L + + Y + G+Y Sbjct: 234 PNAELAPAALYARGVTQVRLERYDRATASFERLGEQFPDSPFSENLGTILGEVYYRVGQY 293 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 A Q L + + + A + L E Y AL ++A LI E P + Sbjct: 294 ENAATELQRRLPDLTGSTRA-RTLFLLGETYSALGRREDATTQYRLILEELPNSSY 348 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 73/239 (30%), Gaps = 45/239 (18%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G R R D +Y + +EQ + A + F Q D P A ++ Sbjct: 662 GAARDRLRRFVDDFPDSPLRPDALYRLGDIHFQEQRYEAARDAFTQLLDDHPETARAAEA 721 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV-----------------DYVYYLVGM 139 Y+AG+ + A + YPE + D L+ Sbjct: 722 QYAIGDTHYNAGEMKDAVQAYRAVLETYPERPSASEAASSLFFALNAAGQQDRADKLIA- 780 Query: 140 SYAQMIRDVP-------------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + A + D Y + +K L+ V + V A +Y+ + Sbjct: 781 AIANRVPDANMEDRLRYHRARAAYQRGDSKRALRLFRTFVRTTSTEARVPDAYYYLGLL- 839 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 Y +Y A + + Y D+E+ +A RL E Y+ ++ Sbjct: 840 -------------YADTDQYEEAKNYLRQLTDQYPDSEYLSDASLRLGEIYLEEGANEQ 885 Score = 37.8 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 57/183 (31%), Gaps = 22/183 (12%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 D D + Y ++ L+ S A +Q P + + L V+ Sbjct: 895 EQDDTRDELRAQARYGQSQALLQLGRTSAADTLLSQILEAEPQGPLRNAARLGLGRVREE 954 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 G+ +A L I + + Y +G + +R Q + ++ + R+ Sbjct: 955 QGRTDEALDLYRRVIRA-SDGETGAEALYRLG----RQLRR----QGNPQTAIRELERMP 1005 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + P AR + R Y RGE A+ + V Y A Sbjct: 1006 SLFAGHP-EWEARALLEQ------------ARAYRARGETGQAVQLYDEVQQAYGGTPFA 1052 Query: 227 EEA 229 E A Sbjct: 1053 ETA 1055 >gi|210135563|ref|YP_002302002.1| competence lipoprotein ComL [Helicobacter pylori P12] gi|210133531|gb|ACJ08522.1| competence lipoprotein ComL [Helicobacter pylori P12] gi|317179821|dbj|BAJ57607.1| competence lipoprotein [Helicobacter pylori F32] Length = 220 Score = 75.5 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 10/201 (4%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + +K L I +I V ++ +D Y Y+ + + N A Sbjct: 4 KHFKTFLFITMAIIVIGTGCANKKKKKDEYNKPAIFW------YQGILREILFANLETAD 57 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 Y++ + + + +++L +Y A+ +EYI ++ NVDY+ +L Sbjct: 58 NYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLK 117 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195 S+ ++ DQ + + +E+Y NS Y + + L E+ Sbjct: 118 LQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRA 175 Query: 196 IGRYYLKRGEYVAAIPRFQLV 216 I Y KR + + + Sbjct: 176 IANVYKKRHKPEGVKRYLERI 196 >gi|154148931|ref|YP_001406138.1| competence lipoprotein [Campylobacter hominis ATCC BAA-381] gi|153804940|gb|ABS51947.1| competence lipoprotein [Campylobacter hominis ATCC BAA-381] Length = 212 Score = 75.5 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 70/189 (37%), Gaps = 13/189 (6%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + KF + F++ + + G + ++Y + + + +K+ N A E Sbjct: 1 MKKF---LIFAVFIAIISGCSAKKGDEIYN------LAPQAWFNLIIKDIKDSNLKAADE 51 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 ++ S + + + L+ A Y A + +EYI +Y + Y +L Sbjct: 52 HYVSFSSEHIGSPLLESMTLILAQAHTMEEDYTLANTYLDEYIRRYGTDDKIQYAKFLKI 111 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--I 196 S +Q+ ++ + + + +Y ++ Y + + +LA E+ I Sbjct: 112 KSNFDSFNKPNRNQKLVQISIVEIQNFLMQYPDTKYKPLLETML--IKFRLAENELNKSI 169 Query: 197 GRYYLKRGE 205 Y K G Sbjct: 170 KNLYEKTGR 178 >gi|145588461|ref|YP_001155058.1| TPR repeat-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046867|gb|ABP33494.1| Tetratricopeptide TPR_2 repeat protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 243 Score = 75.5 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 54/137 (39%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S T +++ Y+ A+ + N KA E F+ + +P + +L S +Y+ Sbjct: 115 SGTVQPGEKKAYDDALKAFQAGNLKKADEGFSAFAAKYPKSPYLPLALYWSGNSKYANKD 174 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y A S + I +YP + +V + +Q+ + S I+ +Y Sbjct: 175 YAGAISQLQSLIKRYPNHPRIPAA--MVTLGNSQLESG------NKAAAKKTFSEIIAKY 226 Query: 170 TNSPYVKGARFYVTVGR 186 ++ K A+ + + Sbjct: 227 PDTDAAKDAQQLMAATK 243 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 41/118 (34%), Gaps = 14/118 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + S +Y SPY+ A ++ + +Y AI + Sbjct: 136 GNLKKADEGFSAFAAKYPKSPYLPLALYWSGNSK--------------YANKDYAGAISQ 181 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 Q ++ Y + AM L + + A++ S I +YP A+ + L+ Sbjct: 182 LQSLIKRYPNHPRIPAAMVTLGNSQLESGNKAAAKKTFSEIIAKYPDTDAAKDAQQLM 239 >gi|329904213|ref|ZP_08273696.1| TPR repeat containing exported protein [Oxalobacteraceae bacterium IMCC9480] gi|327548109|gb|EGF32830.1| TPR repeat containing exported protein [Oxalobacteraceae bacterium IMCC9480] Length = 256 Score = 75.2 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 52/141 (36%), Gaps = 8/141 (5%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V + +++ YE A+ K ++ + F R +P +G A + Y Sbjct: 121 VDGKETSVEPAEQKTYEAALALFKAGDYKTSGAAFTDFMRRYPQSGFAPSAQYFLGTTYY 180 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + Y+ A + + + YPE+ + YA++ + + + Sbjct: 181 AQRDYRNAITAQQVVVKNYPENPKAADALLNIASCYAELKDRP--------AAKKSLETL 232 Query: 166 VERYTNSPYVKGARFYVTVGR 186 V +Y +SP + A+ + R Sbjct: 233 VAQYPSSPAAQTAKERLAALR 253 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 53/142 (37%), Gaps = 22/142 (15%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A + +A + AG Y+ + + +++ +YP+S Y +G +Y Q Sbjct: 131 AEQKTYEAALALFKAGDYKTSGAAFTDFMRRYPQSGFAPSAQYFLGTTYYA--------Q 182 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R + + +V+ Y +P A + I Y + + AA Sbjct: 183 RDYRNAITAQQVVVKNYPENPKAADAL--------------LNIASCYAELKDRPAAKKS 228 Query: 213 FQLVLANYSDAEHAEEAMARLV 234 + ++A Y + A+ A RL Sbjct: 229 LETLVAQYPSSPAAQTAKERLA 250 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 14/102 (13%) Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 + + RY S + A+ +G Y + +Y AI Q+V+ N Sbjct: 153 AAFTDFMRRYPQSGFAPSAQ--------------YFLGTTYYAQRDYRNAITAQQVVVKN 198 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y + A +A+ + Y L A++ + + +YP Sbjct: 199 YPENPKAADALLNIASCYAELKDRPAAKKSLETLVAQYPSSP 240 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 22/66 (33%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 K G+Y + F + Y + A A L Y A A ++ + YP+ Sbjct: 143 FKAGDYKTSGAAFTDFMRRYPQSGFAPSAQYFLGTTYYAQRDYRNAITAQQVVVKNYPEN 202 Query: 261 YWARYV 266 A Sbjct: 203 PKAADA 208 >gi|15645988|ref|NP_208169.1| competence lipoprotein (comL) [Helicobacter pylori 26695] gi|108563749|ref|YP_628065.1| competence lipoprotein [Helicobacter pylori HPAG1] gi|188528168|ref|YP_001910855.1| competence lipoprotein [Helicobacter pylori Shi470] gi|217034451|ref|ZP_03439864.1| hypothetical protein HP9810_11g33 [Helicobacter pylori 98-10] gi|254779917|ref|YP_003058023.1| hypothetical protein HELPY_1365 [Helicobacter pylori B38] gi|308183491|ref|YP_003927618.1| hypothetical protein HPPC_06800 [Helicobacter pylori PeCan4] gi|2314548|gb|AAD08420.1| competence lipoprotein (comL) [Helicobacter pylori 26695] gi|107837522|gb|ABF85391.1| competence lipoprotein [Helicobacter pylori HPAG1] gi|188144408|gb|ACD48825.1| competence lipoprotein [Helicobacter pylori Shi470] gi|216943121|gb|EEC22595.1| hypothetical protein HP9810_11g33 [Helicobacter pylori 98-10] gi|254001829|emb|CAX30072.1| Conserved hypothetical protein [Helicobacter pylori B38] gi|261837482|gb|ACX97248.1| competence lipoprotein [Helicobacter pylori 51] gi|261838898|gb|ACX98663.1| competence lipoprotein (comL) [Helicobacter pylori 52] gi|308064154|gb|ADO06041.1| hypothetical protein HPSAT_06685 [Helicobacter pylori Sat464] gi|308065676|gb|ADO07568.1| hypothetical protein HPPC_06800 [Helicobacter pylori PeCan4] gi|315586018|gb|ADU40399.1| competence lipoprotein [Helicobacter pylori 35A] gi|317013165|gb|ADU83773.1| hypothetical protein HPLT_06915 [Helicobacter pylori Lithuania75] gi|317176833|dbj|BAJ54622.1| competence lipoprotein [Helicobacter pylori F16] gi|317178334|dbj|BAJ56122.1| competence lipoprotein [Helicobacter pylori F30] gi|317181315|dbj|BAJ59099.1| competence lipoprotein [Helicobacter pylori F57] gi|332672817|gb|AEE69634.1| competence lipoprotein [Helicobacter pylori 83] Length = 220 Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 10/201 (4%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + +K L I +I V ++ +D Y Y+ + + N A Sbjct: 4 KHFKTFLFITMAIIVIGTGCANKKKKKDEYNKPAIFW------YQGILREILFANLETAD 57 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 Y++ + + + +++L +Y A+ +EYI ++ NVDY+ +L Sbjct: 58 NYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLK 117 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195 S+ ++ DQ + + +E+Y NS Y + + L E+ Sbjct: 118 LQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRA 175 Query: 196 IGRYYLKRGEYVAAIPRFQLV 216 I Y KR + + + Sbjct: 176 IANVYKKRHKPEGVKRYLERI 196 >gi|255034845|ref|YP_003085466.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053] gi|254947601|gb|ACT92301.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053] Length = 1019 Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 83/205 (40%), Gaps = 38/205 (18%) Query: 64 AVLFLKEQNFSKAYEYFN------QCSRDFPFAGVARKSLLMSAFVQ-YSAGKYQQAASL 116 A +L +N+++A + + +D+ +L A Y + +A Sbjct: 573 ADCYLAAKNYNEAIRTYEQVAAKGKVDKDY--------ALFQKARAYVYMNRE-AEAKRQ 623 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 E I+QYP+SK++D Y+ + D+ + ++ ++ +R++ S + Sbjct: 624 FELLISQYPQSKHLDNAYFQLA--------DIDFQNQSYSAAVKGFTRMINEKPKSTLIP 675 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 A + Y Y AI F+ +L YSD+ AE A+ + E+ Sbjct: 676 AALLRR--------------AQSYYNLQVYEQAIVDFRKILTEYSDSPSAESALEGIQES 721 Query: 237 YVALALMDEAREVVSLIQERYPQGY 261 Y A+ +E +V+ ++++ P Sbjct: 722 YSAVGRPEEFNQVLGVVRKNNPGNE 746 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 84/253 (33%), Gaps = 34/253 (13%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 +A C+L + Y + ++ +++KA ++ ++A F + Sbjct: 572 LADCYLAAKNYNEAIRTYEQVAAKGKVDKDYALFQKARAYVYMNREAEAKRQFELLISQY 631 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 P + + A + + Y A I + P+S + SY + Sbjct: 632 PQSKHLDNAYFQLADIDFQNQSYSAAVKGFTRMINEKPKSTLIPAALLRRAQSYYNL--- 688 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV----------------------- 184 + + + +I+ Y++SP + A + Sbjct: 689 -----QVYEQAIVDFRKILTEYSDSPSAESALEGIQESYSAVGRPEEFNQVLGVVRKNNP 743 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 G +L E + R +Y AI Q L +Y ++H +A + +Y ++ Sbjct: 744 GNEKLEGVEFDNVRNLYYAEKYENAITSLQEFLKSYPASKHQYDATYFIASSYDKTNRVN 803 Query: 245 EA-REVVSLIQER 256 EA + ++Q+ Sbjct: 804 EALQYYSKVVQQN 816 Score = 42.8 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 72/211 (34%), Gaps = 35/211 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A ++ ++ +++ A + + + R P + L Q+ ++ A + + Sbjct: 277 AEVYYEKGDYANAVKAYERYKRMRP-GAIPPTVALHYGHAQFRNNNFEGAITSLK----- 330 Query: 124 YPESKNVD----YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 P D Y Y++G+S + + +V+ + Y A+ Sbjct: 331 -PIGNGKDSVSQYASYILGISNLKTNSLTNALTSFGNAASLDFNPVVKE--EAAY-NHAK 386 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + +G N A KE+ Y+A Y +++H EEA + E Y Sbjct: 387 VQLELGNNADAVKELN---------NYMA----------KYPESKHTEEATELVAEGYAN 427 Query: 240 LALMDEAREVVSLIQERY--PQGYWARYVET 268 + A + + ++ R + R Sbjct: 428 ASNSSAAIKYIEALKTRNAKINSTYQRLTYN 458 Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 63/165 (38%), Gaps = 23/165 (13%) Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 ++ P + Y A KY+ A + +E++ YP SK+ Y + Sbjct: 735 LGVVRKNNPGNEKLEGVEFDNVRNLYYAEKYENAITSLQEFLKSYPASKHQYDATYFIAS 794 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 SY + R LQY S++V++ S +V A E+EIG Sbjct: 795 SYDKTNR--------VNEALQYYSKVVQQN-RSQFVGAAAQRSA---------ELEIG-- 834 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 RG + A+ F+++ N + + A L++ Y L D Sbjct: 835 ---RGNFNNAVTNFRVLSRNAENKKDQATAWTGLMDTYFTLKSYD 876 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 73/230 (31%), Gaps = 42/230 (18%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 + Y A + L+ N + A + N +P + ++ + A +A A Sbjct: 378 EEAAYNHAKVQLELGNNADAVKELNNYMAKYPESKHTEEATELVAEGYANASNSSAAIKY 437 Query: 117 GE----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-- 170 E Y ++Y Q + V ++ + ++ + ++ + Sbjct: 438 IEALKTRNAKINST--------YQR-LTYNQGV--VDFNAGRFEQAIEMFDKSLK-HPID 485 Query: 171 ------------NSPYVKGARFYVTVGRNQL---------AAKEVEIGRY-YLKRGEYVA 208 S Y NQ+ A K + Y Y + +Y Sbjct: 486 AELFNSASFYKAESVYGLKRVDEAATLYNQIAKNPKAGIYARKSLYALGYIYYNQKKYSQ 545 Query: 209 AIPRFQLVLANYSDAEH--AEEAMARLVEAYVALALMDEAREVVSLIQER 256 A+P F+ N E E+A ARL + Y+A +EA + + Sbjct: 546 ALPYFRDFTNNIEGMEADMIEDAHARLADCYLAAKNYNEAIRTYEQVAAK 595 Score = 35.9 bits (82), Expect = 6.0, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 63/213 (29%), Gaps = 38/213 (17%) Query: 45 DVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAF 102 D ++ + + + +Y + + N+ KA Y + P AG R +S A Sbjct: 113 DRFVKNHAEHPKAQLIYSDLGKYYYESGNYEKAITYLEKAVDL-PGAGAGRLESTYRLAM 171 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 ++ + A L + + N + G+ Q + Q Sbjct: 172 SYHNTKQPDLALPLFNQ-VKNEAGFDNAGDASFYAGVINYQK--------NNFEEAYQDF 222 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKE-----------------------VEIGRY 199 R +E + Y A ++ QL + + + Sbjct: 223 KR-IEDHPY--YKNEAPNWIISSLYQLKKFDELLTYGERILGSQRGNTKLDDVALYVAEV 279 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 Y ++G+Y A+ ++ A A+ Sbjct: 280 YYEKGDYANAVKAYERYKRMRPGAIPPTVALHY 312 >gi|39995134|ref|NP_951085.1| TPR domain protein [Geobacter sulfurreducens PCA] gi|39981896|gb|AAR33358.1| TPR domain protein [Geobacter sulfurreducens PCA] gi|307634644|gb|ADI82887.2| TPR domain lipoprotein [Geobacter sulfurreducens KN400] Length = 278 Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 58/159 (36%), Gaps = 8/159 (5%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 + A + +++ + T+ +Y+K + + N+ A E F + Sbjct: 128 LAKAETGIEALQKKVAEQAPSPKETEKPTPEALYQKGLDAYRAGNYGVARESFTRFLEQH 187 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 P +A + + YS K++QA +E I YP + V +++++ Sbjct: 188 PKHELAANARYWTGETYYSEKKFEQAILEFQEVIKNYPGKEKVPAAMLKQAAAFSEI--- 244 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 K + ++ + Y +S K A+ + + Sbjct: 245 -----GDAKSARFVLRKLADDYPSSEEAKRAKDRLKELK 278 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 48/141 (34%), Gaps = 22/141 (15%) Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 Y G+ + + + +R +E++ AR++ Sbjct: 157 PEALYQKGLDAYRA--------GNYGVARESFTRFLEQHPKHELAANARYW--------- 199 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 G Y ++ AI FQ V+ NY E AM + A+ + AR V+ Sbjct: 200 -----TGETYYSEKKFEQAILEFQEVIKNYPGKEKVPAAMLKQAAAFSEIGDAKSARFVL 254 Query: 251 SLIQERYPQGYWARYVETLVK 271 + + YP A+ + +K Sbjct: 255 RKLADDYPSSEEAKRAKDRLK 275 >gi|15612357|ref|NP_224010.1| hypothetical protein jhp1292 [Helicobacter pylori J99] gi|4155904|gb|AAD06874.1| putative [Helicobacter pylori J99] Length = 220 Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 73/201 (36%), Gaps = 10/201 (4%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + +K L I ++ V ++ +D Y Y+ + + N A Sbjct: 4 KHFKTFLFITMAVIVIGTGCANKKKKKDEYNKPAIFW------YQGILREILFANLETAD 57 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 Y++ + + + +++L +Y A+ +EYI ++ NVDY+ +L Sbjct: 58 NYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLK 117 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195 S+ ++ DQ + + +E+Y NS Y + + L E+ Sbjct: 118 LQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRA 175 Query: 196 IGRYYLKRGEYVAAIPRFQLV 216 I Y KR + + + Sbjct: 176 IANVYKKRHKPEGVKRYLERI 196 >gi|223039677|ref|ZP_03609963.1| putative DNA repair protein RecN [Campylobacter rectus RM3267] gi|222879060|gb|EEF14155.1| putative DNA repair protein RecN [Campylobacter rectus RM3267] Length = 215 Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 76/195 (38%), Gaps = 11/195 (5%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 L KF +FF VC + G + + L + Y + + +K ++ Sbjct: 1 MKNLIKFLSAVFF---VCLVGGCADKYTELYNL-------TPEQWYSEIIGDIKNRDLES 50 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES-KNVDYVY 134 A +++ S + + + + LL+ A + +Y A +EY+ +Y ++ ++ Sbjct: 51 ADKHYTAMSSEHVASPLLEQILLILAQAHANDEEYLMANFYLDEYLKRYGDNGLRSEFAQ 110 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 YL + +Q+ + + + + + Y N+ Y + + + + +V Sbjct: 111 YLKIKANFDSFSQPNRNQKLMQDSIAEIEKFLYIYPNTQYRPLIETMLIKFKLAIYSMDV 170 Query: 195 EIGRYYLKRGEYVAA 209 +I Y + G +A Sbjct: 171 QIADLYERTGRSESA 185 >gi|167837696|ref|ZP_02464579.1| hypothetical protein Bpse38_14500 [Burkholderia thailandensis MSMB43] Length = 249 Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T + + + A + NF A F +P + + QY+ Sbjct: 121 EGTVQPGETDAFNAASQQFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYALRD 180 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ + + + + YP+ +G + + Q+A + ++V ++ Sbjct: 181 YKGSTATWQGIVKNYPQHPRAADALIAIGTNQFEQ------GQKAA--AKKTFEQVVSQF 232 Query: 170 TNSPYVKGARFYVTVGR 186 S + A+ + + Sbjct: 233 PGSNAAETAQSKLDAIK 249 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 22/126 (17%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Q+ G ++ AA+ +I +YP+S Y +G + + R K Sbjct: 138 QFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYAL--------RDYKGSTATWQ 189 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 IV+ Y P A + IG ++G+ AA F+ V++ + + Sbjct: 190 GIVKNYPQHPRAADAL--------------IAIGTNQFEQGQKAAAKKTFEQVVSQFPGS 235 Query: 224 EHAEEA 229 AE A Sbjct: 236 NAAETA 241 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 35/109 (32%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y SPY A++++ A + +Y + Sbjct: 142 GNFKGAAASFRAFIAKYPQSPYQPTAQYWLGN-----AQYAL---------RDYKGSTAT 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q ++ NY A +A+ + A++ + ++P Sbjct: 188 WQGIVKNYPQHPRAADALIAIGTNQFEQGQKAAAKKTFEQVVSQFPGSN 236 Score = 39.3 bits (91), Expect = 0.64, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 22/59 (37%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + G + A F+ +A Y + + A L A AL + I + YPQ Sbjct: 139 FRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYALRDYKGSTATWQGIVKNYPQ 197 >gi|308062663|gb|ADO04551.1| hypothetical protein HPCU_07045 [Helicobacter pylori Cuz20] Length = 220 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 10/201 (4%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + +K L I +I V ++ +D Y Y+ + + N A Sbjct: 4 KHFKTFLFITMAIIVIGTGCTNKKKKKDEYNKPAIFW------YQGILREILFANLETAD 57 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 Y++ + + + +++L +Y A+ +EYI ++ NVDY+ +L Sbjct: 58 NYYSSLQSEHINSPLLPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLK 117 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195 S+ ++ DQ + + +E+Y NS Y + + L E+ Sbjct: 118 LQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRA 175 Query: 196 IGRYYLKRGEYVAAIPRFQLV 216 I Y KR + + + Sbjct: 176 IANVYKKRHKPEGVKRYLERI 196 >gi|308185160|ref|YP_003929293.1| hypothetical protein HPSJM_07080 [Helicobacter pylori SJM180] gi|308061080|gb|ADO02976.1| hypothetical protein HPSJM_07080 [Helicobacter pylori SJM180] gi|317014772|gb|ADU82208.1| putative lipoprotein [Helicobacter pylori Gambia94/24] Length = 220 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 73/201 (36%), Gaps = 10/201 (4%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + +K L I ++ V ++ +D Y Y+ + + N A Sbjct: 4 KHFKTFLFIAMAVIVIGTGCANKKKKKDEYNKPAIFW------YQGILREILFANLETAD 57 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 Y++ + + + +++L +Y A+ +EYI ++ NVDY+ +L Sbjct: 58 NYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLK 117 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195 S+ ++ DQ + + +E+Y NS Y + + L E+ Sbjct: 118 LQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRA 175 Query: 196 IGRYYLKRGEYVAAIPRFQLV 216 I Y KR + + + Sbjct: 176 IANVYKKRHKPEGVKRYLERI 196 >gi|83815162|ref|YP_445705.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855] gi|83756556|gb|ABC44669.1| Tetratricopeptide repeat family [Salinibacter ruber DSM 13855] Length = 1064 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 88/256 (34%), Gaps = 35/256 (13%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 +A L + + + + + ++KA + + +A F + P Sbjct: 470 LATDNLDSALDAYTEAIDRGAAPESVTAKVRFQKAWSLYRNGRYGEAGTEFQALADAHPE 529 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 +++L Y +Y A + Y+ P++ Y + +Y + Sbjct: 530 TARGQEALFWGGDTFYQREQYGAARRQFQAYLDTSPDAPQRAGARYALAWTYFK------ 583 Query: 150 YDQRATKLMLQYMSRIVERY-----TNSPYVKGARFYVTVGRNQL--------------- 189 QR + + R ++ Y ++ PY + AR + L Sbjct: 584 --QRRFEPAARSFRRFLDVYDRDSMSDVPYRQDARLRLADCYFALKRYDDARAAYDRVDG 641 Query: 190 AAKEVEI-----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 A E + YY G+ AA R + + ++ D+ +A+ RL + + + Sbjct: 642 AGVEYALYQGGRALYYA--GQPGAARDRLRRFVDDFPDSPLRPDALYRLGDIHFQEQRYE 699 Query: 245 EAREVVSLIQERYPQG 260 AR+ + + + +P+ Sbjct: 700 AARDAFTQLLDDHPET 715 Score = 67.8 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 78/236 (33%), Gaps = 34/236 (14%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + V + +Y +A L + + + ++ R++P AR + L A G Sbjct: 123 ASHVAAPQALYLEARAALAQGDDAGTRRLLSRLQREYPSHPRARTARLGLAQYYLDQGNP 182 Query: 111 QQAASLGEEYITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 +A S + I P + YL+G +Q L Y ++ RY Sbjct: 183 DRAKSQLQ-TIATAPSRPDEGAQALYLLG--------RTEQNQGNPNAALPYFKQVYSRY 233 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRY-----------------------YLKRGEY 206 N+ A + V + +L + + Y + G+Y Sbjct: 234 PNAELAPAALYARGVTQVRLERYDRATASFERLGEQFPDSPFSENLGTILGEVYYRVGQY 293 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 A Q L + + + A + L E Y AL ++A LI E P + Sbjct: 294 ENAATELQRRLPDLTGSTRA-RTLFLLGETYSALGRREDATTQYRLILEELPNSSY 348 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 73/242 (30%), Gaps = 31/242 (12%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D V + +Y+ A + + DFP + + +L + + Sbjct: 637 DRVDGAGVEYALYQGGRALYYAGQPGAARDRLRRFVDDFPDSPLRPDALYRLGDIHFQEQ 696 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y+ A + + +PE+ Y +G ++ K +Q ++E Sbjct: 697 RYEAARDAFTQLLDDHPETARAAEAQYAIGDTHYNA--------GEMKDAVQAYRAVLET 748 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKE-----------------------VEIGRYYLKRGE 205 Y SP A + N ++ R +RG+ Sbjct: 749 YPESPSASEAASSLFFALNAAGQQDRADKLIAAIANRVPDANMEDRLRYHRARAAYQRGD 808 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 A+ F+ + S +A L Y +EA+ + + ++YP + Sbjct: 809 SKRALRLFRTFVRTTSTEARVPDAYYYLGLLYADTDQYEEAKNYLRQLTDQYPDSEYLSD 868 Query: 266 VE 267 Sbjct: 869 AS 870 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 70/240 (29%), Gaps = 47/240 (19%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G R R D +Y + +EQ + A + F Q D P A ++ Sbjct: 662 GAARDRLRRFVDDFPDSPLRPDALYRLGDIHFQEQRYEAARDAFTQLLDDHPETARAAEA 721 Query: 97 LLMSAFVQYSAGKYQQAASLGEE------------------YITQYPESKNVDYVYYLVG 138 Y+AG+ + A + + D L+ Sbjct: 722 QYAIGDTHYNAGEMKDAVQAYRAVLETYPESPSASEAASSLFFALNAAGQQ-DRADKLIA 780 Query: 139 MSYAQMIRDVP-------------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + A + D Y + +K L+ V + V A +Y+ + Sbjct: 781 -AIANRVPDANMEDRLRYHRARAAYQRGDSKRALRLFRTFVRTTSTEARVPDAYYYLGLL 839 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 Y +Y A + + Y D+E+ +A RL E Y+ ++ Sbjct: 840 --------------YADTDQYEEAKNYLRQLTDQYPDSEYLSDASLRLGEIYLEEGANEQ 885 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 57/183 (31%), Gaps = 22/183 (12%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 D D + Y ++ L+ S A +Q P + + L V+ Sbjct: 895 EQDDTRDELRAQARYGQSQALLQLGRTSAADTLLSQILEAEPQGPLRNAARLGLGRVREE 954 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 G+ +A L I + + Y +G + +R Q + ++ + R+ Sbjct: 955 QGRTDEALDLYRRVIRA-SDGETGAEALYRLG----RQLRR----QGNPQTAIRELERMP 1005 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + P AR + R Y RGE A+ + V Y A Sbjct: 1006 SLFAGHP-EWEARALLEQ------------ARAYRARGETGQAVQLYDEVQQAYGGTPFA 1052 Query: 227 EEA 229 E A Sbjct: 1053 ETA 1055 >gi|208435271|ref|YP_002266937.1| competence lipoprotein [Helicobacter pylori G27] gi|208433200|gb|ACI28071.1| competence lipoprotein [Helicobacter pylori G27] Length = 220 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 10/201 (4%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + +K L I +I V ++ +D Y Y+ + + N A Sbjct: 4 KHFKTFLFITMAIIVIGTGCANKKKKKDEYNKPAIFW------YQGILREILFANLETAD 57 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 Y++ + + + +++L +Y A+ +EYI ++ NVDY+ +L Sbjct: 58 NYYSSLQSEHINSPLVPEAMLALGQAHMKKREYVLASFYFDEYIKRFGTKDNVDYLTFLK 117 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195 S+ ++ DQ + + +E+Y NS Y + + L E+ Sbjct: 118 LQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRA 175 Query: 196 IGRYYLKRGEYVAAIPRFQLV 216 I Y KR + + + Sbjct: 176 IANVYKKRHKPEGVKRYLERI 196 >gi|110597344|ref|ZP_01385632.1| putative lipoprotein [Chlorobium ferrooxidans DSM 13031] gi|110341180|gb|EAT59648.1| putative lipoprotein [Chlorobium ferrooxidans DSM 13031] Length = 284 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 72/232 (31%), Gaps = 39/232 (16%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G+ T E Y KA +++++ A + Sbjct: 4 GYFSAVGVSSTKPPATVTALVNEGYAKAERLFAKKDYTGASLALESLIFTSRATALEDDV 63 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L + A Y + +Y A + + Q P + +++ SY Q+ DQ+ T Sbjct: 64 LFLLAQSYYRSKEYLLAGDIYSRLLQQMPSTPYAKTAQFMLAKSYEQLSPHYELDQQYTV 123 Query: 157 LMLQYMSRIVERYTNSP---------------------------YVKGARFY-------- 181 + S ++ Y + Y + + Y Sbjct: 124 KAIDQFSVYLDLYPVTDSLKISNEVDTYRELLKINPDNQSYKESYARASAQYARVDTVRY 183 Query: 182 ----VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 + R +LA I R Y++ G+Y AA + V+ +SD + ++ Sbjct: 184 AARTIKEFREKLARNSFSIARNYVQLGKYKAAEIFYDEVIRRFSDTGYIHQS 235 >gi|152991092|ref|YP_001356814.1| hypothetical protein NIS_1349 [Nitratiruptor sp. SB155-2] gi|151422953|dbj|BAF70457.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 212 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 79/190 (41%), Gaps = 16/190 (8%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 T+ +A C SS+++ + D+ + Y+K V ++ + KA EYF Sbjct: 7 CIATLALLLAGC--------SSKNISEYNKPDIYW----YQKMVRYVSTSDLDKADEYFT 54 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + + + ++++L+ A +Y A +E+I +Y KNV + +L + Sbjct: 55 SLQSEHFSSPLLKEAMLIMAQAHMDNEEYLMAKYYLDEFIKRYGNDKNVAFAKFLKIKAS 114 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--EIGRY 199 R++ DQ+ + + + + + Y+ +T +A + EI Sbjct: 115 FLAFRNINRDQKLLQDTIAEAESYKKEFIENEYMPMVDTMLTKLY--MAEYVLNEEIVAL 172 Query: 200 YLKRGEYVAA 209 Y +RG+ AA Sbjct: 173 YERRGKMKAA 182 >gi|283780564|ref|YP_003371319.1| hypothetical protein Psta_2793 [Pirellula staleyi DSM 6068] gi|283439017|gb|ADB17459.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068] Length = 2545 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 71/228 (31%), Gaps = 32/228 (14%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 R+V D R Y + + +A ++ R FP +A + A Sbjct: 2322 REVMEDYPDPKYAPRVAYLLGQFAQELSQWDEAIRSYDMILRQFPDHTLAPDAQYKLAQC 2381 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 AG + QA +P+S + V I D Y + Q Sbjct: 2382 YEEAGDFDQALEAYVTLAATHPKSPLIPNV--------MIRISDYFYKAEKFDIAAQVGE 2433 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 + +ER+ + +LA +G+ Y K +Y A F + D Sbjct: 2434 KFLERFEGHQHAP-----------RLA---FRVGQCYYKSKQYATAGKSFDQFSKLFPDD 2479 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQER-----YPQGYWARYV 266 +A+ E++ + EA I+ Y + A+Y Sbjct: 2480 ALGADALFWSGESFRLGGNLREA-----FIRYNNCRWKYAESEAAKYA 2522 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 48/133 (36%), Gaps = 20/133 (15%) Query: 135 YLVGMSYAQMIRD---VPYDQ---RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + SY ++ + + D + + + ++E Y + Y V Q Sbjct: 2288 FRIAESYFELFKSHKTLERDDEKKTDLEAGRRILREVMEDYPDPKYAP----RVAYLLGQ 2343 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 A E+ ++ AI + ++L + D A +A +L + Y D+A E Sbjct: 2344 FAQ-ELS---------QWDEAIRSYDMILRQFPDHTLAPDAQYKLAQCYEEAGDFDQALE 2393 Query: 249 VVSLIQERYPQGY 261 + +P+ Sbjct: 2394 AYVTLAATHPKSP 2406 Score = 43.2 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 54/160 (33%), Gaps = 26/160 (16%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 + L+ A + ++ A S + +YP + + +G ++ Q+ Sbjct: 976 QMQLLLAKNFFKGQRFDIARSEFTTVVNRYPGTPQATEAEFGIGETFMS--------QKV 1027 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 ++ S V R LA +RG+ A F+ Sbjct: 1028 YDQAELVFEKLAR----STEV-DVVVRAEFLRGVLA----------FRRGDRDEARDIFR 1072 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 VL + E A +A+ L E Y ++ + ++L++ Sbjct: 1073 AVLERVPNVELANQALFNLAEVY---GAEEKYIDQLNLLR 1109 >gi|53720376|ref|YP_109362.1| hypothetical protein BPSL2766 [Burkholderia pseudomallei K96243] gi|67643928|ref|ZP_00442671.1| tol-pal system protein YbgF [Burkholderia mallei GB8 horse 4] gi|76809959|ref|YP_334630.1| TPR repeat-containing protein [Burkholderia pseudomallei 1710b] gi|121598217|ref|YP_992165.1| hypothetical protein BMASAVP1_A0825 [Burkholderia mallei SAVP1] gi|124384460|ref|YP_001028611.1| hypothetical protein BMA10229_A2659 [Burkholderia mallei NCTC 10229] gi|126439148|ref|YP_001060217.1| tol-pal system protein YbgF [Burkholderia pseudomallei 668] gi|126449408|ref|YP_001081488.1| tol-pal system protein YbgF [Burkholderia mallei NCTC 10247] gi|126455302|ref|YP_001067481.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1106a] gi|134280274|ref|ZP_01766985.1| tol-pal system protein YbgF [Burkholderia pseudomallei 305] gi|166998278|ref|ZP_02264138.1| tol-pal system protein YbgF [Burkholderia mallei PRL-20] gi|167720992|ref|ZP_02404228.1| tol-pal system protein YbgF [Burkholderia pseudomallei DM98] gi|167739949|ref|ZP_02412723.1| tol-pal system protein YbgF [Burkholderia pseudomallei 14] gi|167817186|ref|ZP_02448866.1| tol-pal system protein YbgF [Burkholderia pseudomallei 91] gi|167825599|ref|ZP_02457070.1| tol-pal system protein YbgF [Burkholderia pseudomallei 9] gi|167847083|ref|ZP_02472591.1| tol-pal system protein YbgF [Burkholderia pseudomallei B7210] gi|167895667|ref|ZP_02483069.1| tol-pal system protein YbgF [Burkholderia pseudomallei 7894] gi|167904060|ref|ZP_02491265.1| tol-pal system protein YbgF [Burkholderia pseudomallei NCTC 13177] gi|167912317|ref|ZP_02499408.1| tol-pal system protein YbgF [Burkholderia pseudomallei 112] gi|167920274|ref|ZP_02507365.1| tol-pal system protein YbgF [Burkholderia pseudomallei BCC215] gi|217420754|ref|ZP_03452259.1| tol-pal system protein YbgF [Burkholderia pseudomallei 576] gi|226194262|ref|ZP_03789861.1| tol-pal system protein YbgF [Burkholderia pseudomallei Pakistan 9] gi|237813607|ref|YP_002898058.1| tol-pal system protein YbgF [Burkholderia pseudomallei MSHR346] gi|242316228|ref|ZP_04815244.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1106b] gi|254175753|ref|ZP_04882413.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399] gi|254180822|ref|ZP_04887420.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1655] gi|254191660|ref|ZP_04898163.1| tol-pal system protein YbgF [Burkholderia pseudomallei Pasteur 52237] gi|254194894|ref|ZP_04901324.1| tol-pal system protein YbgF [Burkholderia pseudomallei S13] gi|254202359|ref|ZP_04908722.1| tol-pal system protein YbgF [Burkholderia mallei FMH] gi|254207693|ref|ZP_04914043.1| tol-pal system protein YbgF [Burkholderia mallei JHU] gi|254258392|ref|ZP_04949446.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1710a] gi|254299067|ref|ZP_04966517.1| tol-pal system protein YbgF [Burkholderia pseudomallei 406e] gi|254356405|ref|ZP_04972681.1| tol-pal system protein YbgF [Burkholderia mallei 2002721280] gi|52210790|emb|CAH36774.1| putative exported protein [Burkholderia pseudomallei K96243] gi|76579412|gb|ABA48887.1| TPR repeat [Burkholderia pseudomallei 1710b] gi|121227027|gb|ABM49545.1| conserved hypothetical protein [Burkholderia mallei SAVP1] gi|124292480|gb|ABN01749.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229] gi|126218641|gb|ABN82147.1| tol-pal system protein YbgF [Burkholderia pseudomallei 668] gi|126228944|gb|ABN92484.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1106a] gi|126242278|gb|ABO05371.1| tol-pal system protein YbgF [Burkholderia mallei NCTC 10247] gi|134248281|gb|EBA48364.1| tol-pal system protein YbgF [Burkholderia pseudomallei 305] gi|147746606|gb|EDK53683.1| tol-pal system protein YbgF [Burkholderia mallei FMH] gi|147751587|gb|EDK58654.1| tol-pal system protein YbgF [Burkholderia mallei JHU] gi|148025402|gb|EDK83556.1| tol-pal system protein YbgF [Burkholderia mallei 2002721280] gi|157809264|gb|EDO86434.1| tol-pal system protein YbgF [Burkholderia pseudomallei 406e] gi|157939331|gb|EDO95001.1| tol-pal system protein YbgF [Burkholderia pseudomallei Pasteur 52237] gi|160696797|gb|EDP86767.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399] gi|169651643|gb|EDS84336.1| tol-pal system protein YbgF [Burkholderia pseudomallei S13] gi|184211361|gb|EDU08404.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1655] gi|217396166|gb|EEC36183.1| tol-pal system protein YbgF [Burkholderia pseudomallei 576] gi|225933727|gb|EEH29715.1| tol-pal system protein YbgF [Burkholderia pseudomallei Pakistan 9] gi|237502979|gb|ACQ95297.1| tol-pal system protein YbgF [Burkholderia pseudomallei MSHR346] gi|238525397|gb|EEP88825.1| tol-pal system protein YbgF [Burkholderia mallei GB8 horse 4] gi|242139467|gb|EES25869.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1106b] gi|243065358|gb|EES47544.1| tol-pal system protein YbgF [Burkholderia mallei PRL-20] gi|254217081|gb|EET06465.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1710a] Length = 249 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 44/137 (32%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T + + + A + NF A F +P + + QY+ Sbjct: 121 EGTVQPGETDAFNAASQQFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYALRD 180 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ + + + + YP+ +G + Q+A + ++V ++ Sbjct: 181 YKGSTATWQGLVKNYPQHPRAADALIAIG------TNQLEQGQKAA--AKKTFEQVVSQF 232 Query: 170 TNSPYVKGARFYVTVGR 186 S + A+ + + Sbjct: 233 PGSNAAETAQSKLDAIK 249 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 22/126 (17%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Q+ G ++ AA+ +I +YP+S Y +G + + R K Sbjct: 138 QFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYAL--------RDYKGSTATWQ 189 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 +V+ Y P A + IG L++G+ AA F+ V++ + + Sbjct: 190 GLVKNYPQHPRAADAL--------------IAIGTNQLEQGQKAAAKKTFEQVVSQFPGS 235 Query: 224 EHAEEA 229 AE A Sbjct: 236 NAAETA 241 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 36/109 (33%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y SPY A++++ + L +Y + Sbjct: 142 GNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYAL--------------RDYKGSTAT 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q ++ NY A +A+ + + A++ + ++P Sbjct: 188 WQGLVKNYPQHPRAADALIAIGTNQLEQGQKAAAKKTFEQVVSQFPGSN 236 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 22/59 (37%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + G + A F+ +A Y + + A L A AL + + + YPQ Sbjct: 139 FRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYALRDYKGSTATWQGLVKNYPQ 197 >gi|157736844|ref|YP_001489527.1| hypothetical protein Abu_0591 [Arcobacter butzleri RM4018] gi|157698698|gb|ABV66858.1| conserved hypothetical membrane protein [Arcobacter butzleri RM4018] Length = 226 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 68/178 (38%), Gaps = 10/178 (5%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 C + SS+ + + + Y K + + + +A + + + + Sbjct: 24 CATFVFTGCSSKSEQEYNKPALYW----YNKMMKQIASGDLDEADDTYTSLESEHRNSPY 79 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 ++++ +Y A +EYI ++ SK++DY YL + + DQ Sbjct: 80 IPTAIMILVNAHIEEEEYALANFYLDEYIKKFGLSKDIDYARYLKIKANFLGFKYQFRDQ 139 Query: 153 RATKLMLQYMSRIVERYTNSPY---VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 + L + E+Y NSPY V + + + A+ + EI Y +R + + Sbjct: 140 QLIDDTLSQIQEFKEKYKNSPYMPLVDTINSRLYMSK---ASFDQEISELYTRRDKPL 194 >gi|134095586|ref|YP_001100661.1| putative transmembrane protein [Herminiimonas arsenicoxydans] gi|133739489|emb|CAL62540.1| Conserved hypothetical protein; putative TPR repeat [Herminiimonas arsenicoxydans] Length = 245 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 53/128 (41%), Gaps = 8/128 (6%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ +Y+ A+ K ++ K+ F + +P + A + Y+ Y+ A + Sbjct: 123 SEQRMYDNALALFKAGDYKKSGTAFADFIQRYPQSAYAPSAQYWIGNAYYAQRDYRNAIT 182 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + +YP + + SY ++ D+ A K L+ +V +Y N+P Sbjct: 183 AQQALLKKYPANPKAADAMLNIASSYTEL-----KDRTAAKKALES---LVAQYPNTPAA 234 Query: 176 KGARFYVT 183 + A+ + Sbjct: 235 QTAKERLA 242 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 57/145 (39%), Gaps = 22/145 (15%) Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 ++ + + +A + AG Y+++ + ++I +YP+S Y +G +Y Sbjct: 121 ELSEQRMYDNALALFKAGDYKKSGTAFADFIQRYPQSAYAPSAQYWIGNAYYA------- 173 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 QR + + ++++Y +P A + I Y + + AA Sbjct: 174 -QRDYRNAITAQQALLKKYPANPKAADAM--------------LNIASSYTELKDRTAAK 218 Query: 211 PRFQLVLANYSDAEHAEEAMARLVE 235 + ++A Y + A+ A RL Sbjct: 219 KALESLVAQYPNTPAAQTAKERLAN 243 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + ++RY S Y A+++ IG Y + +Y AI Sbjct: 138 GDYKKSGTAFADFIQRYPQSAYAPSAQYW--------------IGNAYYAQRDYRNAITA 183 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Q +L Y A +AM + +Y L A++ + + +YP Sbjct: 184 QQALLKKYPANPKAADAMLNIASSYTELKDRTAAKKALESLVAQYPNTP 232 >gi|315636013|ref|ZP_07891272.1| competence lipoprotein [Arcobacter butzleri JV22] gi|315479669|gb|EFU70343.1| competence lipoprotein [Arcobacter butzleri JV22] Length = 223 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 68/178 (38%), Gaps = 10/178 (5%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 C + SS+ + + + Y K + + + +A + + + + Sbjct: 21 CATFVFTGCSSKSEQEYNKPALYW----YNKMMKQIASGDLDEADDTYTSLESEHRNSPY 76 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 ++++ +Y A +EYI ++ SK++DY YL + + DQ Sbjct: 77 IPTAIMILVNAHIEEEEYALANFYLDEYIKKFGLSKDIDYARYLKIKANFLGFKYQFRDQ 136 Query: 153 RATKLMLQYMSRIVERYTNSPY---VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 + L + E+Y NSPY V + + + A+ + EI Y +R + + Sbjct: 137 QLIDDTLSQIQEFKEKYKNSPYMPLVDTINSRLYMSK---ASFDQEISELYTRRDKPL 191 >gi|167563921|ref|ZP_02356837.1| hypothetical protein BoklE_15300 [Burkholderia oklahomensis EO147] gi|167571056|ref|ZP_02363930.1| hypothetical protein BoklC_14510 [Burkholderia oklahomensis C6786] Length = 249 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 44/137 (32%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T + + + A + NF A F +P + + QY+ Sbjct: 121 EGTVQPGETDAFNAASQQFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYALRD 180 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ + + + + YP+ +G + Q+A + ++V ++ Sbjct: 181 YKGSTATWQGLVKNYPQHPRAADALIAIG------TNQLEQGQKAA--AKKTFEQVVSQF 232 Query: 170 TNSPYVKGARFYVTVGR 186 S + A+ + + Sbjct: 233 PGSNAAETAQSKLDAIK 249 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 22/126 (17%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Q+ G ++ AA+ +I +YP+S Y +G + + R K Sbjct: 138 QFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYAL--------RDYKGSTATWQ 189 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 +V+ Y P A + IG L++G+ AA F+ V++ + + Sbjct: 190 GLVKNYPQHPRAADAL--------------IAIGTNQLEQGQKAAAKKTFEQVVSQFPGS 235 Query: 224 EHAEEA 229 AE A Sbjct: 236 NAAETA 241 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 36/109 (33%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y SPY A++++ + L +Y + Sbjct: 142 GNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYAL--------------RDYKGSTAT 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q ++ NY A +A+ + + A++ + ++P Sbjct: 188 WQGLVKNYPQHPRAADALIAIGTNQLEQGQKAAAKKTFEQVVSQFPGSN 236 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 22/59 (37%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + G + A F+ +A Y + + A L A AL + + + YPQ Sbjct: 139 FRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYALRDYKGSTATWQGLVKNYPQ 197 >gi|261749495|ref|YP_003257181.1| hypothetical protein BPLAN_424 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497588|gb|ACX84038.1| conserved hypothetical protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 227 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 50/131 (38%), Gaps = 4/131 (3%) Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + G + + DQ T+ + +++ + +Y NS ++ R + ++ ++ Sbjct: 80 LFKRGFNEFIHSLNFDLDQTKTRAAINTLNQFITKYPNSQKIQEIRNIIVKLIKKIEKRD 139 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR----EV 249 I Y +Y AA F+ + Y + + E+A+ ++ +A E E Sbjct: 140 YYIANTYFIMRKYKAASIYFKDFIKKYPKSIYKEKALYKICIITYKMADNKEKALDFFEA 199 Query: 250 VSLIQERYPQG 260 + YP Sbjct: 200 YQRYVKLYPDS 210 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 27/71 (38%), Gaps = 4/71 (5%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-QQAAS---L 116 Y A + + + A YF + +P + K+L + Y ++A Sbjct: 140 YYIANTYFIMRKYKAASIYFKDFIKKYPKSIYKEKALYKICIITYKMADNKEKALDFFEA 199 Query: 117 GEEYITQYPES 127 + Y+ YP+S Sbjct: 200 YQRYVKLYPDS 210 Score = 38.6 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 53/157 (33%), Gaps = 27/157 (17%) Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLF--------LKEQNFSKAYEYFNQCSRDFPF 89 W S +D+ + + R ++++ L + A NQ +P Sbjct: 59 WNFFSKKDLSNSNGPNSEENR-LFKRGFNEFIHSLNFDLDQTKTRAAINTLNQFITKYPN 117 Query: 90 AGVARKSL--------------LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 + ++ A + KY+ A+ +++I +YP+S + Y Sbjct: 118 SQKIQEIRNIIVKLIKKIEKRDYYIANTYFIMRKYKAASIYFKDFIKKYPKSIYKEKALY 177 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + + +M + + + R V+ Y +S Sbjct: 178 KICIITYKMADN----KEKALDFFEAYQRYVKLYPDS 210 >gi|298737038|ref|YP_003729568.1| hypothetical protein HPB8_1547 [Helicobacter pylori B8] gi|298356232|emb|CBI67104.1| conserved hypothetical protein [Helicobacter pylori B8] Length = 220 Score = 73.6 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 73/201 (36%), Gaps = 10/201 (4%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + +K L I ++ V ++ +D Y Y+ + + N A Sbjct: 4 KYFKTFLFIAMAMIVIGTGCANKKKKKDEYNKPAIFW------YQGILREILFANLETAD 57 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 Y++ + + + +++L +Y A+ +EYI ++ NVDY+ +L Sbjct: 58 NYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFLK 117 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-- 195 S+ ++ DQ + + +E+Y NS Y + + L E+ Sbjct: 118 LQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRA 175 Query: 196 IGRYYLKRGEYVAAIPRFQLV 216 I Y KR + + + Sbjct: 176 IANVYKKRHKPEGVKRYLERI 196 >gi|53725633|ref|YP_103662.1| hypothetical protein BMA2083 [Burkholderia mallei ATCC 23344] gi|52429056|gb|AAU49649.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344] Length = 234 Score = 73.2 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 44/137 (32%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T + + + A + NF A F +P + + QY+ Sbjct: 106 EGTVQPGETDAFNAASQQFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYALRD 165 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ + + + + YP+ +G + Q+A + ++V ++ Sbjct: 166 YKGSTATWQGLVKNYPQHPRAADALIAIG------TNQLEQGQKAA--AKKTFEQVVSQF 217 Query: 170 TNSPYVKGARFYVTVGR 186 S + A+ + + Sbjct: 218 PGSNAAETAQSKLDAIK 234 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 22/126 (17%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Q+ G ++ AA+ +I +YP+S Y +G + + R K Sbjct: 123 QFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYAL--------RDYKGSTATWQ 174 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 +V+ Y P A + IG L++G+ AA F+ V++ + + Sbjct: 175 GLVKNYPQHPRAADAL--------------IAIGTNQLEQGQKAAAKKTFEQVVSQFPGS 220 Query: 224 EHAEEA 229 AE A Sbjct: 221 NAAETA 226 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 36/109 (33%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y SPY A++++ + L +Y + Sbjct: 127 GNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYAL--------------RDYKGSTAT 172 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q ++ NY A +A+ + + A++ + ++P Sbjct: 173 WQGLVKNYPQHPRAADALIAIGTNQLEQGQKAAAKKTFEQVVSQFPGSN 221 Score = 39.3 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 22/59 (37%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + G + A F+ +A Y + + A L A AL + + + YPQ Sbjct: 124 FRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYALRDYKGSTATWQGLVKNYPQ 182 >gi|298372047|ref|ZP_06982037.1| TPR-domain containing protein [Bacteroidetes oral taxon 274 str. F0058] gi|298274951|gb|EFI16502.1| TPR-domain containing protein [Bacteroidetes oral taxon 274 str. F0058] Length = 999 Score = 73.2 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 75/203 (36%), Gaps = 26/203 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y + ++ + A ++F+Q P + + +L + ++ A Sbjct: 498 YTAGYSYFYQEQWDNARQWFSQYLAKEPDKKSNLYYDALNRIGDCYFYRRDFRNAVDAYS 557 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + S +VDY Y I+ + Q+ + + R++++Y NS Y A Sbjct: 558 KVSGSN--STDVDYALYQKA-----FIKGL---QKKYGEEIADLQRLIKKYPNSVYAPKA 607 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + EIGR Y+ + +Y AI + VL NY A +A+ Y Sbjct: 608 Q--------------YEIGRAYVLQNKYSKAIEEYNTVLTNYPQTPIARKAILETGMLYE 653 Query: 239 ALALMDEAREVVSLIQERYPQGY 261 + D+A + E+YP Sbjct: 654 NMGQTDKAIAAYKNVVEKYPGSE 676 Score = 59.7 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 73/225 (32%), Gaps = 39/225 (17%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y+KA + ++ + + + + +P + A K+ KY +A Sbjct: 571 LYQKAFIKGLQKKYGEEIADLQRLIKKYPNSVYAPKAQYEIGRAYVLQNKYSKAIEEYNT 630 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +T YP++ GM Y M T + +VE+Y S A Sbjct: 631 VLTNYPQTPIARKAILETGMLYENM--------GQTDKAIAAYKNVVEKYPGSEQTNVAL 682 Query: 180 FYVTVGR----------------------NQLAAKE-----VEIGRYYLKRGEYVAAIPR 212 + N A+KE + R Y K+ Y AA Sbjct: 683 ESIQNLYVDKNDVASYVNYSKSLGTTTVSNVSASKEDSLSYIAAERVYAKKD-YKAAADS 741 Query: 213 FQLVLANY---SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 ++ L+ + ++ ++ A L E+Y M+ A + Sbjct: 742 WESYLSKFCKNNNTQNCINATYYLAESYYETKNMNMALSQYRALA 786 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 81/232 (34%), Gaps = 33/232 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ V + E+ +++A +Y +Q + +++ L + +Y +A + Sbjct: 421 LFRLGVNYFNERQYTQAEDYLSQSIALNNSQSITQQAYLFRGETHFRQKEYNKAIDDLKT 480 Query: 120 YITQYPESKNVD--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175 + T+ + +Y G SY Q Q+ S+ + + + S Sbjct: 481 FTTKNKNNNTAAASKAFYTAGYSYFY--------QEQWDNARQWFSQYLAKEPDKKSNLY 532 Query: 176 KGARFYVTVG-------RNQLAAKEVEIG------RY--YLK------RGEYVAAIPRFQ 214 A + RN + A G Y Y K + +Y I Q Sbjct: 533 YDALNRIGDCYFYRRDFRNAVDAYSKVSGSNSTDVDYALYQKAFIKGLQKKYGEEIADLQ 592 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 ++ Y ++ +A +A + AYV +A E + + YPQ AR Sbjct: 593 RLIKKYPNSVYAPKAQYEIGRAYVLQNKYSKAIEEYNTVLTNYPQTPIARKA 644 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 64/201 (31%), Gaps = 37/201 (18%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAASLGEE 119 E+N+ A Y +A A K F Y A KY +A + Sbjct: 242 GEASYNEKNYKDAITYLTL------YAKNASKVQREDMFILGISLYKANKYAEAIQYLSK 295 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 T+ + + + Y+ +G ++ D + K+ S Y G Sbjct: 296 ATTK--DDELAENAYFTIGQCALKI-----NDIQQAKMAF-----------KSAYSTGFS 337 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGE-YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + A I Y + G + F L Y ++HA+E + L AY+ Sbjct: 338 KKIRE----EALYNYAIATY--RTGSVFGETTKAFDTFLNEYPLSKHADEILNLLATAYI 391 Query: 239 ALALMDEAREVVSLIQERYPQ 259 EA + ++ I P Sbjct: 392 TEGNYAEALKAINSI--NNPN 410 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 83/254 (32%), Gaps = 30/254 (11%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQN-FSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 + Y + + +Y A+ + + F + + F+ ++P + A + L + A Sbjct: 329 KSAYSTGFSKKIREEALYNYAIATYRTGSVFGETTKAFDTFLNEYPLSKHADEILNLLAT 388 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNV---DYVYYLVGMSYAQ------------MIRD 147 + G Y +A P K V +YV + +G++Y Sbjct: 389 AYITEGNYAEALKAINS--INNPNQKIVQAKEYVLFRLGVNYFNERQYTQAEDYLSQSIA 446 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPY---VKGARFYVTVGRN---QLAAKEVEIGRY-Y 200 + Q T+ + + Y + + + T +N A+K Y Y Sbjct: 447 LNNSQSITQQAYLFRGE--THFRQKEYNKAIDDLKTFTTKNKNNNTAAASKAFYTAGYSY 504 Query: 201 LKRGEYVAAIPRFQLVLANYSD--AEHAEEAMARLVEAY-VALALMDEAREVVSLIQERY 257 + ++ A F LA D + +A+ R+ + Y + + Sbjct: 505 FYQEQWDNARQWFSQYLAKEPDKKSNLYYDALNRIGDCYFYRRDFRNAVDAYSKVSGSNS 564 Query: 258 PQGYWARYVETLVK 271 +A Y + +K Sbjct: 565 TDVDYALYQKAFIK 578 >gi|78189867|ref|YP_380205.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3] gi|78172066|gb|ABB29162.1| TPR repeat [Chlorobium chlorochromatii CaD3] Length = 287 Score = 73.2 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 8/135 (5%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 ++ ++++ V ++N+ A + F + FP + + + A +S Sbjct: 161 VEPTPATVNDASMFQEGVTLFGKKNYGAARQTFMALIKRFPTSLLVGDAQFYIADSFFSE 220 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y+QA +E I +YP++ Y S ++I DV +V Sbjct: 221 KRYEQAIVEYQEVIAKYPKNSKRPAALYRQARS-FELIGDVA-------NAKTRYKDVVN 272 Query: 168 RYTNSPYVKGARFYV 182 Y SP A+ + Sbjct: 273 VYPTSPEAALAKKKL 287 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 34/109 (31%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + Q +++R+ S V A+ I + Y AI Sbjct: 184 KNYGAARQTFMALIKRFPTSLLVGDAQ--------------FYIADSFFSEKRYEQAIVE 229 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q V+A Y A+ R ++ + + A+ + YP Sbjct: 230 YQEVIAKYPKNSKRPAALYRQARSFELIGDVANAKTRYKDVVNVYPTSP 278 >gi|73541317|ref|YP_295837.1| transmembrane protein [Ralstonia eutropha JMP134] gi|72118730|gb|AAZ60993.1| probable transmembrane protein [Ralstonia eutropha JMP134] Length = 284 Score = 73.2 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 19/145 (13%), Positives = 51/145 (35%), Gaps = 11/145 (7%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 S+ D S + + Y+ A+ + +F A F+ + +P + + Sbjct: 151 SAEDRQGTSAPGEKPE---YDAALRHFQAGDFKSAGNSFSSFIKKYPQSPYVPLAQYWLG 207 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 Y+ Y+ + + ++ I P V ++ ++ Q+ Q+ + Sbjct: 208 NSLYAQRDYKGSTWVLQQMIHANPTHPKVPDA--MIAVANNQLESG----QKPA--ARKT 259 Query: 162 MSRIVERYTNSPYVKGARFYVTVGR 186 + ++V +Y + + A + Sbjct: 260 LEQVVAKYPGTEGARTANNRLKTLH 284 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K S +++Y SPYV A++++ + R Y K +V Sbjct: 177 GDFKSAGNSFSSFIKKYPQSPYVPLAQYWL--------GNSLYAQRDY-KGSTWV----- 222 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Q ++ +AM + + AR+ + + +YP AR +K Sbjct: 223 LQQMIHANPTHPKVPDAMIAVANNQLESGQKPAARKTLEQVVAKYPGTEGARTANNRLK 281 >gi|113868783|ref|YP_727272.1| hypothetical protein H16_A2827 [Ralstonia eutropha H16] gi|113527559|emb|CAJ93904.1| hypothetical membrane associated protein [Ralstonia eutropha H16] Length = 252 Score = 73.2 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 47/126 (37%), Gaps = 8/126 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A+ + +F A F+ + +P + + Y+ Y+ + S+ + Sbjct: 135 YDAALKQFQAGDFKSAGSSFSAFVKKYPQSPYVPLAQYWLGNSLYAQRDYKGSTSVLQTM 194 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I P V ++ ++ Q+ Q+A + + ++V +Y + + A Sbjct: 195 INNNPTHPKVPDA--MIAVANNQLESG----QKAA--ARKTLEQVVAKYPGTEGAQAASN 246 Query: 181 YVTVGR 186 + + Sbjct: 247 RLKTLK 252 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 53/140 (37%), Gaps = 22/140 (15%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 K +A Q+ AG ++ A S ++ +YP+S V Y +G S QR Sbjct: 131 EKPEYDAALKQFQAGDFKSAGSSFSAFVKKYPQSPYVPLAQYWLGNSLYA--------QR 182 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 K + ++ P V A + V NQL + G+ AA Sbjct: 183 DYKGSTSVLQTMINNNPTHPKVPDA--MIAVANNQL------------ESGQKAAARKTL 228 Query: 214 QLVLANYSDAEHAEEAMARL 233 + V+A Y E A+ A RL Sbjct: 229 EQVVAKYPGTEGAQAASNRL 248 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K S V++Y SPYV A++++ N L Y +R Y + Sbjct: 145 GDFKSAGSSFSAFVKKYPQSPYVPLAQYWLG---NSL----------YAQRD-YKGSTSV 190 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Q ++ N +AM + + AR+ + + +YP A+ +K Sbjct: 191 LQTMINNNPTHPKVPDAMIAVANNQLESGQKAAARKTLEQVVAKYPGTEGAQAASNRLK 249 >gi|171463095|ref|YP_001797208.1| tol-pal system protein YbgF [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192633|gb|ACB43594.1| tol-pal system protein YbgF [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 243 Score = 73.2 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 52/134 (38%), Gaps = 8/134 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S T +++ Y+ A+ + N KA + F + +P + +L +Y+ + Sbjct: 115 SGTVQPGEKKAYDDALKAFQAGNLKKADDSFAAFTAKYPKSPYLPLALYWGGNSKYANKE 174 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y A S + I +YP + +V + AQ+ + S I+ +Y Sbjct: 175 YAGAISQLQNLIKKYPNHPRIPAA--MVTLGNAQLESG------NKAAAKKIFSDIIAKY 226 Query: 170 TNSPYVKGARFYVT 183 ++ K A+ + Sbjct: 227 PDTEAAKDAQQLIA 240 Score = 54.0 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 14/118 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y SPY+ A ++ G ++ A KE Y AI + Sbjct: 136 GNLKKADDSFAAFTAKYPKSPYLPLALYW--GGNSKYANKE------------YAGAISQ 181 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 Q ++ Y + AM L A + A+++ S I +YP A+ + L+ Sbjct: 182 LQNLIKKYPNHPRIPAAMVTLGNAQLESGNKAAAKKIFSDIIAKYPDTEAAKDAQQLI 239 >gi|189500638|ref|YP_001960108.1| tol-pal system protein YbgF [Chlorobium phaeobacteroides BS1] gi|189496079|gb|ACE04627.1| tol-pal system protein YbgF [Chlorobium phaeobacteroides BS1] Length = 267 Score = 73.2 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 47/153 (30%), Gaps = 8/153 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 G S+ + S + +Y+ F + A + F +P + Sbjct: 123 TAADTAGVAPGSASAEAVPSSAPAIDDQGLYKAGKTFFDGYKYPSARKEFGLLLDTYPSS 182 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 A + A ++ +++A + I +YP+ Y+ G+S+ + Sbjct: 183 AFADDAQYYIAETYFNEKWFEKAILEYQLVIEKYPKGDKRPAAYFKQGLSFENI------ 236 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 T +V+ Y S + + Sbjct: 237 --GDTTNAKVRYRELVQLYPESNEARIVNSKMQ 267 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 40/114 (35%), Gaps = 14/114 (12%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + +++ Y +S + A+ I Y + AI +QLV+ Sbjct: 168 ARKEFGLLLDTYPSSAFADDAQ--------------YYIAETYFNEKWFEKAILEYQLVI 213 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Y + A + ++ + A+ + + YP+ AR V + ++ Sbjct: 214 EKYPKGDKRPAAYFKQGLSFENIGDTTNAKVRYRELVQLYPESNEARIVNSKMQ 267 >gi|302038648|ref|YP_003798970.1| putative tol-Pal system protein YbgF [Candidatus Nitrospira defluvii] gi|300606712|emb|CBK43045.1| putative Tol-Pal system protein YbgF (modular protein) [Candidatus Nitrospira defluvii] Length = 558 Score = 73.2 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 46/132 (34%), Gaps = 8/132 (6%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 RE YE+ + K+ + A + F + P + +A + Y + +A Sbjct: 433 ADRESYERTLTRFKDGDLDGARQGFAEFLLQHPHSDLAPNARFWLGESYYGKKDFSRAID 492 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 ++ +P S+ V G +Y + + K + ++++ Y SP Sbjct: 493 AYDQVQLNHPASEKVPAALLKKGYAYLAL--------KDRKKAASALKQVIDLYPKSPEA 544 Query: 176 KGARFYVTVGRN 187 A + + Sbjct: 545 NKAMDKLNQLKE 556 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 14/109 (12%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 Q + + ++ +S ARF++ G Y + ++ AI + V Sbjct: 453 ARQGFAEFLLQHPHSDLAPNARFWL--------------GESYYGKKDFSRAIDAYDQVQ 498 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 N+ +E A+ + AY+AL +A + + + YP+ A Sbjct: 499 LNHPASEKVPAALLKKGYAYLALKDRKKAASALKQVIDLYPKSPEANKA 547 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 42/129 (32%), Gaps = 22/129 (17%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + G A E++ Q+P S + +G SY +D + + Sbjct: 445 FKDGDLDGARQGFAEFLLQHPHSDLAPNARFWLGESYYGK-KDFSR-------AIDAYDQ 496 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + + S V A LA K+ R + A + V+ Y + Sbjct: 497 VQLNHPASEKVPAALLKKGYAY--LALKD---------RKK---AASALKQVIDLYPKSP 542 Query: 225 HAEEAMARL 233 A +AM +L Sbjct: 543 EANKAMDKL 551 >gi|313675083|ref|YP_004053079.1| outer membrane assembly lipoprotein yfio [Marivirga tractuosa DSM 4126] gi|312941781|gb|ADR20971.1| outer membrane assembly lipoprotein YfiO [Marivirga tractuosa DSM 4126] Length = 280 Score = 72.8 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 81/225 (36%), Gaps = 16/225 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A+ + ++ + KA Q + A + + Y +Y A+ + + Sbjct: 43 YDAAISYYEQGEYYKANVLLEQILPIIKGSEKAEIANFYYGYTYYYQEQYLLASHYFKTF 102 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + S+ + ++ S Q DQ ++K + + + + NS YV A Sbjct: 103 YDTFNRSEFAEEARFMFAFSLFQDSPRYNLDQTSSKEAIVALQGFINLFPNSEYVPKADA 162 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYV------AAIPRFQLVLANYSDAEHAEEAMARLV 234 ++ R++L K E Y +++ AA+ F ++ ++ EE + Sbjct: 163 ALSQLRSKLERKAYEKALLYYDLKKHMTGEFLKAALVEFDNFQDDFPGSQFTEEIRYLEI 222 Query: 235 EAYVALALMD----------EAREVVSLIQERYPQGYWARYVETL 269 EA LA + EA + E Y Q + E + Sbjct: 223 EAMYKLAQVSIYSVRKERYLEAMDFYEDFIETYEQSNYLPKAEKI 267 >gi|239906856|ref|YP_002953597.1| hypothetical protein DMR_22200 [Desulfovibrio magneticus RS-1] gi|239796722|dbj|BAH75711.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 312 Score = 72.8 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 51/128 (39%), Gaps = 8/128 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 VY K + + + +A F + +R+F + + ++ + + G + AA Sbjct: 191 SPADAVYAKGLTSFNSRQYQQALGIFQEFARNFKSSPLMANAMFWTGECYFQLGDFANAA 250 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 +E I +YP+S + G++++++ ++++Y +S + Sbjct: 251 LSYQEVIEKYPKSAKHADALFKRGVAFSKL--------GNAGAAKLSFKEVIDKYPDSAF 302 Query: 175 VKGARFYV 182 A+ + Sbjct: 303 AARAKTMM 310 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 47/140 (33%), Gaps = 22/140 (15%) Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 Y G++ R + L + +SP + A F+ Sbjct: 193 ADAVYAKGLTSFNS--------RQYQQALGIFQEFARNFKSSPLMANAMFWTGEC----- 239 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 Y + G++ A +Q V+ Y + +A+ + A+ L A+ Sbjct: 240 ---------YFQLGDFANAALSYQEVIEKYPKSAKHADALFKRGVAFSKLGNAGAAKLSF 290 Query: 251 SLIQERYPQGYWARYVETLV 270 + ++YP +A +T++ Sbjct: 291 KEVIDKYPDSAFAARAKTMM 310 >gi|298505600|gb|ADI84323.1| lytic transglycosylase domain protein [Geobacter sulfurreducens KN400] Length = 748 Score = 72.8 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 75/251 (29%), Gaps = 52/251 (20%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ +A + + +A E + +P + RK+ ++ A Q++ Y+QA + Sbjct: 96 LFWQAEALMAATRYDEAEEVLQRLVGTWPDSPTLRKARMLLADAQFARKDYRQALASYIR 155 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I YP + + + + +Q + I Y SP + A Sbjct: 156 FIELYPSGTDSVTANLKTALCREGLDD--------PRRAVQELRAIWLAYPASPVAETAE 207 Query: 180 FYVTV----------------------------------------GRNQLAAK----EVE 195 + + QLA ++ Sbjct: 208 QELKRLEALGFPAVPLTPDELLKRGTTLYNLGKYERALAVFNTIPLKEQLAGFNDRVALK 267 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 IG LK Y A F ++ E A+EA L A DEA + E Sbjct: 268 IGETLLKLRRYKDAARTFSSLIEREPKREIADEARFLLARAQNKAGNDDEAFLGFLKLAE 327 Query: 256 RYPQGYWARYV 266 P WA Sbjct: 328 TAPTSEWADNA 338 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 72/202 (35%), Gaps = 31/202 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 LK + + A F+ P +A ++ + A Q AG +A ++ Sbjct: 269 GETLLKLRRYKDAARTFSSLIEREPKREIADEARFLLARAQNKAGNDDEAFLG---FLKL 325 Query: 124 ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 P S+ D L ++ + + DQ L + +++ Y + A + Sbjct: 326 AETAPTSEWADNAL-LEA-AFVRKFQGRYADQ------LAVLEKLLTTYPGTKLKPRAMW 377 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 R G+Y +A F+L+ A+ A++ E A+ + + Sbjct: 378 ETAWAR--------------YNTGDYRSAAESFRLLTAS---ADYRERALYWHGRSLQRI 420 Query: 241 ALMDEAREVVSLIQERYPQGYW 262 AR+ +++ E YP ++ Sbjct: 421 GEETVARQSFAMLAEEYPFSFY 442 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 45/133 (33%), Gaps = 17/133 (12%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + T + E A + + ++ + +P + +++ +A+ +Y+ G Sbjct: 329 APTSEWADNALLEAAFVRKFQGRYADQLAVLEKLLTTYPGTKLKPRAMWETAWARYNTGD 388 Query: 110 YQQAASLGEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y S E + + + DY Y G R + T + Q + + Sbjct: 389 Y---RSAAESFRLL---TASADYRERALYWHG-------RSLQRIGEET-VARQSFAMLA 434 Query: 167 ERYTNSPYVKGAR 179 E Y S Y A Sbjct: 435 EEYPFSFYTFTAT 447 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 5/90 (5%) Query: 50 SVTDVRYQREVYEKAVLFL-----KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 S+ + +RE+ ++A L K N +A+ F + + P + A +LL +AFV+ Sbjct: 287 SLIEREPKREIADEARFLLARAQNKAGNDDEAFLGFLKLAETAPTSEWADNALLEAAFVR 346 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVY 134 G+Y ++ E+ +T YP +K Sbjct: 347 KFQGRYADQLAVLEKLLTTYPGTKLKPRAM 376 >gi|91216378|ref|ZP_01253345.1| putative TPR-repeat protein [Psychroflexus torquis ATCC 700755] gi|91185516|gb|EAS71892.1| putative TPR-repeat protein [Psychroflexus torquis ATCC 700755] Length = 1003 Score = 72.8 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 73/201 (36%), Gaps = 24/201 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A + K +N+ +F + + + Q++ G+Y A Sbjct: 502 YNIAYAYFKIKNYRSTISFFESFIAIERPSQRLHDAYVRLGDAQFALGQYWPAMEAYNSA 561 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I ++ N DY ++ SY + R+ ++ ++ V+ Y S Y A Sbjct: 562 IAM--KNYNSDYAFFQKAYSYGFVDRNAQK--------IENLNLFVQSYPKSIYKDDAL- 610 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 E+G Y+ E AAI +Q +L NY + + +A+++L Y Sbjct: 611 -------------FELGNTYVAENEDQAAITTYQNILTNYKQSIYYPKALSKLALIYFNK 657 Query: 241 ALMDEAREVVSLIQERYPQGY 261 EA + + + YP Sbjct: 658 GENQEALMRLKQLIKEYPNSQ 678 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 33/242 (13%), Positives = 85/242 (35%), Gaps = 48/242 (19%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + ++E ++ E A + ++ + K+L A + ++ G+ Sbjct: 601 PKSIYKDDALFELGNTYVAENEDQAAITTYQNILTNYKQSIYYPKALSKLALIYFNKGEN 660 Query: 111 QQAASLGEEYITQYPESKNV------------------DYVYYLVGMSY----------- 141 Q+A ++ I +YP S+ +Y ++ G+ + Sbjct: 661 QEALMRLKQLIKEYPNSQEALQAVQTARLIYIDLGQTDEYATWVRGLDFVEVADSDIEEA 720 Query: 142 -AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 + + D T ++ + +E + N + FY+ Sbjct: 721 TYEAAENKFLDNE-TDKAIEGFKKYLEEFPNGKNSLKSNFYLAQSL-------------- 765 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI--QERYP 258 + A++P ++ V+ + +E EE++ RL + Y++ D+A ++ + + + Sbjct: 766 FNSDQRQASVPYYEEVINS-RSSEFTEESLRRLAQIYLSEKNYDQAITSLNRLETEANFS 824 Query: 259 QG 260 Q Sbjct: 825 QN 826 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 67/229 (29%), Gaps = 31/229 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ--CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y V ++ A +YFN R P K+ A V Y+ G Y A + Sbjct: 426 YYYGVELFRDNQLKAAKDYFNSSLAERLDP--EFTAKATYWKAEVDYALGNYDMALIGYK 483 Query: 119 EYI---------TQYPESKNVDYVY-----YLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 E+ Y N+ Y Y Y +S+ + + + + Sbjct: 484 EFKGMPMAKQLSEFYSTDYNIAYAYFKIKNYRSTISFFESFIAIERPSQRLHDAYVRLGD 543 Query: 165 ----IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY---YLKRGEYVAAIPRFQLVL 217 + + + A +N + Y ++ R I L + Sbjct: 544 AQFALGQYWP----AMEAYNSAIAMKNYNSDYAFFQKAYSYGFVDRNAQK--IENLNLFV 597 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 +Y + + ++A+ L YVA A I Y Q + Sbjct: 598 QSYPKSIYKDDALFELGNTYVAENEDQAAITTYQNILTNYKQSIYYPKA 646 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 75/219 (34%), Gaps = 44/219 (20%) Query: 61 YEKAVLFLKEQNFSKAYEY-FNQCSRDFPFAGVARKSLLMSA--FVQYSAGKYQQAASLG 117 Y ++ + K NF KA + + P + +S L ++ Y A Sbjct: 209 YFQSDMNFKLGNFQKAIDLGMEKL----PKSNTRERSQLNKIIGESYFNLKDYTSAI--- 261 Query: 118 EEYITQYPESK----NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 +Y+ Y + N DY Y +G +Y Q +L + S Sbjct: 262 -QYLKDYKGDRGKWNNTDY--YQLGYAYYQT--------GQYELAIDEFS---------- 300 Query: 174 YVKGARFYVTVGRNQLAAKEV-EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA-MA 231 + G++ +A + + YLK + + A+ F+ V D + E+A + Sbjct: 301 -------KILDGQDFVAQNAYYHLAKAYLKTDKKIQALNAFKNVTEMNFDDKLKEDAYLN 353 Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 +Y EV+ E YP + ++ L+ Sbjct: 354 YAKLSYEIGNTYQSVPEVLQAFIENYPTSQESDLIKDLL 392 Score = 42.0 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 59/190 (31%), Gaps = 39/190 (20%) Query: 64 AVLFLKEQNFSKAYEYFNQCS-RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG----- 117 + ++++ A +Y + Y G+Y+ A Sbjct: 248 GESYFNLKDYTSAIQYLKDYKGDR---GKWNNTDYYQLGYAYYQTGQYELAIDEFSKILD 304 Query: 118 -EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 ++++ Q YY + +Y + + + L + E + + Sbjct: 305 GQDFVAQN--------AYYHLAKAYLKTDKKI--------QALNAFKNVTEMNFDDKLKE 348 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 A Y+ A EIG Y + Q + NY ++ ++ L+++ Sbjct: 349 DA--YLNY-----AKLSYEIG------NTYQSVPEVLQAFIENYPTSQESDLIKDLLIDS 395 Query: 237 YVALALMDEA 246 Y+ ++A Sbjct: 396 YLTSKNYEKA 405 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 27/214 (12%), Positives = 69/214 (32%), Gaps = 23/214 (10%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + ++S + + + A ++L E+N+ +A N+ + F+ + Sbjct: 779 EEVINSRSSEFTEESLRRLAQIYLSEKNYDQAITSLNRLETEANFSQNVVFAQSNLMKAY 838 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y + + E + +S + +V D + + + Sbjct: 839 YEIENFDRTVIYAE------------------LILSKDNIDEEVLSDAK-IFIARASLEV 879 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 E+ + Y + + + A + K Y A+ Q + NYS Sbjct: 880 GDEKRAETAYREVSTTATGKLK---AEALYYDAYFKNKSQNYEASTLVIQDLTKNYSRYR 936 Query: 225 HA-EEAMARLVEAYVALALMDEAREVVSLIQERY 257 + + + + + AL +A ++ I + + Sbjct: 937 EFGVKGLLLMAKNFNALGDDYQATYILENIIKNF 970 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 9/124 (7%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + Y+ + + + A + F++ F VA+ + A K Q Sbjct: 272 GKWNNTDYYQLGYAYYQTGQYELAIDEFSKILDGQDF--VAQNAYYHLAKAYLKTDKKIQ 329 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A + + + K + Y ++YA++ ++ ++ +LQ +E Y S Sbjct: 330 ALNAFKNVTEMNFDDKLKEDAY----LNYAKLSYEIGNTYQSVPEVLQAF---IENYPTS 382 Query: 173 PYVK 176 Sbjct: 383 QESD 386 >gi|261855155|ref|YP_003262438.1| tol-pal system protein YbgF [Halothiobacillus neapolitanus c2] gi|261835624|gb|ACX95391.1| tol-pal system protein YbgF [Halothiobacillus neapolitanus c2] Length = 321 Score = 72.8 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 43/134 (32%), Gaps = 8/134 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 Q+ +Y A LK+ + +A F P +L Y K Sbjct: 189 DAAATAKQQALYNAAFAQLKDGQYDQAITGFQAAIDADPQGQWTPSALFWQGETYYVEQK 248 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 ++ + ++ +TQ+P S V G + YD K +++ +Y Sbjct: 249 RDKSEAAYQKILTQFPNSDRVPDALLKTG--------YIAYDANKNKQARDIFQQVISKY 300 Query: 170 TNSPYVKGARFYVT 183 S A+ + Sbjct: 301 PQSQAANLAKQRLA 314 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 50/148 (33%), Gaps = 34/148 (22%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA-QMIRDVPYDQ 152 +++L +AF Q G+Y QA + + I P+ + + G +Y + RD Sbjct: 196 QQALYNAAFAQLKDGQYDQAITGFQAAIDADPQGQWTPSALFWQGETYYVEQKRD----- 250 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 +I+ ++ NS V A Y A + Sbjct: 251 ----KSEAAYQKILTQFPNSDRVPDALLKTGYI-------------------AYDANKNK 287 Query: 213 -----FQLVLANYSDAEHAEEAMARLVE 235 FQ V++ Y ++ A A RL Sbjct: 288 QARDIFQQVISKYPQSQAANLAKQRLAR 315 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 48/132 (36%), Gaps = 28/132 (21%) Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 Y + ++D YDQ + ++ + A F+ Sbjct: 198 ALY---NAAFAQLKDGQYDQ-----AITGFQAAIDADPQGQWTPSALFWQGET------- 242 Query: 193 EVEIGRYYL--KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREV 249 YY+ KR + AA +Q +L + +++ +A+ + AY A +AR++ Sbjct: 243 ------YYVEQKRDKSEAA---YQKILTQFPNSDRVPDALLKTGYIAYDA-NKNKQARDI 292 Query: 250 VSLIQERYPQGY 261 + +YPQ Sbjct: 293 FQQVISKYPQSQ 304 Score = 35.9 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 LK G+Y AI FQ + + A+ E Y D++ I ++P Sbjct: 207 LKDGQYDQAITGFQAAIDADPQGQWTPSALFWQGETYYVEQKRDKSEAAYQKILTQFPNS 266 Query: 261 YWARYVETLVK 271 R + L+K Sbjct: 267 D--RVPDALLK 275 >gi|317011700|gb|ADU85447.1| competence lipoprotein ComL [Helicobacter pylori SouthAfrica7] Length = 220 Score = 72.8 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 4/147 (2%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N A Y++ + + + +++L +Y A+ +EYI ++ NVD Sbjct: 52 NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 111 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Y+ +L S+ ++ DQ + + +E+Y NS Y + + L Sbjct: 112 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQ 169 Query: 192 KEVE--IGRYYLKRGEYVAAIPRFQLV 216 E+ I Y KR + + + Sbjct: 170 NELNRAIANVYKKRHKPEGVKRYLERI 196 >gi|294341057|emb|CAZ89452.1| putative Tol-Pal system, YbgF protein [Thiomonas sp. 3As] Length = 271 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 52/135 (38%), Gaps = 8/135 (5%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T ++ +E+A+ + +F+ + +P + + A QY+ +Y+ Sbjct: 145 TVQPAEKAAFEQALATFRNGDFAGSATQLKAFLAQYPSSPYDADAQYWLANAQYAQKQYK 204 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + + I P + + ++G++ Q+ + R + ++ +V+ Y Sbjct: 205 DAIASFQGLIQSSPNNPRLPEA--MLGLANCQI------EVRQIVAARKTLNELVKTYPQ 256 Query: 172 SPYVKGARFYVTVGR 186 S + R + R Sbjct: 257 SEAAQAGRDRLAKLR 271 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 50/143 (34%), Gaps = 22/143 (15%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A K+ A + G + +A+ + ++ QYP S Y + + Q Sbjct: 149 AEKAAFEQALATFRNGDFAGSATQLKAFLAQYPSSPYDADAQYWLANAQYA--------Q 200 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + K + +++ N+P + A + + ++ + VAA Sbjct: 201 KQYKDAIASFQGLIQSSPNNPRLPEAMLGLANCQ--------------IEVRQIVAARKT 246 Query: 213 FQLVLANYSDAEHAEEAMARLVE 235 ++ Y +E A+ RL + Sbjct: 247 LNELVKTYPQSEAAQAGRDRLAK 269 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 45/120 (37%), Gaps = 15/120 (12%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + + Q + + +Y +SPY A++++ + Sbjct: 154 FEQALATFRNGDFAGSATQ-LKAFLAQYPSSPYDADAQYWLANAQ--------------Y 198 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + +Y AI FQ ++ + + EAM L + + + AR+ ++ + + YPQ Sbjct: 199 AQKQYKDAIASFQGLIQSSPNNPRLPEAMLGLANCQIEVRQIVAARKTLNELVKTYPQSE 258 >gi|300310548|ref|YP_003774640.1| Tol-Pal cell envelope complex subunit YbgF protein [Herbaspirillum seropedicae SmR1] gi|300073333|gb|ADJ62732.1| Tol-Pal cell envelope complex subunit YbgF protein [Herbaspirillum seropedicae SmR1] Length = 251 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 50/131 (38%), Gaps = 8/131 (6%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 +++ Y+ A+ K ++ A F + +P +G A + Y+ Y+ A + Sbjct: 129 SEQQAYDAALSQFKGGDYKGAANAFADFLKRYPQSGYAPSAQYWQGNSLYAQRDYKGAIA 188 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + YP++ + S A++ + + +++ +Y N+P Sbjct: 189 AQQVVVKNYPDNPKAADALLNIASSQAELKDKA--------AAKKTLEQLIAKYPNTPAA 240 Query: 176 KGARFYVTVGR 186 + + + + Sbjct: 241 QTGKERMASLK 251 Score = 62.4 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 52/142 (36%), Gaps = 22/142 (15%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + + +A Q+ G Y+ AA+ +++ +YP+S Y G S Q Sbjct: 129 SEQQAYDAALSQFKGGDYKGAANAFADFLKRYPQSGYAPSAQYWQGNSLYA--------Q 180 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R K + +V+ Y ++P A + + +L K AA Sbjct: 181 RDYKGAIAAQQVVVKNYPDNPKAADALLNIASSQAELKDK--------------AAAKKT 226 Query: 213 FQLVLANYSDAEHAEEAMARLV 234 + ++A Y + A+ R+ Sbjct: 227 LEQLIAKYPNTPAAQTGKERMA 248 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + ++RY S Y A+++ N L Y +R Y AI Sbjct: 144 GDYKGAANAFADFLKRYPQSGYAPSAQYWQG---NSL----------YAQRD-YKGAIAA 189 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Q+V+ NY D A +A+ + + L A++ + + +YP Sbjct: 190 QQVVVKNYPDNPKAADALLNIASSQAELKDKAAAKKTLEQLIAKYPNTP 238 Score = 38.9 bits (90), Expect = 0.80, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 21/66 (31%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 K G+Y A F L Y + +A A + A A ++ + YP Sbjct: 141 FKGGDYKGAANAFADFLKRYPQSGYAPSAQYWQGNSLYAQRDYKGAIAAQQVVVKNYPDN 200 Query: 261 YWARYV 266 A Sbjct: 201 PKAADA 206 >gi|83718568|ref|YP_441917.1| hypothetical protein BTH_I1371 [Burkholderia thailandensis E264] gi|167580761|ref|ZP_02373635.1| hypothetical protein BthaT_21578 [Burkholderia thailandensis TXDOH] gi|167618864|ref|ZP_02387495.1| hypothetical protein BthaB_21312 [Burkholderia thailandensis Bt4] gi|257138088|ref|ZP_05586350.1| hypothetical protein BthaA_02539 [Burkholderia thailandensis E264] gi|83652393|gb|ABC36456.1| conserved hypothetical protein [Burkholderia thailandensis E264] Length = 249 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T + + + A + NF A F +P + + QY+ Sbjct: 121 EGTVQPGETDAFNAASQQFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYALRD 180 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ + + + + YP+ +G + Q+A + + ++V ++ Sbjct: 181 YKGSTATWQGLVKNYPQHPRAADALIAIG------TNQLEQGQKAA--AKKTLEQVVSQF 232 Query: 170 TNSPYVKGARFYVTVGR 186 S + A+ + + Sbjct: 233 PGSNAAETAQSKLDAIK 249 Score = 52.0 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 22/126 (17%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Q+ G ++ AA+ +I +YP+S Y +G + + R K Sbjct: 138 QFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYAL--------RDYKGSTATWQ 189 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 +V+ Y P A + IG L++G+ AA + V++ + + Sbjct: 190 GLVKNYPQHPRAADAL--------------IAIGTNQLEQGQKAAAKKTLEQVVSQFPGS 235 Query: 224 EHAEEA 229 AE A Sbjct: 236 NAAETA 241 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 37/109 (33%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y SPY A++++ A + +Y + Sbjct: 142 GNFKGAAASFRAFIAKYPQSPYQPTAQYWLGN-----AQYAL---------RDYKGSTAT 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q ++ NY A +A+ + + A++ + + ++P Sbjct: 188 WQGLVKNYPQHPRAADALIAIGTNQLEQGQKAAAKKTLEQVVSQFPGSN 236 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 22/59 (37%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + G + A F+ +A Y + + A L A AL + + + YPQ Sbjct: 139 FRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWLGNAQYALRDYKGSTATWQGLVKNYPQ 197 >gi|39996584|ref|NP_952535.1| soluble lytic murein transglycosylase, putative [Geobacter sulfurreducens PCA] gi|39983465|gb|AAR34858.1| soluble lytic murein transglycosylase, putative [Geobacter sulfurreducens PCA] Length = 747 Score = 72.1 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 76/251 (30%), Gaps = 52/251 (20%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ +A + + +A E + +P + RK+ ++ A Q++ +Y+QA + Sbjct: 96 LFWQAEALMAATRYDEAEEVLQRLVGTWPDSPTLRKARMLLADAQFARKEYRQALASYIR 155 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I YP + + + + +Q + I Y SP + A Sbjct: 156 FIELYPSGTDSVTANLKTALCREGLDD--------PRRAVQELRAIWLAYPASPVAETAE 207 Query: 180 FYVTV----------------------------------------GRNQLAAK----EVE 195 + + QLA ++ Sbjct: 208 QELKRLEALGFPAVPLTPDELLKRGTTLYNLGKYERALAVFNTIPLKEQLAGFNDRVALK 267 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 IG LK Y A F ++ E A+EA L A DEA + E Sbjct: 268 IGETLLKLRRYKDAARTFSSLIEREPKREIADEARFLLARAQNKAGNDDEAFLGFLKLAE 327 Query: 256 RYPQGYWARYV 266 P WA Sbjct: 328 TAPTSEWADNA 338 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 72/202 (35%), Gaps = 31/202 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 LK + + A F+ P +A ++ + A Q AG +A ++ Sbjct: 269 GETLLKLRRYKDAARTFSSLIEREPKREIADEARFLLARAQNKAGNDDEAFLG---FLKL 325 Query: 124 ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 P S+ D L ++ + + DQ L + +++ Y + A + Sbjct: 326 AETAPTSEWADNAL-LEA-AFVRKFQGRYADQ------LAVLEKLLTTYPGTKLKPRAMW 377 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 R G+Y +A F+L+ A+ A++ E A+ + + Sbjct: 378 ETAWAR--------------YNTGDYRSAAESFRLLTAS---ADYRERALYWHGRSLQRI 420 Query: 241 ALMDEAREVVSLIQERYPQGYW 262 AR+ +++ E YP ++ Sbjct: 421 GEETVARQSFAMLAEEYPFSFY 442 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 45/133 (33%), Gaps = 17/133 (12%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + T + E A + + ++ + +P + +++ +A+ +Y+ G Sbjct: 329 APTSEWADNALLEAAFVRKFQGRYADQLAVLEKLLTTYPGTKLKPRAMWETAWARYNTGD 388 Query: 110 YQQAASLGEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y S E + + + DY Y G R + T + Q + + Sbjct: 389 Y---RSAAESFRLL---TASADYRERALYWHG-------RSLQRIGEET-VARQSFAMLA 434 Query: 167 ERYTNSPYVKGAR 179 E Y S Y A Sbjct: 435 EEYPFSFYTFTAT 447 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 5/90 (5%) Query: 50 SVTDVRYQREVYEKAVLFL-----KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 S+ + +RE+ ++A L K N +A+ F + + P + A +LL +AFV+ Sbjct: 287 SLIEREPKREIADEARFLLARAQNKAGNDDEAFLGFLKLAETAPTSEWADNALLEAAFVR 346 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVY 134 G+Y ++ E+ +T YP +K Sbjct: 347 KFQGRYADQLAVLEKLLTTYPGTKLKPRAM 376 >gi|217032410|ref|ZP_03437904.1| hypothetical protein HPB128_164g10 [Helicobacter pylori B128] gi|216945889|gb|EEC24507.1| hypothetical protein HPB128_164g10 [Helicobacter pylori B128] Length = 207 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 4/147 (2%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N A Y++ + + + +++L +Y A+ +EYI ++ NVD Sbjct: 39 NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 98 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Y+ +L S+ ++ DQ + + +E+Y NS Y + + L Sbjct: 99 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQ 156 Query: 192 KEVE--IGRYYLKRGEYVAAIPRFQLV 216 E+ I Y KR + + + Sbjct: 157 NELNRAIANVYKKRHKPEGVKRYLERI 183 >gi|226942083|ref|YP_002797157.1| YbgF [Laribacter hongkongensis HLHK9] gi|226717010|gb|ACO76148.1| YbgF [Laribacter hongkongensis HLHK9] Length = 253 Score = 72.1 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 44/135 (32%), Gaps = 8/135 (5%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 V + Y++A+ L++++F KA P A A + + ++Q Sbjct: 127 PTVDPVQAGYDQALGLLRQRDFKKAIPALKSFIDANPQAAQAPDARYWLGVAYNAERQFQ 186 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + +I P V + + D + +++++ Sbjct: 187 PAIDTYQRFIELSPNHPRVPDA--------MRNLGGCQRDLGDSARAKSTWQALIKKFPK 238 Query: 172 SPYVKGARFYVTVGR 186 S + A+ + + Sbjct: 239 SEAAQKAKQQLASLK 253 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 40/116 (34%), Gaps = 14/116 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 QR K + + ++ + AR+++ V N A ++ AI Sbjct: 145 QRDFKKAIPALKSFIDANPQAAQAPDARYWLGVAYN--AE------------RQFQPAID 190 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 +Q + + +AM L L A+ + +++P+ A+ + Sbjct: 191 TYQRFIELSPNHPRVPDAMRNLGGCQRDLGDSARAKSTWQALIKKFPKSEAAQKAK 246 >gi|237752172|ref|ZP_04582652.1| TPR repeat-containing protein [Helicobacter winghamensis ATCC BAA-430] gi|229376414|gb|EEO26505.1| TPR repeat-containing protein [Helicobacter winghamensis ATCC BAA-430] Length = 222 Score = 72.1 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 72/189 (38%), Gaps = 5/189 (2%) Query: 19 LYKFALTIFFSIAVC-FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 +++ FS+ + F +++ + LD + + Y+ + ++ + KA Sbjct: 1 MFRIIKIAIFSLCLALFFSACSSKTNSGLALDEI--NKPADYWYQNMLKEIRNDDLEKAD 58 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 YF + + + +++L+ +Y A +E+ ++ + N+D++ +L Sbjct: 59 SYFVSLQSEHLNSPLLSEAMLILGRAHMQEEEYMLAGFYFDEFTKRFGNTDNIDFIRFLK 118 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG-RNQLAAKEVEI 196 + DQ+ ++ ++Y S Y + + L E EI Sbjct: 119 LQANYFAFSKQFRDQQLLLDSIKDAKEFTQKYPYSRYRPMVDSMLLRLELSNLTLNE-EI 177 Query: 197 GRYYLKRGE 205 R Y ++ + Sbjct: 178 ARLYERKKK 186 >gi|283850381|ref|ZP_06367670.1| tol-pal system protein YbgF [Desulfovibrio sp. FW1012B] gi|283574407|gb|EFC22378.1| tol-pal system protein YbgF [Desulfovibrio sp. FW1012B] Length = 317 Score = 71.7 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 50/125 (40%), Gaps = 8/125 (6%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 VY K + + + +A F + +R+F + + +L + + G + AA Sbjct: 199 DAVYAKGLASFNAKQYQQALGIFQEFARNFKTSPLMPNALFWTGECYFQLGDFANAALSY 258 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 +E + +YP+S + G+++ ++ ++++Y +S + Sbjct: 259 QEVVEKYPKSAKHADALFKRGVAFQKL--------GNAGAAKLSFKEVIDKYPDSAFAAR 310 Query: 178 ARFYV 182 A+ + Sbjct: 311 AKTMM 315 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 46/138 (33%), Gaps = 22/138 (15%) Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 Y G++ + + L + SP + A F+ Sbjct: 200 AVYAKGLASFNA--------KQYQQALGIFQEFARNFKTSPLMPNALFWTGEC------- 244 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 Y + G++ A +Q V+ Y + +A+ + A+ L A+ Sbjct: 245 -------YFQLGDFANAALSYQEVVEKYPKSAKHADALFKRGVAFQKLGNAGAAKLSFKE 297 Query: 253 IQERYPQGYWARYVETLV 270 + ++YP +A +T++ Sbjct: 298 VIDKYPDSAFAARAKTMM 315 >gi|224370137|ref|YP_002604301.1| putative aspartyl/asparaginyl beta-hydroxylase (Aspartate beta-hydroxylase) (Peptide-aspartate beta-dioxygenase) [Desulfobacterium autotrophicum HRM2] gi|223692854|gb|ACN16137.1| putative aspartyl/asparaginyl beta-hydroxylase (Aspartate beta-hydroxylase) (Peptide-aspartate beta-dioxygenase) [Desulfobacterium autotrophicum HRM2] Length = 286 Score = 71.7 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 51/141 (36%), Gaps = 8/141 (5%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V + + ++ +Y A L L + F +A + F + +P + A + A Y Sbjct: 154 VDGEKTVEDTSEKGLYSAAKLLLDKGEFEQARKAFEAFLKPYPESDNADNARFWIAESYY 213 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y++A ++ I YP+ V + G ++A + + + Sbjct: 214 REKWYEKAILEYQKVIENYPKGNKVSAALFKQGYAFANLGEKAN--------ARLILKEL 265 Query: 166 VERYTNSPYVKGARFYVTVGR 186 ++++ S A + + Sbjct: 266 IKKFPQSNEAGIAAEKLKSLQ 286 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 14/122 (11%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 D+ + + ++ Y S AR I Y + Y A Sbjct: 176 LDKGEFEQARKAFEAFLKPYPESDNADNAR--------------FWIAESYYREKWYEKA 221 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 I +Q V+ NY A+ + A+ L AR ++ + +++PQ A Sbjct: 222 ILEYQKVIENYPKGNKVSAALFKQGYAFANLGEKANARLILKELIKKFPQSNEAGIAAEK 281 Query: 270 VK 271 +K Sbjct: 282 LK 283 Score = 35.5 bits (81), Expect = 7.7, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 31/68 (45%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + L +GE+ A F+ L Y ++++A+ A + E+Y ++A + Sbjct: 169 YSAAKLLLDKGEFEQARKAFEAFLKPYPESDNADNARFWIAESYYREKWYEKAILEYQKV 228 Query: 254 QERYPQGY 261 E YP+G Sbjct: 229 IENYPKGN 236 >gi|296136888|ref|YP_003644130.1| tol-pal system protein YbgF [Thiomonas intermedia K12] gi|295797010|gb|ADG31800.1| tol-pal system protein YbgF [Thiomonas intermedia K12] Length = 271 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 52/135 (38%), Gaps = 8/135 (5%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T ++ +E+A+ + +F+ + +P + + A QY+ +Y+ Sbjct: 145 TVQPAEKAAFEQALATFRNGDFAGSATQLKAFLAQYPSSPYDADAQYWLANAQYAQKQYK 204 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + + I P + + ++G++ Q+ + R + ++ +V+ Y Sbjct: 205 DAITTFQGLIQSSPNNPRLPEA--MLGLANCQI------EVRQIVAARKTLNELVKTYPQ 256 Query: 172 SPYVKGARFYVTVGR 186 S + R + R Sbjct: 257 SEAAQAGRDRLAKLR 271 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 50/143 (34%), Gaps = 22/143 (15%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A K+ A + G + +A+ + ++ QYP S Y + + Q Sbjct: 149 AEKAAFEQALATFRNGDFAGSATQLKAFLAQYPSSPYDADAQYWLANAQYA--------Q 200 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + K + +++ N+P + A + + ++ + VAA Sbjct: 201 KQYKDAITTFQGLIQSSPNNPRLPEAMLGLANCQ--------------IEVRQIVAARKT 246 Query: 213 FQLVLANYSDAEHAEEAMARLVE 235 ++ Y +E A+ RL + Sbjct: 247 LNELVKTYPQSEAAQAGRDRLAK 269 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 45/120 (37%), Gaps = 15/120 (12%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + + Q + + +Y +SPY A++++ + Sbjct: 154 FEQALATFRNGDFAGSATQ-LKAFLAQYPSSPYDADAQYWLANAQ--------------Y 198 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + +Y AI FQ ++ + + EAM L + + + AR+ ++ + + YPQ Sbjct: 199 AQKQYKDAITTFQGLIQSSPNNPRLPEAMLGLANCQIEVRQIVAARKTLNELVKTYPQSE 258 >gi|284036952|ref|YP_003386882.1| hypothetical protein Slin_2038 [Spirosoma linguale DSM 74] gi|283816245|gb|ADB38083.1| TPR repeat-containing protein [Spirosoma linguale DSM 74] Length = 1024 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 74/216 (34%), Gaps = 33/216 (15%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA------RKSLLMSAFVQY 105 D + +Y + ++++++A YF G A + + + A + Sbjct: 524 ADSYATKSLYGLGYAYFNKKDYTRALPYFRDFVSR---GGDADDRVQVQDATIRLADTYF 580 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + +Y+ A ++ I Q + + DY Y + + + RD ++ Sbjct: 581 ATKQYENALRSYDQAIAQN--APDKDYASYQKALILSYVGRDA--------EAKAQFDQV 630 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 +Y NS +V + + ++G Y AI F ++ + ++ Sbjct: 631 QRQYPNSRFVDESL--------------FQKANVDFEKGSYQVAIQGFTKLIQDKPNSAL 676 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A+ + AY L D A I + Y + Sbjct: 677 IPAALLKRAIAYGNLQQYDPAVADYKRILDNYGESD 712 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 76/209 (36%), Gaps = 23/209 (11%) Query: 45 DVYLDSVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 D + R+ E +++KA + ++ ++ A + F + +D P + + +LL A Sbjct: 628 DQVQRQYPNSRFVDESLFQKANVDFEKGSYQVAIQGFTKLIQDKPNSALIPAALLKRAIA 687 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + +Y A + + + Y ES L+G I++ D + Q + Sbjct: 688 YGNLQQYDPAVADYKRILDNYGESDQAQSA--LLG------IQNTLNDAGRPEEFSQVLG 739 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 + + S V+ + E R G+Y AI F + Y + Sbjct: 740 QYKKGNPGSTDVERVQ--------------FENARNIYASGKYEQAIQSFLNFMQEYPAS 785 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSL 252 + +A + E+Y + A +L Sbjct: 786 PNTNQARYYVAESYRQTNDVANALRYYNL 814 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 86/242 (35%), Gaps = 36/242 (14%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 + + A L L + N + A + + +P + ++ + +++ Y A + Sbjct: 380 EEARFNHAKLQLDQNNGADAVKELTAFLKQYPDSKFENEANELVGEAYFASNNYPAAIAY 439 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT--NS-- 172 E + ++ Y ++Y Q I D + + + ++ Y NS Sbjct: 440 IEGLKR---RTPKIN-ATYQR-LTYNQGINDFN--AERYQQAVANFDKSLK-YPVENSLQ 491 Query: 173 ---------------PYVKGARFYVTVGR----NQLAAKEVEIGRY-YLKRGEYVAAIPR 212 Y Y ++ + + A K + Y Y + +Y A+P Sbjct: 492 QAAQFWKAESYSAGKQYDTAIPLYASISKAGGADSYATKSLYGLGYAYFNKKDYTRALPY 551 Query: 213 FQLVLANYSDAE---HAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVET 268 F+ ++ DA+ ++A RL + Y A + A R I + P +A Y + Sbjct: 552 FRDFVSRGGDADDRVQVQDATIRLADTYFATKQYENALRSYDQAIAQNAPDKDYASYQKA 611 Query: 269 LV 270 L+ Sbjct: 612 LI 613 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 41/126 (32%), Gaps = 14/126 (11%) Query: 45 DVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS--LLMSA 101 D ++ + + ++Y + Q+++KA ++ + R ++S A Sbjct: 116 DRFVKNNSQHPKAGQLYGDLGTYYYNRQDYTKAIDFLEKAVRQ--GGSSTQQSGYKYQLA 173 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 Y+ Q+A L E I P S + Y G + + + Sbjct: 174 LSYYNTQNLQKALPLLNE-IKVDPNSTDAPAASYYAGTINFRN--------KNFNEAVAD 224 Query: 162 MSRIVE 167 RI Sbjct: 225 FRRIEN 230 >gi|124266541|ref|YP_001020545.1| putative transmembrane protein [Methylibium petroleiphilum PM1] gi|124259316|gb|ABM94310.1| putative transmembrane protein [Methylibium petroleiphilum PM1] Length = 263 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 49/133 (36%), Gaps = 8/133 (6%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + +Y +AV L++ +F+ A F+ R +P +G + +L A QY Y+ A Sbjct: 139 EPEETRLYGEAVNVLRQGDFAGAVNAFSAFQRRYPSSGYSTAALYWLANAQYGKRDYKDA 198 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + P+ + ++ + TK + + +++ Y S Sbjct: 199 IPSFRALVAAAPDHPRAPEALLSIANCQLEL--------KDTKSARRTLDELLKNYPKSE 250 Query: 174 YVKGARFYVTVGR 186 + R + + Sbjct: 251 AAQAGRERLASLK 263 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 14/110 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q + S RY +S Y A +++ + Y KR Y AIP Sbjct: 155 QGDFAGAVNAFSAFQRRYPSSGYSTAALYWLANAQ-------------YGKRD-YKDAIP 200 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 F+ ++A D A EA+ + + L AR + + + YP+ Sbjct: 201 SFRALVAAAPDHPRAPEALLSIANCQLELKDTKSARRTLDELLKNYPKSE 250 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 37/129 (28%), Gaps = 22/129 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 G + A + + +YP S Y + + R K + + Sbjct: 154 RQGDFAGAVNAFSAFQRRYPSSGYSTAALYWLANAQYGK--------RDYKDAIPSFRAL 205 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V + P A + + L+ + +A +L NY +E Sbjct: 206 VAAAPDHPRAPEALLSIANCQ--------------LELKDTKSARRTLDELLKNYPKSEA 251 Query: 226 AEEAMARLV 234 A+ RL Sbjct: 252 AQAGRERLA 260 >gi|34558261|ref|NP_908076.1| TPR repeat-containing protein [Wolinella succinogenes DSM 1740] gi|34483980|emb|CAE10976.1| conserved hypothetical protein-TPR repeat containing protein [Wolinella succinogenes] Length = 217 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 76/202 (37%), Gaps = 17/202 (8%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G ++S + D Y++ + ++ + KA + F + + + ++ Sbjct: 19 GCSQKSDEAKEYNKPADYW-----YQRMLREIRASDLEKADDMFASLQSEHINSPLVPEA 73 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 +L+ +Y A EEY+ ++ S+N D++ YL + +Q+ Sbjct: 74 MLILGRAHMDDREYVLAEFYFEEYLKRFGTSENADFIGYLKLQANFFAFSRETLNQQLLL 133 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--EIGRYYLKRGEYVAAIP--- 211 + + +++Y S Y A + LA + EI R Y +G+ AA Sbjct: 134 DSIDEVEEYIKKYPYSRYKPYADTMLLKL--HLANLHLNKEIARIYTIQGKEEAAENYRE 191 Query: 212 RF-----QLVLANYSDAEHAEE 228 RF + +++ D + Sbjct: 192 RFKHHWLKEIVSKEPDMPWYRQ 213 >gi|187735116|ref|YP_001877228.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila ATCC BAA-835] gi|187425168|gb|ACD04447.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila ATCC BAA-835] Length = 316 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 87/262 (33%), Gaps = 49/262 (18%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE---VYEKAVLFLKEQNFSKAYEYFNQ 82 +F +A Q S + T ++ + ++A + + S A + + + Sbjct: 6 LFLMMAAVSGALALCQCSSEAPPPPGTVRMVDQQAIALMQEARAKEAKNDLSGAIKKYRR 65 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 P + A + A + + + +A ++ I ++P+S Y MS Sbjct: 66 VVEKHPLSREAPLARFRMAELYEARKEPAEAFDQYQKLIDRHPDSP-----LYRQAMSRQ 120 Query: 143 QMIR----------------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + + DV D L+++ N+PY A + V Sbjct: 121 KEMAFGAASGALTNRVLWMFDVRMDPTNVTEWLKHVRD------NAPYAPTAPQAMNVLG 174 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM--- 243 N LAA RG AI +Q ++ NY ++ A A ++ Y A Sbjct: 175 NYLAA-----------RGRMKEAIEAYQNLVDNYPNSPLAPTAQLQIATLYRQAAADGDR 223 Query: 244 -----DEAREVVSLIQERYPQG 260 A+E +RYP Sbjct: 224 NHVNVARAQEAYEDYLQRYPNS 245 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 5/142 (3%) Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSA--GKYQQAASLGEEYITQYPESKNVDYVYY 135 E+ + P+A A +++ + Y A G+ ++A + + YP S Sbjct: 151 EWLKHVRDNAPYAPTAPQAMNVLG--NYLAARGRMKEAIEAYQNLVDNYPNSPLAPTAQL 208 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + Y Q D + + ++RY NS AR + + +L A+++E Sbjct: 209 QIATLYRQAAADGDRNHVNVARAQEAYEDYLQRYPNSARAGAARADLAAMKRELVAQQLE 268 Query: 196 IGRYYL-KRGEYVAAIPRFQLV 216 + YYL K + AA+ +Q V Sbjct: 269 VAEYYLTKMKDADAAVFCYQEV 290 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 12/91 (13%) Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + A + R + A ++ AI +++ V+ + + A A R+ E Sbjct: 38 QQAIALMQEARAKEAKNDLS------------GAIKKYRRVVEKHPLSREAPLARFRMAE 85 Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYV 266 Y A EA + + +R+P R Sbjct: 86 LYEARKEPAEAFDQYQKLIDRHPDSPLYRQA 116 >gi|254490143|ref|ZP_05103334.1| tol-pal system protein YbgF, putative [Methylophaga thiooxidans DMS010] gi|224464629|gb|EEF80887.1| tol-pal system protein YbgF, putative [Methylophaga thiooxydans DMS010] Length = 271 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 50/131 (38%), Gaps = 8/131 (6%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y+ A+ L+ + +A +P + + +Y ++ AA+L Sbjct: 147 EAAYQSALQTLRSGQYQEAVTALQAFPEQYPDSIYLPNAYYWQGEAKYVLREFPDAAALF 206 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + I QYP S V G + +M T+ + +++++++Y +S K Sbjct: 207 QIVIDQYPASTKVADALLKRGFTEDEM--------GDTQRAIATLNQVIDQYPDSSAAKL 258 Query: 178 ARFYVTVGRNQ 188 A+ + Q Sbjct: 259 AKVRLDRINQQ 269 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 46/128 (35%), Gaps = 22/128 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +G+YQ+A + + + QYP+S + YY G + + + Sbjct: 158 RSGQYQEAVTALQAFPEQYPDSIYLPNAYYWQGEAKYVLREFPD--------AAALFQIV 209 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 +++Y S V A +++ G+ AI V+ Y D+ Sbjct: 210 IDQYPASTKVADALLKRGFTEDEM--------------GDTQRAIATLNQVIDQYPDSSA 255 Query: 226 AEEAMARL 233 A+ A RL Sbjct: 256 AKLAKVRL 263 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 42/112 (37%), Gaps = 14/112 (12%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + + + E+Y +S Y+ A ++ + Y+ R AA FQ+ Sbjct: 163 QEAVTALQAFPEQYPDSIYLPNAYYWQGEAK-------------YVLREFPDAAAL-FQI 208 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 V+ Y + +A+ + + A ++ + ++YP A+ + Sbjct: 209 VIDQYPASTKVADALLKRGFTEDEMGDTQRAIATLNQVIDQYPDSSAAKLAK 260 >gi|171915546|ref|ZP_02931016.1| hypothetical protein VspiD_30275 [Verrucomicrobium spinosum DSM 4136] Length = 986 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 20/180 (11%), Positives = 65/180 (36%), Gaps = 8/180 (4%) Query: 7 RAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66 R + ++ ++ + ++A V +++ ++ Y + + Sbjct: 360 RLMALYPEAKTEVEAAMFSNVVALADLLQVKTCQKACQEYLQAFPKGANAGTVAYIQGAV 419 Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 ++ +A F + P + +M +S G+ +A + + YI ++P+ Sbjct: 420 AMQAGELREAANLFGVLVENQPNGTFTEQMYMMQGSAYFSLGELAEALRVYKRYIAKFPK 479 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + + Y + +P + + + ++ + S YV+ A++ + + + Sbjct: 480 GASFEEAQYRAAI--------IPVFMGKFEEGWKLVEAFIKAHPRSQYVEDAKYRLMICK 531 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 10/72 (13%), Positives = 24/72 (33%), Gaps = 3/72 (4%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 R+ + ++ K+ + F D+P + + L A + Y+ Sbjct: 89 PRKRFAPVFFTLGAAAFNLPDYPKSIKAFETFLTDWPTHEKSFDARLALARACFRNKDYE 148 Query: 112 QAA---SLGEEY 120 +A + E + Sbjct: 149 KALGLFAELERF 160 >gi|285019181|ref|YP_003376892.1| hypothetical protein XALc_2421 [Xanthomonas albilineans GPE PC73] gi|283474399|emb|CBA16900.1| hypothetical protein XALc_2421 [Xanthomonas albilineans] Length = 256 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 8/126 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A LK ++ + F + +P A +L Y+ + A S + Sbjct: 133 YNLAFDALKAGKYADSANLFQSFLQKYPNGVYAPNALYWLGESYYATKNFDLAESQFRDL 192 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I +YP +G+S R + Q + +++ +Y S + A+ Sbjct: 193 IGRYPTHDKAAGAMLKLGLSQYGEGR--------VQEAEQTLQQVIGKYPGSDAARTAQD 244 Query: 181 YVTVGR 186 + R Sbjct: 245 RLQSIR 250 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 46/140 (32%), Gaps = 22/140 (15%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 ++ AF AGKY +A+L + ++ +YP Y +G SY + Sbjct: 129 ERTSYNLAFDALKAGKYADSANLFQSFLQKYPNGVYAPNALYWLGESYYAT--------K 180 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 L ++ RY GA + + + G A Sbjct: 181 NFDLAESQFRDLIGRYPTHDKAAGAMLKLGLSQ--------------YGEGRVQEAEQTL 226 Query: 214 QLVLANYSDAEHAEEAMARL 233 Q V+ Y ++ A A RL Sbjct: 227 QQVIGKYPGSDAARTAQDRL 246 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 41/115 (35%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 +++Y N Y A +++ G Y + A +F+ + Sbjct: 147 DSANLFQSFLQKYPNGVYAPNALYWL--------------GESYYATKNFDLAESQFRDL 192 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + Y + A AM +L + + EA + + + +YP AR + ++ Sbjct: 193 IGRYPTHDKAAGAMLKLGLSQYGEGRVQEAEQTLQQVIGKYPGSDAARTAQDRLQ 247 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 29/80 (36%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 V +Y + +NF A F +P A ++L QY G+ Sbjct: 160 PNGVYAPNALYWLGESYYATKNFDLAESQFRDLIGRYPTHDKAAGAMLKLGLSQYGEGRV 219 Query: 111 QQAASLGEEYITQYPESKNV 130 Q+A ++ I +YP S Sbjct: 220 QEAEQTLQQVIGKYPGSDAA 239 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 26/58 (44%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 LK G+Y + FQ L Y + +A A+ L E+Y A D A + RYP Sbjct: 140 LKAGKYADSANLFQSFLQKYPNGVYAPNALYWLGESYYATKNFDLAESQFRDLIGRYP 197 >gi|78224725|ref|YP_386472.1| TPR repeat-containing protein [Geobacter metallireducens GS-15] gi|78195980|gb|ABB33747.1| TPR repeat protein [Geobacter metallireducens GS-15] Length = 271 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 51/142 (35%), Gaps = 8/142 (5%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + +Y+K + + NF+ A E F + P +A + S Sbjct: 138 ETAQAKPPEPATPEALYQKGLDAYRSGNFAAARESFARFLEQHPKHELAVNAHYWSGEAY 197 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y KY+QA +E I +P + V L I DV K + + Sbjct: 198 YGEKKYEQAILEFQEVIKNFPGKEKVPAAM-LKQAGAFNEIGDV-------KSARYVLRK 249 Query: 165 IVERYTNSPYVKGARFYVTVGR 186 +++ + ++ + A+ + + Sbjct: 250 LIDEHPSTEEARRAKERLKALK 271 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 46/147 (31%), Gaps = 22/147 (14%) Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 P Y G+ + + +R +E++ A Sbjct: 144 PPEPATPEALYQKGLDAYRS--------GNFAAARESFARFLEQHPKHELAVNA------ 189 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 G Y +Y AI FQ V+ N+ E AM + A+ + + Sbjct: 190 --------HYWSGEAYYGEKKYEQAILEFQEVIKNFPGKEKVPAAMLKQAGAFNEIGDVK 241 Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271 AR V+ + + +P AR + +K Sbjct: 242 SARYVLRKLIDEHPSTEEARRAKERLK 268 >gi|312129683|ref|YP_003997023.1| tetratricopeptide tpr_1 repeat-containing protein [Leadbetterella byssophila DSM 17132] gi|311906229|gb|ADQ16670.1| Tetratricopeptide TPR_1 repeat-containing protein [Leadbetterella byssophila DSM 17132] Length = 996 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 91/251 (36%), Gaps = 33/251 (13%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQCSR 85 I CFL+ + VY D+ ++ +Y+K + ++A F+Q SR Sbjct: 547 LRIGDCFLMAKNFSQALQVYDDAFKGNTSGKDYALYQKGMALRYLGRENEAKNTFDQFSR 606 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 FP + + + L + + AG Y A + + + S+ +V G++Y+ + Sbjct: 607 TFPNSRLLDEVLFQNGNLAMEAGNYNGAINTFSNILKRQTNSELTAHVLLRRGIAYSNVE 666 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--VEIGRYYLKR 203 + + +I+ ++ S Y A + +Q E EI Y K Sbjct: 667 K--------YDNAISDFKQILNKFGKSKYASEAFLGIREALSQANRSEEFFEIAEVYKKN 718 Query: 204 ---------------------GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 +Y AAI F ++ Y + + EA + E+Y+ L Sbjct: 719 NPEGSSVQGLQFETAKDLFFAEKYDAAISAFTKFISQYPGSVYTPEANYLIGESYLGLKK 778 Query: 243 MDEAREVVSLI 253 EA + I Sbjct: 779 TTEALKYYQTI 789 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 62/213 (29%), Gaps = 34/213 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSR--DFPFAGVARK-----SLLMSAFVQYSAGKYQQA 113 Y + + +S A +F + + + L A + QA Sbjct: 506 YALGYMSFNNERYSDALRFFQDFKSGGR---GEASLQTSLDDANLRIGDCFLMAKNFSQA 562 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + ++ K DY Y GM+ + R+ + + NS Sbjct: 563 LQVYDDAFKGNTSGK--DYALYQKGMALRYLGRE--------NEAKNTFDQFSRTFPNSR 612 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 + + G ++ G Y AI F +L +++E + R Sbjct: 613 LLDEVL--------------FQNGNLAMEAGNYNGAINTFSNILKRQTNSELTAHVLLRR 658 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 AY + D A I ++ + +A Sbjct: 659 GIAYSNVEKYDNAISDFKQILNKFGKSKYASEA 691 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 90/286 (31%), Gaps = 60/286 (20%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS---RDFPFAGVARKSLL 98 S L+ +Y E + L + N S+ E+F ++ P + Sbjct: 673 SDFKQILNKFGKSKYASEAFLGIREALSQANRSE--EFFEIAEVYKKNNPEGSSVQGLQF 730 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG------------MSYAQMI- 145 +A + A KY A S ++I+QYP S YL+G + Y Q I Sbjct: 731 ETAKDLFFAEKYDAAISAFTKFISQYPGSVYTPEANYLIGESYLGLKKTTEALKYYQTIV 790 Query: 146 ---------------RDVPYDQRATKLMLQYMSRIV-------------ERYTNSPYVKG 177 + ++++ + + +++V E + S Y Sbjct: 791 NEGQLEYLSQAASRSAGIYFEKKQFEEAARNYNQVVNTTSDQREMIVAYEGWMKSQYELK 850 Query: 178 ARFYVTVGRNQL----------AAK--EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 ++ A E+ G+ Y+ + +A +F+ + D Sbjct: 851 KYDQTLELAEKILTTGPEVVVGAKNRAELYKGKAYMGMSNWASAKIQFEKTIELGKDVSA 910 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQG-YWARYVETLV 270 A EA RL E D + + + + Y W L+ Sbjct: 911 A-EAKYRLGEIQYKQKEYDASIKTMQELASNYSDFLEWYENAFLLI 955 Score = 37.8 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 67/219 (30%), Gaps = 41/219 (18%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFN----QCSRDFPFAGVARKSLLMSAFVQYSAG 108 D YQ+ Y + V F+ A +YF+ + S +A ++ L A Y Sbjct: 425 DEAYQKLAYSQGVQEYNSGRFANAIQYFDKSLVKVSSR----DLAVQAKLWKAESLYQQD 480 Query: 109 KYQQAASLGEEYITQYPESKNVD-----YVY-YLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + Q A +L E +T S + Y Y+ ++ L++ Sbjct: 481 QIQAAEALYRELLT---SSDKIARLKSQYALGYM------------SFNNERYSDALRFF 525 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 S A + L + IG +L + A+ + + Sbjct: 526 QDF-----KSGGRGEAS-----LQTSLDDANLRIGDCFLMAKNFSQALQVYDDAFKG--N 573 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + A+ + A L +EA+ +P Sbjct: 574 TSGKDYALYQKGMALRYLGRENEAKNTFDQFSRTFPNSR 612 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 55/171 (32%), Gaps = 36/171 (21%) Query: 89 FAGVARKSL-LMSAFVQYSAG-------KYQQAASLGEEYITQ-----YPESKNVDYVYY 135 F+ ++ +L S Y+ G Y A + YI+ P N+ Y Sbjct: 13 FSAYSQNTLSYSSIESHYNNGVELFGKKAYSSARKEFQNYISLSAKSLNPNKFNLANAEY 72 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 MS + R V + + P + + LA + Sbjct: 73 YSAMSSLY---------SKALDADIEVERFVLNHGDHP-----KAKIIYA--DLAQR--- 113 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 Y +RGEY AI ++ L+N +D E +L +Y L A Sbjct: 114 ----YYERGEYKDAIRYYEKALSNRADNLDTYEIRYQLGVSYYQLGDFQNA 160 >gi|30248244|ref|NP_840314.1| TPR repeat-containing protein [Nitrosomonas europaea ATCC 19718] gi|30180129|emb|CAD84131.1| TPR repeat [Nitrosomonas europaea ATCC 19718] Length = 275 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 45/126 (35%), Gaps = 8/126 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A +K ++S A F +P + +A + Y+ + +A + + Sbjct: 158 YDAAYASIKSGDYSGAVTGFESFLAQYPQSALAPSAAYWVGNAYYALRDFDKAITAQQRL 217 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I YP S V G+ + Q+A + + +++ Y + A+ Sbjct: 218 IEIYPGSPKVAD-----GLLNMASSQ-AEMGQKAA--ARKTLEKLIASYPGTEAATKAKQ 269 Query: 181 YVTVGR 186 + + Sbjct: 270 RLGTLK 275 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 55/141 (39%), Gaps = 22/141 (15%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A+++ +A+ +G Y A + E ++ QYP+S Y VG +Y + Sbjct: 153 AQRNRYDAAYASIKSGDYSGAVTGFESFLAQYPQSALAPSAAYWVGNAYYAL-------- 204 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R + R++E Y SP V + + ++ K AA Sbjct: 205 RDFDKAITAQQRLIEIYPGSPKVADGLLNMASSQAEMGQK--------------AAARKT 250 Query: 213 FQLVLANYSDAEHAEEAMARL 233 + ++A+Y E A +A RL Sbjct: 251 LEKLIASYPGTEAATKAKQRL 271 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 14/110 (12%), Positives = 34/110 (30%), Gaps = 14/110 (12%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + + +Y S A ++ +G Y ++ AI Q ++ Sbjct: 173 AVTGFESFLAQYPQSALAPSAAYW--------------VGNAYYALRDFDKAITAQQRLI 218 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 Y + + + + + + AR+ + + YP A + Sbjct: 219 EIYPGSPKVADGLLNMASSQAEMGQKAAARKTLEKLIASYPGTEAATKAK 268 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 +K G+Y A+ F+ LA Y + A A + AY AL D+A + E YP Sbjct: 165 IKSGDYSGAVTGFESFLAQYPQSALAPSAAYWVGNAYYALRDFDKAITAQQRLIEIYPGS 224 Query: 261 Y 261 Sbjct: 225 P 225 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 25/80 (31%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 Y + ++F KA + +P + LL A Q G+ Sbjct: 185 PQSALAPSAAYWVGNAYYALRDFDKAITAQQRLIEIYPGSPKVADGLLNMASSQAEMGQK 244 Query: 111 QQAASLGEEYITQYPESKNV 130 A E+ I YP ++ Sbjct: 245 AAARKTLEKLIASYPGTEAA 264 >gi|85858722|ref|YP_460924.1| tol system periplasmic component [Syntrophus aciditrophicus SB] gi|85721813|gb|ABC76756.1| tol system periplasmic component [Syntrophus aciditrophicus SB] Length = 280 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 50/163 (30%), Gaps = 9/163 (5%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L F +I ++ + + Y A F KE + KA F Sbjct: 127 LETFLAIGDKNGHAAASNGTKAKDNVKAKTTSREDQ-YAAAYSFFKEGKYEKARTEFENY 185 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + P + + Y KY++A E+ I YP+ + G+ + Sbjct: 186 LKANPKTSYSDNAQFWIGETYYFEKKYEKAILEYEKVIKNYPDGNRAANALFKQGLCFLM 245 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + ++++ Y N+ + AR + + Sbjct: 246 LEDKAS--------ARLIFQQVIKDYPNTSQARTARAKLLEIK 280 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 54/141 (38%), Gaps = 26/141 (18%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 +A+ + GKY++A + E Y+ P++ D + +G +Y ++ + Sbjct: 162 QYAAAYSFFKEGKYEKARTEFENYLKANPKTSYSDNAQFWIGETYYF--------EKKYE 213 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR--FQ 214 + ++++ Y + A F + L K A R FQ Sbjct: 214 KAILEYEKVIKNYPDGNRAANALFKQGLCFLMLEDK----------------ASARLIFQ 257 Query: 215 LVLANYSDAEHAEEAMARLVE 235 V+ +Y + A A A+L+E Sbjct: 258 QVIKDYPNTSQARTARAKLLE 278 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 14/109 (12%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + ++ + Y A+ IG Y +Y AI ++ Sbjct: 176 EKARTEFENYLKANPKTSYSDNAQ--------------FWIGETYYFEKKYEKAILEYEK 221 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 V+ NY D A A+ + ++ L AR + + + YP AR Sbjct: 222 VIKNYPDGNRAANALFKQGLCFLMLEDKASARLIFQQVIKDYPNTSQAR 270 >gi|95930002|ref|ZP_01312742.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684] gi|95133971|gb|EAT15630.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684] Length = 292 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 54/141 (38%), Gaps = 9/141 (6%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 + + +Y +A+ +++ +F+K+ + F Q + +P +A ++ Sbjct: 157 DEKPTAASATQDQPDALYHQALQLVQQGSDFTKSRDLFRQFIQSYPQHDLAVNAMYWIGE 216 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +Y+ A ++ I +YP + G+++ + + + Sbjct: 217 TLYGDKQYESAILQFQDVIQKYPNHPKMPAALMKQGLAFYAL--------GDVRNAKIIL 268 Query: 163 SRIVERYTNSPYVKGARFYVT 183 ++V+ Y +P A+ + Sbjct: 269 QKVVDNYPQTPEADKAQERLK 289 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 55/181 (30%), Gaps = 37/181 (20%) Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 VA L K A++ ++ Y + Q D Sbjct: 146 PVAPAVQLNQ-----RDEKPTAASATQDQ-----------PDALYHQALQLVQQGSDFT- 188 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 + ++ Y A ++ IG +Y +AI Sbjct: 189 ------KSRDLFRQFIQSYPQHDLAVNAMYW--------------IGETLYGDKQYESAI 228 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 +FQ V+ Y + A+ + A+ AL + A+ ++ + + YPQ A + + Sbjct: 229 LQFQDVIQKYPNHPKMPAALMKQGLAFYALGDVRNAKIILQKVVDNYPQTPEADKAQERL 288 Query: 271 K 271 K Sbjct: 289 K 289 >gi|301063194|ref|ZP_07203745.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] gi|300442689|gb|EFK06903.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] Length = 861 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 8/123 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K + E+++ A YF + +FP + ++ A Y ++ Sbjct: 742 YNKGIKAFGEEDYGVARGYFQKVMEEFPQTVIVDQAAYQYAMSYYREKDWKLTIFWLNWL 801 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + YPE++ VYY +G+ Y Q T+ + + V R+ + + A+ Sbjct: 802 LETYPETRRAAEVYYHMGLCYLN--------QGKTEQARVWFQKTVNRFPGTNWAGFAKD 853 Query: 181 YVT 183 + Sbjct: 854 RLQ 856 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 14/114 (12%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 Y +++E + + V A + + Y + ++ I +L Sbjct: 757 ARGYFQKVMEEFPQTVIVDQAAY----------QYAMS----YYREKDWKLTIFWLNWLL 802 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Y + A E + Y+ ++AR R+P WA + + ++ Sbjct: 803 ETYPETRRAAEVYYHMGLCYLNQGKTEQARVWFQKTVNRFPGTNWAGFAKDRLQ 856 >gi|220903667|ref|YP_002478979.1| tol-pal system protein YbgF [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867966|gb|ACL48301.1| tol-pal system protein YbgF [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 325 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 53/120 (44%), Gaps = 8/120 (6%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +++ V + + +A F +++ +A ++ A + ++ AA ++ Sbjct: 207 LFDAGVNAYNARKYDEAQRSFTDFLKNYKGHNLASEAQFYLAECYFQRNQFADAALSYDK 266 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I +YP+S + Y G+S++++ +Q A + ++++Y NSP A+ Sbjct: 267 VIKEYPKSSSAPGAYLKQGISFSKL------NQSAAAKAR--LEELIKKYPNSPEAARAK 318 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 40/115 (34%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + ++ Y A+FY+ Y +R ++ A + V Sbjct: 222 EAQRSFTDFLKNYKGHNLASEAQFYLAEC--------------YFQRNQFADAALSYDKV 267 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + Y + A A + ++ L A+ + + ++YP A +T +K Sbjct: 268 IKEYPKSSSAPGAYLKQGISFSKLNQSAAAKARLEELIKKYPNSPEAARAKTFLK 322 >gi|253827087|ref|ZP_04869972.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253510493|gb|EES89152.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 207 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 6/185 (3%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 +++ + LD V + Y+ + ++ + KA YF + + + ++ Sbjct: 5 ACSSKNNGGLALDEV--NKPADYWYQNMLKEIRNGDLEKADSYFTSLQSEHLHSPLLSEA 62 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 +L+ +Y A +EY ++ + +N+D++ +L + DQ+ + Sbjct: 63 MLILGRAHMQEEEYLLAIFYFDEYTKRFGDGQNIDFINFLKLQANYFAFAKQFRDQQLLE 122 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--EIGRYYLKRGEYVAAIPRFQ 214 ++ ++Y S Y + +LA + EI + Y K+ + AA Q Sbjct: 123 KSIKDAQDFGQKYPYSRYRPIVDTMLLKL--ELANLSLNKEIIKLYDKKDKPQAAEYYQQ 180 Query: 215 LVLAN 219 + N Sbjct: 181 KINEN 185 >gi|296123820|ref|YP_003631598.1| hypothetical protein Plim_3586 [Planctomyces limnophilus DSM 3776] gi|296016160|gb|ADG69399.1| Tetratricopeptide TPR_2 repeat protein [Planctomyces limnophilus DSM 3776] Length = 1077 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 83/240 (34%), Gaps = 25/240 (10%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K L + + + G++ + + L + V ++ + A E F Sbjct: 22 KARLACSSLLWLAMICGFQSFALQPT-LAQPPANSADLSDFNNGVGLYRQSRWGDAVESF 80 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 Q + P + +S + + Y +A ++ E++ +PE+ NV Y V Sbjct: 81 RQFIKANPQSPRVPESQIYIGLALINQQNYVEARTVLREFLKNFPENSNVAQARYRVAEC 140 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 ++ D P Q + +E+Y A Y+ + QL Sbjct: 141 SF-LLNDFP-------AAKQELQSYLEKYPQDALAPRALAYLGDVQLQL----------- 181 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ--ERYP 258 + AAI F+ + A++ L +AY A E ++++ I + +P Sbjct: 182 ---KDPQAAITTFEEARKRFPAGALADDIEYGLAQAYSAAGKTAEGQKLLDAIAARQNHP 238 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 52/163 (31%), Gaps = 22/163 (13%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y ++ A ++I P+S V +G++ V + Sbjct: 68 YRQSRWGDAVESFRQFIKANPQSPRVPESQIYIGLALINQQNYV--------EARTVLRE 119 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 ++ + + V AR+ V L ++ AA Q L Y Sbjct: 120 FLKNFPENSNVAQARYRVAECSFLL--------------NDFPAAKQELQSYLEKYPQDA 165 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 A A+A L + + L A ++R+P G A +E Sbjct: 166 LAPRALAYLGDVQLQLKDPQAAITTFEEARKRFPAGALADDIE 208 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 73/223 (32%), Gaps = 31/223 (13%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + ++Y + + +QN+ +A + ++FP ++ A + + A Sbjct: 94 PESQIY-IGLALINQQNYVEARTVLREFLKNFPENSNVAQARYRVAECSFLLNDFPAAKQ 152 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + Y+ +YP+ ++Y ++ D +A + +R+ Sbjct: 153 ELQSYLEKYPQDALAP-----RALAYLGDVQLQLKDPQA---AITTFEEARKRFPAGALA 204 Query: 176 KGARFYV-------------TVGRNQLAAKE---------VEIGRYYLKRGEYVAAIPRF 213 + + + +AA++ + +G +Y AI +F Sbjct: 205 DDIEYGLAQAYSAAGKTAEGQKLLDAIAARQNHPHAADALLLLGNQASTAKDYPVAIRQF 264 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +L+ Y + AE A+ A D A + + Sbjct: 265 ELLAERYPQSPLAETALTNRGYALFQTGQFDAAAAQFEKLAAQ 307 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 84/268 (31%), Gaps = 16/268 (5%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 AV G+ + +F + +AL + A + + D + + Sbjct: 540 AVAGKYLSMFPQATQRRRAYALQ-GLAYAKAQQWAKAEAVIKQFEAEFPGDPAVAAALMD 598 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A + + + A F + R + + + ++ G Y+ A EE+ Sbjct: 599 QAEVAEAAKQWPVALADFEKLKRLAAGTTNEPFAWRGTGWSRFRLGDYKLA---AEEFAQ 655 Query: 123 Q---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +P+ Y G S+ + T+ L+ + +R+ + Sbjct: 656 LSAKFPQHPLQAEAMYYEGESWLLA--------KETEKALKVFQQAFDRF-TPKDAASVK 706 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + + R + G A ++ +L + AE ++ + Sbjct: 707 EELKAPVLFGYRSGLMMARTLEQTGRLEQADQAYETLLKKFPKAEVFDQLLNEWALINYE 766 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVE 267 ++A ++ + + P+ A + Sbjct: 767 AGRFEQADKIFARLVAECPESPLADNAK 794 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 41/164 (25%), Gaps = 46/164 (28%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 +++ A F + +P + +A +L + + G++ AA+ ++ Sbjct: 248 GNQASTAKDYPVAIRQFELLAERYPQSPLAETALTNRGYALFQTGQFDAAAA---QFEKL 304 Query: 124 -----------YPESK--NVDYVYYLVGMSYAQ--------------------------- 143 P+ K Y Y G+S Sbjct: 305 AAQLEKTSSTWTPQQKQQAASY-LYWQGLSQKNGNQLEAALVTFAKSFDLAGGSSIAESV 363 Query: 144 --MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 T+ ++VE++ A V Sbjct: 364 LYQQTLTARQLGQTQKAEALALQLVEKWPQGDSADDALLMVIDL 407 Score = 42.0 bits (98), Expect = 0.087, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 46/130 (35%), Gaps = 16/130 (12%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFA---GVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + ++ F +A F ++D P + +A K+ + A + ++QA ++ Sbjct: 958 GRAYKQQAKFDEARAAFQIVTKD-PQSQQTELAAKAQFLLAETYFLQENWKQAFLEYQKV 1016 Query: 121 ITQY--PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + Y PE + G+ + K + R++ + N Y A Sbjct: 1017 YSNYAFPEWQAA-------GL---LQAAKCDEQRSQWKEAIATYERLLREFPNVSYATEA 1066 Query: 179 RFYVTVGRNQ 188 + + R + Sbjct: 1067 KERLEAARKR 1076 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 30/76 (39%), Gaps = 1/76 (1%) Query: 45 DVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + L ++ + A++ + F +A + F + + P + +A + L A Sbjct: 741 ETLLKKFPKAEVFDQLLNEWALINYEAGRFEQADKIFARLVAECPESPLADNAKLSLAES 800 Query: 104 QYSAGKYQQAASLGEE 119 G++ +A EE Sbjct: 801 DLIQGEFARARKSLEE 816 >gi|207091899|ref|ZP_03239686.1| hypothetical protein HpylHP_02181 [Helicobacter pylori HPKX_438_AG0C1] Length = 198 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 4/147 (2%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N A Y++ + + + +++L +Y A+ +EYI ++ NVD Sbjct: 30 NLETADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVD 89 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Y+ +L S+ ++ DQ + + +E+Y NS Y + + L Sbjct: 90 YLTFLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQ 147 Query: 192 KEVE--IGRYYLKRGEYVAAIPRFQLV 216 E+ I Y KR + + + Sbjct: 148 NELNRAIANVYKKRHKPEGVKRYLERI 174 >gi|326799635|ref|YP_004317454.1| Tetratricopeptide TPR_1 repeat-containing protein [Sphingobacterium sp. 21] gi|326550399|gb|ADZ78784.1| Tetratricopeptide TPR_1 repeat-containing protein [Sphingobacterium sp. 21] Length = 1048 Score = 70.1 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 62/210 (29%), Gaps = 31/210 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +++ ++ + + +P + A + + + G+ + A ++ Sbjct: 591 LFQSGIIRGLQGDADGKISIMTDLLARYPNSNYADDANFEIPYTFFLKGENEIAIQGLQD 650 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I +YP S V +G+ + ++ R+VE+Y + K A Sbjct: 651 MIEKYPRSSYVPRALVTIGLVQYNSDNN--------DAAVRTFQRVVEQYPTTEEAKQAL 702 Query: 180 FYVTVGR------------------NQLAAKE-----VEIGRYYLKRGEYVAAIPRFQLV 216 + L+ E ++ Y RG+Y AAI Sbjct: 703 KSIQNIYIDKGDAQGFLDYAGTTAIGDLSTAEQDNITFQVANNYFSRGDYQAAIEAVNAY 762 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEA 246 + + A E+ EA Sbjct: 763 FDKFPKPIQEKFARFIRAESLYKTGHPQEA 792 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 55/171 (32%), Gaps = 24/171 (14%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 ++ + Y A + ++ ++K DY + G+ IR + Q Sbjct: 555 AIARLGDSYFMLKDYGNAMEQYNKLMST--KAKTQDYALFQSGI-----IRGL---QGDA 604 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + M+ ++ RY NS Y A F + E+ AI Q Sbjct: 605 DGKISIMTDLLARYPNSNYADDANFEIPYTFFLKGENEI--------------AIQGLQD 650 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 ++ Y + + A+ + D A + E+YP A+ Sbjct: 651 MIEKYPRSSYVPRALVTIGLVQYNSDNNDAAVRTFQRVVEQYPTTEEAKQA 701 Score = 42.4 bits (99), Expect = 0.076, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 72/214 (33%), Gaps = 23/214 (10%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 ++ L+ T +R + + L+L ++ +++A + + ++ Sbjct: 797 NIILNDWTSAYTERTLLSVSNLYLDQKKYNEAIAPLKKLELTAEYKSHYNFAINNLMVAY 856 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++ + + Y+ +Y +S D YA + D + Sbjct: 857 FNIHDFDNTL-MYARYVKEYEKSSVEDKA---KADLYAAKAHMLKGDLSTARK------E 906 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + + NS + GA IG+ + GEY AA ++ N + Sbjct: 907 LNQAVANSQTIVGAEAK------------YNIGKLQYEAGEYKAAQETAFDLIKNMPSYD 954 Query: 225 H-AEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + ++ L + Y L +A+ + I E Y Sbjct: 955 YWVAKSFILLADCYTKLKDEFQAKSTLQSIIENY 988 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 23/71 (32%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D T + ++ + ++N+ KA E+F + + + + Sbjct: 105 DHPTSANTKAAYFQVGRSYFAKKNYPKAIEWFKKLDGGNLSGSENTEYRFKLGYSLFMTE 164 Query: 109 KYQQAASLGEE 119 Y A L E Sbjct: 165 DYNAAKPLFER 175 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 51/168 (30%), Gaps = 45/168 (26%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFA------------------- 90 + ++ Y+ + K N+ KA + + F Sbjct: 288 KTQNNQDDYQIGYIAYKNGNYEKAIKELEKLTEPDAYFQSGMIILGDSFLKLGNKESARN 347 Query: 91 ------------GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + + LL A + Y +Q A +EY+ YP SKN+D Sbjct: 348 AFFRASKLDFDPSMKEQGLLNYAKLSYELEFHQVALDATQEYLKTYPRSKNLDEA----- 402 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 ++ +V + + + + I +R + A VT R Sbjct: 403 ---KTLLAEVLLSTKNYRSAVDILESIPKR---TKEANAAYQKVTYFR 444 Score = 35.5 bits (81), Expect = 7.7, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 12/100 (12%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + + Y+ + + ++ AY + + ++ + ++ QA Sbjct: 26 WQSLNQAYKTGMELYERGKYASAYNQLGKVETIRTNTTI-QQDESDQISLLKENARFYQA 84 Query: 114 ASLGE-----------EYITQYPESKNVDYVYYLVGMSYA 142 E ++I +P S N Y+ VG SY Sbjct: 85 VCALELGNHDAEGLFLKFIKDHPTSANTKAAYFQVGRSYF 124 Score = 35.1 bits (80), Expect = 9.8, Method: Composition-based stats. Identities = 32/249 (12%), Positives = 67/249 (26%), Gaps = 60/249 (24%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL------ 97 +D+ R + ++ N A F + +P A+++L Sbjct: 649 QDMIEKYPRSSYVPRALVTIGLVQYNSDNNDAAVRTFQRVVEQYPTTEEAKQALKSIQNI 708 Query: 98 -LMSAFV------------------------------QYSAGKYQQAASLGEEYITQYPE 126 + +S G YQ A Y ++P+ Sbjct: 709 YIDKGDAQGFLDYAGTTAIGDLSTAEQDNITFQVANNYFSRGDYQAAIEAVNAYFDKFPK 768 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + ++ S + + L + I+ + S Y + Sbjct: 769 PIQEKFARFIRAESLYKT--------GHPQEALHDFNIILNDW-TSAYTERTL------- 812 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 + + YL + +Y AI + + H A+ L+ AY + D Sbjct: 813 -------LSVSNLYLDQKKYNEAIAPLKKLELTAEYKSHYNFAINNLMVAYFNIHDFDNT 865 Query: 247 REVVSLIQE 255 ++E Sbjct: 866 LMYARYVKE 874 >gi|322435204|ref|YP_004217416.1| Tetratricopeptide repeat [Acidobacterium sp. MP5ACTX9] gi|321162931|gb|ADW68636.1| Tetratricopeptide repeat [Acidobacterium sp. MP5ACTX9] Length = 315 Score = 70.1 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 55/146 (37%), Gaps = 8/146 (5%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 R + D +E+Y+ A + A F + +P +A + Sbjct: 170 RGGKPSAAIPQAADGPTAQELYKSAYGDYMAAKYPVASSEFGDIIKAYPNDTLAGNAYYY 229 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + Y AGKY AA + + Q+P++ + Y G + ++ + T + Sbjct: 230 LGEIDYRAGKYATAARSYDRVLEQFPDNNKIPAAYLHKGQALIEL--------KQTDAGV 281 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVG 185 + + +++R+ +SP AR + Sbjct: 282 RELRALIQRFPSSPEATQARAKLNAL 307 Score = 42.8 bits (100), Expect = 0.058, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 31/104 (29%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 I++ Y N A +Y+ + G+Y A + VL Sbjct: 206 ASSEFGDIIKAYPNDTLAGNAYYYLGEID--------------YRAGKYATAARSYDRVL 251 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + D A +A + L D + + +R+P Sbjct: 252 EQFPDNNKIPAAYLHKGQALIELKQTDAGVRELRALIQRFPSSP 295 >gi|256370729|ref|YP_003108554.1| hypothetical protein SMDSEM_178 [Candidatus Sulcia muelleri SMDSEM] gi|256009521|gb|ACU52881.1| hypothetical protein SMDSEM_178 [Candidatus Sulcia muelleri SMDSEM] Length = 643 Score = 70.1 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 42/85 (49%) Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 +GM Y + D +DQ+ ++ + ++ Y NS + A+ + L K++ I Sbjct: 468 LGMCYYKQANDYNFDQQNNLKSIKVFLKFIKSYPNSLKLNTAKKMLYKAVLNLKKKQISI 527 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYS 221 G +Y KR +Y A++ F+ + N+ Sbjct: 528 GNFYFKRKKYKASLFIFKDNIENFK 552 >gi|152981712|ref|YP_001354159.1| Tol-Pal cell envelope complex subunit YbgF [Janthinobacterium sp. Marseille] gi|151281789|gb|ABR90199.1| YbgF subunit of Tol-Pal Cell Envelope Complex [Janthinobacterium sp. Marseille] Length = 243 Score = 70.1 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 53/129 (41%), Gaps = 8/129 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + ++ Y+ A+ K ++ K+ F + +P + A + Y+ Y+ A Sbjct: 120 QSEQSAYDSALALFKAGDYKKSGTAFGDFVQRYPESAYAPSAQYWIGNAYYAQRDYKNAI 179 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + + + +YP++ + S ++ D+ A K L+ +V +Y N+P Sbjct: 180 TAQQALLKKYPDNPKAADALLNIASSQTEL-----KDRAAAKKTLES---LVAKYPNAPA 231 Query: 175 VKGARFYVT 183 + A+ + Sbjct: 232 AQTAKERLA 240 Score = 65.5 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 22/142 (15%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + +S SA + AG Y+++ + +++ +YPES Y +G +Y Q Sbjct: 121 SEQSAYDSALALFKAGDYKKSGTAFGDFVQRYPESAYAPSAQYWIGNAYYA--------Q 172 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R K + ++++Y ++P A + + +L + AA Sbjct: 173 RDYKNAITAQQALLKKYPDNPKAADALLNIASSQTEL--------------KDRAAAKKT 218 Query: 213 FQLVLANYSDAEHAEEAMARLV 234 + ++A Y +A A+ A RL Sbjct: 219 LESLVAKYPNAPAAQTAKERLA 240 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY S Y A+++ IG Y + +Y AI Sbjct: 136 GDYKKSGTAFGDFVQRYPESAYAPSAQYW--------------IGNAYYAQRDYKNAITA 181 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Q +L Y D A +A+ + + L A++ + + +YP Sbjct: 182 QQALLKKYPDNPKAADALLNIASSQTELKDRAAAKKTLESLVAKYPN 228 Score = 39.3 bits (91), Expect = 0.56, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 24/86 (27%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 D Y + ++++ A + +P A +LL A Q Sbjct: 147 DFVQRYPESAYAPSAQYWIGNAYYAQRDYKNAITAQQALLKKYPDNPKAADALLNIASSQ 206 Query: 105 YSAGKYQQAASLGEEYITQYPESKNV 130 A E + +YP + Sbjct: 207 TELKDRAAAKKTLESLVAKYPNAPAA 232 >gi|149176357|ref|ZP_01854971.1| hypothetical protein PM8797T_07539 [Planctomyces maris DSM 8797] gi|148844709|gb|EDL59058.1| hypothetical protein PM8797T_07539 [Planctomyces maris DSM 8797] Length = 1027 Score = 70.1 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 77/217 (35%), Gaps = 22/217 (10%) Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 + + + ++ A+ K+ + A E F + +D+P + Sbjct: 20 CLILLLLSLLPLPLVHADKASDEFQLAIGLYKQNRWELATERFQKYLKDYPTDASVPLAK 79 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + KYQ+A ++ E++ Q+P++ N+ Y + ++ D+ Sbjct: 80 FYLGLTLVNQQKYQEARTILREFVKQHPQNNNLPDALYRIAECSY-LLDDLD-------A 131 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + + ++ Y N + A Y G L+RG+ AI FQ L Sbjct: 132 AEKEFTEFLKLYPNHALEEWAYPYF--------------GDVLLRRGKADLAIKSFQRSL 177 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 + AE+A L +Y+ DEA + I Sbjct: 178 ERHPKGAMAEDAQFGLASSYLRNKQSDEAEKRFKAIA 214 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 69/225 (30%), Gaps = 30/225 (13%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + D TD + + + +Q + +A + + P +L A Sbjct: 63 QKYLKDYPTDASVPLAKFYLGLTLVNQQKYQEARTILREFVKQHPQNNNLPDALYRIAEC 122 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y A E++ YP ++ Y DV + L ++ Sbjct: 123 SYLLDDLDAAEKEFTEFLKLYPNHALEEWAY--------PYFGDVLLRRGKADLAIKSFQ 174 Query: 164 RIVERYTNSPYVKGARFYVT--VGRNQL---AAK-----------------EVEIGRYYL 201 R +ER+ + A+F + RN+ A K ++ + Sbjct: 175 RSLERHPKGAMAEDAQFGLASSYLRNKQSDEAEKRFKAIAGQKNHSRGSDAQMSLATSLF 234 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 RG+Y +A F + + ++ A AY L +A Sbjct: 235 DRGQYQSAADAFLELPEKFPESPLGITARLNAGYAYYDLKQYAKA 279 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 73/197 (37%), Gaps = 25/197 (12%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A + A + F + FP + + + L + + Y +Y +A + +T+ Sbjct: 230 ATSLFDRGQYQSAADAFLELPEKFPESPLGITARLNAGYAYYDLKQYAKAIQQFD-LVTK 288 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 P+ Y G+S ++ + ++ SP K + Y Sbjct: 289 DPKH--AANALYWKGVSL--------KGEQQLPAAITAFELALKSKP-SPQQKESTTY-- 335 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 + L L+ G+ AA F V+ + +E A++++ +EA + + Sbjct: 336 QLADAL-----------LRSGKPAAAKALFLEVVKQFPKSELADDSLHFAIEAALLTDEL 384 Query: 244 DEAREVVSLIQERYPQG 260 EA ++ + ++ +PQ Sbjct: 385 AEAEQLSAQFEKTFPQS 401 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 29/218 (13%), Positives = 74/218 (33%), Gaps = 23/218 (10%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 Y + + A + + + + F + A S L +A + K Sbjct: 627 PESPLTAEAAYMQGRSLENNKQLDAAVDVYQKVLQQFAPSRYAMLSGLQAARTLFQLKKI 686 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + E + ++P+ N+D + + + + D + R++ Sbjct: 687 DEVNLAYEALLQKFPKVDNLDKILDEWALINYEAEQFAKSD--------EIFRRLITETP 738 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-A 229 +S AR LA ++ G+ A F + ++ + ++ + Sbjct: 739 DSELADNARL-------SLAESDLIAGKL-------EPAAKAFTELQSDPKSDKKVQQVS 784 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 + RL+E + L + + + +R+P+ +A + + Sbjct: 785 LYRLIEINLELQKWELVDKFSKELLKRFPENEYAAFAQ 822 Score = 39.7 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 14/119 (11%), Positives = 37/119 (31%), Gaps = 5/119 (4%) Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL-----KRGEYVA 208 + Y + + + ++ V + ++YL + +Y Sbjct: 35 HADKASDEFQLAIGLYKQNRWELATERFQKYLKDYPTDASVPLAKFYLGLTLVNQQKYQE 94 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 A + + + + +A+ R+ E L +D A + + + YP + Sbjct: 95 ARTILREFVKQHPQNNNLPDALYRIAECSYLLDDLDAAEKEFTEFLKLYPNHALEEWAY 153 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 67/222 (30%), Gaps = 40/222 (18%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + + + Y+ A L+ + A F + + FP + +A SL + + Sbjct: 324 KPSPQQKESTTYQLADALLRSGKPAAAKALFLEVVKQFPKSELADDSLHFAIEAALLTDE 383 Query: 110 YQQAASLGEEYITQYPE-----SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 +A L ++ +P+ + + L G I D + Sbjct: 384 LAEAEQLSAQFEKTFPQSGLRLHQEL-----LKG-----RILDAKGKPEDLATAATHFQN 433 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY---- 220 ++ S LA + + R Y K +Y +I VL Y Sbjct: 434 VLN---ESK---------LENTQLLAR--LYLARTYQKLKQYDKSI----EVLDPYLKDP 475 Query: 221 ---SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + +A+ + + EA + +++P Sbjct: 476 KAVKTSSEYADALVLQSNNFNSQQKYAEAESLSKEYLKQFPN 517 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 41/122 (33%), Gaps = 14/122 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + + + Y+Q+ + + IV+ + SP + QLA Sbjct: 562 YRQLAERNYEQKQWARAKTFFNEIVKLGSESPEFPAGLSGLAWSEFQLAEN--------- 612 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 AA FQ + + ++ EA + +D A +V + +++ Sbjct: 613 -----AAAAEHFQQFVQKFPESPLTAEAAYMQGRSLENNKQLDAAVDVYQKVLQQFAPSR 667 Query: 262 WA 263 +A Sbjct: 668 YA 669 >gi|154174122|ref|YP_001407991.1| hypothetical protein CCV52592_1590 [Campylobacter curvus 525.92] gi|112803354|gb|EAU00698.1| conserved hypothetical protein [Campylobacter curvus 525.92] Length = 215 Score = 70.1 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 74/195 (37%), Gaps = 11/195 (5%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 ++ KF T+ F + + G + + L E Y + + +K+ + Sbjct: 1 MRKISKFIATLGFVV---LIGGCAEKYTELYNL-------TPDEWYAQIITDIKDSDLEA 50 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY-PESKNVDYVY 134 A +++ + + + + + LL+ A + +Y A +EYI +Y ++ Sbjct: 51 ADKHYTSMASEHVASPLLEQILLILAQAHVNEEEYLLANHYLDEYIKRYGDGGPKTEFAQ 110 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 YL + +Q+ + ++ + + + Y N+ + + + L + Sbjct: 111 YLKIKANFDSFSQPNRNQKLMEDSVKEIEKFLYMYPNTEFRPLIETMLIKFKLSLYYLNI 170 Query: 195 EIGRYYLKRGEYVAA 209 +I Y + G V+A Sbjct: 171 QIEDLYKRTGRDVSA 185 >gi|258591278|emb|CBE67575.1| exported protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 419 Score = 70.1 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 46/133 (34%), Gaps = 8/133 (6%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 E+Y A+ + ++ A F +P + + + YS +Y QA Sbjct: 295 TESAGELYRNALNDYAKGDYELAISGFRSQIELYPNSSLLPNARYWLGESYYSQKQYDQA 354 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + + Q+PE G ++ +M + R+++++ S Sbjct: 355 VTEFAVLVKQHPEHPKAASALLKQGFAHLEMGDKP--------KGRTVLDRLLKQFPKSQ 406 Query: 174 YVKGARFYVTVGR 186 + A+ ++ + Sbjct: 407 ESRWAKERLSQIK 419 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 52/135 (38%), Gaps = 22/135 (16%) Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Y ++ +L + +E Y NS + AR+++ Sbjct: 301 LYRNALNDYAK--------GDYELAISGFRSQIELYPNSSLLPNARYWL----------- 341 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 G Y + +Y A+ F +++ + + A A+ + A++ + + R V+ + Sbjct: 342 ---GESYYSQKQYDQAVTEFAVLVKQHPEHPKAASALLKQGFAHLEMGDKPKGRTVLDRL 398 Query: 254 QERYPQGYWARYVET 268 +++P+ +R+ + Sbjct: 399 LKQFPKSQESRWAKE 413 >gi|78187936|ref|YP_375979.1| putative lipoprotein [Chlorobium luteolum DSM 273] gi|78167838|gb|ABB24936.1| putative lipoprotein [Chlorobium luteolum DSM 273] Length = 306 Score = 70.1 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 84/240 (35%), Gaps = 43/240 (17%) Query: 61 YEKAVLFLKEQNFSKAYEYFN--QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y A +++ + A + + L + A Y++ +Y ++ + + Sbjct: 50 YRNATELYQKKEYENAAASLEPQLFASRA--TPLEDDVLFLLAQSYYASKQYLLSSDMYD 107 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + Q P S + Y++ SY Q+ DQ T+ ++ S + Y+ + A Sbjct: 108 RLLQQVPSSPYREASRYMLAKSYEQLSPAYERDQEYTRRAIEAFSEYLAEYSLNDAASTA 167 Query: 179 R------------------------FYVTVGR---------------NQLAAKEVEIGRY 199 R + + R ++L A I Sbjct: 168 RDLDTYSELLKIDPSRASYQRGYEAAKLAMARQDSVKYASAAIPVLHDKLGAATYSIATQ 227 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y+K +Y AA F+ V+ NY D ++A + LVE V +AR + + YP+ Sbjct: 228 YVKLKKYKAAAIYFENVVRNYGDTPWMKKAQSGLVEVQVKRGKWFDARRALDSYLQSYPE 287 Score = 40.1 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 28/67 (41%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A ++K + + A YF R++ +K+ VQ GK+ A + Y Sbjct: 222 YSIATQYVKLKKYKAAAIYFENVVRNYGDTPWMKKAQSGLVEVQVKRGKWFDARRALDSY 281 Query: 121 ITQYPES 127 + YPE Sbjct: 282 LQSYPED 288 >gi|118475750|ref|YP_892222.1| hypothetical protein CFF8240_1061 [Campylobacter fetus subsp. fetus 82-40] gi|118414976|gb|ABK83396.1| conserved hypothetical protein [Campylobacter fetus subsp. fetus 82-40] Length = 215 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 26/183 (14%), Positives = 73/183 (39%), Gaps = 10/183 (5%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 ++ F++++ VG ++ +++ + Y + + +K + A +++ + Sbjct: 7 SVIFAVSLLVFVGCSDKNDNELFNLTPDGW------YSQIIEDIKSNDLDSADKHYVSFA 60 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + + + + LL+ A +Y A +EYI +Y +++++ YL + Sbjct: 61 SEHVASPLLEQMLLILAQAHVDEEQYILANFYLDEYIKRYGTKQSIEFAQYLKIKANFDS 120 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--EIGRYYLK 202 +Q+ + + + + + Y N+ Y + R LA + + +I Y + Sbjct: 121 FTKPNRNQKLMQDSIYEIEKFLNAYPNTQYRPLIETMLVKFR--LAKQYLDTQIYDLYER 178 Query: 203 RGE 205 Sbjct: 179 TDR 181 >gi|82523886|emb|CAI78609.1| hypothetical protein [uncultured delta proteobacterium] Length = 275 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 15/142 (10%), Positives = 55/142 (38%), Gaps = 8/142 (5%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 ++ + + + ++ + Y +A + + ++ + F +P + S A Sbjct: 141 TTNNDHKPIMNFKKFPEDKYAEAKELYDKGLYKESKKAFEDFMGYYPEDKLTGNSQFWIA 200 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + + G Y+++ ++ + + V Y G++Y ++ D T ++ Sbjct: 201 EIYFKEGDYKKSIFEYQKLMDNFKGHPKVPSAYLKQGLAYYKI------DDSFTGKLI-- 252 Query: 162 MSRIVERYTNSPYVKGARFYVT 183 + ++++ + + A+ + Sbjct: 253 LEKLIKLFPGTEQANTAKNKLK 274 Score = 42.0 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 39/122 (31%), Gaps = 14/122 (11%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 YD+ K + + Y ++ I Y K G+Y + Sbjct: 167 YDKGLYKESKKAFEDFMGYYPEDKLTGNSQ--------------FWIAEIYFKEGDYKKS 212 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 I +Q ++ N+ A + AY + + ++ + + +P A + Sbjct: 213 IFEYQKLMDNFKGHPKVPSAYLKQGLAYYKIDDSFTGKLILEKLIKLFPGTEQANTAKNK 272 Query: 270 VK 271 +K Sbjct: 273 LK 274 >gi|303328462|ref|ZP_07358899.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3] gi|302861456|gb|EFL84393.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3] Length = 328 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 58/142 (40%), Gaps = 10/142 (7%) Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 W + S + V D+ +++ V + + +A F +++ +A ++ Sbjct: 190 WGQPSPQPVVQAPQKDISLA--LFDAGVNAFNARKYEEAQRSFTDFLKNYKDHNLAPEAQ 247 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 A + ++ AA + I +YP+S Y G+S++++ +Q A Sbjct: 248 YYLAECYFQRNQFADAALAYDTVIKKYPKSTRTPGAYLKQGISFSKI------NQGAAAK 301 Query: 158 MLQYMSRIVERYTNSPYVKGAR 179 M +++++ NSP A+ Sbjct: 302 AR--MQELIKKFPNSPEAARAK 321 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 14/119 (11%), Positives = 42/119 (35%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R + + + ++ Y + A++Y+ Y +R ++ A Sbjct: 221 RKYEEAQRSFTDFLKNYKDHNLAPEAQYYLAEC--------------YFQRNQFADAALA 266 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + V+ Y + A + ++ + A+ + + +++P A ++ +K Sbjct: 267 YDTVIKKYPKSTRTPGAYLKQGISFSKINQGAAAKARMQELIKKFPNSPEAARAKSFLK 325 >gi|149178098|ref|ZP_01856693.1| hypothetical protein PM8797T_14224 [Planctomyces maris DSM 8797] gi|148843018|gb|EDL57386.1| hypothetical protein PM8797T_14224 [Planctomyces maris DSM 8797] Length = 484 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 74/187 (39%), Gaps = 25/187 (13%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +++++ +N +A E P +A +L+++A G+Y A + Sbjct: 223 LFDRSRPVFDTEN--RALEALKSIWLHDPTGPLADDALMLTASHYLKKGRYMDA----DR 276 Query: 120 YITQ----YPESKNVDYVYYLVG-----MSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + YP+S ++ +++G MSY + YD K + + + Sbjct: 277 TFSLLREEYPKSPHLKDA-FMLGTHVKLMSY----QGPAYDATVLKDAGELKETTLRLFP 331 Query: 171 NSPYVKGARFY--VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + AR + A +E E +Y+++RG+ +A L++ +Y + A + Sbjct: 332 E---AQQARLKEELKKIEQAKAKREWETVQYWMRRGKPKSAAIYCNLLIEHYPTSPFANQ 388 Query: 229 AMARLVE 235 A L E Sbjct: 389 ARELLAE 395 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 87/253 (34%), Gaps = 46/253 (18%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+KA K Q++ KA + F + F + + M A Q++ KY A ++ Sbjct: 96 YQKANATFKAQDYKKAEKEFKAIVKKFKNDPIKEDAQFMVAESQFAQKKYSWAQDSYDQL 155 Query: 121 ITQYPESKNVDYV---YYLVGMSYAQ--------MIRDVPYD---------QRATKLMLQ 160 + +P S+++D +++ + Q I+ V + K Sbjct: 156 LVDFPSSRHLDQTTKRLFMIARYWLQEPSIVKGGDIQQVNLEDPGSETPEIPTDGKDRKS 215 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE----------VEIGRYYLKRGEYVAAI 210 + + + S V + + + +YLK+G Y+ A Sbjct: 216 RWALVPNLFDRSRPVFDTENRALEALKSIWLHDPTGPLADDALMLTASHYLKKGRYMDAD 275 Query: 211 PRFQLVLANYSDAEHAEEA---------MARLVEAYVALALMD---EAREVVSLIQERYP 258 F L+ Y + H ++A M+ AY A L D + L +P Sbjct: 276 RTFSLLREEYPKSPHLKDAFMLGTHVKLMSYQGPAYDATVLKDAGELKETTLRL----FP 331 Query: 259 QGYWARYVETLVK 271 + AR E L K Sbjct: 332 EAQQARLKEELKK 344 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 23/223 (10%), Positives = 57/223 (25%), Gaps = 68/223 (30%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + A + A Y++A + + ++ + ++V S + Sbjct: 94 AEYQKANATFKAQDYKKAEKEFKAIVKKFKNDPIKEDAQFMVAESQFAQKKYSW------ 147 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL-------------- 201 +++ + +S ++ + I RY+L Sbjct: 148 --AQDSYDQLLVDFPSSRHLDQTTKRL-----------FMIARYWLQEPSIVKGGDIQQV 194 Query: 202 ------------------KRGEYVAA-------------IPRFQLVLANY----SDAEHA 226 ++ + R L + A Sbjct: 195 NLEDPGSETPEIPTDGKDRKSRWALVPNLFDRSRPVFDTENRALEALKSIWLHDPTGPLA 254 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 ++A+ Y+ +A SL++E YP+ + L Sbjct: 255 DDALMLTASHYLKKGRYMDADRTFSLLREEYPKSPHLKDAFML 297 >gi|260062000|ref|YP_003195080.1| hypothetical protein RB2501_10422 [Robiginitalea biformata HTCC2501] gi|88783562|gb|EAR14733.1| hypothetical protein RB2501_10422 [Robiginitalea biformata HTCC2501] Length = 1006 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 64/201 (31%), Gaps = 24/201 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ + K +++ A +F + +R P + + + + +Y+ A ++ Sbjct: 504 YQMGYTYFKLRDYGNAATHFQRFARSAPDGARKTDAWMRLGDSYFVSSRYRPAIEAYDQ- 562 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 S DY Y +SY Q TK + + R+ NS A Sbjct: 563 -ALATGSPERDYAAYQKAISYG------FLGQEQTKR--DALDTFIGRFPNSSLKDDAL- 612 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 E+G Y++ AI + ++ + A R Y Sbjct: 613 -------------FELGNSYVQSAADNQAIASYDRLIRESPGSSLVPAAKMRKGLVYYNG 659 Query: 241 ALMDEAREVVSLIQERYPQGY 261 +A V + ++YP Sbjct: 660 GQNQQALTVFKEVADQYPNSQ 680 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 8/118 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+KA+ + + + FP + + +L + QA + + Sbjct: 576 YQKAISYGFLGQEQTKRDALDTFIGRFPNSSLKDDALFELGNSYVQSAADNQAIASYDRL 635 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 I + P S V G+ Y ++ + L + ++Y NS A Sbjct: 636 IRESPGSSLVPAAKMRKGLVYYNGGQN--------QQALTVFKEVADQYPNSQEAMQA 685 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 49/175 (28%), Gaps = 27/175 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + +++A Y + + + Y G Y+ A ++ Sbjct: 250 GESYFNLGRYAEAIPYLEKYQGKR--GRWNNTDYYLLGYAHYKQGDYENAI---RQFNKI 304 Query: 124 YPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 +V YY +G Y ++ + + L + + R Sbjct: 305 VGGDDSVAQNAYYHLGECYLELDKK--------QEALNAFRNASQM----EFSPEIRQDA 352 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 + +L+ Y Y Q + Y D E EE LV++Y Sbjct: 353 FLNYARLS---------YEVGNPYQPVPRVLQEYMEAYPDGEDHEEVRELLVDSY 398 Score = 43.2 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 64/218 (29%), Gaps = 26/218 (11%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 ++ YQ+ + V + + A E F + + +S A ++ G + Sbjct: 418 ASEATYQKVAFFYGVEQFLAEAYPGALESFEKAIQAGADPRYTARSRYWKAESAFAVGNF 477 Query: 111 QQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +QA + ++ + +Y Y +G +Y ++ R + R Sbjct: 478 EQALTQYAQFRASSAAASLEEYADLDYQMGYTYFKL--------RDYGNAATHFQRFARS 529 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + A + G Y Y AI + LA + + Sbjct: 530 APDGARKTDAWMRL--------------GDSYFVSSRYRPAIEAYDQALAT--GSPERDY 573 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 A + +Y L R+ + R+P Sbjct: 574 AAYQKAISYGFLGQEQTKRDALDTFIGRFPNSSLKDDA 611 >gi|226227346|ref|YP_002761452.1| hypothetical protein GAU_1940 [Gemmatimonas aurantiaca T-27] gi|226090537|dbj|BAH38982.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 285 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 16/136 (11%), Positives = 35/136 (25%), Gaps = 8/136 (5%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +++ + L + S A F + +P + + A Sbjct: 158 PPTGPGPNQLFTNGMDQLNRGSTSTARTLFQELITTYPTSDYVPDAQYWIAESLAKENNL 217 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + ++ +P S Y + Q Q +++ +Y Sbjct: 218 AAADAAYAAVVSAHPTSAKAPTALYKRA--------QLLLRQNNATQAKQLFEQVIAKYP 269 Query: 171 NSPYVKGARFYVTVGR 186 S A + R Sbjct: 270 RSNEAALAEETLKTLR 285 Score = 42.0 bits (98), Expect = 0.088, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 47/132 (35%), Gaps = 17/132 (12%) Query: 143 QMIRDVPYDQ---RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + DQ +T ++ Y S YV A++++ LA Sbjct: 165 NQLFTNGMDQLNRGSTSTARTLFQELITTYPTSDYVPDAQYWIAE---SLA--------- 212 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 K AA + V++ + + A A+ + + + +A+++ + +YP+ Sbjct: 213 --KENNLAAADAAYAAVVSAHPTSAKAPTALYKRAQLLLRQNNATQAKQLFEQVIAKYPR 270 Query: 260 GYWARYVETLVK 271 A E +K Sbjct: 271 SNEAALAEETLK 282 >gi|242309719|ref|ZP_04808874.1| competence lipoprotein [Helicobacter pullorum MIT 98-5489] gi|239523720|gb|EEQ63586.1| competence lipoprotein [Helicobacter pullorum MIT 98-5489] Length = 222 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 68/176 (38%), Gaps = 6/176 (3%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +S+ + LD V + Y+ + ++ + KA YF + + + + Sbjct: 19 GACSSKSNSGLALDEV--NKPADYWYQSMLKEIRNGDLEKADSYFTSLQSEHLNSPLLSE 76 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 ++L+ +Y AA +EY ++ +N+D++ +L + DQ+ Sbjct: 77 AMLILGRAHMQEEEYLLAAFYFDEYTKRFGNEQNIDFIKFLKLQANYFAFAKQFRDQQLL 136 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--EIGRYYLKRGEYVAA 209 +Q ++Y S Y + +LA + EI + Y K+ + AA Sbjct: 137 AKSIQEAQDFSQKYPYSRYRPMVDTMLLKL--ELANLSLNKEIIKLYNKKDKQQAA 190 >gi|325107331|ref|YP_004268399.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] gi|324967599|gb|ADY58377.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] Length = 1054 Score = 69.4 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 37/236 (15%), Positives = 73/236 (30%), Gaps = 31/236 (13%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 FF++ + SS D Y + ++ + A + Sbjct: 12 FFALLLILCGQVLSLSSSVALAAPADDE------YTLGITLYGQKRWDLAADTLKNYLET 65 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 +P + A + KY +A ++ +++ +P++KN Y V + Sbjct: 66 YPDHENVPLGKVYLAQSYVNQQKYAEARTILRDFLKAHPQNKNAAQAQYRVAECSYFLDD 125 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 K ++ +++ N + A Y+ YL+ G+ Sbjct: 126 --------YKAAIKDFQAFLDQNPNDALSEWALPYL--------------ADSYLRDGQP 163 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGY 261 A F+ L + + E+++ L AY A E LI P G Sbjct: 164 GKAELSFKQSLQTFPEGRFQEDSLFGLARAYELQNEPKSAIAEYQKLIAL--PDGD 217 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 67/198 (33%), Gaps = 30/198 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A +L++ KA F Q + FP SL A + + A + ++ I Sbjct: 154 ADSYLRDGQPGKAELSFKQSLQTFPEGRFQEDSLFGLARAYELQNEPKSAIAEYQKLIAL 213 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 P+ +GM Y Q Q+ L + + + + Y S V A Sbjct: 214 -PDGDRAAEALVNLGMLYFQ--------QQNYNLAAEVFTLLAKDYPESSLVPLAN---- 260 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL--ANYSDAEHAEEAMARLVEAYVALA 241 + G Y ++ AI R +L YS A L + Y + Sbjct: 261 ----------LNAGYAYYSLNQWDKAIERLELAKTSEAYSAT-----AQYWLAQTYKSQG 305 Query: 242 LMDEAREVVSLIQERYPQ 259 +D+A + + +++ P Sbjct: 306 QIDKAIQQLEELRQNNPS 323 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 67/187 (35%), Gaps = 27/187 (14%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 R + +L+ ++QN++ A E F ++D+P + + + L + + YS ++ Sbjct: 214 PDGDRAAEALVNLGMLYFQQQNYNLAAEVFTLLAKDYPESSLVPLANLNAGYAYYSLNQW 273 Query: 111 QQAASLGEEYITQYPESK-NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 +A E S+ Y + +Y Q +Q + + + Sbjct: 274 DKAIERLE----LAKTSEAYSATAQYWLAQTY--------KSQGQIDKAIQQLEELRQNN 321 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 + + V ++ Y ++ Y A +Q L +S + AE A Sbjct: 322 P----SEDLQPRVVY----------QLADTYFQQASYAKAAGVYQEYLKAFSTGDQAEAA 367 Query: 230 MARLVEA 236 LVE+ Sbjct: 368 WLHLVES 374 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 32/126 (25%), Gaps = 11/126 (8%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGV--ARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + NF +A + F A +S A Y+ A Sbjct: 936 GRSYIAQANFDQARQTFQAVLDRIAGQKTLAAAQSQFYLAETSLMQKNYEDALKEYIRVA 995 Query: 122 TQYPESKNVDYV-YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +P ++ + G + +Q + Y S + A Sbjct: 996 VLFPGFPDLQSAALFQAGQCDEVL--------GHPTQAIQSYENLRRLYPESEFASRAAE 1047 Query: 181 YVTVGR 186 + R Sbjct: 1048 RIEKLR 1053 >gi|118580269|ref|YP_901519.1| hypothetical protein Ppro_1849 [Pelobacter propionicus DSM 2379] gi|118502979|gb|ABK99461.1| hypothetical protein Ppro_1849 [Pelobacter propionicus DSM 2379] Length = 297 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 8/110 (7%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 F+ E + +A + + FP + + A Y +Y+ A + Sbjct: 41 GDAFMAEGEYYRAITEYKKLIILFPASRRVEDAGFRIAMAYYRGEEYEAAVRAFAAFQVN 100 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 +P S Y GMS+ + R + SR+V Y +S Sbjct: 101 HPGSGYAPQAGYYEGMSHLGLNR--------PEKAENSFSRVVATYPDSD 142 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 26/171 (15%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + L + G+Y +A + ++ I +P S+ V+ + + M+Y + Sbjct: 33 TEEVQLKLGDAFMAEGEYYRAITEYKKLIILFPASRRVEDAGFRIAMAYYRG-------- 84 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + ++ + + S Y A +Y G + L A Sbjct: 85 EEYEAAVRAFAAFQVNHPGSGYAPQAGYY--EGMSHLG------------LNRPEKAENS 130 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEA--REVVSLIQERYPQGY 261 F V+A Y D++ A+ L + + D A R+ + YP Sbjct: 131 FSRVVATYPDSDSGRRAL--LGNSLIRFDRKDTAGCRQQLERYLADYPGDE 179 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 39/110 (35%), Gaps = 14/110 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + +++ + S V+ A F + + Y + EY AA+ F Sbjct: 52 RAITEYKKLIILFPASRRVEDAGFRIAMA--------------YYRGEEYEAAVRAFAAF 97 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 N+ + +A +A +++ L ++A S + YP R Sbjct: 98 QVNHPGSGYAPQAGYYEGMSHLGLNRPEKAENSFSRVVATYPDSDSGRRA 147 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 52/146 (35%), Gaps = 9/146 (6%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + + + R + + A+ + + + + A F + P +G A ++ Sbjct: 58 KKLIILFPASRRVEDAGFRIAMAYYRGEEYEAAVRAFAAFQVNHPGSGYAPQAGYYEGMS 117 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + ++A + + YP+S + + +IR +D++ T Q + Sbjct: 118 HLGLNRPEKAENSFSRVVATYPDSDSG-----RRALLGNSLIR---FDRKDTAGCRQQLE 169 Query: 164 RIVERYTNSPYVKGARFYVTVG-RNQ 188 R + Y +++ RN+ Sbjct: 170 RYLADYPGDERAHNVSEAISLLDRNR 195 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 32/70 (45%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +++G ++ GEY AI ++ ++ + + E+A R+ AY + A + Sbjct: 38 LKLGDAFMAEGEYYRAITEYKKLIILFPASRRVEDAGFRIAMAYYRGEEYEAAVRAFAAF 97 Query: 254 QERYPQGYWA 263 Q +P +A Sbjct: 98 QVNHPGSGYA 107 >gi|82523862|emb|CAI78810.1| hypothetical protein [uncultured candidate division WS3 bacterium] Length = 310 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 45/126 (35%), Gaps = 8/126 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y++A L + + A + F +++P A + Y + A + Sbjct: 192 YDRAYLDFSKGKYQLAIQGFTDYLKNYPGTERADNAQYWIGECYYVQRDHDSAIEAFQRV 251 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + QYP+ +G + + R+ + ++ + ++ERY + + AR Sbjct: 252 LDQYPDGNKAPGAMLKIGYALLSLDRE--------REAIRQLKTVMERYPQTSEAEHARA 303 Query: 181 YVTVGR 186 + Sbjct: 304 KLLSLN 309 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 22/138 (15%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + A++ +S GKYQ A +Y+ YP ++ D Y +G Y V D + Sbjct: 190 AAYDRAYLDFSKGKYQLAIQGFTDYLKNYPGTERADNAQYWIGECYY-----VQRDHDS- 243 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 ++ R++++Y + GA + L +R AI + + Sbjct: 244 --AIEAFQRVLDQYPDGNKAPGAMLKIGYALLSLDR----------ERE----AIRQLKT 287 Query: 216 VLANYSDAEHAEEAMARL 233 V+ Y AE A A+L Sbjct: 288 VMERYPQTSEAEHARAKL 305 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 14/113 (12%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 +L +Q + ++ Y + A++++ YY++R +AI FQ Sbjct: 205 QLAIQGFTDYLKNYPGTERADNAQYWIGEC-------------YYVQRDH-DSAIEAFQR 250 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 VL Y D A AM ++ A ++L EA + + ERYPQ A + Sbjct: 251 VLDQYPDGNKAPGAMLKIGYALLSLDREREAIRQLKTVMERYPQTSEAEHARA 303 >gi|225851488|ref|YP_002731722.1| tetratricopeptide repeat domain protein [Persephonella marina EX-H1] gi|225645952|gb|ACO04138.1| tetratricopeptide repeat domain protein [Persephonella marina EX-H1] Length = 934 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 100/245 (40%), Gaps = 27/245 (11%) Query: 28 FSIAVCFLVGWERQSSRDV--YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 F +A F+ + +RD+ L D Q+ Y A + E + +A + F + Sbjct: 531 FLLAYIFMRKGDIDKARDILRELSKGDDKIAQQAGYLYAYSYFSEGKYIEAIKAFRDYAE 590 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 + + ++L A Y+AG+ ++A + +++I ++ + Y + Sbjct: 591 KYRGTELGNLAVLRMADSYYNAGQKEKARKIYQQFIEEHANTPEAIDAAY--------QL 642 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 + ++ + Q + +E+Y P+V + +++G Y ++ E Sbjct: 643 TVLEMEESGADVASQI-EKFIEKYPQYPFVSLLK--------------LQLGDLYTEKQE 687 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 Y A ++ ++ D + +E A+ +L D+A ++++ + YP+G + Sbjct: 688 YDKAEKIYRELIEA--DIKESEYALYKLGYLKYISGDKDQAVKILTRYIKIYPRGEFNVQ 745 Query: 266 VETLV 270 + L+ Sbjct: 746 AKELL 750 Score = 42.8 bits (100), Expect = 0.050, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 63/214 (29%), Gaps = 36/214 (16%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + +Y+ L + +A + + + +P ++ + A + G +A Sbjct: 704 KESEYALYKLGYLKYISGDKDQAVKILTRYIKIYPRGEFNVQAKELLAKIFEEQGDLDKA 763 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 ++ ++ D + + M + R Y I R+ Sbjct: 764 IAVMKKL-------PATDENKFKLAMLLYKAGRYT--------EAKSYFEEIYTRFPKYR 808 Query: 174 ---------------YVKGARFYVTVG-----RNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 Y + A Y+ N +A IG Y K + A+ F Sbjct: 809 ADIAFYLGKIQFENGYFQNALRYLEEALNSSDYNNVAESYYLIGLIYEKLEDIENALNSF 868 Query: 214 QLVLANYSD-AEHAEEAMARLVEAYVALALMDEA 246 V+ Y D E +A ++ E EA Sbjct: 869 INVIYLYPDATEQVIKARLKVAEIMKKQGRRSEA 902 Score = 35.9 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 23/68 (33%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 +V + + + + N+ A E + + +P G + + + + Y Sbjct: 83 EKPQAVLGIPEKNALLADGIESFFRGNYITAREKLEKLIKKYPKTGFSGTAHYLLGLIYY 142 Query: 106 SAGKYQQA 113 ++A Sbjct: 143 RMDNKKEA 150 >gi|326802361|ref|YP_004320180.1| Tetratricopeptide TPR_1 repeat-containing protein [Sphingobacterium sp. 21] gi|326553125|gb|ADZ81510.1| Tetratricopeptide TPR_1 repeat-containing protein [Sphingobacterium sp. 21] Length = 845 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 68/209 (32%), Gaps = 27/209 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y A + +FS A +YF + + S Y +A Sbjct: 354 YGLAYAAFRNDSFSIAADYFERFLAVEGSSLEENMRHDVIARLGDSYLSLRNYDRANEYY 413 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 ++ I ++ N DY + G+ I+ + D A L + ++E++ S Y Sbjct: 414 DQLI--NSKAPNQDYALFQRGI-----IQGLQGDNEAK---LSTLRSVIEQFPGSNYADD 463 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 E+ Y +Y AAI Q ++ Y + + A+ + Sbjct: 464 VA--------------FEVPYTYFITEDYDAAIEGLQQMIEQYPRSSYVPRALMTIGLVQ 509 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYV 266 + A+ + E+YP A+ Sbjct: 510 YNKDETEAAKATFQRVVEKYPTTEEAKQA 538 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 69/238 (28%), Gaps = 40/238 (16%) Query: 45 DVYLDSVTDVRYQRE---VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 + Y D + + + + ++++ ++ + + FP + A Sbjct: 410 NEYYDQLINSKAPNQDYALFQRGIIQGLQGDNEAKLSTLRSVIEQFPGSNYADDVAFEVP 469 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + + Y A ++ I QYP S V +G+ T+ Sbjct: 470 YTYFITEDYDAAIEGLQQMIEQYPRSSYVPRALMTIGLVQYNKDE--------TEAAKAT 521 Query: 162 MSRIVERYTNSPYVK--------------GARFYVTVG------------RNQLAAKEVE 195 R+VE+Y + K A Y+ ++ LA + Sbjct: 522 FQRVVEKYPTTEEAKQALRSIENIYLDQGDASSYIQYATGANIGDLSTAEQDNLA---FQ 578 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + RGEY A+ + + A + EA +++I Sbjct: 579 VANSLFTRGEYGPAVEAINAYFDKFPKPIQEKHARYIRGVSLYHTGHPKEALHDLNII 636 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 82/236 (34%), Gaps = 32/236 (13%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKY 110 D+ YQ+ Y + + F E+ F + F + + FP A +A + A Y KY Sbjct: 269 ADMVYQKVTYYRGLEFYNERAFENSISLFMRSEK-FPIDAEMAALATYWKAEAMYEVRKY 327 Query: 111 QQAASLGEEYITQYPESKNV---DYVYYLVGMSYAQMIRDVPYDQRATKLML-------- 159 ++A ++ P ++N +Y Y G++YA D Sbjct: 328 REAVENFSRFLRL-PAARNTNVYNYANY--GLAYAAFRNDSFSIAADYFERFLAVEGSSL 384 Query: 160 --QYMSRIVERYTNS----PYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-------GEY 206 ++ R +S A Y N A + +R G+ Sbjct: 385 EENMRHDVIARLGDSYLSLRNYDRANEYYDQLINSKAPNQDYAL---FQRGIIQGLQGDN 441 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 A + + V+ + + +A++ + Y D A E + + E+YP+ + Sbjct: 442 EAKLSTLRSVIEQFPGSNYADDVAFEVPYTYFITEDYDAAIEGLQQMIEQYPRSSY 497 >gi|91202534|emb|CAJ72173.1| hypothetical protein kustd1428 [Candidatus Kuenenia stuttgartiensis] Length = 611 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 29/220 (13%), Positives = 61/220 (27%), Gaps = 22/220 (10%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 D + YE + A + + + + + A+ +L Y Sbjct: 244 PNDKMVVKAYYELGNYYYDLGFNFLALQEYQVVVKKYITSLFAKDALFKIGDCYYRLNDP 303 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + A ++I YP+ + I D Q R++ Y Sbjct: 304 ESAIRAYFQFIYGYPKDPLIADA--------FMGIGDSLMMQGFYVRAKDTYERVLNGYP 355 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 + A+ + I + K +Y AI Y+ + E Sbjct: 356 EAEIAAKAQ--------------LNIAKALAKMEKYREAIRALMEARELYNSLQVGVEIE 401 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + + +L ++A+ V+ +A L+ Sbjct: 402 YLIGKCLFSLKEYEDAKTVLGNFLANAGNERYAEDASFLL 441 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 67/221 (30%), Gaps = 43/221 (19%) Query: 45 DVYLDSVTDVRYQREVYEK-----------AVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + Y +++ + RE+Y + + A + A Sbjct: 375 EKYREAIRALMEARELYNSLQVGVEIEYLIGKCLFSLKEYEDAKTVLGNFLANAGNERYA 434 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY-----LVGMSYAQMIRDV 148 + + Y+ Y +A + + + YP S NV Y L M + Sbjct: 435 EDASFLLGECFYNNENYVEAFQVFKRALETYPNSSNVPRGMYFLGKSLRAMHFYDS---- 490 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 ++ ++ + + Y +++A +EIG Y Y Sbjct: 491 ---------AIKTFREGIQFWPTNEYA-----------DKMA---MEIGWCYFDDDNYAR 527 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A F+ + Y ++ E M L +A ++A + Sbjct: 528 AQEGFKDFIKKYPYSKVLIEGMVGLADALFCEKKYEQAVKA 568 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 70/228 (30%), Gaps = 45/228 (19%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + + + +A + + + +P A +A K+ L A KY++A E Sbjct: 331 GDSLMMQGFYVRAKDTYERVLNGYPEAEIAAKAQLNIAKALAKMEKYREAIRALMEAREL 390 Query: 124 YPESKNVD-YVYYLVGMSYAQM-----------------------------IRDVPYDQR 153 Y S V + YL+G + + + Y+ Sbjct: 391 Y-NSLQVGVEIEYLIGKCLFSLKEYEDAKTVLGNFLANAGNERYAEDASFLLGECFYNNE 449 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 Q R +E Y NS V + K + +Y +AI F Sbjct: 450 NYVEAFQVFKRALETYPNSSNVP---RGMYFL-----GKSLRAMHFYD------SAIKTF 495 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + + E+A++ + Y A+E ++YP Sbjct: 496 REGIQFWPTNEYADKMAMEIGWCYFDDDNYARAQEGFKDFIKKYPYSK 543 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 22/177 (12%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 KA + + + +P + K+ Y G A + + +Y S Sbjct: 230 DKAAQIYQRAQIKYPNDKMVVKAYYELGNYYYDLGFNFLALQEYQVVVKKYITSLFAKDA 289 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + +G Y ++ + ++ + + Y P + A Sbjct: 290 LFKIGDCYYRLND--------PESAIRAYFQFIYGYPKDPLIADAF-------------- 327 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 + IG + +G YV A ++ VL Y +AE A +A + +A + EA + Sbjct: 328 MGIGDSLMMQGFYVRAKDTYERVLNGYPEAEIAAKAQLNIAKALAKMEKYREAIRAL 384 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 25/51 (49%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + + N+++A E F + +P++ V + ++ A + KY+QA Sbjct: 519 YFDDDNYARAQEGFKDFIKKYPYSKVLIEGMVGLADALFCEKKYEQAVKAY 569 >gi|149196489|ref|ZP_01873543.1| hypothetical protein LNTAR_08364 [Lentisphaera araneosa HTCC2155] gi|149140169|gb|EDM28568.1| hypothetical protein LNTAR_08364 [Lentisphaera araneosa HTCC2155] Length = 364 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 67/183 (36%), Gaps = 5/183 (2%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YEK+ + +A E++ P++ A S+L +Q A S + Sbjct: 104 YEKSGSSNFFGSSEEAIEFYEALIAQAPYSKGASTSMLRIGMLQQDDNDDIAAMSTYHKL 163 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I YP+S Y + +R + + + + + +Y P + A+ Sbjct: 164 IATYPKSDEAGYARIYIAQFNIFSMRGIHGNLELMREAKTQLRLFINQYNKHPLLSEAKD 223 Query: 181 YVTVGRNQLAAKEVEIGRYYLK-RGEYVAAIPRFQL-VLANYSDAEH--AEEA-MARLVE 235 + A + + +YL AA R+ V+ +Y D E EA + +L + Sbjct: 224 QLASLEEVEAERTYNLALFYLDPVHSRPAAAKRYLYKVVVDYPDTEAAVVAEAKLEKLDK 283 Query: 236 AYV 238 +Y Sbjct: 284 SYK 286 >gi|224826142|ref|ZP_03699245.1| tol-pal system protein YbgF [Lutiella nitroferrum 2002] gi|224601779|gb|EEG07959.1| tol-pal system protein YbgF [Lutiella nitroferrum 2002] Length = 258 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 42/125 (33%), Gaps = 8/125 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+KA+ L+ ++F A E + P A A ++ + +Y A + + Sbjct: 142 YDKAIALLRNRDFPHATEALKRFIDQNPGAVEAVDAMYWLGVAHAAQRQYDAAIDIHRRF 201 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + + P + I + D + + R+++ Y S A+ Sbjct: 202 VERNPNHPKAPDAL--------RNIANCQRDLGQVDVAKATLHRLIKLYPKSAAAVKAKE 253 Query: 181 YVTVG 185 + Sbjct: 254 QLKQM 258 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 22/137 (16%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A + A + +I Q P + Y +G+++A QR Sbjct: 143 DKAIALLRNRDFPHATEALKRFIDQNPGAVEAVDAMYWLGVAHAA--------QRQYDAA 194 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + R VER N P A + + L V++ + A + R ++ Sbjct: 195 IDIHRRFVERNPNHPKAPDALRNIANCQRDLGQ--VDVAK---------ATLHR---LIK 240 Query: 219 NYSDAEHAEEAMARLVE 235 Y + A +A +L + Sbjct: 241 LYPKSAAAVKAKEQLKQ 257 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 16/114 (14%), Positives = 41/114 (35%), Gaps = 14/114 (12%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + + R +++ + A +++ V + +Y AAI + + Sbjct: 157 ATEALKRFIDQNPGAVEAVDAMYWLGVA---------HAAQ-----RQYDAAIDIHRRFV 202 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + A +A+ + L +D A+ + + + YP+ A + +K Sbjct: 203 ERNPNHPKAPDALRNIANCQRDLGQVDVAKATLHRLIKLYPKSAAAVKAKEQLK 256 >gi|194290405|ref|YP_002006312.1| periplasmic protein, associated to tol-pal complex [Cupriavidus taiwanensis LMG 19424] gi|193224240|emb|CAQ70249.1| periplasmic protein, associated to Tol-Pal complex [Cupriavidus taiwanensis LMG 19424] Length = 252 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 46/126 (36%), Gaps = 8/126 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A+ + +F A F+ + +P + + Y+ Y+ + + + Sbjct: 135 YDAALKQFQAGDFKSAGNSFSAFVKKYPQSPYLPLAQYWLGNSLYAQRDYKGSTFVLQNM 194 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + P V ++ ++ Q+ Q+A + + ++V +Y + + A Sbjct: 195 VNANPTHPKVPDA--MIAIANNQLESG----QKAA--ARKTLEQVVAKYPGTEGAQAASN 246 Query: 181 YVTVGR 186 + + Sbjct: 247 RLKTLK 252 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 22/140 (15%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 K +A Q+ AG ++ A + ++ +YP+S + Y +G S D + Sbjct: 131 EKPEYDAALKQFQAGDFKSAGNSFSAFVKKYPQSPYLPLAQYWLGNSLYAQ-----RDYK 185 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 + +LQ M V P V A + + NQL + G+ AA Sbjct: 186 GSTFVLQNM---VNANPTHPKVPDA--MIAIANNQL------------ESGQKAAARKTL 228 Query: 214 QLVLANYSDAEHAEEAMARL 233 + V+A Y E A+ A RL Sbjct: 229 EQVVAKYPGTEGAQAASNRL 248 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K S V++Y SPY+ A++++ N L Y +R Y + Sbjct: 145 GDFKSAGNSFSAFVKKYPQSPYLPLAQYWLG---NSL----------YAQRD-YKGSTFV 190 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Q ++ +AM + + AR+ + + +YP A+ +K Sbjct: 191 LQNMVNANPTHPKVPDAMIAIANNQLESGQKAAARKTLEQVVAKYPGTEGAQAASNRLK 249 >gi|218780988|ref|YP_002432306.1| tol-pal system protein YbgF [Desulfatibacillum alkenivorans AK-01] gi|218762372|gb|ACL04838.1| tol-pal system protein YbgF [Desulfatibacillum alkenivorans AK-01] Length = 302 Score = 68.6 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 51/145 (35%), Gaps = 8/145 (5%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 + + + Y +A E KA E F FP + A +L Sbjct: 166 TQTEAQTAPVPAKELDEDQAYAQAKKDFDEMRLEKAREGFKNFLARFPNSSKADNALFWM 225 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + Y++A ++ I ++P++ V Y+ G++++ + + Sbjct: 226 GETFFKEKWYEKAILQYQDVIEKHPKANKVPAAYFKQGLAFSMLGDNSN--------ARL 277 Query: 161 YMSRIVERYTNSPYVKGARFYVTVG 185 + +++++ NS A+ + Sbjct: 278 IWTELIKKFPNSAEAGWAQKKLDAL 302 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 14/120 (11%) Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 +D+ + + + R+ NS A F++ G + K Y Sbjct: 192 DFDEMRLEKAREGFKNFLARFPNSSKADNALFWM--------------GETFFKEKWYEK 237 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 AI ++Q V+ + A A + A+ L AR + + + +++P A + + Sbjct: 238 AILQYQDVIEKHPKANKVPAAYFKQGLAFSMLGDNSNARLIWTELIKKFPNSAEAGWAQK 297 >gi|218961350|ref|YP_001741125.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] gi|167730007|emb|CAO80919.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] Length = 976 Score = 68.6 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 78/215 (36%), Gaps = 30/215 (13%) Query: 46 VYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLMSAFV 103 YL + + E+Y + +++N+++A Q R++ + + + + A Sbjct: 342 TYLKQTPNELMKAELYYTLGYFYFQQKNYTEAIRQLGQA-RNYETSRELNSRIDFLIAEA 400 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQYM 162 Y AG A Y+++YP D Y+ +G +S+ + + Sbjct: 401 FYFAGNSNLAKDAFNRYLSRYPSGNKADKAYFYLGYLSFQE---------KDYTEAKNNF 451 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 ++ Y S Y A +Y LA + + Y L +Y+ + + Sbjct: 452 QELINLYPESFYCNEALYY-------LAEMDFYLANYNLALKKYL-------YLYEKNPE 497 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 E A+ R+ + Y + D++ + + Y Sbjct: 498 NEVI--AL-RIAQIYFYIGDYDQSENFLQNLVPNY 529 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 66/211 (31%), Gaps = 42/211 (19%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGE 118 Y + + L ++N A E + P K+ L + + Y +A Sbjct: 321 YLERLKLLFKKNPQNAIEQLQTYLKQTP--NELMKAELYYTLGYFYFQQKNYTEAIRQLG 378 Query: 119 EYITQYPESKN--------VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + Y S+ + +Y G S L +R + RY Sbjct: 379 Q-ARNYETSRELNSRIDFLIAEAFYFAGNSN---------------LAKDAFNRYLSRYP 422 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 + A FY+ + +Y A FQ ++ Y ++ + EA+ Sbjct: 423 SGNKADKAYFYLGYLS--------------FQEKDYTEAKNNFQELINLYPESFYCNEAL 468 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261 L E LA + A + + E+ P+ Sbjct: 469 YYLAEMDFYLANYNLALKKYLYLYEKNPENE 499 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 38/273 (13%), Positives = 87/273 (31%), Gaps = 61/273 (22%) Query: 28 FSIAVCFLVGWERQSSRDVYLDS----VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 F IA F ++D + + + + + L +E+++++A F + Sbjct: 395 FLIAEAFYFAGNSNLAKDAFNRYLSRYPSGNKADKAYFYLGYLSFQEKDYTEAKNNFQEL 454 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN-------VDYVYYL 136 +P + ++L A + + Y A ++Y+ Y ++ + +Y+ Sbjct: 455 INLYPESFYCNEALYYLAEMDFYLANYNLAL---KKYLYLYEKNPENEVIALRIAQIYFY 511 Query: 137 VG----MSYAQMIRDVPYD-----------QRATKLMLQYM------------------S 163 +G YD ++ L+ Sbjct: 512 IGDYDQSENFLQNLVPNYDICLLKGNIMLAKKNYSPALEQFLLAEGFATDNVRKIEAQSY 571 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQ--------LAAKEVEIGRYYLKRGEYVAAIPRFQL 215 R + Y + + Y+ + R + LAAK R +Y A+ + Sbjct: 572 RALCLYQMKRFKDASTLYLKLSREKESPDTYLFLAAKSAYAAR------DYHLALELYNN 625 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 + Y ++ H EA+ + Y + + A + Sbjct: 626 FIDKYPESSHFLEALTDIANTYYNMGNYERAVD 658 >gi|73540501|ref|YP_295021.1| TPR repeat-containing protein [Ralstonia eutropha JMP134] gi|72117914|gb|AAZ60177.1| TPR repeat [Ralstonia eutropha JMP134] Length = 252 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 16/141 (11%), Positives = 49/141 (34%), Gaps = 8/141 (5%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V T ++ Y+ A+ + +F + F + +P + + Y Sbjct: 120 VEGREGTVQPNEKPEYDAALKQFQAGDFKSSGNSFAAFVKKYPQSPYLPLAQYWLGNALY 179 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + Y+ + ++ + + P ++ ++ Q+ Q+A + + ++ Sbjct: 180 AQRDYKGSTTVLQNMLQANPTHPKAPDA--MIAIANNQLESG----QKAA--ARKTLEQV 231 Query: 166 VERYTNSPYVKGARFYVTVGR 186 V +Y + + A + + Sbjct: 232 VAKYPGTEGAQAASNRLKTLK 252 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + V++Y SPY+ A++++ N L Y +R Y + Sbjct: 145 GDFKSSGNSFAAFVKKYPQSPYLPLAQYWLG---NAL----------YAQRD-YKGSTTV 190 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Q +L A +AM + + AR+ + + +YP A+ +K Sbjct: 191 LQNMLQANPTHPKAPDAMIAIANNQLESGQKAAARKTLEQVVAKYPGTEGAQAASNRLK 249 >gi|189459860|ref|ZP_03008645.1| hypothetical protein BACCOP_00490 [Bacteroides coprocola DSM 17136] gi|189433470|gb|EDV02455.1| hypothetical protein BACCOP_00490 [Bacteroides coprocola DSM 17136] Length = 1007 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 71/220 (32%), Gaps = 46/220 (20%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +YE+ F++ ++ A + ++ + +P + ++R++ + Y KY Sbjct: 614 PESQYLDDALYEQGRAFVQLEDNDNAVKRYSLLVQRYPESPLSRRAANEIGLLYYQNDKY 673 Query: 111 QQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPYD- 151 +A + ++ I+ YP S+ DY+ ++ + D Sbjct: 674 NEAIAAYKKVISTYPGSEEARLAQRDLKSIYIDLNRVDDYMAFVSTIPGGANFDVNERDS 733 Query: 152 -----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 + R ++ + + A +Y+ + Sbjct: 734 LTYVAAERVYMRGNITEAKNSFVRYLQSFPQGAFSVDAHYYLGLID-------------- 779 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVA 239 Y A+ V+ Y D + + EAMA + AY Sbjct: 780 YNEKNYTGAVSHLDKVVE-YPDNKFSGEAMAMCADIAYRE 818 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 24/153 (15%) Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 +Y + L IT +PES+ +D Y G ++ Q+ + ++ S +V Sbjct: 596 QREYGKKIELLNRLITGFPESQYLDDALYEQGRAFVQLEDN--------DNAVKRYSLLV 647 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 +RY SP + A EIG Y + +Y AI ++ V++ Y +E A Sbjct: 648 QRYPESPLSRRAAN--------------EIGLLYYQNDKYNEAIAAYKKVISTYPGSEEA 693 Query: 227 EEAMARLVEAYVALALMDEAREVVSLI--QERY 257 A L Y+ L +D+ VS I + Sbjct: 694 RLAQRDLKSIYIDLNRVDDYMAFVSTIPGGANF 726 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 84/236 (35%), Gaps = 36/236 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115 ++ + F A EYF+Q + +++ + + +Y +Y AAS Sbjct: 435 LFRLGTQAFAQAAFENAIEYFSQSLQL---GRYNQQTQADAYYWRGESKYRLEQYGAAAS 491 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER--YTNSP 173 +Y+ P+ ++ +Y G++ + Q+ L + +R E + Sbjct: 492 DYRQYLEFAPDRRSTEY-----GLALYNLGYTAFK-QKQYDKALTWFTRCAESGIRLEND 545 Query: 174 YVKGARFYVTVGR-------------NQLAAKEVEIGRYYL--------KRGEYVAAIPR 212 V + Q + + + Y L + EY I Sbjct: 546 VVADVYNRMGDCNFYARRFDAADAQYAQASGYSMSLSDYSLFQQSIIKGLQREYGKKIEL 605 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 ++ + ++++ ++A+ A+V L D A + SL+ +RYP+ +R Sbjct: 606 LNRLITGFPESQYLDDALYEQGRAFVQLEDNDNAVKRYSLLVQRYPESPLSRRAAN 661 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 52/151 (34%), Gaps = 23/151 (15%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + Y A ++ Q P++ D Y++ + ++ ++ + Sbjct: 42 FLRRDYAAAQQTLSRFVQQKPQASLADEAAYMIACTSYELKSP---------DCIKQLEG 92 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +E+Y +S Y + I Y + +Y AI F+ + Sbjct: 93 YLEQYPDSRYANRVQS--------------LIASAYFFQEKYPEAIACFKGCQFDLLADS 138 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + R+ AY+ + + EA S+++E Sbjct: 139 ERDACTLRMGTAYLKMGNLQEAAVWFSILKE 169 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 82/262 (31%), Gaps = 49/262 (18%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR--KSLLMS 100 S+ + L Y + + + + A + Q P +L Sbjct: 456 SQSLQLGRYNQQTQADAYYWRGESKYRLEQYGAAASDYRQYLEFAPDRRSTEYGLALYNL 515 Query: 101 AFVQYSAGKYQQAAS----LGEEYITQYPESKNVDYVYYLVG------------------ 138 + + +Y +A + E I E+ V VY +G Sbjct: 516 GYTAFKQKQYDKALTWFTRCAESGIRL--ENDVVADVYNRMGDCNFYARRFDAADAQYAQ 573 Query: 139 -------MSYAQMIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 +S + + + QR ++ ++R++ + S Y+ A Sbjct: 574 ASGYSMSLSDYSLFQQSIIKGLQREYGKKIELLNRLITGFPESQYLDDAL---------- 623 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 E GR +++ + A+ R+ L++ Y ++ + A + Y +EA Sbjct: 624 ----YEQGRAFVQLEDNDNAVKRYSLLVQRYPESPLSRRAANEIGLLYYQNDKYNEAIAA 679 Query: 250 VSLIQERYPQGYWARYVETLVK 271 + YP AR + +K Sbjct: 680 YKKVISTYPGSEEARLAQRDLK 701 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 51/209 (24%), Gaps = 54/209 (25%) Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 + +P + A + + A + KY +A + + Sbjct: 85 DCIKQLEGYLEQYPDSRYANRVQSLIASAYFFQEKYPEAIACFKG--------------- 129 Query: 135 YLVGMSYAQMIRDVPYD------------QRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 ++ D D + + S + E +S Y A +++ Sbjct: 130 -----CQFDLLADSERDACTLRMGTAYLKMGNLQEAAVWFSILKEV--SSEYHIDAVYHL 182 Query: 183 TVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + I +L RG Y A L Y Sbjct: 183 AYIDYVQKQYDKALQGFREAGESSKYAALSPYYIADIHLVRGNYQQARQIASTYLEAYPR 242 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS 251 E A E EA L A + +S Sbjct: 243 QEKAIEMKRICGEACYGLKQYAAAIDYLS 271 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 18/166 (10%), Positives = 46/166 (27%), Gaps = 22/166 (13%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 Y + + +Y+ + F +S+A + + + + + L Sbjct: 272 AYRSETEEHAERNSLYKLGMSFFYTGVYSEAAAALGEVTTV--QDALTQNAYLHMGLAYL 329 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + +A E+ + + +Y + + + R Sbjct: 330 QLKERNRARMAFEQASAMNYDRDIKEQAFYNYALCIHETSYS------PFAESVTVFERF 383 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + NS Y + Y+ Y+ Y+AA+ Sbjct: 384 LNEFPNSVYTEKVNDYLIEV--------------YMNTRSYMAALN 415 >gi|297171139|gb|ADI22150.1| uncharacterized protein conserved in bacteria [uncultured myxobacterium HF0200_19H16] Length = 283 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 52/135 (38%), Gaps = 10/135 (7%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAG 108 S T+ ++ +A+ ++ ++ A +F++ + A +L +++ Sbjct: 151 SSTEDPAASLLFTQALGAYQKGKYNDAILFFDEFIRAFEESSKYA-DALYWLGECEFAKE 209 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 Y + + + Y+ P+ V +G+SY ++ A + +++ R Sbjct: 210 NYGNSIAAYKRYLKLEPKGDKGADVLLKLGLSYERLH--------AFNEAAVFFKKLLLR 261 Query: 169 YTNSPYVKGARFYVT 183 + S A+ ++ Sbjct: 262 FPGSALADLAKAHLK 276 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 39/135 (28%), Gaps = 27/135 (20%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y GKY A +E+I + ES Y +G + R Sbjct: 169 YQKGKYNDAILFFDEFIRAFEESSKYADALYWLGECEFAK--------ENYGNSIAAYKR 220 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 ++ + + +L + A F+ +L + + Sbjct: 221 YLKLEPKGDKGADVLLKLGLSYERL--------------HAFNEAAVFFKKLLLRFPGS- 265 Query: 225 HAEEAMARLVEAYVA 239 A+A L +A++ Sbjct: 266 ----ALADLAKAHLK 276 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 37/115 (32%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + + + S A +++ E Y G +AA R+ Sbjct: 176 DAILFFDEFIRAFEESSKYADALYWLGEC-------EFAKENY----GNSIAAYKRY--- 221 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 L + + + +L +Y L +EA + R+P A + +K Sbjct: 222 LKLEPKGDKGADVLLKLGLSYERLHAFNEAAVFFKKLLLRFPGSALADLAKAHLK 276 >gi|297569166|ref|YP_003690510.1| hypothetical protein [Desulfurivibrio alkaliphilus AHT2] gi|296925081|gb|ADH85891.1| Tetratricopeptide TPR_4 [Desulfurivibrio alkaliphilus AHT2] Length = 703 Score = 67.8 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 85/220 (38%), Gaps = 42/220 (19%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS------AGKYQ 111 +E+++ AV + +++ +A F + R+ P + A ++L +A ++ ++ Sbjct: 60 QELWQSAVGAAEREDWRRAAIDFERLHREHPTSPFAEEALWRAATLRKKIAATEPDPDWE 119 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + L + +YP+S + Y +G+++ +M R + L Y VERY + Sbjct: 120 RIRDLFRRFTVEYPDSPQAEEAYLEMGIAHFKM--------RFLREALTYFRLFVERYPD 171 Query: 172 SPYVKGAR----------FYVTVGRNQLAAKEV--------------EIGRYYLKRGEYV 207 S V AR V KE+ +G Y ++G Y Sbjct: 172 SELVPRARHWQARTLIEVARVDEAIEIF--KELTEEPELAFRLEVMTNLGLAYDQQGAYW 229 Query: 208 AAIPRFQLVLANYSDAEH--AEEAMARLVEAYVALALMDE 245 A+ FQ + + H E + L +AY + E Sbjct: 230 EALATFQELQRVAPEEYHLQNPEFLLLLGQAYFRVGREQE 269 >gi|150010168|ref|YP_001304911.1| TPR domain-containing protein [Parabacteroides distasonis ATCC 8503] gi|149938592|gb|ABR45289.1| TPR-domain containing protein [Parabacteroides distasonis ATCC 8503] Length = 999 Score = 67.8 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 29/239 (12%), Positives = 72/239 (30%), Gaps = 45/239 (18%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + + ++ ++KA + + + + + + +Y +A Sbjct: 466 NDAYFWRGESYYRQGEYNKAISDYRTYLNNTRQRNTDMYALAHYNLGYSYFKLKEYGEAL 525 Query: 115 SLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM-------------- 158 + +Y+ ++ Y +G + ++ T+ Sbjct: 526 NRFRQYVNLESNQQTPAYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQK 585 Query: 159 -------------LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 + M R++ + S YV A E GR Y+ Sbjct: 586 GFLLGLQKDYKGKISVMDRLIREFPESQYVDDAL--------------FEKGRSYVLLDN 631 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 AA F+ ++ ++ + A +A +L Y ++A + + YP A+ Sbjct: 632 NQAAAASFEQLMRDFPQSSLARKAGVQLGLIYFNDNQPEKAADAYKSVISNYPGSEEAK 690 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 95/268 (35%), Gaps = 57/268 (21%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 I +C +VG S + Y ++ + +N+S + + Sbjct: 4 ILIPLCLVVGSHMASGQRSY-----QFDAPNRLFVEGKELFSLKNYSGCIDKLEAYKQHS 58 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--- 144 A + +++ M + Y G+ A L ++Y+ YP S++ D V +L+G ++ Sbjct: 59 TDADLIQEADYMLVYSAYEQGR-PNAVELLKDYLDVYPASRHADEVNFLIGSAHFGQGEY 117 Query: 145 -----------IRDVPYDQRAT---------------KLMLQYMSRIVERYTNSPYVKGA 178 I + +Q+ + Y +RI + + Y + + Sbjct: 118 QKAIFWFNESNIDMLSPEQQEAYCFRLAYSLLQIGDMEKARGYFARIEQI--GTKYREAS 175 Query: 179 RFYVTVG-------RNQLAA----KEV---------EIGRYYLKRGEYVAAIPRFQLVLA 218 +YV N L K++ I + Y + +Y I + +LA Sbjct: 176 TYYVAYIDYATGKYNNALVEFTRLKDLPDYKERSLCYITQIYFIQNKYEKVISEGKELLA 235 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEA 246 +Y D+E+ E + AY L D+A Sbjct: 236 SYPDSENNSEVYRIMGNAYYHLGNEDQA 263 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 76/216 (35%), Gaps = 33/216 (15%) Query: 46 VYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFP----FAGVARKSLLMS 100 V L+S + Y + + F+ A E + + ++ P ++ + LL Sbjct: 532 VNLESNQQTPAYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQKGFLLGL 591 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 Y+ S+ + I ++PES+ VD + G SY + + + Sbjct: 592 ------QKDYKGKISVMDRLIREFPESQYVDDALFEKGRSYVLLDNN--------QAAAA 637 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 +++ + S + A + + Y + A ++ V++NY Sbjct: 638 SFEQLMRDFPQSSLARKAGVQLGLI--------------YFNDNQPEKAADAYKSVISNY 683 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +E A+ A+ L Y+ L ++ + + Sbjct: 684 PGSEEAKVALQDLKSVYIELNDINSFAAYANSLGGN 719 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 76/234 (32%), Gaps = 36/234 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGE 118 +++ KA + F++ + +R + Y G+Y +A S Sbjct: 431 LFQLGTQAFTNMELDKAVDLFSRAISLGAYNLESRNDAYFWRGESYYRQGEYNKAISDYR 490 Query: 119 EYITQYPESKNVD-YVY--YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SP 173 Y+ +N D Y Y +G SY ++ + L + V +N +P Sbjct: 491 TYLN-NTRQRNTDMYALAHYNLGYSYFKL--------KEYGEALNRFRQYVNLESNQQTP 541 Query: 174 YVKGARFYVTVG-------------RNQLAAKEVEIGRY--YLK------RGEYVAAIPR 212 A + + A + G Y Y K + +Y I Sbjct: 542 AYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQKGFLLGLQKDYKGKISV 601 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 ++ + ++++ ++A+ +YV L A + +PQ AR Sbjct: 602 MDRLIREFPESQYVDDALFEKGRSYVLLDNNQAAAASFEQLMRDFPQSSLARKA 655 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 49/167 (29%), Gaps = 32/167 (19%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S TD + ++Y V + + N+S A + R+ +++ + L Sbjct: 272 SSTDSPLRGDLYILGVCYYNKGNYSSAVNALGRTVREN--DALSQNAYLYLGQSYLKLKD 329 Query: 110 YQQAASLGE-----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 A E + + K Y +YA +I + + + Sbjct: 330 KNNARMAFEAAATSSFDK---QVKEA--AMY----NYALLIHETAF--TGFGESVTIFED 378 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + NS Y Y+ YL Y AA+ Sbjct: 379 FLNDFPNSKYADKVNDYLVEV--------------YLTTKNYQAALN 411 >gi|325998244|gb|ADZ50452.1| competence lipoprotein [Helicobacter pylori 2017] Length = 166 Score = 67.8 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 64/165 (38%), Gaps = 6/165 (3%) Query: 18 QLYKFALTIFFSIAVCFLV-GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 +L F + +F ++A+ + G + + + Y+ + + N A Sbjct: 2 RLKHFKIFLFIAMAMIVIGTGCANKKKKKDEYNKPAIFW-----YQGILREILFANLETA 56 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 Y++ + + + +++L +Y A+ +EYI ++ NVDY+ +L Sbjct: 57 DNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFL 116 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 S+ ++ DQ + + +E+Y NS Y + Sbjct: 117 KLQSHYYAFKNHSKDQEFISNAIVSLGEFIEKYPNSRYRPYVEYM 161 >gi|116748203|ref|YP_844890.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116697267|gb|ABK16455.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter fumaroxidans MPOB] Length = 264 Score = 67.8 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 8/126 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YEKA + + A + F +P + +A +L +S +YQ A + ++ Sbjct: 147 YEKATRAYQSGKYEVARKEFQSFLSKYPKSELADNALFTVGECYFSEKRYQDAIEVYQQV 206 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + QYP V G ++ Q+ + R+VE+Y +P + A Sbjct: 207 LDQYPRGNKVPNALLKQGTAFQQL--------GDSTAARILYERLVEKYPGTPQAQAAEK 258 Query: 181 YVTVGR 186 + R Sbjct: 259 KLKQMR 264 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 ++ + + +Y S A +G Y Y AI +Q Sbjct: 160 EVARKEFQSFLSKYPKSELADNAL--------------FTVGECYFSEKRYQDAIEVYQQ 205 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 VL Y A+ + A+ L AR + + E+YP A+ E +K Sbjct: 206 VLDQYPRGNKVPNALLKQGTAFQQLGDSTAARILYERLVEKYPGTPQAQAAEKKLK 261 Score = 38.6 bits (89), Expect = 0.90, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + G+Y A FQ L+ Y +E A+ A+ + E Y + +A EV + ++YP+G Sbjct: 154 YQSGKYEVARKEFQSFLSKYPKSELADNALFTVGECYFSEKRYQDAIEVYQQVLDQYPRG 213 Query: 261 YWARYVETLVK 271 + L+K Sbjct: 214 N--KVPNALLK 222 >gi|194333587|ref|YP_002015447.1| tol-pal system protein YbgF [Prosthecochloris aestuarii DSM 271] gi|194311405|gb|ACF45800.1| tol-pal system protein YbgF [Prosthecochloris aestuarii DSM 271] Length = 258 Score = 67.8 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 49/135 (36%), Gaps = 8/135 (5%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 R R +++ + E ++++A + F+ +P + +A + +A Y+ Sbjct: 132 PVTAGSRDDRALFDAGMNAFNEYDYAEARKEFSALLSAYPQSALADDAQYYTAETYYNEK 191 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 Y++A + I +YPE Y+ G+S+ + +++ Sbjct: 192 WYEKAILEYQLVIEKYPEGDKRPAAYFKQGLSFENI--------GDATNAGVRYKELIQL 243 Query: 169 YTNSPYVKGARFYVT 183 Y +S + Sbjct: 244 YPDSNEAGIVGPKLQ 258 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 30/105 (28%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + S ++ Y S A+ Y Y AI +QLV Sbjct: 158 EARKEFSALLSAYPQSALADDAQ--------------YYTAETYYNEKWYEKAILEYQLV 203 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + Y + + A + ++ + A + + YP Sbjct: 204 IEKYPEGDKRPAAYFKQGLSFENIGDATNAGVRYKELIQLYPDSN 248 >gi|325923405|ref|ZP_08185070.1| tol-pal system protein YbgF [Xanthomonas gardneri ATCC 19865] gi|325546120|gb|EGD17309.1| tol-pal system protein YbgF [Xanthomonas gardneri ATCC 19865] Length = 274 Score = 67.8 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 45/135 (33%), Gaps = 8/135 (5%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T +R Y A LK + A + F +P +L Y+ +Q Sbjct: 142 TASNEERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQ 201 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + + + +YP +G+S ++ Q + ++V +Y Sbjct: 202 LAEAQFRDLVGRYPTHDKAAGGLLKLGLSQYGEGKN--------DEAQQTLQQVVSQYPG 253 Query: 172 SPYVKGARFYVTVGR 186 S + A+ + R Sbjct: 254 SDAARVAQERLQSIR 268 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q +E Y N Y A +++ G Y + A +F+ + Sbjct: 165 DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 210 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + Y + A + +L + DEA++ + + +YP AR + ++ Sbjct: 211 VGRYPTHDKAAGGLLKLGLSQYGEGKNDEAQQTLQQVVSQYPGSDAARVAQERLQ 265 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 23/58 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 LK G+Y A F L Y + + A+ L E+Y A A + RYP Sbjct: 158 LKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVGRYP 215 >gi|158522219|ref|YP_001530089.1| Tol-Pal system YbgF [Desulfococcus oleovorans Hxd3] gi|158511045|gb|ABW68012.1| Tol-Pal system YbgF [Desulfococcus oleovorans Hxd3] Length = 275 Score = 67.4 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 46/128 (35%), Gaps = 8/128 (6%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +Y A ++ N+ A + F + FP + +A + + Y++A Sbjct: 156 ERLYGMARQHYEQGNYDAARKGFEELIARFPKSDLADNARFWIGESYFREKWYEKAILEY 215 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 ++ I YP V G++++ + T ++++V+++ S K Sbjct: 216 QKAIDDYPRGNKVPAALLKQGIAFSYI--------GKTTEARVVLNKLVKQFPGSSDAKI 267 Query: 178 ARFYVTVG 185 + Sbjct: 268 GEQKLAEL 275 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 14/115 (12%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 Y+Q + ++ R+ S AR IG Y + Y A Sbjct: 166 YEQGNYDAARKGFEELIARFPKSDLADNAR--------------FWIGESYFREKWYEKA 211 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 I +Q + +Y A+ + A+ + EAR V++ + +++P A+ Sbjct: 212 ILEYQKAIDDYPRGNKVPAALLKQGIAFSYIGKTTEARVVLNKLVKQFPGSSDAK 266 >gi|77918025|ref|YP_355840.1| hypothetical protein Pcar_0410 [Pelobacter carbinolicus DSM 2380] gi|77544108|gb|ABA87670.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380] Length = 222 Score = 67.4 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 14/105 (13%) Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 ++ + + Y A+F++ Y G+Y A+ FQ V+ NY Sbjct: 128 FESFLDHFPANNYAGNAQFWLGEC--------------YYNLGQYDRAVQEFQKVVDNYP 173 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 + A EA+ R+ A L ++AR+ + +Q+RYP AR Sbjct: 174 LSGKAPEALLRMAPALRQLNQYEKARQALQALQQRYPNSAAARKA 218 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 8/123 (6%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++Y KA + + + F FP A + Y+ G+Y +A Sbjct: 104 SATKIYLKAFGDYASGRYHQGIKGFESFLDHFPANNYAGNAQFWLGECYYNLGQYDRAVQ 163 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 ++ + YP S + + Q+ + + Q + + +RY NS Sbjct: 164 EFQKVVDNYPLSGKAPEALLRMAPALRQLNQ--------YEKARQALQALQQRYPNSAAA 215 Query: 176 KGA 178 + A Sbjct: 216 RKA 218 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 44/130 (33%), Gaps = 22/130 (16%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 AF Y++G+Y Q E ++ +P + + +G Y + +Q Sbjct: 112 AFGDYASGRYHQGIKGFESFLDHFPANNYAGNAQFWLGECYYNL--------GQYDRAVQ 163 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 ++V+ Y S A + QL +Y A Q + Y Sbjct: 164 EFQKVVDNYPLSGKAPEALLRMAPALRQL--------------NQYEKARQALQALQQRY 209 Query: 221 SDAEHAEEAM 230 ++ A +AM Sbjct: 210 PNSAAARKAM 219 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 22/55 (40%) Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 G Y I F+ L ++ +A A L E Y L D A + + + YP Sbjct: 119 GRYHQGIKGFESFLDHFPANNYAGNAQFWLGECYYNLGQYDRAVQEFQKVVDNYP 173 >gi|256838989|ref|ZP_05544499.1| TPR-domain-containing protein [Parabacteroides sp. D13] gi|298374536|ref|ZP_06984494.1| TPR-domain containing protein [Bacteroides sp. 3_1_19] gi|256739908|gb|EEU53232.1| TPR-domain-containing protein [Parabacteroides sp. D13] gi|298268904|gb|EFI10559.1| TPR-domain containing protein [Bacteroides sp. 3_1_19] Length = 999 Score = 67.4 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 29/239 (12%), Positives = 72/239 (30%), Gaps = 45/239 (18%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + + ++ ++KA + + + + + + +Y +A Sbjct: 466 NDAYFWRGESYYRQGEYNKAISDYRTYLNNTRQRNTDMYALAHYNLGYSYFKLKEYGEAL 525 Query: 115 SLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM-------------- 158 + +Y+ ++ Y +G + ++ T+ Sbjct: 526 NRFRQYVNLESNQQTPAYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQK 585 Query: 159 -------------LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 + M R++ + S YV A E GR Y+ Sbjct: 586 GFLLGLQKDYKGKISVMDRLIREFPESQYVDDAL--------------FEKGRSYVLLDN 631 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 AA F+ ++ ++ + A +A +L Y ++A + + YP A+ Sbjct: 632 NQAAAASFEQLMRDFPQSSLARKAGVQLGLIYFNDNQPEKAADAYKSVISNYPGSEEAK 690 Score = 62.4 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 94/268 (35%), Gaps = 57/268 (21%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 I +C +VG S + Y ++ + +N+S + + Sbjct: 4 ILIPLCLVVGSHMASGQRSY-----QFDAPNRLFVEGKELFSLKNYSGCIDKLEAYKQHS 58 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--- 144 A + +++ M + Y G+ A L ++Y+ YP S++ D V +L+G ++ Sbjct: 59 TDADLIQEADYMLVYSAYEQGR-PNAVELLKDYLDVYPASRHADEVNFLIGSAHFGQGEY 117 Query: 145 -----------IRDVPYDQRAT---------------KLMLQYMSRIVERYTNSPYVKGA 178 I + +Q+ + Y +RI + + Y + + Sbjct: 118 QKAIFWFNESNIDMLSPEQQEAYCFRLAYSLLQIGDMEKARGYFARIEQI--GTKYREAS 175 Query: 179 RFYVTVG-------RNQLAA----------KE---VEIGRYYLKRGEYVAAIPRFQLVLA 218 +YV N L KE I + Y + +Y I + +LA Sbjct: 176 TYYVAYIDYATGKYNNALVEFTRLKDLPDYKERSLYYITQIYFIQNKYEKVISEGKELLA 235 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEA 246 +Y D+E+ E + AY L D+A Sbjct: 236 SYPDSENNSEVYRIMGNAYYHLGNEDQA 263 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 76/216 (35%), Gaps = 33/216 (15%) Query: 46 VYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFP----FAGVARKSLLMS 100 V L+S + Y + + F+ A E + + ++ P ++ + LL Sbjct: 532 VNLESNQQTPAYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQKGFLLGL 591 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 Y+ S+ + I ++PES+ VD + G SY + + + Sbjct: 592 ------QKDYKGKISVMDRLIREFPESQYVDDALFEKGRSYVLLDNN--------QAAAA 637 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 +++ + S + A + + Y + A ++ V++NY Sbjct: 638 SFEQLMRDFPQSSLARKAGVQLGLI--------------YFNDNQPEKAADAYKSVISNY 683 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +E A+ A+ L Y+ L ++ + + Sbjct: 684 PGSEEAKVALQDLKSVYIELNDINSFAAYANSLGGN 719 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 76/234 (32%), Gaps = 36/234 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGE 118 +++ KA + F++ + +R + Y G+Y +A S Sbjct: 431 LFQLGTQAFTNMELDKAVDLFSRAISLGAYNLESRNDAYFWRGESYYRQGEYNKAISDYR 490 Query: 119 EYITQYPESKNVD-YVY--YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SP 173 Y+ +N D Y Y +G SY ++ + L + V +N +P Sbjct: 491 TYLN-NTRQRNTDMYALAHYNLGYSYFKL--------KEYGEALNRFRQYVNLESNQQTP 541 Query: 174 YVKGARFYVTVG-------------RNQLAAKEVEIGRY--YLK------RGEYVAAIPR 212 A + + A + G Y Y K + +Y I Sbjct: 542 AYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQKGFLLGLQKDYKGKISV 601 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 ++ + ++++ ++A+ +YV L A + +PQ AR Sbjct: 602 MDRLIREFPESQYVDDALFEKGRSYVLLDNNQAAAASFEQLMRDFPQSSLARKA 655 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 49/167 (29%), Gaps = 32/167 (19%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S TD + ++Y V + + N+S A + R+ +++ + L Sbjct: 272 SSTDSPLRGDLYILGVCYYNKGNYSSAVNALGRTVREN--DALSQNAYLYLGQSYLKLKD 329 Query: 110 YQQAASLGE-----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 A E + + K Y +YA +I + + + Sbjct: 330 KNNARMAFEAAATSSFDK---QVKEA--AMY----NYALLIHETAF--TGFGESVTIFED 378 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + NS Y Y+ YL Y AA+ Sbjct: 379 FLNDFPNSKYADKVNDYLVEV--------------YLTTKNYQAALN 411 >gi|294661410|ref|YP_003573286.1| hypothetical protein Aasi_1962 [Candidatus Amoebophilus asiaticus 5a2] gi|227336561|gb|ACP21158.1| hypothetical protein Aasi_1962 [Candidatus Amoebophilus asiaticus 5a2] Length = 1031 Score = 67.4 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 68/220 (30%), Gaps = 31/220 (14%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D Y+KA+++ F +A + P K+L A++ + Sbjct: 575 KTEDNYPAHNRYQKALIYGLLGKFVEAKQNLESIINTCPHTAYYEKALFEYAYLALQHQE 634 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y A +I + P S V ++ + + + +++ Y Sbjct: 635 YDLAIKSFTNFIQKKPYSTLVPDALLHRAVAKVNL--------KQYAEAGKDYETLLKDY 686 Query: 170 TNSPYVKGARFYVTVGR-----------------------NQLAAKEVEIGRYYLKRGEY 206 P + A + LAA E + Y Sbjct: 687 PTHPNAQSALLELPNLVVQEGKPEKLQQYLASYKAANPSSETLAAISFEAAKNLFYSQNY 746 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 A+ + + + +Y ++ +EA + EAY LA ++A Sbjct: 747 TPAVQQLKEFITSYPNSTLIDEANFLIAEAYYRLAEDEQA 786 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 62/213 (29%), Gaps = 30/213 (14%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQY 105 D YQ +Y + + + A F Q L+ +A Y Sbjct: 502 DKKNTNYYQDALYGLGYVLFNTEKYKAALPLFLQYINIPNITNDNNWRLDVLVRTADCYY 561 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + Y +A L + YP Y + Y + + V Q + I Sbjct: 562 AIKDYHKALDLYTKTEDNYPAHNR-----YQKALIYGLLGKFV--------EAKQNLESI 608 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 + ++ Y + A F L+ EY AI F + + Sbjct: 609 INTCPHTAYYEKALFEYAYLA--------------LQHQEYDLAIKSFTNFIQKKPYSTL 654 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 +A+ A V L EA + + + YP Sbjct: 655 VPDALLHRAVAKVNLKQYAEAGKDYETLLKDYP 687 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 85/218 (38%), Gaps = 28/218 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +E A QN++ A + + +P + + ++ + A Y + +QA Sbjct: 734 FEAAKNLFYSQNYTPAVQQLKEFITSYPNSTLIDEANFLIAEAYYRLAEDEQAL------ 787 Query: 121 ITQYPESKNVDYVYYLV-----------------GMSYAQMIRDVPYDQRATKLMLQYMS 163 I + SKN +Y +++ + +++ +++ T L+ + Sbjct: 788 IQYHITSKNKQTPFYNRILLRIASLAYKHKDFNTALTHYKQLKESASNKKETYYALEGIM 847 Query: 164 RIVERYTNSPYVKGARFYVT----VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 + + V A + + N ++ + +G+ LK+ +Y A F+ ++ N Sbjct: 848 KTSDALQQYEEVNKAASQIINQGNITINAVSQAALYLGKTALKQAKYQEAHEHFKQIVKN 907 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 D +A EA + Y L ++ E + ++ +++ Sbjct: 908 GQDM-YAAEAQYLIAYTYYQLREFKQSLEALFILNKQF 944 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 68/209 (32%), Gaps = 14/209 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + + + F A Y P L++A + Y A E Y Sbjct: 218 YMIMEVLYQAKRFQAAINYIKDVQTKQPTLKNYEDIELLTAESYFFLKDYASATRHYENY 277 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ--YMSRIVERYTNSPYVKGA 178 I P S+ V+Y + S + + + +L LQ Y++++ Y Y+K + Sbjct: 278 IHLQP-SEVTHEVFYRLAYSLYKSGENYKALKYLKELALQDDYLAQLASYYMGLIYIKTS 336 Query: 179 RF-----------YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 + + + + + G+ +I Q +Y ++ H Sbjct: 337 QKNLALAAFDQARQMNFINEIQTEASFQYAQLSYELGKLTISIDALQKFKRSYPNSPHIT 396 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQER 256 L + Y D A + +QE+ Sbjct: 397 TVDQLLSQVYFHTNHYDLAIAHIESLQEK 425 >gi|238756014|ref|ZP_04617338.1| hypothetical protein yruck0001_31450 [Yersinia ruckeri ATCC 29473] gi|238705739|gb|EEP98132.1| hypothetical protein yruck0001_31450 [Yersinia ruckeri ATCC 29473] Length = 259 Score = 67.4 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 49/137 (35%), Gaps = 9/137 (6%) Query: 50 SVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + + Y AV L+++ + +A F + +P + + + Y+ G Sbjct: 131 APASTGDENSDYNAAVSLALEKKQYDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKG 190 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 K AA + YP+S Y VG+ + + +++++ Sbjct: 191 KKDDAAYYYAVVVKNYPKSPKSADAMYKVGVIMQEKGQG--------DKAKAVYQQVIKQ 242 Query: 169 YTNSPYVKGARFYVTVG 185 Y N+ K A+ ++ Sbjct: 243 YPNTETAKQAQKRLSAL 259 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 49/129 (37%), Gaps = 14/129 (10%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S + +++ + V++Y S Y A +++ G+ Sbjct: 140 SDYNAAVSLALEKKQYDQAITAFQGFVKQYPKSTYQPNANYWL--------------GQL 185 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y +G+ A + +V+ NY + + +AM ++ D+A+ V + ++YP Sbjct: 186 YYNKGKKDDAAYYYAVVVKNYPKSPKSADAMYKVGVIMQEKGQGDKAKAVYQQVIKQYPN 245 Query: 260 GYWARYVET 268 A+ + Sbjct: 246 TETAKQAQK 254 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 22/126 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y QA + + ++ QYP+S Y +G Y + Y + +V+ Sbjct: 153 KQYDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKGKKDD--------AAYYYAVVVK 204 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SP A + V V ++G+ A +Q V+ Y + E A+ Sbjct: 205 NYPKSPKSADAMYKVGVIMQ--------------EKGQGDKAKAVYQQVIKQYPNTETAK 250 Query: 228 EAMARL 233 +A RL Sbjct: 251 QAQKRL 256 >gi|301308217|ref|ZP_07214171.1| TPR-domain containing protein [Bacteroides sp. 20_3] gi|300833687|gb|EFK64303.1| TPR-domain containing protein [Bacteroides sp. 20_3] Length = 999 Score = 67.4 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 29/239 (12%), Positives = 72/239 (30%), Gaps = 45/239 (18%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + + ++ ++KA + + + + + + +Y +A Sbjct: 466 NDAYFWRGESYYRQGEYNKAISDYRTYLNNTRQRNTDMYALAHYNLGYSYFKLKEYGEAL 525 Query: 115 SLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM-------------- 158 + +Y+ ++ Y +G + ++ T+ Sbjct: 526 NRFRQYVNLESNQQTPAYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQK 585 Query: 159 -------------LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 + M R++ + S YV A E GR Y+ Sbjct: 586 GFLLGLQKDYKGKISVMDRLIREFPESQYVDDAL--------------FEKGRSYVLLDN 631 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 AA F+ ++ ++ + A +A +L Y ++A + + YP A+ Sbjct: 632 NQAAAASFEQLMRDFPQSSLARKAGVQLGLIYFNDNQPEKAADAYKSVISNYPGSEEAK 690 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 94/268 (35%), Gaps = 57/268 (21%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 I +C +VG S + Y ++ + +N+S + + Sbjct: 4 ILIPLCLVVGSHMASGQRSY-----QFDAPNRLFVEGKELFSLKNYSGCIDKLEAYKQHS 58 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----- 142 A + +++ M + Y G+ A L ++Y+ YP S++ D V +L+G ++ Sbjct: 59 TDADLIQEADYMLVYSAYEQGRL-NAVELLKDYLDVYPASRHADEVNFLIGSAHFGLGEY 117 Query: 143 ---------QMIRDVPYDQRAT---------------KLMLQYMSRIVERYTNSPYVKGA 178 I + +Q+ + Y +RI + + Y + + Sbjct: 118 QKAIFWFNESNIDMLSPEQQEAYCFRLAYSLLQTGDMEKARGYFARIEQI--GTKYREAS 175 Query: 179 RFYVTVG-------RNQLAA----------KE---VEIGRYYLKRGEYVAAIPRFQLVLA 218 +YV N L KE I + Y + +Y I + +LA Sbjct: 176 TYYVAYIDYATGKYNNALVEFTRLKDLSDYKERSLYYITQIYFIQNKYEKVISEGKELLA 235 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEA 246 +Y D+E+ E + AY L D+A Sbjct: 236 SYPDSENNSEVYRIMGNAYYHLGNEDQA 263 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 76/216 (35%), Gaps = 33/216 (15%) Query: 46 VYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFP----FAGVARKSLLMS 100 V L+S + Y + + F+ A E + + ++ P ++ + LL Sbjct: 532 VNLESNQQTPAYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQKGFLLGL 591 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 Y+ S+ + I ++PES+ VD + G SY + + + Sbjct: 592 ------QKDYKGKISVMDRLIREFPESQYVDDALFEKGRSYVLLDNN--------QAAAA 637 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 +++ + S + A + + Y + A ++ V++NY Sbjct: 638 SFEQLMRDFPQSSLARKAGVQLGLI--------------YFNDNQPEKAADAYKSVISNY 683 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +E A+ A+ L Y+ L ++ + + Sbjct: 684 PGSEEAKVALQDLKSVYIELNDINSFAAYANSLGGN 719 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 76/234 (32%), Gaps = 36/234 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGE 118 +++ KA + F++ + +R + Y G+Y +A S Sbjct: 431 LFQLGTQAFTNMELDKAVDLFSRAISLGAYNLESRNDAYFWRGESYYRQGEYNKAISDYR 490 Query: 119 EYITQYPESKNVD-YVY--YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SP 173 Y+ +N D Y Y +G SY ++ + L + V +N +P Sbjct: 491 TYLN-NTRQRNTDMYALAHYNLGYSYFKL--------KEYGEALNRFRQYVNLESNQQTP 541 Query: 174 YVKGARFYVTVG-------------RNQLAAKEVEIGRY--YLK------RGEYVAAIPR 212 A + + A + G Y Y K + +Y I Sbjct: 542 AYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQKGFLLGLQKDYKGKISV 601 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 ++ + ++++ ++A+ +YV L A + +PQ AR Sbjct: 602 MDRLIREFPESQYVDDALFEKGRSYVLLDNNQAAAASFEQLMRDFPQSSLARKA 655 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 49/167 (29%), Gaps = 32/167 (19%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S TD + ++Y V + + N+S A + R+ +++ + L Sbjct: 272 SSTDSPLRGDLYILGVCYYNKGNYSSAVNALGRTVREN--DALSQNAYLYLGQSYLKLKD 329 Query: 110 YQQAASLGE-----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 A E + + K Y +YA +I + + + Sbjct: 330 KNNARMAFEAAATSSFDK---QVKEA--AMY----NYALLIHETAF--TGFGESVTIFED 378 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + NS Y Y+ YL Y AA+ Sbjct: 379 FLNDFPNSKYADKVNDYLVEV--------------YLTTKNYQAALN 411 >gi|284052491|ref|ZP_06382701.1| TPR repeat-containing serine/threonin protein kinase [Arthrospira platensis str. Paraca] Length = 755 Score = 67.4 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 69/206 (33%), Gaps = 32/206 (15%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L IA LVG L+ V+ + + ++ V L+ + A + FN+ Sbjct: 334 LWTVVGIAATGLVGLMVIFGLFQVLNRPDPVKSEAAL-KRGVERLESGDPEAAIKAFNRS 392 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + FP A + A Y KY+QA + + I P + ++ Y+ ++Y Q Sbjct: 393 IQLFPDNSEAFR---KRANAYYDLQKYEQAIADYTQAIKLDPTNPDI---YFNRSLAYHQ 446 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 M + +++++ + LA + Sbjct: 447 M--------GDFGNAINDLNQVIRLNPEDTDA--------FYQRGLAHY---------TQ 481 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEA 229 Y AAI + V+ D A A Sbjct: 482 ENYEAAILDYTEVIRRQPDHSEAYRA 507 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 58/181 (32%), Gaps = 33/181 (18%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y++ + ++N+ A + + R P A ++ AG Q + E Sbjct: 472 YQRGLAHYTQENYEAAILDYTEVIRRQPDHSEAYRAR---GSAHVKAGNLQAGMADYTEA 528 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I P+S YY G + + + L ++++ ++ A Sbjct: 529 IRLNPQSAA---AYYNRGRARFHL--------GDYQGALADYNQVISWEPDN-----AEA 572 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARL-VEAYV 238 Y Y+ G Y AAI + A ++ +A L V+ Y Sbjct: 573 YGNRCST------------YINLGNYEAAIESCSRSIQLNPTAMDYNNRCIAYLNVQNYD 620 Query: 239 A 239 A Sbjct: 621 A 621 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 24/87 (27%), Gaps = 19/87 (21%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ------Y- 105 + + Y + ++ A +NQ P +A Y Sbjct: 532 NPQSAAAYYNRGRARFHLGDYQGALADYNQVISWEP----------DNAEAYGNRCSTYI 581 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDY 132 + G Y+ A I P +DY Sbjct: 582 NLGNYEAAIESCSRSIQLNPT--AMDY 606 >gi|22126929|ref|NP_670352.1| tol-pal system protein YbgF [Yersinia pestis KIM 10] gi|45440864|ref|NP_992403.1| tol-pal system protein YbgF [Yersinia pestis biovar Microtus str. 91001] gi|51595505|ref|YP_069696.1| tol-pal system protein YbgF [Yersinia pseudotuberculosis IP 32953] gi|108806601|ref|YP_650517.1| tol-pal system protein YbgF [Yersinia pestis Antiqua] gi|108813032|ref|YP_648799.1| tol-pal system protein YbgF [Yersinia pestis Nepal516] gi|145599835|ref|YP_001163911.1| tol-pal system protein YbgF [Yersinia pestis Pestoides F] gi|153950529|ref|YP_001401829.1| tol-pal system protein YbgF [Yersinia pseudotuberculosis IP 31758] gi|162419419|ref|YP_001605924.1| tol-pal system protein YbgF [Yersinia pestis Angola] gi|166211659|ref|ZP_02237694.1| tol-pal system protein YbgF [Yersinia pestis biovar Antiqua str. B42003004] gi|167399977|ref|ZP_02305495.1| tol-pal system protein YbgF [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167424105|ref|ZP_02315858.1| tol-pal system protein YbgF [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170025176|ref|YP_001721681.1| tol-pal system protein YbgF [Yersinia pseudotuberculosis YPIII] gi|186894558|ref|YP_001871670.1| tol-pal system protein YbgF [Yersinia pseudotuberculosis PB1/+] gi|229894004|ref|ZP_04509190.1| SecB-dependent secretory protein [Yersinia pestis Pestoides A] gi|229903472|ref|ZP_04518585.1| SecB-dependent secretory protein [Yersinia pestis Nepal516] gi|270487252|ref|ZP_06204326.1| tol-pal system protein YbgF [Yersinia pestis KIM D27] gi|21959968|gb|AAM86603.1|AE013906_7 hypothetical protein y3053 [Yersinia pestis KIM 10] gi|45435722|gb|AAS61280.1| conserved hypothetical protein [Yersinia pestis biovar Microtus str. 91001] gi|51588787|emb|CAH20401.1| conserved putative exported protein [Yersinia pseudotuberculosis IP 32953] gi|108776680|gb|ABG19199.1| hypothetical protein YPN_2872 [Yersinia pestis Nepal516] gi|108778514|gb|ABG12572.1| hypothetical protein YPA_0604 [Yersinia pestis Antiqua] gi|145211531|gb|ABP40938.1| hypothetical protein YPDSF_2570 [Yersinia pestis Pestoides F] gi|152962024|gb|ABS49485.1| tol-pal system protein YbgF [Yersinia pseudotuberculosis IP 31758] gi|162352234|gb|ABX86182.1| tol-pal system protein YbgF [Yersinia pestis Angola] gi|166207430|gb|EDR51910.1| tol-pal system protein YbgF [Yersinia pestis biovar Antiqua str. B42003004] gi|167050685|gb|EDR62093.1| tol-pal system protein YbgF [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056954|gb|EDR66717.1| tol-pal system protein YbgF [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751710|gb|ACA69228.1| tol-pal system protein YbgF [Yersinia pseudotuberculosis YPIII] gi|186697584|gb|ACC88213.1| tol-pal system protein YbgF [Yersinia pseudotuberculosis PB1/+] gi|229679242|gb|EEO75345.1| SecB-dependent secretory protein [Yersinia pestis Nepal516] gi|229703889|gb|EEO90902.1| SecB-dependent secretory protein [Yersinia pestis Pestoides A] gi|270335756|gb|EFA46533.1| tol-pal system protein YbgF [Yersinia pestis KIM D27] gi|320014266|gb|ADV97837.1| SecB-dependent secretory protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 269 Score = 67.4 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 52/156 (33%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPF 89 G + + Y AV L+++ + +A F + +P Sbjct: 122 TAAGSSGNADAGAAASTAAPAASTGDENSDYNVAVSLALEKKQYDQAITAFQSFVKQYPK 181 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 182 STYQPNANYWLGQLYYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGV--------IM 233 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ + +++++Y N+ K A+ ++ Sbjct: 234 QDKGQSDKAKAVYQQVIKQYPNTDAAKQAQKRLSAL 269 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 50/129 (38%), Gaps = 14/129 (10%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S + + +++ + V++Y S Y A +++ G+ Sbjct: 150 SDYNVAVSLALEKKQYDQAITAFQSFVKQYPKSTYQPNANYWL--------------GQL 195 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y +G+ A + +V+ NY + + EAM ++ D+A+ V + ++YP Sbjct: 196 YYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPN 255 Query: 260 GYWARYVET 268 A+ + Sbjct: 256 TDAAKQAQK 264 >gi|224369817|ref|YP_002603981.1| TPR domain family protein [Desulfobacterium autotrophicum HRM2] gi|223692534|gb|ACN15817.1| TPR domain family protein [Desulfobacterium autotrophicum HRM2] Length = 231 Score = 67.4 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 8/125 (6%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y A + E+NF +A F + +P + +A +L YS G +Q+A + ++ Sbjct: 113 LYNSARSLVLEENFHEAARLFREFLTRYPNSELADNALYWLGECHYSLGNFQEAINTFKD 172 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +T YP+ V +Y + Y+ +V Y +P + A Sbjct: 173 VVTLYPKGGKVPDALLKTAYAYLSLDD--------ADRAHHYLKLVVRGYPFTPAGEKAE 224 Query: 180 FYVTV 184 + Sbjct: 225 QKLKA 229 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 36/106 (33%), Gaps = 14/106 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + + RY NS A +++ L G + AI Sbjct: 124 ENFHEAARLFREFLTRYPNSELADNALYWLGECHYSL--------------GNFQEAINT 169 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 F+ V+ Y +A+ + AY++L D A + L+ YP Sbjct: 170 FKDVVTLYPKGGKVPDALLKTAYAYLSLDDADRAHHYLKLVVRGYP 215 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 46/147 (31%), Gaps = 23/147 (15%) Query: 84 SRDFPFAGVARKSLL-MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 ++ P LL SA + +AA L E++T+YP S+ D Y +G + Sbjct: 99 QKNNPHPVYGEPILLYNSARSLVLEENFHEAARLFREFLTRYPNSELADNALYWLGECHY 158 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + + + +V Y V A YL Sbjct: 159 SL--------GNFQEAINTFKDVVTLYPKGGKVPDALLKTAYA--------------YLS 196 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEA 229 + A +LV+ Y E+A Sbjct: 197 LDDADRAHHYLKLVVRGYPFTPAGEKA 223 Score = 42.0 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 23/75 (30%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +Y NF +A F +P G +LL +A+ S Sbjct: 141 PNSELADNALYWLGECHYSLGNFQEAINTFKDVVTLYPKGGKVPDALLKTAYAYLSLDDA 200 Query: 111 QQAASLGEEYITQYP 125 +A + + YP Sbjct: 201 DRAHHYLKLVVRGYP 215 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + A F+ L Y ++E A+ A+ L E + +L EA + YP+G Sbjct: 124 ENFHEAARLFREFLTRYPNSELADNALYWLGECHYSLGNFQEAINTFKDVVTLYPKGG-- 181 Query: 264 RYVETLVK 271 + + L+K Sbjct: 182 KVPDALLK 189 >gi|82703825|ref|YP_413391.1| hypothetical protein Nmul_A2712 [Nitrosospira multiformis ATCC 25196] gi|82411890|gb|ABB75999.1| conserved hypothetical protein [Nitrosospira multiformis ATCC 25196] Length = 304 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 8/126 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE K + +A FN R +P + A + Y+ +++ A + E Sbjct: 187 YENGYDLFKTGKYKEAISSFNSFLRSYPESSFAASAHYWIGNSFYALREFKNAVAAQETL 246 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I YP+S V + S ++ + + ++ +Y S A+ Sbjct: 247 IKIYPDSPKVPDAMLNIASSQLELNKK--------DAARTILESVIVKYPGSDAADKAKR 298 Query: 181 YVTVGR 186 +T + Sbjct: 299 RLTSIK 304 Score = 55.5 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 41/113 (36%), Gaps = 14/113 (12%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 K + + + Y S + A +++ +Y R + A+ + Sbjct: 200 KEAISSFNSFLRSYPESSFAASAHYWIGN-------------SFYALRE-FKNAVAAQET 245 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 ++ Y D+ +AM + + + L D AR ++ + +YP A + Sbjct: 246 LIKIYPDSPKVPDAMLNIASSQLELNKKDAARTILESVIVKYPGSDAADKAKR 298 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 24/61 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 K G+Y AI F L +Y ++ A A + ++ AL A + + YP Sbjct: 194 FKTGKYKEAISSFNSFLRSYPESSFAASAHYWIGNSFYALREFKNAVAAQETLIKIYPDS 253 Query: 261 Y 261 Sbjct: 254 P 254 >gi|148262284|ref|YP_001228990.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4] gi|146395784|gb|ABQ24417.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens Rf4] Length = 275 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 8/133 (6%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + +Y++ + LK + KA EYF + FP + + Y KY QA Sbjct: 151 EQAPDALYQRGLDTLKGGDPQKAREYFTKFIELFPKHELTANARYWLGETYYHEKKYDQA 210 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 +E I YP + V M++ ++ K +++E + Sbjct: 211 ILEFQEVIKNYPGKEKVPAAMLKQAMAFKEL--------GDAKSARYVYKKLIEDSPYTD 262 Query: 174 YVKGARFYVTVGR 186 + A+ + + Sbjct: 263 EARIAKEKLKELK 275 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 48/144 (33%), Gaps = 22/144 (15%) Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 + Y G+ + + +Y ++ +E + AR+++ Sbjct: 151 EQAPDALYQRGLDTLKG--------GDPQKAREYFTKFIELFPKHELTANARYWL----- 197 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 G Y +Y AI FQ V+ NY E AM + A+ L AR Sbjct: 198 ---------GETYYHEKKYDQAILEFQEVIKNYPGKEKVPAAMLKQAMAFKELGDAKSAR 248 Query: 248 EVVSLIQERYPQGYWARYVETLVK 271 V + E P AR + +K Sbjct: 249 YVYKKLIEDSPYTDEARIAKEKLK 272 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 27/83 (32%), Gaps = 3/83 (3%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 Y + E+ + +A F + +++P ++L A G Sbjct: 185 PKHELTANARYWLGETYYHEKKYDQAILEFQEVIKNYPGKEKVPAAMLKQAMAFKELGDA 244 Query: 111 QQAASLGEEYITQYPESKNVDYV 133 + A + ++ I +S D Sbjct: 245 KSARYVYKKLIE---DSPYTDEA 264 >gi|46580339|ref|YP_011147.1| TPR domain-containing protein [Desulfovibrio vulgaris str. Hildenborough] gi|120602284|ref|YP_966684.1| TPR repeat-containing protein [Desulfovibrio vulgaris DP4] gi|46449756|gb|AAS96406.1| TPR domain protein [Desulfovibrio vulgaris str. Hildenborough] gi|120562513|gb|ABM28257.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris DP4] gi|311233682|gb|ADP86536.1| tol-pal system protein YbgF [Desulfovibrio vulgaris RCH1] Length = 312 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 50/124 (40%), Gaps = 8/124 (6%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y+ + +N+ A + F + FP + + + + AA E+ Sbjct: 194 LYDTGISSFNSRNYKDALKSFKDFTDTFPNHKLTSNAWFWQGETNFQMNNFPAAALAYEQ 253 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I+++P+S + G+ + + + D + + +++++ +SP K A+ Sbjct: 254 VISKFPKSSKLPSALLKQGICFYKTGK---KDAGKIR-----LEELIKKHPDSPEAKRAQ 305 Query: 180 FYVT 183 Y+ Sbjct: 306 QYIK 309 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 43/138 (31%), Gaps = 22/138 (15%) Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Y G+S R K L+ + + N A F+ Sbjct: 194 LYDTGISSFNS--------RNYKDALKSFKDFTDTFPNHKLTSNAWFWQ----------- 234 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 G + + AA ++ V++ + + A+ + + D + + + Sbjct: 235 ---GETNFQMNNFPAAALAYEQVISKFPKSSKLPSALLKQGICFYKTGKKDAGKIRLEEL 291 Query: 254 QERYPQGYWARYVETLVK 271 +++P A+ + +K Sbjct: 292 IKKHPDSPEAKRAQQYIK 309 >gi|206585491|gb|ACI15551.1| serine/threonine protein kinase [Arthrospira platensis S6] Length = 732 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 69/206 (33%), Gaps = 32/206 (15%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L IA LVG L+ V+ + + ++ V L+ + A + FN+ Sbjct: 311 LWTVVGIAATGLVGLMVIFGLFQVLNRPDPVKSEAAL-KRGVERLESGDPEAAIKAFNRS 369 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + FP A + A Y KY+QA + + I P + ++ Y+ ++Y Q Sbjct: 370 IQLFPDNSEAFR---KRANAYYDLQKYEQAIADYTQAIKLDPTNPDI---YFNRSLAYHQ 423 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 M + +++++ + LA + Sbjct: 424 M--------GDFGNAINDLNQVIRLNPEDTDA--------FYQRGLAHY---------TQ 458 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEA 229 Y AAI + V+ D A A Sbjct: 459 ENYEAAILDYTEVIRRQPDHSEAYRA 484 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 58/181 (32%), Gaps = 33/181 (18%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y++ + ++N+ A + + R P A ++ AG Q + E Sbjct: 449 YQRGLAHYTQENYEAAILDYTEVIRRQPDHSEAYRAR---GSAHVKAGNLQAGMADYTEA 505 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I P+S YY G + + + L ++++ ++ A Sbjct: 506 IRLNPQSAA---AYYNRGRARFHL--------GDYQGALADYNQVISWEPDN-----AEA 549 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARL-VEAYV 238 Y Y+ G Y AAI + A ++ +A L V+ Y Sbjct: 550 YGNRCST------------YINLGNYEAAIESCSRSIQLNPTAMDYNNRCIAYLNVQNYD 597 Query: 239 A 239 A Sbjct: 598 A 598 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 24/87 (27%), Gaps = 19/87 (21%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ------Y- 105 + + Y + ++ A +NQ P +A Y Sbjct: 509 NPQSAAAYYNRGRARFHLGDYQGALADYNQVISWEP----------DNAEAYGNRCSTYI 558 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDY 132 + G Y+ A I P +DY Sbjct: 559 NLGNYEAAIESCSRSIQLNPT--AMDY 583 >gi|253702174|ref|YP_003023363.1| tol-pal system protein YbgF [Geobacter sp. M21] gi|251777024|gb|ACT19605.1| tol-pal system protein YbgF [Geobacter sp. M21] Length = 283 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 8/146 (5%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 + + + + + +Y+K +KE N KA E F+ P +A Sbjct: 142 MAKMEKGVEEQAKKAAQLQQAPDYLYQKGYEAMKEGNLPKARELFSSFLEHHPKHNLAAN 201 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + YS K++ A E I YP+ GM++ + T Sbjct: 202 AQYWIGESYYSEKKFEDAVLEFENVIKNYPDKDKAPAAMLKQGMAF--------RELGDT 253 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFY 181 K + R+VE + S K AR Sbjct: 254 KSANYILKRLVEEHPKSEEAKIAREK 279 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 23/136 (16%) Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 DY Y G + +++ + S +E + A+++ Sbjct: 164 DY-LYQKG---YEAMKEGNLP-----KARELFSSFLEHHPKHNLAANAQYW--------- 205 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 IG Y ++ A+ F+ V+ NY D + A AM + A+ L A ++ Sbjct: 206 -----IGESYYSEKKFEDAVLEFENVIKNYPDKDKAPAAMLKQGMAFRELGDTKSANYIL 260 Query: 251 SLIQERYPQGYWARYV 266 + E +P+ A+ Sbjct: 261 KRLVEEHPKSEEAKIA 276 >gi|237751395|ref|ZP_04581875.1| competence lipoprotein [Helicobacter bilis ATCC 43879] gi|229372761|gb|EEO23152.1| competence lipoprotein [Helicobacter bilis ATCC 43879] Length = 210 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 63/169 (37%), Gaps = 9/169 (5%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 ++V + YE ++ N A +F+ + + + +++L Sbjct: 14 CSNKDKEVVYNQPASFW-----YEGIFKNIRLGNLETADSHFSSLQSEHLNSPLIPEAML 68 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 S +Y + +EY+ +Y + N DY+ +L S+ ++ DQ+ Sbjct: 69 ALGQAHLSNEEYILSDFYFKEYLKRYGNANNADYISFLRLKSHLYAFKNASKDQQFMTDS 128 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IGRYYLKRGE 205 + + +E+Y NS Y+ + L E+ I R Y K + Sbjct: 129 IILIQEFMEKYPNSRYMPFVHEM--EVKFVLGQNELNKAIARVYEKNDQ 175 >gi|149366874|ref|ZP_01888908.1| putative exported protein [Yersinia pestis CA88-4125] gi|165924608|ref|ZP_02220440.1| tol-pal system protein YbgF [Yersinia pestis biovar Orientalis str. F1991016] gi|165938319|ref|ZP_02226877.1| tol-pal system protein YbgF [Yersinia pestis biovar Orientalis str. IP275] gi|166011572|ref|ZP_02232470.1| tol-pal system protein YbgF [Yersinia pestis biovar Antiqua str. E1979001] gi|167419821|ref|ZP_02311574.1| tol-pal system protein YbgF [Yersinia pestis biovar Orientalis str. MG05-1020] gi|218928294|ref|YP_002346169.1| tol-pal system protein YbgF [Yersinia pestis CO92] gi|229841063|ref|ZP_04461222.1| SecB-dependent secretory protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843167|ref|ZP_04463313.1| SecB-dependent secretory protein [Yersinia pestis biovar Orientalis str. India 195] gi|294503131|ref|YP_003567193.1| hypothetical protein YPZ3_1021 [Yersinia pestis Z176003] gi|115346905|emb|CAL19792.1| putative exported protein [Yersinia pestis CO92] gi|149291248|gb|EDM41323.1| putative exported protein [Yersinia pestis CA88-4125] gi|165913697|gb|EDR32316.1| tol-pal system protein YbgF [Yersinia pestis biovar Orientalis str. IP275] gi|165923668|gb|EDR40800.1| tol-pal system protein YbgF [Yersinia pestis biovar Orientalis str. F1991016] gi|165989520|gb|EDR41821.1| tol-pal system protein YbgF [Yersinia pestis biovar Antiqua str. E1979001] gi|166962562|gb|EDR58583.1| tol-pal system protein YbgF [Yersinia pestis biovar Orientalis str. MG05-1020] gi|229689514|gb|EEO81575.1| SecB-dependent secretory protein [Yersinia pestis biovar Orientalis str. India 195] gi|229697429|gb|EEO87476.1| SecB-dependent secretory protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|262361167|gb|ACY57888.1| hypothetical protein YPD4_0979 [Yersinia pestis D106004] gi|262365276|gb|ACY61833.1| hypothetical protein YPD8_1148 [Yersinia pestis D182038] gi|294353590|gb|ADE63931.1| hypothetical protein YPZ3_1021 [Yersinia pestis Z176003] Length = 269 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 52/156 (33%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPF 89 G + + Y AV L+++ + +A F + +P Sbjct: 122 TAAGSSGNADAGAAASTAAPAASTGDENSDYNVAVSLALEKKQYDQAITVFQSFVKQYPK 181 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 182 STYQPNANYWLGQLYYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGV--------IM 233 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ + +++++Y N+ K A+ ++ Sbjct: 234 QDKGQSDKAKAVYQQVIKQYPNTDAAKQAQKRLSAL 269 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 50/129 (38%), Gaps = 14/129 (10%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S + + +++ + V++Y S Y A +++ G+ Sbjct: 150 SDYNVAVSLALEKKQYDQAITVFQSFVKQYPKSTYQPNANYWL--------------GQL 195 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y +G+ A + +V+ NY + + EAM ++ D+A+ V + ++YP Sbjct: 196 YYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPN 255 Query: 260 GYWARYVET 268 A+ + Sbjct: 256 TDAAKQAQK 264 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 22/126 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y QA ++ + ++ QYP+S Y +G Y + Y + +V+ Sbjct: 163 KQYDQAITVFQSFVKQYPKSTYQPNANYWLGQLYYNKGKKDD--------AAYYYAVVVK 214 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SP A F V V + Y Q V+ Y + + A+ Sbjct: 215 NYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVY--------------QQVIKQYPNTDAAK 260 Query: 228 EAMARL 233 +A RL Sbjct: 261 QAQKRL 266 >gi|308271858|emb|CBX28466.1| hypothetical protein N47_G37900 [uncultured Desulfobacterium sp.] Length = 281 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 52/128 (40%), Gaps = 8/128 (6%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + E+Y A+ + ++ A + + +P + A Y Y++A Sbjct: 160 SEDEIYASALKLYDGEKYAAARQKLQEILSKYPNSDKADNCQFWIGESYYQEKWYEKAIV 219 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 ++ I +YP+ + G+S+ + D++ +KL ++ +++++ NS Sbjct: 220 EYQKVIEKYPKGNKMKASLLKQGLSFYNLG-----DKKNSKL---VLNELIQKFPNSNEA 271 Query: 176 KGARFYVT 183 K A + Sbjct: 272 KIAESKLK 279 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 46/122 (37%), Gaps = 14/122 (11%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 YD Q + I+ +Y NS + IG Y + Y A Sbjct: 172 YDGEKYAAARQKLQEILSKYPNSDKADNCQ--------------FWIGESYYQEKWYEKA 217 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 I +Q V+ Y + ++ + ++ L ++ V++ + +++P A+ E+ Sbjct: 218 IVEYQKVIEKYPKGNKMKASLLKQGLSFYNLGDKKNSKLVLNELIQKFPNSNEAKIAESK 277 Query: 270 VK 271 +K Sbjct: 278 LK 279 >gi|196228082|ref|ZP_03126949.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] gi|196227485|gb|EDY21988.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] Length = 1038 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 65/185 (35%), Gaps = 13/185 (7%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 +FA T +A L + + +++ +A + ++ A Sbjct: 5 RRFAPTAIVCLASSILG-----TGPAMAQAPAAPQTLDQQMMAEAQQLFDQGKYADAAAK 59 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI--TQYPE--SKNVDYVYY 135 F + + FP ++ + + Y AG+Y QA + ++ + P + + Sbjct: 60 FEELVKKFPQVPTVPQANFSAGYSFYLAGEYDQAIADFKKVLDAKNLPAEYAPTAELALS 119 Query: 136 LVGMSY----AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 + + A+M + + ++ + +Y NS + A + ++ QL+ Sbjct: 120 MTAQALSAKAAKMAPEDQRRKTTLDDAVKGFDAFLAKYPNSEEAESATYGKSLALFQLSR 179 Query: 192 KEVEI 196 + I Sbjct: 180 YDEAI 184 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 58/192 (30%), Gaps = 26/192 (13%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 ++ S+A F + + DFP + A S A + KY Sbjct: 571 PKSQYTPAALFALGKAQAGTNQASEALNTFKKVATDFPKSDPAPFSYFERASILQKEQKY 630 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + +E+I YP S + Y + I+ + D + V + Sbjct: 631 DDCVTTMKEFIKNYPNSPALFQAY-----DFIAQIQTMKKDGGM--DAVATYEEFVAKKP 683 Query: 171 NSPYVKGARFYVTVGRN--------QLAAKEVEIGRYYLKRGEYVAAIPR----FQLVLA 218 P A + LA +E KR E+ I + + +L Sbjct: 684 KDPSTPDALLKLAALWKGYTDSQGTYLAIEE-------AKRTEWKKGIEKSLQAAEKLLT 736 Query: 219 NYSDAEHAEEAM 230 + D+ +A+ Sbjct: 737 EFPDSPQVAKAL 748 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 25/200 (12%), Positives = 55/200 (27%), Gaps = 23/200 (11%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +A ++ F A P +A + + GK +A +E Sbjct: 472 ARAGAQIELGQFDPAIAALKDTLSKNPPKDLAVDANFYLGTIYAKTGKVAEAIKQFKEVR 531 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 ++ + + +Y VG + K + + ++Y S Y A Sbjct: 532 DKFSGTPQAEQAHYQVG---------QMLSETDAKGAIPELESFFKKYPKSQYTPAA--- 579 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 + A + A+ F+ V ++ ++ A + Sbjct: 580 LFALGKAQAG-----------TNQASEALNTFKKVATDFPKSDPAPFSYFERASILQKEQ 628 Query: 242 LMDEAREVVSLIQERYPQGY 261 D+ + + YP Sbjct: 629 KYDDCVTTMKEFIKNYPNSP 648 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 42/211 (19%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 +D + + ++ K ++A + F + F A + Sbjct: 491 KDTLSKNPPKDLAVDANFYLGTIYAKTGKVAEAIKQFKEVRDKFSGTPQAEQ-------A 543 Query: 104 QYSAG------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 Y G + A E + +YP+S+ + +G + A + Sbjct: 544 HYQVGQMLSETDAKGAIPELESFFKKYPKSQYTPAALFALGKAQAGTNQ--------ASE 595 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 L ++ + S + R + KE +Y + + + Sbjct: 596 ALNTFKKVATDFPKSDPAPFSY----FERASILQKE----------QKYDDCVTTMKEFI 641 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEARE 248 NY ++ L +AY +A + ++ Sbjct: 642 KNYPNSPA-------LFQAYDFIAQIQTMKK 665 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 29/199 (14%), Positives = 72/199 (36%), Gaps = 23/199 (11%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 K ++ KA YF++ + +P + + +L A Q G++ A + ++ +++ P Sbjct: 442 KHKDAPKAIHYFDEGIKMYPKSKLLGSMVLARAGAQIELGQFDPAIAALKDTLSKNPPKD 501 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + +G YA+ ++ + ++++ +P + A Sbjct: 502 LAVDANFYLGTIYAKT--------GKVAEAIKQFKEVRDKFSGTPQAEQA---------- 543 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 ++G+ + AIP + Y +++ A+ L +A EA Sbjct: 544 ----HYQVGQMLSETDA-KGAIPELESFFKKYPKSQYTPAALFALGKAQAGTNQASEALN 598 Query: 249 VVSLIQERYPQGYWARYVE 267 + +P+ A + Sbjct: 599 TFKKVATDFPKSDPAPFSY 617 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 14/179 (7%) Query: 97 LLMSAFVQ--YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 M A Q + GKY AA+ EE + ++P+ V + G S+ YDQ Sbjct: 38 QQMMAEAQQLFDQGKYADAAAKFEELVKKFPQVPTVPQANFSAGYSFYLAG---EYDQ-- 92 Query: 155 TKLMLQYMSRIV--ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA-AIP 211 + +++ + + Y A +++ L+AK ++ +R + A+ Sbjct: 93 ---AIADFKKVLDAKNLP-AEYAPTAELALSMTAQALSAKAAKMAPEDQRRKTTLDDAVK 148 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 F LA Y ++E AE A A L+ DEA + ++ Q + E L+ Sbjct: 149 GFDAFLAKYPNSEEAESATYGKSLALFQLSRYDEAITALKANLAKFIQSPTVQDSEYLL 207 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 13/103 (12%), Positives = 32/103 (31%), Gaps = 9/103 (8%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE----EYITQYPESKN 129 A + F+ +P + A + + + +Y +A + + ++I S Sbjct: 144 DDAVKGFDAFLAKYPNSEEAESATYGKSLALFQLSRYDEAITALKANLAKFIQ----SPT 199 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRA-TKLMLQYMSRIVERYTN 171 V YL+G++ A + + + Sbjct: 200 VQDSEYLLGLTMAAKATSEKQKPGPEAAKADAEFDEAEKLFRD 242 >gi|123443144|ref|YP_001007118.1| tol-pal system protein YbgF [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332160931|ref|YP_004297508.1| tol-pal system protein YbgF [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|122090105|emb|CAL12968.1| putative exported protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318604838|emb|CBY26336.1| TPR repeat containing exported protein; Putative periplasmic protein contains a protein prenylyltransferase domain [Yersinia enterocolitica subsp. palearctica Y11] gi|325665161|gb|ADZ41805.1| tol-pal system protein YbgF [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330864067|emb|CBX74144.1| uncharacterized protein ybgF [Yersinia enterocolitica W22703] Length = 269 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 49/126 (38%), Gaps = 9/126 (7%) Query: 61 YEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y AV L+++ + +A F + +P + + + Y+ GK AA Sbjct: 152 YNAAVSLALEKKQYDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAV 211 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ + +++++Y N+ K A+ Sbjct: 212 VVKNYPKSPKSSEAMFKVGV--------IMQDKGQSDKAKAVYQQVIKQYPNTDAAKQAQ 263 Query: 180 FYVTVG 185 ++ Sbjct: 264 KRLSAL 269 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 14/129 (10%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S + +++ + V++Y S Y A +++ G+ Sbjct: 150 SDYNAAVSLALEKKQYDQAITAFQGFVKQYPKSTYQPNANYWL--------------GQL 195 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y +G+ A + +V+ NY + + EAM ++ D+A+ V + ++YP Sbjct: 196 YYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPN 255 Query: 260 GYWARYVET 268 A+ + Sbjct: 256 TDAAKQAQK 264 >gi|298292992|ref|YP_003694931.1| tol-pal system protein YbgF [Starkeya novella DSM 506] gi|296929503|gb|ADH90312.1| tol-pal system protein YbgF [Starkeya novella DSM 506] Length = 321 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 41/134 (30%), Gaps = 22/134 (16%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + K L A+ Y Q+A+ E++I YP + YY +G + Q Sbjct: 196 SPKDLYDLAYGYMLRQDYAQSATSFEQFIKLYPNDRAAPDAYYWLGETQFQR-------- 247 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + K Q ++ Y N+ A + + K+ AA Sbjct: 248 KTYKEAAQNFLKVSTDYPNAVKAPDALLRLGQSLAAIGEKD--------------AACAT 293 Query: 213 FQLVLANYSDAEHA 226 V Y A Sbjct: 294 LNAVNNKYPRASAT 307 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 20/123 (16%) Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 ++Y M+R Y Q AT + ++ Y N A +++ + Sbjct: 203 LAYGYMLRQ-DYAQSAT-----SFEQFIKLYPNDRAAPDAYYWLGETQ------------ 244 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 +R Y A F V +Y +A A +A+ RL ++ A+ D A ++ + +YP Sbjct: 245 --FQRKTYKEAAQNFLKVSTDYPNAVKAPDALLRLGQSLAAIGEKDAACATLNAVNNKYP 302 Query: 259 QGY 261 + Sbjct: 303 RAS 305 Score = 43.6 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 38/95 (40%), Gaps = 6/95 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + + +++Y+ A ++ Q+++++ F Q + +P A + Q+ Sbjct: 189 NPMPPSNSPKDLYDLAYGYMLRQDYAQSATSFEQFIKLYPNDRAAPDAYYWLGETQFQRK 248 Query: 109 KYQQAASLGEEYITQ---YPESKNVDYVYYLVGMS 140 Y++A + ++ YP + +G S Sbjct: 249 TYKEA---AQNFLKVSTDYPNAVKAPDALLRLGQS 280 Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 27/76 (35%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 D Y + + + +A + F + S D+P A A +LL + G+ Sbjct: 228 PNDRAAPDAYYWLGETQFQRKTYKEAAQNFLKVSTDYPNAVKAPDALLRLGQSLAAIGEK 287 Query: 111 QQAASLGEEYITQYPE 126 A + +YP Sbjct: 288 DAACATLNAVNNKYPR 303 >gi|297539674|ref|YP_003675443.1| tol-pal system protein YbgF [Methylotenera sp. 301] gi|297259021|gb|ADI30866.1| tol-pal system protein YbgF [Methylotenera sp. 301] Length = 282 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 59/143 (41%), Gaps = 8/143 (5%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S V + + ++ E A KE A+ +++ +D+P + +A ++ + Sbjct: 144 STPVVAAAPAKNTQEYQLLELANGLSKESKHKDAFNAYDKFLKDYPNSTLAAEATYGLGY 203 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Q++ Y+ A + ++ I +PES V ++ M+ +Q+ + + + Sbjct: 204 SQFALKNYKSAIATQQKVIDLHPESPKVPDA--MLNMANSQI--QLGLVPG----AKKTL 255 Query: 163 SRIVERYTNSPYVKGARFYVTVG 185 ++ ++ NS A+ + Sbjct: 256 RDLIAQFPNSEVTPTAQKRLKAL 278 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 39/106 (36%), Gaps = 14/106 (13%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 K + ++ Y NS A + + + L Y +AI Q Sbjct: 175 KDAFNAYDKFLKDYPNSTLAAEATYGLGYSQFAL--------------KNYKSAIATQQK 220 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 V+ + ++ +AM + + + L L+ A++ + + ++P Sbjct: 221 VIDLHPESPKVPDAMLNMANSQIQLGLVPGAKKTLRDLIAQFPNSE 266 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 22/137 (16%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 LL A K++ A + ++++ YP S Y +G S + + K Sbjct: 161 LLELANGLSKESKHKDAFNAYDKFLKDYPNSTLAAEATYGLGYSQFAL--------KNYK 212 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + ++++ + SP V A + + QL G A + + Sbjct: 213 SAIATQQKVIDLHPESPKVPDAMLNMANSQIQL--------------GLVPGAKKTLRDL 258 Query: 217 LANYSDAEHAEEAMARL 233 +A + ++E A RL Sbjct: 259 IAQFPNSEVTPTAQKRL 275 >gi|186477206|ref|YP_001858676.1| tol-pal system protein YbgF [Burkholderia phymatum STM815] gi|184193665|gb|ACC71630.1| tol-pal system protein YbgF [Burkholderia phymatum STM815] Length = 249 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 51/137 (37%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T + E + A + +F A F +P + + Y+ Sbjct: 121 EGTVQPGETEAFNAASQQFRSGDFKNAAASFRSFITRYPQSPYQPTAQYWLGNALYALRD 180 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ + S+ + + +YP+ L+ ++ Q+ + Q+A + + +IV +Y Sbjct: 181 YKGSTSVWQGVVQKYPQHPRAPEA--LLAIANNQLEQG----QKAA--AKKTLEQIVAQY 232 Query: 170 TNSPYVKGARFYVTVGR 186 S + A+ ++ + Sbjct: 233 GGSDVAQSAQSKLSQIK 249 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 35/109 (32%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + RY SPY A++++ + R +Y + Sbjct: 142 GDFKNAAASFRSFITRYPQSPYQPTAQYWL--------GNALYALR------DYKGSTSV 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q V+ Y A EA+ + + A++ + I +Y Sbjct: 188 WQGVVQKYPQHPRAPEALLAIANNQLEQGQKAAAKKTLEQIVAQYGGSD 236 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 54/132 (40%), Gaps = 22/132 (16%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Q+ +G ++ AA+ +IT+YP+S Y +G + + R K Sbjct: 138 QFRSGDFKNAAASFRSFITRYPQSPYQPTAQYWLGNALYAL--------RDYKGSTSVWQ 189 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 +V++Y P A + I L++G+ AA + ++A Y + Sbjct: 190 GVVQKYPQHPRAPEAL--------------LAIANNQLEQGQKAAAKKTLEQIVAQYGGS 235 Query: 224 EHAEEAMARLVE 235 + A+ A ++L + Sbjct: 236 DVAQSAQSKLSQ 247 >gi|197119877|ref|YP_002140304.1| TPR domain-containing protein [Geobacter bemidjiensis Bem] gi|197089237|gb|ACH40508.1| TPR domain lipoprotein [Geobacter bemidjiensis Bem] Length = 283 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 48/146 (32%), Gaps = 8/146 (5%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 + + + + +Y+K +KE N KA E F+ P +A Sbjct: 142 MAKMEKGVEEQAKKEAELQQAPEYLYQKGYEAMKEGNLPKARELFSSFLEHHPKHNLAAN 201 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + YS K++ A E I YP GM++ + + Sbjct: 202 AQYWIGESYYSEKKFENAVLEFENVIKNYPNKDKAPAAMLKQGMAF--------RELGDS 253 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFY 181 K + ++VE + S K AR Sbjct: 254 KSANYILKKLVEEHPKSEEAKIAREK 279 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 14/110 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + S +E + A+++ IG Y ++ A+ F+ V Sbjct: 181 KARELFSSFLEHHPKHNLAANAQYW--------------IGESYYSEKKFENAVLEFENV 226 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 + NY + + A AM + A+ L A ++ + E +P+ A+ Sbjct: 227 IKNYPNKDKAPAAMLKQGMAFRELGDSKSANYILKKLVEEHPKSEEAKIA 276 >gi|237746663|ref|ZP_04577143.1| tol-Pal cell envelope complex subunit YbgF [Oxalobacter formigenes HOxBLS] gi|229378014|gb|EEO28105.1| tol-Pal cell envelope complex subunit YbgF [Oxalobacter formigenes HOxBLS] Length = 245 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 46/137 (33%), Gaps = 8/137 (5%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 VT + + Y +A ++ A ++ + FP + +A K+ Y G Sbjct: 116 KEVTVEADEGQSYSRAEELFAAADYKGAVSAYSDFLKRFPKSHLAAKAQYQLGNAYYMQG 175 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 Y+ A + +YP++ + + + +S +V + Sbjct: 176 DYKSALKNQSAVVRRYPKNPITPEA--------MLNMASCQIGLKDLASAKKTLSELVRK 227 Query: 169 YTNSPYVKGARFYVTVG 185 Y S KGA+ + Sbjct: 228 YPASEAAKGAKERLAQL 244 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 14/113 (12%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 K + S ++R+ S A++ + G Y +G+Y +A+ Sbjct: 141 KGAVSAYSDFLKRFPKSHLAAKAQYQL--------------GNAYYMQGDYKSALKNQSA 186 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 V+ Y EAM + + L + A++ +S + +YP A+ + Sbjct: 187 VVRRYPKNPITPEAMLNMASCQIGLKDLASAKKTLSELVRKYPASEAAKGAKE 239 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 22/131 (16%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++A Y+ A S +++ ++P+S Y +G +Y Q K L+ S Sbjct: 135 FAAADYKGAVSAYSDFLKRFPKSHLAAKAQYQLGNAYYM--------QGDYKSALKNQSA 186 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V RY +P A + + L + +A ++ Y +E Sbjct: 187 VVRRYPKNPITPEAMLNMASCQIGL--------------KDLASAKKTLSELVRKYPASE 232 Query: 225 HAEEAMARLVE 235 A+ A RL + Sbjct: 233 AAKGAKERLAQ 243 >gi|291569640|dbj|BAI91912.1| serine/threonine protein kinase containing TPR domain [Arthrospira platensis NIES-39] Length = 732 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 69/206 (33%), Gaps = 32/206 (15%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L IA LVG L+ V+ + + ++ V L+ + A + FN+ Sbjct: 311 LWTVVGIAATGLVGLMVIFGLFQVLNRPDPVKSEAAL-KRGVERLEAGDPEAAIKAFNRS 369 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + FP A + A Y KY+QA + + I P + ++ Y+ ++Y Q Sbjct: 370 IQLFPDNSEAFR---KRANAYYDLQKYEQAIADYTQAIKLDPTNPDI---YFNRSLAYHQ 423 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 M + +++++ + LA + Sbjct: 424 M--------GDFGNAINDLNQVIRLNPEDTDA--------FYQRGLAHY---------TQ 458 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEA 229 Y AAI + V+ D A A Sbjct: 459 ENYEAAILDYTEVIRRQPDHSEAYRA 484 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 58/181 (32%), Gaps = 33/181 (18%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y++ + ++N+ A + + R P A ++ AG Q + E Sbjct: 449 YQRGLAHYTQENYEAAILDYTEVIRRQPDHSEAYRAR---GSAHVKAGNLQAGMADYTEA 505 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I P+S YY G + + + L ++++ ++ A Sbjct: 506 IRLNPQSAA---AYYNRGRARFHL--------GDYQGALADYNQVISWEPDN-----AEA 549 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARL-VEAYV 238 Y Y+ G Y AAI + A ++ +A L V+ Y Sbjct: 550 YGNRCST------------YINLGNYEAAIESCSRSIQLNPTAMDYNNRCIAYLNVQNYD 597 Query: 239 A 239 A Sbjct: 598 A 598 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 24/87 (27%), Gaps = 19/87 (21%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ------Y- 105 + + Y + ++ A +NQ P +A Y Sbjct: 509 NPQSAAAYYNRGRARFHLGDYQGALADYNQVISWEP----------DNAEAYGNRCSTYI 558 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDY 132 + G Y+ A I P +DY Sbjct: 559 NLGNYEAAIESCSRSIQLNPT--AMDY 583 >gi|311747248|ref|ZP_07721033.1| putative ATP synthase F1, delta subunit [Algoriphagus sp. PR1] gi|126578959|gb|EAZ83123.1| putative ATP synthase F1, delta subunit [Algoriphagus sp. PR1] Length = 995 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 69/219 (31%), Gaps = 31/219 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y AV+ + N +A N +P + +L + Y +A+ + Sbjct: 581 YYRLAVVQNFQNNNQQALGQLNTLISRYPNSLYYEDALFQKGQINMEETNYSEASRAFSD 640 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 IT P S V Y ++ M + + + I++++ N+ + A Sbjct: 641 LITGKPNSPFVPYALESRAVANFSM--------QNYEQTISDYKTILDKHPNAQNSETAL 692 Query: 180 FYVTVGR----------NQLAAK-------------EVEIGRYYLKRGEYVAAIPRFQLV 216 + + LA E E + Y A + Sbjct: 693 KGLQETLALQGRSGEFSDYLARYKGSNPSSSSVQTLEFESAKSMYFDKNYTQASKALENY 752 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 L NY + +A+ L ++Y L +A E +++ Sbjct: 753 LRNYPQSAQRLDALYFLGDSYFQLGDKTKALEQFKALEQ 791 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 29/208 (13%), Positives = 71/208 (34%), Gaps = 29/208 (13%) Query: 58 REVYEKAVLFLKEQNFSKAYEYF----NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + +Y + Q +S+A E F ++ ++L Y ++ +A Sbjct: 504 KSLYGLGYSYFNSQQYSRAEEEFKTYTDRLRSRQNKENY-DDAMLRLGDCYYVQKRFSEA 562 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 ++ ++ +K +DY YY + + + L ++ ++ RY NS Sbjct: 563 SATFQQ--AINDGNKGIDYAYYRLAVVQNFQN--------NNQQALGQLNTLISRYPNSL 612 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y + A + G+ ++ Y A F ++ ++ A+ Sbjct: 613 YYEDAL--------------FQKGQINMEETNYSEASRAFSDLITGKPNSPFVPYALESR 658 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGY 261 A ++ ++ I +++P Sbjct: 659 AVANFSMQNYEQTISDYKTILDKHPNAQ 686 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 26/212 (12%), Positives = 67/212 (31%), Gaps = 28/212 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +E A ++N+++A + R++P + +L + G +A + Sbjct: 730 FESAKSMYFDKNYTQASKALENYLRNYPQSAQRLDALYFLGDSYFQLGDKTKALEQFKA- 788 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + Q P S + +G+ + + + + Y+ AR Sbjct: 789 LEQEPASPQRLRAMHRIGI--------MELELGNFEQAIPYLKTS---------AANARS 831 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN---YSDAEHAEEAMARLVEAY 237 + A + + + + + +Y AI +L ++ +A+ ++ Sbjct: 832 KIEEAE---AVEGLMVANF--ETRKYNEAISNADQLLTLDGIIPES--TPKALLTKAKSE 884 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETL 269 +A + + Y A + L Sbjct: 885 RETNQKADAEITLMTLVNEYKTIQGAEGLYWL 916 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 83/260 (31%), Gaps = 59/260 (22%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN----------QCSRDFPFAGVAR 94 + Y++S + E+Y+ + + +N+ +A EY Q S + + Sbjct: 268 EAYINSRKGTLSREEIYKAGISLFEIENYPRAAEYLKNSASATDELGQASSYYLGHAYLK 327 Query: 95 K-------------------------SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + +L+ A V G +Q A + ++Y+ +YP + Sbjct: 328 QENFQFASTSFAAAAKSDFNKQIQEDALVNYAKVNLQKGSFQLAITALDDYLEKYPNGSH 387 Query: 130 VDYVY------------YLVGMSYAQMI-RDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + YL + I Q A + + + + Y + Y Sbjct: 388 KAEMETLLSEALVNTNDYLRAIEQMDRITNKSARIQTAYQKV--AFYQAMVYYRDQRY-D 444 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA------AIPRFQLVLANYSDAEHAE--E 228 GA Y+ K + + ++ K Y A AI +Q ++ A + Sbjct: 445 GAIAYLDKSLAYPIDKTMVLESHFWKGESYSADGNLPEAIKSYQQAISLGRTTSSAYLTK 504 Query: 229 AMARLVEAYVALALMDEARE 248 ++ L +Y A E Sbjct: 505 SLYGLGYSYFNSQQYSRAEE 524 >gi|332525606|ref|ZP_08401761.1| putative transmembrane protein [Rubrivivax benzoatilyticus JA2] gi|332109171|gb|EGJ10094.1| putative transmembrane protein [Rubrivivax benzoatilyticus JA2] Length = 247 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 48/133 (36%), Gaps = 8/133 (6%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 +R YE A+ L+ +F KA + +P +G + QY Y+ A Sbjct: 123 TADERAAYEDAMGVLRTGDFDKASTALSGFLTRYPSSGYVDSARFWLGNAQYGRRDYKGA 182 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + ++ P+ L+ ++ +Q + + T+ + + +++ Y S Sbjct: 183 IASFRAFVAAAPQHPRAPEA--LLALANSQA------EAKDTRAARRTIDELLKTYPKSE 234 Query: 174 YVKGARFYVTVGR 186 + + + Sbjct: 235 AAVAGKERLASLK 247 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 +S + RY +S YV ARF++ + R +Y AI Sbjct: 140 GDFDKASTALSGFLTRYPSSGYVDSARFWLGNAQ--------------YGRRDYKGAIAS 185 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 F+ +A A EA+ L + AR + + + YP+ Sbjct: 186 FRAFVAAAPQHPRAPEALLALANSQAEAKDTRAARRTIDELLKTYPKSE 234 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 39/129 (30%), Gaps = 22/129 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 G + +A++ ++T+YP S VD + +G + R K + Sbjct: 138 RTGDFDKASTALSGFLTRYPSSGYVDSARFWLGNAQYGR--------RDYKGAIASFRAF 189 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V P A + N A + AA +L Y +E Sbjct: 190 VAAAPQHPRAPEA---LLALANSQAE-----------AKDTRAARRTIDELLKTYPKSEA 235 Query: 226 AEEAMARLV 234 A RL Sbjct: 236 AVAGKERLA 244 >gi|237738478|ref|ZP_04568959.1| tetratricopeptide repeat family protein [Fusobacterium mortiferum ATCC 9817] gi|229420358|gb|EEO35405.1| tetratricopeptide repeat family protein [Fusobacterium mortiferum ATCC 9817] Length = 942 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 76/216 (35%), Gaps = 26/216 (12%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQA 113 VY + + + + A YF +D + K + KY+ A Sbjct: 506 SSPNSVYLRGIASMGMGKYQDASNYFIIVEQDTTTTPELMEKIKFNKLRNAFLWEKYEDA 565 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 GEEYI+QYP +N V +SY +M + +Y +++ + Sbjct: 566 IKYGEEYISQYPNGENRAEVLDKTALSYFRMDN--------FEKSKEYYTQLQSIPNYNE 617 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y +I Y +G+Y A+ ++Q V Y D+++ E A Sbjct: 618 YAT-----------------FQIADSYYAQGKYDEALGKYQEVYTKYPDSKYGESANYWY 660 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 + + + L DE + ++YP + L Sbjct: 661 LNSLINLKKYDEFEKAKEEFIKKYPNSEMKENIYIL 696 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 80/211 (37%), Gaps = 29/211 (13%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G + S + L + Y++ +Y+ +L ++N+ A E F + Sbjct: 110 IGDKNSSEEYLKLIDTKNEYYEKAIYDTGTTYLSQENYPLAEESFQRIIALN--GKYYND 167 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 ++L + + Y+ G Y ++ + +Y + KN+ ++ YL+G SY ++ + Sbjct: 168 AILSMSLLSYNKGDYNRSIAYLNQYAQLK-DKKNIVFMNYLLGSSYYKLNQ--------V 218 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 L +Y V+ +S Y + A + Y +GE + + Q Sbjct: 219 DLATRYFEESVKESKDSTYGRKASLNLVEI--------------YSNKGE----LEKAQG 260 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEA 246 + + E M L ++Y +A Sbjct: 261 KIDILQNTPDYSEGMRILGDSYATKGDYQKA 291 >gi|293397220|ref|ZP_06641493.1| conserved hypothetical protein [Serratia odorifera DSM 4582] gi|291420240|gb|EFE93496.1| conserved hypothetical protein [Serratia odorifera DSM 4582] Length = 261 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 9/124 (7%) Query: 61 YEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y AV L+++ + +A F + +P + + + Y+ GK AA Sbjct: 145 YNAAVSLALEKKQYDQAISAFQGFIKQYPKSTYQPNANYWLGQLFYNKGKKDDAAYYFAV 204 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S Y VG+ + ++ +++++Y S K A Sbjct: 205 VVKNYPKSPKAPDAMYKVGI--------IMQEKGQADKAKAVFQQVIKQYPTSDAAKQAN 256 Query: 180 FYVT 183 + Sbjct: 257 KRIA 260 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 47/129 (36%), Gaps = 14/129 (10%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S + +++ + +++Y S Y A +++ + Sbjct: 143 SDYNAAVSLALEKKQYDQAISAFQGFIKQYPKSTYQPNANYWLGQL-------------F 189 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y K + AA F +V+ NY + A +AM ++ D+A+ V + ++YP Sbjct: 190 YNKGKKDDAA-YYFAVVVKNYPKSPKAPDAMYKVGIIMQEKGQADKAKAVFQQVIKQYPT 248 Query: 260 GYWARYVET 268 A+ Sbjct: 249 SDAAKQANK 257 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 29/83 (34%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 Y LF + A YF +++P + A ++ + G+ Sbjct: 173 PKSTYQPNANYWLGQLFYNKGKKDDAAYYFAVVVKNYPKSPKAPDAMYKVGIIMQEKGQA 232 Query: 111 QQAASLGEEYITQYPESKNVDYV 133 +A ++ ++ I QYP S Sbjct: 233 DKAKAVFQQVIKQYPTSDAAKQA 255 >gi|262382545|ref|ZP_06075682.1| TPR repeat-containing protein [Bacteroides sp. 2_1_33B] gi|262295423|gb|EEY83354.1| TPR repeat-containing protein [Bacteroides sp. 2_1_33B] Length = 999 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 30/239 (12%), Positives = 72/239 (30%), Gaps = 45/239 (18%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + + ++ ++KA + + + + + + +Y +A Sbjct: 466 NDAYFWRGESYYRQGEYNKAISDYRTYLNNTRQRNTDMYALAHYNLGYSYFKLKEYGEAL 525 Query: 115 SLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM-------------- 158 + +Y+ ++ Y +G + ++ T+ Sbjct: 526 NRFRQYVNMESNQQTPAYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQK 585 Query: 159 -------------LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 + M R++ + S YV A E GR Y+ Sbjct: 586 GFLLGLQKDYKGKISVMDRLIREFPESQYVDDAL--------------FEKGRSYVLLDN 631 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 AA F+ ++ ++ + A +A +L Y ++A E + YP A+ Sbjct: 632 NQAAAASFEQLMRDFPQSSLARKAGVQLGLIYFNDNQPEKAAEAYKSVISNYPGSEEAK 690 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 70/197 (35%), Gaps = 31/197 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ + E+N+++A + ++ + LL Y+ S+ + Sbjct: 554 LFHNRQFAMAEENYTRAAQLQPSAGD---YSVYQKGFLLGL------QKDYKGKISVMDR 604 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I ++PES+ VD + G SY + + + +++ + S + A Sbjct: 605 LIREFPESQYVDDALFEKGRSYVLLDNN--------QAAAASFEQLMRDFPQSSLARKAG 656 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + Y + A ++ V++NY +E A+ A+ L Y+ Sbjct: 657 VQLGLI--------------YFNDNQPEKAAEAYKSVISNYPGSEEAKVALQDLKSVYIE 702 Query: 240 LALMDEAREVVSLIQER 256 L ++ + + Sbjct: 703 LNDINSFAAYANSLGGN 719 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 93/268 (34%), Gaps = 57/268 (21%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 I +C +VG S + Y ++ + +N+S + + Sbjct: 4 ILIPLCLVVGSHMASGQRSY-----QFDAPNRLFVEGKELFSLKNYSGCIDKLEAYKQHS 58 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--- 144 + +++ M + Y G+ A L ++Y+ YP S++ D V +L+G ++ Sbjct: 59 TDVDLIQEADYMLVYSAYEQGR-PNAVELLKDYLDVYPASRHADEVNFLIGSAHFGQGEY 117 Query: 145 -----------IRDVPYDQRAT---------------KLMLQYMSRIVERYTNSPYVKGA 178 I + +Q+ + Y +RI + + Y + + Sbjct: 118 QKAIFWFNESNIDMLSPEQQEAYCFRLAYSLLQTGDMEKARGYFARIEQI--GTKYREAS 175 Query: 179 RFYVTVG-------RNQLAA----------KE---VEIGRYYLKRGEYVAAIPRFQLVLA 218 +YV N L KE I + Y + +Y I + +LA Sbjct: 176 TYYVAYIDYATGKYNNALVEFTRLKDLPDYKERSLYYITQIYFIQNKYEKVISEGKELLA 235 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEA 246 +Y D+E+ E + AY L D+A Sbjct: 236 SYPDSENNSEVYRIMGNAYYHLRNEDQA 263 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 76/234 (32%), Gaps = 36/234 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGE 118 +++ KA + F++ + +R + Y G+Y +A S Sbjct: 431 LFQLGTQAFTNMELDKAVDLFSRAISLGAYNLESRNDAYFWRGESYYRQGEYNKAISDYR 490 Query: 119 EYITQYPESKNVD-YVY--YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SP 173 Y+ +N D Y Y +G SY ++ + L + V +N +P Sbjct: 491 TYLN-NTRQRNTDMYALAHYNLGYSYFKL--------KEYGEALNRFRQYVNMESNQQTP 541 Query: 174 YVKGARFYVTVG-------------RNQLAAKEVEIGRY--YLK------RGEYVAAIPR 212 A + + A + G Y Y K + +Y I Sbjct: 542 AYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQKGFLLGLQKDYKGKISV 601 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 ++ + ++++ ++A+ +YV L A + +PQ AR Sbjct: 602 MDRLIREFPESQYVDDALFEKGRSYVLLDNNQAAAASFEQLMRDFPQSSLARKA 655 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 36/84 (42%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 ++EK ++ N A F Q RDFP + +ARK+ + + ++ + Sbjct: 610 PESQYVDDALFEKGRSYVLLDNNQAAAASFEQLMRDFPQSSLARKAGVQLGLIYFNDNQP 669 Query: 111 QQAASLGEEYITQYPESKNVDYVY 134 ++AA + I+ YP S+ Sbjct: 670 EKAAEAYKSVISNYPGSEEAKVAL 693 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 49/167 (29%), Gaps = 32/167 (19%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S TD + ++Y V + + N+S A + R+ +++ + L Sbjct: 272 SSTDSPLRGDLYILGVCYYNKGNYSSAVNALGRTVREN--DALSQNAYLYLGQSYLKLKD 329 Query: 110 YQQAASLGE-----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 A E + + K Y +YA +I + + + Sbjct: 330 KNNARMAFEAAATSSFDK---QVKEA--AMY----NYALLIHETAF--TGFGESVTIFED 378 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + NS Y Y+ YL Y AA+ Sbjct: 379 FLNDFPNSKYADKVNDYLVEV--------------YLTTKNYQAALN 411 >gi|198273957|ref|ZP_03206489.1| hypothetical protein BACPLE_00093 [Bacteroides plebeius DSM 17135] gi|198273035|gb|EDY97304.1| hypothetical protein BACPLE_00093 [Bacteroides plebeius DSM 17135] Length = 1005 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 81/227 (35%), Gaps = 46/227 (20%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + D + +YE+ F++ ++ A + ++ + +P + ++RK+ + Sbjct: 607 NKLITDYPSSAYLDDALYEQGRAFVQMEDSENAIKRYSLLVQRYPESELSRKAANEIGLL 666 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVY---------------YLV------GMSYA 142 Y +Y++A + ++ IT+YP S Y+ G + Sbjct: 667 YYQNDRYEEAIAAYKQVITKYPGSAEARLAQRDLKSIYVDLNKVDDYMAFASTVPGGATF 726 Query: 143 QMIRDVPYDQRATKLML---------QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + A + ++R ++ + + A +Y+ + Sbjct: 727 NVSERDSLTYTAAERAYMRGDIAGAKTSLTRYLQSFPQGAFSVDASYYLGLID------- 779 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVA 239 + +Y AA R + VL +S +++ +A+A + AY Sbjct: 780 -------YNQKDYAAAAARLEEVLR-FSGSKYEGKALALCADMAYNQ 818 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 53/145 (36%), Gaps = 22/145 (15%) Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y + + IT YP S +D Y G ++ QM ++ ++ S +V Sbjct: 596 QRDYAGKIQVLNKLITDYPSSAYLDDALYEQGRAFVQM--------EDSENAIKRYSLLV 647 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 +RY S + A EIG Y + Y AI ++ V+ Y + A Sbjct: 648 QRYPESELSRKAAN--------------EIGLLYYQNDRYEEAIAAYKQVITKYPGSAEA 693 Query: 227 EEAMARLVEAYVALALMDEAREVVS 251 A L YV L +D+ S Sbjct: 694 RLAQRDLKSIYVDLNKVDDYMAFAS 718 Score = 43.6 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 87/215 (40%), Gaps = 28/215 (13%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLG 117 +Y K++ ++ A ++F +C ++ VA + + ++++A Sbjct: 512 LYCLGYSLFKQKQYNSARDWFVRCVQNGRTQEASVAGDAYNRIGDCYFYERRFEEAR--- 568 Query: 118 EEYITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 ++Y S ++ DY + G+ ++ + D +Q +++++ Y +S Y+ Sbjct: 569 QQYAQAVVTSPSLGDYSLFQEGI-----VKGLQRD--YAGK-IQVLNKLITDYPSSAYLD 620 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 A E GR +++ + AI R+ L++ Y ++E + +A + Sbjct: 621 DAL--------------YEQGRAFVQMEDSENAIKRYSLLVQRYPESELSRKAANEIGLL 666 Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Y +EA + +YP AR + +K Sbjct: 667 YYQNDRYEEAIAAYKQVITKYPGSAEARLAQRDLK 701 Score = 38.9 bits (90), Expect = 0.78, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 83/232 (35%), Gaps = 28/232 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115 ++ + ++ A +YF + + +K+ + + +Y +Y +AA+ Sbjct: 435 LFRMGTQLFAQADYRNAIDYFTRSLQL---GQYNQKTKADAYYWRGESKYRLERYPEAAN 491 Query: 116 LGEEYITQYPESKNVDY--VYYLVGMSYAQMIR-DVPYD----------QRATKLMLQYM 162 Y+ + + +Y Y +G S + + + D + + Sbjct: 492 DMRLYLEFASDKNSQEYGLALYCLGYSLFKQKQYNSARDWFVRCVQNGRTQEASVAGDAY 551 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN---QLAAKEVE---IGRYYLKRGEYVAAIPRFQLV 216 +RI + Y + AR L + I + + +Y I + Sbjct: 552 NRIGDCYFYERRFEEARQQYAQAVVTSPSLGDYSLFQEGIVKGLQR--DYAGKIQVLNKL 609 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + +Y + + ++A+ A+V + + A + SL+ +RYP+ +R Sbjct: 610 ITDYPSSAYLDDALYEQGRAFVQMEDSENAIKRYSLLVQRYPESELSRKAAN 661 Score = 35.5 bits (81), Expect = 8.3, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y ++ +++++ A + F + K+L + A + Y+ +Y +A +L + Sbjct: 773 YYLGLIDYNQKDYAAAAARLEEVL-RFSGSKYEGKALALCADMAYNQKEYAKALNLYKR 830 Score = 35.5 bits (81), Expect = 8.5, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 68/197 (34%), Gaps = 36/197 (18%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 L + + VY A + +Q + A + F + D F +A A + Sbjct: 166 AVLKETSKDFHNDAVYNLAYIDYVQQKYDTALQGFREVQDDRKFQKLAP---YYIADIYL 222 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 G Y QA + + Y+ Y E K+ + ++ + Y Q+ +Q + R Sbjct: 223 IKGNYAQARKVADAYLALYSEEKHAAQM--------NRISGEAAYGQKDYAAAIQSLERY 274 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 E + LA ++ G Y G Y A+ R A Sbjct: 275 HE-------AEEVPAR-------LAMYKL--GMSYFNTGVYSKALSRLGE-------ATG 311 Query: 226 AEEAMARLVEAYVALAL 242 A++A+A AY+ + L Sbjct: 312 AQDALA--QNAYLHMGL 326 >gi|315453520|ref|YP_004073790.1| putative lipoprotein [Helicobacter felis ATCC 49179] gi|315132572|emb|CBY83200.1| putative lipoprotein [Helicobacter felis ATCC 49179] Length = 213 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 72/200 (36%), Gaps = 12/200 (6%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 ++ S+A L + ++D + Y+ + + N A Y++ Sbjct: 3 VLWLSLACALLWLGCAKKNKDAIYNRPAIFW-----YQGILREILFMNLETADNYYSSLQ 57 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + + + ++L ++ A +EYI ++ NVDY+ YL + Sbjct: 58 SEHINSPLVPVAMLALGQAHLKKKEFVLAEYYFDEYIKRFGNESNVDYLKYLKLQARYYS 117 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IGRYYLK 202 ++ DQ + ++ V++Y NS ++ + + L E+ I Y K Sbjct: 118 FKNHSKDQEFMSNTIGMLNDFVDKYPNSRFINQVEYM--QVKFILGQNELNRAIANVYKK 175 Query: 203 RGEYVAA---IPRFQLVLAN 219 R + + R VL Sbjct: 176 RHQKEGVKRYLDRVDEVLEK 195 >gi|238765243|ref|ZP_04626172.1| hypothetical protein ykris0001_32580 [Yersinia kristensenii ATCC 33638] gi|238696515|gb|EEP89303.1| hypothetical protein ykris0001_32580 [Yersinia kristensenii ATCC 33638] Length = 260 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 49/126 (38%), Gaps = 9/126 (7%) Query: 61 YEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y AV L+++ + +A F + +P + + + Y+ GK AA Sbjct: 143 YNAAVSLALEKKQYDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAV 202 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ + +++++Y N+ K A+ Sbjct: 203 VVKNYPKSPKSSEAMFKVGV--------IMQDKGQSDKAKAVYQQVIKQYPNTDAAKQAQ 254 Query: 180 FYVTVG 185 ++ Sbjct: 255 KRLSAL 260 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 14/129 (10%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S + +++ + V++Y S Y A +++ G+ Sbjct: 141 SDYNAAVSLALEKKQYDQAITAFQGFVKQYPKSTYQPNANYWL--------------GQL 186 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y +G+ A + +V+ NY + + EAM ++ D+A+ V + ++YP Sbjct: 187 YYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPN 246 Query: 260 GYWARYVET 268 A+ + Sbjct: 247 TDAAKQAQK 255 >gi|238790500|ref|ZP_04634269.1| hypothetical protein yfred0001_12300 [Yersinia frederiksenii ATCC 33641] gi|238721444|gb|EEQ13115.1| hypothetical protein yfred0001_12300 [Yersinia frederiksenii ATCC 33641] Length = 260 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 52/156 (33%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPF 89 A + + Y AV L+++ + +A F + +P Sbjct: 113 AATGSSDTATAGAAAATAAPAASTGDENSDYNAAVSLALEKKQYDQAITAFQSFVKQYPK 172 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 173 STYQPNANYWLGQLYYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGV--------IM 224 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ + +++++Y N+ K A+ ++ Sbjct: 225 QDKGQSDKAKAVYQQVIKQYPNTDAAKQAQKRLSAL 260 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 14/129 (10%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S + +++ + V++Y S Y A +++ G+ Sbjct: 141 SDYNAAVSLALEKKQYDQAITAFQSFVKQYPKSTYQPNANYWL--------------GQL 186 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y +G+ A + +V+ NY + + EAM ++ D+A+ V + ++YP Sbjct: 187 YYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPN 246 Query: 260 GYWARYVET 268 A+ + Sbjct: 247 TDAAKQAQK 255 >gi|212703389|ref|ZP_03311517.1| hypothetical protein DESPIG_01432 [Desulfovibrio piger ATCC 29098] gi|212673235|gb|EEB33718.1| hypothetical protein DESPIG_01432 [Desulfovibrio piger ATCC 29098] Length = 161 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 55/145 (37%), Gaps = 8/145 (5%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94 Q + +Y+ + + + + +A F +++P +A Sbjct: 18 TGSTWGQPTPQPEAKPAAKKDISLALYDAGLNAFQARKYDEAQRSFADFMKNYPTHSMAP 77 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 + A + ++ AA + IT++ +S Y G+ +++M +Q+A Sbjct: 78 DAQYYLAECYFQRNQFPDAALAYDTVITKFSKSNRTPGAYLKQGICFSKM------NQKA 131 Query: 155 TKLMLQYMSRIVERYTNSPYVKGAR 179 M+ ++++Y NSP A+ Sbjct: 132 AAKAR--MNELIKKYPNSPEAARAK 154 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 48/144 (33%), Gaps = 22/144 (15%) Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 K++ Y G++ Q R + + ++ Y A++Y+ Sbjct: 37 KDISLALYDAGLNAFQA--------RKYDEAQRSFADFMKNYPTHSMAPDAQYYLAEC-- 86 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 Y +R ++ A + V+ +S + A + + + A+ Sbjct: 87 ------------YFQRNQFPDAALAYDTVITKFSKSNRTPGAYLKQGICFSKMNQKAAAK 134 Query: 248 EVVSLIQERYPQGYWARYVETLVK 271 ++ + ++YP A + +K Sbjct: 135 ARMNELIKKYPNSPEAARAKNFLK 158 >gi|91776689|ref|YP_546445.1| tetratricopeptide region [Methylobacillus flagellatus KT] gi|91710676|gb|ABE50604.1| Tetratricopeptide region [Methylobacillus flagellatus KT] Length = 274 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 58/138 (42%), Gaps = 9/138 (6%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 ++ D R++ E A F +A++ + + + +P + + +LL Q+S Sbjct: 140 PNNNADNPEARDL-EAARALAASGKFKEAFDAYGKFLQTYPRSALVPDALLGLGSAQFSL 198 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 Y+ + S ++ I+Q+PES V + + S I+ D + + +++ Sbjct: 199 KNYKASISTQQKLISQHPESDKVPDAMFSIANS---QIQLSDVD-----GAKKTLRELLD 250 Query: 168 RYTNSPYVKGARFYVTVG 185 ++ + A+ + V Sbjct: 251 KFPDHELAPSAKRRLNVL 268 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 42/104 (40%), Gaps = 14/104 (13%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 K + ++ Y S V A + + L Y A+I Q Sbjct: 165 KEAFDAYGKFLQTYPRSALVPDALLGLGSAQFSL--------------KNYKASISTQQK 210 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +++ + +++ +AM + + + L+ +D A++ + + +++P Sbjct: 211 LISQHPESDKVPDAMFSIANSQIQLSDVDGAKKTLRELLDKFPD 254 >gi|312888741|ref|ZP_07748306.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603] gi|311298785|gb|EFQ75889.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603] Length = 1020 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 71/227 (31%), Gaps = 38/227 (16%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++++ ++ + N FP + A S A+ + G +A S Sbjct: 591 LFQRGMIQGLQGALDSKINTLNSVLSQFPNSNYADDSAFEIAYAYFMKGNGDKAISDLLA 650 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I +YP S + +G+ +D L ++ ++V+ Y ++ K A Sbjct: 651 MIAKYPRSSYIPRALVTIGLVNYNAGKD--------DLAVESFKQVVKDYPSTDEAKQAL 702 Query: 180 FYVTVGRN--------------------QLAAKE--VEIG--RYYLKRGEYVAAIPRFQL 215 + A +E + YLK G++ + Sbjct: 703 KQIEKIYTDKGDAQTFITYAATTPIGNYTTAQQESIMYTAANNLYLK-GDWQGTVNAVNG 761 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + + +++ ++ V+L DEA + Y W Sbjct: 762 YFDKFPKPIYDKQSKFIRAQSLVSLNRGDEA-----VNDYNYILNDW 803 Score = 65.1 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 67/207 (32%), Gaps = 39/207 (18%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARK--------SLLMSAFVQYSAGKYQQAASLGEE 119 ++ + KA YF + A + ++ +A + Y +A + Sbjct: 526 FGDEQYKKAATYFERFLA-------AEQLDKNSINDAITRTADSYFVMKNYGKAMDYYDR 578 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I + + + DY + GM + Q A + ++ ++ ++ NS Y + Sbjct: 579 IINGHEKGE--DYALFQRGM--------IQGLQGALDSKINTLNSVLSQFPNSNYADDSA 628 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 EI Y +G AI ++A Y + + A+ + Sbjct: 629 --------------FEIAYAYFMKGNGDKAISDLLAMIAKYPRSSYIPRALVTIGLVNYN 674 Query: 240 LALMDEAREVVSLIQERYPQGYWARYV 266 D A E + + YP A+ Sbjct: 675 AGKDDLAVESFKQVVKDYPSTDEAKQA 701 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 36/102 (35%), Gaps = 19/102 (18%) Query: 59 EVYEK---AVLFLKEQNFSKAYEYFNQCS--RDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 E+Y AV + + A E F R P + +S L +Y +A Sbjct: 28 EIYRTFHAAVDLFDKGAYVAAAEQFRMVEKSRLMPSSQPEFESQLSLLK---ENCQYYEA 84 Query: 114 ASLGE-----------EYITQYPESKNVDYVYYLVGMSYAQM 144 E ++I ++PE+ Y+ +G SY + Sbjct: 85 VCALELGNDDAENMLLKFIKEHPENPFTKVAYFQIGKSYYKQ 126 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 39/127 (30%), Gaps = 15/127 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +AV L+ N A + ++ P + + Y G Y A ++ Sbjct: 81 YYEAVCALELGN-DDAENMLLKFIKEHPENPFTKVAYFQIGKSYYKQGNYILAIVWFDKV 139 Query: 121 I--TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 S N +Y + G +Y K S + + SPY + A Sbjct: 140 QAGEL-SGSANTEY-KFRKGYAYFMT--------GNFKNAQLLFSEVKNK--KSPYTEDA 187 Query: 179 RFYVTVG 185 +Y Sbjct: 188 IYYFAYI 194 >gi|149278745|ref|ZP_01884880.1| hypothetical protein PBAL39_06201 [Pedobacter sp. BAL39] gi|149230364|gb|EDM35748.1| hypothetical protein PBAL39_06201 [Pedobacter sp. BAL39] Length = 1005 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 67/207 (32%), Gaps = 29/207 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A +++ + KA YF + + + L A + Y A + + Sbjct: 518 YALAYAAFEDERYGKAASYFERFLRGNDKDTKTVNDATLRLADAYFVNKSYGNALTNYNK 577 Query: 120 YITQYPESKNV--DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 I +K DY + GM I+ + Q K + M ++++Y NS Y Sbjct: 578 II----ANKGAGEDYALFQRGM-----IQGLEN-QNDAK--INTMQELLQQYPNSNYADD 625 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A E Y +G++ + +++ Y + + A+ + Sbjct: 626 AG--------------FETAYTYFNKGDFDKSRSDLTGLISKYPRSSYVPRALVTIGLVQ 671 Query: 238 VALALMDEAREVVSLIQERYPQGYWAR 264 D A E + Y A+ Sbjct: 672 YNQDQDDAALETFKKVINEYGSSEEAK 698 Score = 62.4 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 76/235 (32%), Gaps = 48/235 (20%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++++ ++ E + + +P + A + +A+ ++ G + ++ S Sbjct: 590 LFQRGMIQGLENQNDAKINTMQELLQQYPNSNYADDAGFETAYTYFNKGDFDKSRSDLTG 649 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I++YP S V +G+ +D L+ +++ Y +S A+ Sbjct: 650 LISKYPRSSYVPRALVTIGLVQYNQDQD--------DAALETFKKVINEYGSSE---EAK 698 Query: 180 FYVTVGRNQLAAKEVE-----------IGRY----------------YLKRGEYVA--AI 210 + +N K IG + YLK A A+ Sbjct: 699 QSLESIKNIYVDKGDSQGFISYAQTTPIGDFSTAEQDNIIFQGANNRYLKGDAQGAFEAV 758 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 + + A H +EA E+ V L DEA + Y W Sbjct: 759 NAY---FDKFPKAIHDKEAKFIRAESLVKLGRPDEA-----IPDYEYILNDWTSD 805 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 71/218 (32%), Gaps = 51/218 (23%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRD--------FPFAGVARKSLLMSAFVQYSAGKYQ 111 +Y KA + + + +A F + + FA A A+ + +Y Sbjct: 478 IYWKAEASYELRKYGEAVSNFEKFLDMPGASNTEVYNFANYA------LAYAAFEDERYG 531 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 +AAS E ++ D + + + N Sbjct: 532 KAASYFERFLR------------------------GNDKDTKTVNDA--TLRLADAYFVN 565 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG-------EYVAAIPRFQLVLANYSDAE 224 Y Y + N+ A ++ + +RG + A I Q +L Y ++ Sbjct: 566 KSYGNALTNYNKIIANKGAGEDYAL----FQRGMIQGLENQNDAKINTMQELLQQYPNSN 621 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 +A++A Y D++R ++ + +YP+ + Sbjct: 622 YADDAGFETAYTYFNKGDFDKSRSDLTGLISKYPRSSY 659 Score = 37.0 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 42/137 (30%), Gaps = 22/137 (16%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 ++K L I +A F + S + Y + L + + A + Sbjct: 1 MHKKYLFIPLFVAGSFTASHAQSSMLVNLNKN----------YLSGLELLDNEKYVAAAQ 50 Query: 79 YFNQCS-----------RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 F + + + + +A G A S + +I +YP + Sbjct: 51 QFRLVEQARQKASTQQESNAELSLLKENAKFYAAVCALELGN-DDAESQFQNFIREYPLN 109 Query: 128 KNVDYVYYLVGMSYAQM 144 N Y+ VG SY Sbjct: 110 ANTKLAYFHVGKSYFAQ 126 >gi|327399142|ref|YP_004340011.1| tol-pal system protein YbgF [Hippea maritima DSM 10411] gi|327181771|gb|AEA33952.1| tol-pal system protein YbgF [Hippea maritima DSM 10411] Length = 261 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 57/139 (41%), Gaps = 8/139 (5%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 + V ++KA+ K++++ A E F +DF + + ++ A Sbjct: 125 KTTTTPPKMQPRVAEDEAAFDKALALFKKKDYGSAIEAFKAFKKDFKDSKLMPDAVFYLA 184 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 ++ G+Y +A + I YP+S + G+++ +M V + Sbjct: 185 ESYFAKGEYDRAIINYDYLINTYPKSSKIAKATLKEGLAFIKMGDKVDGN--------YL 236 Query: 162 MSRIVERYTNSPYVKGARF 180 + ++++++ NS K A+ Sbjct: 237 LQKVIKQFPNSLEAKEAKK 255 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 28/61 (45%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 K+ +Y +AI F+ ++ D++ +A+ L E+Y A D A + YP+ Sbjct: 151 FKKKDYGSAIEAFKAFKKDFKDSKLMPDAVFYLAESYFAKGEYDRAIINYDYLINTYPKS 210 Query: 261 Y 261 Sbjct: 211 S 211 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 15/141 (10%), Positives = 48/141 (34%), Gaps = 22/141 (15%) Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 D + ++ + + ++ + + +S + A Sbjct: 140 DEAAFDKALALFKK--------KDYGSAIEAFKAFKKDFKDSKLMPDAV----------- 180 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 + Y +GEY AI + ++ Y + +A + A++ + + ++ Sbjct: 181 ---FYLAESYFAKGEYDRAIINYDYLINTYPKSSKIAKATLKEGLAFIKMGDKVDGNYLL 237 Query: 251 SLIQERYPQGYWARYVETLVK 271 + +++P A+ + ++K Sbjct: 238 QKVIKQFPNSLEAKEAKKILK 258 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 42/140 (30%), Gaps = 22/140 (15%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + A + Y A + + + +SK + + + SY Sbjct: 142 AAFDKALALFKKKDYGSAIEAFKAFKKDFKDSKLMPDAVFYLAESYFAK--------GEY 193 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + ++ Y S + A + ++ K G Y+ Q Sbjct: 194 DRAIINYDYLINTYPKSSKIAKATLKEGLAFIKMGDK---------VDGNYL-----LQK 239 Query: 216 VLANYSDAEHAEEAMARLVE 235 V+ + ++ A+EA L + Sbjct: 240 VIKQFPNSLEAKEAKKILKK 259 Score = 38.9 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 30/91 (32%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G ++ + D V+ A + + + +A ++ +P + K+ Sbjct: 157 GSAIEAFKAFKKDFKDSKLMPDAVFYLAESYFAKGEYDRAIINYDYLINTYPKSSKIAKA 216 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 L G L ++ I Q+P S Sbjct: 217 TLKEGLAFIKMGDKVDGNYLLQKVIKQFPNS 247 >gi|21232446|ref|NP_638363.1| hypothetical protein XCC3016 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767471|ref|YP_242233.1| hypothetical protein XC_1143 [Xanthomonas campestris pv. campestris str. 8004] gi|188990577|ref|YP_001902587.1| Putative secreted protein [Xanthomonas campestris pv. campestris str. B100] gi|21114227|gb|AAM42287.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572803|gb|AAY48213.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] gi|167732337|emb|CAP50529.1| Putative secreted protein [Xanthomonas campestris pv. campestris] Length = 272 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 8/131 (6%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 +R Y A LK + A + F +P +L Y+ +Q A + Sbjct: 144 EERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEA 203 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + +++YP +G+S ++ Q + ++ +Y S Sbjct: 204 QFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNT--------EAQQTLQQVATQYPGSDAA 255 Query: 176 KGARFYVTVGR 186 + A+ + R Sbjct: 256 RVAQERLQSIR 266 Score = 47.0 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 41/115 (35%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q +E Y N Y A +++ G Y + A +F+ + Sbjct: 163 DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 208 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++ Y + A + +L + EA++ + + +YP AR + ++ Sbjct: 209 VSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQ 263 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 23/58 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 LK G+Y A F L Y + + A+ L E+Y A A + RYP Sbjct: 156 LKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 213 >gi|209523829|ref|ZP_03272382.1| serine/threonine protein kinase with TPR repeats [Arthrospira maxima CS-328] gi|209495861|gb|EDZ96163.1| serine/threonine protein kinase with TPR repeats [Arthrospira maxima CS-328] Length = 754 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 68/206 (33%), Gaps = 32/206 (15%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L IA LVG L V+ + + ++ V L+ + A + F + Sbjct: 333 LWTVVGIAATGLVGLIVIFGLFQVLSRPDPVKSEAAL-KRGVERLEAGDPEAAIKAFTRS 391 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + FP A + A Y KY+QA + + I P + ++ Y+ ++Y Q Sbjct: 392 IQLFPDNSEAFR---KRANAYYDLQKYEQAIADYTQAIKLDPTNPDI---YFNRSLAYHQ 445 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 M R + +++++ + LA + Sbjct: 446 M--------RDFGNAINDLNQVIRLNPEDTDA--------FYQRGLAHY---------SQ 480 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEA 229 Y AAI + V+ + A A Sbjct: 481 ENYEAAILDYTEVIRRQPNNSEAYRA 506 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 49/163 (30%), Gaps = 31/163 (19%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y++ + ++N+ A + + R P A ++ +G Q + E Sbjct: 471 YQRGLAHYSQENYEAAILDYTEVIRRQPNNSEAYRAR---GSAHVKSGNLQAGMADYTEA 527 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I PES YY G + + + L ++++ ++ A Sbjct: 528 IRLNPESAA---AYYNRGRARFHL--------GDYQGALADYNQVISWEPDN-----AEA 571 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 Y Y+ G Y AAI + A Sbjct: 572 YGNRCST------------YINLGNYEAAIESCSRSIQLNPTA 602 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 23/87 (26%), Gaps = 19/87 (21%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ------Y- 105 + Y + ++ A +NQ P +A Y Sbjct: 531 NPESAAAYYNRGRARFHLGDYQGALADYNQVISWEP----------DNAEAYGNRCSTYI 580 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDY 132 + G Y+ A I P +DY Sbjct: 581 NLGNYEAAIESCSRSIQLNPT--AMDY 605 >gi|220904238|ref|YP_002479550.1| tol-pal system protein YbgF [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868537|gb|ACL48872.1| tol-pal system protein YbgF [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 487 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 48/133 (36%), Gaps = 8/133 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 V ++ ++ YE A+ + + F +++P A + Y+ G Sbjct: 359 KPVRPIKGEKAAYEAALKVVMAGRPVEGISRFETFLQEYPQGTYAPNAEYWIGEGLYTQG 418 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 KY++A + + YP+ GM +++ + Q S+++ R Sbjct: 419 KYREALAQFRKVDASYPQHHKNADALLKTGMCLSRL--------GDKEAAGQAYSQLLAR 470 Query: 169 YTNSPYVKGARFY 181 + S + AR Sbjct: 471 FPKSEAARLARTR 483 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 14/107 (13%) Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 ++ Y Y A E IG +G+Y A+ +F+ V A+Y Sbjct: 390 FETFLQEYPQGTYAPNA--------------EYWIGEGLYTQGKYREALAQFRKVDASYP 435 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 +A+ + L + A + S + R+P+ AR T Sbjct: 436 QHHKNADALLKTGMCLSRLGDKEAAGQAYSQLLARFPKSEAARLART 482 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 22/124 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 AG+ + S E ++ +YP+ Y +G Q + L ++ Sbjct: 379 MAGRPVEGISRFETFLQEYPQGTYAPNAEYWIGEGLYT--------QGKYREALAQFRKV 430 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 Y A + ++L KE AA + +LA + +E Sbjct: 431 DASYPQHHKNADALLKTGMCLSRLGDKE--------------AAGQAYSQLLARFPKSEA 476 Query: 226 AEEA 229 A A Sbjct: 477 ARLA 480 >gi|94311605|ref|YP_584815.1| TPR repeat-containing protein [Cupriavidus metallidurans CH34] gi|93355457|gb|ABF09546.1| conserved hypothetical protein; putative exported protein [Cupriavidus metallidurans CH34] Length = 252 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 15/132 (11%), Positives = 47/132 (35%), Gaps = 8/132 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 ++ Y+ A+ + +F A F+ ++ +P + + Y+ Y+ + Sbjct: 129 PTEKPEYDAALKQFQSGDFKGAGNAFSAFAKKYPQSPYLPLAQFWLGNSLYAQRDYKGST 188 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + + + +P ++ ++ Q Q+A + + +V +Y + Sbjct: 189 YVLDTMVKNFPTHPKAPDA--MIAIANNQFESG----QKAA--AKKTLEAVVAKYPGTEG 240 Query: 175 VKGARFYVTVGR 186 + A + + Sbjct: 241 AQAASNRLKTLK 252 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 39/119 (32%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K S ++Y SPY+ A+ N L Y +R Y + Sbjct: 145 GDFKGAGNAFSAFAKKYPQSPYLPLAQ---FWLGNSL----------YAQRD-YKGSTYV 190 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++ N+ A +AM + A++ + + +YP A+ +K Sbjct: 191 LDTMVKNFPTHPKAPDAMIAIANNQFESGQKAAAKKTLEAVVAKYPGTEGAQAASNRLK 249 >gi|187927782|ref|YP_001898269.1| tol-pal system protein YbgF [Ralstonia pickettii 12J] gi|187724672|gb|ACD25837.1| tol-pal system protein YbgF [Ralstonia pickettii 12J] Length = 261 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 41/126 (32%), Gaps = 8/126 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A+ + +F A F+ + +P + + Y+ Y+ ++ + E Sbjct: 144 YDAALKAFQGGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGSSYVLENM 203 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 P+ V Q+A + + +V +Y + K A+ Sbjct: 204 ARSNPQHPKAPDALLQVA------TNQGESGQKAA--ARKTLESVVSQYPGTEQAKTAQS 255 Query: 181 YVTVGR 186 + R Sbjct: 256 RLKSMR 261 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 42/119 (35%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K S V++Y SPY+ A+ N L Y +R Y + Sbjct: 154 GDFKGAGNQFSAFVKKYPQSPYLPLAQ---FWLGNAL----------YAQRD-YKGSSYV 199 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + + + A +A+ ++ AR+ + + +YP A+ ++ +K Sbjct: 200 LENMARSNPQHPKAPDALLQVATNQGESGQKAAARKTLESVVSQYPGTEQAKTAQSRLK 258 >gi|262193342|ref|YP_003264551.1| hypothetical protein Hoch_0016 [Haliangium ochraceum DSM 14365] gi|262076689|gb|ACY12658.1| conserved hypothetical protein [Haliangium ochraceum DSM 14365] Length = 293 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 41/140 (29%), Gaps = 8/140 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 E+Y + + ++ A Q +P A + Y Sbjct: 154 QAAKPPSPDELYSQGRAAFERGDYGGAQTLLRQLVTQYPSDTRADDAQYYRGEAYYREQD 213 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y A ++ +Y +S D + G + AQ +R Y + ++Y Sbjct: 214 YGAAIREFQKVFDKYEDSSLADDALFRAGEA-AQTLRRCS-------EARAYFGVLRQKY 265 Query: 170 TNSPYVKGARFYVTVGRNQL 189 S V ++ + L Sbjct: 266 PRSNLVNKSKSKDQELKRDL 285 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + ++V +Y + A+ G Y + +Y AAI FQ V Sbjct: 180 AQTLLRQLVTQYPSDTRADDAQ--------------YYRGEAYYREQDYGAAIREFQKVF 225 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y D+ A++A+ R EA L EAR +++++YP+ Sbjct: 226 DKYEDSSLADDALFRAGEAAQTLRRCSEARAYFGVLRQKYPRSN 269 Score = 39.3 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 12/101 (11%) Query: 178 ARFYVTVGRNQLAAKEVEIGR------YY------LKRGEYVAAIPRFQLVLANYSDAEH 225 + + +LA EV+ + Y +RG+Y A + ++ Y Sbjct: 137 VEERLILLEERLAKLEVQAAKPPSPDELYSQGRAAFERGDYGGAQTLLRQLVTQYPSDTR 196 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 A++A EAY A + ++Y A Sbjct: 197 ADDAQYYRGEAYYREQDYGAAIREFQKVFDKYEDSSLADDA 237 >gi|241662343|ref|YP_002980703.1| tol-pal system protein YbgF [Ralstonia pickettii 12D] gi|309780842|ref|ZP_07675583.1| tol-pal system protein YbgF [Ralstonia sp. 5_7_47FAA] gi|240864370|gb|ACS62031.1| tol-pal system protein YbgF [Ralstonia pickettii 12D] gi|308920524|gb|EFP66180.1| tol-pal system protein YbgF [Ralstonia sp. 5_7_47FAA] Length = 261 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 41/126 (32%), Gaps = 8/126 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A+ + +F A F+ + +P + + Y+ Y+ ++ + E Sbjct: 144 YDAALKAFQGGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGSSYVLENM 203 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 P+ V Q+A + + +V +Y + K A+ Sbjct: 204 ARSNPQHPKAPDALLQVA------TNQGESGQKAA--ARKTLESVVSQYPGTEQAKTAQS 255 Query: 181 YVTVGR 186 + R Sbjct: 256 RLKSMR 261 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 42/119 (35%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K S V++Y SPY+ A+ N L Y +R Y + Sbjct: 154 GDFKGAGNQFSAFVKKYPQSPYLPLAQ---FWLGNAL----------YAQRD-YKGSSYV 199 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + + + A +A+ ++ AR+ + + +YP A+ ++ +K Sbjct: 200 LENMARSNPQHPKAPDALLQVATNQGESGQKAAARKTLESVVSQYPGTEQAKTAQSRLK 258 >gi|15639360|ref|NP_218809.1| hypothetical protein TP0369 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025602|ref|YP_001933374.1| hypothetical protein TPASS_0369 [Treponema pallidum subsp. pallidum SS14] gi|14285869|sp|O83384|Y369_TREPA RecName: Full=Uncharacterized protein TP_0369; Flags: Precursor gi|3322653|gb|AAC65360.1| predicted coding region TP0369 [Treponema pallidum subsp. pallidum str. Nichols] gi|189018177|gb|ACD70795.1| hypothetical protein TPASS_0369 [Treponema pallidum subsp. pallidum SS14] Length = 516 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 5/83 (6%) Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 G + A + ++ Q+P + +D ++L G +Y ++ QR +L L+ I+ Sbjct: 435 QGNARDALASLGDFFAQFPSHERMDEAWFLRGQAY-----EINGAQRNVRLALEAYKTIL 489 Query: 167 ERYTNSPYVKGARFYVTVGRNQL 189 ER+ +SPY K A +N Sbjct: 490 ERFPHSPYWKKADERARFIKNFF 512 >gi|322418106|ref|YP_004197329.1| tol-pal system protein YbgF [Geobacter sp. M18] gi|320124493|gb|ADW12053.1| tol-pal system protein YbgF [Geobacter sp. M18] Length = 283 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 8/146 (5%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G + + + ++ +Y++ K +KA E+F P +A Sbjct: 142 LGTLEKGVAEQQKKAADLLKSPEALYQQGYDAFKAGQGAKAREFFASFLLQHPKHSLAAN 201 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + Y+ Y+QA +E I YP+ GM++ + + Sbjct: 202 AQYWIGESYYAEKNYEQAVLEFQEVIKTYPDKDKAPAAMLKQGMAF--------RELGDS 253 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFY 181 K M ++VE + S K A+ Sbjct: 254 KSANYIMKKLVEEHPKSEEAKIAKEK 279 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 45/138 (32%), Gaps = 22/138 (15%) Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 Y G + + ++ + + ++ A+++ Sbjct: 163 PEALYQQGYDAFKAGQGA--------KAREFFASFLLQHPKHSLAANAQYW--------- 205 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 IG Y Y A+ FQ V+ Y D + A AM + A+ L A ++ Sbjct: 206 -----IGESYYAEKNYEQAVLEFQEVIKTYPDKDKAPAAMLKQGMAFRELGDSKSANYIM 260 Query: 251 SLIQERYPQGYWARYVET 268 + E +P+ A+ + Sbjct: 261 KKLVEEHPKSEEAKIAKE 278 >gi|171912815|ref|ZP_02928285.1| hypothetical protein VspiD_16585 [Verrucomicrobium spinosum DSM 4136] Length = 463 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 6/161 (3%) Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + + ++ P+ A + V G A + + + YP +K + Sbjct: 167 VKMYEGVIKNSPYGKYAPYAQFAIGEVYQDDGDKPMANASYQAVVENYPNTKLASEAQFR 226 Query: 137 VGMSYAQMIRDVPYDQ--RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 +G + R Q AT+ L+ + A + + + + Sbjct: 227 IGAISSAAARKTQDAQNLTATRDALETYKMAN---PSGERTSEAESLIQEVNTSQSYRSL 283 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 EIG++Y K G+ AA + + + + A +A RL Sbjct: 284 EIGKFYEKAGKPKAAAIYYNEAIK-FGAPDAAADARTRLAN 323 Score = 50.1 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 84/256 (32%), Gaps = 48/256 (18%) Query: 42 SSRDVYLDSVTDVRYQRE----VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 S++ + SV++ + Q + A N +A + + F A ++ Sbjct: 39 KSKEDAVPSVSEKQSQEAAADAMLRDARTASSTGNAGRAQSIYKDVVARYKFTDAAAEAQ 98 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + + GK Q A +++I Y +S Q ++ + +A K Sbjct: 99 FELSRGLRATGKLQDAYEGFQKFIDNYRQSPRFSEAL--------QQQFEIAEEAKAGKK 150 Query: 158 MLQYM--------SRIVERY-------TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + S +V+ Y Y A+ IG Y Sbjct: 151 QPSLLLIPMKLDKSELVKMYEGVIKNSPYGKYAPYAQ--------------FAIGEVYQD 196 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARL-VEAYVALALMDEAR------EVVSLIQE 255 G+ A +Q V+ NY + + A EA R+ + A +A+ + + + Sbjct: 197 DGDKPMANASYQAVVENYPNTKLASEAQFRIGAISSAAARKTQDAQNLTATRDALETYKM 256 Query: 256 RYPQGYWARYVETLVK 271 P G E+L++ Sbjct: 257 ANPSGERTSEAESLIQ 272 >gi|238752129|ref|ZP_04613612.1| hypothetical protein yrohd0001_570 [Yersinia rohdei ATCC 43380] gi|238709706|gb|EEQ01941.1| hypothetical protein yrohd0001_570 [Yersinia rohdei ATCC 43380] Length = 269 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 48/126 (38%), Gaps = 9/126 (7%) Query: 61 YEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y AV L+++ + +A F + +P + + + Y+ GK AA Sbjct: 152 YNAAVSLALEKKQYDQAITAFQSFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAV 211 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ + +++++Y + K A+ Sbjct: 212 VVKNYPKSPKSSEAMFKVGV--------IMQDKGQSDKAKAVYQQVIKQYPTTDAAKQAQ 263 Query: 180 FYVTVG 185 ++ Sbjct: 264 KRLSAL 269 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 14/129 (10%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S + +++ + V++Y S Y A +++ G+ Sbjct: 150 SDYNAAVSLALEKKQYDQAITAFQSFVKQYPKSTYQPNANYWL--------------GQL 195 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y +G+ A + +V+ NY + + EAM ++ D+A+ V + ++YP Sbjct: 196 YYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPT 255 Query: 260 GYWARYVET 268 A+ + Sbjct: 256 TDAAKQAQK 264 >gi|21243866|ref|NP_643448.1| hypothetical protein XAC3140 [Xanthomonas axonopodis pv. citri str. 306] gi|21109467|gb|AAM37984.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 272 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 8/130 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +R Y A LK + A + F +P +L Y+ +Q A + Sbjct: 145 ERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQ 204 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + +++YP +G+S ++ Q + ++ +Y S + Sbjct: 205 FRDLVSRYPTHDKAAGGLLKLGLSQYGEGKN--------NEAQQTLQQVASQYPGSDAAR 256 Query: 177 GARFYVTVGR 186 A+ + R Sbjct: 257 VAQERLQSIR 266 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q +E Y N Y A +++ G Y + A +F+ + Sbjct: 163 DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 208 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++ Y + A + +L + +EA++ + + +YP AR + ++ Sbjct: 209 VSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQQTLQQVASQYPGSDAARVAQERLQ 263 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 23/58 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 LK G+Y A F L Y + + A+ L E+Y A A + RYP Sbjct: 156 LKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 213 >gi|78048826|ref|YP_365001.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|294665413|ref|ZP_06730701.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|78037256|emb|CAJ25001.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|292604824|gb|EFF48187.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 272 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 8/130 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +R Y A LK + A + F +P +L Y+ +Q A + Sbjct: 145 ERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQ 204 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + +++YP +G+S ++ Q + ++ +Y S + Sbjct: 205 FRDLVSRYPTHDKAAGGLLKLGLSQYGEGKN--------NEAQQTLQQVASQYPGSDAAR 256 Query: 177 GARFYVTVGR 186 A+ + R Sbjct: 257 VAQERLQSIR 266 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q +E Y N Y A +++ G Y + A +F+ + Sbjct: 163 DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 208 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++ Y + A + +L + +EA++ + + +YP AR + ++ Sbjct: 209 VSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQQTLQQVASQYPGSDAARVAQERLQ 263 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 23/58 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 LK G+Y A F L Y + + A+ L E+Y A A + RYP Sbjct: 156 LKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 213 >gi|325929355|ref|ZP_08190485.1| tol-pal system protein YbgF [Xanthomonas perforans 91-118] gi|325540267|gb|EGD11879.1| tol-pal system protein YbgF [Xanthomonas perforans 91-118] Length = 242 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 8/130 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +R Y A LK + A + F +P +L Y+ +Q A + Sbjct: 115 ERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQ 174 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + +++YP +G+S ++ Q + ++ +Y S + Sbjct: 175 FRDLVSRYPTHDKAAGGLLKLGLSQYGEGKN--------NEAQQTLQQVASQYPGSDAAR 226 Query: 177 GARFYVTVGR 186 A+ + R Sbjct: 227 VAQERLQSIR 236 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q +E Y N Y A +++ G Y + A +F+ + Sbjct: 133 DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 178 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++ Y + A + +L + +EA++ + + +YP AR + ++ Sbjct: 179 VSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQQTLQQVASQYPGSDAARVAQERLQ 233 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 23/58 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 LK G+Y A F L Y + + A+ L E+Y A A + RYP Sbjct: 126 LKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 183 >gi|294626854|ref|ZP_06705446.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598868|gb|EFF43013.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 272 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 8/130 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +R Y A LK + A + F +P +L Y+ +Q A + Sbjct: 145 ERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQ 204 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + +++YP +G+S ++ Q + ++ +Y S + Sbjct: 205 FRDLVSRYPTHDKAAGGLLKLGLSQYGEGKN--------NEAQQTLQQVASQYPGSDAAR 256 Query: 177 GARFYVTVGR 186 A+ + R Sbjct: 257 VAQERLQSIR 266 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q +E Y N Y A +++ G Y + A +F+ + Sbjct: 163 DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 208 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++ Y + A + +L + +EA++ + + +YP AR + ++ Sbjct: 209 VSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQQTLQQVASQYPGSDAARVAQERLQ 263 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 23/58 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 LK G+Y A F L Y + + A+ L E+Y A A + RYP Sbjct: 156 LKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 213 >gi|304395721|ref|ZP_07377604.1| tol-pal system protein YbgF [Pantoea sp. aB] gi|304357015|gb|EFM21379.1| tol-pal system protein YbgF [Pantoea sp. aB] Length = 264 Score = 65.5 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 47/134 (35%), Gaps = 9/134 (6%) Query: 50 SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + Y AV L+++ + +A + +P + + + Y+ G Sbjct: 136 APAQTGDANSDYNAAVALILEKKQYDQAISALQAWVKRYPDSTYQPNANYWLGQLNYNKG 195 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 K AA + YP+S VG+ + +++ T ++++ Sbjct: 196 KKDDAAYYYATVVKNYPKSPKAAEALLKVGV--------IMQEKKDTAKAKAVFQQVIKL 247 Query: 169 YTNSPYVKGARFYV 182 Y ++ K A+ + Sbjct: 248 YPDTESAKQAQKRL 261 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 45/126 (35%), Gaps = 22/126 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y QA S + ++ +YP+S Y +G + Y + +V+ Sbjct: 158 KQYDQAISALQAWVKRYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYYATVVK 209 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SP A V V ++ + A FQ V+ Y D E A+ Sbjct: 210 NYPKSPKAAEALLKVGVIMQ--------------EKKDTAKAKAVFQQVIKLYPDTESAK 255 Query: 228 EAMARL 233 +A RL Sbjct: 256 QAQKRL 261 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 S + +++ + + V+RY +S Y A +++ Sbjct: 143 ANSDYNAAVALILEKKQYDQAISALQAWVKRYPDSTYQPNANYWLGQLN----------- 191 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A + V+ NY + A EA+ ++ +A+ V + + Y Sbjct: 192 ---YNKGKKDDAAYYYATVVKNYPKSPKAAEALLKVGVIMQEKKDTAKAKAVFQQVIKLY 248 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 249 PDTESAKQAQK 259 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ +Y AI Q + Y D+ + A L + D+A + + + YP+ Sbjct: 155 LEKKQYDQAISALQAWVKRYPDSTYQPNANYWLGQLNYNKGKKDDAAYYYATVVKNYPKS 214 Query: 261 YWARYVETLVK 271 + E L+K Sbjct: 215 --PKAAEALLK 223 >gi|78358000|ref|YP_389449.1| TPR repeat-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220405|gb|ABB39754.1| TPR repeat [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 1154 Score = 65.5 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 78/223 (34%), Gaps = 33/223 (14%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSA 101 D + V E+ +A + + A E + R P + + L + + Sbjct: 485 DEDGNPVDPPPTSAELLFRAKAAMNNGDQQTALETLEELRRRNDLEP--ELQEEMLYLLS 542 Query: 102 FVQYSAGK------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 V YS GK Y S E + S+ + +G+ ++ Sbjct: 543 DVLYSRGKDDLLASYDTITSALTEAMNYNLSSERIPGALLRMGLINLKI--------GNI 594 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + Y + + + + + + G ++ +G+Y A +FQ Sbjct: 595 REAEAYFNILKREHPDDENIP-----LIY---------YYWGDHFFNKGQYQKAADQFQF 640 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 V+ N+ D+ E+ L A L D+A ++V I++R+P Sbjct: 641 VVQNHPDSRFVRESSVGLARALYRLGYYDQAYQIVDYIEKRWP 683 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 21/185 (11%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 D Y F + + KA + F ++ P + R+S + A Y G Y Sbjct: 609 PDDENIPLIYYYWGDHFFNKGQYQKAADQFQFVVQNHPDSRFVRESSVGLARALYRLGYY 668 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 QA + + ++P YV Y + M+ DV Y + + + Sbjct: 669 DQAYQIVDYIEKRWPRF----YVEY---PPFLNMMGDVSYRMQKYEKARIHYWTYYNIDP 721 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 + + G YL++ + AA ++ + D + ++ Sbjct: 722 DGEEADLILARL--------------GDIYLRQDKTDAAREVYEEAARKFPDRDGGLISL 767 Query: 231 ARLVE 235 RL E Sbjct: 768 MRLAE 772 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 76/226 (33%), Gaps = 33/226 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + L ++ + + +LL + G ++A + Sbjct: 545 LYSRGKDDLLA-SYDTITSALTEAMNYNLSSERIPGALLRMGLINLKIGNIREAEAYFNI 603 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 ++P+ +N+ +YY G D +++ + +V+ + +S +V+ + Sbjct: 604 LKREHPDDENIPLIYYYWG--------DHFFNKGQYQKAADQFQFVVQNHPDSRFVRESS 655 Query: 180 FYVTVGRNQLAAKE--VEIG--------RYY--------------LKRGEYVAAIPRFQL 215 + +L + +I R+Y + +Y A + Sbjct: 656 VGLARALYRLGYYDQAYQIVDYIEKRWPRFYVEYPPFLNMMGDVSYRMQKYEKARIHYWT 715 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 D E A+ +ARL + Y+ D AREV ++P Sbjct: 716 YYNIDPDGEEADLILARLGDIYLRQDKTDAAREVYEEAARKFPDRD 761 Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 7/54 (12%), Positives = 22/54 (40%) Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 + + + P + +A + + A +Y +A + ++ +YP + + Sbjct: 800 YLKIINEHPQSDLAPLAQVKLAMWYLWNRQYPEAMAAATDFAEKYPAGELLPRA 853 >gi|299067717|emb|CBJ38926.1| putative associated to Tol-Pal complex protein (ygcF) [Ralstonia solanacearum CMR15] Length = 257 Score = 65.5 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 40/132 (30%), Gaps = 8/132 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 ++ Y+ A+ + +F A F+ + +P + + Y+ Y+ + Sbjct: 134 PGEQTEYDAALKTFQSGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGST 193 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + E P+ V Q+A + + ++ Y + Sbjct: 194 YVLENMARANPQHPKAPEALLQVA------TNQGESGQKAA--ARKTLESVIAEYPGTEQ 245 Query: 175 VKGARFYVTVGR 186 K A + R Sbjct: 246 AKTATSRLKTMR 257 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K S V++Y SPY+ A+ N L Y +R Y + Sbjct: 150 GDFKGAGNQFSAFVKKYPQSPYLPLAQ---FWLGNAL----------YAQRD-YKGSTYV 195 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + + A EA+ ++ AR+ + + YP A+ + +K Sbjct: 196 LENMARANPQHPKAPEALLQVATNQGESGQKAAARKTLESVIAEYPGTEQAKTATSRLK 254 >gi|317047359|ref|YP_004115007.1| tol-pal system protein YbgF [Pantoea sp. At-9b] gi|316948976|gb|ADU68451.1| tol-pal system protein YbgF [Pantoea sp. At-9b] Length = 269 Score = 65.5 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 51/144 (35%), Gaps = 9/144 (6%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 S D + T Y AV L+++ + +A + +P + + Sbjct: 134 SSDSAAAAPTQSGDANSDYNAAVALILEKKQYDQAITALQAWVKRYPDSTYQPNANYWLG 193 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + Y+ GK AA + YP+S + VG+ + ++ T Sbjct: 194 QLFYNKGKKDDAAYYFATVVKNYPKSPKAAEALFKVGV--------IMQEKNDTAKAKAV 245 Query: 162 MSRIVERYTNSPYVKGARFYVTVG 185 ++++++ NS K A+ + Sbjct: 246 YQQVIKQFPNSESAKLAQKRLAGL 269 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 48/131 (36%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 S + +++ + + V+RY +S Y A +++ Sbjct: 148 ANSDYNAAVALILEKKQYDQAITALQAWVKRYPDSTYQPNANYWLGQL------------ 195 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +Y K + AA F V+ NY + A EA+ ++ +A+ V + +++ Sbjct: 196 -FYNKGKKDDAA-YYFATVVKNYPKSPKAAEALFKVGVIMQEKNDTAKAKAVYQQVIKQF 253 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 254 PNSESAKLAQK 264 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 22/127 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y QA + + ++ +YP+S Y +G + + Y + +V+ Sbjct: 163 KQYDQAITALQAWVKRYPDSTYQPNANYWLGQLFYNKGKKDD--------AAYYFATVVK 214 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SP A F V V ++ + A +Q V+ + ++E A+ Sbjct: 215 NYPKSPKAAEALFKVGVIMQ--------------EKNDTAKAKAVYQQVIKQFPNSESAK 260 Query: 228 EAMARLV 234 A RL Sbjct: 261 LAQKRLA 267 Score = 39.7 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ +Y AI Q + Y D+ + A L + + D+A + + + YP+ Sbjct: 160 LEKKQYDQAITALQAWVKRYPDSTYQPNANYWLGQLFYNKGKKDDAAYYFATVVKNYPKS 219 Query: 261 YWARYVETLVK 271 + E L K Sbjct: 220 --PKAAEALFK 228 >gi|238797728|ref|ZP_04641222.1| hypothetical protein ymoll0001_12360 [Yersinia mollaretii ATCC 43969] gi|238718369|gb|EEQ10191.1| hypothetical protein ymoll0001_12360 [Yersinia mollaretii ATCC 43969] Length = 257 Score = 65.1 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 49/126 (38%), Gaps = 9/126 (7%) Query: 61 YEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y AV L+++ + +A F + +P + + + Y+ GK AA Sbjct: 140 YNAAVSLALEKKQYDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAV 199 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ + +++++Y N+ K A+ Sbjct: 200 VVKNYPKSPKSSEAMFKVGV--------IMQDKGQSDKAKAVYQQVIKQYPNTDAAKQAQ 251 Query: 180 FYVTVG 185 ++ Sbjct: 252 KRLSAL 257 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 14/129 (10%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S + +++ + V++Y S Y A +++ G+ Sbjct: 138 SDYNAAVSLALEKKQYDQAITAFQGFVKQYPKSTYQPNANYWL--------------GQL 183 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y +G+ A + +V+ NY + + EAM ++ D+A+ V + ++YP Sbjct: 184 YYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPN 243 Query: 260 GYWARYVET 268 A+ + Sbjct: 244 TDAAKQAQK 252 >gi|238785871|ref|ZP_04629839.1| hypothetical protein yberc0001_38270 [Yersinia bercovieri ATCC 43970] gi|238713241|gb|EEQ05285.1| hypothetical protein yberc0001_38270 [Yersinia bercovieri ATCC 43970] Length = 260 Score = 65.1 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 49/126 (38%), Gaps = 9/126 (7%) Query: 61 YEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y AV L+++ + +A F + +P + + + Y+ GK AA Sbjct: 143 YNAAVSLALEKKQYDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAV 202 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ + +++++Y N+ K A+ Sbjct: 203 VVKNYPKSPKSSEAMFKVGV--------IMQDKGQSDKAKAVYQQVIKQYPNTDAAKQAQ 254 Query: 180 FYVTVG 185 ++ Sbjct: 255 KRLSAL 260 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 14/129 (10%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S + +++ + V++Y S Y A +++ G+ Sbjct: 141 SDYNAAVSLALEKKQYDQAITAFQGFVKQYPKSTYQPNANYWL--------------GQL 186 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y +G+ A + +V+ NY + + EAM ++ D+A+ V + ++YP Sbjct: 187 YYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPN 246 Query: 260 GYWARYVET 268 A+ + Sbjct: 247 TDAAKQAQK 255 >gi|91781921|ref|YP_557127.1| putative transmembrane protein [Burkholderia xenovorans LB400] gi|91685875|gb|ABE29075.1| Putative transmembrane protein [Burkholderia xenovorans LB400] Length = 249 Score = 65.1 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 50/132 (37%), Gaps = 8/132 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + E + A + +F A F FP + + Y+ Y+ + Sbjct: 126 PGETESFNAASQQFRNGDFKNAAASFRTFISRFPNSPYQPTAQYWLGNALYALRDYKGST 185 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 ++ + + YP+ L+ ++ Q+ + Q+A + + +IV +Y+ S Sbjct: 186 AIWQGVVKNYPQHPRAPEA--LLAIANNQLEQG----QKAA--ARKTLEQIVAQYSGSDV 237 Query: 175 VKGARFYVTVGR 186 + A+ ++ + Sbjct: 238 AQSAQSKLSQIK 249 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 37/109 (33%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + R+ NSPY A++++ + R +Y + Sbjct: 142 GDFKNAAASFRTFISRFPNSPYQPTAQYWL--------GNALYALR------DYKGSTAI 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q V+ NY A EA+ + + AR+ + I +Y Sbjct: 188 WQGVVKNYPQHPRAPEALLAIANNQLEQGQKAAARKTLEQIVAQYSGSD 236 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 52/132 (39%), Gaps = 22/132 (16%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Q+ G ++ AA+ +I+++P S Y +G + + R K Sbjct: 138 QFRNGDFKNAAASFRTFISRFPNSPYQPTAQYWLGNALYAL--------RDYKGSTAIWQ 189 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 +V+ Y P A + I L++G+ AA + ++A YS + Sbjct: 190 GVVKNYPQHPRAPEAL--------------LAIANNQLEQGQKAAARKTLEQIVAQYSGS 235 Query: 224 EHAEEAMARLVE 235 + A+ A ++L + Sbjct: 236 DVAQSAQSKLSQ 247 >gi|289661911|ref|ZP_06483492.1| tol-pal system protein YbgF [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667002|ref|ZP_06488077.1| tol-pal system protein YbgF [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 272 Score = 65.1 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 8/130 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +R Y A LK + A + F +P +L Y+ +Q A + Sbjct: 145 ERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQ 204 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + +++YP +G+S ++ Q + ++ +Y S + Sbjct: 205 FRDLVSRYPTHDKAAGGLLKLGLSQYGEGKN--------NEAQQTLQQVASQYPGSDAAR 256 Query: 177 GARFYVTVGR 186 A+ + R Sbjct: 257 VAQERLQSIR 266 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q +E Y N Y A +++ G Y + A +F+ + Sbjct: 163 DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 208 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++ Y + A + +L + +EA++ + + +YP AR + ++ Sbjct: 209 VSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQQTLQQVASQYPGSDAARVAQERLQ 263 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 23/58 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 LK G+Y A F L Y + + A+ L E+Y A A + RYP Sbjct: 156 LKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 213 >gi|302343855|ref|YP_003808384.1| tol-pal system protein YbgF [Desulfarculus baarsii DSM 2075] gi|301640468|gb|ADK85790.1| tol-pal system protein YbgF [Desulfarculus baarsii DSM 2075] Length = 285 Score = 65.1 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 52/143 (36%), Gaps = 8/143 (5%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 + + +E Y A+ ++++F A + F + +D P A + Sbjct: 150 EKTGPSSAAPAKLSDKERYNLALRLYEQKSFDAARDRFEELLKDKPDGAYAASAQFWVGE 209 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 YS ++++A + I +Y ++ G++++ + + + Sbjct: 210 CYYSQKRFEEAILAYNQVIKRYAKNAKAPAAMLKQGLAFSAL--------GDKRTAKIVL 261 Query: 163 SRIVERYTNSPYVKGARFYVTVG 185 +++V Y S A+ Y+ Sbjct: 262 NKLVNTYPKSSQAGLAKKYLAKM 284 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 41/112 (36%), Gaps = 14/112 (12%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 Y+Q++ +++ + Y A+ +G Y + + A Sbjct: 175 YEQKSFDAARDRFEELLKDKPDGAYAASAQ--------------FWVGECYYSQKRFEEA 220 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 I + V+ Y+ A AM + A+ AL A+ V++ + YP+ Sbjct: 221 ILAYNQVIKRYAKNAKAPAAMLKQGLAFSALGDKRTAKIVLNKLVNTYPKSS 272 >gi|197119964|ref|YP_002140391.1| lipoprotein [Geobacter bemidjiensis Bem] gi|197089324|gb|ACH40595.1| lipoprotein, putative [Geobacter bemidjiensis Bem] Length = 304 Score = 65.1 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 35/73 (47%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A+ +LK + + A E F + +P RK+L M ++ Y A + +E+ Sbjct: 69 YKIALSYLKGEKWGAAVEKFRTLAGRYPEEETGRKALFMVGESYFAKKDYAAALAAYQEF 128 Query: 121 ITQYPESKNVDYV 133 I++YP+ D Sbjct: 129 ISRYPQETQADEA 141 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 22/141 (15%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + G Y +A S E + +P Y + +SY + + ++ Sbjct: 39 FDEGDYYRAISEYERVLYFFPAEPAAKAAQYKIALSYLKGEK--------WGAAVEKFRT 90 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + RY + A +G Y + +Y AA+ +Q ++ Y Sbjct: 91 LAGRYPEEETGRKAL--------------FMVGESYFAKKDYAAALAAYQEFISRYPQET 136 Query: 225 HAEEAMARLVEAYVALALMDE 245 A+EA ++ Y+ ++ Sbjct: 137 QADEARMKMGWCYLLQGQWEQ 157 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 48/160 (30%), Gaps = 19/160 (11%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 AV ++ ++ + + + + E ++ +A + + FP Sbjct: 5 IAAVLLILACSVGAT----FAAPLQLTAESAL-SFGDHLFDEGDYYRAISEYERVLYFFP 59 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMI 145 A+ + A K+ + E++ T YPE + ++VG SY Sbjct: 60 AEPAAKAAQYKIALSYLKGEKW---GAAVEKFRTLAGRYPEEETGRKALFMVGESYFAK- 115 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + L + RY AR + Sbjct: 116 -------KDYAAALAAYQEFISRYPQETQADEARMKMGWC 148 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 14/110 (12%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 +D+ + R++ + P K A++ + + YLK ++ AA Sbjct: 39 FDEGDYYRAISEYERVLYFFPAEPAAKAAQYKIALS--------------YLKGEKWGAA 84 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + +F+ + Y + E +A+ + E+Y A A RYPQ Sbjct: 85 VEKFRTLAGRYPEEETGRKALFMVGESYFAKKDYAAALAAYQEFISRYPQ 134 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 6/66 (9%), Positives = 27/66 (40%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + ++ ++ + +++++ A + + +P A ++ + + G++ Sbjct: 96 PEEETGRKALFMVGESYFAKKDYAAALAAYQEFISRYPQETQADEARMKMGWCYLLQGQW 155 Query: 111 QQAASL 116 +Q A Sbjct: 156 EQGAGA 161 >gi|283780651|ref|YP_003371406.1| hypothetical protein Psta_2881 [Pirellula staleyi DSM 6068] gi|283439104|gb|ADB17546.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068] Length = 1076 Score = 65.1 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 30/257 (11%), Positives = 80/257 (31%), Gaps = 31/257 (12%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 +F + + R+ + A F F A + + Sbjct: 11 VVFLLAGMLAGGALSFTTVAQAQEKPAESPPAARQKFVDAGNFQNNGAFDLAVDEWQAFL 70 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + +P +A K+ K ++A + E+ + YP+ + ++ + +G + Sbjct: 71 KAYPTDPLAGKARYYLGVCLLQQKKPEEALAAFEKVLADYPKFEQMEDLLVNLGSCQYSL 130 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + +++ + + S +V+ + +Y Sbjct: 131 GQAGK--AEMFGKAATSYAKLAKDFPKSKFVEESL-------------------FYQGES 169 Query: 205 EYVA-----AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y A ++ ++ ++ ++ + EE + L L + A + + +P+ Sbjct: 170 LYSAGKKGESLAPYEQLIKDFPKSTRREETLYALGCTQEELGKYEPALATFETLLKEFPE 229 Query: 260 GYWA-----RYVETLVK 271 A R E L++ Sbjct: 230 SKLATEVTMRKAEALLQ 246 Score = 52.8 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 60/221 (27%), Gaps = 37/221 (16%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 S+ G + D R + +Y + + A F ++FP Sbjct: 169 SLYSAGKKGESLAPYEQLIKDFPKSTRREETLYALGCTQEELGKYEPALATFETLLKEFP 228 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQA------ASLGEEYITQYPESKNVDYVYYLVGMSYA 142 + +A + + A G A + + + DY G + A Sbjct: 229 ESKLATEVTMRKAEALLQKGDLAAAEKLFGEVAAVKGF-------SQADYALLRQGTALA 281 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + + + ++V + +S YV A + RY+ + Sbjct: 282 KQEKFP--------EAAAVLVKLVTDFGSSAYVADAT--------------LGAARYFYR 319 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 A + V+ A EA L Y+ Sbjct: 320 ANNDAEAETWLKKVVEA--KTPAAAEAAHWLARLYIKTGKP 358 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 27/230 (11%), Positives = 68/230 (29%), Gaps = 24/230 (10%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + + + + D + + Y + +F+ + ++ +P + A +L Sbjct: 584 AKSTLQKLMTDFASSTVLDQAHYRMGEILYAANDFAGSATEYSVVVTKYPESPFAPYALY 643 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 + + ++ +A I ++ + V Y ++ Sbjct: 644 GQGWSLLKSKEFAKAVESFTSVIDKHASHELVADSQYGRAVA--------RRQAGDAAGS 695 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQ-LAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 L +++ + LA + +Y A+ F +L Sbjct: 696 LADFDAYLKK----ELTPD--QKCDALYERGLAQ----VA-----IMKYADAVASFDELL 740 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 + A++ + L A +L EA + I + YP+ A Sbjct: 741 KVNAKYSAADKVLYELAWAQKSLDKHAEAVPLFEKIAKDYPESPLAAEAW 790 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 21/203 (10%), Positives = 56/203 (27%), Gaps = 21/203 (10%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + D + +++ + A + + + P + + + Sbjct: 774 EKIAKDYPESPLAAEAWFRVGEDQYEKKTYDVAVKSYTEAMGKKPAGELGEMTSYKLGWA 833 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + +YQ A + +P ++ +M D Sbjct: 834 NFQLKQYQPALDSFSSQVKDHPAGPLSADGIFMKAECLFRMENY--KDAYPAYEAAS--- 888 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 + + +T+ +A ++ ++ A+ + A ++D+ Sbjct: 889 -------KTKFSSPTYEMLTLLHGGQSAAQLS---------KWDDALKLLSQIPAKFADS 932 Query: 224 EHAEEAMARLVEAYVALALMDEA 246 EA + A L +DEA Sbjct: 933 PLLPEATYEIGWAKQNLGKLDEA 955 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 28/199 (14%), Positives = 68/199 (34%), Gaps = 24/199 (12%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC-SRDFPFAGVARKSLLMSAFVQYSA 107 +T + +YE+ + + ++ A F++ + ++ A K L A+ Q S Sbjct: 705 KELTPDQKCDALYERGLAQVAIMKYADAVASFDELLKVNAKYSA-ADKVLYELAWAQKSL 763 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K+ +A L E+ YPES ++ VG + + + ++ + + Sbjct: 764 DKHAEAVPLFEKIAKDYPESPLAAEAWFRVGEDQYEK--------KTYDVAVKSYTEAMG 815 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 + + + + QL +Y A+ F + ++ + Sbjct: 816 KKPAGELGEMTSYKLGWANFQL--------------KQYQPALDSFSSQVKDHPAGPLSA 861 Query: 228 EAMARLVEAYVALALMDEA 246 + + E + +A Sbjct: 862 DGIFMKAECLFRMENYKDA 880 Score = 38.9 bits (90), Expect = 0.78, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 78/255 (30%), Gaps = 59/255 (23%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D + + +Y A L + F +A ++ + + A + + ++A G Sbjct: 409 DHASHEQAPLALYSAAFTALDLKKFDEALKHAADFEKAYATAPLLPDTKYVAAEANLQLG 468 Query: 109 KYQQAASLG----EEY----------ITQ---------Y--------PE------SKNVD 131 K +A + E++ I Y P+ + V Sbjct: 469 KLPEAEAAYRELVEKFASHAEADTWKIRLARTLLLEKKYDDLVTTVTPQITTLKKHELVA 528 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 ++LVG + + K ++ + Sbjct: 529 EAHFLVGSAQFFADK--------FKEAETSLNASLAADPKWRQADETM------------ 568 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 + + R K + AA Q ++ +++ + ++A R+ E A + S Sbjct: 569 --LLVARTQRKLDQVDAAKSTLQKLMTDFASSTVLDQAHYRMGEILYAANDFAGSATEYS 626 Query: 252 LIQERYPQGYWARYV 266 ++ +YP+ +A Y Sbjct: 627 VVVTKYPESPFAPYA 641 >gi|17545456|ref|NP_518858.1| hypothetical protein RSc0737 [Ralstonia solanacearum GMI1000] gi|17427748|emb|CAD14267.1| probable transmembrane protein [Ralstonia solanacearum GMI1000] Length = 274 Score = 65.1 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 40/132 (30%), Gaps = 8/132 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 ++ Y+ A+ + +F A F+ + +P + + Y+ Y+ + Sbjct: 151 PGEKTEYDAALKTFQSGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGST 210 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + E P+ V Q+A + + ++ Y + Sbjct: 211 YVLENMARANPQHPKAPEALLQVA------TNQGESGQKAA--ARKTLETVIAEYPGTEQ 262 Query: 175 VKGARFYVTVGR 186 K A + R Sbjct: 263 AKTATSRLKTMR 274 Score = 42.4 bits (99), Expect = 0.074, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K S V++Y SPY+ A+ N L Y +R Y + Sbjct: 167 GDFKGAGNQFSAFVKKYPQSPYLPLAQ---FWLGNAL----------YAQRD-YKGSTYV 212 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + + A EA+ ++ AR+ + + YP A+ + +K Sbjct: 213 LENMARANPQHPKAPEALLQVATNQGESGQKAAARKTLETVIAEYPGTEQAKTATSRLK 271 Score = 42.0 bits (98), Expect = 0.088, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 54/140 (38%), Gaps = 22/140 (15%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 K+ +A + +G ++ A + ++ +YP+S + + +G + D + Sbjct: 153 EKTEYDAALKTFQSGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQ-----RDYK 207 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 + +L+ M+R P A +++ + G+ AA Sbjct: 208 GSTYVLENMARAN---PQHPKAPEAL--------------LQVATNQGESGQKAAARKTL 250 Query: 214 QLVLANYSDAEHAEEAMARL 233 + V+A Y E A+ A +RL Sbjct: 251 ETVIAEYPGTEQAKTATSRL 270 >gi|222054652|ref|YP_002537014.1| tol-pal system protein YbgF [Geobacter sp. FRC-32] gi|221563941|gb|ACM19913.1| tol-pal system protein YbgF [Geobacter sp. FRC-32] Length = 241 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 46/141 (32%), Gaps = 8/141 (5%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + ++ Y KA N++ A + F + +P + ++ Sbjct: 107 NREPSAAEGDSAHQDTYVKAFGLFSANNYNAAIDAFEAFMKAYPDSEYVGNAMYWVGECY 166 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y+ Y +A + I+ +P+ V VG + M + + Sbjct: 167 YTQHNYNEALESFSKVISTFPDGNKVPDAMLKVGYTLISMNEPA--------KAKESLQA 218 Query: 165 IVERYTNSPYVKGARFYVTVG 185 +V+++ S AR + Sbjct: 219 LVDKFPKSQAAAKAREKLVRL 239 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 47/116 (40%), Gaps = 15/116 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + ++ Y +S YV A ++V Y + Y A+ F V Sbjct: 137 AAIDAFEAFMKAYPDSEYVGNAMYWVGEC--------------YYTQHNYNEALESFSKV 182 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV-ETLVK 271 ++ + D +AM ++ +++ +A+E + + +++P+ A E LV+ Sbjct: 183 ISTFPDGNKVPDAMLKVGYTLISMNEPAKAKESLQALVDKFPKSQAAAKAREKLVR 238 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 Y AAI F+ + Y D+E+ AM + E Y +EA E S + +P G Sbjct: 133 NNYNAAIDAFEAFMKAYPDSEYVGNAMYWVGECYYTQHNYNEALESFSKVISTFPDGN-- 190 Query: 264 RYVETLVK 271 + + ++K Sbjct: 191 KVPDAMLK 198 >gi|271499766|ref|YP_003332791.1| tol-pal system protein YbgF [Dickeya dadantii Ech586] gi|270343321|gb|ACZ76086.1| tol-pal system protein YbgF [Dickeya dadantii Ech586] Length = 270 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A L+++ + +A F + +P + + + Y+ GK +A Sbjct: 153 YNAAASLVLEKKQYDQAIAAFQNFVKRYPDSTYQPNANYWLGQLFYNKGKKDDSAYYFAN 212 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + ++ T ++++ Y N+ K A+ Sbjct: 213 VVKNYPKSPKAPEAMFKVGL--------IMQEKGQTDKAKAVYQQVIKNYPNTDGAKQAQ 264 Query: 180 FYVTVG 185 + Sbjct: 265 KRLDSL 270 Score = 62.4 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + +++ + V+RY +S Y A +++ Sbjct: 149 ANTDYNAAASLVLEKKQYDQAIAAFQNFVKRYPDSTYQPNANYWLGQL------------ 196 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +Y K + +A F V+ NY + A EAM ++ D+A+ V + + Y Sbjct: 197 -FYNKGKKDDSA-YYFANVVKNYPKSPKAPEAMFKVGLIMQEKGQTDKAKAVYQQVIKNY 254 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 255 PNTDGAKQAQK 265 >gi|238793899|ref|ZP_04637519.1| hypothetical protein yinte0001_25140 [Yersinia intermedia ATCC 29909] gi|238726802|gb|EEQ18336.1| hypothetical protein yinte0001_25140 [Yersinia intermedia ATCC 29909] Length = 260 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 52/156 (33%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPF 89 + + + Y AV L+++ F +A F + +P Sbjct: 113 SAAGSSDTAAAGAAAATAAPAASTGDENSDYNAAVSLALEKKQFDQAITAFQGFVKQYPK 172 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 173 STYQPNANYWLGQLYYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGV--------IM 224 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ + +++++Y N+ K A+ ++ Sbjct: 225 QDKGQSDKAKAVYQQVIKQYPNTDAAKQAQKRLSAL 260 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 14/129 (10%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S + +++ + V++Y S Y A +++ G+ Sbjct: 141 SDYNAAVSLALEKKQFDQAITAFQGFVKQYPKSTYQPNANYWL--------------GQL 186 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y +G+ A + +V+ NY + + EAM ++ D+A+ V + ++YP Sbjct: 187 YYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPN 246 Query: 260 GYWARYVET 268 A+ + Sbjct: 247 TDAAKQAQK 255 >gi|300692235|ref|YP_003753230.1| associated to Tol-Pal complex protein (ygcF) [Ralstonia solanacearum PSI07] gi|299079295|emb|CBJ51967.1| putative associated to Tol-Pal complex protein (ygcF) [Ralstonia solanacearum PSI07] Length = 274 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 40/132 (30%), Gaps = 8/132 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 ++ Y+ A+ + +F A F+ + +P + + Y+ Y+ + Sbjct: 151 PGEKTEYDAALKTFQSGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGST 210 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + E P+ + Q+A + + +V Y + Sbjct: 211 YVLENMARANPQHPKAPEALLQIA------TNQGESGQKAA--ARKTLEAVVAEYPGTEQ 262 Query: 175 VKGARFYVTVGR 186 K A + R Sbjct: 263 AKTASSRLKTMR 274 Score = 43.2 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K S V++Y SPY+ A+ N L Y +R Y + Sbjct: 167 GDFKGAGNQFSAFVKKYPQSPYLPLAQ---FWLGNAL----------YAQRD-YKGSTYV 212 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + + A EA+ ++ AR+ + + YP A+ + +K Sbjct: 213 LENMARANPQHPKAPEALLQIATNQGESGQKAAARKTLEAVVAEYPGTEQAKTASSRLK 271 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 54/140 (38%), Gaps = 22/140 (15%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 K+ +A + +G ++ A + ++ +YP+S + + +G + D + Sbjct: 153 EKTEYDAALKTFQSGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQ-----RDYK 207 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 + +L+ M+R P A ++I + G+ AA Sbjct: 208 GSTYVLENMARAN---PQHPKAPEAL--------------LQIATNQGESGQKAAARKTL 250 Query: 214 QLVLANYSDAEHAEEAMARL 233 + V+A Y E A+ A +RL Sbjct: 251 EAVVAEYPGTEQAKTASSRL 270 >gi|310819959|ref|YP_003952317.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309393031|gb|ADO70490.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 1109 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 71/224 (31%), Gaps = 35/224 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ A L + +A + + + P A K+L +A + ++ A L E Sbjct: 687 FKLADQLLAAGQYDEAAKKYLLLVEEAPRHEFADKALNNAAIAYENTRRFDSALKLYERI 746 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-- 178 +YP SK D + V + + +D + ++V+ Y S + A Sbjct: 747 YREYPNSKLADAALFRVAV---NAEKSYDFD-----KAVVNYQKLVKDYPTSQEREAALY 798 Query: 179 -RFYVTVGRN----------QLAA----------KEVEIGRYYLKRGEYVAAIPRFQLVL 217 + + LA + Y K ++ I + Sbjct: 799 NAARLMEAQQRYPEAAKAFVHLAEQYPKAEDAPKHQYRAALIYEKNQDWWRTIRELNTFV 858 Query: 218 ANYSDAEH----AEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + ++ EA R+ +A++ L A ++ + Sbjct: 859 SAFAKKPAQGELVVEAKKRIGDAFLKLNDERNAERAWTVAASEF 902 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 52/164 (31%), Gaps = 29/164 (17%) Query: 105 YSAGKYQQAASLGEEYITQY-------PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + AA +E +Y P + D ++Y R Sbjct: 687 FKLADQLLAAGQYDEAAKKYLLLVEEAPRHEFADKALNNAAIAYENT--------RRFDS 738 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 L+ RI Y NS A F V N A K + + A+ +Q ++ Sbjct: 739 ALKLYERIYREYPNSKLADAALFRV--AVN--AEKSYD----------FDKAVVNYQKLV 784 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Y ++ E A+ A EA + + E+YP+ Sbjct: 785 KDYPTSQEREAALYNAARLMEAQQRYPEAAKAFVHLAEQYPKAE 828 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 30/79 (37%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + + D T + +Y A L +Q + +A + F + +P A A K +A + Sbjct: 781 QKLVKDYPTSQEREAALYNAARLMEAQQRYPEAAKAFVHLAEQYPKAEDAPKHQYRAALI 840 Query: 104 QYSAGKYQQAASLGEEYIT 122 + + +++ Sbjct: 841 YEKNQDWWRTIRELNTFVS 859 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 51/137 (37%), Gaps = 4/137 (2%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 +Y + ++ AV K +F KA + + +D+P + +L +A + Sbjct: 746 IYREYPNSKLADAALFRVAVNAEKSYDFDKAVVNYQKLVKDYPTSQEREAALYNAARLME 805 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + +Y +AA QYP++++ Y + Y + +D R + ++ Sbjct: 806 AQQRYPEAAKAFVHLAEQYPKAEDAPKHQYRAALIY-EKNQDWWRTIRELNTFVSAFAKK 864 Query: 166 VERYTNSPYVKGARFYV 182 V A+ + Sbjct: 865 PA---QGELVVEAKKRI 878 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 59/181 (32%), Gaps = 25/181 (13%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 NF + + + ++FP + + + + ++ ++ + ++ I +YP+S+ Sbjct: 165 NFGLSIALYQRLIQEFPDYRLNDGAWYLLGYCLEKQNQFDESHATYQQLIARYPKSRFAI 224 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 + +G Y D R + P A + + Sbjct: 225 EAWVRIGEHYFDSYSD-----AEALAKAAQAYEAATRDPSHPLYDKALYKLGWA------ 273 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 Y + + ++ RF + Y + L E + L +EA + V+ Sbjct: 274 --------YYRMDRFDESVDRFLDLADFYETQKQT------LGEGFGGGDLREEALQYVA 319 Query: 252 L 252 + Sbjct: 320 I 320 >gi|91787862|ref|YP_548814.1| hypothetical protein Bpro_1986 [Polaromonas sp. JS666] gi|91697087|gb|ABE43916.1| Tetratricopeptide TPR_2 [Polaromonas sp. JS666] Length = 253 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 49/141 (34%), Gaps = 8/141 (5%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V +++ +E A+ L++ +F+ A F + +P +G +L QY Sbjct: 121 VDGKEFVAEPAEKQEFEAALATLRKGDFAAAQTSFVAFMKRYPQSGYTSSALFWLGNAQY 180 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + Y+ A + +T P + ++ + K + + + Sbjct: 181 ALRNYRDAVANFRTLVTLEPGHMRAPEALLSMANCQVEL--------KDVKSARKTLEDL 232 Query: 166 VERYTNSPYVKGARFYVTVGR 186 V+ Y S A+ + + Sbjct: 233 VKAYPQSEAASVAKERLVRLK 253 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 22/143 (15%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A K +A G + A + ++ +YP+S + +G + + Sbjct: 131 AEKQEFEAALATLRKGDFAAAQTSFVAFMKRYPQSGYTSSALFWLGNAQYAL-------- 182 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R + + +V A + + +L + +A Sbjct: 183 RNYRDAVANFRTLVTLEPGHMRAPEALLSMANCQVEL--------------KDVKSARKT 228 Query: 213 FQLVLANYSDAEHAEEAMARLVE 235 + ++ Y +E A A RLV Sbjct: 229 LEDLVKAYPQSEAASVAKERLVR 251 Score = 42.8 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 36/105 (34%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 ++RY S Y A F++ + L Y A+ F+ + Sbjct: 150 AAQTSFVAFMKRYPQSGYTSSALFWLGNAQYAL--------------RNYRDAVANFRTL 195 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + A EA+ + V L + AR+ + + + YPQ Sbjct: 196 VTLEPGHMRAPEALLSMANCQVELKDVKSARKTLEDLVKAYPQSE 240 >gi|296162178|ref|ZP_06844974.1| tol-pal system protein YbgF [Burkholderia sp. Ch1-1] gi|295887564|gb|EFG67386.1| tol-pal system protein YbgF [Burkholderia sp. Ch1-1] Length = 249 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 48/132 (36%), Gaps = 8/132 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + E + A + +F A F FP + + Y+ Y+ + Sbjct: 126 PGETESFNAASQQFRNGDFKNAAASFRTFISKFPNSPYQPTAQYWLGNALYALRDYKGST 185 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + + + YP+ L+ ++ Q+ + Q+A + + +IV +Y S Sbjct: 186 ATWQGVVKNYPQHPRAPEA--LLAIANNQLEQG----QKAA--ARKTLEQIVAQYGGSDV 237 Query: 175 VKGARFYVTVGR 186 + A+ ++ + Sbjct: 238 AQSAQSKLSQIK 249 Score = 52.0 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + ++ NSPY A++++ + R +Y + Sbjct: 142 GDFKNAAASFRTFISKFPNSPYQPTAQYWL--------GNALYALR------DYKGSTAT 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q V+ NY A EA+ + + AR+ + I +Y Sbjct: 188 WQGVVKNYPQHPRAPEALLAIANNQLEQGQKAAARKTLEQIVAQYGGSD 236 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 22/132 (16%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Q+ G ++ AA+ +I+++P S Y +G + + R K Sbjct: 138 QFRNGDFKNAAASFRTFISKFPNSPYQPTAQYWLGNALYAL--------RDYKGSTATWQ 189 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 +V+ Y P A + I L++G+ AA + ++A Y + Sbjct: 190 GVVKNYPQHPRAPEAL--------------LAIANNQLEQGQKAAARKTLEQIVAQYGGS 235 Query: 224 EHAEEAMARLVE 235 + A+ A ++L + Sbjct: 236 DVAQSAQSKLSQ 247 Score = 35.5 bits (81), Expect = 7.6, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 24/59 (40%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + G++ A F+ ++ + ++ + A L A AL + + + YPQ Sbjct: 139 FRNGDFKNAAASFRTFISKFPNSPYQPTAQYWLGNALYALRDYKGSTATWQGVVKNYPQ 197 >gi|194337184|ref|YP_002018978.1| tol-pal system protein YbgF [Pelodictyon phaeoclathratiforme BU-1] gi|194309661|gb|ACF44361.1| tol-pal system protein YbgF [Pelodictyon phaeoclathratiforme BU-1] Length = 262 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 8/143 (5%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 Q + V + E+ LK +N+ + E F + P + +A ++ Sbjct: 128 QQNDTVQSAQKPSALTDAALLEEGRERLKSKNYVASRESFGLLMQRTPPSALADQAQFFI 187 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A + Y++A + I +Y +S Y +S + I D Sbjct: 188 AESYFGEKWYEKAILEYQVVIAKYLKSNKRPEALYKQALS-FEFIGDPA-------NAKA 239 Query: 161 YMSRIVERYTNSPYVKGARFYVT 183 +V Y ++P AR + Sbjct: 240 RFKDLVNVYPDAPQATQARKKLQ 262 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 14/103 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + +++R S A+ I Y Y AI +Q+V Sbjct: 162 ASRESFGLLMQRTPPSALADQAQ--------------FFIAESYFGEKWYEKAILEYQVV 207 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +A Y + EA+ + ++ + A+ + YP Sbjct: 208 IAKYLKSNKRPEALYKQALSFEFIGDPANAKARFKDLVNVYPD 250 >gi|120436880|ref|YP_862566.1| hypothetical protein GFO_2543 [Gramella forsetii KT0803] gi|117579030|emb|CAL67499.1| conserved hypothetical protein, secreted [Gramella forsetii KT0803] Length = 1006 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 70/211 (33%), Gaps = 33/211 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-----KSLLMSAFVQYSAGKYQQAAS 115 Y + K+ ++S+A YF + + A +LL Y +Y A Sbjct: 505 YNIGYAYFKKNDYSQAVNYFKS----YASSSNAEGAKKNDALLRLGDTYYVTSQYWPAME 560 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + I N DY + +SY + R+ ++ ++ +Y SPY Sbjct: 561 AYQNAINN--GVSNADYAAFQKAISYGFVNRNDTK--------IEELNSFTGKYPRSPYR 610 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 A E+ G Y+ AI + ++ + + +AM R Sbjct: 611 DD------------AMYEL--GNTYVASNNTTQAIQSYNRLIRDVPQSALVPKAMLRQGL 656 Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYV 266 Y ++A E + + YP A+ Sbjct: 657 IYYNNNDGNKALERLRKVVADYPNTPEAKQA 687 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 75/213 (35%), Gaps = 46/213 (21%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +YE ++ N ++A + +N+ RD P + + K++L + Y+ +A Sbjct: 611 DDAMYELGNTYVASNNTTQAIQSYNRLIRDVPQSALVPKAMLRQGLIYYNNNDGNKALER 670 Query: 117 GEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPYDQRATK-- 156 + + YP + +Y ++ + + + + D D + Sbjct: 671 LRKVVADYPNTPEAKQAVSTARNVYVDLGRTDEYASWVRNIDFVE-VSDADLDNTTYEAA 729 Query: 157 ----------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 + + ++ + N + A + + Y + G Sbjct: 730 ENQYLNNNSAKAIANFEKYIQNFPNGIHSINAN--------------FYLAQLYYRDGNV 775 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 +IP ++ V + E +E+A+ARL + Y+ Sbjct: 776 EKSIPNYRYVTSK-PKNEFSEQALARLSQIYLE 807 Score = 39.7 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 72/213 (33%), Gaps = 24/213 (11%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 R++ V+D YE A N +KA F + ++FP + + A + Sbjct: 709 RNIDFVEVSDADLDNTTYEAAENQYLNNNSAKAIANFEKYIQNFPNGIHSINANFYLAQL 768 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y G +++ Y+T P+++ + + + +++ L + Sbjct: 769 YYRDGNVEKSIPNY-RYVTSKPKNEFSEQAL--------ARLSQIYLEKKDYTHALPLLE 819 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN-YSD 222 ++ ++ V + L Y + G + A VL N ++ Sbjct: 820 KLEKQ-------ADNEQNVVFAQQNLMKS-------YFETGNFGKANEYADKVLNNSTAE 865 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 E +A + A V +AR +Q+ Sbjct: 866 TEARNDARIMVARAAVKSGNDTKARSAYKEVQK 898 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 58/196 (29%), Gaps = 34/196 (17%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + +A Y + + Y G Y+ A S + + Sbjct: 251 GESYFNLGKYEEAIPYLKG----YNGMRGKWNNTDYYQLGYAYYKQGNYEAAISEFNKIV 306 Query: 122 TQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + YY + SY + DQ+ + L S A+ Sbjct: 307 D---GKNAIAQNAYYHLAQSYLES------DQK--QQALNAFKN------ASEMEFDAKI 349 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 N A EIG Y + L Y ++E +E + L+++++ Sbjct: 350 QQDALLNY-AKLSYEIG------NSYESPSQVLINYLNKYPESEKRQEMESLLIDSFITS 402 Query: 241 ALMDEAREVVSLIQER 256 +EA + L++ Sbjct: 403 KNYEEA---MRLLENN 415 >gi|121604949|ref|YP_982278.1| hypothetical protein Pnap_2048 [Polaromonas naphthalenivorans CJ2] gi|120593918|gb|ABM37357.1| Tetratricopeptide TPR_2 repeat protein [Polaromonas naphthalenivorans CJ2] Length = 253 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 52/151 (34%), Gaps = 20/151 (13%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 S V +++ +E A+ L++ F+ A F ++ +P +G +L A Sbjct: 117 SKVSVDGREFAAEPAEKQEFEAALASLRKGEFAAAQTSFTAFTKRYPQSGYKSSALFWLA 176 Query: 102 FVQYSAGKYQQA------ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 QY+ Y+ A + + PE + ++ + Sbjct: 177 NAQYALRDYKSAVNNFRTVASAD------PEHVRAPEALLSMANCQVEL--------KDA 222 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 K + + +V+ Y S A+ ++ + Sbjct: 223 KSARKTLEELVKTYPQSEAASVAKERLSKLK 253 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + +RY S Y A F++ + L +Y +A+ F+ V Sbjct: 150 AAQTSFTAFTKRYPQSGYKSSALFWLANAQYAL--------------RDYKSAVNNFRTV 195 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A EA+ + V L AR+ + + + YPQ Sbjct: 196 ASADPEHVRAPEALLSMANCQVELKDAKSARKTLEELVKTYPQSE 240 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 42/143 (29%), Gaps = 22/143 (15%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A K +A G++ A + + +YP+S + + + + Sbjct: 131 AEKQEFEAALASLRKGEFAAAQTSFTAFTKRYPQSGYKSSALFWLANAQYAL-------- 182 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R K + + A + + +L + +A Sbjct: 183 RDYKSAVNNFRTVASADPEHVRAPEALLSMANCQVEL--------------KDAKSARKT 228 Query: 213 FQLVLANYSDAEHAEEAMARLVE 235 + ++ Y +E A A RL + Sbjct: 229 LEELVKTYPQSEAASVAKERLSK 251 >gi|118578970|ref|YP_900220.1| putative lipoprotein [Pelobacter propionicus DSM 2379] gi|118501680|gb|ABK98162.1| lipoprotein, putative [Pelobacter propionicus DSM 2379] Length = 236 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 8/124 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y KA +FS A + F + P + +L Y+ + QAA+ ++ Sbjct: 120 YVKAFGLYSANSFSAAIQAFQAFLANSPGSDYTPNALYWIGECHYTLSDFPQAAAAFKKL 179 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP+S +G D+ + ++ +Y +SP AR Sbjct: 180 AEGYPKSAKAPDALLKLG---YTQTAMKQRDR-----ATRTFESLIRQYPSSPAASRARE 231 Query: 181 YVTV 184 +T Sbjct: 232 RLTA 235 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 41/139 (29%), Gaps = 22/139 (15%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + + AF YSA + A + ++ P S Y +G + + Sbjct: 118 AEYVKAFGLYSANSFSAAIQAFQAFLANSPGSDYTPNALYWIGECHYTLSDFP------- 170 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 ++ E Y S A + + + ++ A F+ Sbjct: 171 -QAAAAFKKLAEGYPKSAKAPDALLKLGYTQTAMKQRD--------------RATRTFES 215 Query: 216 VLANYSDAEHAEEAMARLV 234 ++ Y + A A RL Sbjct: 216 LIRQYPSSPAASRARERLT 234 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 31/105 (29%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 +Q + S Y A +++ Y AA F+ + Sbjct: 134 AAIQAFQAFLANSPGSDYTPNALYWIGECH-------------YTLSDFPQAAAA-FKKL 179 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y + A +A+ +L A+ D A + +YP Sbjct: 180 AEGYPKSAKAPDALLKLGYTQTAMKQRDRATRTFESLIRQYPSSP 224 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 35/104 (33%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 F + Q+ + +S +Y +F +A F + + Sbjct: 123 AFGLYSANSFSAAIQAFQAFLANSPGSDYTPNALYWIGECHYTLSDFPQAAAAFKKLAEG 182 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 +P + A +LL + Q + + +A E I QYP S Sbjct: 183 YPKSAKAPDALLKLGYTQTAMKQRDRATRTFESLIRQYPSSPAA 226 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 2/68 (2%) Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + AAI FQ LAN +++ A+ + E + L+ +A + E YP+ A Sbjct: 130 NSFSAAIQAFQAFLANSPGSDYTPNALYWIGECHYTLSDFPQAAAAFKKLAEGYPKS--A 187 Query: 264 RYVETLVK 271 + + L+K Sbjct: 188 KAPDALLK 195 >gi|238757960|ref|ZP_04619141.1| hypothetical protein yaldo0001_8360 [Yersinia aldovae ATCC 35236] gi|238703714|gb|EEP96250.1| hypothetical protein yaldo0001_8360 [Yersinia aldovae ATCC 35236] Length = 260 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 49/126 (38%), Gaps = 9/126 (7%) Query: 61 YEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y AV L+++ + +A F + +P + + + Y+ GK AA Sbjct: 143 YNAAVSLALEKKQYDQAITAFQSFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAV 202 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ + +++++Y N+ K A+ Sbjct: 203 VVKNYPKSPKSSEAMFKVGV--------IMQDKGQSDKAKAVYQQVIKQYPNTDAAKQAQ 254 Query: 180 FYVTVG 185 ++ Sbjct: 255 KRLSAL 260 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 14/129 (10%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S + +++ + V++Y S Y A +++ G+ Sbjct: 141 SDYNAAVSLALEKKQYDQAITAFQSFVKQYPKSTYQPNANYWL--------------GQL 186 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y +G+ A + +V+ NY + + EAM ++ D+A+ V + ++YP Sbjct: 187 YYNKGKKDDAAYYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPN 246 Query: 260 GYWARYVET 268 A+ + Sbjct: 247 TDAAKQAQK 255 >gi|255012572|ref|ZP_05284698.1| TPR domain-containing protein [Bacteroides sp. 2_1_7] Length = 999 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 28/239 (11%), Positives = 71/239 (29%), Gaps = 45/239 (18%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + + ++ ++KA + + + + + + +Y +A Sbjct: 466 NDAYFWRGESYYRQGEYNKAISDYRTYLNNTRQRNTDMYALAHYNLGYSYFKLKEYGEAL 525 Query: 115 SLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM-------------- 158 + +Y+ ++ Y +G + ++ T+ Sbjct: 526 NRFRQYVNLESNQQTPAYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQK 585 Query: 159 -------------LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 + M R++ + S YV A E GR Y+ Sbjct: 586 GFLLGLQKDYKGKISVMDRLIREFPESQYVDDAL--------------FEKGRSYVLLDN 631 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 A F+ ++ ++ + A +A +L Y ++A + + YP A+ Sbjct: 632 NQTAAASFEQLMRDFPQSSLARKAGVQLGLIYFNDNQPEKAADAYKSVISNYPGSEEAK 690 Score = 62.4 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 94/268 (35%), Gaps = 57/268 (21%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 I +C +VG S + Y ++ + +N+S + + Sbjct: 4 ILIPLCLVVGSHMASGQRSY-----QFDAPNRLFVEGKELFSLKNYSGCIDKLEAYKQHS 58 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--- 144 A + +++ M + Y G+ A L ++Y+ YP S++ D V +L+G ++ Sbjct: 59 TDADLIQEADYMLVYSAYEQGR-PNAVELLKDYLDVYPASRHADEVNFLIGSAHFGQGEY 117 Query: 145 -----------IRDVPYDQRAT---------------KLMLQYMSRIVERYTNSPYVKGA 178 I + +Q+ + Y +RI + + Y + + Sbjct: 118 QKAIFWFNESNIDMLSPEQQEAYCFRLAYSLLQIGDMEKARGYFARIEQI--GTKYREAS 175 Query: 179 RFYVTVG-------RNQLAA----------KE---VEIGRYYLKRGEYVAAIPRFQLVLA 218 +YV N L KE I + Y + +Y I + +LA Sbjct: 176 TYYVAYIDYATGKYNNALVEFTRLKDLPDYKERSLYYITQIYFIQNKYEKVISEGKELLA 235 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEA 246 +Y D+E+ E + AY L D+A Sbjct: 236 SYPDSENNSEVYRIMGNAYYHLGNEDQA 263 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 76/216 (35%), Gaps = 33/216 (15%) Query: 46 VYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFP----FAGVARKSLLMS 100 V L+S + Y + + F+ A E + + ++ P ++ + LL Sbjct: 532 VNLESNQQTPAYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQKGFLLGL 591 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 Y+ S+ + I ++PES+ VD + G SY + + + Sbjct: 592 ------QKDYKGKISVMDRLIREFPESQYVDDALFEKGRSYVLLDNN--------QTAAA 637 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 +++ + S + A + + Y + A ++ V++NY Sbjct: 638 SFEQLMRDFPQSSLARKAGVQLGLI--------------YFNDNQPEKAADAYKSVISNY 683 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +E A+ A+ L Y+ L ++ + + Sbjct: 684 PGSEEAKVALQDLKSVYIELNDINSFAAYANSLGGN 719 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 76/234 (32%), Gaps = 36/234 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGE 118 +++ KA + F++ + +R + Y G+Y +A S Sbjct: 431 LFQLGTQAFTNMELDKAVDLFSRAISLGAYNLESRNDAYFWRGESYYRQGEYNKAISDYR 490 Query: 119 EYITQYPESKNVD-YVY--YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SP 173 Y+ +N D Y Y +G SY ++ + L + V +N +P Sbjct: 491 TYLN-NTRQRNTDMYALAHYNLGYSYFKL--------KEYGEALNRFRQYVNLESNQQTP 541 Query: 174 YVKGARFYVTVG-------------RNQLAAKEVEIGRY--YLK------RGEYVAAIPR 212 A + + A + G Y Y K + +Y I Sbjct: 542 AYADAYNRIGDCLFHNRQFAMAEENYTRAAQLQPSAGDYSVYQKGFLLGLQKDYKGKISV 601 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 ++ + ++++ ++A+ +YV L A + +PQ AR Sbjct: 602 MDRLIREFPESQYVDDALFEKGRSYVLLDNNQTAAASFEQLMRDFPQSSLARKA 655 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 49/167 (29%), Gaps = 32/167 (19%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S TD + ++Y V + + N+S A + R+ +++ + L Sbjct: 272 SSTDSPLRGDLYILGVCYYNKGNYSSAVNALGRTVREN--DALSQNAYLYLGQSYLKLKD 329 Query: 110 YQQAASLGE-----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 A E + + K Y +YA +I + + + Sbjct: 330 KNNARMAFEAAATSSFDK---QVKEA--AMY----NYALLIHETAF--TGFGESVTIFED 378 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + NS Y Y+ YL Y AA+ Sbjct: 379 FLNDFPNSKYADKVNDYLVEV--------------YLTTKNYQAALN 411 >gi|302338557|ref|YP_003803763.1| hypothetical protein Spirs_2047 [Spirochaeta smaragdinae DSM 11293] gi|301635742|gb|ADK81169.1| conserved hypothetical protein [Spirochaeta smaragdinae DSM 11293] Length = 314 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 77/203 (37%), Gaps = 11/203 (5%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 R+V LD+ + Y A + +N+ A +FP + R + Sbjct: 52 REVILDNDAQKLHGAAYYWLARSEMALKNYDDAARDLEYFLENFPKSSFYRDGSYWKGRL 111 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + + A ++I YP+ + V YY +G S + + + + Sbjct: 112 LFLQNDFDNAIRALYDFIEAYPDHEFVANAYYWIGESLFAL--------GHLEKAQRIFN 163 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY-LKRGEYVAAIPRFQLVLANYSD 222 I+ Y S V+ +R+ +++ ++ +E E+ R + EY++A+ FQ Y Sbjct: 164 LIITDYPASFKVEASRYRLSLI--EMKEREEELMRLLKMSHEEYLSALEEFQRREKMYDQ 221 Query: 223 AEHAEEAMARLVEAYVALALMDE 245 A + + A AL+ E Sbjct: 222 AISGYQRKLTALTANDKEALVQE 244 Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 44/128 (34%), Gaps = 21/128 (16%) Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF---YVTVGRNQLAAK 192 L G +Y + R + + + +E + S + + + + +N Sbjct: 63 LHGAAYYWLARS-EMALKNYDDAARDLEYFLENFPKSSFYRDGSYWKGRLLFLQN----- 116 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 ++ AI + Y D E A + E+ AL +++A+ + +L Sbjct: 117 ------------DFDNAIRALYDFIEAYPDHEFVANAYYWIGESLFALGHLEKAQRIFNL 164 Query: 253 IQERYPQG 260 I YP Sbjct: 165 IITDYPAS 172 >gi|188996311|ref|YP_001930562.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931378|gb|ACD66008.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 938 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 89/221 (40%), Gaps = 31/221 (14%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110 D+ ++ Y A F +F +A + F++ + RK+LL A Y+ G+ Sbjct: 563 DLIAKKAYYLYAYTFFSSGDFVRASQEFSKFLEKYKNDDDIYTRKALLRLADSYYNLGER 622 Query: 111 QQAASLGEEYITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 A ++ +++IT+Y +K+ +D Y L+ + DV + + +Y Sbjct: 623 DLAVNIYKDFITKYSGTKDSIDAAYNLIILESKGSSEDVE----------SMIKSFLAKY 672 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 N P + + Y +G+ AI +Q V A S+++ + A Sbjct: 673 PNYPLANILKIQLAEI--------------YQNKGKIEDAIKIYQEVAA--SNSKESALA 716 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 +L E+Y L +D+A++V LI + L+ Sbjct: 717 TYKLAESYYKLNQLDKAKQV--LIDYLNTNNEEYKVPSKLL 755 Score = 42.8 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 27/49 (55%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +LL A Y+ G A S E++I +Y + KN+ Y YYL+G+ + Sbjct: 113 ALLSDAIDYYNKGDLLFAESSLEKFIEKYKDHKNLFYAYYLLGVVKYNL 161 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 43/133 (32%), Gaps = 14/133 (10%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ A + L++ ++ KA YF + P + Y + A S E Sbjct: 784 FKLAKILLQKGDYDKASAYFKELLEKHP--EKVNELSFYIGKTYYLMNNEKDAVSYLENG 841 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + YYL+GM Y + L Y + Y + + A+ Sbjct: 842 TKS-SNYNDAAESYYLLGMIYNK---------ENPNKALNYFLNGIYLYPEAKDIT-AKS 890 Query: 181 YVTVGRNQL-AAK 192 + + L A K Sbjct: 891 RIEAAKILLKAEK 903 >gi|329964267|ref|ZP_08301368.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057] gi|328525572|gb|EGF52615.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057] Length = 1010 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 73/212 (34%), Gaps = 31/212 (14%) Query: 46 VYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDF-PFAGVA--RKSLLMSA 101 V L+ + + Y + L + F +A Y+ + P + + +L+ Sbjct: 544 VQLEKGENPTALADAYNRIGDCNLHVRRFDEAKRYYTKAESLGTPAGDYSFYQLALVAG- 602 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 Y SL + ++YP S Y G SY Q + + Sbjct: 603 ----LQKDYNGKVSLLDRLASKYPHSPYAINALYEKGRSYVQSNNS--------RQAIAA 650 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 ++ +Y SP + A EIG Y + +Y AI ++ V+ Y Sbjct: 651 FRELLNKYPESPVSRKAAA--------------EIGLLYYQNDDYDRAIEAYKHVVTQYP 696 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +E A AM L YV +DE + + + Sbjct: 697 GSEEARLAMRDLKSIYVDANRVDEFATLAAQM 728 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 84/307 (27%), Gaps = 68/307 (22%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 +K + + ++ L+ + S ++ + +Y++ +++ +S A Sbjct: 3 HKISRILCTALCCAPLLATAQTSEKNT---------SPQGLYQEGQSLFQQKAYSAAISP 53 Query: 80 FNQCSRDF-----PFAGVARK--SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 + P + + + M Y Q+ L ++ +YP++ + + Sbjct: 54 LQAFIKQMDADGKPLSATGERQEAEYMLVCAAYELR-VPQSIELLRNFLDEYPDTPHANR 112 Query: 133 VYYLVGMSYA-----------------QMIRDVPYDQ------------RATKLMLQYMS 163 +Y L+ +Y ++ D K + Sbjct: 113 IYALIASAYFFEGKYDDALAMFNSARLDLLGSEERDDMTYRLATCYLKTGNVKEAAIWFE 172 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKR 203 + R T Y +Y++ R + I YL + Sbjct: 173 TL--RSTGKKYAADCSYYLSYIRYTQGRYDEALSGFLPLQDCTKYEALVPYYIAEIYLIK 230 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 Y A Q L+ Y H E L A EA + E Sbjct: 231 KNYDKAEIVAQNYLSAYPGQPHTGEMYRVLGTAEYHFGKYHEAMKSFERYLENNAGTTHR 290 Query: 264 RYVETLV 270 R ++ Sbjct: 291 RDALYML 297 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 76/254 (29%), Gaps = 61/254 (24%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--------SLLMSAFVQYSAG 108 +Y + + +A +FN + + R+ + A++ + Sbjct: 478 ADALYWLGEAYYRLGRMQEAARHFND------YLTLTRQRDTEMFALAYYNLAYIAFHQK 531 Query: 109 KYQQAASLGEEYITQ----YPESKNVDYVYYLVGMSY----------------------- 141 Y A S ++ P + Y +G Sbjct: 532 DYATAESRFRNFVQLEKGENPT--ALADAYNRIGDCNLHVRRFDEAKRYYTKAESLGTPA 589 Query: 142 ----AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + V Q+ + + R+ +Y +SPY N L K G Sbjct: 590 GDYSFYQLALVAGLQKDYNGKVSLLDRLASKYPHSPYA----------INALYEK----G 635 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 R Y++ AI F+ +L Y ++ + +A A + Y D A E + +Y Sbjct: 636 RSYVQSNNSRQAIAAFRELLNKYPESPVSRKAAAEIGLLYYQNDDYDRAIEAYKHVVTQY 695 Query: 258 PQGYWARYVETLVK 271 P AR +K Sbjct: 696 PGSEEARLAMRDLK 709 Score = 42.8 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 73/210 (34%), Gaps = 15/210 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A ++L ++N+ KA +P + + +Y GKY +A E Y Sbjct: 221 YYIAEIYLIKKNYDKAEIVAQNYLSAYPGQPHTGEMYRVLGTAEYHFGKYHEAMKSFERY 280 Query: 121 ITQYPESKNVDYVYYLVGMSYAQ-----MIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + + Y++GMS Q + D+ + L + + Sbjct: 281 LENNAGTTHRRDALYMLGMSCYQCGVYSQVPDILGEVTTGNDALSQNAYLHMGLAYLQLA 340 Query: 176 KGARFYVTVGRNQLAAKEVEI---GRYYLKR-------GEYVAAIPRFQLVLANYSDAEH 225 + + + + +++I Y + ++ F+ L + ++ + Sbjct: 341 DKTKARMAFEQAAASNADLKIKEQAAYNYALCIHETSYSAFGESVTVFEKFLNEFPNSPY 400 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQE 255 A++ LVE Y+ D A + + I Sbjct: 401 ADKVSNYLVEVYMNTRSYDAALKSIERITH 430 Score = 39.3 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 33/236 (13%), Positives = 76/236 (32%), Gaps = 40/236 (16%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115 +++ F +A YFNQ + ++ + + Y G+ Q+AA Sbjct: 443 LFQLGTQSFANTRFEQAIGYFNQSTAL---GQYNLQTKADALYWLGEAYYRLGRMQEAAR 499 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQM--IRDVPYDQRATKLMLQYMSRIVERYTNSP 173 +Y+T ++ + + ++Y + I D + + ++ + +P Sbjct: 500 HFNDYLTL-TRQRDTE----MFALAYYNLAYIAFHQKDYATAESRFRNFVQLEKG--ENP 552 Query: 174 YV-KGARFYVTVGRNQLAAKEVEIGRYYLK----------------------RGEYVAAI 210 A + + + E RYY K + +Y + Sbjct: 553 TALADAYNRIGDCNLHVRRFD-EAKRYYTKAESLGTPAGDYSFYQLALVAGLQKDYNGKV 611 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 + + Y + +A A+ +YV +A + +YP+ +R Sbjct: 612 SLLDRLASKYPHSPYAINALYEKGRSYVQSNNSRQAIAAFRELLNKYPESPVSRKA 667 Score = 37.8 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 35/135 (25%), Gaps = 53/135 (39%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP- 211 A + + + + NSPY Y+ Y+ Y AA+ Sbjct: 379 SAFGESVTVFEKFLNEFPNSPYADKVSNYLVEV--------------YMNTRSYDAALKS 424 Query: 212 ------------------------------RFQLVLANYSDAEHA--------EEAMARL 233 RF+ + ++ + +A+ L Sbjct: 425 IERITHPSKAILEAKQKILFQLGTQSFANTRFEQAIGYFNQSTALGQYNLQTKADALYWL 484 Query: 234 VEAYVALALMDEARE 248 EAY L M EA Sbjct: 485 GEAYYRLGRMQEAAR 499 >gi|298529331|ref|ZP_07016734.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510767|gb|EFI34670.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira thiodismutans ASO3-1] Length = 874 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 69/233 (29%), Gaps = 36/233 (15%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR--DFPFAGVARKSLL 98 + ++ E+ + + ++ A + F + P + L Sbjct: 225 TPAELQEEPPPAEMDRYEEMIAAGQMAMSGAEYAIAADIFEELKNDPQLP-EEHTEEVLY 283 Query: 99 MSAFVQYSA------GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A + G +Q E ++ P S + +G + Q+ + Sbjct: 284 SYAQANFQEHSHDIPGNFQDVLRPFERAVSANPGSDRLPEALLNMGYIHLQVGNEP---- 339 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 Y + +R+ V +Y+ G +Y R Y A Sbjct: 340 ----EARGYFDLLRDRFPEHEAVPATHYYM--------------GEHYKDRERYEEAADE 381 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 F+ V+ Y + + A L L L ++A +++ Y W RY Sbjct: 382 FEEVVQEYPQDDLVKPAAVALTRVLNELNLDEQAGDMLE-----YIDNRWPRY 429 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 74/239 (30%), Gaps = 38/239 (15%) Query: 49 DSVTDVRYQREVYEKAVLFLKE------QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 + + + +Y A +E NF F + P + ++LL + Sbjct: 271 PQLPEEHTEEVLYSYAQANFQEHSHDIPGNFQDVLRPFERAVSANPGSDRLPEALLNMGY 330 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + G +A + ++PE + V +Y +G Y D+ + Sbjct: 331 IHLQVGNEPEARGYFDLLRDRFPEHEAVPATHYYMGEHY--------KDRERYEEAADEF 382 Query: 163 SRIVERYTNSPYV-----------------KGARFYVTVGRNQLAAKEVE-------IGR 198 +V+ Y V + A + N+ ++ G Sbjct: 383 EEVVQEYPQDDLVKPAAVALTRVLNELNLDEQAGDMLEYIDNRWPRYHLDDPDFLVLAGN 442 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + +Y A +F + D + + +MAR+ + D ARE+ +Y Sbjct: 443 ILYRNEDYQDAREKFMHYINLLPDGDQVDVSMARVGDILYQQGHEDSAREMYEQTARQY 501 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 64/175 (36%), Gaps = 41/175 (23%) Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + + S +FP + +A +LL A G Y +A E++ +Y Sbjct: 528 LYERISEEFPDSPLAPVALLRLADWNLDNGLYDEAMDNVEDFYDRY-------------- 573 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIV-ERYTNSPY--VKGARFYVTVGRNQLAAKEVE 195 S+ +M RA + + +V E + + Y + A K++ Sbjct: 574 -SHREMW------PRALQTGVDAFESLVAENFPDQEYDDIIDAWERHDYLNE---NKDM- 622 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 L R +A + + Y D E+ +E++ RL E ++ + +DE Sbjct: 623 -----LDREALLA-------LASAYWDMENMQESL-RLAEPFLDMDKIDEHNIAA 664 >gi|115374590|ref|ZP_01461869.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca DW4/3-1] gi|115368356|gb|EAU67312.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca DW4/3-1] Length = 1077 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 71/224 (31%), Gaps = 35/224 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ A L + +A + + + P A K+L +A + ++ A L E Sbjct: 655 FKLADQLLAAGQYDEAAKKYLLLVEEAPRHEFADKALNNAAIAYENTRRFDSALKLYERI 714 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-- 178 +YP SK D + V + + +D + ++V+ Y S + A Sbjct: 715 YREYPNSKLADAALFRVAV---NAEKSYDFD-----KAVVNYQKLVKDYPTSQEREAALY 766 Query: 179 -RFYVTVGRN----------QLAA----------KEVEIGRYYLKRGEYVAAIPRFQLVL 217 + + LA + Y K ++ I + Sbjct: 767 NAARLMEAQQRYPEAAKAFVHLAEQYPKAEDAPKHQYRAALIYEKNQDWWRTIRELNTFV 826 Query: 218 ANYSDAEH----AEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + ++ EA R+ +A++ L A ++ + Sbjct: 827 SAFAKKPAQGELVVEAKKRIGDAFLKLNDERNAERAWTVAASEF 870 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 52/164 (31%), Gaps = 29/164 (17%) Query: 105 YSAGKYQQAASLGEEYITQY-------PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + AA +E +Y P + D ++Y R Sbjct: 655 FKLADQLLAAGQYDEAAKKYLLLVEEAPRHEFADKALNNAAIAYENT--------RRFDS 706 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 L+ RI Y NS A F V N A K + + A+ +Q ++ Sbjct: 707 ALKLYERIYREYPNSKLADAALFRV--AVN--AEKSYD----------FDKAVVNYQKLV 752 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Y ++ E A+ A EA + + E+YP+ Sbjct: 753 KDYPTSQEREAALYNAARLMEAQQRYPEAAKAFVHLAEQYPKAE 796 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 30/79 (37%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + + D T + +Y A L +Q + +A + F + +P A A K +A + Sbjct: 749 QKLVKDYPTSQEREAALYNAARLMEAQQRYPEAAKAFVHLAEQYPKAEDAPKHQYRAALI 808 Query: 104 QYSAGKYQQAASLGEEYIT 122 + + +++ Sbjct: 809 YEKNQDWWRTIRELNTFVS 827 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 51/137 (37%), Gaps = 4/137 (2%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 +Y + ++ AV K +F KA + + +D+P + +L +A + Sbjct: 714 IYREYPNSKLADAALFRVAVNAEKSYDFDKAVVNYQKLVKDYPTSQEREAALYNAARLME 773 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + +Y +AA QYP++++ Y + Y + +D R + ++ Sbjct: 774 AQQRYPEAAKAFVHLAEQYPKAEDAPKHQYRAALIY-EKNQDWWRTIRELNTFVSAFAKK 832 Query: 166 VERYTNSPYVKGARFYV 182 V A+ + Sbjct: 833 PA---QGELVVEAKKRI 846 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 59/181 (32%), Gaps = 25/181 (13%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 NF + + + ++FP + + + + ++ ++ + ++ I +YP+S+ Sbjct: 133 NFGLSIALYQRLIQEFPDYRLNDGAWYLLGYCLEKQNQFDESHATYQQLIARYPKSRFAI 192 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 + +G Y D R + P A + + Sbjct: 193 EAWVRIGEHYFDSYSD-----AEALAKAAQAYEAATRDPSHPLYDKALYKLGWA------ 241 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 Y + + ++ RF + Y + L E + L +EA + V+ Sbjct: 242 --------YYRMDRFDESVDRFLDLADFYETQKQT------LGEGFGGGDLREEALQYVA 287 Query: 252 L 252 + Sbjct: 288 I 288 >gi|148265712|ref|YP_001232418.1| tetratricopeptide domain-containing protein [Geobacter uraniireducens Rf4] gi|146399212|gb|ABQ27845.1| Tetratricopeptide domain protein [Geobacter uraniireducens Rf4] Length = 239 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 46/138 (33%), Gaps = 8/138 (5%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + ++ Y KA N+S A E F + +P + A ++ Sbjct: 107 NKEAAPSDNDSAPQDAYIKAFGLFSANNYSGAIEAFEAFVKSYPDSEYAGNAVYWVGECY 166 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y+ Y +A + + YP+ V +G S M + + Sbjct: 167 YTQHNYSKALESFSKVVVDYPKGNKVPDAMLKIGYSLISMNEPL--------KARAELQS 218 Query: 165 IVERYTNSPYVKGARFYV 182 +V +Y SP AR + Sbjct: 219 LVGKYPKSPAAAKARERL 236 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 47/143 (32%), Gaps = 22/143 (15%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A + + AF +SA Y A E ++ YP+S+ Y VG Y Q Sbjct: 118 APQDAYIKAFGLFSANNYSGAIEAFEAFVKSYPDSEYAGNAVYWVGECYYT--------Q 169 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 L+ S++V Y V A + + E + A Sbjct: 170 HNYSKALESFSKVVVDYPKGNKVPDAMLKIGYSL--------------ISMNEPLKARAE 215 Query: 213 FQLVLANYSDAEHAEEAMARLVE 235 Q ++ Y + A +A RL Sbjct: 216 LQSLVGKYPKSPAAAKARERLGR 238 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 40/104 (38%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 ++ V+ Y +S Y A ++V Y + Y A+ F V+ Sbjct: 138 AIEAFEAFVKSYPDSEYAGNAVYWVGEC--------------YYTQHNYSKALESFSKVV 183 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Y +AM ++ + +++ +AR + + +YP+ Sbjct: 184 VDYPKGNKVPDAMLKIGYSLISMNEPLKARAELQSLVGKYPKSP 227 >gi|94967621|ref|YP_589669.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94549671|gb|ABF39595.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 294 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 43/133 (32%), Gaps = 8/133 (6%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 +Y A+ + A F + + +A + A ++Y G + Sbjct: 157 QAPPADVLYNNALRDYNAGKYDLASGEFGDFMKFYADNDLAGNAQFYIADIEYRQGNFDN 216 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A ++ + QYP G + ++ Q+ ++ + ++ RY S Sbjct: 217 AVKDYDKVLEQYPSGNKAPAAQLKKGFALLEL------GQKDAG--VRELRSLINRYPRS 268 Query: 173 PYVKGARFYVTVG 185 + AR + Sbjct: 269 IEAQQARDRLARL 281 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 48/131 (36%), Gaps = 22/131 (16%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y+AGKY A+ +++ Y ++ + + D+ Y Q ++ + Sbjct: 172 YNAGKYDLASGEFGDFMKFYADNDLAGNAQFYIA--------DIEYRQGNFDNAVKDYDK 223 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 ++E+Y + A+ +L K+ A + + ++ Y + Sbjct: 224 VLEQYPSGNKAPAAQLKKGFALLELGQKD--------------AGVRELRSLINRYPRSI 269 Query: 225 HAEEAMARLVE 235 A++A RL Sbjct: 270 EAQQARDRLAR 280 Score = 38.9 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 1/78 (1%) Query: 184 VGRNQLAAK-EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 N LA + I ++G + A+ + VL Y A A + A + L Sbjct: 191 YADNDLAGNAQFYIADIEYRQGNFDNAVKDYDKVLEQYPSGNKAPAAQLKKGFALLELGQ 250 Query: 243 MDEAREVVSLIQERYPQG 260 D + + RYP+ Sbjct: 251 KDAGVRELRSLINRYPRS 268 >gi|116619653|ref|YP_821809.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116222815|gb|ABJ81524.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 310 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 39/123 (31%), Gaps = 7/123 (5%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 +++Y+ A + + A + F + + +A + A + Y Y A Sbjct: 168 PAQKLYDTARGDYQGGKYDLAVQEFADYLKYYGNTDLAPNAQFYVAMIHYGQKNYDDAVK 227 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + +YP++ G + +M ++ R+ + Sbjct: 228 EFDMVLEKYPDNNKTPEALLYKGRALVKM-------PGHKTDGAAEFMEVIRRFPKTDEA 280 Query: 176 KGA 178 + A Sbjct: 281 QQA 283 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 46/139 (33%), Gaps = 21/139 (15%) Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 + + L +A Y GKY A +Y+ Y + + V M + Sbjct: 166 PMPAQKLYDTARGDYQGGKYDLAVQEFADYLKYYGNTDLAPNAQFYVAMIHY-------- 217 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 Q+ ++ ++E+Y ++ A Y ++ K AA Sbjct: 218 GQKNYDDAVKEFDMVLEKYPDNNKTPEALLYKGRALVKMPGH---------KTD--GAAE 266 Query: 211 PRFQLVLANYSDAEHAEEA 229 F V+ + + A++A Sbjct: 267 --FMEVIRRFPKTDEAQQA 283 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 17/107 (15%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L +Q + ++ Y N+ A+ + + + Y A+ F +V Sbjct: 187 LAVQEFADYLKYYGNTDLAPNAQ--------------FYVAMIHYGQKNYDDAVKEFDMV 232 Query: 217 LANYSDAEHAEEAMARLVEAYVAL--ALMDEAREVVSLIQERYPQGY 261 L Y D EA+ A V + D A E + +I R+P+ Sbjct: 233 LEKYPDNNKTPEALLYKGRALVKMPGHKTDGAAEFMEVI-RRFPKTD 278 >gi|308186085|ref|YP_003930216.1| hypothetical protein Pvag_0562 [Pantoea vagans C9-1] gi|308056595|gb|ADO08767.1| Uncharacterized protein precursor [Pantoea vagans C9-1] Length = 264 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 47/137 (34%), Gaps = 9/137 (6%) Query: 50 SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + Y AV L+++ + +A + +P + + + Y+ G Sbjct: 136 APAQTGDANSDYNAAVALILEKKQYDQAISALQAWVKRYPDSTYQPNANYWLGQLNYNKG 195 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 K AA + YP+S VG+ + +++ T ++++ Sbjct: 196 KKDDAAYYYATVVKNYPKSPKAAEALLKVGV--------IMQEKKDTAKAKAVFQQVIKL 247 Query: 169 YTNSPYVKGARFYVTVG 185 Y ++ K A+ + Sbjct: 248 YPDTESAKQAQKRLASL 264 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 45/127 (35%), Gaps = 22/127 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y QA S + ++ +YP+S Y +G + Y + +V+ Sbjct: 158 KQYDQAISALQAWVKRYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYYATVVK 209 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SP A V V ++ + A FQ V+ Y D E A+ Sbjct: 210 NYPKSPKAAEALLKVGVIMQ--------------EKKDTAKAKAVFQQVIKLYPDTESAK 255 Query: 228 EAMARLV 234 +A RL Sbjct: 256 QAQKRLA 262 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ +Y AI Q + Y D+ + A L + D+A + + + YP+ Sbjct: 155 LEKKQYDQAISALQAWVKRYPDSTYQPNANYWLGQLNYNKGKKDDAAYYYATVVKNYPKS 214 Query: 261 YWARYVETLVK 271 + E L+K Sbjct: 215 --PKAAEALLK 223 >gi|163783489|ref|ZP_02178480.1| hypothetical protein HG1285_08749 [Hydrogenivirga sp. 128-5-R1-1] gi|159881253|gb|EDP74766.1| hypothetical protein HG1285_08749 [Hydrogenivirga sp. 128-5-R1-1] Length = 850 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 17/143 (11%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E+Y + F E + +A YF + K+LL A Y+ G Y++A L Sbjct: 494 EEIYLMGMSFFIEGKYREAIAYFKRLLDR---GEFKSKALLRIADSYYNLGNYERAKELY 550 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 +E +T YP+S + ++ ++ Q+ TK + + + ++ SP + Sbjct: 551 KEILTFYPDSTEAFDAT--LALAQIEL-------QKPTKDLEKLVRDFERKFPGSPMITD 601 Query: 178 -----ARFYVTVGRNQLAAKEVE 195 A Y+ GR A + +E Sbjct: 602 LKYQLANLYIKEGRRSEARRILE 624 Score = 40.1 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 67/207 (32%), Gaps = 43/207 (20%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y KA+ +S+ + KS L+ A + +L ++ Sbjct: 440 YHKALALFNAGRYSEVIKVLKGKEDL--------KSRLLKA----KSAISIGNGALARKF 487 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +T + YL+GMS+ + + + Y R+++R + A Sbjct: 488 LT-----EESGEEIYLMGMSFF--------IEGKYREAIAYFKRLLDR---GEFKSKALL 531 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 I Y G Y A ++ +L Y D+ A +A L + + Sbjct: 532 R--------------IADSYYNLGNYERAKELYKEILTFYPDSTEAFDATLALAQIELQK 577 Query: 241 ALMDEAREVVSLIQERYPQGYWARYVE 267 D ++V + ++P ++ Sbjct: 578 PTKDL-EKLVRDFERKFPGSPMITDLK 603 >gi|254253148|ref|ZP_04946466.1| hypothetical protein BDAG_02400 [Burkholderia dolosa AUO158] gi|124895757|gb|EAY69637.1| hypothetical protein BDAG_02400 [Burkholderia dolosa AUO158] Length = 307 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T + + A + NF A F +P + + QY+ Sbjct: 179 EGTVQPGETDALSAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRD 238 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ + + + +++YP+ +G + Q+A + ++V +Y Sbjct: 239 YRGSTATWQAIVSKYPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFEQVVSQY 290 Query: 170 TNSPYVKGARFYVTVGR 186 S + A+ + + Sbjct: 291 AGSNAAQTAQGKLETIK 307 Score = 42.0 bits (98), Expect = 0.090, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 35/109 (32%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y SPY A++++ A + +Y + Sbjct: 200 GNFKAAAASFRSFIAKYPQSPYQPTAQYWLGN-----AQYAL---------RDYRGSTAT 245 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q +++ Y A +A+ + + A++ + +Y Sbjct: 246 WQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 294 Score = 39.3 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 25/66 (37%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + + G + AA F+ +A Y + + A L A AL + I Sbjct: 190 LSAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQAI 249 Query: 254 QERYPQ 259 +YPQ Sbjct: 250 VSKYPQ 255 >gi|194366889|ref|YP_002029499.1| tol-pal system protein YbgF [Stenotrophomonas maltophilia R551-3] gi|194349693|gb|ACF52816.1| tol-pal system protein YbgF [Stenotrophomonas maltophilia R551-3] Length = 272 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 46/137 (33%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S+ +R Y A LK + + + F + +P A +L Y+ Sbjct: 138 SLAATGDERTTYNVAFDSLKAGKYDDSAQLFLSFLQLYPNGVYAPNALYWLGESYYATRN 197 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + E +++YP VG+S + Q + +V +Y Sbjct: 198 FPMAETQFRELLSRYPTHDKAAGGLLKVGLSQY--------GEGKVDQAQQTLETVVAQY 249 Query: 170 TNSPYVKGARFYVTVGR 186 S + A+ + R Sbjct: 250 PGSDAARTAQDRLQSIR 266 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q ++ Y N Y A +++ G Y + A +F+ + Sbjct: 163 DSAQLFLSFLQLYPNGVYAPNALYWL--------------GESYYATRNFPMAETQFREL 208 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 L+ Y + A + ++ + +D+A++ + + +YP AR + ++ Sbjct: 209 LSRYPTHDKAAGGLLKVGLSQYGEGKVDQAQQTLETVVAQYPGSDAARTAQDRLQ 263 >gi|172059752|ref|YP_001807404.1| tol-pal system protein YbgF [Burkholderia ambifaria MC40-6] gi|171992269|gb|ACB63188.1| tol-pal system protein YbgF [Burkholderia ambifaria MC40-6] Length = 249 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T + + A + NF A F +P + + QY+ Sbjct: 121 EGTVQPGETDALSAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRD 180 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ + + + +++YP+ +G + Q+A + ++V +Y Sbjct: 181 YRGSTATWQAIVSKYPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFEQVVSQY 232 Query: 170 TNSPYVKGARFYVTVGR 186 S + A+ + + Sbjct: 233 AGSNAAQTAQGKIESIK 249 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 35/109 (32%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y SPY A++++ A + +Y + Sbjct: 142 GNFKAAAASFRSFIAKYPQSPYQPTAQYWLGN-----AQYAL---------RDYRGSTAT 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q +++ Y A +A+ + + A++ + +Y Sbjct: 188 WQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 236 Score = 39.3 bits (91), Expect = 0.56, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 25/66 (37%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + + G + AA F+ +A Y + + A L A AL + I Sbjct: 132 LSAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQAI 191 Query: 254 QERYPQ 259 +YPQ Sbjct: 192 VSKYPQ 197 >gi|292490343|ref|YP_003525782.1| tol-pal system protein YbgF [Nitrosococcus halophilus Nc4] gi|291578938|gb|ADE13395.1| tol-pal system protein YbgF [Nitrosococcus halophilus Nc4] Length = 254 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 51/149 (34%), Gaps = 10/149 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + + +DS D Y+ A+ LKE + +A F Q + +P + + Sbjct: 112 PSEMTEAGTMDSAPDSGEPA--YQAALKLLKEGRYEEAMAAFRQFPQQYPESRYRPNAQY 169 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 Y + AA + QYPES V G++Y ++ + Sbjct: 170 WLGESYYMLRDFSAAAQAFQALAEQYPESAKVPDAMLKQGLAYYEL--------EQWEQA 221 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRN 187 + ++ RY S + A + + Sbjct: 222 KAQLQEVMARYPASTVSRLAEDRLEKMKR 250 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 14/116 (12%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + + + ++Y S Y A++++ G Y ++ AA FQ Sbjct: 145 EEAMAAFRQFPQQYPESRYRPNAQYWL--------------GESYYMLRDFSAAAQAFQA 190 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + Y ++ +AM + AY L ++A+ + + RYP +R E ++ Sbjct: 191 LAEQYPESAKVPDAMLKQGLAYYELEQWEQAKAQLQEVMARYPASTVSRLAEDRLE 246 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 56/149 (37%), Gaps = 29/149 (19%) Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 A ++ L G+Y++A + ++ QYPES+ Y +G SY + Sbjct: 128 GEPAYQAALKLL----KEGRYEEAMAAFRQFPQQYPESRYRPNAQYWLGESYYML----- 178 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 R Q + E+Y S V A + + LA E+ ++ A Sbjct: 179 ---RDFSAAAQAFQALAEQYPESAKVPDA-----MLKQGLAYYEL---------EQWEQA 221 Query: 210 IPRFQLVLANYSDAEH---AEEAMARLVE 235 + Q V+A Y + AE+ + ++ Sbjct: 222 KAQLQEVMARYPASTVSRLAEDRLEKMKR 250 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 LK G Y A+ F+ Y ++ + A L E+Y L A + + E+YP+ Sbjct: 139 LKEGRYEEAMAAFRQFPQQYPESRYRPNAQYWLGESYYMLRDFSAAAQAFQALAEQYPES 198 Query: 261 YWARYVETLVK 271 A+ + ++K Sbjct: 199 --AKVPDAMLK 207 >gi|115350729|ref|YP_772568.1| hypothetical protein Bamb_0675 [Burkholderia ambifaria AMMD] gi|115280717|gb|ABI86234.1| conserved hypothetical protein [Burkholderia ambifaria AMMD] Length = 249 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T + + A + NF A F +P + + QY+ Sbjct: 121 EGTVQPGETDALNAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRD 180 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ + + + +++YP+ +G + Q+A + ++V +Y Sbjct: 181 YRGSTATWQTVVSKYPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFEQVVSQY 232 Query: 170 TNSPYVKGARFYVTVGR 186 S + A+ + + Sbjct: 233 AGSNAAQTAQGKIESIK 249 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 35/109 (32%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y SPY A++++ A + +Y + Sbjct: 142 GNFKAAAASFRSFIAKYPQSPYQPTAQYWLGN-----AQYAL---------RDYRGSTAT 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q V++ Y A +A+ + + A++ + +Y Sbjct: 188 WQTVVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 236 Score = 38.9 bits (90), Expect = 0.83, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 25/66 (37%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + + G + AA F+ +A Y + + A L A AL + + Sbjct: 132 LNAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQTV 191 Query: 254 QERYPQ 259 +YPQ Sbjct: 192 VSKYPQ 197 >gi|218264397|ref|ZP_03478254.1| hypothetical protein PRABACTJOHN_03950 [Parabacteroides johnsonii DSM 18315] gi|218222035|gb|EEC94685.1| hypothetical protein PRABACTJOHN_03950 [Parabacteroides johnsonii DSM 18315] Length = 999 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 65/218 (29%), Gaps = 36/218 (16%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-------YSAG 108 Y Y + K +++S A F R + +++ A Y Sbjct: 504 YALAYYNLGYSYFKLRDYSAALNRF----RQYVDLESNQQAA-SLADAYNRIGDCLYQNR 558 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 ++ A P DY Y G Q+ + + M R++ Sbjct: 559 QFSLAEENYSRAAQLSPS--AGDYSIYQKGFLLGL--------QKDYRGKISAMDRLISE 608 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y S YV A E GR Y+ +A F+ ++ + + A + Sbjct: 609 YPESQYVDDAL--------------FEKGRSYVLLENSSSAAQAFEKLIREFPQSSLARK 654 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 A +L Y ++A + YP A+ Sbjct: 655 AGIQLGLLYYNDNQPEKALTAYKQVISNYPGSEEAKIA 692 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 95/258 (36%), Gaps = 52/258 (20%) Query: 39 ERQSSRDVYLDSVTDVRY-QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 + S+ D + + +Y ++EK ++ +N S A + F + R+FP + +ARK+ Sbjct: 597 GKISAMDRLISEYPESQYVDDALFEKGRSYVLLENSSSAAQAFEKLIREFPQSSLARKAG 656 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNV------------------DYVYYL--V 137 + + Y+ + ++A + ++ I+ YP S+ Y Y+ + Sbjct: 657 IQLGLLYYNDNQPEKALTAYKQVISNYPGSEEAKIALQDLKSVYIDLNDINAYASYVNSI 716 Query: 138 G------------MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 G ++Y + + + ++ + + A FY+ Sbjct: 717 GGNIRLEVGEQDSLTYIAAEKLFMR--GDNDGARRSLVNYLQTFPEGAFSSNANFYLGSI 774 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 A KE + A+ RF+ V+A+ D + EE++AR E Sbjct: 775 --AFAKKEFD------------EAVQRFKSVIAS-GDTKFLEESVARTAEIEYLGNDYPA 819 Query: 246 AREVVSLIQ--ERYPQGY 261 A E +Q P+ Sbjct: 820 ALESFKRLQIVAENPENK 837 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 77/234 (32%), Gaps = 36/234 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGE 118 +++ + A F++ + + AR + Y G+Y+ A S Sbjct: 431 LFQLGTQAFANVKLNDAVSLFSRAIQLGSYNMEARNDAYFWRGESYYRMGEYENAISDYR 490 Query: 119 EYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 Y+ +N D YY +G SY ++ R L + V+ +N Sbjct: 491 TYLN-NTRQRNTDMYALAYYNLGYSYFKL--------RDYSAALNRFRQYVDLESNQQAA 541 Query: 176 --KGARFYVTVG-------------RNQLAAKEVEIGRY--YLK------RGEYVAAIPR 212 A + ++ A G Y Y K + +Y I Sbjct: 542 SLADAYNRIGDCLYQNRQFSLAEENYSRAAQLSPSAGDYSIYQKGFLLGLQKDYRGKISA 601 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 +++ Y ++++ ++A+ +YV L A + + +PQ AR Sbjct: 602 MDRLISEYPESQYVDDALFEKGRSYVLLENSSSAAQAFEKLIREFPQSSLARKA 655 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 38/273 (13%), Positives = 94/273 (34%), Gaps = 57/273 (20%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 I +C +VG + Y D ++ + +N++ + + Sbjct: 4 ILIPLCIVVGSHVAYGQRSYQFDAPDR-----LFVEGKELFSLKNYAGCIDKLEAYKQHS 58 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--- 144 A + +++ M + Y G+ A L ++Y+ +YP S++ D + Y++G + + Sbjct: 59 TDADLIQEADYMLVYAAYEQGR-PNADELLKDYLEEYPASRHSDEIGYMIGSVHFERGEY 117 Query: 145 -----------IRDVPYDQRAT---------------KLMLQYMSRIVERYTNSPYVKGA 178 I + +Q+ + Y +RI + Y + + Sbjct: 118 EKAIFWFNEADIDMLSPEQQEAYSFRLAYSLLQTGEMEKARGYFARIEQI--GDKYKEAS 175 Query: 179 RFYVTVGRNQLAAK--------------------EVEIGRYYLKRGEYVAAIPRFQLVLA 218 +YV + + I + Y + +Y + + +L+ Sbjct: 176 TYYVAYIDYAMGNYNNALIEFSRLKESPKYREQSQYYIAQIYFIQSKYEKVVKEGEELLS 235 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 Y +++ E + ++Y L +A +++S Sbjct: 236 LYPGSKNNSEMFRIVGDSYYHLGDQGKAIQMLS 268 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 74/201 (36%), Gaps = 31/201 (15%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 ++ + D + Y A + N++ A F++ +S A + + Sbjct: 164 IEQIGDKYKEASTYYVAYIDYAMGNYNNALIEFSRLKES---PKYREQSQYYIAQIYFIQ 220 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 KY++ GEE ++ YP SKN ++ +VG SY + +Q + Sbjct: 221 SKYEKVVKEGEELLSLYPGSKNNSEMFRIVGDSYYHLGDQ--------GKAIQML----- 267 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 S YV + ++ I G Y +G Y +A+ + + E Sbjct: 268 ----SKYVSSTENPL--------RSDLYILGVCYFNKGNYSSAVNALSRTVR--QNDELT 313 Query: 227 EEAMARLVEAYVALALMDEAR 247 + A L ++Y+ L + AR Sbjct: 314 QNAYLYLGQSYLKLGDKNNAR 334 Score = 43.2 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 50/170 (29%), Gaps = 38/170 (22%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S T+ + ++Y V + + N+S A ++ R + + + L G Sbjct: 272 SSTENPLRSDLYILGVCYFNKGNYSSAVNALSRTVRQN--DELTQNAYLYLGQSYLKLGD 329 Query: 110 Y--------QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 A S ++ I + Y +YA +I + + + Sbjct: 330 KNNARMAFEAAATSSFDKQIK--------EVAMY----NYALLIHETAF--TGFGESVTI 375 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + NS Y Y+ YL Y AA+ Sbjct: 376 FEDFLNDFPNSQYADKVNDYLVEV--------------YLTTKNYEAALK 411 >gi|171321508|ref|ZP_02910449.1| tol-pal system protein YbgF [Burkholderia ambifaria MEX-5] gi|171093216|gb|EDT38423.1| tol-pal system protein YbgF [Burkholderia ambifaria MEX-5] Length = 249 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T + + A + NF A F +P + + QY+ Sbjct: 121 EGTVQPGETDALSAAQQQFRNGNFKAAAASFRGFIAKYPQSPYQPTAQYWLGNAQYALRD 180 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ + + + +++YP+ +G + Q+A + ++V +Y Sbjct: 181 YRGSTATWQAIVSKYPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFEQVVSQY 232 Query: 170 TNSPYVKGARFYVTVGR 186 S + A+ + + Sbjct: 233 AGSNAAQTAQGKIESIK 249 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 35/109 (32%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y SPY A++++ A + +Y + Sbjct: 142 GNFKAAAASFRGFIAKYPQSPYQPTAQYWLGN-----AQYAL---------RDYRGSTAT 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q +++ Y A +A+ + + A++ + +Y Sbjct: 188 WQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 236 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 25/66 (37%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + + G + AA F+ +A Y + + A L A AL + I Sbjct: 132 LSAAQQQFRNGNFKAAAASFRGFIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQAI 191 Query: 254 QERYPQ 259 +YPQ Sbjct: 192 VSKYPQ 197 >gi|166712981|ref|ZP_02244188.1| hypothetical protein Xoryp_16440 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 272 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 43/130 (33%), Gaps = 8/130 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +R Y A LK + A + F +P +L Y+ +Q A + Sbjct: 145 ERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQ 204 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + +++YP +G+S ++ Q + + +Y S + Sbjct: 205 FRDLVSRYPTHDKAAGGLLKLGLSQYGEGKN--------NEAQQTLQHVASQYPGSDAAR 256 Query: 177 GARFYVTVGR 186 A+ + R Sbjct: 257 VAQERLQSIR 266 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q +E Y N Y A +++ G Y + A +F+ + Sbjct: 163 DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 208 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++ Y + A + +L + +EA++ + + +YP AR + ++ Sbjct: 209 VSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQQTLQHVASQYPGSDAARVAQERLQ 263 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 23/58 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 LK G+Y A F L Y + + A+ L E+Y A A + RYP Sbjct: 156 LKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 213 >gi|237756217|ref|ZP_04584781.1| Tetratricopeptide repeat family protein [Sulfurihydrogenibium yellowstonense SS-5] gi|237691627|gb|EEP60671.1| Tetratricopeptide repeat family protein [Sulfurihydrogenibium yellowstonense SS-5] Length = 964 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 44/221 (19%), Positives = 88/221 (39%), Gaps = 31/221 (14%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110 D+ ++ Y A F +F +A + F++ + RK+LL A Y+ G+ Sbjct: 589 DLIAKKAYYLYAYTFFSSGDFVRASQEFSKFLEKYKNDDDIYTRKALLRLADSYYNLGER 648 Query: 111 QQAASLGEEYITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 A ++ +++IT+Y +K+ +D Y L+ + DV + + +Y Sbjct: 649 DLAVNIYKDFITKYSGTKDSIDAAYNLIILESKGSSEDVE----------SMIKSFLTKY 698 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 P + + Y +G+ AI +Q V A +++ + A Sbjct: 699 PKYPLANILKIQLAEI--------------YQNKGKIENAIKIYQEVAAV--NSKESALA 742 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 +L E+Y L +D+A++V LI + + L+ Sbjct: 743 TYKLAESYYKLNQLDKAKQV--LIDYLNTNNEEYKLLSKLL 781 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 15/155 (9%) Query: 40 RQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +Q+ D + +++ +V ++ A + L++ ++ KA YF + P + Sbjct: 788 KQNDLDNSIKIYEELKENDDVKFKLAKILLQKGDYDKALTYFKELLEKHP--EKVNEISF 845 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 Y + A S E + YYL+GM Y + Sbjct: 846 YIGKTYYLMNDKKDAVSYLENGTKS-SNYNDAAVSYYLLGMIYNK---------ENPNKA 895 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQL-AAK 192 L Y + Y +S + A+ + + L A K Sbjct: 896 LNYFLNGIYLYPSSKDIT-AKSRIEAAKILLKAEK 929 Score = 42.4 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 27/49 (55%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +LL A Y+ G A S E++I +Y + KN+ Y YYL+G+ + Sbjct: 139 ALLSDAIDYYNKGDLLFAESNLEKFIEKYKDHKNLFYAYYLLGVVKYNL 187 >gi|255531080|ref|YP_003091452.1| tetratricopeptide domain-containing protein [Pedobacter heparinus DSM 2366] gi|255344064|gb|ACU03390.1| Tetratricopeptide domain protein [Pedobacter heparinus DSM 2366] Length = 1005 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 66/211 (31%), Gaps = 33/211 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-----SLLMSAFVQYSAGKYQQAAS 115 Y A +++ + KA YF F + + + A + Y A Sbjct: 518 YALAYSAFEDEKYGKAALYFE----RFLKGNDKDQKTVNDATIRLADSYFVNKSYGNALV 573 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 I + DY + GM I+ + Q K + M +++++ NS Y Sbjct: 574 NYNRIIDSKASGE--DYALFQRGM-----IQGLDN-QNDAK--INTMQNLLKQFPNSNYA 623 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 A F + Y +GE + +++ Y ++ + A+ + Sbjct: 624 DDAGFEMAYT--------------YFNKGELDKSKSDLISLVSQYPNSSYVPRALVTIGL 669 Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYV 266 D A E + YP A+ Sbjct: 670 VQYNQDQDDAALESFKKVIRDYPSTEEAKQA 700 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 72/232 (31%), Gaps = 42/232 (18%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++++ ++ + + FP + A + A+ ++ G+ ++ S Sbjct: 590 LFQRGMIQGLDNQNDAKINTMQNLLKQFPNSNYADDAGFEMAYTYFNKGELDKSKSDLIS 649 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 ++QYP S V +G+ +D L+ +++ Y ++ K A Sbjct: 650 LVSQYPNSSYVPRALVTIGLVQYNQDQD--------DAALESFKKVIRDYPSTEEAKQAL 701 Query: 180 FYVTVGRNQLAAKEVEI--------GRY----------------YLKRGEYVA--AIPRF 213 + + I G Y YLK A AI + Sbjct: 702 ESIKNIYVDKGDSQGFINYAGTTPLGNYSNAEQDNILFQGANNLYLKGDAKGAFEAINAY 761 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 + A H +EA E+ V L +EA + Y W Sbjct: 762 ---FDKFPKAIHDKEAKFIRAESLVKLGRPNEA-----VPDYEYILNDWTSD 805 Score = 45.1 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 71/217 (32%), Gaps = 51/217 (23%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRD--------FPFAGVARKSLLMSAFVQYSAGKYQQ 112 Y KA + + F +A +F + FA A A+ + KY + Sbjct: 479 YWKAEACYELRKFGEAVRHFETFLDMPGASKTGVYNFANYA------LAYSAFEDEKYGK 532 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 AA E ++ DQ+ ++ + N Sbjct: 533 AALYFERFLK------------------------GNDKDQKTVNDATIRLAD--SYFVNK 566 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG-------EYVAAIPRFQLVLANYSDAEH 225 Y Y + ++ + ++ + +RG + A I Q +L + ++ + Sbjct: 567 SYGNALVNYNRIIDSKASGEDYAL----FQRGMIQGLDNQNDAKINTMQNLLKQFPNSNY 622 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 A++A + Y +D+++ + + +YP + Sbjct: 623 ADDAGFEMAYTYFNKGELDKSKSDLISLVSQYPNSSY 659 Score = 42.8 bits (100), Expect = 0.049, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 50/157 (31%), Gaps = 30/157 (19%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K L I +A F G+ + S + Y+ + L + + A + Sbjct: 1 MSKKYLFIPLLLAGGFTAGYAQTSVLVNLNKN----------YQTGLELLDNEKYVAAAQ 50 Query: 79 YFNQCS--RDFPFAGVARKSLLMS---------AFVQYSAGKYQQAASLGEEYITQYPES 127 F R P + L A G A SL + +I YP + Sbjct: 51 QFRLVEQLRQKPGTQQESNAELSMLKENAKFYAAVCALELGNSD-AESLFQNFIKDYPLN 109 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 N Y+ VG SY Q+ + L++ + Sbjct: 110 PNTKLAYFHVGKSYFA--------QKNYQKALEWFEK 138 >gi|198282219|ref|YP_002218540.1| tol-pal system protein YbgF [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666817|ref|YP_002424584.1| hypothetical protein AFE_0070 [Acidithiobacillus ferrooxidans ATCC 23270] gi|198246740|gb|ACH82333.1| tol-pal system protein YbgF [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519030|gb|ACK79616.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 272 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 15/135 (11%) Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 +G + Q D+ Q + + +++Y S V A +++ + L + Sbjct: 147 LGQADYQRAFDLLR-QGKYGSAVTGLQGFIQKYPQSSLVPDAYYWLGQAQYVLGQND--- 202 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 AA+ +V A +S + A EAM R+ E Y A+ +AR V+S I + Sbjct: 203 -----------AALKSLHVVEAQFSQSSKAPEAMLRMAEIYQAIGQSGKARTVLSKIISQ 251 Query: 257 YPQGYWARYVETLVK 271 YP A+ E ++ Sbjct: 252 YPSTPSAQKAEAQLQ 266 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 48/135 (35%), Gaps = 22/135 (16%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 ++ AF GKY A + + +I +YP+S V YY +G + + ++ Sbjct: 149 QADYQRAFDLLRQGKYGSAVTGLQGFIQKYPQSSLVPDAYYWLGQAQYVLGQN------- 201 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 L+ + + +++ S A + Y G+ A Sbjct: 202 -DAALKSLHVVEAQFSQSSKAPEAMLRMAEI--------------YQAIGQSGKARTVLS 246 Query: 215 LVLANYSDAEHAEEA 229 +++ Y A++A Sbjct: 247 KIISQYPSTPSAQKA 261 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 41/125 (32%), Gaps = 8/125 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y++A L++ + A + +P + + + QY G+ A Sbjct: 152 YQRAFDLLRQGKYGSAVTGLQGFIQKYPQSSLVPDAYYWLGQAQYVLGQNDAALKSLHVV 211 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 Q+ +S + Y + + +S+I+ +Y ++P + A Sbjct: 212 EAQFSQSSKAPEAMLRMAEIYQAI--------GQSGKARTVLSKIISQYPSTPSAQKAEA 263 Query: 181 YVTVG 185 + Sbjct: 264 QLQAL 268 >gi|325981316|ref|YP_004293718.1| tol-pal system protein YbgF [Nitrosomonas sp. AL212] gi|325530835|gb|ADZ25556.1| tol-pal system protein YbgF [Nitrosomonas sp. AL212] Length = 300 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 53/146 (36%), Gaps = 8/146 (5%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 S + + Y++A K ++ F ++P + +A + Sbjct: 163 DSGSLSVNELAPPGPAENAAYKEAYDSFKNGEYANTIAQFENFLENYPQSTLAPGAAYWI 222 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 +Y+ YQ A ++ I++YP+S V + S +M D+ A + L+ Sbjct: 223 GNARYALRDYQLAIDAQKKLISKYPDSNKVPDALLNIATSQFEMG-----DRNAGRKTLE 277 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGR 186 ++ + +S A+ + + Sbjct: 278 N---LLLSHPHSEAAGKAKQRLANIK 300 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 36/103 (34%), Gaps = 14/103 (13%) Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + +E Y S GA +++ R L +Y AI + +++ Sbjct: 199 IAQFENFLENYPQSTLAPGAAYWIGNARYAL--------------RDYQLAIDAQKKLIS 244 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y D+ +A+ + + + + R+ + + +P Sbjct: 245 KYPDSNKVPDALLNIATSQFEMGDRNAGRKTLENLLLSHPHSE 287 Score = 42.8 bits (100), Expect = 0.049, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 24/61 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 K GEY I +F+ L NY + A A + A AL A + + +YP Sbjct: 190 FKNGEYANTIAQFENFLENYPQSTLAPGAAYWIGNARYALRDYQLAIDAQKKLISKYPDS 249 Query: 261 Y 261 Sbjct: 250 N 250 >gi|218778517|ref|YP_002429835.1| hypothetical protein Dalk_0662 [Desulfatibacillum alkenivorans AK-01] gi|218759901|gb|ACL02367.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans AK-01] Length = 876 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 35/287 (12%), Positives = 86/287 (29%), Gaps = 59/287 (20%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 G + + ++ ++++ KAV K + A F+ + +P + Sbjct: 221 ATAGHDFSYDGPLLSEANGSGTPDQDLFSKAVEEYKTGQWQDAIRDFSILEQSYPLSEKL 280 Query: 94 RKSLLMSAFVQY------SAGKYQQAASLGEEYITQYPESKNVDYVY-YLV--------- 137 + ++A + ++ A + Q+P S+ YLV Sbjct: 281 EPAAFLTARAYHGLYGANLTKRFVDVAEKYRRAVKQFPNSRFAPQAIVYLVQMYKKVGNY 340 Query: 138 --GMSYAQMIRDVPYDQRAT-----------------KLMLQYMSRIVERYTNSPYVK-- 176 +YA ++ D D+ + L L ++ Y +S YV+ Sbjct: 341 PEAAAYADLVWDKYKDRAMSPDFMLLRGQALLANGQKDLALGVFDMLLGYYPDSEYVEAT 400 Query: 177 ---------------GARFYVTVG--RNQLAAKEV-----EIGRYYLKRGEYVAAIPRFQ 214 + + ++ A +G Y + A F Sbjct: 401 LLEKAKVMHEERAYKKSLEMLQEIEKKDPQARFIYPDFSRYMGENYYQLKANPKARELFF 460 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + D + ++ +++ + D+A + ++ +P Sbjct: 461 QTVNTFPDTPDKDILFTKIGDSFKDQGMQDKAAMIYKMVVSNFPGSD 507 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 38/259 (14%), Positives = 78/259 (30%), Gaps = 46/259 (17%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAF 102 D D V + ++ A + + S A + SR + + + +M A Sbjct: 620 DKVRDVVPFEEMPQLMFIVANAYRETGMCSWALTQLEKVSRFY---DDPKPADIMFIMAD 676 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 G+ + A L E ++ QYP Y+ + D+ ++ T +Q + Sbjct: 677 CNKKVGEIENARRLFETFVLQYPGEPRFVEAYHQLA--------DIYLERGETDPAIQAL 728 Query: 163 SRIVERYTNSPYVKGARFYVTVGR----------------------------NQLAAKEV 194 + + Y + N AA ++ Sbjct: 729 RVCLR--PGTQYSDDFNLMFQYAKLLKNKGEYQDAVEAFNKAVDLVMKSDPPNTQAAVDI 786 Query: 195 E--IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 + IG Y + A+ F+ L +L Y +L A E++ Sbjct: 787 QEGIGDLYEEMELTSKAVKHFEQALELSGGPNSYPALQFKLARCYASLGEAARAMEILES 846 Query: 253 IQERYPQGYWARYVETLVK 271 + + WA+ + ++ Sbjct: 847 LARSG-ENVWAKAAKAKLE 864 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 64/215 (29%), Gaps = 33/215 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGV------ARKSLLMSAFV-QYSAGKYQQAASL 116 A L E+ + + PF + A + L + F + + Sbjct: 559 ARLAHDEKRYEDSVSILLGLLARHPFTKLHDDVREALLASLEAIFTRDHREKDFAHIVEY 618 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 ++ P + + + ++V +Y + L + ++ Y + P Sbjct: 619 YDKVRDVVP-FEEMPQLMFIVANAY--------RETGMCSWALTQLEKVSRFY-DDPKPA 668 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 F + ++ E+E R F+ + Y EA +L + Sbjct: 669 DIMFIMADCNKKVG--EIENAR------------RLFETFVLQYPGEPRFVEAYHQLADI 714 Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Y+ D A + + + P ++ + + Sbjct: 715 YLERGETDPAIQALRVCLR--PGTQYSDDFNLMFQ 747 >gi|307728549|ref|YP_003905773.1| tol-pal system protein YbgF [Burkholderia sp. CCGE1003] gi|307583084|gb|ADN56482.1| tol-pal system protein YbgF [Burkholderia sp. CCGE1003] Length = 249 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 48/132 (36%), Gaps = 8/132 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + + A + +F A F FP + + QY+ Y+ + Sbjct: 126 PGETDAFNAASQQFRNGDFKSAAASFRSFIAKFPNSPYQPTAQYWLGNAQYALRDYKGST 185 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + + + YP+ L+ ++ Q + Q+A + + +IV +Y S Sbjct: 186 ATWQGVVKNYPQHPRAPEA--LLAIANNQ----IEQGQKAA--AKKTLEQIVAQYGGSNV 237 Query: 175 VKGARFYVTVGR 186 + A+ ++ + Sbjct: 238 AQSAQSKLSQIK 249 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 37/109 (33%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + ++ NSPY A++++ A + +Y + Sbjct: 142 GDFKSAAASFRSFIAKFPNSPYQPTAQYWLGN-----AQYAL---------RDYKGSTAT 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q V+ NY A EA+ + + A++ + I +Y Sbjct: 188 WQGVVKNYPQHPRAPEALLAIANNQIEQGQKAAAKKTLEQIVAQYGGSN 236 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 25/59 (42%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + G++ +A F+ +A + ++ + A L A AL + + + YPQ Sbjct: 139 FRNGDFKSAAASFRSFIAKFPNSPYQPTAQYWLGNAQYALRDYKGSTATWQGVVKNYPQ 197 >gi|189426318|ref|YP_001953495.1| tol-pal system protein YbgF [Geobacter lovleyi SZ] gi|189422577|gb|ACD96975.1| tol-pal system protein YbgF [Geobacter lovleyi SZ] Length = 248 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 42/146 (28%), Gaps = 10/146 (6%) Query: 39 ERQSSRDVYLDSVTDVRY--QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 V D V R Y KA NF+ A + F ++ P + + Sbjct: 100 ATSKVEVVNPDPVPKGRDAGPPPAYVKAFGLYSTNNFATAIQAFELFIKELPASEYVPNA 159 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 YS+ A ++ + +P +G SY Q+ Sbjct: 160 YYWIGECYYSSSDLPNAHVAFQKVVDGWPRHSKAADALLKIGYSYLA--------QKQQD 211 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYV 182 R++ Y SP AR + Sbjct: 212 KAKSSFERLIRSYPGSPAAVKARERL 237 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 45/136 (33%), Gaps = 22/136 (16%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 AF YS + A E +I + P S+ V YY +G Y Sbjct: 127 AFGLYSTNNFATAIQAFELFIKELPASEYVPNAYYWIGECYYSSSDLPN--------AHV 178 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 ++V+ + A + YL + + A F+ ++ +Y Sbjct: 179 AFQKVVDGWPRHSKAADALLKIGYS--------------YLAQKQQDKAKSSFERLIRSY 224 Query: 221 SDAEHAEEAMARLVEA 236 + A +A RL+ + Sbjct: 225 PGSPAAVKARERLMSS 240 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 +Q ++ S YV A +++ YY A + FQ V+ Sbjct: 139 AIQAFELFIKELPASEYVPNAYYWIGEC-------------YYSSSDLPNAHVA-FQKVV 184 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + A +A+ ++ +Y+A D+A+ + YP Sbjct: 185 DGWPRHSKAADALLKIGYSYLAQKQQDKAKSSFERLIRSYPGSP 228 Score = 42.4 bits (99), Expect = 0.063, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 29/104 (27%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 F + Q+ + Y + + A+ F + Sbjct: 127 AFGLYSTNNFATAIQAFELFIKELPASEYVPNAYYWIGECYYSSSDLPNAHVAFQKVVDG 186 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 +P A +LL + + + +A S E I YP S Sbjct: 187 WPRHSKAADALLKIGYSYLAQKQQDKAKSSFERLIRSYPGSPAA 230 >gi|265754620|ref|ZP_06089672.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|263234734|gb|EEZ20302.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 967 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 46/222 (20%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D +YE+ F++ ++ + A FN + FP + VAR++ + Y Sbjct: 574 DYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESSVARRAANEIGLLYYQDD 633 Query: 109 KYQQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPY 150 KY +A ++ I YP S+ +Y + + Sbjct: 634 KYPEAIQAYKQVIASYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTIPGGANFDVNER 693 Query: 151 D------------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D + +R ++ + + A +Y+ + Sbjct: 694 DSLTYVAAERVYMRGEVTEARNSFTRYLQTFPEGAFSLNANYYIGLID------------ 741 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVA 239 + Y +A VL Y + +++E+AM E AY A Sbjct: 742 --YNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTA 780 Score = 62.4 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 74/214 (34%), Gaps = 26/214 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117 +Y + K++N+ A +F + A ++ + +++QA Sbjct: 474 LYNLGYTYFKQKNYGNAGTWFTRFVDRGSANERAMQADAYNRIGDCNFYDRRFEQARQDY 533 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P DY Y +R + D +Q ++R++ Y S Y+ Sbjct: 534 ARAVEIDPS--LGDYSLYQEA-----FVRGLQRD---YNGKVQTLNRLISDYPESQYMDD 583 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A E GR +++ + AI RF +++ + ++ A A + Y Sbjct: 584 AL--------------YEQGRAFVQMEDNANAIARFNILVKKFPESSVARRAANEIGLLY 629 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 EA + + YP AR + +K Sbjct: 630 YQDDKYPEAIQAYKQVIASYPGSEEARLAQRDLK 663 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 76/233 (32%), Gaps = 37/233 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y++A + +++++ + N+ D+P + +L A + Sbjct: 548 LYQEAFVRGLQRDYNGKVQTLNRLISDYPESQYMDDALYEQGRAFVQMEDNANAIARFNI 607 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + ++PES +G+ Y Q + +Q +++ Y S + A+ Sbjct: 608 LVKKFPESSVARRAANEIGLLYYQDDKYP--------EAIQAYKQVIASYPGSEEARLAQ 659 Query: 180 FYVTVGRNQL----------------AAKEV-------EIG--RYYLKRGEYVAAIPRFQ 214 + L A +V + R Y+ RGE A F Sbjct: 660 RDLKSIYIDLNKVDEYANFASTIPGGANFDVNERDSLTYVAAERVYM-RGEVTEARNSFT 718 Query: 215 LVLANYSDAEHAEEAMARLVEA-YVALALMDEAREVVSLIQERYPQGYWARYV 266 L + + + A + Y A AR + +++ YP ++ Sbjct: 719 RYLQTFPEGAFSLNANYYIGLIDYNQKAYESAARHLDKVLE--YPNNKYSEDA 769 Score = 40.1 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 75/248 (30%), Gaps = 52/248 (20%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + L + + C L G +Q + R RE K + E Sbjct: 1 MKRKTLLMAALMGGCSLQGMAQQITPKDVAGDKEYNRVCREYELKGGDSM---------E 51 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +P + + L + A + GKY++A +L Sbjct: 52 LLQAYLDKYPDSRHKNRVLSLIASAYFMEGKYKEAIALFRS------------------- 92 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL------AAK 192 + + D D A +L Y+ ++ A + T+ + A Sbjct: 93 -CDLEALPDKERDDCAMRLATSYLKE--------DNLREAAVWFTLLKEVSPLYQDDAVY 143 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM--ARLVEAYVALALMDEAREVV 250 + Y KR Y A+ FQ + + A+ + E Y+ +AR V Sbjct: 144 NLAYIDYVEKR--YDKALKSFQSLQND-----AVYAALVPYYIGEIYLVKGNYQQARTVA 196 Query: 251 SLIQERYP 258 E+YP Sbjct: 197 KAYLEQYP 204 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y ++ ++ + A + ++ +P + ++LM A + Y+A Y++A + ++ Sbjct: 735 YYIGLIDYNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQ 792 Score = 36.2 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 24/153 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +YE + + +SKA + + +++ + L + + +A E+ Sbjct: 248 LYELGMSYYYTGVYSKAVATLGEMASVH--DALSQNAYLHMGLAYLNLKERNRARMAFEQ 305 Query: 120 YITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + V + Y + + + R + + NSPY + Sbjct: 306 -AANFSFDPKVKEQALYNYALCIHETSYS------PFAESVTVFERFLNEFPNSPYTERV 358 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Y+ Y+ Y AA+ Sbjct: 359 NDYLIEV--------------YMNTRSYEAALK 377 >gi|53715697|ref|YP_101689.1| hypothetical protein BF4417 [Bacteroides fragilis YCH46] gi|52218562|dbj|BAD51155.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 1002 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 75/206 (36%), Gaps = 31/206 (15%) Query: 44 RDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSR-DFPFAGVA--RKSLLM 99 + + L+ + + Y + +L +NF +A Y++Q + P + + +L+ Sbjct: 533 KYISLEKGENKTALADAYNRIGDCYLDVRNFDEAKHYYSQAEAMNTPSGDYSFYQLALVS 592 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y +L +YP S Y G SY M + + + Sbjct: 593 G-----LQKDYSGKITLLNRLAGKYPASPYAISALYEKGRSYVLMDNN--------QQAI 639 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 ++ +Y SP + A EIG Y + +Y AI ++ V+ Sbjct: 640 ASFKELLAKYPESPVSRKAAA--------------EIGLLYYQNEDYDQAINAYKQVVQK 685 Query: 220 YSDAEHAEEAMARLVEAYVALALMDE 245 Y ++ A AM L YV + +DE Sbjct: 686 YPGSDEARLAMRDLKSIYVDMNRIDE 711 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 38/277 (13%), Positives = 77/277 (27%), Gaps = 60/277 (21%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K + ++A C V + Q+S + +Y++ ++N++ A Sbjct: 1 MKKKISRLICAVACCVPVALQAQTSEKI--------TSPVNLYKEGKELFLQKNYAAAMP 52 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 R + ++ M Y + A + Y+ YP++ + + +Y L+ Sbjct: 53 PLRTFVRQKADVNLKEEAEYMLVCSAYELKD-RNAIAQLRNYLDTYPDTPHANRIYALIA 111 Query: 139 MSYAQM-----------------IRDVPYDQ------------RATKLMLQYMSRIVERY 169 +Y + + D K + + Sbjct: 112 SAYFYQGNYDEALALFNSSRLDLLGNEERDDMTYQLATCYLKVGNVKEAAIWFETLKASS 171 Query: 170 TNSPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKRGEYVAA 209 Y +Y++ R + I Y + Y A Sbjct: 172 P--KYANDCSYYISYIRYTQKRYDEALKGFLPLQDDVKYKALVPYYIAEIYAVKKNYDKA 229 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 Q L+ Y EH E L +AY +A Sbjct: 230 QIVAQNYLSAYPQNEHVAEMYRILGDAYYHFGDYHKA 266 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 72/214 (33%), Gaps = 28/214 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y + ++++++A +F + + +A + + +A Sbjct: 512 YNLGYIAFHQKDYTQAQNWFRKYISLEKGENKTALA-DAYNRIGDCYLDVRNFDEAKHYY 570 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + + + DY +Y + + + ++R+ +Y SPY Sbjct: 571 SQAEAMN--TPSGDYSFYQLALVSGLQKDYSGK--------ITLLNRLAGKYPASPYAIS 620 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A E GR Y+ AI F+ +LA Y ++ + +A A + Y Sbjct: 621 AL--------------YEKGRSYVLMDNNQQAIASFKELLAKYPESPVSRKAAAEIGLLY 666 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 D+A + ++YP AR +K Sbjct: 667 YQNEDYDQAINAYKQVVQKYPGSDEARLAMRDLK 700 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 29/234 (12%), Positives = 73/234 (31%), Gaps = 36/234 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115 +++ F +A YF++ R++ + + Y + ++A Sbjct: 434 LFQLGTQAFANTQFEQAIGYFDRSLGL---GQYNRQTKADALYWRGEAYYRLNRMEEAKR 490 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV--ERYTNSP 173 +Y+ ++ N Y +++ + + + Q+ + + + E+ N Sbjct: 491 NFTDYLQLTQQTHNEMYA-----LAHYNL-GYIAFHQKDYTQAQNWFRKYISLEKGENKT 544 Query: 174 YVKGARFYVTVG----RNQ-LAAKEVEIGR----------YYL------KRGEYVAAIPR 212 + A + RN A +Y + +Y I Sbjct: 545 ALADAYNRIGDCYLDVRNFDEAKHYYSQAEAMNTPSGDYSFYQLALVSGLQKDYSGKITL 604 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 + Y + +A A+ +YV + +A + +YP+ +R Sbjct: 605 LNRLAGKYPASPYAISALYEKGRSYVLMDNNQQAIASFKELLAKYPESPVSRKA 658 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 64/212 (30%), Gaps = 28/212 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A ++ ++N+ KA +P + + Y G Y +A + Y Sbjct: 214 YYIAEIYAVKKNYDKAQIVAQNYLSAYPQNEHVAEMYRILGDAYYHFGDYHKAVASFRNY 273 Query: 121 ITQYPESKNVD--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + +N Y++G+SY Q + + + + + A Sbjct: 274 LEK----ENTPRRDALYMLGLSYFQT--------GVFSKAAETLGEVTTE--SDALTQNA 319 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 ++ + LA K R + A + A+ +Y Sbjct: 320 YLHMGLAYLHLAEKNKA-------RMAFEQAA--ASNANLKIKEQAAYNYALCIHETSYS 370 Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLV 270 A E+ V +P +A V + + Sbjct: 371 AFG---ESVTVFEKFLNEFPNSEYAEMVSSYL 399 Score = 35.5 bits (81), Expect = 7.7, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 46/162 (28%), Gaps = 22/162 (13%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + + +Y + + + FSKA E + + + + + + L + Sbjct: 275 EKENTPRRDALYMLGLSYFQTGVFSKAAETLGEVTTE--SDALTQNAYLHMGLAYLHLAE 332 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 +A E+ K + Y + + A + + + + Sbjct: 333 KNKARMAFEQAAASNANLKIKEQAAYNYALCIHETSYS------AFGESVTVFEKFLNEF 386 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 NS Y + Y+ Y+ Y AA+ Sbjct: 387 PNSEYAEMVSSYLVEV--------------YMNTRSYEAALK 414 >gi|325300114|ref|YP_004260031.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides salanitronis DSM 18170] gi|324319667|gb|ADY37558.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides salanitronis DSM 18170] Length = 1003 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 75/214 (35%), Gaps = 45/214 (21%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D +YE+ F++++N + A E + + FP + ++RK+ + Y Sbjct: 611 DYPASPYIDDALYEQGRAFVQQENNAGAIERYTVLLQRFPESPLSRKASNEIGLLYYQED 670 Query: 109 KYQQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPY 150 KY +A + ++ I+ YP S+ DY+ ++ + Sbjct: 671 KYSEAIAAYKKVISDYPGSEEARLAQRDLKSIYIDLNRVDDYLSFVSTLPGGANFDVNER 730 Query: 151 D------------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D + T+ +R ++ + + A +Y+ + +A E Sbjct: 731 DSLTYVAAERVYMRGETEEAKASFTRYLQSFPQGAFSVNASYYLGL----MAYNE----- 781 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 Y A VLA Y D + + EAM Sbjct: 782 -----KNYTEASAYLDKVLA-YPDNKFSGEAMKL 809 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 61/159 (38%), Gaps = 24/159 (15%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 AFV+ Y +T YP S +D Y G ++ Q + ++ Sbjct: 589 AFVKGLQRDYAGKIQTLNRLLTDYPASPYIDDALYEQGRAFVQQENNAG--------AIE 640 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 + +++R+ SP + A EIG Y + +Y AI ++ V+++Y Sbjct: 641 RYTVLLQRFPESPLSRKASN--------------EIGLLYYQEDKYSEAIAAYKKVISDY 686 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLI--QERY 257 +E A A L Y+ L +D+ VS + + Sbjct: 687 PGSEEARLAQRDLKSIYIDLNRVDDYLSFVSTLPGGANF 725 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 79/235 (33%), Gaps = 35/235 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115 ++ +L + F A YF Q R++ + + +Y +Y QAAS Sbjct: 435 LFRIGILAFAQAAFENAIGYFTQSIDL---GRYDRQTKADAYYWRGESKYRLEQYAQAAS 491 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY- 174 Y+ P +Y L + Y V + Q+ + L + +R + Sbjct: 492 DYRLYLEYTPGRTGEEYALALYNLGY------VAFKQKQYEQALTWFTRCSQAQVKDRRI 545 Query: 175 VKGARFYVTVGR---NQLAA-KEVEI---------GRYYLKRGEYVAAIPR--------F 213 V + + A + G Y L + +V + R Sbjct: 546 VADVYNRMGDCHFHARRFAEASALYAQASAADPSLGDYSLFQEAFVKGLQRDYAGKIQTL 605 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 +L +Y + + ++A+ A+V A E +++ +R+P+ +R Sbjct: 606 NRLLTDYPASPYIDDALYEQGRAFVQQENNAGAIERYTVLLQRFPESPLSRKASN 660 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 50/173 (28%), Gaps = 34/173 (19%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + Y S + + Y + + + +SKA + N+ + P + + + L S Sbjct: 271 ETYCGSPEGGKDREAQYALGMSYYQTGVYSKAVDALNKATGR-P-DALTQNAYLHSGLAY 328 Query: 105 YSAGKYQQAASLGEE-----YITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLM 158 +A E+ + +NV + Y + + Sbjct: 329 LQLKDRTRARMAFEQASAMTF------DRNVQEQALYNYALCIHETSYS------PFAES 376 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + R + + NS Y Y+ Y+ Y AA+ Sbjct: 377 VTVFERFLNEFPNSAYAAKVNDYLVEV--------------YMNTRSYQAALN 415 Score = 35.5 bits (81), Expect = 7.7, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 23/150 (15%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + Y A Y+ Q ++ + Y++ + ++ +R + Sbjct: 42 FLRHDYAAAQQTLTHYLQQDTSAEFAEEAAYMLACTSYEL-NKPGRIRR--------LKA 92 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 VE+Y +S YV IG Y Y AI F+ + Sbjct: 93 FVEQYPDSRYVNRVNA--------------LIGSAYFFDKNYPEAIMYFEKCNVRWLADG 138 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +E + RL +Y+ + +A S+++ Sbjct: 139 ERDEVLLRLGTSYLKGGALKDAALWFSILK 168 >gi|170701075|ref|ZP_02892052.1| tol-pal system protein YbgF [Burkholderia ambifaria IOP40-10] gi|170134015|gb|EDT02366.1| tol-pal system protein YbgF [Burkholderia ambifaria IOP40-10] Length = 249 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T + + A + NF A F +P + + QY+ Sbjct: 121 EGTVQPGETDALSAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRD 180 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ + + + +++YP+ +G + Q+A + ++V +Y Sbjct: 181 YRGSTATWQTVVSKYPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFEQVVSQY 232 Query: 170 TNSPYVKGARFYVTVGR 186 S + A+ + + Sbjct: 233 AGSNAAQTAQGKIESIK 249 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 35/109 (32%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y SPY A++++ A + +Y + Sbjct: 142 GNFKAAAASFRSFIAKYPQSPYQPTAQYWLGN-----AQYAL---------RDYRGSTAT 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q V++ Y A +A+ + + A++ + +Y Sbjct: 188 WQTVVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 236 Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 25/66 (37%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + + G + AA F+ +A Y + + A L A AL + + Sbjct: 132 LSAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQTV 191 Query: 254 QERYPQ 259 +YPQ Sbjct: 192 VSKYPQ 197 >gi|167586271|ref|ZP_02378659.1| tol-pal system protein YbgF [Burkholderia ubonensis Bu] Length = 249 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 18/143 (12%), Positives = 49/143 (34%), Gaps = 8/143 (5%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + V T + + + A ++ NF A F +P + + Sbjct: 115 KTVDGVEGTVQPGETDAFNAAQQQFRDGNFKAAAASFRSFITKYPQSPYQPSAQYWLGNA 174 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 QY+ Y+ + + + ++++P+ +G + Q+A + Sbjct: 175 QYALRDYRGSTATWQGIVSKFPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFE 226 Query: 164 RIVERYTNSPYVKGARFYVTVGR 186 ++V +Y + + A+ + + Sbjct: 227 QVVSQYNGTSAAQTAQGKLQTIK 249 Score = 42.8 bits (100), Expect = 0.053, Method: Composition-based stats. Identities = 14/120 (11%), Positives = 37/120 (30%), Gaps = 15/120 (12%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + D K + +Y SPY A++++ A + Sbjct: 132 FNAAQQQFRD-GNFKAAAASFRSFITKYPQSPYQPSAQYWLGN-----AQYAL------- 178 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Y + +Q +++ + A +A+ + + A++ + +Y Sbjct: 179 --RDYRGSTATWQGIVSKFPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYNGTS 236 >gi|239815675|ref|YP_002944585.1| tol-pal system protein YbgF [Variovorax paradoxus S110] gi|239802252|gb|ACS19319.1| tol-pal system protein YbgF [Variovorax paradoxus S110] Length = 249 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 49/137 (35%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T ++ ++ A+ + F++A F + + +P +G +L QY+ Sbjct: 121 EFTADPKEKADFDAALGIFRAGQFAQAQTAFAEFVKRYPQSGYNASALFWLGNAQYATRN 180 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y +A + ++ P+ + ++ + T+ + + + + Y Sbjct: 181 YNEAIANFRSMLSLAPDHAKAPEAVLSIANCQIEL--------KDTRAARRTLEDLTKAY 232 Query: 170 TNSPYVKGARFYVTVGR 186 S + R ++ R Sbjct: 233 PQSEAAQAGRERLSRLR 249 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + V+RY S Y A F++ + Y AI F+ + Sbjct: 146 QAQTAFAEFVKRYPQSGYNASALFWLGNAQ--------------YATRNYNEAIANFRSM 191 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 L+ D A EA+ + + L AR + + + YPQ Sbjct: 192 LSLAPDHAKAPEAVLSIANCQIELKDTRAARRTLEDLTKAYPQSE 236 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 46/142 (32%), Gaps = 22/142 (15%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 K+ +A + AG++ QA + E++ +YP+S + +G + R Sbjct: 128 EKADFDAALGIFRAGQFAQAQTAFAEFVKRYPQSGYNASALFWLGNAQYAT--------R 179 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 + ++ + A + + +L + AA Sbjct: 180 NYNEAIANFRSMLSLAPDHAKAPEAVLSIANCQIEL--------------KDTRAARRTL 225 Query: 214 QLVLANYSDAEHAEEAMARLVE 235 + + Y +E A+ RL Sbjct: 226 EDLTKAYPQSEAAQAGRERLSR 247 >gi|134294842|ref|YP_001118577.1| hypothetical protein Bcep1808_0730 [Burkholderia vietnamiensis G4] gi|134137999|gb|ABO53742.1| conserved hypothetical protein [Burkholderia vietnamiensis G4] Length = 249 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T + + A + NF A F +P + + QY+ Sbjct: 121 EGTVQPGETDALSAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRD 180 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ + + + +++YP+ +G + Q+A + ++V +Y Sbjct: 181 YRGSTATWQAIVSKYPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFEQVVSQY 232 Query: 170 TNSPYVKGARFYVTVGR 186 S + A+ + + Sbjct: 233 AGSNAAQTAQGKIESIK 249 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 35/109 (32%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y SPY A++++ A + +Y + Sbjct: 142 GNFKAAAASFRSFIAKYPQSPYQPTAQYWLGN-----AQYAL---------RDYRGSTAT 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q +++ Y A +A+ + + A++ + +Y Sbjct: 188 WQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 236 Score = 38.9 bits (90), Expect = 0.72, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 25/66 (37%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + + G + AA F+ +A Y + + A L A AL + I Sbjct: 132 LSAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQAI 191 Query: 254 QERYPQ 259 +YPQ Sbjct: 192 VSKYPQ 197 >gi|237709421|ref|ZP_04539902.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229456477|gb|EEO62198.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 967 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 46/222 (20%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D +YE+ F++ ++ + A FN + FP + VAR++ + Y Sbjct: 574 DYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLYYQDD 633 Query: 109 KYQQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPY 150 KY +A ++ I YP S+ +Y + + Sbjct: 634 KYPEAIQAYKQVIASYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTIPGGANFDVNER 693 Query: 151 D------------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D + +R ++ + + A +Y+ + Sbjct: 694 DSLTYVAAERVYMRGEVTEARNSFTRYLQTFPEGAFSLNANYYIGLID------------ 741 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVA 239 + Y +A VL Y + +++E+AM E AY A Sbjct: 742 --YNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTA 780 Score = 62.4 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 74/214 (34%), Gaps = 26/214 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117 +Y + K++N+ A +F + A ++ + +++QA Sbjct: 474 LYNLGYTYFKQKNYGNAGTWFTRFVDRGSANERAMQADAYNRIGDCNFYDRRFEQARQDY 533 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P DY Y +R + D +Q ++R++ Y S Y+ Sbjct: 534 ARAVEIDPS--LGDYSLYQEA-----FVRGLQRD---YNGKVQTLNRLISDYPESQYMDD 583 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A E GR +++ + AI RF +++ + ++ A A + Y Sbjct: 584 AL--------------YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLY 629 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 EA + + YP AR + +K Sbjct: 630 YQDDKYPEAIQAYKQVIASYPGSEEARLAQRDLK 663 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 75/248 (30%), Gaps = 52/248 (20%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + L + + C L G +Q + R RE K + E Sbjct: 1 MKRKTLLMAALMGGCSLQGMAQQITPKDVAGDKEYNRVCREYELKGGDSM---------E 51 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +P + + L + A + GKY++A +L Sbjct: 52 LLQAYLDKYPDSRHKNRVLSLIASAYFMEGKYKEAIALFRS------------------- 92 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL------AAK 192 + + D D A +L Y+ ++ A + T+ + A Sbjct: 93 -CDLEALPDKERDDCAMRLATSYLKE--------DNLREAAVWFTLLKEVSPLYQDDAVY 143 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM--ARLVEAYVALALMDEAREVV 250 + Y KR Y A+ FQ + + A+ + E Y+ +AR V Sbjct: 144 NLAYIDYVEKR--YDKALKSFQSLQND-----AVYAALVPYYIGEIYLVKGNYQQARTVA 196 Query: 251 SLIQERYP 258 E+YP Sbjct: 197 KAYLEQYP 204 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y ++ ++ + A + ++ +P + ++LM A + Y+A Y++A + ++ Sbjct: 735 YYIGLIDYNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQ 792 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 76/233 (32%), Gaps = 31/233 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A ++A F + + FP + + + Y+ Y+ AA ++ Sbjct: 698 YVAAERVYMRGEVTEARNSFTRYLQTFPEGAFSLNANYYIGLIDYNQKAYESAARHLDKV 757 Query: 121 ITQYPESKNVDYVY------------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + YP +K + Y + + ++D +L M R Sbjct: 758 LE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQLKDKAASMERRQLAKTGMLRSAHM 816 Query: 169 YTNSPYVKGARFYVTVGRNQLAAK----EVEIGRYYLKRGEYVAAIPRFQLVLANY---- 220 N + + + LA E+ +Y + Y+ A + + Sbjct: 817 LGNEEEI------IFTATDLLADTKLAPELSNEAHYYRAKAYLDAGK-TDGAMEDLKILA 869 Query: 221 SDAEHAE--EAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270 D + EA ++ + Y D+A +EV++ I+ P YW L+ Sbjct: 870 KDTRNVYGAEAKYKVAQIYFDGGQTDKAEQEVLNYIEVSTPHTYWLARSFVLL 922 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 24/153 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +YE + + +SKA + + +++ + L + + +A E+ Sbjct: 248 LYELGMSYYYTGVYSKAAATLGEMASVH--DALSQNAYLHMGLAYLNLKERNRARMAFEQ 305 Query: 120 YITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + V + Y + + + R + + NSPY + Sbjct: 306 -AANFSFDPKVKEQALYNYALCIHETSYS------PFAESVTVFERFLNEFPNSPYTERV 358 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Y+ Y+ Y AA+ Sbjct: 359 NDYLIEV--------------YMNTRSYEAALK 377 >gi|237724975|ref|ZP_04555456.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229436713|gb|EEO46790.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 967 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 46/222 (20%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D +YE+ F++ ++ + A FN + FP + VAR++ + Y Sbjct: 574 DYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLYYQDD 633 Query: 109 KYQQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPY 150 KY +A ++ I YP S+ +Y + + Sbjct: 634 KYPEAIQAYKQVIASYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTIPGGANFDVNER 693 Query: 151 D------------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D + +R ++ + + A +Y+ + Sbjct: 694 DSLTYVAAERVYMRGEVTEARNSFTRYLQTFPEGAFSLNANYYIGLID------------ 741 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVA 239 + Y +A VL Y + +++E+AM E AY A Sbjct: 742 --YNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTA 780 Score = 62.4 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 74/214 (34%), Gaps = 26/214 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117 +Y + K++N+ A +F + A ++ + +++QA Sbjct: 474 LYNLGYTYFKQKNYGNAGTWFTRFVDRGSANERAMQADAYNRIGDCNFYDRRFEQARQDY 533 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P DY Y +R + D +Q ++R++ Y S Y+ Sbjct: 534 ARAVEIDPS--LGDYSLYQEA-----FVRGLQRD---YNGKVQTLNRLISDYPESQYMDD 583 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A E GR +++ + AI RF +++ + ++ A A + Y Sbjct: 584 AL--------------YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLY 629 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 EA + + YP AR + +K Sbjct: 630 YQDDKYPEAIQAYKQVIASYPGSEEARLAQRDLK 663 Score = 40.1 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 75/248 (30%), Gaps = 52/248 (20%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + L + + C L G +Q + R RE K + E Sbjct: 1 MKRKTLLMAALMGGCSLQGMAQQITPKDVAGDKEYNRVCREYELKGGDSM---------E 51 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +P + + L + A + GKY++A +L Sbjct: 52 LLQAYLDKYPDSRHKNRVLSLIASAYFMEGKYKEAIALFRS------------------- 92 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL------AAK 192 + + D D A +L Y+ ++ A + T+ + A Sbjct: 93 -CDLEALPDKERDDCAMRLATSYLKE--------DNLREAAVWFTLLKEVSPLYQDDAVY 143 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM--ARLVEAYVALALMDEAREVV 250 + Y KR Y A+ FQ + + A+ + E Y+ +AR V Sbjct: 144 NLAYIDYVEKR--YDKALKSFQSLQND-----AVYAALVPYYIGEIYLVKGNYQQARTVA 196 Query: 251 SLIQERYP 258 E+YP Sbjct: 197 KAYLEQYP 204 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y ++ ++ + A + ++ +P + ++LM A + Y+A Y++A + ++ Sbjct: 735 YYIGLIDYNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQ 792 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 76/233 (32%), Gaps = 31/233 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A ++A F + + FP + + + Y+ Y+ AA ++ Sbjct: 698 YVAAERVYMRGEVTEARNSFTRYLQTFPEGAFSLNANYYIGLIDYNQKAYESAARHLDKV 757 Query: 121 ITQYPESKNVDYVY------------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + YP +K + Y + + ++D +L M R Sbjct: 758 LE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQLKDKAASMERRQLAKTGMLRSAHM 816 Query: 169 YTNSPYVKGARFYVTVGRNQLAAK----EVEIGRYYLKRGEYVAAIPRFQLVLANY---- 220 N + + + LA E+ +Y + Y+ A + + Sbjct: 817 LGNEEEI------IFTATDLLADTKLAPELSNEAHYYRAKAYLDAGK-TDGAMEDLKILA 869 Query: 221 SDAEHAE--EAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270 D + EA ++ + Y D+A +EV++ I+ P YW L+ Sbjct: 870 KDTRNVYGAEAKYKVAQIYFDGGQTDKAEQEVLNYIEVSTPHTYWLARSFVLL 922 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 24/153 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +YE + + +SKA + + +++ + L + + +A E+ Sbjct: 248 LYELGMSYYYTGVYSKAAATLGEMASVH--DALSQNAYLHMGLAYLNLKERNRARMAFEQ 305 Query: 120 YITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + V + Y + + + R + + NSPY + Sbjct: 306 -AANFSFDPKVKEQALYNYALCIHETSYS------PFAESVTVFERFLNEFPNSPYTERV 358 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Y+ Y+ Y AA+ Sbjct: 359 NDYLIEV--------------YMNTRSYEAALK 377 >gi|161525758|ref|YP_001580770.1| tol-pal system protein YbgF [Burkholderia multivorans ATCC 17616] gi|189349520|ref|YP_001945148.1| hypothetical protein BMULJ_00649 [Burkholderia multivorans ATCC 17616] gi|221201004|ref|ZP_03574044.1| tol-pal system protein YbgF [Burkholderia multivorans CGD2M] gi|221206544|ref|ZP_03579557.1| tol-pal system protein YbgF [Burkholderia multivorans CGD2] gi|221214398|ref|ZP_03587369.1| tol-pal system protein YbgF [Burkholderia multivorans CGD1] gi|160343187|gb|ABX16273.1| tol-pal system protein YbgF [Burkholderia multivorans ATCC 17616] gi|189333542|dbj|BAG42612.1| conserved hypothetical protein [Burkholderia multivorans ATCC 17616] gi|221165655|gb|EED98130.1| tol-pal system protein YbgF [Burkholderia multivorans CGD1] gi|221173853|gb|EEE06287.1| tol-pal system protein YbgF [Burkholderia multivorans CGD2] gi|221178854|gb|EEE11261.1| tol-pal system protein YbgF [Burkholderia multivorans CGD2M] Length = 249 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 47/143 (32%), Gaps = 8/143 (5%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + + T + + A + NF A F +P + + Sbjct: 115 KTIDGVEGTVQPGETDALNAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNA 174 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 QY+ Y+ + + + +++YP+ +G + Q+A + Sbjct: 175 QYALRDYRGSTATWQAIVSKYPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFE 226 Query: 164 RIVERYTNSPYVKGARFYVTVGR 186 ++V +Y S + A+ + + Sbjct: 227 QVVSQYAGSNAAQTAQGKLESIK 249 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 35/109 (32%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y SPY A++++ + L +Y + Sbjct: 142 GNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYAL--------------RDYRGSTAT 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q +++ Y A +A+ + + A++ + +Y Sbjct: 188 WQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 236 Score = 38.9 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 25/66 (37%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + + G + AA F+ +A Y + + A L A AL + I Sbjct: 132 LNAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQAI 191 Query: 254 QERYPQ 259 +YPQ Sbjct: 192 VSKYPQ 197 >gi|60683635|ref|YP_213779.1| TPR repeat-containing protein [Bacteroides fragilis NCTC 9343] gi|253566489|ref|ZP_04843942.1| TPR repeat-containing protein [Bacteroides sp. 3_2_5] gi|265767358|ref|ZP_06095024.1| TPR repeat-containing protein [Bacteroides sp. 2_1_16] gi|60495069|emb|CAH09888.1| putative TPR-repeat protein [Bacteroides fragilis NCTC 9343] gi|251944661|gb|EES85136.1| TPR repeat-containing protein [Bacteroides sp. 3_2_5] gi|263252663|gb|EEZ24175.1| TPR repeat-containing protein [Bacteroides sp. 2_1_16] gi|301165147|emb|CBW24717.1| putative TPR-repeat protein [Bacteroides fragilis 638R] Length = 1002 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 75/206 (36%), Gaps = 31/206 (15%) Query: 44 RDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSR-DFPFAGVA--RKSLLM 99 + + L+ + + Y + +L +NF +A Y++Q + P + + +L+ Sbjct: 533 KYISLEKGENKTALADAYNRIGDCYLDVRNFDEAKHYYSQAEAMNTPSGDYSFYQLALVS 592 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y +L +YP S Y G SY M + + + Sbjct: 593 G-----LQKDYSGKITLLNRLAGKYPASPYAISALYEKGRSYVLMDNN--------QQAI 639 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 ++ +Y SP + A EIG Y + +Y AI ++ V+ Sbjct: 640 ASFKELLAKYPESPVSRKAAA--------------EIGLLYYQNEDYDQAINAYKQVVQK 685 Query: 220 YSDAEHAEEAMARLVEAYVALALMDE 245 Y ++ A AM L YV + +DE Sbjct: 686 YPGSDEARLAMRDLKSIYVDMNRIDE 711 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 39/277 (14%), Positives = 78/277 (28%), Gaps = 60/277 (21%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K + ++A C V + Q+S + +Y++ ++N++ A Sbjct: 1 MKKKISRLICAVACCVPVALQAQTSEKI--------TSPVNLYKEGKELFLQKNYAAAMP 52 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 R + ++ M Y + A + Y+ YP++ + + +Y L+ Sbjct: 53 PLRTFVRQKADVNLKEEAEYMLVCSAYELKD-RNAIAQLRNYLDTYPDTPHANRIYALIA 111 Query: 139 MSYAQM-----------------IRDVPYDQ------------RATKLMLQYMSRIVERY 169 +Y + + D K + + Sbjct: 112 SAYFYQGNYDEALALFNSSRLDLLGNEERDDMTYQLATCYLKVGNVKEAAIWFETLKASS 171 Query: 170 TNSPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKRGEYVAA 209 Y +Y++ R + I Y + Y A Sbjct: 172 P--KYANDCSYYISYIRYTQKRYDEALKGFLPLQDDAKYKALVPYYIAEIYAVKKNYDKA 229 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 Q L+ Y EHA E L +AY +A Sbjct: 230 QIVAQNYLSAYPQNEHAAEMYRILGDAYYHFGDYHKA 266 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 72/214 (33%), Gaps = 28/214 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y + ++++++A +F + + +A + + +A Sbjct: 512 YNLGYIAFHQKDYTQAQNWFRKYISLEKGENKTALA-DAYNRIGDCYLDVRNFDEAKHYY 570 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + + + DY +Y + + + ++R+ +Y SPY Sbjct: 571 SQAEAMN--TPSGDYSFYQLALVSGLQKDYSGK--------ITLLNRLAGKYPASPYAIS 620 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A E GR Y+ AI F+ +LA Y ++ + +A A + Y Sbjct: 621 AL--------------YEKGRSYVLMDNNQQAIASFKELLAKYPESPVSRKAAAEIGLLY 666 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 D+A + ++YP AR +K Sbjct: 667 YQNEDYDQAINAYKQVVQKYPGSDEARLAMRDLK 700 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 29/234 (12%), Positives = 73/234 (31%), Gaps = 36/234 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115 +++ F +A YF++ R++ + + Y + ++A Sbjct: 434 LFQLGTQAFANTQFEQAIGYFDRSLGL---GQYNRQTKADALYWRGEAYYRLNRMEEAKR 490 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV--ERYTNSP 173 +Y+ ++ N Y +++ + + + Q+ + + + E+ N Sbjct: 491 NFTDYLQLTQQTHNEMYA-----LAHYNL-GYIAFHQKDYTQAQNWFRKYISLEKGENKT 544 Query: 174 YVKGARFYVTVG----RNQ-LAAKEVEIGR----------YYL------KRGEYVAAIPR 212 + A + RN A +Y + +Y I Sbjct: 545 ALADAYNRIGDCYLDVRNFDEAKHYYSQAEAMNTPSGDYSFYQLALVSGLQKDYSGKITL 604 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 + Y + +A A+ +YV + +A + +YP+ +R Sbjct: 605 LNRLAGKYPASPYAISALYEKGRSYVLMDNNQQAIASFKELLAKYPESPVSRKA 658 Score = 40.9 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 65/212 (30%), Gaps = 28/212 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A ++ ++N+ KA +P A + + Y G Y +A + Y Sbjct: 214 YYIAEIYAVKKNYDKAQIVAQNYLSAYPQNEHAAEMYRILGDAYYHFGDYHKAVASFRNY 273 Query: 121 ITQYPESKNVD--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + +N Y++G+SY Q + + + + + A Sbjct: 274 LEK----ENTPRRDALYMLGLSYFQT--------GVFSKAAETLGEVTTE--SDALTQNA 319 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 ++ + LA K R + A + A+ +Y Sbjct: 320 YLHMGLAYLHLAEKNKA-------RMAFEQAA--ASNANLKIKEQAAYNYALCIHETSYS 370 Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLV 270 A E+ V +P +A V + + Sbjct: 371 AFG---ESVTVFEKFLNEFPNSEYAEMVSSYL 399 Score = 35.5 bits (81), Expect = 7.7, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 46/162 (28%), Gaps = 22/162 (13%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + + +Y + + + FSKA E + + + + + + L + Sbjct: 275 EKENTPRRDALYMLGLSYFQTGVFSKAAETLGEVTTE--SDALTQNAYLHMGLAYLHLAE 332 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 +A E+ K + Y + + A + + + + Sbjct: 333 KNKARMAFEQAAASNANLKIKEQAAYNYALCIHETSYS------AFGESVTVFEKFLNEF 386 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 NS Y + Y+ Y+ Y AA+ Sbjct: 387 PNSEYAEMVSSYLVEV--------------YMNTRSYEAALK 414 >gi|224417743|ref|ZP_03655749.1| TPR repeat-containing protein [Helicobacter canadensis MIT 98-5491] Length = 171 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 4/151 (2%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + KA YF + + + +++L+ +Y A +EY ++ + +N+ Sbjct: 1 GDLEKADSYFTSLQSEHLHSPLLSEAMLILGRAHMQEEEYLLAIFYFDEYTKRFGDGQNI 60 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 D++ +L + DQ+ + ++ ++Y S Y + +LA Sbjct: 61 DFINFLKLQANYFAFAKQFRDQQLLEKSIKDAQDFGQKYPYSRYRPIVDTMLLKL--ELA 118 Query: 191 AKEV--EIGRYYLKRGEYVAAIPRFQLVLAN 219 + EI + Y K+ + AA Q + N Sbjct: 119 NLSLNKEIIKLYDKKDKPQAAEYYQQKINEN 149 >gi|307721713|ref|YP_003892853.1| DNA uptake lipoprotein [Sulfurimonas autotrophica DSM 16294] gi|306979806|gb|ADN09841.1| DNA uptake lipoprotein [Sulfurimonas autotrophica DSM 16294] Length = 246 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 66/192 (34%), Gaps = 7/192 (3%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K + ++ L + + +V Y K V + + KA + Sbjct: 1 MKKQIYILLMALTFSLLFSACTKEVDEYNKPAVYW-------YGKIVESISAGSIDKADD 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 Y++ + + + ++ ++ A +Y EY+ +Y + ++ +L Sbjct: 54 YYSSLQGEHIGSPLLPEATMILAIAHMHNEEYLLTEHFLNEYVRRYANANEREFAEFLKI 113 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 + + + + DQ + ++ + Y +S Y +T A+ I Sbjct: 114 KAKYKALPNPRRDQVLIQEAIKDAKTFKQNYPHSMYYSLVDTMLTNLYLADASLNEAIAD 173 Query: 199 YYLKRGEYVAAI 210 Y++ + AA Sbjct: 174 LYVRLDKPKAAA 185 >gi|94987535|ref|YP_595468.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Lawsonia intracellularis PHE/MN1-00] gi|94731784|emb|CAJ55147.1| Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Lawsonia intracellularis PHE/MN1-00] Length = 1076 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 81/233 (34%), Gaps = 35/233 (15%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 S+ ++ R + ++ L+ N +A YF R FP + ++ L Sbjct: 487 TSTNKAMNFNLRSPRVAEALMRLGMVNLRIGNQDEAAGYFGALRRKFPQSEFIPEAYLAL 546 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 Q+S G+Y A + + YPESK V ++ + + + Q L Sbjct: 547 GKDQFSKGEYADAVKTFQLILDNYPESKAVQDA--------SRFMAEALFKQGHYSRALI 598 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 + + R+ Y++ + +G Y + R L Y Sbjct: 599 LVDFVDRRWPR-LYLEDPN----YLK--------MVGDLYSRE-------NRLDDALKAY 638 Query: 221 -------SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 +A+ + + + ++ +Y LM ++V + +++P+ A Sbjct: 639 WTYYNLVPEAKDSHDTLFKIGTSYFKKGLMQGGKDVFEELLKKFPKSDSAPKA 691 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 73/234 (31%), Gaps = 49/234 (20%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC-----------SRDFPFAGVA 93 D + V + E+A ++ KA + + F+ + Sbjct: 411 DEKGNPVGKPPDTTAIIEEAKKNMRAGQVQKAKDLLATLKGHALVQEQHEEVLYLFSELN 470 Query: 94 RKSLLMSAFVQYSA---GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 K Y Y+ + + + S V +GM ++ Sbjct: 471 EKI--------YKDRWIEGYEPIITSTNKAMNFNLRSPRVAEALMRLGMVNLRI------ 516 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 Y + ++ S ++ A Y+ +G++Q +GEY A+ Sbjct: 517 --GNQDEAAGYFGALRRKFPQSEFIPEA--YLALGKDQ------------FSKGEYADAV 560 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 FQL+L NY +++ ++A + EA A LI + W R Sbjct: 561 KTFQLILDNYPESKAVQDASRFMAEALFKQGHYSRA-----LILVDFVDRRWPR 609 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 51/131 (38%), Gaps = 24/131 (18%) Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSA--GKYQQAASLGEEYITQYPESKNVDYVYYL 136 Y+ + ++P + A+++ + + A ++ ++++ +YPES + Sbjct: 725 YYKKILDEYPNSPEAQQAAIRL--AAWKLWHRDIPTAMTMAQQFLDKYPESPYAPRAEEI 782 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQY--MSRIVERYTNSPYVKGARFYV-TVGRNQLAAKE 193 + +DQ L LQ RI+ + PY++ A + R LA Sbjct: 783 IA---------RGFDQSFA-LALQEENYERILSLWEKYPYLQIAYKDMTDELRVALA--- 829 Query: 194 VEIGRYYLKRG 204 R YL RG Sbjct: 830 ----RAYLNRG 836 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 78/236 (33%), Gaps = 34/236 (14%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ------ 104 +++ + K+ + F + + FP + A K+LL Q Sbjct: 646 PEAKDSHDTLFKIGTSYFKKGLMQGGKDVFEELLKKFPKSDSAPKALLALGEEQVIKENP 705 Query: 105 --------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + ++ + +YP S + ++ RD+P Sbjct: 706 TIQELVTIFENPSSTIPEIYYKKILDEYPNSPEAQQAA-IRLAAWKLWHRDIPT------ 758 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ---LAAKEVEIGRYYLKRGEYVAAIPRF 213 + + +++Y SPY A + G +Q LA +E Y + ++ ++ Sbjct: 759 -AMTMAQQFLDKYPESPYAPRAEEIIARGFDQSFALALQE----ENYERI---LSLWEKY 810 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 + Y D +E L AY+ ++ ++++ E + YV L Sbjct: 811 PYLQIAYKD--MTDELRVALARAYLNRGDEEKGMDLLNQFLESPQDPNYGDYVYNL 864 Score = 35.9 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 31/83 (37%) Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 ++A + +G L+ G A F + + +E EA L + + +A Sbjct: 501 RVAEALMRLGMVNLRIGNQDEAAGYFGALRRKFPQSEFIPEAYLALGKDQFSKGEYADAV 560 Query: 248 EVVSLIQERYPQGYWARYVETLV 270 + LI + YP+ + + Sbjct: 561 KTFQLILDNYPESKAVQDASRFM 583 >gi|256819391|ref|YP_003140670.1| hypothetical protein Coch_0551 [Capnocytophaga ochracea DSM 7271] gi|256580974|gb|ACU92109.1| Tetratricopeptide TPR_2 repeat protein [Capnocytophaga ochracea DSM 7271] Length = 1001 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 71/213 (33%), Gaps = 25/213 (11%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAG 108 + Y + Y A ++N++ A F + + P + ++L A + G Sbjct: 492 APKTEEYAKGFYGLAYANFNQKNYAGAIANFEKYLKQNPKNSSWKHDAILRLADSYFVTG 551 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 KY A + I +S + DY Y +SY + R ++ + R V+ Sbjct: 552 KYWPAMEGYNKLIEA--KSSDQDYAAYQKAISYGFVDRLNSK--------IEDLERFVKN 601 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y +S A E+G Y+ +G + +Q + Y Sbjct: 602 YKSSNLRPNAL--------------FELGNAYVTKGNTQKGLQYYQQLAKEYKGNVLVPR 647 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 AM R Y +A + I + YP Sbjct: 648 AMLREGLVYYNRNENQKALTLFQTIAKDYPNTN 680 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 35/247 (14%), Positives = 78/247 (31%), Gaps = 48/247 (19%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + D Y++ + + + E +++A +Y + + +A ++ + Sbjct: 413 EKSNDPKDKETYKKVAFYRGLELFNELQYNEALKYLQKAIGGN--SALAARATYWAGETA 470 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y Y+ A S +++ K +Y +Y G++YA ++Q+ + Sbjct: 471 YQLKDYKGAESYFTQFLHNSSAPKTEEYAKGFY--GLAYAN------FNQKNYAGAIANF 522 Query: 163 SRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG----------------E 205 + +++ NS + A LA G+Y+ Sbjct: 523 EKYLKQNPKNSSWKHDAILR-------LADSYFVTGKYWPAMEGYNKLIEAKSSDQDYAA 575 Query: 206 YVAAIPR------------FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 Y AI + + NY + A+ L AYV + + + Sbjct: 576 YQKAISYGFVDRLNSKIEDLERFVKNYKSSNLRPNALFELGNAYVTKGNTQKGLQYYQQL 635 Query: 254 QERYPQG 260 + Y Sbjct: 636 AKEYKGN 642 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 32/228 (14%), Positives = 84/228 (36%), Gaps = 44/228 (19%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++E ++ + N K +Y+ Q ++++ + +++L V Y+ + Q+A +L Sbjct: 609 PNALFELGNAYVTKGNTQKGLQYYQQLAKEYKGNVLVPRAMLREGLVYYNRNENQKALTL 668 Query: 117 GEEYITQYPESKNV------------------DYVYYLVGMSYAQMIR-----------D 147 + YP + +Y + G+ Y ++ + Sbjct: 669 FQTIAKDYPNTNEASQAVASAKLIYVDMGNVNEYASWAKGLGYVEVTDLELEGATYEAAE 728 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 Y Q TK + + ++ + N A E + + Y G+ Sbjct: 729 RQYMQNNTKEAISGFEKYLKEFPNGMRRTNA--------------EFFLAQMYFNSGQKA 774 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 A+ ++ V + S+ E+ E+++ R+ + + +A+ + ++ Sbjct: 775 KALTHYENVTKSGSN-EYGEQSLTRVCQILLEAGSYLKAKPYLEDLER 821 >gi|170691333|ref|ZP_02882498.1| tol-pal system protein YbgF [Burkholderia graminis C4D1M] gi|170143538|gb|EDT11701.1| tol-pal system protein YbgF [Burkholderia graminis C4D1M] Length = 252 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 48/132 (36%), Gaps = 8/132 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + + A + +F A F FP + + Y+ Y+ + Sbjct: 129 PGETDAFNAASQQFRNGDFKNAAASFRSFIAKFPSSPYQPTAQYWLGNALYALRDYKGST 188 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + + + YP+ L+ ++ Q+ + Q+A + + +IV +Y S Sbjct: 189 ATWQGVVKNYPQHPRAPEA--LLAIANNQLEQG----QKAA--AKKTLEQIVAQYGGSDV 240 Query: 175 VKGARFYVTVGR 186 + A+ ++ + Sbjct: 241 AQSAQSKLSQIK 252 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 37/109 (33%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + ++ +SPY A++++ + R +Y + Sbjct: 145 GDFKNAAASFRSFIAKFPSSPYQPTAQYWL--------GNALYALR------DYKGSTAT 190 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q V+ NY A EA+ + + A++ + I +Y Sbjct: 191 WQGVVKNYPQHPRAPEALLAIANNQLEQGQKAAAKKTLEQIVAQYGGSD 239 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 50/132 (37%), Gaps = 22/132 (16%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Q+ G ++ AA+ +I ++P S Y +G + + R K Sbjct: 141 QFRNGDFKNAAASFRSFIAKFPSSPYQPTAQYWLGNALYAL--------RDYKGSTATWQ 192 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 +V+ Y P A + I L++G+ AA + ++A Y + Sbjct: 193 GVVKNYPQHPRAPEAL--------------LAIANNQLEQGQKAAAKKTLEQIVAQYGGS 238 Query: 224 EHAEEAMARLVE 235 + A+ A ++L + Sbjct: 239 DVAQSAQSKLSQ 250 >gi|315224829|ref|ZP_07866650.1| TPR-domain containing protein [Capnocytophaga ochracea F0287] gi|314945232|gb|EFS97260.1| TPR-domain containing protein [Capnocytophaga ochracea F0287] Length = 1001 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 71/213 (33%), Gaps = 25/213 (11%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAG 108 + Y + Y A ++N++ A F + + P + ++L A + G Sbjct: 492 APKTEEYAKGFYGLAYANFNQKNYAGAIANFEKYLKQNPKNSSWKHDAILRLADSYFVTG 551 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 KY A + I +S + DY Y +SY + R ++ + R V+ Sbjct: 552 KYWPAMEGYNKLIEA--KSSDQDYAAYQKAISYGFVDRLNSK--------IEDLERFVKN 601 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y +S A E+G Y+ +G + +Q + Y Sbjct: 602 YKSSNLRPNAL--------------FELGNAYVTKGNTQKGLQYYQQLAKEYKGNVLVPR 647 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 AM R Y +A + I + YP Sbjct: 648 AMLREGLVYYNRNENQKALTLFQTIAKDYPNTN 680 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 35/247 (14%), Positives = 78/247 (31%), Gaps = 48/247 (19%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + D Y++ + + + E +++A +Y + + +A ++ + Sbjct: 413 EKSNDPKDKETYKKVAFYRGLELFNELQYNEALKYLQKAIGGN--SALAARATYWAGETA 470 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y Y+ A S +++ K +Y +Y G++YA ++Q+ + Sbjct: 471 YQLKDYKGAESYFTQFLHNSSAPKTEEYAKGFY--GLAYAN------FNQKNYAGAIANF 522 Query: 163 SRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG----------------E 205 + +++ NS + A LA G+Y+ Sbjct: 523 EKYLKQNPKNSSWKHDAILR-------LADSYFVTGKYWPAMEGYNKLIEAKSSDQDYAA 575 Query: 206 YVAAIPR------------FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 Y AI + + NY + A+ L AYV + + + Sbjct: 576 YQKAISYGFVDRLNSKIEDLERFVKNYKSSNLRPNALFELGNAYVTKGNTQKGLQYYQQL 635 Query: 254 QERYPQG 260 + Y Sbjct: 636 AKEYKGN 642 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 85/228 (37%), Gaps = 44/228 (19%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++E ++ + N K +Y+ Q ++++ + +++L V Y+ + Q+A +L Sbjct: 609 PNALFELGNAYVTKGNTQKGLQYYQQLAKEYKGNVLVPRAMLREGLVYYNRNENQKALTL 668 Query: 117 GEEYITQYPESKNV------------------DYVYYLVGMSYAQMIR-----------D 147 + YP + +Y + G+ Y ++ + Sbjct: 669 FQTIAKDYPNTNEASQAVASAKLIYVDMGNVNEYASWAKGLGYVEVTDLELEGATYEAAE 728 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 Y Q TK + + ++ + N A E +G+ Y G+ Sbjct: 729 RQYMQNNTKEAISGFEKYLKEFPNGMRRTNA--------------EFYLGQMYFNSGQKS 774 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 A+ ++ V + S+ E+ E+++ R+ + + +A+ + ++ Sbjct: 775 KALTHYENVTKSGSN-EYGEQSLTRVCQILLEAGSYLKAKPYLEDLER 821 >gi|83943920|ref|ZP_00956377.1| hypothetical protein EE36_09755 [Sulfitobacter sp. EE-36] gi|83954493|ref|ZP_00963204.1| hypothetical protein NAS141_14768 [Sulfitobacter sp. NAS-14.1] gi|83840777|gb|EAP79948.1| hypothetical protein NAS141_14768 [Sulfitobacter sp. NAS-14.1] gi|83845167|gb|EAP83047.1| hypothetical protein EE36_09755 [Sulfitobacter sp. EE-36] Length = 283 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 42/120 (35%), Gaps = 10/120 (8%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-QQAASLGEE 119 +E+A L + +F A + F ++ +P + ++ L G + A + Sbjct: 164 FERAKAALADGDFRSAADQFATFNQTYPGGPLGPEADLRRGDALDGLGDTREAARAYLAS 223 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P Y +G S + T+ + + R+ SP+V A+ Sbjct: 224 FSAD-PAGPVAAEALYQLGSSLGAL--------GQTQEACVTLGEVASRFPTSPFVAQAQ 274 Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 33/111 (29%), Gaps = 16/111 (14%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA-KEVEIGRYYLKRGEYVAAIP 211 + + + Y P A + L +E R Y+A+ Sbjct: 174 GDFRSAADQFATFNQTYPGGPLGPEADLRRGDALDGLGDTRE--AAR------AYLAS-- 223 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + A EA+ +L + AL EA + + R+P + Sbjct: 224 -----FSADPAGPVAAEALYQLGSSLGALGQTQEACVTLGEVASRFPTSPF 269 >gi|320107210|ref|YP_004182800.1| transporter auxiliary protein [Terriglobus saanensis SP1PR4] gi|319925731|gb|ADV82806.1| transporter auxiliary protein, TonB-ExbB-ExbD/TolA-TolQ-TolR (TonB) family [Terriglobus saanensis SP1PR4] Length = 314 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 52/125 (41%), Gaps = 8/125 (6%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 R++Y+ A ++ A F + +P +A + + Y AGK+ AA Sbjct: 187 RDLYQTAYGDFVGAKYTLASAEFGDVVKFYPDDPLAGNAYFYLGEIDYKAGKFNSAAKNY 246 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + + QYP + + + G S + ++ + ++ + +++R+ NSP Sbjct: 247 DHVLEQYPGNAKIPVSHLRKGQSLIALKQN--------EAGIRELRSLIQRFPNSPEATQ 298 Query: 178 ARFYV 182 AR + Sbjct: 299 ARSKL 303 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 35/105 (33%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L +V+ Y + P A FY+ K G++ +A + V Sbjct: 204 LASAEFGDVVKFYPDDPLAGNAYFYLGEID--------------YKAGKFNSAAKNYDHV 249 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 L Y + R ++ +AL + + + +R+P Sbjct: 250 LEQYPGNAKIPVSHLRKGQSLIALKQNEAGIRELRSLIQRFPNSP 294 >gi|212692725|ref|ZP_03300853.1| hypothetical protein BACDOR_02223 [Bacteroides dorei DSM 17855] gi|212664661|gb|EEB25233.1| hypothetical protein BACDOR_02223 [Bacteroides dorei DSM 17855] Length = 967 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 46/222 (20%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D +YE+ F++ ++ + A FN + FP + VAR++ + Y Sbjct: 574 DYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLYYQDD 633 Query: 109 KYQQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPY 150 KY +A ++ I YP S+ +Y + + Sbjct: 634 KYPEAIQAYKQVIASYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTIPGGANFDVNER 693 Query: 151 D------------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D + +R ++ + + A +Y+ + Sbjct: 694 DSLTYVAAERVYMRGEVTEARNSFTRYLQTFPEGAFSLNANYYIGLID------------ 741 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVA 239 + Y +A VL Y + +++E+AM E AY A Sbjct: 742 --YNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTA 780 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 74/214 (34%), Gaps = 26/214 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117 +Y + K++N+ A +F + A ++ + +++QA Sbjct: 474 LYNLGYTYFKQKNYGNAGTWFTRFVDRGSANERAMQADAYNRIGDCNFYDRRFEQARQDY 533 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P DY Y +R + D +Q ++R++ Y S Y+ Sbjct: 534 ARAVEIDPS--LGDYSLYQEA-----FVRGLQRD---YNGKVQTLNRLISDYPESQYMDD 583 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A E GR +++ + AI RF +++ + ++ A A + Y Sbjct: 584 AL--------------YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLY 629 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 EA + + YP AR + +K Sbjct: 630 YQDDKYPEAIQAYKQVIASYPGSEEARLAQRDLK 663 Score = 40.1 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 75/248 (30%), Gaps = 52/248 (20%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + L + + C L G +Q + R RE K + E Sbjct: 1 MKRKTLLMAALMGGCSLQGMAQQITPKDVAGDKEYNRVCREYELKGGDSM---------E 51 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +P + + L + A + GKY++A +L Sbjct: 52 LLQAYLDKYPDSRHKNRVLSLIASAYFMEGKYKEAIALFRS------------------- 92 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL------AAK 192 + + D D A +L Y+ ++ A + T+ + A Sbjct: 93 -CDLEALPDKERDDCAMRLATSYLKE--------DNLREAAVWFTLLKEVSPLYQDDAVY 143 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM--ARLVEAYVALALMDEAREVV 250 + Y KR Y A+ FQ + + A+ + E Y+ +AR V Sbjct: 144 NLAYIDYVEKR--YDKALKSFQSLQND-----AVYAALVPYYIGEIYLVKGNYQQARTVA 196 Query: 251 SLIQERYP 258 E+YP Sbjct: 197 KAYLEQYP 204 Score = 37.8 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y ++ ++ + A + ++ +P + ++LM A + Y+A Y++A + ++ Sbjct: 735 YYIGLIDYNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQ 792 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 76/232 (32%), Gaps = 29/232 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A ++A F + + FP + + + Y+ Y+ AA ++ Sbjct: 698 YVAAERVYMRGEVTEARNSFTRYLQTFPEGAFSLNANYYIGLIDYNQKAYESAARHLDKV 757 Query: 121 ITQYPESKNVDYVY------------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + YP +K + Y + + ++D +L M R Sbjct: 758 LE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQLKDKAASMERRQLAKTGMLRSAHM 816 Query: 169 YTNSPYVKGARFYVTVGRNQLAAK----EVEIGRYYLKRGEYVAAIP--RFQLVLANY-S 221 N + + + LA E+ +Y + Y+ A R L Sbjct: 817 LGNEEEI------IFTATDLLADTKLAPELSNEAHYYRAKAYLDAGKTDRAMEDLKILAK 870 Query: 222 DAEHAE--EAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270 D + EA ++ + Y D+A +EV++ I+ P YW L+ Sbjct: 871 DTRNVYGAEAKYKVAQIYFDGGQTDKAEQEVLNYIEVSTPHTYWLARSFVLL 922 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 24/153 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +YE + + +SKA + + +++ + L + + +A E+ Sbjct: 248 LYELGMSYYYTGVYSKAAATLGEMASVH--DALSQNAYLHMGLAYLNLKERNRARMAFEQ 305 Query: 120 YITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + V + Y + + + R + + NSPY + Sbjct: 306 -AANFSFDPKVKEQALYNYALCIHETSYS------PFAESVTVFERFLNEFPNSPYTERV 358 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Y+ Y+ Y AA+ Sbjct: 359 NDYLIEV--------------YMNTRSYEAALK 377 >gi|213027104|ref|ZP_03341551.1| hypothetical protein Salmonelentericaenterica_33679 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 262 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 50/156 (32%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + R R L + Y A+ +++++ A F + +P Sbjct: 115 SGAATAADPRSGCRYGNLRAPVQSGDANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPD 174 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S Y VG+ + Sbjct: 175 STYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGV--------IM 226 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 227 QDKGDTAKAKAVYQQVINKYPGTDGAKQAQKRLNAM 262 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + +++Y +S Y A +++ Sbjct: 141 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN----------- 189 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 190 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKY 246 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 247 PGTDGAKQAQK 257 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I +YP+S Y +G + Y + +V+ Y Sbjct: 159 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 210 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A + V V +G+ A +Q V+ Y + A++A Sbjct: 211 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 256 Query: 231 ARL 233 RL Sbjct: 257 KRL 259 >gi|298529948|ref|ZP_07017350.1| tol-pal system protein YbgF [Desulfonatronospira thiodismutans ASO3-1] gi|298509322|gb|EFI33226.1| tol-pal system protein YbgF [Desulfonatronospira thiodismutans ASO3-1] Length = 245 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 51/129 (39%), Gaps = 15/129 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 ++ +D++ + Q ++ Y P A +++ +Y+ Sbjct: 129 YNQALELYFDEQ-AEQARQAFREFIDTYPEHPLAPNAWYWLAET-------------FYM 174 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + EY +I F+ VL ++ + A +A+ ++ AY L AR + ++ E YP+ Sbjct: 175 E-KEYPQSILTFRQVLEHFPEDPKAPDALLKIGYAYKRLEDKRNARFYLGVLLEDYPESS 233 Query: 262 WARYVETLV 270 A + Sbjct: 234 AADKARETL 242 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 48/141 (34%), Gaps = 8/141 (5%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + +++Y +A+ ++ +A + F + +P +A + A Sbjct: 113 KNEKEPDKPASEAKQLYNQALELYFDEQAEQARQAFREFIDTYPEHPLAPNAWYWLAETF 172 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y +Y Q+ + + +PE +G +Y ++ + Y+ Sbjct: 173 YMEKEYPQSILTFRQVLEHFPEDPKAPDALLKIGYAYKRLEDK--------RNARFYLGV 224 Query: 165 IVERYTNSPYVKGARFYVTVG 185 ++E Y S AR + Sbjct: 225 LLEDYPESSAADKARETLDSL 245 Score = 36.6 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 30/93 (32%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 RQ+ R+ Y A F E+ + ++ F Q FP A +LL Sbjct: 144 ARQAFREFIDTYPEHPLAPNAWYWLAETFYMEKEYPQSILTFRQVLEHFPEDPKAPDALL 203 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 + + A + YPES D Sbjct: 204 KIGYAYKRLEDKRNARFYLGVLLEDYPESSAAD 236 >gi|254522781|ref|ZP_05134836.1| putative secreted protein [Stenotrophomonas sp. SKA14] gi|219720372|gb|EED38897.1| putative secreted protein [Stenotrophomonas sp. SKA14] Length = 272 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 46/137 (33%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S+ +R Y A LK + + + F + +P A +L Y+ Sbjct: 138 SLAATGDERTSYNVAFESLKAGKYDDSAQLFLSFLQLYPNGVYAPNALYWLGESYYATRN 197 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + E +++YP VG+S + Q + +V +Y Sbjct: 198 FPMAETQFRELLSRYPTHDKAAGGLLKVGLSQY--------GEGKVDQAQQTLETVVAQY 249 Query: 170 TNSPYVKGARFYVTVGR 186 S + A+ + R Sbjct: 250 PGSDAARTAQDRLQSIR 266 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q ++ Y N Y A +++ G Y + A +F+ + Sbjct: 163 DSAQLFLSFLQLYPNGVYAPNALYWL--------------GESYYATRNFPMAETQFREL 208 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 L+ Y + A + ++ + +D+A++ + + +YP AR + ++ Sbjct: 209 LSRYPTHDKAAGGLLKVGLSQYGEGKVDQAQQTLETVVAQYPGSDAARTAQDRLQ 263 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 45/140 (32%), Gaps = 22/140 (15%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 ++ AF AGKY +A L ++ YP Y +G SY Sbjct: 145 ERTSYNVAFESLKAGKYDDSAQLFLSFLQLYPNGVYAPNALYWLGESYYATRNFPM---- 200 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 ++ RY ++ A +++G G+ A Sbjct: 201 ----AETQFRELLSRYPT--------------HDKAAGGLLKVGLSQYGEGKVDQAQQTL 242 Query: 214 QLVLANYSDAEHAEEAMARL 233 + V+A Y ++ A A RL Sbjct: 243 ETVVAQYPGSDAARTAQDRL 262 >gi|325522841|gb|EGD01310.1| tol-pal system protein YbgF [Burkholderia sp. TJI49] Length = 249 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T + + A + NF A F +P + + QY+ Sbjct: 121 EGTVQPGETDALSAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRD 180 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ + + + +++YP+ +G + Q+A + ++V +Y Sbjct: 181 YRGSTATWQAIVSKYPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFEQVVSQY 232 Query: 170 TNSPYVKGARFYVTVGR 186 S + A+ + + Sbjct: 233 AGSNAAQTAQGKLETIK 249 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 35/109 (32%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y SPY A++++ A + +Y + Sbjct: 142 GNFKAAAASFRSFIAKYPQSPYQPTAQYWLGN-----AQYAL---------RDYRGSTAT 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q +++ Y A +A+ + + A++ + +Y Sbjct: 188 WQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 236 Score = 38.9 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 25/66 (37%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + + G + AA F+ +A Y + + A L A AL + I Sbjct: 132 LSAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQAI 191 Query: 254 QERYPQ 259 +YPQ Sbjct: 192 VSKYPQ 197 >gi|303248292|ref|ZP_07334554.1| tol-pal system protein YbgF [Desulfovibrio fructosovorans JJ] gi|302490317|gb|EFL50229.1| tol-pal system protein YbgF [Desulfovibrio fructosovorans JJ] Length = 413 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 36/108 (33%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K A +A+ G + + + +Y ++ A F Sbjct: 292 KAAYNRALQLAINGNAGAAKAAFEQFLAANPKSPLAPNALYWVGEGAFSSGDYKTAIGDF 351 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 + ++ +P A +L A Q G +A + E Y+ YP ++ Sbjct: 352 EKVAKGWPGHSKAADALYKMAMAQEKTGDTAEARASYERYLKDYPNAE 399 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 42/134 (31%), Gaps = 8/134 (5%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T ++ Y +A+ N A F Q P + +A +L +S+G Y+ Sbjct: 286 TASPAEKAAYNRALQLAINGNAGAAKAAFEQFLAANPKSPLAPNALYWVGEGAFSSGDYK 345 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A E+ +P Y + M+ + T R ++ Y N Sbjct: 346 TAIGDFEKVAKGWPGHSKAADALYKMAMAQEKT--------GDTAEARASYERYLKDYPN 397 Query: 172 SPYVKGARFYVTVG 185 + R + Sbjct: 398 AELAGLVRQKLQTL 411 Score = 42.4 bits (99), Expect = 0.069, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 31/100 (31%), Gaps = 14/100 (14%) Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + + SP A ++ +G G+Y AI F+ V + Sbjct: 314 FEQFLAANPKSPLAPNALYW--------------VGEGAFSSGDYKTAIGDFEKVAKGWP 359 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A +A+ ++ A EAR + YP Sbjct: 360 GHSKAADALYKMAMAQEKTGDTAEARASYERYLKDYPNAE 399 >gi|322833829|ref|YP_004213856.1| tol-pal system protein YbgF [Rahnella sp. Y9602] gi|321169030|gb|ADW74729.1| tol-pal system protein YbgF [Rahnella sp. Y9602] Length = 263 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 51/148 (34%), Gaps = 9/148 (6%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVAR 94 G + + Y AV L+++ + +A F + +P + Sbjct: 121 SGSAATTPDAGAAQAPASTGDVNSDYNAAVSLALEKKQYDEAIAAFQSFVKKYPDSTYQP 180 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 + + Y+ GK AA + YP+S + VG+ + ++ Sbjct: 181 NANYWLGQLYYNKGKKDDAAYYFAVVVKNYPKSPKSSDAMFKVGV--------IMQEKGQ 232 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYV 182 +++V++Y N+ K A+ + Sbjct: 233 ADKAKAVFAQVVKQYPNTDAAKQAQKRL 260 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 51/129 (39%), Gaps = 14/129 (10%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S + +++ + V++Y +S Y A +++ G+ Sbjct: 144 SDYNAAVSLALEKKQYDEAIAAFQSFVKKYPDSTYQPNANYWL--------------GQL 189 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y +G+ A F +V+ NY + + +AM ++ D+A+ V + + ++YP Sbjct: 190 YYNKGKKDDAAYYFAVVVKNYPKSPKSSDAMFKVGVIMQEKGQADKAKAVFAQVVKQYPN 249 Query: 260 GYWARYVET 268 A+ + Sbjct: 250 TDAAKQAQK 258 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 22/126 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y +A + + ++ +YP+S Y +G Y + Y + +V+ Sbjct: 157 KQYDEAIAAFQSFVKKYPDSTYQPNANYWLGQLYYNKGKKDD--------AAYYFAVVVK 208 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SP A F V V ++G+ A F V+ Y + + A+ Sbjct: 209 NYPKSPKSSDAMFKVGVIMQ--------------EKGQADKAKAVFAQVVKQYPNTDAAK 254 Query: 228 EAMARL 233 +A RL Sbjct: 255 QAQKRL 260 >gi|94268878|ref|ZP_01291311.1| TPR repeat [delta proteobacterium MLMS-1] gi|93451429|gb|EAT02275.1| TPR repeat [delta proteobacterium MLMS-1] Length = 374 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 45/125 (36%), Gaps = 8/125 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y++ L+E ++ +AY+ ++ + A + + Y G+Y+ A + Sbjct: 258 YQQGKNHLEEGDYRQAYDLLSRHLEETATGDQAADTRFLLGESLYGQGEYELAILEYQRV 317 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I ++P + GM++ ++ R R+ + +S AR Sbjct: 318 IAEFPNHDRIPRALLRQGMAFEEL--------REPSTATIIYERLAGDHPDSEEAAQARQ 369 Query: 181 YVTVG 185 + Sbjct: 370 RLQEM 374 >gi|325104639|ref|YP_004274293.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter saltans DSM 12145] gi|324973487|gb|ADY52471.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter saltans DSM 12145] Length = 1008 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y L+ +N+ KA Y ++ + + L A + + Y A S Sbjct: 518 YALGYAALEGENYGKAATYLDKFLKGNEKDQSTINDATLRLADAYFGSKNYGAALSYYNR 577 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I S+ DY + G+ M +Q TK+ + ++ ++ NS Y A Sbjct: 578 IIASKTSSE--DYALFQRGVIEGLM------NQPDTKIA--TLQSLLNKFPNSNYADDAG 627 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 EI Y G+ + ++ Y + + A+ + Y Sbjct: 628 --------------FEIAYTYFLIGQGEKSRSDLVALIEKYPRSSYVPRALVTIGLVYYD 673 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271 A + + Y A+ L++ Sbjct: 674 QQNDAAALDAFKKVVSEYKSTDEAQQAIKLIE 705 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 62/209 (29%), Gaps = 36/209 (17%) Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 FP + A + A+ + G+ +++ S I +YP S V Sbjct: 607 IATLQSLLNKFPNSNYADDAGFEIAYTYFLIGQGEKSRSDLVALIEKYPRSSYVPRALVT 666 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN--------- 187 +G+ Y DQ+ L ++V Y ++ + A + Sbjct: 667 IGLVYY--------DQQNDAAALDAFKKVVSEYKSTDEAQQAIKLIERIYIDSGNATGFI 718 Query: 188 -----------QLAAKE---VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 +A ++ + RG++ A+ + A ++A Sbjct: 719 DYANTTSIGNYTVAEQDNIMFQAANARYLRGDWNGAVESINAYFDKFPKAIQDKQAKFIR 778 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYW 262 E+Y L ++I Y W Sbjct: 779 AESYKNLGKY-----APAIIDYEYILNDW 802 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 18/115 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSR-DFPFAGVARK----SLLMSAFVQYSAG-----KY 110 Y+ A+ L++ ++ A F + ++ + A S + Y A K Sbjct: 32 YKNALELLEKGKYATASSLFRDVEKLNYTTSEQADNRVDISEIKINAQYYRALCALELKN 91 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 A L +I Q+PES Y+ VG Y + Q K L + +++ Sbjct: 92 DDAIDLFLSFIRQHPESAKTKQAYFQVGRYYFR--------QANYKEALNWFTKV 138 >gi|38637810|ref|NP_942784.1| hypothetical protein PHG146 [Ralstonia eutropha H16] gi|32527148|gb|AAP85898.1| conserved hypothetical protein [Ralstonia eutropha H16] Length = 166 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 50/141 (35%), Gaps = 8/141 (5%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V T ++ Y+ A+ + +F A F+ + +P + + Y Sbjct: 34 VEDRQGTSQPGEKPEYDAALKHFQAGDFKSAGNAFSSFIKKYPQSPYLPLAQYWLGNSLY 93 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + Y+ + + + I P V ++ ++ Q+ Q+A + + ++ Sbjct: 94 AQRDYKGSTWVLHKMIDANPRHPKVPDA--MIAVANNQLESG----QKAAGR--ETLEQV 145 Query: 166 VERYTNSPYVKGARFYVTVGR 186 V +Y + + A + + Sbjct: 146 VAKYPGTEGARAADNRLKTLK 166 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 40/119 (33%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K S +++Y SPY+ A++++ + R Y K +V Sbjct: 59 GDFKSAGNAFSSFIKKYPQSPYLPLAQYWL--------GNSLYAQRDY-KGSTWV----- 104 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++ +AM + + RE + + +YP AR + +K Sbjct: 105 LHKMIDANPRHPKVPDAMIAVANNQLESGQKAAGRETLEQVVAKYPGTEGARAADNRLK 163 >gi|58581293|ref|YP_200309.1| hypothetical protein XOO1670 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623211|ref|YP_450583.1| hypothetical protein XOO_1554 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58425887|gb|AAW74924.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367151|dbj|BAE68309.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 272 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 43/130 (33%), Gaps = 8/130 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +R Y A LK + A + F +P +L Y+ +Q A + Sbjct: 145 ERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQ 204 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + +++YP +G+S ++ + + + +Y S + Sbjct: 205 FRDLVSRYPTHDKAAGGLLKLGLSQYGEGKN--------NEAQRTLQHVASQYPGSDAAR 256 Query: 177 GARFYVTVGR 186 A+ + R Sbjct: 257 VAQERLQSIR 266 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 41/115 (35%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q +E Y N Y A +++ G Y + A +F+ + Sbjct: 163 DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 208 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++ Y + A + +L + +EA+ + + +YP AR + ++ Sbjct: 209 VSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQRTLQHVASQYPGSDAARVAQERLQ 263 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 23/58 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 LK G+Y A F L Y + + A+ L E+Y A A + RYP Sbjct: 156 LKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 213 >gi|298529295|ref|ZP_07016698.1| tol-pal system protein YbgF [Desulfonatronospira thiodismutans ASO3-1] gi|298510731|gb|EFI34634.1| tol-pal system protein YbgF [Desulfonatronospira thiodismutans ASO3-1] Length = 292 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 65/143 (45%), Gaps = 10/143 (6%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S D L+ V D + R +Y++A+ ++ + +A + + + ++P + + Sbjct: 156 SDDPDLEPVGDPQTARALYQRALDSFYDREYERAQSLWEEFAENYPEHDLISNAYFWQGE 215 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY- 161 Y +Y +AA +E I+ YP+S + GMS+ ++ R + Q Sbjct: 216 SFYQMQEYAEAALAYQEVISNYPDSNKITASMLKQGMSFIELGR---------EEAGQLV 266 Query: 162 MSRIVERYTNSPYVKGARFYVTV 184 ++ ++E Y +S + AR +++ Sbjct: 267 LNELLEEYPDSAEARRARAFISE 289 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 47/145 (32%), Gaps = 22/145 (15%) Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 Y + D YD R + E Y + A F+ Sbjct: 165 GDPQTARALYQRAL-------DSFYD-REYERAQSLWEEFAENYPEHDLISNAYFWQ--- 213 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 G + + EY A +Q V++NY D+ +M + +++ L + Sbjct: 214 -----------GESFYQMQEYAEAALAYQEVISNYPDSNKITASMLKQGMSFIELGREEA 262 Query: 246 AREVVSLIQERYPQGYWARYVETLV 270 + V++ + E YP AR + Sbjct: 263 GQLVLNELLEEYPDSAEARRARAFI 287 >gi|188577426|ref|YP_001914355.1| tol-pal system protein YbgF, putative [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521878|gb|ACD59823.1| tol-pal system protein YbgF, putative [Xanthomonas oryzae pv. oryzae PXO99A] Length = 268 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 43/130 (33%), Gaps = 8/130 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +R Y A LK + A + F +P +L Y+ +Q A + Sbjct: 141 ERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQ 200 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + +++YP +G+S ++ + + + +Y S + Sbjct: 201 FRDLVSRYPTHDKAAGGLLKLGLSQYGEGKN--------NEAQRTLQHVASQYPGSDAAR 252 Query: 177 GARFYVTVGR 186 A+ + R Sbjct: 253 VAQERLQSIR 262 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 41/115 (35%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q +E Y N Y A +++ G Y + A +F+ + Sbjct: 159 DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 204 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++ Y + A + +L + +EA+ + + +YP AR + ++ Sbjct: 205 VSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQRTLQHVASQYPGSDAARVAQERLQ 259 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 23/58 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 LK G+Y A F L Y + + A+ L E+Y A A + RYP Sbjct: 152 LKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 209 >gi|254458707|ref|ZP_05072131.1| competence lipoprotein [Campylobacterales bacterium GD 1] gi|207084473|gb|EDZ61761.1| competence lipoprotein [Campylobacterales bacterium GD 1] Length = 294 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 68/186 (36%), Gaps = 4/186 (2%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L F ++ ++ + S+++ + V + Y K V + + + KA Y++ Sbjct: 3 LKSSFFLSAFAVIIFFSGCSKELEEYNKPAVYW----YGKIVKNISDGDLEKADNYYSSL 58 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + + + ++ ++ A +Y + EYI +Y + + +L S Sbjct: 59 QGEHIGSPLLPEATMILAIAHMYYEEYLLSEHFLNEYIKRYATANEKEDAEFLKIKSKYL 118 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 + + DQ + ++ + Y NS Y T AA I Y++ Sbjct: 119 ALPNPRRDQALIEEAIKEAQKFKHNYPNSMYYAVVDTMQTRLYMAEAALNETIADLYVRL 178 Query: 204 GEYVAA 209 + +A Sbjct: 179 DKPKSA 184 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 10/84 (11%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVAL-------ALMDE 245 + I Y EY+ + + Y+ A E+A +++ Y+AL AL++E Sbjct: 75 LAIAHMYY--EEYLLSEHFLNEYIKRYATANEKEDAEFLKIKSKYLALPNPRRDQALIEE 132 Query: 246 AREVVSLIQERYPQGYWARYVETL 269 A + + YP + V+T+ Sbjct: 133 AIKEAQKFKHNYPNSMYYAVVDTM 156 >gi|94987495|ref|YP_595428.1| hypothetical protein LI1053 [Lawsonia intracellularis PHE/MN1-00] gi|94731744|emb|CAJ55107.1| uncharacterized protein conserved in bacteria [Lawsonia intracellularis PHE/MN1-00] Length = 305 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 54/143 (37%), Gaps = 10/143 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 Q++ + + +Y+ V E+ + +A + F + + + + Sbjct: 166 GAQTNSQPKQSTPNKIDTATVLYDTGVKLFNERKYKEALQSFTDFTNTYGTHKLISNAWF 225 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 Y G Y AA E+ I++YP+S + Y+ + + + K Sbjct: 226 WRGEANYQLGSYPAAALDYEQVISKYPKSGKIVSCYFKQALCFYK---------TGKKDA 276 Query: 159 LQY-MSRIVERYTNSPYVKGARF 180 ++ + +++++ SP K A+ Sbjct: 277 AKFRLEEVIKKFPTSPEAKRAKQ 299 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 22/129 (17%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++ KY++A ++ Y K + ++ G + Q+ + + Sbjct: 195 FNERKYKEALQSFTDFTNTYGTHKLISNAWFWRGEANYQL--------GSYPAAALDYEQ 246 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 ++ +Y S + F + +Y K G+ AA R + V+ + + Sbjct: 247 VISKYPKSGKIVSCYFKQALC-------------FY-KTGKKDAAKFRLEEVIKKFPTSP 292 Query: 225 HAEEAMARL 233 A+ A L Sbjct: 293 EAKRAKQIL 301 Score = 42.8 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 47/147 (31%), Gaps = 22/147 (14%) Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 P + V Y G+ +R K LQ + Y + A F+ Sbjct: 178 PNKIDTATVLYDTGVKLFN--------ERKYKEALQSFTDFTNTYGTHKLISNAWFWRGE 229 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 QL G Y AA ++ V++ Y + + + D Sbjct: 230 ANYQL--------------GSYPAAALDYEQVISKYPKSGKIVSCYFKQALCFYKTGKKD 275 Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271 A+ + + +++P A+ + ++K Sbjct: 276 AAKFRLEEVIKKFPTSPEAKRAKQILK 302 >gi|159030624|emb|CAO88292.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 722 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 86/234 (36%), Gaps = 29/234 (12%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 +DV + + R Y A+ L++ A + + +P +A + LL Sbjct: 72 KDVADANAPSLDRSRARYLLAMDLLRKYEGGPALKQLEGLEKQYP--VLAPQILLKQGRA 129 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM---SYAQ-MIRDVPYDQRATKLML 159 + ++A + ++ I YP+S V YY +G SY + +++ P R L+ Sbjct: 130 HELSNDSERAREIWQKLIKTYPQSPVVAEAYYSLGKYDPSYQEKLLKQYPRHPRTLALIR 189 Query: 160 QYMSRIVERYTNSPYVKGARFY-----VTVGRNQLAA---KEVEIGRY------YLKRGE 205 Q + +++ +++ A+ + R++L ++ + Y + G Sbjct: 190 QRLQENPDQFP--LWLQLAKANPFDPTLNQARDRLVKDYANQLTPADWAMIGAGYWQSGL 247 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y A + E+A R + EAR + + YPQ Sbjct: 248 YEKAYKAYAKA------TPSPEQA-YRYARGLQIAKKLPEARSAYQKLIKTYPQ 294 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 36/240 (15%), Positives = 73/240 (30%), Gaps = 29/240 (12%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 A+ W+ Y + Y A + +A + + + +P A Sbjct: 236 AMIGAGYWQSGLYEKAYKAYAKATPSPEQAYRYARGLQIAKKLPEARSAYQKLIKTYPQA 295 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 LL A + A + + + Q+P+ +++ Sbjct: 296 PETGLGLLRLA----QISPNRDAIAYLDRIVKQFPD--RAPEALEAKA----KLLNS--- 342 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 + Q ++ +Y S R +A + K G+Y A Sbjct: 343 --TNAQAASQTWQTLLNKYPKSDEAAD-------YRWLMAQRA-------AKSGDYAKAW 386 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 Q + N D++ A +A + + L EA++ + R+P Y+A L+ Sbjct: 387 QWAQPIAVNNPDSQTAPKAAFWVGKWAQKLGKNQEAKQAFTYTISRHPHSYYAWRSAVLL 446 >gi|303326957|ref|ZP_07357399.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3] gi|302862945|gb|EFL85877.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3] Length = 406 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 42/133 (31%), Gaps = 8/133 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + + Y+ A+ + ++ F + + +P + Y+ G Sbjct: 278 KPAASAKGEDAAYKAALKVALSGHSAEGISRFREFLQQYPQGRYTANAEYWIGECLYAQG 337 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 Y++A + + T YP GMS +++ Q ++ Sbjct: 338 NYKEALAQFQTVNTNYPRHHKNADALLKAGMSLSRLGDKPG--------AAQKYRTLLAD 389 Query: 169 YTNSPYVKGARFY 181 + NS + AR Sbjct: 390 FPNSEAARMARSR 402 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 35/114 (30%), Gaps = 14/114 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + + +++Y Y A +++ +G Y A+ + Sbjct: 300 GHSAEGISRFREFLQQYPQGRYTANAEYWIGECL--------------YAQGNYKEALAQ 345 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 FQ V NY +A+ + + L A + + +P AR Sbjct: 346 FQTVNTNYPRHHKNADALLKAGMSLSRLGDKPGAAQKYRTLLADFPNSEAARMA 399 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 26/140 (18%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A K+ L A +G + S E++ QYP+ + Y +G Q Sbjct: 289 AYKAALKVA----LSGHSAEGISRFREFLQQYPQGRYTANAEYWIGECLYA--------Q 336 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K L + Y A + ++L K A + Sbjct: 337 GNYKEALAQFQTVNTNYPRHHKNADALLKAGMSLSRLGDK--------------PGAAQK 382 Query: 213 FQLVLANYSDAEHAEEAMAR 232 ++ +LA++ ++E A A +R Sbjct: 383 YRTLLADFPNSEAARMARSR 402 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 24/79 (30%), Gaps = 14/79 (17%) Query: 205 EYVAA------------IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 Y AA I RF+ L Y + A + E A EA Sbjct: 289 AYKAALKVALSGHSAEGISRFREFLQQYPQGRYTANAEYWIGECLYAQGNYKEALAQFQT 348 Query: 253 IQERYPQGYWARYVETLVK 271 + YP + + L+K Sbjct: 349 VNTNYP--RHHKNADALLK 365 >gi|167041145|gb|ABZ05905.1| hypothetical protein ALOHA_HF4000001A02ctg1g30 [uncultured marine microorganism HF4000_001A02] Length = 161 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 47/132 (35%), Gaps = 8/132 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA-GKYQQA 113 + +++ KA +A E P ++ + + A V Y + A Sbjct: 22 KSAEDLFSKAEQKRNMGEAKEALELLKTIVDKHPEHEISPDAQYLIAEVYYRDMRDFTTA 81 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + Q+P+SK V + ++ G A M+ D + +Y + +E+Y N Sbjct: 82 IKQYGDLRIQFPDSKQVPFSLFMQGFISANMLADF-------EKAKEYYTEFLEKYPNHE 134 Query: 174 YVKGARFYVTVG 185 + F + Sbjct: 135 LYQSVGFELKYL 146 Score = 42.0 bits (98), Expect = 0.089, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 43/116 (37%), Gaps = 14/116 (12%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 + K L+ + IV+++ A++ + YY ++ A Sbjct: 35 RNMGEAKEALELLKTIVDKHPEHEISPDAQYLIAEV-------------YYRDMRDFTTA 81 Query: 210 IPRFQLVLANYSDAEHAEEAMARLV-EAYVALALMDEAREVVSLIQERYPQGYWAR 264 I ++ + + D++ ++ + LA ++A+E + E+YP + Sbjct: 82 IKQYGDLRIQFPDSKQVPFSLFMQGFISANMLADFEKAKEYYTEFLEKYPNHELYQ 137 >gi|222823961|ref|YP_002575535.1| conserved hypothetical lipoprotein [Campylobacter lari RM2100] gi|222539183|gb|ACM64284.1| conserved hypothetical lipoprotein [Campylobacter lari RM2100] Length = 218 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 74/187 (39%), Gaps = 7/187 (3%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K + IA FL + + D+Y S + Y++ + L+E+N A + Sbjct: 1 MKKLFIF-SLIIAGLFLGACSSKKAEDLYNLSSMEW------YQQIIKDLQEKNLEAADK 53 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 ++ + + + ++LL+ A S +Y+ A +EY+ ++ +S+NV Y+ YL Sbjct: 54 HYTSMAAEHIADPLLEQTLLILAQAHISEEEYEMANFYLDEYLNKFGDSQNVAYIRYLKI 113 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 + +Q ++ + + Y N Y +T + + I Sbjct: 114 KAKFDSFAVPNRNQALMLKTIEEIKEYNQSYPNVQYNDLIDTMLTKFNLAVFYLDTSIAE 173 Query: 199 YYLKRGE 205 Y K+ Sbjct: 174 LYQKKNR 180 >gi|312171771|emb|CBX80029.1| Hypothetical protein ybgF precursor [Erwinia amylovora ATCC BAA-2158] Length = 259 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 44/137 (32%), Gaps = 9/137 (6%) Query: 46 VYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + T Y AV L+++ + A F + +P + + + Sbjct: 127 AVASAPTQSGDANTDYNAAVALVLEKKQYDSAISAFQTFVKKYPESTYQPNANYWLGQLN 186 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y+ GK AA + YP+S + VG+ + + Sbjct: 187 YNKGKKDDAAYYFATVVKMYPKSPKSADALFKVGVIMQEKGDKA--------KAKAVYQQ 238 Query: 165 IVERYTNSPYVKGARFY 181 +++ Y +S K A+ Sbjct: 239 VIKLYPDSEAAKTAQKR 255 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 37/111 (33%), Gaps = 14/111 (12%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + V++Y S Y A +++ +G+ A F V+ Sbjct: 158 AISAFQTFVKKYPESTYQPNANYWLGQLN--------------YNKGKKDDAAYYFATVV 203 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 Y + + +A+ ++ +A+ V + + YP A+ + Sbjct: 204 KMYPKSPKSADALFKVGVIMQEKGDKAKAKAVYQQVIKLYPDSEAAKTAQK 254 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 22/122 (18%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y A S + ++ +YPES Y +G + Y + +V+ Sbjct: 153 KQYDSAISAFQTFVKKYPESTYQPNANYWLGQLNYNKGKKDD--------AAYYFATVVK 204 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SP A F V V ++G+ A +Q V+ Y D+E A+ Sbjct: 205 MYPKSPKSADALFKVGVIMQ--------------EKGDKAKAKAVYQQVIKLYPDSEAAK 250 Query: 228 EA 229 A Sbjct: 251 TA 252 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 28/66 (42%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ +Y +AI FQ + Y ++ + A L + D+A + + + YP+ Sbjct: 150 LEKKQYDSAISAFQTFVKKYPESTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKMYPKS 209 Query: 261 YWARYV 266 + Sbjct: 210 PKSADA 215 >gi|222054196|ref|YP_002536558.1| tol-pal system protein YbgF [Geobacter sp. FRC-32] gi|221563485|gb|ACM19457.1| tol-pal system protein YbgF [Geobacter sp. FRC-32] Length = 275 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 55/150 (36%), Gaps = 8/150 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G++ + + + +Y+K + L++ + K+ EY ++ FP +A Sbjct: 134 GFDEFQKKMAEAKAAEAEQTPEALYQKGLETLRKGDPQKSREYLSRFLELFPKHDLAANV 193 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 YS KY QA +E I Y ++ + M++ ++ K Sbjct: 194 HYWLGETYYSEKKYDQAILEFQEIIKNYSGNEKIPAAMLKQAMAFKEL--------GDAK 245 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 ++ E Y ++ + A+ + + Sbjct: 246 SARYVYKKVAEDYPHTDEARIAKEKLKDLK 275 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 48/141 (34%), Gaps = 22/141 (15%) Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 Y G+ + + +Y+SR +E + +++ Sbjct: 154 PEALYQKGLETLRK--------GDPQKSREYLSRFLELFPKHDLAANVHYWL-------- 197 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 G Y +Y AI FQ ++ NYS E AM + A+ L AR V Sbjct: 198 ------GETYYSEKKYDQAILEFQEIIKNYSGNEKIPAAMLKQAMAFKELGDAKSARYVY 251 Query: 251 SLIQERYPQGYWARYVETLVK 271 + E YP AR + +K Sbjct: 252 KKVAEDYPHTDEARIAKEKLK 272 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 50/130 (38%), Gaps = 22/130 (16%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 G Q++ ++ +P+ V+Y +G +Y + YDQ + I Sbjct: 166 RKGDPQKSREYLSRFLELFPKHDLAANVHYWLGETYYSEKK---YDQ-----AILEFQEI 217 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 ++ Y+ + + A + + +A KE+ + +A ++ V +Y + Sbjct: 218 IKNYSGNEKIPAA-----MLKQAMAFKELGDAK---------SARYVYKKVAEDYPHTDE 263 Query: 226 AEEAMARLVE 235 A A +L + Sbjct: 264 ARIAKEKLKD 273 >gi|187479387|ref|YP_787412.1| hypothetical protein BAV2917 [Bordetella avium 197N] gi|115423974|emb|CAJ50527.1| putative exported protein [Bordetella avium 197N] Length = 228 Score = 62.4 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 18/133 (13%), Positives = 47/133 (35%), Gaps = 8/133 (6%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 ++ ++ A ++ + +A E + +P + +A + +Y++ Y+ Sbjct: 104 GDPQEQAAFDGATDLYRKGQYKEAAESLAAFTALYPNSDLAPTAQFYLGSARYASRDYKG 163 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A + + P++ ++ S ++ + RIV Y NS Sbjct: 164 AIEQLSNLLQKSPDNARAPDALLVIAGSQIELNNRAG--------AKTTLQRIVRDYPNS 215 Query: 173 PYVKGARFYVTVG 185 P A+ + + Sbjct: 216 PAANTAKSRLQLL 228 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 14/116 (12%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 K + ++ Y NS A+FY+ R Y R Y AI + Sbjct: 125 KEAAESLAAFTALYPNSDLAPTAQFYLGSAR-------------YASRD-YKGAIEQLSN 170 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 +L D A +A+ + + + L A+ + I YP A ++ ++ Sbjct: 171 LLQKSPDNARAPDALLVIAGSQIELNNRAGAKTTLQRIVRDYPNSPAANTAKSRLQ 226 >gi|317052296|ref|YP_004113412.1| tetratricopeptide repeat-containing protein [Desulfurispirillum indicum S5] gi|316947380|gb|ADU66856.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfurispirillum indicum S5] Length = 293 Score = 62.4 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 47/129 (36%), Gaps = 8/129 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +Y++A+ F + F +A F+Q ++FP + +A SL + Y+ Y A Sbjct: 171 PSPLYDQAMNFYRIGEFPQALIAFDQVFKNFPTSNLADNSLYWIGEIYYAQNDYVSAFEY 230 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + QYP+ Y G + + Q L ++ + + P + Sbjct: 231 FDRVTRQYPDGSKTPDAYLKKGFALER--------QGKYAEALDVLNYTANMFPDHPVLP 282 Query: 177 GARFYVTVG 185 A + Sbjct: 283 LAEQMIRQL 291 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 37/94 (39%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 V+ + T +Y ++ + ++ A+EYF++ +R +P + L F Sbjct: 195 DQVFKNFPTSNLADNSLYWIGEIYYAQNDYVSAFEYFDRVTRQYPDGSKTPDAYLKKGFA 254 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 GKY +A + +P+ + ++ Sbjct: 255 LERQGKYAEALDVLNYTANMFPDHPVLPLAEQMI 288 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 37/133 (27%), Gaps = 22/133 (16%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L A Y G++ QA ++ +P S D Y +G Y V Sbjct: 174 LYDQAMNFYRIGEFPQALIAFDQVFKNFPTSNLADNSLYWIGEIYYAQNDYVS------- 226 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 +Y R+ +Y + A ++G+Y A+ Sbjct: 227 -AFEYFDRVTRQYPDGSKTPDAYLKKGFALE--------------RQGKYAEALDVLNYT 271 Query: 217 LANYSDAEHAEEA 229 + D A Sbjct: 272 ANMFPDHPVLPLA 284 Score = 42.4 bits (99), Expect = 0.067, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 34/104 (32%), Gaps = 16/104 (15%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-IGRYYLKRGEYVAAIPRFQL 215 L ++ + + S LA + IG Y + +YV+A F Sbjct: 189 QALIAFDQVFKNFPTS---------------NLADNSLYWIGEIYYAQNDYVSAFEYFDR 233 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 V Y D +A + A EA +V++ +P Sbjct: 234 VTRQYPDGSKTPDAYLKKGFALERQGKYAEALDVLNYTANMFPD 277 Score = 38.9 bits (90), Expect = 0.80, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +Y + GE+ A+ F V N+ + A+ ++ + E Y A A E + +Y Sbjct: 180 NFY-RIGEFPQALIAFDQVFKNFPTSNLADNSLYWIGEIYYAQNDYVSAFEYFDRVTRQY 238 Query: 258 PQGYWARYVE 267 P G Sbjct: 239 PDGSKTPDAY 248 >gi|118594346|ref|ZP_01551693.1| TPR repeat [Methylophilales bacterium HTCC2181] gi|118440124|gb|EAV46751.1| TPR repeat [Methylophilales bacterium HTCC2181] Length = 293 Score = 62.4 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 52/140 (37%), Gaps = 8/140 (5%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 + + D + Y++A L+ + +A+ F++ +P A ++ + Q+ Sbjct: 157 TEVPPLIDKNIEVAAYDEANALLRATKYQEAFIAFDRFISAYPKAEKIAEAKYNLGYAQF 216 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + Y A + I + +S V Y + Q+ + + + + Sbjct: 217 ALKNYNAAIKTYSKVIELHVDSAIVPESMYGIANCEIQLAK--------IGNAKKTLRDL 268 Query: 166 VERYTNSPYVKGARFYVTVG 185 ++R+ N+ + A+ + Sbjct: 269 MQRFPNAEIIPKAKTRLKAL 288 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 43/116 (37%), Gaps = 14/116 (12%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + R + Y + + A++ + + L Y AAI + Sbjct: 185 QEAFIAFDRFISAYPKAEKIAEAKYNLGYAQFAL--------------KNYNAAIKTYSK 230 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 V+ + D+ E+M + + LA + A++ + + +R+P +T +K Sbjct: 231 VIELHVDSAIVPESMYGIANCEIQLAKIGNAKKTLRDLMQRFPNAEIIPKAKTRLK 286 >gi|227537433|ref|ZP_03967482.1| TPR domain protein [Sphingobacterium spiritivorum ATCC 33300] gi|227242707|gb|EEI92722.1| TPR domain protein [Sphingobacterium spiritivorum ATCC 33300] Length = 1040 Score = 62.4 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 64/210 (30%), Gaps = 31/210 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++++ ++ + N S + +P + A + ++ G+Y QA S + Sbjct: 620 LFQRGIIQGLQGNSSGKIATLQSVVQKYPKSNYADDVAFEIPYTYFTLGQYDQAISGLQS 679 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + +YP S V +G+ + L+ R+V++Y+ + K A Sbjct: 680 MVEKYPRSSYVPRALVTIGLVQYNQDNN--------DAALKTFQRVVDQYSTTDEAKQAM 731 Query: 180 FYVTVGR------------------NQLAAKE-----VEIGRYYLKRGEYVAAIPRFQLV 216 + L+ E RG Y A+ Sbjct: 732 RSIENIYLDKGDATGYIRYATGTNIGDLSTSEQDSRAFSTATTLFSRGNYQGAVEAVNAY 791 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEA 246 + + A E+ AL EA Sbjct: 792 FDKFPKPIQEKYARFIRAESNAALGKNQEA 821 Score = 55.5 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 28/210 (13%), Positives = 66/210 (31%), Gaps = 42/210 (20%) Query: 68 LKEQNFSKAYEYFN-----------QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 + +N++ + YF + + ++ A +S Y +A + Sbjct: 552 FRNENYNTSANYFERFLSMGGKEGIELNTR-------NDAIARLADSYFSLKNYGRAMTE 604 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 ++ I ++++ DY + G+ + + +V++Y S Y Sbjct: 605 YDKLI--NSKAQSQDYALFQRGIIQGLQGNSSGK--------IATLQSVVQKYPKSNYAD 654 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 F + Y G+Y AI Q ++ Y + + A+ + Sbjct: 655 DVAFEIPYT--------------YFTLGQYDQAISGLQSMVEKYPRSSYVPRALVTIGLV 700 Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266 D A + + ++Y A+ Sbjct: 701 QYNQDNNDAALKTFQRVVDQYSTTDEAKQA 730 Score = 35.5 bits (81), Expect = 7.2, Method: Composition-based stats. Identities = 8/65 (12%), Positives = 22/65 (33%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D + ++ + ++++ KA E+F + + A+ ++ Sbjct: 132 DYPASPNSKAAYFQIGRSYYAKKDYKKAIEWFTKIDGKNLAGAENTEYRFKLAYSRFMTE 191 Query: 109 KYQQA 113 Y A Sbjct: 192 DYTSA 196 >gi|207728191|ref|YP_002256585.1| hypothetical protein RSMK04568 [Ralstonia solanacearum MolK2] gi|300704848|ref|YP_003746451.1| associated to tol-pal complex protein (ygcf) [Ralstonia solanacearum CFBP2957] gi|206591436|emb|CAQ57048.1| conserved hypothetical protein [Ralstonia solanacearum MolK2] gi|299072512|emb|CBJ43862.1| putative associated to Tol-Pal complex protein (ygcF) [Ralstonia solanacearum CFBP2957] Length = 257 Score = 62.4 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 17/129 (13%), Positives = 41/129 (31%), Gaps = 8/129 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 +++ Y+ A+ + +F A F+ + +P + + Y+ Y+ + Sbjct: 134 PGEKDEYDAALKTFQGGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGST 193 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + E P+ V Q+A + + +V +Y + Sbjct: 194 YVLENMARANPQHPKAPEALLQVA------TNQGESGQKAA--ARKTLEAVVAQYPGTEQ 245 Query: 175 VKGARFYVT 183 K A + Sbjct: 246 AKTASSRLK 254 Score = 42.8 bits (100), Expect = 0.058, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K S V++Y SPY+ A+ N L Y +R Y + Sbjct: 150 GDFKGAGNQFSAFVKKYPQSPYLPLAQ---FWLGNAL----------YAQRD-YKGSTYV 195 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + + A EA+ ++ AR+ + + +YP A+ + +K Sbjct: 196 LENMARANPQHPKAPEALLQVATNQGESGQKAAARKTLEAVVAQYPGTEQAKTASSRLK 254 >gi|222056474|ref|YP_002538836.1| Lytic transglycosylase catalytic [Geobacter sp. FRC-32] gi|221565763|gb|ACM21735.1| Lytic transglycosylase catalytic [Geobacter sp. FRC-32] Length = 717 Score = 62.4 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 74/240 (30%), Gaps = 43/240 (17%) Query: 14 AWAYQLYKFALTIFFSIAVCFLV-----------GWERQSSRDVYLDSVTDVRYQRE--- 59 L AL I FSI+ + +D + ++ + Sbjct: 1 MLFRSLTALALIILFSISASGTTLFPLPDEALQEASKHFRDKDYGPARESALKAPQSGIR 60 Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + +K + + +A Y + +FP A L A K+ +A + Sbjct: 61 DFILGMAAIKLEQWQEAISYLGYAAHNFPLLGDYA---LYNQATAFSRQDKHPEALASLG 117 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + YPES YL G + L+ + +ERY A Sbjct: 118 KMLKVYPESPINRAAIYLKGNELYASGNFID--------ALKTYTDFIERYPQGADSLTA 169 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA---MARLVE 235 + + R QL G+ AA + + NY + +A + RL + Sbjct: 170 LYRSALCREQL--------------GDPAAAASILRSIPINYPASSLTPKASLDLERLAQ 215 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 56/167 (33%), Gaps = 15/167 (8%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A F ++ +A + + +P + + R ++ + Y++G + A + Sbjct: 96 LYNQATAFSRQDKHPEALASLGKMLKVYPESPINRAAIYLKGNELYASGNFIDALKTYTD 155 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I +YP+ + Y + Q+ + I Y S A Sbjct: 156 FIERYPQGADSLTALYRSALCREQL--------GDPAAAASILRSIPINYPASSLTPKAS 207 Query: 180 FYVTVG------RNQLAAKEVE-IGRYYLKRGEYVAAIPRFQLVLAN 219 + L+ E+ G G+Y AI F VL Sbjct: 208 LDLERLAQTGIKIEPLSTNEIFRQGTILFDLGKYAQAIKTFDSVLQK 254 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 77/237 (32%), Gaps = 30/237 (12%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQNFSKAYEYFNQCSRD 86 L + + DSV E+ ++KA K +++ A + F + Sbjct: 232 GTILFDLGKYAQAIKTFDSVLQKSSNPEINVRFQFKKAQALFKSRHYKDAEQLFTALGKV 291 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 + + A GK +A S +P++ D + A IR Sbjct: 292 NSGKVLNGEIRFWLARTLAKNGKEDEAVSAYLLLADTWPKAALADDA-----LLEAAQIR 346 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 Q+ T Q + R + Y S K + + R + +Y Sbjct: 347 KS---QKKTDEAQQLLQRSLFLYPESGLKKSLLWEIAWER--------------YQAKDY 389 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 AA F LA Y + + A+ ++ A + A+ S + +P GY+A Sbjct: 390 KAASDWFGK-LAGYEN--ARDRALYWRGKSLAAAGDQEGAKASFSQLMTEFPLGYYA 443 >gi|95929134|ref|ZP_01311878.1| N-acetylmuramoyl-L-alanine amidase [Desulfuromonas acetoxidans DSM 684] gi|95134632|gb|EAT16287.1| N-acetylmuramoyl-L-alanine amidase [Desulfuromonas acetoxidans DSM 684] Length = 582 Score = 62.4 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 56/153 (36%), Gaps = 23/153 (15%) Query: 84 SRDFPFAGV--ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + + + A + QY + + + + ++ Q+P+ + YYL+G S+ Sbjct: 32 DARYAYQQLLRAPQKQ------QYRHH-WDKVFTQLQHFVDQHPDHEKAPGAYYLLGQSH 84 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + + ++ ++ + + Y + RY +S A A + E+ Sbjct: 85 -EKLYEISRVKKDARAAVDYYQSLARRYPSSSLADDALL-------FSARLQCEV----- 131 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 G AA Q++L Y + + A L Sbjct: 132 -LGAEQAARNDCQVILQRYPSGDMHKRARELLA 163 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 14/136 (10%) Query: 140 SYAQMIRDVPYDQ--RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 +Y Q++R Q + + V+++ + GA + + +L EI Sbjct: 36 AYQQLLRAPQKQQYRHHWDKVFTQLQHFVDQHPDHEKAPGAYYLLGQSHEKL----YEIS 91 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM---ARLVEAYVALALMDEAREVVSLIQ 254 R +K+ AA+ +Q + Y + A++A+ ARL L AR +I Sbjct: 92 R--VKKDA-RAAVDYYQSLARRYPSSSLADDALLFSARLQ--CEVLGAEQAARNDCQVIL 146 Query: 255 ERYPQGYWARYVETLV 270 +RYP G + L+ Sbjct: 147 QRYPSGDMHKRARELL 162 >gi|207744074|ref|YP_002260466.1| hypothetical protein RSIPO_02260 [Ralstonia solanacearum IPO1609] gi|206595478|emb|CAQ62405.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609] Length = 257 Score = 62.4 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 17/129 (13%), Positives = 41/129 (31%), Gaps = 8/129 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 +++ Y+ A+ + +F A F+ + +P + + Y+ Y+ + Sbjct: 134 PGEKDEYDAALKTFQGGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGST 193 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + E P+ V Q+A + + +V +Y + Sbjct: 194 YVLENMARANPQHPKAPEALLQVA------TNQGESGQKAA--ARKTLEAVVVQYPGTEQ 245 Query: 175 VKGARFYVT 183 K A + Sbjct: 246 AKTASSRLK 254 Score = 42.0 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K S V++Y SPY+ A+ N L Y +R Y + Sbjct: 150 GDFKGAGNQFSAFVKKYPQSPYLPLAQ---FWLGNAL----------YAQRD-YKGSTYV 195 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + + A EA+ ++ AR+ + + +YP A+ + +K Sbjct: 196 LENMARANPQHPKAPEALLQVATNQGESGQKAAARKTLEAVVVQYPGTEQAKTASSRLK 254 >gi|292487663|ref|YP_003530536.1| Hypothetical protein ybgF [Erwinia amylovora CFBP1430] gi|292898900|ref|YP_003538269.1| exported protein [Erwinia amylovora ATCC 49946] gi|291198748|emb|CBJ45857.1| putative exported protein [Erwinia amylovora ATCC 49946] gi|291553083|emb|CBA20128.1| Hypothetical protein ybgF precursor [Erwinia amylovora CFBP1430] Length = 259 Score = 62.4 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 44/137 (32%), Gaps = 9/137 (6%) Query: 46 VYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + T Y AV L+++ + A F + +P + + + Sbjct: 127 AVASAPTQSGDANTDYNAAVALVLEKKQYDSAISAFQTFVKKYPDSTYQPNANYWLGQLN 186 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y+ GK AA + YP+S + VG+ + + Sbjct: 187 YNKGKKDDAAYYFATVVKMYPKSPKSADALFKVGVIMQEKGDKA--------KAKAVYQQ 238 Query: 165 IVERYTNSPYVKGARFY 181 +++ Y +S K A+ Sbjct: 239 VIKLYPDSEAAKTAQKR 255 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 38/111 (34%), Gaps = 14/111 (12%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + V++Y +S Y A +++ +G+ A F V+ Sbjct: 158 AISAFQTFVKKYPDSTYQPNANYWLGQLN--------------YNKGKKDDAAYYFATVV 203 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 Y + + +A+ ++ +A+ V + + YP A+ + Sbjct: 204 KMYPKSPKSADALFKVGVIMQEKGDKAKAKAVYQQVIKLYPDSEAAKTAQK 254 Score = 47.0 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 45/125 (36%), Gaps = 22/125 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y A S + ++ +YP+S Y +G + Y + +V+ Sbjct: 153 KQYDSAISAFQTFVKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFATVVK 204 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SP A F V V ++G+ A +Q V+ Y D+E A+ Sbjct: 205 MYPKSPKSADALFKVGVIMQ--------------EKGDKAKAKAVYQQVIKLYPDSEAAK 250 Query: 228 EAMAR 232 A R Sbjct: 251 TAQKR 255 Score = 42.4 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 28/66 (42%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ +Y +AI FQ + Y D+ + A L + D+A + + + YP+ Sbjct: 150 LEKKQYDSAISAFQTFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKMYPKS 209 Query: 261 YWARYV 266 + Sbjct: 210 PKSADA 215 >gi|212703030|ref|ZP_03311158.1| hypothetical protein DESPIG_01068 [Desulfovibrio piger ATCC 29098] gi|212673618|gb|EEB34101.1| hypothetical protein DESPIG_01068 [Desulfovibrio piger ATCC 29098] Length = 341 Score = 62.4 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 38/146 (26%), Gaps = 8/146 (5%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 SS D+ V ++ Y+ + + + P A Sbjct: 199 APGADSSSDGATADTSVPVTDEKAAYQAGLDLILSGRLDEGMARMQALLDQHPSGAYAAN 258 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + S G+ ++A +YP+ GM + Q Sbjct: 259 AEYWLGEALSSQGRNEEALKHFRNVEARYPKHHKNADALLRTGM--------ILRQQGDA 310 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFY 181 + ++V+R+ S R Sbjct: 311 AGAGKAFRQVVQRFPASAAAAIIRKK 336 >gi|296272366|ref|YP_003654997.1| hypothetical protein Arnit_0826 [Arcobacter nitrofigilis DSM 7299] gi|296096540|gb|ADG92490.1| conserved hypothetical protein [Arcobacter nitrofigilis DSM 7299] Length = 222 Score = 62.4 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 68/193 (35%), Gaps = 13/193 (6%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 +L A+ ++ ++ ++ Y K + + A + Sbjct: 10 KSLSLVFIAGFAMTLTSCSSKKGPKEYGQPAIYW-------YNKIANDIATSDLEGADDA 62 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 + + + + +L + A +Y+ A +EY ++ SK++DY YL Sbjct: 63 YISLESEHKNSPLLATALQILVNAHIDAEEYELANFYIDEYTKRFGVSKSIDYFRYLKIK 122 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY---VKGARFYVTVGRNQLAAKEVEI 196 + +Q + ++ + ++ NSPY V + + + A+ + EI Sbjct: 123 ANFLSFSSEFREQNLITQTQKEINEFMVKFPNSPYMPLVGTINARLAMAK---ASFDKEI 179 Query: 197 GRYYLKRGEYVAA 209 Y + + AA Sbjct: 180 ADLYKRVDKPKAA 192 >gi|283833961|ref|ZP_06353702.1| putative periplasmic protein [Citrobacter youngae ATCC 29220] gi|291070092|gb|EFE08201.1| putative periplasmic protein [Citrobacter youngae ATCC 29220] Length = 262 Score = 62.4 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 47/134 (35%), Gaps = 9/134 (6%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + Y A+ +++++ A E F + +P + + + Y+ G Sbjct: 134 APAQTGDANTDYNAAIALVQDKSRQDDAIEAFQNFIKKYPDSTYLPNANYWLGQLNYNKG 193 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 K AA + YP+S Y VG+ + D+ T +++ + Sbjct: 194 KKDDAAFYFASVVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQQVITK 245 Query: 169 YTNSPYVKGARFYV 182 Y + K A+ + Sbjct: 246 YPGTDGAKQAQKRL 259 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 46/131 (35%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ ++ +++Y +S Y+ A +++ Sbjct: 141 ANTDYNAAIALVQDKSRQDDAIEAFQNFIKKYPDSTYLPNANYWLGQLN----------- 189 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 Y K + AA F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 190 --YNKGKKDDAAFY-FASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVITKY 246 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 247 PGTDGAKQAQK 257 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I +YP+S + Y +G + Y + +V+ Y Sbjct: 159 DDAIEAFQNFIKKYPDSTYLPNANYWLGQLNYNKGKKDD--------AAFYFASVVKNYP 210 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A + V V +G+ A +Q V+ Y + A++A Sbjct: 211 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVITKYPGTDGAKQAQ 256 Query: 231 ARL 233 RL Sbjct: 257 KRL 259 >gi|254880860|ref|ZP_05253570.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA] gi|254833653|gb|EET13962.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA] Length = 967 Score = 62.4 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 46/222 (20%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D +YE+ F++ ++ + A FN + FP + VAR++ + Y Sbjct: 574 DYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLYYQDD 633 Query: 109 KYQQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPY 150 KY +A ++ I YP S+ +Y + + Sbjct: 634 KYPEAIQAYKQVIAGYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTIPGGANFDVNER 693 Query: 151 D------------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D + +R ++ + + A +Y+ + Sbjct: 694 DSLTYVAAERVYMRGEVAEARNSFTRYLQTFPEGAFSLNANYYIGLID------------ 741 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVA 239 + Y +A VL Y + +++E+AM E AY A Sbjct: 742 --YNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTA 780 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 73/214 (34%), Gaps = 26/214 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117 +Y + K++N+ A +F + ++ + +++QA Sbjct: 474 LYNLGYTYFKQKNYGNAGTWFTRFVDRGSINERTMQADAYNRIGDCNFYDRRFEQARQDY 533 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P DY Y +R + D +Q ++R++ Y S Y+ Sbjct: 534 ARAVEIDPS--LGDYSLYQEA-----FVRGLQRD---YNGKVQTLNRLISDYPESQYMDD 583 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A E GR +++ + AI RF +++ + ++ A A + Y Sbjct: 584 AL--------------YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLY 629 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 EA + + YP AR + +K Sbjct: 630 YQDDKYPEAIQAYKQVIAGYPGSEEARLAQRDLK 663 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 75/248 (30%), Gaps = 52/248 (20%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + L + + C L G +Q + R RE K + E Sbjct: 1 MKRKTLLMAALMGGCSLQGMAQQITPKDVAGDKEYNRVCREYELKGGDSM---------E 51 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +P + + L + A + GKY++A +L Sbjct: 52 LLQAYLDKYPDSRHKNRVLSLIASAYFMEGKYKEAIALFRS------------------- 92 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL------AAK 192 + + D D A +L Y+ ++ A + T+ + A Sbjct: 93 -CDLEALPDKERDDCAMRLATSYLKE--------DNLREAAVWFTLLKEVSPLYQDDAVY 143 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM--ARLVEAYVALALMDEAREVV 250 + Y KR Y A+ FQ + + A+ + E Y+ +AR V Sbjct: 144 NLAYIDYVEKR--YDKALKSFQSLQND-----AVYAALVPYYIGEIYLVKGNYQQARTVA 196 Query: 251 SLIQERYP 258 E+YP Sbjct: 197 KAYLEQYP 204 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y ++ ++ + A + ++ +P + ++LM A + Y+A Y++A + ++ Sbjct: 735 YYIGLIDYNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQ 792 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 76/233 (32%), Gaps = 31/233 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A ++A F + + FP + + + Y+ Y+ AA ++ Sbjct: 698 YVAAERVYMRGEVAEARNSFTRYLQTFPEGAFSLNANYYIGLIDYNQKAYESAARHLDKV 757 Query: 121 ITQYPESKNVDYVY------------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + YP +K + Y + + ++D +L M R Sbjct: 758 LE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQLKDKAASMERRRLAKTGMLRSAHM 816 Query: 169 YTNSPYVKGARFYVTVGRNQLAAK----EVEIGRYYLKRGEYVAAIPRFQLVLANY---- 220 N + + + LA E+ +Y + Y+ A + + Sbjct: 817 LGNEEEI------IFAATDLLADTKLAPELSNEAHYYRAKAYLDAGK-TDGAMEDLKVLA 869 Query: 221 SDAEHAE--EAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270 D + EA ++ + Y D+A +EV++ I+ P YW L+ Sbjct: 870 KDTRNVYGAEAKYKVAQIYFDGGQTDKAEQEVLNYIEVSTPHTYWLARSFVLL 922 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 24/153 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +YE + + +SKA + + +++ + L + + +A E+ Sbjct: 248 LYELGMSYYYTGVYSKAAATLGEMASVH--DALSQNAYLHMGLAYLNLKERNRARMAFEQ 305 Query: 120 YITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + V + Y + + + R + + NSPY + Sbjct: 306 -AANFSFDPKVKEQALYNYALCIHETSYS------PFAESVTVFERFLNEFPNSPYTERV 358 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Y+ Y+ Y AA+ Sbjct: 359 NDYLIEV--------------YMNTRSYEAALK 377 >gi|150003900|ref|YP_001298644.1| hypothetical protein BVU_1333 [Bacteroides vulgatus ATCC 8482] gi|149932324|gb|ABR39022.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] Length = 967 Score = 62.4 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 46/222 (20%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D +YE+ F++ ++ + A FN + FP + VAR++ + Y Sbjct: 574 DYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLYYQDD 633 Query: 109 KYQQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPY 150 KY +A ++ I YP S+ +Y + + Sbjct: 634 KYPEAIQAYKQVIAGYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTIPGGANFDVNER 693 Query: 151 D------------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D + +R ++ + + A +Y+ + Sbjct: 694 DSLTYVAAERVYMRGEVAEARNSFTRYLQTFPEGAFSLNANYYIGLID------------ 741 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVA 239 + Y +A VL Y + +++E+AM E AY A Sbjct: 742 --YNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTA 780 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 73/214 (34%), Gaps = 26/214 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117 +Y + K++N+ A +F + ++ + +++QA Sbjct: 474 LYNLGYTYFKQKNYGNAGTWFTRFVDRGSINERTMQADAYNRIGDCNFYDRRFEQARQDY 533 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P DY Y +R + D +Q ++R++ Y S Y+ Sbjct: 534 ARAVEIDPS--LGDYSLYQEA-----FVRGLQRD---YNGKVQTLNRLISDYPESQYMDD 583 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A E GR +++ + AI RF +++ + ++ A A + Y Sbjct: 584 AL--------------YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLY 629 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 EA + + YP AR + +K Sbjct: 630 YQDDKYPEAIQAYKQVIAGYPGSEEARLAQRDLK 663 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 75/248 (30%), Gaps = 52/248 (20%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + L + + C L G +Q + R RE K + E Sbjct: 1 MKRKTLLMAALMGGCSLQGMAQQITPKDVAGDKEYNRVCREYELKGGDSM---------E 51 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 +P + + L + A + GKY++A +L Sbjct: 52 LLQAYLDKYPDSRHKNRVLSLIASAYFMEGKYKEAIALFRS------------------- 92 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL------AAK 192 + + D D A +L Y+ ++ A + T+ + A Sbjct: 93 -CDLEALPDKERDDCAMRLATSYLKE--------DNLREAAVWFTLLKEVSPLYQDDAVY 143 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM--ARLVEAYVALALMDEAREVV 250 + Y KR Y A+ FQ + + A+ + E Y+ +AR V Sbjct: 144 NLAYIDYVEKR--YDKALKSFQSLQND-----AVYAALVPYYIGEIYLVKGNYQQARTVA 196 Query: 251 SLIQERYP 258 E+YP Sbjct: 197 KAYLEQYP 204 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y ++ ++ + A + ++ +P + ++LM A + Y+A Y++A + ++ Sbjct: 735 YYIGLIDYNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQ 792 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 76/233 (32%), Gaps = 31/233 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A ++A F + + FP + + + Y+ Y+ AA ++ Sbjct: 698 YVAAERVYMRGEVAEARNSFTRYLQTFPEGAFSLNANYYIGLIDYNQKAYESAARHLDKV 757 Query: 121 ITQYPESKNVDYVY------------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + YP +K + Y + + ++D +L M R Sbjct: 758 LE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQLKDKAASMERRRLAKTGMLRSAHM 816 Query: 169 YTNSPYVKGARFYVTVGRNQLAAK----EVEIGRYYLKRGEYVAAIPRFQLVLANY---- 220 N + + + LA E+ +Y + Y+ A + + Sbjct: 817 LGNEEEI------IFAATDLLADTKLAPELSNEAHYYRAKAYLDAGK-TDGAMEDLKVLA 869 Query: 221 SDAEHAE--EAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270 D + EA ++ + Y D+A +EV++ I+ P YW L+ Sbjct: 870 KDTRNVYGAEAKYKVAQIYFDGGQTDKAEQEVLNYIEVSTPHTYWLARSFVLL 922 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 24/153 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +YE + + +SKA + + +++ + L + + +A E+ Sbjct: 248 LYELGMSYYYTGVYSKAAATLGEMASVH--DALSQNAYLHMGLAYLNLKERNRARMAFEQ 305 Query: 120 YITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + V + Y + + + R + + NSPY + Sbjct: 306 -AANFSFDPKVKEQALYNYALCIHETSYS------PFAESVTVFERFLNEFPNSPYTERV 358 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Y+ Y+ Y AA+ Sbjct: 359 NDYLIEV--------------YMNTRSYEAALK 377 >gi|190575560|ref|YP_001973405.1| putative TPR repeat exported protein [Stenotrophomonas maltophilia K279a] gi|190013482|emb|CAQ47117.1| putative TPR repeat exported protein [Stenotrophomonas maltophilia K279a] Length = 272 Score = 62.4 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S+ +R Y A LK + + + F + +P A +L Y+ Sbjct: 138 SLAATGDERTSYNVAFDSLKAGKYDDSAQLFLSFLQLYPNGVYAPNALYWLGESYYATRN 197 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + E + +YP VG+S + Q + +V +Y Sbjct: 198 FPMAETQFRELLARYPTHDKAAGGLLKVGLSQY--------GEGKVDQAQQTLESVVAQY 249 Query: 170 TNSPYVKGARFYVTVGR 186 S + A+ + R Sbjct: 250 PGSDAARTAQDRLQSIR 266 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q ++ Y N Y A +++ G Y + A +F+ + Sbjct: 163 DSAQLFLSFLQLYPNGVYAPNALYWL--------------GESYYATRNFPMAETQFREL 208 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 LA Y + A + ++ + +D+A++ + + +YP AR + ++ Sbjct: 209 LARYPTHDKAAGGLLKVGLSQYGEGKVDQAQQTLESVVAQYPGSDAARTAQDRLQ 263 Score = 42.0 bits (98), Expect = 0.080, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 41/128 (32%), Gaps = 22/128 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 AGKY +A L ++ YP Y +G SY + Sbjct: 157 KAGKYDDSAQLFLSFLQLYPNGVYAPNALYWLGESYYATRNFPM--------AETQFREL 208 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 + RY ++ A +++G G+ A + V+A Y ++ Sbjct: 209 LARYPT--------------HDKAAGGLLKVGLSQYGEGKVDQAQQTLESVVAQYPGSDA 254 Query: 226 AEEAMARL 233 A A RL Sbjct: 255 ARTAQDRL 262 Score = 35.1 bits (80), Expect = 9.4, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 24/58 (41%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 LK G+Y + F L Y + +A A+ L E+Y A A + RYP Sbjct: 156 LKAGKYDDSAQLFLSFLQLYPNGVYAPNALYWLGESYYATRNFPMAETQFRELLARYP 213 >gi|255689982|ref|ZP_05413657.1| TPR-domain containing protein [Bacteroides finegoldii DSM 17565] gi|260624589|gb|EEX47460.1| TPR-domain containing protein [Bacteroides finegoldii DSM 17565] Length = 1005 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 77/206 (37%), Gaps = 31/206 (15%) Query: 44 RDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSR-DFPFAGVA--RKSLLM 99 + + L+ + + Y + +L +NF +A Y++Q + + P + + +L+ Sbjct: 534 KYIRLEKGENTTALADAYNRVGDCYLHVRNFEEAKHYYSQAEQMNTPSGDYSFYQLALVS 593 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y +L + +YP S Y G SY M + + Sbjct: 594 G-----LQKDYSGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNN--------NQAI 640 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 ++ +Y SP + A EIG Y ++ +Y AI ++ V+ Sbjct: 641 TSFKELMNKYPESPVSRKAAA--------------EIGLLYYQKDDYNQAIEAYKQVIEK 686 Query: 220 YSDAEHAEEAMARLVEAYVALALMDE 245 Y +E A AM L YV L +DE Sbjct: 687 YPGSEEARMAMRDLKSIYVDLNRIDE 712 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 33/236 (13%), Positives = 76/236 (32%), Gaps = 45/236 (19%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +YEK ++ N ++A F + +P + V+RK+ + Y Y Sbjct: 614 PASPYAVNAIYEKGRSYVLMDNNNQAITSFKELMNKYPESPVSRKAAAEIGLLYYQKDDY 673 Query: 111 QQAASLGEEYITQYPESKNVDYVY------YL--------VGMSYAQ----MIRDVPYD- 151 QA ++ I +YP S+ Y+ ++ A D Sbjct: 674 NQAIEAYKQVIEKYPGSEEARMAMRDLKSIYVDLNRIDEFAALANAMPGHIRFDANEQDS 733 Query: 152 -----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 + + ++ ++ + + A +++ + ++ ++ + Sbjct: 734 LTYTAAEKIYMRGRLEEAKTSFNKYLQTFPEGAFSLNAHYHLCLIGSEQKNYDMIL---- 789 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 L G+ L Y + AEEA+ E +A +++E+ Sbjct: 790 LHSGK-----------LLEYPNNPFAEEALILRAEVQFNQQQTADALTSYKMLKEK 834 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 75/225 (33%), Gaps = 28/225 (12%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYS 106 + Y Y + +++S+A YF + + +A + Sbjct: 502 QPNNETYALANYNLGYIAFHRKDYSQASHYFQKYIRLEKGENTTALA-DAYNRVGDCYLH 560 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 +++A + + + DY +Y + + + ++R+V Sbjct: 561 VRNFEEAKHYYSQAEQMN--TPSGDYSFYQLALVSGLQKDYSGK--------ITLLNRLV 610 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 +Y SPY A E GR Y+ AI F+ ++ Y ++ + Sbjct: 611 GKYPASPYAVNAI--------------YEKGRSYVLMDNNNQAITSFKELMNKYPESPVS 656 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 +A A + Y ++A E + E+YP AR +K Sbjct: 657 RKAAAEIGLLYYQKDDYNQAIEAYKQVIEKYPGSEEARMAMRDLK 701 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 36/264 (13%), Positives = 73/264 (27%), Gaps = 55/264 (20%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 +C + D T +Y++ +E+N++ A + P Sbjct: 9 ICAAICCTPIIGFAQTSDKFTST---DNLYKEGKELFQEKNYAAALPALKAFVKQKPATS 65 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-------- 143 + + + M A Y + + +Y+ +YP++ + +Y L+ Y Sbjct: 66 LLQDAEYMLASSAYELKDKNR-IEILRKYLDRYPDTPYANRIYALLASCYFYEGKYDEAL 124 Query: 144 ---------MIRDVPYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYV 182 ++ + D + + + Y K +Y+ Sbjct: 125 ALFNSADLGLLGNEERDDCTYQLATCYLKTNNLREAAIWFETLRANSP--KYAKDCDYYL 182 Query: 183 TVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + R I Y + Y A Q L+ Y + Sbjct: 183 SYIRYTQKRYNEALKGFLPLQDDSKYKALVPYYIAEIYAQLQNYDKAQIVAQNYLSAYPN 242 Query: 223 AEHAEEAMARLVEAYVALALMDEA 246 EH E L +AY +A Sbjct: 243 NEHTAEMYRILGDAYYHFGQYHQA 266 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 22/169 (13%), Positives = 50/169 (29%), Gaps = 22/169 (13%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S + YLD + +Y + + + + +SKA E + + + + + L Sbjct: 269 SFNEYLDKDHSAARRDALYMLGLSYYQTKVYSKAAETLGKVTTTN--DALTQNAYLHMGL 326 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + +A E+ + + Y + + A + Sbjct: 327 SYLQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFS------AFGESVTAF 380 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + + SPY + Y+ Y+ Y AA+ Sbjct: 381 EKFLNEFPTSPYAEKVSSYLVEV--------------YMNTRSYDAALK 415 >gi|288817423|ref|YP_003431770.1| hypothetical protein HTH_0102 [Hydrogenobacter thermophilus TK-6] gi|288786822|dbj|BAI68569.1| hypothetical protein HTH_0102 [Hydrogenobacter thermophilus TK-6] gi|308751030|gb|ADO44513.1| TPR repeat-containing protein [Hydrogenobacter thermophilus TK-6] Length = 846 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 13/132 (9%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + E+Y + + E ++ + +YF S + + + K+LL Y+ GK + A Sbjct: 487 KTDEELYLLGLSYFLEGDYESSAKYFKSISSN---SPLKPKALLKLGDALYNEGKVESAK 543 Query: 115 SLGEEYITQYPESKNVDYV-YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + E I++YP S+ Y L+GM + I DV M Q + + +Y NS Sbjct: 544 AYYYEIISKYPNSEQAKYATLSLIGMG-GKNIGDV--------QMQQLLEDYLRKYPNSA 594 Query: 174 YVKGARFYVTVG 185 + ++ + Sbjct: 595 VSEDLKYQLAQI 606 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 67/198 (33%), Gaps = 46/198 (23%) Query: 80 FNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + +P + + + G ++ A E+ P Y Sbjct: 400 LEEIRNRYPALYREYT-------GWFYFKKGDWENAVRYLED-----P---------YYK 438 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK----- 192 ++Y M K ++ + R + V A+ + +G +LA Sbjct: 439 ALAYFNM-----------KDYKGVLNILESRNSERDRVLKAKSALFLGDPKLARSFLTDK 487 Query: 193 ---EVEI-GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 E+ + G Y G+Y ++ F+ + +N + +A+ +L +A ++ A+ Sbjct: 488 TDEELYLLGLSYFLEGDYESSAKYFKSISSN---SPLKPKALLKLGDALYNEGKVESAKA 544 Query: 249 VVSLIQERYPQGYWARYV 266 I +YP A+Y Sbjct: 545 YYYEIISKYPNSEQAKYA 562 >gi|300777177|ref|ZP_07087035.1| TPR repeat-containing protein [Chryseobacterium gleum ATCC 35910] gi|300502687|gb|EFK33827.1| TPR repeat-containing protein [Chryseobacterium gleum ATCC 35910] Length = 987 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 73/206 (35%), Gaps = 29/206 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ + K + F +A YF Q + P + L A + Y+ +A ++ ++ Sbjct: 508 YDLGYAYFKSKKFDQAATYFKQYLAN-PKPEFKNDAELRLADIHYANNDLNEAIAIYDK- 565 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 DY Y M+ T+ + + ++ +Y +S Y A+ Sbjct: 566 -----NEDATDYTLYQKAMALGFK--------GDTQAKINNLKNLLSKYPDSEYYDDAQ- 611 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 EIG Y + ++ + F V+ SD + A + Y+ Sbjct: 612 -------------YEIGTAYAAQDDFANSNDYFGKVIKGSSDKDLIANASIYRAQNYIDQ 658 Query: 241 ALMDEAREVVSLIQERYPQGYWARYV 266 D+A + + E+Y +A+ V Sbjct: 659 NQNDKALSELKSLGEQYKNTAYAQKV 684 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 69/209 (33%), Gaps = 34/209 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + N+ +A +YF + ++L A V Y G Y A E+ Sbjct: 436 YLLGTEEFNKGNYDEAEKYFLRSLGFNINKEFNSRALYWLAQVYYQKGNYPSAIVRYEKL 495 Query: 121 IT-QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + +PE + + Y G +Y + + Y + + + A Sbjct: 496 LNENFPEKQQLPYDL---GYAYFKS--------KKFDQAATYFKQYLAN-PKPEFKNDAE 543 Query: 180 FYVTVGRNQLAAKEVE--IGRY-----------YLK------RGEYVAAIPRFQLVLANY 220 + A ++ I Y Y K +G+ A I + +L+ Y Sbjct: 544 LRLADI--HYANNDLNEAIAIYDKNEDATDYTLYQKAMALGFKGDTQAKINNLKNLLSKY 601 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREV 249 D+E+ ++A + AY A + + Sbjct: 602 PDSEYYDDAQYEIGTAYAAQDDFANSNDY 630 Score = 42.4 bits (99), Expect = 0.063, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 63/216 (29%), Gaps = 30/216 (13%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + +Y+KA+ + + +P + + + + Sbjct: 567 EDATDYTLYQKAMALGFKGDTQAKINNLKNLLSKYPDSEYYDDAQYEIGTAYAAQDDFAN 626 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + + I S + D L+ + ++ DQ L + + E+Y N+ Sbjct: 627 SNDYFGKVIK---GSSDKD----LIANASIYRAQNYI-DQNQNDKALSELKSLGEQYKNT 678 Query: 173 PYVKG---ARFYVTVGRNQLAAKE-------------------VEIGRYYLKRGEYVAAI 210 Y + A + ++ E + G+ + +Y AI Sbjct: 679 AYAQKVVQAAKPIFTKNGDVSGYETFARNIGVNVDAAEIDEINLSTGKQLFAKKDYKNAI 738 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 ++ L E +A L E+Y +A Sbjct: 739 SYYEKYLTQNPTGEGLYQAKYELGESYYQTNNSTKA 774 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 6/58 (10%), Positives = 17/58 (29%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++++ A Y+ + P ++ Y +A + +E Sbjct: 723 STGKQLFAKKDYKNAISYYEKYLTQNPTGEGLYQAKYELGESYYQTNNSTKALLVLQE 780 >gi|319639870|ref|ZP_07994599.1| hypothetical protein HMPREF9011_00196 [Bacteroides sp. 3_1_40A] gi|317388534|gb|EFV69384.1| hypothetical protein HMPREF9011_00196 [Bacteroides sp. 3_1_40A] Length = 960 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 46/222 (20%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D +YE+ F++ ++ + A FN + FP + VAR++ + Y Sbjct: 567 DYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLYYQDD 626 Query: 109 KYQQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPY 150 KY +A ++ I YP S+ +Y + + Sbjct: 627 KYPEAIQAYKQVIAGYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTIPGGANFDVNER 686 Query: 151 D------------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D + +R ++ + + A +Y+ + Sbjct: 687 DSLTYVAAERVYMRGEVAEARNSFTRYLQTFPEGAFSLNANYYIGLID------------ 734 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVA 239 + Y +A VL Y + +++E+AM E AY A Sbjct: 735 --YNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTA 773 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 73/214 (34%), Gaps = 26/214 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117 +Y + K++N+ A +F + ++ + +++QA Sbjct: 467 LYNLGYTYFKQKNYGNAGTWFTRFVDRGSINERTMQADAYNRIGDCNFYDRRFEQARQDY 526 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P DY Y +R + D +Q ++R++ Y S Y+ Sbjct: 527 ARAVEIDPS--LGDYSLYQEA-----FVRGLQRD---YNGKVQTLNRLISDYPESQYMDD 576 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A E GR +++ + AI RF +++ + ++ A A + Y Sbjct: 577 AL--------------YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLY 622 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 EA + + YP AR + +K Sbjct: 623 YQDDKYPEAIQAYKQVIAGYPGSEEARLAQRDLK 656 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y ++ ++ + A + ++ +P + ++LM A + Y+A Y++A + ++ Sbjct: 728 YYIGLIDYNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQ 785 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 76/233 (32%), Gaps = 31/233 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A ++A F + + FP + + + Y+ Y+ AA ++ Sbjct: 691 YVAAERVYMRGEVAEARNSFTRYLQTFPEGAFSLNANYYIGLIDYNQKAYESAARHLDKV 750 Query: 121 ITQYPESKNVDYVY------------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + YP +K + Y + + ++D +L M R Sbjct: 751 LE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQLKDKAASMERRRLAKTGMLRSAHM 809 Query: 169 YTNSPYVKGARFYVTVGRNQLAAK----EVEIGRYYLKRGEYVAAIPRFQLVLANY---- 220 N + + + LA E+ +Y + Y+ A + + Sbjct: 810 LGNEEEI------IFAATDLLADTKLAPELSNEAHYYRAKAYLDAGK-TDGAMEDLKVLA 862 Query: 221 SDAEHAE--EAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270 D + EA ++ + Y D+A +EV++ I+ P YW L+ Sbjct: 863 KDTRNVYGAEAKYKVAQIYFDGGQTDKAEQEVLNYIEVSTPHTYWLARSFVLL 915 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 24/153 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +YE + + +SKA + + +++ + L + + +A E+ Sbjct: 241 LYELGMSYYYTGVYSKAAATLGEMASVH--DALSQNAYLHMGLAYLNLKERNRARMAFEQ 298 Query: 120 YITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + V + Y + + + R + + NSPY + Sbjct: 299 -AANFSFDPKVKEQALYNYALCIHETSYS------PFAESVTVFERFLNEFPNSPYTERV 351 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Y+ Y+ Y AA+ Sbjct: 352 NDYLIEV--------------YMNTRSYEAALK 370 Score = 35.9 bits (82), Expect = 6.7, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 72/241 (29%), Gaps = 52/241 (21%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + + C L G +Q + R RE K + E Sbjct: 1 MAALMGGCSLQGMAQQITPKDVAGDKEYNRVCREYELKGGDSM---------ELLQAYLD 51 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +P + + L + A + GKY++A +L + + Sbjct: 52 KYPDSRHKNRVLSLIASAYFMEGKYKEAIALFRS--------------------CDLEAL 91 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL------AAKEVEIGRY 199 D D A +L Y+ ++ A + T+ + A + Y Sbjct: 92 PDKERDDCAMRLATSYLKE--------DNLREAAVWFTLLKEVSPLYQDDAVYNLAYIDY 143 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAM--ARLVEAYVALALMDEAREVVSLIQERY 257 KR Y A+ FQ + + A+ + E Y+ +AR V E+Y Sbjct: 144 VEKR--YDKALKSFQSLQND-----AVYAALVPYYIGEIYLVKGNYQQARTVAKAYLEQY 196 Query: 258 P 258 P Sbjct: 197 P 197 >gi|294775054|ref|ZP_06740583.1| putative tol-pal system protein YbgF [Bacteroides vulgatus PC510] gi|294451098|gb|EFG19569.1| putative tol-pal system protein YbgF [Bacteroides vulgatus PC510] Length = 960 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 46/222 (20%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D +YE+ F++ ++ + A FN + FP + VAR++ + Y Sbjct: 567 DYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLYYQDD 626 Query: 109 KYQQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPY 150 KY +A ++ I YP S+ +Y + + Sbjct: 627 KYPEAIQAYKQVIAGYPGSEEARLAQRDLKSIYIDLNKVDEYANFASTIPGGANFDVNER 686 Query: 151 D------------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D + +R ++ + + A +Y+ + Sbjct: 687 DSLTYVAAERVYMRGEVAEARNSFTRYLQTFPEGAFSLNANYYIGLID------------ 734 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVA 239 + Y +A VL Y + +++E+AM E AY A Sbjct: 735 --YNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTA 773 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 73/214 (34%), Gaps = 26/214 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117 +Y + K++N+ A +F + ++ + +++QA Sbjct: 467 LYNLGYTYFKQKNYGNAGTWFTRFVDRGSINERTMQADAYNRIGDCNFYDRRFEQARQDY 526 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P DY Y +R + D +Q ++R++ Y S Y+ Sbjct: 527 ARAVEIDPS--LGDYSLYQEA-----FVRGLQRD---YNGKVQTLNRLISDYPESQYMDD 576 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A E GR +++ + AI RF +++ + ++ A A + Y Sbjct: 577 AL--------------YEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLY 622 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 EA + + YP AR + +K Sbjct: 623 YQDDKYPEAIQAYKQVIAGYPGSEEARLAQRDLK 656 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y ++ ++ + A + ++ +P + ++LM A + Y+A Y++A + ++ Sbjct: 728 YYIGLIDYNQKAYESAARHLDKVLE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQ 785 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 76/233 (32%), Gaps = 31/233 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A ++A F + + FP + + + Y+ Y+ AA ++ Sbjct: 691 YVAAERVYMRGEVAEARNSFTRYLQTFPEGAFSLNANYYIGLIDYNQKAYESAARHLDKV 750 Query: 121 ITQYPESKNVDYVY------------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + YP +K + Y + + ++D +L M R Sbjct: 751 LE-YPNNKYSEDAMLMGAEMAYTAKDYEKALHIYKQLKDKAASMERRRLAKTGMLRSAHM 809 Query: 169 YTNSPYVKGARFYVTVGRNQLAAK----EVEIGRYYLKRGEYVAAIPRFQLVLANY---- 220 N + + + LA E+ +Y + Y+ A + + Sbjct: 810 LGNEEEI------IFAATDLLADTKLAPELSNEAHYYRAKAYLDAGK-TDGAMEDLKVLA 862 Query: 221 SDAEHAE--EAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270 D + EA ++ + Y D+A +EV++ I+ P YW L+ Sbjct: 863 KDTRNVYGAEAKYKVAQIYFDGGQTDKAEQEVLNYIEVSTPHTYWLARSFVLL 915 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 24/153 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +YE + + +SKA + + +++ + L + + +A E+ Sbjct: 241 LYELGMSYYYTGVYSKAAATLGEMASVH--DALSQNAYLHMGLAYLNLKERNRARMAFEQ 298 Query: 120 YITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + V + Y + + + R + + NSPY + Sbjct: 299 -AANFSFDPKVKEQALYNYALCIHETSYS------PFAESVTVFERFLNEFPNSPYTERV 351 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Y+ Y+ Y AA+ Sbjct: 352 NDYLIEV--------------YMNTRSYEAALK 370 >gi|220935395|ref|YP_002514294.1| hypothetical protein Tgr7_2227 [Thioalkalivibrio sp. HL-EbGR7] gi|219996705|gb|ACL73307.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7] Length = 265 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 53/135 (39%), Gaps = 8/135 (5%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + +++ Y A L+E + ++ F + +P +G+A + +Y + + Sbjct: 136 NSAEEQQSYRAAFDLLREGRYEQSVSAFRRFLEAYPESGLASNAQYWLGEAKYVSRDFPS 195 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A + E+ + QYP+S V +G ++ ++ + + ++ + S Sbjct: 196 ALTEFEKVLRQYPDSNKVADAQLKLGFTHYEL--------GQWDKARETLEQVRRDHAGS 247 Query: 173 PYVKGARFYVTVGRN 187 + A + R+ Sbjct: 248 AVARLAEQRLQRMRD 262 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 47/116 (40%), Gaps = 14/116 (12%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + + R +E Y S A++++ + Y+ R + +A+ F+ Sbjct: 157 EQSVSAFRRFLEAYPESGLASNAQYWLGEAK-------------YVSRD-FPSALTEFEK 202 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 VL Y D+ +A +L + L D+ARE + ++ + AR E ++ Sbjct: 203 VLRQYPDSNKVADAQLKLGFTHYELGQWDKARETLEQVRRDHAGSAVARLAEQRLQ 258 >gi|227114919|ref|ZP_03828575.1| hypothetical protein PcarbP_18240 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 258 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 46/135 (34%), Gaps = 9/135 (6%) Query: 50 SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + Y AV L+++ + +A F + +P + + + Y+ G Sbjct: 130 APASTGDANTDYNAAVALVLEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKG 189 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 K AA + YP+S VG+ + ++ ++V+ Sbjct: 190 KKDDAAYYFANVVKNYPKSPKSSEALLKVGV--------IMQEKGQADKAKAVYQQVVKM 241 Query: 169 YTNSPYVKGARFYVT 183 Y N+ K A+ + Sbjct: 242 YPNTESAKQAQKRLA 256 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 40/112 (35%), Gaps = 14/112 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + V++Y +S Y A +++ +G+ A F V Sbjct: 156 QAISAFQAFVKKYPDSTYQPNANYWLGQLN--------------YNKGKKDDAAYYFANV 201 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + NY + + EA+ ++ D+A+ V + + YP A+ + Sbjct: 202 VKNYPKSPKSSEALLKVGVIMQEKGQADKAKAVYQQVVKMYPNTESAKQAQK 253 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 22/127 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y QA S + ++ +YP+S Y +G + Y + +V+ Sbjct: 152 KQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFANVVK 203 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SP A V V ++G+ A +Q V+ Y + E A+ Sbjct: 204 NYPKSPKSSEALLKVGVIMQ--------------EKGQADKAKAVYQQVVKMYPNTESAK 249 Query: 228 EAMARLV 234 +A RL Sbjct: 250 QAQKRLA 256 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ +Y AI FQ + Y D+ + A L + D+A + + + YP+ Sbjct: 149 LEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFANVVKNYPKS 208 Query: 261 YWARYVETLVK 271 + E L+K Sbjct: 209 --PKSSEALLK 217 >gi|317476438|ref|ZP_07935687.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA] gi|316907464|gb|EFV29169.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA] Length = 1010 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 79/229 (34%), Gaps = 45/229 (19%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +YEK +++ +N S+A F + +P + V+RK+ + Y Y +A Sbjct: 629 NALYEKGRSYVQSRNNSQAIATFRELLNKYPESPVSRKAAAEIGLLYYQNDDYDRAIEAY 688 Query: 118 EEYITQYPESKNVDYVY------Y---------------LVGMSYAQMIRDVPYDQRATK 156 + IT+YP S+ Y + G + A + Sbjct: 689 KHVITKYPGSEEARLAMRDLKSIYVEANRVDEFAALAAQMPGAIRFEPSEQDSLTYIAAE 748 Query: 157 L---------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 +R ++ Y N + A +Y+++ KE + + V Sbjct: 749 KVYMKGELTPAKASFTRYLQSYPNGAFSLNAHYYLSII-----GKE---------QKDEV 794 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 A + +L Y D+ ++EEA+ E ++A +Q R Sbjct: 795 AVLEHAGKLLE-YPDSPYSEEALLMRGEILFNHKEYEQAMADYKQLQAR 842 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 75/218 (34%), Gaps = 26/218 (11%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQA 113 Y Y A + +++++ A + F + + + A ++ +A Sbjct: 516 YALAYYNLAYIAFHKKDYATAQDRFQKFIQLQKSGDATVLADAYNRIGDCHMQARRFDEA 575 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + DY YY + + V Q+ + ++++ +Y NSP Sbjct: 576 KQYYTRAENL--GTPAGDYSYYQLAL--------VAGLQKNYDGKVALLNQLANKYPNSP 625 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y N L K GR Y++ AI F+ +L Y ++ + +A A + Sbjct: 626 YA----------INALYEK----GRSYVQSRNNSQAIATFRELLNKYPESPVSRKAAAEI 671 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Y D A E + +YP AR +K Sbjct: 672 GLLYYQNDDYDRAIEAYKHVITKYPGSEEARLAMRDLK 709 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 68/211 (32%), Gaps = 41/211 (19%) Query: 44 RDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDF-PFAGVARKSLLMSA 101 + + L D + Y + ++ + F +A +Y+ + P Sbjct: 542 KFIQLQKSGDATVLADAYNRIGDCHMQARRFDEAKQYYTRAENLGTPAGD---------- 591 Query: 102 FVQYS-------AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 + Y Y +L + +YP S Y G SY Q R Sbjct: 592 YSYYQLALVAGLQKNYDGKVALLNQLANKYPNSPYAINALYEKGRSYVQS--------RN 643 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 + ++ +Y SP + A EIG Y + +Y AI ++ Sbjct: 644 NSQAIATFRELLNKYPESPVSRKAAA--------------EIGLLYYQNDDYDRAIEAYK 689 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDE 245 V+ Y +E A AM L YV +DE Sbjct: 690 HVITKYPGSEEARLAMRDLKSIYVEANRVDE 720 Score = 42.0 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 72/254 (28%), Gaps = 59/254 (23%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD-------FPFAGVARKSLLMSAFVQ 104 R +YE+ +++ F+ A + P AG ++ M + Sbjct: 26 EKTTSPRRLYEEGQNLFRQKAFAAAMSPLQAFIKQTGAEGNPLPTAGEKEEAEYMLVCAE 85 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA-----------------QMIRD 147 Y + L EY+ YP++ + + +Y L+ +Y ++ + Sbjct: 86 YELR-SPNSIELLREYLDTYPDTPHANRIYALIASAYFFEGKYDDALAMFNSARLDLLGN 144 Query: 148 VPYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-- 193 D K + + R T+S Y +Y++ R + Sbjct: 145 EERDDMTYRLATCYLKTGNVKEAAIWFETL--RSTSSKYAADCTYYLSYIRYSQQRYDDA 202 Query: 194 ------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 I YL + Y A Q L+ Y ++ E Sbjct: 203 LSGFLSLQDNAKYKVLVPYYIAEIYLIKKNYDKAEIVAQNYLSAYPGQKYTGEMYRIQGT 262 Query: 236 AYVALALMDEAREV 249 A EA + Sbjct: 263 ADYHFGKYHEAVKA 276 Score = 35.5 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 57/226 (25%), Gaps = 67/226 (29%) Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 E + +P A + + A + GKY A ++ ++ D + Y Sbjct: 94 IELLREYLDTYPDTPHANRIYALIASAYFFEGKYDDALAMFNSARLDLLGNEERDDMTYR 153 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--- 193 + Y + K + + R T+S Y +Y++ R + Sbjct: 154 LATCYLKT--------GNVKEAAIWFETL--RSTSSKYAADCTYYLSYIRYSQQRYDDAL 203 Query: 194 -----------------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA---------- 226 I YL + Y A Q L+ Y ++ Sbjct: 204 SGFLSLQDNAKYKVLVPYYIAEIYLIKKNYDKAEIVAQNYLSAYPGQKYTGEMYRIQGTA 263 Query: 227 ---------------------------EEAMARLVEAYVALALMDE 245 +A+ L +Y + + Sbjct: 264 DYHFGKYHEAVKAFGHYLKDNAEPAARRDALYMLGMSYYRTGVYSQ 309 >gi|62179324|ref|YP_215741.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224582569|ref|YP_002636367.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62126957|gb|AAX64660.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224467096|gb|ACN44926.1| hypothetical protein SPC_0751 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322713795|gb|EFZ05366.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 262 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 48/156 (30%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F + +P Sbjct: 115 SGAATTATPAPDAGTATSGAPVQSGDANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPD 174 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S Y VG+ + Sbjct: 175 STYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGV--------IM 226 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 227 QDKGDTAKAKAVYQQVINKYPGTDGAKQAQKRLNAM 262 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + +++Y +S Y A +++ G Sbjct: 141 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWL--------------G 186 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 187 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKY 246 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 247 PGTDGAKQAQK 257 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I +YP+S Y +G + Y + +V+ Y Sbjct: 159 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 210 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A + V V +G+ A +Q V+ Y + A++A Sbjct: 211 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 256 Query: 231 ARL 233 RL Sbjct: 257 KRL 259 >gi|16764120|ref|NP_459735.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161615016|ref|YP_001588981.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167995343|ref|ZP_02576433.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168240608|ref|ZP_02665540.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264360|ref|ZP_02686333.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467687|ref|ZP_02701524.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194442204|ref|YP_002039991.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449345|ref|YP_002044784.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197261877|ref|ZP_03161951.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|16419260|gb|AAL19694.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161364380|gb|ABX68148.1| hypothetical protein SPAB_02776 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194400867|gb|ACF61089.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407649|gb|ACF67868.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|195629168|gb|EDX48536.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197240132|gb|EDY22752.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205326988|gb|EDZ13752.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205339982|gb|EDZ26746.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205347197|gb|EDZ33828.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261246013|emb|CBG23815.1| putative exported protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992491|gb|ACY87376.1| hypothetical protein STM14_0872 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157341|emb|CBW16830.1| putative exported protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911777|dbj|BAJ35751.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226329|gb|EFX51380.1| TPR repeat containing exported protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323129062|gb|ADX16492.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332987687|gb|AEF06670.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 262 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 48/156 (30%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F + +P Sbjct: 115 SGAATTATPAPDAGTATSGAPVQSGDANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPD 174 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S Y VG+ + Sbjct: 175 STYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGV--------IM 226 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 227 QDKGDTAKAKAVYQQVINKYPGTDGAKQAQKRLNAM 262 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + +++Y +S Y A +++ G Sbjct: 141 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWL--------------G 186 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 187 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKY 246 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 247 PGTDGAKQAQK 257 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I +YP+S Y +G + Y + +V+ Y Sbjct: 159 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 210 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A + V V +G+ A +Q V+ Y + A++A Sbjct: 211 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 256 Query: 231 ARL 233 RL Sbjct: 257 KRL 259 >gi|303256188|ref|ZP_07342204.1| putative tol-pal system protein YbgF [Burkholderiales bacterium 1_1_47] gi|331001244|ref|ZP_08324870.1| tol-pal system protein YbgF [Parasutterella excrementihominis YIT 11859] gi|302860917|gb|EFL83992.1| putative tol-pal system protein YbgF [Burkholderiales bacterium 1_1_47] gi|329568971|gb|EGG50767.1| tol-pal system protein YbgF [Parasutterella excrementihominis YIT 11859] Length = 230 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 53/130 (40%), Gaps = 9/130 (6%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 ++ ++E+ ++ + ++ + ++A + F+ ++ + V +L Y G + Q Sbjct: 110 EISAKQEL-DRCLSVFQKGDANQAIKCFSGMTQKYSKTKVYPDALYWLGSSYYMKGNFAQ 168 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + + I+ Y + V Y LVGM+ D + T ++++ Y S Sbjct: 169 TIATEQRLISGYSKHAKVPEAYLLVGMAQM--------DSKKTAEAKATFDKLIKLYPKS 220 Query: 173 PYVKGARFYV 182 A+ + Sbjct: 221 SAAGLAKKQM 230 >gi|218131427|ref|ZP_03460231.1| hypothetical protein BACEGG_03045 [Bacteroides eggerthii DSM 20697] gi|217986359|gb|EEC52696.1| hypothetical protein BACEGG_03045 [Bacteroides eggerthii DSM 20697] Length = 1010 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 79/229 (34%), Gaps = 45/229 (19%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +YEK +++ +N S+A F + +P + V+RK+ + Y Y +A Sbjct: 629 NALYEKGRSYVQSRNNSQAIATFRELLNKYPESPVSRKAAAEIGLLYYQNDDYDRAIEAY 688 Query: 118 EEYITQYPESKNVDYVY------Y---------------LVGMSYAQMIRDVPYDQRATK 156 + IT+YP S+ Y + G + A + Sbjct: 689 KHVITKYPGSEEARLAMRDLKSIYVEANRVDEFAALAAQMPGAIRFEPSEQDSLTYIAAE 748 Query: 157 L---------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 +R ++ Y N + A +Y+++ KE + + V Sbjct: 749 KVYMKGELTPAKASFTRYLQSYPNGAFSLNAHYYLSII-----GKE---------QKDEV 794 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 A + +L Y D+ ++EEA+ E ++A +Q R Sbjct: 795 AVLEHAGKLLE-YPDSPYSEEALLMRGEILFNHKEYEQAMADYKQLQAR 842 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 68/211 (32%), Gaps = 41/211 (19%) Query: 44 RDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDF-PFAGVARKSLLMSA 101 + + L D + Y + ++ + F +A +Y+ + P Sbjct: 542 KFIQLQKSGDATVLADAYNRIGDCHMQARRFDEAKQYYTRAENLGTPAGD---------- 591 Query: 102 FVQYS-------AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 + Y Y +L + +YP S Y G SY Q R Sbjct: 592 YSYYQLALVAGLQKNYDGKVALLNQLANKYPNSPYAINALYEKGRSYVQS--------RN 643 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 + ++ +Y SP + A EIG Y + +Y AI ++ Sbjct: 644 NSQAIATFRELLNKYPESPVSRKAAA--------------EIGLLYYQNDDYDRAIEAYK 689 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDE 245 V+ Y +E A AM L YV +DE Sbjct: 690 HVITKYPGSEEARLAMRDLKSIYVEANRVDE 720 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 75/218 (34%), Gaps = 26/218 (11%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQA 113 Y Y A + +++++ A + F + + + A ++ +A Sbjct: 516 YALAYYNLAYITFHKKDYATAQDRFQKFIQLQKSGDATVLADAYNRIGDCHMQARRFDEA 575 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + DY YY + + V Q+ + ++++ +Y NSP Sbjct: 576 KQYYTRAENL--GTPAGDYSYYQLAL--------VAGLQKNYDGKVALLNQLANKYPNSP 625 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y N L K GR Y++ AI F+ +L Y ++ + +A A + Sbjct: 626 YA----------INALYEK----GRSYVQSRNNSQAIATFRELLNKYPESPVSRKAAAEI 671 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Y D A E + +YP AR +K Sbjct: 672 GLLYYQNDDYDRAIEAYKHVITKYPGSEEARLAMRDLK 709 Score = 42.8 bits (100), Expect = 0.056, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 72/254 (28%), Gaps = 59/254 (23%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD-------FPFAGVARKSLLMSAFVQ 104 + +YE+ +++ F+ A + P AG ++ M + Sbjct: 26 EKTTSPQRLYEEGQNLFRQKAFAAAMSPLQAFIKQTGAEGNPLPTAGEKEEAEYMLVCAE 85 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA-----------------QMIRD 147 Y + L EY+ YP++ + + +Y L+ +Y ++ + Sbjct: 86 YELR-SPNSIELLREYLDTYPDTPHANRIYALIASAYFFEGKYDDALAMFNSARLDLLGN 144 Query: 148 VPYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-- 193 D K + + R T+S Y +Y++ R + Sbjct: 145 EERDDMTYRLATCYLKTGNVKEAAIWFETL--RSTSSKYAADCTYYLSYIRYSQQRYDDA 202 Query: 194 ------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 I YL + Y A Q L+ Y ++ E Sbjct: 203 LSGFLSLQDNAKYKALVPYYIAEIYLIKKNYDKAEIVAQNYLSAYPGQKYTGEMYRIQGT 262 Query: 236 AYVALALMDEAREV 249 A EA + Sbjct: 263 ADYHFGKYHEAVKA 276 Score = 35.1 bits (80), Expect = 9.4, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 58/185 (31%), Gaps = 27/185 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A +LK N +A +F + A ++++YS +Y A S + Sbjct: 152 YRLATCYLKTGNVKEAAIWFETLRST--SSKYAADCTYYLSYIRYSQQRYDDALSG---F 206 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 ++ +K V Y + Y ++ + Y Y + Sbjct: 207 LSLQDNAKYKALVPYYIAEIY--------LIKKNYDKAEIVAQNYLSAYPGQKYTGEM-Y 257 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + Y+ G+Y A+ F L + ++ +A+ L +Y Sbjct: 258 RIQG-----------TADYHF--GKYHEAVKAFGHYLKDNAEPAARRDALYMLGMSYYRT 304 Query: 241 ALMDE 245 + + Sbjct: 305 GVYSQ 309 >gi|56414133|ref|YP_151208.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|168820115|ref|ZP_02832115.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|197249869|ref|YP_002145711.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197363055|ref|YP_002142692.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198246203|ref|YP_002214720.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205352014|ref|YP_002225815.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856194|ref|YP_002242845.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238911683|ref|ZP_04655520.1| hypothetical protein SentesTe_11172 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|56128390|gb|AAV77896.1| putative exported protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094532|emb|CAR60052.1| putative exported protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213572|gb|ACH50969.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197940719|gb|ACH78052.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205271795|emb|CAR36629.1| putative exported protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205343137|gb|EDZ29901.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206707997|emb|CAR32286.1| putative exported protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|320085021|emb|CBY94810.1| Uncharacterized protein ybgF Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|326622476|gb|EGE28821.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627055|gb|EGE33398.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 262 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 48/156 (30%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F + +P Sbjct: 115 SGTATTATPAPDAGTATSGAPVQSGDANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPD 174 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S Y VG+ + Sbjct: 175 STYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGV--------IM 226 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 227 QDKGDTAKAKAVYQQVINKYPGTDGAKQAQKRLNAM 262 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + +++Y +S Y A +++ Sbjct: 141 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN----------- 189 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 190 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKY 246 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 247 PGTDGAKQAQK 257 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I +YP+S Y +G + Y + +V+ Y Sbjct: 159 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 210 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A + V V +G+ A +Q V+ Y + A++A Sbjct: 211 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 256 Query: 231 ARL 233 RL Sbjct: 257 KRL 259 >gi|104783065|ref|YP_609563.1| hypothetical protein PSEEN4085 [Pseudomonas entomophila L48] gi|95112052|emb|CAK16779.1| conserved hypothetical protein [Pseudomonas entomophila L48] Length = 269 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K+++F KA + F R +P + A + V + G Sbjct: 142 EPGDPAKEKLFYEAAFDLIKQKDFDKASQAFAAFLRKYPNSQYAGNAQYWLGEVNLAKGD 201 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + YP+ V Y + DV T + + +++ +Y Sbjct: 202 LQGAGQAFAKVSQLYPQHSKVPDSLYKLA--------DVERRMGHTDKVKGILQQVITQY 253 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 254 PGTSAAQLAQRDLQKL 269 Score = 52.8 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 45/120 (37%), Gaps = 14/120 (11%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q+ Q + + +Y NS Y A++++ LA +++ A Sbjct: 162 QKDFDKASQAFAAFLRKYPNSQYAGNAQYWLGEVN--LAKGDLQ------------GAGQ 207 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 F V Y +++ +L + + D+ + ++ + +YP A+ + ++ Sbjct: 208 AFAKVSQLYPQHSKVPDSLYKLADVERRMGHTDKVKGILQQVITQYPGTSAAQLAQRDLQ 267 >gi|85858811|ref|YP_461013.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB] gi|85721902|gb|ABC76845.1| tetratricopeptide repeat domain protein [Syntrophus aciditrophicus SB] Length = 836 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 72/213 (33%), Gaps = 27/213 (12%) Query: 52 TDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D+R + ++ + A + N+ +AY + R +P + + L + Y G+ Sbjct: 262 PDLRSRNDLVNFRLAECLEQAGNYEEAYAAYEDVIRKYPTSRYKQDVLYKMGEILYRTGR 321 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ--RATKLMLQYMSRIVE 167 + A Y+ YP+ +L+G + Q R R + Sbjct: 322 FTHAIEKLRNYLAGYPDGPYASRSSFLLGYCFQQTGRQTDGALWYRNALNKWDNFEELPA 381 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 + L ++ + + + +Y A F L Y + + Sbjct: 382 -------------------DVL--YDLGLTLFSWQ--DYSRAASLFATYLNLYPEGGSKK 418 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 AM L ++ L A +V SL+ E YP+ Sbjct: 419 SAMFYLGRSFYTLNRFASALKVFSLLLENYPES 451 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 65/215 (30%), Gaps = 41/215 (19%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 R++ R+ + + D R V+E A + + +A + +LL Sbjct: 171 RKTGRESDVKNSLDSPSPR-VFETANIHFDACRYERAAAILSSIVSK----KHNDDALLE 225 Query: 100 -----SAFVQY-----SAGKYQQ-AASLGEEYITQYP--ESKNVDYVYYLVGMSYAQMIR 146 A + G + A + + +YP S+N D V + + Q Sbjct: 226 NSLRLLADCYFFLGKGKDGSFNLKAVDAYKHILRRYPDLRSRN-DLVNFRLAECLEQA-- 282 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 + ++ +Y S Y + + + + G + Sbjct: 283 ------GNYEEAYAAYEDVIRKYPTSRYKQDVLYKMGEIL--------------YRTGRF 322 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 AI + + LA Y D +A + L + Sbjct: 323 THAIEKLRNYLAGYPDGPYASRSSFLLGYCFQQTG 357 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 63/199 (31%), Gaps = 35/199 (17%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 DV T Q +Y+ + + F+ A E +P A +S + + Sbjct: 293 EDVIRKYPTSRYKQDVLYKMGEILYRTGRFTHAIEKLRNYLAGYPDGPYASRSSFLLGYC 352 Query: 104 QYSAGK-------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 G+ Y+ A + + + P V Y +G++ +D Sbjct: 353 FQQTGRQTDGALWYRNALNKWDNFEEL-PAD-----VLYDLGLTLFSW-QDYSR------ 399 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + Y K A +GR + + +A+ F L+ Sbjct: 400 -AASLFATYLNLYPEGGSKKSAM--------------FYLGRSFYTLNRFASALKVFSLL 444 Query: 217 LANYSDAEHAEEAMARLVE 235 L NY ++ A E++ + Sbjct: 445 LENYPESGEAYESILFMAN 463 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 35/115 (30%), Gaps = 15/115 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKG-ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + I+ RY + F + Q E Y A ++ Sbjct: 249 KAVDAYKHILRRYPDLRSRNDLVNFRLAECLEQAGNYE----------EAYAA----YED 294 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 V+ Y + + ++ + ++ E A E + YP G +A L+ Sbjct: 295 VIRKYPTSRYKQDVLYKMGEILYRTGRFTHAIEKLRNYLAGYPDGPYASRSSFLL 349 >gi|83647594|ref|YP_436029.1| hypothetical protein HCH_04913 [Hahella chejuensis KCTC 2396] gi|83635637|gb|ABC31604.1| uncharacterized protein conserved in bacteria [Hahella chejuensis KCTC 2396] Length = 278 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 59/151 (39%), Gaps = 8/151 (5%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 + + ++ + +++ Y++A +K + + KA E + + P + ++ Sbjct: 136 SASSGEETLELTPNKAPPSAAEQQEYDQAFDLIKRREYDKAVEALHAFIKKHPDSELSAN 195 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + V K +QA + +YPE + Y +G++Y ++ + Sbjct: 196 AYYWLGEVYLVIPKLEQARQAFVVVVGKYPEHRKAPDAMYKLGVTYHRLGDNA------- 248 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 +Y+S V R+ + A+ Y+ + Sbjct: 249 -EAKKYLSETVSRFPGTSPANLAKDYLRQVQ 278 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ YD ++ + ++++ +S A +++ G YL Sbjct: 165 FDLIKRREYD-----KAVEALHAFIKKHPDSELSANAYYWL--------------GEVYL 205 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + A F +V+ Y + A +AM +L Y L EA++ +S R+P Sbjct: 206 VIPKLEQARQAFVVVVGKYPEHRKAPDAMYKLGVTYHRLGDNAEAKKYLSETVSRFPGTS 265 Query: 262 WARYVETLVK 271 A + ++ Sbjct: 266 PANLAKDYLR 275 >gi|323524836|ref|YP_004226989.1| tol-pal system protein YbgF [Burkholderia sp. CCGE1001] gi|323381838|gb|ADX53929.1| tol-pal system protein YbgF [Burkholderia sp. CCGE1001] Length = 249 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 49/132 (37%), Gaps = 8/132 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + + A + +F A F +P + + Y+ Y+ + Sbjct: 126 PGETDAFNAASQQFRNGDFKNAAASFRSFISKYPNSPYQPTAQYWLGNALYALRDYKGST 185 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + + + +YP+ L+ ++ Q+ + Q+A + + +I+ +Y S Sbjct: 186 ATWQGVVARYPQHPRAPEA--LLAIANNQLEQG----QKAA--ARKTLEQILAQYGGSDV 237 Query: 175 VKGARFYVTVGR 186 + A+ ++ + Sbjct: 238 AQSAQSKLSQIK 249 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 37/109 (33%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y NSPY A++++ + R +Y + Sbjct: 142 GDFKNAAASFRSFISKYPNSPYQPTAQYWL--------GNALYALR------DYKGSTAT 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q V+A Y A EA+ + + AR+ + I +Y Sbjct: 188 WQGVVARYPQHPRAPEALLAIANNQLEQGQKAAARKTLEQILAQYGGSD 236 >gi|187922762|ref|YP_001894404.1| tol-pal system protein YbgF [Burkholderia phytofirmans PsJN] gi|187713956|gb|ACD15180.1| tol-pal system protein YbgF [Burkholderia phytofirmans PsJN] Length = 252 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 47/126 (37%), Gaps = 8/126 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + A + +F A F FP + + Y+ Y+ + + + Sbjct: 135 FNAASQQFRNGDFKNAAASFRTFIAKFPNSPYQPTAQYWLGNALYALRDYKGSTATWQGV 194 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +YP+ L+ ++ Q+ + Q+A + + +IV +Y S + A+ Sbjct: 195 VQKYPQHPRAPEA--LLAIANNQLEQG----QKAA--AKKTLEQIVAQYGGSDVAQSAQS 246 Query: 181 YVTVGR 186 ++ + Sbjct: 247 KLSQIK 252 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 36/109 (33%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + ++ NSPY A++++ + R +Y + Sbjct: 145 GDFKNAAASFRTFIAKFPNSPYQPTAQYWL--------GNALYALR------DYKGSTAT 190 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q V+ Y A EA+ + + A++ + I +Y Sbjct: 191 WQGVVQKYPQHPRAPEALLAIANNQLEQGQKAAAKKTLEQIVAQYGGSD 239 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 22/132 (16%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Q+ G ++ AA+ +I ++P S Y +G + + R K Sbjct: 141 QFRNGDFKNAAASFRTFIAKFPNSPYQPTAQYWLGNALYAL--------RDYKGSTATWQ 192 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 +V++Y P A + I L++G+ AA + ++A Y + Sbjct: 193 GVVQKYPQHPRAPEAL--------------LAIANNQLEQGQKAAAKKTLEQIVAQYGGS 238 Query: 224 EHAEEAMARLVE 235 + A+ A ++L + Sbjct: 239 DVAQSAQSKLSQ 250 >gi|319956171|ref|YP_004167434.1| hypothetical protein Nitsa_0415 [Nitratifractor salsuginis DSM 16511] gi|319418575|gb|ADV45685.1| hypothetical protein Nitsa_0415 [Nitratifractor salsuginis DSM 16511] Length = 218 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 58/185 (31%), Gaps = 9/185 (4%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 +I L G + + Y+ + KA + + + Sbjct: 9 LLAILTVTLGGCFGIGEKKQEYNKSAQAW-----YDAIQSSISHDELEKADKQYLSLRSE 63 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 + + ++L A + +Y A +E++ +Y +Y +L + I Sbjct: 64 HIDSALLPTAMLALAQAHMADEEYLLANYYLDEFLKKYARGAWAEYARFLKLKASFLGIH 123 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IGRYYLKRG 204 D+ DQ+ L + S Y + + ++A + I Y + G Sbjct: 124 DINKDQKLVADTLAQCQSFYASHRGSRYAPLVQTMIVRL--EMAQYLLNADIAHLYDRIG 181 Query: 205 EYVAA 209 + AA Sbjct: 182 KAEAA 186 >gi|158338709|ref|YP_001519886.1| TPR domain-containing protein [Acaryochloris marina MBIC11017] gi|158308950|gb|ABW30567.1| TPR domain protein [Acaryochloris marina MBIC11017] Length = 374 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 35/103 (33%), Gaps = 10/103 (9%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++Y + + N+ A NQ P A S Y +Y+ A + Sbjct: 247 TPDDLYVQGTDKFQRGNYQGAIADLNQSIDLNPQNAFAYNSR---GNAYYELQQYEDAIA 303 Query: 116 LGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATK 156 ++ I P DY Y+ G+++ M + Q K Sbjct: 304 QYDQAIALNP-----DYAEAYFNRGLAHQLMGNNAQAQQDHLK 341 >gi|295675610|ref|YP_003604134.1| tol-pal system protein YbgF [Burkholderia sp. CCGE1002] gi|295435453|gb|ADG14623.1| tol-pal system protein YbgF [Burkholderia sp. CCGE1002] Length = 249 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 50/132 (37%), Gaps = 8/132 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + E + A + +F A F +P + + Y+ Y+ + Sbjct: 126 PGETEAFNAASQQFRSGDFKSAAASFRSFISKYPSSPYQPTAQYWLGNALYALRDYKGST 185 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 ++ + + +YP+ L+ ++ Q+ + Q+A + + +IV +Y S Sbjct: 186 AVWQGIVAKYPQHPRAPEA--LLAIANNQLEQG----QKAA--AKKTLEQIVAQYAGSDV 237 Query: 175 VKGARFYVTVGR 186 + A+ ++ + Sbjct: 238 AQSAQSKLSQIK 249 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 35/109 (32%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y +SPY A++++ + R Y A Sbjct: 142 GDFKSAAASFRSFISKYPSSPYQPTAQYWL--------GNALYALRDY---KGSTAVW-- 188 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Q ++A Y A EA+ + + A++ + I +Y Sbjct: 189 -QGIVAKYPQHPRAPEALLAIANNQLEQGQKAAAKKTLEQIVAQYAGSD 236 >gi|15838493|ref|NP_299181.1| hypothetical protein XF1895 [Xylella fastidiosa 9a5c] gi|9106988|gb|AAF84701.1|AE004009_8 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 271 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 49/154 (31%), Gaps = 10/154 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 + S +++ D+ E Y A LK ++ A E F + +P + Sbjct: 124 MSEQSPNIHGDASALTISNEERIAYNVAFDALKNSKYADAAELFLSFLQLYPNGVYTPNA 183 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L Y+ + A + +++YP + A ++ Sbjct: 184 LYWLGESYYAMHDFVSAEAQFRSLLSRYPTHDKASGSLLKEALCQANQGKNDD------- 236 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 + +++ +Y + + A+ + + A Sbjct: 237 -AQHSLEQVLSQYPGTDAARLAQERLQSIKLSQA 269 Score = 42.0 bits (98), Expect = 0.097, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + ++ Y N Y A +++ G Y ++V+A +F+ + Sbjct: 162 DAAELFLSFLQLYPNGVYTPNALYWL--------------GESYYAMHDFVSAEAQFRSL 207 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 L+ Y + A ++ + D+A+ + + +YP AR + ++ Sbjct: 208 LSRYPTHDKASGSLLKEALCQANQGKNDDAQHSLEQVLSQYPGTDAARLAQERLQ 262 Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 23/58 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 LK +Y A F L Y + + A+ L E+Y A+ A + RYP Sbjct: 155 LKNSKYADAAELFLSFLQLYPNGVYTPNALYWLGESYYAMHDFVSAEAQFRSLLSRYP 212 >gi|46446024|ref|YP_007389.1| hypothetical protein pc0390 [Candidatus Protochlamydia amoebophila UWE25] gi|46399665|emb|CAF23114.1| hypothetical protein pc0390 [Candidatus Protochlamydia amoebophila UWE25] Length = 468 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 54/148 (36%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A +++ P + + +L A + +++A + I ++P+ + Y Sbjct: 151 ALTIYDEIIVAMPNSDMTVNALYSKAQLLQKMESFREAIETYQILIRRFPKHEMTPLCYL 210 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + SY+Q + L + E + + A YV ++ A + Sbjct: 211 KIAESYSQQSVYEFQNPDILALAELNSRKFKEEFPREEKTELAERYVQRIKDMYAKGLCD 270 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDA 223 +G +Y + G AA F+ + + D Sbjct: 271 MGLFYERMGHPDAAAIYFRSSIEEFPDT 298 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 30/80 (37%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 S + RY + Y K + +QN+ A + F + FP + A ++ Sbjct: 25 SKSRPFSSQQEAQRYLNQHYNKGCHYYNKQNWRFAMDEFEKVVYFFPNSTEAAEAYYYLG 84 Query: 102 FVQYSAGKYQQAASLGEEYI 121 + +Y A + +Y+ Sbjct: 85 VCYFERKEYDFANNAFSKYL 104 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 36/121 (29%), Gaps = 32/121 (26%) Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + + Y+ Q+ Y G Y + + + ++V + N Sbjct: 31 SSQQEAQRYLNQH----------YNKGCHYYNK--------QNWRFAMDEFEKVVYFFPN 72 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 S A +Y+ V Y +R EY A F L + E+A+ Sbjct: 73 STEAAEAYYYLGVC--------------YFERKEYDFANNAFSKYLTSVEQPAFFEDAVH 118 Query: 232 R 232 Sbjct: 119 Y 119 >gi|226945711|ref|YP_002800784.1| tol-pal system YbgF-like protein [Azotobacter vinelandii DJ] gi|226720638|gb|ACO79809.1| tol-pal system YbgF-like protein [Azotobacter vinelandii DJ] Length = 273 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 47/136 (34%), Gaps = 8/136 (5%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 D ++ Y+ A +K ++F KA + F +P + A + V + G Sbjct: 146 PADPEKEKLYYDAAFDLIKTKDFEKASQAFTAFLHKYPNSQYAGNAQYWLGEVNLAKGDL 205 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 Q A YP+ V Y + DV T+ + +++ +Y Sbjct: 206 QGAGQAFARVSQNYPKHSKVPDSLYKLA--------DVERRLGNTEKAKSALQQVIAQYP 257 Query: 171 NSPYVKGARFYVTVGR 186 + + A+ + R Sbjct: 258 GTSAAQLAQRDLQTMR 273 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 46/119 (38%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + + Q + + +Y NS Y A++++ LA +++ A Sbjct: 166 KDFEKASQAFTAFLHKYPNSQYAGNAQYWLGEVN--LAKGDLQ------------GAGQA 211 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 F V NY +++ +L + L ++A+ + + +YP A+ + ++ Sbjct: 212 FARVSQNYPKHSKVPDSLYKLADVERRLGNTEKAKSALQQVIAQYPGTSAAQLAQRDLQ 270 >gi|83746169|ref|ZP_00943223.1| Tol system periplasmic component YbgF [Ralstonia solanacearum UW551] gi|83727135|gb|EAP74259.1| Tol system periplasmic component YbgF [Ralstonia solanacearum UW551] Length = 232 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 17/129 (13%), Positives = 41/129 (31%), Gaps = 8/129 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 +++ Y+ A+ + +F A F+ + +P + + Y+ Y+ + Sbjct: 109 PGEKDEYDAALKTFQGGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGST 168 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + E P+ V Q+A + + +V +Y + Sbjct: 169 YVLENMARANPQHPKAPEALLQVA------TNQGESGQKAA--ARKTLEAVVVQYPGTEQ 220 Query: 175 VKGARFYVT 183 K A + Sbjct: 221 AKTASSRLK 229 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K S V++Y SPY+ A+ N L Y +R Y + Sbjct: 125 GDFKGAGNQFSAFVKKYPQSPYLPLAQ---FWLGNAL----------YAQRD-YKGSTYV 170 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + + A EA+ ++ AR+ + + +YP A+ + +K Sbjct: 171 LENMARANPQHPKAPEALLQVATNQGESGQKAAARKTLEAVVVQYPGTEQAKTASSRLK 229 >gi|168230634|ref|ZP_02655692.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168238900|ref|ZP_02663958.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194471411|ref|ZP_03077395.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736266|ref|YP_002113857.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|200389992|ref|ZP_03216603.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|194457775|gb|EDX46614.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711768|gb|ACF90989.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288322|gb|EDY27703.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199602437|gb|EDZ00983.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205334782|gb|EDZ21546.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|322615816|gb|EFY12734.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621375|gb|EFY18231.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623632|gb|EFY20470.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628906|gb|EFY25687.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634884|gb|EFY31614.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636588|gb|EFY33292.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641773|gb|EFY38407.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647829|gb|EFY44309.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651361|gb|EFY47743.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652662|gb|EFY49011.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658643|gb|EFY54904.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664928|gb|EFY61119.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668403|gb|EFY64559.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670509|gb|EFY66642.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675249|gb|EFY71325.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679675|gb|EFY75716.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684849|gb|EFY80848.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323191724|gb|EFZ76977.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200618|gb|EFZ85693.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202289|gb|EFZ87337.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205442|gb|EFZ90408.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212130|gb|EFZ96955.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216149|gb|EGA00878.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221360|gb|EGA05779.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226783|gb|EGA10974.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230997|gb|EGA15113.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234170|gb|EGA18259.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238135|gb|EGA22193.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243570|gb|EGA27588.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323251394|gb|EGA35266.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323260622|gb|EGA44231.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264693|gb|EGA48195.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270957|gb|EGA54392.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 262 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F + +P + + + Y+ GK AA Sbjct: 145 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 204 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S Y VG+ + D+ T +++ +Y + K A+ Sbjct: 205 VVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQ 256 Query: 180 FYVTVG 185 + Sbjct: 257 KRLNAM 262 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + +++Y +S Y A +++ Sbjct: 141 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN----------- 189 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 190 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKY 246 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 247 PGTDGAKQAQK 257 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I +YP+S Y +G + Y + +V+ Y Sbjct: 159 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 210 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A + V V +G+ A +Q V+ Y + A++A Sbjct: 211 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 256 Query: 231 ARL 233 RL Sbjct: 257 KRL 259 >gi|16759689|ref|NP_455306.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142538|ref|NP_805880.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|167554284|ref|ZP_02348025.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|213427707|ref|ZP_03360457.1| hypothetical protein SentesTyphi_20229 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213582021|ref|ZP_03363847.1| hypothetical protein SentesTyph_12824 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213857529|ref|ZP_03384500.1| hypothetical protein SentesT_20489 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25340111|pir||AB0593 probable exported protein STY0796 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501982|emb|CAD05212.1| putative exported protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29138169|gb|AAO69740.1| putative exported protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|205321484|gb|EDZ09323.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 262 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F + +P + + + Y+ GK AA Sbjct: 145 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 204 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S Y VG+ + D+ T +++ +Y + K A+ Sbjct: 205 VVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQ 256 Query: 180 FYVTVG 185 + Sbjct: 257 KRLNAM 262 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + +++Y +S Y A +++ Sbjct: 141 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN----------- 189 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 190 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKY 246 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 247 PGTDGAKQAQK 257 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I +YP+S Y +G + Y + +V+ Y Sbjct: 159 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 210 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A + V V +G+ A +Q V+ Y + A++A Sbjct: 211 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 256 Query: 231 ARL 233 RL Sbjct: 257 KRL 259 >gi|301062450|ref|ZP_07203102.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] gi|300443450|gb|EFK07563.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] Length = 313 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 50/184 (27%), Gaps = 31/184 (16%) Query: 92 VARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 + A G Y +A S E +I +P + V L+G+ Y Sbjct: 29 YTEQVVIDATGQFDFAHSLMDKGDYSRAISEFERFIYFFPTDRRVPQARQLIGLCYLND- 87 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 + + SP K + + G Y + G Sbjct: 88 -------GKFGEARKVFAACYRADPESPLAKKSL--------------LLTGESYYREGV 126 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 Y A F VL EA+ RL + EA E ++ P + Sbjct: 127 YDKAEGFFGEVLKRDPSFSLRNEALYRLGWTRMQENRWREASEDFKRVE---PGSLFYEK 183 Query: 266 VETL 269 + L Sbjct: 184 ADRL 187 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 17/129 (13%), Positives = 42/129 (32%), Gaps = 14/129 (10%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ A + + ++S+A F + FP ++ + + GK+ +A + + Sbjct: 41 FDFAHSLMDKGDYSRAISEFERFIYFFPTDRRVPQARQLIGLCYLNDGKFGEAR---KVF 97 Query: 121 ITQYPESKNVDYV---YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 Y L G SY + + + +++R + Sbjct: 98 AACYRADPESPLAKKSLLLTGESYYR--------EGVYDKAEGFFGEVLKRDPSFSLRNE 149 Query: 178 ARFYVTVGR 186 A + + R Sbjct: 150 ALYRLGWTR 158 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 50/130 (38%), Gaps = 11/130 (8%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 TD R + + +L + F +A + F C R P + +A+KSLL++ Y G Y Sbjct: 68 PTDRRVPQARQLIGLCYLNDGKFGEARKVFAACYRADPESPLAKKSLLLTGESYYREGVY 127 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +A E + + P + Y +G + Q R + + R+ Sbjct: 128 DKAEGFFGEVLKRDPSFSLRNEALYRLGWTRMQENR--------WREASEDFKRVE---P 176 Query: 171 NSPYVKGARF 180 S + + A Sbjct: 177 GSLFYEKADR 186 >gi|260597141|ref|YP_003209712.1| hypothetical protein CTU_13490 [Cronobacter turicensis z3032] gi|260216318|emb|CBA29306.1| Uncharacterized protein ybgF [Cronobacter turicensis z3032] Length = 236 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 47/126 (37%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ +A F+ + +P + + + Y+ GK AA Sbjct: 119 YNAAIALVQDKSRQDEAITAFSNFIKQYPDSTYQPNAHYWLGQLNYNKGKKDDAAYYFAS 178 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S Y VG+ + D+ T +++ +Y + K A+ Sbjct: 179 VVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTEGAKQAQ 230 Query: 180 FYVTVG 185 + Sbjct: 231 KRLNAM 236 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 44/123 (35%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +A + +I QYP+S +Y +G + Y + +V+ Y Sbjct: 133 DEAITAFSNFIKQYPDSTYQPNAHYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 184 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A + V V +G+ A +Q V++ Y E A++A Sbjct: 185 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTEGAKQAQ 230 Query: 231 ARL 233 RL Sbjct: 231 KRL 233 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + S +++Y +S Y A +++ Sbjct: 115 ANTDYNAAIALVQDKSRQDEAITAFSNFIKQYPDSTYQPNAHYWLGQLN----------- 163 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 164 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVISKY 220 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 221 PGTEGAKQAQK 231 >gi|291279228|ref|YP_003496063.1| hypothetical protein DEFDS_0831 [Deferribacter desulfuricans SSM1] gi|290753930|dbj|BAI80307.1| hypothetical protein [Deferribacter desulfuricans SSM1] Length = 647 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 65/198 (32%), Gaps = 29/198 (14%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-----YQ 111 +V +A ++ ++ A A+++ V Y G+ Y Sbjct: 136 AEKVLAEADEYVNNGLYNNAITKLLDLISTHKNDFYAQEAYYKLGMVYYKLGEDDPKNYL 195 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 +AA ++ +++P+ Y +S + + R++ Y N Sbjct: 196 KAADYLADFASKFPDHYLASDALYYSALSKEKA--------GMYYEAIFDYKRVILTYPN 247 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 + K + F + Y G+Y AI + + D E +A Sbjct: 248 TLNAKKSYFKIVNI--------------YENIGQYDKAINALKEYSDKFEDNSV--EVLA 291 Query: 232 RLVEAYVALALMDEAREV 249 R+ + Y L ++ A+E Sbjct: 292 RIGKLYFLLKDIELAKEY 309 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 78/217 (35%), Gaps = 28/217 (12%) Query: 53 DVRYQREVYEKAVLFLKEQ-----NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 D Q Y+ +++ K N+ KA +Y + FP +A +L SA + A Sbjct: 169 DFYAQEAYYKLGMVYYKLGEDDPKNYLKAADYLADFASKFPDHYLASDALYYSALSKEKA 228 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G Y +A + I YP + N Y+ ++ + I + + + Sbjct: 229 GMYYEAIFDYKRVILTYPNTLNAKKSYF-KIVNIYENIGQYD-------KAINALKEYSD 280 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 ++ ++ + L K++E+ + Y + I + +L D Sbjct: 281 KFEDN--SVEVLARIGKLYFLL--KDIELAKEYF-----IKIIDKKNDILKLGPDT---- 327 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 + + + + +D A + S I YP+ +A Sbjct: 328 --LFAIAKTFEVKGEIDYAINIYSKIYNIYPESKYAD 362 >gi|209517618|ref|ZP_03266456.1| tol-pal system protein YbgF [Burkholderia sp. H160] gi|209501914|gb|EEA01932.1| tol-pal system protein YbgF [Burkholderia sp. H160] Length = 252 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 50/132 (37%), Gaps = 8/132 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + + A + +F A F +P + + Y+ Y+ + Sbjct: 129 PGETDAFNAASQQFRSGDFKNAAASFRSFISKYPNSPYQPTAQYWLGNALYALRDYKGST 188 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 ++ + + +YP+ L+ ++ Q+ + Q+A + + +IV +Y S Sbjct: 189 AVWQGVVAKYPQHPRAPEA--LLAIANNQLEQG----QKAA--AKKTLEQIVAQYGGSDV 240 Query: 175 VKGARFYVTVGR 186 + A+ ++ + Sbjct: 241 AQSAQSKLSQIK 252 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 35/109 (32%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y NSPY A++++ + R Y A Sbjct: 145 GDFKNAAASFRSFISKYPNSPYQPTAQYWL--------GNALYALRDY---KGSTAVW-- 191 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Q V+A Y A EA+ + + A++ + I +Y Sbjct: 192 -QGVVAKYPQHPRAPEALLAIANNQLEQGQKAAAKKTLEQIVAQYGGSD 239 >gi|283780565|ref|YP_003371320.1| hypothetical protein Psta_2794 [Pirellula staleyi DSM 6068] gi|283439018|gb|ADB17460.1| Tetratricopeptide domain protein [Pirellula staleyi DSM 6068] Length = 789 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 68/200 (34%), Gaps = 17/200 (8%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 A + +FP +G +LL A V + G+ Q+A + ++ S Sbjct: 596 KLDLAAAMCQRLQTEFPESGFVDDALLQLAEVARTQGELQRAIGIFSRLVSM-QTSTLRG 654 Query: 132 YVYYLVGMSYAQMIRDVPYDQ--RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + V + Y M + Q ++ + + +S V A + Sbjct: 655 EAQFGVALCYDDMSAKAEPAAAAQLQDRAFQEYKKVYDEFPDSGRVGEAVAKM------- 707 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 YY + +Y A+ F+ VLA+ DA+ + + + EAR+ Sbjct: 708 -------ANYYYIQKDYARAVDTFETVLASQPDAKFLDVILFNYGRCLYRMERKAEARQR 760 Query: 250 VSLIQERYPQGYWARYVETL 269 + +P+ A + + Sbjct: 761 FDQLISEFPESPLAADAKKI 780 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 33/87 (37%), Gaps = 10/87 (11%) Query: 64 AVLFLKEQN-FSKAYEYFNQC---SRDFPFAGVARKSL--LMSAFVQYSAGKYQQAASLG 117 +L + + +A YF A+++ L Y A Y + + Sbjct: 101 GNFYLDRERAYDRARPYFESVAAEENR----DEAQRAEATLKLGICYYHARNYGKCFQIM 156 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM 144 + I YP S V+ YY +G+ + Q+ Sbjct: 157 RDVIEDYPVSPQVNEAYYYIGLGHFQL 183 Score = 43.6 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 38/147 (25%), Gaps = 53/147 (36%) Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG-E 205 D D T ++ ++ERY S + A + G +YL R Sbjct: 65 DARLDAEETDKAVEIWKSVIERYPRSKHRFEASLRL--------------GNFYLDRERA 110 Query: 206 Y---------VAA------IPRF-----------------------QLVLANYSDAEHAE 227 Y VAA R + V+ +Y + Sbjct: 111 YDRARPYFESVAAEENRDEAQRAEATLKLGICYYHARNYGKCFQIMRDVIEDYPVSPQVN 170 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQ 254 EA + + L A + + Sbjct: 171 EAYYYIGLGHFQLGHYSRAISALEKVG 197 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 34/90 (37%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + VY + R V + A + ++++++A + F P A L Sbjct: 688 KKVYDEFPDSGRVGEAVAKMANYYYIQKDYARAVDTFETVLASQPDAKFLDVILFNYGRC 747 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYV 133 Y + +A ++ I+++PES Sbjct: 748 LYRMERKAEARQRFDQLISEFPESPLAADA 777 >gi|218886421|ref|YP_002435742.1| hypothetical protein DvMF_1325 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757375|gb|ACL08274.1| TPR repeat-containing protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 1122 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 78/229 (34%), Gaps = 36/229 (15%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS--RDFPFAGVARKSLLMSAF 102 D + V E+ E+A F+ ++ KA E RD P + L + Sbjct: 453 DEKGNPVPAPPVPAELLEQAKTFMVNADYPKALELLETLKGLRDTPKDMY-EEVLYLIGD 511 Query: 103 VQYSAGK------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 V Y+ K + + + E + +S V +G+ ++ ++ Sbjct: 512 VLYAQNKDNILPVFDKIITATSEAMNYNLKSHRVPQALLRLGLLNTRI--------GNSQ 563 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Y + + +Y + LA G KRG+Y A +FQ + Sbjct: 564 EAEGYFNLLRRQYPHDENAA------------LAMY--YAGEEAYKRGDYQKAADKFQSI 609 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 + ++ ++++ E L + +A S++ + W R+ Sbjct: 610 VQDFPESKYVREGSVSLARTLYKMGYYQQA---ASILD--FVDKRWGRF 653 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 7/83 (8%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 D +Y K ++ KA + F +DFP + R+ + A Y G Y Sbjct: 577 PHDENAALAMYYAGEEAYKRGDYQKAADKFQSIVQDFPESKYVREGSVSLARTLYKMGYY 636 Query: 111 QQAASLGE-------EYITQYPE 126 QQAAS+ + + +YP+ Sbjct: 637 QQAASILDFVDKRWGRFYLEYPQ 659 >gi|204930030|ref|ZP_03221051.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321024|gb|EDZ06225.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 262 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F + +P + + + Y+ GK AA Sbjct: 145 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 204 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S Y VG+ + D+ T +++ +Y + K A+ Sbjct: 205 VVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQ 256 Query: 180 FYVTVG 185 + Sbjct: 257 KRLNAM 262 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + +++Y +S Y A +++ G Sbjct: 141 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWL--------------G 186 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 187 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKY 246 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 247 PGTDGAKQAQK 257 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I +YP+S Y +G + Y + +V+ Y Sbjct: 159 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 210 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A + V V +G+ A +Q V+ Y + A++A Sbjct: 211 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 256 Query: 231 ARL 233 RL Sbjct: 257 KRL 259 >gi|319779139|ref|YP_004130052.1| TPR repeat containing exported protein [Taylorella equigenitalis MCE9] gi|317109163|gb|ADU91909.1| TPR repeat containing exported protein [Taylorella equigenitalis MCE9] Length = 220 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 55/144 (38%), Gaps = 8/144 (5%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 + + D+ + ++ Y+ A+ ++ N+ + + +P + + +L Sbjct: 84 KGTGDITAPTQVGDPTEQNAYDTALDLFRQGNYQASATALANFTSAYPTSVLVPSALFYE 143 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 +Y+ ++ + S + QYP ++ ++ ++ Y Sbjct: 144 GGSRYAIKDFKGSISTLNRMVEQYPNDPQAGDALLVIAGNHYELNNINEY--------KS 195 Query: 161 YMSRIVERYTNSPYVKGARFYVTV 184 ++RI+++Y +P A+ + + Sbjct: 196 TLNRIIKQYPGTPAADTAKERLNM 219 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 22/141 (15%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 ++ +A + G YQ +A+ + + YP S V + G S + Sbjct: 99 TEQNAYDTALDLFRQGNYQASATALANFTSAYPTSVLVPSALFYEGGSRYAI-------- 150 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + K + ++R+VE+Y N P A + + N E+ EY + + R Sbjct: 151 KDFKGSISTLNRMVEQYPNDPQAGDAL--LVIAGNH---YELN------NINEYKSTLNR 199 Query: 213 FQLVLANYSDAEHAEEAMARL 233 ++ Y A+ A RL Sbjct: 200 ---IIKQYPGTPAADTAKERL 217 Score = 39.3 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 39/120 (32%), Gaps = 15/120 (12%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 D+ Q + ++ Y S V A FY R Sbjct: 104 YDTALDLFR-QGNYQASATALANFTSAYPTSVLVPSALFYEGGSR--------------Y 148 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 ++ +I ++ Y + A +A+ + + L ++E + ++ I ++YP Sbjct: 149 AIKDFKGSISTLNRMVEQYPNDPQAGDALLVIAGNHYELNNINEYKSTLNRIIKQYPGTP 208 >gi|319943000|ref|ZP_08017283.1| hypothetical protein HMPREF0551_0129 [Lautropia mirabilis ATCC 51599] gi|319743542|gb|EFV95946.1| hypothetical protein HMPREF0551_0129 [Lautropia mirabilis ATCC 51599] Length = 273 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 53/132 (40%), Gaps = 8/132 (6%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + ++ +E A+ ++ NF A + F + ++ +P + +L QY+ G Y A Sbjct: 150 EQAEKNEFEAALALFRKSNFKAADQAFAKFAKTYPESPYLPTALYWQGGAQYAQGNYNGA 209 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + + I ++P+S L+G + D K Q RI + + N+P Sbjct: 210 VNTLQSLIQRFPDSARKADALLLIG--------NAQVDAGNDKAARQTFIRIGKEHPNTP 261 Query: 174 YVKGARFYVTVG 185 AR + Sbjct: 262 AANAARERLKAM 273 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 45/141 (31%), Gaps = 22/141 (15%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A K+ +A + ++ A ++ YPES + Y G Y Q Sbjct: 152 AEKNEFEAALALFRKSNFKAADQAFAKFAKTYPESPYLPTALYWQG--------GAQYAQ 203 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + + +++R+ +S A + IG + G AA Sbjct: 204 GNYNGAVNTLQSLIQRFPDSARKADAL--------------LLIGNAQVDAGNDKAARQT 249 Query: 213 FQLVLANYSDAEHAEEAMARL 233 F + + + A A RL Sbjct: 250 FIRIGKEHPNTPAANAARERL 270 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K Q ++ + Y SPY+ A ++ + +G Y A+ Sbjct: 167 SNFKAADQAFAKFAKTYPESPYLPTALYWQGGAQ--------------YAQGNYNGAVNT 212 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Q ++ + D+ +A+ + A V AR+ I + +P A +K Sbjct: 213 LQSLIQRFPDSARKADALLLIGNAQVDAGNDKAARQTFIRIGKEHPNTPAANAARERLK 271 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 2/80 (2%) Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 E E ++ + AA F Y ++ + A+ A A + A + Sbjct: 154 KNEFEAALALFRKSNFKAADQAFAKFAKTYPESPYLPTALYWQGGAQYAQGNYNGAVNTL 213 Query: 251 SLIQERYPQGYWARYVETLV 270 + +R+P AR + L+ Sbjct: 214 QSLIQRFPDS--ARKADALL 231 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 6/83 (7%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +Y + + N++ A + FP + +LL+ Q AG Sbjct: 184 PESPYLPTALYWQGGAQYAQGNYNGAVNTLQSLIQRFPDSARKADALLLIGNAQVDAGND 243 Query: 111 QQAASLGEEYITQ---YPESKNV 130 + A +I +P + Sbjct: 244 KAARQT---FIRIGKEHPNTPAA 263 >gi|33594230|ref|NP_881874.1| putative periplasmic protein [Bordetella pertussis Tohama I] gi|33598304|ref|NP_885947.1| putative periplasmic protein [Bordetella parapertussis 12822] gi|33603214|ref|NP_890774.1| putative periplasmic protein [Bordetella bronchiseptica RB50] gi|33564305|emb|CAE43606.1| putative periplasmic protein [Bordetella pertussis Tohama I] gi|33566862|emb|CAE39077.1| putative periplasmic protein [Bordetella parapertussis] gi|33568845|emb|CAE34603.1| putative periplasmic protein [Bordetella bronchiseptica RB50] gi|332383644|gb|AEE68491.1| putative periplasmic protein [Bordetella pertussis CS] Length = 229 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 44/132 (33%), Gaps = 8/132 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + ++ Y+ A+ ++ + A E +P + +A + +Y+ ++ A Sbjct: 106 QQEQAAYDGAIDLFRKGQYKDAAESLAAFIALYPNSQLAPTAQFYLGSSRYAMKDFKGAI 165 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + P + ++ S ++ + RIV Y +P Sbjct: 166 EQLNNLVQNAPTNARAPDALLVIAGSQIELNNRAG--------AKATLQRIVRDYPTTPA 217 Query: 175 VKGARFYVTVGR 186 A+ + + + Sbjct: 218 ANTAKSRLQLLQ 229 Score = 43.2 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 41/116 (35%), Gaps = 14/116 (12%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 K + ++ + Y NS A+FY+ R ++ AI + Sbjct: 125 KDAAESLAAFIALYPNSQLAPTAQFYLGSSR--------------YAMKDFKGAIEQLNN 170 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++ N A +A+ + + + L A+ + I YP A ++ ++ Sbjct: 171 LVQNAPTNARAPDALLVIAGSQIELNNRAGAKATLQRIVRDYPTTPAANTAKSRLQ 226 >gi|306991541|pdb|2XEV|A Chain A, Crystal Structure Of The Tpr Domain Of Xanthomonas Campestris Ybgf gi|306991542|pdb|2XEV|B Chain B, Crystal Structure Of The Tpr Domain Of Xanthomonas Campestris Ybgf gi|306991543|pdb|2XEV|C Chain C, Crystal Structure Of The Tpr Domain Of Xanthomonas Campestris Ybgf Length = 129 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 43/130 (33%), Gaps = 8/130 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 R Y A LK + A + F +P +L Y+ +Q A + Sbjct: 2 ARTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQ 61 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + +++YP +G+S ++ Q + ++ +Y S + Sbjct: 62 FRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNT--------EAQQTLQQVATQYPGSDAAR 113 Query: 177 GARFYVTVGR 186 A+ + R Sbjct: 114 VAQERLQSIR 123 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 41/115 (35%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q +E Y N Y A +++ G Y + A +F+ + Sbjct: 20 DASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFRDL 65 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++ Y + A + +L + EA++ + + +YP AR + ++ Sbjct: 66 VSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQ 120 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 27/80 (33%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 V +Y + +NF A F +P A LL QY GK Sbjct: 33 PNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKN 92 Query: 111 QQAASLGEEYITQYPESKNV 130 +A ++ TQYP S Sbjct: 93 TEAQQTLQQVATQYPGSDAA 112 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 26/70 (37%) Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A + LK G+Y A F L Y + + A+ L E+Y A A Sbjct: 1 MARTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEA 60 Query: 249 VVSLIQERYP 258 + RYP Sbjct: 61 QFRDLVSRYP 70 >gi|253687645|ref|YP_003016835.1| tol-pal system protein YbgF [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754223|gb|ACT12299.1| tol-pal system protein YbgF [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 258 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 46/135 (34%), Gaps = 9/135 (6%) Query: 50 SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + Y AV L+++ + +A F + +P + + + Y+ G Sbjct: 130 APASTGDANTDYNAAVALVLEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKG 189 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 K AA + YP+S VG+ + ++ ++V+ Sbjct: 190 KKDDAAYYFANVVKNYPKSPKSSEALLKVGV--------IMQEKGQADKAKAVYQQVVKM 241 Query: 169 YTNSPYVKGARFYVT 183 Y N+ K A+ + Sbjct: 242 YPNTESAKQAQKRLA 256 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 42/112 (37%), Gaps = 14/112 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + V++Y +S Y A +++ G+ +G+ A F V Sbjct: 156 QAISAFQAFVKKYPDSTYQPNANYWL--------------GQLNYNKGKKDDAAYYFANV 201 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + NY + + EA+ ++ D+A+ V + + YP A+ + Sbjct: 202 VKNYPKSPKSSEALLKVGVIMQEKGQADKAKAVYQQVVKMYPNTESAKQAQK 253 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 22/127 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y QA S + ++ +YP+S Y +G + Y + +V+ Sbjct: 152 KQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFANVVK 203 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SP A V V ++G+ A +Q V+ Y + E A+ Sbjct: 204 NYPKSPKSSEALLKVGVIMQ--------------EKGQADKAKAVYQQVVKMYPNTESAK 249 Query: 228 EAMARLV 234 +A RL Sbjct: 250 QAQKRLA 256 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ +Y AI FQ + Y D+ + A L + D+A + + + YP+ Sbjct: 149 LEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFANVVKNYPKS 208 Query: 261 YWARYVETLVK 271 + E L+K Sbjct: 209 --PKSSEALLK 217 >gi|213962073|ref|ZP_03390338.1| TPR-domain containing protein [Capnocytophaga sputigena Capno] gi|213955426|gb|EEB66743.1| TPR-domain containing protein [Capnocytophaga sputigena Capno] Length = 1001 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 69/215 (32%), Gaps = 25/215 (11%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYS 106 + Y + Y A + N++ A F + + P ++L A + Sbjct: 490 PAAAKTEEYSKGYYGLAYSQFNQHNYATAIVNFEKYLKQNPKDNVWKHDAMLRLADSYFV 549 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 GKY A + I + +S + DY Y +SY + R ++ + R V Sbjct: 550 TGKYWPAMEGYNKLIEE--KSADQDYAAYQKAISYGFVDRLPSK--------IEDLERFV 599 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + Y S A E+ Y+ +G + +Q ++ Y Sbjct: 600 KNYKGSNLRPNAL--------------FELANAYVTKGSTEKGVQYYQQLIKEYKGNVLV 645 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 AM R Y +A + I + YP Sbjct: 646 PRAMLREGLVYYNKGEDQKALTLFKTIAKDYPNTN 680 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 14/101 (13%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + ++ + +A Y + + + Y Y+ A E++ Sbjct: 252 GESYFNQKKYKEAIPYLQKYKGKK--GKFSNTDYYYLGYAFYKNNDYKAAI---EQFNKI 306 Query: 124 YPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + NV YY + Y + DQ+ + L Sbjct: 307 VGGNDNVAQNAYYHLAECYLK------TDQK--QQALNAFR 339 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 84/230 (36%), Gaps = 48/230 (20%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++E A ++ + + K +Y+ Q +++ + +++L V Y+ G+ Q+A +L Sbjct: 609 PNALFELANAYVTKGSTEKGVQYYQQLIKEYKGNVLVPRAMLREGLVYYNKGEDQKALTL 668 Query: 117 GEEYITQYPE---------------------SKNVDYV----------YYLVGMSYAQMI 145 + YP S+ + L G SY Sbjct: 669 FKTIAKDYPNTNEASQAVASAKLIYVDMGKVSEYAAWAKSLGYVEVTDLELEGASYEAAE 728 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 R Q +K + + ++ + N A E +G+ Y G+ Sbjct: 729 RQYL--QNNSKEAIAAFEKYLKDFPNGLRRTNA--------------EFYLGQLYFNSGQ 772 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 A+ ++ V + S+ E+ E+A+ R+ + + +A+ + +++ Sbjct: 773 KAKALTHYENVSKSGSN-EYGEQALTRVCQILLDAGSYLKAKPYLEELEK 821 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 82/248 (33%), Gaps = 53/248 (21%) Query: 52 TDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCS---------RDFPFAG---------- 91 + E Y + A L+ ++ N+++A E++N F F Sbjct: 97 PESPMSSEAYLQMANLYFQQGNYAEALEWYNAIDELGVSSEEKARFNFQKGYCLFHTGKQ 156 Query: 92 ---------------VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY---- 132 A + ++ Y + Y +A S E SKNV Y Sbjct: 157 AESKPYFESVQNNPLYADNAKYYLGYIAYDSDDYAKAESYFREVQDDATLSKNVSYFQAN 216 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLM--LQYMSRIV-ERYTNSPYVKGARFYVTVGRNQL 189 +Y+ + Y + I + TK + +++I+ E Y N K A Y+ + + Sbjct: 217 MYFKQAL-YDEAIEEGQKQLAKTKSAQEISELNKIIGESYFNQKKYKEAIPYLQKYKGK- 274 Query: 190 AAKEVEIGRYY------LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 + YY K +Y AAI +F ++ + A L E Y+ Sbjct: 275 -KGKFSNTDYYYLGYAFYKNNDYKAAIEQFNKIVGGNDNVAQN--AYYHLAECYLKTDQK 331 Query: 244 DEAREVVS 251 +A Sbjct: 332 QQALNAFR 339 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 68/207 (32%), Gaps = 24/207 (11%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 VTD+ + YE A + N +A F + +DFP + + +++G+ Sbjct: 713 EVTDLELEGASYEAAERQYLQNNSKEAIAAFEKYLKDFPNGLRRTNAEFYLGQLYFNSGQ 772 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 +A + E +++ ++ + + + D + Y+ + + Sbjct: 773 KAKALTHYEN-VSKSGSNEYGEQAL--------TRVCQILLDAGSYLKAKPYLEELEKT- 822 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEE 228 A+ N + R Y AI VL S D + Sbjct: 823 -----ATIAQNRTYAQSNLM--------RVCYNEKLYDKAIEYANKVLEEKSIDTRIKND 869 Query: 229 AMARLVEAYVALALMDEAREVVSLIQE 255 A L AY D+AR+ +Q+ Sbjct: 870 AYIVLARAYTQAGNDDQARKYYQEVQK 896 >gi|293603402|ref|ZP_06685829.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292818175|gb|EFF77229.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 228 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 17/151 (11%), Positives = 45/151 (29%), Gaps = 8/151 (5%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 S + ++ Y+ A+ ++ + A E + +P + +A Sbjct: 86 SAKPGAPSGTNPPGTAAGDPQEQAAYDGAMDLFRKGQYKDAAESLAAFTALYPNSQLAPS 145 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + +Y ++ A + + P++ ++ I Sbjct: 146 AQFYLGSSRYGMKDFKGAIEQLTAMVQKSPDNARAPDALLIIA---GGQIELNNR----- 197 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + RIV Y N+ A+ + + + Sbjct: 198 AGAKATLQRIVRDYPNAQAASTAKSRLQLLQ 228 Score = 42.0 bits (98), Expect = 0.079, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 39/116 (33%), Gaps = 14/116 (12%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 K + ++ Y NS A+FY+ R ++ AI + Sbjct: 124 KDAAESLAAFTALYPNSQLAPSAQFYLGSSR--------------YGMKDFKGAIEQLTA 169 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++ D A +A+ + + L A+ + I YP A ++ ++ Sbjct: 170 MVQKSPDNARAPDALLIIAGGQIELNNRAGAKATLQRIVRDYPNAQAASTAKSRLQ 225 >gi|315638115|ref|ZP_07893298.1| competence lipoprotein ComL [Campylobacter upsaliensis JV21] gi|315481795|gb|EFU72416.1| competence lipoprotein ComL [Campylobacter upsaliensis JV21] Length = 215 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 69/177 (38%), Gaps = 15/177 (8%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + S+ + F ++ ++Y S + Y + + L++++ KA +++ + Sbjct: 5 LLILSLIITFFTACSTKNKDELYNLSPSQW------YAQIIKDLQDKDLEKADTHYSGMA 58 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + + +L++ A +YQ A +EY ++ SKNVDY YL + + Sbjct: 59 SEHIADPLLEPTLIILAQAHMDEEEYQLAEFYLDEYNKKFGNSKNVDYTRYLKIKAKFEA 118 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +Q Q + ++ Y N+ Y + +T I +YL Sbjct: 119 FAVPNRNQALMLQSQQEIDNFLKEYPNTQYKPLVQTMLTK---------FNIAVFYL 166 >gi|291278704|ref|YP_003495539.1| hypothetical protein DEFDS_0275 [Deferribacter desulfuricans SSM1] gi|290753406|dbj|BAI79783.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 257 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 49/141 (34%), Gaps = 25/141 (17%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A+ Y GKY ++ + E++ +YP D Y +G Y + + Sbjct: 139 AYELYMKGKYFESLNKFNEFLKKYPNDDLSDNAMYWIGEIYYSQKDYI--------KCID 190 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 M ++++Y V A + Y++ G+ A+ + +L NY Sbjct: 191 TMKDLIKKYPQGNKVPDAYLKMAYA--------------YIEIGDQDNAVKYLKYLLDNY 236 Query: 221 SDAEHAEEA---MARLVEAYV 238 A A + L +Y Sbjct: 237 PATRAASLAKQKLDELGVSYE 257 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 52/133 (39%), Gaps = 8/133 (6%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + +Y A + + ++ FN+ + +P ++ ++ + YS Y + Sbjct: 128 DSADKTTIYSYAYELYMKGKYFESLNKFNEFLKKYPNDDLSDNAMYWIGEIYYSQKDYIK 187 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 ++ I +YP+ V Y + +Y ++ DQ ++Y+ +++ Y + Sbjct: 188 CIDTMKDLIKKYPQGNKVPDAYLKMAYAYIEIG-----DQDN---AVKYLKYLLDNYPAT 239 Query: 173 PYVKGARFYVTVG 185 A+ + Sbjct: 240 RAASLAKQKLDEL 252 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 31/129 (24%) Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 Y Y+ G L + +++Y N + L+ Sbjct: 139 AYELYMKG---------------KYFESLNKFNEFLKKYPN---------------DDLS 168 Query: 191 AKEVE-IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 + IG Y + +Y+ I + ++ Y +A ++ AY+ + D A + Sbjct: 169 DNAMYWIGEIYYSQKDYIKCIDTMKDLIKKYPQGNKVPDAYLKMAYAYIEIGDQDNAVKY 228 Query: 250 VSLIQERYP 258 + + + YP Sbjct: 229 LKYLLDNYP 237 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 10/87 (11%), Positives = 27/87 (31%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + D +Y ++ ++++ K + + +P + L A+ Sbjct: 156 NEFLKKYPNDDLSDNAMYWIGEIYYSQKDYIKCIDTMKDLIKKYPQGNKVPDAYLKMAYA 215 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNV 130 G A + + YP ++ Sbjct: 216 YIEIGDQDNAVKYLKYLLDNYPATRAA 242 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y+K G+Y ++ +F L Y + + ++ AM + E Y + + + + + ++YPQ Sbjct: 143 YMK-GKYFESLNKFNEFLKKYPNDDLSDNAMYWIGEIYYSQKDYIKCIDTMKDLIKKYPQ 201 Query: 260 GYWARYVE 267 G Sbjct: 202 GNKVPDAY 209 >gi|319762345|ref|YP_004126282.1| tol-pal system protein ybgf [Alicycliphilus denitrificans BC] gi|330825734|ref|YP_004389037.1| tol-pal system protein YbgF [Alicycliphilus denitrificans K601] gi|317116906|gb|ADU99394.1| tol-pal system protein YbgF [Alicycliphilus denitrificans BC] gi|329311106|gb|AEB85521.1| tol-pal system protein YbgF [Alicycliphilus denitrificans K601] Length = 262 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 47/132 (35%), Gaps = 8/132 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 ++ +E A+ + F +A F R +P +G + QY+ Y++A Sbjct: 139 PAEKRDFEAALAVFRSGKFPEAATAFGNFVRQYPQSGYVPSARFWLGNAQYATRDYKEAI 198 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + + + P+ +S I + + + T+ + + ++ Y S Sbjct: 199 ANFKGLLAAAPDHARAPEA----ALS----IANCQIELKDTRAARKTLEDLLRAYPQSEA 250 Query: 175 VKGARFYVTVGR 186 A+ + + Sbjct: 251 AAAAKERLARLK 262 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 49/143 (34%), Gaps = 22/143 (15%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A K +A + +GK+ +AA+ ++ QYP+S V + +G + Sbjct: 140 AEKRDFEAALAVFRSGKFPEAATAFGNFVRQYPQSGYVPSARFWLGNAQYAT-------- 191 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R K + ++ + A + + +L + AA Sbjct: 192 RDYKEAIANFKGLLAAAPDHARAPEAALSIANCQIEL--------------KDTRAARKT 237 Query: 213 FQLVLANYSDAEHAEEAMARLVE 235 + +L Y +E A A RL Sbjct: 238 LEDLLRAYPQSEAAAAAKERLAR 260 Score = 43.2 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 36/105 (34%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 V +Y S YV ARF++ + +Y AI F+ + Sbjct: 159 EAATAFGNFVRQYPQSGYVPSARFWLGNAQ--------------YATRDYKEAIANFKGL 204 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 LA D A EA + + L AR+ + + YPQ Sbjct: 205 LAAAPDHARAPEAALSIANCQIELKDTRAARKTLEDLLRAYPQSE 249 >gi|300770842|ref|ZP_07080719.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] gi|300762115|gb|EFK58934.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] Length = 1040 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 63/210 (30%), Gaps = 31/210 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++++ ++ + N S + +P + A + ++ G+Y A S + Sbjct: 620 LFQRGIIQGLQGNSSGKIATLQSVVQKYPKSNYADDVAFEIPYTYFTLGQYDHAISGLQS 679 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + +YP S V +G+ + L+ R+V++Y+ + K A Sbjct: 680 MVEKYPRSSYVPRALVTIGLVQYNQDNN--------DAALKTFQRVVDQYSTTDEAKQAM 731 Query: 180 FYVTVGR------------------NQLAAKE-----VEIGRYYLKRGEYVAAIPRFQLV 216 + L+ E RG Y A+ Sbjct: 732 RSIENIYLDKGDATGYIRYATGTNIGDLSTSEQDSRAFSTATTLFSRGNYQGAVEAVNAY 791 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEA 246 + + A E+ AL EA Sbjct: 792 FDKFPKPIQEKYARFIRAESNAALGKNQEA 821 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 27/201 (13%), Positives = 64/201 (31%), Gaps = 42/201 (20%) Query: 68 LKEQNFSKAYEYFN-----------QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 + +N++ + YF + + ++ A +S Y +A + Sbjct: 552 FRNENYNTSANYFERFLSMGGKEGIELNTR-------NDAIARLADSYFSLKNYGRAMTE 604 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 ++ I ++++ DY + G+ + + +V++Y S Y Sbjct: 605 YDKLI--NSKAQSQDYALFQRGIIQGLQGNSSGK--------IATLQSVVQKYPKSNYAD 654 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 F + Y G+Y AI Q ++ Y + + A+ + Sbjct: 655 DVAFEIPYT--------------YFTLGQYDHAISGLQSMVEKYPRSSYVPRALVTIGLV 700 Query: 237 YVALALMDEAREVVSLIQERY 257 D A + + ++Y Sbjct: 701 QYNQDNNDAALKTFQRVVDQY 721 Score = 35.5 bits (81), Expect = 7.6, Method: Composition-based stats. Identities = 8/65 (12%), Positives = 22/65 (33%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D + ++ + ++++ KA E+F + + A+ ++ Sbjct: 132 DYPASPNSKAAYFQIGRSYYAKKDYKKAIEWFTKIDGKNLAGAENTEYRFKLAYSRFMTE 191 Query: 109 KYQQA 113 Y A Sbjct: 192 DYTSA 196 >gi|124006636|ref|ZP_01691468.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134] gi|123987791|gb|EAY27482.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134] Length = 1020 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 67/206 (32%), Gaps = 40/206 (19%) Query: 61 YEKAVLFLKEQNFSKAYEYFN-----------QCSRDFPFAGVARKSLLMSAFVQYSAGK 109 Y + + + KA YF P++ ++ A Y K Sbjct: 527 YGLGYAYYNLREYDKALPYFQQCVTSWQLRTAAEEETTPYSD----AVTRLADCFYVQKK 582 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y A L +E I + DY YY G+ + Q L Q +V+ + Sbjct: 583 YANALHLYDELIAG--KHPEQDYAYYQQGV--------IKVAQGDYDLAKQKFEDVVQNF 632 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 NS Y A + + L+ G Y AI F ++ + A Sbjct: 633 PNSRYYDQALYEKALID--------------LENGHYSVAIAGFSTLMKERPHSLLRPNA 678 Query: 230 MARLVEAYVALALMDEA-REVVSLIQ 254 + + +Y +EA ++ ++++ Sbjct: 679 LLKRALSYQNFDNTNEAIKDYKAILK 704 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 72/211 (34%), Gaps = 23/211 (10%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +Q DV + Y + +YEKA++ L+ ++S A F+ ++ P + + +LL Sbjct: 621 AKQKFEDVVQNFPNSRYYDQALYEKALIDLENGHYSVAIAGFSTLMKERPHSLLRPNALL 680 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A + +A + + +P +S ++ T + Sbjct: 681 KRALSYQNFDNTNEAIKDYKAILKDHPTHSTAPSAL----LSLQDLLTQAGR----TDEL 732 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + + + NS RN A + G+Y AI F+ ++ Sbjct: 733 NEILRNYKKVNPNSK-----ALLTIDLRN--AEQAFF-------DGKYSEAIILFKAYIS 778 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREV 249 Y + A L EAY+ + A Sbjct: 779 KYPEGGS-PNAKYYLGEAYLNSGDNENALRY 808 Score = 39.7 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 16/128 (12%), Positives = 43/128 (33%), Gaps = 3/128 (2%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K + + + S VY ++ +++ ++N+ A + Sbjct: 1 MQKLIRYSLYLKTLYLFIFCVVTLSSTVYAQHTHVFKHPDRYFKRGKALFAKKNYVAAKQ 60 Query: 79 YFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL--GEEYITQYPESKNVDYVYY 135 F ++ + +V Y A +Q+ + ++++ +P V +Y Sbjct: 61 QFEDFLQKNKEETKHQENLIEARFYVAYLALILEQSNATKLYQKFVRTHPTHPKVAQAHY 120 Query: 136 LVGMSYAQ 143 G Y + Sbjct: 121 AWGNYYYE 128 >gi|163854961|ref|YP_001629259.1| putative periplasmic protein [Bordetella petrii DSM 12804] gi|163258689|emb|CAP40988.1| putative periplasmic protein [Bordetella petrii] Length = 225 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 19/148 (12%), Positives = 54/148 (36%), Gaps = 8/148 (5%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 Q + + ++ Y+ A+ ++ + +A E +P + +A + Sbjct: 86 PGQGGANNPPGATAADPREQAAYDGAIDQFRKGQYKEAAESLAAFVALYPNSQLAPTAKF 145 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 +Y+A Y+ A + + + P++ ++ S ++ Sbjct: 146 YLGSSRYAAKDYKGAIEQLNQLVQESPDNARAPDALLVIAGSQIELNNRAG--------A 197 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGR 186 + RIV+ Y ++P + A+ + + + Sbjct: 198 KASLQRIVKDYPSTPAAETAKSRLQLLQ 225 Score = 42.4 bits (99), Expect = 0.071, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 14/116 (12%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 K + ++ V Y NS A+FY+ R +Y AI + Sbjct: 121 KEAAESLAAFVALYPNSQLAPTAKFYLGSSR--------------YAAKDYKGAIEQLNQ 166 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++ D A +A+ + + + L A+ + I + YP A ++ ++ Sbjct: 167 LVQESPDNARAPDALLVIAGSQIELNNRAGAKASLQRIVKDYPSTPAAETAKSRLQ 222 >gi|156934763|ref|YP_001438678.1| tol-pal system protein YbgF [Cronobacter sakazakii ATCC BAA-894] gi|156533017|gb|ABU77843.1| hypothetical protein ESA_02603 [Cronobacter sakazakii ATCC BAA-894] Length = 265 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 47/126 (37%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ +A F+ + +P + + + Y+ GK AA Sbjct: 148 YNAAIALVQDKSRQDEAITAFSNFIKQYPDSTYQPNAHYWLGQLNYNKGKKDDAAYYFAS 207 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S Y VG+ + D+ T +++ +Y + K A+ Sbjct: 208 VVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 259 Query: 180 FYVTVG 185 + Sbjct: 260 KRLNAM 265 Score = 50.1 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +A + +I QYP+S +Y +G + Y + +V+ Y Sbjct: 162 DEAITAFSNFIKQYPDSTYQPNAHYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 213 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A + V V +G+ A +Q V++ Y + A++A Sbjct: 214 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 259 Query: 231 ARL 233 RL Sbjct: 260 KRL 262 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + S +++Y +S Y A +++ Sbjct: 144 ANTDYNAAIALVQDKSRQDEAITAFSNFIKQYPDSTYQPNAHYWLGQLN----------- 192 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 193 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVISKY 249 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 250 PGTDGAKQAQK 260 >gi|193212310|ref|YP_001998263.1| tol-pal system protein YbgF [Chlorobaculum parvum NCIB 8327] gi|193085787|gb|ACF11063.1| tol-pal system protein YbgF [Chlorobaculum parvum NCIB 8327] Length = 263 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 51/139 (36%), Gaps = 8/139 (5%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V S ++ + + +L +++++++ A E F + P + + A Y Sbjct: 132 VSKPSASEASMSENLLSEGLLLMEKKDYNSARERFKEFMSKNPNSPKVSDAQFYLAESYY 191 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y++A + I +Y +S Y G++ + I D + Sbjct: 192 EEQWYEKAILEYQVVIAKYTKSAKRPAALYKQGLA-FEQIGD-------KANAKARYRDV 243 Query: 166 VERYTNSPYVKGARFYVTV 184 V Y+ +P + A+ + Sbjct: 244 VNLYSKTPEARLAKKKMDA 262 Score = 38.9 bits (90), Expect = 0.72, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 32/90 (35%), Gaps = 14/90 (15%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + + + NSP V A+ + Y + Y AI +Q+V+ Sbjct: 162 ARERFKEFMSKNPNSPKVSDAQ--------------FYLAESYYEEQWYEKAILEYQVVI 207 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAR 247 A Y+ + A+ + A+ + A+ Sbjct: 208 AKYTKSAKRPAALYKQGLAFEQIGDKANAK 237 Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 28/60 (46%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 +++ +Y +A RF+ ++ ++ +A L E+Y ++A ++ +Y + Sbjct: 154 MEKKDYNSARERFKEFMSKNPNSPKVSDAQFYLAESYYEEQWYEKAILEYQVVIAKYTKS 213 >gi|89900878|ref|YP_523349.1| hypothetical protein Rfer_2094 [Rhodoferax ferrireducens T118] gi|89345615|gb|ABD69818.1| Tetratricopeptide TPR_2 [Rhodoferax ferrireducens T118] Length = 259 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 49/137 (35%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T ++ +E A+ ++ +FS A F + + +P G +L QY+ Sbjct: 131 EFTAEPAEKRDFEAALAVFRKGDFSAAQSVFLEFLKRYPATGYGPSALFWLGNAQYATRD 190 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y++A I + PE + ++ + T+ + + +++ Y Sbjct: 191 YKEAMINFRSLIAREPEHVRAPEAVLSIANCQIEL--------KDTRGARKTLEDLIKAY 242 Query: 170 TNSPYVKGARFYVTVGR 186 S A+ + + Sbjct: 243 PQSEAAIAAKERLPRLK 259 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 38/105 (36%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 ++RY + Y A F++ + Y R Y A+ F+ + Sbjct: 156 AAQSVFLEFLKRYPATGYGPSALFWLGNAQ-------------YATRD-YKEAMINFRSL 201 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +A + A EA+ + + L AR+ + + + YPQ Sbjct: 202 IAREPEHVRAPEAVLSIANCQIELKDTRGARKTLEDLIKAYPQSE 246 Score = 35.1 bits (80), Expect = 9.9, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 45/124 (36%), Gaps = 4/124 (3%) Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 L G+ Q++RDV QR K Q ++ + ++ + R ++ E Sbjct: 88 LRGL-NEQLVRDVAELQRQQKDTAQGVNDRLRQFEPTKVTVDGRE---FTAEPAEKRDFE 143 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 ++G++ AA F L Y + A+ L A A EA + Sbjct: 144 AALAVFRKGDFSAAQSVFLEFLKRYPATGYGPSALFWLGNAQYATRDYKEAMINFRSLIA 203 Query: 256 RYPQ 259 R P+ Sbjct: 204 REPE 207 >gi|227356661|ref|ZP_03841047.1| YbgF protein [Proteus mirabilis ATCC 29906] gi|227163169|gb|EEI48100.1| YbgF protein [Proteus mirabilis ATCC 29906] Length = 247 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 9/126 (7%) Query: 61 YEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ L +++ KA N + +P + + + Y G QAAS Sbjct: 130 YNAAIDIVLNSKDYDKAIVALNNFIKSYPKSSYQSNAQFWLGQMYYLKGNKDQAASTFAI 189 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S+ +Y +G+ + ++ ++V++Y NS K A+ Sbjct: 190 VVKNYPKSQKASEAFYKIGL--------IMQEKGQKDNAKAIYQQVVKQYPNSAGAKLAQ 241 Query: 180 FYVTVG 185 + Sbjct: 242 KQLAAL 247 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 50/129 (38%), Gaps = 14/129 (10%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + D+ + + + ++ ++ Y S Y A+F++ Y Sbjct: 128 ADYNAAIDIVLNSKDYDKAIVALNNFIKSYPKSSYQSNAQFWLGQM-------------Y 174 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YLK + AA F +V+ NY ++ A EA ++ D A+ + + ++YP Sbjct: 175 YLKGNKDQAAST-FAIVVKNYPKSQKASEAFYKIGLIMQEKGQKDNAKAIYQQVVKQYPN 233 Query: 260 GYWARYVET 268 A+ + Sbjct: 234 SAGAKLAQK 242 >gi|313673764|ref|YP_004051875.1| tetratricopeptide tpr_1 repeat-containing protein [Calditerrivibrio nitroreducens DSM 19672] gi|312940520|gb|ADR19712.1| Tetratricopeptide TPR_1 repeat-containing protein [Calditerrivibrio nitroreducens DSM 19672] Length = 863 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 60/158 (37%), Gaps = 18/158 (11%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + Y+ +L ++ I + P K + ++ G+SY ++ ++ +A Sbjct: 149 FKDKDYEAVITLADKLIEKNPLDKYGEEALFIQGLSYLELGKESD---KALFSAASTFDE 205 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + ++ S + A + +L K AI +Q ++ N D + Sbjct: 206 FIRKFPRSKLLPEAMLKSAETKEKLG----------FKNE----AIFVYQEMIKNVKDEK 251 Query: 225 HAEEAMARLVEAYVALALMDEAREVVS-LIQERYPQGY 261 + A ++ E + L D+A + + +Q+ P+ Sbjct: 252 YLNIAYTKIGELFSELGQPDKALKYFTDYLQKTKPENS 289 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 65/198 (32%), Gaps = 40/198 (20%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS---------YAQMIRDVPYD 151 A+ Y G+ +++A L + I + ++V Y++ ++ + + D Sbjct: 654 AYALYMVGEKEKSAQLIKS-IKL--VNDETEFVRYMLNITPNRFNINNYNEDQFQKIISD 710 Query: 152 QRATK--LMLQYMSRIVERYTNSPYVK-------GARFYVTVGRNQL---------AAKE 193 R T Q + + N L K Sbjct: 711 LRKTNSLKAYQLSLDYSRNKPLGIKSAIDILENMDSADKMVNLDNFLKIIEKQPDNIKKS 770 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANY--------SDAEHAEEAMARLVEAYVALALMDE 245 R Y K E V +Q + NY D + EA+ L ++Y+A D Sbjct: 771 AY--RLYFKSAENVFISKNYQNAIKNYLNYIKYAPKDDPNHPEALYFLGKSYIATGDNDL 828 Query: 246 AREVVSLIQERYPQGYWA 263 A + ++ + +R+P +A Sbjct: 829 ALKYLTDLTKRFPNNQYA 846 Score = 42.8 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 79/269 (29%), Gaps = 58/269 (21%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 D ++ + K++++ ++ P ++L + Sbjct: 128 VEDQTYKNEESEKLLTQLKNKFKDKDYEAVITLADKLIEKNPLDKYGEEALFIQGLSYLE 187 Query: 107 AGK-----YQQAASLGEEYITQYPESKNVDYVY-------------------YLVGMSY- 141 GK AAS +E+I ++P SK + Y + Sbjct: 188 LGKESDKALFSAASTFDEFIRKFPRSKLLPEAMLKSAETKEKLGFKNEAIFVYQEMIKNV 247 Query: 142 ---------AQMIRDVPYDQRATKLMLQYMSRIVER----------YTNSPYVKGARFYV 182 I ++ + L+Y + +++ Y S Y + Sbjct: 248 KDEKYLNIAYTKIGELFSELGQPDKALKYFTDYLQKTKPENSPIYGYVGSIYAQKGD--F 305 Query: 183 TVGRNQLAAKE------------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 + + + + Y +G+ AA+ F Y D + + AM Sbjct: 306 EKASDFFSKYKPKKIDEITPSTLYWMAVTYEHKGDEDAALKLFTTFYNKYQDNNYTDMAM 365 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQ 259 + E + D A +++ + ++PQ Sbjct: 366 YKSGEILLKKGKNDIALDILKDAKNKFPQ 394 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 9/83 (10%) Query: 105 YSAGKYQQAASLGEEYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + + YQ A YI P + N Y +G SY I D L L+Y++ Sbjct: 783 FISKNYQNAIKNYLNYIKYAPKDDPNHPEALYFLGKSY---IATGDND-----LALKYLT 834 Query: 164 RIVERYTNSPYVKGARFYVTVGR 186 + +R+ N+ Y A++ + + Sbjct: 835 DLTKRFPNNQYATLAKYEIEDIK 857 Score = 38.6 bits (89), Expect = 0.92, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 78/210 (37%), Gaps = 26/210 (12%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-------LMSAFVQYSA 107 + + ++ A + + + ++A Y ++ +FP ++L Y Sbjct: 478 KKEEIIFNLASEYFGKGDMAQASTYIDRLINEFPKTKYLAEALKLKEEMEYSRIKSLYDN 537 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGM---SYAQMIRDVPYDQRATKLMLQYMSR 164 KY A E+Y+T ++ + +Y + + I + D L + Sbjct: 538 KKYADALKNIEKYLTSN-KNPILRDKWYQ--LWEDIFFAYINSLKSDPIKFGL---NARQ 591 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + + NS V + +T +N E E LK +Y I +Q N +D + Sbjct: 592 FITLFPNSKRVAELKDQIT--KNL--QNEFESI---LKTNDYYTIIVFYQ---KNRNDLD 641 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +++ + + AL ++ E + LI+ Sbjct: 642 RSDKREYYISKVAYALYMVGEKEKSAQLIK 671 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 7/54 (12%), Positives = 19/54 (35%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 D + +Y ++ + A +Y ++ FP A + +++ Sbjct: 806 DPNHPEALYFLGKSYIATGDNDLALKYLTDLTKRFPNNQYATLAKYEIEDIKWK 859 >gi|256830595|ref|YP_003159323.1| N-acetylmuramoyl-L-alanine amidase [Desulfomicrobium baculatum DSM 4028] gi|256579771|gb|ACU90907.1| N-acetylmuramoyl-L-alanine amidase [Desulfomicrobium baculatum DSM 4028] Length = 644 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 20/170 (11%), Positives = 52/170 (30%), Gaps = 16/170 (9%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 +L I ++A+ +S + + + L+ + + + F + Sbjct: 6 SLGIVLTLALVLGFACTALASAKSEYTRGV-SAFNSLLANEKRSGLRTE-WEAVMKPFLR 63 Query: 83 CSRDFPFAGVARKSLLMSAFVQ-------YSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 P + A +S+ +S +A + + YP+ D + Sbjct: 64 AVGADPKSEYAPRSMFFLGRCYEELARRSFSRTDRLKALEAYDRMLAVYPKHGWADDALF 123 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 +G+ + + +D + + ++ Y V AR + Sbjct: 124 RMGLVWLEQFKDPVR-------ASKVFTAVLNDYPKGDKVPEARERLAQI 166 Score = 38.9 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 40/111 (36%), Gaps = 14/111 (12%) Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 P+S+ + +G Y ++ R + + L+ R++ Y + A F + + Sbjct: 69 PKSEYAPRSMFFLGRCYEELARR-SFSRTDRLKALEAYDRMLAVYPKHGWADDALFRMGL 127 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + + + V A F VL +Y + EA RL + Sbjct: 128 V-------------WLEQFKDPVRASKVFTAVLNDYPKGDKVPEARERLAQ 165 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 49/131 (37%), Gaps = 11/131 (8%) Query: 135 YLVGMSYAQMI---RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Y G+S + + + +++ R V S Y + F++ +LA Sbjct: 31 YTRGVSAFNSLLANEKRSGLRTEWEAVMKPFLRAVGADPKSEYAPRSMFFLGRCYEELAR 90 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VALALMDEAREVV 250 + R + + A+ + +LA Y A++A+ R+ + A +V Sbjct: 91 RSFS-------RTDRLKALEAYDRMLAVYPKHGWADDALFRMGLVWLEQFKDPVRASKVF 143 Query: 251 SLIQERYPQGY 261 + + YP+G Sbjct: 144 TAVLNDYPKGD 154 >gi|317491199|ref|ZP_07949635.1| tol-pal system protein YbgF [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920746|gb|EFV42069.1| tol-pal system protein YbgF [Enterobacteriaceae bacterium 9_2_54FAA] Length = 267 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 9/126 (7%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y +AV L ++ +A F + +P + + + Y+ GK +A Sbjct: 150 YNRAVDLVLVKKQNDQAITAFQSFVKQYPDSTYQPNANYWLGQLFYNKGKKDDSAYYFAV 209 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S Y VG+ + ++ +++++Y S K A+ Sbjct: 210 VVKNYPKSPKAPEAMYKVGV--------IMQEKGQVDKAKAVYQQVIKQYPTSDSAKQAQ 261 Query: 180 FYVTVG 185 + Sbjct: 262 KRIAAL 267 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 50/131 (38%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + D+ ++ + V++Y +S Y A +++ Sbjct: 146 ANTDYNRAVDLVLVKKQNDQAITAFQSFVKQYPDSTYQPNANYWLGQL------------ 193 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +Y K + +A F +V+ NY + A EAM ++ +D+A+ V + ++Y Sbjct: 194 -FYNKGKKDDSA-YYFAVVVKNYPKSPKAPEAMYKVGVIMQEKGQVDKAKAVYQQVIKQY 251 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 252 PTSDSAKQAQK 262 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 22/127 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 + QA + + ++ QYP+S Y +G + + Y + +V+ Sbjct: 161 KQNDQAITAFQSFVKQYPDSTYQPNANYWLGQLFYNKGKKDD--------SAYYFAVVVK 212 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SP A + V V ++G+ A +Q V+ Y ++ A+ Sbjct: 213 NYPKSPKAPEAMYKVGVIMQ--------------EKGQVDKAKAVYQQVIKQYPTSDSAK 258 Query: 228 EAMARLV 234 +A R+ Sbjct: 259 QAQKRIA 265 Score = 39.3 bits (91), Expect = 0.56, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 1/89 (1%) Query: 47 YLDSVTDVRY-QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 ++ D Y Y LF + + YF +++P + A +++ + Sbjct: 173 FVKQYPDSTYQPNANYWLGQLFYNKGKKDDSAYYFAVVVKNYPKSPKAPEAMYKVGVIMQ 232 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVY 134 G+ +A ++ ++ I QYP S + Sbjct: 233 EKGQVDKAKAVYQQVIKQYPTSDSAKQAQ 261 >gi|197284483|ref|YP_002150355.1| hypothetical protein PMI0586 [Proteus mirabilis HI4320] gi|194681970|emb|CAR41404.1| putative exported protein [Proteus mirabilis HI4320] Length = 257 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 9/126 (7%) Query: 61 YEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ L +++ KA N + +P + + + Y G QAAS Sbjct: 140 YNAAIDIVLNSKDYDKAIVALNNFIKSYPKSSYQSNAQFWLGQMYYLKGNKDQAASTFAI 199 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S+ +Y +G+ + ++ ++V++Y NS K A+ Sbjct: 200 VVKNYPKSQKASEAFYKIGL--------IMQEKGQKDNAKAIYQQVVKQYPNSAGAKLAQ 251 Query: 180 FYVTVG 185 + Sbjct: 252 KQLAAL 257 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 50/129 (38%), Gaps = 14/129 (10%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + D+ + + + ++ ++ Y S Y A+F++ Y Sbjct: 138 ADYNAAIDIVLNSKDYDKAIVALNNFIKSYPKSSYQSNAQFWLGQM-------------Y 184 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YLK + AA F +V+ NY ++ A EA ++ D A+ + + ++YP Sbjct: 185 YLKGNKDQAAST-FAIVVKNYPKSQKASEAFYKIGLIMQEKGQKDNAKAIYQQVVKQYPN 243 Query: 260 GYWARYVET 268 A+ + Sbjct: 244 SAGAKLAQK 252 >gi|119510384|ref|ZP_01629518.1| Serine/Threonine protein kinase with TPR repeats [Nodularia spumigena CCY9414] gi|119464913|gb|EAW45816.1| Serine/Threonine protein kinase with TPR repeats [Nodularia spumigena CCY9414] Length = 671 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 78/254 (30%), Gaps = 75/254 (29%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFN---QCSRD------------FPFAGVAR-------- 94 ++Y++ + + N+ A E F + + + Sbjct: 314 EKLYQEGLKKYQAGNYQAAVENFTQAIALDSENASAYNKRGNAFYQLGDYQQAKADTTKA 373 Query: 95 --------KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 + F Y GKY++A S + I + Y YY G++ QM Sbjct: 374 IELNPQNANAYYDRGFALYELGKYKEAISDYTKAIELNSGN---AYAYYGRGLALVQM-- 428 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL-----AAKEVEI----- 196 + + + S + N Y+ A + R +L A ++ + Sbjct: 429 ------QENRDANEDFSTAIRLQPN--YI-EAYLQRGILRRRLKIYRTANQDFDAIIKIN 479 Query: 197 ---GRYYLKRG--------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA--LALM 243 R Y ++G +Y AAI + + + A+A L + L Sbjct: 480 PDDARPYYQKGLIQASNNQKY-AAIKEYTQAINRNPNY-----AVAYLRRGNMHSELGYK 533 Query: 244 DEA-REVVSLIQER 256 EA + ++Q Sbjct: 534 LEATEDYNRVLQLN 547 >gi|293651727|pdb|2WQH|A Chain A, Crystal Structure Of Ctpr3y3 Length = 125 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 45/117 (38%), Gaps = 14/117 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + K+ ++ +A EY+ + +P ++ Y G Y +A ++ Sbjct: 13 YNLGNAYYKQGDYDEAIEYYQKALELYPNNA---EAWYNLGNAYYKQGDYDEAIEYYQKA 69 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + YP + +Y +G +Y + Q ++Y + +E Y N+ K Sbjct: 70 LELYPNN---AEAWYNLGNAYYK--------QGDYDEAIEYYQKALELYPNNAEAKQ 115 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 46/130 (35%), Gaps = 28/130 (21%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + ++ Y G Y +A ++ + YP + +Y +G +Y + Q Sbjct: 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNN---AEAWYNLGNAYYK--------Q 56 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 ++Y + +E Y N+ +G Y K+G+Y AI Sbjct: 57 GDYDEAIEYYQKALELYPNNAEAW-----------------YNLGNAYYKQGDYDEAIEY 99 Query: 213 FQLVLANYSD 222 +Q L Y + Sbjct: 100 YQKALELYPN 109 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 32/136 (23%), Positives = 47/136 (34%), Gaps = 28/136 (20%) Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 N +Y +G +Y + Q ++Y + +E Y N+ Sbjct: 7 NSAEAWYNLGNAYYK--------QGDYDEAIEYYQKALELYPNNAEAW------------ 46 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +G Y K+G+Y AI +Q L Y + EA L AY DEA E Sbjct: 47 -----YNLGNAYYKQGDYDEAIEYYQKALELYPN---NAEAWYNLGNAYYKQGDYDEAIE 98 Query: 249 VVSLIQERYPQGYWAR 264 E YP A+ Sbjct: 99 YYQKALELYPNNAEAK 114 >gi|294637419|ref|ZP_06715710.1| putative tol-pal system protein YbgF [Edwardsiella tarda ATCC 23685] gi|291089412|gb|EFE21973.1| putative tol-pal system protein YbgF [Edwardsiella tarda ATCC 23685] Length = 252 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 9/123 (7%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y +AV L ++ +A F + +P + + + YS GK AA Sbjct: 137 YNRAVDLVLVKKQNDQAISAFQTFIKQYPDSTYQPNANYWLGQLYYSKGKKDDAAYYYAV 196 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S Y VG+ + ++ + +++++Y NS K A+ Sbjct: 197 VVKNYPKSPKAPESMYKVGV--------IMQEKGQSDKAHAVFQQVLKQYPNSEAAKLAQ 248 Query: 180 FYV 182 + Sbjct: 249 KRL 251 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 49/131 (37%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + D+ ++ + +++Y +S Y A +++ G Sbjct: 133 ANTDYNRAVDLVLVKKQNDQAISAFQTFIKQYPDSTYQPNANYWL--------------G 178 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + Y +G+ A + +V+ NY + A E+M ++ D+A V + ++Y Sbjct: 179 QLYYSKGKKDDAAYYYAVVVKNYPKSPKAPESMYKVGVIMQEKGQSDKAHAVFQQVLKQY 238 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 239 PNSEAAKLAQK 249 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 47/126 (37%), Gaps = 22/126 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 + QA S + +I QYP+S Y +G Y + Y + +V+ Sbjct: 148 KQNDQAISAFQTFIKQYPDSTYQPNANYWLGQLYYSKGKKDD--------AAYYYAVVVK 199 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SP + + V V ++G+ A FQ VL Y ++E A+ Sbjct: 200 NYPKSPKAPESMYKVGVIMQ--------------EKGQSDKAHAVFQQVLKQYPNSEAAK 245 Query: 228 EAMARL 233 A RL Sbjct: 246 LAQKRL 251 >gi|320105078|ref|YP_004180669.1| tetratricopeptide repeat-containing protein [Isosphaera pallida ATCC 43644] gi|319752360|gb|ADV64120.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera pallida ATCC 43644] Length = 500 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 49/138 (35%), Gaps = 31/138 (22%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV--------QYSAGKYQQAASLGEEYIT 122 ++ +A Y+ Q ++P + A ++ L + Y ++ +L ++ T Sbjct: 334 GSYDEAARYYTQVVTEYPKSPEALRARLDAIDAKLKAYVGPNYDGQHLEECKTLIRQFQT 393 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ---------------YMSRIVE 167 P+ ++ Y + I+ DQ A + L+ I Sbjct: 394 LAPDQPEINAALY-RAL---DQIK----DQEAQRAFLRGEYYMSIGKVTSAEYMFGSIPR 445 Query: 168 RYTNSPYVKGARFYVTVG 185 ++ S YV+ AR + + Sbjct: 446 KWPQSRYVEPARERLEIL 463 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 61/164 (37%), Gaps = 11/164 (6%) Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + + P +A ++ L+ A S G Y +AA + +T+YP+S L Sbjct: 303 VQLLERIRHHDPQGPLAPRAALLIADYYASIGSYDEAARYYTQVVTEYPKSPEA-----L 357 Query: 137 VGM-----SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY-VTVGRNQLA 190 + + YD + + + + + P + A + + ++Q A Sbjct: 358 RARLDAIDAKLKAYVGPNYDGQHLEECKTLIRQFQTLAPDQPEINAALYRALDQIKDQEA 417 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 + G YY+ G+ +A F + + + + E A RL Sbjct: 418 QRAFLRGEYYMSIGKVTSAEYMFGSIPRKWPQSRYVEPARERLE 461 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 58/199 (29%), Gaps = 54/199 (27%) Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD------YVY--YL 136 R + + VQ+ G++ A ++ I YP ++++D Y Y Sbjct: 161 RRYENTSWGEAAQFKLGLVQFRRGRFTAARDSFDKAIKTYPGTRHLDVILAHQYALGEYW 220 Query: 137 VGMSYAQMIRD----------VPYDQRATKLMLQYMS-----RIVE----RYTNS-PYVK 176 + M+ ++ + +D + T L S R+V+ S Sbjct: 221 LKMASPELAQGRIVDPETSPLRQFDDKLTTAALTSASTTADGRVVKLARANDPASYQIPL 280 Query: 177 GARFYVTVGRNQL-----AAK---------------------EVEIGRYYLKRGEYVAAI 210 ++ + +L + I YY G Y A Sbjct: 281 DKPSWIDRLKGRLPLVDSGGHGVQLLERIRHHDPQGPLAPRAALLIADYYASIGSYDEAA 340 Query: 211 PRFQLVLANYSDAEHAEEA 229 + V+ Y + A A Sbjct: 341 RYYTQVVTEYPKSPEALRA 359 >gi|42523572|ref|NP_968952.1| hypothetical protein Bd2102 [Bdellovibrio bacteriovorus HD100] gi|39575778|emb|CAE79945.1| conserved hypothetical protein with TRP repeat [Bdellovibrio bacteriovorus HD100] Length = 224 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 47/121 (38%), Gaps = 8/121 (6%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +YEK + Q + +A F Q +P + + ++ A + Y+ + +E Sbjct: 106 IYEKGKRYFNGQQYDRAIREFGQLLEKYPLSQHSVEARFFIAESYFLKKDYRSSLGQIDE 165 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +TQYP+ ++ +G I ++ T+ + + + + N K AR Sbjct: 166 MVTQYPQHDLTGFILLRMG-----QISEIN---SQTEEAAEIYKTVAKNFKNENLKKQAR 217 Query: 180 F 180 Sbjct: 218 K 218 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 47/139 (33%), Gaps = 22/139 (15%) Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 Y G Y YD+ ++ +++E+Y S + AR Sbjct: 105 AIYEKGKRYFN---GQQYDR-----AIREFGQLLEKYPLSQHSVEAR------------- 143 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 I Y + +Y +++ + ++ Y + + R+ + + +EA E+ Sbjct: 144 -FFIAESYFLKKDYRSSLGQIDEMVTQYPQHDLTGFILLRMGQISEINSQTEEAAEIYKT 202 Query: 253 IQERYPQGYWARYVETLVK 271 + + + + L + Sbjct: 203 VAKNFKNENLKKQARKLAQ 221 >gi|124514219|gb|EAY55734.1| putative TPR-domain containing protein [Leptospirillum rubarum] Length = 274 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 8/116 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 +Y +A+ + ++ + + F Q +P + +A + +++ Y +A Sbjct: 150 PSADILYRQAMNDYQTGHYQLSKKEFGQVVSLYPQSHLASSAEFWVGQSEFNMKHYDKAV 209 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 S + I YP+S Y+ +G SY + + K + R++E + Sbjct: 210 SSFLQVIKNYPDSPKRAVAYFKLGRSYESLGKK--------KDAIHSYRRVLELFP 257 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 44/134 (32%), Gaps = 25/134 (18%) Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 P S ++ Y M+ Q +L + ++V Y S A Sbjct: 149 PPSADI---LYRQAMNDYQT--------GHYQLSKKEFGQVVSLYPQSHLASSA------ 191 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 E +G+ Y A+ F V+ NY D+ A +L +Y +L Sbjct: 192 --------EFWVGQSEFNMKHYDKAVSSFLQVIKNYPDSPKRAVAYFKLGRSYESLGKKK 243 Query: 245 EAREVVSLIQERYP 258 +A + E +P Sbjct: 244 DAIHSYRRVLELFP 257 Score = 42.4 bits (99), Expect = 0.066, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 22/124 (17%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G YQ + + ++ YP+S + VG S M + + + Sbjct: 163 YQTGHYQLSKKEFGQVVSLYPQSHLASSAEFWVGQSEFNM--------KHYDKAVSSFLQ 214 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +++ Y +SP A F + GR Y G+ AI ++ VL + Sbjct: 215 VIKNYPDSPKRAVAYFKL--------------GRSYESLGKKKDAIHSYRRVLELFPLER 260 Query: 225 HAEE 228 +E Sbjct: 261 QLDE 264 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 24/68 (35%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 +++ KA F Q +++P + + S GK + A + Sbjct: 196 GQSEFNMKHYDKAVSSFLQVIKNYPDSPKRAVAYFKLGRSYESLGKKKDAIHSYRRVLEL 255 Query: 124 YPESKNVD 131 +P + +D Sbjct: 256 FPLERQLD 263 >gi|206561549|ref|YP_002232314.1| hypothetical protein BCAL3205 [Burkholderia cenocepacia J2315] gi|198037591|emb|CAR53529.1| putative exported protein [Burkholderia cenocepacia J2315] Length = 249 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T + + A + NF A F +P + + QY+ Sbjct: 121 EGTVQPGETDALSAAQQQFRNGNFKAAAASFRAFIAKYPQSPYQPTAQYWYGNAQYALRD 180 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ + + + ++++P+ +G + Q+A + ++V +Y Sbjct: 181 YRGSTATWQGIVSKFPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFEQVVSQY 232 Query: 170 TNSPYVKGARFYVTVGR 186 S + A+ + + Sbjct: 233 AGSNAAQTAQGKLETIK 249 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 36/109 (33%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y SPY A+++ +Y L+ +Y + Sbjct: 142 GNFKAAAASFRAFIAKYPQSPYQPTAQYW------------YGNAQYALR--DYRGSTAT 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q +++ + A +A+ + + A++ + +Y Sbjct: 188 WQGIVSKFPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 236 >gi|150024618|ref|YP_001295444.1| TPR domain-containing protein [Flavobacterium psychrophilum JIP02/86] gi|149771159|emb|CAL42626.1| TPR-domain containing protein [Flavobacterium psychrophilum JIP02/86] Length = 1003 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 77/222 (34%), Gaps = 37/222 (16%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-------KSLLM 99 Y ++ V + Y A K + + +A +F + + V++ + L Sbjct: 491 YPEAKETVEFANVNYNMAYSHFKLKEYEQAGNFFQK------YIEVSKDDKTRLTDAYLR 544 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 A ++ +Y A ++ I ++ + DY + + Y M ++ + Sbjct: 545 LADSKFVTTRYAAALEAYDKAIIL--KTFDADYAAFQKAICYGFMGKN--------DKKI 594 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 ++ ++ Y NS Y A E+ Y E ++I + ++A Sbjct: 595 AGFNQFLKTYPNSQYRDDAL--------------FELANTYTTENETASSIKTYDQLIAE 640 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 S+ + +A+ R Y ++A + +P+ Sbjct: 641 NSNGSYVSKALLRQGLIYYNADKDEQALTKFKKVVANFPKSE 682 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 34/119 (28%), Gaps = 10/119 (8%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 K FNQ + +P + +L A + + + ++ I + V Sbjct: 588 GKNDKKIAGFNQFLKTYPNSQYRDDALFELANTYTTENETASSIKTYDQLIAENSNGSYV 647 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF--YVTVGRN 187 G+ Y +D + L ++V + S A + N Sbjct: 648 SKALLRQGLIYYNADKD--------EQALTKFKKVVANFPKSEEALEAVKTARLIYVDN 698 Score = 42.0 bits (98), Expect = 0.082, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 78/232 (33%), Gaps = 20/232 (8%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 YQ+ + + + + ++ +A F + + + + A +Y + Sbjct: 421 KTAYQKVAFYRGLELFTDGSYKEALAIFKKSIAEQKDPKFSARGTFWKAETEYILNDFTN 480 Query: 113 AASLGEEYITQYPESK----------NVDYVY-----YLVGMSYAQMIRDVPYDQRATKL 157 A ++++ YPE+K N+ Y + Y ++ Q +V D + T+L Sbjct: 481 ALLSFKQFLG-YPEAKETVEFANVNYNMAYSHFKLKEYEQAGNFFQKYIEVSKDDK-TRL 538 Query: 158 MLQYMSRIVERYTNSPYVK--GARFYVTVGRNQLAAKE-VEIGRYYLKRGEYVAAIPRFQ 214 Y+ ++ + Y A + + A + Y G+ I F Sbjct: 539 TDAYLRLADSKFVTTRYAAALEAYDKAIILKTFDADYAAFQKAICYGFMGKNDKKIAGFN 598 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 L Y ++++ ++A+ L Y + + + G + Sbjct: 599 QFLKTYPNSQYRDDALFELANTYTTENETASSIKTYDQLIAENSNGSYVSKA 650 Score = 35.9 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 57/158 (36%), Gaps = 31/158 (19%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++E A + E + + + ++Q + K+LL + Y+A K +QA + Sbjct: 611 DDALFELANTYTTENETASSIKTYDQLIAENSNGSYVSKALLRQGLIYYNADKDEQALTK 670 Query: 117 GEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPYD------- 151 ++ + +P+S+ +Y ++ + + I D D Sbjct: 671 FKKVVANFPKSEEALEAVKTARLIYVDNGKVDEYATWVKSLDFVN-ISDSDLDNDSWEAA 729 Query: 152 -----QRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 Q K + +S ++ + N + A FY+ Sbjct: 730 EKQYLQGNNKQAITNLSSYIKTFPNGIRILKANFYLAE 767 >gi|265984711|ref|ZP_06097446.1| tol-Pal system YbgF [Brucella sp. 83/13] gi|264663303|gb|EEZ33564.1| tol-Pal system YbgF [Brucella sp. 83/13] Length = 488 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 54/135 (40%), Gaps = 8/135 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + S+ + + S+ +Y+ A +L ++ A F + + +P + ++ Sbjct: 344 GIQTGSAANDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEA 403 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 Y G+Y +AA+L + YP+SK + +GM+ +M Sbjct: 404 RFWLGESLYGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------D 455 Query: 157 LMLQYMSRIVERYTN 171 + ++I +RY Sbjct: 456 VACATFAQIPQRYPK 470 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SL +A+ +G Y+ A + E++ +YP + +G S R Sbjct: 366 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 418 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y +S F + + ++ +V + Sbjct: 419 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 461 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY P ARF++ +G Y A Sbjct: 378 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 423 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F +Y D++ A E M +L A + D A + I +RYP+ Sbjct: 424 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 470 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 23/68 (33%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + YL G+Y AA F+ + Y EA L E+ EA + Sbjct: 368 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 427 Query: 254 QERYPQGY 261 Q YP Sbjct: 428 QRDYPDSK 435 >gi|254488580|ref|ZP_05101785.1| tetratricopeptide TPR_2 [Roseobacter sp. GAI101] gi|214045449|gb|EEB86087.1| tetratricopeptide TPR_2 [Roseobacter sp. GAI101] Length = 277 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 49/158 (31%), Gaps = 17/158 (10%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREV-------YEKAVLFLKEQNFSKAYEYFNQC 83 A L G E ++ + E+ +E+A L + +F A + F Sbjct: 121 ATSTLGGGEMPATNTAPIAPAAPSTNTAELAVGEASDFERAKAALADGDFRTAADQFATF 180 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGK-YQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 + +P + ++ L G + A + + P Y +G S Sbjct: 181 NETYPGGPLGSEADLRRGDALRGLGDIREAARAYLASFSAD-PVGPVAPEALYQLGQSLG 239 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + + + + R+ SP+V A+ Sbjct: 240 AL--------GQVQEGCVTLDEVATRFPASPFVPQAQA 269 >gi|254719696|ref|ZP_05181507.1| TPR repeat-containing protein [Brucella sp. 83/13] gi|306837845|ref|ZP_07470707.1| tol-pal system protein YbgF [Brucella sp. NF 2653] gi|306407084|gb|EFM63301.1| tol-pal system protein YbgF [Brucella sp. NF 2653] Length = 484 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 54/135 (40%), Gaps = 8/135 (5%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + S+ + + S+ +Y+ A +L ++ A F + + +P + ++ Sbjct: 340 GIQTGSAANDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEA 399 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 Y G+Y +AA+L + YP+SK + +GM+ +M Sbjct: 400 RFWLGESLYGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------D 451 Query: 157 LMLQYMSRIVERYTN 171 + ++I +RY Sbjct: 452 VACATFAQIPQRYPK 466 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SL +A+ +G Y+ A + E++ +YP + +G S R Sbjct: 362 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 414 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y +S F + + ++ +V + Sbjct: 415 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 457 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY P ARF++ +G Y A Sbjct: 374 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 419 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F +Y D++ A E M +L A + D A + I +RYP+ Sbjct: 420 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 466 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 23/68 (33%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + YL G+Y AA F+ + Y EA L E+ EA + Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423 Query: 254 QERYPQGY 261 Q YP Sbjct: 424 QRDYPDSK 431 >gi|220906220|ref|YP_002481531.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 7425] gi|219862831|gb|ACL43170.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425] Length = 542 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 28/227 (12%), Positives = 65/227 (28%), Gaps = 49/227 (21%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + A+ I +++ + +++ + +A+ ++Q++ A Sbjct: 218 FNLAIPINTFLSLASRTALKGFPVP--VAAPLSNQPTTDNFFLQAIAKYRQQDYRGAIAD 275 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQ-----YSAGKYQQAASLGEEYITQYPESKNVDYVY 134 F++ R P L A+ Y Y+ A + + I P+ +D Y Sbjct: 276 FDRAIRLNP--------QLDLAYSNRGLARYGLQDYRGAVADFDRAIRLNPQ---LDLAY 324 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 Y G++ + + + + + A R +L Sbjct: 325 YNRGLARYGL--------QDYRGARADFDQAIRLNPKD---ADAYNNRGSVRRELQDYRG 373 Query: 195 EIGRY-------------YLKRG-------EYVAAIPRFQLVLANYS 221 + + Y RG +Y A+ F + Sbjct: 374 AVADFDRAIRLNPKFDLAYYNRGITRRKLQDYGGALADFDQAIRLNP 420 Score = 35.5 bits (81), Expect = 7.4, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 37/112 (33%), Gaps = 14/112 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y + + K Q++ A F+Q R P A + FV+Y Y A + ++ Sbjct: 392 YYNRGITRRKLQDYGGALADFDQAIRLNP--RDA-DAYNNRGFVRYGLQDYGGALADFDQ 448 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 I PE ++ V Y + + + + + + Sbjct: 449 AIRLNPEDADI-----------YNNRGFVRYGLQDYRGAIADFDQAIRLQPD 489 >gi|218549685|ref|YP_002383476.1| tol-pal system protein YbgF [Escherichia fergusonii ATCC 35469] gi|218357226|emb|CAQ89861.1| putative RNA binding protein [Escherichia fergusonii ATCC 35469] gi|324114317|gb|EGC08286.1| tol-pal system protein YbgF [Escherichia fergusonii B253] gi|325498075|gb|EGC95934.1| tol-pal system protein YbgF [Escherichia fergusonii ECD227] Length = 263 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F + +P + + + Y+ GK AA Sbjct: 146 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ T +++ +Y S K A+ Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVINKYPGSDGAKQAQ 257 Query: 180 FYVTVG 185 + Sbjct: 258 KRLNAM 263 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 46/131 (35%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + +++Y +S Y+ A +++ G Sbjct: 142 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYLPNANYWL--------------G 187 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 188 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVINKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGSDGAKQAQK 258 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I +YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAIVAFQNFIKKYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V+ Y ++ A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGSDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|157369524|ref|YP_001477513.1| tol-pal system protein YbgF [Serratia proteamaculans 568] gi|157321288|gb|ABV40385.1| Tol-Pal system YbgF [Serratia proteamaculans 568] Length = 266 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 9/124 (7%) Query: 61 YEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y AV L+++ + +A F + +P + + + Y+ GK AA Sbjct: 150 YNAAVSLALEKKQYDQAISAFQSFVKQYPKSTYQPNANYWLGQLFYNKGKKDDAAYYYAV 209 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + Y +S Y VG+ + ++ +++++Y S K A+ Sbjct: 210 VVKNYAKSPKAPDAMYKVGI--------IMQEKGQADKAKAVFQQVIKQYPTSAAAKQAK 261 Query: 180 FYVT 183 V Sbjct: 262 SRVA 265 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 50/129 (38%), Gaps = 14/129 (10%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S + +++ + V++Y S Y A +++ + Sbjct: 148 SDYNAAVSLALEKKQYDQAISAFQSFVKQYPKSTYQPNANYWLGQL-------------F 194 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y K + AA + +V+ NY+ + A +AM ++ D+A+ V + ++YP Sbjct: 195 YNKGKKDDAA-YYYAVVVKNYAKSPKAPDAMYKVGIIMQEKGQADKAKAVFQQVIKQYPT 253 Query: 260 GYWARYVET 268 A+ ++ Sbjct: 254 SAAAKQAKS 262 >gi|107021873|ref|YP_620200.1| hypothetical protein Bcen_0315 [Burkholderia cenocepacia AU 1054] gi|116688821|ref|YP_834444.1| hypothetical protein Bcen2424_0798 [Burkholderia cenocepacia HI2424] gi|170732120|ref|YP_001764067.1| tol-pal system protein YbgF [Burkholderia cenocepacia MC0-3] gi|105892062|gb|ABF75227.1| conserved hypothetical protein [Burkholderia cenocepacia AU 1054] gi|116646910|gb|ABK07551.1| conserved hypothetical protein [Burkholderia cenocepacia HI2424] gi|169815362|gb|ACA89945.1| tol-pal system protein YbgF [Burkholderia cenocepacia MC0-3] Length = 249 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T + + A + NF A F +P + + QY+ Sbjct: 121 EGTVQPGETDALSAAQQQFRNGNFKAAAASFRAFIAKYPQSPYQPTAQYWYGNAQYALRD 180 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ + + + ++++P+ +G + Q+A + ++V +Y Sbjct: 181 YRGSTATWQGIVSKFPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFEQVVSQY 232 Query: 170 TNSPYVKGARFYVTVGR 186 S + A+ + + Sbjct: 233 AGSNAAQTAQGKLETIK 249 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 36/109 (33%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y SPY A+++ +Y L+ +Y + Sbjct: 142 GNFKAAAASFRAFIAKYPQSPYQPTAQYW------------YGNAQYALR--DYRGSTAT 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q +++ + A +A+ + + A++ + +Y Sbjct: 188 WQGIVSKFPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 236 >gi|260173188|ref|ZP_05759600.1| TPR domain-containing protein [Bacteroides sp. D2] gi|315921462|ref|ZP_07917702.1| TPR domain-containing protein [Bacteroides sp. D2] gi|313695337|gb|EFS32172.1| TPR domain-containing protein [Bacteroides sp. D2] Length = 1005 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 78/206 (37%), Gaps = 31/206 (15%) Query: 44 RDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSR-DFPFAGVA--RKSLLM 99 + + L+ + + Y + +L ++F +A Y++Q + + P + + +L+ Sbjct: 534 KYIQLEKGENTTALADAYNRIGDCYLHVRSFEEAKHYYSQAEQMNTPSGDYSFYQLALVS 593 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y +L + +YP S Y G SY M + + Sbjct: 594 G-----LQKDYSGKITLLNRLVGKYPSSPYAVNAIYEKGRSYVLMDNN--------NQAI 640 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 ++ +Y SP + A EIG Y ++G+Y AI ++ V+ Sbjct: 641 TSFKELLSKYPESPVSRKAAA--------------EIGLLYYQKGDYNQAIGAYKEVIEK 686 Query: 220 YSDAEHAEEAMARLVEAYVALALMDE 245 Y +E A AM L YV L +DE Sbjct: 687 YPGSEEARLAMRDLKSIYVDLNRIDE 712 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 74/214 (34%), Gaps = 28/214 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y + +++++A YF + + +A + +++A Sbjct: 513 YNLGYIAFHRKDYTQASNYFQKYIQLEKGENTTALA-DAYNRIGDCYLHVRSFEEAKHYY 571 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + + + DY +Y + + + ++R+V +Y +SPY Sbjct: 572 SQAEQMN--TPSGDYSFYQLALVSGLQKDYSGK--------ITLLNRLVGKYPSSPYAVN 621 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A E GR Y+ AI F+ +L+ Y ++ + +A A + Y Sbjct: 622 AI--------------YEKGRSYVLMDNNNQAITSFKELLSKYPESPVSRKAAAEIGLLY 667 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++A + E+YP AR +K Sbjct: 668 YQKGDYNQAIGAYKEVIEKYPGSEEARLAMRDLK 701 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 76/267 (28%), Gaps = 55/267 (20%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 +C + D T +Y++ +E+N++ A + P A Sbjct: 9 ICAAICCTPMIGFAQTSDKFTST---DNLYKEGKELFQEKNYAAALPALKAFVKQKPAAS 65 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-------- 143 + + + M A Y + + +Y+ +YP++ + +Y L+ Y Sbjct: 66 LLQDAEYMLASSAYELKDKNR-IEILRKYLDRYPDTPYANRIYALLASCYFYEGKYDEAL 124 Query: 144 ---------MIRDVPYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYV 182 ++ + D + + + Y K +Y+ Sbjct: 125 ALFNSADLGLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYL 182 Query: 183 TVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + R I Y + Y A Q L+ Y + Sbjct: 183 SYIRYTQKRYNEALKGFLPLQDDSKYKALVPYYIAEIYAQLQNYDKAQIVAQNYLSAYPN 242 Query: 223 AEHAEEAMARLVEAYVALALMDEAREV 249 EHA E L +AY +A E Sbjct: 243 NEHAAEMYRILGDAYYHFGQYHQAVEA 269 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 74/210 (35%), Gaps = 16/210 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A ++ + QN+ KA +P A + + Y G+Y QA Y Sbjct: 214 YYIAEIYAQLQNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEAFNNY 273 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR-----ATKLMLQYMSRIVERYTNSPYV 175 + + + D Y++G+SY Q + L + + + Sbjct: 274 LNKDHSAPRRD-ALYMLGLSYYQTKVYSKAAETLGKVTTANDALTQNAYLHMGLSYLQLA 332 Query: 176 KGARFYVTVGRNQLAAKEVEI---GRYYL-------KRGEYVAAIPRFQLVLANYSDAEH 225 + ++ + + ++ ++I Y + ++ F+ L + + + Sbjct: 333 EKSKARMAFEQAAASSANMQIKEQAAYNYALCLHETSFSAFGESVTAFEKFLNEFPTSPY 392 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQE 255 AE+ + LVE Y+ D A + + I + Sbjct: 393 AEKVSSYLVEVYMNTRSYDAALKSIDRIAK 422 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 79/212 (37%), Gaps = 29/212 (13%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--LMSAFVQ 104 Y +S + E+ +L+ ++ ++++A + + +P + AR ++ L S +V Sbjct: 650 YPESPVSRKAAAEI---GLLYYQKGDYNQAIGAYKEVIEKYPGSEEARLAMRDLKSIYVD 706 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + A + P D ++YA + Y + + +++ Sbjct: 707 LNRIDEFAALANAM------PGHIRFD-ANEQDSLTYAAAEK--IYIKGRMEEAKTSLNK 757 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 ++ + + A +Y+ + N+ ++ + L G+ L Y + Sbjct: 758 YLQTFPEGAFSLNAHYYLCLIGNEQKNYDMVL----LHSGK-----------LLEYPNNP 802 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256 AEEA+ E M EA +++E+ Sbjct: 803 FAEEALILRAEVQFNQQNMAEALASYKMLKEK 834 >gi|327393168|dbj|BAK10590.1| TPR domain protein YbgF [Pantoea ananatis AJ13355] Length = 268 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 46/123 (37%), Gaps = 9/123 (7%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y AV L+++ + +A + +P + + + Y+ GK AA Sbjct: 151 YNAAVALILEKKQYDQAIAALQAWVKRYPDSTYQPNANYWLGQLFYNKGKKDDAAYYYAT 210 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + QYP+S VG+ + ++ T ++++ Y ++ K A+ Sbjct: 211 VVKQYPKSPKAAEALLKVGV--------IMQEKNDTAKAKAVYQQVIKLYPDTESAKQAQ 262 Query: 180 FYV 182 + Sbjct: 263 KRL 265 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 22/126 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y QA + + ++ +YP+S Y +G + + Y + +V+ Sbjct: 162 KQYDQAIAALQAWVKRYPDSTYQPNANYWLGQLFYNKGKKDD--------AAYYYATVVK 213 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 +Y SP A V V ++ + A +Q V+ Y D E A+ Sbjct: 214 QYPKSPKAAEALLKVGVIMQ--------------EKNDTAKAKAVYQQVIKLYPDTESAK 259 Query: 228 EAMARL 233 +A RL Sbjct: 260 QAQKRL 265 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 46/131 (35%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 S + +++ + + V+RY +S Y A +++ Sbjct: 147 ANSDYNAAVALILEKKQYDQAIAALQAWVKRYPDSTYQPNANYWLGQL------------ 194 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +Y K + AA + V+ Y + A EA+ ++ +A+ V + + Y Sbjct: 195 -FYNKGKKDDAA-YYYATVVKQYPKSPKAAEALLKVGVIMQEKNDTAKAKAVYQQVIKLY 252 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 253 PDTESAKQAQK 263 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ +Y AI Q + Y D+ + A L + + D+A + + ++YP+ Sbjct: 159 LEKKQYDQAIAALQAWVKRYPDSTYQPNANYWLGQLFYNKGKKDDAAYYYATVVKQYPKS 218 Query: 261 YWARYVETLVK 271 + E L+K Sbjct: 219 --PKAAEALLK 227 >gi|291616742|ref|YP_003519484.1| YbgF [Pantoea ananatis LMG 20103] gi|291151772|gb|ADD76356.1| YbgF [Pantoea ananatis LMG 20103] Length = 268 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 46/123 (37%), Gaps = 9/123 (7%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y AV L+++ + +A + +P + + + Y+ GK AA Sbjct: 151 YNAAVALILEKKQYDQAIAALQAWVKRYPDSTYQPNANYWLGQLFYNKGKKDDAAYYYAT 210 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + QYP+S VG+ + ++ T ++++ Y ++ K A+ Sbjct: 211 VVKQYPKSPKAAEALLKVGV--------IMQEKNDTAKAKAVYQQVIKLYPDTESAKQAQ 262 Query: 180 FYV 182 + Sbjct: 263 KRL 265 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 22/126 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y QA + + ++ +YP+S Y +G + + Y + +V+ Sbjct: 162 KQYDQAIAALQAWVKRYPDSTYQPNANYWLGQLFYNKGKKDD--------AAYYYATVVK 213 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 +Y SP A V V ++ + A +Q V+ Y D E A+ Sbjct: 214 QYPKSPKAAEALLKVGVIMQ--------------EKNDTAKAKAVYQQVIKLYPDTESAK 259 Query: 228 EAMARL 233 +A RL Sbjct: 260 QAQKRL 265 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 46/131 (35%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 S + +++ + + V+RY +S Y A +++ Sbjct: 147 ANSDYNAAVALILEKKQYDQAIAALQAWVKRYPDSTYQPNANYWLGQL------------ 194 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +Y K + AA + V+ Y + A EA+ ++ +A+ V + + Y Sbjct: 195 -FYNKGKKDDAA-YYYATVVKQYPKSPKAAEALLKVGVIMQEKNDTAKAKAVYQQVIKLY 252 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 253 PDTESAKQAQK 263 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ +Y AI Q + Y D+ + A L + + D+A + + ++YP+ Sbjct: 159 LEKKQYDQAIAALQAWVKRYPDSTYQPNANYWLGQLFYNKGKKDDAAYYYATVVKQYPKS 218 Query: 261 YWARYVETLVK 271 + E L+K Sbjct: 219 --PKAAEALLK 227 >gi|332993880|gb|AEF03935.1| tetratricopeptide TPR_2 [Alteromonas sp. SN2] Length = 262 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 47/128 (36%), Gaps = 22/128 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + +Y +A + +I ++P S+ +Y +G + ++ + + Sbjct: 154 KSREYDKAIPAFQSFIQRFPNSEYAPNAHYWLGQLLFNK--------QQWNDAIEQFNIV 205 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 R+++S A + V A + G+ A FQ V++ Y ++ Sbjct: 206 SNRFSDSVKRPDALLKLGVI----AE----------RTGDSSGARNFFQQVISEYPNSSA 251 Query: 226 AEEAMARL 233 A +RL Sbjct: 252 KRLAESRL 259 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 39/116 (33%), Gaps = 14/116 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R + ++R+ NS Y A +++ + ++ AI + Sbjct: 156 REYDKAIPAFQSFIQRFPNSEYAPNAHYWLGQLL--------------FNKQQWNDAIEQ 201 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 F +V +SD+ +A+ +L AR + YP R E+ Sbjct: 202 FNIVSNRFSDSVKRPDALLKLGVIAERTGDSSGARNFFQQVISEYPNSSAKRLAES 257 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 28/67 (41%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y L +Q ++ A E FN S F + +LL + G A + ++ Sbjct: 183 YWLGQLLFNKQQWNDAIEQFNIVSNRFSDSVKRPDALLKLGVIAERTGDSSGARNFFQQV 242 Query: 121 ITQYPES 127 I++YP S Sbjct: 243 ISEYPNS 249 >gi|261214663|ref|ZP_05928944.1| tol-Pal system YbgF [Brucella abortus bv. 3 str. Tulya] gi|260916270|gb|EEX83131.1| tol-Pal system YbgF [Brucella abortus bv. 3 str. Tulya] Length = 488 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 53/136 (38%), Gaps = 8/136 (5%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G + + + + S+ +Y+ A +L ++ A F + + +P + + Sbjct: 343 GGIQTGGAANDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAE 402 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + Y G+Y +AA+L + YP+SK + +GM+ +M Sbjct: 403 ARFWLGESLYGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH-------- 454 Query: 156 KLMLQYMSRIVERYTN 171 + ++I +RY Sbjct: 455 DVACATFAQIPQRYPK 470 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SL +A+ +G Y+ A + E++ +YP + +G S R Sbjct: 366 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 418 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y +S F + + ++ +V + Sbjct: 419 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 461 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY P ARF++ +G Y A Sbjct: 378 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 423 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F +Y D++ A E M +L A + D A + I +RYP+ Sbjct: 424 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 470 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 23/68 (33%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + YL G+Y AA F+ + Y EA L E+ EA + Sbjct: 368 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 427 Query: 254 QERYPQGY 261 Q YP Sbjct: 428 QRDYPDSK 435 >gi|255535140|ref|YP_003095511.1| TPR-domain containing protein [Flavobacteriaceae bacterium 3519-10] gi|255341336|gb|ACU07449.1| TPR-domain containing protein [Flavobacteriaceae bacterium 3519-10] Length = 987 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 77/207 (37%), Gaps = 31/207 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ + K + F++A +YF++ ++ P + L A Y+ + +A ++ ++ Sbjct: 508 YDLGYAYFKSKKFAQAQKYFSEYLKN-PKTEFKNDAELRLADTYYADNQLNEAIAIYDK- 565 Query: 121 ITQYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 ++N D Y + M+ T+ + + ++ +Y +S Y A Sbjct: 566 ------TENADDYTLFQKAMALGFK--------GDTEAKISSLKSLLSKYKSSEYADDAL 611 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 EIG Y ++ A F V+ + SD + A + Y+ Sbjct: 612 --------------YEIGTAYAANEDFTNANDYFSQVIKSSSDQDLVANAQIYRAQNYID 657 Query: 240 LALMDEAREVVSLIQERYPQGYWARYV 266 L ++A + +Y +A V Sbjct: 658 LNQNEKALTEFRALANQYKNTSYAAKV 684 Score = 42.4 bits (99), Expect = 0.061, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 68/211 (32%), Gaps = 40/211 (18%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + NF A +YF + ++ A Y G Y A E + Sbjct: 439 GTEEFNKGNFDAAEKYFLRSLEFNINKEFNTRATYWLAQTYYQKGNYPSAIVRYERIL-- 496 Query: 124 YPESKNVDYVY---YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 ++N Y +G +Y + + +Y S ++ + + A Sbjct: 497 ---NENFAEKQQLTYDLGYAYFKS--------KKFAQAQKYFSEYLKN-PKTEFKNDAEL 544 Query: 181 YVT---VGRNQLAAKEVEIGRY-----------YLK------RGEYVAAIPRFQLVLANY 220 + NQL I Y + K +G+ A I + +L+ Y Sbjct: 545 RLADTYYADNQLNE---AIAIYDKTENADDYTLFQKAMALGFKGDTEAKISSLKSLLSKY 601 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVS 251 +E+A++A+ + AY A A + S Sbjct: 602 KSSEYADDALYEIGTAYAANEDFTNANDYFS 632 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 65/226 (28%), Gaps = 33/226 (14%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T+ +++KA+ + + + + A +L + + Sbjct: 566 TENADDYTLFQKAMALGFKGDTEAKISSLKSLLSKYKSSEYADDALYEIGTAYAANEDFT 625 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + I + V +Y + ++ + L + +Y N Sbjct: 626 NANDYFSQVIKSSSDQDLVANAQIYRAQNYIDLNQN--------EKALTEFRALANQYKN 677 Query: 172 SPYVKGARF--YVTVGR-NQLAAKE-------------------VEIGRYYLKRGEYVAA 209 + Y + N +A + + R Y +Y A Sbjct: 678 TSYAAKVVQAARPAFMKTNDIAGYQSFAQSAGVKLDASELDEINLSSARNYYASKDYKNA 737 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 IP ++ L + +A L E+Y A + + ++QE Sbjct: 738 IPLYEKYLTQNPTGDGLFQAQYELGESYYQ---SKNAAKSLLVLQE 780 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 88/266 (33%), Gaps = 58/266 (21%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL----- 97 S+ + S D+ ++Y +A ++ KA F + + A K + Sbjct: 632 SQVIKSSSDQDLVANAQIY-RAQNYIDLNQNEKALTEFRALANQYKNTSYAAKVVQAARP 690 Query: 98 -------------------------------LMSAFVQYSAGKYQQAASLGEEYITQYPE 126 L SA Y++ Y+ A L E+Y+TQ P Sbjct: 691 AFMKTNDIAGYQSFAQSAGVKLDASELDEINLSSARNYYASKDYKNAIPLYEKYLTQNPT 750 Query: 127 SKNVDYVYYLVGMSYAQM---------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + Y +G SY Q +++V Q + Q +RI + Y Sbjct: 751 GDGLFQAQYELGESYYQSKNAAKSLLVLQEVAGVQNDYQQDAQ--TRIAQIYLEQNNTNE 808 Query: 178 ARFYVTVGRNQ-------LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH-AEEA 229 A+ Y+ N A E+ + Y + A LVL+N ++ E+A Sbjct: 809 AKKYLEPLANSANVNVKNFANLELM--KIYADEKNFAQAEKFADLVLSNSKNSPSITEQA 866 Query: 230 MARLVEAYVALALMDEAREVVSLIQE 255 + + EA+ + +++ Sbjct: 867 KVIKARSLMNKGRDTEAKTAYAALEK 892 >gi|254694355|ref|ZP_05156183.1| TPR repeat-containing protein [Brucella abortus bv. 3 str. Tulya] Length = 484 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 53/136 (38%), Gaps = 8/136 (5%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G + + + + S+ +Y+ A +L ++ A F + + +P + + Sbjct: 339 GGIQTGGAANDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAE 398 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + Y G+Y +AA+L + YP+SK + +GM+ +M Sbjct: 399 ARFWLGESLYGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH-------- 450 Query: 156 KLMLQYMSRIVERYTN 171 + ++I +RY Sbjct: 451 DVACATFAQIPQRYPK 466 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SL +A+ +G Y+ A + E++ +YP + +G S R Sbjct: 362 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 414 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y +S F + + ++ +V + Sbjct: 415 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 457 Score = 39.7 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY P ARF++ +G Y A Sbjct: 374 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 419 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F +Y D++ A E M +L A + D A + I +RYP+ Sbjct: 420 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 466 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 23/68 (33%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + YL G+Y AA F+ + Y EA L E+ EA + Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423 Query: 254 QERYPQGY 261 Q YP Sbjct: 424 QRDYPDSK 431 >gi|78065361|ref|YP_368130.1| hypothetical protein Bcep18194_A3887 [Burkholderia sp. 383] gi|77966106|gb|ABB07486.1| conserved hypothetical protein [Burkholderia sp. 383] Length = 249 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 45/137 (32%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T + + A + NF A F +P + + QY+ Sbjct: 121 EGTVQPGETDALSAAQQQFRNGNFKAAAASFRAFIAKYPQSPYQPTAQYWYGNAQYALRD 180 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ + + + ++++P+ +G + Q+A + ++V +Y Sbjct: 181 YRGSTATWQGIVSKFPQHPRAADALVAIG------TNQLEQGQKAA--AKKTFEQVVSQY 232 Query: 170 TNSPYVKGARFYVTVGR 186 S + A+ + + Sbjct: 233 AGSNAAQTAQGKLETIK 249 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 36/109 (33%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y SPY A+++ +Y L+ +Y + Sbjct: 142 GNFKAAAASFRAFIAKYPQSPYQPTAQYW------------YGNAQYALR--DYRGSTAT 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q +++ + A +A+ + + A++ + +Y Sbjct: 188 WQGIVSKFPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSN 236 >gi|323697640|ref|ZP_08109552.1| tol-pal system protein YbgF [Desulfovibrio sp. ND132] gi|323457572|gb|EGB13437.1| tol-pal system protein YbgF [Desulfovibrio desulfuricans ND132] Length = 318 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 40/113 (35%), Gaps = 8/113 (7%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +YEK F A + F+ +P + +L YS Y QA +E Sbjct: 199 LYEKGYAQYNAGAFPAARQTFDDFLARYPKNDLTPNALYWKGETYYSEQDYAQAILAFKE 258 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 ++P+ +GMSY D D + Y+ +VE + S Sbjct: 259 VTGRFPKHDKAAAALLKIGMSY-----DRVGDPDN---AIFYLRALVEDFPKS 303 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 44/129 (34%), Gaps = 22/129 (17%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 +L + QY+AG + A ++++ +YP++ Y G +Y ++ Sbjct: 198 ALYEKGYAQYNAGAFPAARQTFDDFLARYPKNDLTPNALYWKGETYYS--------EQDY 249 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + + R+ A IG Y + G+ AI + Sbjct: 250 AQAILAFKEVTGRFPKHDKAAAALLK--------------IGMSYDRVGDPDNAIFYLRA 295 Query: 216 VLANYSDAE 224 ++ ++ + Sbjct: 296 LVEDFPKSS 304 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 39/129 (30%), Gaps = 22/129 (17%) Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 Y G + A Q + RY + A ++ Sbjct: 198 ALYEKGYAQYNA--------GAFPAARQTFDDFLARYPKNDLTPNALYWK---------- 239 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 G Y +Y AI F+ V + + A A+ ++ +Y + D A + Sbjct: 240 ----GETYYSEQDYAQAILAFKEVTGRFPKHDKAAAALLKIGMSYDRVGDPDNAIFYLRA 295 Query: 253 IQERYPQGY 261 + E +P+ Sbjct: 296 LVEDFPKSS 304 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 4/92 (4%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 RQ+ D + +Y K + EQ++++A F + + FP Sbjct: 209 AGAFPAARQTFDDFLARYPKNDLTPNALYWKGETYYSEQDYAQAILAFKEVTGRFPKHDK 268 Query: 93 ARKSLLMSAFVQYSAGKYQQAA----SLGEEY 120 A +LL G A +L E++ Sbjct: 269 AAAALLKIGMSYDRVGDPDNAIFYLRALVEDF 300 >gi|332878926|ref|ZP_08446641.1| putative tol-pal system protein YbgF [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683277|gb|EGJ56159.1| putative tol-pal system protein YbgF [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 1000 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 73/214 (34%), Gaps = 25/214 (11%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYS 106 + Y + Y A ++++++A F + + P ++L A + Sbjct: 489 PSASKTDEYPKAFYGLAYANFNQRHYAEAIVNFEKYLKQNPKDEDFKHDAMLRLADSYFV 548 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 GKY A + I +S + DY Y +SY + R ++ + R + Sbjct: 549 TGKYWPAMEGYNKLIES--KSADQDYAAYQKAISYGFVDRPNNK--------IEDLERFI 598 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + Y S A E+ G Y+ +G+ + +Q + +Y Sbjct: 599 KNYPTSNLRPNAL------------YEL--GNTYVTQGDTDKGLQYYQQLAKDYKGNALV 644 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 AM R Y +A + I + YP+ Sbjct: 645 PRAMLREGLVYYNRGENQKALSLFKAIAKDYPKT 678 Score = 39.3 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 28/69 (40%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 VTD+ + YE A L + N +A F + + FP + A Y+ GK Sbjct: 712 EVTDLELESATYEAAERQLLQNNNKEAIVAFEKYLQQFPNGMRRTNAEFYLAQALYNTGK 771 Query: 110 YQQAASLGE 118 +A + E Sbjct: 772 KAEALTHYE 780 Score = 38.9 bits (90), Expect = 0.84, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 58/164 (35%), Gaps = 29/164 (17%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 T +YE ++ + + K +Y+ Q ++D+ + +++L V Y+ G+ Sbjct: 602 PTSNLRPNALYELGNTYVTQGDTDKGLQYYQQLAKDYKGNALVPRAMLREGLVYYNRGEN 661 Query: 111 QQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIR------ 146 Q+A SL + YP++ DY + + Y ++ Sbjct: 662 QKALSLFKAIAKDYPKTTEASQAVSSAKLIYVDMGQVNDYAAWAKSLGYVEVTDLELESA 721 Query: 147 -----DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + Q K + + ++++ N A FY+ Sbjct: 722 TYEAAERQLLQNNNKEAIVAFEKYLQQFPNGMRRTNAEFYLAQA 765 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 52/193 (26%), Gaps = 31/193 (16%) Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 E + +++P + + +L + G + ++ Y + V Sbjct: 591 IEDLERFIKNYPTSNLRPNALYELGNTYVTQGDTDKGLQYYQQLAKDYKGNALVPRAMLR 650 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA--RFYVTVG----RNQLA 190 G+ Y + L I + Y + A + N A Sbjct: 651 EGLVYYNR--------GENQKALSLFKAIAKDYPKTTEASQAVSSAKLIYVDMGQVNDYA 702 Query: 191 AKE-----VEIGRYYLKRGEYVAA------------IPRFQLVLANYSDAEHAEEAMARL 233 A VE+ L+ Y AA I F+ L + + A L Sbjct: 703 AWAKSLGYVEVTDLELESATYEAAERQLLQNNNKEAIVAFEKYLQQFPNGMRRTNAEFYL 762 Query: 234 VEAYVALALMDEA 246 +A EA Sbjct: 763 AQALYNTGKKAEA 775 Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 79/247 (31%), Gaps = 53/247 (21%) Query: 50 SVTDVRYQREVYEK-----AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + RE+Y+K V E ++ A Y ++ D + +A ++ +A Sbjct: 412 EKSSDPKDRELYKKVAFYRGVELFNELQYADALTYLDKAIADN--SAIAARAAYWAAEAA 469 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y Y +AA+ +++ SK +Y +Y G++YA ++QR + Sbjct: 470 YQLKNYPKAATYFQQFFANPSASKTDEYPKAFY--GLAYAN------FNQRHYAEAIVNF 521 Query: 163 SRIVERYTNSPYVK-GARFYVTVGRNQLAAKEVEIGRYYLKRG----------------E 205 + +++ K A LA G+Y+ Sbjct: 522 EKYLKQNPKDEDFKHDAMLR-------LADSYFVTGKYWPAMEGYNKLIESKSADQDYAA 574 Query: 206 YVAAIPR------------FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 Y AI + + NY + A+ L YV D+ + + Sbjct: 575 YQKAISYGFVDRPNNKIEDLERFIKNYPTSNLRPNALYELGNTYVTQGDTDKGLQYYQQL 634 Query: 254 QERYPQG 260 + Y Sbjct: 635 AKDYKGN 641 >gi|319900806|ref|YP_004160534.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides helcogenes P 36-108] gi|319415837|gb|ADV42948.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides helcogenes P 36-108] Length = 1010 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 33/80 (41%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + +YEK +++ N +A F + +P + +RK+ + Y Y Sbjct: 622 PSSPYAVNALYEKGRSYVQSNNSHQAIAAFRELLSKYPESPASRKAAAEIGLLYYQNNDY 681 Query: 111 QQAASLGEEYITQYPESKNV 130 +A + ITQYP S+ Sbjct: 682 DRAIEAYKHVITQYPGSEEA 701 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 46/125 (36%), Gaps = 8/125 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A++ +++++ N+ + +P + A +L + QA + E Sbjct: 595 YQLALVAGLQKDYNGKISLLNRLANKYPSSPYAVNALYEKGRSYVQSNNSHQAIAAFREL 654 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +++YPES +G+ Y D ++ ++ +Y S + A Sbjct: 655 LSKYPESPASRKAAAEIGLLYY-QNNDYDR-------AIEAYKHVITQYPGSEEARLAMR 706 Query: 181 YVTVG 185 + Sbjct: 707 DLKSI 711 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 79/249 (31%), Gaps = 51/249 (20%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQC-----SRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 +Y + +A YFN+ R+ + + A++ ++ Y Sbjct: 478 ADALYWLGESCYRLNRMREAARYFNEYLTLTGERN---TEMFALAYYNLAYIAFNQKDYS 534 Query: 112 QAASLGEEYITQ----YPES---------------KNVDYV--YYLVGMS--------YA 142 A +I P + + D YY S Sbjct: 535 TAEGYFRSFIQLEKGKNPTALADACNRIGDCNLHVRRFDEAKRYYTKAESLGTPAGDYSF 594 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + V Q+ + ++R+ +Y +SPY N L K GR Y++ Sbjct: 595 YQLALVAGLQKDYNGKISLLNRLANKYPSSPYA----------VNALYEK----GRSYVQ 640 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 AI F+ +L+ Y ++ + +A A + Y D A E + +YP Sbjct: 641 SNNSHQAIAAFRELLSKYPESPASRKAAAEIGLLYYQNNDYDRAIEAYKHVITQYPGSEE 700 Query: 263 ARYVETLVK 271 AR +K Sbjct: 701 ARLAMRDLK 709 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 79/285 (27%), Gaps = 68/285 (23%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 +K + + +I L+ + S ++ + +Y++ +++ +S A Sbjct: 3 HKISRILCTAICCAPLLATAQTSEKNT---------SAQRLYQEGQSLFQQKAYSAAISP 53 Query: 80 FNQCSRD-------FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 R P G +++ M A Y Q+ ++ +YP++ + + Sbjct: 54 LQTYIRQTDAKGKPLPATGERQEAEYMLACTSYELRN-PQSMERLRTFLEEYPDTPHANR 112 Query: 133 VYYLVGMSYA-----------------QMIRDVPYDQ------------RATKLMLQYMS 163 +Y L+ Y ++ D K + Sbjct: 113 IYALIASIYFFEAKYDDALAMFNSSRLDLLDSEERDDMTYRLATCYLKTGNAKEAAIWFE 172 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKR 203 + R T Y +Y++ R E I YL + Sbjct: 173 TL--RSTGRKYTADCNYYISYIRYIQGRHEEALSGFLPLQDNNKYKALVPYYIAEIYLIK 230 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 Y A Q L+ + + E L A EA Sbjct: 231 KNYDKAEIVAQNYLSAHPGQTYTAEMYRVLGTAEYHSGKFHEAMT 275 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 67/192 (34%), Gaps = 41/192 (21%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 Y +S + E+ +L+ + ++ +A E + +P + AR ++ + Sbjct: 658 YPESPASRKAAAEI---GLLYYQNNDYDRAIEAYKHVITQYPGSEEARLAMRDLKSIYVD 714 Query: 107 AGKYQQAASLGEEY---ITQYPESKN-----VDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A + + A+L + I P ++ Y+ G Sbjct: 715 ANRIDEFAALASQMPGEIRFDPSEQDSLTYMAAEKIYMKG---------------EASSA 759 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++R ++ + N + A +Y+ + KE + + A + +L Sbjct: 760 KNSLTRYLQNFPNGSFSLNAHYYLCII-----GKE---------QKDDEAVLEHAGKLLE 805 Query: 219 NYSDAEHAEEAM 230 Y D ++EEA+ Sbjct: 806 -YPDNTYSEEAL 816 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 79/210 (37%), Gaps = 15/210 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A ++L ++N+ KA P + + +Y +GK+ +A + ++Y Sbjct: 221 YYIAEIYLIKKNYDKAEIVAQNYLSAHPGQTYTAEMYRVLGTAEYHSGKFHEAMTSFDKY 280 Query: 121 ITQYPESKNVDYVYYLVGMSYAQ-----MIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + E+ + Y+ G+S Q + + + + K L + + Sbjct: 281 LEYGTEAIHRRDALYMSGISCYQCGVYSKVPAILGEVTSEKDALSQNAYLHMGLAYLQLA 340 Query: 176 KGARFYVTVGRNQLAAKEVEI---GRYYL----KRGEYVA---AIPRFQLVLANYSDAEH 225 A+ + + + +++I Y Y A ++ F+ L + ++ + Sbjct: 341 DKAKARMAFEQAAASNSDLKIKEQASYNYALCIHETAYSAFGESVTVFEKFLNEFPNSPY 400 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQE 255 A++ + LVE Y+ D A + + I Sbjct: 401 ADKVGSYLVEVYMNTRSYDAALKSIERITH 430 >gi|50120314|ref|YP_049481.1| tol-pal system protein YbgF [Pectobacterium atrosepticum SCRI1043] gi|49610840|emb|CAG74285.1| putative exported protein [Pectobacterium atrosepticum SCRI1043] Length = 258 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 45/135 (33%), Gaps = 9/135 (6%) Query: 50 SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + Y A L+++ + +A F + +P + + + Y+ G Sbjct: 130 APASTGDANSDYNAAAALVLEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKG 189 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 K AA + YP+S VG+ + ++ ++V+ Sbjct: 190 KKDDAAYYFANVVKNYPKSPKSSEALLKVGV--------IMQEKGQADKAKAVYQQVVKM 241 Query: 169 YTNSPYVKGARFYVT 183 Y N+ K A+ + Sbjct: 242 YPNTESAKQAQKRLA 256 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 S + +++ + V++Y +S Y A +++ Sbjct: 137 ANSDYNAAAALVLEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLN----------- 185 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + + EA+ ++ D+A+ V + + Y Sbjct: 186 ---YNKGKKDDAAYYFANVVKNYPKSPKSSEALLKVGVIMQEKGQADKAKAVYQQVVKMY 242 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 243 PNTESAKQAQK 253 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 22/127 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y QA S + ++ +YP+S Y +G + Y + +V+ Sbjct: 152 KQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFANVVK 203 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SP A V V ++G+ A +Q V+ Y + E A+ Sbjct: 204 NYPKSPKSSEALLKVGVIMQ--------------EKGQADKAKAVYQQVVKMYPNTESAK 249 Query: 228 EAMARLV 234 +A RL Sbjct: 250 QAQKRLA 256 Score = 43.6 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ +Y AI FQ + Y D+ + A L + D+A + + + YP+ Sbjct: 149 LEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFANVVKNYPKS 208 Query: 261 YWARYVETLVK 271 + E L+K Sbjct: 209 --PKSSEALLK 217 >gi|161504088|ref|YP_001571200.1| tol-pal system protein YbgF [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865435|gb|ABX22058.1| hypothetical protein SARI_02186 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 262 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 47/156 (30%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F + +P Sbjct: 115 SGAATAASPAPDAGTATSGAPVQSGDANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPD 174 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S Y VG+ + Sbjct: 175 STYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGV--------IM 226 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ +++ +Y + K A+ + Sbjct: 227 QDKGDMAKAKAVYQQVINKYPGTDGAKQAQKRLNAM 262 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + +++Y +S Y A +++ Sbjct: 141 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN----------- 189 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ M +A+ V + +Y Sbjct: 190 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDMAKAKAVYQQVINKY 246 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 247 PGTDGAKQAQK 257 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I +YP+S Y +G + Y + +V+ Y Sbjct: 159 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 210 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A + V V +G+ A +Q V+ Y + A++A Sbjct: 211 KSPKAADAMYKVGVIMQ--------------DKGDMAKAKAVYQQVINKYPGTDGAKQAQ 256 Query: 231 ARL 233 RL Sbjct: 257 KRL 259 >gi|157146632|ref|YP_001453950.1| tol-pal system protein YbgF [Citrobacter koseri ATCC BAA-895] gi|157083837|gb|ABV13515.1| hypothetical protein CKO_02398 [Citrobacter koseri ATCC BAA-895] Length = 262 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 44/126 (34%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F + +P + + + Y+ GK AA Sbjct: 145 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAFYFAS 204 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S Y VG+ + D+ +++ +Y + K A+ Sbjct: 205 VVKNYPKSPKAADAMYKVGV--------IMQDKGDAAKAKAVYQQVISKYPGTDGAKQAQ 256 Query: 180 FYVTVG 185 + Sbjct: 257 KRLNAM 262 Score = 50.1 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + +++Y +S Y A +++ Sbjct: 141 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN----------- 189 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 Y K + AA F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 190 --YNKGKKDDAAFY-FASVVKNYPKSPKAADAMYKVGVIMQDKGDAAKAKAVYQQVISKY 246 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 247 PGTDGAKQAQK 257 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I +YP+S Y +G + Y + +V+ Y Sbjct: 159 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAFYFASVVKNYP 210 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A + V V K A +Q V++ Y + A++A Sbjct: 211 KSPKAADAMYKVGVIMQ-------------DKGDAAKAKAV-YQQVISKYPGTDGAKQAQ 256 Query: 231 ARL 233 RL Sbjct: 257 KRL 259 >gi|299529323|ref|ZP_07042762.1| hypothetical protein CTS44_01083 [Comamonas testosteroni S44] gi|298722701|gb|EFI63619.1| hypothetical protein CTS44_01083 [Comamonas testosteroni S44] Length = 253 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 49/137 (35%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T R +++ +E+A+ + F +A + F R +P +G QY+ Sbjct: 125 EFTADRNEQQEFEQALGMFRSGKFPEAGQAFAAFLRQWPKSGYTPSVRFWLGNSQYATRD 184 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ A + +T P + ++ + TK + + +++ Y Sbjct: 185 YKNAIANFRSVMTNAPMHARAPEAALSIANCLVEL--------KDTKAARKTLEELLQAY 236 Query: 170 TNSPYVKGARFYVTVGR 186 NS A+ + + Sbjct: 237 PNSEAAGIAKSKLATLK 253 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q + + ++ S Y RF++ + Y R Y AI F+ V Sbjct: 150 EAGQAFAAFLRQWPKSGYTPSVRFWLGNSQ-------------YATRD-YKNAIANFRSV 195 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + N A EA + V L AR+ + + + YP Sbjct: 196 MTNAPMHARAPEAALSIANCLVELKDTKAARKTLEELLQAYPNSE 240 Score = 35.5 bits (81), Expect = 7.4, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 22/133 (16%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 + A + +GK+ +A ++ Q+P+S V + +G S D Sbjct: 132 EQQEFEQALGMFRSGKFPEAGQAFAAFLRQWPKSGYTPSVRFWLGNSQY-----ATRD-- 184 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 K + ++ A + +L + AA Sbjct: 185 -YKNAIANFRSVMTNAPMHARAPEAALSIANCLVEL--------------KDTKAARKTL 229 Query: 214 QLVLANYSDAEHA 226 + +L Y ++E A Sbjct: 230 EELLQAYPNSEAA 242 >gi|164688410|ref|ZP_02212438.1| hypothetical protein CLOBAR_02055 [Clostridium bartlettii DSM 16795] gi|164602823|gb|EDQ96288.1| hypothetical protein CLOBAR_02055 [Clostridium bartlettii DSM 16795] Length = 478 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 46/135 (34%), Gaps = 15/135 (11%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMS 100 ++ ++ + +Y A + + ++ A +Y+ + + + ++ Sbjct: 343 KEQEKEATEIAKGAENLYFSANKYKQAGDYKTAIKYYEYSLKANDTY---KFREDAIYNM 399 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLML 159 A G A ++++ Y S N D YY +GM Y + R + Sbjct: 400 ALSYQKLGDDDNAIKYYKKFVNTYKASSNFYDDSYYHLGMLYYKNDR--------LQDAK 451 Query: 160 QYMSRIVERYTNSPY 174 + NSPY Sbjct: 452 NAFYDLRGSDPNSPY 466 Score = 42.4 bits (99), Expect = 0.075, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 25/79 (31%), Gaps = 1/79 (1%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A Y + G+Y AI ++ L + E+A+ + +Y L D A + Sbjct: 356 AENLYFSANKYKQAGDYKTAIKYYEYSLKANDTYKFREDAIYNMALSYQKLGDDDNAIKY 415 Query: 250 VSLIQERYP-QGYWARYVE 267 Y + Sbjct: 416 YKKFVNTYKASSNFYDDSY 434 >gi|228474051|ref|ZP_04058792.1| TPR repeat protein [Capnocytophaga gingivalis ATCC 33624] gi|228274565|gb|EEK13406.1| TPR repeat protein [Capnocytophaga gingivalis ATCC 33624] Length = 996 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 76/214 (35%), Gaps = 24/214 (11%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 L T Y +Y ++ + +A EYF++ + P A + L ++A Sbjct: 489 LKETTLAEYPNALYGLGYALFNQKKYVEAAEYFSKYIQTQPEASRLADANLRLGDSYFAA 548 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 GKY A ++ IT N DY + +SY V + ++ ++ + Sbjct: 549 GKYWPAMEAYDKVITAN--VSNTDYAAFQKAISYGI----VDRVPKK----IEALNAFIT 598 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y S + A E+ Y+ +G+ A ++++ + Y + + Sbjct: 599 HYPKSNLREDAI------------YEL--ANTYVGQGKMEKASELYEMLQSQYQEGTYTA 644 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 AM R +A + I ++YP Sbjct: 645 RAMLREGLMLYNKNENQKALAIFKKITQKYPSSP 678 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 78/253 (30%), Gaps = 61/253 (24%) Query: 54 VRYQREVYEK-----AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 ++Y++ A+ + NF +A YF + + V ++ S Y Sbjct: 415 TSPDPKIYQQVAFLYALQLYGDGNFKEALPYFQKAKNSKAQSQVQARATYWSGETHYQLH 474 Query: 109 KYQQAASLGEEYITQ-------YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 +Y +A ++ YP Y +G + + V +Y Sbjct: 475 EYPEAQRDFSAFLALKETTLAEYPN------ALYGLGYALFNQKKYV--------EAAEY 520 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV------------AA 209 S+ ++ + + A L G+Y+ Y AA Sbjct: 521 FSKYIQTQPEASRLADANLR-------LGDSYFAAGKYWPAMEAYDKVITANVSNTDYAA 573 Query: 210 ----------------IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 I + +Y + E+A+ L YV M++A E+ ++ Sbjct: 574 FQKAISYGIVDRVPKKIEALNAFITHYPKSNLREDAIYELANTYVGQGKMEKASELYEML 633 Query: 254 QERYPQGYWARYV 266 Q +Y +G + Sbjct: 634 QSQYQEGTYTARA 646 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 82/234 (35%), Gaps = 47/234 (20%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + +YE A ++ + KA E + + +++L + Y+ + Sbjct: 601 PKSNLREDAIYELANTYVGQGKMEKASELYEMLQSQYQEGTYTARAMLREGLMLYNKNEN 660 Query: 111 QQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQ----MIRDV 148 Q+A ++ ++ +YP S +Y + + Y + I Sbjct: 661 QKALAIFKKITQKYPSSPEAMQAVSSAKNIYAEMGKMEEYAAWAKALGYVKVSDSEIDSA 720 Query: 149 PYD-------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +D Q + + + ++ Y A E + + Y Sbjct: 721 AFDAAERLYVQNKKQEAKVALEKYLKDYPKGTGASQA--------------EFYLAQIYF 766 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + A+P ++ VLA + E++E+ + RL Y+ ++ +V+ L++E Sbjct: 767 DENQKDKALPLYEKVLAQGRN-EYSEQVLVRLSNIYLE---KEDTDKVLPLLEE 816 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 53/183 (28%), Gaps = 26/183 (14%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + + ++KA Y L F Y G YQ+A I Sbjct: 251 GESYFNLKQYTKAIPYLEAYKGKN--GTYTDTDLYYLGFAYYQQGDYQKAIGQFNRII-- 306 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 +++ YY + Y + + + L + +S K A Sbjct: 307 NGKNQVAQNAYYHLAQCYLKTGQK--------QQALNAFRNAYQMNFSSEIKKDAHLNY- 357 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 A E+G Y + Q + Y + +H +E L+++Y+ Sbjct: 358 ------ARLSYEVG------NAYESTPTVIQAYIDTYPN-DHTQELKELLLDSYITSGNF 404 Query: 244 DEA 246 A Sbjct: 405 PSA 407 >gi|71901733|ref|ZP_00683805.1| TPR repeat [Xylella fastidiosa Ann-1] gi|71728505|gb|EAO30664.1| TPR repeat [Xylella fastidiosa Ann-1] Length = 271 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 21/154 (13%), Positives = 49/154 (31%), Gaps = 10/154 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 + S +V+ D+ E Y A LK ++ A E F + +P + Sbjct: 124 MSEQSPNVHGDASALTISNEERIAYNVAFDALKNSKYADAAELFMSFLKLYPNGVYTPNA 183 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L Y+ + A + +++YP + A ++ Sbjct: 184 LYWLGESYYAMHDFVSAEAQFRTLLSRYPTHDKASGSLLKEALCQANQGKN--------D 235 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 + +++ +Y + + A+ + + A Sbjct: 236 AAQHSLEQVLSQYPGTDAARLAQERLQSMKLSQA 269 Score = 42.0 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + ++ Y N Y A +++ G Y ++V+A +F+ + Sbjct: 162 DAAELFMSFLKLYPNGVYTPNALYWL--------------GESYYAMHDFVSAEAQFRTL 207 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 L+ Y + A ++ + D A+ + + +YP AR + ++ Sbjct: 208 LSRYPTHDKASGSLLKEALCQANQGKNDAAQHSLEQVLSQYPGTDAARLAQERLQ 262 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 23/58 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 LK +Y A F L Y + + A+ L E+Y A+ A + RYP Sbjct: 155 LKNSKYADAAELFMSFLKLYPNGVYTPNALYWLGESYYAMHDFVSAEAQFRTLLSRYP 212 >gi|322379083|ref|ZP_08053486.1| competence lipoprotein [Helicobacter suis HS1] gi|322379947|ref|ZP_08054224.1| competence lipoprotein [Helicobacter suis HS5] gi|321147645|gb|EFX42268.1| competence lipoprotein [Helicobacter suis HS5] gi|321148575|gb|EFX43072.1| competence lipoprotein [Helicobacter suis HS1] Length = 213 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 57/153 (37%), Gaps = 7/153 (4%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N A Y++ + + + +++ ++ A +EYI ++ N+D Sbjct: 45 NLETADNYYSSLQSEHINSPLVPDAMIALGQAHLKKKEFVLAEYYFDEYIKRFGNQSNID 104 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Y+ +L + ++ DQ L ++ V++Y +S ++ + + L Sbjct: 105 YLKFLKLQARYYAFKNHSKDQEFMSNTLGMLNDFVDKYPHSRFLNQVEYM--QVKFILGQ 162 Query: 192 KEVE--IGRYYLKRGEYVAA---IPRFQLVLAN 219 E+ I Y KR + + R VL Sbjct: 163 NELNRAIANVYRKRHQKEGVKRYMERVDEVLEK 195 >gi|254496227|ref|ZP_05109121.1| outer membrane protein [Legionella drancourtii LLAP12] gi|254354532|gb|EET13173.1| outer membrane protein [Legionella drancourtii LLAP12] Length = 319 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 63/150 (42%), Gaps = 25/150 (16%) Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P + + Y ++ +++++ YD L M+ V++Y Y A+++ Sbjct: 193 RTNPADEQISY------LAAYELVKNRRYD-----DALNSMNLFVQKYPRGGYTANAQYW 241 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 + G YL + +Y A+ F +VL ++ + + +M ++ AY A+ Sbjct: 242 L--------------GELYLVKKDYAKAVEHFNVVLQQFATSSKSAASMLKVGYAYDAMG 287 Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271 EA++ + + YP A+ + ++ Sbjct: 288 NKPEAKKYLQQVVRAYPGTPTAQLANSKLQ 317 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 33/70 (47%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y L+L +++++KA E+FN + F + + S+L + + G +A ++ Sbjct: 240 YWLGELYLVKKDYAKAVEHFNVVLQQFATSSKSAASMLKVGYAYDAMGNKPEAKKYLQQV 299 Query: 121 ITQYPESKNV 130 + YP + Sbjct: 300 VRAYPGTPTA 309 Score = 38.6 bits (89), Expect = 0.89, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 42/134 (31%), Gaps = 8/134 (5%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T+ ++ Y A +K + + A N + +P G + + Y Sbjct: 194 TNPADEQISYLAAYELVKNRRYDDALNSMNLFVQKYPRGGYTANAQYWLGELYLVKKDYA 253 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 +A + Q+ S VG +Y M +Y+ ++V Y Sbjct: 254 KAVEHFNVVLQQFATSSKSAASMLKVGYAYDAMGNKP--------EAKKYLQQVVRAYPG 305 Query: 172 SPYVKGARFYVTVG 185 +P + A + Sbjct: 306 TPTAQLANSKLQTI 319 >gi|237748797|ref|ZP_04579277.1| tol-Pal cell envelope complex subunit YbgF [Oxalobacter formigenes OXCC13] gi|229380159|gb|EEO30250.1| tol-Pal cell envelope complex subunit YbgF [Oxalobacter formigenes OXCC13] Length = 244 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 41/137 (29%), Gaps = 8/137 (5%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 T + Y A K ++ A +N + +P + + + Y G Sbjct: 116 KESTADSNENAAYATAEDKFKAGDYKGAVSAYNSFLKQYPKSNLIASAQYQLGNAYYLQG 175 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 Y+ A + +YP+++ + + + +S + + Sbjct: 176 DYKNALKQQSAVVKRYPKNQVTPDAMLNMASCQIGLNDIAG--------AKKTLSELARK 227 Query: 169 YTNSPYVKGARFYVTVG 185 Y S K A+ + Sbjct: 228 YPKSGAAKKAKERLVQL 244 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 51/120 (42%), Gaps = 15/120 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + + +++Y S N +A+ + ++G Y +G+Y A+ + Sbjct: 138 GDYKGAVSAYNSFLKQYPKS--------------NLIASAQYQLGNAYYLQGDYKNALKQ 183 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV-ETLVK 271 V+ Y + +AM + + L + A++ +S + +YP+ A+ E LV+ Sbjct: 184 QSAVVKRYPKNQVTPDAMLNMASCQIGLNDIAGAKKTLSELARKYPKSGAAKKAKERLVQ 243 >gi|126662007|ref|ZP_01733006.1| TPR-domain containing protein [Flavobacteria bacterium BAL38] gi|126625386|gb|EAZ96075.1| TPR-domain containing protein [Flavobacteria bacterium BAL38] Length = 1003 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 68/208 (32%), Gaps = 37/208 (17%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-------SLLMSAFVQYSAGKYQQA 113 Y A + K + + A EYF+ F+ + + L + A KY A Sbjct: 504 YNLAYSYFKLKEYESAIEYFDS------FSKSVKDDKIRLTDAYLRLGDCNFMAAKYWPA 557 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + I +S + DY + G+SY + ++ + + + Y S Sbjct: 558 MDAYNKAIDM--KSVDADYAAFQKGISYG-FVSKPDRK-------IEDLEKFAKTYPTSQ 607 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y A E+ G Y+ + + I + +++ Y + + +A+ + Sbjct: 608 YADDAL------------YEL--GNTYVNQNQNEKGIATYDKLISGYKSSSYVAKAILKQ 653 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGY 261 Y D A + YP Sbjct: 654 GLIYYNGNKEDLALTKFKKVVAEYPNSP 681 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 84/244 (34%), Gaps = 46/244 (18%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 T +YE ++ + K +++ + + K++L + Y+ K Sbjct: 604 PTSQYADDALYELGNTYVNQNQNEKGIATYDKLISGYKSSSYVAKAILKQGLIYYNGNKE 663 Query: 111 QQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIR-DVPYD 151 A + ++ + +YP S +Y ++ +S+ ++ D+ D Sbjct: 664 DLALTKFKKVVAEYPNSPESLEAVSTARLIYVDKGQVDEYATWVKTLSFVEVSDADLDND 723 Query: 152 ----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q +K + S V ++ N + A + + Y Sbjct: 724 TYESAEKQYLQNNSKQAISGFSSYVSKFPNGLHALKAN--------------FYLAQLYF 769 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI--QERYPQ 259 ++ ++ V+A S E E+A+ARL + Y+ D A V+ + + +PQ Sbjct: 770 ADNLEANSVKHYEFVIAQ-SRNEFTEQALARLCQVYLKEKNYDSAIPVLKRLEAEAEFPQ 828 Query: 260 GYWA 263 Sbjct: 829 NTTY 832 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 10/111 (9%) Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 E + ++ +P + A +L + + ++ + ++ I+ Y S V Sbjct: 593 IEDLEKFAKTYPTSQYADDALYELGNTYVNQNQNEKGIATYDKLISGYKSSSYVAKAILK 652 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA--RFYVTVG 185 G+ Y ++ L L ++V Y NSP A + Sbjct: 653 QGLIYYNGNKE--------DLALTKFKKVVAEYPNSPESLEAVSTARLIYV 695 Score = 43.2 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 69/222 (31%), Gaps = 39/222 (17%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + + ++ + ++LKE+N+ A + + F + Sbjct: 782 EFVIAQSRNEFTEQALARLCQVYLKEKNYDSAIPVLKRLEAEAEFPQNTTYAQSNLMKSY 841 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR--ATKLMLQYM 162 Y + A + + ++ + D + + ++ Sbjct: 842 YEKQDFTNAVVYAD------------------KVLKNDKIDDRIKSDAQIIVARSAIKTN 883 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYL-----KRGEYVAAIPRFQLV 216 P K A + ++A E+ YY K G++ + Q + Sbjct: 884 DE--------PKAKEAYAKLQ----KIAKGELAAEALYYDAYFKNKEGKFEPSNVVVQKI 931 Query: 217 LANYSDAEHA-EEAMARLVEAYVALALMDEAREVVSLIQERY 257 +YS ++ +++ + + + L +A ++ + E + Sbjct: 932 AKDYSGYKYFGAKSLVIMAKNFYGLKDSFQATYILESVIENF 973 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 32/239 (13%), Positives = 74/239 (30%), Gaps = 54/239 (22%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + + + ++ AY F + + A ++ A +Y+ ++++A ++++ Sbjct: 430 RGLELYTDGDYKGAYALFKKSISENKEAKFTARATFWKAETEYNLDQFEEAKLSFKQFLN 489 Query: 123 -----QYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 PE KN +Y Y SY ++ + + ++Y S V Sbjct: 490 ATEASNTPEFKNANYNLAY-----SYFKL--------KEYESAIEYFDSF------SKSV 530 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI------------------------- 210 K + +T +L +Y+ Y AI Sbjct: 531 KDDKIRLTDAYLRLGDCNFMAAKYWPAMDAYNKAIDMKSVDADYAAFQKGISYGFVSKPD 590 Query: 211 ---PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 + Y +++A++A+ L YV ++ + Y + Sbjct: 591 RKIEDLEKFAKTYPTSQYADDALYELGNTYVNQNQNEKGIATYDKLISGYKSSSYVAKA 649 >gi|261822328|ref|YP_003260434.1| tol-pal system protein YbgF [Pectobacterium wasabiae WPP163] gi|261606341|gb|ACX88827.1| tol-pal system protein YbgF [Pectobacterium wasabiae WPP163] Length = 258 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 51/150 (34%), Gaps = 12/150 (8%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGV 92 VG + ++ S D Y A L+++ + +A F + +P + Sbjct: 117 AAVGTDTGAANTAAPASTGDANSD---YNAAAALVLEKKQYDQAISAFQAFVKKYPDSTY 173 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + + Y+ GK AA + YP+S VG+ + ++ Sbjct: 174 QPNANYWLGQLNYNKGKKDDAAYYFANVVKNYPKSPKSSEALLKVGV--------IMQEK 225 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYV 182 ++V+ Y N+ K A+ + Sbjct: 226 GQADKAKAVYQQVVKMYPNTESAKQAQKRL 255 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 S + +++ + V++Y +S Y A +++ Sbjct: 137 ANSDYNAAAALVLEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLN----------- 185 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + + EA+ ++ D+A+ V + + Y Sbjct: 186 ---YNKGKKDDAAYYFANVVKNYPKSPKSSEALLKVGVIMQEKGQADKAKAVYQQVVKMY 242 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 243 PNTESAKQAQK 253 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 22/126 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y QA S + ++ +YP+S Y +G + Y + +V+ Sbjct: 152 KQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFANVVK 203 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SP A V V ++G+ A +Q V+ Y + E A+ Sbjct: 204 NYPKSPKSSEALLKVGVIMQ--------------EKGQADKAKAVYQQVVKMYPNTESAK 249 Query: 228 EAMARL 233 +A RL Sbjct: 250 QAQKRL 255 Score = 43.2 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ +Y AI FQ + Y D+ + A L + D+A + + + YP+ Sbjct: 149 LEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFANVVKNYPKS 208 Query: 261 YWARYVETLVK 271 + E L+K Sbjct: 209 --PKSSEALLK 217 >gi|319793388|ref|YP_004155028.1| toL-pal system protein ybgf [Variovorax paradoxus EPS] gi|315595851|gb|ADU36917.1| tol-pal system protein YbgF [Variovorax paradoxus EPS] Length = 249 Score = 60.1 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 48/132 (36%), Gaps = 8/132 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 ++ +E A+ + F+++ F + + +P +G +L QY+ Y +A Sbjct: 126 PKEKADFEAALGIFRAGQFAQSQTAFAEFVKRYPQSGYNASALFWLGNAQYATRNYNEAI 185 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + ++ P+ + ++ + T+ + + + + Y S Sbjct: 186 ANFRSMLSLAPDHAKAPEAVLSIANCQIEL--------KDTRSARRTLEDLAKAYPQSEA 237 Query: 175 VKGARFYVTVGR 186 + R ++ R Sbjct: 238 AQAGRERLSRLR 249 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + V+RY S Y A F++ + Y AI F+ + Sbjct: 146 QSQTAFAEFVKRYPQSGYNASALFWLGNAQ--------------YATRNYNEAIANFRSM 191 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 L+ D A EA+ + + L AR + + + YPQ Sbjct: 192 LSLAPDHAKAPEAVLSIANCQIELKDTRSARRTLEDLAKAYPQSE 236 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 46/142 (32%), Gaps = 22/142 (15%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 K+ +A + AG++ Q+ + E++ +YP+S + +G + R Sbjct: 128 EKADFEAALGIFRAGQFAQSQTAFAEFVKRYPQSGYNASALFWLGNAQYAT--------R 179 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 + ++ + A + + +L + +A Sbjct: 180 NYNEAIANFRSMLSLAPDHAKAPEAVLSIANCQIEL--------------KDTRSARRTL 225 Query: 214 QLVLANYSDAEHAEEAMARLVE 235 + + Y +E A+ RL Sbjct: 226 EDLAKAYPQSEAAQAGRERLSR 247 >gi|242238604|ref|YP_002986785.1| tol-pal system protein YbgF [Dickeya dadantii Ech703] gi|242130661|gb|ACS84963.1| tol-pal system protein YbgF [Dickeya dadantii Ech703] Length = 269 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 47/126 (37%), Gaps = 9/126 (7%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y AV L+++ + +A F + +P + + + Y+ GK +A Sbjct: 152 YNAAVALVLEKKQYDQAITAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKDDSAYYFAN 211 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + ++ + ++V+ Y N+ K A+ Sbjct: 212 VVKNYPKSPKASEAMFKVGV--------IMQEKGQSDKAKAIYQQVVKNYPNTDGAKQAQ 263 Query: 180 FYVTVG 185 + Sbjct: 264 KRLAGL 269 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 47/129 (36%), Gaps = 14/129 (10%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S + +++ + V++Y +S Y A +++ + Sbjct: 150 SDYNAAVALVLEKKQYDQAITAFQNFVKKYPDSTYQPNANYWLGQL-------------F 196 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y K + +A F V+ NY + A EAM ++ D+A+ + + + YP Sbjct: 197 YNKGKKDDSA-YYFANVVKNYPKSPKASEAMFKVGVIMQEKGQSDKAKAIYQQVVKNYPN 255 Query: 260 GYWARYVET 268 A+ + Sbjct: 256 TDGAKQAQK 264 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 46/127 (36%), Gaps = 22/127 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y QA + + ++ +YP+S Y +G + + Y + +V+ Sbjct: 163 KQYDQAITAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKDD--------SAYYFANVVK 214 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SP A F V V + + Y Q V+ NY + + A+ Sbjct: 215 NYPKSPKASEAMFKVGVIMQEKGQSDKAKAIY--------------QQVVKNYPNTDGAK 260 Query: 228 EAMARLV 234 +A RL Sbjct: 261 QAQKRLA 267 >gi|255011465|ref|ZP_05283591.1| TPR repeat-containing protein [Bacteroides fragilis 3_1_12] gi|313149284|ref|ZP_07811477.1| TPR domain-containing protein [Bacteroides fragilis 3_1_12] gi|313138051|gb|EFR55411.1| TPR domain-containing protein [Bacteroides fragilis 3_1_12] Length = 1002 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 74/206 (35%), Gaps = 31/206 (15%) Query: 44 RDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSR-DFPFAGVA--RKSLLM 99 + + L+ + + Y + +L +NF +A Y++Q + P + + +L+ Sbjct: 533 KYISLEKGENKTALADAYNRIGDCYLDVRNFDEAKHYYSQAEAMNTPSGDYSFYQLALVS 592 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y + +YP S Y G SY M + + + Sbjct: 593 G-----LQKDYSGKITWLNRLAGKYPASPYAISALYEKGRSYVLMDNN--------QQAI 639 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 ++ +Y SP + A EIG Y + +Y AI ++ V+ Sbjct: 640 TSFKELLAKYPESPVSRKAAA--------------EIGLLYYQNEDYNQAIDAYKQVVQK 685 Query: 220 YSDAEHAEEAMARLVEAYVALALMDE 245 Y ++ A AM L YV + +DE Sbjct: 686 YPGSDEARLAMRDLKSIYVDMNRIDE 711 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 83/294 (28%), Gaps = 62/294 (21%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K + ++A C V + Q+S + +Y++ ++N++ A Sbjct: 1 MKKKISRLICAVACCVPVALQAQTSEKI--------TSPVNLYKEGKELFLQKNYAAAMP 52 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 R + ++ M Y + A + Y+ YP++ + + +Y L+ Sbjct: 53 PLRTFVRQKADVNLKEEAEYMLVCSAYELKD-RNAIAQLRSYLDTYPDTPHANRIYALIA 111 Query: 139 MSYAQM-----------------IRDVPYDQ------------RATKLMLQYMSRIVERY 169 +Y + + D K + + Sbjct: 112 SAYFYQGNYDEALALFNSSRLDLLGNEERDDMTYRLATCYLKVGNVKEAAIWFETLKASS 171 Query: 170 TNSPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKRGEYVAA 209 Y +Y++ R + I Y + Y A Sbjct: 172 P--KYANDCSYYISYIRYTQKRYDEALKGFLPLQDDAKYKALVPYYIAEIYAIKKNYDKA 229 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS--LIQERYPQGY 261 Q L+ Y EHA E L +AY +A L +E P+ Sbjct: 230 QIVAQNYLSAYPQNEHAAEMYRILGDAYYHFGDYHKAVTSFRNYLEKENAPRRD 283 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 73/214 (34%), Gaps = 28/214 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y + ++++ +A +F + + +A + + +A Sbjct: 512 YNLGYIAFHQKDYVQAQNWFRKYISLEKGENKTALA-DAYNRIGDCYLDVRNFDEAKHYY 570 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + + + DY +Y + + + +++R+ +Y SPY Sbjct: 571 SQAEAMN--TPSGDYSFYQLALVSGLQKDYSGK--------ITWLNRLAGKYPASPYAIS 620 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A E GR Y+ AI F+ +LA Y ++ + +A A + Y Sbjct: 621 AL--------------YEKGRSYVLMDNNQQAITSFKELLAKYPESPVSRKAAAEIGLLY 666 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++A + + ++YP AR +K Sbjct: 667 YQNEDYNQAIDAYKQVVQKYPGSDEARLAMRDLK 700 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 27/218 (12%), Positives = 75/218 (34%), Gaps = 26/218 (11%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--L 98 S +++ ++ E +L+ + +++++A + + Q + +P + AR ++ L Sbjct: 640 TSFKELLAKYPESPVSRKAAAEIGLLYYQNEDYNQAIDAYKQVVQKYPGSDEARLAMRDL 699 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 S +V + A + P + D ++Y + + Sbjct: 700 KSIYVDMNRIDEFAALASAM------PGNIRFD-ASEQDSLTYMAAEKIYMR--GRVEQA 750 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + + ++ + + + A +Y+ + + ++ I L Sbjct: 751 KESFGKYLQTFPDGAFGLNAHYYLCLIGKEQKNYDM---------------ILEHSGKLL 795 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 Y D +EEA+ E +A +++E+ Sbjct: 796 EYPDNPFSEEALIMRAEVQFNKVQFADALASYKMLKEK 833 >gi|332704255|ref|ZP_08424343.1| tol-pal system protein YbgF [Desulfovibrio africanus str. Walvis Bay] gi|332554404|gb|EGJ51448.1| tol-pal system protein YbgF [Desulfovibrio africanus str. Walvis Bay] Length = 242 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 10/154 (6%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 LV + D +T + R Y+KA+ + ++ A N+ DFP + Sbjct: 97 GAVLVAASGTTMVDAGTKGLTPAQKAR--YDKALALVWDKKPEAARTLLNEFLVDFPTSN 154 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 + +L YS +Y A ++ + ++P +G SY Q+ Sbjct: 155 LTPNALYWLGETYYSQKRYSLAILTFKDVMRRFPVHSKASDAALKIGYSYEQL------- 207 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 T+ +++ Y +S + AR + Sbjct: 208 -GDTQNARLVFKNLLKTYPDSNSAELARTKLKQL 240 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 22/143 (15%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A+K+ A K + A +L E++ +P S Y +G +Y Q Sbjct: 119 AQKARYDKALALVWDKKPEAARTLLNEFLVDFPTSNLTPNALYWLGETYYS--------Q 170 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + L + ++ R+ A + QL G+ A Sbjct: 171 KRYSLAILTFKDVMRRFPVHSKASDAALKIGYSYEQL--------------GDTQNARLV 216 Query: 213 FQLVLANYSDAEHAEEAMARLVE 235 F+ +L Y D+ AE A +L + Sbjct: 217 FKNLLKTYPDSNSAELARTKLKQ 239 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 41/117 (35%), Gaps = 16/117 (13%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + ++ + + S A +++ G Y + Y AI F+ Sbjct: 137 EAARTLLNEFLVDFPTSNLTPNALYWL--------------GETYYSQKRYSLAILTFKD 182 Query: 216 VLANYS-DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 V+ + ++ ++ A+ +Y L AR V + + YP A T +K Sbjct: 183 VMRRFPVHSKASDAALKI-GYSYEQLGDTQNARLVFKNLLKTYPDSNSAELARTKLK 238 >gi|206602339|gb|EDZ38820.1| putative TPR domain-containing protein [Leptospirillum sp. Group II '5-way CG'] Length = 274 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 8/116 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 +Y +A+ + ++ + + F Q +P + +A + +++ Y +A Sbjct: 150 PSADILYRQAMNDYQTGHYQLSKKEFGQVVSLYPQSHLASSAEFWVGQSEFNMKHYDKAV 209 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 S + I YP+S Y+ +G SY + + K + R++E + Sbjct: 210 SSFLQVIKNYPDSPKRAVAYFKLGRSYESLGKK--------KDAIHSYRRVLELFP 257 Score = 54.0 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 43/131 (32%), Gaps = 23/131 (17%) Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 + D + Y M+ Q +L + ++V Y S A Sbjct: 150 PSAD-ILYRQAMNDYQT--------GHYQLSKKEFGQVVSLYPQSHLASSA--------- 191 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 E +G+ Y A+ F V+ NY D+ A +L +Y +L +A Sbjct: 192 -----EFWVGQSEFNMKHYDKAVSSFLQVIKNYPDSPKRAVAYFKLGRSYESLGKKKDAI 246 Query: 248 EVVSLIQERYP 258 + E +P Sbjct: 247 HSYRRVLELFP 257 Score = 42.0 bits (98), Expect = 0.089, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 22/124 (17%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G YQ + + ++ YP+S + VG S M + + + Sbjct: 163 YQTGHYQLSKKEFGQVVSLYPQSHLASSAEFWVGQSEFNM--------KHYDKAVSSFLQ 214 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +++ Y +SP A F + GR Y G+ AI ++ VL + Sbjct: 215 VIKNYPDSPKRAVAYFKL--------------GRSYESLGKKKDAIHSYRRVLELFPLER 260 Query: 225 HAEE 228 +E Sbjct: 261 QLDE 264 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 24/68 (35%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 +++ KA F Q +++P + + S GK + A + Sbjct: 196 GQSEFNMKHYDKAVSSFLQVIKNYPDSPKRAVAYFKLGRSYESLGKKKDAIHSYRRVLEL 255 Query: 124 YPESKNVD 131 +P + +D Sbjct: 256 FPLERQLD 263 >gi|52842259|ref|YP_096058.1| outer membrane protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629370|gb|AAU28111.1| outer membrane protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 322 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 25/140 (17%) Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P + + Y ++ +++++ YD ++ M V++Y Y A Sbjct: 193 RANPADEQISY------LAAYELVKNKRYD-----EAIKSMQTFVQKYPRGGYTANA--- 238 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 E +G YL + +Y AI F++VL Y + A ++ + AY Sbjct: 239 -----------EYWLGELYLVKKDYSKAIEHFEIVLQQYPSSSKAAASLLKSGYAYAEKG 287 Query: 242 LMDEAREVVSLIQERYPQGY 261 EA++ + + YP Sbjct: 288 DKQEAKKRFQQVVKTYPDTP 307 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 8/151 (5%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G + V S + ++ Y A +K + + +A + + +P G Sbjct: 178 AGSSNGKPQPVVAVSRANPADEQISYLAAYELVKNKRYDEAIKSMQTFVQKYPRGGYTAN 237 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + + Y +A E + QYP S G +YA+ Sbjct: 238 AEYWLGELYLVKKDYSKAIEHFEIVLQQYPSSSKAAASLLKSGYAYAEK--------GDK 289 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + + ++V+ Y ++P + A + Sbjct: 290 QEAKKRFQQVVKTYPDTPTAQLASSKLEAIN 320 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 47/136 (34%), Gaps = 22/136 (16%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 + ++A+ +Y +A + ++ +YP Y +G Y + Sbjct: 199 EQISYLAAYELVKNKRYDEAIKSMQTFVQKYPRGGYTANAEYWLGELYLVK--------K 250 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 +++ ++++Y +S + Y ++G+ A RF Sbjct: 251 DYSKAIEHFEIVLQQYPSSSKAAASLLKSGYA--------------YAEKGDKQEAKKRF 296 Query: 214 QLVLANYSDAEHAEEA 229 Q V+ Y D A+ A Sbjct: 297 QQVVKTYPDTPTAQLA 312 >gi|21673472|ref|NP_661537.1| hypothetical protein CT0640 [Chlorobium tepidum TLS] gi|21646577|gb|AAM71879.1| conserved hypothetical protein [Chlorobium tepidum TLS] Length = 262 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 47/126 (37%), Gaps = 8/126 (6%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + + ++ +K +++ A E FN P + + A Y+ Y++A Sbjct: 143 EALLSEGLIKMKRGDYAGARESFNAFMTGNPKSPKVADAQFFLAETYYNEKWYEKAILEY 202 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + I +Y +S Y G+S+A++ + ++ Y SP K Sbjct: 203 QTVIARYTKSPKRPAALYKQGLSFAKIGDEAN--------AKARYKDVLNLYPQSPEAKL 254 Query: 178 ARFYVT 183 A+ + Sbjct: 255 AQKNLD 260 Score = 42.8 bits (100), Expect = 0.050, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 37/112 (33%), Gaps = 16/112 (14%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + + + SP V A+ + Y Y AI +Q V+ Sbjct: 161 ARESFNAFMTGNPKSPKVADAQ--------------FFLAETYYNEKWYEKAILEYQTVI 206 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQERYPQGYWARYVET 268 A Y+ + A+ + ++ + A+ ++ YPQ A+ + Sbjct: 207 ARYTKSPKRPAALYKQGLSFAKIGDEANAKARYKDVLNL-YPQSPEAKLAQK 257 >gi|320539137|ref|ZP_08038808.1| tol-pal system protein [Serratia symbiotica str. Tucson] gi|320030775|gb|EFW12783.1| tol-pal system protein [Serratia symbiotica str. Tucson] Length = 258 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 49/152 (32%), Gaps = 11/152 (7%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAG 91 + G S+ + S Y AV L+++ + A F + +P + Sbjct: 116 AAVAGTSNGSTSTSVVPSNQGDENSN--YNTAVSLALEKKQYDPAISAFQSFVKQYPKST 173 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 + + Y+ GK AA + Y +S Y VG+ + + Sbjct: 174 YQPNANYWLGQLFYNKGKKDDAAYYFAVVVKNYAKSPKAPDAMYKVGI--------IMQE 225 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 + +++++Y S A+ V Sbjct: 226 KGQADKAKAVFQQVIKQYPTSAAATLAKSRVA 257 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 46/121 (38%), Gaps = 14/121 (11%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S + +++ + V++Y S Y A +++ + Sbjct: 140 SNYNTAVSLALEKKQYDPAISAFQSFVKQYPKSTYQPNANYWLGQL-------------F 186 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y K + AA F +V+ NY+ + A +AM ++ D+A+ V + ++YP Sbjct: 187 YNKGKKDDAA-YYFAVVVKNYAKSPKAPDAMYKVGIIMQEKGQADKAKAVFQQVIKQYPT 245 Query: 260 G 260 Sbjct: 246 S 246 Score = 42.4 bits (99), Expect = 0.068, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 27/66 (40%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ +Y AI FQ + Y + + A L + + D+A +++ + Y + Sbjct: 150 LEKKQYDPAISAFQSFVKQYPKSTYQPNANYWLGQLFYNKGKKDDAAYYFAVVVKNYAKS 209 Query: 261 YWARYV 266 A Sbjct: 210 PKAPDA 215 >gi|158422150|ref|YP_001523442.1| TPR repeat-containing protein [Azorhizobium caulinodans ORS 571] gi|158329039|dbj|BAF86524.1| TPR repeat precursor [Azorhizobium caulinodans ORS 571] Length = 306 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 41/141 (29%), Gaps = 23/141 (16%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 K L + Y QA ++++ YP + +++G + Sbjct: 181 TPKDLYDLGYSYVQRQDYPQAEQTFKQFLQTYPTDRLTPDATFMLGETLYLR-------- 232 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + K + ++ +Y N A + L +E AA Sbjct: 233 QTYKEAAEQFLQVSTKYPNFTRAPDALLRLGQSLAALNERE--------------AACAT 278 Query: 213 FQLVLANYSD-AEHAEEAMAR 232 F V + + +A+ R Sbjct: 279 FAEVDRKFPRATSNVRQAVER 299 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 50/147 (34%), Gaps = 15/147 (10%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + R V +++Y+ +++ Q++ +A + F Q + +P + + Sbjct: 164 GSGAQRPPVAAGVAAASTPKDLYDLGYSYVQRQDYPQAEQTFKQFLQTYPTDRLTPDATF 223 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 M Y Y++A E+++ YP +G S A + Sbjct: 224 MLGETLYLRQTYKEA---AEQFLQVSTKYPNFTRAPDALLRLGQSLAALNER-------- 272 Query: 156 KLMLQYMSRIVERYTN-SPYVKGARFY 181 + + + ++ + V+ A Sbjct: 273 EAACATFAEVDRKFPRATSNVRQAVER 299 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 22/125 (17%) Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Y +G SY Q Q + ++ Y A F + Sbjct: 185 LYDLGYSYVQRQDYP--------QAEQTFKQFLQTYPTDRLTPDATFMLGETL------- 229 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 YL R Y A +F V Y + A +A+ RL ++ AL + A + + Sbjct: 230 ------YL-RQTYKEAAEQFLQVSTKYPNFTRAPDALLRLGQSLAALNEREAACATFAEV 282 Query: 254 QERYP 258 ++P Sbjct: 283 DRKFP 287 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMDEAREVVSLIQERYP 258 Y++R +Y A F+ L Y +A L E Y+ + A + + + +YP Sbjct: 192 YVQRQDYPQAEQTFKQFLQTYPTDRLTPDATFMLGETLYLRQTYKEAAEQFLQV-STKYP 250 Query: 259 QGYWARYVETLVK 271 + R + L++ Sbjct: 251 N--FTRAPDALLR 261 >gi|299137478|ref|ZP_07030660.1| Lytic transglycosylase catalytic [Acidobacterium sp. MP5ACTX8] gi|298600883|gb|EFI57039.1| Lytic transglycosylase catalytic [Acidobacterium sp. MP5ACTX8] Length = 801 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 7/138 (5%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + +Y ++L +++ + A + + FP + A + +A++ Y Y Sbjct: 411 PQSRWLEEALYSGGNMYLLKRDSAHAIAEYTLLGQHFPRSTYAPNAHWRAAWLSYRLRHY 470 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 AA L +E IT YP + Y G +M DV + Y + Y Sbjct: 471 GDAARLMDEQITNYPAGTEIPGALYWRG----RMYEDVE---GNFGQAINYYKTLDASYV 523 Query: 171 NSPYVKGARFYVTVGRNQ 188 NS Y AR + V N+ Sbjct: 524 NSYYAMLARQRIAVLGNR 541 >gi|154491758|ref|ZP_02031384.1| hypothetical protein PARMER_01374 [Parabacteroides merdae ATCC 43184] gi|154087999|gb|EDN87044.1| hypothetical protein PARMER_01374 [Parabacteroides merdae ATCC 43184] Length = 999 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 65/218 (29%), Gaps = 36/218 (16%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-------YSAG 108 Y Y + K +++S A F R + R++ A Y Sbjct: 504 YALAYYNLGYSYFKLRDYSAALNRF----RQYVDLESNRQAA-SLADAYNRIGDCLYQNR 558 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 ++ A P DY Y G Q+ K + M R++ Sbjct: 559 QFSLAEENYSRAAQLSPS--AGDYSIYQKGFLLGL--------QKDYKGKISAMDRLISE 608 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y S YV A E GR Y+ +A F+ ++ + + A + Sbjct: 609 YPESQYVDDAL--------------FEKGRSYVLLENSSSAAQAFEKLIREFPLSSLARK 654 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 A +L Y ++A + YP A+ Sbjct: 655 AGIQLGLLYYNDNQPEKALAAYKQVISNYPGSEEAKIA 692 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 93/249 (37%), Gaps = 50/249 (20%) Query: 39 ERQSSRDVYLDSVTDVRY-QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 + S+ D + + +Y ++EK ++ +N S A + F + R+FP + +ARK+ Sbjct: 597 GKISAMDRLISEYPESQYVDDALFEKGRSYVLLENSSSAAQAFEKLIREFPLSSLARKAG 656 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNV------------------DYVYYL--V 137 + + Y+ + ++A + ++ I+ YP S+ Y Y+ + Sbjct: 657 IQLGLLYYNDNQPEKALAAYKQVISNYPGSEEAKIALQDLKSVYIDLNDINAYASYVNSI 716 Query: 138 G------------MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 G ++Y + + + ++ + + A FY+ Sbjct: 717 GGNIRLEVGEQDSLTYIAAEKLFMR--GDNDGARRSLINYLQTFPEGAFSSNANFYLGSI 774 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 A KE + AI RF+ V+A+ D + EE++AR E Sbjct: 775 --AFAKKEFD------------EAIQRFKSVIAS-GDTKFLEESVARTAEIEYLSKDYPA 819 Query: 246 AREVVSLIQ 254 A E +Q Sbjct: 820 ALESFKRLQ 828 Score = 55.5 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 95/273 (34%), Gaps = 57/273 (20%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 I +C +VG + Y D ++ + +N++ + + Sbjct: 4 ILIPLCIVVGSHVAYGQRSYQFDAPDR-----LFVEGKELFSLKNYAGCIDKLEAYKQHS 58 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--- 144 A + +++ M + Y G+ A L ++Y+ +YP S++ D + Y++G + + Sbjct: 59 TNADLIQEADYMLVYAAYEQGR-PNADELLKDYLEEYPASRHSDEIGYMIGSVHFKRGEY 117 Query: 145 -----------IRDVPYDQRAT---------------KLMLQYMSRIVERYTNSPYVKGA 178 I + +Q+ + Y +RI + Y + + Sbjct: 118 EKAIFWFNEADIDMLSPEQQEAYSFRLAYSLLQTGEMEKARGYFARIEQV--GDKYKEAS 175 Query: 179 RFYVTVGRNQLAAK--------------------EVEIGRYYLKRGEYVAAIPRFQLVLA 218 +YV + + I + Y + +Y + + +L+ Sbjct: 176 TYYVAYIDYAMGNYNNALIEFSRLKESPKYREQSQYYIAQIYFIQSKYEKVVKEGEELLS 235 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 Y D+++ E + ++Y L ++A ++S Sbjct: 236 LYPDSKNNSEMYRIVGDSYYHLGDQEKAIRMLS 268 Score = 52.8 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 75/234 (32%), Gaps = 36/234 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGE 118 +++ A F+Q + + AR + Y G+Y+ A S Sbjct: 431 LFQLGTQAFANVKLDDAVSLFSQAIQLGSYNMEARNDAYFWRGESYYRMGEYENAISDYR 490 Query: 119 EYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 Y+ +N D YY +G SY ++ R L + V+ +N Sbjct: 491 TYLN-NTRQRNTDMYALAYYNLGYSYFKL--------RDYSAALNRFRQYVDLESNRQAA 541 Query: 176 --KGARFYVTVG-------------RNQLAAKEVEIGRY--YLK------RGEYVAAIPR 212 A + ++ A G Y Y K + +Y I Sbjct: 542 SLADAYNRIGDCLYQNRQFSLAEENYSRAAQLSPSAGDYSIYQKGFLLGLQKDYKGKISA 601 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 +++ Y ++++ ++A+ +YV L A + + +P AR Sbjct: 602 MDRLISEYPESQYVDDALFEKGRSYVLLENSSSAAQAFEKLIREFPLSSLARKA 655 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 74/201 (36%), Gaps = 31/201 (15%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 ++ V D + Y A + N++ A F++ +S A + + Sbjct: 164 IEQVGDKYKEASTYYVAYIDYAMGNYNNALIEFSRLKES---PKYREQSQYYIAQIYFIQ 220 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 KY++ GEE ++ YP+SKN +Y +VG SY + + ++ + Sbjct: 221 SKYEKVVKEGEELLSLYPDSKNNSEMYRIVGDSYYHLGDQ--------EKAIRML----- 267 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 S YV + ++ I G Y +G Y + + + E Sbjct: 268 ----SKYVSSTENPL--------RSDLYILGVCYFNKGNYSNTVNALSRTVR--QNDELT 313 Query: 227 EEAMARLVEAYVALALMDEAR 247 + A L ++Y+ L + AR Sbjct: 314 QNAYLYLGQSYLKLGDKNNAR 334 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 49/170 (28%), Gaps = 38/170 (22%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S T+ + ++Y V + + N+S ++ R + + + L G Sbjct: 272 SSTENPLRSDLYILGVCYFNKGNYSNTVNALSRTVRQN--DELTQNAYLYLGQSYLKLGD 329 Query: 110 Y--------QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 A S ++ I + Y +YA +I + + + Sbjct: 330 KNNARMAFEAAATSSFDKQIK--------EVAMY----NYALLIHETAF--TGFGESVTI 375 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + NS Y Y+ YL Y AA+ Sbjct: 376 FEDFLNDFPNSQYADKVNDYLVEV--------------YLTTKNYEAALK 411 >gi|251790480|ref|YP_003005201.1| tol-pal system protein YbgF [Dickeya zeae Ech1591] gi|247539101|gb|ACT07722.1| tol-pal system protein YbgF [Dickeya zeae Ech1591] Length = 272 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A L+++ + +A F + +P + + + Y+ GK +A Sbjct: 155 YNAAASLVLEKKQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKDDSAYYFAN 214 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + ++ T ++++ Y N+ K A+ Sbjct: 215 VVKSYPKSPKASEAMFKVGL--------IMQEKGQTDKAKAVYQQVIKNYPNTDGAKQAQ 266 Query: 180 FYVTVG 185 + Sbjct: 267 KRLDSL 272 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 47/131 (35%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + +++ + V++Y +S Y A +++ Sbjct: 151 ANTDYNAAASLVLEKKQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQL------------ 198 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +Y K + +A F V+ +Y + A EAM ++ D+A+ V + + Y Sbjct: 199 -FYNKGKKDDSA-YYFANVVKSYPKSPKASEAMFKVGLIMQEKGQTDKAKAVYQQVIKNY 256 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 257 PNTDGAKQAQK 267 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 22/126 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y QA + ++ +YP+S Y +G + + Y + +V+ Sbjct: 166 KQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKDD--------SAYYFANVVK 217 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SP A F V + ++G+ A +Q V+ NY + + A+ Sbjct: 218 SYPKSPKASEAMFKVGLIMQ--------------EKGQTDKAKAVYQQVIKNYPNTDGAK 263 Query: 228 EAMARL 233 +A RL Sbjct: 264 QAQKRL 269 >gi|71275794|ref|ZP_00652078.1| TPR repeat [Xylella fastidiosa Dixon] gi|71900393|ref|ZP_00682526.1| TPR repeat [Xylella fastidiosa Ann-1] gi|170730226|ref|YP_001775659.1| hypothetical protein Xfasm12_1070 [Xylella fastidiosa M12] gi|71163372|gb|EAO13090.1| TPR repeat [Xylella fastidiosa Dixon] gi|71729825|gb|EAO31923.1| TPR repeat [Xylella fastidiosa Ann-1] gi|167965019|gb|ACA12029.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 271 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 49/154 (31%), Gaps = 10/154 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 + S +V+ D+ E Y A LK ++ A E F + +P + Sbjct: 124 MSEQSPNVHGDASALTISNEERIAYNVAFDALKNSKYADAAELFISFLQLYPNGVYTPNA 183 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + Y+ + A + +++YP + A ++ Sbjct: 184 IYWLGESYYAMHDFVSAEAQFRSLLSRYPTHDKASGSLLKEALCQANQGKNDD------- 236 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 + +++ +Y + + A+ + + A Sbjct: 237 -AQHSLEQVLSQYPGTDAARLAQERLQSMKLSQA 269 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + ++ Y N Y A +++ G Y ++V+A +F+ + Sbjct: 162 DAAELFISFLQLYPNGVYTPNAIYWL--------------GESYYAMHDFVSAEAQFRSL 207 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 L+ Y + A ++ + D+A+ + + +YP AR + ++ Sbjct: 208 LSRYPTHDKASGSLLKEALCQANQGKNDDAQHSLEQVLSQYPGTDAARLAQERLQ 262 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 23/58 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 LK +Y A F L Y + + A+ L E+Y A+ A + RYP Sbjct: 155 LKNSKYADAAELFISFLQLYPNGVYTPNAIYWLGESYYAMHDFVSAEAQFRSLLSRYP 212 >gi|296103327|ref|YP_003613473.1| tol-pal system protein YbgF [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057786|gb|ADF62524.1| tol-pal system protein YbgF [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 264 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 45/123 (36%), Gaps = 9/123 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F + +P + + + Y+ GK AA Sbjct: 146 YNAAIALVQDKSRQDDAIVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAFYFAS 205 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ T ++V ++ + K A+ Sbjct: 206 VVKNYPKSPKAPDAMFKVGV--------IMQDKGDTAKAKAVYQQVVAKFPGTEGAKQAQ 257 Query: 180 FYV 182 + Sbjct: 258 KRL 260 Score = 52.0 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + V++Y +S Y A +++ Sbjct: 142 ANTDYNAAIALVQDKSRQDDAIVAFQNFVKKYPDSTYQPNANYWLGQLN----------- 190 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 Y K + AA F V+ NY + A +AM ++ +A+ V + ++ Sbjct: 191 --YNKGKKDDAAFY-FASVVKNYPKSPKAPDAMFKVGVIMQDKGDTAKAKAVYQQVVAKF 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTEGAKQAQK 258 >gi|42527006|ref|NP_972104.1| hypothetical protein TDE1498 [Treponema denticola ATCC 35405] gi|41817430|gb|AAS12015.1| conserved hypothetical protein [Treponema denticola ATCC 35405] Length = 501 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 7/92 (7%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 LL S G A + E++ Y S N+D +L G +Y ++ + K Sbjct: 412 LLDMIRGYISEGNAASALNSAEDFFKNY--SVNLDEALFLRGQAY-----ELNGPNKNIK 464 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 L+ + + Y S + A + + Sbjct: 465 KALEAYQTLTKAYPESKFWDKADARIRYIKKF 496 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 5/74 (6%) Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQ 254 R Y+ G +A+ + NY + + +EA+ +AY + +A E + Sbjct: 417 RGYISEGNAASALNSAEDFFKNY--SVNLDEALFLRGQAYELNGPNKNIKKALEAYQTLT 474 Query: 255 ERYPQGYWARYVET 268 + YP+ + + Sbjct: 475 KAYPESKFWDKADA 488 >gi|264677755|ref|YP_003277661.1| hypothetical protein CtCNB1_1619 [Comamonas testosteroni CNB-2] gi|262208267|gb|ACY32365.1| hypothetical conserved protein [Comamonas testosteroni CNB-2] Length = 253 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 49/137 (35%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T R +++ +E+A+ + F +A + F R +P +G QY+ Sbjct: 125 EFTADRNEQQEFEQALGMFRSGKFPEAGQAFAAFLRQWPKSGYTPSVRFWLGNSQYATRD 184 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ A + +T P + ++ + TK + + +++ Y Sbjct: 185 YKNAIANFRSVMTNAPMHARAPEAALSIANCLVEL--------KDTKAARKTLEELLQAY 236 Query: 170 TNSPYVKGARFYVTVGR 186 NS A+ + + Sbjct: 237 PNSEAAGIAKSKLATLK 253 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q + + ++ S Y RF++ + Y R Y AI F+ V Sbjct: 150 EAGQAFAAFLRQWPKSGYTPSVRFWLGNSQ-------------YATRD-YKNAIANFRSV 195 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + N A EA + V L AR+ + + + YP Sbjct: 196 MTNAPMHARAPEAALSIANCLVELKDTKAARKTLEELLQAYPNSE 240 Score = 35.5 bits (81), Expect = 9.0, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 22/133 (16%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 + A + +GK+ +A ++ Q+P+S V + +G S D Sbjct: 132 EQQEFEQALGMFRSGKFPEAGQAFAAFLRQWPKSGYTPSVRFWLGNSQY-----ATRD-- 184 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 K + ++ A + +L + AA Sbjct: 185 -YKNAIANFRSVMTNAPMHARAPEAALSIANCLVEL--------------KDTKAARKTL 229 Query: 214 QLVLANYSDAEHA 226 + +L Y ++E A Sbjct: 230 EELLQAYPNSEAA 242 >gi|121608001|ref|YP_995808.1| hypothetical protein Veis_1013 [Verminephrobacter eiseniae EF01-2] gi|121552641|gb|ABM56790.1| Tetratricopeptide TPR_2 repeat protein [Verminephrobacter eiseniae EF01-2] Length = 265 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 47/132 (35%), Gaps = 8/132 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 ++ +E A+ + F+ A F+ R +P +G + QY+ +YQ+A Sbjct: 142 PAEKRDFEAALAVFRAGKFADAGLAFSSFVRQYPRSGFMPSARFWLGNAQYATREYQEAI 201 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + ++ P + ++ + T+ + + +++ Y S Sbjct: 202 VNFRQLLSDTPGHARAPEAALSIANCQMEL--------KDTRSARKTLEDLLQAYPQSEA 253 Query: 175 VKGARFYVTVGR 186 A+ + + Sbjct: 254 ALAAKERLAYLK 265 Score = 38.9 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 14/101 (13%) Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 S V +Y S ++ ARF++ + EY AI F+ +L++ Sbjct: 166 AFSSFVRQYPRSGFMPSARFWLGNAQ--------------YATREYQEAIVNFRQLLSDT 211 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A EA + + L AR+ + + + YPQ Sbjct: 212 PGHARAPEAALSIANCQMELKDTRSARKTLEDLLQAYPQSE 252 >gi|227327558|ref|ZP_03831582.1| hypothetical protein PcarcW_09600 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 258 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 46/134 (34%), Gaps = 9/134 (6%) Query: 50 SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + Y AV L+++ + +A F + +P + + + Y+ G Sbjct: 130 APASTGDANTDYNAAVALVLEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKG 189 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 K AA + YP+S VG+ + ++ ++V+ Sbjct: 190 KKDDAAYYFANVVKNYPKSPKSSEALLKVGV--------IMQEKGQVDKAKAVYQQVVKM 241 Query: 169 YTNSPYVKGARFYV 182 Y N+ K A+ + Sbjct: 242 YPNTESAKQAQKRL 255 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 41/112 (36%), Gaps = 14/112 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + V++Y +S Y A +++ +G+ A F V Sbjct: 156 QAISAFQAFVKKYPDSTYQPNANYWLGQLN--------------YNKGKKDDAAYYFANV 201 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + NY + + EA+ ++ +D+A+ V + + YP A+ + Sbjct: 202 VKNYPKSPKSSEALLKVGVIMQEKGQVDKAKAVYQQVVKMYPNTESAKQAQK 253 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 22/129 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y QA S + ++ +YP+S Y +G + Y + +V+ Sbjct: 152 KQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFANVVK 203 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SP A V V ++G+ A +Q V+ Y + E A+ Sbjct: 204 NYPKSPKSSEALLKVGVIMQ--------------EKGQVDKAKAVYQQVVKMYPNTESAK 249 Query: 228 EAMARLVEA 236 +A RL + Sbjct: 250 QAQKRLSAS 258 Score = 43.6 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ +Y AI FQ + Y D+ + A L + D+A + + + YP+ Sbjct: 149 LEKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFANVVKNYPKS 208 Query: 261 YWARYVETLVK 271 + E L+K Sbjct: 209 --PKSSEALLK 217 >gi|221068060|ref|ZP_03544165.1| tol-pal system protein YbgF [Comamonas testosteroni KF-1] gi|220713083|gb|EED68451.1| tol-pal system protein YbgF [Comamonas testosteroni KF-1] Length = 253 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 51/137 (37%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T R +++ +E+A+ + F +A + F R +P +G QY+ Sbjct: 125 EFTADRNEQQDFEQALGMFRSGKFPEAGQAFAAFLRQWPKSGYTPSVRFWLGNSQYATRD 184 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ A + +T P +S I + + + TK + + +++ Y Sbjct: 185 YKNAIANFRSVMTTTPMHARSPEA----ALS----IANCQVELKDTKAARKTLEELLQAY 236 Query: 170 TNSPYVKGARFYVTVGR 186 NS A+ + + Sbjct: 237 PNSEAAGIAKSKLATLK 253 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q + + ++ S Y RF++ + Y R Y AI F+ V Sbjct: 150 EAGQAFAAFLRQWPKSGYTPSVRFWLGNSQ-------------YATRD-YKNAIANFRSV 195 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + EA + V L AR+ + + + YP Sbjct: 196 MTTTPMHARSPEAALSIANCQVELKDTKAARKTLEELLQAYPNSE 240 Score = 35.9 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 44/133 (33%), Gaps = 27/133 (20%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 ++L M + +GK+ +A ++ Q+P+S V + +G S D Sbjct: 137 EQALGM-----FRSGKFPEAGQAFAAFLRQWPKSGYTPSVRFWLGNSQY-----ATRD-- 184 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 K + ++ A + + +L + AA Sbjct: 185 -YKNAIANFRSVMTTTPMHARSPEAALSIANCQVEL--------------KDTKAARKTL 229 Query: 214 QLVLANYSDAEHA 226 + +L Y ++E A Sbjct: 230 EELLQAYPNSEAA 242 >gi|261341332|ref|ZP_05969190.1| putative periplasmic protein [Enterobacter cancerogenus ATCC 35316] gi|288316637|gb|EFC55575.1| putative periplasmic protein [Enterobacter cancerogenus ATCC 35316] Length = 262 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 45/123 (36%), Gaps = 9/123 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F + +P + + + Y+ GK AA Sbjct: 144 YNAAIALVQDKSRQDDAIVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAFYFAS 203 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ T ++V ++ + K A+ Sbjct: 204 VVKNYPKSPKAPDAMFKVGV--------IMQDKGDTAKAKAVYQQVVAKFPGTEGAKQAQ 255 Query: 180 FYV 182 + Sbjct: 256 KRL 258 Score = 52.0 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + V++Y +S Y A +++ Sbjct: 140 ANTDYNAAIALVQDKSRQDDAIVAFQNFVKKYPDSTYQPNANYWLGQLN----------- 188 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 Y K + AA F V+ NY + A +AM ++ +A+ V + ++ Sbjct: 189 --YNKGKKDDAAFY-FASVVKNYPKSPKAPDAMFKVGVIMQDKGDTAKAKAVYQQVVAKF 245 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 246 PGTEGAKQAQK 256 >gi|307823679|ref|ZP_07653907.1| tol-pal system protein YbgF [Methylobacter tundripaludum SV96] gi|307734973|gb|EFO05822.1| tol-pal system protein YbgF [Methylobacter tundripaludum SV96] Length = 285 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 46/133 (34%), Gaps = 8/133 (6%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 +Q++ ++ V +++ Y++A L+ + ++A FN P A + Sbjct: 143 KQAAVQTSGEASAPVGDEKQQYQQAYEALRNGHNAQAIAEFNTLLGKNPKGEYANNAQYW 202 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 A I YP S V +G + +Q+ Sbjct: 203 LGEAYRVNQDIDSARKAFSGVIENYPGSSKVPDALLKLG--------TIEVEQKNPVKAR 254 Query: 160 QYMSRIVERYTNS 172 +Y++R+ + +S Sbjct: 255 EYLTRVTVDFPSS 267 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 36/104 (34%), Gaps = 14/104 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + ++ + Y A++++ Y + +A F V Sbjct: 178 QAIAEFNTLLGKNPKGEYANNAQYWLGEA--------------YRVNQDIDSARKAFSGV 223 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + NY + +A+ +L V +ARE ++ + +P Sbjct: 224 IENYPGSSKVPDALLKLGTIEVEQKNPVKAREYLTRVTVDFPSS 267 Score = 38.9 bits (90), Expect = 0.71, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L+ G AI F +L E+A A L EAY +D AR+ S + E YP Sbjct: 171 LRNGHNAQAIAEFNTLLGKNPKGEYANNAQYWLGEAYRVNQDIDSARKAFSGVIENYPGS 230 Query: 261 YWARYVETLVK 271 + + L+K Sbjct: 231 S--KVPDALLK 239 >gi|118369961|ref|XP_001018183.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89299950|gb|EAR97938.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 3418 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 70/205 (34%), Gaps = 40/205 (19%) Query: 64 AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + ++ + +KA F + +R + LL G+ A S ++ Sbjct: 1780 GLCYMNIGDMNKAIAAFKKQGQINRLH------KDYLLNLGKAYIKKGQTVDAISTLSKF 1833 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + YP+ + +++ + Q+ K ++ + ++E+Y + Sbjct: 1834 MNLYPDIEET-----------YELLNYLFDLQQQPKKQIKILQNLLEKYPK-------KT 1875 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + + I K+ Y AI ++ L + + R+ YV Sbjct: 1876 KLN----------LNIADIQYKQKLYQEAIESYEKYLKENEGSREIQ---YRVAMCYVRK 1922 Query: 241 ALMDEAREVVSLIQERYPQGYWARY 265 L+ EA E+++ YP RY Sbjct: 1923 NLLKEANEILNKSIALYPDMIEYRY 1947 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 60/186 (32%), Gaps = 34/186 (18%) Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + +P K L A +QY YQ+A E+Y+ + S+ + Y Sbjct: 1861 IKILQNLLEKYP---KKTKLNLNIADIQYKQKLYQEAIESYEKYLKENEGSREI---QYR 1914 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN---SPY-----------VKGARFYV 182 V M Y + K + +++ + Y + Y + ++ + Sbjct: 1915 VAMCYVRK--------NLLKEANEILNKSIALYPDMIEYRYHLANVNLALGNYEESQKNI 1966 Query: 183 TVGRNQLAAKE--VEI-GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + I + + +Y A+ + ++ L Y + E L Y Sbjct: 1967 ELLLEHNPDHISGLFILAKLQFIQKDYKNALEKLEICLNTY---DQIPELYYLLGCCYKK 2023 Query: 240 LALMDE 245 L + D Sbjct: 2024 LGMKDL 2029 Score = 35.9 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 26/212 (12%), Positives = 60/212 (28%), Gaps = 35/212 (16%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQRE 59 + L + I + + + + ++ + + ++ + D +++ Sbjct: 2201 IQKDLTKTIEFYNEFDVKFVDQNVNALLVLSQAYFQQENTEKCQEFLNKLLQIDNKHENA 2260 Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + +L++K + KA F + + KS ++ KY +A S + Sbjct: 2261 LYLQGMLYVKLKQIDKAILEFQK-NDQH------DKSFYQLGVLKKKQKKYDEARSSFNK 2313 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I Y + + Y Q+ + Y++ Sbjct: 2314 AIQLNSNDPL-----------YYEAFGKLEYGQKEYLKACNHFE---------KYLQKVA 2353 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 N A Y Y AI Sbjct: 2354 NPEIEIINLNAQS-------YYNIKMYKEAIN 2378 >gi|39997647|ref|NP_953598.1| putative lipoprotein [Geobacter sulfurreducens PCA] gi|39984539|gb|AAR35925.1| lipoprotein, putative [Geobacter sulfurreducens PCA] gi|298506587|gb|ADI85310.1| TPR domain lipoprotein [Geobacter sulfurreducens KN400] Length = 242 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 43/136 (31%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + + + Y KA NF+ A E F + P + A +L YS Sbjct: 110 APREKDGPPDAYLKAFGLYSANNFAGAVEAFQAFLAEHPDSEYAGNALYWIGECHYSRSD 169 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 +A +YP S V G + M + + + + + +Y Sbjct: 170 LPRALDAFRLVAERYPASTKVPDALLKSGYTLYAM--------KEPERAREILESLAAKY 221 Query: 170 TNSPYVKGARFYVTVG 185 SP AR + V Sbjct: 222 PRSPAAAKARERLAVA 237 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 45/140 (32%), Gaps = 30/140 (21%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 AF YSA + A + ++ ++P+S+ Y +G + D+P L Sbjct: 124 AFGLYSANNFAGAVEAFQAFLAEHPDSEYAGNALYWIGECHYSRS-DLPR-------ALD 175 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-- 218 + ERY S V A + E R + +L Sbjct: 176 AFRLVAERYPASTKVPDALLKSGYTLYAMKEPE------------------RAREILESL 217 Query: 219 --NYSDAEHAEEAMARLVEA 236 Y + A +A RL A Sbjct: 218 AAKYPRSPAAAKARERLAVA 237 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 38/104 (36%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 ++ + + +S Y A +++ R + A+ F+LV Sbjct: 136 AVEAFQAFLAEHPDSEYAGNALYWIGECH--------------YSRSDLPRALDAFRLVA 181 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y + +A+ + A+ + ARE++ + +YP+ Sbjct: 182 ERYPASTKVPDALLKSGYTLYAMKEPERAREILESLAAKYPRSP 225 Score = 42.8 bits (100), Expect = 0.057, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 1/87 (1%) Query: 46 VYLDSVTDVRYQ-REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 +L D Y +Y + +A + F + +P + +LL S + Sbjct: 142 AFLAEHPDSEYAGNALYWIGECHYSRSDLPRALDAFRLVAERYPASTKVPDALLKSGYTL 201 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVD 131 Y+ + ++A + E +YP S Sbjct: 202 YAMKEPERAREILESLAAKYPRSPAAA 228 Score = 35.5 bits (81), Expect = 9.2, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + A+ FQ LA + D+E+A A+ + E + + + + A + L+ ERYP Sbjct: 131 NNFAGAVEAFQAFLAEHPDSEYAGNALYWIGECHYSRSDLPRALDAFRLVAERYPAST-- 188 Query: 264 RYVETLVK 271 + + L+K Sbjct: 189 KVPDALLK 196 >gi|307610773|emb|CBX00385.1| hypothetical protein LPW_21061 [Legionella pneumophila 130b] Length = 326 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 25/140 (17%) Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P + + Y ++ +++++ YD ++ M V++Y Y A Sbjct: 197 RANPADEQISY------LAAYELVKNKRYD-----EAIKSMQTFVQKYPRGGYTANA--- 242 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 E +G YL + +Y AI F++VL Y + A ++ + AY Sbjct: 243 -----------EYWLGELYLVKKDYPKAIEHFEIVLQQYPSSSKAAASLLKSGYAYAEKG 291 Query: 242 LMDEAREVVSLIQERYPQGY 261 EA++ + + YP Sbjct: 292 DTQEAKKRFQQVVKTYPDTP 311 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 50/151 (33%), Gaps = 8/151 (5%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G + V S + ++ Y A +K + + +A + + +P G Sbjct: 182 TGPSNSKPQPVIAVSRANPADEQISYLAAYELVKNKRYDEAIKSMQTFVQKYPRGGYTAN 241 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + + Y +A E + QYP S G +YA+ T Sbjct: 242 AEYWLGELYLVKKDYPKAIEHFEIVLQQYPSSSKAAASLLKSGYAYAEK--------GDT 293 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + + ++V+ Y ++P + A + Sbjct: 294 QEAKKRFQQVVKTYPDTPTAQLASSKLEAIN 324 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 49/136 (36%), Gaps = 22/136 (16%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 + ++A+ +Y +A + ++ +YP Y +G + +D P Sbjct: 203 EQISYLAAYELVKNKRYDEAIKSMQTFVQKYPRGGYTANAEYWLG-ELYLVKKDYP---- 257 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 +++ ++++Y +S + Y ++G+ A RF Sbjct: 258 ---KAIEHFEIVLQQYPSSSKAAASLLKSGYA--------------YAEKGDTQEAKKRF 300 Query: 214 QLVLANYSDAEHAEEA 229 Q V+ Y D A+ A Sbjct: 301 QQVVKTYPDTPTAQLA 316 >gi|57242172|ref|ZP_00370112.1| competence lipoprotein (comL) [Campylobacter upsaliensis RM3195] gi|57017364|gb|EAL54145.1| competence lipoprotein (comL) [Campylobacter upsaliensis RM3195] Length = 215 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 69/177 (38%), Gaps = 15/177 (8%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + S+ + F ++ ++Y S + Y + + L++++ KA +++ + Sbjct: 5 LLILSLIITFFTACSTKNKDELYNLSSSQW------YTQIIKDLQDKDLEKADTHYSGMA 58 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + + +L++ A +YQ A +EY ++ SKNVDY YL + + Sbjct: 59 SEHIADPLLEPTLIILAQAHMDEEEYQLAEFYLDEYNKKFGNSKNVDYTRYLKIKAKFEA 118 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +Q Q + ++ Y N+ Y + +T I +YL Sbjct: 119 FAVPNRNQALMLQSQQEIDNFLKEYPNTQYKPLVQTMLTK---------FNIAVFYL 166 >gi|167035187|ref|YP_001670418.1| tol-pal system protein YbgF [Pseudomonas putida GB-1] gi|166861675|gb|ABZ00083.1| tol-pal system protein YbgF [Pseudomonas putida GB-1] Length = 268 Score = 59.7 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 51/136 (37%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ Y+ A +K+++F KA + FN R +P + A + V + G Sbjct: 141 EPGDPAKEKLYYDAAFDLIKQKDFDKASQAFNAFLRKYPNSQYAGNAQYWLGEVNLAKGD 200 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 A+ + +YP+ V Y + DV T + + +++ +Y Sbjct: 201 LPGASQAFAQVSQKYPKHSKVPDSLYKLA--------DVERRMGHTDKVKGILQQVITQY 252 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 253 PGTSAAQLAQRDLQKL 268 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 44/120 (36%), Gaps = 14/120 (11%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q+ Q + + +Y NS Y A++++ LA ++ A Sbjct: 161 QKDFDKASQAFNAFLRKYPNSQYAGNAQYWLGEVN--LAKGDL------------PGASQ 206 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 F V Y +++ +L + + D+ + ++ + +YP A+ + ++ Sbjct: 207 AFAQVSQKYPKHSKVPDSLYKLADVERRMGHTDKVKGILQQVITQYPGTSAAQLAQRDLQ 266 >gi|325474068|gb|EGC77256.1| hypothetical protein HMPREF9353_01606 [Treponema denticola F0402] Length = 517 Score = 59.7 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 7/92 (7%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 LL S G A + E++ Y S N+D +L G +Y ++ + K Sbjct: 428 LLDMIRGYISEGNAASALNSAEDFFKNY--SVNLDEALFLRGQAY-----ELNGPNKNIK 480 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 L+ + + Y S + A + + Sbjct: 481 KALEAYQTLTKAYPESKFWDKADARIRYIKKF 512 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 5/74 (6%) Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA---LMDEAREVVSLIQ 254 R Y+ G +A+ + NY + + +EA+ +AY + +A E + Sbjct: 433 RGYISEGNAASALNSAEDFFKNY--SVNLDEALFLRGQAYELNGPNKNIKKALEAYQTLT 490 Query: 255 ERYPQGYWARYVET 268 + YP+ + + Sbjct: 491 KAYPESKFWDKADA 504 >gi|15606983|ref|NP_214365.1| hypothetical protein aq_1989 [Aquifex aeolicus VF5] gi|2984229|gb|AAC07758.1| putative protein [Aquifex aeolicus VF5] Length = 853 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 57/131 (43%), Gaps = 12/131 (9%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 EVY + + + + KA YF + +++ K+LL A Y+ G+ ++A Sbjct: 495 ETPEEVYLTGLSYFIDGEYEKAIPYFEKLTQN---EEYRLKALLKLADSYYNLGQKEKAR 551 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 ++ +++Y ++ L+G++ ++ + TK + + + E+Y NSP Sbjct: 552 AIYTLILSKYSQNPEAKEA--LLGVAQIEI-------EAPTKELEKIVKDFEEKYPNSPL 602 Query: 175 VKGARFYVTVG 185 + + + Sbjct: 603 LPELKLQLARI 613 >gi|187251683|ref|YP_001876165.1| putative tol-pal system protein [Elusimicrobium minutum Pei191] gi|186971843|gb|ACC98828.1| Putative Tol-Pal system protein [Elusimicrobium minutum Pei191] Length = 229 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S V V+E A + L ++ + A E F FP + +++ + ++ + Sbjct: 101 SAKAVILPTTVFETAKVNLDDKKYDSAIEGFKLYIEKFPEGELVQEAYNLIGDAYFAKKE 160 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ AA I +YP+SK Y + YA+ I +P +++ QY+ I++ Y Sbjct: 161 YKSAAIEYANLIKKYPKSKKTP--SYR--LKYAKSI--IPLNKKT--EAKQYLQSIIQDY 212 Query: 170 TNSPYVKGARFYVTVGR 186 S K A+ + + Sbjct: 213 PKSSEAKVAQRELGKLK 229 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 44/121 (36%), Gaps = 14/121 (11%) Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 V D + ++ +E++ V+ A IG Y + EY Sbjct: 117 VNLDDKKYDSAIEGFKLYIEKFPEGELVQEAYN--------------LIGDAYFAKKEYK 162 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 +A + ++ Y ++ + ++ + L EA++ + I + YP+ A+ + Sbjct: 163 SAAIEYANLIKKYPKSKKTPSYRLKYAKSIIPLNKKTEAKQYLQSIIQDYPKSSEAKVAQ 222 Query: 268 T 268 Sbjct: 223 R 223 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 31/68 (45%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 E + L +Y +AI F+L + + + E +EA + +AY A A + + Sbjct: 112 FETAKVNLDDKKYDSAIEGFKLYIEKFPEGELVQEAYNLIGDAYFAKKEYKSAAIEYANL 171 Query: 254 QERYPQGY 261 ++YP+ Sbjct: 172 IKKYPKSK 179 >gi|160872344|ref|ZP_02062476.1| TPR repeat protein [Rickettsiella grylli] gi|159121143|gb|EDP46481.1| TPR repeat protein [Rickettsiella grylli] Length = 357 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 44/125 (35%), Gaps = 8/125 (6%) Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 LK + +++A F ++ FP + + G+ A +++IT+Y Sbjct: 231 QLLKTKQYNEAISAFEAFNKKFPNDLNGANADYFLGQLYLLQGQADSAIRFFKQFITRYS 290 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + V G++Y +++++Y +S + A + Sbjct: 291 QDARVPDAMLQCGLAYFAKGDKA--------AATGLFEKLIQQYPDSKAAQAAEARLQQF 342 Query: 186 RNQLA 190 + ++ Sbjct: 343 KAMIS 347 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 42/115 (36%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + +++ N A + +G+ YL +G+ +AI F+ Sbjct: 240 EAISAFEAFNKKFPNDLNGANA--------------DYFLGQLYLLQGQADSAIRFFKQF 285 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + YS +AM + AY A A + + ++YP A+ E ++ Sbjct: 286 ITRYSQDARVPDAMLQCGLAYFAKGDKAAATGLFEKLIQQYPDSKAAQAAEARLQ 340 >gi|74318222|ref|YP_315962.1| TPR repeat-containing protein [Thiobacillus denitrificans ATCC 25259] gi|74057717|gb|AAZ98157.1| conserved hypothetical protein containg TPR repeat [Thiobacillus denitrificans ATCC 25259] Length = 265 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 31/79 (39%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + YE A+ ++ + A F + +P + +A + + Y+ Y+ A + Sbjct: 143 SESRAYEAALGQFRQGKYEDAIASFKGFLKTYPASTLAANAQYWVGYAYYALKDYKAALA 202 Query: 116 LGEEYITQYPESKNVDYVY 134 ++ + YP S V Sbjct: 203 QQQKLVAAYPASPKVPDAL 221 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 14/110 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q + + ++ Y S A+++V Y +Y AA+ Sbjct: 157 QGKYEDAIASFKGFLKTYPASTLAANAQYWVGYA--------------YYALKDYKAALA 202 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + Q ++A Y + +A+ + + +AL M AR+ + I ++P Sbjct: 203 QQQKLVAAYPASPKVPDALLNMATSQIALDDMAGARKTLEQIVAKHPGTN 252 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 2/71 (2%) Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 A E +G++ ++G+Y AI F+ L Y + A A + AY AL A Sbjct: 147 AYEAALGQF--RQGKYEDAIASFKGFLKTYPASTLAANAQYWVGYAYYALKDYKAALAQQ 204 Query: 251 SLIQERYPQGY 261 + YP Sbjct: 205 QKLVAAYPASP 215 >gi|166365876|ref|YP_001658149.1| lytic transglycosylase catalytic precursor [Microcystis aeruginosa NIES-843] gi|166088249|dbj|BAG02957.1| lytic transglycosylase catalytic precursor [Microcystis aeruginosa NIES-843] Length = 722 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 88/237 (37%), Gaps = 31/237 (13%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 +DV + + R Y A+ L++ A + + +P +A + LL Sbjct: 72 KDVADANAPSLDRSRARYLLAMDLLRKYEGGPALKQLEGLEKQYP--VLAPQILLKQGRA 129 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM---SYAQ-MIRDVPYDQRATKLML 159 + ++A + ++ + YP+S V YY +G SY + ++++ P R L+ Sbjct: 130 HELSNDSEKAQEIWQKLLETYPQSPVVAEAYYSLGKYDPSYHEKLLKEYPRHPRTLALIR 189 Query: 160 QYMSRIVERYTNSPYVKGARFY-----VTVGRNQL----------AAKEVEIGRYYLKRG 204 Q + +++ +++ A+ + R++L A + IG Y + G Sbjct: 190 QRLQENPDQFP--LWLQLAKANPFDPTLNQARDRLVKDYAEQLTPADWAM-IGAGYWQSG 246 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y A + E+A R + EAR + + YPQ Sbjct: 247 LYEKAYKAYAKA------TPSPEQA-YRYARGLQIAKKLPEARSAYQKLIKTYPQAS 296 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 74/240 (30%), Gaps = 29/240 (12%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 A+ W+ Y + Y A + +A + + + +P A Sbjct: 236 AMIGAGYWQSGLYEKAYKAYAKATPSPEQAYRYARGLQIAKKLPEARSAYQKLIKTYPQA 295 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 LL A + A + + + Q+P+ +++ Sbjct: 296 SETGLGLLRLA----QISPNRDAIAYLDRIVKQFPD--RAPEALEAKA----KLLNS--- 342 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 + Q ++ +Y S R +A + K G+Y A Sbjct: 343 --TNAQAASQTWQTLLNKYPKSDEAAD-------YRWLMAQRA-------AKSGDYAKAW 386 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 Q + N SD++ A +A + + L EA++ + R+P Y+A L+ Sbjct: 387 QWAQPIAVNNSDSQTAPKAAFWVGKWAQKLGKNQEAKQAFTYTISRHPHSYYAWRSAVLL 446 >gi|188994328|ref|YP_001928580.1| hypothetical protein PGN_0464 [Porphyromonas gingivalis ATCC 33277] gi|188594008|dbj|BAG32983.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 995 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 76/225 (33%), Gaps = 50/225 (22%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +YEK + + A E FN + P + AR+S L + Y+ G+ ++A + Sbjct: 621 LYEKGCGAVLSGKHNVAEEAFNAVVKRSPDSREARQSSLQLGLLYYNTGRTKEAIRTYQR 680 Query: 120 YITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPYDQ--------- 152 I +YP S+ +Y Y+ G+ I +Q Sbjct: 681 IIDRYPRSEETTVALSDLRSIYLEEDRIDEYSAYVRGLKDKVSIAPSETEQLGFLSAERK 740 Query: 153 --RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 R + + +ERY A E+ + + G AA Sbjct: 741 YRRRQPDARRDLEAYLERYPQGSDRHKA--------------ELYLADLDYQAGNADAAY 786 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALA-LMDEAREVVSLIQ 254 R+ ++ ++ E ++A + L + E +E + +Q Sbjct: 787 NRYSRLV----NSPGLPE--DYKIDARLRLGRMQYERKEYKAALQ 825 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 57/206 (27%), Gaps = 25/206 (12%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAAS 115 Y + + A E F + A ++ + +Y + A Sbjct: 508 PLGYYRLGYSLFNAERYDMALEAFKEYVSRSGIAPNLSADAYARIGDCRYMKRDFHGARE 567 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 YP DY + + +Q + +++ + +S ++ Sbjct: 568 AYSMAYRVYPSG--GDYALLRRA--------RLEGLAKQYADQIQTLDKLIREFPDSRHL 617 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 A Y L+ K + F V+ D+ A ++ +L Sbjct: 618 T-AALYEKGCGAVLSGKH-NVAE------------EAFNAVVKRSPDSREARQSSLQLGL 663 Query: 236 AYVALALMDEAREVVSLIQERYPQGY 261 Y EA I +RYP+ Sbjct: 664 LYYNTGRTKEAIRTYQRIIDRYPRSE 689 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 32/240 (13%), Positives = 61/240 (25%), Gaps = 60/240 (25%) Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 A +P K+ L A + Y AG A + Y S + Y Sbjct: 747 DARRDLEAYLERYPQGSDRHKAELYLADLDYQAGN---ADAAYNRYSRLV-NSPGLPEDY 802 Query: 135 -----------------YLVGMSYAQMIRDVP-----YDQ-----RATKLMLQYMSRIVE 167 Y + Q + D DQ + + R+++ Sbjct: 803 KIDARLRLGRMQYERKEYKAALQSFQSVLDTDGAEAVRDQAVQGVTESAYADKDYRRVID 862 Query: 168 ---------RYTNSP--YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA------- 209 ++ Y + + + R +A E+ + G A Sbjct: 863 VIAGLKNQAALPHTLRLYRAKSYQALKMNREAIADYELLAEDFSTATGA-EAVVMQAQLE 921 Query: 210 --IPR---FQLVLANY-----SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + +L + L + Y AR+ + +++ YP Sbjct: 922 MEAKRLSKAKFILEKFIAKSTPQQYWLARGFILLSDIYKKEGDTFTARQYLESLEKNYPN 981 >gi|54294941|ref|YP_127356.1| hypothetical protein lpl2020 [Legionella pneumophila str. Lens] gi|53754773|emb|CAH16260.1| hypothetical protein lpl2020 [Legionella pneumophila str. Lens] Length = 322 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 25/140 (17%) Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P + + Y ++ +++++ YD ++ M V++Y Y A Sbjct: 193 RANPADEQISY------LAAYELVKNKRYD-----EAIKSMQTFVQKYPRGGYTANA--- 238 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 E +G YL + +Y AI F++VL Y + A ++ + AY Sbjct: 239 -----------EYWLGELYLVKKDYPKAIEHFEIVLQQYPSSSKAAASLLKSGYAYAEKG 287 Query: 242 LMDEAREVVSLIQERYPQGY 261 EA++ + + YP Sbjct: 288 DTQEAKKRFQQVVKTYPDTP 307 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 50/151 (33%), Gaps = 8/151 (5%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G + V S + ++ Y A +K + + +A + + +P G Sbjct: 178 AGPSNSKPQPVIAVSRANPADEQISYLAAYELVKNKRYDEAIKSMQTFVQKYPRGGYTAN 237 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + + Y +A E + QYP S G +YA+ T Sbjct: 238 AEYWLGELYLVKKDYPKAIEHFEIVLQQYPSSSKAAASLLKSGYAYAEK--------GDT 289 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + + ++V+ Y ++P + A + Sbjct: 290 QEAKKRFQQVVKTYPDTPTAQLASSKLEAIN 320 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 46/136 (33%), Gaps = 22/136 (16%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 + ++A+ +Y +A + ++ +YP Y +G Y Sbjct: 199 EQISYLAAYELVKNKRYDEAIKSMQTFVQKYPRGGYTANAEYWLGELYLVKKDYP----- 253 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 +++ ++++Y +S + Y ++G+ A RF Sbjct: 254 ---KAIEHFEIVLQQYPSSSKAAASLLKSGYA--------------YAEKGDTQEAKKRF 296 Query: 214 QLVLANYSDAEHAEEA 229 Q V+ Y D A+ A Sbjct: 297 QQVVKTYPDTPTAQLA 312 >gi|189346281|ref|YP_001942810.1| tol-pal system protein YbgF [Chlorobium limicola DSM 245] gi|189340428|gb|ACD89831.1| tol-pal system protein YbgF [Chlorobium limicola DSM 245] Length = 255 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 49/134 (36%), Gaps = 8/134 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + V + + + L + +FS+A E F+ + +P + + + A ++ Sbjct: 130 KASSVLTDSALLKDGMQKLAKNSFSEARESFSLLMQTYPKSDLVDDAQFTIAESYFNEKW 189 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y++A + I +Y +S Y +++ Q+ V +V Y Sbjct: 190 YEKAVLEYQVVIARYTKSNKRPAALYKQALAFEQLGDQVN--------ARARFRDVVSVY 241 Query: 170 TNSPYVKGARFYVT 183 +S A+ + Sbjct: 242 PSSSEAALAKKKLQ 255 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + S +++ Y S V A+ I Y Y A+ +Q+V Sbjct: 155 EARESFSLLMQTYPKSDLVDDAQ--------------FTIAESYFNEKWYEKAVLEYQVV 200 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 +A Y+ + A+ + A+ L AR + YP A + ++ Sbjct: 201 IARYTKSNKRPAALYKQALAFEQLGDQVNARARFRDVVSVYPSSSEAALAKKKLQ 255 >gi|253702301|ref|YP_003023490.1| tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21] gi|251777151|gb|ACT19732.1| tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21] Length = 304 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 51/141 (36%), Gaps = 22/141 (15%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + G Y +A S E + +P Y + +SY + + + ++ Sbjct: 39 FDQGDYYRAISEYERVLYFFPAEPAAKAAQYKIALSYLKGEK--------WGVAVEKFRT 90 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + R+ + + A +G Y + ++ +A+ +Q ++ Y Sbjct: 91 LAGRHPDEETGRKAL--------------FMVGETYFAKKDHASALAAYQEFVSRYPQES 136 Query: 225 HAEEAMARLVEAYVALALMDE 245 ++EA ++ Y++ ++ Sbjct: 137 QSDEARMKMGWCYLSQGQWEQ 157 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 15/125 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A+ +LK + + A E F + P RK+L M ++ + A + +E+ Sbjct: 69 YKIALSYLKGEKWGVAVEKFRTLAGRHPDEETGRKALFMVGETYFAKKDHASALAAYQEF 128 Query: 121 ITQYPESKNVDYVYYLVGMSYAQM---------IRDVPY------DQRATKLMLQYMSRI 165 +++YP+ D +G Y R +P D + + Sbjct: 129 VSRYPQESQSDEARMKMGWCYLSQGQWEQGAGAFRGIPRESARHEDGQRLAAAAGEFPLL 188 Query: 166 VERYT 170 + Sbjct: 189 PRKSP 193 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 21/160 (13%), Positives = 47/160 (29%), Gaps = 19/160 (11%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 +A+ + ++ S + + + + ++ +A + + FP Sbjct: 5 IVAILLIFACSVGAA----FASPLQLTAESAL-SFGDHLFDQGDYYRAISEYERVLYFFP 59 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMI 145 A+ + A K+ A E++ T +P+ + ++VG +Y Sbjct: 60 AEPAAKAAQYKIALSYLKGEKWGVAV---EKFRTLAGRHPDEETGRKALFMVGETYFAKK 116 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 L V RY AR + Sbjct: 117 DHAS--------ALAAYQEFVSRYPQESQSDEARMKMGWC 148 Score = 43.2 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 14/110 (12%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 +DQ + R++ + P K A++ + + YLK ++ A Sbjct: 39 FDQGDYYRAISEYERVLYFFPAEPAAKAAQYKIALS--------------YLKGEKWGVA 84 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + +F+ + + D E +A+ + E Y A A RYPQ Sbjct: 85 VEKFRTLAGRHPDEETGRKALFMVGETYFAKKDHASALAAYQEFVSRYPQ 134 >gi|327403579|ref|YP_004344417.1| hypothetical protein Fluta_1587 [Fluviicola taffensis DSM 16823] gi|327319087|gb|AEA43579.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola taffensis DSM 16823] Length = 1028 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 83/212 (39%), Gaps = 27/212 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAASLGEE 119 + + V ++ + A + F + +P + V+ K++ SA ++ KY +A + Sbjct: 432 FNRGVELFQKSEYQNAIKAFELVDK-YPISPEVSAKAMYWSADAEFYLKKYSEAVKKYSQ 490 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 ++ + G + + D Y+ L L+ + + + N Y+K + Sbjct: 491 FMG-------------MSGSQSSGLRSDAMYNTGYAYLALKDPIKTQDAFRN--YLKESN 535 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-----DAEHAEEAMARLV 234 +T N+ A + +G Y + + I QL + NY + ++A+ + Sbjct: 536 --LTDL-NKKADAHMRVGDEYFRNPKADNGIN--QLAIDNYKAAYNLKVGYDDQALYYMA 590 Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYV 266 Y + DE + ++ + YP+ + + Sbjct: 591 RTYGYMGKSDEKIQSLTDLINNYPKSRYMQRS 622 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 69/207 (33%), Gaps = 18/207 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 + +Y A + + + ++P + ++S+ A V Y +A Sbjct: 583 DQALYYMARTYGYMGKSDEKIQSLTDLINNYPKSRYMQRSIEEIALVYYQRENLDKAERY 642 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS---RIVERYTNSP 173 ++ I+ YP S V Y+ +G + + +L + I ER S Sbjct: 643 YKQIISDYPTSSRVPEAYHYLGDIAFKRSN-FNQAETFYLKVLNEFNLNDTICEREVTSL 701 Query: 174 YVKGARFYVTVGRNQLAAK---EVEIG-----RYY------LKRGEYVAAIPRFQLVLAN 219 + LA K I YY ++ E+ A+I F L Sbjct: 702 ADVYRAQRLLNKIESLAGKYSCADSIATQVEDEYYRQGFDLYEKSEWNASIVEFDKYLNK 761 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEA 246 Y + + +AM + +A L +A Sbjct: 762 YPNGKFYRDAMNQKADALYRLKKESDA 788 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 26/146 (17%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + +Y A +IT Y SKN Y Y G+S ++ + + Sbjct: 38 FEKEQYSAARKEFRLFITDYKGSKNDSYYIKALYYEGLSALELFNN---------DAIDL 88 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + Y S Y N L +IGRYY ++ +Y +I F + + Sbjct: 89 LETFNREYPESIYRD----------NIL----FQIGRYYYQKKDYKRSIVYFNQLNRSSV 134 Query: 222 DAEHAEEAMARLVEAYVALALMDEAR 247 + E+ EE +L AY E++ Sbjct: 135 EKENQEEYYFKLGYAYFDEKQYPESK 160 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 66/203 (32%), Gaps = 23/203 (11%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + + E Y + ++ ++ + F++ +P R ++ A Y K A Sbjct: 729 TQVEDEYYRQGFDLYEKSEWNASIVEFDKYLNKYPNGKFYRDAMNQKADALYRLKKESDA 788 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 ++ + IT N DY ++ + + + ++ + L Y R E +N Sbjct: 789 IAIYK--ITL--AGPNDDYTE----LASVRTAKFL-FNGTQKEAALPYYKRTEESSSNPE 839 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y+ AR + L Y A+ Q VL + EA Sbjct: 840 YLNNARIGLMRCHFLL--------------ENYANAVEYAQKVLGVQQTTQLKLEAEYIK 885 Query: 234 VEAYVALALMDEAREVVSLIQER 256 + + EA + + + Sbjct: 886 GVSLSKEKRVAEAEISLEYVVKN 908 >gi|16116639|emb|CAC82711.1| YbgF protein [Erwinia chrysanthemi] Length = 274 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 46/126 (36%), Gaps = 9/126 (7%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A L+++ + +A F + +P + + + Y+ GK AA Sbjct: 157 YNTAASLVLEKKQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKDDAAYYFAN 216 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + ++ T ++V+ Y N+ K A+ Sbjct: 217 VVKNYPKSPKASEAMFKVGV--------IMQEKGQTDKAKAVYQQVVKTYPNTDGAKQAQ 268 Query: 180 FYVTVG 185 + Sbjct: 269 KRLAGL 274 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + +++ + V++Y +S Y A +++ Sbjct: 153 ANTDYNTAASLVLEKKQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQL------------ 200 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +Y K + AA F V+ NY + A EAM ++ D+A+ V + + Y Sbjct: 201 -FYNKGKKDDAA-YYFANVVKNYPKSPKASEAMFKVGVIMQEKGQTDKAKAVYQQVVKTY 258 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 259 PNTDGAKQAQK 269 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 22/127 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y QA + ++ +YP+S Y +G + + Y + +V+ Sbjct: 168 KQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKDD--------AAYYFANVVK 219 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SP A F V V ++G+ A +Q V+ Y + + A+ Sbjct: 220 NYPKSPKASEAMFKVGVIMQ--------------EKGQTDKAKAVYQQVVKTYPNTDGAK 265 Query: 228 EAMARLV 234 +A RL Sbjct: 266 QAQKRLA 272 >gi|294507873|ref|YP_003571931.1| Conserved hypothetical protein, containing tetratricopeptide repeat domain [Salinibacter ruber M8] gi|294344201|emb|CBH24979.1| Conserved hypothetical protein, containing tetratricopeptide repeat domain [Salinibacter ruber M8] Length = 639 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 33/235 (14%), Positives = 75/235 (31%), Gaps = 30/235 (12%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + Y++ + + + +A F++ + + + +A ++ A + + G++ Sbjct: 414 PETAAAEEGQYQRGRIAVLRDSLDRARLLFSRLAANAQSSDLADQAQYELALLHFYQGEF 473 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMS--------------YAQMIRDVPYDQRATK 156 A+ I++ P + + L + +R Q A Sbjct: 474 DATAARAAS-ISENPSADVANDAIALKTLLQEARGPDSLDTPLRTFARVRLYER-QHAYG 531 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L + ++ R+ P ARF LA + AA+ F+ V Sbjct: 532 RALDSLDALLRRHPRHPLADDARFRRANI--HLARHDTS------------AALTAFRAV 577 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + + A+ ++ R A A E + YP A + ++ Sbjct: 578 PERHPRSPFADRSLFRSASLLEANGRPAAAVETYDRLLSEYPTSLLAGDARSRLR 632 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 68/214 (31%), Gaps = 49/214 (22%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-------- 109 + ++ A Q + A +P +GVA ++ + + Sbjct: 295 QILFGFARRAADAQRYGVATRACEAIQEQYPRSGVAPEAQKLRGDLYRRWADQGADSTTA 354 Query: 110 ------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y +A + + ++ + P + +G R++ + +S Sbjct: 355 AQDSVRYARARTAYKTFLRENPGHADYPAALLRLGTLQIDAYRNLD-------DAQETLS 407 Query: 164 RIVERYTNSPYVKGARF---YVTVGRNQL----------------------AAKEVEIGR 198 ++V + + + ++ + V R+ L A E+ + Sbjct: 408 QLVSNHPETAAAEEGQYQRGRIAVLRDSLDRARLLFSRLAANAQSSDLADQAQYELALLH 467 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 +Y GE+ A R + N A+ A +A+A Sbjct: 468 FYQ--GEFDATAARAASISEN-PSADVANDAIAL 498 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 37/115 (32%), Gaps = 8/115 (6%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 + +A + + R P +A + A + + A + ++P S D Sbjct: 530 YGRALDSLDALLRRHPRHPLADDARFRRANIHLARHDTSAALTAFRAVPERHPRSPFAD- 588 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 S + + + R ++ R++ Y S AR + V R Sbjct: 589 ------RSLFRSASLLEANGRPA-AAVETYDRLLSEYPTSLLAGDARSRLRVLRR 636 >gi|116048899|ref|YP_792300.1| hypothetical protein PA14_51690 [Pseudomonas aeruginosa UCBPP-PA14] gi|115584120|gb|ABJ10135.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 274 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 48/137 (35%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ Y+ A +K ++F KA + FN R +P + + + V + G Sbjct: 146 EPGDPAKEKLYYDAAFDLIKSKDFDKASQAFNAFLRKYPNSQYSGNAQYWLGEVNLAKGD 205 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A YP S+ V Y + DV + +++ +Y Sbjct: 206 LQGAGQAFARVSQSYPSSQKVPDSLYKLA--------DVERRLGNNDKAKGILQQVISQY 257 Query: 170 TNSPYVKGARFYVTVGR 186 + + A+ + R Sbjct: 258 PGTSAAQLAQRDLKNLR 274 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 22/147 (14%) Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 P + +YY +I+ +D Q + + +Y NS Y A++++ Sbjct: 147 PGDPAKEKLYYDAA---FDLIKSKDFD-----KASQAFNAFLRKYPNSQYSGNAQYWLGE 198 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 LA +++ A F V +Y ++ +++ +L + L D Sbjct: 199 VN--LAKGDLQ------------GAGQAFARVSQSYPSSQKVPDSLYKLADVERRLGNND 244 Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271 +A+ ++ + +YP A+ + +K Sbjct: 245 KAKGILQQVISQYPGTSAAQLAQRDLK 271 >gi|15596171|ref|NP_249665.1| hypothetical protein PA0974 [Pseudomonas aeruginosa PAO1] gi|254239322|ref|ZP_04932645.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|254245257|ref|ZP_04938579.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|5815421|gb|AAD52665.1|AF177774_2 periplasmic protein [Pseudomonas aeruginosa] gi|9946881|gb|AAG04363.1|AE004530_16 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|126171253|gb|EAZ56764.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126198635|gb|EAZ62698.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] Length = 274 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 48/137 (35%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ Y+ A +K ++F KA + FN R +P + + + V + G Sbjct: 146 EPGDPAKEKLYYDAAFDLIKSKDFDKASQAFNAFLRKYPNSQYSGNAQYWLGEVNLAKGD 205 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A YP S+ V Y + DV + +++ +Y Sbjct: 206 LQGAGQAFARVSQSYPSSQKVPDSLYKLA--------DVERRLGNNDKAKGILQQVISQY 257 Query: 170 TNSPYVKGARFYVTVGR 186 + + A+ + R Sbjct: 258 PGTSAAQLAQRDLKNLR 274 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 22/147 (14%) Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 P + +YY +I+ +D Q + + +Y NS Y A++++ Sbjct: 147 PGDPAKEKLYYDAA---FDLIKSKDFD-----KASQAFNAFLRKYPNSQYSGNAQYWLGE 198 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 LA +++ A F V +Y ++ +++ +L + L D Sbjct: 199 VN--LAKGDLQ------------GAGQAFARVSQSYPSSQKVPDSLYKLADVERRLGNND 244 Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271 +A+ ++ + +YP A+ + +K Sbjct: 245 KAKGILQQVISQYPGTSAAQLAQRDLK 271 >gi|307130111|ref|YP_003882127.1| SecB-dependent secretory protein [Dickeya dadantii 3937] gi|306527640|gb|ADM97570.1| SecB-dependent secretory protein [Dickeya dadantii 3937] Length = 274 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 46/126 (36%), Gaps = 9/126 (7%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A L+++ + +A F + +P + + + Y+ GK AA Sbjct: 157 YNTAASLVLEKKQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKDDAAYYFAN 216 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + ++ T ++V+ Y N+ K A+ Sbjct: 217 VVKNYPKSPKASEAMFKVGV--------IMQEKGQTDKAKAVYQQVVKTYPNTDGAKQAQ 268 Query: 180 FYVTVG 185 + Sbjct: 269 KRLAGL 274 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + +++ + V++Y +S Y A +++ Sbjct: 153 ANTDYNTAASLVLEKKQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQL------------ 200 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +Y K + AA F V+ NY + A EAM ++ D+A+ V + + Y Sbjct: 201 -FYNKGKKDDAA-YYFANVVKNYPKSPKASEAMFKVGVIMQEKGQTDKAKAVYQQVVKTY 258 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 259 PNTDGAKQAQK 269 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 22/127 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y QA + ++ +YP+S Y +G + + Y + +V+ Sbjct: 168 KQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKDD--------AAYYFANVVK 219 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SP A F V V ++G+ A +Q V+ Y + + A+ Sbjct: 220 NYPKSPKASEAMFKVGVIMQ--------------EKGQTDKAKAVYQQVVKTYPNTDGAK 265 Query: 228 EAMARLV 234 +A RL Sbjct: 266 QAQKRLA 272 >gi|289548649|ref|YP_003473637.1| hypothetical protein Thal_0878 [Thermocrinis albus DSM 14484] gi|289182266|gb|ADC89510.1| Tetratricopeptide TPR_2 repeat protein [Thermocrinis albus DSM 14484] Length = 850 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 70/202 (34%), Gaps = 44/202 (21%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A+ + +N+ + + R ++ L+ A G +A S Sbjct: 435 YYRALAYFNMKNYKEVITTLEKDDRL--------QARLLKAEAYLLLGNPAKARSYL--- 483 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + D YL+G+SY + +++ SR+ E +SP A Sbjct: 484 ------TPQTDRELYLLGLSYFM--------EEDYNKAVEFFSRVPE---SSPLRPQALL 526 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VA 239 + G + G+ A ++ V+ Y D +A +A L+EA Sbjct: 527 KM--------------GDAFYNMGDLSKAQETYRKVIEEYPDTPYARQATLALLEAKPTN 572 Query: 240 LALMDEAREVVSLIQERYPQGY 261 + + E + + +++ P Sbjct: 573 MNIEQETKLIEDYLKKD-PDSP 593 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 56/131 (42%), Gaps = 11/131 (8%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + RE+Y + + E++++KA E+F++ + + ++LL Y+ G +A Sbjct: 486 QTDRELYLLGLSYFMEEDYNKAVEFFSRVPES---SPLRPQALLKMGDAFYNMGDLSKAQ 542 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + I +YP++ ++ + ++ TKL+ Y+ ++ +SP Sbjct: 543 ETYRKVIEEYPDTPYARQA----TLALLEAKPTNMNIEQETKLIEDYL----KKDPDSPT 594 Query: 175 VKGARFYVTVG 185 + + + Sbjct: 595 AQHLKLQLAKL 605 Score = 42.0 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 56/139 (40%), Gaps = 19/139 (13%) Query: 135 YLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 Y ++Y M I + D R +L+ + ++ AR Y+T ++ Sbjct: 435 YYRALAYFNMKNYKEVITTLEKDDRLQARLLKAEAYLLLGNP-----AKARSYLTPQTDR 489 Query: 189 LAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 E+ + G Y +Y A+ F V + + +A+ ++ +A+ + + +A+ Sbjct: 490 ----ELYLLGLSYFMEEDYNKAVEFFSRVPES---SPLRPQALLKMGDAFYNMGDLSKAQ 542 Query: 248 EVVSLIQERYPQGYWARYV 266 E + E YP +AR Sbjct: 543 ETYRKVIEEYPDTPYARQA 561 >gi|88810550|ref|ZP_01125807.1| hypothetical protein NB231_15758 [Nitrococcus mobilis Nb-231] gi|88792180|gb|EAR23290.1| hypothetical protein NB231_15758 [Nitrococcus mobilis Nb-231] Length = 275 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 54/135 (40%), Gaps = 8/135 (5%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D ++ YE+A L++ ++++ + F++ +P + A + Y + Q Sbjct: 146 DSSEEQTAYERAFNTLRDGRYARSQQEFHEFLHHYPDSQYADNARYWLGESYYVERHFDQ 205 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A ++ + +P S +G + ++Q + + ++++RY NS Sbjct: 206 AMQQFQKVLDDFPHSGKRPGAQLKIG--------FIQHEQGKLDRARKTLGKVIQRYPNS 257 Query: 173 PYVKGARFYVTVGRN 187 A+ + + N Sbjct: 258 TAANLAQQRLRLIGN 272 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 46/119 (38%), Gaps = 15/119 (12%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + + D R + Q + Y +S Y AR+++ YY+ Sbjct: 154 YERAFNTLRDGRYAR-SQQEFHEFLHHYPDSQYADNARYWLGE-------------SYYV 199 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 +R + A+ +FQ VL ++ + A ++ +D AR+ + + +RYP Sbjct: 200 ER-HFDQAMQQFQKVLDDFPHSGKRPGAQLKIGFIQHEQGKLDRARKTLGKVIQRYPNS 257 >gi|117923779|ref|YP_864396.1| hypothetical protein Mmc1_0465 [Magnetococcus sp. MC-1] gi|117607535|gb|ABK42990.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1] Length = 377 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 51/138 (36%), Gaps = 8/138 (5%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 + +E Y++A L++ + +A E F+ + + +A + + Y Sbjct: 240 PKVLPQATNAKEAYDQAKLYVTSGQYDRAQELFDGFLKQYGSDPLADNAQYWLGEMHYVQ 299 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 ++ A + ++P S V +G S+ ++ + + + ++V+ Sbjct: 300 RNFRSALVEFNNVLVKWPNSGKVPDSLLKIGFSFYEL--------EDYENARRALEQLVQ 351 Query: 168 RYTNSPYVKGARFYVTVG 185 Y N+ V A + Sbjct: 352 NYPNANAVPLAMQRLKRI 369 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 51/137 (37%), Gaps = 22/137 (16%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A + ++G+Y +A L + ++ QY D Y +G + QR + Sbjct: 254 DQAKLYVTSGQYDRAQELFDGFLKQYGSDPLADNAQYWLGEMHYV--------QRNFRSA 305 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 L + ++ ++ NS V + + +Y + +Y A + ++ Sbjct: 306 LVEFNNVLVKWPNSGKVPDSLLKIGF-------------SFY-ELEDYENARRALEQLVQ 351 Query: 219 NYSDAEHAEEAMARLVE 235 NY +A AM RL Sbjct: 352 NYPNANAVPLAMQRLKR 368 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 44/103 (42%), Gaps = 14/103 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + +++Y + P A++++ E+ Y++R + +A+ F V Sbjct: 267 RAQELFDGFLKQYGSDPLADNAQYWLG---------EMH----YVQR-NFRSALVEFNNV 312 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 L + ++ +++ ++ ++ L + AR + + + YP Sbjct: 313 LVKWPNSGKVPDSLLKIGFSFYELEDYENARRALEQLVQNYPN 355 >gi|222111171|ref|YP_002553435.1| tol-pal system protein ybgf [Acidovorax ebreus TPSY] gi|221730615|gb|ACM33435.1| tol-pal system protein YbgF [Acidovorax ebreus TPSY] Length = 261 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 49/132 (37%), Gaps = 8/132 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 ++ +E A+ + F +A F+ R +P +G + QY+ Y++A Sbjct: 138 PAEKRDFEAALALFRAGKFGEASNAFSGFVRQYPQSGYVPSARFWLGNAQYATRDYKEAI 197 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + + ++ P+ +S I + + + T+ + + ++ Y S Sbjct: 198 NNFKALLSAAPDHARAPEA----ALS----IANCQIELKDTRAARKTLEDLLRVYPQSEA 249 Query: 175 VKGARFYVTVGR 186 A+ + + Sbjct: 250 AAAAKERLARLK 261 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 S V +Y S YV ARF++ + +Y AI F+ + Sbjct: 158 EASNAFSGFVRQYPQSGYVPSARFWLGNAQ--------------YATRDYKEAINNFKAL 203 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 L+ D A EA + + L AR+ + + YPQ Sbjct: 204 LSAAPDHARAPEAALSIANCQIELKDTRAARKTLEDLLRVYPQSE 248 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 49/143 (34%), Gaps = 22/143 (15%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A K +A + AGK+ +A++ ++ QYP+S V + +G + Sbjct: 139 AEKRDFEAALALFRAGKFGEASNAFSGFVRQYPQSGYVPSARFWLGNAQYAT-------- 190 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R K + ++ + A + + +L + AA Sbjct: 191 RDYKEAINNFKALLSAAPDHARAPEAALSIANCQIEL--------------KDTRAARKT 236 Query: 213 FQLVLANYSDAEHAEEAMARLVE 235 + +L Y +E A A RL Sbjct: 237 LEDLLRVYPQSEAAAAAKERLAR 259 >gi|34541292|ref|NP_905771.1| TPR domain-containing protein [Porphyromonas gingivalis W83] gi|34397608|gb|AAQ66670.1| TPR domain protein [Porphyromonas gingivalis W83] Length = 995 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 76/225 (33%), Gaps = 50/225 (22%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +YEK + + A E FN + P + AR+S L + Y+ G+ ++A + Sbjct: 621 LYEKGCGAVLSGKHNVAEEAFNAVVKRSPDSREARQSSLQLGLLYYNTGRTKEAIRTYQR 680 Query: 120 YITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPYDQ--------- 152 I +YP S+ +Y Y+ G+ I +Q Sbjct: 681 IIDRYPRSEETTVALSDLRSIYLEEDRIDEYSTYVRGLKDKVSIAPSETEQLGFLSAERK 740 Query: 153 --RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 R + + +ERY A E+ + + G AA Sbjct: 741 YRRRQPDARRDLEAYLERYPQGSDRHKA--------------ELYLADLDYQAGNADAAY 786 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALA-LMDEAREVVSLIQ 254 R+ ++ ++ E ++A + L + E +E + +Q Sbjct: 787 NRYSRLV----NSPGLPE--DYKIDARLRLGRMQYERKEYKAALQ 825 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 57/206 (27%), Gaps = 25/206 (12%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAAS 115 Y + + A E F + A ++ + +Y + A Sbjct: 508 PLGYYRLGYSLFNAERYDMALEAFKEYVSRSGIAPNLSADAYARIGDCRYMKRDFHGARE 567 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 YP DY + + +Q + +++ + +S ++ Sbjct: 568 AYSMAYRVYPSG--GDYALLRRA--------RLEGLAKQYADQIQTLDKLIREFPDSRHL 617 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 A Y L+ K + F V+ D+ A ++ +L Sbjct: 618 T-AALYEKGCGAVLSGKH-NVAE------------EAFNAVVKRSPDSREARQSSLQLGL 663 Query: 236 AYVALALMDEAREVVSLIQERYPQGY 261 Y EA I +RYP+ Sbjct: 664 LYYNTGRTKEAIRTYQRIIDRYPRSE 689 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 32/240 (13%), Positives = 61/240 (25%), Gaps = 60/240 (25%) Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 A +P K+ L A + Y AG A + Y S + Y Sbjct: 747 DARRDLEAYLERYPQGSDRHKAELYLADLDYQAGN---ADAAYNRYSRLV-NSPGLPEDY 802 Query: 135 -----------------YLVGMSYAQMIRDVP-----YDQ-----RATKLMLQYMSRIVE 167 Y + Q + D DQ + + R+++ Sbjct: 803 KIDARLRLGRMQYERKEYKAALQSFQSVLDTDGAEAVRDQAVQGVTESAYADKDYRRVID 862 Query: 168 ---------RYTNSP--YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA------- 209 ++ Y + + + R +A E+ + G A Sbjct: 863 VIAGLKNQAALPHTLRLYRAKSYQALKMNREAIADYELLAEDFSTATGA-EAVVMQAQLE 921 Query: 210 --IPR---FQLVLANY-----SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + +L + L + Y AR+ + +++ YP Sbjct: 922 MEAKRLSKAKSILEKFIAKSTPQQYWLARGFILLSDIYKKEGDTFTARQYLESLEKNYPN 981 >gi|225849933|ref|YP_002730167.1| Tetratricopeptide repeat family protein [Persephonella marina EX-H1] gi|225645117|gb|ACO03303.1| Tetratricopeptide repeat family protein [Persephonella marina EX-H1] Length = 228 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 51/153 (33%), Gaps = 25/153 (16%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + V +E+Y+ A+ + +A +YF ++P + + +L Sbjct: 89 EKEGAEKVRIPDNPKELYKYALNAYYKGKTEEARKYFQIFVEEYPGSDMYDNALFWIGQT 148 Query: 104 QYSAGKYQQAASLGEEYI-----------TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 Y+ G Y++A + I +YP SY ++ Sbjct: 149 YYTEGDYEKAIEAFDRLINDCETGKAQECNKYPV------AMLKKAYSYIKL-------- 194 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + + + IV R+ ++ + A + V Sbjct: 195 GEIEEAKKLLKEIVRRFPDTEESELASRKLEVL 227 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 19/112 (16%) Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 T+ +Y VE Y S A IG+ Y G+Y AI F Sbjct: 118 TEEARKYFQIFVEEYPGSDMYDNAL--------------FWIGQTYYTEGDYEKAIEAFD 163 Query: 215 LVLANYSDAEH-----AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 ++ + + AM + +Y+ L ++EA++++ I R+P Sbjct: 164 RLINDCETGKAQECNKYPVAMLKKAYSYIKLGEIEEAKKLLKEIVRRFPDTE 215 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 18/127 (14%) Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y GK ++A + ++ +YP S D + +G +Y + + ++ Sbjct: 112 AYYK-GKTEEARKYFQIFVEEYPGSDMYDNALFWIGQTYYT--------EGDYEKAIEAF 162 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 R++ N A+ L Y+K GE A + ++ + D Sbjct: 163 DRLI----NDCETGKAQECNKYPVAMLKK-----AYSYIKLGEIEEAKKLLKEIVRRFPD 213 Query: 223 AEHAEEA 229 E +E A Sbjct: 214 TEESELA 220 >gi|146310898|ref|YP_001175972.1| tol-pal system protein YbgF [Enterobacter sp. 638] gi|145317774|gb|ABP59921.1| Tetratricopeptide TPR_2 repeat protein [Enterobacter sp. 638] Length = 264 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 45/123 (36%), Gaps = 9/123 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F + +P + + + Y+ GK AA Sbjct: 146 YNAAIALVQDKSRQDDAIAAFQSFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAFYFAS 205 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ T ++V +Y + K A+ Sbjct: 206 VVKNYPKSPKASDAMFKVGV--------IMQDKGDTAKAKAVYQQVVSKYPGTEGAKQAQ 257 Query: 180 FYV 182 + Sbjct: 258 KRL 260 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 44/131 (33%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + V++Y +S Y A +++ Sbjct: 142 ANTDYNAAIALVQDKSRQDDAIAAFQSFVKKYPDSTYQPNANYWLGQLN----------- 190 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 Y K + AA F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 191 --YNKGKKDDAAFY-FASVVKNYPKSPKASDAMFKVGVIMQDKGDTAKAKAVYQQVVSKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTEGAKQAQK 258 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + + ++ +YP+S Y +G + Y + +V+ Y Sbjct: 160 DDAIAAFQSFVKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAFYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y E A++A Sbjct: 212 KSPKASDAMFKVGVIMQ--------------DKGDTAKAKAVYQQVVSKYPGTEGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|28198798|ref|NP_779112.1| hypothetical protein PD0896 [Xylella fastidiosa Temecula1] gi|182681497|ref|YP_001829657.1| tol-pal system protein YbgF [Xylella fastidiosa M23] gi|28056889|gb|AAO28761.1| conserved hypothetical protein [Xylella fastidiosa Temecula1] gi|182631607|gb|ACB92383.1| tol-pal system protein YbgF [Xylella fastidiosa M23] Length = 271 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 21/154 (13%), Positives = 49/154 (31%), Gaps = 10/154 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 + S +V+ D+ E Y A LK ++ A E F + +P + Sbjct: 124 MSEQSPNVHGDASALTISNEERIAYNVAFDALKNSKYADAAELFMSFLQLYPNGVYTPNA 183 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L Y+ + A + +++YP + A ++ Sbjct: 184 LYWLGESYYAMHDFVSAEAQFRTLLSRYPTHDKASGSLLKEALCQANQGKN--------D 235 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 + +++ +Y + + A+ + + A Sbjct: 236 AAQHSLEQVLSQYPGTDAARLAQERLQSMKLSQA 269 Score = 42.4 bits (99), Expect = 0.070, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + ++ Y N Y A +++ G Y ++V+A +F+ + Sbjct: 162 DAAELFMSFLQLYPNGVYTPNALYWL--------------GESYYAMHDFVSAEAQFRTL 207 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 L+ Y + A ++ + D A+ + + +YP AR + ++ Sbjct: 208 LSRYPTHDKASGSLLKEALCQANQGKNDAAQHSLEQVLSQYPGTDAARLAQERLQ 262 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 23/58 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 LK +Y A F L Y + + A+ L E+Y A+ A + RYP Sbjct: 155 LKNSKYADAAELFMSFLQLYPNGVYTPNALYWLGESYYAMHDFVSAEAQFRTLLSRYP 212 >gi|283784495|ref|YP_003364360.1| tetratricopeptide repeat exported protein [Citrobacter rodentium ICC168] gi|282947949|emb|CBG87513.1| putative tetratricopeptide repeat exported protein [Citrobacter rodentium ICC168] Length = 263 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 45/123 (36%), Gaps = 9/123 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F + +P + + + Y+ GK AA Sbjct: 146 YNAAIALVQDKSRQDDAIAAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 205 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ T +++ +Y + K A+ Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 180 FYV 182 + Sbjct: 258 KRL 260 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + +++Y +S Y A +++ G Sbjct: 142 ANTDYNAAIALVQDKSRQDDAIAAFQNFIKKYPDSTYQPNANYWL--------------G 187 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 188 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + + +I +YP+S Y +G + Y + +V+ Y Sbjct: 160 DDAIAAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|218893055|ref|YP_002441924.1| hypothetical protein PLES_43401 [Pseudomonas aeruginosa LESB58] gi|218773283|emb|CAW29095.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58] Length = 274 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 48/137 (35%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ Y+ A +K ++F KA + FN R +P + + + V + G Sbjct: 146 EPGDPAKEKLYYDAAFDLIKSKDFDKASQAFNAFLRKYPNSQYSGNAQYWLGEVNLAKGD 205 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A YP S+ V Y + DV + +++ +Y Sbjct: 206 LQGAGQAFARVSQSYPSSQKVPDSLYKLA--------DVERRLGNNDKAKGILQQVISQY 257 Query: 170 TNSPYVKGARFYVTVGR 186 + + A+ + R Sbjct: 258 PGTSAAQLAQRDLKNLR 274 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 22/147 (14%) Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 P + +YY +I+ +D Q + + +Y NS Y A++++ Sbjct: 147 PGDPAKEKLYYDAA---FDLIKSKDFD-----KASQAFNAFLRKYPNSQYSGNAQYWLGE 198 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 LA +++ A F V +Y ++ +++ +L + L D Sbjct: 199 VN--LAKGDLQ------------GAGQAFARVSQSYPSSQKVPDSLYKLADVERRLGNND 244 Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271 +A+ ++ + +YP A+ + +K Sbjct: 245 KAKGILQQVISQYPGTSAAQLAQRDLK 271 >gi|83814353|ref|YP_445962.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855] gi|83755747|gb|ABC43860.1| tetratricopeptide repeat domain protein [Salinibacter ruber DSM 13855] Length = 627 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 72/223 (32%), Gaps = 28/223 (12%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + Y++ + + + +A F++ + + + +A ++ A + + G++ Sbjct: 402 PETTAAEEGQYQRGRIAVLRDSLDRARLLFSRLAANAQSSDLADQAQYELALLHFYQGEF 461 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGM--------SYAQMIRDVPY-----DQRATKL 157 A+ I++ P + + L + S +R Q A Sbjct: 462 DATAARAAS-ISENPSADVANDAIALKTLLQEARGPDSLDTPLRTFARVRLHERQHAYGR 520 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 L + ++ R+ P ARF LA + AA+ F+ V Sbjct: 521 ALDSLDALLRRHPRHPLADDARFRRANI--HLARHDTS------------AALTAFRAVP 566 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + A+ ++ R A A E + YP Sbjct: 567 ERHPRSPFADRSLFRSASLLEANGRPAAAVETYDRLLSEYPTS 609 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 68/214 (31%), Gaps = 49/214 (22%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-------- 109 + ++ A Q + A +P +GVA ++ + + Sbjct: 283 QILFGFARRAADAQRYGVATRACEAIQEQYPRSGVAPEAQKLRGDLYRRWADQGADSTTA 342 Query: 110 ------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y +A + + ++ + P + +G R++ + +S Sbjct: 343 AQDSVRYARARTAYKTFLRENPGHADYPAALLRLGTLQIDAYRNLD-------DAQETLS 395 Query: 164 RIVERYTNSPYVKGARF---YVTVGRNQL----------------------AAKEVEIGR 198 ++V + + + ++ + V R+ L A E+ + Sbjct: 396 QLVSNHPETTAAEEGQYQRGRIAVLRDSLDRARLLFSRLAANAQSSDLADQAQYELALLH 455 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 +Y GE+ A R + N A+ A +A+A Sbjct: 456 FYQ--GEFDATAARAASISEN-PSADVANDAIAL 486 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 35/120 (29%), Gaps = 22/120 (18%) Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y +A + + ++P D + + T L + ER+ Sbjct: 518 YGRALDSLDALLRRHPRHPLADDARFRRANIHLARHD--------TSAALTAFRAVPERH 569 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 SP+ + F G AA+ + +L+ Y + A +A Sbjct: 570 PRSPFADRSLFRSASLLEA--------------NGRPAAAVETYDRLLSEYPTSLLAGDA 615 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 33/106 (31%), Gaps = 8/106 (7%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 + +A + + R P +A + A + + A + ++P S D Sbjct: 518 YGRALDSLDALLRRHPRHPLADDARFRRANIHLARHDTSAALTAFRAVPERHPRSPFAD- 576 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 S + + + R ++ R++ Y S A Sbjct: 577 ------RSLFRSASLLEANGRPA-AAVETYDRLLSEYPTSLLAGDA 615 >gi|71736705|ref|YP_275905.1| hypothetical protein PSPPH_3765 [Pseudomonas syringae pv. phaseolicola 1448A] gi|298488201|ref|ZP_07006237.1| tol-pal system protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71557258|gb|AAZ36469.1| conserved hypothetical protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157259|gb|EFH98343.1| tol-pal system protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 272 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 145 EPPDPTKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 204 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 205 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 256 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 257 PGTSAAQLAQRDLQRL 272 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 160 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 206 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 207 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 260 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 261 AAQLAQRDLQ 270 >gi|237730723|ref|ZP_04561204.1| tetratricopeptide TPR_2 repeat protein [Citrobacter sp. 30_2] gi|226906262|gb|EEH92180.1| tetratricopeptide TPR_2 repeat protein [Citrobacter sp. 30_2] Length = 263 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 46/123 (37%), Gaps = 9/123 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A E F + +P + + + Y+ GK AA Sbjct: 146 YNAAIALVQDKSRQDDAIEAFQNFIKKYPDSTYLPNANYWLGQLNYNKGKKDDAAFYFAS 205 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + +P+S Y VG+ + D+ + +++ +Y + K A+ Sbjct: 206 VVKNFPKSPKAADAMYKVGV--------IMQDKGDKEKAKAVYQQVITKYPGTDGAKQAQ 257 Query: 180 FYV 182 + Sbjct: 258 KRL 260 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 47/131 (35%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ ++ +++Y +S Y+ A +++ Sbjct: 142 ANTDYNAAIALVQDKSRQDDAIEAFQNFIKKYPDSTYLPNANYWLGQLN----------- 190 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 Y K + AA F V+ N+ + A +AM ++ ++A+ V + +Y Sbjct: 191 --YNKGKKDDAAFY-FASVVKNFPKSPKAADAMYKVGVIMQDKGDKEKAKAVYQQVITKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I +YP+S + Y +G + Y + +V+ + Sbjct: 160 DDAIEAFQNFIKKYPDSTYLPNANYWLGQLNYNKGKKDD--------AAFYFASVVKNFP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A + V V KE Y Q V+ Y + A++A Sbjct: 212 KSPKAADAMYKVGVIMQDKGDKEKAKAVY--------------QQVITKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|56476930|ref|YP_158519.1| hypothetical protein ebA2654 [Aromatoleum aromaticum EbN1] gi|56312973|emb|CAI07618.1| hypothetical protein ebA2654 [Aromatoleum aromaticum EbN1] Length = 246 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 48/122 (39%), Gaps = 8/122 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A+ LKE + A F Q R P + + + A + A++ Sbjct: 129 YEAALNLLKEGRYKDALTGFEQFIRQHPQSTFLPGAHFWAGNAALQAKEVAAASTYFNTV 188 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +P+ ++G++ +Q TK + + ++VER+ +S + AR Sbjct: 189 LKTWPQDAAAPDA--MLGLANSQQALG------DTKTSQETLKKLVERFPDSSAAQAARQ 240 Query: 181 YV 182 + Sbjct: 241 RL 242 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 14/106 (13%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 K L + + ++ S ++ GA + G L AKEV Y F Sbjct: 142 KDALTGFEQFIRQHPQSTFLPGA--HFWAGNAALQAKEVAAASTY------------FNT 187 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 VL + A +AM L + AL ++E + + ER+P Sbjct: 188 VLKTWPQDAAAPDAMLGLANSQQALGDTKTSQETLKKLVERFPDSS 233 >gi|261380689|ref|ZP_05985262.1| putative periplasmic protein [Neisseria subflava NJ9703] gi|284796400|gb|EFC51747.1| putative periplasmic protein [Neisseria subflava NJ9703] Length = 251 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 50/134 (37%), Gaps = 13/134 (9%) Query: 48 LDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 + S TD Q E+ Y +A + + N+S A + + +AR+++ + Q Sbjct: 121 VPSETDSAAQNELRLYNQAQKYYQRNNYSAAVAILKEADGGN-GSEIARRNMYLLLQSQQ 179 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSR 164 G + +G Y ++ S Y +G + +D+ + Sbjct: 180 RLGNCESVIEIGNRYANRFRNSPQAPDAMYSIGQCQYKLQQKDIAR---------STWRK 230 Query: 165 IVERYTNSPYVKGA 178 +++ + NS K A Sbjct: 231 LIQSFPNSEAAKRA 244 Score = 43.6 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 42/150 (28%), Gaps = 48/150 (32%) Query: 170 TNSPYVKGARFYVTVG---------RNQLAAKEVEI---GRYYLKRGEYVAA-------- 209 + + + + + A E+ + + Y +R Y AA Sbjct: 100 PKAQRLDDRKLKMNYLANGGGVPSETDSAAQNELRLYNQAQKYYQRNNYSAAVAILKEAD 159 Query: 210 ------IPR---------------FQLVLA-------NYSDAEHAEEAMARLVEAYVALA 241 I R + V+ + ++ A +AM + + L Sbjct: 160 GGNGSEIARRNMYLLLQSQQRLGNCESVIEIGNRYANRFRNSPQAPDAMYSIGQCQYKLQ 219 Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271 D AR + + +P A+ +K Sbjct: 220 QKDIARSTWRKLIQSFPNSEAAKRASISLK 249 >gi|34495566|ref|NP_899781.1| hypothetical protein CV_0111 [Chromobacterium violaceum ATCC 12472] gi|34101421|gb|AAQ57790.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 246 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 39/113 (34%), Gaps = 8/113 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+KA+ L+ ++F A + + P A A ++ + +Y A + + Sbjct: 130 YDKALNLLRARDFPNAINALSLFIQQNPQAPQAAEASYWLGVAHTALRQYDAAIDIHRRF 189 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + QYP + + I + D R+++ Y + Sbjct: 190 VEQYPNNHFAPDAL--------RNIGNCQRDLGQVDQAKNTYRRLIKLYPKTD 234 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + +S +++ +P A +++ V L +Y AAI + Sbjct: 144 NAINALSLFIQQNPQAPQAAEASYWLGVAHTAL--------------RQYDAAIDIHRRF 189 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + Y + A +A+ + L +D+A+ + + YP+ Sbjct: 190 VEQYPNNHFAPDALRNIGNCQRDLGQVDQAKNTYRRLIKLYPKTD 234 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 28/66 (42%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L+ ++ AI L + A A EA L A+ AL D A ++ E+YP Sbjct: 137 LRARDFPNAINALSLFIQQNPQAPQAAEASYWLGVAHTALRQYDAAIDIHRRFVEQYPNN 196 Query: 261 YWARYV 266 ++A Sbjct: 197 HFAPDA 202 >gi|307545158|ref|YP_003897637.1| hypothetical protein HELO_2568 [Halomonas elongata DSM 2581] gi|307217182|emb|CBV42452.1| hypothetical protein HELO_2568 [Halomonas elongata DSM 2581] Length = 268 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 43/119 (36%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R Q ++ Y S A +++ + A E++ AA Sbjct: 160 RDFGAAKQAFQSFIDDYPQSGLTANAYYWLGELHS--AESELD------------AAADA 205 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 F V+ +Y D+ +A+ +L + +RE++ +Q YP A + ++ Sbjct: 206 FNRVIESYPDSNKVPDALYKLGLLKARQGDPEASRELLERVQNDYPDSSAANLADDFLR 264 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 47/115 (40%), Gaps = 8/115 (6%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 RE Y+ A ++ ++F A + F D+P +G+ + + + + AA Sbjct: 147 REAYQAAFAKVQARDFGAAKQAFQSFIDDYPQSGLTANAYYWLGELHSAESELDAAADAF 206 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 I YP+S V Y +G+ A+ D A++ + R+ Y +S Sbjct: 207 NRVIESYPDSNKVPDALYKLGLLKARQG-----DPEASRE---LLERVQNDYPDS 253 >gi|121594095|ref|YP_985991.1| hypothetical protein Ajs_1725 [Acidovorax sp. JS42] gi|120606175|gb|ABM41915.1| Tetratricopeptide TPR_2 repeat protein [Acidovorax sp. JS42] Length = 261 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 49/132 (37%), Gaps = 8/132 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 ++ +E A+ + F +A F+ R +P +G + QY+ Y++A Sbjct: 138 PAEKRDFEAALALFRAGKFGEASNAFSGFVRQYPQSGYVPSARFWLGNAQYATRDYKEAI 197 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + + ++ P+ +S I + + + T+ + + ++ Y S Sbjct: 198 NNFKALLSAAPDHARAPEA----ALS----IANCQIELKDTRAARKTLEDLLRVYPQSEA 249 Query: 175 VKGARFYVTVGR 186 A+ + + Sbjct: 250 AAAAKERLARLK 261 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 S V +Y S YV ARF++ + +Y AI F+ + Sbjct: 158 EASNAFSGFVRQYPQSGYVPSARFWLGNAQ--------------YATRDYKEAINNFKAL 203 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 L+ D A EA + + L AR+ + + YPQ Sbjct: 204 LSAAPDHARAPEAALSIANCQIELKDTRAARKTLEDLLRVYPQSE 248 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 49/143 (34%), Gaps = 22/143 (15%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A K +A + AGK+ +A++ ++ QYP+S V + +G + Sbjct: 139 AEKRDFEAALALFRAGKFGEASNAFSGFVRQYPQSGYVPSARFWLGNAQYAT-------- 190 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R K + ++ + A + + +L + AA Sbjct: 191 RDYKEAINNFKALLSAAPDHARAPEAALSIANCQIEL--------------KDTRAARKT 236 Query: 213 FQLVLANYSDAEHAEEAMARLVE 235 + +L Y +E A A RL Sbjct: 237 LEDLLRVYPQSEAAAAAKERLAR 259 >gi|218777993|ref|YP_002429311.1| hypothetical protein Dalk_0133 [Desulfatibacillum alkenivorans AK-01] gi|218759377|gb|ACL01843.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum alkenivorans AK-01] Length = 616 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 78/228 (34%), Gaps = 37/228 (16%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 D R + +A + L+ + +++A + + + P ++ + A + A + + Sbjct: 150 EDPDNVRVLLTRAAVLLQLKKWNEASAVYEKVLKTAPEES---QTYFLLAETYHKANQPE 206 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 +A S+ + +I P S +V ++ +G M L Q + + Sbjct: 207 KAISVYQRFIENLPNSPDVISAWFFIGRVAYNM--------GDYALAAQAFEETLLLKPD 258 Query: 172 SPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIP 211 + + +L E + +G+YYL R E A Sbjct: 259 FE---QVQLNLAEVYRELGNDEKVQAIYSKMMRDAPSNTLPYLGLGQYYLSRRELEKANE 315 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F + + + +A +Y+ EA E+ S + ++ P Sbjct: 316 VFGKLREEHPQDPLVAKGIAH---SYMNNGYFAEAAEIFSALHKQTPN 360 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 77/216 (35%), Gaps = 33/216 (15%) Query: 47 YLDSVTDVRYQREVYEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 YLD + ++ +L + ++ N+ A E ++ P + LL A V Sbjct: 109 YLDKAIAKDPESRFLKQGLLEILVEKGNYQGALEESALLLKEDPDN---VRVLLTRAAVL 165 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 K+ +A+++ E+ + PE Y+L+ +Y + + + + R Sbjct: 166 LQLKKWNEASAVYEKVLKTAPEESQT---YFLLAETYHKANQ--------PEKAISVYQR 214 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +E NSP V A IGR G+Y A F+ L D E Sbjct: 215 FIENLPNSPDVISAW--------------FFIGRVAYNMGDYALAAQAFEETLLLKPDFE 260 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + L E Y L ++ + + S + P Sbjct: 261 QVQ---LNLAEVYRELGNDEKVQAIYSKMMRDAPSN 293 Score = 38.6 bits (89), Expect = 0.98, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 74/238 (31%), Gaps = 65/238 (27%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 +L + KA E F + + P + K A + G + +A E + Sbjct: 301 GQYYLSRRELEKANEVFGKLREEHPQDPLVAKG---IAHSYMNNGYFAEA---AEIFSAL 354 Query: 124 YPESKN-------VDYV----------------------YYLVGMSYAQMIRDVPYDQRA 154 + ++ N + Y YY G+ Y+ + P D A Sbjct: 355 HKQTPNDGELSYFLAYALESTGRKQEALEAYQSIPPKSSYYFQGLIYSAYLTGKPEDAMA 414 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI------------------ 196 L+ + + +V A + Q KE+ + Sbjct: 415 ALEALKAVESADHL--ETEFVIHASN----LQQQAGNKELAVKALTDRIEEEPDNINLLY 468 Query: 197 --GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM-DEAREVVS 251 G Y K+G+ A I + VL D +A+ L Y L EA+++V+ Sbjct: 469 SLGVLYDKQGDKQACIETMKQVLKIEPD---NADALNFLGYTYADLGQNLQEAKKLVA 523 >gi|218778835|ref|YP_002430153.1| tol-pal system protein YbgF [Desulfatibacillum alkenivorans AK-01] gi|218760219|gb|ACL02685.1| tol-pal system protein YbgF [Desulfatibacillum alkenivorans AK-01] Length = 276 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 45/131 (34%), Gaps = 8/131 (6%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 E Y A L + + KA F D P +A + Y Y +A Sbjct: 140 SPEEQYAGAYLHYQNREQDKAIRAFKAFLADNPDHDLADNAQYWIGEAYYDQKMYPEAIE 199 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 ++ + +YP+ +G SY + + +++ ++V Y S V Sbjct: 200 AFKQVVKKYPDQNKAPAALLKIGYSYLAVDN--------PEQASKFLRQVVTDYPFSDLV 251 Query: 176 KGARFYVTVGR 186 A+ ++ + Sbjct: 252 NKAQNKLSDLQ 262 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 40/112 (35%), Gaps = 14/112 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 ++ + + A+++ IG Y + Y AI F+ V Sbjct: 159 KAIRAFKAFLADNPDHDLADNAQYW--------------IGEAYYDQKMYPEAIEAFKQV 204 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + Y D A A+ ++ +Y+A+ ++A + + + YP + Sbjct: 205 VKKYPDQNKAPAALLKIGYSYLAVDNPEQASKFLRQVVTDYPFSDLVNKAQN 256 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 25/70 (35%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + D+ Y + ++ + +A E F Q + +P A +LL + Sbjct: 165 KAFLADNPDHDLADNAQYWIGEAYYDQKMYPEAIEAFKQVVKKYPDQNKAPAALLKIGYS 224 Query: 104 QYSAGKYQQA 113 + +QA Sbjct: 225 YLAVDNPEQA 234 >gi|289829585|ref|ZP_06547145.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 194 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F + +P + + + Y+ GK AA Sbjct: 77 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 136 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S Y VG+ + D+ T +++ +Y + K A+ Sbjct: 137 VVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQ 188 Query: 180 FYVTVG 185 + Sbjct: 189 KRLNAM 194 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + +++Y +S Y A +++ Sbjct: 73 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN----------- 121 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 122 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKY 178 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 179 PGTDGAKQAQK 189 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I +YP+S Y +G + Y + +V+ Y Sbjct: 91 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 142 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A + V V +G+ A +Q V+ Y + A++A Sbjct: 143 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 188 Query: 231 ARL 233 RL Sbjct: 189 KRL 191 >gi|332528332|ref|ZP_08404332.1| hypothetical protein HGR_00485 [Hylemonella gracilis ATCC 19624] gi|332042203|gb|EGI78529.1| hypothetical protein HGR_00485 [Hylemonella gracilis ATCC 19624] Length = 291 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 49/134 (36%), Gaps = 8/134 (5%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 R +R +E + ++ +F A F + + +P +G A + QY+ Y++A Sbjct: 152 ERAERRDFETGLGLFRKGDFPGAQNAFAEFIKRYPSSGYAPSAFFWLGNAQYATQDYKEA 211 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 ++Q + + ++ + TK + + +++ Y S Sbjct: 212 IENFRILLSQSQDHARAPEAVLAIANCQVEL--------KDTKGARKTLEELIKAYPKSD 263 Query: 174 YVKGARFYVTVGRN 187 A+ + ++ Sbjct: 264 AAATAKQRLPRLKD 277 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + ++RY +S Y A F++ + +Y AI F+++L Sbjct: 174 AQNAFAEFIKRYPSSGYAPSAFFWLGNAQ--------------YATQDYKEAIENFRILL 219 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + D A EA+ + V L AR+ + + + YP+ Sbjct: 220 SQSQDHARAPEAVLAIANCQVELKDTKGARKTLEELIKAYPKSD 263 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 35/106 (33%), Gaps = 11/106 (10%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK----EVEIGRYYLKRGEYV 207 QR K L + V GR LA + + E G ++G++ Sbjct: 120 QRQYKEALAALEERVR-------ALEPERVSVDGREFLAERAERRDFETGLGLFRKGDFP 172 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 A F + Y + +A A L A A EA E ++ Sbjct: 173 GAQNAFAEFIKRYPSSGYAPSAFFWLGNAQYATQDYKEAIENFRIL 218 >gi|311103959|ref|YP_003976812.1| tol-pal system protein YbgF [Achromobacter xylosoxidans A8] gi|310758648|gb|ADP14097.1| tol-pal system protein YbgF [Achromobacter xylosoxidans A8] Length = 229 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 17/135 (12%), Positives = 47/135 (34%), Gaps = 8/135 (5%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 ++ Y+ A+ ++ + +A E + +P + +A + +Y+ ++ Sbjct: 103 AGDPQEQAAYDGAIDLFRKGQYKEASESLAAFTALYPASQLAPSAQFYLGSSRYALKDFK 162 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + + P++ ++ S +M + RIV Y Sbjct: 163 GAIEQLNAMVQKAPDNARAPDALLVIAGSQIEMNNRAG--------AKTTLQRIVRDYPT 214 Query: 172 SPYVKGARFYVTVGR 186 +P A+ + + + Sbjct: 215 TPAASTAKSRLQLLQ 229 Score = 39.3 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 40/116 (34%), Gaps = 14/116 (12%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 K + ++ Y S A+FY+ R L ++ AI + Sbjct: 125 KEASESLAAFTALYPASQLAPSAQFYLGSSRYAL--------------KDFKGAIEQLNA 170 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++ D A +A+ + + + + A+ + I YP A ++ ++ Sbjct: 171 MVQKAPDNARAPDALLVIAGSQIEMNNRAGAKTTLQRIVRDYPTTPAASTAKSRLQ 226 >gi|317153576|ref|YP_004121624.1| tol-pal system protein YbgF [Desulfovibrio aespoeensis Aspo-2] gi|316943827|gb|ADU62878.1| tol-pal system protein YbgF [Desulfovibrio aespoeensis Aspo-2] Length = 296 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 8/129 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 + Y+ + +F A F++ + + G+ +L YS Y QA Sbjct: 174 AQATYDAGLAKYNGGDFEGARGAFDEFLKKYSSDGLTPNALYWKGETYYSQKDYAQAILT 233 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 +E ++YP+ +GMSY D D + Y+ +VE + S Sbjct: 234 FKEVTSRYPKHAKSASALLKIGMSY-----DRVGDPDN---AVFYLRALVEDFPKSAPAT 285 Query: 177 GARFYVTVG 185 AR +T Sbjct: 286 LARKELTRL 294 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 17/143 (11%), Positives = 49/143 (34%), Gaps = 24/143 (16%) Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + ++ + +Y+ G ++ A +E++ +Y Y G +Y Sbjct: 170 SAMGAQATYDAGLAKYNGGDFEGARGAFDEFLKKYSSDGLTPNALYWKGETYYS------ 223 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 Q+ + + RY A + + +++ + + +YL+ Sbjct: 224 --QKDYAQAILTFKEVTSRYPKHAKSASALLKIGMSYDRVGDPDNAV--FYLR------- 272 Query: 210 IPRFQLVLANYSDAEHAEEAMAR 232 ++ ++ + A +AR Sbjct: 273 -----ALVEDFP--KSAPATLAR 288 Score = 42.4 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 28/64 (43%) Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 G Y + +Y AI F+ V + Y + A+ ++ +Y + D A + + E Sbjct: 218 GETYYSQKDYAQAILTFKEVTSRYPKHAKSASALLKIGMSYDRVGDPDNAVFYLRALVED 277 Query: 257 YPQG 260 +P+ Sbjct: 278 FPKS 281 >gi|206901168|ref|YP_002250157.1| TPR repeat protein [Dictyoglomus thermophilum H-6-12] gi|206740271|gb|ACI19329.1| TPR repeat protein [Dictyoglomus thermophilum H-6-12] Length = 153 Score = 58.6 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 32/77 (41%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 E YEKA E + +A E + + +D+P + A + A Y++A Sbjct: 62 KTPDEEAYEKARDLYYEGKYKEAIEAYRKFLKDYPKSEYADDAQYEIALCYEFTEDYKKA 121 Query: 114 ASLGEEYITQYPESKNV 130 E+ I YP S+ V Sbjct: 122 IEEYEKLIKNYPNSEYV 138 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 8/83 (9%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y GKY++A +++ YP+S+ D Y + + Y K ++ + Sbjct: 76 YYEGKYKEAIEAYRKFLKDYPKSEYADDAQYEIALCYEFT--------EDYKKAIEEYEK 127 Query: 165 IVERYTNSPYVKGARFYVTVGRN 187 +++ Y NS YV+ A+ + + Sbjct: 128 LIKNYPNSEYVEAAKSSIEYLKE 150 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 14/74 (18%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 K ++ + ++ Y S Y A++ + + Y +Y AI ++ Sbjct: 82 KEAIEAYRKFLKDYPKSEYADDAQYEIALC--------------YEFTEDYKKAIEEYEK 127 Query: 216 VLANYSDAEHAEEA 229 ++ NY ++E+ E A Sbjct: 128 LIKNYPNSEYVEAA 141 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 27/59 (45%) Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 G+Y AI ++ L +Y +E+A++A + Y +A E + + YP + Sbjct: 79 GKYKEAIEAYRKFLKDYPKSEYADDAQYEIALCYEFTEDYKKAIEEYEKLIKNYPNSEY 137 >gi|28871115|ref|NP_793734.1| hypothetical protein PSPTO_3970 [Pseudomonas syringae pv. tomato str. DC3000] gi|28854365|gb|AAO57429.1| conserved protein of unknown function [Pseudomonas syringae pv. tomato str. DC3000] Length = 272 Score = 58.6 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 145 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 204 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 205 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 256 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 257 PGTSAAQLAQRDLQRL 272 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 160 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 206 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 207 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 260 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 261 AAQLAQRDLQ 270 >gi|251772666|gb|EES53230.1| TPR domain-containing protein [Leptospirillum ferrodiazotrophum] Length = 277 Score = 58.6 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 50/128 (39%), Gaps = 8/128 (6%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 +Y +A + ++ A F++ +++P + +A ++ A Y+ Y++A Sbjct: 151 TESPDMIYHQAYADYQAGHYDIAISEFDRLVKEYPDSHLASSAVFWEAQSHYNLKHYKRA 210 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 +L + I +Y +S YY G Y ++ K ++ R++E + Sbjct: 211 LALYDAVIHKYVDSPKKATSYYKKGQVYEKL--------GNKKAAVKSYKRVLELFPLEQ 262 Query: 174 YVKGARFY 181 + Sbjct: 263 QLDDLSKR 270 >gi|29348225|ref|NP_811728.1| TPR domain-containing protein [Bacteroides thetaiotaomicron VPI-5482] gi|29340128|gb|AAO77922.1| TPR domain-containing protein [Bacteroides thetaiotaomicron VPI-5482] Length = 1003 Score = 58.6 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 81/280 (28%), Gaps = 60/280 (21%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K I ++ C + Q+S + +Y++ +E+N++ A Sbjct: 1 MKKRISRIICTLLCCAPIAISAQTSEKI--------TSPVNLYKEGKELFQEKNYAAAIP 52 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + P A + + + M Y + L +Y+ YP++ + +Y L+ Sbjct: 53 ALKAFVKQKPTASLLQDAEYMLVSSAYELKDKNR-IELLRKYLDCYPDTPYANRIYSLLA 111 Query: 139 MSYA-----------------QMIRDVPYDQR------------ATKLMLQYMSRIVERY 169 Y ++ + D R K + + Sbjct: 112 SCYFYEGKYDEALALFNSTRLDLLGNEERDDRTYQLATCYMKTDNLKEAAIWFETLRASS 171 Query: 170 TNSPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKRGEYVAA 209 Y K +Y+ R + I Y + Y A Sbjct: 172 P--KYAKDCSYYLAYIRYTQKRYDEALKDFLPLQDDPKYKELVPYYIAEIYAIKKNYDKA 229 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 Q L+ Y + EHA E L +AY +A E Sbjct: 230 QIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEA 269 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 72/207 (34%), Gaps = 28/207 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y + +++++A YF + + +A + + +++A Sbjct: 513 YNLGYIAFHRKDYTQASNYFQKYIQLEKGENRTALA-DAYNRIGDCHLNVRNFEEAKHYY 571 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + + + DY +Y + + + ++R+V +Y +SPY Sbjct: 572 SQAEQMN--TPSGDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPSSPYAVN 621 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A E GR Y+ AI F+ +L Y ++ + +A A + Y Sbjct: 622 AI--------------YEKGRSYVLMDNNSQAITSFKELLEKYPESPVSRKAAAEIGLLY 667 Query: 238 VALALMDEAREVVSLIQERYPQGYWAR 264 D+A + E+YP AR Sbjct: 668 YQNGNFDQAINAYKQVIEKYPGSEEAR 694 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 81/236 (34%), Gaps = 45/236 (19%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + +YEK ++ N S+A F + +P + V+RK+ + Y G + Sbjct: 614 PSSPYAVNAIYEKGRSYVLMDNNSQAITSFKELLEKYPESPVSRKAAAEIGLLYYQNGNF 673 Query: 111 QQAASLGEEYITQYPESKNVDYVY------YL--------VGMSYAQ----MIRDVPYD- 151 QA + ++ I +YP S+ Y+ ++ A D Sbjct: 674 DQAINAYKQVIEKYPGSEEARLAMRDMKSIYVDLNRIDEFAALANAMPGHIRFDASEQDS 733 Query: 152 -----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 + T+ +++ ++ + + A +Y+ N+ ++ + Sbjct: 734 LTYAAAEKIYARGRTEEAKSSLNKYLQTFPEGAFSLNAHYYLCQIGNEQKNYDMVL---- 789 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 L G+ L Y + AEEA+ E M EA +++E+ Sbjct: 790 LHSGK-----------LLEYPNNPFAEEALIMRAEVQFNQQQMAEALASYKMLKEK 834 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 45/125 (36%), Gaps = 8/125 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A++ +++++ N+ +P + A ++ QA + +E Sbjct: 587 YQLALVSGLQKDYTGKITLLNRLVGKYPSSPYAVNAIYEKGRSYVLMDNNSQAITSFKEL 646 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +YPES +G+ Y Q + +++E+Y S + A Sbjct: 647 LEKYPESPVSRKAAAEIGLLYYQN--------GNFDQAINAYKQVIEKYPGSEEARLAMR 698 Query: 181 YVTVG 185 + Sbjct: 699 DMKSI 703 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 65/218 (29%), Gaps = 70/218 (32%) Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE----------------------YI--- 121 +P A ++L+M A VQ++ + +A + + ++ Sbjct: 798 YPNNPFAEEALIMRAEVQFNQQQMAEALASYKMLKEKATNVERRQLAETGILRCAFLLRD 857 Query: 122 ---------------TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 PE KN Y +Y Q+A K L + Sbjct: 858 DVETIHAATEVLAEAKLSPELKN--EALYYRAKAYKN--------QKADKKALDDFRELA 907 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + NS Y A+ ++ + EY AA + HA Sbjct: 908 KDTRNS-YGAEAK--------------YQVAQALYDAKEYAAAEKELLNYIE--QSTPHA 950 Query: 227 E---EAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + L + YVA+ +AR+ + +Q+ Y Sbjct: 951 YWLARSFVLLSDVYVAMGKDLDARQYLLSLQQNYQGND 988 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 81/233 (34%), Gaps = 38/233 (16%) Query: 50 SVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 + D +E+ Y A ++ ++N+ KA +P A + + Y Sbjct: 201 PLQDDPKYKELVPYYIAEIYAIKKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHF 260 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G+Y QA Y+ + + D Y++G+SY Q + + + ++ Sbjct: 261 GQYHQAVEAFTGYLDRDHSAPRRD-ALYMLGLSYYQT--------KVYSKAAEMLGQVTT 311 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKE---------------VEI---GRYYLKR------ 203 N + A ++ + QLA K ++I Y Sbjct: 312 A--NDALTQNAYLHMGLSYLQLAEKNKARMAFEQAAASNANLQIKEQAAYNYALCLHETS 369 Query: 204 -GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + ++ F+ L + + +AE+ LVE Y+ + A + + I + Sbjct: 370 YSAFGESVTAFEKFLNEFPTSPYAEKVSNYLVEVYINTRSYEAALKSIERIAK 422 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 73/236 (30%), Gaps = 40/236 (16%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115 +++ NF +A +Y NQ R++ + + Y + +AA Sbjct: 435 LFQLGTQSFANANFEQALQYLNQSITI---GQYNRQTKADAYYWCGESYYRLNRMMEAAR 491 Query: 116 LGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV--ERYTN 171 Y+ P ++ + ++ + + + ++ Y + + E+ N Sbjct: 492 DFNAYLQLTTQPNNE-------MYALANYNL-GYIAFHRKDYTQASNYFQKYIQLEKGEN 543 Query: 172 SPYVKGARFYVTVGRNQL-----AAKEVEIGR----------YYLK------RGEYVAAI 210 + A + + A +Y + +Y I Sbjct: 544 RTALADAYNRIGDCHLNVRNFEEAKHYYSQAEQMNTPSGDYSFYQLALVSGLQKDYTGKI 603 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 ++ Y + +A A+ +YV + +A + E+YP+ +R Sbjct: 604 TLLNRLVGKYPSSPYAVNAIYEKGRSYVLMDNNSQAITSFKELLEKYPESPVSRKA 659 Score = 35.1 bits (80), Expect = 9.5, Method: Composition-based stats. Identities = 22/172 (12%), Positives = 50/172 (29%), Gaps = 22/172 (12%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 YLD + +Y + + + + +SKA E Q + + + + L Sbjct: 273 YLDRDHSAPRRDALYMLGLSYYQTKVYSKAAEMLGQVTT--ANDALTQNAYLHMGLSYLQ 330 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 + +A E+ + + Y + + A + + + Sbjct: 331 LAEKNKARMAFEQAAASNANLQIKEQAAYNYALCLHETSYS------AFGESVTAFEKFL 384 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + SPY + Y+ Y+ Y AA+ + + Sbjct: 385 NEFPTSPYAEKVSNYLVEV--------------YINTRSYEAALKSIERIAK 422 >gi|317402472|gb|EFV83040.1| periplasmic protein [Achromobacter xylosoxidans C54] Length = 230 Score = 58.6 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 48/137 (35%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + ++ Y+ A+ ++ + +A E + +P + +A + +Y+ Sbjct: 102 ATAGDPQEQAAYDGAIDLFRKGQYKEASESLAAFTALYPASQLAPSAQFYLGSSRYALKD 161 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 ++ A + + P++ ++ S +M + RIV Y Sbjct: 162 FKGAIEQLNAMVQKAPDNARAPDALLVIAGSQIEMNNRAG--------AKTTLQRIVRDY 213 Query: 170 TNSPYVKGARFYVTVGR 186 +P A+ + + + Sbjct: 214 PTTPAANTAKSRLQLLQ 230 Score = 38.9 bits (90), Expect = 0.83, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 40/116 (34%), Gaps = 14/116 (12%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 K + ++ Y S A+FY+ R L ++ AI + Sbjct: 126 KEASESLAAFTALYPASQLAPSAQFYLGSSRYAL--------------KDFKGAIEQLNA 171 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++ D A +A+ + + + + A+ + I YP A ++ ++ Sbjct: 172 MVQKAPDNARAPDALLVIAGSQIEMNNRAGAKTTLQRIVRDYPTTPAANTAKSRLQ 227 >gi|148270125|ref|YP_001244585.1| TPR repeat-containing protein [Thermotoga petrophila RKU-1] gi|147735669|gb|ABQ47009.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga petrophila RKU-1] Length = 357 Score = 58.6 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 85/239 (35%), Gaps = 41/239 (17%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 LD + E+ K L +++ + ++ ++ P ++ Y+ Sbjct: 124 LDIDENYAPAYEL--KGSLLVEQGKIEEGIKFLDKAVEIDP---WLVQAYASLGEAYYNL 178 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G Y++A E + P K Y+++ +Y +M R L ++ + R++E Sbjct: 179 GDYEKAIHYWERELEYNPNDKIT---YFMITEAYYEMNRK--------DLAVKALERLLE 227 Query: 168 RYTNS-----------------PYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAA 209 ++ + + + + E+E R LK G Y Sbjct: 228 IDPDNIPALYQLSQLYRELGNEEKAREMEEKIMNCKPK-YPTELEPWARVMLKHGRYKEV 286 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + ++ + + A LV YV L +D+ARE++ I + +W Y + Sbjct: 287 AEELEKIVES---SPLNTLARLLLVVPYVKLGQIDKAREILDDIGQN---NFWYYYGKK 339 >gi|225024318|ref|ZP_03713510.1| hypothetical protein EIKCOROL_01193 [Eikenella corrodens ATCC 23834] gi|224942903|gb|EEG24112.1| hypothetical protein EIKCOROL_01193 [Eikenella corrodens ATCC 23834] Length = 221 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 45/129 (34%), Gaps = 10/129 (7%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 Q + Y++A+ + +S+A + R + + +L + + Sbjct: 99 PQEQAYQQALQLYRSGLYSQALQQLRFAERSGSGSRTEQNALFLLMQSHEKLRNCESVIL 158 Query: 116 LGEEYITQYPESKNVDYVYYLVGMS-YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 G+ + T++ + Y VG + RD+ ++++ Y NSP Sbjct: 159 TGQRFATRFAANPKAAEALYSVGSCQWGMQQRDIAR---------VTWRKLIQTYPNSPA 209 Query: 175 VKGARFYVT 183 + A + Sbjct: 210 ARRAGQRIQ 218 >gi|110598525|ref|ZP_01386794.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031] gi|110339829|gb|EAT58335.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031] Length = 261 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 57/142 (40%), Gaps = 8/142 (5%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 +SS T++ ++++ ++ V+ ++++S A E F + + +P + + + Sbjct: 127 KSSAVTDTLKTTEISPEKKLLDEGVVLFGKKSYSAARESFGKLIQGYPKSPLLSDAQFYL 186 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A + +++A + I +Y +S + + + ++ T Sbjct: 187 AESYFLEKWFEKAILEYQVVIAKYTKSSKRPAALFKQAICFEKI--------GDTASAKA 238 Query: 161 YMSRIVERYTNSPYVKGARFYV 182 S +V Y SP K A+ + Sbjct: 239 RYSSLVSVYPASPEAKLAKKKL 260 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 39/112 (34%), Gaps = 14/112 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + ++++ Y SP + A+ + Y + AI +Q+V Sbjct: 161 AARESFGKLIQGYPKSPLLSDAQ--------------FYLAESYFLEKWFEKAILEYQVV 206 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 +A Y+ + A+ + + + A+ S + YP A+ + Sbjct: 207 IAKYTKSSKRPAALFKQAICFEKIGDTASAKARYSSLVSVYPASPEAKLAKK 258 >gi|253569409|ref|ZP_04846819.1| TPR domain-containing protein [Bacteroides sp. 1_1_6] gi|251841428|gb|EES69509.1| TPR domain-containing protein [Bacteroides sp. 1_1_6] Length = 1003 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 81/280 (28%), Gaps = 60/280 (21%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K I ++ C + Q+S + +Y++ +E+N++ A Sbjct: 1 MKKRISRIICTLLCCAPIAISAQTSEKI--------TSPVNLYKEGKELFQEKNYAAAIP 52 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + P A + + + M Y + L +Y+ YP++ + +Y L+ Sbjct: 53 ALKAFVKQKPTASLLQDAEYMLVSSAYELKDKNR-IELLRKYLDCYPDTPYANRIYSLLA 111 Query: 139 MSYA-----------------QMIRDVPYDQR------------ATKLMLQYMSRIVERY 169 Y ++ + D R K + + Sbjct: 112 SCYFYEGKYDEALALFNSTRLDLLGNEERDDRTYQLATCYMKTDNLKEAAIWFETLRASS 171 Query: 170 TNSPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKRGEYVAA 209 Y K +Y+ R + I Y + Y A Sbjct: 172 P--KYAKDCSYYLAYIRYTQKRYDEALKDFLPLQDDPKYKELVPYYIAEIYAIKKNYDKA 229 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 Q L+ Y + EHA E L +AY +A E Sbjct: 230 QIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEA 269 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 72/207 (34%), Gaps = 28/207 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y + +++++A YF + + +A + + +++A Sbjct: 513 YNLGYIAFHRKDYTQASNYFQKYIQLEKGENRTALA-DAYNRIGDCHLNVRNFEEAKHYY 571 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + + + DY +Y + + + ++R+V +Y +SPY Sbjct: 572 SQAEQMN--TPSGDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPSSPYAVN 621 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A E GR Y+ AI F+ +L Y ++ + +A A + Y Sbjct: 622 AI--------------YEKGRSYVLMDNNGQAITSFKELLEKYPESPVSRKAAAEIGLLY 667 Query: 238 VALALMDEAREVVSLIQERYPQGYWAR 264 D+A + E+YP AR Sbjct: 668 YQNGNFDQAINAYKQVIEKYPGSEEAR 694 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 80/236 (33%), Gaps = 45/236 (19%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + +YEK ++ N +A F + +P + V+RK+ + Y G + Sbjct: 614 PSSPYAVNAIYEKGRSYVLMDNNGQAITSFKELLEKYPESPVSRKAAAEIGLLYYQNGNF 673 Query: 111 QQAASLGEEYITQYPESKNVDYVY------YL--------VGMSYAQ----MIRDVPYD- 151 QA + ++ I +YP S+ Y+ ++ A D Sbjct: 674 DQAINAYKQVIEKYPGSEEARLAMRDMKSIYVDLNRIDEFAALANAMPGHIRFDASEQDS 733 Query: 152 -----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 + T+ +++ ++ + + A +Y+ N+ ++ + Sbjct: 734 LTYAAAEKIYARGRTEEAKSSLNKYLQTFPEGAFSLNAHYYLCQIGNEQKNYDMVL---- 789 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 L G+ L Y + AEEA+ E M EA +++E+ Sbjct: 790 LHSGK-----------LLEYPNNPFAEEALIMRAEVQFNQQQMAEALASYKMLKEK 834 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 45/125 (36%), Gaps = 8/125 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A++ +++++ N+ +P + A ++ QA + +E Sbjct: 587 YQLALVSGLQKDYTGKITLLNRLVGKYPSSPYAVNAIYEKGRSYVLMDNNGQAITSFKEL 646 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +YPES +G+ Y Q + +++E+Y S + A Sbjct: 647 LEKYPESPVSRKAAAEIGLLYYQN--------GNFDQAINAYKQVIEKYPGSEEARLAMR 698 Query: 181 YVTVG 185 + Sbjct: 699 DMKSI 703 Score = 40.5 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 65/218 (29%), Gaps = 70/218 (32%) Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE----------------------YI--- 121 +P A ++L+M A VQ++ + +A + + ++ Sbjct: 798 YPNNPFAEEALIMRAEVQFNQQQMAEALASYKMLKEKATNVERRQLAETGILRCAFLLRD 857 Query: 122 ---------------TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 PE KN Y +Y Q+A K L + Sbjct: 858 DVETIHAATEVLAEAKLSPELKN--EALYYRAKAYKN--------QKADKKALDDFRELA 907 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + NS Y A+ ++ + EY AA + HA Sbjct: 908 KDTRNS-YGAEAK--------------YQVAQALYDAKEYAAAEKELLNYIE--QSTPHA 950 Query: 227 E---EAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + L + YVA+ +AR+ + +Q+ Y Sbjct: 951 YWLARSFVLLSDVYVAMGKDLDARQYLLSLQQNYQGND 988 Score = 38.9 bits (90), Expect = 0.83, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 81/233 (34%), Gaps = 38/233 (16%) Query: 50 SVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 + D +E+ Y A ++ ++N+ KA +P A + + Y Sbjct: 201 PLQDDPKYKELVPYYIAEIYAIKKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHF 260 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G+Y QA Y+ + + D Y++G+SY Q + + + ++ Sbjct: 261 GQYHQAVEAFTGYLDRDHSAPRRD-ALYMLGLSYYQT--------KVYSKAAEMLGQVTT 311 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKE---------------VEI---GRYYLKR------ 203 N + A ++ + QLA K ++I Y Sbjct: 312 A--NDALTQNAYLHMGLSYLQLAEKNKARMAFEQAAASNANLQIKEQAAYNYALCLHETS 369 Query: 204 -GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + ++ F+ L + + +AE+ LVE Y+ + A + + I + Sbjct: 370 YSAFGESVTAFEKFLNEFPTSPYAEKVSNYLVEVYMNTRSYEAALKSIERIAK 422 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 73/236 (30%), Gaps = 40/236 (16%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115 +++ NF +A +Y NQ R++ + + Y + +AA Sbjct: 435 LFQLGTQSFANANFEQALQYLNQSIAI---GQYNRQTKADAYYWCGESYYRLNRMMEAAR 491 Query: 116 LGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV--ERYTN 171 Y+ P ++ + ++ + + + ++ Y + + E+ N Sbjct: 492 DFNAYLQLTTQPNNE-------MYALANYNL-GYIAFHRKDYTQASNYFQKYIQLEKGEN 543 Query: 172 SPYVKGARFYVTVGRNQL-----AAKEVEIGR----------YYLK------RGEYVAAI 210 + A + + A +Y + +Y I Sbjct: 544 RTALADAYNRIGDCHLNVRNFEEAKHYYSQAEQMNTPSGDYSFYQLALVSGLQKDYTGKI 603 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 ++ Y + +A A+ +YV + +A + E+YP+ +R Sbjct: 604 TLLNRLVGKYPSSPYAVNAIYEKGRSYVLMDNNGQAITSFKELLEKYPESPVSRKA 659 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 22/172 (12%), Positives = 50/172 (29%), Gaps = 22/172 (12%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 YLD + +Y + + + + +SKA E Q + + + + L Sbjct: 273 YLDRDHSAPRRDALYMLGLSYYQTKVYSKAAEMLGQVTT--ANDALTQNAYLHMGLSYLQ 330 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 + +A E+ + + Y + + A + + + Sbjct: 331 LAEKNKARMAFEQAAASNANLQIKEQAAYNYALCLHETSYS------AFGESVTAFEKFL 384 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + SPY + Y+ Y+ Y AA+ + + Sbjct: 385 NEFPTSPYAEKVSNYLVEV--------------YMNTRSYEAALKSIERIAK 422 >gi|330877971|gb|EGH12120.1| tol-pal system protein YbgF [Pseudomonas syringae pv. glycinea str. race 4] Length = 253 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 126 EPPDPTKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 185 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 186 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 237 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 238 PGTSAAQLAQRDLQRL 253 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 141 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 187 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 188 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 241 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 242 AAQLAQRDLQ 251 >gi|270159823|ref|ZP_06188479.1| tetratricopeptide repeat protein [Legionella longbeachae D-4968] gi|289165419|ref|YP_003455557.1| hypothetical protein LLO_2086 [Legionella longbeachae NSW150] gi|269988162|gb|EEZ94417.1| tetratricopeptide repeat protein [Legionella longbeachae D-4968] gi|288858592|emb|CBJ12473.1| putative conserved hypothetical protein [Legionella longbeachae NSW150] Length = 318 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 59/150 (39%), Gaps = 25/150 (16%) Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P + + Y ++ ++I++ YD + M+ V++Y Y A+++ Sbjct: 192 RANPADEQISY------LAAYELIKNKRYD-----DAITAMNVFVQKYPKGGYTANAQYW 240 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 + G YL + +Y +I F VL + + + +M ++ AY Sbjct: 241 L--------------GELYLVKKDYSKSIEHFNTVLQQFPTSSKSAASMLKVGYAYAEQG 286 Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271 EA++ + + YP A+ + ++ Sbjct: 287 NKQEAKKFLQQVVRAYPNTPTAQLASSKLR 316 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 8/125 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A +K + + A N + +P G + + Y ++ Sbjct: 202 YLAAYELIKNKRYDDAITAMNVFVQKYPKGGYTANAQYWLGELYLVKKDYSKSIEHFNTV 261 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + Q+P S VG +YA+ Q + +++ ++V Y N+P + A Sbjct: 262 LQQFPTSSKSAASMLKVGYAYAE--------QGNKQEAKKFLQQVVRAYPNTPTAQLASS 313 Query: 181 YVTVG 185 + Sbjct: 314 KLRTI 318 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 18/136 (13%), Positives = 45/136 (33%), Gaps = 22/136 (16%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 + ++A+ +Y A + ++ +YP+ Y +G Y + Sbjct: 198 EQISYLAAYELIKNKRYDDAITAMNVFVQKYPKGGYTANAQYWLGELYLVK--------K 249 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 +++ + +++++ S + V Y ++G A Sbjct: 250 DYSKSIEHFNTVLQQFPTSSKSAASMLKVGYA--------------YAEQGNKQEAKKFL 295 Query: 214 QLVLANYSDAEHAEEA 229 Q V+ Y + A+ A Sbjct: 296 QQVVRAYPNTPTAQLA 311 >gi|54297970|ref|YP_124339.1| hypothetical protein lpp2025 [Legionella pneumophila str. Paris] gi|53751755|emb|CAH13177.1| hypothetical protein lpp2025 [Legionella pneumophila str. Paris] Length = 322 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 25/140 (17%) Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P + + Y ++ +++++ YD ++ M V++Y Y A Sbjct: 193 RANPADEQISY------LAAYELVKNKRYD-----EAIKSMQIFVQKYPRGGYTANA--- 238 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 E +G YL + +Y AI F++VL Y + A ++ + AY Sbjct: 239 -----------EYWLGELYLVKKDYSKAIEHFEIVLQQYPSSSKAAASLLKSGYAYAEKG 287 Query: 242 LMDEAREVVSLIQERYPQGY 261 EA++ + + YP Sbjct: 288 DKQEAKKRFQQVVKTYPDTP 307 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 8/151 (5%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G + V S + ++ Y A +K + + +A + + +P G Sbjct: 178 TGSSNSKPQPVVAVSRANPADEQISYLAAYELVKNKRYDEAIKSMQIFVQKYPRGGYTAN 237 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + + Y +A E + QYP S G +YA+ Sbjct: 238 AEYWLGELYLVKKDYSKAIEHFEIVLQQYPSSSKAAASLLKSGYAYAEK--------GDK 289 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + + ++V+ Y ++P + A + Sbjct: 290 QEAKKRFQQVVKTYPDTPTAQLASSKLEAIN 320 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 47/136 (34%), Gaps = 22/136 (16%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 + ++A+ +Y +A + ++ +YP Y +G Y + Sbjct: 199 EQISYLAAYELVKNKRYDEAIKSMQIFVQKYPRGGYTANAEYWLGELYLVK--------K 250 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 +++ ++++Y +S + Y ++G+ A RF Sbjct: 251 DYSKAIEHFEIVLQQYPSSSKAAASLLKSGYA--------------YAEKGDKQEAKKRF 296 Query: 214 QLVLANYSDAEHAEEA 229 Q V+ Y D A+ A Sbjct: 297 QQVVKTYPDTPTAQLA 312 >gi|78776614|ref|YP_392929.1| DNA uptake lipoprotein-like [Sulfurimonas denitrificans DSM 1251] gi|78497154|gb|ABB43694.1| DNA uptake lipoprotein-like protein [Sulfurimonas denitrificans DSM 1251] Length = 286 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 56/152 (36%), Gaps = 4/152 (2%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K V + + A Y++ + + + ++ +M + +Y + +EY Sbjct: 36 YTKIVEHVSNGDLESADNYYSSLQGEHIGSPLLPEATMMLSIAHMQEEEYLLSEHFLDEY 95 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I +Y + +L + + + + DQ + + + Y +S Y + Sbjct: 96 IKRYATPNEKENAEFLKIKAKYKALPNPRRDQVLIEEAIAQGELFKQAYPDSMYYEVVNT 155 Query: 181 YVTVGRNQLAAKEV--EIGRYYLKRGEYVAAI 210 +T LA + EI Y + + +A+ Sbjct: 156 MLTRLY--LAQFVLNEEISDLYDRLDKPKSAL 185 >gi|260429456|ref|ZP_05783433.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45] gi|260420079|gb|EEX13332.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45] Length = 281 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 14/125 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + +A L +F A + F + FP + + +LL G ++A + Sbjct: 162 FRRAQEALASGDFQSAADQFASFRQTFPGSPLEPAALLGEGKALADVGNTREA---ARRF 218 Query: 121 ITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + YPES + +G S + + +S + RY S V Sbjct: 219 LDTYANYPESDAAPEALWRLGASLGAL--------GSVSEACVTLSEVSARYPGSASVTD 270 Query: 178 ARFYV 182 A+ + Sbjct: 271 AQAEM 275 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 46/119 (38%), Gaps = 19/119 (15%) Query: 147 DVPYDQRA-----TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 D Q A + + + + SP A + G+ LA ++G Sbjct: 161 DFRRAQEALASGDFQSAADQFASFRQTFPGSPLEPAAL--LGEGK-ALA----DVGN--- 210 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 R A RF ANY +++ A EA+ RL + AL + EA +S + RYP Sbjct: 211 TRE----AARRFLDTYANYPESDAAPEALWRLGASLGALGSVSEACVTLSEVSARYPGS 265 >gi|301062461|ref|ZP_07203112.1| tol-pal system protein YbgF [delta proteobacterium NaphS2] gi|300443435|gb|EFK07549.1| tol-pal system protein YbgF [delta proteobacterium NaphS2] Length = 285 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 54/141 (38%), Gaps = 8/141 (5%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 + + +++YE + +++ + + F +++P + +A + Sbjct: 153 AQPEPEIKIPADQKLYEVNMDLYRKEKYDDSIVGFKTFLKEYPKSKLADNAAFWIGESHM 212 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + +Y+QA ++ I QYP+ V +++ ++ + ++ Sbjct: 213 ALKQYEQAILAFQKVIKQYPKGNKVPNALLRQALAFDELNDKTS--------AKLLLKKL 264 Query: 166 VERYTNSPYVKGARFYVTVGR 186 +++Y S K A+ + + Sbjct: 265 IKQYPKSNEAKIAKNKLKKMK 285 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 39/110 (35%), Gaps = 14/110 (12%) Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 ++ Y S A F++ L +Y AI FQ V+ Y Sbjct: 187 FKTFLKEYPKSKLADNAAFWIGESHMAL--------------KQYEQAILAFQKVIKQYP 232 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 A+ R A+ L A+ ++ + ++YP+ A+ + +K Sbjct: 233 KGNKVPNALLRQALAFDELNDKTSAKLLLKKLIKQYPKSNEAKIAKNKLK 282 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 8/85 (9%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y KY + + ++ +YP+SK D + +G S+ + + + + + Sbjct: 175 YRKEKYDDSIVGFKTFLKEYPKSKLADNAAFWIGESHMAL--------KQYEQAILAFQK 226 Query: 165 IVERYTNSPYVKGARFYVTVGRNQL 189 ++++Y V A + ++L Sbjct: 227 VIKQYPKGNKVPNALLRQALAFDEL 251 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 32/61 (52%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 ++ +Y +I F+ L Y ++ A+ A + E+++AL ++A + ++YP+G Sbjct: 175 YRKEKYDDSIVGFKTFLKEYPKSKLADNAAFWIGESHMALKQYEQAILAFQKVIKQYPKG 234 Query: 261 Y 261 Sbjct: 235 N 235 >gi|170723152|ref|YP_001750840.1| tol-pal system protein YbgF [Pseudomonas putida W619] gi|169761155|gb|ACA74471.1| tol-pal system protein YbgF [Pseudomonas putida W619] Length = 271 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 51/136 (37%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ Y+ A +K+++F KA + F R +P + A + V + G Sbjct: 144 EPGDPAKEKLYYDAAFDLIKQKDFDKASQAFGAFLRKYPNSQYAGNAQYWLGEVNLAKGD 203 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A+ + +YP+ V Y + DV T + + +++ +Y Sbjct: 204 LQSASQAFAQVSQKYPKHSKVPDSLYKLA--------DVERRMGHTDKVKGILQQVITQY 255 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 256 PGTSAAQLAQRDLQKL 271 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 45/120 (37%), Gaps = 14/120 (11%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q+ Q + +Y NS Y A++++ LA +++ +A Sbjct: 164 QKDFDKASQAFGAFLRKYPNSQYAGNAQYWLGEVN--LAKGDLQ------------SASQ 209 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 F V Y +++ +L + + D+ + ++ + +YP A+ + ++ Sbjct: 210 AFAQVSQKYPKHSKVPDSLYKLADVERRMGHTDKVKGILQQVITQYPGTSAAQLAQRDLQ 269 >gi|238026335|ref|YP_002910566.1| hypothetical protein bglu_1g06690 [Burkholderia glumae BGR1] gi|237875529|gb|ACR27862.1| Hypothetical protein bglu_1g06690 [Burkholderia glumae BGR1] Length = 249 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 14/120 (11%), Positives = 38/120 (31%), Gaps = 8/120 (6%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T + + + A + +F A F +P + + QY+ Sbjct: 121 EGTVQPGETDAFNAASQQFRSGDFKGAAASFRAFIAKYPQSPYQPVAQYWLGNAQYALRD 180 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ + + + + YP+ +G + Q+A + +++ ++ Sbjct: 181 YKGSTATWQALVKAYPQHPRAGDALVAIG------TNQLEQGQKAA--AKRTFEQVLSQF 232 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 22/119 (18%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Q+ +G ++ AA+ +I +YP+S Y +G + + D + + Q Sbjct: 138 QFRSGDFKGAAASFRAFIAKYPQSPYQPVAQYWLGNAQYAL-----RDYKGSTATWQA-- 190 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 +V+ Y P A V IG L++G+ AA F+ VL+ + Sbjct: 191 -LVKAYPQHPRAGDAL--------------VAIGTNQLEQGQKAAAKRTFEQVLSQFQG 234 Score = 35.5 bits (81), Expect = 7.2, Method: Composition-based stats. Identities = 13/107 (12%), Positives = 33/107 (30%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y SPY A++++ A + +Y + Sbjct: 142 GDFKGAAASFRAFIAKYPQSPYQPVAQYWLGN-----AQYAL---------RDYKGSTAT 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +Q ++ Y A +A+ + + A+ + ++ Sbjct: 188 WQALVKAYPQHPRAGDALVAIGTNQLEQGQKAAAKRTFEQVLSQFQG 234 Score = 35.5 bits (81), Expect = 8.1, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 23/59 (38%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + G++ A F+ +A Y + + A L A AL + + + YPQ Sbjct: 139 FRSGDFKGAAASFRAFIAKYPQSPYQPVAQYWLGNAQYALRDYKGSTATWQALVKAYPQ 197 >gi|325274585|ref|ZP_08140641.1| tol-pal system protein YbgF [Pseudomonas sp. TJI-51] gi|324100227|gb|EGB98017.1| tol-pal system protein YbgF [Pseudomonas sp. TJI-51] Length = 268 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 51/136 (37%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ Y+ A +K+++F KA + F R +P + A + V + G Sbjct: 141 EPGDPAKEKLYYDAAFDLIKQKDFDKASQAFTAFLRKYPNSQYAGNAQYWLGEVNLAKGD 200 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A+ + +YP+ V Y + DV T + + +++ +Y Sbjct: 201 LQGASQAFAQVSQKYPKHSKVPDSLYKLA--------DVERRMGHTDKVKSILQQVITQY 252 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 253 PGTSAAQLAQRDLQKL 268 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 45/120 (37%), Gaps = 14/120 (11%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q+ Q + + +Y NS Y A++++ LA +++ A Sbjct: 161 QKDFDKASQAFTAFLRKYPNSQYAGNAQYWLGEVN--LAKGDLQ------------GASQ 206 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 F V Y +++ +L + + D+ + ++ + +YP A+ + ++ Sbjct: 207 AFAQVSQKYPKHSKVPDSLYKLADVERRMGHTDKVKSILQQVITQYPGTSAAQLAQRDLQ 266 >gi|237800228|ref|ZP_04588689.1| tol-pal system protein YbgF [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806416|ref|ZP_04593120.1| tol-pal system protein YbgF [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023085|gb|EGI03142.1| tol-pal system protein YbgF [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027529|gb|EGI07584.1| tol-pal system protein YbgF [Pseudomonas syringae pv. oryzae str. 1_6] Length = 252 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 125 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 184 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 185 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 236 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 237 PGTSAAQLAQRDLQRL 252 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 140 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 186 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 187 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 240 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 241 AAQLAQRDLQ 250 >gi|148359616|ref|YP_001250823.1| outer membrane protein [Legionella pneumophila str. Corby] gi|296107658|ref|YP_003619359.1| outer membrane protein [Legionella pneumophila 2300/99 Alcoy] gi|148281389|gb|ABQ55477.1| outer membrane protein [Legionella pneumophila str. Corby] gi|295649560|gb|ADG25407.1| outer membrane protein [Legionella pneumophila 2300/99 Alcoy] Length = 322 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 25/140 (17%) Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P + + Y ++ +++++ YD ++ M V++Y Y A Sbjct: 193 RANPADEQISY------LAAYELVKNKRYD-----EAIKSMQIFVQKYPRGGYTANA--- 238 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 E +G YL + +Y AI F++VL Y + A ++ + AY Sbjct: 239 -----------EYWLGELYLVKKDYSKAIEHFEIVLQQYPSSSKAAASLLKSGYAYAEKG 287 Query: 242 LMDEAREVVSLIQERYPQGY 261 EA++ + + YP Sbjct: 288 DKQEAKKRFQQVVKTYPDTP 307 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 8/151 (5%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G + V S + ++ Y A +K + + +A + + +P G Sbjct: 178 AGSSNSKPQPVVAVSRANPADEQISYLAAYELVKNKRYDEAIKSMQIFVQKYPRGGYTAN 237 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + + Y +A E + QYP S G +YA+ Sbjct: 238 AEYWLGELYLVKKDYSKAIEHFEIVLQQYPSSSKAAASLLKSGYAYAEK--------GDK 289 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + + ++V+ Y ++P + A + Sbjct: 290 QEAKKRFQQVVKTYPDTPTAQLASSKLEAIN 320 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 47/136 (34%), Gaps = 22/136 (16%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 + ++A+ +Y +A + ++ +YP Y +G Y + Sbjct: 199 EQISYLAAYELVKNKRYDEAIKSMQIFVQKYPRGGYTANAEYWLGELYLVK--------K 250 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 +++ ++++Y +S + Y ++G+ A RF Sbjct: 251 DYSKAIEHFEIVLQQYPSSSKAAASLLKSGYA--------------YAEKGDKQEAKKRF 296 Query: 214 QLVLANYSDAEHAEEA 229 Q V+ Y D A+ A Sbjct: 297 QQVVKTYPDTPTAQLA 312 >gi|254516701|ref|ZP_05128760.1| tetratricopeptide TPR_2 repeat protein [gamma proteobacterium NOR5-3] gi|219675124|gb|EED31491.1| tetratricopeptide TPR_2 repeat protein [gamma proteobacterium NOR5-3] Length = 304 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 42/126 (33%), Gaps = 12/126 (9%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 V + + E Y A ++ Q F +A F FP A + Y Sbjct: 174 EVAEQPGEGEAYRAAYALVRGQEFDQAVSAFTAFLERFPAGRYAPNAHYWLGE-LYLVTD 232 Query: 110 YQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 + + ++ YP + + Y +G + D+ ++++R++ Sbjct: 233 PADPEASRQAFMLLLNQYPTNAKIPDALYKLGRVHFMKGN---RDRSR-----EFLNRVI 284 Query: 167 ERYTNS 172 Y +S Sbjct: 285 REYPDS 290 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 46/131 (35%), Gaps = 21/131 (16%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 ++R +DQ + + +ER+ Y A +++ G YL Sbjct: 189 YALVRGQEFDQ-----AVSAFTAFLERFPAGRYAPNAHYWL--------------GELYL 229 Query: 202 KRG--EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + A+ F L+L Y +A+ +L + D +RE ++ + YP Sbjct: 230 VTDPADPEASRQAFMLLLNQYPTNAKIPDALYKLGRVHFMKGNRDRSREFLNRVIREYPD 289 Query: 260 GYWARYVETLV 270 AR + Sbjct: 290 SSAARLAGDFL 300 >gi|311280378|ref|YP_003942609.1| tol-pal system protein YbgF [Enterobacter cloacae SCF1] gi|308749573|gb|ADO49325.1| tol-pal system protein YbgF [Enterobacter cloacae SCF1] Length = 263 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 9/123 (7%) Query: 61 YEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ + A F + +P + + + Y+ GK AA Sbjct: 146 YNAAIALVKDASRQDDAIAAFQSFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAFYFAS 205 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S Y VG+ + D+ T ++V +Y + K A+ Sbjct: 206 VVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQQVVSKYPGTEGAKQAQ 257 Query: 180 FYV 182 + Sbjct: 258 KRL 260 Score = 50.1 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D + +++Y +S Y A +++ Sbjct: 142 ANTDYNAAIALVKDASRQDDAIAAFQSFIKKYPDSTYQPNANYWLGQLN----------- 190 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 Y K + AA F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 191 --YNKGKKDDAAFY-FASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVVSKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTEGAKQAQK 258 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + + +I +YP+S Y +G + Y + +V+ Y Sbjct: 160 DDAIAAFQSFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAFYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A + V V +G+ A +Q V++ Y E A++A Sbjct: 212 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVVSKYPGTEGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|307579951|gb|ADN63920.1| tol-pal system protein YbgF [Xylella fastidiosa subsp. fastidiosa GB514] Length = 259 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 21/154 (13%), Positives = 49/154 (31%), Gaps = 10/154 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 + S +V+ D+ E Y A LK ++ A E F + +P + Sbjct: 112 MSEQSPNVHGDASALTISNEERIAYNVAFDALKNSKYADAAELFMSFLQLYPNGVYTPNA 171 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L Y+ + A + +++YP + A ++ Sbjct: 172 LYWLGESYYAMHDFVSAEAQFRTLLSRYPTHDKASGSLLKEALCQANQGKN--------D 223 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 + +++ +Y + + A+ + + A Sbjct: 224 AAQHSLEQVLSQYPGTDAARLAQERLQSMKLSQA 257 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + ++ Y N Y A +++ G Y ++V+A +F+ + Sbjct: 150 DAAELFMSFLQLYPNGVYTPNALYWL--------------GESYYAMHDFVSAEAQFRTL 195 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 L+ Y + A ++ + D A+ + + +YP AR + ++ Sbjct: 196 LSRYPTHDKASGSLLKEALCQANQGKNDAAQHSLEQVLSQYPGTDAARLAQERLQ 250 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 23/58 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 LK +Y A F L Y + + A+ L E+Y A+ A + RYP Sbjct: 143 LKNSKYADAAELFMSFLQLYPNGVYTPNALYWLGESYYAMHDFVSAEAQFRTLLSRYP 200 >gi|326316640|ref|YP_004234312.1| tol-pal system protein YbgF [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373476|gb|ADX45745.1| tol-pal system protein YbgF [Acidovorax avenae subsp. avenae ATCC 19860] Length = 268 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 46/132 (34%), Gaps = 8/132 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 ++ +E A+ + F A F R +P +G + QY+ Y++A Sbjct: 145 PAEKRDFEAALAVFRSGKFPDAVSAFGNFLRQYPRSGYMPSARFWLGNAQYATRDYKEAI 204 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + + + P+ +S I + + + T+ + + ++ Y S Sbjct: 205 NNFKALLAASPDHARAPEA----ALS----IANCQIELKDTRAARKTLEDLLRAYPQSEA 256 Query: 175 VKGARFYVTVGR 186 A+ + + Sbjct: 257 AAAAKERLARLK 268 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 46/143 (32%), Gaps = 22/143 (15%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A K +A + +GK+ A S ++ QYP S + + +G + Sbjct: 146 AEKRDFEAALAVFRSGKFPDAVSAFGNFLRQYPRSGYMPSARFWLGNAQYAT-------- 197 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R K + ++ + A + + +L + AA Sbjct: 198 RDYKEAINNFKALLAASPDHARAPEAALSIANCQIEL--------------KDTRAARKT 243 Query: 213 FQLVLANYSDAEHAEEAMARLVE 235 + +L Y +E A A RL Sbjct: 244 LEDLLRAYPQSEAAAAAKERLAR 266 Score = 43.2 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + +Y S Y+ ARF++ + +Y AI F+ + Sbjct: 165 DAVSAFGNFLRQYPRSGYMPSARFWLGNAQ--------------YATRDYKEAINNFKAL 210 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 LA D A EA + + L AR+ + + YPQ Sbjct: 211 LAASPDHARAPEAALSIANCQIELKDTRAARKTLEDLLRAYPQSE 255 >gi|289803195|ref|ZP_06533824.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 176 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 46/126 (36%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F + +P + + + Y+ GK AA Sbjct: 59 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 118 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S Y VG+ + D+ T +++++Y + K A+ Sbjct: 119 VVKNYPKSPKAADAMYKVGV--------IMQDKGDTDKSESGYQQVIKKYPGTDGAKQAQ 170 Query: 180 FYVTVG 185 + Sbjct: 171 KRLNAM 176 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + +++Y +S Y A +++ Sbjct: 55 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN----------- 103 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ D++ + ++Y Sbjct: 104 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTDKSESGYQQVIKKY 160 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 161 PGTDGAKQAQK 171 >gi|332884569|gb|EGK04827.1| hypothetical protein HMPREF9456_03297 [Dysgonomonas mossii DSM 22836] Length = 998 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 86/249 (34%), Gaps = 49/249 (19%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE- 119 Y A L++ + +A F SR+ A + A+ + G+Y QA + Sbjct: 142 YRMAYASLQKGDRKEAKNLFGLLSRN--SKKYAEPASYYLAYANFKEGEYDQAIATFRRL 199 Query: 120 ---------------------------------YITQYPESKNVDYVYYLVGMSYAQM-- 144 +I+ YP SKN+ VY L+G SY ++ Sbjct: 200 KSKPEYKENATFFLIQSEFLQGNMNGTISEGQDFISSYPGSKNIAEVYRLLGSSYYRLGN 259 Query: 145 ----IRDVPYDQRATKLML-QYMSRIVERYTNS-PY--VKGARFYVTVGRNQLAA-KEVE 195 IR+ + T + M ++ E Y + Y A V ++L ++ Sbjct: 260 IQSTIRNYEQYRATTSTPFREDMYQLAEAYYQTGAYGNAVEALKDVASTTDKLGQAGQML 319 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA--RLVEAYVALALMDEAREVVSLI 253 +G+ YLK + A+ F+ + D +E A+ ++ EA Sbjct: 320 LGQSYLKLNDTQNAVMAFEAAARSEFDPSISEGALYNNVMIRNRDGGGAFGEAITASQRF 379 Query: 254 QERYPQGYW 262 +YP + Sbjct: 380 LAQYPNSKY 388 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 68/192 (35%), Gaps = 24/192 (12%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + L +NFS+A Y+ Q P A S AFV Y + + + Sbjct: 550 GDINLYNRNFSEAERYYAQAVSSNP--ENADYSEFQKAFVLGLQRNYSGKVTALNSMMAK 607 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 YP S+ +D Y + ++ + + + ++++ + S + A + Sbjct: 608 YPNSQYIDDALYEKSRALVMQNKE--------QEAISVLEKMLKDHPKSNLAQKAGVQL- 658 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 G+ Y + ++ V+ANY ++E A A+ L Y + + Sbjct: 659 -------------GQLYFNTNNPRKSAEAYKQVIANYPNSEEARTAIESLEAVYKDMNDI 705 Query: 244 DEAREVVSLIQE 255 V+ + + Sbjct: 706 SSYASYVNSLGK 717 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 33/245 (13%), Positives = 74/245 (30%), Gaps = 58/245 (23%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQC-------SRDFPFAGVARKSLLMSAFVQYSAGK 109 + + + + ++ A + +++P +L A+ Q+ Sbjct: 466 NEAYFWRGDIAYRSADYGTAARDYTAYIGQASPSQKNYP------LALYNLAYAQFQDKV 519 Query: 110 YQQAASLGEEYITQ--YPESKNVDYVYYLVG--MSYAQMIRDVPY-------------DQ 152 Y A + ++YI+ +S N +G Y + + D Sbjct: 520 YSSALNNFKKYISAESNKQSPNYSDALNRIGDINLYNRNFSEAERYYAQAVSSNPENADY 579 Query: 153 RATKLML------------QYMSRIVERYTNSPYVKGA-RFYVTVGRNQLAAKEVEIGRY 199 + ++ ++ +Y NS Y+ A Q +E Sbjct: 580 SEFQKAFVLGLQRNYSGKVTALNSMMAKYPNSQYIDDALYEKSRALVMQNKEQE------ 633 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 AI + +L ++ + A++A +L + Y ++ E + YP Sbjct: 634 ---------AISVLEKMLKDHPKSNLAQKAGVQLGQLYFNTNNPRKSAEAYKQVIANYPN 684 Query: 260 GYWAR 264 AR Sbjct: 685 SEEAR 689 Score = 35.9 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 40/132 (30%), Gaps = 20/132 (15%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + T ++ ++Y+ A + + + A E + + + ++ Sbjct: 272 ATTSTPFREDMYQLAEAYYQTGAYGNAVEALKDVAST--TDKLGQAGQMLLGQSYLKLND 329 Query: 110 YQQAASLGE-----EYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Q A E E+ ++ Y MIR+ A + Sbjct: 330 TQNAVMAFEAAARSEF------DPSISEGALY-----NNVMIRNRDGG-GAFGEAITASQ 377 Query: 164 RIVERYTNSPYV 175 R + +Y NS Y Sbjct: 378 RFLAQYPNSKYT 389 >gi|283779529|ref|YP_003370284.1| hypothetical protein Psta_1749 [Pirellula staleyi DSM 6068] gi|283437982|gb|ADB16424.1| hypothetical protein Psta_1749 [Pirellula staleyi DSM 6068] Length = 443 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 10/167 (5%) Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 +A ++ D P +A + L +A +++GK+ +A + YP S++ + Sbjct: 225 QALRVLDKIRIDDPTGRLADDATLAAANEHFASGKWTKADDWYTDLRQAYPTSEHQFLAH 284 Query: 135 YLVGM-SYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-----SPYVKGARFYVTVGRNQ 188 YL G+ + Y + + + +I ++ N S ++ A + + Sbjct: 285 YL-GLKAKLNSYMGPDYSANSLDEAEKLIKQIRRQFPNEAAKESDFLDRAAAEIRYKK-- 341 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 A K + YY KRGEY AA ++ + A++SD + + RL E Sbjct: 342 -AEKVWNVASYYDKRGEYRAAAHHYRRIAADFSDTPFSSRSDQRLAE 387 Score = 43.2 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 41/112 (36%), Gaps = 20/112 (17%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY---------------EY 79 L + D + +++Y +A + +A Sbjct: 77 LSLKNLGKTTKRLAGQGPDRKLAQQLYREAEEL-----YKEAAAAEGSRRKEMFFAAAAK 131 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 F + + +P + + + +L M+ + +Y +A + E I QYP ++++D Sbjct: 132 FEEAADRWPSSALEQDALFMTGESYFFCDEYPEANTFYERLIKQYPNNRHLD 183 >gi|189218837|ref|YP_001939478.1| TPR repeats containing protein [Methylacidiphilum infernorum V4] gi|189185695|gb|ACD82880.1| TPR repeats containing protein [Methylacidiphilum infernorum V4] Length = 771 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 57/164 (34%), Gaps = 21/164 (12%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA---------VLFLKE 70 K L ++A C W+ ++ Y + +L + Sbjct: 208 TKDPLAKSKALARCGWAAWKSGQPKEAERFFTQASGGPP--YTEGNRLANSGLFQFYLSQ 265 Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + + +A +++ + S F K LL Y +A +L + +I +YP S V Sbjct: 266 KRYKEAIQFYEKHSNGFIETE-KEKLLLDLVNAYLEIKDYAKALTLLDSFIAEYPRSALV 324 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 D Y +++ + R + + + +Y +SPY Sbjct: 325 DLAAYERVLAHYYLDRSS---------LETNIEQFSLQYPSSPY 359 Score = 42.4 bits (99), Expect = 0.068, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-SAFVQYSAGKYQQAASLGE 118 +Y KA + + FS A + + + V+ +++LM A Y K+ +AASL + Sbjct: 364 LYLKAEDYNRTGRFSLALPLWEKLDSVHS-SFVSPEAILMGKANSNYGLEKWAEAASLYK 422 Query: 119 EYITQYPESKNV 130 ++T YP SK V Sbjct: 423 SFLTGYPHSKEV 434 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 72/222 (32%), Gaps = 23/222 (10%) Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC-SRDFPFAGVARKS 96 S + S + Y A LK++ +A YF + P S Sbjct: 566 CSYVQSYEDNYKSGAETIPTELYYWIASQLLKKEKREQAALYFKKVVQSANPKDKYYSSS 625 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L + A + +++A + E+ P S + V L+G++ Q+ Sbjct: 626 LWLLAETERKLMNWKEANTYYLEFQKSDPNSASNSPV--LLGLAETQIALG------QFA 677 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + ++ + AR + IG YL + Y A + + Sbjct: 678 EAQKNLEEVMLKEPEGENNAKAR--------------MLIGDSYLAQKNYREAAKAYTTL 723 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 Y D AM + ++ D+A ++E+YP Sbjct: 724 SLIYQDDHITPRAMQKAALSFSKAGDNDQAAFWEKKLKEKYP 765 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 65/219 (29%), Gaps = 17/219 (7%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + S+ V ++A+ ++ + +A F + +L A Sbjct: 21 SEKVNPSIEIVPTADLELDRAIALYRQGRYEEAIRVFYRILPQLSPGKKTE-ALFSMADC 79 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD----------VPYDQR 153 GK +A + + I P S V Y+ G ++ V Sbjct: 80 YRLIGKKAEAIRIYQLLIQNDPSSAFVPTAYFWEGKLLSEQGDFAKAAPALKIAVEKGDP 139 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR----YYLKRGEYVAA 209 T + + + + + + + ++ VE YY ++ A Sbjct: 140 QTSQAASFFLALCQL--QTKEEEKGVYRLRELVDKAPDLRVEAAGVLATYYESILDWAHA 197 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 + + +V+ D +A+AR A EA Sbjct: 198 LEYWSVVVRETKDPLAKSKALARCGWAAWKSGQPKEAER 236 >gi|66044665|ref|YP_234506.1| TPR repeat-containing protein [Pseudomonas syringae pv. syringae B728a] gi|63255372|gb|AAY36468.1| TPR repeat [Pseudomonas syringae pv. syringae B728a] Length = 248 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 121 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 180 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 181 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 232 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 233 PGTSAAQLAQRDLQRL 248 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 136 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 182 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 183 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 236 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 237 AAQLAQRDLQ 246 >gi|187251318|ref|YP_001875800.1| hypothetical protein Emin_0908 [Elusimicrobium minutum Pei191] gi|186971478|gb|ACC98463.1| hypothetical protein Emin_0908 [Elusimicrobium minutum Pei191] Length = 209 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 19/158 (12%), Positives = 49/158 (31%), Gaps = 10/158 (6%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 + + L G + T+ Y ++ N+ +A + + + Sbjct: 62 LTMAILFGEPENLTAVTEKYPKTNAALYAAYY-MGDYNYEQGNYPEAVSLYKKV-AEGKN 119 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 +A + + A + Y+ + E++I + P+ + VY +S + Sbjct: 120 KELAHVAQISLAAAYQANKDYEASILTAEDFINKNPQHYAIAQVYLTKALSQELAGKK-- 177 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 + I R+ N+ + A+ + Sbjct: 178 ------EAAAADYKIIESRFPNTYFAAFAKNKLKELNK 209 >gi|241760457|ref|ZP_04758550.1| periplasmic protein [Neisseria flavescens SK114] gi|241318961|gb|EER55463.1| periplasmic protein [Neisseria flavescens SK114] Length = 251 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 50/134 (37%), Gaps = 13/134 (9%) Query: 48 LDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 + S TD Q E+ Y +A + + NFS A + + +AR+++ + Q Sbjct: 121 VPSETDSAAQNELRLYNQAQKYYQRNNFSAAVAILKEADGGN-GSEIARRNMYLLLQSQQ 179 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSR 164 G + +G Y ++ S Y +G + +D+ + Sbjct: 180 RLGNCESVIEIGNRYANRFRNSPQAPDAMYSIGQCQYKLQQKDIAR---------STWRK 230 Query: 165 IVERYTNSPYVKGA 178 +++ + NS K A Sbjct: 231 LIQSFPNSEAAKRA 244 Score = 42.0 bits (98), Expect = 0.088, Method: Composition-based stats. Identities = 19/150 (12%), Positives = 42/150 (28%), Gaps = 48/150 (32%) Query: 170 TNSPYVKGARFYVTVG---------RNQLAAKEVEI---GRYYLKRGEYVAA-------- 209 + + + + + A E+ + + Y +R + AA Sbjct: 100 PKAQRLDDRKLKMNYLANGGGVPSETDSAAQNELRLYNQAQKYYQRNNFSAAVAILKEAD 159 Query: 210 ------IPR---------------FQLVLA-------NYSDAEHAEEAMARLVEAYVALA 241 I R + V+ + ++ A +AM + + L Sbjct: 160 GGNGSEIARRNMYLLLQSQQRLGNCESVIEIGNRYANRFRNSPQAPDAMYSIGQCQYKLQ 219 Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271 D AR + + +P A+ +K Sbjct: 220 QKDIARSTWRKLIQSFPNSEAAKRASISLK 249 >gi|120612057|ref|YP_971735.1| hypothetical protein Aave_3404 [Acidovorax citrulli AAC00-1] gi|120590521|gb|ABM33961.1| Tetratricopeptide TPR_2 repeat protein [Acidovorax citrulli AAC00-1] Length = 268 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 46/132 (34%), Gaps = 8/132 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 ++ +E A+ + F A F R +P +G + QY+ Y++A Sbjct: 145 PAEKRDFEAALAVFRSGKFPDAVSAFGNFLRQYPRSGYVPSARFWLGNAQYATRDYKEAI 204 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + + + P+ +S I + + + T+ + + ++ Y S Sbjct: 205 NNFKALLAASPDHARAPEA----ALS----IANCQIELKDTRAARKTLEDLLRAYPQSEA 256 Query: 175 VKGARFYVTVGR 186 A+ + + Sbjct: 257 AAAAKERLARLK 268 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 46/143 (32%), Gaps = 22/143 (15%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A K +A + +GK+ A S ++ QYP S V + +G + Sbjct: 146 AEKRDFEAALAVFRSGKFPDAVSAFGNFLRQYPRSGYVPSARFWLGNAQYAT-------- 197 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R K + ++ + A + + +L + AA Sbjct: 198 RDYKEAINNFKALLAASPDHARAPEAALSIANCQIEL--------------KDTRAARKT 243 Query: 213 FQLVLANYSDAEHAEEAMARLVE 235 + +L Y +E A A RL Sbjct: 244 LEDLLRAYPQSEAAAAAKERLAR 266 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 37/105 (35%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + +Y S YV ARF++ + +Y AI F+ + Sbjct: 165 DAVSAFGNFLRQYPRSGYVPSARFWLGNAQ--------------YATRDYKEAINNFKAL 210 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 LA D A EA + + L AR+ + + YPQ Sbjct: 211 LAASPDHARAPEAALSIANCQIELKDTRAARKTLEDLLRAYPQSE 255 >gi|253997442|ref|YP_003049506.1| tol-pal system protein YbgF [Methylotenera mobilis JLW8] gi|253984121|gb|ACT48979.1| tol-pal system protein YbgF [Methylotenera mobilis JLW8] Length = 269 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 43/116 (37%), Gaps = 14/116 (12%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 K + ++ Y NS A + + + L Y ++I Q Sbjct: 162 KDAFNTYDKFLKDYPNSSSASEAMYGLGYSQFAL--------------KNYKSSIATQQK 207 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++ Y+D+ +AM + + + L L+ A++ + + ++P + +K Sbjct: 208 LIDTYADSPKVPDAMFNMANSQIQLGLVPGAKKTLRDLIAKFPNSELTPAAQKRLK 263 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 52/134 (38%), Gaps = 8/134 (5%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + ++ E A KE A+ +++ +D+P + A +++ + Q++ Y+ Sbjct: 140 EKNTQEYQLLELANGLSKESKHKDAFNTYDKFLKDYPNSSSASEAMYGLGYSQFALKNYK 199 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + + ++ I Y +S V + + S Q+ + + ++ ++ N Sbjct: 200 SSIATQQKLIDTYADSPKVPDAMFNMANSQIQL--------GLVPGAKKTLRDLIAKFPN 251 Query: 172 SPYVKGARFYVTVG 185 S A+ + Sbjct: 252 SELTPAAQKRLKAL 265 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 52/137 (37%), Gaps = 22/137 (16%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 LL A K++ A + ++++ YP S + Y +G S + + K Sbjct: 148 LLELANGLSKESKHKDAFNTYDKFLKDYPNSSSASEAMYGLGYSQFAL--------KNYK 199 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + ++++ Y +SP V A F + + QL G A + + Sbjct: 200 SSIATQQKLIDTYADSPKVPDAMFNMANSQIQL--------------GLVPGAKKTLRDL 245 Query: 217 LANYSDAEHAEEAMARL 233 +A + ++E A RL Sbjct: 246 IAKFPNSELTPAAQKRL 262 >gi|330896137|gb|EGH28358.1| tol-pal system protein YbgF [Pseudomonas syringae pv. japonica str. M301072PT] Length = 253 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 126 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 185 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 186 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 237 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 238 PGTSAAQLAQRDLQRL 253 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 141 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 187 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 188 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 241 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 242 AAQLAQRDLQ 251 >gi|330892248|gb|EGH24909.1| tol-pal system protein YbgF [Pseudomonas syringae pv. mori str. 301020] Length = 248 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 121 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 180 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 181 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 232 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 233 PGTSAAQLAQRDLQRL 248 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 136 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 182 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 183 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 236 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 237 AAQLAQRDLQ 246 >gi|270295358|ref|ZP_06201559.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274605|gb|EFA20466.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 1014 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 33/73 (45%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +YEK +++ N +A F + +P + V+RK+ + Y Y +A Sbjct: 633 NALYEKGRSYVQSNNSRQAIATFRELLAKYPESPVSRKAAAEIGLLYYQNDDYDRAIEAY 692 Query: 118 EEYITQYPESKNV 130 + +TQYP S+ Sbjct: 693 KHVVTQYPGSEEA 705 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 71/226 (31%), Gaps = 50/226 (22%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-------SAFVQYSAGK--- 109 Y + ++++S A F L A G Sbjct: 524 YYNLGYIAFHQKDYSTAENRFRNF------------VQLEKGENPTALADAYNRIGDCNL 571 Query: 110 ----YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +++A + + DY Y + + Y Q+ + + R+ Sbjct: 572 HVRRFEEAKQYYAKAENLN--TPAGDYAVYQLALVYGM--------QKNYTEKVSMLDRL 621 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 +Y NSPY N L K GR Y++ AI F+ +LA Y ++ Sbjct: 622 AAKYPNSPYA----------INALYEK----GRSYVQSNNSRQAIATFRELLAKYPESPV 667 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + +A A + Y D A E + +YP AR +K Sbjct: 668 SRKAAAEIGLLYYQNDDYDRAIEAYKHVVTQYPGSEEARLAMRDLK 713 Score = 52.8 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 49/126 (38%), Gaps = 8/126 (6%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 VY+ A+++ ++N+++ ++ + +P + A +L + +QA + E Sbjct: 598 VYQLALVYGMQKNYTEKVSMLDRLAAKYPNSPYAINALYEKGRSYVQSNNSRQAIATFRE 657 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + +YPES +G+ Y D ++ +V +Y S + A Sbjct: 658 LLAKYPESPVSRKAAAEIGLLYY-QNDDYDR-------AIEAYKHVVTQYPGSEEARLAM 709 Query: 180 FYVTVG 185 + Sbjct: 710 RDLKSI 715 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 29/235 (12%), Positives = 72/235 (30%), Gaps = 38/235 (16%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115 +++ F +A YFNQ ++ + + Y + ++AA Sbjct: 447 LFQLGTQSFANTQFEQAIGYFNQSVTL---GQYNLQTKADALYWLGESYYRLNRMREAAR 503 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQM--IRDVPYDQRATKLMLQYMSRIVERYTNSP 173 EY++ ++ + + ++Y + I D + + ++ + +P Sbjct: 504 NFNEYLSL-TRQRDTE----MFALAYYNLGYIAFHQKDYSTAENRFRNFVQLEKG--ENP 556 Query: 174 YV-KGARFYVTVGRNQLAAKE---------------------VEIGRYYLKRGEYVAAIP 211 A + + E ++ Y + Y + Sbjct: 557 TALADAYNRIGDCNLHVRRFEEAKQYYAKAENLNTPAGDYAVYQLALVYGMQKNYTEKVS 616 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 + A Y ++ +A A+ +YV +A + +YP+ +R Sbjct: 617 MLDRLAAKYPNSPYAINALYEKGRSYVQSNNSRQAIATFRELLAKYPESPVSRKA 671 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 38/271 (14%), Positives = 85/271 (31%), Gaps = 74/271 (27%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--LMSAFVQ 104 Y +S + E+ +L+ + ++ +A E + +P + AR ++ L S +V Sbjct: 662 YPESPVSRKAAAEI---GLLYYQNDDYDRAIEAYKHVVTQYPGSEEARLAMRDLKSIYVD 718 Query: 105 ------------------------------------YSAGKYQQAASLGEEYITQYPESK 128 Y G+ A Y+ YP Sbjct: 719 ANRVDEFAALAAQMPGEIRFEPSEQDSLTYIAAEKVYMKGEATPAKESFTRYLQSYPGGA 778 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 +Y + + + +Q+ + +L++ +++E Y ++PY + A Sbjct: 779 FSLNAHYYLCV--------IGKEQKDEEAVLEHAGKLLE-YPDNPYSEEALLMHGEILFN 829 Query: 189 LAAKEVEIGRY-YLKRGEYVA----------------------AIPRFQLVLANYSDAEH 225 ++ + Y L+ A I +LA + Sbjct: 830 RQQYDLALADYKKLQAKATTAERRQLGAIGVLRCGALMHDDAEVINAATALLAEAKLSPE 889 Query: 226 AE-EAMARLVEAYVALALMDEAREVVSLIQE 255 EA+ +AY+ +A + + L+ + Sbjct: 890 LRNEALYYRAKAYLNQKADKKAMDDLQLLAK 920 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 72/214 (33%), Gaps = 19/214 (8%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLM--SAFVQYSAGKYQQAASLG 117 Y A ++L ++ + KA P + L +Y GKY +A Sbjct: 221 YYIAEIYLLKKQYDKAEIVAQNALSAHPDGLSYTHTAELNRILGTAEYHFGKYHEAVKSF 280 Query: 118 EEYITQYPESK-NVDYVYYLVGMSYAQ-----MIRDVPYDQRATKLMLQYMSRIVERYTN 171 +YI ES + Y++GMSY Q + V A L + + Sbjct: 281 GQYIEHNAESAAHRRDALYMLGMSYYQCGVYSQVPSVLGRVTAENDALSQNAYLHMGLAY 340 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEI---GRYYLKR-------GEYVAAIPRFQLVLANYS 221 + + + + ++++ Y + ++ F+ L + Sbjct: 341 LQLADKTKARMAFEQAAASNADMKVKEQAAYNYALCIHETSYSAFGESVTVFEKFLNEFP 400 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 ++ +AE+ LVE Y+ D A + + I Sbjct: 401 NSPYAEKVSNYLVEVYMNTRSYDAALKSIDRISH 434 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 61/220 (27%), Gaps = 34/220 (15%) Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 K+ + ++P A + + A + G Y A ++ S+ D + Sbjct: 92 KSIDLLRAFLDEYPDTPHANRIYALIASAYFFEGNYDDALAMFNSVRLDLLGSEERDDMT 151 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE- 193 Y + Y + K + + R T+ Y +Y++ R + Sbjct: 152 YRLATCYLKT--------GNVKEAAIWFETL--RSTSRKYTADCAYYISYIRYTQGRYDE 201 Query: 194 -------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD---AEHAEEAMA 231 I YL + +Y A Q L+ + D H E Sbjct: 202 ALSGFLPLQDNAKYKDLVPYYIAEIYLLKKQYDKAEIVAQNALSAHPDGLSYTHTAELNR 261 Query: 232 RLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270 L A EA + I+ R ++ Sbjct: 262 ILGTAEYHFGKYHEAVKSFGQYIEHNAESAAHRRDALYML 301 >gi|153008552|ref|YP_001369767.1| Tol-Pal system YbgF [Ochrobactrum anthropi ATCC 49188] gi|151560440|gb|ABS13938.1| Tol-Pal system YbgF [Ochrobactrum anthropi ATCC 49188] Length = 505 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 51/140 (36%), Gaps = 8/140 (5%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 ++ + S+ +Y+ + +L ++ A F + + +P Sbjct: 356 GAAPGATSGGNAAGDTVASLPTDDNPSSLYQASYQYLMSGDYKAAETGFREHVKRYPADP 415 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 ++ Y G+Y +AA++ + YP+SK + +GM+ +M D Sbjct: 416 NTAEARFWLGESLYGQGRYPEAATVFIDTQRDYPDSKRAPENMFKLGMTLEKMDN---RD 472 Query: 152 QRATKLMLQYMSRIVERYTN 171 + ++I ERY Sbjct: 473 -----VACATFAQIPERYPK 487 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 3/79 (3%) Query: 194 VEIGRY-YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 + Y YL G+Y AA F+ + Y + EA L E+ EA V Sbjct: 384 LYQASYQYLMSGDYKAAETGFREHVKRYPADPNTAEARFWLGESLYGQGRYPEAATVFID 443 Query: 253 IQERYPQGYWARYVETLVK 271 Q YP R E + K Sbjct: 444 TQRDYPDSK--RAPENMFK 460 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 31/98 (31%), Gaps = 8/98 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + +G Y+ A + E++ +YP N + +G S R Sbjct: 389 YQYLMSGDYKAAETGFREHVKRYPADPNTAEARFWLGESLYGQGRYP--------EAATV 440 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y +S F + + ++ ++V + Sbjct: 441 FIDTQRDYPDSKRAPENMFKLGMTLEKMDNRDVACATF 478 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 36/107 (33%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY P ARF++ +G Y A Sbjct: 395 GDYKAAETGFREHVKRYPADPNTAEARFWLGESL--------------YGQGRYPEAATV 440 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F +Y D++ A E M +L + D A + I ERYP+ Sbjct: 441 FIDTQRDYPDSKRAPENMFKLGMTLEKMDNRDVACATFAQIPERYPK 487 >gi|189423894|ref|YP_001951071.1| tol-pal system protein YbgF [Geobacter lovleyi SZ] gi|189420153|gb|ACD94551.1| tol-pal system protein YbgF [Geobacter lovleyi SZ] Length = 271 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 22/147 (14%) Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 P + YL G+ + D + + L +E+ V AR++ Sbjct: 144 PGKEATADALYLKGLESFK-----GGDMPSARTQLTSF---IEKNPGHDLVPNARYW--- 192 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 IG Y Y AI FQ V+ Y E A AM + ++ AL + Sbjct: 193 -----------IGETYYGEKNYEQAILEFQEVVKQYPKKEKAPAAMLKQALSFKALKDLK 241 Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271 + ++ + YP+ A+ ++K Sbjct: 242 STQYLLKRLIGDYPKSDEAKKARVILK 268 Score = 52.8 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 44/137 (32%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + +Y K + K + A P + + Y Sbjct: 143 APGKEATADALYLKGLESFKGGDMPSARTQLTSFIEKNPGHDLVPNARYWIGETYYGEKN 202 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+QA +E + QYP+ + +S+ + D ++T+ + R++ Y Sbjct: 203 YEQAILEFQEVVKQYPKKEKAPAAMLKQALSFKAL-----KDLKSTQY---LLKRLIGDY 254 Query: 170 TNSPYVKGARFYVTVGR 186 S K AR + + Sbjct: 255 PKSDEAKKARVILKEVK 271 >gi|306844685|ref|ZP_07477270.1| tol-pal system protein YbgF [Brucella sp. BO1] gi|306274857|gb|EFM56627.1| tol-pal system protein YbgF [Brucella sp. BO1] Length = 484 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 51/130 (39%), Gaps = 8/130 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 S+ + S+ +Y+ A +L ++ A F + + +P + ++ Sbjct: 345 SAASDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLG 404 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 Y G+Y +AA+L + YP+SK + +GM+ +M + Sbjct: 405 ESLYGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACAT 456 Query: 162 MSRIVERYTN 171 ++I +RY Sbjct: 457 FAQIPQRYPK 466 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SL +A+ +G Y+ A + E++ +YP + +G S R Sbjct: 362 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 414 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y +S F + + ++ +V + Sbjct: 415 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 457 Score = 39.3 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY P ARF++ +G Y A Sbjct: 374 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 419 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F +Y D++ A E M +L A + D A + I +RYP+ Sbjct: 420 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 466 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 23/68 (33%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + YL G+Y AA F+ + Y EA L E+ EA + Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423 Query: 254 QERYPQGY 261 Q YP Sbjct: 424 QRDYPDSK 431 >gi|302130602|ref|ZP_07256592.1| tol-pal system protein YbgF [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 248 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 121 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 180 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 181 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 232 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 233 PGTSAAQLAQRDLQRL 248 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 136 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 182 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 183 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 236 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 237 AAQLAQRDLQ 246 >gi|325107898|ref|YP_004268966.1| hypothetical protein Plabr_1332 [Planctomyces brasiliensis DSM 5305] gi|324968166|gb|ADY58944.1| hypothetical protein Plabr_1332 [Planctomyces brasiliensis DSM 5305] Length = 532 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 81/239 (33%), Gaps = 43/239 (17%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPF---------------------------AGVA 93 YEKA ++ +F A F ++D+ + Sbjct: 83 YEKAQAMYEQGDFKGAETAFEDITQDYATDESGFFRRRRLGNILKPKSALQASYYDNPLV 142 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD---YVYYLVGMSYAQMIRDVPY 150 SL M A +Y K A S+ + + QYP ++++D + + M++ Sbjct: 143 EDSLFMLAESRYKQEKLPGAESVYIQLLQQYPNTRHLDKSTERLFDIAMTWMDFKTTTSD 202 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 + + + E +NS Y + + F + G+ E GR A+ Sbjct: 203 EVKVASHSDTGRASKPEVVSNSDYERPSFFNMFDGKRPWTDTE---GR----------AL 249 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 + + N A++A+ Y+ + EA E +++E +P + L Sbjct: 250 EALKAIWMNDPTGPLADDALMLTASHYLRVGRHAEASETFRMLREEFPDSPHLKDAYVL 308 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 70/165 (42%), Gaps = 6/165 (3%) Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 +A E + P +A +L+++A G++ +A+ ++P+S ++ Sbjct: 247 RALEALKAIWMNDPTGPLADDALMLTASHYLRVGRHAEASETFRMLREEFPDSPHLKDA- 305 Query: 135 YLVGMSYAQMI--RDVPYDQRATKLMLQYMSRIVERYTN-SPYVKGARFYVTVGRNQLA- 190 Y++G SY + Y+ R+ + +R + + + SP + + A Sbjct: 306 YVLG-SYVTQASYQGAAYEDRSLIESRELKTRALTMFRDLSPEERKRLEEEVYRVDDAAV 364 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 A+E E YYL +G + A ++ Y +++A +A L + Sbjct: 365 AREFERSLYYLNKGNFDAVEMYCNYIVNKYPQSKYAGKARGLLAQ 409 >gi|149927734|ref|ZP_01915986.1| hypothetical protein LMED105_16053 [Limnobacter sp. MED105] gi|149823560|gb|EDM82790.1| hypothetical protein LMED105_16053 [Limnobacter sp. MED105] Length = 248 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 48/145 (33%), Gaps = 10/145 (6%) Query: 44 RDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 + V LD + Y+ + K N+ A F + + + + Sbjct: 112 KAVQLDGEELTVPPEQFNDYQAGLDHFKAGNYKDAALQFQDFLNKYKQSKLEPQVRYFLG 171 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 Q++ G+Y+ A + +P+S +S A ++ + Sbjct: 172 STQFAQGEYKTALVTQRDLAKDFPDSPRAPDAL----LSMASSQLELKSIPG----AKKT 223 Query: 162 MSRIVERYTNSPYVKGARFYVTVGR 186 + ++ +Y NSP A+ + + Sbjct: 224 LGELIAKYPNSPAAASAKARLEALK 248 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 42/127 (33%), Gaps = 22/127 (17%) Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 Y G+ + + K + +Y S R Sbjct: 131 YQAGLDHFKA--------GNYKDAALQFQDFLNKYKQSKLEPQVR--------------Y 168 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +G +GEY A+ + + ++ D+ A +A+ + + + L + A++ + + Sbjct: 169 FLGSTQFAQGEYKTALVTQRDLAKDFPDSPRAPDALLSMASSQLELKSIPGAKKTLGELI 228 Query: 255 ERYPQGY 261 +YP Sbjct: 229 AKYPNSP 235 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 28/146 (19%) Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 F ++ L + AG Y+ AA ++++ +Y +SK V Y +G + Sbjct: 128 FNDY--QAGLD----HFKAGNYKDAALQFQDFLNKYKQSKLEPQVRYFLGSTQFA----- 176 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 Q K L + + + +SP A + + L+ Sbjct: 177 ---QGEYKTALVTQRDLAKDFPDSPRAPDALLSMASSQ--------------LELKSIPG 219 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLV 234 A ++A Y ++ A A ARL Sbjct: 220 AKKTLGELIAKYPNSPAAASAKARLE 245 >gi|320323044|gb|EFW79133.1| tol-pal system protein YbgF [Pseudomonas syringae pv. glycinea str. B076] gi|320329684|gb|EFW85673.1| tol-pal system protein YbgF [Pseudomonas syringae pv. glycinea str. race 4] Length = 208 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 81 EPPDPTKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 193 PGTSAAQLAQRDLQRL 208 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 96 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 197 AAQLAQRDLQ 206 >gi|152987540|ref|YP_001349883.1| TPR repeat-containing protein [Pseudomonas aeruginosa PA7] gi|150962698|gb|ABR84723.1| TPR repeat [Pseudomonas aeruginosa PA7] Length = 274 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 22/147 (14%) Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 P + +YY +I+ +D Q + + +Y NS Y A++++ Sbjct: 147 PGDPAKEKLYYDAA---FDLIKSKDFD-----KASQAFTAFLRKYPNSQYSGNAQYWLGE 198 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 LA +++ A F V +Y ++ +++ +L + L D Sbjct: 199 VN--LAKGDLQ------------GAGQAFARVSQSYPSSQKVPDSLYKLADVERRLGNND 244 Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271 +A+ ++ + +YP A+ + +K Sbjct: 245 KAKGILQQVISQYPGTSAAQLSQRDLK 271 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 47/137 (34%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ Y+ A +K ++F KA + F R +P + + + V + G Sbjct: 146 EPGDPAKEKLYYDAAFDLIKSKDFDKASQAFTAFLRKYPNSQYSGNAQYWLGEVNLAKGD 205 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A YP S+ V Y + DV + +++ +Y Sbjct: 206 LQGAGQAFARVSQSYPSSQKVPDSLYKLA--------DVERRLGNNDKAKGILQQVISQY 257 Query: 170 TNSPYVKGARFYVTVGR 186 + + ++ + R Sbjct: 258 PGTSAAQLSQRDLKNLR 274 >gi|312796782|ref|YP_004029704.1| Tol system periplasmic component YbgF [Burkholderia rhizoxinica HKI 454] gi|312168557|emb|CBW75560.1| Tol system periplasmic component YbgF [Burkholderia rhizoxinica HKI 454] Length = 249 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 46/132 (34%), Gaps = 8/132 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + + A+ K +F A F +P + + Y+ Y+ + Sbjct: 126 PGETDAFNAALQLFKNGDFKGATSGFKAFVSKYPNSPYQPTAQYWLGNALYAQRDYKAST 185 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 ++ + +T+YP + + + + V + + +++ +Y+ S Sbjct: 186 TVWQGVVTKYPTHPRAPEALLAIANNQLEQGQKVS--------AKRTLGQVLAQYSGSNA 237 Query: 175 VKGARFYVTVGR 186 A+ ++ R Sbjct: 238 AHAAQSRLSQIR 249 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 49/131 (37%), Gaps = 22/131 (16%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + G ++ A S + ++++YP S Y +G + QR K Sbjct: 139 FKNGDFKGATSGFKAFVSKYPNSPYQPTAQYWLGNALYA--------QRDYKASTTVWQG 190 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V +Y P A + I L++G+ V+A VLA YS + Sbjct: 191 VVTKYPTHPRAPEAL--------------LAIANNQLEQGQKVSAKRTLGQVLAQYSGSN 236 Query: 225 HAEEAMARLVE 235 A A +RL + Sbjct: 237 AAHAAQSRLSQ 247 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V +Y NSPY A++++ N L Y +R Y A+ Sbjct: 142 GDFKGATSGFKAFVSKYPNSPYQPTAQYWLG---NAL----------YAQRD-YKASTTV 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Q V+ Y A EA+ + + A+ + + +Y Sbjct: 188 WQGVVTKYPTHPRAPEALLAIANNQLEQGQKVSAKRTLGQVLAQYSGSN 236 >gi|302038647|ref|YP_003798969.1| putative tol-Pal system protein YbgF [Candidatus Nitrospira defluvii] gi|300606711|emb|CBK43044.1| putative Tol-Pal system protein YbgF [Candidatus Nitrospira defluvii] Length = 259 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 46/131 (35%), Gaps = 8/131 (6%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + A F A F + +DFP + + Y Y +A Sbjct: 137 TPTSAFNLAYNDYLNGKFDLAVGGFQRFIKDFPSTSLTPNAHYWLGESYYGQKDYIRAMQ 196 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 E + +Y ++ V + +G+S A+ T +Y+ R++E Y+ S Sbjct: 197 SFEHVVNEYAGNEKVPAALFKLGLSAAET--------GDTAKSRKYLKRVIEEYSTSDEA 248 Query: 176 KGARFYVTVGR 186 K A+ + R Sbjct: 249 KLAKAKMAEIR 259 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 48/137 (35%), Gaps = 22/137 (16%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A+ Y GK+ A + +I +P + +Y +G SY + Sbjct: 143 NLAYNDYLNGKFDLAVGGFQRFIKDFPSTSLTPNAHYWLGESYYGQKDYI--------RA 194 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 +Q +V Y + V A F + + G+ + + V+ Sbjct: 195 MQSFEHVVNEYAGNEKVPAALFKLG----------LSAAE----TGDTAKSRKYLKRVIE 240 Query: 219 NYSDAEHAEEAMARLVE 235 YS ++ A+ A A++ E Sbjct: 241 EYSTSDEAKLAKAKMAE 257 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 43/112 (38%), Gaps = 14/112 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L + R ++ + ++ A +++ G Y + +Y+ A+ F+ V Sbjct: 156 LAVGGFQRFIKDFPSTSLTPNAHYWL--------------GESYYGQKDYIRAMQSFEHV 201 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + Y+ E A+ +L + ++R+ + + E Y A+ + Sbjct: 202 VNEYAGNEKVPAALFKLGLSAAETGDTAKSRKYLKRVIEEYSTSDEAKLAKA 253 >gi|254000098|ref|YP_003052161.1| tol-pal system protein YbgF [Methylovorus sp. SIP3-4] gi|253986777|gb|ACT51634.1| tol-pal system protein YbgF [Methylovorus sp. SIP3-4] Length = 270 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 55/138 (39%), Gaps = 8/138 (5%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 + + + + A L+ F ++++ + + + +P + A ++ F Q+S Sbjct: 136 VTEAPASSSEAKDLDAANALLQASKFKESFDAYQKFLQAYPASTHAADAMYGLGFSQFSL 195 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 Y+ A + ++ + QYP+S + + S I+ D + + ++ Sbjct: 196 KNYKAAIATQQKLLKQYPDSAKAPEASFNIANS---QIQLADID-----GAKKTLRDLIS 247 Query: 168 RYTNSPYVKGARFYVTVG 185 +Y S + A+ + V Sbjct: 248 QYPKSDVIPRAQSRLKVL 265 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 14/116 (12%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 K + ++ Y S + A + + + L Y AAI Q Sbjct: 162 KESFDAYQKFLQAYPASTHAADAMYGLGFSQFSL--------------KNYKAAIATQQK 207 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 +L Y D+ A EA + + + LA +D A++ + + +YP+ ++ +K Sbjct: 208 LLKQYPDSAKAPEASFNIANSQIQLADIDGAKKTLRDLISQYPKSDVIPRAQSRLK 263 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 53/136 (38%), Gaps = 22/136 (16%) Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 L +A A K++++ ++++ YP S + Y +G S + + K Sbjct: 149 LDAANALLQASKFKESFDAYQKFLQAYPASTHAADAMYGLGFSQFSL--------KNYKA 200 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + +++++Y +S A F + + QLA + A + ++ Sbjct: 201 AIATQQKLLKQYPDSAKAPEASFNIANSQIQLADID--------------GAKKTLRDLI 246 Query: 218 ANYSDAEHAEEAMARL 233 + Y ++ A +RL Sbjct: 247 SQYPKSDVIPRAQSRL 262 >gi|330815666|ref|YP_004359371.1| hypothetical protein bgla_1g07230 [Burkholderia gladioli BSR3] gi|327368059|gb|AEA59415.1| hypothetical protein bgla_1g07230 [Burkholderia gladioli BSR3] Length = 249 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 14/120 (11%), Positives = 38/120 (31%), Gaps = 8/120 (6%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T + + + A + +F A F +P + + QY+ Sbjct: 121 EGTVQPGETDAFNAASQQFRAGDFKGAAASFRAFIAKYPQSPYQPVAQYWLGNAQYALRD 180 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ + + + + +P+ +G + Q+A + ++V ++ Sbjct: 181 YKGSTATWQALVKAFPQHPRAGDALVAIG------TNQLEQGQKAA--AKRTFEQVVSQF 232 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 22/119 (18%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Q+ AG ++ AA+ +I +YP+S Y +G + + D + + Q Sbjct: 138 QFRAGDFKGAAASFRAFIAKYPQSPYQPVAQYWLGNAQYAL-----RDYKGSTATWQA-- 190 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 +V+ + P A V IG L++G+ AA F+ V++ + Sbjct: 191 -LVKAFPQHPRAGDAL--------------VAIGTNQLEQGQKAAAKRTFEQVVSQFQG 234 Score = 35.9 bits (82), Expect = 6.2, Method: Composition-based stats. Identities = 12/107 (11%), Positives = 33/107 (30%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + +Y SPY A++++ A + +Y + Sbjct: 142 GDFKGAAASFRAFIAKYPQSPYQPVAQYWLGN-----AQYAL---------RDYKGSTAT 187 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +Q ++ + A +A+ + + A+ + ++ Sbjct: 188 WQALVKAFPQHPRAGDALVAIGTNQLEQGQKAAAKRTFEQVVSQFQG 234 >gi|256045304|ref|ZP_05448198.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. Rev.1] Length = 484 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + S+ +Y+ A +L ++ A F + + +P + ++ Sbjct: 348 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 407 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G+Y +AA+L + YP+SK + +GM+ +M + ++ Sbjct: 408 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 459 Query: 165 IVERYTN 171 I +RY Sbjct: 460 IPQRYPK 466 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SL +A+ +G Y+ A + E++ +YP + +G S R Sbjct: 362 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 414 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y +S F + + ++ +V + Sbjct: 415 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 457 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY P ARF++ +G Y A Sbjct: 374 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 419 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F +Y D++ A E M +L A + D A + I +RYP+ Sbjct: 420 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 466 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 23/68 (33%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + YL G+Y AA F+ + Y EA L E+ EA + Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423 Query: 254 QERYPQGY 261 Q YP Sbjct: 424 QRDYPDSK 431 >gi|313497576|gb|ADR58942.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 266 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 52/136 (38%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ Y+ A +K+++F KA + FN R +P + A + V + G Sbjct: 139 QPGDPAKEKLYYDAAFDLIKQKDFDKASQAFNAFLRKYPNSQYAGNAQYWLGEVNLAKGD 198 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A+ + +YP+ V Y + DV T + + ++V +Y Sbjct: 199 LQGASQAFAQVSQKYPKHSKVPDSLYKLA--------DVERRMGHTDKVKGILQQVVTQY 250 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 251 PGTSAAQLAQRDLQKL 266 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 45/120 (37%), Gaps = 14/120 (11%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q+ Q + + +Y NS Y A++++ LA +++ A Sbjct: 159 QKDFDKASQAFNAFLRKYPNSQYAGNAQYWLGEVN--LAKGDLQ------------GASQ 204 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 F V Y +++ +L + + D+ + ++ + +YP A+ + ++ Sbjct: 205 AFAQVSQKYPKHSKVPDSLYKLADVERRMGHTDKVKGILQQVVTQYPGTSAAQLAQRDLQ 264 >gi|265991729|ref|ZP_06104286.1| tol-Pal system YbgF [Brucella melitensis bv. 1 str. Rev.1] gi|263002685|gb|EEZ15088.1| tol-Pal system YbgF [Brucella melitensis bv. 1 str. Rev.1] Length = 488 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + S+ +Y+ A +L ++ A F + + +P + ++ Sbjct: 352 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 411 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G+Y +AA+L + YP+SK + +GM+ +M + ++ Sbjct: 412 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 463 Query: 165 IVERYTN 171 I +RY Sbjct: 464 IPQRYPK 470 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SL +A+ +G Y+ A + E++ +YP + +G S R Sbjct: 366 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 418 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y +S F + + ++ +V + Sbjct: 419 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 461 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY P ARF++ +G Y A Sbjct: 378 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 423 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F +Y D++ A E M +L A + D A + I +RYP+ Sbjct: 424 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 470 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 23/68 (33%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + YL G+Y AA F+ + Y EA L E+ EA + Sbjct: 368 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 427 Query: 254 QERYPQGY 261 Q YP Sbjct: 428 QRDYPDSK 435 >gi|238920736|ref|YP_002934251.1| tol-pal system protein YbgF, [Edwardsiella ictaluri 93-146] gi|238870305|gb|ACR70016.1| tol-pal system protein YbgF, putative [Edwardsiella ictaluri 93-146] Length = 252 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 9/123 (7%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y +AV L ++ +A F + +P + + + YS GK AA Sbjct: 137 YNRAVDLVLVKKQNDQAISAFQTFIKQYPDSTYQPNANYWLGQLFYSKGKKDDAAYYYAV 196 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S Y VG+ + ++ +++++Y NS K A+ Sbjct: 197 VVKNYPKSPKAAESMYKVGV--------IMQEKGQADKANAVYQQVIKQYPNSDAAKLAQ 248 Query: 180 FYV 182 + Sbjct: 249 KRM 251 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 47/127 (37%), Gaps = 14/127 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 D+ ++ + +++Y +S Y A +++ +Y Sbjct: 137 YNRAVDLVLVKKQNDQAISAFQTFIKQYPDSTYQPNANYWLGQL-------------FYS 183 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 K + AA + +V+ NY + A E+M ++ D+A V + ++YP Sbjct: 184 KGKKDDAA-YYYAVVVKNYPKSPKAAESMYKVGVIMQEKGQADKANAVYQQVIKQYPNSD 242 Query: 262 WARYVET 268 A+ + Sbjct: 243 AAKLAQK 249 >gi|330968883|gb|EGH68949.1| tol-pal system protein YbgF [Pseudomonas syringae pv. aceris str. M302273PT] Length = 208 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 81 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 193 PGTSAAQLAQRDLQRL 208 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 96 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 197 AAQLAQRDLQ 206 >gi|325105317|ref|YP_004274971.1| tetratricopeptide TPR_3 [Pedobacter saltans DSM 12145] gi|324974165|gb|ADY53149.1| tetratricopeptide TPR_3 [Pedobacter saltans DSM 12145] Length = 604 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 7/126 (5%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y KA ++ +A + + +P +A LL A + + Y+QA S E+ Sbjct: 482 YAKAEFLREQHLHEQALSKLDSVLKAYPNTDLADDILLSKAKIYEAKRDYKQAISYYEKL 541 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + S +D Y +G+ Y I++ + Y ++++ + S Y AR Sbjct: 542 CNDFSNSIWIDDAIYNIGIIYQDKIQNN-------QSASLYYEKLIKDHPGSIYTIDARK 594 Query: 181 YVTVGR 186 + R Sbjct: 595 RFRLLR 600 >gi|26987959|ref|NP_743384.1| hypothetical protein PP_1224 [Pseudomonas putida KT2440] gi|60416287|sp|P0A130|Y1224_PSEPK RecName: Full=Uncharacterized protein PP_1224; Flags: Precursor gi|60416350|sp|P0A131|YOPRL_PSEPU RecName: Full=Uncharacterized protein in oprL 3'region; AltName: Full=ORF2; Flags: Precursor gi|24982672|gb|AAN66848.1|AE016313_7 conserved hypothetical protein [Pseudomonas putida KT2440] gi|861088|emb|CAA52295.1| hypothetical protein [Pseudomonas putida] Length = 268 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 52/136 (38%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ Y+ A +K+++F KA + FN R +P + A + V + G Sbjct: 141 QPGDPAKEKLYYDAAFDLIKQKDFDKASQAFNAFLRKYPNSQYAGNAQYWLGEVNLAKGD 200 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A+ + +YP+ V Y + DV T + + ++V +Y Sbjct: 201 LQGASQAFAQVSQKYPKHSKVPDSLYKLA--------DVERRMGHTDKVKGILQQVVTQY 252 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 253 PGTSAAQLAQRDLQKL 268 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 45/120 (37%), Gaps = 14/120 (11%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q+ Q + + +Y NS Y A++++ LA +++ A Sbjct: 161 QKDFDKASQAFNAFLRKYPNSQYAGNAQYWLGEVN--LAKGDLQ------------GASQ 206 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 F V Y +++ +L + + D+ + ++ + +YP A+ + ++ Sbjct: 207 AFAQVSQKYPKHSKVPDSLYKLADVERRMGHTDKVKGILQQVVTQYPGTSAAQLAQRDLQ 266 >gi|329956615|ref|ZP_08297188.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056] gi|328523987|gb|EGF51063.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056] Length = 1010 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 71/203 (34%), Gaps = 45/203 (22%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +YEK +++ +N ++A F + +P + V+RK+ + Y Y A Sbjct: 629 NALYEKGRSYVQSRNSNQAIATFRELLNKYPESPVSRKAATEIGLLYYQNDDYNHAIEAY 688 Query: 118 EEYITQYPESKNVDYVY------Y---------------LVGMSYAQMIRDVPYDQRATK 156 + I++YP S+ Y + G+ + A + Sbjct: 689 KYVISKYPGSEEARLAMRDLKSIYVEANRVDEFAALAAQMPGVIRFEPSEQDSLTYIAAE 748 Query: 157 L---------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 + R ++ Y N + A +Y+++ KE + + Sbjct: 749 KVYMKGEISPARESFIRYLQSYPNGAFSLNAHYYLSLI-----GKE---------QKDET 794 Query: 208 AAIPRFQLVLANYSDAEHAEEAM 230 A + +L Y D+ ++EEA+ Sbjct: 795 AVLEHTSKLLE-YPDSPYSEEAL 816 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 73/218 (33%), Gaps = 26/218 (11%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQA 113 Y Y A + +++++ A + F + + + ++ +A Sbjct: 516 YALAYYNLAYIAFHKKDYATAQDRFLKFIQLQKNGNATVLADAYNRIGDCYMHVRRFDEA 575 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + DY YY + + V Q+ + ++++ +Y NSP Sbjct: 576 RQYYTRAENL--GTPAGDYSYYQLAL--------VSGLQKNYDGKITLLNQLASKYPNSP 625 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y N L K GR Y++ AI F+ +L Y ++ + +A + Sbjct: 626 YA----------VNALYEK----GRSYVQSRNSNQAIATFRELLNKYPESPVSRKAATEI 671 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Y + A E + +YP AR +K Sbjct: 672 GLLYYQNDDYNHAIEAYKYVISKYPGSEEARLAMRDLK 709 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 44/126 (34%), Gaps = 8/126 (6%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y+ A++ ++N+ NQ + +P + A +L + QA + E Sbjct: 594 YYQLALVSGLQKNYDGKITLLNQLASKYPNSPYAVNALYEKGRSYVQSRNSNQAIATFRE 653 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + +YPES +G+ Y Q ++ ++ +Y S + A Sbjct: 654 LLNKYPESPVSRKAATEIGLLYYQNDD--------YNHAIEAYKYVISKYPGSEEARLAM 705 Query: 180 FYVTVG 185 + Sbjct: 706 RDLKSI 711 Score = 42.8 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 34/236 (14%), Positives = 74/236 (31%), Gaps = 40/236 (16%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115 +++ F +A YFNQ ++ + + Y + Q+AA Sbjct: 443 LFQLGTQSFANTQFEQAINYFNQSIAL---GQYNLQTKADALYWRGESYYRLNRMQEAAR 499 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQM--IRDVPYDQRATKLMLQYMSRIVERYTNSP 173 EY++ P+ KN + + ++Y + I D + ++ + N+ Sbjct: 500 NFNEYLSLAPQ-KNTE----MYALAYYNLAYIAFHKKDYATAQDRFLKFIQLQKN-GNAT 553 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKR-----------------------GEYVAAI 210 + A + + + R Y R Y I Sbjct: 554 VLADAYNRIGDCYMHVRR--FDEARQYYTRAENLGTPAGDYSYYQLALVSGLQKNYDGKI 611 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 + + Y ++ +A A+ +YV ++A + +YP+ +R Sbjct: 612 TLLNQLASKYPNSPYAVNALYEKGRSYVQSRNSNQAIATFRELLNKYPESPVSRKA 667 Score = 42.0 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 39/314 (12%), Positives = 83/314 (26%), Gaps = 82/314 (26%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA--- 76 +K ++ ++ L+ + S + + + +YE+ +++ F+ A Sbjct: 3 HKIYRIVYTALCCAPLLATAQTSEK---------ITSPQRLYEEGRNLFQQKAFAAAMSP 53 Query: 77 ----------------------------------------YEYFNQCSRDFPFAGVARKS 96 E +P A + Sbjct: 54 LHTFVKQLNAEGNPLFAAGDKEEAEYMLVCAEYELRSPNSIELLRSYLDVYPDTPHANRI 113 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + A + GKY +A ++ ++ D + Y + + + K Sbjct: 114 YALIASAYFFEGKYDEALAMFNSARLDLLSNEERDDMTYRLATCFLKT--------GNVK 165 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--------------------VEI 196 + + R T S Y +Y++ R E I Sbjct: 166 EAAIWFETL--RSTGSKYAADCTYYLSYIRYSQQRYENALSGFLSLQDNTKYKTLVPYYI 223 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 YL + Y A Q L+ Y + ++ E A EA E + + Sbjct: 224 AEIYLIKKNYDKAEIVAQNYLSAYPNQKYTGEMYRIQGTADYHSGKYHEAAEAFNQYLKD 283 Query: 257 YPQGYWARYVETLV 270 + R ++ Sbjct: 284 NVESTRRRDALYML 297 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 63/193 (32%), Gaps = 50/193 (25%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--LMSAF 102 + Y +S + E+ +L+ + +++ A E + +P + AR ++ L S + Sbjct: 656 NKYPESPVSRKAATEI---GLLYYQNDDYNHAIEAYKYVISKYPGSEEARLAMRDLKSIY 712 Query: 103 VQ------------------------------------YSAGKYQQAASLGEEYITQYPE 126 V+ Y G+ A Y+ YP Sbjct: 713 VEANRVDEFAALAAQMPGVIRFEPSEQDSLTYIAAEKVYMKGEISPARESFIRYLQSYPN 772 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 +Y Y +I D+ A L++ S+++E Y +SPY + A Sbjct: 773 GAFSLNAHY-----YLSLIGKEQKDETAV---LEHTSKLLE-YPDSPYSEEALLMRGEIL 823 Query: 187 NQLAAKEVEIGRY 199 E + Y Sbjct: 824 FNHKEYERALADY 836 Score = 38.9 bits (90), Expect = 0.72, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 63/202 (31%), Gaps = 27/202 (13%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 LD +++ Y A FLK N +A +F + A +++ Sbjct: 135 NSARLDLLSNEERDDMTYRLATCFLKTGNVKEAAIWFETLRST--GSKYAADCTYYLSYI 192 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 +YS +Y+ A S +++ +K V Y + Y ++ Sbjct: 193 RYSQQRYENALSG---FLSLQDNTKYKTLVPYYIAEIY--------LIKKNYDKAEIVAQ 241 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 + Y N Y + + + G+Y A F L + ++ Sbjct: 242 NYLSAYPNQKYTGEM-YRIQGTAD-------------YHSGKYHEAAEAFNQYLKDNVES 287 Query: 224 EHAEEAMARLVEAYVALALMDE 245 +A+ L +Y + + Sbjct: 288 TRRRDALYMLGMSYYQTGVYSQ 309 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 77/215 (35%), Gaps = 25/215 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A ++L ++N+ KA +P + + Y +GKY +AA +Y Sbjct: 221 YYIAEIYLIKKNYDKAEIVAQNYLSAYPNQKYTGEMYRIQGTADYHSGKYHEAAEAFNQY 280 Query: 121 ITQYPESKNVDYVYYLVGMSYAQM---------IRDVPYDQRA-----------TKLMLQ 160 + ES Y++GMSY Q + +V D+ A L L Sbjct: 281 LKDNVESTRRRDALYMLGMSYYQTGVYSQVPVILGEVTTDKDALTQNAYLHMGLAYLQLA 340 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 ++ + + A + A+ + + + ++ F+ L + Sbjct: 341 DRNKARMAFEQAA-ASDADQKIKE----QASYNYALCIHETSYSAFGESVTVFEHFLNEF 395 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 ++ +A++ LVE Y+ D A + + I Sbjct: 396 PNSVYADKVSNYLVEVYMNTRSYDAALKSIERIAR 430 >gi|293977887|ref|YP_003543317.1| hypothetical protein DMIN_01700 [Candidatus Sulcia muelleri DMIN] gi|292667818|gb|ADE35453.1| hypothetical protein DMIN_01700 [Candidatus Sulcia muelleri DMIN] Length = 324 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 63/172 (36%), Gaps = 16/172 (9%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-----MSAFVQYSAGKYQQA 113 EV +A K + + KA FN+ +K L A + KY A Sbjct: 55 EVVSEAEYLFKNKYYKKALINFNKIINK----SFLKKELYYNIIKKIALCYFYLKKYDLA 110 Query: 114 ASLGEEYITQYPESKNVDYV---YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 ++ ++ N D + +GM Y D + Q+ ++ + + Y Sbjct: 111 I----NFLKILLKTDNSDSAEENIFNLGMCYYLQSNDYFFFQKNRMKYIKIFLFLRKNYP 166 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 NS Y+ + L K+ IG YY +Y ++ F+ ++ +Y D Sbjct: 167 NSRYLPRIDKILYNAFITLKKKKESIGMYYFNTKKYNSSRIVFKQIINDYQD 218 >gi|241764617|ref|ZP_04762632.1| tol-pal system protein YbgF [Acidovorax delafieldii 2AN] gi|241365938|gb|EER60568.1| tol-pal system protein YbgF [Acidovorax delafieldii 2AN] Length = 256 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 48/126 (38%), Gaps = 8/126 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +E A+ + F++A F R +P +G + QY+A +Y++A + Sbjct: 139 FEAALAIFRSGKFAEANAAFAGFVRQYPRSGYVPSARFWLGNAQYAAREYKEAIGNFKLL 198 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +++ P +S I + + + T+ + + ++ Y S A+ Sbjct: 199 LSEAPNHARAPEA----ALS----IANCQIELKETRTARKTLEDLLRAYPQSEAAVAAKE 250 Query: 181 YVTVGR 186 + + Sbjct: 251 RLFRLK 256 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 47/143 (32%), Gaps = 22/143 (15%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A K +A + +GK+ +A + ++ QYP S V + +G + Sbjct: 134 AEKRDFEAALAIFRSGKFAEANAAFAGFVRQYPRSGYVPSARFWLGNAQYAA-------- 185 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R K + ++ N A + + +L KE R Sbjct: 186 REYKEAIGNFKLLLSEAPNHARAPEAALSIANCQIEL--KETRTAR------------KT 231 Query: 213 FQLVLANYSDAEHAEEAMARLVE 235 + +L Y +E A A RL Sbjct: 232 LEDLLRAYPQSEAAVAAKERLFR 254 Score = 42.0 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + V +Y S YV ARF++ + R EY AI F+L+ Sbjct: 153 EANAAFAGFVRQYPRSGYVPSARFWLGNAQ--------YAAR------EYKEAIGNFKLL 198 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 L+ + A EA + + L AR+ + + YPQ Sbjct: 199 LSEAPNHARAPEAALSIANCQIELKETRTARKTLEDLLRAYPQSE 243 >gi|23502551|ref|NP_698678.1| hypothetical protein BR1693 [Brucella suis 1330] gi|62290565|ref|YP_222358.1| hypothetical protein BruAb1_1678 [Brucella abortus bv. 1 str. 9-941] gi|82700481|ref|YP_415055.1| TPR repeat-containing molluscan rhodopsin [Brucella melitensis biovar Abortus 2308] gi|161619623|ref|YP_001593510.1| tol-pal system protein YbgF [Brucella canis ATCC 23365] gi|225628262|ref|ZP_03786296.1| tol-pal system protein YbgF [Brucella ceti str. Cudo] gi|225853149|ref|YP_002733382.1| Tol-Pal system protein YbgF [Brucella melitensis ATCC 23457] gi|256370102|ref|YP_003107613.1| hypothetical protein BMI_I1713 [Brucella microti CCM 4915] gi|260568780|ref|ZP_05839248.1| TPR repeat-containing protein [Brucella suis bv. 4 str. 40] gi|260755393|ref|ZP_05867741.1| tol-Pal system YbgF [Brucella abortus bv. 6 str. 870] gi|260758614|ref|ZP_05870962.1| tol-Pal system YbgF [Brucella abortus bv. 4 str. 292] gi|260762447|ref|ZP_05874784.1| tol-Pal system YbgF [Brucella abortus bv. 2 str. 86/8/59] gi|260884409|ref|ZP_05896023.1| tol-Pal system YbgF [Brucella abortus bv. 9 str. C68] gi|261222818|ref|ZP_05937099.1| tol-Pal system YbgF [Brucella ceti B1/94] gi|261315939|ref|ZP_05955136.1| tol-Pal system YbgF [Brucella pinnipedialis M163/99/10] gi|261316199|ref|ZP_05955396.1| tol-Pal system YbgF [Brucella pinnipedialis B2/94] gi|261325735|ref|ZP_05964932.1| tol-Pal system YbgF [Brucella neotomae 5K33] gi|261750849|ref|ZP_05994558.1| tol-Pal system YbgF [Brucella suis bv. 5 str. 513] gi|261757347|ref|ZP_06001056.1| TPR repeat-containing protein [Brucella sp. F5/99] gi|265987262|ref|ZP_06099819.1| tol-Pal system YbgF [Brucella pinnipedialis M292/94/1] gi|265995566|ref|ZP_06108123.1| tol-Pal system YbgF [Brucella melitensis bv. 3 str. Ether] gi|265998777|ref|ZP_06111334.1| tol-Pal system YbgF [Brucella ceti M490/95/1] gi|265999342|ref|ZP_05465891.2| TPR repeat-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|297248965|ref|ZP_06932673.1| periplasmic protein [Brucella abortus bv. 5 str. B3196] gi|23348551|gb|AAN30593.1| conserved domain protein [Brucella suis 1330] gi|62196697|gb|AAX74997.1| conserved domain protein [Brucella abortus bv. 1 str. 9-941] gi|82616582|emb|CAJ11661.1| TPR repeat:Molluscan rhodopsin C-terminal tail [Brucella melitensis biovar Abortus 2308] gi|161336434|gb|ABX62739.1| tol-pal system protein YbgF [Brucella canis ATCC 23365] gi|225616108|gb|EEH13156.1| tol-pal system protein YbgF [Brucella ceti str. Cudo] gi|225641514|gb|ACO01428.1| tol-pal system protein YbgF [Brucella melitensis ATCC 23457] gi|256000265|gb|ACU48664.1| hypothetical protein BMI_I1713 [Brucella microti CCM 4915] gi|260154164|gb|EEW89246.1| TPR repeat-containing protein [Brucella suis bv. 4 str. 40] gi|260668932|gb|EEX55872.1| tol-Pal system YbgF [Brucella abortus bv. 4 str. 292] gi|260672873|gb|EEX59694.1| tol-Pal system YbgF [Brucella abortus bv. 2 str. 86/8/59] gi|260675501|gb|EEX62322.1| tol-Pal system YbgF [Brucella abortus bv. 6 str. 870] gi|260873937|gb|EEX81006.1| tol-Pal system YbgF [Brucella abortus bv. 9 str. C68] gi|260921402|gb|EEX88055.1| tol-Pal system YbgF [Brucella ceti B1/94] gi|261295422|gb|EEX98918.1| tol-Pal system YbgF [Brucella pinnipedialis B2/94] gi|261301715|gb|EEY05212.1| tol-Pal system YbgF [Brucella neotomae 5K33] gi|261304965|gb|EEY08462.1| tol-Pal system YbgF [Brucella pinnipedialis M163/99/10] gi|261737331|gb|EEY25327.1| TPR repeat-containing protein [Brucella sp. F5/99] gi|261740602|gb|EEY28528.1| tol-Pal system YbgF [Brucella suis bv. 5 str. 513] gi|262553466|gb|EEZ09235.1| tol-Pal system YbgF [Brucella ceti M490/95/1] gi|262766850|gb|EEZ12468.1| tol-Pal system YbgF [Brucella melitensis bv. 3 str. Ether] gi|263093358|gb|EEZ17427.1| TPR repeat-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|264659459|gb|EEZ29720.1| tol-Pal system YbgF [Brucella pinnipedialis M292/94/1] gi|297174098|gb|EFH33455.1| periplasmic protein [Brucella abortus bv. 5 str. B3196] gi|326409707|gb|ADZ66772.1| Tol-Pal system protein YbgF [Brucella melitensis M28] Length = 488 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + S+ +Y+ A +L ++ A F + + +P + ++ Sbjct: 352 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 411 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G+Y +AA+L + YP+SK + +GM+ +M + ++ Sbjct: 412 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 463 Query: 165 IVERYTN 171 I +RY Sbjct: 464 IPQRYPK 470 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SL +A+ +G Y+ A + E++ +YP + +G S R Sbjct: 366 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 418 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y +S F + + ++ +V + Sbjct: 419 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 461 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY P ARF++ +G Y A Sbjct: 378 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 423 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F +Y D++ A E M +L A + D A + I +RYP+ Sbjct: 424 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 470 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 23/68 (33%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + YL G+Y AA F+ + Y EA L E+ EA + Sbjct: 368 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 427 Query: 254 QERYPQGY 261 Q YP Sbjct: 428 QRDYPDSK 435 >gi|306841412|ref|ZP_07474114.1| tol-pal system protein YbgF [Brucella sp. BO2] gi|306288518|gb|EFM59870.1| tol-pal system protein YbgF [Brucella sp. BO2] Length = 484 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + S+ +Y+ A +L ++ A F + + +P + ++ Sbjct: 348 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 407 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G+Y +AA+L + YP+SK + +GM+ +M + ++ Sbjct: 408 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 459 Query: 165 IVERYTN 171 I +RY Sbjct: 460 IPQRYPK 466 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SL +A+ +G Y+ A + E++ +YP + +G S R Sbjct: 362 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 414 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y +S F + + ++ +V + Sbjct: 415 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 457 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY P ARF++ +G Y A Sbjct: 374 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 419 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F +Y D++ A E M +L A + D A + I +RYP+ Sbjct: 420 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 466 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 23/68 (33%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + YL G+Y AA F+ + Y EA L E+ EA + Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423 Query: 254 QERYPQGY 261 Q YP Sbjct: 424 QRDYPDSK 431 >gi|261754102|ref|ZP_05997811.1| tol-Pal system YbgF [Brucella suis bv. 3 str. 686] gi|261743855|gb|EEY31781.1| tol-Pal system YbgF [Brucella suis bv. 3 str. 686] Length = 488 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + S+ +Y+ A +L ++ A F + + +P + ++ Sbjct: 352 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 411 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G+Y +AA+L + YP+SK + +GM+ +M + ++ Sbjct: 412 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 463 Query: 165 IVERYTN 171 I +RY Sbjct: 464 IPQRYPK 470 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SL +A+ +G Y+ A + E++ +YP + +G S R Sbjct: 366 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 418 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y +S F + + ++ +V + Sbjct: 419 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 461 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY P ARF++ +G Y A Sbjct: 378 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 423 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F +Y D++ A E M +L A + D A + I +RYP+ Sbjct: 424 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 470 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 23/68 (33%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + YL G+Y AA F+ + Y EA L E+ EA + Sbjct: 368 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 427 Query: 254 QERYPQGY 261 Q YP Sbjct: 428 QRDYPDSK 435 >gi|254703472|ref|ZP_05165300.1| TPR repeat-containing protein [Brucella suis bv. 3 str. 686] Length = 484 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + S+ +Y+ A +L ++ A F + + +P + ++ Sbjct: 348 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 407 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G+Y +AA+L + YP+SK + +GM+ +M + ++ Sbjct: 408 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 459 Query: 165 IVERYTN 171 I +RY Sbjct: 460 IPQRYPK 466 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SL +A+ +G Y+ A + E++ +YP + +G S R Sbjct: 362 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 414 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y +S F + + ++ +V + Sbjct: 415 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 457 Score = 39.3 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY P ARF++ +G Y A Sbjct: 374 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 419 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F +Y D++ A E M +L A + D A + I +RYP+ Sbjct: 420 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 466 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 23/68 (33%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + YL G+Y AA F+ + Y EA L E+ EA + Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423 Query: 254 QERYPQGY 261 Q YP Sbjct: 424 QRDYPDSK 431 >gi|253700248|ref|YP_003021437.1| lytic transglycosylase catalytic [Geobacter sp. M21] gi|251775098|gb|ACT17679.1| Lytic transglycosylase catalytic [Geobacter sp. M21] Length = 709 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 80/251 (31%), Gaps = 40/251 (15%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 F T + AV F S + E A ++ +++ A E Sbjct: 1 MFNRTAIAAAAVLFCTA---------LPASAVTFKPADEALASAASRMQAKDYRTAKEAA 51 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 ++ + + M ++++AA YP DY Y G+S Sbjct: 52 SKVNDKGVRS-------FMVGMAAARLEQWEEAAGQLATAADAYPI--LADYALYYQGLS 102 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 ++ R +DQ L + R++++Y S V+ A + + + LAA Sbjct: 103 LTKLER---HDQ-----ALTPLYRLLKQYPESRLVRAA---LILYSDTLAA--------- 142 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 G Y A + + Y + A+ L A + + I YP Sbjct: 143 --AGHYNEAQQSYSTFVERYPLGNDSISALYGSALCKEKLGDPIAAAKALRGIYLNYPAS 200 Query: 261 YWARYVETLVK 271 ++ ++ Sbjct: 201 PFSDKSARDLQ 211 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 56/165 (33%), Gaps = 8/165 (4%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K + +A L WE + + + +Y + + K + +A Sbjct: 57 KGVRSFMVGMAAARLEQWEEAAGQLATAADAYPILADYALYYQGLSLTKLERHDQALTPL 116 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + + +P + + R +L++ + +AG Y +A ++ +YP + Y + Sbjct: 117 YRLLKQYPESRLVRAALILYSDTLAAAGHYNEAQQSYSTFVERYPLGNDSISALYGSALC 176 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 ++ + + + I Y SP+ + + Sbjct: 177 KEKLGDPI--------AAAKALRGIYLNYPASPFSDKSARDLQRL 213 >gi|189024785|ref|YP_001935553.1| TPR repeat-containing protein [Brucella abortus S19] gi|237816071|ref|ZP_04595067.1| tol-pal system protein YbgF [Brucella abortus str. 2308 A] gi|254689862|ref|ZP_05153116.1| TPR repeat-containing protein [Brucella abortus bv. 6 str. 870] gi|254698013|ref|ZP_05159841.1| TPR repeat-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|254700355|ref|ZP_05162183.1| TPR repeat-containing protein [Brucella suis bv. 5 str. 513] gi|254708439|ref|ZP_05170267.1| TPR repeat-containing protein [Brucella pinnipedialis M163/99/10] gi|254708708|ref|ZP_05170519.1| TPR repeat-containing protein [Brucella pinnipedialis B2/94] gi|254730897|ref|ZP_05189475.1| TPR repeat-containing protein [Brucella abortus bv. 4 str. 292] gi|256030234|ref|ZP_05443848.1| TPR repeat-containing protein [Brucella pinnipedialis M292/94/1] gi|256061731|ref|ZP_05451868.1| TPR repeat-containing protein [Brucella neotomae 5K33] gi|256114262|ref|ZP_05455007.1| TPR repeat-containing protein [Brucella melitensis bv. 3 str. Ether] gi|256160409|ref|ZP_05458098.1| TPR repeat-containing protein [Brucella ceti M490/95/1] gi|256255615|ref|ZP_05461151.1| TPR repeat-containing protein [Brucella ceti B1/94] gi|256258116|ref|ZP_05463652.1| TPR repeat-containing protein [Brucella abortus bv. 9 str. C68] gi|260167909|ref|ZP_05754720.1| TPR repeat-containing protein [Brucella sp. F5/99] gi|294850946|ref|ZP_06791622.1| TPR repeat containing exported protein [Brucella sp. NVSL 07-0026] gi|189020357|gb|ACD73079.1| TPR repeat-containing protein [Brucella abortus S19] gi|237788734|gb|EEP62946.1| tol-pal system protein YbgF [Brucella abortus str. 2308 A] gi|294821589|gb|EFG38585.1| TPR repeat containing exported protein [Brucella sp. NVSL 07-0026] gi|326539414|gb|ADZ87629.1| tol-pal system protein YbgF [Brucella melitensis M5-90] Length = 484 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + S+ +Y+ A +L ++ A F + + +P + ++ Sbjct: 348 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 407 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G+Y +AA+L + YP+SK + +GM+ +M + ++ Sbjct: 408 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 459 Query: 165 IVERYTN 171 I +RY Sbjct: 460 IPQRYPK 466 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SL +A+ +G Y+ A + E++ +YP + +G S R Sbjct: 362 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 414 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y +S F + + ++ +V + Sbjct: 415 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 457 Score = 39.3 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY P ARF++ +G Y A Sbjct: 374 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 419 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F +Y D++ A E M +L A + D A + I +RYP+ Sbjct: 420 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 466 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 23/68 (33%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + YL G+Y AA F+ + Y EA L E+ EA + Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423 Query: 254 QERYPQGY 261 Q YP Sbjct: 424 QRDYPDSK 431 >gi|114765729|ref|ZP_01444827.1| hypothetical protein 1100011001327_R2601_12438 [Pelagibaca bermudensis HTCC2601] gi|114541946|gb|EAU44981.1| hypothetical protein R2601_12438 [Roseovarius sp. HTCC2601] Length = 276 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 14/129 (10%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ + +A L +F A + F FP + + +LL G + Sbjct: 153 EQNDFRRAQEALASGDFQGAADQFATFRETFPGSPLEPDALLAEGKALDQTGD---TRTA 209 Query: 117 GEEYIT---QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 ++ YPES + +G + + ++ ++ + RY +P Sbjct: 210 ARRFLDAYANYPESDAAPEALWRLGTALGAL--------QSVNEACVTLAEVGARYPGTP 261 Query: 174 YVKGARFYV 182 V A + Sbjct: 262 AVAEAEAEM 270 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 45/121 (37%), Gaps = 19/121 (15%) Query: 146 RDVPYDQRA-----TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 D Q A + + E + SP A LA G+ Sbjct: 155 NDFRRAQEALASGDFQGAADQFATFRETFPGSPLEPDA---------LLAE-----GKAL 200 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + G+ A RF ANY +++ A EA+ RL A AL ++EA ++ + RYP Sbjct: 201 DQTGDTRTAARRFLDAYANYPESDAAPEALWRLGTALGALQSVNEACVTLAEVGARYPGT 260 Query: 261 Y 261 Sbjct: 261 P 261 >gi|302187149|ref|ZP_07263822.1| tol-pal system protein YbgF [Pseudomonas syringae pv. syringae 642] Length = 208 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 81 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 193 PGTSAAQLAQRDLQRL 208 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 96 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 197 AAQLAQRDLQ 206 >gi|261219283|ref|ZP_05933564.1| tol-Pal system YbgF [Brucella ceti M13/05/1] gi|261322344|ref|ZP_05961541.1| tol-Pal system YbgF [Brucella ceti M644/93/1] gi|260924372|gb|EEX90940.1| tol-Pal system YbgF [Brucella ceti M13/05/1] gi|261295034|gb|EEX98530.1| tol-Pal system YbgF [Brucella ceti M644/93/1] Length = 488 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + S+ +Y+ A +L ++ A F + + +P + ++ Sbjct: 352 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 411 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G+Y +AA+L + YP+SK + +GM+ +M + ++ Sbjct: 412 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 463 Query: 165 IVERYTN 171 I +RY Sbjct: 464 IPQRYPK 470 Score = 43.6 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SL +A+ +G Y+ A + E++ +YP + +G S R Sbjct: 366 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 418 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y +S F + + ++ +V + Sbjct: 419 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 461 Score = 39.3 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY P ARF++ +G Y A Sbjct: 378 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 423 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F +Y D++ A E M +L A + D A + I +RYP+ Sbjct: 424 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 470 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 23/68 (33%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + YL G+Y AA F+ + Y EA L E+ EA + Sbjct: 368 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 427 Query: 254 QERYPQGY 261 Q YP Sbjct: 428 QRDYPDSK 435 >gi|330868620|gb|EGH03329.1| tol-pal system protein YbgF [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 262 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 8/131 (6%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 135 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 194 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 195 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 246 Query: 170 TNSPYVKGARF 180 + + A+ Sbjct: 247 PGTSAAQLAQR 257 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 150 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 196 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 197 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 250 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 251 AAQLAQRDLQ 260 >gi|213969193|ref|ZP_03397332.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] gi|213926191|gb|EEB59747.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] Length = 203 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 76 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 135 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 136 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 187 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 188 PGTSAAQLAQRDLQRL 203 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 91 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 137 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 138 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 191 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 192 AAQLAQRDLQ 201 >gi|260547190|ref|ZP_05822928.1| TPR repeat-containing protein [Brucella abortus NCTC 8038] gi|260095555|gb|EEW79433.1| TPR repeat-containing protein [Brucella abortus NCTC 8038] Length = 321 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + S+ +Y+ A +L ++ A F + + +P + ++ Sbjct: 185 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 244 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G+Y +AA+L + YP+SK + +GM+ +M + ++ Sbjct: 245 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 296 Query: 165 IVERYTN 171 I +RY Sbjct: 297 IPQRYPK 303 Score = 43.6 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SL +A+ +G Y+ A + E++ +YP + +G S R Sbjct: 199 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 251 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y +S F + + ++ +V + Sbjct: 252 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 294 Score = 38.9 bits (90), Expect = 0.68, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY P ARF++ +G Y A Sbjct: 211 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 256 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F +Y D++ A E M +L A + D A + I +RYP+ Sbjct: 257 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 303 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 23/68 (33%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + YL G+Y AA F+ + Y EA L E+ EA + Sbjct: 201 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 260 Query: 254 QERYPQGY 261 Q YP Sbjct: 261 QRDYPDSK 268 >gi|254714555|ref|ZP_05176366.1| TPR repeat-containing protein [Brucella ceti M644/93/1] gi|254717452|ref|ZP_05179263.1| TPR repeat-containing protein [Brucella ceti M13/05/1] Length = 484 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + S+ +Y+ A +L ++ A F + + +P + ++ Sbjct: 348 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 407 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G+Y +AA+L + YP+SK + +GM+ +M + ++ Sbjct: 408 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 459 Query: 165 IVERYTN 171 I +RY Sbjct: 460 IPQRYPK 466 Score = 43.6 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SL +A+ +G Y+ A + E++ +YP + +G S R Sbjct: 362 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 414 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y +S F + + ++ +V + Sbjct: 415 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 457 Score = 38.9 bits (90), Expect = 0.65, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY P ARF++ +G Y A Sbjct: 374 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 419 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F +Y D++ A E M +L A + D A + I +RYP+ Sbjct: 420 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 466 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 23/68 (33%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + YL G+Y AA F+ + Y EA L E+ EA + Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423 Query: 254 QERYPQGY 261 Q YP Sbjct: 424 QRDYPDSK 431 >gi|163845273|ref|YP_001622928.1| tol-pal system protein YbgF [Brucella suis ATCC 23445] gi|163675996|gb|ABY40106.1| tol-pal system protein YbgF [Brucella suis ATCC 23445] Length = 465 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + S+ +Y+ A +L ++ A F + + +P + ++ Sbjct: 329 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 388 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G+Y +AA+L + YP+SK + +GM+ +M + ++ Sbjct: 389 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 440 Query: 165 IVERYTN 171 I +RY Sbjct: 441 IPQRYPK 447 Score = 43.2 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SL +A+ +G Y+ A + E++ +YP + +G S R Sbjct: 343 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 395 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y +S F + + ++ +V + Sbjct: 396 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 438 Score = 38.9 bits (90), Expect = 0.70, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY P ARF++ +G Y A Sbjct: 355 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 400 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F +Y D++ A E M +L A + D A + I +RYP+ Sbjct: 401 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 447 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 23/68 (33%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + YL G+Y AA F+ + Y EA L E+ EA + Sbjct: 345 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 404 Query: 254 QERYPQGY 261 Q YP Sbjct: 405 QRDYPDSK 412 >gi|289626504|ref|ZP_06459458.1| tol-pal system protein YbgF [Pseudomonas syringae pv. aesculi str. NCPPB3681] Length = 248 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 8/131 (6%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 121 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 180 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 181 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 232 Query: 170 TNSPYVKGARF 180 + + A+ Sbjct: 233 PGTSAAQLAQR 243 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 136 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 182 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 183 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 236 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 237 AAQLAQRDLQ 246 >gi|239907804|ref|YP_002954545.1| hypothetical protein DMR_31680 [Desulfovibrio magneticus RS-1] gi|239797670|dbj|BAH76659.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 978 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 50/165 (30%), Gaps = 27/165 (16%) Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 AG Y + E I P S V +GM + Y + + Sbjct: 387 AGHYDEIQKALNEAINVNPNSYRVPETLLQLGMLNLR--------VGNIPEAKGYFNVLT 438 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 +Y A + G YY RGEY A ++ V+ + +++ Sbjct: 439 RKYP-----TDASVPMVN---------FAWGEYYFDRGEYKKAEEEYKNVVEKFPESKFV 484 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 E + + V L EA ++ Y W RY + Sbjct: 485 REGAMGMAKTLVRLGRYKEAAQIA-----DYIDKRWPRYYTEFPQ 524 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 78/236 (33%), Gaps = 51/236 (21%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 A ++ + +A + + + +P + + L ++ + Y G +++A + Sbjct: 492 AKTLVRLGRYKEAAQIADYIDKRWPRYYTEF-PQILRITGDIAYKNGDFKKARDCYMLFY 550 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P++K+ D V +G YA++ + + + ++ Y +S A+ Sbjct: 551 NMEPDAKDADLVLAKLGDIYARLGNKPG--------AVDFYNLAIKDYPDSEGGLVAKMR 602 Query: 182 VTV-------------------------------GRNQ-------LAAKEVEIGRYYLKR 203 + R+ LA +++ + L + Sbjct: 603 LAEQGVHDQPTISEMFPLFDKPQYGSPEEIYRSIIRDHPQSPLAPLAQ--LKLAMWLLHQ 660 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y ++ L Y +E A +A + A+ +A A + + Y + Sbjct: 661 QNYPGSLKESAAYLERYPQSELAPKAEETAITAFERMAADMLAHKDYDRLVAAYKE 716 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 73/216 (33%), Gaps = 32/216 (14%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 ++ + + N+ P + ++LL + G +A +YP + Sbjct: 387 AGHYDEIQKALNEAINVNPNSYRVPETLLQLGMLNLRVGNIPEAKGYFNVLTRKYPTDAS 446 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 V V + G Y D+ K + +VE++ S +V+ + +L Sbjct: 447 VPMVNFAWGEYYF--------DRGEYKKAEEEYKNVVEKFPESKFVREGAMGMAKTLVRL 498 Query: 190 AAKE--VEIG--------RYY--------------LKRGEYVAAIPRFQLVLANYSDAEH 225 + +I RYY K G++ A + L DA+ Sbjct: 499 GRYKEAAQIADYIDKRWPRYYTEFPQILRITGDIAYKNGDFKKARDCYMLFYNMEPDAKD 558 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A+ +A+L + Y L A + +L + YP Sbjct: 559 ADLVLAKLGDIYARLGNKPGAVDFYNLAIKDYPDSE 594 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 58/190 (30%), Gaps = 31/190 (16%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 TD + + + KA E + FP + R+ + A G+Y Sbjct: 442 PTDASVPMVNFAWGEYYFDRGEYKKAEEEYKNVVEKFPESKFVREGAMGMAKTLVRLGRY 501 Query: 111 QQAASLGEEYI-TQYPESKNVDYVYYLVGMSYAQMIRDVPYD----QRATKLMLQYMSRI 165 ++AA + + YI ++P YY + I + D K Sbjct: 502 KEAAQIAD-YIDKRWPR-------YY----TEFPQILRITGDIAYKNGDFKKARDCYMLF 549 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 ++ + G Y + G A+ + L + +Y D+E Sbjct: 550 YNMEPDAKDADLVLAKL--------------GDIYARLGNKPGAVDFYNLAIKDYPDSEG 595 Query: 226 AEEAMARLVE 235 A RL E Sbjct: 596 GLVAKMRLAE 605 Score = 35.5 bits (81), Expect = 8.2, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 39/116 (33%), Gaps = 15/116 (12%) Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I +P+S + M + K Y+ ERY S A Sbjct: 637 IRDHPQSPLAPLAQLKLAMWLLHQQNY----PGSLKESAAYL----ERYPQSELAPKAEE 688 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN---YSDAEHAEEAMARL 233 ++AA ++ + Y + VAA ++L+ N SD A+A L Sbjct: 689 TAITAFERMAA-DMLAHKDYDRL---VAAYKEYRLINTNRGLLSDTTRLGLALAYL 740 >gi|301384812|ref|ZP_07233230.1| tol-pal system protein YbgF [Pseudomonas syringae pv. tomato Max13] gi|302063534|ref|ZP_07255075.1| tol-pal system protein YbgF [Pseudomonas syringae pv. tomato K40] Length = 208 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 81 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 193 PGTSAAQLAQRDLQRL 208 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 96 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 197 AAQLAQRDLQ 206 >gi|331016447|gb|EGH96503.1| tol-pal system protein YbgF [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 208 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 81 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 193 PGTSAAQLAQRDLQRL 208 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 96 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 197 AAQLAQRDLQ 206 >gi|213161789|ref|ZP_03347499.1| hypothetical protein Salmoneentericaenterica_18034 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 152 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F + +P + + + Y+ GK AA Sbjct: 35 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 94 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S Y VG+ + D+ T +++ +Y + K A+ Sbjct: 95 VVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQ 146 Query: 180 FYVTVG 185 + Sbjct: 147 KRLNAM 152 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + +++Y +S Y A +++ Sbjct: 31 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN----------- 79 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 80 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKY 136 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 137 PGTDGAKQAQK 147 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I +YP+S Y +G + Y + +V+ Y Sbjct: 49 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 100 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A + V V +G+ A +Q V+ Y + A++A Sbjct: 101 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 146 Query: 231 ARL 233 RL Sbjct: 147 KRL 149 >gi|186684702|ref|YP_001867898.1| TPR repeat-containing serine/threonin protein kinase [Nostoc punctiforme PCC 73102] gi|186467154|gb|ACC82955.1| serine/threonine protein kinase with TPR repeats [Nostoc punctiforme PCC 73102] Length = 687 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 54/155 (34%), Gaps = 18/155 (11%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K L + IA ++G Q+E+Y++ + N+ A + F Sbjct: 278 KKLLIVLAGIAGLIILGVGVW----FLNLPKPINNAQKELYQEGLDKYDAGNYEGAVKDF 333 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 N P +A Y G Y+QA + + I P+ N Y+ G + Sbjct: 334 NHVIELDPKNALAYN---KRGDTYYRLGDYEQAQADSSQAILLNPQDGN---AYFDRGFA 387 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 ++++ K + ++ ++ ++ Y Sbjct: 388 FSEL--------GKYKEAIADYTQAIKLNSDDAYA 414 >gi|189465275|ref|ZP_03014060.1| hypothetical protein BACINT_01621 [Bacteroides intestinalis DSM 17393] gi|189437549|gb|EDV06534.1| hypothetical protein BACINT_01621 [Bacteroides intestinalis DSM 17393] Length = 1010 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 33/73 (45%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +YEK +++ N +A F + +P + V+RK+ + Y Y +A Sbjct: 629 NALYEKGRSYVQTNNSRQAIAAFKELLDKYPESPVSRKAAAEIGLLYYQNDDYDRAIEAY 688 Query: 118 EEYITQYPESKNV 130 + +TQYP S+ Sbjct: 689 KHVVTQYPGSEEA 701 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 76/225 (33%), Gaps = 36/225 (16%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK---- 109 Y Y A + E++++ A F + ++ + A G Sbjct: 514 ETYALAYYNLAYIAFHEKDYTLAQNRFLKFTQL----EKGENAT-ALADAYNRIGDCHLH 568 Query: 110 ---YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 + +A + + DY +Y + + V Q+ + ++R+ Sbjct: 569 VRRFDEAKQYYNKAENM--GTPAGDYSFYQLAL--------VAGLQKDYDGKVALLNRLS 618 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 +Y NSPY N L K GR Y++ AI F+ +L Y ++ + Sbjct: 619 GKYPNSPYA----------INALYEK----GRSYVQTNNSRQAIAAFKELLDKYPESPVS 664 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 +A A + Y D A E + +YP AR +K Sbjct: 665 RKAAAEIGLLYYQNDDYDRAIEAYKHVVTQYPGSEEARLAMRDLK 709 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 76/304 (25%), Gaps = 80/304 (26%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD----- 86 +C + + + +T + +Y++ +++ ++ A R Sbjct: 9 LCTALCCAPLLATAQTSEKIT---SPQRLYQEGQSLFQQKAYAAAIPPLQAFVRQVDAEG 65 Query: 87 --------------------------------------FPFAGVARKSLLMSAFVQYSAG 108 +P A + + A V + G Sbjct: 66 KPLPAEGERMEAEYMLVCAAYELKDTKSIDKLRAYLDEYPDTPYANRIYALMASVYFFEG 125 Query: 109 KYQQAAS--LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y A + ++ D + Y + Y + K + + Sbjct: 126 NYDAAMAMFNASRLDLL--GNEERDDMTYRLATCYLKT--------GNVKEAAIWFETL- 174 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKRGEY 206 R T+ YV +Y++ R + I YL + Y Sbjct: 175 -RSTSKKYVADCTYYLSYIRYTQQRYDDALTGFLSLQDNEKYKALAPYYIAEIYLIKKNY 233 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 A Q L+ Y + E+ E L +A EA + R Sbjct: 234 DKAEIVAQNYLSAYPNNEYTAEMYRVLGDADYHFGKYHEAMGAFEKYLANNKEEAPRRDA 293 Query: 267 ETLV 270 ++ Sbjct: 294 LYML 297 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 63/183 (34%), Gaps = 51/183 (27%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--LMSAF 102 D Y +S + E+ +L+ + ++ +A E + +P + AR ++ L S + Sbjct: 656 DKYPESPVSRKAAAEI---GLLYYQNDDYDRAIEAYKHVVTQYPGSEEARLAMRDLKSIY 712 Query: 103 VQ------------------------------------YSAGKYQQAASLGEEYITQYPE 126 V Y G A + Y+ YP Sbjct: 713 VDANRVDEFAELAAKVPGEIRFDASEQDSLTYIAAEKVYMKGDIAPAKASFTRYLLSYPN 772 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-RFYVTVG 185 +Y + + + +Q+ + +L++ +++E Y ++PY + A + Sbjct: 773 GAFSLNAHYYLCV--------IGKEQKDEEAVLEHAGKLLE-YPDTPYSQEALIARAEIL 823 Query: 186 RNQ 188 N+ Sbjct: 824 FNR 826 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 58/190 (30%), Gaps = 27/190 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A +LK N +A +F ++++Y+ +Y A + + Sbjct: 152 YRLATCYLKTGNVKEAAIWFETLRST--SKKYVADCTYYLSYIRYTQQRYDDALTG---F 206 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 ++ K Y + Y ++ + Y N+ Y Sbjct: 207 LSLQDNEKYKALAPYYIAEIY--------LIKKNYDKAEIVAQNYLSAYPNNEYTAEMYR 258 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + Y+ G+Y A+ F+ LAN + +A+ L +Y Sbjct: 259 VLGD------------ADYHF--GKYHEAMGAFEKYLANNKEEAPRRDALYMLGLSYYHS 304 Query: 241 ALMDEAREVV 250 + +A + Sbjct: 305 GVYTKAANTL 314 Score = 35.9 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 18/173 (10%), Positives = 48/173 (27%), Gaps = 22/173 (12%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++ + + +Y + + ++KA + + +++ + L Sbjct: 278 EKYLANNKEEAPRRDALYMLGLSYYHSGVYTKAANTLGEVATGN--DALSQNAYLHMGLS 335 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 G +A E+ + + Y + + A + Sbjct: 336 YLQMGDKNKARMAFEQASASNANMQIKEQAAYNYALCIHETSYS------AFGESVTVFE 389 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + + NS YV Y+ Y+ Y AA+ + + Sbjct: 390 KFLNEFPNSQYVDKVSSYLVEV--------------YMNTRSYEAALKSIERI 428 >gi|330950599|gb|EGH50859.1| tol-pal system protein YbgF [Pseudomonas syringae Cit 7] Length = 208 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 81 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 193 PGTSAAQLAQRDLQRL 208 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 96 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 197 AAQLAQRDLQ 206 >gi|218885367|ref|YP_002434688.1| tol-pal system protein YbgF [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756321|gb|ACL07220.1| tol-pal system protein YbgF [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 333 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 15/121 (12%), Positives = 48/121 (39%), Gaps = 8/121 (6%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y++ + E+ + + + F + F + + + + ++A E+ Sbjct: 215 LYDQGMTAFNERRYKDSVKAFTDFTNTFGDHKLTSNAWFWQGEANFQQQDFARSALAYEQ 274 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I++YP+S G+ + ++ + D + + ++++ +SP + A+ Sbjct: 275 VISKYPKSPKYASSLLKQGICFYKLGK---KDAGKVR-----LEELIKKLPDSPEAQRAK 326 Query: 180 F 180 Sbjct: 327 K 327 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 45/131 (34%), Gaps = 22/131 (16%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++ +Y+ + ++ + + K ++ G + Q Q + L Y + Sbjct: 223 FNERRYKDSVKAFTDFTNTFGDHKLTSNAWFWQGEANFQQ-------QDFARSALAY-EQ 274 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 ++ +Y SP + + +L K+ A R + ++ D+ Sbjct: 275 VISKYPKSPKYASSLLKQGICFYKLGKKD--------------AGKVRLEELIKKLPDSP 320 Query: 225 HAEEAMARLVE 235 A+ A L E Sbjct: 321 EAQRAKKFLSE 331 Score = 35.9 bits (82), Expect = 6.7, Method: Composition-based stats. Identities = 15/145 (10%), Positives = 40/145 (27%), Gaps = 38/145 (26%) Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA--------RFYVTVG 185 Y GM+ +R K ++ + + + A Sbjct: 215 LYDQGMTAFN--------ERRYKDSVKAFTDFTNTFGDHKLTSNAWFWQGEANFQQQDFA 266 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 R+ LA ++ V++ Y + ++ + + L D Sbjct: 267 RSALA----------------------YEQVISKYPKSPKYASSLLKQGICFYKLGKKDA 304 Query: 246 AREVVSLIQERYPQGYWARYVETLV 270 + + + ++ P A+ + + Sbjct: 305 GKVRLEELIKKLPDSPEAQRAKKFL 329 >gi|330964832|gb|EGH65092.1| tol-pal system protein YbgF [Pseudomonas syringae pv. actinidiae str. M302091] Length = 208 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 81 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 193 PGTSAAQLAQRDLQRL 208 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 96 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 197 AAQLAQRDLQ 206 >gi|330872645|gb|EGH06794.1| tol-pal system protein YbgF [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 208 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 81 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 193 PGTSAAQLAQRDLQRL 208 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 96 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 197 AAQLAQRDLQ 206 >gi|257487002|ref|ZP_05641043.1| hypothetical protein PsyrptA_27255 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330988977|gb|EGH87080.1| tol-pal system protein YbgF [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009356|gb|EGH89412.1| tol-pal system protein YbgF [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 208 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 81 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 193 PGTSAAQLAQRDLQRL 208 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 96 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 197 AAQLAQRDLQ 206 >gi|70732081|ref|YP_261837.1| hypothetical protein PFL_4756 [Pseudomonas fluorescens Pf-5] gi|68346380|gb|AAY93986.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5] Length = 270 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 8/131 (6%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ Y+ A +K ++F KA + F+ R +P + A + V + G Sbjct: 143 EPGDPAKEKLYYDAAFDLIKAKDFDKASQAFSAFLRKYPNSQYAGNAQYWLGEVNLAKGD 202 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + YP+ V Y + DV T + + ++V +Y Sbjct: 203 LQGAGQAFAKVSQLYPKHAKVPDSLYKLA--------DVERRLGHTDRVKGILQQVVAQY 254 Query: 170 TNSPYVKGARF 180 + + A+ Sbjct: 255 PGTSAAQLAQR 265 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 52/147 (35%), Gaps = 22/147 (14%) Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 P + +YY +I+ +D Q S + +Y NS Y A++++ Sbjct: 144 PGDPAKEKLYYDAA---FDLIKAKDFD-----KASQAFSAFLRKYPNSQYAGNAQYWLGE 195 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 LA +++ A F V Y +++ +L + L D Sbjct: 196 VN--LAKGDLQ------------GAGQAFAKVSQLYPKHAKVPDSLYKLADVERRLGHTD 241 Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271 + ++ + +YP A+ + ++ Sbjct: 242 RVKGILQQVVAQYPGTSAAQLAQRDLQ 268 >gi|329295950|ref|ZP_08253286.1| tol-pal system protein YbgF [Plautia stali symbiont] Length = 205 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 49/143 (34%), Gaps = 9/143 (6%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 + + Y AV L+++ + ++ + +P + + Sbjct: 71 SNTAAAAPAQTGDANTDYNAAVALILEKKQYDQSITALQAWVKKYPDSTYQPNANYWLGQ 130 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + Y+ GK AA + YP+S + VG+ + ++ T Sbjct: 131 LFYNKGKKDDAAYYFATVVKNYPKSPKAAEALFKVGV--------IMQEKNDTAKAKAVY 182 Query: 163 SRIVERYTNSPYVKGARFYVTVG 185 ++++++ NS K A+ + Sbjct: 183 QQVIKQFPNSESAKQAQKRLAAM 205 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 43/112 (38%), Gaps = 14/112 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + V++Y +S Y A +++ +Y K + AA F V Sbjct: 103 QSITALQAWVKKYPDSTYQPNANYWLGQL-------------FYNKGKKDDAA-YYFATV 148 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + NY + A EA+ ++ +A+ V + +++P A+ + Sbjct: 149 VKNYPKSPKAAEALFKVGVIMQEKNDTAKAKAVYQQVIKQFPNSESAKQAQK 200 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 48/127 (37%), Gaps = 22/127 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y Q+ + + ++ +YP+S Y +G + + Y + +V+ Sbjct: 99 KQYDQSITALQAWVKKYPDSTYQPNANYWLGQLFYNKGKKDD--------AAYYFATVVK 150 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SP A F V V ++ + A +Q V+ + ++E A+ Sbjct: 151 NYPKSPKAAEALFKVGVIMQ--------------EKNDTAKAKAVYQQVIKQFPNSESAK 196 Query: 228 EAMARLV 234 +A RL Sbjct: 197 QAQKRLA 203 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ +Y +I Q + Y D+ + A L + + D+A + + + YP+ Sbjct: 96 LEKKQYDQSITALQAWVKKYPDSTYQPNANYWLGQLFYNKGKKDDAAYYFATVVKNYPKS 155 Query: 261 YWARYVETLVK 271 + E L K Sbjct: 156 --PKAAEALFK 164 >gi|313202057|ref|YP_004040715.1| tol-pal system protein ybgf [Methylovorus sp. MP688] gi|312441373|gb|ADQ85479.1| tol-pal system protein YbgF [Methylovorus sp. MP688] Length = 270 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 55/138 (39%), Gaps = 8/138 (5%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 + + + + A L+ F ++++ + + + +P + A ++ F Q+S Sbjct: 136 VTEAPASSSEAKDLDAANALLQASKFKESFDAYQKFLQAYPASTHAADAMYGLGFSQFSL 195 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 Y+ A + ++ + QYP+S + + S I+ D + + ++ Sbjct: 196 KNYKAAIATQQKLLKQYPDSAKAPEASFNIANS---QIQLADID-----GAKKTLRDLIS 247 Query: 168 RYTNSPYVKGARFYVTVG 185 +Y S + A+ + V Sbjct: 248 QYPKSDVIPHAQSRLKVL 265 Score = 55.9 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 46/116 (39%), Gaps = 14/116 (12%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 K + ++ Y S + A + + + L Y AAI Q Sbjct: 162 KESFDAYQKFLQAYPASTHAADAMYGLGFSQFSL--------------KNYKAAIATQQK 207 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 +L Y D+ A EA + + + LA +D A++ + + +YP+ + ++ +K Sbjct: 208 LLKQYPDSAKAPEASFNIANSQIQLADIDGAKKTLRDLISQYPKSDVIPHAQSRLK 263 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 53/136 (38%), Gaps = 22/136 (16%) Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 L +A A K++++ ++++ YP S + Y +G S + + K Sbjct: 149 LDAANALLQASKFKESFDAYQKFLQAYPASTHAADAMYGLGFSQFSL--------KNYKA 200 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + +++++Y +S A F + + QLA + A + ++ Sbjct: 201 AIATQQKLLKQYPDSAKAPEASFNIANSQIQLADID--------------GAKKTLRDLI 246 Query: 218 ANYSDAEHAEEAMARL 233 + Y ++ A +RL Sbjct: 247 SQYPKSDVIPHAQSRL 262 >gi|289674680|ref|ZP_06495570.1| tol-pal system protein YbgF [Pseudomonas syringae pv. syringae FF5] gi|330936709|gb|EGH40897.1| tol-pal system protein YbgF [Pseudomonas syringae pv. pisi str. 1704B] gi|330975319|gb|EGH75385.1| tol-pal system protein YbgF [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 208 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 81 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 193 PGTSAAQLAQRDLQRL 208 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 96 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 197 AAQLAQRDLQ 206 >gi|167763754|ref|ZP_02435881.1| hypothetical protein BACSTE_02134 [Bacteroides stercoris ATCC 43183] gi|167697870|gb|EDS14449.1| hypothetical protein BACSTE_02134 [Bacteroides stercoris ATCC 43183] Length = 1010 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%) Query: 49 DSVTDVRYQ-REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 D + Y +YEK +++ +N S+A F + +P + V+RK+ + Y Sbjct: 619 DKYPNSPYAVSALYEKGRSYVQGRNNSQAIATFRELLNKYPESPVSRKAATEIGLLYYQN 678 Query: 108 GKYQQAASLGEEYITQYPESKNV 130 Y +A + ITQYP S+ Sbjct: 679 DDYNRAIEAYKYVITQYPGSEEA 701 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 76/223 (34%), Gaps = 36/223 (16%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK------ 109 Y Y A + +++++ A + F + + A + + A G Sbjct: 516 YALAYYNLAYIAFHKKDYATAQDRFLKFIQL----RKAGDATV-LADAYNRVGDCYMQVR 570 Query: 110 -YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + +A + DY YY + + YD + T ++R+ ++ Sbjct: 571 RFDEAKQYYTRAENL--GTPAGDYSYYQLALVSGLQK---DYDGKIT-----LLNRLADK 620 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y NSPY A E GR Y++ AI F+ +L Y ++ + + Sbjct: 621 YPNSPYAVSAL--------------YEKGRSYVQGRNNSQAIATFRELLNKYPESPVSRK 666 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 A + Y + A E + +YP AR +K Sbjct: 667 AATEIGLLYYQNDDYNRAIEAYKYVITQYPGSEEARLAMRDLK 709 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 37/253 (14%), Positives = 70/253 (27%), Gaps = 59/253 (23%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD-----FPFAGVA--RKSLLMSAFVQY 105 + + +YE+ +++ F+ A + P + ++ M +Y Sbjct: 27 KITSPQRLYEEGESLFRQKAFAAAMPPLQAFIKQTDAEGAPVSAAGNKEEAEYMLVCAEY 86 Query: 106 SAGKYQQAASLGEEYITQYPESKNV-----------------DYVYYLVGMSYAQMIRDV 148 + L EY+ YP++ + D + S ++ + Sbjct: 87 ELRN-PNSIELLREYLDAYPDTPHANRICALIASAYFFEGKYDDALAMFNSSRLDLLSNE 145 Query: 149 PYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR-------NQL 189 D K + + R T S Y +Y+ R + L Sbjct: 146 ERDDMTYRLATCYLKTGNVKEAAIWFETL--RSTGSRYTADCTYYLAYIRYSQQRYDDAL 203 Query: 190 ---------AAKE----VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 A E I YL + Y A Q L+ Y + ++ E A Sbjct: 204 NGFLSLQDNAKYEALVPYYIAEIYLIKKNYDKAEIVAQNYLSAYPNQKYTGEMYRIQGTA 263 Query: 237 YVALALMDEAREV 249 EA + Sbjct: 264 DYHFGKYHEAIKA 276 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 59/175 (33%), Gaps = 50/175 (28%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--LMSAF 102 + Y +S + E+ +L+ + ++++A E + +P + AR ++ L S + Sbjct: 656 NKYPESPVSRKAATEI---GLLYYQNDDYNRAIEAYKYVITQYPGSEEARLAMRDLKSIY 712 Query: 103 VQ------------------------------------YSAGKYQQAASLGEEYITQYPE 126 V+ Y G+ A Y+ YP Sbjct: 713 VEANRVDEFAALAAQMPGVIRFEPNEQDSLTYIAAEKVYMKGEIIPARESFTRYLQSYPN 772 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 +Y Y +I D+ L++ +++E Y +SPY + A Sbjct: 773 GAFSLNAHY-----YLSLIGKEQKDETGV---LEHTGKLLE-YPDSPYSEEALLM 818 >gi|148559585|ref|YP_001259547.1| TPR repeat-containing molluscan rhodopsin [Brucella ovis ATCC 25840] gi|148370842|gb|ABQ60821.1| TPR repeat:Molluscan rhodopsin C- tail [Brucella ovis ATCC 25840] Length = 488 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + S+ +Y+ A +L ++ A F + + +P + ++ Sbjct: 352 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 411 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G+Y +AA+L + YP+SK + +GM+ +M + ++ Sbjct: 412 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 463 Query: 165 IVERYTN 171 I +RY Sbjct: 464 IPQRYPK 470 Score = 43.2 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SL +A+ +G Y+ A + E++ +YP + +G S R Sbjct: 366 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 418 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y +S F + + ++ +V + Sbjct: 419 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 461 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY P ARF++ +G Y A Sbjct: 378 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 423 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F +Y D++ A E M +L A + D A + I +RYP+ Sbjct: 424 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 470 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 23/68 (33%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + YL G+Y AA F+ + Y EA L E+ EA + Sbjct: 368 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 427 Query: 254 QERYPQGY 261 Q YP Sbjct: 428 QRDYPDSK 435 >gi|220925334|ref|YP_002500636.1| tol-pal system protein YbgF [Methylobacterium nodulans ORS 2060] gi|219949941|gb|ACL60333.1| tol-pal system protein YbgF [Methylobacterium nodulans ORS 2060] Length = 304 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 8/99 (8%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 K+ A+ +Y+QA ++I +P V Y +G +Y Q R Sbjct: 179 KADYEMAYAYVLQRQYEQAEMSLRQFIQSHPRDALVPDATYWLGETYLQRNR-------- 230 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 T+ + ++ Y S A + N L A+E Sbjct: 231 TREAAEQFLKVSTDYARSRKAPEAMLKLGASLNALGARE 269 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 46/110 (41%), Gaps = 14/110 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 QR + + + ++ + V A +++ G YL+R A Sbjct: 191 QRQYEQAEMSLRQFIQSHPRDALVPDATYWL--------------GETYLQRNRTREAAE 236 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +F V +Y+ + A EAM +L + AL ++A ++ ++ ++PQ Sbjct: 237 QFLKVSTDYARSRKAPEAMLKLGASLNALGAREQACATLAELERKFPQAS 286 >gi|153805821|ref|ZP_01958489.1| hypothetical protein BACCAC_00058 [Bacteroides caccae ATCC 43185] gi|149130498|gb|EDM21704.1| hypothetical protein BACCAC_00058 [Bacteroides caccae ATCC 43185] Length = 1005 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 76/269 (28%), Gaps = 55/269 (20%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 +C + D T +Y++ +E+N++ A + P A Sbjct: 9 ICATICCAPIIGFAQTGDKFT---SADNLYKEGKELFQEKNYAAALPALKAFVKQKPTAS 65 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--------- 142 + + + M Y + L +Y+ YP++ + +Y L+ Y Sbjct: 66 LLQDAEYMLVSSAYELNDKNR-IELLRKYLDHYPDTPYANRIYSLLASCYFYEGKYDEAM 124 Query: 143 --------QMIRDVPYDQR------------ATKLMLQYMSRIVERYTNSPYVKGARFYV 182 ++ + D R + + + Y +Y+ Sbjct: 125 ALFNSTDLDLLNNEERDDRTYQLATCYLKTNDLREAAIWFETLRANSP--KYATDCDYYI 182 Query: 183 TVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + R I Y++ Y A Q L+ Y + Sbjct: 183 SYIRYTQKRYNEALKGFLPLQDNAKYKALVPYYIAEIYVQLKNYDKAQIVAQNYLSAYPN 242 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS 251 EHA E L +AY +A E S Sbjct: 243 NEHAAEMYRILGDAYYHFGQYPQAVEAFS 271 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 73/214 (34%), Gaps = 28/214 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y + +++++A YF + + +A + +++A Sbjct: 513 YNLGYIAFHRKDYTQASNYFQKYIQLEKGENTTALA-DAYNRIGDCHLHVRNFEEAKHYY 571 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + + + DY +Y + + + ++R+V +Y SPY Sbjct: 572 SQAEQMN--TPSGDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPASPYAVN 621 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A E GR Y+ AI F+ +L Y ++ + +A A + + Sbjct: 622 AI--------------YEKGRSYVLMDNNNQAITSFKELLNKYPESPVSRKAAAEIGLLF 667 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++A E + E+YP AR +K Sbjct: 668 YQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 34/80 (42%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +YEK ++ N ++A F + +P + V+RK+ + Y G Y Sbjct: 614 PASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLNKYPESPVSRKAAAEIGLLFYQKGDY 673 Query: 111 QQAASLGEEYITQYPESKNV 130 QA ++ I +YP S+ Sbjct: 674 NQAIEAYKQVIEKYPGSEEA 693 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 46/125 (36%), Gaps = 8/125 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A++ +++++ N+ +P + A ++ QA + +E Sbjct: 587 YQLALVSGLQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKEL 646 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +YPES +G+ + Q ++ +++E+Y S + A Sbjct: 647 LNKYPESPVSRKAAAEIGLLFYQK--------GDYNQAIEAYKQVIEKYPGSEEARLAMR 698 Query: 181 YVTVG 185 + Sbjct: 699 DLKSI 703 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 77/220 (35%), Gaps = 36/220 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A ++++ +N+ KA +P A + + Y G+Y QA Y Sbjct: 214 YYIAEIYVQLKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYPQAVEAFSNY 273 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + + D Y++G+SY Q + + + ++ N + A Sbjct: 274 LDREHAVPRRD-ALYMLGLSYYQT--------KVYSKAAETLGKVTTE--NDALTQNAYL 322 Query: 181 YVTVGRNQLAAK---------------EVEI---GRYYL-------KRGEYVAAIPRFQL 215 ++ + QLA K ++I Y + ++ F+ Sbjct: 323 HMGLSYLQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFSAFGESVTAFEK 382 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 L + + +AE+ + LVE Y+ D A + + I + Sbjct: 383 FLNEFPTSPYAEKVSSYLVEVYMNTRSYDAALKSIDRIAK 422 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 77/218 (35%), Gaps = 26/218 (11%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--L 98 S +++ ++ E +LF ++ ++++A E + Q +P + AR ++ L Sbjct: 641 TSFKELLNKYPESPVSRKAAAEIGLLFYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDL 700 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 S +V + A + P D ++Y + + Sbjct: 701 KSIYVDLNRIDEFAALANAM------PGHIRFD-ANEQDSLTYTAAEKIYMK--GRMEEA 751 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 +++ ++ + + A +Y+ + ++ ++ + L G+ L Sbjct: 752 KTSLNKYLQTFPEGAFSLNAHYYLCLIGSEQKNYDMIL----LHSGK-----------LL 796 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 Y + AEEA+ E EA +++E+ Sbjct: 797 EYPNNPFAEEALILRAEVQFNQQNTAEALASYKMLKEK 834 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 50/165 (30%), Gaps = 22/165 (13%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 YLD V + +Y + + + + +SKA E + + + + + + L Sbjct: 273 YLDREHAVPRRDALYMLGLSYYQTKVYSKAAETLGKVTTEN--DALTQNAYLHMGLSYLQ 330 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 + +A E+ + + Y + + A + + + Sbjct: 331 LAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFS------AFGESVTAFEKFL 384 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + SPY + Y+ Y+ Y AA+ Sbjct: 385 NEFPTSPYAEKVSSYLVEV--------------YMNTRSYDAALK 415 >gi|317153857|ref|YP_004121905.1| tetratricopeptide domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316944108|gb|ADU63159.1| tetratricopeptide domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 1061 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 14/103 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Y + + Y + + G YY K G+Y+ A +FQ + Sbjct: 509 EAKAYFKVLQDNYPDDDNIPSIS--------------YYWGEYYYKMGDYLKAADQFQYL 554 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + Y + + +EA L ++ +++A ++V I +R+P Sbjct: 555 IQTYPEHQLVKEAAYYLADSLNRTGFVEQAYQIVDYIDKRWPD 597 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 41/274 (14%), Positives = 67/274 (24%), Gaps = 88/274 (32%) Query: 73 FSKAYEYFNQCSRDFP-----------FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 F +A YF ++P + Y G Y +AA + I Sbjct: 507 FPEAKAYFKVLQDNYPDDDNIPSISYYWGEY-----------YYKMGDYLKAADQFQYLI 555 Query: 122 TQYPESKNVDYVYYLVGMS-----------------------YAQMIRDVPYDQRATKLM 158 YPE + V Y + S Y + ++ Sbjct: 556 QTYPEHQLVKEAAYYLADSLNRTGFVEQAYQIVDYIDKRWPDYYMENAEFLRLAGGVEMA 615 Query: 159 LQYMSRIVERY-------TNSPYVKGARFYVTVGRNQLAA-------KEVEIGRY----- 199 L + Y +S + + E + Y Sbjct: 616 LDKLQEAKNHYFTYYNLNPDSEGADVVLARIGDIYVRQGEKGAAKQIYERAVLDYPDKEG 675 Query: 200 -------------YLK--RGEYVAAIPR---------FQLVLANYSDAEHAEEAMARLVE 235 Y G+ V+ R +Q ++ Y D+ A A +L Sbjct: 676 GLIARMRLAEEGIYDDPTMGDMVSVFDRPYNLRPEMIYQEIVERYPDSPLAPIAQLKLAM 735 Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 + EA + E+YP R TL Sbjct: 736 WHAFNKQYPEALGAAQDLIEKYPDSPLVRTARTL 769 >gi|262197144|ref|YP_003268353.1| hypothetical protein Hoch_3961 [Haliangium ochraceum DSM 14365] gi|262080491|gb|ACY16460.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM 14365] Length = 1058 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 23/140 (16%) Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + A+L + + ++P+ + D V YLVG + +Q+ + L+Y ++VER Sbjct: 161 DLDEPAALYRQLLAEFPQFRRADLVLYLVGFA--------AREQQQYQESLEYFGQVVER 212 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y +SP A + IG +Y G++ A + VLA D+ + Sbjct: 213 YPDSPLYGDAW--------------MMIGEHYFSTGQWPEARAAYANVLAR-PDSPTYDL 257 Query: 229 AMARLVEAYVALALMDEARE 248 A+ + A L D A Sbjct: 258 ALFKTAWADWKLGDPDLAAR 277 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 80/231 (34%), Gaps = 28/231 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y ++Q + ++ EYF Q +P + + + +M +S G++ +A + Sbjct: 186 LYLVGFAAREQQQYQESLEYFGQVVERYPDSPLYGDAWMMIGEHYFSTGQWPEARAAYAN 245 Query: 120 YITQYPESKNVDYVYYLVGMSY------------AQMIRDVPYDQRATKLMLQYMSRIVE 167 + + P+S D + + + + D+ + + +Q R Sbjct: 246 VLAR-PDSPTYDLALFKTAWADWKLGDPDLAARRFKQVLDLAVEAETSGSAVQRRRRAQL 304 Query: 168 RYTNSPY-----VKGARFYVTVGRNQLA-----AKE----VEIGRYYLKRGEYVAAIPRF 213 R Y + + LA V + Y + EY A + Sbjct: 305 RDEALEYLVVVFTEDRSISAQEVYDFLASIGGTRYSRDVLVRVADAYFGQSEYERAAQTY 364 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY-PQGYWA 263 + ++ A E +VEAYVA ++ + L+ E Y P WA Sbjct: 365 RFLIDMKPTGIEAAEYQRAVVEAYVAALQPEQVEAEMRLLVENYGPASKWA 415 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 58/188 (30%), Gaps = 22/188 (11%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + + F KA ++ + ++FP +A ++ + + + A + Q+A Sbjct: 662 GERYAEAGEFEKAASFYLRIPQEFPQHTMAAQAQMNAGVMYEKAKRPQRAGQAYLALAAS 721 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 YP+SK + G + + + + E + S A F Sbjct: 722 YPDSKEAPKAAFAAGQ-LYESVAYFDR-------AAEAYEVVAETFPRSEQSADALFNAG 773 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 + R L E AI +Q Y A E R+ Y Sbjct: 774 LLRQSLDQNE--------------RAIEHYQTYAKRYRGKADAAEVAFRIGVVYENAERY 819 Query: 244 DEAREVVS 251 D+A + Sbjct: 820 DDAADAYR 827 Score = 38.9 bits (90), Expect = 0.74, Method: Composition-based stats. Identities = 27/224 (12%), Positives = 71/224 (31%), Gaps = 29/224 (12%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF----AGVARKSLLMSAFV--Q 104 D ++ +F ++ +A + + +P + L A Sbjct: 566 PADPELVGVIFRNGEMFYDYGDYDEAIKRYGLIVTKYPDDQNAGPAGDRILESLAKAEDY 625 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY--DQRATKLMLQYM 162 + ++ + + + ++ +S+ L + + + + + + Sbjct: 626 ENIEEWARKLKTAKAFQSKEQQSR-------LDRLIVESIGKSGERYAEAGEFEKAASFY 678 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 RI + + A+ + G Y K A + + A+Y D Sbjct: 679 LRIPQEFPQHTMAAQAQ--------------MNAGVMYEKAKRPQRAGQAYLALAASYPD 724 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 ++ A +A + Y ++A D A E ++ E +P+ + Sbjct: 725 SKEAPKAAFAAGQLYESVAYFDRAAEAYEVVAETFPRSEQSADA 768 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 64/204 (31%), Gaps = 42/204 (20%) Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEY-ITQYPESKNVDYVYYLVGM--SYAQMI 145 +R L+ A + +Y++AA + I P Y + +Y + Sbjct: 336 GTRYSRDVLVRVADAYFGQSEYERAAQTY-RFLIDMKPTGIEA--AEYQRAVVEAYVAAL 392 Query: 146 RDVPYDQRATKLMLQYMSRIVERY-TNSPYVKG------ARFYVTVGRNQLAAKEVEIGR 198 + + + M +VE Y S + + + + + Sbjct: 393 Q--------PEQVEAEMRLLVENYGPASKWAEQNAKFPTRKARSERLTEAMVRN---TAK 441 Query: 199 YY-------LKRGE------YVAAIPRFQLVLANYSDAEHAEEAMARLVEA---YVALAL 242 Y KR + Y A +Q L Y EH A R + A Y L Sbjct: 442 NYHAEAQAAEKRDKKPDLALYTQAADLYQTYLTAY--TEHENAAEVRFLRAEILYFKLGK 499 Query: 243 MDEAREVVSLIQERYPQGYWARYV 266 ++EA + + ++ P G + + Sbjct: 500 LEEAGDEYLAVAQQTPVGKYHKDA 523 Score = 35.1 bits (80), Expect = 9.9, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 18/168 (10%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + + L+ F +A E + + FP + + +L + ++ S + Sbjct: 723 PDSKEAPKAAFAAGQLYESVAYFDRAAEAYEVVAETFPRSEQSADALFNAGLLRQSLDQN 782 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 ++A + Y +Y + V + +G+ Y R R ++ + Sbjct: 783 ERAIEHYQTYAKRYRGKADAAEVAFRIGVVYENAERYDD--------AADAYRRYLKGHA 834 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR--GEYVAAIPRFQLV 216 S +V ++ E+ GR LKR E+ AA+ F+ + Sbjct: 835 RS------GRHVVEAHTRVGRSELAAGR--LKRAGNEFDAALKVFRRL 874 >gi|268316245|ref|YP_003289964.1| Extracellular ligand-binding receptor [Rhodothermus marinus DSM 4252] gi|262333779|gb|ACY47576.1| Extracellular ligand-binding receptor [Rhodothermus marinus DSM 4252] Length = 476 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 53/135 (39%), Gaps = 11/135 (8%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 AL + + + + L W + + + +A+ + ++ AY F + Sbjct: 8 ALLMVWLLGLTGLGAWA-------QPAEIPRIEAAETEFVQALQAFERGDYGLAYRQFRR 60 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +P + +M+A Y G+Y +E++ +YP S+ L ++ A Sbjct: 61 VIDAYPAHRRTTAAWIMAAKALYRMGEYDHVIRWADEFVARYPTSRYRSEAERLRHLAEA 120 Query: 143 QMIRDVPYDQRATKL 157 + R Q+AT+L Sbjct: 121 ALHRR----QQATRL 131 >gi|317478355|ref|ZP_07937519.1| tetratricopeptide [Bacteroides sp. 4_1_36] gi|316905514|gb|EFV27304.1| tetratricopeptide [Bacteroides sp. 4_1_36] Length = 1014 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 33/73 (45%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +YEK +++ N +A F + +P + V+RK+ + Y Y +A Sbjct: 633 NALYEKGRSYVQSNNSPQAIAAFRELLGKYPESPVSRKAAAEIGLLYYQNDDYDRAIEAY 692 Query: 118 EEYITQYPESKNV 130 + +TQYP S+ Sbjct: 693 KHVVTQYPGSEEA 705 Score = 52.0 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 45/126 (35%), Gaps = 8/126 (6%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y+ A++ ++++S ++ + +P + A +L + QA + E Sbjct: 598 YYQLALVAGLQKDYSGKVTLLDRLAVKYPNSPYAINALYEKGRSYVQSNNSPQAIAAFRE 657 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + +YPES +G+ Y D ++ +V +Y S + A Sbjct: 658 LLGKYPESPVSRKAAAEIGLLYY-QNDDYDR-------AIEAYKHVVTQYPGSEEARLAM 709 Query: 180 FYVTVG 185 + Sbjct: 710 RDLKSI 715 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 68/226 (30%), Gaps = 50/226 (22%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-------SAFVQYSAGK--- 109 Y + ++++S A F L A G Sbjct: 524 YYNLGYIAFHQKDYSTAENRFRNF------------VQLEKGENPTALADAYNRIGDCNL 571 Query: 110 ----YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + +A + + + DY YY + + + + R+ Sbjct: 572 HVRRFDEAKQYYTKAESL--GTPAGDYSYYQLALVAGLQKDYSGK--------VTLLDRL 621 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 +Y NSPY N L K GR Y++ AI F+ +L Y ++ Sbjct: 622 AVKYPNSPYA----------INALYEK----GRSYVQSNNSPQAIAAFRELLGKYPESPV 667 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + +A A + Y D A E + +YP AR +K Sbjct: 668 SRKAAAEIGLLYYQNDDYDRAIEAYKHVVTQYPGSEEARLAMRDLK 713 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 87/309 (28%), Gaps = 68/309 (22%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 +K + + ++ L+ + S + + +Y++ +++ ++ A Sbjct: 3 HKISRILCTALCCAPLLASAQTSEKST---------SPKRLYQEGQTLFQQKAYAAAISP 53 Query: 80 FNQCSRD-------FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 R P G +++ M Y ++ L ++ +YP++ + + Sbjct: 54 LQAYVRQMNADGKPLPDTGERQEAEYMLVCAAYELRD-PKSIDLLRAFLDEYPDTPHANR 112 Query: 133 VYYLVGMSYA---------QMIRDVPYDQRATKLMLQYMSRIVERYTNS----------- 172 +Y L+ SY M D T+ R+ Y + Sbjct: 113 IYALIASSYFFEGNYDDALAMFNSARLDLLGTEERDDMTYRLATCYLKTGNVKEAAIWFE 172 Query: 173 -------PYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKRGE 205 Y +Y++ R + I YL + + Sbjct: 173 TLRSTSRKYAADCAYYISYIRYTQGRYDEALSGFLPLQDNAKYKNLVPYYIAEIYLLKKQ 232 Query: 206 YVAAIPRFQLVLANYSD---AEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGY 261 Y A Q L+ + D H E L A EA + ++ Sbjct: 233 YDKAEIVAQNALSAHPDGLSYTHTAELNRILGTAEYHFGKYHEAIKSFEQYLEHNAESAT 292 Query: 262 WARYVETLV 270 R ++ Sbjct: 293 HRRDALYML 301 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 38/271 (14%), Positives = 85/271 (31%), Gaps = 74/271 (27%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--LMSAFVQ 104 Y +S + E+ +L+ + ++ +A E + +P + AR ++ L S +V Sbjct: 662 YPESPVSRKAAAEI---GLLYYQNDDYDRAIEAYKHVVTQYPGSEEARLAMRDLKSIYVD 718 Query: 105 ------------------------------------YSAGKYQQAASLGEEYITQYPESK 128 Y G+ A Y+ YP Sbjct: 719 ANRVDEFAALAAQMPGEIRFEPSEQDSLTYIAAEKVYMKGEAAPAKESFTRYLQSYPGGA 778 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 +Y + + + +Q+ + +L++ +++E Y ++PY + A Sbjct: 779 FSLNAHYYLCV--------IGKEQKDDEAVLEHAGKLLE-YPDNPYSEEALLMHGEILFN 829 Query: 189 LAAKEVEIGRYY-LKRGEYVA----------------------AIPRFQLVLANYSDAEH 225 ++ + Y L+ A I +LA + Sbjct: 830 RQQYDLALADYKKLQAKATTAERRQLGAIGVLRCGALMHDDAEVINAATALLAEAKLSPE 889 Query: 226 AE-EAMARLVEAYVALALMDEAREVVSLIQE 255 EA+ +AY+ +A + + L+ + Sbjct: 890 LRNEALYYRAKAYLNQKADKKAMDDLQLLAK 920 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 72/214 (33%), Gaps = 19/214 (8%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLM--SAFVQYSAGKYQQAASLG 117 Y A ++L ++ + KA P + L +Y GKY +A Sbjct: 221 YYIAEIYLLKKQYDKAEIVAQNALSAHPDGLSYTHTAELNRILGTAEYHFGKYHEAIKSF 280 Query: 118 EEYITQYPESK-NVDYVYYLVGMSYAQ-----MIRDVPYDQRATKLMLQYMSRIVERYTN 171 E+Y+ ES + Y++GMSY Q + + + L + + Sbjct: 281 EQYLEHNAESATHRRDALYMLGMSYYQCGVYSQVPAILGEVTTENDALSQNAYLHMGLAY 340 Query: 172 SPYVKGARFYVTVGR----------NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + + + + AA + + + ++ F+ L + Sbjct: 341 LQLADKTKARMAFEQAAASNADPKIKEQAAYNYALCIHETSYSAFGESVTVFEKFLNEFP 400 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 ++ +AE+ LVE Y+ D A + + I Sbjct: 401 NSPYAEKVSNYLVEVYMNTRSYDAALKSIDRISH 434 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 74/236 (31%), Gaps = 40/236 (16%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115 +++ F +A YFNQ ++ + + Y + ++AA Sbjct: 447 LFQLGTQSFANTQFEQAIGYFNQSVTL---GQYNLQTKADALYWLGESYYRLNRMREAAR 503 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQM--IRDVPYDQRATKLMLQYMSRIVERYTNSP 173 EY++ ++ + + ++Y + I D + + ++ + +P Sbjct: 504 NFNEYLSL-TRQRDTE----MFALAYYNLGYIAFHQKDYSTAENRFRNFVQLEKG--ENP 556 Query: 174 YV-KGARFYVTVGRNQLAAKEVEIGRYYLK----------------------RGEYVAAI 210 A + + + E +YY K + +Y + Sbjct: 557 TALADAYNRIGDCNLHVRRFD-EAKQYYTKAESLGTPAGDYSYYQLALVAGLQKDYSGKV 615 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 + Y ++ +A A+ +YV +A + +YP+ +R Sbjct: 616 TLLDRLAVKYPNSPYAINALYEKGRSYVQSNNSPQAIAAFRELLGKYPESPVSRKA 671 >gi|160891540|ref|ZP_02072543.1| hypothetical protein BACUNI_03992 [Bacteroides uniformis ATCC 8492] gi|156858947|gb|EDO52378.1| hypothetical protein BACUNI_03992 [Bacteroides uniformis ATCC 8492] Length = 1014 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 33/73 (45%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +YEK +++ N +A F + +P + V+RK+ + Y Y +A Sbjct: 633 NALYEKGRSYVQSNNSPQAIAAFRELLGKYPESPVSRKAAAEIGLLYYQNDDYDRAIEAY 692 Query: 118 EEYITQYPESKNV 130 + +TQYP S+ Sbjct: 693 KHVVTQYPGSEEA 705 Score = 52.0 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 45/126 (35%), Gaps = 8/126 (6%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y+ A++ ++++S ++ + +P + A +L + QA + E Sbjct: 598 YYQLALVAGLQKDYSGKVTLLDRLAVKYPNSPYAINALYEKGRSYVQSNNSPQAIAAFRE 657 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + +YPES +G+ Y D ++ +V +Y S + A Sbjct: 658 LLGKYPESPVSRKAAAEIGLLYY-QNDDYDR-------AIEAYKHVVTQYPGSEEARLAM 709 Query: 180 FYVTVG 185 + Sbjct: 710 RDLKSI 715 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 68/226 (30%), Gaps = 50/226 (22%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-------SAFVQYSAGK--- 109 Y + ++++S A F L A G Sbjct: 524 YYNLGYIAFHQKDYSTAENRFRNF------------VQLEKGENPTALADAYNRIGDCNL 571 Query: 110 ----YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + +A + + + DY YY + + + + R+ Sbjct: 572 HVRRFDEAKQYYTKAESL--GTPAGDYSYYQLALVAGLQKDYSGK--------VTLLDRL 621 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 +Y NSPY N L K GR Y++ AI F+ +L Y ++ Sbjct: 622 AVKYPNSPYA----------INALYEK----GRSYVQSNNSPQAIAAFRELLGKYPESPV 667 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + +A A + Y D A E + +YP AR +K Sbjct: 668 SRKAAAEIGLLYYQNDDYDRAIEAYKHVVTQYPGSEEARLAMRDLK 713 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 38/271 (14%), Positives = 85/271 (31%), Gaps = 74/271 (27%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--LMSAFVQ 104 Y +S + E+ +L+ + ++ +A E + +P + AR ++ L S +V Sbjct: 662 YPESPVSRKAAAEI---GLLYYQNDDYDRAIEAYKHVVTQYPGSEEARLAMRDLKSIYVD 718 Query: 105 ------------------------------------YSAGKYQQAASLGEEYITQYPESK 128 Y G+ A Y+ YP Sbjct: 719 ANRVDEFAALAAQMPGEIRFEPSEQDSLTYIAAEKVYMKGEAAPAKESFTRYLQSYPGGA 778 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 +Y + + + +Q+ + +L++ +++E Y ++PY + A Sbjct: 779 FSLNAHYYLCV--------IGKEQKDDEAVLEHAGKLLE-YPDNPYSEEALLMHGEILFN 829 Query: 189 LAAKEVEIGRYY-LKRGEYVA----------------------AIPRFQLVLANYSDAEH 225 ++ + Y L+ A I +LA + Sbjct: 830 RQQYDLALADYKKLQAKATTAERRQLGAIGVLRCGALMHDDAEVINAATALLAEAKLSPE 889 Query: 226 AE-EAMARLVEAYVALALMDEAREVVSLIQE 255 EA+ +AY+ +A + + L+ + Sbjct: 890 LRNEALYYRAKAYLNQKADKKAMDDLQLLAK 920 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 72/214 (33%), Gaps = 19/214 (8%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLM--SAFVQYSAGKYQQAASLG 117 Y A ++L ++ + KA P + L +Y GKY +A Sbjct: 221 YYIAEIYLLKKQYDKAEIVAQNALSAHPDGLSYTHTAELNRILGTAEYHFGKYHEAIKSF 280 Query: 118 EEYITQYPESK-NVDYVYYLVGMSYAQ-----MIRDVPYDQRATKLMLQYMSRIVERYTN 171 E+Y+ ES + Y++GMSY Q + + + L + + Sbjct: 281 EQYLEHNAESATHRRDALYMLGMSYYQCGVYSQVPAILGEVTTENDALSQNAYLHMGLAY 340 Query: 172 SPYVKGARFYVTVGR----------NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + + + + AA + + + ++ F+ L + Sbjct: 341 LQLADKTKARMAFEQAAASNADPKIKEQAAYNYALCIHETSYSAFGESVTVFEKFLNEFP 400 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 ++ +AE+ LVE Y+ D A + + I Sbjct: 401 NSPYAEKVSNYLVEVYMNTRSYDAALKSIDRISH 434 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 74/236 (31%), Gaps = 40/236 (16%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115 +++ F +A YFNQ ++ + + Y + ++AA Sbjct: 447 LFQLGTQSFANTQFEQAIGYFNQSVTL---GQYNLQTKADALYWLGESYYRLNRMREAAR 503 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQM--IRDVPYDQRATKLMLQYMSRIVERYTNSP 173 EY++ ++ + + ++Y + I D + + ++ + +P Sbjct: 504 NFNEYLSL-TRQRDTE----MFALAYYNLGYIAFHQKDYSTAENRFRNFVQLEKG--ENP 556 Query: 174 YV-KGARFYVTVGRNQLAAKEVEIGRYYLK----------------------RGEYVAAI 210 A + + + E +YY K + +Y + Sbjct: 557 TALADAYNRIGDCNLHVRRFD-EAKQYYTKAESLGTPAGDYSYYQLALVAGLQKDYSGKV 615 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 + Y ++ +A A+ +YV +A + +YP+ +R Sbjct: 616 TLLDRLAVKYPNSPYAINALYEKGRSYVQSNNSPQAIAAFRELLGKYPESPVSRKA 671 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 91/309 (29%), Gaps = 51/309 (16%) Query: 1 MSAVLGRAICIFEAWA-----------YQLYKFALTIF----FSIAVCFLVGWERQSSRD 45 +S +L A+C A +LYK T+F ++ A+ L + Q + D Sbjct: 5 ISRILCTALCCAPLLASAQTSEKSTSPKRLYKEGQTLFQQKAYAAAISPLQAYVHQMNAD 64 Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 T R + E Y + ++ + ++P A + + A + Sbjct: 65 GKPLPATGERQEAE-YMLVCAAYELRDPKS-IDLLRAFLDEYPDTPHANRIYALIASSYF 122 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 G Y A ++ ++ D + Y + Y + K + + Sbjct: 123 FEGNYDDALAMFNSARLDLLGTEERDDMTYRLATCYLKT--------GNVKEAAIWFETL 174 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLKRGE 205 R T+ Y +Y++ R + I YL + + Sbjct: 175 --RSTSRKYAADCAYYISYIRYTQGRYDEALSGFLPLQDNAKYKNLVPYYIAEIYLLKKQ 232 Query: 206 YVAAIPRFQLVLANYSD---AEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGY 261 Y A Q L+ + D H E L A EA + ++ Sbjct: 233 YDKAEIVAQNALSAHPDGLSYTHTAELNRILGTAEYHFGKYHEAIKSFEQYLEHNAESAT 292 Query: 262 WARYVETLV 270 R ++ Sbjct: 293 HRRDALYML 301 >gi|77460621|ref|YP_350128.1| hypothetical protein Pfl01_4400 [Pseudomonas fluorescens Pf0-1] gi|77384624|gb|ABA76137.1| putative exported protein [Pseudomonas fluorescens Pf0-1] Length = 279 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 8/131 (6%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ Y+ A +K ++F KA + F R +P + A + V + G Sbjct: 152 EPADPAKEKLYYDAAFDLIKAKDFDKASQAFAAFLRKYPNSQYAGNAQYWLGEVNLAKGD 211 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + YP+ V Y + DV T + + ++V +Y Sbjct: 212 LQGAGQAFAKVSQLYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 263 Query: 170 TNSPYVKGARF 180 + + A+ Sbjct: 264 PGTSAAQLAQR 274 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 167 FDLIKAKDFD-----KASQAFAAFLRKYPNSQYAGNAQYWLGEVN--LAKGDLQ------ 213 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 214 ------GAGQAFAKVSQLYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 267 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 268 AAQLAQRDLQ 277 >gi|148546496|ref|YP_001266598.1| Tol-Pal system, YbgF [Pseudomonas putida F1] gi|148510554|gb|ABQ77414.1| Tol-Pal system, YbgF [Pseudomonas putida F1] Length = 268 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 52/136 (38%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ Y+ A +K+++F KA + F+ R +P + A + V + G Sbjct: 141 QPGDPAKEKLYYDAAFDLIKQKDFDKASQAFSAFLRKYPNSQYAGNAQYWLGEVNLAKGD 200 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A+ + +YP+ V Y + DV T + + ++V +Y Sbjct: 201 LQGASQAFAQVSQKYPKHSKVPDSLYKLA--------DVERRMGHTDKVKGILQQVVTQY 252 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 253 PGTSAAQLAQRDLQKL 268 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 45/120 (37%), Gaps = 14/120 (11%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q+ Q S + +Y NS Y A++++ LA +++ A Sbjct: 161 QKDFDKASQAFSAFLRKYPNSQYAGNAQYWLGEVN--LAKGDLQ------------GASQ 206 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 F V Y +++ +L + + D+ + ++ + +YP A+ + ++ Sbjct: 207 AFAQVSQKYPKHSKVPDSLYKLADVERRMGHTDKVKGILQQVVTQYPGTSAAQLAQRDLQ 266 >gi|225872179|ref|YP_002753634.1| transporter auxiliary protein, TonB-ExbB-ExbD/TolA-TolQ-TolR (TonB) family [Acidobacterium capsulatum ATCC 51196] gi|225794587|gb|ACO34677.1| transporter auxiliary protein, TonB-ExbB-ExbD/TolA-TolQ-TolR (TonB) family [Acidobacterium capsulatum ATCC 51196] Length = 314 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 41/141 (29%), Gaps = 22/141 (15%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 +++Y+ A+ + + A F +D+P ++ + Y KY Sbjct: 175 PAFPPIKQLYQVALSDYEGGRYKLAASEFGDVVKDYPLDELSGSAQFYIGESNYRLHKYH 234 Query: 112 QAASLGEEYITQYPESKNVD-------YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 A E + + + Y ++ + V + Sbjct: 235 DAIKAYENVLQNFAGNSKAPASRLHKAYAE----LALGERESGV-----------HDLKA 279 Query: 165 IVERYTNSPYVKGARFYVTVG 185 ++ RY +P AR + Sbjct: 280 LIARYPQTPEASQARVRLHGL 300 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 46/130 (35%), Gaps = 26/130 (20%) Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Y V +S + R KL +V+ Y A+ Sbjct: 183 LYQVALSDYEGGR--------YKLAASEFGDVVKDYPLDELSGSAQ-------------- 220 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV--VS 251 IG + +Y AI ++ VL N++ A + RL +AY LAL + V + Sbjct: 221 FYIGESNYRLHKYHDAIKAYENVLQNFAGNSKAPAS--RLHKAYAELALGERESGVHDLK 278 Query: 252 LIQERYPQGY 261 + RYPQ Sbjct: 279 ALIARYPQTP 288 Score = 38.6 bits (89), Expect = 0.92, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 30/89 (33%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 DV D D + + + A + + ++F A S L A+ + Sbjct: 205 DVVKDYPLDELSGSAQFYIGESNYRLHKYHDAIKAYENVLQNFAGNSKAPASRLHKAYAE 264 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYV 133 + G+ + + I +YP++ Sbjct: 265 LALGERESGVHDLKALIARYPQTPEASQA 293 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 50/145 (34%), Gaps = 24/145 (16%) Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 F + + + + Y G+Y+ AAS + + YP + + +G S ++ + Sbjct: 177 FPPIKQLYQVALSD--YEGGRYKLAASEFGDVVKDYPLDELSGSAQFYIGESNYRLHK-- 232 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 ++ +++ + + +R + L +E + Sbjct: 233 ------YHDAIKAYENVLQNFAGNSKAPASRLHKAYAELALGERE--------------S 272 Query: 209 AIPRFQLVLANYSDAEHAEEAMARL 233 + + ++A Y A +A RL Sbjct: 273 GVHDLKALIARYPQTPEASQARVRL 297 >gi|87307368|ref|ZP_01089513.1| hypothetical protein DSM3645_17635 [Blastopirellula marina DSM 3645] gi|87290108|gb|EAQ81997.1| hypothetical protein DSM3645_17635 [Blastopirellula marina DSM 3645] Length = 1065 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 74/230 (32%), Gaps = 38/230 (16%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY---SAGKYQQAASLGE 118 AV LK ++ A F ++ P + + +LL Y +G + S + Sbjct: 75 NLAVCQLKLDKYADAAGNFYAILKNNPKSELREDALLNLGSTYYSWAKSGSPKMFDSAAK 134 Query: 119 EYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY- 174 + Y P+ KN D Y G S+ DQ+ L +VE++T SPY Sbjct: 135 TFEQLYKEYPQGKNADQALYFAGESFYLS------DQKD--RSLGPYKALVEQFTQSPYR 186 Query: 175 -------------------VKGARFYVTVG---RNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + A + L + ++ A Sbjct: 187 ADGAYAWGVTLEELNKPTEAADVYSKFLAAFPDHDLAAEVRMRQAETVLNQNDFAKAEQM 246 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 V A+ + A+ RL A + + +A + + I YP+ + Sbjct: 247 LTTVTAD-PQFPLIDHALYRLAFARLKQEKLADAGAIYAQIAADYPKSKY 295 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 64/200 (32%), Gaps = 16/200 (8%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y AV F K + + A E +++ + +A K+ A Q KY AA Sbjct: 36 IYSDAVAFQKAEEYGLAAEEWSKFLKRHGDDPLAEKARNNLAVCQLKLDKYADAAGNFYA 95 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P+S+ + +G +Y + + + ++ + Y A Sbjct: 96 ILKNNPKSELREDALLNLGSTYYSWAKSGS--PKMFDSAAKTFEQLYKEYPQGKNADQAL 153 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 G + + ++ ++ ++ ++ + + + Sbjct: 154 --------------YFAGESFYLSDQKDRSLGPYKALVEQFTQSPYRADGAYAWGVTLEE 199 Query: 240 LALMDEAREVVSLIQERYPQ 259 L EA +V S +P Sbjct: 200 LNKPTEAADVYSKFLAAFPD 219 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 80/224 (35%), Gaps = 55/224 (24%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D ++ Y+ ++++++ A + F + +P +A + M Y ++ Sbjct: 810 DDVGEKSAYKLGWAQYQQRDYAAASDAFAVQTSKYPNGPLAADASFMRGECLYKKDQFAD 869 Query: 113 AASLG-----EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY---DQRATK-----LML 159 A S + +S + +RD+ Q A + + Sbjct: 870 ALSAYGQVKSDR-------------------LS-SNDMRDLWRLHAGQSAAQLKKWDESI 909 Query: 160 QYMSRIVERYTNSPYVKGARFYV-----------TVGRNQLAAKEVE-----------IG 197 ++M+ ++ + +SP A++ + + LAA ++ +G Sbjct: 910 RWMNELLTQSPDSPVAAEAQYELGWANYNQKKTDEAIQRFLAAADLSPGKTGARARFMLG 969 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 Y ++ +Y AA +F+ V+ + A+ +E +A L Sbjct: 970 ELYFEKKDYEAAEGQFKRVVLGFGGAKSLDEVKPWQAKAAYELG 1013 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 39/97 (40%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + V + +Y +++Q +A + F+Q +A +SL A Sbjct: 616 QTVVDKFASSSLAPHALYGLGWSHIQQQQGKEARDAFSQLLTKHNDHQLAPQSLHARAVA 675 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + + + AAS + Y+ + P++ + YL G+ Sbjct: 676 RRLSNDFAGAASDVDAYLKKSPQAADKADALYLKGLC 712 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 31/85 (36%), Gaps = 6/85 (7%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + +Y++ ++ + Q P A ++L AF + A Sbjct: 373 IDQADALYDQPQRR------GESVRLYQQIVTQHPKDPQAPQALYNGAFAALETQDHAAA 426 Query: 114 ASLGEEYITQYPESKNVDYVYYLVG 138 A L + ++ Q+P+ + + Y+ Sbjct: 427 ARLAKTFVNQFPQHELLLDAKYVAA 451 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 44/110 (40%), Gaps = 14/110 (12%) Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 ++ ++Q + + ++ ++ NSP A + + G YY Sbjct: 560 LLSRAQHEQGDDTAAIATVRKMQKQLPNSPLADHAAYRL--------------GEYYYAA 605 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 G++ A +Q V+ ++ + A A+ L +++ EAR+ S + Sbjct: 606 GDFAKAAAEYQTVVDKFASSSLAPHALYGLGWSHIQQQQGKEARDAFSQL 655 Score = 35.1 bits (80), Expect = 9.7, Method: Composition-based stats. Identities = 19/171 (11%), Positives = 53/171 (30%), Gaps = 28/171 (16%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A A +Y AA +++ ++ + + + + ++ + Sbjct: 40 AVAFQKAEEYGLAAEEWSKFLKRHGDDPLAEKARNNLAVCQLKLDKYAD--------AAG 91 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK------RGEYVAAIPRFQ 214 I++ S + A + +G Y + +A F+ Sbjct: 92 NFYAILKNNPKSELREDAL--------------LNLGSTYYSWAKSGSPKMFDSAAKTFE 137 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 + Y ++A++A+ E++ D + + E++ Q + Sbjct: 138 QLYKEYPQGKNADQALYFAGESFYLSDQKDRSLGPYKALVEQFTQSPYRAD 188 >gi|312115988|ref|YP_004013584.1| tol-pal system protein YbgF [Rhodomicrobium vannielii ATCC 17100] gi|311221117|gb|ADP72485.1| tol-pal system protein YbgF [Rhodomicrobium vannielii ATCC 17100] Length = 308 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 14/134 (10%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 D ++ R ++E+ L + +S A YF Q +P VA + Sbjct: 171 DATPAALPASGGARALFEQGTGALNRREYSAAETYFQQVVDQYPSDPVAGPAYYWLGETA 230 Query: 105 YSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + +G+Y + + ++ YP ++ + +S ++ Sbjct: 231 FVSGEY---RTAADRFLKTFTAYPNTERAPEALLKLAISLRRLGEKA--------AACDS 279 Query: 162 MSRIVERYTNSPYV 175 + + RY P Sbjct: 280 FAELQRRYPQGPKA 293 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 14/110 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 +R Y ++V++Y + P A +++ G GEY A Sbjct: 196 RREYSAAETYFQQVVDQYPSDPVAGPAYYWL--------------GETAFVSGEYRTAAD 241 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 RF Y + E A EA+ +L + L A + + +Q RYPQG Sbjct: 242 RFLKTFTAYPNTERAPEALLKLAISLRRLGEKAAACDSFAELQRRYPQGP 291 >gi|304312646|ref|YP_003812244.1| hypothetical protein HDN1F_30200 [gamma proteobacterium HdN1] gi|301798379|emb|CBL46603.1| Hypothetical protein HDN1F_30200 [gamma proteobacterium HdN1] Length = 1047 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 60/169 (35%), Gaps = 24/169 (14%) Query: 65 VLFLKEQ-NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 L+ N+++A + + R+ P + + A + ++A + + + Sbjct: 144 KESLESGANYARAIQLYEDQIRNAPEGTDLSDTWYLLAKAYDLNAEPEKALAALDTMAER 203 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 YP S +D V + G Y M L ++++ Y + A + Sbjct: 204 YPNSPLMDEVQFRRGEQYFVM--------GNNDKALAAYKQVLKAGPEGKYYENALYKYG 255 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY-SDAEHAEEAMA 231 ++GEY AA+ F +L Y +AE E+ MA Sbjct: 256 WSL--------------YRQGEYEAALTPFITLLDRYLPNAETVEQQMA 290 Score = 42.8 bits (100), Expect = 0.057, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 36/79 (45%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 R +Y++A + E ++A + + + P + V K+ +A + G Y+Q Sbjct: 695 QERRATAIYKQAEMLEHEGMKAEAARQYQKVASVEPNSEVRIKADYDAANLLMETGDYEQ 754 Query: 113 AASLGEEYITQYPESKNVD 131 A + EE+ ++P+ + Sbjct: 755 AVRVLEEFQRKFPKHELAA 773 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 26/71 (36%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A L ++ ++ +A + R FP +A + G AA E+ Sbjct: 740 YDAANLLMETGDYEQAVRVLEEFQRKFPKHELAATVPAKLSVAYQKLGNIDGAAHALEQV 799 Query: 121 ITQYPESKNVD 131 T ++ + Sbjct: 800 ATLNADNPELA 810 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 41/131 (31%), Gaps = 9/131 (6%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 D ++ Y A + KA + + +P + + + Sbjct: 161 EDQIRNAPEGTDLSDTWYLLAKAYDLNAEPEKALAALDTMAERYPNSPLMDEVQFRRGEQ 220 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + G +A + ++ + PE K + Y G S + Q + L Sbjct: 221 YFVMGNNDKALAAYKQVLKAGPEGKYYENALYKYGWSLYR--------QGEYEAALTPFI 272 Query: 164 RIVERY-TNSP 173 +++RY N+ Sbjct: 273 TLLDRYLPNAE 283 >gi|296127379|ref|YP_003634631.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] gi|296019195|gb|ADG72432.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] Length = 346 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 9/126 (7%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A E N+ K+ Y+ + + FP A ++L A Y+ Y +A + Sbjct: 226 AHKTFVEGNYVKSRMYYTKIAELFPRTEYAEEALFRIAQSYYNEKNYNRAIDYYNR-VRL 284 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 +G+SY ++ R + + V Y +P AR Y+ Sbjct: 285 NNVYTLDAEALLYIGLSYFKVGRYSD--------SYKALDNFVSEYPANPNASRAREYMQ 336 Query: 184 VGRNQL 189 + L Sbjct: 337 ALQETL 342 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 40/90 (44%), Gaps = 2/90 (2%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + ++ A + E+N+++A +Y+N+ + + A +LL + G+Y Sbjct: 250 PRTEYAEEALFRIAQSYYNEKNYNRAIDYYNRVRLNNVYTLDAE-ALLYIGLSYFKVGRY 308 Query: 111 QQAASLGEEYITQYPESKNVDYV-YYLVGM 139 + + ++++YP + N Y+ + Sbjct: 309 SDSYKALDNFVSEYPANPNASRAREYMQAL 338 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 70/213 (32%), Gaps = 34/213 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ + +A YF + ++L A V ++ +Y +A E+++ Sbjct: 153 GYQLFLQKKYGEALSYFLRAD--------GELAVLGRARVYFNMNEYDRAFETYEDFLKY 204 Query: 124 YPESKNVDYVY--YLV---GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 S D V YL+ M++ + Y ++I E + + Y + A Sbjct: 205 NKTSIYYDEVVRTYLIQVPAMAHKTFVEG------NYVKSRMYYTKIAELFPRTEYAEEA 258 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 F I + Y Y AI + V N A EA+ + +Y Sbjct: 259 LFR--------------IAQSYYNEKNYNRAIDYYNRVRLNNVYTLDA-EALLYIGLSYF 303 Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + ++ + + YP A ++ Sbjct: 304 KVGRYSDSYKALDNFVSEYPANPNASRAREYMQ 336 >gi|330959273|gb|EGH59533.1| tol-pal system protein YbgF [Pseudomonas syringae pv. maculicola str. ES4326] Length = 207 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 80 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 139 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 140 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 191 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 192 PGTSAAQLAQRDLQRL 207 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 44/119 (36%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + Q + + +Y NS Y A++++ LA +++ A Sbjct: 101 KDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------------GAGQA 146 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 F V Y +++ +L + L D+ + ++ + +YP A+ + ++ Sbjct: 147 FAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 205 >gi|254412800|ref|ZP_05026573.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196180535|gb|EDX75526.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 595 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 66/206 (32%), Gaps = 35/206 (16%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 D +E +E+ V LK N A E F++ + P + + G +Q Sbjct: 200 PDRIKAQEFFEQGVEHLKSGNVQGAIEAFDESIQLNPNNPL---AYGNRGIAYDDLGAHQ 256 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + I P + + YY G++ D + ++ + +++R +N Sbjct: 257 AAVEDYTKLIELAPSNTD---AYYQRGLARY--------DLEDWQGAVEDFTELIQRKSN 305 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 + A I Y + +Y AAI + A A Sbjct: 306 ---------------DDQAYYHRGIANY--QLNQYKAAIADLDQAIQLNPQNAQAYAARG 348 Query: 232 RLVEAYVALALMDEA-REVVSLIQER 256 ++ A + EA + I+ Sbjct: 349 LVLSA---MGNQQEAMADYTQAIEYN 371 >gi|224025229|ref|ZP_03643595.1| hypothetical protein BACCOPRO_01963 [Bacteroides coprophilus DSM 18228] gi|224018465|gb|EEF76463.1| hypothetical protein BACCOPRO_01963 [Bacteroides coprophilus DSM 18228] Length = 1004 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 71/216 (32%), Gaps = 57/216 (26%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + +YE+ F+ ++ S A ++ + +P + ++RK+ + Y +Y Sbjct: 613 PSSQYLDDALYEQGRAFVLMEDHSNAINRYSLLVQRYPESPLSRKAANEIGLLYYQTDQY 672 Query: 111 QQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRD----- 147 +A + ++ IT YP S+ DY M++A I Sbjct: 673 DKAIAAYKKVITAYPGSEEARLAQRDLKSIYIDLNKVDDY------MAFASQIPGGANFD 726 Query: 148 -VPYD------------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 D + R ++ + + A +Y+ V Sbjct: 727 VNERDSLTYVAAERVYMRGEIAEAKNSFVRYLQSFPQGAFSVNASYYLGVIA-------- 778 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 + +Y +A VL Y D++ + EAM Sbjct: 779 ------YNQQDYASASSWLDKVLE-YPDSKFSTEAM 807 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 68/191 (35%), Gaps = 28/191 (14%) Query: 70 EQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 + F +A + Q P F + L AFV+ Y + +T YP S+ Sbjct: 560 ARRFDEARSLYAQAVAYDPSFGDYS---LFQEAFVKGLQRDYAGKIGTLNQLLTAYPSSQ 616 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 +D Y G ++ M + S +V+RY SP + A Sbjct: 617 YLDDALYEQGRAFVLMEDHSN--------AINRYSLLVQRYPESPLSRKAAN-------- 660 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 EIG Y + +Y AI ++ V+ Y +E A A L Y+ L +D+ Sbjct: 661 ------EIGLLYYQTDQYDKAIAAYKKVITAYPGSEEARLAQRDLKSIYIDLNKVDDYMA 714 Query: 249 VVSLI--QERY 257 S I + Sbjct: 715 FASQIPGGANF 725 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 76/224 (33%), Gaps = 46/224 (20%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQ----CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 +Y K++ ++KA +F + + VA + + A ++ +A S Sbjct: 511 LYNLGYCAFKQKQYNKALNWFERCVPLVASR--ERTVAADASNRIGDCYFYARRFDEARS 568 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ--------YMSRIVE 167 Y ++Y D Q A LQ +++++ Sbjct: 569 ------------------LYAQAVAYDPSFGDYSLFQEAFVKGLQRDYAGKIGTLNQLLT 610 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y +S Y+ A E GR ++ ++ AI R+ L++ Y ++ + Sbjct: 611 AYPSSQYLDDAL--------------YEQGRAFVLMEDHSNAINRYSLLVQRYPESPLSR 656 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 +A + Y D+A + YP AR + +K Sbjct: 657 KAANEIGLLYYQTDQYDKAIAAYKKVITAYPGSEEARLAQRDLK 700 Score = 42.8 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 58/152 (38%), Gaps = 25/152 (16%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMS 163 + Y A + Y+ Q E+ +D Y++ + ++ + D ++ +S Sbjct: 42 FLRQDYAAARQTLDRYVRQNGETDLLDEAAYMLACTSYELKMPDC----------IEALS 91 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 +E Y S Y + I + +G+Y+ +I F+ + Sbjct: 92 AYLEAYPESRYAN----RMQSL----------IASAWFFKGKYLESIATFKGCDIDMLSE 137 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 E +E RL AY+ + ++EA S+++ Sbjct: 138 EERDECTMRLGTAYMKIGNLEEAGIWFSVLKA 169 Score = 42.0 bits (98), Expect = 0.083, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 59/201 (29%), Gaps = 54/201 (26%) Query: 45 DVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR--KSLLMSA 101 D +L S + E++ +++ A + + + R K++ Sbjct: 234 DTWLASYEGQEHASEMHRISGEAAYGLNDYTGAVKQLE----QYRQSTENRDRKAMYKLG 289 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDVP 149 Y+ G Y QAA+ E P+ Y +G++Y + + Sbjct: 290 MSYYNMGVYSQAAACLGE--ATGPKDALTQNAYLHMGLAYLQLKERNQARMAFEQASTMD 347 Query: 150 YDQRATKLML-------------------QYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 +D+ + L R + Y NSPY Y+ Sbjct: 348 FDRSIREQALYNYALCIHETSYSPFAESVTVFERFLNEYPNSPYTDKVNDYLIEV----- 402 Query: 191 AKEVEIGRYYLKRGEYVAAIP 211 Y+ Y+AA+ Sbjct: 403 ---------YMNTKSYLAALK 414 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 79/239 (33%), Gaps = 42/239 (17%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAAS 115 ++ + F A EYF+Q + +++ + + +Y KY+ AA+ Sbjct: 434 LFRLGTQAFAQAAFENAIEYFSQSLQL---GQYNQQTKADAYYWRGESKYRMEKYEAAAT 490 Query: 116 LGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 +Y+ S+ Y +G + Q+ L + R V S Sbjct: 491 DLRQYLEFATNKNSQEYGLALYNLGYCAFK--------QKQYNKALNWFERCVPL-VASR 541 Query: 174 Y---VKGARFYV----------TVGRNQLAA---KEVEIGRYYLKRGEYVAAIPR----- 212 A + R+ A + G Y L + +V + R Sbjct: 542 ERTVAADASNRIGDCYFYARRFDEARSLYAQAVAYDPSFGDYSLFQEAFVKGLQRDYAGK 601 Query: 213 ---FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 +L Y +++ ++A+ A+V + A SL+ +RYP+ +R Sbjct: 602 IGTLNQLLTAYPSSQYLDDALYEQGRAFVLMEDHSNAINRYSLLVQRYPESPLSRKAAN 660 >gi|107100430|ref|ZP_01364348.1| hypothetical protein PaerPA_01001455 [Pseudomonas aeruginosa PACS2] gi|296390667|ref|ZP_06880142.1| tol-pal system protein YbgF [Pseudomonas aeruginosa PAb1] gi|313105861|ref|ZP_07792124.1| hypothetical protein PA39016_000110158 [Pseudomonas aeruginosa 39016] gi|310878626|gb|EFQ37220.1| hypothetical protein PA39016_000110158 [Pseudomonas aeruginosa 39016] Length = 213 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 48/137 (35%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ Y+ A +K ++F KA + FN R +P + + + V + G Sbjct: 85 EPGDPAKEKLYYDAAFDLIKSKDFDKASQAFNAFLRKYPNSQYSGNAQYWLGEVNLAKGD 144 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A YP S+ V Y + DV + +++ +Y Sbjct: 145 LQGAGQAFARVSQSYPSSQKVPDSLYKLA--------DVERRLGNNDKAKGILQQVISQY 196 Query: 170 TNSPYVKGARFYVTVGR 186 + + A+ + R Sbjct: 197 PGTSAAQLAQRDLKNLR 213 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 52/130 (40%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 100 FDLIKSKDFD-----KASQAFNAFLRKYPNSQYSGNAQYWLGEVN--LAKGDLQ------ 146 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V +Y ++ +++ +L + L D+A+ ++ + +YP Sbjct: 147 ------GAGQAFARVSQSYPSSQKVPDSLYKLADVERRLGNNDKAKGILQQVISQYPGTS 200 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 201 AAQLAQRDLK 210 >gi|289650950|ref|ZP_06482293.1| tol-pal system protein YbgF [Pseudomonas syringae pv. aesculi str. 2250] Length = 208 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 8/131 (6%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ YE A +K ++F KA + F R +P + A + V + G Sbjct: 81 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + QYP+ V Y + DV T + + ++V +Y Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 192 Query: 170 TNSPYVKGARF 180 + + A+ Sbjct: 193 PGTSAAQLAQR 203 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 96 FDLIKAKDFD-----KASQAFTAFLRKYPNSSYAGNAQYWLGEVN--LAKGDLQ------ 142 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 143 ------GAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 196 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 197 AAQLAQRDLQ 206 >gi|118581443|ref|YP_902693.1| TPR domain-containing protein [Pelobacter propionicus DSM 2379] gi|118504153|gb|ABL00636.1| TPR domain protein [Pelobacter propionicus DSM 2379] Length = 272 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 45/141 (31%), Gaps = 22/141 (15%) Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 YL G+ + + + + + V AR++ Sbjct: 151 ADAIYLKGLEAFKAGNMP--------AARDFFATFIAEHPKHELVGNARYWTAEAL---- 198 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 Y AAI FQ V+ N+ AM + A+ A+ + AR V+ Sbjct: 199 ----------YAEKNYEAAIVSFQDVIKNHPKLSKIPAAMLKQGRAFKAIKDPNSARYVL 248 Query: 251 SLIQERYPQGYWARYVETLVK 271 + YP+ A+ L+K Sbjct: 249 KKLIATYPKSEEAKRAGELLK 269 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 51/153 (33%), Gaps = 13/153 (8%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 LVG +S + D +Y K + K N A ++F + P + Sbjct: 133 GLVGKGAESEKFKDATPPADA-----IYLKGLEAFKAGNMPAARDFFATFIAEHPKHELV 187 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 + +A Y+ Y+ A ++ I +P+ + G + + I+D Sbjct: 188 GNARYWTAEALYAEKNYEAAIVSFQDVIKNHPKLSKIPAAMLKQGRA-FKAIKDPN---- 242 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + +++ Y S K A + + Sbjct: 243 ---SARYVLKKLIATYPKSEEAKRAGELLKEIK 272 >gi|296109346|ref|YP_003616295.1| TPR repeat-containing protein [Methanocaldococcus infernus ME] gi|295434160|gb|ADG13331.1| TPR repeat-containing protein [Methanocaldococcus infernus ME] Length = 534 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 49/130 (37%), Gaps = 18/130 (13%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 R+ YEK + + E + KA E F++ + P + A Y +Y++A Sbjct: 4 RKYYEKGLKYYNEGRYEKAIECFDKAIKLDPNNP---AAWYYKADSLYKLERYEKAIECF 60 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP---- 173 ++ I P + +Y S ++ R + ++ + ++ N+P Sbjct: 61 DKAIKLDPNNPA---AWYYKADSLYKLER--------YEKAIECFDKAIKLDPNNPAAWY 109 Query: 174 YVKGARFYVT 183 Y + + + Sbjct: 110 YKADSLYKLE 119 >gi|298491818|ref|YP_003721995.1| TPR repeat-containing protein ['Nostoc azollae' 0708] gi|298233736|gb|ADI64872.1| TPR repeat-containing protein ['Nostoc azollae' 0708] Length = 731 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 81/240 (33%), Gaps = 45/240 (18%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKY 110 TD + Y++ +++++ +A E F Q + F+ + +Y+ Y Sbjct: 454 TDSLTFIDYYDRGNEAYQKRDYEQAIENFTQGIKKKSTFSKF----YINRGNARYNLNDY 509 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + A + + + P+ G +Y + ++ + + + + Sbjct: 510 EGALADYNQALKINPQEVK---ALVNRGNAYYMLADYSSDPEQEYQKAINNFNTAIHI-- 564 Query: 171 NSPYVKGARFYVTVGRNQLA------AKEV--EIGRY-------------YLKRG--EYV 207 + A + R+Q+A E I + Y +RG Y Sbjct: 565 -NVRDTEAYIRRGIVRSQMAKYSSNYQHEYQKSIADFTEAIKLNTSKAEAYFQRGLARYQ 623 Query: 208 AA------IPRFQLVLANYSDAEHAEEAMARLVEAYVALAL--MDEAREVVSLIQERYPQ 259 A ++ + +++ A + R+ + Y+ + + A+ + +Q+ + Q Sbjct: 624 FAQYSSNYAREYKQAIVDFTQAININ---PRMAKVYLKRGMVHYELAQYGENTVQQNHAQ 680 >gi|163848374|ref|YP_001636418.1| hypothetical protein Caur_2828 [Chloroflexus aurantiacus J-10-fl] gi|222526297|ref|YP_002570768.1| tetratricopeptide repeat-containing protein [Chloroflexus sp. Y-400-fl] gi|163669663|gb|ABY36029.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aurantiacus J-10-fl] gi|222450176|gb|ACM54442.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus sp. Y-400-fl] Length = 1113 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 46/137 (33%), Gaps = 20/137 (14%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAG 108 + R Y +A+L ++ + +A N +FP ++ Y+ G Sbjct: 993 ANDRIAESFYRRALLAIRNGEYDQAIRDLNRATALQANFP------EAYYWLGRAYYAQG 1046 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + + A ++ IT P Y + Y+ +I + DQ ++ R Sbjct: 1047 RSESALQAIQQAITLNPN--------YSEAIFYSGLIAE---DQANFAAARDAYQTLISR 1095 Query: 169 YTNSPYVKGARFYVTVG 185 S + + A + Sbjct: 1096 EPTSEWGQRALAQIERL 1112 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 66/219 (30%), Gaps = 45/219 (20%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + N+ A YF + P + +A + + + P+ Sbjct: 873 QGNWGVALAYFETAAAL-PGGDTNAAAQFWLGEALLRNDNLVRALAAYQRALELQPQYPE 931 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR--- 186 L+G++ Y + LQ + R +++ S Y + F + + Sbjct: 932 A-----LLGLA------QTQYALGRAEEALQTVERAIQQ--KSNYAEAHLFRGKLLQEAG 978 Query: 187 ----------------NQLAAKEVEIGRYYLKRGEYVAAI---PRFQLVLANYSDAEHAE 227 +++A ++ GEY AI R + AN+ Sbjct: 979 RFAEARAAYDAAIGANDRIAESFYRRALLAIRNGEYDQAIRDLNRATALQANFP------ 1032 Query: 228 EAMARLVEAYVALALMDEAREVVS---LIQERYPQGYWA 263 EA L AY A + A + + + Y + + Sbjct: 1033 EAYYWLGRAYYAQGRSESALQAIQQAITLNPNYSEAIFY 1071 >gi|39998367|ref|NP_954318.1| hypothetical protein GSU3278 [Geobacter sulfurreducens PCA] gi|39985313|gb|AAR36668.1| hypothetical protein GSU3278 [Geobacter sulfurreducens PCA] Length = 966 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 1/69 (1%) Query: 194 VEIGRYY-LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 + I + ++ +Y AAI R + VL Y D + A+ L A +A +S Sbjct: 48 IFIAGFNAYQKKDYQAAIDRMKTVLDKYPDTPLRDMAIFWLARASFKAGYERDAARYMSQ 107 Query: 253 IQERYPQGY 261 + YP Sbjct: 108 FFKEYPDSP 116 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 14/110 (12%), Positives = 38/110 (34%), Gaps = 6/110 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + F T +A ++ S + +++ +++++ A + Sbjct: 13 MKSFRTTFVRCLAGYLIIASLLTS------PAFAVTSEDSQIFIAGFNAYQKKDYQAAID 66 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 +P + ++ A + AG + AA ++ +YP+S Sbjct: 67 RMKTVLDKYPDTPLRDMAIFWLARASFKAGYERDAARYMSQFFKEYPDSP 116 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 9/86 (10%) Query: 89 FAGVARKSLLMSA-FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 FA + S + A F Y YQ A + + +YP++ D + + + + Sbjct: 39 FAVTSEDSQIFIAGFNAYQKKDYQAAIDRMKTVLDKYPDTPLRDMAIFWLARASFKA--G 96 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSP 173 D +YMS+ + Y +SP Sbjct: 97 YERD------AARYMSQFFKEYPDSP 116 >gi|229592293|ref|YP_002874412.1| hypothetical protein PFLU4906 [Pseudomonas fluorescens SBW25] gi|229364159|emb|CAY51806.1| putative exported protein [Pseudomonas fluorescens SBW25] Length = 278 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ Y+ A +K ++F +A + F R +P + A + V + G Sbjct: 151 EPGDPAKEKLYYDAAFDLIKAKDFDRASQAFTAFLRKYPNSQYAGNAQYWLGEVNLAKGD 210 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + YP+ V Y + DV T + + ++V +Y Sbjct: 211 LQGAGQAFAKVSQLYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQY 262 Query: 170 TNSPYVKGARFYVTVG 185 + + A+ + Sbjct: 263 PGTSAAQLAQRDLQRL 278 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 54/147 (36%), Gaps = 22/147 (14%) Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 P + +YY +I+ +D+ Q + + +Y NS Y A++++ Sbjct: 152 PGDPAKEKLYYDAA---FDLIKAKDFDR-----ASQAFTAFLRKYPNSQYAGNAQYWLGE 203 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 LA +++ A F V Y +++ +L + L D Sbjct: 204 VN--LAKGDLQ------------GAGQAFAKVSQLYPKHAKVPDSLYKLADVERRLGHTD 249 Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271 + + ++ + +YP A+ + ++ Sbjct: 250 KVKGILQQVVAQYPGTSAAQLAQRDLQ 276 >gi|298507307|gb|ADI86030.1| pentapeptide repeat protein [Geobacter sulfurreducens KN400] Length = 952 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 1/69 (1%) Query: 194 VEIGRYY-LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 + I + ++ +Y AAI R + VL Y D + A+ L A +A +S Sbjct: 39 IFIAGFNAYQKKDYQAAIDRMKTVLDKYPDTPLRDMAIFWLARASFKAGYERDAARYMSQ 98 Query: 253 IQERYPQGY 261 + YP Sbjct: 99 FFKEYPDSP 107 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 14/110 (12%), Positives = 38/110 (34%), Gaps = 6/110 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + F T +A ++ S + +++ +++++ A + Sbjct: 4 MKSFRTTFVRCLAGYLIIASLLTS------PAFAVTSEDSQIFIAGFNAYQKKDYQAAID 57 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 +P + ++ A + AG + AA ++ +YP+S Sbjct: 58 RMKTVLDKYPDTPLRDMAIFWLARASFKAGYERDAARYMSQFFKEYPDSP 107 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 9/86 (10%) Query: 89 FAGVARKSLLMSA-FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 FA + S + A F Y YQ A + + +YP++ D + + + + Sbjct: 30 FAVTSEDSQIFIAGFNAYQKKDYQAAIDRMKTVLDKYPDTPLRDMAIFWLARASFKA--G 87 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSP 173 D +YMS+ + Y +SP Sbjct: 88 YERD------AARYMSQFFKEYPDSP 107 >gi|188534418|ref|YP_001908215.1| tol-pal system protein YbgF [Erwinia tasmaniensis Et1/99] gi|188029460|emb|CAO97337.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99] Length = 270 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 47/152 (30%), Gaps = 9/152 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPF 89 A + +S + + Y AV L+++ + A F + +P Sbjct: 123 AAADNSADSKAASNNAAASTPVQSGDANTDYNAAVALVLEKKQYDSAISAFQAFVKKYPD 182 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 183 STFQPNANYWLGQLNYNKGKKDDAAYYFATVVKNYPKSPKSADALFKVGVIMQEKGDKA- 241 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 ++++ Y NS K + Sbjct: 242 -------KAKAVYQQVIKLYPNSEAAKLSEKR 266 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 39/111 (35%), Gaps = 14/111 (12%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + V++Y +S + A +++ +G+ A F V+ Sbjct: 169 AISAFQAFVKKYPDSTFQPNANYWLGQLN--------------YNKGKKDDAAYYFATVV 214 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 NY + + +A+ ++ +A+ V + + YP A+ E Sbjct: 215 KNYPKSPKSADALFKVGVIMQEKGDKAKAKAVYQQVIKLYPNSEAAKLSEK 265 Score = 45.1 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 27/66 (40%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ +Y +AI FQ + Y D+ A L + D+A + + + YP+ Sbjct: 161 LEKKQYDSAISAFQAFVKKYPDSTFQPNANYWLGQLNYNKGKKDDAAYYFATVVKNYPKS 220 Query: 261 YWARYV 266 + Sbjct: 221 PKSADA 226 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 22/119 (18%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y A S + ++ +YP+S Y +G + Y + +V+ Sbjct: 164 KQYDSAISAFQAFVKKYPDSTFQPNANYWLGQLNYNKGKKDD--------AAYYFATVVK 215 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 Y SP A F V V ++G+ A +Q V+ Y ++E A Sbjct: 216 NYPKSPKSADALFKVGVIMQ--------------EKGDKAKAKAVYQQVIKLYPNSEAA 260 >gi|183221520|ref|YP_001839516.1| TPR repeat-containing protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911604|ref|YP_001963159.1| hypothetical protein LBF_2084 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776280|gb|ABZ94581.1| Conserved hypothetical protein containing tetratricopeptide repeat (TPR) domains [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779942|gb|ABZ98240.1| Putative TPR-repeat-containing protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 700 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 79/209 (37%), Gaps = 24/209 (11%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++ A L+ K+ +A F + R P + + + + +Y ++ + Sbjct: 389 DSLFALAELYYKKGELVEAESLFRRIIRLTPGDTYSETAYVNLGIILDEMERYSESIAAF 448 Query: 118 EEYITQYPESKNVDYVYYLVGMSYA----------QMIRDVPYDQR--ATKLMLQYMSRI 165 E ++ P++++ YY +G+SY + + D ++L + + Sbjct: 449 EGALSLNPKNQS---AYYNLGLSYLHAGKPTMAIESLRKSQALDPNHVPSRLAIADYY-L 504 Query: 166 VERYTN---SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 R+ N S Y + A + A +++ Y++ Y AA VL N D Sbjct: 505 ENRFYNEAISEY-EEAIAWKPELYE--AR--LKLADVYIQTKNYQAAEKMLVYVLENAKD 559 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS 251 + + A +L +Y + + +++ Sbjct: 560 PKEIKLAHRKLALSYASSGNVGSSKKAKE 588 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 70/209 (33%), Gaps = 28/209 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A+ +LK+ N ++A F + + P + A S + Y Y +A E Sbjct: 253 YNLAISYLKQGNLAEAISEFQKVVQTAPNSQTAVLSYGHLGTIFYQREDYDRAEYYFREV 312 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-- 178 I YY +G+ Y + + + + L + E Y Y+ A Sbjct: 313 IRLKTGDAK---AYYNLGLVYLKK-KVPEEAAKYFQKALDANANEPEVY---RYIADAFL 365 Query: 179 -----RFYVTVGRNQL------AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 +T + L + Y K+GE V A F+ ++ ++E Sbjct: 366 SMGQTNMAITALKKALLLKPSDVDSLFALAELYYKKGELVEAESLFRRIIRLTPGDTYSE 425 Query: 228 EAMARLVEAYVALALM-DEAREVVSLIQE 255 AYV L ++ DE I Sbjct: 426 -------TAYVNLGIILDEMERYSESIAA 447 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 80/252 (31%), Gaps = 59/252 (23%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRD------FPFAGVA------------ 93 + Y +++LK++ +A +YF + + + + A Sbjct: 316 KTGDAKAYYNLGLVYLKKKVPEEAAKYFQKALDANANEPEVYRYIADAFLSMGQTNMAIT 375 Query: 94 --RKSLL----------MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 +K+LL A + Y G+ +A SL I P + Y +G+ Sbjct: 376 ALKKALLLKPSDVDSLFALAELYYKKGELVEAESLFRRIIRLTPGDTYSETAYVNLGIIL 435 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYT--NSPYVKGARFYVTVGRNQLA----AKE-- 193 +M R + + S Y Y+ G+ +A K Sbjct: 436 DEMERYS--------ESIAAFEGALSLNPKNQSAYYNLGLSYLHAGKPTMAIESLRKSQA 487 Query: 194 ---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 + I YYL+ Y AI ++ +A EA +L + Y+ Sbjct: 488 LDPNHVPSRLAIADYYLENRFYNEAISEYEEAIAW---KPELYEARLKLADVYIQTKNYQ 544 Query: 245 EAREVVSLIQER 256 A +++ + E Sbjct: 545 AAEKMLVYVLEN 556 >gi|77362059|ref|YP_341633.1| putative lytic cell-wall binding lipoprotein [Pseudoalteromonas haloplanktis TAC125] gi|76876970|emb|CAI89187.1| putative lytic cell-wall binding lipoprotein [Pseudoalteromonas haloplanktis TAC125] Length = 577 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 81/258 (31%), Gaps = 33/258 (12%) Query: 22 FALTIF-FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 LTI ++ C S + V + + R A+ +L N S+A Sbjct: 5 LVLTISTLALGGCVTENSYNGSDKPVVENKINSAGAARTRIALALQYLNTGNNSQAKYNL 64 Query: 81 NQCSRDFPFAGVAR---KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV--DYVYY 135 + + A + A+ G+ + A ++ + P+ N +Y + Sbjct: 65 ERA------SEYAPNLPEVHYSLAYYYQQVGENKLADLAYQKALAIKPDDPNTLNNYGVF 118 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-------SPYVKGARFYVTVGRNQ 188 L G+ D DQ + + R+ + Y N A Y N Sbjct: 119 LCGIDEY----DRATDQFLKAIAIPSYIRVAQSYENLALCAIEFDDFDNAETYFQQAINH 174 Query: 189 LAAKEVE----IGRYYLKRGEYVAAIPRFQLVLANYSDAEHA-EEAMARLVEAYVALALM 243 + + YY K Y A+ +L Y D A+ + + Sbjct: 175 SSQRASTLISLAALYYAKSDLYKASA-----LLKRYDDTAQISPRALLLSYLIKQRMGKI 229 Query: 244 DEAREVVSLIQERYPQGY 261 +EA ++ + I + YP Sbjct: 230 EEAEKIAATILQTYPSSD 247 >gi|295096554|emb|CBK85644.1| tol-pal system protein YbgF [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 165 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 45/123 (36%), Gaps = 9/123 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F + +P + + + Y+ GK AA Sbjct: 47 YNAAIALVQDKSRQDDAIVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAFYFAS 106 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S Y VG+ + D+ T ++V ++ + K A+ Sbjct: 107 VVKNYPKSPKAPDAMYKVGV--------IMQDKGDTAKAKAVYQQVVAKFPGTDGAKQAQ 158 Query: 180 FYV 182 + Sbjct: 159 KRL 161 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + V++Y +S Y A +++ Sbjct: 43 ANTDYNAAIALVQDKSRQDDAIVAFQNFVKKYPDSTYQPNANYWLGQLN----------- 91 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 Y K + AA F V+ NY + A +AM ++ +A+ V + ++ Sbjct: 92 --YNKGKKDDAAFY-FASVVKNYPKSPKAPDAMYKVGVIMQDKGDTAKAKAVYQQVVAKF 148 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 149 PGTDGAKQAQK 159 >gi|255020133|ref|ZP_05292203.1| TPR repeat containing exported protein; Putative periplasmic protein contains a protein prenylyltransferase domain [Acidithiobacillus caldus ATCC 51756] gi|254970426|gb|EET27918.1| TPR repeat containing exported protein; Putative periplasmic protein contains a protein prenylyltransferase domain [Acidithiobacillus caldus ATCC 51756] Length = 276 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 15/135 (11%) Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 +G + Q D+ + + + +Y S V A +++ + L + Sbjct: 153 LGQADYQRAFDLLR-AGKYGSAVTALQDFIRKYPQSSLVVNAYYWLGQAQYVLGQND--- 208 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 AAI V Y+ + A EAM RL E Y A +AR V++ + ++ Sbjct: 209 -----------AAIKSLSTVENQYAQSSLAPEAMLRLAEVYQATGQATKARAVLNKVLKQ 257 Query: 257 YPQGYWARYVETLVK 271 YP A+ + ++ Sbjct: 258 YPSTPSAQKAQARLQ 272 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 52/139 (37%), Gaps = 22/139 (15%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 ++ AF AGKY A + +++I +YP+S V YY +G + + ++ Sbjct: 155 QADYQRAFDLLRAGKYGSAVTALQDFIRKYPQSSLVVNAYYWLGQAQYVLGQN------- 207 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 ++ +S + +Y S A + Y G+ A Sbjct: 208 -DAAIKSLSTVENQYAQSSLAPEAMLRL--------------AEVYQATGQATKARAVLN 252 Query: 215 LVLANYSDAEHAEEAMARL 233 VL Y A++A ARL Sbjct: 253 KVLKQYPSTPSAQKAQARL 271 Score = 52.8 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 40/125 (32%), Gaps = 8/125 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y++A L+ + A R +P + + + QY G+ A Sbjct: 158 YQRAFDLLRAGKYGSAVTALQDFIRKYPQSSLVVNAYYWLGQAQYVLGQNDAAIKSLSTV 217 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 QY +S + Y +++++++Y ++P + A+ Sbjct: 218 ENQYAQSSLAPEAMLRLAEVYQAT--------GQATKARAVLNKVLKQYPSTPSAQKAQA 269 Query: 181 YVTVG 185 + Sbjct: 270 RLQAM 274 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 32/94 (34%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + +D Y A + + + + +A ++ Sbjct: 171 GSAVTALQDFIRKYPQSSLVVNAYYWLGQAQYVLGQNDAAIKSLSTVENQYAQSSLAPEA 230 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 +L A V + G+ +A ++ + + QYP + + Sbjct: 231 MLRLAEVYQATGQATKARAVLNKVLKQYPSTPSA 264 >gi|224372380|ref|YP_002606752.1| TPR repeat protein [Nautilia profundicola AmH] gi|223589863|gb|ACM93599.1| TPR repeat protein [Nautilia profundicola AmH] Length = 297 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 54/142 (38%), Gaps = 18/142 (12%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDF--PFAGVARKSLLMSAFVQ 104 L+ + + +A + +KA E F + + + + Sbjct: 170 LNKPAKNINPKTAFAQAKKYFYSGKLNKAEELFAYTLQKKYLPATSSY------YLGEIA 223 Query: 105 YSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y G+Y++A + ++ I+ YP+ + D + Y GMS+ ++ + + Sbjct: 224 YKQGRYKEALAFYKKSISLYPKKTSFTDRLLYHTGMSFLKLNQK--------QNAKLTFK 275 Query: 164 RIVERYTNSPYVKGARFYVTVG 185 +++ + NS Y K A+ + Sbjct: 276 KLISDFPNSKYAKLAKKELEKL 297 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 29/80 (36%), Gaps = 1/80 (1%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEAYVALALMDEARE 248 A +G K+G Y A+ ++ ++ Y + + +++ L A+ Sbjct: 213 ATSSYYLGEIAYKQGRYKEALAFYKKSISLYPKKTSFTDRLLYHTGMSFLKLNQKQNAKL 272 Query: 249 VVSLIQERYPQGYWARYVET 268 + +P +A+ + Sbjct: 273 TFKKLISDFPNSKYAKLAKK 292 >gi|299138484|ref|ZP_07031663.1| TPR repeat-containing protein [Acidobacterium sp. MP5ACTX8] gi|298599730|gb|EFI55889.1| TPR repeat-containing protein [Acidobacterium sp. MP5ACTX8] Length = 322 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 50/140 (35%), Gaps = 8/140 (5%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 +R S +D ++Y A ++ A F+ + +P +A + Sbjct: 180 TRPDAKPSASDAPPVADMYRTAYSDYMGAKYALASSEFDDLIKAYPDDNLAGNAYFYIGE 239 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + K A + + +YP++ + + G + M ++ ++ + Sbjct: 240 INSKTQKPTAAVKSYDHLLERYPDNAKIPAAHLHKGEALLAMKQN--------DAGIREL 291 Query: 163 SRIVERYTNSPYVKGARFYV 182 +++R+ SP AR + Sbjct: 292 RSLIQRFPQSPEASQARSKL 311 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 35/106 (33%), Gaps = 16/106 (15%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-VEIGRYYLKRGEYVAAIPRFQL 215 L +++ Y + + LA IG K + AA+ + Sbjct: 212 LASSEFDDLIKAYPD---------------DNLAGNAYFYIGEINSKTQKPTAAVKSYDH 256 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +L Y D A EA +A+ D + + +R+PQ Sbjct: 257 LLERYPDNAKIPAAHLHKGEALLAMKQNDAGIRELRSLIQRFPQSP 302 >gi|146306311|ref|YP_001186776.1| TPR repeat-containing protein [Pseudomonas mendocina ymp] gi|145574512|gb|ABP84044.1| Tetratricopeptide TPR_2 repeat protein [Pseudomonas mendocina ymp] Length = 270 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 44/136 (32%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ Y+ A +K ++F KA + F +P + A + V + G Sbjct: 143 EPGDPAKEKLYYDAAFDLIKAKDFDKASQAFTAFLNRYPNSQYAGNAQYWLGEVNLAKGD 202 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + YP V + + DV + +++ +Y Sbjct: 203 LQAAGQAFAKVSQAYPSHAKVPDSLFKLA--------DVERRLGNNDKARGILQQVIAQY 254 Query: 170 TNSPYVKGARFYVTVG 185 S + A+ + Sbjct: 255 PGSSAAQLAQRDLQRL 270 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + RY NS Y A++++ LA +++ Sbjct: 158 FDLIKAKDFD-----KASQAFTAFLNRYPNSQYAGNAQYWLGEVN--LAKGDLQ------ 204 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 AA F V Y +++ +L + L D+AR ++ + +YP Sbjct: 205 ------AAGQAFAKVSQAYPSHAKVPDSLFKLADVERRLGNNDKARGILQQVIAQYPGSS 258 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 259 AAQLAQRDLQ 268 >gi|145605685|ref|XP_370444.2| hypothetical protein MGG_06941 [Magnaporthe oryzae 70-15] gi|145013485|gb|EDJ98126.1| hypothetical protein MGG_06941 [Magnaporthe oryzae 70-15] Length = 478 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 18/143 (12%), Positives = 41/143 (28%), Gaps = 21/143 (14%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAA 114 E+ + + ++ KA E + Q P + ++ Y A Sbjct: 8 ATELKNQGNKAFQSHDWPKAIELYTQAIELNPEEPTLYSNRAQ-----AYLKTEAYGYAV 62 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + + I P YY ++ ++R P D L+ V+ + Sbjct: 63 ADATKAIELNPGFVK---AYYRRAIANTAILR--PRD------ALKDFKSCVKIDPGNK- 110 Query: 175 VKGARFYVTVGRNQLAAKEVEIG 197 A+ + + + + Sbjct: 111 --DAKLKLVECQKVVRQLDFYAA 131 >gi|331645893|ref|ZP_08346996.1| putative periplasmic protein [Escherichia coli M605] gi|281177885|dbj|BAI54215.1| conserved hypothetical protein [Escherichia coli SE15] gi|330910493|gb|EGH39003.1| TPR repeat containing exported protein [Escherichia coli AA86] gi|331044645|gb|EGI16772.1| putative periplasmic protein [Escherichia coli M605] Length = 263 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F +++P + + + Y+ GK AA Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ T +++ +Y + K A+ Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 180 FYVTVG 185 + Sbjct: 258 KRLNAM 263 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|289207753|ref|YP_003459819.1| tol-pal system protein YbgF [Thioalkalivibrio sp. K90mix] gi|288943384|gb|ADC71083.1| tol-pal system protein YbgF [Thioalkalivibrio sp. K90mix] Length = 276 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 43/107 (40%), Gaps = 5/107 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ Y++A L +++ A + +P + + + A +Y++G ++ A Sbjct: 153 EQAAYQEAFEQLMAGDYNAAMSGLERFIETYPDSDYSANAWYWLAEAKYASGDFEAALED 212 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 E QYPES +G ++ ++ + + L+ + Sbjct: 213 FEHLREQYPESDKSGDALLKIGYAHYELGNEDE-----AREALEAVR 254 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 34/101 (33%), Gaps = 13/101 (12%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 ++ AF Q AG Y A S E +I YP+S +Y + + Sbjct: 153 EQAAYQEAFEQLMAGDYNAAMSGLERFIETYPDSDYSANAWYWLAEAKYAS--------G 204 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 + L+ + E+Y S A + A E+ Sbjct: 205 DFEAALEDFEHLREQYPESDKSGDALLKIGY-----AHYEL 240 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 45/101 (44%), Gaps = 14/101 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + R +E Y +S Y A +++ + G++ AA+ F+ + Sbjct: 171 AAMSGLERFIETYPDSDYSANAWYWLAEAK--------------YASGDFEAALEDFEHL 216 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 Y +++ + +A+ ++ A+ L DEARE + ++ + Sbjct: 217 REQYPESDKSGDALLKIGYAHYELGNEDEAREALEAVRADF 257 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 G+Y AA+ + + Y D++++ A L EA A + A E ++E+YP+ Sbjct: 167 GDYNAAMSGLERFIETYPDSDYSANAWYWLAEAKYASGDFEAALEDFEHLREQYPESD-- 224 Query: 264 RYVETLVK 271 + + L+K Sbjct: 225 KSGDALLK 232 >gi|113478146|ref|YP_724207.1| TPR repeat-containing serine/threonine protein kinase [Trichodesmium erythraeum IMS101] gi|110169194|gb|ABG53734.1| serine/threonine protein kinase with TPR repeats [Trichodesmium erythraeum IMS101] Length = 746 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 70/226 (30%), Gaps = 49/226 (21%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 Y ++ Y + + + +N+ A + + P + V + Sbjct: 370 YSKAIKGFEKPEYFYGRGNAYYELKNYQNAISDYTKAILLNPSN---VNAYFNRGVVYFE 426 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y +A + + + PE YY G+ Y + + +Q ++++ Sbjct: 427 QQNYPKAINDFTQILRLQPEH---AEAYYKRGLVYYKSQDYL--------KAIQDYTQVI 475 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEV--EIGRY-------------YLKRGEYVAAIP 211 N+ A Y+ G A + I Y Y +RG Sbjct: 476 GLRPNTLDAYNA--YLGRGVAYAANNNLQKAIADYTQMIKIKPQKIDGYYRRG------- 526 Query: 212 RFQLVLANYSDA-----------EHAEEAMARLVEAYVALALMDEA 246 R + + +Y + E+A AR Y+ LA ++A Sbjct: 527 RARFFMGDYQGSLDDYNQVIKINPKNEDAYARRCSTYLNLAEYEKA 572 Score = 52.0 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 63/202 (31%), Gaps = 46/202 (22%) Query: 52 TDVRYQREVYEKAVLFLKEQN-------FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + +V+++ ++ + +SKA + F + + + Sbjct: 342 PNSIKAEKVFKQGEERARDGDIPAAILLYSKAIKGFEKPE--YFYGR---------GNAY 390 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y YQ A S + I P + N Y+ G+ Y + Q+ + ++ Sbjct: 391 YELKNYQNAISDYTKAILLNPSNVN---AYFNRGVVYFE--------QQNYPKAINDFTQ 439 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 I+ + + G Y K +Y+ AI + V+ + Sbjct: 440 ILRLQP--EHAEAYYKR---------------GLVYYKSQDYLKAIQDYTQVIGLRPNTL 482 Query: 225 HAEEAMARLVEAYVALALMDEA 246 A A AY A + +A Sbjct: 483 DAYNAYLGRGVAYAANNNLQKA 504 >gi|319760472|ref|YP_004124410.1| tol-pal system protein YbgF [Candidatus Blochmannia vafer str. BVAF] gi|318039186|gb|ADV33736.1| tol-pal system protein YbgF [Candidatus Blochmannia vafer str. BVAF] Length = 243 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 44/121 (36%), Gaps = 8/121 (6%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 L+++ + +A + F +++P + + + Y+ A+ + YP+S Sbjct: 131 LEKKQYDRAIQTFQDFIKNYPQSNYQPNAHYWLGQLYYNQNDKNNASYHFALVVKNYPKS 190 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 +G+ Q + ++ + Y NS K A+ +T +N Sbjct: 191 SKAPDALLKIGII-MQETNQID-------KSKTIYKQLGKLYPNSNAAKHAQKQLTYLKN 242 Query: 188 Q 188 + Sbjct: 243 K 243 Score = 55.9 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 52/140 (37%), Gaps = 21/140 (15%) Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 N++ Y + +S + +Q ++ Y S Y A +++ Sbjct: 117 NIEDADYKLAVSLVLEKKQYDR-------AIQTFQDFIKNYPQSNYQPNAHYWL------ 163 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 G+ Y + + A F LV+ NY + A +A+ ++ +D+++ Sbjct: 164 --------GQLYYNQNDKNNASYHFALVVKNYPKSSKAPDALLKIGIIMQETNQIDKSKT 215 Query: 249 VVSLIQERYPQGYWARYVET 268 + + + YP A++ + Sbjct: 216 IYKQLGKLYPNSNAAKHAQK 235 Score = 43.2 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ +Y AI FQ + NY + + A L + Y + A +L+ + YP+ Sbjct: 131 LEKKQYDRAIQTFQDFIKNYPQSNYQPNAHYWLGQLYYNQNDKNNASYHFALVVKNYPKS 190 Query: 261 YWARYVETLVK 271 + + L+K Sbjct: 191 S--KAPDALLK 199 >gi|170769032|ref|ZP_02903485.1| tol-pal system protein YbgF [Escherichia albertii TW07627] gi|170122104|gb|EDS91035.1| tol-pal system protein YbgF [Escherichia albertii TW07627] Length = 263 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F +++P + + + Y+ GK AA Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ T +++ +Y + K A+ Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 180 FYVTVG 185 + Sbjct: 258 KRLNAM 263 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 45/143 (31%), Gaps = 24/143 (16%) Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 N DY + D+ + ++ Y +S Y+ A +++ Sbjct: 140 GDPNTDY----------NAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQL 189 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 +G+ A F V+ NY + A +AM ++ + Sbjct: 190 N--------------YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAK 235 Query: 246 AREVVSLIQERYPQGYWARYVET 268 A+ V + +YP A+ + Sbjct: 236 AKAVYQQVISKYPGTDGAKQAQK 258 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|291288226|ref|YP_003505042.1| tol-pal system protein YbgF [Denitrovibrio acetiphilus DSM 12809] gi|290885386|gb|ADD69086.1| tol-pal system protein YbgF [Denitrovibrio acetiphilus DSM 12809] Length = 251 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 24/130 (18%) Query: 102 FVQ--YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + Y GKY ++ + E++ +YP+ + D Y +G ++ Y ++ + + Sbjct: 134 YAYELYRNGKYAESETKFNEFLMKYPDVERSDNAMYWLG--------EIKYAEKDYESAV 185 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 +VERY V A + ++ K+ A+ Q V+ Sbjct: 186 MKFQELVERYPEGNKVPDALLKMGYSYGNISDKD--------------NAVKSLQKVVNM 231 Query: 220 YSDAEHAEEA 229 Y +++ A A Sbjct: 232 YPESDAARLA 241 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 55/144 (38%), Gaps = 8/144 (5%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 +S + + +++ + +Y A + ++++ FN+ +P + ++ Sbjct: 112 KSGDEEVIIVEDNIQDKIGLYTYAYELYRNGKYAESETKFNEFLMKYPDVERSDNAMYWL 171 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 ++Y+ Y+ A +E + +YPE V +G SY + ++ Sbjct: 172 GEIKYAEKDYESAVMKFQELVERYPEGNKVPDALLKMGYSYGNISDK--------DNAVK 223 Query: 161 YMSRIVERYTNSPYVKGARFYVTV 184 + ++V Y S + A + Sbjct: 224 SLQKVVNMYPESDAARLATQKLRF 247 Score = 52.0 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 41/103 (39%), Gaps = 14/103 (13%) Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + + +Y + A +++ + +Y +A+ +FQ ++ Y Sbjct: 151 FNEFLMKYPDVERSDNAMYWLGEIK--------------YAEKDYESAVMKFQELVERYP 196 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 + +A+ ++ +Y ++ D A + + + YP+ AR Sbjct: 197 EGNKVPDALLKMGYSYGNISDKDNAVKSLQKVVNMYPESDAAR 239 Score = 35.5 bits (81), Expect = 7.6, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + G+Y + +F L Y D E ++ AM L E A + A + ERYP+G Sbjct: 139 YRNGKYAESETKFNEFLMKYPDVERSDNAMYWLGEIKYAEKDYESAVMKFQELVERYPEG 198 Query: 261 YWARYVETLVK 271 + + L+K Sbjct: 199 N--KVPDALLK 207 >gi|331656761|ref|ZP_08357723.1| putative periplasmic protein [Escherichia coli TA206] gi|222032478|emb|CAP75217.1| Uncharacterized protein ybgF [Escherichia coli LF82] gi|312945266|gb|ADR26093.1| tol-pal system protein YbgF [Escherichia coli O83:H1 str. NRG 857C] gi|315299255|gb|EFU58507.1| tol-pal system protein YbgF [Escherichia coli MS 16-3] gi|331055009|gb|EGI27018.1| putative periplasmic protein [Escherichia coli TA206] Length = 263 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F +++P + + + Y+ GK AA Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ T +++ +Y + K A+ Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 180 FYVTVG 185 + Sbjct: 258 KRLNAM 263 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|94970032|ref|YP_592080.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94552082|gb|ABF42006.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 1096 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 82/273 (30%), Gaps = 53/273 (19%) Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63 ++ R + I Y Y+ A+ A+ + D + ++++ Sbjct: 623 IMQREVPIKRFGDYHAYRLAVNSDHGQALTL-------TRTDASVAGAEKDAKADDLFDA 675 Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A ++ +N+ A E + P + A Y+AG +A ++ + Sbjct: 676 AQAAVRAENYQNAIELLQRALVLEPEHKYGWDA---LAETYYNAGDLNKAIEYYKKQLEV 732 Query: 124 YP----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 P + + VY M+ + L + E Sbjct: 733 NPYDDLANTGLAQVY----MTQYKYDD-----------ALAAFKKQAEINP--------- 768 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 ++ A + IG+ + R +Y AA+P + ++ + A L AY+ Sbjct: 769 ------LDKTA--HLGIGQVDIIREDYKAAVPELERAVSILPQSSV---ARYMLGNAYLN 817 Query: 240 LALMDEAREVVS---LIQERYPQGYWARYVETL 269 ++A + P W L Sbjct: 818 TGQTEKAITAFEESVKLDANNPMT-WNDIAYAL 849 >gi|320102982|ref|YP_004178573.1| tetratricopeptide repeat-containing protein [Isosphaera pallida ATCC 43644] gi|319750264|gb|ADV62024.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera pallida ATCC 43644] Length = 1053 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 39/140 (27%), Gaps = 8/140 (5%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 VR Y K + F A + + +A ++ LM + Sbjct: 911 EPSLTDPVRRAEATYAKGRALQGQARFDDARAAYQAVVANPNAGELAARAQLMLGETYFH 970 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 +Y+ A + Y Y V +Y + + + Q ++ Sbjct: 971 QKQYEVALREYLKVEVLYDAPVWQALALYAVAQTY-ERLNQLDR-------ARQTYDELL 1022 Query: 167 ERYTNSPYVKGARFYVTVGR 186 +R+ S AR + Sbjct: 1023 KRFPQSDRAVEARVRLETLN 1042 Score = 52.0 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 36/224 (16%), Positives = 63/224 (28%), Gaps = 57/224 (25%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE V + + +A + + P +A ++L G+++QAA+ E+ Sbjct: 502 YELGVNLYRLGRYDEAADALESYLKAVPETKIASQALAYLVMAHSRGGRFEQAAATLEQL 561 Query: 121 ITQYPESKNVDYV------------YYLVGMSYAQMIRDVPYDQRAT------------- 155 +P S N+ Y + I D DQ + Sbjct: 562 ARLHPNSNNLAVARVDLAERLYEAERYDQAEALFSPIAD---DQTSALRPQALSGRGWCR 618 Query: 156 ------KLMLQYMSRIVERYTNSP--------------------YVKGARFYVTVGR--- 186 + + +VE Y N P + Sbjct: 619 LKLDRPEEAARDFQILVETYANDPATPSNALILARTLQAIDRPNDALSVVDRLIERHPDF 678 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 ++LA + R LK AI ++ L Y A A+ Sbjct: 679 DRLADARLLQARLNLKVDRPEQAIAAYRSFLTTYPGHPEAINAL 722 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 67/200 (33%), Gaps = 26/200 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A L + A+ + + S Y G+Y +AA E Y Sbjct: 466 YQLARAALAHNDPETAFAIWRELGST-EGHPYVAASRYELGVNLYRLGRYDEAADALESY 524 Query: 121 ITQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + PE+K YLV M++++ R + + ++ + NS Sbjct: 525 LKAVPETKIASQALAYLV-MAHSRGGR--------FEQAAATLEQLARLHPNS------- 568 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + V R LA R Y + Y A F + + + +A++ + Sbjct: 569 NNLAVARVDLAE------RLY-EAERYDQAEALFSPIADD-QTSALRPQALSGRGWCRLK 620 Query: 240 LALMDEAREVVSLIQERYPQ 259 L +EA ++ E Y Sbjct: 621 LDRPEEAARDFQILVETYAN 640 Score = 43.2 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 64/200 (32%), Gaps = 16/200 (8%) Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY- 135 Y + P A + L +A + + G + +A +P S + Sbjct: 371 AAYLSIVQTR-PDDPFAPDAQLRAAELAFQRGDHLEARRRAAALAVTFPTSSWIPAARLV 429 Query: 136 --LVGMSYAQ----------MIRDVPYDQRATKLMLQYMSR--IVERYTNSPYVKGARFY 181 ++ Q +I + D + ++R + + + Sbjct: 430 EARAALASGQAEEAVTILTTLIENAQTDPALARAARYQLARAALAHNDPETAFAIWRELG 489 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 T G +AA E+G + G Y A + L + + A +A+A LV A+ Sbjct: 490 STEGHPYVAASRYELGVNLYRLGRYDEAADALESYLKAVPETKIASQALAYLVMAHSRGG 549 Query: 242 LMDEAREVVSLIQERYPQGY 261 ++A + + +P Sbjct: 550 RFEQAAATLEQLARLHPNSN 569 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 77/227 (33%), Gaps = 31/227 (13%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAA----SLG 117 L L+ + A + + D P +AR++ ++ + +L Sbjct: 805 GQLQLQAGDVEGATQTLDLLLNDQPPPPPELARQARFRLGEARFRSDNPASCRTVFEALL 864 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI------VERYTN 171 E+ + P+ N L ++ ++I+ +QR + L + R+ R Sbjct: 865 ED-LQSQPDDLNQPTNRLLWEVASLRLIQTDILEQR-WEAALAAIERLEPSLTDPVRRAE 922 Query: 172 SPYVK----GARFYVTVGR-------------NQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 + Y K + R A ++ +G Y + +Y A+ + Sbjct: 923 ATYAKGRALQGQARFDDARAAYQAVVANPNAGELAARAQLMLGETYFHQKQYEVALREYL 982 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 V Y A+ + + Y L +D AR+ + +R+PQ Sbjct: 983 KVEVLYDAPVWQALALYAVAQTYERLNQLDRARQTYDELLKRFPQSD 1029 >gi|218688533|ref|YP_002396745.1| tol-pal system protein YbgF [Escherichia coli ED1a] gi|306812851|ref|ZP_07447044.1| tol-pal system protein YbgF [Escherichia coli NC101] gi|218426097|emb|CAR06915.1| putative RNA binding protein [Escherichia coli ED1a] gi|305853614|gb|EFM54053.1| tol-pal system protein YbgF [Escherichia coli NC101] Length = 263 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F +++P + + + Y+ GK AA Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ T +++ +Y + K A+ Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 180 FYVTVG 185 + Sbjct: 258 KRLNAM 263 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|157273540|gb|ABV27439.1| probable soluble lytic transglycosylase [Candidatus Chloracidobacterium thermophilum] Length = 801 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 8/120 (6%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + ++ F E+N+ +A +F++ R++P + K + +AG+Y Sbjct: 284 PPVAQRAEALWSLGRAFFIEENWDEAVRWFDRAHREYPTSPEGEKGYYQAGHALQNAGRY 343 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 ++A + E +I YP+S+ + G ++ I D K L++ R +R+ Sbjct: 344 REAVARYEAFIAAYPDSEFI-------GGAHLNAI-DALRLAGDFKAALEWCDRAEKRFP 395 Score = 39.3 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 18/183 (9%), Positives = 46/183 (25%), Gaps = 63/183 (34%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 T ++ Y+ + +A + +P + + L + AG + Sbjct: 321 PTSPEGEKGYYQAGHALQNAGRYREAVARYEAFIAAYPDSEFIGGAHLNAIDALRLAGDF 380 Query: 111 QQAASLGEE---------------------YIT------------------QY---PESK 128 + A + +++ + P S Sbjct: 381 KAALEWCDRAEKRFPRELVGVTARFQRAKIFMSQGNWRAALSVLEDMQRLPLHRRGPGST 440 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY---TNSP---YVKGARFYV 182 + V +L G+ ++ R + +E Y ++ Y + A + Sbjct: 441 DASEVTFLRGLCLERLER---------------FAEAIEVYLSLPDTRTSYYGQQATERL 485 Query: 183 TVG 185 Sbjct: 486 LAL 488 >gi|83950086|ref|ZP_00958819.1| hypothetical protein ISM_03290 [Roseovarius nubinhibens ISM] gi|83837985|gb|EAP77281.1| hypothetical protein ISM_03290 [Roseovarius nubinhibens ISM] Length = 268 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 46/135 (34%), Gaps = 20/135 (14%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ +++A L N +KA E F+ +P ++ ++ ++ + G AA Sbjct: 145 EQSDFDRAKAELDAGNTAKAAELFSAFQTAYPGGPLSGQAGVLRGQALEAEGDLTGAARA 204 Query: 117 G------EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + E Y +G R + T ++ + ERY Sbjct: 205 YLDTFSADR------EGPAASTALYRLG-------RTLGRI-GQTNEACVTLTEVGERYP 250 Query: 171 NSPYVKGARFYVTVG 185 SP V A+ + Sbjct: 251 GSPAVAEAQGTMAEL 265 >gi|291569283|dbj|BAI91555.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 847 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 67/231 (29%), Gaps = 50/231 (21%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV----------YEKAVLFLKEQN 72 + IAV + + S+ + S T +Y R + Y + + ++ N Sbjct: 379 LVICLVGIAVVGVNTFRDNSTTEPTARSDTSSQYNRPLEIDINDATVYYSRGLTHRRQGN 438 Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 + A +N+ P A + F G Y+ A + I P N Sbjct: 439 YEAAIADYNRAIEINP--NYA-LAYNNRGFAHRRQGNYEAAIADYNRAIEINP---NYAL 492 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 Y G ++ Q + + +R +E N Y + + Sbjct: 493 AYNNRGFAH--------RRQGNYEAAIADYNRAIEINPN--YALAYNGR-GLTHRRQGNY 541 Query: 193 EVEIGRY-------------YLKR-------GEYVAAI---PRFQLVLANY 220 E I Y Y R G Y AAI R + NY Sbjct: 542 EAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNY 592 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 50/182 (27%), Gaps = 40/182 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + ++ N+ A +N+ P A + F G Y+ A + I Sbjct: 462 NRGFAHRRQGNYEAAIADYNRAIEINP--NYA-LAYNNRGFAHRRQGNYEAAIADYNRAI 518 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P N Y G+++ Q + + +R +E N Y Sbjct: 519 EINP---NYALAYNGRGLTH--------RRQGNYEAAIADYNRAIEINPN--YALAYNNR 565 Query: 182 VTVGRNQLAAKEVEIGRY-------------YLKRG-------EYVAAI---PRFQLVLA 218 + E I Y Y RG Y AAI R + Sbjct: 566 -GFAHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRSQGNYKAAIADYNRAIEINP 624 Query: 219 NY 220 NY Sbjct: 625 NY 626 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 49/181 (27%), Gaps = 40/181 (22%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + + ++ N+ A +N+ P A + F G Y+ A + I Sbjct: 531 RGLTHRRQGNYEAAIADYNRAIEINP--NYA-LAYNNRGFAHRRQGNYEAAIADYNRAIE 587 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 P N Y G ++ Q K + +R +E N A Sbjct: 588 INP---NYALAYNNRGFAH--------RSQGNYKAAIADYNRAIEINPN---YHNAYNNR 633 Query: 183 TVGRNQLAAKEVEIGRY-------------YLKRG-------EYVAAI---PRFQLVLAN 219 E I Y Y RG Y AAI R + N Sbjct: 634 GFAHRSQGNYEAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYKAAIADYNRAIEINPN 693 Query: 220 Y 220 Y Sbjct: 694 Y 694 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 57/207 (27%), Gaps = 44/207 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + N+ A +N+ P + F S G Y+ A + I Sbjct: 632 NRGFAHRSQGNYEAAIADYNRAIEINP--NY-HNAYNNRGFAHRSQGNYKAAIADYNRAI 688 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P N Y G ++ Q + + +R +E N Y Sbjct: 689 EINPNYHN---AYNNRGFAH--------RSQGNYEAAIADYNRAIEINPN--YALAYNGR 735 Query: 182 VTVGRNQLAAKEVEIGRY-------------YLKRG-------EYVAAIPRFQLVLANYS 221 + + E I Y Y RG Y AAI + + Sbjct: 736 -GLTHRRQGNYEAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEINP 794 Query: 222 DAEHAEEAMARL--VEAYVALALMDEA 246 + A+A +AY L +A Sbjct: 795 NY-----ALAYKNRGDAYKVLGEKQKA 816 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 48/182 (26%), Gaps = 40/182 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + N+ A +N+ P + F S G Y+ A + I Sbjct: 598 NRGFAHRSQGNYKAAIADYNRAIEINP--NY-HNAYNNRGFAHRSQGNYEAAIADYNRAI 654 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P N Y G ++ Q K + +R +E N A Sbjct: 655 EINPNYHN---AYNNRGFAH--------RSQGNYKAAIADYNRAIEINPN---YHNAYNN 700 Query: 182 VTVGRNQLAAKEVEIGRY---------YL-----------KRGEYVAAI---PRFQLVLA 218 E I Y Y ++G Y AAI R + Sbjct: 701 RGFAHRSQGNYEAAIADYNRAIEINPNYALAYNGRGLTHRRQGNYEAAIADYNRAIEINP 760 Query: 219 NY 220 NY Sbjct: 761 NY 762 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 49/182 (26%), Gaps = 40/182 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + ++ N+ A +N+ P A + F S G Y+ A + I Sbjct: 564 NRGFAHRRQGNYEAAIADYNRAIEINP--NYA-LAYNNRGFAHRSQGNYKAAIADYNRAI 620 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P N Y G ++ Q + + +R +E N A Sbjct: 621 EINPNYHN---AYNNRGFAH--------RSQGNYEAAIADYNRAIEINPN---YHNAYNN 666 Query: 182 VTVGRNQLAAKEVEIGRY-------------YLKRG-------EYVAAI---PRFQLVLA 218 + I Y Y RG Y AAI R + Sbjct: 667 RGFAHRSQGNYKAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEINP 726 Query: 219 NY 220 NY Sbjct: 727 NY 728 Score = 43.2 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 48/166 (28%), Gaps = 30/166 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASL 116 + + N+ A +N+ P A A+ G Y+ A + Sbjct: 700 NRGFAHRSQGNYEAAIADYNRAIEINP--NYA------LAYNGRGLTHRRQGNYEAAIAD 751 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS--PY 174 I P N Y G ++ Q + + +R +E N Y Sbjct: 752 YNRAIEINPNYHN---AYNNRGFAH--------RSQGNYEAAIADYNRAIEINPNYALAY 800 Query: 175 VKGARFYVTVGRNQLAAKEVE-IGRYYLKRGE---YVAAIPRFQLV 216 Y +G Q A + + Y K+ Y A+ + + Sbjct: 801 KNRGDAYKVLGEKQKAGSDWQTAANLYRKQDNNAGYQGAMNSLRSL 846 >gi|126733591|ref|ZP_01749338.1| hypothetical protein RCCS2_05529 [Roseobacter sp. CCS2] gi|126716457|gb|EBA13321.1| hypothetical protein RCCS2_05529 [Roseobacter sp. CCS2] Length = 271 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 40/132 (30%), Gaps = 24/132 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK--------YQQA 113 E+A L +F A + +P + + Y G+ + A Sbjct: 153 ERAQGALASGDFRSAVDQLTAFVTTYPGSPLTT-------DANYLKGEALEGLGDTTEAA 205 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + E + P + +G S ++ T+ ++ + R+ +P Sbjct: 206 RAYLEAFSGD-PTGPKAPDALFKLGSSLGKI--------GQTQDACLTLAEVNVRFPGNP 256 Query: 174 YVKGARFYVTVG 185 V A+ + Sbjct: 257 AVVDAQTEMQAL 268 Score = 40.1 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 17/129 (13%), Positives = 39/129 (30%), Gaps = 20/129 (15%) Query: 138 GMSYAQMIRDVPYDQRA-----TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 ++ + D+ Q A + + ++ V Y SP A + L Sbjct: 143 ALAIGEQT-DIERAQGALASGDFRSAVDQLTAFVTTYPGSPLTTDANYLKGEALEGL--- 198 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 G+ A + + A +A+ +L + + +A ++ Sbjct: 199 -----------GDTTEAARAYLEAFSGDPTGPKAPDALFKLGSSLGKIGQTQDACLTLAE 247 Query: 253 IQERYPQGY 261 + R+P Sbjct: 248 VNVRFPGNP 256 >gi|330811385|ref|YP_004355847.1| hypothetical protein PSEBR_c2g93 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379493|gb|AEA70843.1| Conserved hypothetical protein; putative exported protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 279 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 47/128 (36%), Gaps = 8/128 (6%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D ++ Y+ A +K ++F KA + F R +P + A + V + G Q Sbjct: 155 DPAKEKLYYDAAFDLIKAKDFDKASQAFAAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQG 214 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A + YP+ V Y + DV T + + ++V +Y + Sbjct: 215 AGQAFAKVSQLYPKHAKVPDSLYKLA--------DVERRLGHTDKVKGILQQVVAQYPGT 266 Query: 173 PYVKGARF 180 + A+ Sbjct: 267 SAAQLAQR 274 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 19/130 (14%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +I+ +D Q + + +Y NS Y A++++ LA +++ Sbjct: 167 FDLIKAKDFD-----KASQAFAAFLRKYPNSQYAGNAQYWLGEVN--LAKGDLQ------ 213 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A F V Y +++ +L + L D+ + ++ + +YP Sbjct: 214 ------GAGQAFAKVSQLYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTS 267 Query: 262 WARYVETLVK 271 A+ + ++ Sbjct: 268 AAQLAQRDLQ 277 >gi|291612992|ref|YP_003523149.1| tol-pal system protein YbgF [Sideroxydans lithotrophicus ES-1] gi|291583104|gb|ADE10762.1| tol-pal system protein YbgF [Sideroxydans lithotrophicus ES-1] Length = 251 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 44/151 (29%), Gaps = 8/151 (5%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G + D + + ++ A F K +N+ A F +++P + Sbjct: 109 AGGTTSAPADSGTGAAAGQGGEERAFDAAYSFYKAENYQNAVTAFGGFLKNYPQSAHEAN 168 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 L + Y+ S E +YP+ V + R Sbjct: 169 VLYWMGNSYFLLKDYKSCVSSYESLAGKYPDHPRVAE--------TMLNTAECQLGLRNK 220 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + + ++ ++ S A+ + + Sbjct: 221 TAAKRTLKLLISKFPGSDASDKAKKRLAAIK 251 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 22/136 (16%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 +A+ Y A YQ A + ++ YP+S + V Y +G SY + + K Sbjct: 135 DAAYSFYKAENYQNAVTAFGGFLKNYPQSAHEANVLYWMGNSYFLL--------KDYKSC 186 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + + +Y + P V + L K AA +L+++ Sbjct: 187 VSSYESLAGKYPDHPRVAETMLNTAECQLGLRNK--------------TAAKRTLKLLIS 232 Query: 219 NYSDAEHAEEAMARLV 234 + ++ +++A RL Sbjct: 233 KFPGSDASDKAKKRLA 248 Score = 44.3 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 14/116 (12%), Positives = 36/116 (31%), Gaps = 14/116 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + + ++ Y S + +++ G Y +Y + + Sbjct: 144 ENYQNAVTAFGGFLKNYPQSAHEANVLYWM--------------GNSYFLLKDYKSCVSS 189 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 ++ + Y D E M E + L A+ + L+ ++P + + Sbjct: 190 YESLAGKYPDHPRVAETMLNTAECQLGLRNKTAAKRTLKLLISKFPGSDASDKAKK 245 >gi|215485764|ref|YP_002328195.1| tol-pal system protein YbgF [Escherichia coli O127:H6 str. E2348/69] gi|312965178|ref|ZP_07779415.1| tol-pal system protein YbgF [Escherichia coli 2362-75] gi|215263836|emb|CAS08174.1| predicted protein [Escherichia coli O127:H6 str. E2348/69] gi|312290269|gb|EFR18152.1| tol-pal system protein YbgF [Escherichia coli 2362-75] Length = 263 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F +++P + + + Y+ GK AA Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ T +++ +Y + K A+ Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 180 FYVTVG 185 + Sbjct: 258 KRLNAM 263 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|91209777|ref|YP_539763.1| tol-pal system protein YbgF [Escherichia coli UTI89] gi|110640950|ref|YP_668678.1| tol-pal system protein YbgF [Escherichia coli 536] gi|117622933|ref|YP_851846.1| hypothetical protein APECO1_1339 [Escherichia coli APEC O1] gi|218557655|ref|YP_002390568.1| tol-pal system protein YbgF [Escherichia coli S88] gi|227884291|ref|ZP_04002096.1| tol-pal system protein YbgF [Escherichia coli 83972] gi|237707295|ref|ZP_04537776.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|300992343|ref|ZP_07179866.1| tol-pal system protein YbgF [Escherichia coli MS 200-1] gi|300993168|ref|ZP_07180251.1| tol-pal system protein YbgF [Escherichia coli MS 45-1] gi|301051338|ref|ZP_07198161.1| tol-pal system protein YbgF [Escherichia coli MS 185-1] gi|331682172|ref|ZP_08382794.1| putative tol-pal system protein YbgF [Escherichia coli H299] gi|91071351|gb|ABE06232.1| hypothetical protein UTI89_C0739 [Escherichia coli UTI89] gi|110342542|gb|ABG68779.1| putative exported protein [Escherichia coli 536] gi|115512057|gb|ABJ00132.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|218364424|emb|CAR02104.1| putative RNA binding protein [Escherichia coli S88] gi|226898505|gb|EEH84764.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|227839043|gb|EEJ49509.1| tol-pal system protein YbgF [Escherichia coli 83972] gi|294493984|gb|ADE92740.1| tol-pal system protein YbgF [Escherichia coli IHE3034] gi|300297000|gb|EFJ53385.1| tol-pal system protein YbgF [Escherichia coli MS 185-1] gi|300305360|gb|EFJ59880.1| tol-pal system protein YbgF [Escherichia coli MS 200-1] gi|300406698|gb|EFJ90236.1| tol-pal system protein YbgF [Escherichia coli MS 45-1] gi|307552593|gb|ADN45368.1| tol-pal system protein YbgF [Escherichia coli ABU 83972] gi|315292656|gb|EFU52008.1| tol-pal system protein YbgF [Escherichia coli MS 153-1] gi|323191087|gb|EFZ76352.1| tol-pal system protein YbgF [Escherichia coli RN587/1] gi|323953132|gb|EGB48999.1| tol-pal system protein YbgF [Escherichia coli H252] gi|323958486|gb|EGB54192.1| tol-pal system protein YbgF [Escherichia coli H263] gi|331080596|gb|EGI51772.1| putative tol-pal system protein YbgF [Escherichia coli H299] Length = 263 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F +++P + + + Y+ GK AA Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ T +++ +Y + K A+ Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 180 FYVTVG 185 + Sbjct: 258 KRLNAM 263 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|171058625|ref|YP_001790974.1| tol-pal system protein YbgF [Leptothrix cholodnii SP-6] gi|170776070|gb|ACB34209.1| tol-pal system protein YbgF [Leptothrix cholodnii SP-6] Length = 283 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 48/137 (35%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T +++ Y+ A+ L++ F+KA E R FP + QY G+ Sbjct: 155 EATVDAGEKKAYDDAIGILRKGEFAKAAEALQGFQRRFPSSPYNGHVQYWLGNAQYGKGE 214 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 ++AA ++ P+ + + + + K + + +V+ Y Sbjct: 215 VKEAAQTFRTLVSNAPDHP--------RAAEALLALANCQVELKDPKAARKSLDELVKNY 266 Query: 170 TNSPYVKGARFYVTVGR 186 S + R + + Sbjct: 267 PQSEAAQAGRERLAKLK 283 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 43/130 (33%), Gaps = 22/130 (16%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 G++ +AA + + ++P S +V Y +G + K Q + Sbjct: 174 RKGEFAKAAEALQGFQRRFPSSPYNGHVQYWLGNAQYGK--------GEVKEAAQTFRTL 225 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V + P A + + +L + AA ++ NY +E Sbjct: 226 VSNAPDHPRAAEALLALANCQVEL--------------KDPKAARKSLDELVKNYPQSEA 271 Query: 226 AEEAMARLVE 235 A+ RL + Sbjct: 272 AQAGRERLAK 281 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 40/105 (38%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + R+ +SPY ++++ + +GE A F+ + Sbjct: 180 KAAEALQGFQRRFPSSPYNGHVQYWLGNAQ--------------YGKGEVKEAAQTFRTL 225 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 ++N D A EA+ L V L AR+ + + + YPQ Sbjct: 226 VSNAPDHPRAAEALLALANCQVELKDPKAARKSLDELVKNYPQSE 270 >gi|158520052|ref|YP_001527922.1| SpoIID/LytB domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158508878|gb|ABW65845.1| SpoIID/LytB domain [Desulfococcus oleovorans Hxd3] Length = 508 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 42/114 (36%), Gaps = 9/114 (7%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS-AGKYQQAASLGE 118 ++ +A + + +A + + P AG ++LL+ + ++ +A + Sbjct: 20 LFAQAETQVAAGRYLEAIGLYQTVADTTPDAGEKARALLLVGYAHAQYLDQHDKALLYFD 79 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 +T +P S + Y GM + R Q + ERY ++ Sbjct: 80 YILTNWPGSAAAEEALYRKGMVLYETERYA--------KAYQAFTAYQERYPHT 125 >gi|225076465|ref|ZP_03719664.1| hypothetical protein NEIFLAOT_01511 [Neisseria flavescens NRL30031/H210] gi|224952144|gb|EEG33353.1| hypothetical protein NEIFLAOT_01511 [Neisseria flavescens NRL30031/H210] Length = 251 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 49/132 (37%), Gaps = 13/132 (9%) Query: 50 SVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 S TD Q E+ Y +A + + NFS A + + +AR+++ + Q Sbjct: 123 SETDSAAQNELRLYNQAQKYYQRNNFSAAVAILKEADGGN-GSEIARRNMYLLLQSQQRL 181 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIV 166 G + +G Y ++ S Y +G + +D+ +++ Sbjct: 182 GNCESVIEIGNRYANRFRNSPQAPDAMYSIGQCQYKLQQKDIAR---------STWRKLI 232 Query: 167 ERYTNSPYVKGA 178 + + NS K A Sbjct: 233 QSFPNSEAAKRA 244 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 19/150 (12%), Positives = 42/150 (28%), Gaps = 48/150 (32%) Query: 170 TNSPYVKGARFYVTVG---------RNQLAAKEVEI---GRYYLKRGEYVAA-------- 209 + + + + + A E+ + + Y +R + AA Sbjct: 100 PQAQRLDDRKLKMNYLANGGSVLSETDSAAQNELRLYNQAQKYYQRNNFSAAVAILKEAD 159 Query: 210 ------IPR---------------FQLVLA-------NYSDAEHAEEAMARLVEAYVALA 241 I R + V+ + ++ A +AM + + L Sbjct: 160 GGNGSEIARRNMYLLLQSQQRLGNCESVIEIGNRYANRFRNSPQAPDAMYSIGQCQYKLQ 219 Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271 D AR + + +P A+ +K Sbjct: 220 QKDIARSTWRKLIQSFPNSEAAKRASISIK 249 >gi|108757885|ref|YP_630166.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622] gi|108461765|gb|ABF86950.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622] Length = 1111 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 71/224 (31%), Gaps = 35/224 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ A + E + +A + + + P A K+L +A + ++ A L E Sbjct: 689 FKLADQLMAESKYEEAAAKYIELVDESPRHEFADKALNNAAVAHENTRRFDSALKLYERI 748 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP------- 173 +YP S + V + +D + ++V+ Y +S Sbjct: 749 YREYPSSPLAGGALFRVAV---NAENSYDFD-----KAVVSYQKLVKDYPDSKDREAALF 800 Query: 174 -----------YVKGARFYVTVG-----RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 Y + A ++ + Y K+G + Q + Sbjct: 801 NAARLLEGQQRYPEAAAAFMRYADLFPKAEDAPKNQYRAAIIYEKQGNPRGEVRALQEFV 860 Query: 218 ANY-SDAEHAE---EAMARLVEAYVALALMDEAREVVSLIQERY 257 + S + E +A R+ +A+ L +A+ + + Sbjct: 861 RKFASQSGQVELVVDAHRRMGDAHQKLGSTRDAQNAWARSAAEF 904 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 52/134 (38%), Gaps = 12/134 (8%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ AV +F KA + + +D+P + +L +A + +Y +AA+ Sbjct: 762 LFRVAVNAENSYDFDKAVVSYQKLVKDYPDSKDREAALFNAARLLEGQQRYPEAAAAFMR 821 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY-TNS---PYV 175 Y +P++++ Y + Y + Q + ++ + V ++ + S V Sbjct: 822 YADLFPKAEDAPKNQYRAAIIYEK--------QGNPRGEVRALQEFVRKFASQSGQVELV 873 Query: 176 KGARFYVTVGRNQL 189 A + +L Sbjct: 874 VDAHRRMGDAHQKL 887 Score = 42.4 bits (99), Expect = 0.071, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 51/208 (24%), Gaps = 58/208 (27%) Query: 75 KAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYS--AGKYQQAASLGEEYITQY------- 124 A F + R +P + A + Y + + A E + + Sbjct: 101 DAIARFEEFLRRYPTEPRFTPDVMFRLAELYYERSSDDHLLAMKDYAERLEAHDKNPDAE 160 Query: 125 -PESKNVDYV----YYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERY 169 P VDY Y ++ R Q L +++ RY Sbjct: 161 FPTEPRVDYAPSIALYRKLLATFPDYRLNDGAWYLLAYCLEKQDQYGDSLHAYQQLIARY 220 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-----------GEYVAAIPRFQLVLA 218 S + + IG Y+ Y AA Sbjct: 221 PQSRFATESWVR--------------IGEYWFDNYEDPQALPKAAQAYEAATRDASH--- 263 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEA 246 ++A+ +L Y L + A Sbjct: 264 -----PLYDKALYKLGWTYYRLDRFEPA 286 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 54/201 (26%), Gaps = 28/201 (13%) Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG--------- 138 P A +A + YS + +A E I YP + Y L Sbjct: 594 PAGEKAPGIAYQAAELHYSHDDFPEARRRFETIIQAYPSHEVARYATNLTIETFLIDEDW 653 Query: 139 ---------MSYAQMIRDVPYD---QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 ++ + D D Q + + S Y + A Sbjct: 654 RSVESVSARLASNDKVIDPSSDLHKQLVKFKLAGRFKLADQLMAESKY-EEAAAKYIELV 712 Query: 187 NQLAAKEV------EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 ++ E + + +A+ ++ + Y + A A+ R+ Sbjct: 713 DESPRHEFADKALNNAAVAHENTRRFDSALKLYERIYREYPSSPLAGGALFRVAVNAENS 772 Query: 241 ALMDEAREVVSLIQERYPQGY 261 D+A + + YP Sbjct: 773 YDFDKAVVSYQKLVKDYPDSK 793 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 74/235 (31%), Gaps = 48/235 (20%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA-SLGEEYI--TQYP 125 K+ + + + Q +P + A +S + + + QA + Y T+ Sbjct: 202 KQDQYGDSLHAYQQLIARYPQSRFATESWVRIGEYWFDNYEDPQALPKAAQAYEAATRDA 261 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK-GA------ 178 D Y +G +Y ++ R + + +VE Y K A Sbjct: 262 SHPLYDKALYKLGWTYYRLDR--------FEPAVASFLTLVEFYEAQRVAKGDATAGGDL 313 Query: 179 -RFYVTVGRNQLAA--------------------KEVEI----GRYYLKRGEYVAAIPRF 213 + LA E E+ G Y + ++ AI + Sbjct: 314 REEALQYVAISLADDTWGGIARADALFAERGPRPYEAEVYQRLGNVYFDQTKHAPAIEAY 373 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVA---LALMDEAREVVSLIQERYPQGYWARY 265 + VL DA A R+V+AY L L E ++ + + P G W Sbjct: 374 RRVLQKAPDAPDAPMVQQRIVQAYERDRMLGLSFAESEALANLYQ--PGGAWYEK 426 Score = 35.9 bits (82), Expect = 6.2, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 50/151 (33%), Gaps = 20/151 (13%) Query: 137 VGMSYAQMIRDVPYDQRATK-LMLQYMSRIVERYTNSP-YVKGARFYVTVGR-------N 187 + SY + I+D+ +R + + + RY P + F + + Sbjct: 80 LAASYEKRIKDLEAQERRERLDAIARFEEFLRRYPTEPRFTPDVMFRLAELYYERSSDDH 139 Query: 188 QLAAKEVEI----------GRYYLK-RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 LA K+ + + R +Y +I ++ +LA + D + A L Sbjct: 140 LLAMKDYAERLEAHDKNPDAEFPTEPRVDYAPSIALYRKLLATFPDYRLNDGAWYLLAYC 199 Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVE 267 ++ + RYPQ +A Sbjct: 200 LEKQDQYGDSLHAYQQLIARYPQSRFATESW 230 >gi|218704069|ref|YP_002411588.1| tol-pal system protein YbgF [Escherichia coli UMN026] gi|293403997|ref|ZP_06647991.1| hypothetical protein ECGG_02377 [Escherichia coli FVEC1412] gi|298379777|ref|ZP_06989382.1| hypothetical protein ECFG_02574 [Escherichia coli FVEC1302] gi|300900749|ref|ZP_07118898.1| tol-pal system protein YbgF [Escherichia coli MS 198-1] gi|218431166|emb|CAR12042.1| putative RNA binding protein [Escherichia coli UMN026] gi|291428583|gb|EFF01608.1| hypothetical protein ECGG_02377 [Escherichia coli FVEC1412] gi|298279475|gb|EFI20983.1| hypothetical protein ECFG_02574 [Escherichia coli FVEC1302] gi|300355808|gb|EFJ71678.1| tol-pal system protein YbgF [Escherichia coli MS 198-1] Length = 263 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F +++P Sbjct: 116 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|218699114|ref|YP_002406743.1| tol-pal system protein YbgF [Escherichia coli IAI39] gi|293409126|ref|ZP_06652702.1| conserved hypothetical protein [Escherichia coli B354] gi|293414027|ref|ZP_06656676.1| hypothetical protein ECDG_00576 [Escherichia coli B185] gi|331651750|ref|ZP_08352769.1| putative tol-pal system protein YbgF [Escherichia coli M718] gi|218369100|emb|CAR16854.1| putative RNA binding protein [Escherichia coli IAI39] gi|291434085|gb|EFF07058.1| hypothetical protein ECDG_00576 [Escherichia coli B185] gi|291469594|gb|EFF12078.1| conserved hypothetical protein [Escherichia coli B354] gi|331050028|gb|EGI22086.1| putative tol-pal system protein YbgF [Escherichia coli M718] Length = 263 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F +++P Sbjct: 116 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|82543169|ref|YP_407116.1| tol-pal system protein YbgF [Shigella boydii Sb227] gi|81244580|gb|ABB65288.1| conserved hypothetical protein [Shigella boydii Sb227] gi|332760889|gb|EGJ91177.1| tol-pal system protein YbgF [Shigella flexneri 4343-70] gi|333007800|gb|EGK27276.1| tol-pal system protein YbgF [Shigella flexneri K-218] Length = 263 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F +++P Sbjct: 116 SGATASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|224537598|ref|ZP_03678137.1| hypothetical protein BACCELL_02478 [Bacteroides cellulosilyticus DSM 14838] gi|224520795|gb|EEF89900.1| hypothetical protein BACCELL_02478 [Bacteroides cellulosilyticus DSM 14838] Length = 1010 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 34/73 (46%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +YEK +++ N +A F + +P + V+RK+ + Y +Y +A Sbjct: 629 NALYEKGRSYVQTSNSRQAIAAFKELLDKYPESPVSRKAAAEIGLLYYQNDEYDRAIDAY 688 Query: 118 EEYITQYPESKNV 130 + +TQYP S+ Sbjct: 689 KHVVTQYPGSEEA 701 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 77/221 (34%), Gaps = 28/221 (12%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYE---YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 Y Y A + E++++ A F Q + +A + A ++ Sbjct: 514 ETYALAYYNLAYIAFHEKDYTLAQNRFLKFTQLEKGENPTALA-DAYNRIGDCYLHARRF 572 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +A + + DY +Y + + V Q+ + ++R+ +Y Sbjct: 573 DEAKQYYTKAENM--GTPAGDYSFYQLAL--------VAGLQKDYDGKVALLNRMANKYP 622 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 +SPY N L K GR Y++ AI F+ +L Y ++ + +A Sbjct: 623 SSPYT----------INALYEK----GRSYVQTSNSRQAIAAFKELLDKYPESPVSRKAA 668 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 A + Y D A + + +YP AR +K Sbjct: 669 AEIGLLYYQNDEYDRAIDAYKHVVTQYPGSEEARLAMRDLK 709 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 36/282 (12%), Positives = 78/282 (27%), Gaps = 73/282 (25%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAY---------------------------------- 77 ++ + +Y++ +++ ++ A Sbjct: 26 ENITSPQRLYQEGQSLFQQKAYAAAIPPLQAFVRQIDAEGKPLPVAGERMEAEYMLVCAA 85 Query: 78 ------EYFNQCS---RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 + ++ ++P A + + A V + GKY +A ++ ++ Sbjct: 86 YELKDLKSLDKLQAYLDEYPDTPYANRIYALMASVYFFEGKYDEAMAMFNSARLDLLGNE 145 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 D + Y + Y + K + + R T+ Y +Y++ R Sbjct: 146 ERDDMTYRLATCYLKT--------GNVKEAAIWFETL--RSTSKKYAADCTYYISYIRYT 195 Query: 189 LAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + I YL + Y A Q L+ Y + E+ E Sbjct: 196 QQRYDEAMTGFLSLQDNAKYKALAPYYIAEIYLIKKNYDKAEIVAQNYLSAYPNNEYTAE 255 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 L +A EA E E + R ++ Sbjct: 256 MYRVLGDADYHFGKYHEAMEAFEKYLENNKEAAPRRDALYML 297 Score = 40.1 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 63/190 (33%), Gaps = 27/190 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A +LK N +A +F A ++++Y+ +Y +A + + Sbjct: 152 YRLATCYLKTGNVKEAAIWFETLRST--SKKYAADCTYYISYIRYTQQRYDEAMTG---F 206 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 ++ N Y ++ I ++ ++ + Y N+ Y Sbjct: 207 LSL---QDNAKY----KALAPY-YIAEIYLIKKNYDKAEIVAQNYLSAYPNNEYTAEMYR 258 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + Y+ G+Y A+ F+ L N +A +A+ L +Y Sbjct: 259 VLGD------------ADYHF--GKYHEAMEAFEKYLENNKEAAPRRDALYMLGLSYYNC 304 Query: 241 ALMDEAREVV 250 + +A + Sbjct: 305 GVYSKAANTL 314 Score = 35.9 bits (82), Expect = 6.8, Method: Composition-based stats. Identities = 19/173 (10%), Positives = 48/173 (27%), Gaps = 22/173 (12%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++ + +Y + + +SKA + + + +A+ + L Sbjct: 278 EKYLENNKEAAPRRDALYMLGLSYYNCGVYSKAANTLGEVTAEN--DALAQNAYLHMGLA 335 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 +A E+ + + + Y + + A + Sbjct: 336 YLQMSDKNKARMAFEQAAASNADMQVKEQAAYNYALCIHETSYS------AFGESVTVFE 389 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + + NS YV Y+ Y+ Y AA+ + + Sbjct: 390 KFLNEFPNSQYVDKVSSYLVEV--------------YMNTRSYEAALKSIERI 428 Score = 35.5 bits (81), Expect = 9.2, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 67/215 (31%), Gaps = 34/215 (15%) Query: 50 SVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D Y +E + +A + + F +A + Q + + Sbjct: 805 EYPDNPYSQEALIARAEILFNRKQFDQALNDYRQLKAKATTPERRQLAETGMLRSAALMQ 864 Query: 109 KYQQAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + + + + PE +N Y +Y QRA K + + + Sbjct: 865 DDVETIAAATDLLAETKLTPELRN--EALYFRAKAYLN--------QRADKKAMNDLQTL 914 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 + T + Y A+ + + K GEY AA + H Sbjct: 915 AKD-TRTLYGAEAK--------------YLVAQQLYKAGEYTAAEKEILNFID--QSTPH 957 Query: 226 AE---EAMARLVEAYVALALMDEAREVVSLIQERY 257 A + L + YVA+ +AR+ + +Q+ Y Sbjct: 958 AYWLARSFVLLSDVYVAMDKKLDARQYLLSLQQNY 992 >gi|82776020|ref|YP_402367.1| tol-pal system protein YbgF [Shigella dysenteriae Sd197] gi|309786421|ref|ZP_07681047.1| tol-pal system protein YbgF [Shigella dysenteriae 1617] gi|81240168|gb|ABB60878.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gi|308925815|gb|EFP71296.1| tol-pal system protein YbgF [Shigella dysenteriae 1617] Length = 263 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F +++P Sbjct: 116 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ G Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 187 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 188 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|15800458|ref|NP_286470.1| tol-pal system protein YbgF [Escherichia coli O157:H7 EDL933] gi|15830031|ref|NP_308804.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. Sakai] gi|168759043|ref|ZP_02784050.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4401] gi|168767194|ref|ZP_02792201.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4486] gi|168779237|ref|ZP_02804244.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4076] gi|168786908|ref|ZP_02811915.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC869] gi|195936737|ref|ZP_03082119.1| hypothetical protein EscherichcoliO157_09785 [Escherichia coli O157:H7 str. EC4024] gi|208808005|ref|ZP_03250342.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4206] gi|208816398|ref|ZP_03257577.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4045] gi|208822278|ref|ZP_03262597.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4042] gi|209395711|ref|YP_002269376.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4115] gi|217325865|ref|ZP_03441949.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. TW14588] gi|254791899|ref|YP_003076736.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. TW14359] gi|261224453|ref|ZP_05938734.1| SecB-dependent secretory protein [Escherichia coli O157:H7 str. FRIK2000] gi|261254555|ref|ZP_05947088.1| SecB-dependent secretory protein [Escherichia coli O157:H7 str. FRIK966] gi|291281685|ref|YP_003498503.1| Tol-pal system protein YbgF [Escherichia coli O55:H7 str. CB9615] gi|12513675|gb|AAG55078.1|AE005252_14 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|13360236|dbj|BAB34200.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|189003102|gb|EDU72088.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4076] gi|189354291|gb|EDU72710.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4401] gi|189363451|gb|EDU81870.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4486] gi|189373185|gb|EDU91601.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC869] gi|208727806|gb|EDZ77407.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4206] gi|208733046|gb|EDZ81734.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4045] gi|208737763|gb|EDZ85446.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4042] gi|209157111|gb|ACI34544.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4115] gi|209776368|gb|ACI86496.1| hypothetical protein ECs0777 [Escherichia coli] gi|209776370|gb|ACI86497.1| hypothetical protein ECs0777 [Escherichia coli] gi|209776372|gb|ACI86498.1| hypothetical protein ECs0777 [Escherichia coli] gi|209776374|gb|ACI86499.1| hypothetical protein ECs0777 [Escherichia coli] gi|209776376|gb|ACI86500.1| hypothetical protein ECs0777 [Escherichia coli] gi|217322086|gb|EEC30510.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. TW14588] gi|254591299|gb|ACT70660.1| SecB-dependent secretory protein [Escherichia coli O157:H7 str. TW14359] gi|290761558|gb|ADD55519.1| Tol-pal system protein YbgF [Escherichia coli O55:H7 str. CB9615] gi|320193147|gb|EFW67787.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC1212] gi|320638000|gb|EFX07769.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. G5101] gi|320643396|gb|EFX12576.1| tol-pal system protein YbgF [Escherichia coli O157:H- str. 493-89] gi|320648690|gb|EFX17326.1| tol-pal system protein YbgF [Escherichia coli O157:H- str. H 2687] gi|320654328|gb|EFX22381.1| tol-pal system protein YbgF [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659960|gb|EFX27502.1| tol-pal system protein YbgF [Escherichia coli O55:H7 str. USDA 5905] gi|320664786|gb|EFX31924.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. LSU-61] gi|326341509|gb|EGD65299.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. 1044] gi|326345728|gb|EGD69467.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. 1125] Length = 263 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F +++P Sbjct: 116 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ G Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 187 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 188 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|323976277|gb|EGB71367.1| tol-pal system protein YbgF [Escherichia coli TW10509] Length = 263 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F +++P Sbjct: 116 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ G Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 187 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 188 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|297568869|ref|YP_003690213.1| tol-pal system protein YbgF [Desulfurivibrio alkaliphilus AHT2] gi|296924784|gb|ADH85594.1| tol-pal system protein YbgF [Desulfurivibrio alkaliphilus AHT2] Length = 357 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 18/129 (13%), Positives = 43/129 (33%), Gaps = 8/129 (6%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + Y + + L+ N+ +AY F + + P A + + +Y+ A Sbjct: 237 DDYYSQGLRQLERNNYREAYTAFARYLEEEPRGENAADARFRLGESLFGQQEYELAILEY 296 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 ++ I + V G+++ ++ R R++ + N + Sbjct: 297 QKVIADFSGHDRVPAAMLRQGVAFEEL--------REPATAAIIYERLIGEFPNRREAQQ 348 Query: 178 ARFYVTVGR 186 AR + Sbjct: 349 ARERLEKIN 357 >gi|17986624|ref|NP_539258.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M] gi|17982238|gb|AAL51522.1| tpr repeat containing exported protein [Brucella melitensis bv. 1 str. 16M] Length = 194 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + S+ +Y+ A +L ++ A F + + +P + ++ Sbjct: 58 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 117 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G+Y +AA+L + YP+SK + +GM+ +M + ++ Sbjct: 118 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 169 Query: 165 IVERYTN 171 I +RY Sbjct: 170 IPQRYPK 176 Score = 42.4 bits (99), Expect = 0.069, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SL +A+ +G Y+ A + E++ +YP + +G S R Sbjct: 72 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 124 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y +S F + + ++ +V + Sbjct: 125 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 167 Score = 37.8 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY P ARF++ +G Y A Sbjct: 84 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 129 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F +Y D++ A E M +L A + D A + I +RYP+ Sbjct: 130 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 176 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 23/68 (33%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + YL G+Y AA F+ + Y EA L E+ EA + Sbjct: 74 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 133 Query: 254 QERYPQGY 261 Q YP Sbjct: 134 QRDYPDSK 141 >gi|300957691|ref|ZP_07169880.1| tol-pal system protein YbgF [Escherichia coli MS 175-1] gi|300315609|gb|EFJ65393.1| tol-pal system protein YbgF [Escherichia coli MS 175-1] Length = 263 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F +++P + + + Y+ GK AA Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ T +++ +Y + K A+ Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 180 FYVTVG 185 + Sbjct: 258 KRLNAM 263 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|16128717|ref|NP_415270.1| periplasmic TolA-binding protein [Escherichia coli str. K-12 substr. MG1655] gi|89107600|ref|AP_001380.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110] gi|170080409|ref|YP_001729729.1| hypothetical protein ECDH10B_0809 [Escherichia coli str. K-12 substr. DH10B] gi|238900007|ref|YP_002925803.1| hypothetical protein BWG_0601 [Escherichia coli BW2952] gi|256023655|ref|ZP_05437520.1| tol-pal system protein YbgF [Escherichia sp. 4_1_40B] gi|300947177|ref|ZP_07161387.1| tol-pal system protein YbgF [Escherichia coli MS 116-1] gi|301648047|ref|ZP_07247814.1| tol-pal system protein YbgF [Escherichia coli MS 146-1] gi|307137355|ref|ZP_07496711.1| tol-pal system protein YbgF [Escherichia coli H736] gi|331641243|ref|ZP_08342378.1| putative tol-pal system protein YbgF [Escherichia coli H736] gi|2506623|sp|P45955|YBGF_ECOLI RecName: Full=Uncharacterized protein YbgF; Flags: Precursor gi|1786963|gb|AAC73836.1| periplasmic TolA-binding protein [Escherichia coli str. K-12 substr. MG1655] gi|4062322|dbj|BAA35408.1| hypothetical protein [Escherichia coli str. K12 substr. W3110] gi|169888244|gb|ACB01951.1| predicted protein [Escherichia coli str. K-12 substr. DH10B] gi|238862957|gb|ACR64955.1| predicted protein [Escherichia coli BW2952] gi|260450104|gb|ACX40526.1| tol-pal system protein YbgF [Escherichia coli DH1] gi|300453163|gb|EFK16783.1| tol-pal system protein YbgF [Escherichia coli MS 116-1] gi|301073873|gb|EFK88679.1| tol-pal system protein YbgF [Escherichia coli MS 146-1] gi|315135399|dbj|BAJ42558.1| tol-pal system protein YbgF [Escherichia coli DH1] gi|315614618|gb|EFU95260.1| tol-pal system protein YbgF [Escherichia coli 3431] gi|323942965|gb|EGB39129.1| tol-pal system protein YbgF [Escherichia coli E482] gi|323972029|gb|EGB67249.1| tol-pal system protein YbgF [Escherichia coli TA007] gi|331038041|gb|EGI10261.1| putative tol-pal system protein YbgF [Escherichia coli H736] Length = 263 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F +++P + + + Y+ GK AA Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ T +++ +Y + K A+ Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 180 FYVTVG 185 + Sbjct: 258 KRLNAM 263 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|21226280|ref|NP_632202.1| hypothetical protein MM_0178 [Methanosarcina mazei Go1] gi|20904523|gb|AAM29874.1| conserved protein [Methanosarcina mazei Go1] Length = 1711 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 65/202 (32%), Gaps = 24/202 (11%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 + L + +RD + + + + +Y +AV K NF A + + P Sbjct: 1356 GLALLSLCRYEEARDAFSSVLEESPENADVLYNRAVASFKTLNFEDAAKDLEKVLLFAPD 1415 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + ++ M Y++A + + PE + Y + + + Sbjct: 1416 SPDYTEACYMLGIASIELQDYERALQALDMVLEWEPEHEE---ALYNMALVLFNL----- 1467 Query: 150 YDQRATKLMLQYMSRIVERYTNSP----YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 + + +++E P Y+ + + L A E + + K E Sbjct: 1468 ---EEYEEAARTFEQLLETSPEDPESLNYLGLCLLELDNLKEALKAFE-KAALFNPKNEE 1523 Query: 206 --YVAA-----IPRFQLVLANY 220 Y AA + R Q L + Sbjct: 1524 ALYNAATTLIKLNRAQESLGYF 1545 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 80/221 (36%), Gaps = 40/221 (18%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-RKSLLMSAFVQYSAGKYQQAASLGEE 119 Y K ++ K + + A E F+ +R+ P A + L+ A GK A E+ Sbjct: 68 YAKGLVLAKLEKYDSALECFDSLTRENPRNENALEQKCLLLA----KIGKKDLALEALED 123 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--KG 177 ++ +YP ++ Y G+ +++ R + + S++++ + + Sbjct: 124 FLKKYPANEA---ALYHKGILLSELSR--------YEEAEKIFSKVLKLDPENREAWFRK 172 Query: 178 ARFYVTVGRNQLAAKEVEIG-----RYY----------LKRGEYVAAIPRFQLVLANYSD 222 V + R A K E Y+ +K Y A+ F +L Y D Sbjct: 173 GFALVQLLRLNEAIKAFEEAIKIDPSYFEAWNCRCFALMKLEVYEEALEAFDSMLRIYPD 232 Query: 223 AE--HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + A+A L L EA + + + E P+ Sbjct: 233 VKDIWYSRALALL-----KLQNYAEAVQSFARVTELDPENK 268 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 81/252 (32%), Gaps = 68/252 (26%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPF--------AGVARKSLLMSAFVQYSAGKYQQ 112 Y V + + KA E F + + + P+ +A + G Y+ Sbjct: 510 YSLGVALTELGEYEKALETFEKLASENPYDLEIQCRRGKLAMEV-----------GNYET 558 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKL----------- 157 A E +T+ P S+ +Y G++ ++ +D ATK Sbjct: 559 ALQAFERILTEKPASRE---AWYRKGLALLKLENFEEAVKAFDAVATKDADYEDAGVLKG 615 Query: 158 -----------MLQYMSRIVERYTNSPYVKGARFYVTVG--RNQLAAKEVEIGR-----Y 199 L+ R++E+ +S R + R + AAK E Sbjct: 616 FAQMKLKECASALETFERVLEKKPDSDTAWYYRGMILYTLQRQEEAAKAFESASRLNPGL 675 Query: 200 Y----------LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 Y + G+Y AA F+ VL + A+ + L EA + Sbjct: 676 YTAFEYRAKCLFETGQYEAAFEAFEAVLEKDPE---NLSALEKRAICLFELKKNKEAVDA 732 Query: 250 VSLIQERYPQGY 261 +S + E P+ Sbjct: 733 LSTLLESDPERK 744 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 54/144 (37%), Gaps = 19/144 (13%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + +Y V+ K++ + A F + P +SL G+Y++ Sbjct: 1586 DPENIKAIYNVGVVCFKQKLYETAARAFKEALSINP---WHEQSLRYLGISLAKIGEYEE 1642 Query: 113 AASLGEEYITQYPES-KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A E+ + P+ ++++Y G+ ++ R ++ I+ Y + Sbjct: 1643 ALKAFEKLLRINPQDVQSMNY----RGVILGKLER--------FGEAIRAFDEILRIYPD 1690 Query: 172 SPYVKGARFYVTVGRNQLAAKEVE 195 + AR + V ++ +E+ Sbjct: 1691 ---MADAREKLEVLKSLENDEELY 1711 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 75/218 (34%), Gaps = 33/218 (15%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 L+ D+R +E +K + L + +A + F+ + + L A + Sbjct: 1342 LEIKPDLRAAQE--QKGLALLSLCRYEEARDAFSSVLEE---SPENADVLYNRAVASFKT 1396 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 ++ AA E+ + P+S + Y++G++ ++ + + LQ + ++E Sbjct: 1397 LNFEDAAKDLEKVLLFAPDSPDYTEACYMLGIASIEL--------QDYERALQALDMVLE 1448 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 A + + + EY A F+ +L + Sbjct: 1449 WEPEHE---EALYNMALVL--------------FNLEEYEEAARTFEQLLE---TSPEDP 1488 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 E++ L + L + EA + P+ A Y Sbjct: 1489 ESLNYLGLCLLELDNLKEALKAFEKAALFNPKNEEALY 1526 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 75/238 (31%), Gaps = 45/238 (18%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 +Q+ D + + + + + + LK + A + F + P M Sbjct: 1264 KQAVPDGEESKIGEPELEDALTKIGLSQLKTGKYEDACDTFEKVLEKNP----------M 1313 Query: 100 SAFVQYSAG-------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 +A + Y +G + + A + P+ + G++ + R Sbjct: 1314 AADIWYLSGLVMRGLDQNEDAVEAFNRALEIKPDLRA---AQEQKGLALLSLCR------ 1364 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + S ++E + V N+ + + K + A Sbjct: 1365 --YEEARDAFSSVLEESPENA---------DVLYNR------AVASF--KTLNFEDAAKD 1405 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + VL D+ EA L A + L + A + + ++ E P+ A Y LV Sbjct: 1406 LEKVLLFAPDSPDYTEACYMLGIASIELQDYERALQALDMVLEWEPEHEEALYNMALV 1463 Score = 39.7 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 15/117 (12%), Positives = 41/117 (35%), Gaps = 18/117 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + K ++ ++A + F + + P F + F Y++A + Sbjct: 170 FRKGFALVQLLRLNEAIKAFEEAIKIDPSYFEAWNCRC-----FALMKLEVYEEALEAFD 224 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + YP+ K++ +Y ++ ++ + +Q +R+ E + Sbjct: 225 SMLRIYPDVKDI---WYSRALALLKL--------QNYAEAVQSFARVTELDPENKDA 270 Score = 39.3 bits (91), Expect = 0.56, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 65/219 (29%), Gaps = 44/219 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119 +K ++ L A + F +R P + F YS +Y++A +E Sbjct: 341 QKGLILLDTGKLEPAIDAFENAARLNPDNETCW-----MNMGFALYSLERYEEALEAFKE 395 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P ++ + G+ ++ T L+ ++ + R Sbjct: 396 GLRLNP---YLETGWNRKGIVLGKL--------GKTGEALEAFEEAIKLRPDFEDAWKNR 444 Query: 180 FYVTVGRNQLAAKEVEIGRY-----------Y------LKRGEYVAAIPRFQLVLA---N 219 + + E Y LK G A+ + V++ + Sbjct: 445 GLLLFASEECEKAEEAFAEVLKINPEDIDSLYNRGISLLKLGRKETALEYLEKVVSLRPD 504 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 Y D ++ L A L ++A E + P Sbjct: 505 YPDLSYS------LGVALTELGEYEKALETFEKLASENP 537 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 88/228 (38%), Gaps = 37/228 (16%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 + + +Y + + +Y K ++F++++ + KA E F + P Sbjct: 779 EKAEGIYEKTRDPQKPNSVLYWKGLVFIRQEAYEKAVEAFKGITDQDP----------NF 828 Query: 101 AFVQY-------SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 A Y G+Y++A+ ++ + ++ + Y +G+S ++ Sbjct: 829 AEGWYFTGLSCSKLGRYEEASEAFKKALEINSALRDTHDICYQLGISNFEL--------G 880 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 + L+ + + + + + + + K + + L+ G Y A F Sbjct: 881 KFEEALKAFEKAFKTTPDREQITETTY-----TDLIYMKSLSL----LRLGRYKEAEVGF 931 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + V+ + D+++A EA+A L A +EA E+ + + P+ Sbjct: 932 KEVI--FRDSDNA-EALAHLSTACFKQEHYEEALEIFEKVLSQTPERK 976 Score = 35.1 bits (80), Expect = 9.9, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 72/213 (33%), Gaps = 34/213 (15%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 L +E+ + +T+ Y +Y K++ L+ + +A F + + A Sbjct: 885 ALKAFEKAFKTTPDREQITETTYTDLIYMKSLSLLRLGRYKEAEVGFKEVIFRD--SDNA 942 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 +L + + Y++A + E+ ++Q PE K V + G++ + Sbjct: 943 E-ALAHLSTACFKQEHYEEALEIFEKVLSQTPERKT---VLFRKGVALKAL--------G 990 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 + L +++ + Y R Y A E+ G Y A F Sbjct: 991 KIQDSLDIFDLVLKLKPDCSYALEQRGY--------ALFEL---------GRYGEAAEAF 1033 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 + L + + + A+ + EA Sbjct: 1034 KEALEYCPNKTYMQ---YLKGLAFFRIGNFTEA 1063 >gi|87310532|ref|ZP_01092661.1| hypothetical protein DSM3645_07695 [Blastopirellula marina DSM 3645] gi|87286753|gb|EAQ78658.1| hypothetical protein DSM3645_07695 [Blastopirellula marina DSM 3645] Length = 390 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 67/172 (38%), Gaps = 14/172 (8%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY----ITQYPES 127 F A + ++ D P +A + L +A + GKY+ + + +P S Sbjct: 180 RFGNAIKLYDMIRLDDPTGKLADDATLAAANANFKRGKYE----AADRFYTDLRQNFPSS 235 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN----SPYVKGARFYVT 183 ++ +YL +M + YD ++ + + R+ ++ + A Sbjct: 236 EHQFIGHYLGMFCKLKMYQGPSYDGQSLEEAGKLAERMERQFPDRVVEHREAIDAAKK-- 293 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 R + A + + ++ R +Y A + V+ + ++ A+ A R+VE Sbjct: 294 EVRAKQAERLWHLATFFEGRQQYGGARFYYDQVIQEFPNSNMADAARQRMVE 345 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 39/102 (38%), Gaps = 10/102 (9%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQ----------NFSKAYEYFNQCSRDFPFAG 91 S R+ D + +Y +A ++ KA + F + + + Sbjct: 42 SIRETTGKVAQDKARAKRLYAEAEAQYEQGIKAPVGQRDNALHKAADNFILAGKYYGESD 101 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 + SL+ +A Y +Y A + + + +YP +K +D V Sbjct: 102 LEENSLMYAAECYYFLDEYPDAVEMYGKLVKKYPNTKYLDQV 143 >gi|24111982|ref|NP_706492.1| tol-pal system protein YbgF [Shigella flexneri 2a str. 301] gi|110804632|ref|YP_688152.1| tol-pal system protein YbgF [Shigella flexneri 5 str. 8401] gi|24050795|gb|AAN42199.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|110614180|gb|ABF02847.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] Length = 263 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F +++P Sbjct: 116 SGATASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ G Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 187 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 188 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|30062095|ref|NP_836266.1| tol-pal system protein YbgF [Shigella flexneri 2a str. 2457T] gi|30040339|gb|AAP16072.1| hypothetical protein S0568 [Shigella flexneri 2a str. 2457T] gi|281599942|gb|ADA72926.1| putative exported protein [Shigella flexneri 2002017] gi|332763938|gb|EGJ94176.1| tol-pal system protein YbgF [Shigella flexneri K-671] gi|332768159|gb|EGJ98344.1| tol-pal system protein YbgF [Shigella flexneri 2930-71] Length = 263 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F +++P Sbjct: 116 SGATASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ G Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 187 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 188 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|239995971|ref|ZP_04716495.1| Tetratricopeptide TPR_2 [Alteromonas macleodii ATCC 27126] Length = 264 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 27/146 (18%) Query: 93 ARKSLLMSAFVQ-----YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 A ++ A+ + +Y +A + +I+++P S +Y +G Sbjct: 138 APQAGEDEAYENAVNLILKSREYDKAIPAFQSFISRFPNSGYAPNAHYWLGQLLFNK--- 194 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 + + + + R+T+S A + V A + G+ Sbjct: 195 -----QQWSEASEQFNIVANRFTDSSKRPDALLKLGVI----AE----------RTGDSS 235 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARL 233 A FQ V+ +Y D+ A +RL Sbjct: 236 TARQLFQQVVNDYPDSSAKRLAESRL 261 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 63/192 (32%), Gaps = 19/192 (9%) Query: 1 MSAVLGRAICIFEAWAYQL--YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR 58 + VL R ++ ++ K + + S V SS + + Sbjct: 85 LQKVLERQRELYLEIDKRVEALKQSGALQGSAMPSAGVDSGSVSSPTASTPTQAPQAGED 144 Query: 59 EVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL- 116 E YE AV LK + + KA F FP +G A + + ++ ++ +A+ Sbjct: 145 EAYENAVNLILKSREYDKAIPAFQSFISRFPNSGYAPNAHYWLGQLLFNKQQWSEASEQF 204 Query: 117 ---GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + +S +G+ I + D + Q ++V Y +S Sbjct: 205 NIVANRFT----DSSKRPDALLKLGV-----IAERTGDSSTAR---QLFQQVVNDYPDSS 252 Query: 174 YVKGARFYVTVG 185 + A + Sbjct: 253 AKRLAESRLNNL 264 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 39/116 (33%), Gaps = 14/116 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R + + R+ NS Y A +++ + ++ A + Sbjct: 158 REYDKAIPAFQSFISRFPNSGYAPNAHYWLGQLL--------------FNKQQWSEASEQ 203 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 F +V ++D+ +A+ +L AR++ + YP R E+ Sbjct: 204 FNIVANRFTDSSKRPDALLKLGVIAERTGDSSTARQLFQQVVNDYPDSSAKRLAES 259 >gi|115378696|ref|ZP_01465844.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca DW4/3-1] gi|310822370|ref|YP_003954728.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115364282|gb|EAU63369.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca DW4/3-1] gi|309395442|gb|ADO72901.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 343 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 25/174 (14%), Positives = 55/174 (31%), Gaps = 11/174 (6%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 M+ V R+ C + + + AV G ++ R Sbjct: 141 MAHVRLRSGCESPVLSDKRFVLQAIPPEKAAVSAGAGAPTLAAELAGKRGNPKFELARAE 200 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 EK + + + +A E F + + P + + L Q G+ A + + Sbjct: 201 LEKGERYYLNKQYKEAAEAFQRSVDNDPT--WS--ANLGLGSSQLKLGQVTAAIASLDRA 256 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ---YMSRIVERYTN 171 P + N+ Y++G ++AQ + + + ++E + Sbjct: 257 SKLQPNNPNI---LYMLGCAHAQAGSK-KRALGFLRQTVDLGYELHTVIEGDPD 306 >gi|242280186|ref|YP_002992315.1| tol-pal system protein YbgF [Desulfovibrio salexigens DSM 2638] gi|242123080|gb|ACS80776.1| tol-pal system protein YbgF [Desulfovibrio salexigens DSM 2638] Length = 283 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 8/137 (5%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +Y++ V + N KA Q P + +A +L YS Sbjct: 153 PKPVSSLSGDALYQEGVRLVMNDNPVKARGLLEQYLAQNPSSKLAPNALYWIGETYYSEK 212 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + Q+ +E ++P++ V +G++Y ++ + + Y+ ++E Sbjct: 213 SFAQSILKFKEVSRRFPKATKVPDAMLKIGLAYDKL--------GDRENAVFYLRTLIED 264 Query: 169 YTNSPYVKGARFYVTVG 185 Y S K R + Sbjct: 265 YPKSAPAKIGRERLRAI 281 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 1/74 (1%) Query: 188 QLAAKEVE-IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +LA + IG Y + +I +F+ V + A +AM ++ AY L + A Sbjct: 195 KLAPNALYWIGETYYSEKSFAQSILKFKEVSRRFPKATKVPDAMLKIGLAYDKLGDRENA 254 Query: 247 REVVSLIQERYPQG 260 + + E YP+ Sbjct: 255 VFYLRTLIEDYPKS 268 >gi|324009582|gb|EGB78801.1| tol-pal system protein YbgF [Escherichia coli MS 57-2] Length = 249 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F +++P + + + Y+ GK AA Sbjct: 132 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 191 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ T +++ +Y + K A+ Sbjct: 192 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 243 Query: 180 FYVTVG 185 + Sbjct: 244 KRLNAM 249 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ G Sbjct: 128 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 173 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 174 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 233 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 234 PGTDGAKQAQK 244 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 146 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 197 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 198 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 243 Query: 231 ARL 233 RL Sbjct: 244 KRL 246 >gi|310767032|gb|ADP11982.1| putative exported protein [Erwinia sp. Ejp617] Length = 265 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 9/126 (7%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y AV L+++ + A F + +P + + + Y+ GK AA Sbjct: 148 YNAAVALVLEKKQYDNAISAFQAFVKQYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAT 207 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + +YP+S VG+ + ++ ++++ Y+NS K A+ Sbjct: 208 VVKKYPKSPKSADALLKVGV--------IMQEKGDKAKAKAVYQQVIKLYSNSEAAKTAQ 259 Query: 180 FYVTVG 185 Sbjct: 260 KRFAAL 265 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 22/127 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y A S + ++ QYP+S Y +G + Y + +V+ Sbjct: 159 KQYDNAISAFQAFVKQYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFATVVK 210 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 +Y SP A V V ++G+ A +Q V+ YS++E A+ Sbjct: 211 KYPKSPKSADALLKVGVIMQ--------------EKGDKAKAKAVYQQVIKLYSNSEAAK 256 Query: 228 EAMARLV 234 A R Sbjct: 257 TAQKRFA 263 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ +Y AI FQ + Y D+ + A L + D+A + + ++YP+ Sbjct: 156 LEKKQYDNAISAFQAFVKQYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKKYPKS 215 Query: 261 YWARYVETLVK 271 + + L+K Sbjct: 216 --PKSADALLK 224 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 1/86 (1%) Query: 46 VYLDSVTDVRY-QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 ++ D Y Y L + A YF + +P + + +LL + Sbjct: 170 AFVKQYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKKYPKSPKSADALLKVGVIM 229 Query: 105 YSAGKYQQAASLGEEYITQYPESKNV 130 G +A ++ ++ I Y S+ Sbjct: 230 QEKGDKAKAKAVYQQVIKLYSNSEAA 255 >gi|33519800|ref|NP_878632.1| hypothetical protein Bfl340 [Candidatus Blochmannia floridanus] gi|33504145|emb|CAD83407.1| predicted lipoprotein [Candidatus Blochmannia floridanus] Length = 266 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 14/127 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + I + +++ L +Q ++ Y S Y A +++ G+ Y Sbjct: 148 YKKIVSLVLEKKQYNLAIQEFQNFIKNYPKSHYQPNAHYWL--------------GQLYY 193 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +G A F LV+ NY + A +A+ ++ D+A+ + I + YP Sbjct: 194 NQGHKTNASYHFALVVKNYPKSIKAPDALLKIGIIMQETNQKDKAKTIYQQIGKLYPNND 253 Query: 262 WARYVET 268 A+ + Sbjct: 254 AAKQAQK 260 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 43/119 (36%), Gaps = 8/119 (6%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 L+++ ++ A + F +++P + + + Y+ G A+ + YP+S Sbjct: 156 LEKKQYNLAIQEFQNFIKNYPKSHYQPNAHYWLGQLYYNQGHKTNASYHFALVVKNYPKS 215 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 +G+ + + +I + Y N+ K A+ +T + Sbjct: 216 IKAPDALLKIGIIMQETNQK--------DKAKTIYQQIGKLYPNNDAAKQAQKRLTNLK 266 >gi|87118950|ref|ZP_01074848.1| hypothetical protein MED121_11810 [Marinomonas sp. MED121] gi|86165341|gb|EAQ66608.1| hypothetical protein MED121_11810 [Marinomonas sp. MED121] Length = 262 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 54/132 (40%), Gaps = 15/132 (11%) Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 ++ + + + K + +Y NS + +++ + + Sbjct: 142 LAEYKAAYSLVRNNENAK-AEVAFVDFITKYPNSELSGNSYYWLGLLK------------ 188 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 L G+ V+AI +F+ V++ + + + + RL AY+ + + AR + + ER+P Sbjct: 189 --LNSGDPVSAIEQFKSVISLFPSHDKETDTLYRLGFAYLKVDDKESARGYLVDVIERFP 246 Query: 259 QGYWARYVETLV 270 A+ + L+ Sbjct: 247 NSKAAKLAKNLL 258 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 46/138 (33%), Gaps = 22/138 (15%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + +A+ + +A ++IT+YP S+ YY +G+ V Sbjct: 143 AEYKAAYSLVRNNENAKAEVAFVDFITKYPNSELSGNSYYWLGLLKLNSGDPVS------ 196 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 ++ ++ + + + + YLK + +A Sbjct: 197 --AIEQFKSVISLFPSHDKETDTLYRLGFA--------------YLKVDDKESARGYLVD 240 Query: 216 VLANYSDAEHAEEAMARL 233 V+ + +++ A+ A L Sbjct: 241 VIERFPNSKAAKLAKNLL 258 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 49/126 (38%), Gaps = 8/126 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A ++ +KA F +P + ++ S ++ ++G A + Sbjct: 145 YKAAYSLVRNNENAKAEVAFVDFITKYPNSELSGNSYYWLGLLKLNSGDPVSAIEQFKSV 204 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I+ +P Y +G +Y ++ + Y+ ++ER+ NS K A+ Sbjct: 205 ISLFPSHDKETDTLYRLGFAYLKVDDK--------ESARGYLVDVIERFPNSKAAKLAKN 256 Query: 181 YVTVGR 186 ++ + Sbjct: 257 LLSNIK 262 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 23/86 (26%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 D Y +L L + A E F FP +L F Sbjct: 166 DFITKYPNSELSGNSYYWLGLLKLNSGDPVSAIEQFKSVISLFPSHDKETDTLYRLGFAY 225 Query: 105 YSAGKYQQAASLGEEYITQYPESKNV 130 + A + I ++P SK Sbjct: 226 LKVDDKESARGYLVDVIERFPNSKAA 251 >gi|74311266|ref|YP_309685.1| tol-pal system protein YbgF [Shigella sonnei Ss046] gi|157158211|ref|YP_001461903.1| tol-pal system protein YbgF [Escherichia coli E24377A] gi|157160224|ref|YP_001457542.1| tol-pal system protein YbgF [Escherichia coli HS] gi|170020913|ref|YP_001725867.1| tol-pal system protein YbgF [Escherichia coli ATCC 8739] gi|187731125|ref|YP_001879399.1| tol-pal system protein YbgF [Shigella boydii CDC 3083-94] gi|188492028|ref|ZP_02999298.1| tol-pal system protein YbgF [Escherichia coli 53638] gi|194440228|ref|ZP_03072260.1| tol-pal system protein YbgF [Escherichia coli 101-1] gi|209917993|ref|YP_002292077.1| tol-pal system protein YbgF [Escherichia coli SE11] gi|218553269|ref|YP_002386182.1| tol-pal system protein YbgF [Escherichia coli IAI1] gi|218694166|ref|YP_002401833.1| tol-pal system protein YbgF [Escherichia coli 55989] gi|253774287|ref|YP_003037118.1| tol-pal system protein YbgF [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160812|ref|YP_003043920.1| tol-pal system protein YbgF [Escherichia coli B str. REL606] gi|256021182|ref|ZP_05435047.1| tol-pal system protein YbgF [Shigella sp. D9] gi|260842948|ref|YP_003220726.1| hypothetical protein ECO103_0737 [Escherichia coli O103:H2 str. 12009] gi|260853977|ref|YP_003227868.1| hypothetical protein ECO26_0803 [Escherichia coli O26:H11 str. 11368] gi|260866873|ref|YP_003233275.1| hypothetical protein ECO111_0759 [Escherichia coli O111:H- str. 11128] gi|293433010|ref|ZP_06661438.1| hypothetical protein ECCG_01134 [Escherichia coli B088] gi|297520455|ref|ZP_06938841.1| tol-pal system protein YbgF [Escherichia coli OP50] gi|300816392|ref|ZP_07096614.1| tol-pal system protein YbgF [Escherichia coli MS 107-1] gi|300907001|ref|ZP_07124670.1| tol-pal system protein YbgF [Escherichia coli MS 84-1] gi|300918403|ref|ZP_07135003.1| tol-pal system protein YbgF [Escherichia coli MS 115-1] gi|300926146|ref|ZP_07141959.1| tol-pal system protein YbgF [Escherichia coli MS 182-1] gi|300929452|ref|ZP_07144920.1| tol-pal system protein YbgF [Escherichia coli MS 187-1] gi|301305230|ref|ZP_07211328.1| tol-pal system protein YbgF [Escherichia coli MS 124-1] gi|301327935|ref|ZP_07221106.1| tol-pal system protein YbgF [Escherichia coli MS 78-1] gi|307314793|ref|ZP_07594387.1| tol-pal system protein YbgF [Escherichia coli W] gi|309797457|ref|ZP_07691849.1| tol-pal system protein YbgF [Escherichia coli MS 145-7] gi|312970821|ref|ZP_07785000.1| tol-pal system protein YbgF [Escherichia coli 1827-70] gi|331667109|ref|ZP_08367974.1| putative periplasmic protein [Escherichia coli TA271] gi|331676424|ref|ZP_08377121.1| putative tol-pal system protein YbgF [Escherichia coli H591] gi|332282409|ref|ZP_08394822.1| tol-pal system protein YbgF [Shigella sp. D9] gi|73854743|gb|AAZ87450.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|157065904|gb|ABV05159.1| tol-pal system protein YbgF [Escherichia coli HS] gi|157080241|gb|ABV19949.1| tol-pal system protein YbgF [Escherichia coli E24377A] gi|169755841|gb|ACA78540.1| tol-pal system protein YbgF [Escherichia coli ATCC 8739] gi|187428117|gb|ACD07391.1| tol-pal system protein YbgF [Shigella boydii CDC 3083-94] gi|188487227|gb|EDU62330.1| tol-pal system protein YbgF [Escherichia coli 53638] gi|194420837|gb|EDX36892.1| tol-pal system protein YbgF [Escherichia coli 101-1] gi|209911252|dbj|BAG76326.1| conserved hypothetical protein [Escherichia coli SE11] gi|218350898|emb|CAU96596.1| putative RNA binding protein [Escherichia coli 55989] gi|218360037|emb|CAQ97584.1| putative RNA binding protein [Escherichia coli IAI1] gi|242376504|emb|CAQ31208.1| predicted periplasmic protein, subunit of The Tol-Pal Cell Envelope Complex, Colicin S4 Transport System and The Colicin A Import System [Escherichia coli BL21(DE3)] gi|253325331|gb|ACT29933.1| tol-pal system protein YbgF [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972713|gb|ACT38384.1| hypothetical protein ECB_00702 [Escherichia coli B str. REL606] gi|253976907|gb|ACT42577.1| hypothetical protein ECD_00702 [Escherichia coli BL21(DE3)] gi|257752626|dbj|BAI24128.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368] gi|257758095|dbj|BAI29592.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009] gi|257763229|dbj|BAI34724.1| conserved predicted protein [Escherichia coli O111:H- str. 11128] gi|291323829|gb|EFE63251.1| hypothetical protein ECCG_01134 [Escherichia coli B088] gi|300401222|gb|EFJ84760.1| tol-pal system protein YbgF [Escherichia coli MS 84-1] gi|300414466|gb|EFJ97776.1| tol-pal system protein YbgF [Escherichia coli MS 115-1] gi|300417845|gb|EFK01156.1| tol-pal system protein YbgF [Escherichia coli MS 182-1] gi|300462561|gb|EFK26054.1| tol-pal system protein YbgF [Escherichia coli MS 187-1] gi|300531082|gb|EFK52144.1| tol-pal system protein YbgF [Escherichia coli MS 107-1] gi|300839542|gb|EFK67302.1| tol-pal system protein YbgF [Escherichia coli MS 124-1] gi|300845578|gb|EFK73338.1| tol-pal system protein YbgF [Escherichia coli MS 78-1] gi|306905691|gb|EFN36219.1| tol-pal system protein YbgF [Escherichia coli W] gi|308118981|gb|EFO56243.1| tol-pal system protein YbgF [Escherichia coli MS 145-7] gi|309700964|emb|CBJ00261.1| putative tetratricopeptide repeat exported protein [Escherichia coli ETEC H10407] gi|310336582|gb|EFQ01749.1| tol-pal system protein YbgF [Escherichia coli 1827-70] gi|315059985|gb|ADT74312.1| predicted protein [Escherichia coli W] gi|315257661|gb|EFU37629.1| tol-pal system protein YbgF [Escherichia coli MS 85-1] gi|320172955|gb|EFW48183.1| tol-pal system protein YbgF [Shigella dysenteriae CDC 74-1112] gi|320179417|gb|EFW54374.1| tol-pal system protein YbgF [Shigella boydii ATCC 9905] gi|320183983|gb|EFW58807.1| tol-pal system protein YbgF [Shigella flexneri CDC 796-83] gi|320198138|gb|EFW72742.1| tol-pal system protein YbgF [Escherichia coli EC4100B] gi|323153742|gb|EFZ39989.1| tol-pal system protein YbgF [Escherichia coli EPECa14] gi|323158794|gb|EFZ44807.1| tol-pal system protein YbgF [Escherichia coli E128010] gi|323163901|gb|EFZ49711.1| tol-pal system protein YbgF [Shigella sonnei 53G] gi|323180018|gb|EFZ65574.1| tol-pal system protein YbgF [Escherichia coli 1180] gi|323185097|gb|EFZ70463.1| tol-pal system protein YbgF [Escherichia coli 1357] gi|323379455|gb|ADX51723.1| tol-pal system protein YbgF [Escherichia coli KO11] gi|323938281|gb|EGB34539.1| tol-pal system protein YbgF [Escherichia coli E1520] gi|323946992|gb|EGB43006.1| tol-pal system protein YbgF [Escherichia coli H120] gi|324116284|gb|EGC10205.1| tol-pal system protein YbgF [Escherichia coli E1167] gi|331065465|gb|EGI37358.1| putative periplasmic protein [Escherichia coli TA271] gi|331075917|gb|EGI47214.1| putative tol-pal system protein YbgF [Escherichia coli H591] gi|332093803|gb|EGI98857.1| tol-pal system protein YbgF [Shigella boydii 5216-82] gi|332096487|gb|EGJ01483.1| tol-pal system protein YbgF [Shigella dysenteriae 155-74] gi|332104761|gb|EGJ08107.1| tol-pal system protein YbgF [Shigella sp. D9] gi|332342079|gb|AEE55413.1| tol-pal system protein YbgF [Escherichia coli UMNK88] Length = 263 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F +++P Sbjct: 116 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ G Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 187 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 188 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|323170863|gb|EFZ56513.1| tol-pal system protein YbgF [Escherichia coli LT-68] Length = 254 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F +++P Sbjct: 107 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 166 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 167 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 218 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 219 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 254 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ Sbjct: 133 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 181 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 182 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 238 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 239 PGTDGAKQAQK 249 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 151 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 202 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 203 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 248 Query: 231 ARL 233 RL Sbjct: 249 KRL 251 >gi|331662102|ref|ZP_08363025.1| putative periplasmic protein [Escherichia coli TA143] gi|284920529|emb|CBG33591.1| putative tetratricopeptide repeat exported protein [Escherichia coli 042] gi|331060524|gb|EGI32488.1| putative periplasmic protein [Escherichia coli TA143] Length = 263 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F +++P + + + Y+ GK AA Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ T +++ +Y + K A+ Sbjct: 206 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 180 FYVTVG 185 + Sbjct: 258 KRLNAM 263 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ G Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 187 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 188 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|239908044|ref|YP_002954785.1| hypothetical protein DMR_34080 [Desulfovibrio magneticus RS-1] gi|239797910|dbj|BAH76899.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 435 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 8/134 (5%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T Q+ Y +A+ ++A F+Q + P + + +L ++ G Y Sbjct: 308 TASPAQKAEYNRALQLAINGRTAEAKTAFDQFLANHPSSPLTPNALYWVGEGAFAQGDYM 367 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + ++ +P Y + M+ + + R ++ Y N Sbjct: 368 TAIADFDKVAKGWPGHHKAADSLYKMAMAQEKA--------GNMAAARASLERYLKDYPN 419 Query: 172 SPYVKGARFYVTVG 185 + AR + Sbjct: 420 AELAAVARQKLQAL 433 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 36/107 (33%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 +A+ + + + + +Y + ++ A F++ ++ Sbjct: 320 ALQLAINGRTAEAKTAFDQFLANHPSSPLTPNALYWVGEGAFAQGDYMTAIADFDKVAKG 379 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 +P A SL A Q AG A + E Y+ YP ++ Sbjct: 380 WPGHHKAADSLYKMAMAQEKAGNMAAARASLERYLKDYPNAELAAVA 426 >gi|119944500|ref|YP_942180.1| TPR repeat-containing protein [Psychromonas ingrahamii 37] gi|119863104|gb|ABM02581.1| Tetratricopeptide TPR_2 repeat protein [Psychromonas ingrahamii 37] Length = 255 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 27/137 (19%) Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 +A ++ + V Y QA + E ++ YPES+ + +Y +G+ Q Sbjct: 135 QLAYQAAVDLVLVN---KDYDQAITAFEAFVIDYPESEYIANSHYWLGLVLYQ------- 184 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR-YYLKRGEYVAA 209 Q+ K + E++ S + F + + L E+ + +Y K Sbjct: 185 -QKKRKEARVAFLTVSEKFPESVKRADSLFKIGIIDEYLG--ELASAKEFYQK------- 234 Query: 210 IPRFQLVLANYSDAEHA 226 VL Y ++ A Sbjct: 235 ------VLKEYPNSSAA 245 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 38/121 (31%), Gaps = 16/121 (13%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV-TVGRNQLAAKEVEIGRYY 200 Q D+ + + V Y S Y+ + +++ V Q KE + Sbjct: 138 YQAAVDLVLVNKDYDQAITAFEAFVIDYPESEYIANSHYWLGLVLYQQKKRKEARVA--- 194 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 F V + ++ +++ ++ L + A+E + + YP Sbjct: 195 ------------FLTVSEKFPESVKRADSLFKIGIIDEYLGELASAKEFYQKVLKEYPNS 242 Query: 261 Y 261 Sbjct: 243 S 243 >gi|313649615|gb|EFS14039.1| tol-pal system protein YbgF [Shigella flexneri 2a str. 2457T] gi|332761239|gb|EGJ91525.1| tol-pal system protein YbgF [Shigella flexneri 2747-71] gi|333021411|gb|EGK40661.1| tol-pal system protein YbgF [Shigella flexneri K-304] Length = 254 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F +++P Sbjct: 107 SGATASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 166 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 167 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 218 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 219 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 254 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ G Sbjct: 133 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 178 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 179 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 238 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 239 PGTDGAKQAQK 249 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 151 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 202 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 203 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 248 Query: 231 ARL 233 RL Sbjct: 249 KRL 251 >gi|218962008|ref|YP_001741783.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] gi|167730665|emb|CAO81577.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] Length = 1953 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 29/82 (35%), Gaps = 1/82 (1%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y + +A S + I Y S D Y +G+ Y + D QR L Sbjct: 651 YKESDFAEAISSYQRIIDNYKTSPYYDESLYRLGILYYYIATDADQPQRYYALATNCFDE 710 Query: 165 IVERYTNSPYVKGARFYVTVGR 186 I+ + NS Y A + R Sbjct: 711 IINK-PNSKYQYDAIYQRGWLR 731 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 51/132 (38%), Gaps = 23/132 (17%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--EIGRYY--------------L 201 L+ ++V+ N+ + A + + +QL+ + + R+Y Sbjct: 592 ALESYRKVVQLDPNNVNIDAALYNIGFISSQLSHQRIGDNKARFYEINRTAVALDDASRY 651 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA-LMDEAREVVSLIQERY--- 257 K ++ AI +Q ++ NY + + +E++ RL Y +A D+ + +L + Sbjct: 652 KESDFAEAISSYQRIIDNYKTSPYYDESLYRLGILYYYIATDADQPQRYYALATNCFDEI 711 Query: 258 ---PQGYWARYV 266 P + Sbjct: 712 INKPNSKYQYDA 723 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%) Query: 90 AGVARKSLLMSAFVQY-SAGKYQQAASLGEEYITQYPESKNV 130 + +LL A + Y A +A +IT YP ++NV Sbjct: 1310 GNITPDALLAKAAILYSEAENKDKAVETYNRFITLYPNNENV 1351 >gi|84500891|ref|ZP_00999126.1| TPR domain protein [Oceanicola batsensis HTCC2597] gi|84390958|gb|EAQ03376.1| TPR domain protein [Oceanicola batsensis HTCC2597] Length = 151 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 39/127 (30%), Gaps = 18/127 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117 + + L+ A +F+ P FA R++ Y ++ A S Sbjct: 34 LMSRGQDALEAGEVETAIGHFSALIDHAPDFAEAWHRRAT-----AFYRQEEFGLAISDL 88 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P+ N Y +G+ + R P + S+++E Y Sbjct: 89 GRALALNPQHFN---AMYGLGVILESLDRPDP--------AFRAYSQVLELYPTHERALE 137 Query: 178 ARFYVTV 184 A + Sbjct: 138 AVDRLQA 144 >gi|332097655|gb|EGJ02630.1| tol-pal system protein YbgF [Shigella boydii 3594-74] gi|333007347|gb|EGK26827.1| tol-pal system protein YbgF [Shigella flexneri VA-6] gi|333010139|gb|EGK29574.1| tol-pal system protein YbgF [Shigella flexneri K-272] gi|333021091|gb|EGK40348.1| tol-pal system protein YbgF [Shigella flexneri K-227] Length = 254 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F +++P Sbjct: 107 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 166 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 167 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 218 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 219 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 254 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ G Sbjct: 133 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 178 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 179 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 238 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 239 PGTDGAKQAQK 249 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 151 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 202 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 203 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 248 Query: 231 ARL 233 RL Sbjct: 249 KRL 251 >gi|300871531|ref|YP_003786404.1| putative hemolysin [Brachyspira pilosicoli 95/1000] gi|300689232|gb|ADK31903.1| putative hemolysin [Brachyspira pilosicoli 95/1000] Length = 346 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 9/126 (7%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A ++N+ KA Y+N+ + FP ++L Y+ Y A + Sbjct: 226 AHRMYVQKNYVKARMYYNKIATLFPRTKYQEEALFKIGESYYNEKNYNSAVDYFNR-VRL 284 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 +G+SY ++ R + + V Y ++P V A+ Y+ Sbjct: 285 NNVYTLDAEALLYIGLSYFKVGRYSD--------SYKALDTFVNTYPDNPNVSRAKDYMA 336 Query: 184 VGRNQL 189 + L Sbjct: 337 ALQETL 342 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 + +++ + E+N++ A +YFN+ + + A +LL + G+Y + Sbjct: 256 EEALFKIGESYYNEKNYNSAVDYFNRVRLNNVYTLDAE-ALLYIGLSYFKVGRYSDSYKA 314 Query: 117 GEEYITQYPESKNVDYVY-YLVGM 139 + ++ YP++ NV Y+ + Sbjct: 315 LDTFVNTYPDNPNVSRAKDYMAAL 338 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 69/201 (34%), Gaps = 30/201 (14%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 E+ + +A YF + ++L A V ++ +Y +A + E+++ Sbjct: 153 GYQLFFEKKYGEALSYFLRSD--------GELAVLGRARVYFAMNEYDRAFEIYEDFLKY 204 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYD---QRATKLMLQYMSRIVERYTNSPYVKGARF 180 Y S Y V +Y + + + Q+ Y ++I + + Y + A F Sbjct: 205 YNTSIY----YNEVSRTYLIQVPAIAHRMYVQKNYVKARMYYNKIATLFPRTKYQEEALF 260 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 IG Y Y +A+ F V N A EA+ + +Y + Sbjct: 261 K--------------IGESYYNEKNYNSAVDYFNRVRLNNVYTLDA-EALLYIGLSYFKV 305 Query: 241 ALMDEAREVVSLIQERYPQGY 261 ++ + + YP Sbjct: 306 GRYSDSYKALDTFVNTYPDNP 326 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 15/114 (13%), Positives = 40/114 (35%), Gaps = 10/114 (8%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + ++ Y S Y + +A + + + Y+K Y + + Sbjct: 193 RAFEIYEDFLKYYNTSIYYNEVSRTYLIQVPAIA-HRMYVQKNYVKARMY------YNKI 245 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + ++ EEA+ ++ E+Y + A + + ++ + E L+ Sbjct: 246 ATLFPRTKYQEEALFKIGESYYNEKNYNSAVDYFNRVRLN---NVYTLDAEALL 296 >gi|238924772|ref|YP_002938288.1| hypothetical protein EUBREC_2423 [Eubacterium rectale ATCC 33656] gi|238876447|gb|ACR76154.1| Hypothetical protein EUBREC_2423 [Eubacterium rectale ATCC 33656] Length = 320 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 78/244 (31%), Gaps = 36/244 (14%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 ALT+ + L G D D R+ + ++ ++ A + F Sbjct: 7 MALTLTVVLTAGMLTGCGSG-------DKAKDKDAYRQY---GINCIENGSYDDAVDAFQ 56 Query: 82 QCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + + A L + QY +G A I +K+ D YYL Sbjct: 57 KALDQSVGSVGAE--ELDICYYKAKAQYLSGDVDGAIDTYTAIID---YNKDSD-AYYLR 110 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERY-----TNSPYV--KGARFYVT---VGRN 187 G Y D + K L + E Y T S Y + Y+ + Sbjct: 111 GCIYFAK-NDSDKGLKDFKTALSENNDNYELYLGVYETLSKYGMNDQGKEYLDNALKLKA 169 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 + A ++ GR Y G+Y +AI Q + E +A + E Y D ++ Sbjct: 170 KTADDYMQRGRIYTMLGDYDSAIKSLQKAID-----EKLVKANYYMGEVYQKKGDNDSSQ 224 Query: 248 EVVS 251 + Sbjct: 225 KYFK 228 Score = 42.8 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 7/76 (9%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 E+ + N+ A YF + ++ +G + A S Sbjct: 240 ELMNMGQAQMDNGNYDTAITYFQNALELESV----PNKQQITKAMIIAYEYSGDFATAKS 295 Query: 116 LGEEYITQYPESKNVD 131 EEY+ YP+ ++ Sbjct: 296 KMEEYMKDYPDDEDAA 311 >gi|254453620|ref|ZP_05067057.1| tetratricopeptide TPR_2 [Octadecabacter antarcticus 238] gi|198268026|gb|EDY92296.1| tetratricopeptide TPR_2 [Octadecabacter antarcticus 238] Length = 261 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 8/129 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++E + +A L NF A + + +P + VA + L+ G+ AA Sbjct: 138 EQEDFTRAQEALASGNFRGAVDLLATFNETYPGSPVAADAHLLRGQAYEQMGETTNAARA 197 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + PE +G S A + + + + + R+ +P V Sbjct: 198 YLAAFSGNPEGPLAPAALTKLGQSLAALGQQ--------QDACVTLGEVGTRFPGAPKVG 249 Query: 177 GARFYVTVG 185 AR + Sbjct: 250 EARQAMASL 258 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 19/118 (16%) Query: 147 DVPYDQRA-----TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 D Q A + + ++ E Y SP A Q+ R Sbjct: 141 DFTRAQEALASGNFRGAVDLLATFNETYPGSPVAADAHLLRGQAYEQMGET-TNAAR--- 196 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y+AA + + A A+ +L ++ AL +A + + R+P Sbjct: 197 ---AYLAA-------FSGNPEGPLAPAALTKLGQSLAALGQQQDACVTLGEVGTRFPG 244 >gi|170682384|ref|YP_001742853.1| tol-pal system protein YbgF [Escherichia coli SMS-3-5] gi|170520102|gb|ACB18280.1| tol-pal system protein YbgF [Escherichia coli SMS-3-5] Length = 263 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F +++P Sbjct: 116 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|148265114|ref|YP_001231820.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4] gi|146398614|gb|ABQ27247.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4] Length = 1108 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 61/146 (41%), Gaps = 23/146 (15%) Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 +A +L ++ + +YP D V Y + +Y ++ T+ + M R+V + + Sbjct: 203 EAIALYKKLLDKYPLYPGNDQVLYQMSRAYEEL--------GQTEDAMGVMDRLVRDFPH 254 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 SPY+ RF ++ R Y+ A ++ ++ + + + E A+ Sbjct: 255 SPYIDEVRFRR--------------AEFFFTRKRYLDAEAAYKSIVDMGAGSPYYELALY 300 Query: 232 RLVEAYVALALMDEA-REVVSLIQER 256 +L + L +E + ++L+ + Sbjct: 301 KLGWTFYKQELYEEGLQRFIALLDRK 326 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 39/121 (32%), Gaps = 8/121 (6%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E L+ +A + + +P + L + G+ + A + + + Sbjct: 190 EAGTEDLERAGTREAIALYKKLLDKYPLYPGNDQVLYQMSRAYEELGQTEDAMGVMDRLV 249 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 +P S +D V + + R + IV+ SPY + A + Sbjct: 250 RDFPHSPYIDEVRFRRAEFFFTRKRYLD--------AEAAYKSIVDMGAGSPYYELALYK 301 Query: 182 V 182 + Sbjct: 302 L 302 Score = 42.0 bits (98), Expect = 0.085, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 24/54 (44%) Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 AI ++ +L Y ++ + ++ AY L ++A V+ + +P + Sbjct: 204 AIALYKKLLDKYPLYPGNDQVLYQMSRAYEELGQTEDAMGVMDRLVRDFPHSPY 257 Score = 39.7 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 55/183 (30%), Gaps = 24/183 (13%) Query: 45 DVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 D + Y EV + +A F + + A + + +L + Sbjct: 246 DRLVRDFPHSPYIDEVRFRRAEFFFTRKRYLDAEAAYKSIVDMGAGSPYYELALYKLGWT 305 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y Y++ + +I + V G +AQ D+ K + Sbjct: 306 FYKQELYEEGL---QRFIAL--LDRKVA-----TGYDFAQTKDDLER-----KRVDDAFR 350 Query: 164 RIVERYTNSPYVKGARFYVTVG-RNQLAAKEVEI----GRYYLKRGEYVAAIPRFQLVLA 218 I + + Y++GA + N + E I G +Y + Y A + + Sbjct: 351 VISQSF---SYLRGADSVMEYFDTNGKRSYEDRIYSNLGEFYFDKRRYSDAAAAYNAFVT 407 Query: 219 NYS 221 Sbjct: 408 RNP 410 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 42/131 (32%), Gaps = 14/131 (10%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A ++ +++ A FP + + A+V GK AA E Sbjct: 726 YDAAAALIQLKDWKMAATVLVGFRDLFPGHQLQPEVTRKIAYVYKEDGKLSLAADEYERV 785 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 ++ + + V G + ++ +K L R V + Sbjct: 786 EREF-KDEEV-----RRGA--LMLAAELHQQTGNSKQALAVYRRFVGSFPQ---PVEVNL 834 Query: 181 YVTVGRNQLAA 191 + RN++A Sbjct: 835 EM---RNKIAE 842 Score = 35.1 bits (80), Expect = 9.5, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 33/88 (37%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 + +Y+ + + + A ++ RDFP + + A ++ +Y A + Sbjct: 222 DQVLYQMSRAYEELGQTEDAMGVMDRLVRDFPHSPYIDEVRFRRAEFFFTRKRYLDAEAA 281 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQM 144 + + S + Y +G ++ + Sbjct: 282 YKSIVDMGAGSPYYELALYKLGWTFYKQ 309 >gi|260431106|ref|ZP_05785077.1| tetratricopeptide TPR_2 repeat protein [Silicibacter lacuscaerulensis ITI-1157] gi|260414934|gb|EEX08193.1| tetratricopeptide TPR_2 repeat protein [Silicibacter lacuscaerulensis ITI-1157] Length = 274 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 48/132 (36%), Gaps = 14/132 (10%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +++ ++ A+ L + +F A + Q +P + +A ++ L + G ++AA Sbjct: 151 EQDDFDTALQALADGDFQTAADLLAQFDTKYPGSPLAPEASLRRGQALEALGDTREAARA 210 Query: 117 GEEYITQYPES---KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 ++ + Y +G + ++ + + + R+ +S Sbjct: 211 ---FLASFTGDSEGPLAPEALYELGAALGRL--------GQVEQACITLGEVAARFPDSA 259 Query: 174 YVKGARFYVTVG 185 +V + + Sbjct: 260 FVAASTQEMASL 271 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 35/113 (30%), Gaps = 20/113 (17%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + +++ +Y SP A L R Sbjct: 165 GDFQTAADLLAQFDTKYPGSPLAPEASLRRGQALEALGD----------TREA------- 207 Query: 213 FQLVLANY---SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + LA++ S+ A EA+ L A L +++A + + R+P + Sbjct: 208 ARAFLASFTGDSEGPLAPEALYELGAALGRLGQVEQACITLGEVAARFPDSAF 260 >gi|149178735|ref|ZP_01857318.1| hypothetical protein PM8797T_01479 [Planctomyces maris DSM 8797] gi|148842433|gb|EDL56813.1| hypothetical protein PM8797T_01479 [Planctomyces maris DSM 8797] Length = 867 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 92/307 (29%), Gaps = 84/307 (27%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 ++++ + + + + ++ + L+ +A +F + ++P A ++ + V Sbjct: 530 FINTNPEKQMPQALVQRGEILLELDRLDEAINHFERVMTNYPTDVSAFEAQYLLGIVYLE 589 Query: 107 AGKYQQAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIR----------------- 146 + QA ++ +E + P++K + +G + Sbjct: 590 KNELDQAQAVWKEILESSQLTPKAKQWGDALFSLGKLNFHQGKIAESEKQSETAEDAPEG 649 Query: 147 --DVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR---------------FYVTVGRNQL 189 R + + ++ V+RY S + AR + R Sbjct: 650 QITGSRQNRYYEEATRRLTEYVKRYPESEKISEARYLLARSLQNLSDQPLREMKEARTDN 709 Query: 190 AAKEVEIGRY-----------YLKR---------------------------------GE 205 A +E++ ++ YL R E Sbjct: 710 ARQELKRKQFGYLNQALTQLQYLNRDLRQLENRDRLDALGKQLLKSSCFGKAHILYLTEE 769 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR---EVVSLIQERYPQGYW 262 Y AI + + Y A ++ Y AL +EA+ E +I ++ P + Sbjct: 770 YAEAIKSYHDAVNRYPQCTEVLIAYMKMSGCYEALGKKNEAKSMLEQAKIILKQMPDSVF 829 Query: 263 ARYVETL 269 L Sbjct: 830 ESGATNL 836 >gi|32473196|ref|NP_866190.1| signal peptide [Rhodopirellula baltica SH 1] gi|32397875|emb|CAD73876.1| hypothetical protein-transmembrane regio and signal peptide prediction [Rhodopirellula baltica SH 1] Length = 404 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 85/223 (38%), Gaps = 21/223 (9%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + D ++ +++ + L + A +Q D P +A + + +A G Sbjct: 170 ATQDDWFKFNLFDASRPRLDAE--GHAVRVLDQIRYDNPTGRLADDATMAAAVEYMRQGD 227 Query: 110 YQQAASLGEEYIT----QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 ++ +E++T +PES + + + ++ Y + + + + Sbjct: 228 FE----TADEFLTDLRETFPESDHFFNAHLMGIRCKLEVFAGPKYSGLMLEEADKLVRQT 283 Query: 166 VERYTN-------SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ER+ + S V A V R A K + Y KR EY AA +Q++L Sbjct: 284 RERFPDRLRDPETSEMVARAAAEVAYRR---AEKLNDRAIYREKRSEYGAARLHYQMILR 340 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Y A+ A RL EA + + R +L++ +P Sbjct: 341 DYPSTPFADRARQRL-EAITSYPDVPAERVSATLLKRIFPDSR 382 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 34/254 (13%), Positives = 87/254 (34%), Gaps = 59/254 (23%) Query: 50 SVTDVRYQREVYEKAVLFL-------------------KEQNFSKAYEYFNQCSRDFPFA 90 + R++Y++A ++++F++A + F + + P Sbjct: 51 EQPNAERARDLYQEADQLFRGAASRFNQTERDGEAEGTEKKDFARAAKLFARAADAQPGT 110 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--------YYLVGMSYA 142 +A+ ++ M A + + + AA + E ++P +++VD Y + A Sbjct: 111 ALAQDAMFMQAESLFFSDQLPDAADVYERLNKEFPNNRHVDQAAARAFAISQYWIDTEVA 170 Query: 143 QMIR-------DVPYDQRATK-LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 D + + ++ + +I A + Sbjct: 171 TQDDWFKFNLFDASRPRLDAEGHAVRVLDQIRYDNPTGRLADDAT--------------M 216 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA---------YVALALMDE 245 Y+++G++ A + + +++H A + Y L +++E Sbjct: 217 AAAVEYMRQGDFETADEFLTDLRETFPESDHFFNAHLMGIRCKLEVFAGPKYSGL-MLEE 275 Query: 246 AREVVSLIQERYPQ 259 A ++V +ER+P Sbjct: 276 ADKLVRQTRERFPD 289 >gi|134095786|ref|YP_001100861.1| hypothetical protein HEAR2618 [Herminiimonas arsenicoxydans] gi|133739689|emb|CAL62740.1| Conserved hypothetical protein; putative membrane protein; putative TPR repeat [Herminiimonas arsenicoxydans] Length = 582 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 10/123 (8%) Query: 23 ALTIFFSIAVCFLVGWERQSS--RDVYLD--SVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 IFF +A L ++S +D S + + R Y + +L+E+ +++A + Sbjct: 401 VFAIFFLLARERLTSLATEASVWKDAASKLVSPSLIGSDRIFYNRGRAYLQEKKYAEAID 460 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F+ + + ++ A YS KY +A + + ++N Y+ YL G Sbjct: 461 DFSHTIQQ---SPRVSQAYYNRALAYYSLEKYPEAMADLNHALLL---NENNAYIQYLRG 514 Query: 139 MSY 141 + + Sbjct: 515 LVF 517 >gi|108763880|ref|YP_632213.1| transglycosylase SLT domain-containing protein [Myxococcus xanthus DK 1622] gi|108467760|gb|ABF92945.1| transglycosylase SLT domain protein [Myxococcus xanthus DK 1622] Length = 711 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 37/118 (31%), Gaps = 7/118 (5%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 L+ F+ A + F +P + + + A +Y +A + + ++T YP+S Sbjct: 332 LQAGRFADAVQAFTAFETRYPRSRRRDEGMWFRALAHLRQEEYAKARAALDAFLTAYPKS 391 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 Y M R D + ++ S Y A + Sbjct: 392 NMGPQARY-------WMARSRELDGAKADTLGPAYEAVITSAPASFYALMANERLKAL 442 >gi|196228135|ref|ZP_03127002.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] gi|196227538|gb|EDY22041.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] Length = 844 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 26/188 (13%) Query: 45 DVYLDSVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSA 101 D YL + D + E + KA + K++++ A ++ A +L Sbjct: 406 DKYLAANPDADKRDEALLMKAEILFKKEDWEGAMAIYSTLELSHQLTGNRKAE-ALFRLG 464 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + Q A + A + T YP K V Y G++ + + L+ Sbjct: 465 WCQLQAKNTEAAIKTFTSFATAYPTHKLVPYALLQRGLAEQSL--------KNLTGALKD 516 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 +I++ + +P + A + Q +G A F+ +L + Sbjct: 517 YEQIIKSFPKAPQRELALQQKALIEGQ--------------QGNNSAMALSFKQLLKEFP 562 Query: 222 DAEHAEEA 229 + +A Sbjct: 563 ETAARAQA 570 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 26/217 (11%), Positives = 63/217 (29%), Gaps = 46/217 (21%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + D DV+ Q + A + ++A F + SR+FP + +++ Sbjct: 334 NKMDKDVSPDVKPQLLLLA-ANASRQLNKMAEALNLFGEVSREFPGSVYDKEAQYERLRT 392 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR----------------- 146 Y+A ++Y+ P++ D + + Sbjct: 393 LYAAND-ASLVGEIDKYLAANPDADKRDEALLMKAEILFKKEDWEGAMAIYSTLELSHQL 451 Query: 147 -------------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + T+ ++ + Y V A + + LA + Sbjct: 452 TGNRKAEALFRLGWCQLQAKNTEAAIKTFTSFATAYPTHKLVPYA-----LLQRGLAEQS 506 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 + A+ ++ ++ ++ A E A+ Sbjct: 507 L---------KNLTGALKDYEQIIKSFPKAPQRELAL 534 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 22/168 (13%), Positives = 46/168 (27%), Gaps = 22/168 (13%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L A Y +Y+ AA E+Y+ Y + + + +G Y Sbjct: 89 QLSLADNYYEKKQYEMAAPEYEKYLGLYKNAPDTATALFRLGECY--------RHIGNVN 140 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 ++ ++ + ++ A + + Y +Y A+ ++ Sbjct: 141 SAKNAYETLLAQFASGEFIGPASYRL--------------ADLYYADKQYRDALTLYRKA 186 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 + A A AL EAR + + Sbjct: 187 SVRLREPAVANAAKFFTGRCLEALGQKMEARGTYEDLVSSEKDNPFYD 234 >gi|89890624|ref|ZP_01202134.1| conserved hypothetical protein, TPR domain [Flavobacteria bacterium BBFL7] gi|89517539|gb|EAS20196.1| conserved hypothetical protein, TPR domain [Flavobacteria bacterium BBFL7] Length = 1006 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 83/233 (35%), Gaps = 48/233 (20%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +YE ++ N K + +++ +FP + ++++ Y+ K A + ++ Sbjct: 613 LYELGNTYINTNNVDKGIQTYDRLINEFPKSSYTSQAMMRKGLQLYNDSKLDDALVVFKD 672 Query: 120 YITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPYDQRATKLMLQ- 160 ++ YP + DY ++ + + + D D A + Q Sbjct: 673 VVSTYPGTPQANEAVSSARLIYVDQNRTNDYAAWVRTLDFVD-VSDSELDDTAYESAEQP 731 Query: 161 -----------YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 M + + Y N + A FY+ K+ I Y Sbjct: 732 YLQNDMSGTTRSMRKYLAEYPNGKHALQAHFYLAQALFSQDKKQESIASY---------- 781 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE--RYPQG 260 + V+ +E E+A+ARL E Y+ +A V++ +++ +PQ Sbjct: 782 ----EYVINK-ERSEFTEQALARLSEIYLGDKAYAKAIPVLTQLEQLADFPQN 829 Score = 42.8 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 58/203 (28%), Gaps = 52/203 (25%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAAS 115 Y+ A K ++++ A F ++ + L A+ + + +Y A Sbjct: 502 YDLAYTQFKLKDYTNAINTFTAYTKQ--SGIDNEPARLNDAYLRIGDANFVSKQYWPAME 559 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSY-----------------AQMIRDVPYDQ------ 152 + I+ N DY + +SY + R D Sbjct: 560 AYNKSISMN--GFNADYAAFQKAISYGFVGKNDRKIEDLNGFLNKFNRSAYRDDVLYELG 617 Query: 153 ------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 +Q R++ + S Y A + QL + Sbjct: 618 NTYINTNNVDKGIQTYDRLINEFPKSSYTSQAMMRKGL---QL-----------YNDSKL 663 Query: 207 VAAIPRFQLVLANYSDAEHAEEA 229 A+ F+ V++ Y A EA Sbjct: 664 DDALVVFKDVVSTYPGTPQANEA 686 Score = 42.0 bits (98), Expect = 0.093, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 56/186 (30%), Gaps = 31/186 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + + +A Y + + + Y G +++A + Sbjct: 250 GQSLFNQGKYDQALPYLEEYKGVRGRLNNNDYYQ-----LGYAYYKQGDFEKAIETFNKI 304 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + E+K YY + SY ++ + + L + E ++ + A + Sbjct: 305 VDG--ENKTAQNAYYHLAQSYIKLNKS--------EDALNAFKKASEMDFDTQIQQDASY 354 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + E G Y A I + L Y D + E L+++Y + Sbjct: 355 NYAKI-----SYEY--GNPY---DSVPAVILAY---LEKYPDTDKNAEMNEFLIDSYFSS 401 Query: 241 ALMDEA 246 EA Sbjct: 402 KNYTEA 407 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 29/219 (13%), Positives = 64/219 (29%), Gaps = 23/219 (10%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 +S + ++ ++ + + ++L ++ ++KA Q + F + Sbjct: 779 ASYEYVINKERSEFTEQALARLSEIYLGDKAYAKAIPVLTQLEQLADFPQNVIYAQSNLM 838 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 Y Y Q+ S +S + +V D + Sbjct: 839 KAYYEQENYDQSVSYAN------------------KVLSDLTISDNVKSDANVI-IARSS 879 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 E + Y + A + K G Y AAI Q + NY+ Sbjct: 880 WKTGNEAAAKTAYET---VRLNASGTLAAEATYFKAYFEHKAGNYDAAIATVQSLTKNYA 936 Query: 222 DAE-HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + + + + + Y A A ++ + + Q Sbjct: 937 GYKLWTSKGLVIMGKCYNAQGQTLNATTILEYVVGNFAQ 975 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 54/193 (27%), Gaps = 26/193 (13%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + E N F + L + + + I ++P+S Sbjct: 587 GKNDRKIEDLNGFLNKFNRSAYRDDVLYELGNTYINTNNVDKGIQTYDRLINEFPKSSYT 646 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA--RFYVTVGRNQ 188 G+ Q+ D D L +V Y +P A + Sbjct: 647 SQAMMRKGL---QLYNDSKLD-----DALVVFKDVVSTYPGTPQANEAVSSARLIYVDQN 698 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 + +Y AA R + + SD+E + A + Y+ + R Sbjct: 699 -------------RTNDY-AAWVRTLDFV-DVSDSELDDTAYESAEQPYLQNDMSGTTRS 743 Query: 249 VVSLIQERYPQGY 261 + + E YP G Sbjct: 744 MRKYLAE-YPNGK 755 >gi|331672264|ref|ZP_08373055.1| putative tol-pal system protein YbgF [Escherichia coli TA280] gi|331070459|gb|EGI41823.1| putative tol-pal system protein YbgF [Escherichia coli TA280] Length = 263 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 19/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F +++P Sbjct: 116 SGAATSTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ + +++ +Y + K A+ + Sbjct: 228 QDKGDSAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDSAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDSAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|317052374|ref|YP_004113490.1| cell wall hydrolase/autolysin [Desulfurispirillum indicum S5] gi|316947458|gb|ADU66934.1| cell wall hydrolase/autolysin [Desulfurispirillum indicum S5] Length = 628 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 42/121 (34%), Gaps = 19/121 (15%) Query: 117 GEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 E + Y P+S Y G +Y ++ R D + L + RY +S Sbjct: 58 IEGFELFYLNRPDSPLAPEAMYNAGDAYFRLYRLSSKD-YDLEQSLSTFRTLPRRYADSE 116 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE-YVAAIPRFQLVLANYSDAEHAEEAMAR 232 A + GR Y + + A ++ ++ Y ++ A +A+ R Sbjct: 117 KAPDAA--------------FQAGRIYEEEKNDILLAARLYEQLIERYPRSQAAVDALQR 162 Query: 233 L 233 L Sbjct: 163 L 163 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 41/123 (33%), Gaps = 14/123 (11%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQQAASLGEEYITQYP 125 + K E F + P + +A +++ + + +Q+ S +Y Sbjct: 54 WLKVIEGFELFYLNRPDSPLAPEAMYNAGDAYFRLYRLSSKDYDLEQSLSTFRTLPRRYA 113 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 +S+ + G Y + D+ L + +++ERY S A + Sbjct: 114 DSEKAPDAAFQAGRIYEEEKNDI-------LLAARLYEQLIERYPRSQAAVDALQRLDAM 166 Query: 186 RNQ 188 + Sbjct: 167 GDI 169 >gi|262193823|ref|YP_003265032.1| tol-pal system protein YbgF [Haliangium ochraceum DSM 14365] gi|262077170|gb|ACY13139.1| tol-pal system protein YbgF [Haliangium ochraceum DSM 14365] Length = 343 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 28/87 (32%), Gaps = 8/87 (9%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 GK+ A + + ++ YP D Y +G S D++ + L + Sbjct: 233 RDGKHDAAEAGFQAFLDMYPRHDLSDNAQYWLGESLY--------DRKQYREALAAFLAV 284 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAK 192 +R+ V A R L Sbjct: 285 KQRFPRGNKVPDALLKAGFCRIALGEH 311 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 14/133 (10%), Positives = 36/133 (27%), Gaps = 16/133 (12%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +Y + + L++ A F +P ++ + Y +Y++A + Sbjct: 221 PAGLYRRHLEALRDGKHDAAEAGFQAFLDMYPRHDLSDNAQYWLGESLYDRKQYREALAA 280 Query: 117 G----EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + + P V G + ++ ++E + S Sbjct: 281 FLAVKQRF----PRGNKVPDALLKAGFCRIALGEHA--------QARAALAHVIELFPES 328 Query: 173 PYVKGARFYVTVG 185 A + Sbjct: 329 QPAAIAAERLESL 341 Score = 39.3 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 41/128 (32%), Gaps = 22/128 (17%) Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Y + + +RD +D ++ Y A++++ Sbjct: 224 LYRR---HLEALRDGKHD-----AAEAGFQAFLDMYPRHDLSDNAQYWLGESL------- 268 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 R +Y A+ F V + +A+ + +AL +AR ++ + Sbjct: 269 -------YDRKQYREALAAFLAVKQRFPRGNKVPDALLKAGFCRIALGEHAQARAALAHV 321 Query: 254 QERYPQGY 261 E +P+ Sbjct: 322 IELFPESQ 329 >gi|300715891|ref|YP_003740694.1| conserved uncharacterized protein [Erwinia billingiae Eb661] gi|299061727|emb|CAX58843.1| conserved uncharacterized protein [Erwinia billingiae Eb661] Length = 272 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 9/114 (7%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y AV L+++ +A F + +P + + + Y+ GK AA Sbjct: 155 YNAAVALVLEKKQNEQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAT 214 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + YP+S Y VG+ + ++ T ++ + Y NS Sbjct: 215 VVKNYPKSPKSPDALYKVGV--------IMQEKGDTAKAKAVYQQVSKLYPNSD 260 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 16/124 (12%), Positives = 42/124 (33%), Gaps = 14/124 (11%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + +++ + + V++Y +S Y A +++ Sbjct: 151 ANTDYNAAVALVLEKKQNEQAISAFQAFVKKYPDSTYQPNANYWLGQLN----------- 199 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + + +A+ ++ +A+ V + + Y Sbjct: 200 ---YNKGKKDDAAYYFATVVKNYPKSPKSPDALYKVGVIMQEKGDTAKAKAVYQQVSKLY 256 Query: 258 PQGY 261 P Sbjct: 257 PNSD 260 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 1/83 (1%) Query: 46 VYLDSVTDVRY-QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 ++ D Y Y L + A YF +++P + + +L + Sbjct: 177 AFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKNYPKSPKSPDALYKVGVIM 236 Query: 105 YSAGKYQQAASLGEEYITQYPES 127 G +A ++ ++ YP S Sbjct: 237 QEKGDTAKAKAVYQQVSKLYPNS 259 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 22/58 (37%) Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 AI FQ + Y D+ + A L + D+A + + + YP+ + Sbjct: 171 AISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKNYPKSPKSPDA 228 >gi|330502227|ref|YP_004379096.1| TPR repeat-containing protein [Pseudomonas mendocina NK-01] gi|328916513|gb|AEB57344.1| TPR repeat-containing protein [Pseudomonas mendocina NK-01] Length = 209 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 44/136 (32%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D ++ Y+ A +K ++F KA + F +P + A + V + G Sbjct: 82 EPGDPAKEKLYYDAAFDLIKAKDFDKASQAFAAFLNRYPNSQYAGNAQYWLGEVNLAKGD 141 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q A + YP V + + DV + +++ +Y Sbjct: 142 LQAAGQAFAKVSQAYPSHAKVPDSLFKLA--------DVERRLGHNDKARGILQQVIAQY 193 Query: 170 TNSPYVKGARFYVTVG 185 S + A+ + Sbjct: 194 PGSSAAQLAQRDLQRL 209 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 46/119 (38%), Gaps = 14/119 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + Q + + RY NS Y A++++ LA +++ AA Sbjct: 103 KDFDKASQAFAAFLNRYPNSQYAGNAQYWLGEVN--LAKGDLQ------------AAGQA 148 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 F V Y +++ +L + L D+AR ++ + +YP A+ + ++ Sbjct: 149 FAKVSQAYPSHAKVPDSLFKLADVERRLGHNDKARGILQQVIAQYPGSSAAQLAQRDLQ 207 >gi|15644443|ref|NP_229495.1| hypothetical protein TM1695 [Thermotoga maritima MSB8] gi|4982272|gb|AAD36762.1|AE001810_1 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 357 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 83/232 (35%), Gaps = 27/232 (11%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 LD + E+ K L +++ + ++ ++ P ++ Y+ Sbjct: 124 LDIDENYAPAYEL--KGSLLVEQGKIEEGIKFLDKAVEIDP---WLVQAYASLGEAYYNL 178 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD----------VPYDQRATKL 157 G Y++A E + P K Y+++ +Y +M R + D Sbjct: 179 GDYEKAIHYWERELEYNPNDKIT---YFMITEAYYEMNRKDLAVKTLERLLEIDPDNI-P 234 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLV 216 L +S++ N + + + + E+E R LK G Y + + Sbjct: 235 ALYQLSQLYRELGNEEKAREMEEKIMNCKPK-YPTELEPWARVMLKHGRYKEVAEELEKI 293 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + + + A LV YV L +D+ARE++ I + +W Y + Sbjct: 294 VES---SPLNTLARLLLVVPYVKLGQIDKAREILDDIGQ---SNFWYYYGKK 339 >gi|319638157|ref|ZP_07992920.1| periplasmic protein [Neisseria mucosa C102] gi|317400430|gb|EFV81088.1| periplasmic protein [Neisseria mucosa C102] Length = 251 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 50/134 (37%), Gaps = 13/134 (9%) Query: 48 LDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 + S TD Q E+ Y +A + + NFS A + + +AR+++ + Q Sbjct: 121 VPSETDSAAQNELRLYNQAQKYYQRNNFSAAVAILKEADGGN-GSEIARRNMYLLLQSQQ 179 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSR 164 G + +G Y ++ S Y +G + +D+ + Sbjct: 180 RLGNCESVIEIGNRYANRFRNSPQAPDAMYSIGQCQYKLQQKDIAR---------STWRK 230 Query: 165 IVERYTNSPYVKGA 178 +++ + NS K A Sbjct: 231 LMQSFPNSEAAKRA 244 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 19/150 (12%), Positives = 42/150 (28%), Gaps = 48/150 (32%) Query: 170 TNSPYVKGARFYVTVG---------RNQLAAKEVEI---GRYYLKRGEYVAA-------- 209 + + + + + A E+ + + Y +R + AA Sbjct: 100 PKAQRLDDRKLKMNYLANGGGVPSETDSAAQNELRLYNQAQKYYQRNNFSAAVAILKEAD 159 Query: 210 ------IPR---------------FQLVLA-------NYSDAEHAEEAMARLVEAYVALA 241 I R + V+ + ++ A +AM + + L Sbjct: 160 GGNGSEIARRNMYLLLQSQQRLGNCESVIEIGNRYANRFRNSPQAPDAMYSIGQCQYKLQ 219 Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271 D AR + + +P A+ +K Sbjct: 220 QKDIARSTWRKLMQSFPNSEAAKRAAISLK 249 >gi|315287178|gb|EFU46590.1| tol-pal system protein YbgF [Escherichia coli MS 110-3] Length = 233 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F +++P + + + Y+ GK AA Sbjct: 116 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 175 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ T +++ +Y + K A+ Sbjct: 176 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 227 Query: 180 FYVTVG 185 + Sbjct: 228 KRLNAM 233 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ G Sbjct: 112 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 157 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 158 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 217 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 218 PGTDGAKQAQK 228 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 130 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 181 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 182 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 227 Query: 231 ARL 233 RL Sbjct: 228 KRL 230 >gi|225848002|ref|YP_002728165.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium azorense Az-Fu1] gi|225644404|gb|ACN99454.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 921 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 84/213 (39%), Gaps = 26/213 (12%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSL 97 +S D ++ +Y A L+ E NF +A + F F +K+L Sbjct: 532 SARSKLKEIAQQYNDELAKKAMYLYAYLYFSEGNFQQAIKEFENFRNTFKEDDVYNQKAL 591 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 L A Y+ G+ A S+ +E+I +Y + K Y ++ +Q K Sbjct: 592 LRIADSYYNLGEKDLARSIYKEFIEKYKDRKEAVDAAY-----NLVLLETKGENQEKDK- 645 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + + +Y + P N L ++++ Y ++GE AI +Q + Sbjct: 646 ---IIEDFISKYPDYP-----------LVNTL---KLQLASIYEEKGEIEKAIKIYQQL- 687 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 + S+ + + A +L E Y D+A+E++ Sbjct: 688 -SNSNDKDSLLAKYKLAEIYEKSGQNDKAKEIL 719 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 62/191 (32%), Gaps = 39/191 (20%) Query: 99 MSAFVQ-----YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 A+ + Y + + + P Y+ +S D + Sbjct: 462 DLAYNYLGWYFFKNKDY---LNAYKSFKD--P---------YMKAVSLFNYG-----DVQ 502 Query: 154 ATKLMLQYMSRIVERYTNSPYVK-------GARFYVTVG----RNQLAAKEVEI-GRYYL 201 K ++ + + S Y+ AR + ++LA K + + Y Sbjct: 503 KAKELINGRNDRKSLF-LSAYIDIKQGDLESARSKLKEIAQQYNDELAKKAMYLYAYLYF 561 Query: 202 KRGEYVAAIPRFQLVLANYS-DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 G + AI F+ + D + ++A+ R+ ++Y L D AR + E+Y Sbjct: 562 SEGNFQQAIKEFENFRNTFKEDDVYNQKALLRIADSYYNLGEKDLARSIYKEFIEKYKDR 621 Query: 261 YWARY-VETLV 270 A LV Sbjct: 622 KEAVDAAYNLV 632 Score = 35.5 bits (81), Expect = 9.0, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 20/40 (50%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + G + A ++++ +Y + K + Y YYL+G + Sbjct: 102 YFQRGDFIFAQENLKKFVEKYKDHKYLFYAYYLLGYINFE 141 >gi|213422409|ref|ZP_03355475.1| hypothetical protein Salmonentericaenterica_33610 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 124 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F + +P + + + Y+ GK AA Sbjct: 7 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 66 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S Y VG+ + D+ T +++ +Y + K A+ Sbjct: 67 VVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQ 118 Query: 180 FYVTVG 185 + Sbjct: 119 KRLNAM 124 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + +++Y +S Y A +++ Sbjct: 3 ANTDYNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN----------- 51 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 52 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKY 108 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 109 PGTDGAKQAQK 119 Score = 43.6 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I +YP+S Y +G + Y + +V+ Y Sbjct: 21 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 72 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A + V V +G+ A +Q V+ Y + A++A Sbjct: 73 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 118 Query: 231 ARL 233 RL Sbjct: 119 KRL 121 >gi|220907546|ref|YP_002482857.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 7425] gi|219864157|gb|ACL44496.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425] Length = 373 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 72/211 (34%), Gaps = 30/211 (14%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 +T+ S A+ L + ++ E + +A +++ A +Q Sbjct: 17 VMTMIQSQAMAALPIVPTNAMTSNQPVLISKQISAEEFFGQAKAKYAREDYQGAIAAVDQ 76 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 R P A + LM +Q G YQ+A + ++ I P + + Y++ G Sbjct: 77 AIRLNP--NYAE-AYLMRGSIQTELGNYQEAIADLDQGIKLNPNNAS---AYFIRG---- 126 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY--- 199 + + + L ++++ Y N R + + + L I + Sbjct: 127 ----SIQLESGNLQGALADYNQVIRLYPNEANAYFIRGAIQLQLDNLQG---AIADFNRG 179 Query: 200 ----------YLKRGEYVAAIPRFQLVLANY 220 Y RG A + +Q +A++ Sbjct: 180 IKLNPNEAKAYFIRGTIQAGLGNYQEAIADF 210 >gi|218961725|ref|YP_001741500.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] gi|167730382|emb|CAO81294.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] Length = 552 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 45/145 (31%), Gaps = 16/145 (11%) Query: 61 YEKAVLFL-----KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 Y +A L F +A Y +P + A A + A + Sbjct: 309 YIEAKTRLAFLLYDHNRFEEAIPYLEAIFDKYPENEL---VSTRLANAYQKANRLDDAIA 365 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT----KLMLQYMSRIVERYTN 171 E I P++ YL ++ ++ D A K + ++ ++ N Sbjct: 366 KYENTIKNNPQNTMA----YLSAVNLYRLKATQTSDPAAVAAINKNAIDILNALITNQPN 421 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEI 196 + + + +N+L E+ Sbjct: 422 NAIAYMNMAAIYLSQNKLQEAELYA 446 Score = 35.9 bits (82), Expect = 6.4, Method: Composition-based stats. Identities = 33/235 (14%), Positives = 66/235 (28%), Gaps = 46/235 (19%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++Y A+ N+++A + P + + V Y GK +QA Sbjct: 176 NKIYNIALNNYANGNYAEAEKNLVFALGLNP---DLKDAYYYLGSVYYKQGKLEQAIQNL 232 Query: 118 EEYITQYPESKN-----VD-Y-----------VYYLVGMSYAQ-----MIRDVPYDQRAT 155 E + + P+ +D Y + I ++ +Q Sbjct: 233 ELNLEKNPQHTQTLAILIDIYEKTNQTNKRLNAMEKLATINENEELWLTIANLYSEQNNI 292 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + + + +E N A+ + + AIP + Sbjct: 293 AKAEEALQKALELNPN---YIEAKTRLAFLL--------------YDHNRFEEAIPYLEA 335 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETL 269 + Y + E RL AY +D+A + + I+ L Sbjct: 336 IFDKYPENELVS---TRLANAYQKANRLDDAIAKYENTIKNNPQNTMAYLSAVNL 387 >gi|159185872|ref|NP_356908.2| hypothetical protein Atu3712 [Agrobacterium tumefaciens str. C58] gi|159141006|gb|AAK89693.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 329 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 51/144 (35%), Gaps = 14/144 (9%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 + +R + + + ++Y+ A + ++ A + F Q + +P Sbjct: 179 SGSLPGVTTGNGTRKTDPVNTAALTSEGDIYQAAYGHVLSGDYKLAEQGFQQYLQGYPKG 238 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE---SKNVDYVYYLVGMSYAQMIRD 147 A + QYS GK+ +A + ++ + S + +GMS A + Sbjct: 239 TKAADASFWLGEAQYSQGKFNEA---AKTFLNGHQTYGKSPKAPEMLMKLGMSLAALDN- 294 Query: 148 VPYDQRATKLMLQYMSRIVERYTN 171 T+ + + +RY N Sbjct: 295 -------TETACATLREVPKRYPN 311 Score = 42.8 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 36/109 (33%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 KL Q + ++ Y A F++ + +G++ A Sbjct: 219 GDYKLAEQGFQQYLQGYPKGTKAADASFWLGEAQ--------------YSQGKFNEAAKT 264 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 F Y + A E + +L + AL + A + + +RYP Sbjct: 265 FLNGHQTYGKSPKAPEMLMKLGMSLAALDNTETACATLREVPKRYPNAS 313 >gi|327481489|gb|AEA84799.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 270 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 46/130 (35%), Gaps = 8/130 (6%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D ++ Y+ A +K ++F KA + F R +P + A + V + G Q Sbjct: 147 DPAQEKLYYDAAFDLIKAKDFDKASQAFAAFLRKYPESQYAGNAQYWLGEVNLAKGDLQG 206 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A YP+ V Y + DV + +++ +Y N+ Sbjct: 207 AGQAFARVSQAYPQHSKVPDSLYKLA--------DVEIRMGNRDKAQGILRQVIAQYPNT 258 Query: 173 PYVKGARFYV 182 + A+ + Sbjct: 259 SAAQLAQRQL 268 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 40/109 (36%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + Q + + +Y S Y A++++ LA +++ A Sbjct: 165 KDFDKASQAFAAFLRKYPESQYAGNAQYWLGEVN--LAKGDLQ------------GAGQA 210 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 F V Y +++ +L + + + D+A+ ++ + +YP Sbjct: 211 FARVSQAYPQHSKVPDSLYKLADVEIRMGNRDKAQGILRQVIAQYPNTS 259 >gi|291526081|emb|CBK91668.1| Tetratricopeptide repeat [Eubacterium rectale DSM 17629] Length = 320 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 77/244 (31%), Gaps = 36/244 (14%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 ALT+ + L G D D R+ + ++ ++ A + F Sbjct: 7 MALTLTVVLTAGMLTGCGSG-------DKAKDKDAYRQY---GINCIENGSYDDAVDAFQ 56 Query: 82 QCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + + A L + QY +G A I +K+ D YYL Sbjct: 57 KALDQSVGSVGAE--ELDICYYKAKAQYLSGDVDGAIDTYTAIID---YNKDSD-AYYLR 110 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERY-----TNSPYV--KGARFYVT---VGRN 187 G Y D + K L E Y T S Y + Y+ + Sbjct: 111 GCIYFAK-NDSDKGLKDFKTALSENDDNYELYLGVYETLSKYGMNDQGKEYLDNALKLKA 169 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 + A ++ GR Y G+Y +AI Q + E +A + E Y D ++ Sbjct: 170 KTADDYMQRGRIYTMLGDYDSAIKSLQKAID-----EKLVKANYYMGEVYQKKGDNDSSQ 224 Query: 248 EVVS 251 + Sbjct: 225 KYFK 228 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 7/76 (9%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ + N+ A YF + ++ +G + A S Sbjct: 240 DLMNMGQAQMDNGNYDTAITYFQNALELESV----PNKQQITKAMIIAYEYSGDFATAKS 295 Query: 116 LGEEYITQYPESKNVD 131 EEY+ YP+ ++ Sbjct: 296 KMEEYMKDYPDDEDAA 311 >gi|226330925|ref|ZP_03806443.1| hypothetical protein PROPEN_04848 [Proteus penneri ATCC 35198] gi|225201720|gb|EEG84074.1| hypothetical protein PROPEN_04848 [Proteus penneri ATCC 35198] Length = 110 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 45/115 (39%), Gaps = 8/115 (6%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 + +++ KA N ++P + + + Y G QAAS + YP+S Sbjct: 1 MNSKDYDKAIVELNNFINNYPKSSYQSNAQFWLGQMYYLKGNKDQAASTFAIVVKNYPKS 60 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + +Y +G+ + ++ +++++Y NS K A+ + Sbjct: 61 QKASEAFYKIGL--------IMQEKGQKDNAKAVYQQVIKQYPNSAGAKLAQKQL 107 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 14/116 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + + ++ + Y S Y A+F++ YYLK + AA Sbjct: 4 KDYDKAIVELNNFINNYPKSSYQSNAQFWLGQM-------------YYLKGNKDQAAST- 49 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 F +V+ NY ++ A EA ++ D A+ V + ++YP A+ + Sbjct: 50 FAIVVKNYPKSQKASEAFYKIGLIMQEKGQKDNAKAVYQQVIKQYPNSAGAKLAQK 105 Score = 38.9 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 24/61 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + +Y AI + NY + + A L + Y D+A +++ + YP+ Sbjct: 1 MNSKDYDKAIVELNNFINNYPKSSYQSNAQFWLGQMYYLKGNKDQAASTFAIVVKNYPKS 60 Query: 261 Y 261 Sbjct: 61 Q 61 >gi|239832780|ref|ZP_04681109.1| tol-pal system protein YbgF [Ochrobactrum intermedium LMG 3301] gi|239825047|gb|EEQ96615.1| tol-pal system protein YbgF [Ochrobactrum intermedium LMG 3301] Length = 550 Score = 55.5 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 49/124 (39%), Gaps = 8/124 (6%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 + S+ +Y+ + +L ++ A F + + +P ++ Y Sbjct: 417 VASLPTDDNPSSLYQASYQYLMSGDYKAAETGFREHVKRYPADPSTAEARFWLGESLYGQ 476 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G+Y +AA++ + YP+SK + +GM+ +M D + ++I E Sbjct: 477 GRYSEAATVFIDTQRDYPDSKRAPENMFKLGMTLEKMDN---RD-----VACATFAQIPE 528 Query: 168 RYTN 171 RY Sbjct: 529 RYPK 532 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 3/79 (3%) Query: 194 VEIGRY-YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 + Y YL G+Y AA F+ + Y EA L E+ EA V Sbjct: 429 LYQASYQYLMSGDYKAAETGFREHVKRYPADPSTAEARFWLGESLYGQGRYSEAATVFID 488 Query: 253 IQERYPQGYWARYVETLVK 271 Q YP R E + K Sbjct: 489 TQRDYPDSK--RAPENMFK 505 Score = 38.9 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 36/107 (33%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY P ARF++ +G Y A Sbjct: 440 GDYKAAETGFREHVKRYPADPSTAEARFWLGESL--------------YGQGRYSEAATV 485 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F +Y D++ A E M +L + D A + I ERYP+ Sbjct: 486 FIDTQRDYPDSKRAPENMFKLGMTLEKMDNRDVACATFAQIPERYPK 532 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 31/98 (31%), Gaps = 8/98 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + +G Y+ A + E++ +YP + + +G S R Sbjct: 434 YQYLMSGDYKAAETGFREHVKRYPADPSTAEARFWLGESLYGQGRYS--------EAATV 485 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y +S F + + ++ ++V + Sbjct: 486 FIDTQRDYPDSKRAPENMFKLGMTLEKMDNRDVACATF 523 >gi|324020374|gb|EGB89593.1| tol-pal system protein YbgF [Escherichia coli MS 117-3] Length = 244 Score = 55.5 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F +++P Sbjct: 97 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 156 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 157 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 208 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 209 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 244 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ Sbjct: 123 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 171 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 172 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 228 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 229 PGTDGAKQAQK 239 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 141 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 192 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 193 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 238 Query: 231 ARL 233 RL Sbjct: 239 KRL 241 >gi|197118979|ref|YP_002139406.1| lytic transglycosylase domain-containing protein [Geobacter bemidjiensis Bem] gi|197088339|gb|ACH39610.1| lytic transglycosylase domain protein [Geobacter bemidjiensis Bem] Length = 709 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 51/142 (35%), Gaps = 22/142 (15%) Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 DY Y G+S A++ R +DQ L + R+++ Y S V+ A + + + L Sbjct: 92 ADYALYYQGLSLAKLER---HDQ-----ALTPLYRLLKHYPESRLVRAA---LILYADTL 140 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AA G Y A + + Y + A+ L A +V Sbjct: 141 AA-----------AGHYNEAQQSYATFVERYPSGSDSISALYGSALCKEKLGDPIAAAKV 189 Query: 250 VSLIQERYPQGYWARYVETLVK 271 + I YP ++ ++ Sbjct: 190 LRGIYLNYPASSFSDKSARDLQ 211 Score = 39.3 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 56/165 (33%), Gaps = 8/165 (4%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K + +A L WE +++ + +Y + + K + +A Sbjct: 57 KGVRSFMVGMAAARLEQWEEAAAQLPAAAEGYPILADYALYYQGLSLAKLERHDQALTPL 116 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + + +P + + R +L++ A +AG Y +A ++ +YP + Y + Sbjct: 117 YRLLKHYPESRLVRAALILYADTLAAAGHYNEAQQSYATFVERYPSGSDSISALYGSALC 176 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 ++ + + + I Y S + + + Sbjct: 177 KEKLGDPI--------AAAKVLRGIYLNYPASSFSDKSARDLQRL 213 >gi|85058866|ref|YP_454568.1| hypothetical protein SG0888 [Sodalis glossinidius str. 'morsitans'] gi|84779386|dbj|BAE74163.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 246 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 45/126 (35%), Gaps = 9/126 (7%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y +AV L+++ + +A F + +P + + + Y+ G+ AA Sbjct: 129 YNEAVALVLEKKQYDQAISAFQSFVKRYPDSTYQPNANYWLGQLNYNQGEKDDAAYYFAL 188 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S VG+ + ++ ++ + Y ++ K A+ Sbjct: 189 VVKNYPKSPKASDALLKVGV--------IMQEKGQKDKARAVYQQVGKLYPSAEAAKQAQ 240 Query: 180 FYVTVG 185 + Sbjct: 241 KRLAGL 246 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 14/112 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + V+RY +S Y A +++ K+ YY F LV Sbjct: 144 QAISAFQSFVKRYPDSTYQPNANYWLGQLNYNQGEKDD--AAYY------------FALV 189 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + NY + A +A+ ++ D+AR V + + YP A+ + Sbjct: 190 VKNYPKSPKASDALLKVGVIMQEKGQKDKARAVYQQVGKLYPSAEAAKQAQK 241 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 43/127 (33%), Gaps = 22/127 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y QA S + ++ +YP+S Y +G Q Y + +V+ Sbjct: 140 KQYDQAISAFQSFVKRYPDSTYQPNANYWLGQLNYN--------QGEKDDAAYYFALVVK 191 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y SP A V V + K+ Y Q V Y AE A+ Sbjct: 192 NYPKSPKASDALLKVGVIMQEKGQKDKARAVY--------------QQVGKLYPSAEAAK 237 Query: 228 EAMARLV 234 +A RL Sbjct: 238 QAQKRLA 244 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 28/66 (42%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ +Y AI FQ + Y D+ + A L + D+A +L+ + YP+ Sbjct: 137 LEKKQYDQAISAFQSFVKRYPDSTYQPNANYWLGQLNYNQGEKDDAAYYFALVVKNYPKS 196 Query: 261 YWARYV 266 A Sbjct: 197 PKASDA 202 >gi|206576794|ref|YP_002239636.1| tol-pal system protein YbgF [Klebsiella pneumoniae 342] gi|288936477|ref|YP_003440536.1| tol-pal system protein YbgF [Klebsiella variicola At-22] gi|290510466|ref|ZP_06549836.1| hypothetical protein HMPREF0485_02236 [Klebsiella sp. 1_1_55] gi|206565852|gb|ACI07628.1| tol-pal system protein YbgF [Klebsiella pneumoniae 342] gi|288891186|gb|ADC59504.1| tol-pal system protein YbgF [Klebsiella variicola At-22] gi|289777182|gb|EFD85180.1| hypothetical protein HMPREF0485_02236 [Klebsiella sp. 1_1_55] Length = 266 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 41/126 (32%), Gaps = 9/126 (7%) Query: 61 YEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ + A F + +P + + + Y+ GK AA Sbjct: 148 YNAAIALVKDASRQDDAMVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAFYFAS 207 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ T +++ ++ + K A+ Sbjct: 208 VVKNYPKSPKAPDAMFKVGV--------IMQDKGDTAKAKAVYQQVISKFPGTDGAKQAQ 259 Query: 180 FYVTVG 185 + Sbjct: 260 KRLNAL 265 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D + V++Y +S Y A +++ Sbjct: 144 ANTDYNAAIALVKDASRQDDAMVAFQNFVKKYPDSTYQPNANYWLGQLN----------- 192 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 Y K + AA F V+ NY + A +AM ++ +A+ V + ++ Sbjct: 193 --YNKGKKDDAAFY-FASVVKNYPKSPKAPDAMFKVGVIMQDKGDTAKAKAVYQQVISKF 249 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 250 PGTDGAKQAQK 260 >gi|313672749|ref|YP_004050860.1| tol-pal system protein ybgf [Calditerrivibrio nitroreducens DSM 19672] gi|312939505|gb|ADR18697.1| tol-pal system protein YbgF [Calditerrivibrio nitroreducens DSM 19672] Length = 254 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 53/148 (35%), Gaps = 11/148 (7%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 + S++ D++ D +Y A+ K + ++ + F + FP +A S Sbjct: 112 SSQSDSNKVYIEDNIADKAT---LYNLAMELYKSGRYEESIDKFRSFTVRFPSDSLADNS 168 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L + ++AA I YP+ V Y +G++ ++ + Sbjct: 169 LYWMGESYLNLNNLEKAAESFRNVIENYPQENKVPDAMYKLGVTLDKLGKR--------N 220 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTV 184 + + +++ + S A+ + Sbjct: 221 EAVDILKKLILNFKYSDIANTAKSKLIE 248 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 34/107 (31%), Gaps = 16/107 (14%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-IGRYYLKRGEYVAAIPRFQ 214 + + R+ + + LA + +G YL A F+ Sbjct: 146 EESIDKFRSFTVRFPS---------------DSLADNSLYWMGESYLNLNNLEKAAESFR 190 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 V+ NY +AM +L L +EA +++ + + Sbjct: 191 NVIENYPQENKVPDAMYKLGVTLDKLGKRNEAVDILKKLILNFKYSD 237 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 39/107 (36%), Gaps = 21/107 (19%) Query: 170 TNS--PYVKGARFYV---------TVGRNQLAAKEVEIGRYY------LKRGEYVAAIPR 212 S V+ + + + +A K Y K G Y +I + Sbjct: 96 PQSKAQKVEQVQQKIQSSQSDSNKVYIEDNIADK----ATLYNLAMELYKSGRYEESIDK 151 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F+ + A+ ++ + E+Y+ L +++A E + E YPQ Sbjct: 152 FRSFTVRFPSDSLADNSLYWMGESYLNLNNLEKAAESFRNVIENYPQ 198 >gi|56460186|ref|YP_155467.1| TPR repeat-containing protein [Idiomarina loihiensis L2TR] gi|56179196|gb|AAV81918.1| Uncharacterized conserved protein, contains TPR repeats [Idiomarina loihiensis L2TR] Length = 253 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 52/138 (37%), Gaps = 9/138 (6%) Query: 46 VYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 S + + + Y+KA+ L+++ + +A F ++FP + + + + Sbjct: 122 TDNSSYSPNLSENDAYDKAIALVLEDKRYDEAIPAFESFLKNFPNSTYSPNAHYWLGQLF 181 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++ +Y QA E + YP+S +G ++ + Y + Sbjct: 182 FAKRQYDQAKQQFETVVNDYPDSNKRGDCLLKLGAIASEQDKSAD--------AKAYYQQ 233 Query: 165 IVERYTNSPYVKGARFYV 182 ++E Y S A+ + Sbjct: 234 VIEEYPESTEANLAKQRL 251 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 42/128 (32%), Gaps = 22/128 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +Y +A E ++ +P S +Y +G + + YDQ Q + Sbjct: 146 EDKRYDEAIPAFESFLKNFPNSTYSPNAHYWLGQLFFAKRQ---YDQ-----AKQQFETV 197 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V Y +S + + ++ + A +Q V+ Y ++ Sbjct: 198 VNDYPDSNKRGDCLLKLGAIAS--------------EQDKSADAKAYYQQVIEEYPESTE 243 Query: 226 AEEAMARL 233 A A RL Sbjct: 244 ANLAKQRL 251 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 39/104 (37%), Gaps = 14/104 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + ++ + NS Y A +++ ++ KR +Y A +F+ V Sbjct: 152 EAIPAFESFLKNFPNSTYSPNAHYWLGQL-------------FFAKR-QYDQAKQQFETV 197 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + +Y D+ + + +L +A+ + E YP+ Sbjct: 198 VNDYPDSNKRGDCLLKLGAIASEQDKSADAKAYYQQVIEEYPES 241 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 43/135 (31%), Gaps = 21/135 (15%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK-----GARFYVTVGRNQLAAKEVEI 196 ++ + ++ + NS Y A Sbjct: 95 FSNLKSSNNQSETAGNDYNSLEQVPTQTDNSSYSPNLSENDAYDKAIALV---------- 144 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 L+ Y AIP F+ L N+ ++ ++ A L + + A D+A++ + Sbjct: 145 ----LEDKRYDEAIPAFESFLKNFPNSTYSPNAHYWLGQLFFAKRQYDQAKQQFETVVND 200 Query: 257 YPQGYWARYVETLVK 271 YP + + L+K Sbjct: 201 YPDSN--KRGDCLLK 213 >gi|17158736|ref|NP_478247.1| hypothetical protein all7600 [Nostoc sp. PCC 7120] gi|17134685|dbj|BAB77243.1| all7600 [Nostoc sp. PCC 7120] Length = 225 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 58/181 (32%), Gaps = 21/181 (11%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K+ + + L+G + +E Y + V L++ NF+ A F Sbjct: 2 KYIKRTVAILGITSLLGVMPAAVSAREAQIPLKATNFQEYYNQGVQKLEQGNFNGAIADF 61 Query: 81 NQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 N + P + G + L S + A S + P+ + Y G Sbjct: 62 NSVVQMNPRFYEGFCLRGLAKS-----QLRDFSAAISDFNLALRLNPKHTD---AYNGRG 113 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY ++ + + ++ V+ NS + + + + + I Sbjct: 114 ISYVEL--------GDFQKAIADFNQTVKIDPNSQ---DGYYNLGLAHFRQGNHQQAIAD 162 Query: 199 Y 199 + Sbjct: 163 F 163 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 40/107 (37%), Gaps = 14/107 (13%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + + +++ +F KA FNQ + P + + + G +QQA + + + Sbjct: 112 RGISYVELGDFQKAIADFNQTVKIDPNS---QDGYYNLGLAHFRQGNHQQAIADFNKALQ 168 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 P N+ Y G++ + +K + + + + + Sbjct: 169 INP---NLADAYGNRGLAQYAL--------GDSKSAVTDLQQAAKLF 204 >gi|293368722|ref|ZP_06615327.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f] gi|292636187|gb|EFF54674.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f] Length = 1005 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 72/218 (33%), Gaps = 36/218 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-------YQQA 113 Y + +++++A YF + + + A G +++A Sbjct: 513 YNLGYIAFHRKDYTQASNYFQK----YVQLEKGENAT-ALADAYNRIGDCHLHVRNFEEA 567 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + S DY +Y + + + ++R+V +Y SP Sbjct: 568 KQYYSQAEQMNTSS--GDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPASP 617 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y A E GR Y+ AI F+ +L Y ++ + +A A + Sbjct: 618 YAVNAI--------------YEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEI 663 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Y ++A E + E+YP AR +K Sbjct: 664 GLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 34/80 (42%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +YEK ++ N ++A F + +P + V+RK+ + Y G Y Sbjct: 614 PASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDY 673 Query: 111 QQAASLGEEYITQYPESKNV 130 QA ++ I +YP S+ Sbjct: 674 NQAIEAYKQVIEKYPGSEEA 693 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 75/267 (28%), Gaps = 55/267 (20%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 +C + D T +Y++ +E+N++ A + P A Sbjct: 9 ICAAICCTPIIGFAQTGDKFTST---DNLYKEGKELFQEKNYAAALPALKAFVKQKPVAS 65 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--------- 142 + + + M Y + L +Y+ +YP++ + +Y L+ Y Sbjct: 66 LLQDAEYMLVSSAYELKDKNR-IELLRKYLDRYPDTPYANRIYALLASCYFYEGKYDEAL 124 Query: 143 --------QMIRDVPYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYV 182 ++ + D + + + Y K +Y+ Sbjct: 125 ALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYL 182 Query: 183 TVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + R I Y + Y A Q L+ Y + Sbjct: 183 SYIRYTQKRYSEALKGFLPLQDDSKYKALVPYYIAEIYTQLKNYDKAQIVAQNYLSAYPN 242 Query: 223 AEHAEEAMARLVEAYVALALMDEAREV 249 EHA E L +AY +A E Sbjct: 243 NEHAAEMYRILGDAYYHFGQYHQAVEA 269 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 47/125 (37%), Gaps = 8/125 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A++ +++++ N+ +P + A ++ QA + +E Sbjct: 587 YQLALVSGLQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKEL 646 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +T+YPES +G+ Y Q ++ +++E+Y S + A Sbjct: 647 LTKYPESPVSRKAAAEIGLLYYQK--------GDYNQAIEAYKQVIEKYPGSEEARLAMR 698 Query: 181 YVTVG 185 + Sbjct: 699 DLKSI 703 Score = 43.2 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 77/220 (35%), Gaps = 36/220 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A ++ + +N+ KA +P A + + Y G+Y QA Y Sbjct: 214 YYIAEIYTQLKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEAFNNY 273 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + + + D Y++G+SY Q + + + ++ N + A Sbjct: 274 LNKDRSAPRRD-ALYMLGLSYYQT--------KVYSKAAETLGKVTTD--NDALTQNAYL 322 Query: 181 YVTVGRNQLAAK---------------EVEI---GRYYL-------KRGEYVAAIPRFQL 215 ++ + QLA K ++I Y + ++ F+ Sbjct: 323 HMGLSYLQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFSAFGESVTAFEK 382 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 L + + +AE+ + LVE Y+ D A + + I + Sbjct: 383 FLNEFPTSPYAEKVSSYLVEVYMNTRSYDAALKSIDRIAK 422 Score = 42.8 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 28/190 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A +LK N +A +F + P A+ ++++Y+ +Y +A + + Sbjct: 145 YQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYLSYIRYTQKRYSEAL---KGF 199 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +SK V Y + Y Q+ + + Y N+ + Sbjct: 200 LPLQDDSKYKALVPYYIAEIYTQL--------KNYDKAQIVAQNYLSAYPNNEHAAEMYR 251 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + G Y G+Y A+ F L + +A+ L +Y Sbjct: 252 IL--------------GDAYYHFGQYHQAVEAFNNYLNK-DRSAPRRDALYMLGLSYYQT 296 Query: 241 ALMDEAREVV 250 + +A E + Sbjct: 297 KVYSKAAETL 306 Score = 35.9 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 50/167 (29%), Gaps = 22/167 (13%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + YL+ + +Y + + + + +SKA E + + D + + + L Sbjct: 271 NNYLNKDRSAPRRDALYMLGLSYYQTKVYSKAAETLGKVTTDN--DALTQNAYLHMGLSY 328 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + +A E+ + + Y + + A + + Sbjct: 329 LQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFS------AFGESVTAFEK 382 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + SPY + Y+ Y+ Y AA+ Sbjct: 383 FLNEFPTSPYAEKVSSYLVEV--------------YMNTRSYDAALK 415 >gi|78224418|ref|YP_386165.1| hypothetical protein Gmet_3227 [Geobacter metallireducens GS-15] gi|78195673|gb|ABB33440.1| conserved hypothetical protein [Geobacter metallireducens GS-15] Length = 996 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 1/69 (1%) Query: 194 VEIGRYY-LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 V I + ++ +Y AI R + VL Y D + A+ L A +A +S Sbjct: 39 VFIAGFNAYQKKDYQTAIERMKTVLEKYPDTPLRDMAIFWLARANFKAGFERDAARYMSQ 98 Query: 253 IQERYPQGY 261 + YP Sbjct: 99 FMKEYPDSP 107 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 38/110 (34%), Gaps = 6/110 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + F F + C ++ + +V+ +++++ A E Sbjct: 4 MKYFRTAAFRCLTGCLIIASLLST------PVYAVNSDDSQVFIAGFNAYQKKDYQTAIE 57 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 +P + ++ A + AG + AA +++ +YP+S Sbjct: 58 RMKTVLEKYPDTPLRDMAIFWLARANFKAGFERDAARYMSQFMKEYPDSP 107 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 8/69 (11%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y YQ A + + +YP++ D + + + + D +YMS+ Sbjct: 47 YQKKDYQTAIERMKTVLEKYPDTPLRDMAIFWLARANFKA--GFERD------AARYMSQ 98 Query: 165 IVERYTNSP 173 ++ Y +SP Sbjct: 99 FMKEYPDSP 107 >gi|324010379|gb|EGB79598.1| tol-pal system protein YbgF [Escherichia coli MS 60-1] Length = 244 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F +++P + + + Y+ GK AA Sbjct: 127 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 186 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ T +++ +Y + K A+ Sbjct: 187 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 238 Query: 180 FYVTVG 185 + Sbjct: 239 KRLNAM 244 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ Sbjct: 123 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 171 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 172 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 228 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 229 PGTDGAKQAQK 239 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 141 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 192 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 193 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 238 Query: 231 ARL 233 RL Sbjct: 239 KRL 241 >gi|218960841|ref|YP_001740616.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] gi|167729498|emb|CAO80409.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] Length = 834 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 30/171 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y +A + I+ + K V+ YYL+ S +V Sbjct: 51 DEYTKAIKKCGKIISTDKKGKRVEEAYYLMAKSLYYKGNS-------AFQAKDQFQNLVI 103 Query: 168 RYTNSPYVKGARFYV------------------TVGRNQLAAKE----VEI-GRYYLKRG 204 R+ +S YV A Y+ RN K + + + +K Sbjct: 104 RFPDSKYVPEAYIYIAKILRETNQPKEAEKLLDEFLRNPKYRKHHPEALFVLADFAIKDK 163 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 +++ A + ++ + + EA + Y D++ E +Q+ Sbjct: 164 DFIKAQHYLERIITEFPKTKEYREAYFLFGKNYYEQKDYDKSLEAFKKMQK 214 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 83/251 (33%), Gaps = 42/251 (16%) Query: 38 WERQSSRDVYLDSVTDVRY--QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 + S D V + Y + +Y K + ++ F FP + + Sbjct: 60 CGKIISTDKKGKRVEEAYYLMAKSLYYKGNSAFQAKD------QFQNLVIRFPDSKYVPE 113 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 + + A + + ++A L +E++ P+ K+ +++ D + Sbjct: 114 AYIYIAKILRETNQPKEAEKLLDEFLR-NPKYRKHHPEALFVLA--------DFAIKDKD 164 Query: 155 TKLMLQYMSRIVERYTNSPYVKGA--------RFYVTVGRNQLAAKEVEIGR-------- 198 Y+ RI+ + + + A ++ A K+++ R Sbjct: 165 FIKAQHYLERIITEFPKTKEYREAYFLFGKNYYEQKDYDKSLEAFKKMQKARGIDKTIKL 224 Query: 199 ---YY-----LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 YY L+ G+ A+ + ++ + S + A AL EAR + Sbjct: 225 EGTYYIGLNELELGQAEKALKTAKGLIKSESRPDKIPFVRLLKARAQFALGDTTEARTEI 284 Query: 251 SLIQERYPQGY 261 I + YP+ Sbjct: 285 EFITKNYPRTE 295 >gi|152969310|ref|YP_001334419.1| tol-pal system protein YbgF [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893778|ref|YP_002918512.1| tol-pal system protein YbgF [Klebsiella pneumoniae NTUH-K2044] gi|262041198|ref|ZP_06014410.1| hypothetical protein HMPREF0484_1426 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|329998742|ref|ZP_08303196.1| tol-pal system protein YbgF [Klebsiella sp. MS 92-3] gi|150954159|gb|ABR76189.1| putative periplasmic protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546094|dbj|BAH62445.1| putative periplasmic protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259041427|gb|EEW42486.1| hypothetical protein HMPREF0484_1426 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328538569|gb|EGF64673.1| tol-pal system protein YbgF [Klebsiella sp. MS 92-3] Length = 264 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 41/126 (32%), Gaps = 9/126 (7%) Query: 61 YEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ + A F + +P + + + Y+ G+ AA Sbjct: 146 YNAAIALVKDASRQDDAMVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGRKDDAAFYFAS 205 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ T +++ ++ + K A+ Sbjct: 206 VVKNYPKSPKAPDAMFKVGV--------IMQDKGDTAKAKAVYQQVINKFPGTDGAKQAQ 257 Query: 180 FYVTVG 185 + Sbjct: 258 KRLNAL 263 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D + V++Y +S Y A +++ Sbjct: 142 ANTDYNAAIALVKDASRQDDAMVAFQNFVKKYPDSTYQPNANYWLGQLN----------- 190 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 Y K + AA F V+ NY + A +AM ++ +A+ V + ++ Sbjct: 191 --YNKGRKDDAAFY-FASVVKNYPKSPKAPDAMFKVGVIMQDKGDTAKAKAVYQQVINKF 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 >gi|37520090|ref|NP_923467.1| transglycosylase [Gloeobacter violaceus PCC 7421] gi|35211082|dbj|BAC88462.1| gll0521 [Gloeobacter violaceus PCC 7421] Length = 667 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 41/264 (15%), Positives = 77/264 (29%), Gaps = 42/264 (15%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR--EVYEKAVLFLKEQNFS 74 ++ L I S+A + W + + Q Y + +++ Sbjct: 6 FRFKTRTLLIAASLAGALGLAWVAFPKPPTEDSPLVALSSQDRSGRYRRGSAAFVRGDYA 65 Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 +A + +P +A + L A A+ G ++ +P+S V Sbjct: 66 EARRQLAGLAASYP--ALAERIGLKLAV----------ASGEGRRWLEAHPKSPLVPDAL 113 Query: 135 YLVG-------MSYAQMIRDVPYDQRATKLML-------QYMSRIVERYTNSPYVKGARF 180 L+ + D + A + L ++ R+ S Sbjct: 114 ALLARQDRAALLPLLNGYPDHYRTREALERALVRDPDDHTLAGALLARFPESTLAYAMAT 173 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR---FQLVLANYSDAEHAEEAMARLVEAY 237 E+ + L VA+I R + LA Y A E + Sbjct: 174 RREKI------GELSPAEWQL-----VASIYRRVNAKQALAAYERAPATPENLLERARLQ 222 Query: 238 VALALMDEAREVVSLIQERYPQGY 261 L ARE+ L+ R+P+ Sbjct: 223 RKLGDKPAARELYELVLRRFPESP 246 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 76/212 (35%), Gaps = 35/212 (16%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + E+A L K + A E + R FP + + +L +AF + + Sbjct: 211 TPENLLERARLQRKLGDKPAARELYELVLRRFPESPL----VLDAAF------ERAELLG 260 Query: 116 LGEEYITQYP----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 GE + P ++ D V + A ++ + R+VERY Sbjct: 261 AGEAFAALEPWERASAERGDEVL-------WARSQIAARRLDAPEMAIPLYRRLVERYPQ 313 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 S A + +LAA+ +RG AA + ++ N+ A +A Sbjct: 314 SAKAPNAAW-------ELAAQS-------AERGNTGAARSYARWLVRNHPADPFAPKAAF 359 Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 L + EAR + +RYP+ Y+A Sbjct: 360 WLGKWAEQAGATAEARSQFREVLKRYPRSYYA 391 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 32/107 (29%), Gaps = 8/107 (7%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + + +P + A + A G A S + +P + Sbjct: 300 AIPLYRRLVERYPQSAKAPNAAWELAAQSAERGNTGAARSYARWLVRNHPADPFAPKAAF 359 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 +G +A+ AT +++RY S Y + + Sbjct: 360 WLGK-WAEQA-------GATAEARSQFREVLKRYPRSYYAWRSAARL 398 >gi|88861312|ref|ZP_01135943.1| putative periplasmic protein contains a protein prenylyltransferase domain [Pseudoalteromonas tunicata D2] gi|88816691|gb|EAR26515.1| putative periplasmic protein contains a protein prenylyltransferase domain [Pseudoalteromonas tunicata D2] Length = 248 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 53/129 (41%), Gaps = 15/129 (11%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 +Y + ++ + D+R + +++Y S YV A +++ ++ Sbjct: 130 AYDRAVQMIMKDKRY-DQAIPQFQTFLQQYPQSVYVPNAHYWLGQLQSM----------- 177 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + + AA F+ V+ Y D+ +AM +L +A+ ++ + ++YP+ Sbjct: 178 ---KNDVDAAKTHFEAVVNGYPDSNKRPDAMLKLAAVLQKQGNDAKAKTIMQQLIDQYPE 234 Query: 260 GYWARYVET 268 A+ + Sbjct: 235 STAAKLAKD 243 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 49/138 (35%), Gaps = 9/138 (6%) Query: 46 VYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + +++ + + Y++AV +K++ + +A F + +P + + +Q Sbjct: 116 EEVSTISSNLSENDAYDRAVQMIMKDKRYDQAIPQFQTFLQQYPQSVYVPNAHYWLGQLQ 175 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 A + E + YP+S + + D M + Sbjct: 176 SMKNDVDAAKTHFEAVVNGYPDSNKRPDAMLKLAAVLQKQGNDA--------KAKTIMQQ 227 Query: 165 IVERYTNSPYVKGARFYV 182 ++++Y S K A+ + Sbjct: 228 LIDQYPESTAAKLAKDRI 245 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 22/124 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +Y QA + ++ QYP+S V +Y +G ++ + D A K + + Sbjct: 140 KDKRYDQAIPQFQTFLQQYPQSVYVPNAHYWLG-----QLQSMKNDVDAAK---THFEAV 191 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V Y +S A + K+G A Q ++ Y ++ Sbjct: 192 VNGYPDSNKRPDAMLKLAAVLQ--------------KQGNDAKAKTIMQQLIDQYPESTA 237 Query: 226 AEEA 229 A+ A Sbjct: 238 AKLA 241 >gi|237719009|ref|ZP_04549490.1| TPR-domain-containing protein [Bacteroides sp. 2_2_4] gi|229451787|gb|EEO57578.1| TPR-domain-containing protein [Bacteroides sp. 2_2_4] Length = 1005 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 72/218 (33%), Gaps = 36/218 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-------YQQA 113 Y + +++++A YF + + + A G +++A Sbjct: 513 YNLGYIAFHRKDYTQASNYFQK----YVQLEKGENAT-ALADAYNRIGDCHLHVRNFEEA 567 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + S DY +Y + + + ++R+V +Y SP Sbjct: 568 KQYYSQAEQMNTSS--GDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPASP 617 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y A E GR Y+ AI F+ +L Y ++ + +A A + Sbjct: 618 YAVNAI--------------YEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEI 663 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Y ++A E + E+YP AR +K Sbjct: 664 GLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 34/80 (42%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +YEK ++ N ++A F + +P + V+RK+ + Y G Y Sbjct: 614 PASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDY 673 Query: 111 QQAASLGEEYITQYPESKNV 130 QA ++ I +YP S+ Sbjct: 674 NQAIEAYKQVIEKYPGSEEA 693 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 75/267 (28%), Gaps = 55/267 (20%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 +C + D T +Y++ +E+N++ A + P A Sbjct: 9 ICAAICCTPIIGFAQTGDKFTST---DNLYKEGKELFQEKNYAAALPALKAFVKQKPVAS 65 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--------- 142 + + + M Y + L +Y+ +YP++ + +Y L+ Y Sbjct: 66 LLQDAEYMLVSSAYELKDKNR-IELLRKYLDRYPDTPYANRIYALLASCYFYEGKYDEAL 124 Query: 143 --------QMIRDVPYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYV 182 ++ + D + + + Y K +Y+ Sbjct: 125 ALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYL 182 Query: 183 TVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + R I Y + Y A Q L+ Y + Sbjct: 183 SYIRYTQKRYSEALKGFLPLQDDSKYKALVPYYIAEIYTQLKNYDKAQIVAQNYLSAYPN 242 Query: 223 AEHAEEAMARLVEAYVALALMDEAREV 249 EHA E L +AY +A E Sbjct: 243 NEHAAEMYRILGDAYYHFGQYHQAVEA 269 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 47/125 (37%), Gaps = 8/125 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A++ +++++ N+ +P + A ++ QA + +E Sbjct: 587 YQLALVSGLQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKEL 646 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +T+YPES +G+ Y Q ++ +++E+Y S + A Sbjct: 647 LTKYPESPVSRKAAAEIGLLYYQK--------GDYNQAIEAYKQVIEKYPGSEEARLAMR 698 Query: 181 YVTVG 185 + Sbjct: 699 DLKSI 703 Score = 43.2 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 77/220 (35%), Gaps = 36/220 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A ++ + +N+ KA +P A + + Y G+Y QA Y Sbjct: 214 YYIAEIYTQLKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEAFNNY 273 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + + + D Y++G+SY Q + + + ++ N + A Sbjct: 274 LNKDRSAPRRD-ALYMLGLSYYQT--------KVYSKAAETLGKVTTD--NDALTQNAYL 322 Query: 181 YVTVGRNQLAAK---------------EVEI---GRYYL-------KRGEYVAAIPRFQL 215 ++ + QLA K ++I Y + ++ F+ Sbjct: 323 HMGLSYLQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFSAFGESVTAFEK 382 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 L + + +AE+ + LVE Y+ D A + + I + Sbjct: 383 FLNEFPTSPYAEKVSSYLVEVYMNTRSYDAALKSIDRIAK 422 Score = 42.8 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 28/190 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A +LK N +A +F + P A+ ++++Y+ +Y +A + + Sbjct: 145 YQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYLSYIRYTQKRYSEAL---KGF 199 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +SK V Y + Y Q+ + + Y N+ + Sbjct: 200 LPLQDDSKYKALVPYYIAEIYTQL--------KNYDKAQIVAQNYLSAYPNNEHAAEMYR 251 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + G Y G+Y A+ F L + +A+ L +Y Sbjct: 252 IL--------------GDAYYHFGQYHQAVEAFNNYLNK-DRSAPRRDALYMLGLSYYQT 296 Query: 241 ALMDEAREVV 250 + +A E + Sbjct: 297 KVYSKAAETL 306 Score = 35.9 bits (82), Expect = 6.2, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 50/167 (29%), Gaps = 22/167 (13%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + YL+ + +Y + + + + +SKA E + + D + + + L Sbjct: 271 NNYLNKDRSAPRRDALYMLGLSYYQTKVYSKAAETLGKVTTDN--DALTQNAYLHMGLSY 328 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + +A E+ + + Y + + A + + Sbjct: 329 LQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFS------AFGESVTAFEK 382 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + SPY + Y+ Y+ Y AA+ Sbjct: 383 FLNEFPTSPYAEKVSSYLVEV--------------YMNTRSYDAALK 415 >gi|83592432|ref|YP_426184.1| hypothetical protein Rru_A1096 [Rhodospirillum rubrum ATCC 11170] gi|83575346|gb|ABC21897.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170] Length = 279 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 39/124 (31%), Gaps = 17/124 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A L+ ++ A + F P +A + Y G Y+QAA + Sbjct: 159 YNYAFSLLRNADYPAAEQAFKAFLDQHPKGSLAGNAQYWLGETYYVRGDYEQAAVA---F 215 Query: 121 I---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + +P+S +G++ A + +K R+ +Y Sbjct: 216 MGGYQSHPDSSKGPDNLLKLGLAMANL--------GKSKEACAAFGRLESQYPK---AAD 264 Query: 178 ARFY 181 A Sbjct: 265 AIKR 268 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 36/103 (34%), Gaps = 14/103 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q ++++ A++++ G Y RG+Y A F Sbjct: 173 AAEQAFKAFLDQHPKGSLAGNAQYWL--------------GETYYVRGDYEQAAVAFMGG 218 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 ++ D+ + + +L A L EA ++ +YP+ Sbjct: 219 YQSHPDSSKGPDNLLKLGLAMANLGKSKEACAAFGRLESQYPK 261 >gi|294056496|ref|YP_003550154.1| hypothetical protein Caka_2971 [Coraliomargarita akajimensis DSM 45221] gi|293615829|gb|ADE55984.1| hypothetical protein Caka_2971 [Coraliomargarita akajimensis DSM 45221] Length = 1008 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 47/148 (31%), Gaps = 28/148 (18%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y + ++ +F +A + + ++FP + A +LL Q+ ++ A + Sbjct: 477 YYWSGLATVQLSDFVEAIKRMDVVLKEFPTSLYAEDALLRKGIAQFYLQEFGAARVTLTK 536 Query: 120 YITQYPESKNVDYVYY------------LVGMSYAQMIRDVPYDQRATKLM---LQYMSR 164 Y YP +D YY + + + Q + M Sbjct: 537 YTQDYPRGVAIDQAYYFLGEVESYEGYVERALKNFRKCDKLTKSQEMHDAASFRIGNMLE 596 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAK 192 ++ERY T R+ A Sbjct: 597 LLERY-------------TEMRDHFAKY 611 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 6/80 (7%) Query: 197 GRYYL------KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 G YY + ++V AI R +VL + + +AE+A+ R A L AR + Sbjct: 475 GLYYWSGLATVQLSDFVEAIKRMDVVLKEFPTSLYAEDALLRKGIAQFYLQEFGAARVTL 534 Query: 251 SLIQERYPQGYWARYVETLV 270 + + YP+G + Sbjct: 535 TKYTQDYPRGVAIDQAYYFL 554 >gi|254415937|ref|ZP_05029694.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196177364|gb|EDX72371.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 268 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 77/235 (32%), Gaps = 31/235 (13%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 + ++ F Q V ++ ++ E+Y + V L++ +++ A F Sbjct: 8 LTILGLMTVLTGFSEAVHAQQPIRVVQEAPSEELTAVELYNQGVDKLEKGDYAGAISDFG 67 Query: 82 QCSRDFPFAGVARKS--LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 + P + + +S G Y A + I P + Y G Sbjct: 68 DALKLEP-----EDADTYYNRGYAYHSLGNYDAAIYDYTQAIKLNP---DFSQAYSNRGY 119 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYT--NSPYVKGARFYVTVGRNQLA----AKE 193 +Y V D + + ++ +E ++ Y+ Y +G ++ A AK Sbjct: 120 TYF-----VRRD---YQKAIADFTKAIEIDPENDTAYISRGNAYDELGNSEEALNDYAKA 171 Query: 194 VEI----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 +EI R Y RG R + +D + E EAY L Sbjct: 172 LEINPENARLYYNRGL---TRNRLEQYEDAIADYTKSIELQPTFAEAYYNRGLTQ 223 >gi|160884096|ref|ZP_02065099.1| hypothetical protein BACOVA_02072 [Bacteroides ovatus ATCC 8483] gi|156110438|gb|EDO12183.1| hypothetical protein BACOVA_02072 [Bacteroides ovatus ATCC 8483] Length = 1005 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 72/218 (33%), Gaps = 36/218 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-------YQQA 113 Y + +++++A YF + + + A G +++A Sbjct: 513 YNLGYIAFHRKDYTQASNYFQK----YVQLEKGENAT-ALADAYNRIGDCHLHVRNFEEA 567 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + S DY +Y + + + ++R+V +Y SP Sbjct: 568 KQYYSQAEQMNTSS--GDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPASP 617 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y A E GR Y+ AI F+ +L Y ++ + +A A + Sbjct: 618 YAVNAI--------------YEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEI 663 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Y ++A E + E+YP AR +K Sbjct: 664 GLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 34/80 (42%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +YEK ++ N ++A F + +P + V+RK+ + Y G Y Sbjct: 614 PASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDY 673 Query: 111 QQAASLGEEYITQYPESKNV 130 QA ++ I +YP S+ Sbjct: 674 NQAIEAYKQVIEKYPGSEEA 693 Score = 52.0 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 82/252 (32%), Gaps = 20/252 (7%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 +C + D T +Y++ +E+N++ A + P A Sbjct: 9 ICAAICCTPIIGFAQTGDKFTST---DNLYKEGKELFQEKNYAAALPALKAFVKQKPAAS 65 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--------- 142 + + + M Y + L +Y+ +YP++ + +Y L+ Y Sbjct: 66 LLQDAEYMLVSSAYELKDKNR-IELLRKYLDRYPDTPYANRIYALLASCYFYEGKYDEAL 124 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + D + ++ Y + ++ A + R + YYL Sbjct: 125 ALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANSPKYAKD-CDYYLS 183 Query: 203 RGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 Y R+ L + D+++ + E YV L D+A+ V YP Sbjct: 184 YIRYTQ--KRYTEALKGFLPLQDDSKYKTLVPYYIAEIYVQLKNYDKAQIVAQNYLSAYP 241 Query: 259 QGYWARYVETLV 270 +A + ++ Sbjct: 242 NNEYAAEMYRIL 253 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 47/125 (37%), Gaps = 8/125 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A++ +++++ N+ +P + A ++ QA + +E Sbjct: 587 YQLALVSGLQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKEL 646 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +T+YPES +G+ Y Q ++ +++E+Y S + A Sbjct: 647 LTKYPESPVSRKAAAEIGLLYYQK--------GDYNQAIEAYKQVIEKYPGSEEARLAMR 698 Query: 181 YVTVG 185 + Sbjct: 699 DLKSI 703 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 65/190 (34%), Gaps = 28/190 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A +LK N +A +F + P A+ ++++Y+ +Y +A + + Sbjct: 145 YQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYLSYIRYTQKRYTEAL---KGF 199 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +SK V Y + Y Q+ + + Y N+ Y Sbjct: 200 LPLQDDSKYKTLVPYYIAEIYVQL--------KNYDKAQIVAQNYLSAYPNNEYAAEMYR 251 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + G Y G+Y A+ F L + +A+ L +Y Sbjct: 252 IL--------------GDVYYHFGQYHQAVEAFNNYLNK-DRSAPRRDALYMLGLSYYQT 296 Query: 241 ALMDEAREVV 250 + +A E + Sbjct: 297 KVYSKAAETL 306 Score = 35.9 bits (82), Expect = 6.3, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 50/167 (29%), Gaps = 22/167 (13%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + YL+ + +Y + + + + +SKA E + + D + + + L Sbjct: 271 NNYLNKDRSAPRRDALYMLGLSYYQTKVYSKAAETLGKVTTDN--DALTQNAYLHMGLSY 328 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + +A E+ + + Y + + A + + Sbjct: 329 LQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFS------AFGESVTAFEK 382 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + SPY + Y+ Y+ Y AA+ Sbjct: 383 FLNEFPTSPYAEKVSSYLVEV--------------YMNTRSYDAALK 415 >gi|299144753|ref|ZP_07037821.1| TPR-domain containing protein [Bacteroides sp. 3_1_23] gi|298515244|gb|EFI39125.1| TPR-domain containing protein [Bacteroides sp. 3_1_23] Length = 1005 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 72/218 (33%), Gaps = 36/218 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-------YQQA 113 Y + +++++A YF + + + A G +++A Sbjct: 513 YNLGYIAFHRKDYTQASNYFQK----YVQLEKGENAT-ALADAYNRIGDCHLHVRNFEEA 567 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + S DY +Y + + + ++R+V +Y SP Sbjct: 568 KQYYSQAEQMNTSS--GDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPASP 617 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y A E GR Y+ AI F+ +L Y ++ + +A A + Sbjct: 618 YAVNAI--------------YEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEI 663 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Y ++A E + E+YP AR +K Sbjct: 664 GLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 34/80 (42%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +YEK ++ N ++A F + +P + V+RK+ + Y G Y Sbjct: 614 PASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDY 673 Query: 111 QQAASLGEEYITQYPESKNV 130 QA ++ I +YP S+ Sbjct: 674 NQAIEAYKQVIEKYPGSEEA 693 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 75/267 (28%), Gaps = 55/267 (20%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 +C + D T +Y++ +E+N++ A + P A Sbjct: 9 ICAAICCTPIIGFAQTGDKFTST---DNLYKEGKELFQEKNYAAALPALKAFVKQKPAAS 65 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--------- 142 + + + M Y + L +Y+ +YP++ + +Y L+ Y Sbjct: 66 LLQDAEYMLVSSAYELKDKNR-IELLRKYLDRYPDTPYANRIYALLASCYFYEGKYDEAL 124 Query: 143 --------QMIRDVPYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYV 182 ++ + D + + + Y K +Y+ Sbjct: 125 ALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYL 182 Query: 183 TVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + R I Y + Y A Q L+ Y + Sbjct: 183 SYIRYTQKRYSEALKGFLPLQDDSKYKALVPYYIAEIYTQLKNYDKAQIVAQNYLSAYPN 242 Query: 223 AEHAEEAMARLVEAYVALALMDEAREV 249 EHA E L +AY +A E Sbjct: 243 NEHAAEMYRILGDAYYHFGQYHQAVEA 269 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 47/125 (37%), Gaps = 8/125 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A++ +++++ N+ +P + A ++ QA + +E Sbjct: 587 YQLALVSGLQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKEL 646 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +T+YPES +G+ Y Q ++ +++E+Y S + A Sbjct: 647 LTKYPESPVSRKAAAEIGLLYYQK--------GDYNQAIEAYKQVIEKYPGSEEARLAMR 698 Query: 181 YVTVG 185 + Sbjct: 699 DLKSI 703 Score = 43.2 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 77/220 (35%), Gaps = 36/220 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A ++ + +N+ KA +P A + + Y G+Y QA Y Sbjct: 214 YYIAEIYTQLKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEAFNNY 273 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + + + D Y++G+SY Q + + + ++ N + A Sbjct: 274 LNKDRSAPRRD-ALYMLGLSYYQT--------KVYSKAAETLGKVTTD--NDALTQNAYL 322 Query: 181 YVTVGRNQLAAK---------------EVEI---GRYYL-------KRGEYVAAIPRFQL 215 ++ + QLA K ++I Y + ++ F+ Sbjct: 323 HMGLSYLQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFSAFGESVTAFEK 382 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 L + + +AE+ + LVE Y+ D A + + I + Sbjct: 383 FLNEFPTSPYAEKVSSYLVEVYMNTRSYDAALKSIDRIAK 422 Score = 42.8 bits (100), Expect = 0.050, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 28/190 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A +LK N +A +F + P A+ ++++Y+ +Y +A + + Sbjct: 145 YQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYLSYIRYTQKRYSEAL---KGF 199 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +SK V Y + Y Q+ + + Y N+ + Sbjct: 200 LPLQDDSKYKALVPYYIAEIYTQL--------KNYDKAQIVAQNYLSAYPNNEHAAEMYR 251 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + G Y G+Y A+ F L + +A+ L +Y Sbjct: 252 IL--------------GDAYYHFGQYHQAVEAFNNYLNK-DRSAPRRDALYMLGLSYYQT 296 Query: 241 ALMDEAREVV 250 + +A E + Sbjct: 297 KVYSKAAETL 306 Score = 35.9 bits (82), Expect = 6.4, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 50/167 (29%), Gaps = 22/167 (13%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + YL+ + +Y + + + + +SKA E + + D + + + L Sbjct: 271 NNYLNKDRSAPRRDALYMLGLSYYQTKVYSKAAETLGKVTTDN--DALTQNAYLHMGLSY 328 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + +A E+ + + Y + + A + + Sbjct: 329 LQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFS------AFGESVTAFEK 382 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + SPY + Y+ Y+ Y AA+ Sbjct: 383 FLNEFPTSPYAEKVSSYLVEV--------------YMNTRSYDAALK 415 >gi|187735051|ref|YP_001877163.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila ATCC BAA-835] gi|187425103|gb|ACD04382.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila ATCC BAA-835] Length = 1077 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 70/228 (30%), Gaps = 25/228 (10%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + +Y A+ + K E Q ++FP + A +S K+ Sbjct: 371 PDAPGREDNLYYLAMTTWQLGEADKGGELVAQHLKEFPNSKYAPMLNTLSLEGLLKEKKF 430 Query: 111 QQAASLGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 ++ + + P K + Y G S + D K + + R V+ Sbjct: 431 DLCVQQADKVMELHKDDPTHKFYELALYCKGASLFNLG---AADASRYKEAVPVLERFVK 487 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y +S Y+K A + + G Y G AI F +A + D A Sbjct: 488 EYRDSTYLKTA---MYLL-----------GETYTNLGNTDEAIRSFTNYIARFPDKGEAN 533 Query: 228 EAMARLVEAYVAL-----ALMDEAREVVSLIQERYPQGYWARYVETLV 270 A A+ L + A + I + + Y L+ Sbjct: 534 MAAVLYDRAFNYLNRKNPGDEELAAKDAKEIVDNFKDHRLFPYANNLL 581 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 27/199 (13%), Positives = 64/199 (32%), Gaps = 20/199 (10%) Query: 38 WERQSSR--DVYLDSVTDVRYQREVYEKAVLFLKEQ-----NFSKAYEYFNQCSRDFPFA 90 +Q+ + +++ D T Y+ +Y K + +A + +++ + Sbjct: 433 CVQQADKVMELHKDDPTHKFYELALYCKGASLFNLGAADASRYKEAVPVLERFVKEYRDS 492 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP--ESKNVDYVYYLVGMSYAQMIRDV 148 + ++ + + G +A YI ++P N+ V Y +Y Sbjct: 493 TYLKTAMYLLGETYTNLGNTDEAIRSFTNYIARFPDKGEANMAAVLYDRAFNYLNR---- 548 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 + +L + IV+ + + A + E E Y ++A Sbjct: 549 -KNPGDEELAAKDAKEIVDNFKDHRLFPYANNLLANLCAGSKEHEQEAEGY------FLA 601 Query: 209 AIPRFQLVLANYSDAEHAE 227 A+ + + AE Sbjct: 602 ALESAKKLGDKRPAAEAVY 620 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 58/179 (32%), Gaps = 41/179 (22%) Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A + + YP++ + Y + M+ Q+ + +++ ++ + NS Sbjct: 359 ARAAYQLINESYPDAPGREDNLYYLAMTTWQL--------GEADKGGELVAQHLKEFPNS 410 Query: 173 PYVKGAR----------FYVTVGRNQLAAK--EVE----IGRYY-----------LKRGE 205 Y + Q A K E+ ++Y G Sbjct: 411 KYAPMLNTLSLEGLLKEKKFDLCVQQ-ADKVMELHKDDPTHKFYELALYCKGASLFNLGA 469 Query: 206 -----YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y A+P + + Y D+ + + AM L E Y L DEA + R+P Sbjct: 470 ADASRYKEAVPVLERFVKEYRDSTYLKTAMYLLGETYTNLGNTDEAIRSFTNYIARFPD 528 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 28/61 (45%) Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 A +QL+ +Y DA E+ + L L D+ E+V+ + +P +A + T Sbjct: 359 ARAAYQLINESYPDAPGREDNLYYLAMTTWQLGEADKGGELVAQHLKEFPNSKYAPMLNT 418 Query: 269 L 269 L Sbjct: 419 L 419 Score = 35.5 bits (81), Expect = 8.0, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS---AFVQYSAGKYQQAASL 116 Y+K V + +N+ +A E F C FP + + + G + + A L Sbjct: 79 YYQKGVCLAQLKNYKEAVEAFKACYTKFP-SAKNQLVKMALFREGENYCRLGDFAKGAEL 137 Query: 117 GEEYITQYPESK-----NVDYVYYLVGMSYAQMIR 146 E+++ +Y N V L+ Y +M Sbjct: 138 LEKFLKEYRSDPVARNVNAGEVQGLLAQCYFKMSP 172 >gi|332704037|ref|ZP_08424125.1| tol-pal system protein YbgF [Desulfovibrio africanus str. Walvis Bay] gi|332554186|gb|EGJ51230.1| tol-pal system protein YbgF [Desulfovibrio africanus str. Walvis Bay] Length = 289 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 54/126 (42%), Gaps = 8/126 (6%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + +Y +A+ K++N+ A + + + +P + ++ Y G + +A Sbjct: 169 SDPAQALYLRALDNFKKRNYMNAQSMWAEFVKAYPKHELVSNAIFWQGESFYQTGDFARA 228 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 ++ IT+YP+S + G+++ ++ +D D + +V++Y S Sbjct: 229 VLSYQDVITKYPKSNKIPAAMLKQGIAFKKIGKDKAGDL--------VLQELVKKYPKSA 280 Query: 174 YVKGAR 179 K A+ Sbjct: 281 EAKRAK 286 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 22/144 (15%) Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 +S + YL + + R + V+ Y V A F+ Sbjct: 167 QSSDPAQALYLRALDNFKK--------RNYMNAQSMWAEFVKAYPKHELVSNAIFWQ--- 215 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 G + + G++ A+ +Q V+ Y + AM + A+ + Sbjct: 216 -----------GESFYQTGDFARAVLSYQDVITKYPKSNKIPAAMLKQGIAFKKIGKDKA 264 Query: 246 AREVVSLIQERYPQGYWARYVETL 269 V+ + ++YP+ A+ ++ Sbjct: 265 GDLVLQELVKKYPKSAEAKRAKSF 288 >gi|302342735|ref|YP_003807264.1| cell wall hydrolase/autolysin [Desulfarculus baarsii DSM 2075] gi|301639348|gb|ADK84670.1| cell wall hydrolase/autolysin [Desulfarculus baarsii DSM 2075] Length = 584 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 41/126 (32%), Gaps = 15/126 (11%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLL------MSAFVQYSAG-KYQQAASLGEEYITQY 124 N+ E F++ P +A LL A+ Q+ +A+ I + Sbjct: 59 NWVSLAERFSRIYTADPSGPLAPGCLLWTGRIFAGAYEQFKQKKDLDKASDALRRLINHF 118 Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 P+S D ++ + + K + R+V Y NS A+ + Sbjct: 119 PDSNLADDAQLMIAELHIK--------HGDVKTAYLELLRVVVNYPNSDMAPEAKKRLDE 170 Query: 185 GRNQLA 190 LA Sbjct: 171 LERTLA 176 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 42/128 (32%), Gaps = 24/128 (18%) Query: 114 ASLGEEYITQY---PESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIVE 167 SL E + Y P G + + + ++ + R++ Sbjct: 61 VSLAERFSRIYTADPSGPLAPGCLLWTGRIFAGAYEQFKQ----KKDLDKASDALRRLIN 116 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 + +S A+ + E+ I K G+ A V+ NY +++ A Sbjct: 117 HFPDSNLADDAQLMIA---------ELHI-----KHGDVKTAYLELLRVVVNYPNSDMAP 162 Query: 228 EAMARLVE 235 EA RL E Sbjct: 163 EAKKRLDE 170 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 1/75 (1%) Query: 60 VYEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++ A ++++ KA + + FP + +A + LM A + G + A Sbjct: 90 IFAGAYEQFKQKKDLDKASDALRRLINHFPDSNLADDAQLMIAELHIKHGDVKTAYLELL 149 Query: 119 EYITQYPESKNVDYV 133 + YP S Sbjct: 150 RVVVNYPNSDMAPEA 164 >gi|291527181|emb|CBK92767.1| Tetratricopeptide repeat [Eubacterium rectale M104/1] Length = 320 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 78/244 (31%), Gaps = 36/244 (14%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 ALT+ + L G D D R+ + ++ ++ A + F Sbjct: 7 MALTLTVVLTAGMLTGCGSG-------DKAKDKDAYRQY---GINCIENGSYDDAVDAFQ 56 Query: 82 QCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + + A L + QY +G A I +K+ D YYL Sbjct: 57 KALDQSVGSVGAE--ELDICYYKAKAQYLSGDVDGAIDTYTAIID---YNKDSD-AYYLR 110 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERY-----TNSPYV--KGARFYVT---VGRN 187 G Y D + K L + E Y T S Y + Y+ + Sbjct: 111 GCIYFAK-NDSDKGLKDFKTALSENNDNYELYLGVYETLSKYGMNDQGKEYLDNALKLKA 169 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 + A ++ GR Y G+Y +AI Q + E +A + E Y D ++ Sbjct: 170 KTADDYMQRGRIYTLLGDYDSAIKSLQKAID-----EKLVKANYYMGEVYQKKGDNDSSQ 224 Query: 248 EVVS 251 + Sbjct: 225 KYFK 228 Score = 42.8 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 7/76 (9%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 E+ + N+ A YF + ++ +G + A S Sbjct: 240 ELMNMGQAQMDNGNYDTAITYFQNALELESV----PNKQQITKAMIIAYEYSGDFATAKS 295 Query: 116 LGEEYITQYPESKNVD 131 EEY+ YP+ ++ Sbjct: 296 KMEEYMKDYPDDEDAA 311 >gi|57167958|ref|ZP_00367097.1| probable lipoprotein Cj1074c [Campylobacter coli RM2228] gi|305431892|ref|ZP_07401059.1| probable lipoprotein [Campylobacter coli JV20] gi|57020332|gb|EAL57001.1| probable lipoprotein Cj1074c [Campylobacter coli RM2228] gi|304444976|gb|EFM37622.1| probable lipoprotein [Campylobacter coli JV20] Length = 215 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 68/198 (34%), Gaps = 21/198 (10%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 +C L+G + D E Y++ + L++++ KA +++N + + Sbjct: 7 LCILLGILFSACS-TKNDEGLYNLSASEWYKQIIKDLQDKDLEKADDHYNGMASEHIADP 65 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 + + ++ A +YQ A +EY ++ S+N DY+ YL + + Sbjct: 66 LLETTQIILAQAHMDEEEYQLAEFYLDEYNKKFGNSRNADYIRYLKIKAKFDAFAVPNRN 125 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q + + + Y + Y + +T + +YL Sbjct: 126 QALMLESQKEIDSFLNDYPYTEYEPLVQTMLTK---------FNLAVFYLN--------- 167 Query: 212 RFQLVLANYSDAEHAEEA 229 + Y H + A Sbjct: 168 --DTIQDLYERTGHTQSA 183 >gi|39995292|ref|NP_951243.1| putative lipoprotein [Geobacter sulfurreducens PCA] gi|39982054|gb|AAR33516.1| lipoprotein, putative [Geobacter sulfurreducens PCA] gi|307634660|gb|ADI83018.2| peptidoglycan L,D-transpeptidase lipoprotein, YkuD family, TPR domain-containing [Geobacter sulfurreducens KN400] Length = 309 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 22/180 (12%), Positives = 50/180 (27%), Gaps = 73/180 (40%) Query: 27 FFSIAVC---FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 FF + +C L G ++++A + N+S + + + + Sbjct: 12 FFPVCICCMLLLCGCSHH--------------RAASIFQEANDLFSQGNYSASLDAYTRI 57 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE------YITQYPESKNVDYVYYLV 137 P + + +I YP +++ DY Sbjct: 58 GETHP--------------------------AAKDRVLFEKGFIHAYPRNEHKDY----- 86 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + L+ ++V + S Y + + + G N + K+ I Sbjct: 87 ------------------QKALECFEQLVREFPESRYRQDS-ERMIFGINTVVLKDGTIA 127 >gi|146283136|ref|YP_001173289.1| hypothetical protein PST_2801 [Pseudomonas stutzeri A1501] gi|145571341|gb|ABP80447.1| conserved hypothetical protein [Pseudomonas stutzeri A1501] Length = 270 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 46/130 (35%), Gaps = 8/130 (6%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D ++ Y+ A +K ++F KA + F R +P + A + V + G Q Sbjct: 147 DPAQEKLYYDAAFDLIKAKDFDKASQAFAAFLRKYPDSQYAGNAQYWLGEVNLAKGDLQG 206 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A YP+ V Y + DV + +++ +Y N+ Sbjct: 207 AGQAFARVSQAYPQHSKVPDSLYKLA--------DVEIRMGNRDKAQGILRQVIAQYPNT 258 Query: 173 PYVKGARFYV 182 + A+ + Sbjct: 259 SAAQLAQRQL 268 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 41/109 (37%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + Q + + +Y +S Y A++++ LA +++ A Sbjct: 165 KDFDKASQAFAAFLRKYPDSQYAGNAQYWLGEVN--LAKGDLQ------------GAGQA 210 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 F V Y +++ +L + + + D+A+ ++ + +YP Sbjct: 211 FARVSQAYPQHSKVPDSLYKLADVEIRMGNRDKAQGILRQVIAQYPNTS 259 >gi|219847542|ref|YP_002461975.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485] gi|219541801|gb|ACL23539.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485] Length = 1112 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 47/136 (34%), Gaps = 18/136 (13%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T+ R Y +A+L +++ ++ +A N+ P ++ Y+ G+ + Sbjct: 992 TNDRIAESFYRRALLAIRDNDYDQAIRDLNRTVTLQPNFP---EAYYWLGRAYYTQGRIE 1048 Query: 112 QAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 A E IT P DY + G+ + D+ ++ R Sbjct: 1049 NAQQAIERAITLNP-----DYSEAIFYSGL--------IAEDRANVAAARDAYQTLISRE 1095 Query: 170 TNSPYVKGARFYVTVG 185 S + + AR + Sbjct: 1096 PTSEWGQRARAQLERL 1111 >gi|294645887|ref|ZP_06723563.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a] gi|292638767|gb|EFF57109.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a] Length = 601 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 34/80 (42%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +YEK ++ N ++A F + +P + V+RK+ + Y G Y Sbjct: 210 PASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDY 269 Query: 111 QQAASLGEEYITQYPESKNV 130 QA ++ I +YP S+ Sbjct: 270 NQAIEAYKQVIEKYPGSEEA 289 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 72/214 (33%), Gaps = 28/214 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y + +++++A YF + + +A + +++A Sbjct: 109 YNLGYIAFHRKDYTQASNYFQKYIQLEKGENATALA-DAYNRIGDCHLHVRNFEEAKQYY 167 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + S DY +Y + + + ++R+V +Y SPY Sbjct: 168 SQAEQMNTSS--GDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPASPYAVN 217 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A E GR Y+ AI F+ +L Y ++ + +A A + Y Sbjct: 218 AI--------------YEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLY 263 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++A E + E+YP AR +K Sbjct: 264 YQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 297 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 47/125 (37%), Gaps = 8/125 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A++ +++++ N+ +P + A ++ QA + +E Sbjct: 183 YQLALVSGLQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKEL 242 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +T+YPES +G+ Y Q ++ +++E+Y S + A Sbjct: 243 LTKYPESPVSRKAAAEIGLLYYQK--------GDYNQAIEAYKQVIEKYPGSEEARLAMR 294 Query: 181 YVTVG 185 + Sbjct: 295 DLKSI 299 >gi|253990431|ref|YP_003041787.1| tol-pal system protein YbgF [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781881|emb|CAQ85045.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 255 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 53/140 (37%), Gaps = 9/140 (6%) Query: 47 YLDSVTDVRYQREVYEKA-VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 + S ++ Y+ A L + + + KA F +++P + + + Y Sbjct: 124 QVSSPVGTGSEKGDYDAAVHLAVNSKEYDKAIVSFQSFVKNYPKSSYIPNANYWLGQLHY 183 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + GK +AA + +YP+S+ Y VG+ + D+ ++ Sbjct: 184 NKGKKDEAAYYFATVVKEYPKSQKSGESLYKVGL--------IMQDKGQKDKARSVYQQV 235 Query: 166 VERYTNSPYVKGARFYVTVG 185 +++Y S K A ++ Sbjct: 236 MKQYPGSNVAKLAEKKLSTL 255 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 40/112 (35%), Gaps = 14/112 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + V+ Y S Y+ A +++ +G+ A F V Sbjct: 153 KAIVSFQSFVKNYPKSSYIPNANYWLGQLH--------------YNKGKKDEAAYYFATV 198 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + Y ++ + E++ ++ D+AR V + ++YP A+ E Sbjct: 199 VKEYPKSQKSGESLYKVGLIMQDKGQKDKARSVYQQVMKQYPGSNVAKLAEK 250 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 24/58 (41%) Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 EY AI FQ + NY + + A L + + DEA + + + YP+ Sbjct: 149 KEYDKAIVSFQSFVKNYPKSSYIPNANYWLGQLHYNKGKKDEAAYYFATVVKEYPKSQ 206 >gi|332828114|gb|EGK00832.1| hypothetical protein HMPREF9455_02847 [Dysgonomonas gadei ATCC BAA-286] Length = 386 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 73/224 (32%), Gaps = 36/224 (16%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM- 99 +SR + D + R +Y K + N ++ + P +++ Sbjct: 81 NASRYADMAIQKDAKSARALYVKGSISSANGNHTQGITDIQKAISLAP-----KQAEYYT 135 Query: 100 -SAFVQYSAGKYQQAASLGEEYITQ-YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + ++ Y +A + + + P K +Y++G YA Q K Sbjct: 136 GLGDIYFAQDDYTKALTNYRKAVNLPNPSEK----AFYMIGAVYAN--------QDNVKQ 183 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 L S K YVTV N IG+ Y A ++ + Sbjct: 184 ALDTFYVA-----KSKIEKDKELYVTVLNN--------IGKIEFDNKNYKDASEAYRELT 230 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + D + ++ +LVE Y AL A + + Y QG Sbjct: 231 EYFPDDYY---SLEKLVECYNALGYYSRADVSKARLYTAYEQGE 271 >gi|225620098|ref|YP_002721355.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] gi|225214917|gb|ACN83651.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] Length = 346 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 9/126 (7%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A E N+ K+ Y+ + + FP +L A Y+ Y +A + Sbjct: 226 AHKTFIEGNYIKSRMYYTKIAELFPRTEYGEDALFRIAQSYYNEKNYNKALDYYNR-VRL 284 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 +G+SY ++ R + + + Y +P V AR Y+ Sbjct: 285 NNVYTLDAEALLYIGLSYFKVGRYSD--------SYKVLDTFISEYPANPNVSRAREYMQ 336 Query: 184 VGRNQL 189 + L Sbjct: 337 ALQETL 342 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 42/84 (50%), Gaps = 2/84 (2%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 + ++ A + E+N++KA +Y+N+ + + A +LL + G+Y + + Sbjct: 256 EDALFRIAQSYYNEKNYNKALDYYNRVRLNNVYTLDAE-ALLYIGLSYFKVGRYSDSYKV 314 Query: 117 GEEYITQYPESKNVDYV-YYLVGM 139 + +I++YP + NV Y+ + Sbjct: 315 LDTFISEYPANPNVSRAREYMQAL 338 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 68/203 (33%), Gaps = 34/203 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ + +A YF + ++L A V ++ +Y +A E+++ Sbjct: 153 GYQLFLQKKYGEALSYFLRYD--------GELAVLGRARVYFNMNEYDRAFETYEDFLKY 204 Query: 124 YPESKNVDYVY--YLV---GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 S D V YL+ M++ I Y ++I E + + Y + A Sbjct: 205 NKTSIYYDEVVRTYLIQVPAMAHKTFIEG------NYIKSRMYYTKIAELFPRTEYGEDA 258 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 F I + Y Y A+ + V N A EA+ + +Y Sbjct: 259 LFR--------------IAQSYYNEKNYNKALDYYNRVRLNNVYTLDA-EALLYIGLSYF 303 Query: 239 ALALMDEAREVVSLIQERYPQGY 261 + ++ +V+ YP Sbjct: 304 KVGRYSDSYKVLDTFISEYPANP 326 >gi|313205668|ref|YP_004044845.1| tetratricopeptide tpr_1 repeat-containing protein [Riemerella anatipestifer DSM 15868] gi|312444984|gb|ADQ81339.1| Tetratricopeptide TPR_1 repeat-containing protein [Riemerella anatipestifer DSM 15868] gi|315022600|gb|EFT35626.1| TPR-domain containing protein [Riemerella anatipestifer RA-YM] gi|325336890|gb|ADZ13164.1| Tetratricopeptide TPR-1 [Riemerella anatipestifer RA-GD] Length = 986 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 76/231 (32%), Gaps = 42/231 (18%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGE 118 Y A + + +++ A YF + + + +S + + + + +A + Sbjct: 471 YWLAQTYYQLEDYPSAISYFEKLQKT--EGSLDERSQINYDLGYAYFKNKDFGKAKECFK 528 Query: 119 EYITQYPESKNVDYVYYLVGMSYA---------------QMIRDVPYDQRA--------T 155 Y+ P+++ + ++ + + Q+A T Sbjct: 529 LYLK-NPKAEFKADAELRLADTHYADNELNDAIAIYNNAETSDEYTLFQKAMALGFKGDT 587 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + + M ++V +Y NS Y A EIG Y E+ + F Sbjct: 588 EAKISEMKKLVAQYPNSEYKDDAL--------------YEIGTAYAANDEFALSSEYFDK 633 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 V+ +D A +V+ + +A + + ++Y +A V Sbjct: 634 VVKTSTDTHLVANAEIYMVQNDIEQNQEAKAFSGIKSLAKKYQNTVYADKV 684 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 66/217 (30%), Gaps = 30/217 (13%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 TD Q Y + N+ +A YF + + K+ A Y Y Sbjct: 425 TDKIEQEVAYLLGTEEFNKGNYKEAELYFKKSLKFNHNQEFYLKAQYWLAQTYYQLEDYP 484 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A S E+ + Y +G +Y + + + ++ Sbjct: 485 SAISYFEKLQKTEGSLDERSQINYDLGYAYFKN--------KDFGKAKECFKLYLKN-PK 535 Query: 172 SPYVKGARFYVTVGRNQLAAKEVE--IGRYYLK-----------------RGEYVAAIPR 212 + + A + A E+ I Y +G+ A I Sbjct: 536 AEFKADAELRLADT--HYADNELNDAIAIYNNAETSDEYTLFQKAMALGFKGDTEAKISE 593 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 + ++A Y ++E+ ++A+ + AY A + E Sbjct: 594 MKKLVAQYPNSEYKDDALYEIGTAYAANDEFALSSEY 630 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 27/202 (13%), Positives = 68/202 (33%), Gaps = 40/202 (19%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 A ++ + KA Y+ + + A ++ Y +G +A ++ Sbjct: 723 STARQLYAKKQYEKAIPYYEKYLAQNVSSNTAFQAQYELGESYYQSGDDAKALKSFN-FV 781 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 T YP DY Q + ++ ++ + + A + Sbjct: 782 TAYPN----DY-------------------QEEAR--IRSAQILLSK----NKGEEAAEH 812 Query: 182 VTVGRN-------QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA-EEAMARL 233 + + A +E+ +YY + ++ A L+L+N ++ E+A Sbjct: 813 LAKLVDSNNPKIKSFAQQELM--KYYADKKDFAKAETYAGLILSNTKNSPAVLEQAKVIK 870 Query: 234 VEAYVALALMDEAREVVSLIQE 255 + + EA++ + +++ Sbjct: 871 ARSLMNQGKDKEAQKSYTDLEK 892 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 30/231 (12%), Positives = 73/231 (31%), Gaps = 33/231 (14%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + + +++KA+ + + + +P + +L + ++ Sbjct: 566 AETSDEYTLFQKAMALGFKGDTEAKISEMKKLVAQYPNSEYKDDALYEIGTAYAANDEFA 625 Query: 112 QAASLGEEYITQYPESKNVDYV-YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 ++ ++ + ++ V Y+V D+ +Q A + + ++Y Sbjct: 626 LSSEYFDKVVKTSTDTHLVANAEIYMV-------QNDIEQNQEA--KAFSGIKSLAKKYQ 676 Query: 171 NSPYVKG--ARFYVTVGR-------NQLAAK-------------EVEIGRYYLKRGEYVA 208 N+ Y A + A + R + +Y Sbjct: 677 NTVYADKVLAVARSLYLKTGDTAGYQNFAKNLGVGLDKSEIDEINLSTARQLYAKKQYEK 736 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 AIP ++ LA + A +A L E+Y +A + + + YP Sbjct: 737 AIPYYEKYLAQNVSSNTAFQAQYELGESYYQSGDDAKALKSFNFVTA-YPN 786 Score = 39.7 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 85/240 (35%), Gaps = 40/240 (16%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVL-----FLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 + + LD+ E + + +L +++F KA E N+ + + + + Sbjct: 84 NPNAEKGLDTFIANHPNTEHFAEGQAPLADFYLIKKDFPKALEILNKLNVNHLSSSEQTQ 143 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD--YVYYLVGMSYAQMIRDVPYDQR 153 L + ++ +G + A E Y S++ + + Y++G Y + Sbjct: 144 HSLKLGYAKFMSGDSKAAIKDLE---NAYTSSEDSEKGDIAYMLGHLYYT--------EG 192 Query: 154 ATKLMLQYMSR--------------IVERYTNSP-YVKGARFYVTVGRNQLA---AKEVE 195 T +Y + V+ Y N Y + + L+ EV Sbjct: 193 QTGKAFEYFNEIKDKEKYSKIVKPYFVQMYFNDKNYDLAIAEGEMLLKENLSSSYKSEVH 252 Query: 196 --IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 IG Y +GEY AA P ++ L + +A + + + + L DEA + + Sbjct: 253 KIIGESYFMKGEYRAAYPHLKVFLDS-KEAPSESD-LYEMGFVAAQMGLYDEAVSYYNQL 310 >gi|156034555|ref|XP_001585696.1| hypothetical protein SS1G_13212 [Sclerotinia sclerotiorum 1980] gi|154698616|gb|EDN98354.1| hypothetical protein SS1G_13212 [Sclerotinia sclerotiorum 1980 UF-70] Length = 471 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 40/137 (29%), Gaps = 23/137 (16%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + ++ KA E + + P + ++ + Y A + Sbjct: 13 NEGNKAFAAHDWPKAIELYTKAIELDDQKP-TYYSNRAQ-----ANIKSEAYGYAIADAT 66 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + I P YY ++Y +++ K L+ +V++ N A Sbjct: 67 KAIELDPNFVK---AYYRRAVAYTAILKS--------KEALRDFKTVVKKAPNDK---DA 112 Query: 179 RFYVTVGRNQLAAKEVE 195 + + + E Sbjct: 113 KLKLAECEKIVKRIEFF 129 >gi|88800187|ref|ZP_01115755.1| hypothetical protein MED297_13857 [Reinekea sp. MED297] gi|88777033|gb|EAR08240.1| hypothetical protein MED297_13857 [Reinekea sp. MED297] Length = 248 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 54/154 (35%), Gaps = 9/154 (5%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 +A V +S + ++TD E Y A + ++ F ++ ++ P Sbjct: 102 VANAPAVSSPSESLDESQQAAMTDEEILAE-YNAAKALMLDKKFDESISKLAIFAKKHPD 160 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + ++A + + ++ Y E V Y +G+ + Sbjct: 161 HPLTPNAWYWIGEIYLVQRNNEEAQNAFQRIVSDYSEHDKVPDSLYKLGV--------IA 212 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 T+ Y R+++ Y N+ K A+ + Sbjct: 213 QQSSQTQQASAYFERVIQNYPNTQSAKLAKARLE 246 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 48/139 (34%), Gaps = 22/139 (15%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + +A K+ ++ S + ++P+ +Y +G Y QR Sbjct: 130 AEYNAAKALMLDKKFDESISKLAIFAKKHPDHPLTPNAWYWIGEIY--------LVQRNN 181 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + RIV Y+ V + + + V Q + + F+ Sbjct: 182 EEAQNAFQRIVSDYSEHDKVPDSLYKLGVIAQQSSQTQQA--------------SAYFER 227 Query: 216 VLANYSDAEHAEEAMARLV 234 V+ NY + + A+ A ARL Sbjct: 228 VIQNYPNTQSAKLAKARLE 246 >gi|295085535|emb|CBK67058.1| Uncharacterized protein conserved in bacteria [Bacteroides xylanisolvens XB1A] Length = 1005 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 34/80 (42%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +YEK ++ N ++A F + +P + V+RK+ + Y G Y Sbjct: 614 PASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDY 673 Query: 111 QQAASLGEEYITQYPESKNV 130 QA ++ I +YP S+ Sbjct: 674 NQAIEAYKQVIEKYPGSEEA 693 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 72/214 (33%), Gaps = 28/214 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y + +++++A YF + + +A + +++A Sbjct: 513 YNLGYIAFHRKDYTQASNYFQKYIQLEKGENATALA-DAYNRIGDCHLHVRNFEEAKQYY 571 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + S DY +Y + + + ++R+V +Y SPY Sbjct: 572 SQAEQMNTSS--GDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPASPYAVN 621 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A E GR Y+ AI F+ +L Y ++ + +A A + Y Sbjct: 622 AI--------------YEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLY 667 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++A E + E+YP AR +K Sbjct: 668 YQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 75/267 (28%), Gaps = 55/267 (20%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 +C + D T +Y++ +E+N++ A + P A Sbjct: 9 ICAAICCTPIIGFAQTGDKFTST---DNLYKEGKELFQERNYAAALPALKAFVKQKPAAS 65 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--------- 142 + + + M Y + L +Y+ +YP++ + +Y L+ Y Sbjct: 66 LLQDAEYMLVSSAYELKDKNR-IELLRKYLDRYPDTPYANRIYALLASCYFYEGKYDEAL 124 Query: 143 --------QMIRDVPYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYV 182 ++ + D + + + Y K +Y+ Sbjct: 125 ALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYL 182 Query: 183 TVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + R I Y + Y A Q L+ Y + Sbjct: 183 SYIRYTQKRYSEALKGFLPLQDDSKYKALVPYYIAEIYTQLKNYDKAQIVAQNYLSAYPN 242 Query: 223 AEHAEEAMARLVEAYVALALMDEAREV 249 EHA E L +AY +A E Sbjct: 243 NEHAAEMYRILGDAYYHFGQYHQAVEA 269 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 47/125 (37%), Gaps = 8/125 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A++ +++++ N+ +P + A ++ QA + +E Sbjct: 587 YQLALVSGLQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKEL 646 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +T+YPES +G+ Y Q ++ +++E+Y S + A Sbjct: 647 LTKYPESPVSRKAAAEIGLLYYQK--------GDYNQAIEAYKQVIEKYPGSEEARLAMR 698 Query: 181 YVTVG 185 + Sbjct: 699 DLKSI 703 Score = 42.4 bits (99), Expect = 0.065, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 28/190 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A +LK N +A +F + P A+ ++++Y+ +Y +A + + Sbjct: 145 YQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYLSYIRYTQKRYSEAL---KGF 199 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +SK V Y + Y Q+ + + Y N+ + Sbjct: 200 LPLQDDSKYKALVPYYIAEIYTQL--------KNYDKAQIVAQNYLSAYPNNEHAAEMYR 251 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + G Y G+Y A+ F L + +A+ L +Y Sbjct: 252 IL--------------GDAYYHFGQYHQAVEAFNNYLNK-DHSAPRRDALYMLGLSYYQT 296 Query: 241 ALMDEAREVV 250 + +A E + Sbjct: 297 KVYSKAAETL 306 Score = 42.4 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 77/220 (35%), Gaps = 36/220 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A ++ + +N+ KA +P A + + Y G+Y QA Y Sbjct: 214 YYIAEIYTQLKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEAFNNY 273 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + + + D Y++G+SY Q + + + ++ N + A Sbjct: 274 LNKDHSAPRRD-ALYMLGLSYYQT--------KVYSKAAETLGKVTTD--NDALTQNAYL 322 Query: 181 YVTVGRNQLAAK---------------EVEI---GRYYL-------KRGEYVAAIPRFQL 215 ++ + QLA K ++I Y + ++ F+ Sbjct: 323 HMGLSYLQLAEKNKARMAFEQAAASNTNMQIKEQAAYNYALCLHETSFSAFGESVTAFEK 382 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 L + + +AE+ + LVE Y+ D A + + I + Sbjct: 383 FLNEFPTSPYAEKVSSYLVEVYMNTRSYDAALKSIDRIAK 422 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 50/167 (29%), Gaps = 22/167 (13%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + YL+ + +Y + + + + +SKA E + + D + + + L Sbjct: 271 NNYLNKDHSAPRRDALYMLGLSYYQTKVYSKAAETLGKVTTDN--DALTQNAYLHMGLSY 328 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + +A E+ + + Y + + A + + Sbjct: 329 LQLAEKNKARMAFEQAAASNTNMQIKEQAAYNYALCLHETSFS------AFGESVTAFEK 382 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + SPY + Y+ Y+ Y AA+ Sbjct: 383 FLNEFPTSPYAEKVSSYLVEV--------------YMNTRSYDAALK 415 >gi|300937785|ref|ZP_07152582.1| tol-pal system protein YbgF [Escherichia coli MS 21-1] gi|300457196|gb|EFK20689.1| tol-pal system protein YbgF [Escherichia coli MS 21-1] Length = 263 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F +++P Sbjct: 116 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 176 STFLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 228 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTFLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S ++ A +++ Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTFLPNANYWLGQLN----------- 190 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 >gi|116075659|ref|ZP_01472918.1| TPR repeat [Synechococcus sp. RS9916] gi|116066974|gb|EAU72729.1| TPR repeat [Synechococcus sp. RS9916] Length = 734 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 27/247 (10%), Positives = 66/247 (26%), Gaps = 57/247 (23%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSR 85 A+C + G + + + Y Y + ++ + + A +N+ Sbjct: 71 LAALCGMQGRFSELIKLLRRTLEIKPNYPEAHYNLGLALKEQGDLTAAIASYNKALQLRP 130 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 ++P ++ G A + + P + +G+ + Sbjct: 131 NYP------EAHNNLGNAYKDQGDLTAAIASYNSALQLNPNDPET---HNNLGVVLKKQG 181 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 D A ++ Y A + I + ++G+ Sbjct: 182 -----DPTAAITSYHQALQLQPNYPE------------------AHYNLGIA--FKEQGD 216 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA--LMDEAREVVSL--------IQE 255 AAI + L + + Y L L ++ ++ ++ Sbjct: 217 LTAAIASYNKALQLKPND----------ADTYNNLGNALKEQGDLTAAIDSFNKALQLKP 266 Query: 256 RYPQGYW 262 +P W Sbjct: 267 NFPDAQW 273 >gi|298480096|ref|ZP_06998295.1| TPR-domain containing protein [Bacteroides sp. D22] gi|298273905|gb|EFI15467.1| TPR-domain containing protein [Bacteroides sp. D22] Length = 1005 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 34/80 (42%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +YEK ++ N ++A F + +P + V+RK+ + Y G Y Sbjct: 614 PASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDY 673 Query: 111 QQAASLGEEYITQYPESKNV 130 QA ++ I +YP S+ Sbjct: 674 NQAIEAYKQVIEKYPGSEEA 693 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 71/214 (33%), Gaps = 28/214 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y + ++++ A YF + + +A + +++A Sbjct: 513 YNLGYIAFHRKDYTLASNYFQKYIQLEKGENATALA-DAYNRIGDCHLHVRNFEEAKQYY 571 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + S DY +Y + + + ++R+V +Y SPY Sbjct: 572 SQAEQMNTSS--GDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPASPYAVN 621 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A E GR Y+ AI F+ +L Y ++ + +A A + Y Sbjct: 622 AI--------------YEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLY 667 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++A E + E+YP AR +K Sbjct: 668 YQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 81/251 (32%), Gaps = 20/251 (7%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 +C + D T +Y++ +E+N++ A + P A Sbjct: 9 ICAAICCTPIIGFAQTGDKFTST---DNLYKEGKELFQEKNYAAALPALKAFVKQKPAAS 65 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--------- 142 + + + M Y + L +Y+ +YP++ + +Y L+ Y Sbjct: 66 LLQDAEYMLVSSAYELRDKNR-IELLRKYLDRYPDTPYANRIYALLASCYFYEEKYDEAL 124 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + D + ++ Y + ++ A + R + YYL Sbjct: 125 ALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANSPKYAKD-CDYYLS 183 Query: 203 RGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 Y R+ L + D+++ + E YV L D+A+ V YP Sbjct: 184 YIRYTQ--KRYSEALKGFLPLQDDSKYKALVPYYIAEIYVQLKNYDKAQIVAQNYLSAYP 241 Query: 259 QGYWARYVETL 269 +A + + Sbjct: 242 NNEYAAEMYRI 252 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 47/125 (37%), Gaps = 8/125 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A++ +++++ N+ +P + A ++ QA + +E Sbjct: 587 YQLALVSGLQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKEL 646 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +T+YPES +G+ Y Q ++ +++E+Y S + A Sbjct: 647 LTKYPESPVSRKAAAEIGLLYYQK--------GDYNQAIEAYKQVIEKYPGSEEARLAMR 698 Query: 181 YVTVG 185 + Sbjct: 699 DLKSI 703 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 66/190 (34%), Gaps = 28/190 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A +LK N +A +F + P A+ ++++Y+ +Y +A + + Sbjct: 145 YQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYLSYIRYTQKRYSEAL---KGF 199 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +SK V Y + Y Q+ + + Y N+ Y + Sbjct: 200 LPLQDDSKYKALVPYYIAEIYVQL--------KNYDKAQIVAQNYLSAYPNNEYAAEM-Y 250 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + G Y G+Y A+ F L + +A+ L +Y Sbjct: 251 RIQ-------------GDVYYHFGQYHQAVEAFNNYLNK-DHSAPRRDALYMLGLSYYQT 296 Query: 241 ALMDEAREVV 250 + +A E + Sbjct: 297 KVYSKAAETL 306 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 50/167 (29%), Gaps = 22/167 (13%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + YL+ + +Y + + + + +SKA E + + D + + + L Sbjct: 271 NNYLNKDHSAPRRDALYMLGLSYYQTKVYSKAAETLGKVTTDN--DALTQNAYLHMGLSY 328 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + +A E+ + + Y + + A + + Sbjct: 329 LQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFS------AFGESVTAFEK 382 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + SPY + Y+ Y+ Y AA+ Sbjct: 383 FLNEFPTSPYAEKVSSYLVEV--------------YMNTRSYDAALK 415 >gi|237717254|ref|ZP_04547735.1| TPR domain-containing protein [Bacteroides sp. D1] gi|262406021|ref|ZP_06082571.1| TPR domain-containing protein [Bacteroides sp. 2_1_22] gi|294806889|ref|ZP_06765714.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC 1b] gi|229443237|gb|EEO49028.1| TPR domain-containing protein [Bacteroides sp. D1] gi|262356896|gb|EEZ05986.1| TPR domain-containing protein [Bacteroides sp. 2_1_22] gi|294445918|gb|EFG14560.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC 1b] Length = 1005 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 34/80 (42%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +YEK ++ N ++A F + +P + V+RK+ + Y G Y Sbjct: 614 PASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDY 673 Query: 111 QQAASLGEEYITQYPESKNV 130 QA ++ I +YP S+ Sbjct: 674 NQAIEAYKQVIEKYPGSEEA 693 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 72/214 (33%), Gaps = 28/214 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y + +++++A YF + + +A + +++A Sbjct: 513 YNLGYIAFHRKDYTQASNYFQKYIQLEKGENATALA-DAYNRIGDCHLHVRNFEEAKQYY 571 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + S DY +Y + + + ++R+V +Y SPY Sbjct: 572 SQAEQMNTSS--GDYSFYQLALVSGLQKDYTGK--------ITLLNRLVGKYPASPYAVN 621 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A E GR Y+ AI F+ +L Y ++ + +A A + Y Sbjct: 622 AI--------------YEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKAAAEIGLLY 667 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++A E + E+YP AR +K Sbjct: 668 YQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 75/267 (28%), Gaps = 55/267 (20%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 +C + D T +Y++ +E+N++ A + P A Sbjct: 9 ICAAICCTPIIGFAQTGDKFTST---DNLYKEGKELFQERNYAAALPALKAFVKQKPAAS 65 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--------- 142 + + + M Y + L +Y+ +YP++ + +Y L+ Y Sbjct: 66 LLQDAEYMLVSSAYELKDKNR-IELLRKYLDRYPDTPYANRIYALLASCYFYEGKYDEAL 124 Query: 143 --------QMIRDVPYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYV 182 ++ + D + + + Y K +Y+ Sbjct: 125 ALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYL 182 Query: 183 TVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + R I Y + Y A Q L+ Y + Sbjct: 183 SYIRYTQKRYSEALKGFLPLQDDSKYKALVPYYIAEIYTQLKNYDKAQIVAQNYLSAYPN 242 Query: 223 AEHAEEAMARLVEAYVALALMDEAREV 249 EHA E L +AY +A E Sbjct: 243 NEHAAEMYRILGDAYYHFGQYHQAVEA 269 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 47/125 (37%), Gaps = 8/125 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A++ +++++ N+ +P + A ++ QA + +E Sbjct: 587 YQLALVSGLQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKEL 646 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +T+YPES +G+ Y Q ++ +++E+Y S + A Sbjct: 647 LTKYPESPVSRKAAAEIGLLYYQK--------GDYNQAIEAYKQVIEKYPGSEEARLAMR 698 Query: 181 YVTVG 185 + Sbjct: 699 DLKSI 703 Score = 43.2 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 77/220 (35%), Gaps = 36/220 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A ++ + +N+ KA +P A + + Y G+Y QA Y Sbjct: 214 YYIAEIYTQLKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEAFNNY 273 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + + + D Y++G+SY Q + + + ++ N + A Sbjct: 274 LNKDRSAPRRD-ALYMLGLSYYQT--------KVYSKAAETLGKVTTD--NDALTQNAYL 322 Query: 181 YVTVGRNQLAAK---------------EVEI---GRYYL-------KRGEYVAAIPRFQL 215 ++ + QLA K ++I Y + ++ F+ Sbjct: 323 HMGLSYLQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFSAFGESVTAFEK 382 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 L + + +AE+ + LVE Y+ D A + + I + Sbjct: 383 FLNEFPTSPYAEKVSSYLVEVYMNTRSYDAALKSIDRIAK 422 Score = 42.8 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 28/190 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A +LK N +A +F + P A+ ++++Y+ +Y +A + + Sbjct: 145 YQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYLSYIRYTQKRYSEAL---KGF 199 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +SK V Y + Y Q+ + + Y N+ + Sbjct: 200 LPLQDDSKYKALVPYYIAEIYTQL--------KNYDKAQIVAQNYLSAYPNNEHAAEMYR 251 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + G Y G+Y A+ F L + +A+ L +Y Sbjct: 252 IL--------------GDAYYHFGQYHQAVEAFNNYLNK-DRSAPRRDALYMLGLSYYQT 296 Query: 241 ALMDEAREVV 250 + +A E + Sbjct: 297 KVYSKAAETL 306 Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 50/167 (29%), Gaps = 22/167 (13%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + YL+ + +Y + + + + +SKA E + + D + + + L Sbjct: 271 NNYLNKDRSAPRRDALYMLGLSYYQTKVYSKAAETLGKVTTDN--DALTQNAYLHMGLSY 328 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + +A E+ + + Y + + A + + Sbjct: 329 LQLAEKNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFS------AFGESVTAFEK 382 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + SPY + Y+ Y+ Y AA+ Sbjct: 383 FLNEFPTSPYAEKVSSYLVEV--------------YMNTRSYDAALK 415 >gi|182412289|ref|YP_001817355.1| hypothetical protein Oter_0465 [Opitutus terrae PB90-1] gi|177839503|gb|ACB73755.1| hypothetical protein Oter_0465 [Opitutus terrae PB90-1] Length = 446 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 79/195 (40%), Gaps = 17/195 (8%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCS--RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +E A + ++++A +++++ P ++ SA+ AG + AA+ Sbjct: 196 FEVAETHFQNGDYAEANKFYSRLRMLDLAP--EDRARAQFKSAYSLQLAGDNEGAANGLR 253 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +I Q+P+ +NV YL+ S +R + Q A L + ER +S K Sbjct: 254 SFIEQWPDDENVPQARYLLASS----LRTLNRPQEALTATLDLLR--AERSRSSADSKRW 307 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 ++ NQLA + + G+ + A+ + + A D ++ + Y Sbjct: 308 AYWQRRTGNQLANG-------FFQNGDILNALAIYHGLAALSDDPVWRIPVTYQIAQCYE 360 Query: 239 ALALMDEAREVVSLI 253 L +D A + +I Sbjct: 361 RLGDLDRATKTYRVI 375 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 63/219 (28%), Gaps = 51/219 (23%) Query: 69 KEQNFSKA-YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 + +F A Y P + +LL A + G +AA++ E ++ +P Sbjct: 83 ERGDFDAAEIAYRQVLDGKAPL-ETTQAALLGLAHMHRKQGALTKAAAIYERFLKDFPSD 141 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE-------------------- 167 V +G + D A +L + ++ Sbjct: 142 DRVPDALLELGRTL--------RDMGAPRLAISRFYNVINSTLKLPANHGFEHYQLLAKT 193 Query: 168 --------RYTNSPYVKGARFYVTVGRNQ-LAAKEVEIGRYYLKRGEYV--------AAI 210 + N Y A + + R LA ++ ++ + Y A Sbjct: 194 AQFEVAETHFQNGDYA-EANKFYSRLRMLDLAPEDRARAQF---KSAYSLQLAGDNEGAA 249 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 + + + D E+ +A L + L EA Sbjct: 250 NGLRSFIEQWPDDENVPQARYLLASSLRTLNRPQEALTA 288 Score = 38.6 bits (89), Expect = 0.87, Method: Composition-based stats. Identities = 18/143 (12%), Positives = 36/143 (25%), Gaps = 22/143 (15%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-------QCSRDFPFAGV---ARKSLL 98 D +D R + E A F + + F A+ + Sbjct: 137 DFPSDDRVPDALLELGRTLRDMGAPRLAISRFYNVINSTLKLPANHGFEHYQLLAKTAQF 196 Query: 99 MSAFVQYSAGKYQQAASLGEE--YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 A + G Y +A + PE + + + + Sbjct: 197 EVAETHFQNGDYAEANKFYSRLRMLDLAPED---------RARAQFKSAYSLQL-AGDNE 246 Query: 157 LMLQYMSRIVERYTNSPYVKGAR 179 + +E++ + V AR Sbjct: 247 GAANGLRSFIEQWPDDENVPQAR 269 >gi|159900735|ref|YP_001546982.1| TPR repeat-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159893774|gb|ABX06854.1| Tetratricopeptide TPR_2 repeat protein [Herpetosiphon aurantiacus ATCC 23779] Length = 1757 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 77/209 (36%), Gaps = 26/209 (12%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + +Y++A L+ +A FP+ A + + +A Sbjct: 7 QALYDEARSALETGKEERAIGASEHLLESFPYYLEAYRI---LGESYLNRQDLAKAVEAF 63 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E + P +N+ V+ +G++Y + Q ++ + E + P ++ Sbjct: 64 ERVLRSDP--ENIP-VHVGLGVTYER--------QGNLAAAIREFEQAFEIKPDLPELRS 112 Query: 178 ARFYV-------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 + R L K+ +GR Y++ + AI F VLA+ D + + A+ Sbjct: 113 QVLRLYTEAWGSENARILL--KKAGLGRMYVRGRRFDKAIQEFNDVLAD--DPKRVDIAV 168 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQ 259 A L EA EA EV S I YP Sbjct: 169 A-LAEALWRNGQEAEAAEVASDILRDYPD 196 >gi|330444094|ref|YP_004377080.1| TPR domain-containing protein [Chlamydophila pecorum E58] gi|328807204|gb|AEB41377.1| TPR domain protein [Chlamydophila pecorum E58] Length = 329 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 64/183 (34%), Gaps = 37/183 (20%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 +V + +Y KA L + +++ ++A + + + FPF ++ K+ Sbjct: 169 DEVLTAFPNQDLGAQALYSKADLLIVKKDLAEAIKILKKLTLQFPFHSLSPKA------- 221 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 ++ S+ Y Q + P++ + L Sbjct: 222 ----------------FVRL---SE-----------IYLQQAQKEPHNVQYLSLAKINEE 251 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 +++++ N P + V + AA GR+Y K+ ++ AA +Q L +Y Sbjct: 252 AMLKQHPNHPLNQVVSANVLQMCERYAAGLYSTGRFYEKKKKHSAAKIYYQTALEHYPQT 311 Query: 224 EHA 226 Sbjct: 312 SLV 314 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 36/224 (16%), Positives = 76/224 (33%), Gaps = 38/224 (16%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T E + + +FL+ Q++ +A F S FP + ++L + + G+ Sbjct: 47 KFTPKYSAEEYFSQGQVFLERQHYRRALLCFGMISHHFPSHTLHSQALFFTGKCYFELGQ 106 Query: 110 YQQAASLGEEYITQYPESKNVDY------VYYLVGMSYAQ-------MIRDVPYDQRATK 156 A Y+ Q + +Y + Y + S+A ++ P A + Sbjct: 107 PDLADKAFAIYLQQ----PDAEYSEELFSIKYAIAESFAHGKRKHLFLLEGFPKLGNADE 162 Query: 157 LMLQYMSRIVERYTNSPYVKGA---RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 L+ ++ + N A + + + + LA AI Sbjct: 163 DALRIYDEVLTAFPNQDLGAQALYSKADLLIVKKDLAE-----------------AIKIL 205 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256 + + + + +A RL E Y+ A + + +SL + Sbjct: 206 KKLTLQFPFHSLSPKAFVRLSEIYLQQAQKEPHNVQYLSLAKIN 249 Score = 35.5 bits (81), Expect = 9.3, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A + G+ +L+R Y A+ F ++ ++ +A+ + Y L D A + Sbjct: 54 AEEYFSQGQVFLERQHYRRALLCFGMISHHFPSHTLHSQALFFTGKCYFELGQPDLADKA 113 Query: 250 VSLIQERYPQGYWARYVETL 269 ++ ++ P ++ + ++ Sbjct: 114 FAIYLQQ-PDAEYSEELFSI 132 >gi|332298580|ref|YP_004440502.1| hypothetical protein Trebr_1953 [Treponema brennaborense DSM 12168] gi|332181683|gb|AEE17371.1| hypothetical protein Trebr_1953 [Treponema brennaborense DSM 12168] Length = 1046 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 57/162 (35%), Gaps = 22/162 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A+L +K + + +A F R FP +A + Y+A Y+ AA Y Sbjct: 732 YRSALLLVKRKQYDEADALFADVERSFPTESLAEDASYRRGESYYTAEAYETAAGRFASY 791 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP K D Y +A++ + ++ + S + G+ Sbjct: 792 RRTYPRGKYADAASYFGADCFARI--------GQPDQAILLYESLLSSFPASTFAYGSLS 843 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + Y ++GEY AA+ + VL Y D Sbjct: 844 ALIPL--------------YREKGEYAAALRCARAVLQRYGD 871 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 55/195 (28%), Gaps = 26/195 (13%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPF----AGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + A Y P+ + SA + +Y +A +L + Sbjct: 697 LFAAGVYDDAGAYEAALDLMKPYLSRQSPFGMNCRYRSALLLVKRKQYDEADALFADVER 756 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 +P + Y G SY A + + Y Y A Sbjct: 757 SFPTESLAEDASYRRGESYYTA--------EAYETAAGRFASYRRTYPRGKYADAAS--- 805 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 + + G+ AI ++ +L+++ + A +++ L+ Y Sbjct: 806 -----------YFGADCFARIGQPDQAILLYESLLSSFPASTFAYGSLSALIPLYREKGE 854 Query: 243 MDEAREVVSLIQERY 257 A + +RY Sbjct: 855 YAAALRCARAVLQRY 869 Score = 38.9 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 29/83 (34%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 DV T+ + Y + + + + A F R +P A + A Sbjct: 753 DVERSFPTESLAEDASYRRGESYYTAEAYETAAGRFASYRRTYPRGKYADAASYFGADCF 812 Query: 105 YSAGKYQQAASLGEEYITQYPES 127 G+ QA L E ++ +P S Sbjct: 813 ARIGQPDQAILLYESLLSSFPAS 835 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 14/107 (13%), Positives = 30/107 (28%), Gaps = 14/107 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + + + A + G Y Y A RF Sbjct: 746 EADALFADVERSFPTESLAEDASYRR--------------GESYYTAEAYETAAGRFASY 791 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 Y ++A+ A + + + D+A + + +P +A Sbjct: 792 RRTYPRGKYADAASYFGADCFARIGQPDQAILLYESLLSSFPASTFA 838 >gi|195953342|ref|YP_002121632.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp. Y04AAS1] gi|195932954|gb|ACG57654.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp. Y04AAS1] Length = 890 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 17/166 (10%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 +A +L E +R+V + + +Y +Y + + + ++ A YF + Sbjct: 504 ILLAKAYLSIDEPAKAREVLKPTTAEAKY---LY--GLSYFIQDDYQDAIRYFKEIVSSK 558 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 F ++LL Y+ G +A ++ + YP SK Y + S Sbjct: 559 RFGA---RALLKLGDAYYNLGDINKAIYYYQKVVENYPNSKEAMEASYDIISS------- 608 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + +K + + + +ERY N+P + ++ + + KE Sbjct: 609 --RIKNPSKNLEVAIKQFIERYKNNPLSEDLKYQLANIYIKQGKKE 652 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 58/176 (32%), Gaps = 42/176 (23%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A+++ ++ + + LL A S + +A + + Sbjct: 475 YYRAIVYFNMGDYKDVIRLLENP------STYDERILL--AKAYLSIDEPAKAREVLK-- 524 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YL G+SY Q + ++Y IV + Sbjct: 525 -------PTTAEAKYLYGLSYF--------IQDDYQDAIRYFKEIV-----------SSK 558 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 A +++G Y G+ AI +Q V+ NY +++ A EA ++ + Sbjct: 559 RFG------ARALLKLGDAYYNLGDINKAIYYYQKVVENYPNSKEAMEASYDIISS 608 Score = 39.7 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 65/233 (27%), Gaps = 77/233 (33%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDF---------------------PFAGVARKSLLM 99 Y + + K ++ KA YF + P + + LL Sbjct: 452 YYEGWYYFKLGDYQKALTYFT---SRYYRAIVYFNMGDYKDVIRLLENP-STYDERILL- 506 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR------------- 146 A S + +A + + YL G+SY Sbjct: 507 -AKAYLSIDEPAKAREVLK---------PTTAEAKYLYGLSYFIQDDYQDAIRYFKEIVS 556 Query: 147 -------------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 D Y+ + Y ++VE Y NS A + + R + +K Sbjct: 557 SKRFGARALLKLGDAYYNLGDINKAIYYYQKVVENYPNSKEAMEASYDIISSRIKNPSKN 616 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +E+ + + Y + +E+ +L Y+ ++A Sbjct: 617 LEVA---------------IKQFIERYKNNPLSEDLKYQLANIYIKQGKKEKA 654 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y + +Y AI F+ ++++ A+ +L +AY L +++A + E YP Sbjct: 538 YFIQDDYQDAIRYFKEIVSS---KRFGARALLKLGDAYYNLGDINKAIYYYQKVVENYPN 594 Query: 260 GY 261 Sbjct: 595 SK 596 >gi|327540469|gb|EGF27054.1| hypothetical protein RBWH47_05644 [Rhodopirellula baltica WH47] Length = 385 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 85/223 (38%), Gaps = 21/223 (9%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + D ++ +++ + L + A +Q D P +A + + +A G Sbjct: 151 ATQDDWFKFNLFDASRPRLDAE--GHAVRVLDQIRYDNPTGRLADDATMAAAVEYMRQGD 208 Query: 110 YQQAASLGEEYIT----QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 ++ +E++T +PES + + + ++ Y + + + + Sbjct: 209 FE----TADEFLTDLRETFPESDHFFNAHLMGIRCKLEVFAGPKYSGLMLEEADKLVRQT 264 Query: 166 VERYTN-------SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ER+ + S V A V R A K + Y KR EY AA +Q++L Sbjct: 265 RERFPDRLRDPETSEMVARAAAEVAYRR---AEKLNDRAIYREKRSEYGAARLHYQMILR 321 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +Y A+ A RL EA + + R +L++ +P Sbjct: 322 DYPSTPFADRARQRL-EAITSYPDVPAERVSATLLKRIFPDSR 363 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 43/103 (41%), Gaps = 19/103 (18%) Query: 50 SVTDVRYQREVYEKAVLFL-------------------KEQNFSKAYEYFNQCSRDFPFA 90 + R++Y++A ++++F++A + F + + P Sbjct: 32 EQPNAERARDLYQEADQLFRGAASRFNQTERDGEAEGTEKKDFARAAKLFARAADAQPGT 91 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 +A+ ++ M A + + + AA + E ++P +++VD Sbjct: 92 ALAQDAMFMQAESLFFSDQLPDAADVYERLNKEFPNNRHVDQA 134 >gi|269139916|ref|YP_003296617.1| hypothetical protein ETAE_2571 [Edwardsiella tarda EIB202] gi|267985577|gb|ACY85406.1| hypothetical protein ETAE_2571 [Edwardsiella tarda EIB202] gi|304559751|gb|ADM42415.1| TPR repeat containing exported protein [Edwardsiella tarda FL6-60] Length = 221 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 9/123 (7%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y +AV L ++ +A F + +P + + + YS GK AA Sbjct: 106 YNRAVDLVLVKKQNDQAISAFQTFIKQYPDSTYQPNANYWLGQLFYSKGKKDDAAYYYAV 165 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S Y VG+ + ++ T +++++Y NS K A+ Sbjct: 166 VVKNYPKSPKAAESMYKVGV--------IMQEKGQTDKANAVYQQVIKQYPNSDAAKLAQ 217 Query: 180 FYV 182 + Sbjct: 218 KRM 220 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 48/131 (36%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + D+ ++ + +++Y +S Y A +++ Sbjct: 102 ANADYNRAVDLVLVKKQNDQAISAFQTFIKQYPDSTYQPNANYWLGQL------------ 149 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +Y K + AA + +V+ NY + A E+M ++ D+A V + ++Y Sbjct: 150 -FYSKGKKDDAA-YYYAVVVKNYPKSPKAAESMYKVGVIMQEKGQTDKANAVYQQVIKQY 207 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 208 PNSDAAKLAQK 218 >gi|313157937|gb|EFR57343.1| tetratricopeptide repeat protein [Alistipes sp. HGB5] Length = 994 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 74/214 (34%), Gaps = 26/214 (12%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKY 110 ++ Y +Y + ++A F + +P + ++YS ++ Sbjct: 498 SEKEYAMALYNLGYCAFSRMDMAQARGSFEKFLAVYPARDRYRADACNRLGDIRYSDREF 557 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + A + + Y Y ++ + R T+ Q + +I+ Sbjct: 558 EAAVAEYDRAAAL--GGPEKYYAQYKRAVTLGILGR--------TEQKQQALRQIIAA-G 606 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 Y A + +GR+ +A +Y + + +A+Y + +A+ Sbjct: 607 EGDYADEASY--ELGRSHIAQ------------EQYAEGAAQLEKFVADYPSSPRRAQAL 652 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 + L AY+ L +++ ++ E PQ A+ Sbjct: 653 SDLGLAYLNLGDKEKSLRYYDMVVETAPQSSEAK 686 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 62/192 (32%), Gaps = 38/192 (19%) Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 A ++ + +Y + A+ E+++ YP S +G++Y + Sbjct: 608 GDYADEASYELGRSHIAQEQYAEGAAQLEKFVADYPSSPRRAQALSDLGLAYLNL----- 662 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG------------------------ 185 + L+Y +VE S KGA + Sbjct: 663 ---GDKEKSLRYYDMVVETAPQSSEAKGAMEGIREIYVSEGRVDDYFDYAQKAGLESDLT 719 Query: 186 ---RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 R+ L+ + G+ AA + + +Y + +A+ L + Y+ Sbjct: 720 AVSRDSLS---FASAQKLYLAGQTDAAAKSLRSYVKSYPKGYYVNDALYFLSDCYLRSDQ 776 Query: 243 MDEAREVVSLIQ 254 D+A E ++ + Sbjct: 777 RDDAIETLTTLA 788 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 20/60 (33%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K L F+ A + +P + ++ + Y++ Y A + + Sbjct: 357 YGKLQYELGGGAFNGAINVLTRYVEQYPSSPRVGEARTLLIAAYYNSNDYDAAYRAIKSF 416 >gi|163854238|ref|YP_001642281.1| tol-pal system protein YbgF [Methylobacterium extorquens PA1] gi|163665843|gb|ABY33210.1| tol-pal system protein YbgF [Methylobacterium extorquens PA1] Length = 341 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 8/88 (9%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 ++ +A+ +Y+QA ++I +P + V Y +G SY Q R Sbjct: 216 QADFEAAYALIRERQYEQAEMSLRQFIQSHPRDRLVPKATYWLGESYLQRSRS------- 268 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYV 182 + + ++ Y NSP A + Sbjct: 269 -REAAEQFLKVSTDYANSPVAPEAMLKL 295 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 44/107 (41%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R + + + ++ + V A +++ G YL+R A + Sbjct: 229 RQYEQAEMSLRQFIQSHPRDRLVPKATYWL--------------GESYLQRSRSREAAEQ 274 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F V +Y+++ A EAM +L + AL +A ++ ++ ++P Sbjct: 275 FLKVSTDYANSPVAPEAMLKLGTSLHALGAKAQACATLAEVERKFPS 321 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 13/108 (12%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 D + Y +L+ +A E F + S D+ + VA +++L ++ G Sbjct: 246 PRDRLVPKATYWLGESYLQRSRSREAAEQFLKVSTDYANSPVAPEAMLKLGTSLHALGAK 305 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 QA + E ++P + A + + V +Q+ + Sbjct: 306 AQACATLAEVERKFPS-------------ANAIVRQGVEREQKRARCA 340 >gi|332286924|ref|YP_004418835.1| exported protein [Pusillimonas sp. T7-7] gi|330430877|gb|AEC22211.1| exported protein [Pusillimonas sp. T7-7] Length = 227 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 54/146 (36%), Gaps = 10/146 (6%) Query: 42 SSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 +S+D + V +E YE + + + +A F+ + +P + +A ++ Sbjct: 90 ASQDQTGGNTPQVADPQEQAAYEGPMGLFRSGKYKEAAASFDDFLQAYPNSQLAPEARFY 149 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 +Y++ ++ + + I P+ ++ S ++ Sbjct: 150 QGSSRYASKDFKGSIQGLQAMIEASPQDPRAPDALLVIAASQIELGNMAG--------AK 201 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVG 185 + +IV+ Y N+ + A+ + + Sbjct: 202 SSLQKIVKDYPNTSAAETAKSRLKLL 227 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 38/121 (31%), Gaps = 24/121 (19%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY-----LKRGEYVAAI 210 K ++ Y NS A R+Y ++ +I Sbjct: 124 KEAAASFDDFLQAYPNSQLAPEA-------------------RFYQGSSRYASKDFKGSI 164 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 Q ++ A +A+ + + + L M A+ + I + YP A ++ + Sbjct: 165 QGLQAMIEASPQDPRAPDALLVIAASQIELGNMAGAKSSLQKIVKDYPNTSAAETAKSRL 224 Query: 271 K 271 K Sbjct: 225 K 225 >gi|149915622|ref|ZP_01904148.1| hypothetical protein RAZWK3B_06692 [Roseobacter sp. AzwK-3b] gi|149810514|gb|EDM70357.1| hypothetical protein RAZWK3B_06692 [Roseobacter sp. AzwK-3b] Length = 282 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 17/155 (10%), Positives = 49/155 (31%), Gaps = 10/155 (6%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 S + Q S ++ + +++A L + A E F + +P Sbjct: 131 SASGASGAALSAQPSEGGEPEAPQLAVSEEADFKRAKEALDAGEHAAAAEQFATFQQTYP 190 Query: 89 FAGVARKSLLMSAFVQYSAGK-YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 + ++ L+ + G+ + A + + + + + +G + + Sbjct: 191 GGPLTARAGLLRGQALEAGGQMKEAARAYLDTFSSDN-NGPEAAEALFRLGSALGAL--- 246 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 T+ ++ + R+ V A+ + Sbjct: 247 -----GQTEQACVTLAEVGNRFPGDSAVGQAQAAM 276 Score = 35.5 bits (81), Expect = 9.3, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 35/117 (29%), Gaps = 28/117 (23%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 D + + + Y P A L RG+ + A Sbjct: 170 LDAGEHAAAAEQFATFQQTYPGGPLTARAG---------------------LLRGQALEA 208 Query: 210 IPRFQLVLANYSDA-------EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + + Y D A EA+ RL A AL ++A ++ + R+P Sbjct: 209 GGQMKEAARAYLDTFSSDNNGPEAAEALFRLGSALGALGQTEQACVTLAEVGNRFPG 265 >gi|312375603|gb|EFR22941.1| hypothetical protein AND_13952 [Anopheles darlingi] Length = 511 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 22/156 (14%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFV 103 + + E+ + F KEQN+ KA E + + P A +S F Sbjct: 21 NESAPENPLQKKADELGARGNDFFKEQNYEKAIELYTEAIEVCPNERFYANRS-----FA 75 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + Y A + ++ I KN Y YY + + R K L Sbjct: 76 HFRTEAYGYALADADKAIAL----KNS-YTKAYYRRAAAMMALGR--------FKKALAD 122 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLA-AKEVEI 196 + + +R +S + N++A K + + Sbjct: 123 LEFVAKRCPSSKDAQDKYSECKKMVNKIAFEKAIAV 158 >gi|260885435|ref|ZP_05735039.2| putative TPR domain protein [Prevotella tannerae ATCC 51259] gi|260852363|gb|EEX72232.1| putative TPR domain protein [Prevotella tannerae ATCC 51259] Length = 1257 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 74/206 (35%), Gaps = 33/206 (16%) Query: 85 RDFPFAGVARKSL-LMSAFVQYSAG--------KYQQAASLGEEYITQYPESKNVDYVYY 135 + PF A+++ L+ Y+AG + AA E + YP+ + YY Sbjct: 586 KQLPFTEEAKEASNLILQNALYNAGVIEKDDLTDFPLAARTLERLVRHYPKFDRLQDAYY 645 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP---------YVKGARFYVTVGR 186 + + Y + + + QY +VE + +S Y+ A+F V Sbjct: 646 QLYLLYMRWQKPL--------EAEQYKRLLVEHFPDSAISKRLQDPNYLHDAQFAVQF-- 695 Query: 187 NQLAAKEVEIGRYY-LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 + Y ++G++ F+ Y D + ++ + + Sbjct: 696 ----EDSLYAATYNAYRKGDFATVGANFERSTQKYPDGANRDKFLFVQALTRLNRGEYKS 751 Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271 A + +S + ++YP+ E +VK Sbjct: 752 AEDALSTLVKQYPKSELQPMAEQIVK 777 >gi|242280445|ref|YP_002992574.1| hypothetical protein Desal_2983 [Desulfovibrio salexigens DSM 2638] gi|242123339|gb|ACS81035.1| Tetratricopeptide domain protein [Desulfovibrio salexigens DSM 2638] Length = 1117 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 19/109 (17%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Y + + +Y N P + G YYL EY A +FQ + Sbjct: 563 EAKAYFNLLKSQYPNDPNIPYIS--------------YYWGEYYLGMKEYEKAADQFQYL 608 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 + Y D++ +A L ++ AL ++A +++ Y W R+ Sbjct: 609 VQMYPDSKIVRDAALGLAKSLDALGYDEQAFQII-----DYIDKRWPRF 652 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 62/178 (34%), Gaps = 32/178 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 G +A + +QYP N+ Y+ Y G Y M + + + Sbjct: 557 KVGNMPEAKAYFNLLKSQYPNDPNIPYISYYWGEYYLGM--------KEYEKAADQFQYL 608 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKE--VEIGRYYLKR--GEYV--------AAI--P 211 V+ Y +S V+ A + + L E +I Y KR Y+ +A Sbjct: 609 VQMYPDSKIVRDAALGLAKSLDALGYDEQAFQIIDYIDKRWPRFYIEDLNFLLMSANTQN 668 Query: 212 RF---QLVLANY-------SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + NY +A A+ +AR+ + Y+ A+E+ + +P Sbjct: 669 RLGKIEQARENYWAYYNLAPEAPEADIVLARIGDIYLKTGQKTAAKEIYEKAAKDFPD 726 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 62/176 (35%), Gaps = 23/176 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +L + + KA + F + +P + + R + L A + G +QA + + Y Sbjct: 586 YYWGEYYLGMKEYEKAADQFQYLVQMYPDSKIVRDAALGLAKSLDALGYDEQAFQIID-Y 644 Query: 121 I-TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I ++P +Y+ +++ M + + + +P Sbjct: 645 IDKRWPR-------FYIEDLNFLLMSANTQNRLGKIEQARENYWAYYNLAPEAPEADIVL 697 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 IG YLK G+ AA ++ ++ D E +M RL E Sbjct: 698 AR--------------IGDIYLKTGQKTAAKEIYEKAAKDFPDKEGGLVSMMRLAE 739 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 19/50 (38%) Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 + + FP + +A + L Y KY + ++ +YP S Sbjct: 765 KIYTHIIEKFPDSPLAPLAQLKLGMWYYWNKKYGDCLGAVQGFLDKYPRS 814 >gi|295132712|ref|YP_003583388.1| tetratricopeptide repeat protein [Zunongwangia profunda SM-A87] gi|294980727|gb|ADF51192.1| tetratricopeptide repeat protein [Zunongwangia profunda SM-A87] Length = 1007 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 87/229 (37%), Gaps = 46/229 (20%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +YE ++ N S+A +++ R+ P + + K++L + Y++ + ++A S Sbjct: 611 DDALYELGNTYVATNNTSQAISTYDRLIREVPGSALVPKAMLRQGLIYYNSNQGEKALSK 670 Query: 117 GEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPYDQR----- 153 ++ + YP + +Y ++ + + + + D D Sbjct: 671 FKKVVNDYPNTPEAMEAVSTARNVYVDLGRTDEYAGWVKNIDFVE-VSDADLDNTTYEAA 729 Query: 154 -------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 T + ++ + N + A FY+ + + KE + Y Sbjct: 730 ENQYLANNTSQAKSNFEKYLKSFPNGIHAINANFYLAQLQYRDGDKEGSVPHY------- 782 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + V+A + E E+A+ARL + Y+ + EA ++ +++ Sbjct: 783 -------KYVIAK-PNNEFTEQALARLSQIYLEKSQYQEALPLLQRLEQ 823 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 32/102 (31%), Gaps = 8/102 (7%) Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 E + + +P + +L + QA S + I + P S V Sbjct: 594 IEDLSGFNSKYPRSAFRDDALYELGNTYVATNNTSQAISTYDRLIREVPGSALVPKAMLR 653 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 G+ Y + + L ++V Y N+P A Sbjct: 654 QGLIYYNSNQG--------EKALSKFKKVVNDYPNTPEAMEA 687 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 25/187 (13%), Positives = 52/187 (27%), Gaps = 33/187 (17%) Query: 64 AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + + + +A Y + R + + + Y G Y A S + Sbjct: 251 GESYFNLKQYDQAIPYLKEYQGVRRKWNNTDYYQ-----LGYAYYKQGDYANAISEFNKI 305 Query: 121 ITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I + YY + SY + + + L E ++ + A Sbjct: 306 ID---GKNAIAQNAYYHLAQSYLESGQK--------QQALNAFKNASEMDFDAKIKEDAM 354 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 E+ Y + L Y ++ + EA L+ +++ Sbjct: 355 LNYAKL-----GYEIG--------NSYESPSKVLITFLETYPNSPNKAEAEELLINSFIT 401 Query: 240 LALMDEA 246 +EA Sbjct: 402 SGNFEEA 408 Score = 42.8 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 28/213 (13%), Positives = 51/213 (23%), Gaps = 81/213 (38%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESK------------------------------ 128 + + +Y +A + Y + Sbjct: 506 NIGYAYFKKNEYDRAIEYFKRYAE-NSQHDAAKRNDAYLRLGDSYFVNSQYWPAMESYNA 564 Query: 129 -------NVDYVYYLVGMSY-----------------AQMIRDVPYDQ------------ 152 N DY + +SY ++ R D Sbjct: 565 AIANGVGNADYAAFQKAISYGFVDRNERKIEDLSGFNSKYPRSAFRDDALYELGNTYVAT 624 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 T + R++ S V A + Y + A+ + Sbjct: 625 NNTSQAISTYDRLIREVPGSALVPKAMLRQGLI--------------YYNSNQGEKALSK 670 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 F+ V+ +Y + A EA++ YV L DE Sbjct: 671 FKKVVNDYPNTPEAMEAVSTARNVYVDLGRTDE 703 Score = 35.5 bits (81), Expect = 7.9, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 76/245 (31%), Gaps = 62/245 (25%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQC--SRDF-----------------------------PF 89 Y + + ++ +A +YF++ + P Sbjct: 178 YYIGYMAYESDDYDQANQYFDEVKGDERYGKELSYYQADMNFKLGNFEKAIQLGKEQLPK 237 Query: 90 AGVARKSLLMSA--FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 + V KS L ++ +Y QA +EY + N DY Y +G +Y + Sbjct: 238 SNVVEKSQLNKIIGESYFNLKQYDQAIPYLKEYQGVRRKWNNTDY--YQLGYAYYK---- 291 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-VEIGRYYLKRGEY 206 Q + + + G+N +A + + YL+ G+ Sbjct: 292 ----QGDYANAISEFN-----------------KIIDGKNAIAQNAYYHLAQSYLESGQK 330 Query: 207 VAAIPRFQLVLANYSDAEHAEEA-MARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 A+ F+ DA+ E+A + Y + +V+ E YP Sbjct: 331 QQALNAFKNASEMDFDAKIKEDAMLNYAKLGYEIGNSYESPSKVLITFLETYPNSPNKAE 390 Query: 266 VETLV 270 E L+ Sbjct: 391 AEELL 395 >gi|255262111|ref|ZP_05341453.1| tetratricopeptide TPR_2 repeat protein [Thalassiobium sp. R2A62] gi|255104446|gb|EET47120.1| tetratricopeptide TPR_2 repeat protein [Thalassiobium sp. R2A62] Length = 273 Score = 54.7 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 54/164 (32%), Gaps = 10/164 (6%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 +L+ S+ G ++ D ++ +E+A L +F A + F Sbjct: 116 SLSDTSSLGGVDAQGTAPVATPIPSTDGPALAIGEQADFERAQWALASGDFRSAADQFAA 175 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGK-YQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + +P + +S L G+ A + E + + P + +G + Sbjct: 176 FVQTYPGGPLTAQSHLKRGEALEQLGETTDAARAFLEAF-SANPSGDVAPRALFKLGANL 234 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + + V ++ + R+ ++P V A + Sbjct: 235 GALGQTVD--------ACTTLAEVGVRFPSAPAVHEANAAMRKL 270 >gi|119896706|ref|YP_931919.1| hypothetical protein azo0415 [Azoarcus sp. BH72] gi|119669119|emb|CAL93032.1| conserved hypothetical secreted protein [Azoarcus sp. BH72] Length = 239 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 8/122 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A+ LK A F P A + + A + A + Sbjct: 123 YEAALNLLKGGKHRDALTAFEAFLARHPAGSFAPSAHFWAGNAALQAKEVASATTHFNAV 182 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + ++P ++G++ +Q K + + +VERY +S + A+ Sbjct: 183 LGKWPNDSVAPDA--MLGLANSQQA------MGDAKTAQRTLQSLVERYPSSNAAQAAKQ 234 Query: 181 YV 182 + Sbjct: 235 RL 236 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 37/106 (34%), Gaps = 14/106 (13%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + L + R+ + A + G L AKEV +A F Sbjct: 136 RDALTAFEAFLARHPAGSFAPSA--HFWAGNAALQAKEVA------------SATTHFNA 181 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 VL + + A +AM L + A+ A+ + + ERYP Sbjct: 182 VLGKWPNDSVAPDAMLGLANSQQAMGDAKTAQRTLQSLVERYPSSN 227 >gi|218533184|ref|YP_002424000.1| tol-pal system protein YbgF [Methylobacterium chloromethanicum CM4] gi|218525487|gb|ACK86072.1| tol-pal system protein YbgF [Methylobacterium chloromethanicum CM4] Length = 341 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 8/88 (9%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 ++ +A+ +Y+QA ++I +P + V Y +G SY Q R Sbjct: 216 QADFEAAYALIRERQYEQAEMSLRQFIQSHPRDRLVPKATYWLGESYLQRSRS------- 268 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYV 182 + + ++ Y NSP A + Sbjct: 269 -REAAEQFLKVSTDYANSPVAPEAMLKL 295 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 44/107 (41%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R + + + ++ + V A +++ G YL+R A + Sbjct: 229 RQYEQAEMSLRQFIQSHPRDRLVPKATYWL--------------GESYLQRSRSREAAEQ 274 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F V +Y+++ A EAM +L + AL +A ++ ++ ++P Sbjct: 275 FLKVSTDYANSPVAPEAMLKLGTSLHALGAKAQACATLAEVERKFPS 321 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 31/75 (41%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 D + Y +L+ +A E F + S D+ + VA +++L ++ G Sbjct: 246 PRDRLVPKATYWLGESYLQRSRSREAAEQFLKVSTDYANSPVAPEAMLKLGTSLHALGAK 305 Query: 111 QQAASLGEEYITQYP 125 QA + E ++P Sbjct: 306 AQACATLAEVERKFP 320 >gi|320106747|ref|YP_004182337.1| Lytic transglycosylase [Terriglobus saanensis SP1PR4] gi|319925268|gb|ADV82343.1| Lytic transglycosylase catalytic [Terriglobus saanensis SP1PR4] Length = 793 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 52/135 (38%), Gaps = 7/135 (5%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + +Y + L + + S A +++Q +FP + A + +A++ Y +Y Sbjct: 403 PHSRWTEEALYSGGNMHLLQHDASNAIWHYSQLYTNFPNSVYAPSAHWRTAWMNYRLRRY 462 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +AA L EE I +YP+S + R ++ + + + E Y Sbjct: 463 PEAARLMEEQIARYPQSTEASAALFWRA-------RLYEDPEKNFSQAVNFYQVLSEVYR 515 Query: 171 NSPYVKGARFYVTVG 185 N Y AR + Sbjct: 516 NYYYGVMARVRLRAL 530 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 39/148 (26%), Gaps = 8/148 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 AVC L L D ++Y A + E++ FP + Sbjct: 346 AVCDLKLKHLSRRDVERLPDTNDDSAALKLYLTAEISRNEKDIQAQRNAMQAMIERFPHS 405 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 ++L + A + T +P S ++ ++ R Sbjct: 406 RWTEEALYSGGNMHLLQHDASNAIWHYSQLYTNFPNSVYAPSAHWRTAWMNYRLRRYP-- 463 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGA 178 + M + RY S A Sbjct: 464 ------EAARLMEEQIARYPQSTEASAA 485 >gi|320354280|ref|YP_004195619.1| tol-pal system protein YbgF [Desulfobulbus propionicus DSM 2032] gi|320122782|gb|ADW18328.1| tol-pal system protein YbgF [Desulfobulbus propionicus DSM 2032] Length = 377 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 45/125 (36%), Gaps = 8/125 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + + + K +N+ +AY+ F Q P A KSL Y+ G+Y A ++ Sbjct: 261 FSQGMNQYKGKNYKEAYKSFEQSLSTNPNGSQAAKSLYYMGESLYNQGEYDLAILDYQKV 320 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I+ + + GMS+ ++ + +++ + S A+ Sbjct: 321 ISNHGKDALAPAALLKQGMSFEKLTDH--------ETAKIIYKKLISDHGGSAEASQAKE 372 Query: 181 YVTVG 185 + Sbjct: 373 RLGKL 377 >gi|254564207|ref|YP_003071302.1| hypothetical protein METDI5900 [Methylobacterium extorquens DM4] gi|254271485|emb|CAX27500.1| conserved hypothetical protein; putative exported protein [Methylobacterium extorquens DM4] Length = 341 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 8/88 (9%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 ++ +A+ +Y+QA ++I +P + V Y +G SY Q R Sbjct: 216 QADFEAAYALIRERQYEQAEMSLRQFIQSHPRDRLVPKATYWLGESYLQRSRS------- 268 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYV 182 + + ++ Y NSP A + Sbjct: 269 -REAAEQFLKVSTDYANSPVAPEAMLKL 295 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 44/107 (41%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R + + + ++ + V A +++ G YL+R A + Sbjct: 229 RQYEQAEMSLRQFIQSHPRDRLVPKATYWL--------------GESYLQRSRSREAAEQ 274 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F V +Y+++ A EAM +L + AL +A ++ ++ ++P Sbjct: 275 FLKVSTDYANSPVAPEAMLKLGTSLHALGAKAQACATLAEVERKFPS 321 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 31/75 (41%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 D + Y +L+ +A E F + S D+ + VA +++L ++ G Sbjct: 246 PRDRLVPKATYWLGESYLQRSRSREAAEQFLKVSTDYANSPVAPEAMLKLGTSLHALGAK 305 Query: 111 QQAASLGEEYITQYP 125 QA + E ++P Sbjct: 306 AQACATLAEVERKFP 320 >gi|94263068|ref|ZP_01286887.1| N-acetylmuramoyl-L-alanine amidase [delta proteobacterium MLMS-1] gi|93456611|gb|EAT06719.1| N-acetylmuramoyl-L-alanine amidase [delta proteobacterium MLMS-1] Length = 569 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 53/147 (36%), Gaps = 16/147 (10%) Query: 49 DSVTDVRYQREVYEKAVLFLKE--QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 D E Y++ +L ++ +N+ +A + + R+ P +A SL + + + Sbjct: 28 DPAEQFERISEYYQQQLLAGEQPRENWLRASQALQRLQRENPEHAIAPLSLYLLGNLHHR 87 Query: 107 AG-------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 A + E+ YP + D + + + +D+ + Sbjct: 88 LHRQEQNPLDLAAAITFFEDMQATYPRHRLADDALFYLANIF-------RHDRDEPERAG 140 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGR 186 + ++RI+ Y + AR + R Sbjct: 141 RTLARIIALYPDGELAAEARRQLPALR 167 Score = 38.6 bits (89), Expect = 0.98, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 42/125 (33%), Gaps = 14/125 (11%) Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE---VEIG 197 Y Q + + Q + R+ + + + ++L +E +++ Sbjct: 40 YQQQLLAGEQPRENWLRASQALQRLQRENPEHAIAPLSLYLLGNLHHRLHRQEQNPLDLA 99 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL-ALMDEAREVVSLIQER 256 AAI F+ + A Y A++A+ L + + A ++ I Sbjct: 100 ----------AAITFFEDMQATYPRHRLADDALFYLANIFRHDRDEPERAGRTLARIIAL 149 Query: 257 YPQGY 261 YP G Sbjct: 150 YPDGE 154 >gi|161833774|ref|YP_001597970.1| hypothetical protein SMGWSS_173 [Candidatus Sulcia muelleri GWSS] gi|152206264|gb|ABS30574.1| hypothetical protein SMGWSS_173 [Candidatus Sulcia muelleri GWSS] Length = 325 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 5/124 (4%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQ-YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A + KY A + + + +N+ + +GM Y D + Q+ Sbjct: 87 IALCYFYLKKYDLAINFFKILLKTDNSAEENI----FNLGMCYYLQSNDYFFFQKNRMKY 142 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++ + + Y NS Y+ + L K+ IG YY +Y ++ F+ ++ Sbjct: 143 IKIFLFLRKNYPNSRYLPRIDKILYNAFLTLKKKKESIGMYYFNTKKYNSSRIVFKQIIN 202 Query: 219 NYSD 222 +Y D Sbjct: 203 DYQD 206 >gi|71667321|ref|XP_820611.1| serine/threonine protein phosphatase type 5 [Trypanosoma cruzi strain CL Brener] gi|70885962|gb|EAN98760.1| serine/threonine protein phosphatase type 5, putative [Trypanosoma cruzi] Length = 472 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 41/151 (27%), Gaps = 27/151 (17%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +T + K +E + A E + + L AF Sbjct: 1 MTAAEEADRLKNKGNEAFQEGKWHHAIELYTEALALH----KTPVILCNRAFAYLKTELA 56 Query: 111 QQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 A + +E + P Y YY ++ + + K L+ +V+ Sbjct: 57 GAALTDADEALRLDPG-----YVKAYYRKASAHLYLGKH--------KEALKDFKTVVQL 103 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 AR + KEV R+ Sbjct: 104 IPGDK---DARKKLDFC-----EKEVRRIRF 126 >gi|94266423|ref|ZP_01290118.1| N-acetylmuramoyl-L-alanine amidase [delta proteobacterium MLMS-1] gi|93452965|gb|EAT03464.1| N-acetylmuramoyl-L-alanine amidase [delta proteobacterium MLMS-1] Length = 569 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 53/147 (36%), Gaps = 16/147 (10%) Query: 49 DSVTDVRYQREVYEKAVLFLKE--QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 D E Y++ +L ++ +N+ +A + + R+ P +A SL + + + Sbjct: 28 DPAEQFERISEYYQQQLLAGEQPRENWLRASQALQRLQRENPEHAIAPLSLYLLGNLHHR 87 Query: 107 AG-------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 A + E+ YP + D + + + +D+ + Sbjct: 88 LHRQEQNPLDLAAAITFFEDMQATYPRHRLADDALFYLANIF-------RHDRDEPERAG 140 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGR 186 + ++RI+ Y + AR + R Sbjct: 141 RTLARIIALYPDGELAAEARRQLPALR 167 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 42/125 (33%), Gaps = 14/125 (11%) Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE---VEIG 197 Y Q + + Q + R+ + + + ++L +E +++ Sbjct: 40 YQQQLLAGEQPRENWLRASQALQRLQRENPEHAIAPLSLYLLGNLHHRLHRQEQNPLDLA 99 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL-ALMDEAREVVSLIQER 256 AAI F+ + A Y A++A+ L + + A ++ I Sbjct: 100 ----------AAITFFEDMQATYPRHRLADDALFYLANIFRHDRDEPERAGRTLARIIAL 149 Query: 257 YPQGY 261 YP G Sbjct: 150 YPDGE 154 >gi|205355824|ref|ZP_03222593.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni CG8421] gi|205346258|gb|EDZ32892.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni CG8421] Length = 215 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 69/179 (38%), Gaps = 18/179 (10%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L +F S+ F ++ +Y S ++ Y++ + L++++ KA +++N Sbjct: 7 LLVFLSV---FFSACSTKNDEGLYNLSASEW------YKQIIKDLQDKDLEKADDHYNGM 57 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + + + L++ A +Y+ A +EY ++ S+N DY+ YL + Sbjct: 58 ASEHVADPLLETILIILAQAHMDEEEYKLAEFYLDEYNKKFGNSRNADYIRYLKIKAKFD 117 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 +Q + + ++ Y + Y + +T + +YL Sbjct: 118 AFAVPNRNQALMLESQKEIDTFLKDYPYTEYEPLVQTMLTK---------FNLAVFYLN 167 >gi|297182618|gb|ADI18777.1| DNA uptake lipoprotein [uncultured gamma proteobacterium HF4000_36I10] Length = 104 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 22/39 (56%) Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +A+A +V+AY+ L + D A +++++ +P+ Sbjct: 2 PQTSAVPDALAVMVQAYLLLGMDDLADRSLTVLRSNFPK 40 >gi|217976964|ref|YP_002361111.1| tol-pal system protein YbgF [Methylocella silvestris BL2] gi|217502340|gb|ACK49749.1| tol-pal system protein YbgF [Methylocella silvestris BL2] Length = 386 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 43/108 (39%), Gaps = 14/108 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q+ + + + +++ S Y A +Y+ G + +R A Sbjct: 275 QKQYEAAEKSFAAFIQKNPKSRYSADATYYL--------------GESFFQRSRPREAAE 320 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 ++ + Y+ + A EAM RL ++ +L ++A + I +YP Sbjct: 321 QYLKISTQYATSARAPEAMLRLGQSLNSLGAKEQACATFAEIGRKYPN 368 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 43/133 (32%), Gaps = 22/133 (16%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 A+ +Y+ A +I + P+S+ Y +G S+ Q R + Sbjct: 265 EFDVAYGYLRQKQYEAAEKSFAAFIQKNPKSRYSADATYYLGESFFQRSR--------PR 316 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + +I +Y S A + N L AKE + A I R Sbjct: 317 EAAEQYLKISTQYATSARAPEAMLRLGQSLNSLGAKEQACATF--------AEIGR---- 364 Query: 217 LANYSDAEHAEEA 229 Y +A +A Sbjct: 365 --KYPNAPGNVKA 375 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 47/132 (35%), Gaps = 8/132 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 ++ + + +E ++ A +L+++ + A + F + P + + + Sbjct: 247 ATPNALAPGAAPINPVKEEFDVAYGYLRQKQYEAAEKSFAAFIQKNPKSRYSADATYYLG 306 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + + ++AA + TQY S +G S + A + Sbjct: 307 ESFFQRSRPREAAEQYLKISTQYATSARAPEAMLRLGQSLNSL--------GAKEQACAT 358 Query: 162 MSRIVERYTNSP 173 + I +Y N+P Sbjct: 359 FAEIGRKYPNAP 370 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 2/79 (2%) Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E ++ YL++ +Y AA F + + ++ +A L E++ + EA E Sbjct: 265 EFDVAYGYLRQKQYEAAEKSFAAFIQKNPKSRYSADATYYLGESFFQRSRPREAAEQYLK 324 Query: 253 IQERYPQGYWARYVETLVK 271 I +Y AR E +++ Sbjct: 325 ISTQYATS--ARAPEAMLR 341 >gi|240141699|ref|YP_002966179.1| hypothetical protein MexAM1_META1p5301 [Methylobacterium extorquens AM1] gi|240011676|gb|ACS42902.1| conserved hypothetical protein; putative exported protein [Methylobacterium extorquens AM1] Length = 341 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 8/88 (9%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 ++ +A+ +Y+QA ++I +P + V Y +G SY Q R Sbjct: 216 QADFEAAYALIRERQYEQAEMSLRQFIQSHPRDRLVPKATYWLGESYLQRSRS------- 268 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYV 182 + + ++ Y NSP A + Sbjct: 269 -REAAEQFLKVSTDYANSPVAPEAMLKL 295 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 44/107 (41%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R + + + ++ + V A +++ G YL+R A + Sbjct: 229 RQYEQAEMSLRQFIQSHPRDRLVPKATYWL--------------GESYLQRSRSREAAEQ 274 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F V +Y+++ A EAM +L + AL +A ++ ++ ++P Sbjct: 275 FLKVSTDYANSPVAPEAMLKLGTSLHALGAKAQACATLAEVERKFPS 321 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 13/108 (12%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 D + Y +L+ +A E F + S D+ + VA +++L ++ G Sbjct: 246 PRDRLVPKATYWLGESYLQRSRSREAAEQFLKVSTDYANSPVAPEAMLKLGTSLHALGAK 305 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 QA + E ++P + A + + V +Q+ + Sbjct: 306 AQACATLAEVERKFPS-------------ANAIVRQGVEREQKRARCA 340 >gi|87311645|ref|ZP_01093762.1| Alpha-2-macroglobulin-like [Blastopirellula marina DSM 3645] gi|87285648|gb|EAQ77565.1| Alpha-2-macroglobulin-like [Blastopirellula marina DSM 3645] Length = 2753 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 34/273 (12%), Positives = 75/273 (27%), Gaps = 85/273 (31%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQY-----SAGKYQQA 113 YE +L+ N +A + + + + + + + Sbjct: 244 YELGEAYLQSGNRVEARRSWEDLLSLHGTAKSKLIPLAAFRLSETYGIPNPGNKDDLELG 303 Query: 114 ASLGEEYITQYPESKNVD-------------------------------------YV--Y 134 + ++++ YP+ + V Y Sbjct: 304 VAALKKFLATYPDHEKVASAHLRIVQSFLNQGRTEDALAAVDNFLQQANLEKSDEYASAQ 363 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-------------NSPYVK--GAR 179 YL G++ A+ Q+ + ++++ N+ Y K A Sbjct: 364 YLKGLALAR--------QKKFDDAIVAWRTYLQQHPTHGHWSEAQRQIINAEYAKGLDAL 415 Query: 180 FYVTVGRNQLAAKEVEI---------------GRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + A E + + +Y AAI ++ V++ Y E Sbjct: 416 EREDYDAARAAWGEFLVKYPIDERNRSIQNSFAEMLFAQKKYEAAIAAWRQVVSKYPQTE 475 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 A A R+ + +A L A +V + + Sbjct: 476 EASIAQYRVAQT-LAEKLSRLADAMVEYKKLNW 507 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 62/194 (31%), Gaps = 25/194 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA----ASL 116 Y K + + ++ Q ++ +P + RK+ AG Y+ A + Sbjct: 87 YLKGRAHFFAKQYKESIAVMTQLTKRYPDSAWTRKARFAIGVAYARAGDYRAAELAYQAE 146 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT--KLMLQYMSRIVERYTNSPY 174 E I+ + + Y + +A P D + + L + + E Sbjct: 147 AEYLISL-QRKEEIA-AIY---LEFADAFFAPPADGKHPDYQRALAFYQKAAEIGP---- 197 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 ++ + ++I R Y + AI +Q + D A L Sbjct: 198 LRETNTRIQ----------LQIARCYKQLNNPGQAIQLYQAFINANDDDVLLLPARYELG 247 Query: 235 EAYVALALMDEARE 248 EAY+ EAR Sbjct: 248 EAYLQSGNRVEARR 261 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 67/226 (29%), Gaps = 63/226 (27%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA-FVQYSAGKYQQA----ASLGEEYI 121 L++ N ++A YF +P + + LM + G+Y+++ + E Sbjct: 2211 SLEQGNSAEAVRYFEIVIEKYPELEI-PFAKLMKIGKAYHEIGEYERSYLVYRATVE--- 2266 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 ++V + DQ ++ M+ +++ PYV A + Sbjct: 2267 -----------ASFMV----ESQVAGFLQDQNEFLRSVEVMTALLQNSPPEPYVATADY- 2310 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAA---------IPRFQ------LVLANY----SD 222 LA + VAA I R +L N+ + Sbjct: 2311 ------ALAQQVFA--------KAPVAAQDPQLREKHINRVTLVRRSLGMLENFLTAHPE 2356 Query: 223 AEHAEEAMARLVEAYVALALMDEA-----REVVSLIQERYPQGYWA 263 A++A L + L +A + YW Sbjct: 2357 DPSADQAAFSLATGLIELDAYQQAISVCGDYTRRYDNSNFLSSYWY 2402 >gi|157415335|ref|YP_001482591.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 81116] gi|157386299|gb|ABV52614.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 81116] Length = 215 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 70/179 (39%), Gaps = 18/179 (10%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L +F SI F ++ +Y S ++ Y++ + L++++ KA +++N Sbjct: 7 LLVFLSI---FFSACSTKNDEGLYNLSASEW------YKQIIKDLQDKDLEKADDHYNGM 57 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + + + +L++ A +Y+ A +EY ++ S+N DY+ YL + Sbjct: 58 ASEHVADPLLETTLIILAQAHMDEEEYKLAEFYLDEYNKKFGNSRNADYIRYLKIKAKFD 117 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 +Q + + ++ Y + Y + +T + +YL Sbjct: 118 AFAVPNRNQALMLESQKEIDTFLKDYPYTEYEPLVQTMLTK---------FNLAVFYLN 167 >gi|88705613|ref|ZP_01103323.1| conserved hypothetical protein, secreted [Congregibacter litoralis KT71] gi|88700126|gb|EAQ97235.1| conserved hypothetical protein, secreted [Congregibacter litoralis KT71] Length = 304 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 43/126 (34%), Gaps = 12/126 (9%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 V + + + Y A ++ Q F +A FN +P A + Y Sbjct: 174 EVAEQPGEGDAYRAAYALVRGQEFDQAVSAFNAFLERYPAGRFAPNAHYWLGE-LYLVTD 232 Query: 110 YQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 + + ++ YP + + Y +G + D+ ++++R++ Sbjct: 233 PVDPEASRQAFMLLLNQYPTNAKIPDALYKLGRVHFMKGN---RDRSR-----EFLNRVI 284 Query: 167 ERYTNS 172 Y +S Sbjct: 285 REYPDS 290 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 46/131 (35%), Gaps = 21/131 (16%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 ++R +DQ + + +ERY + A +++ G YL Sbjct: 189 YALVRGQEFDQ-----AVSAFNAFLERYPAGRFAPNAHYWL--------------GELYL 229 Query: 202 KRG--EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + A+ F L+L Y +A+ +L + D +RE ++ + YP Sbjct: 230 VTDPVDPEASRQAFMLLLNQYPTNAKIPDALYKLGRVHFMKGNRDRSREFLNRVIREYPD 289 Query: 260 GYWARYVETLV 270 AR + Sbjct: 290 SSAARLAGDFL 300 >gi|332716441|ref|YP_004443907.1| hypothetical protein AGROH133_12011 [Agrobacterium sp. H13-3] gi|325063126|gb|ADY66816.1| hypothetical protein AGROH133_12011 [Agrobacterium sp. H13-3] Length = 330 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 50/143 (34%), Gaps = 14/143 (9%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 + SR + + + ++Y+ A + ++ A + F Q + +P Sbjct: 180 SGSLPGVTTGNGSRKTDPVNTAALTSEGDIYQAAYGHVLSGDYKLAEQGFQQYLQGYPKG 239 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE---SKNVDYVYYLVGMSYAQMIRD 147 A + QYS GK+ +A + ++ + S + +GMS A + Sbjct: 240 TKAADASFWLGEAQYSQGKFNEA---AKTFLNGHQTYGKSPKAPEMLMKLGMSLAALDN- 295 Query: 148 VPYDQRATKLMLQYMSRIVERYT 170 T+ + + +RY Sbjct: 296 -------TETACATLREVPKRYP 311 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 36/109 (33%), Gaps = 14/109 (12%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 KL Q + ++ Y A F++ + +G++ A Sbjct: 220 GDYKLAEQGFQQYLQGYPKGTKAADASFWLGEAQ--------------YSQGKFNEAAKT 265 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 F Y + A E + +L + AL + A + + +RYP Sbjct: 266 FLNGHQTYGKSPKAPEMLMKLGMSLAALDNTETACATLREVPKRYPSAS 314 >gi|218885876|ref|YP_002435197.1| tol-pal system protein YbgF [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756830|gb|ACL07729.1| tol-pal system protein YbgF [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 285 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 54/146 (36%), Gaps = 10/146 (6%) Query: 39 ERQSSRDVYLDSVTDVR--YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 + +SR V + + YE A+ L+ +A F+ D+P + + + Sbjct: 145 AKSASRTVQKPEPKPAKGVSDKAAYESALNLLQRGKTDEARVRFDGFLGDYPNSALVPNA 204 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L Y+ +Y A +E ++P+ + ++Y Q+ D + Sbjct: 205 LYWKGEALYAQRRYADAIVAFKEVTARFPKHHKAADSLLKIALAYKQLGDD-----ENVR 259 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYV 182 L+ + E + +SP K AR Sbjct: 260 FHLKALR---EDHPDSPAAKLARQRF 282 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 44/137 (32%), Gaps = 22/137 (16%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + K+ SA GK +A + ++ YP S V Y G + R Sbjct: 164 SDKAAYESALNLLQRGKTDEARVRFDGFLGDYPNSALVPNALYWKGEALYAQRRYAD--- 220 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + + R+ + + + QL E + R++LK Sbjct: 221 -----AIVAFKEVTARFPKHHKAADSLLKIALAYKQLGDDE-NV-RFHLK---------- 263 Query: 213 FQLVLANYSDAEHAEEA 229 + ++ D+ A+ A Sbjct: 264 --ALREDHPDSPAAKLA 278 Score = 43.2 bits (101), Expect = 0.045, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 14/110 (12%) Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 T + Y NS V A ++ Y +R Y AI F+ Sbjct: 181 TDEARVRFDGFLGDYPNSALVPNALYWKGEAL-------------YAQRR-YADAIVAFK 226 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 V A + A +++ ++ AY L + R + ++E +P A+ Sbjct: 227 EVTARFPKHHKAADSLLKIALAYKQLGDDENVRFHLKALREDHPDSPAAK 276 >gi|301020782|ref|ZP_07184848.1| tol-pal system protein YbgF [Escherichia coli MS 69-1] gi|300398507|gb|EFJ82045.1| tol-pal system protein YbgF [Escherichia coli MS 69-1] Length = 225 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F +++P Sbjct: 78 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 137 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 138 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 189 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 190 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 225 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ Sbjct: 104 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 152 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 153 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 209 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 210 PGTDGAKQAQK 220 Score = 47.0 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 122 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 173 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 174 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 219 Query: 231 ARL 233 RL Sbjct: 220 KRL 222 >gi|301027071|ref|ZP_07190445.1| tol-pal system protein YbgF [Escherichia coli MS 196-1] gi|299879436|gb|EFI87647.1| tol-pal system protein YbgF [Escherichia coli MS 196-1] Length = 225 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%) Query: 61 YEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ +++++ A F +++P + + + Y+ GK AA Sbjct: 108 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 167 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP+S + VG+ + D+ T +++ +Y + K A+ Sbjct: 168 VVKNYPKSPKAADAMFKVGV--------IMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQ 219 Query: 180 FYVTVG 185 + Sbjct: 220 KRLNAM 225 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ Sbjct: 104 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 152 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 153 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 209 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 210 PGTDGAKQAQK 220 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 122 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 173 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 174 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 219 Query: 231 ARL 233 RL Sbjct: 220 KRL 222 >gi|294669631|ref|ZP_06734698.1| hypothetical protein NEIELOOT_01532 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308544|gb|EFE49787.1| hypothetical protein NEIELOOT_01532 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 225 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 10/112 (8%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E A + NF+ A + + R+S+ + G + ++G YI Sbjct: 110 ESARKQYRSGNFAAAAKLLQASESGGSGSEHDRQSMYLLMQSHQRLGNCESVINIGNRYI 169 Query: 122 TQYPESKNVDYVYYLVGMS-YAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 +++ S + +G + RDV D +++ Y +S Sbjct: 170 SRFRNSPEAADAMFSIGQCQWNMQQRDVARD---------TWRKLMLIYPDS 212 >gi|300114393|ref|YP_003760968.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus watsonii C-113] gi|299540330|gb|ADJ28647.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus watsonii C-113] Length = 931 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 65/173 (37%), Gaps = 37/173 (21%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARKSLLMSAFVQYSAGKYQQA 113 ++ +A++ + +++ A S+ P A + LL + +Y A Sbjct: 238 ASDLLNRALVRIYLKDYEGAASDLETLSKRAPNHPGVTYA-QGLL-----YFQQQQYADA 291 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + ++ + Q P K + V+Y G+++ Q Q + + + + + + S Sbjct: 292 LTDFQKTLNQNP--KYMPAVFY-AGIAHYQ--------QGQMEQAERLLQQFLAYFPQSE 340 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 AAK + + R+ +G+Y A + +LA Y + H Sbjct: 341 ---------------AAAKVLAVVRF--HKGDYKGAESVLKPLLARYPNDTHI 376 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 78/231 (33%), Gaps = 46/231 (19%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + +L+ ++Q ++ A F + P ++ + Y G+ +QA L +++ Sbjct: 276 YAQGLLYFQQQQYADALTDFQKTLNQNP--KYMP-AVFYAGIAHYQQGQMEQAERLLQQF 332 Query: 121 ITQYPESKNVDYVY----YLVG------------MSYA-------QMIRDVPYDQRATKL 157 + +P+S+ V + G ++ ++ D+ Q + Sbjct: 333 LAYFPQSEAAAKVLAVVRFHKGDYKGAESVLKPLLARYPNDTHILTLMGDIALRQGKARE 392 Query: 158 MLQYMSRIVERYTNS-----------PYVKGARFYVTVGRN------QLAAKEVEIGRYY 200 Y ++ + S + + + + Q+ ++ + + Sbjct: 393 GTGYFQQVTIQEPESAAAYMKLGLGLEFSGEHQQGIQMLEKALKLEPQMPQADLLVILSH 452 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 L+ + AI Q + Y D+ E + + AY+ +AR Sbjct: 453 LQARNFDKAIEAAQQMHRKYPDSP---EPLTLMGGAYLGKGEKAKARSAFR 500 Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 56/147 (38%), Gaps = 16/147 (10%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 F + G + ++ + + T + + +A L L++ S+A E + + D Sbjct: 684 FVMARLLMQEGKQEEAKKQLRELKRTHLNQPEVIDLEAQLALQQNQPSEAIEIYQKAHND 743 Query: 87 FPFA-GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 FP + L A +Q+ GK + + + E+++ +PE V +V + ++ Sbjct: 744 FPDSNRWP----LKLAQIQWQTGKQKDSLATLEKWLKSHPEDFQVQFV----AANNYLLL 795 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNS 172 +++ E+ + Sbjct: 796 GQNNR-------AESAFAKLHEQAPEN 815 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 76/227 (33%), Gaps = 50/227 (22%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ A L +++ N KA + Q + P LL A ++ G +A Sbjct: 509 APNAIHNLANLEIQKGNLEKAISLYQQTLKYNPNHLHT---LLRLAALEQQRGNIAKAKI 565 Query: 116 LGEEYITQYPE--SKNV---DYVYYLV------GMSYAQMIRDVPYDQRA---------- 154 L E+ + +P+ + + DY YL ++ I+D D A Sbjct: 566 LLEQAMQAHPQALNPRLLLGDY--YLRDGQPQKALAITSDIQDTFPDNPALLALAGKIQL 623 Query: 155 ----TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 ++ L+Y +++V +S A E+ R Y + ++ Sbjct: 624 ALGKSRNALRYFNKLVSLQPDS---------------ATAHYEL--ARAYYETKQFTKTQ 666 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + L + A + + +EA++ + ++ + Sbjct: 667 TELEKTLVLDPN---HAGARFVMARLLMQEGKQEEAKKQLRELKRTH 710 >gi|297569847|ref|YP_003691191.1| N-acetylmuramoyl-L-alanine amidase [Desulfurivibrio alkaliphilus AHT2] gi|296925762|gb|ADH86572.1| N-acetylmuramoyl-L-alanine amidase [Desulfurivibrio alkaliphilus AHT2] Length = 581 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 14/124 (11%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYI 121 K +N+ +A + R V KSL + + + +A + +E Sbjct: 49 KRENWQRAARALQELHRQQARQEVGAKSLYLLGNLYHQLYRRSGIPLDLAEAITSLQEVQ 108 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 YP D + V + Y+Q+ + Q + R+++ Y GAR Sbjct: 109 GLYPNHPLADDALFYVAHIFL-------YEQQDWQRAEQVLKRLLDLYPAGDVAPGAREM 161 Query: 182 VTVG 185 + Sbjct: 162 LATI 165 >gi|89068038|ref|ZP_01155455.1| hypothetical protein OG2516_07652 [Oceanicola granulosus HTCC2516] gi|89046277|gb|EAR52334.1| hypothetical protein OG2516_07652 [Oceanicola granulosus HTCC2516] Length = 274 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 42/123 (34%), Gaps = 10/123 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-QQAAS 115 ++ +E+A L +F A + F + +P ++ ++ + + G+ A + Sbjct: 151 EQADFERAQEALAAGDFRGAVDLFATHTETYPGGPLSAQAHFLRGEAHEALGEPQAAARA 210 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 E + + P + + +G + + +S + R+ S Sbjct: 211 YLEAFSGE-PRGEIAPDALFRLGGTLGVL--------GQVDEACVTLSEVTNRFPESDAA 261 Query: 176 KGA 178 A Sbjct: 262 LEA 264 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 37/120 (30%), Gaps = 19/120 (15%) Query: 147 DVPYDQRA-----TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 D Q A + + + E Y P A F L Sbjct: 154 DFERAQEALAAGDFRGAVDLFATHTETYPGGPLSAQAHFLRGEAHEAL------------ 201 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 GE AA + + E A +A+ RL L +DEA +S + R+P+ Sbjct: 202 --GEPQAAARAYLEAFSGEPRGEIAPDALFRLGGTLGVLGQVDEACVTLSEVTNRFPESD 259 >gi|288957827|ref|YP_003448168.1| hypothetical protein AZL_009860 [Azospirillum sp. B510] gi|288910135|dbj|BAI71624.1| hypothetical protein AZL_009860 [Azospirillum sp. B510] Length = 307 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 45/141 (31%), Gaps = 10/141 (7%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 T + YE+A L+ ++ +A + A + Y Sbjct: 173 PPSTAGLSPEKQYEQAFELLRNSDYDRAEKALQDFIAKNKSHAYAGNAQYWLGESYYVRN 232 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 K+ +AA E +++Y + +GM+ QM R ++++ + Sbjct: 233 KFPEAAQAFGEVLSKYRTNPKAADSLLKLGMTLQQMNRKSD--------ACTAFNQLMSK 284 Query: 169 YTNSPYVKGARFYVTVGRNQL 189 + + + R ++ Sbjct: 285 FPEA--SASVKRRADTERKRI 303 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 29/96 (30%), Gaps = 8/96 (8%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 AF Y +A +++I + Y +G SY + Sbjct: 184 QYEQAFELLRNSDYDRAEKALQDFIAKNKSHAYAGNAQYWLGESYYVRNKFP-------- 235 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 Q ++ +Y +P + + + Q+ K Sbjct: 236 EAAQAFGEVLSKYRTNPKAADSLLKLGMTLQQMNRK 271 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 45/120 (37%), Gaps = 19/120 (15%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +++R+ YD+ + + + + + Y A++++ G Y Sbjct: 189 FELLRNSDYDR-----AEKALQDFIAKNKSHAYAGNAQYWL--------------GESYY 229 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 R ++ A F VL+ Y A +++ +L + +A + + ++P+ Sbjct: 230 VRNKFPEAAQAFGEVLSKYRTNPKAADSLLKLGMTLQQMNRKSDACTAFNQLMSKFPEAS 289 >gi|307153280|ref|YP_003888664.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 7822] gi|306983508|gb|ADN15389.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822] Length = 1048 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 86/253 (33%), Gaps = 45/253 (17%) Query: 18 QLYKFALTIFFSIAVCFLVGWER-------QSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70 + F+L + S+ F + S + L +T + + E+ + L+ Sbjct: 2 KSKTFSLRVLLSLLTTFNLSCATLISDPQVSLSENGELAQMTQENKAKTLLEQGMQQLEA 61 Query: 71 QNFSKAYEYFNQC--------SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 ++ A + F + R ++L + G Y +A Sbjct: 62 GDYQAAIQSFQEALILLRQQNDRQGEG-----QALKNLGNAYFWLGDYAKAL-------- 108 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-SPYVKGARFY 181 DY + A+ I D + RA + + + E Y + Y + + Sbjct: 109 --------DYGQ--KALDIARDIGDQDLEARALLNLGNLANELQE-YPKANDYYQQSLNL 157 Query: 182 VTVGRNQ-LAAKEV-EIGRYYLKRGEYVAAIPRFQL---VLANYSDAEHAEEAMARLVEA 236 +N+ L AK + +G+ +G Y AI Q + N SD + A+ RL A Sbjct: 158 AIKSKNRELQAKVLGSMGQSNYSQGHYDEAIKYLQESLKIAENLSDNKLQVNALIRLGRA 217 Query: 237 YVALALMDEAREV 249 Y + +A + Sbjct: 218 YQEKKELTKAIDY 230 Score = 38.9 bits (90), Expect = 0.71, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 68/218 (31%), Gaps = 30/218 (13%) Query: 64 AVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + ++ +A +Y + + + + +L+ + +A ++ Sbjct: 175 GQSNYSQGHYDEAIKYLQESLKIAENLSDNKLQVNALIRLGRAYQEKKELTKAIDYYQQS 234 Query: 121 ITQ-----YPESKNV-----DYVY-----YLVGMSYAQMIRDVPY---DQRATKLMLQYM 162 + P + + Y Y + Y++ + D + L + Sbjct: 235 LKIVRELNNPLQERIVLMALGLAYNESRDYDQAIEYSKQGVTIGREIKDPQGESESLYVL 294 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQL--AAKEVEIGRY----YLKRGEYVAAIPRFQLV 216 + V V QL +EVEI + Y GEY+ I + Sbjct: 295 GLAYNGKGDYQKVVETYEQALVIVRQLNNPQREVEILNFLGVAYGALGEYLQQINYLKQA 354 Query: 217 L---ANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 L +S++E +A+ L +A+ L A + Sbjct: 355 LTLAKTFSESELEIKALWLLGQAHFNLGDYAAAIKYQK 392 >gi|86150450|ref|ZP_01068675.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|86150832|ref|ZP_01069048.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|86152697|ref|ZP_01070902.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|88596825|ref|ZP_01100062.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|121613300|ref|YP_001000752.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 81-176] gi|167005672|ref|ZP_02271430.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|218562688|ref|YP_002344467.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315124558|ref|YP_004066562.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85839045|gb|EAQ56309.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|85842002|gb|EAQ59248.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|85843582|gb|EAQ60792.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249179|gb|EAQ72140.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|88191666|gb|EAQ95638.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|112360394|emb|CAL35191.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926303|gb|ADC28655.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni IA3902] gi|315018280|gb|ADT66373.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315928025|gb|EFV07345.1| tRNA/guanine-N1 methyltransferase [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929222|gb|EFV08441.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 305] Length = 215 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 70/179 (39%), Gaps = 18/179 (10%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L +F S+ F ++ +Y S ++ Y++ + L++++ KA +++N Sbjct: 7 LLVFLSV---FFSACSTKNDEGLYNLSASEW------YKQIIKDLQDKDLEKADDHYNGM 57 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + + + +L++ A +Y+ A +EY ++ S+N DY+ YL + Sbjct: 58 ASEHVADPLLETTLIILAQAHMDEEEYKLAEFYLDEYNKKFGNSRNADYIRYLKIKAKFD 117 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 +Q + + ++ Y + Y + +T + +YL Sbjct: 118 AFAVPNRNQALMLESQKEIDTFLKDYPYTEYEPLVQTMLTK---------FNLAVFYLN 167 >gi|162457519|ref|YP_001619886.1| hypothetical protein sce9233 [Sorangium cellulosum 'So ce 56'] gi|161168101|emb|CAN99406.1| hypothetical protein predicted by Glimmer/Critica [Sorangium cellulosum 'So ce 56'] Length = 286 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 47/139 (33%), Gaps = 16/139 (11%) Query: 47 YLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + DSV R + + Y+ + ++ + +A F R A + L A Sbjct: 150 FSDSVDKSRSELSIKSYQTGLDHMRTGRWHEAAVAFEDAIRQKETASHTPSARLNLARAY 209 Query: 105 YSAGKYQQAASLGEEYITQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + + A L +T S + +D +L+ D +A Sbjct: 210 RRLNRQRDAIPLL---MTLSEASPDREVMDDATFLLAECL--------LDIQAWNDAKTT 258 Query: 162 MSRIVERYTNSPYVKGARF 180 + + R+ +S Y+ AR Sbjct: 259 LRSFIRRFPDSAYINDARL 277 >gi|170738631|ref|YP_001767286.1| tol-pal system protein YbgF [Methylobacterium sp. 4-46] gi|168192905|gb|ACA14852.1| tol-pal system protein YbgF [Methylobacterium sp. 4-46] Length = 313 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 8/99 (8%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 K+ +A+ +Y+QA ++I +P V Y +G +Y Q R Sbjct: 188 KADYEAAYAYVLQRQYEQAEMRLRQFIQSHPRDALVPDATYWLGETYLQRNR-------- 239 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 T+ + ++ Y S A + N L A+E Sbjct: 240 TREAAEQFLKVSTDYARSRKAPEAMLKLGASLNALGARE 278 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 46/108 (42%), Gaps = 14/108 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 QR + + + ++ + V A +++ G YL+R A Sbjct: 200 QRQYEQAEMRLRQFIQSHPRDALVPDATYWL--------------GETYLQRNRTREAAE 245 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +F V +Y+ + A EAM +L + AL ++A ++ ++ ++PQ Sbjct: 246 QFLKVSTDYARSRKAPEAMLKLGASLNALGAREQACATLAELERKFPQ 293 >gi|322435533|ref|YP_004217745.1| hypothetical protein AciX9_1919 [Acidobacterium sp. MP5ACTX9] gi|321163260|gb|ADW68965.1| hypothetical protein AciX9_1919 [Acidobacterium sp. MP5ACTX9] Length = 270 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 3/81 (3%) Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 AK++E+ YY G Y+A++ R + + + D EA L A + ++A Sbjct: 190 AKDLEVAHYYFTTGNYLASLNRAKDAVRLFPD---DPEAHYALALAAQNMKNQEQASAEF 246 Query: 251 SLIQERYPQGYWARYVETLVK 271 + P G A+ E +K Sbjct: 247 QTYLKLDPGGDHAKDAEKALK 267 Score = 38.9 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 9/83 (10%), Positives = 25/83 (30%), Gaps = 11/83 (13%) Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 L A ++ G Y + + ++ + +P+ Y ++ M + + Sbjct: 193 LEVAHYYFTTGNYLASLNRAKDAVRLFPDDPEAHYAL---ALAAQNM--------KNQEQ 241 Query: 158 MLQYMSRIVERYTNSPYVKGARF 180 ++ + K A Sbjct: 242 ASAEFQTYLKLDPGGDHAKDAEK 264 >gi|296120993|ref|YP_003628771.1| hypothetical protein Plim_0726 [Planctomyces limnophilus DSM 3776] gi|296013333|gb|ADG66572.1| hypothetical protein Plim_0726 [Planctomyces limnophilus DSM 3776] Length = 496 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 61/167 (36%), Gaps = 14/167 (8%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQY-SAGKYQQAASLGEEYITQ----YPESKNV 130 A + P +A + LM A + K+ +A + Y + YP S +V Sbjct: 235 AIAALRAIWLNDPAGPLADDA-LMLAASHFARRSKWAEA----DNYFSLLREQYPNSPHV 289 Query: 131 DYVYYLVGMSYAQMIR--DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 +L+G S+ +++ YD R + Q + Y + + Sbjct: 290 QKA-FLLG-SHVKLMSYEGAGYDGRRLEEARQLKETALRLYPEAEDRARLEKELAGIEEA 347 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 A+ E R+Y ++ A +++ Y ++ +A +A L E Sbjct: 348 EVARLWEQIRFYQRKRRDSAVGLYCHMLIDRYPNSSYAPQARQILNE 394 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 64/167 (38%), Gaps = 22/167 (13%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + R ++L+ + A F + +++A YF+ +P + +K+ Sbjct: 233 GNAIAALRAIWLNDPAGPLADDALMLAASHFARRSKWAEADNYFSLLREQYPNSPHVQKA 292 Query: 97 -------LLMSAF--VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS------- 140 LMS + Y + ++A L E + YPE++ D ++ Sbjct: 293 FLLGSHVKLMS-YEGAGYDGRRLEEARQLKETALRLYPEAE--DRARLEKELAGIEEAEV 349 Query: 141 --YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + IR +R + + L Y +++RY NS Y AR + Sbjct: 350 ARLWEQIRFYQRKRRDSAVGL-YCHMLIDRYPNSSYAPQARQILNEL 395 Score = 43.6 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 78/242 (32%), Gaps = 40/242 (16%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E + KA KE F++A F + ++ + + + +L M A + Y A + Sbjct: 93 SEEFAKAEELFKEGKFAEAESAFKKIAKKYKKSEIREDALFMQAESAFQRQHYADAYDIV 152 Query: 118 EEYITQYPESKNVDYV---YYLVGMSYAQ-----MIRDVPY-----------------DQ 152 + +YP S+ +D + + + + I ++ D+ Sbjct: 153 AVLLKEYPSSRYLDSISRRLFEIARIWLNDPKVAQIDEIQQTNLQNPGERLPPPSPVEDK 212 Query: 153 RATKLMLQYMSRIVERY-TNSPYVKGARFYVTVGRN---QLAAKE-VEIGRYYLKRGEYV 207 + + L + A + LA + ++ +R ++ Sbjct: 213 KQSAFALNLFDEKKPVFDPEGN--AIAALRAIWLNDPAGPLADDALMLAASHFARRSKWA 270 Query: 208 AAIPRFQLVLANYSDAEHAEEAM----ARLVEAYVALALMDEAREVVSLIQER----YPQ 259 A F L+ Y ++ H ++A + +Y E ++E YP+ Sbjct: 271 EADNYFSLLREQYPNSPHVQKAFLLGSHVKLMSYEGAGYDGRRLEEARQLKETALRLYPE 330 Query: 260 GY 261 Sbjct: 331 AE 332 >gi|302038735|ref|YP_003799057.1| hypothetical protein NIDE3446 [Candidatus Nitrospira defluvii] gi|300606799|emb|CBK43132.1| conserved protein of unknown function [Candidatus Nitrospira defluvii] Length = 277 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 38/163 (23%) Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES------- 127 +A + Q +P + VA +L Q A + + ++ + + Sbjct: 93 QAINLYKQVVDQYPRSPVAPLALFHLGNAQVLANEVDAGIETYKRFMLLHGSNTSLLGLV 152 Query: 128 -KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + + Y Y + G DQ ++ + I+E + GA V Sbjct: 153 QQRMAYAYLVKG----------DRDQ-----AVKAFTGILE-------IPGALNKDHVLF 190 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 LA E + A+ +Q ++ NY ++ EA Sbjct: 191 E-LAKLE-------ESQSRPEGALAHYQDLMKNYPNSPFTSEA 225 >gi|297569747|ref|YP_003691091.1| hypothetical protein DaAHT2_1781 [Desulfurivibrio alkaliphilus AHT2] gi|296925662|gb|ADH86472.1| hypothetical protein DaAHT2_1781 [Desulfurivibrio alkaliphilus AHT2] Length = 239 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 57/153 (37%), Gaps = 26/153 (16%) Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 VD Y++G+ YA D + R +L QY ++++ + NSP V A + + + Sbjct: 58 VDLALYVLGLVYA----DPAFKDRNAQLSRQYFAQLIRHFPNSPLVPEANI-LVDLYDAM 112 Query: 190 AAKEVEIGRYYLKRG-----------------EYVAAIPRFQLVLANYSDAEHAEEAMAR 232 AA+++ I + + A + + +L A+EA+ Sbjct: 113 AARDLAIATLSERLKTASEATAALPRPLVEDQNFEEAARKNEQILQQAGAGPPADEALYN 172 Query: 233 LVEAYVALA----LMDEAREVVSLIQERYPQGY 261 L Y +AR+ + I +P Sbjct: 173 LGLIYAHGDNPARDYQQARDYFARIAGEFPDSR 205 >gi|228470608|ref|ZP_04055465.1| putative TPR domain protein [Porphyromonas uenonis 60-3] gi|228307735|gb|EEK16711.1| putative TPR domain protein [Porphyromonas uenonis 60-3] Length = 1003 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 61/172 (35%), Gaps = 24/172 (13%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y G Y A EE P+++ Y Y+ + D+ ++ K + Sbjct: 545 LGDAHYMQGHYTPAVRYYEEAYRIAPDNQ--VYALYM--------LSDIEGLKKDYKAQI 594 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 + +++ R+ NS Y A +Q A E+ G++ AI F + Sbjct: 595 AALDKLIARHPNSLYKPRA------MYDQGRAMELY--------GQHAEAIGTFTRLTQE 640 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Y +E+ +A +L Y + A E + PQ A+ +K Sbjct: 641 YPQSEYGRKAALQLALLYYNRNETNRAIETYKALLAEAPQSGEAKQAYEALK 692 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 34/78 (43%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 R +Y++ ++A F + ++++P + RK+ L A + Y+ + +A Sbjct: 611 PRAMYDQGRAMELYGQHAEAIGTFTRLTQEYPQSEYGRKAALQLALLYYNRNETNRAIET 670 Query: 117 GEEYITQYPESKNVDYVY 134 + + + P+S Y Sbjct: 671 YKALLAEAPQSGEAKQAY 688 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 11/111 (9%), Positives = 33/111 (29%), Gaps = 8/111 (7%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 ++++ ++ P + +++ G++ +A +YP+S+ Sbjct: 587 KKDYKAQIAALDKLIARHPNSLYKPRAMYDQGRAMELYGQHAEAIGTFTRLTQEYPQSEY 646 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + + Y T ++ ++ S K A Sbjct: 647 GRKAALQLALLYYNR--------NETNRAIETYKALLAEAPQSGEAKQAYE 689 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 23/214 (10%), Positives = 58/214 (27%), Gaps = 44/214 (20%) Query: 64 AVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA--------- 113 A L ++ + +A + ++ + + + + + Q +Y A Sbjct: 470 AQLLSQQGAYKRASQALTAILNKRTATSAQLQIARYLLGYSQIKQKQYSAATQTLSILLQ 529 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + + + +Y+ Q ++Y ++ Sbjct: 530 EGTLDNTLQAD-VHARLGDAHYM---------------QGHYTPAVRYYEEAYRIAPDNQ 573 Query: 174 -YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 Y + + +Y A I ++A + ++ + AM Sbjct: 574 VYALYMLSDIEGLK-----------------KDYKAQIAALDKLIARHPNSLYKPRAMYD 616 Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 A EA + + + YPQ + R Sbjct: 617 QGRAMELYGQHAEAIGTFTRLTQEYPQSEYGRKA 650 >gi|254482551|ref|ZP_05095790.1| tol-pal system protein YbgF, putative [marine gamma proteobacterium HTCC2148] gi|214037242|gb|EEB77910.1| tol-pal system protein YbgF, putative [marine gamma proteobacterium HTCC2148] Length = 325 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 36/82 (43%), Gaps = 6/82 (7%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A+ + +++QA ++++ YP+ K +Y +G Y + D + Q Sbjct: 207 AYSLVRSQQFEQAVGAFQQFLRNYPDGKYAPNAHYWLGELY------LVIDPSDLEASRQ 260 Query: 161 YMSRIVERYTNSPYVKGARFYV 182 + ++ +Y ++P A + + Sbjct: 261 AFTLLLNQYPDNPKAPDAMYKL 282 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 51/145 (35%), Gaps = 15/145 (10%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG- 108 +++ + + Y A ++ Q F +A F Q R++P A + + Sbjct: 193 QASEIPGEGDAYRGAYSLVRSQQFEQAVGAFQQFLRNYPDGKYAPNAHYWLGELYLVIDP 252 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 + + + QYP++ Y +G V + + + +Y+ R++ Sbjct: 253 SDLEASRQAFTLLLNQYPDNPKAPDAMYKLG--------KVQFLKGNREKSKEYLDRVI- 303 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAK 192 S Y V + R+ LA Sbjct: 304 ----SKYGSTNSSAVQLSRDFLAEN 324 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 40/105 (38%), Gaps = 12/105 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + + + + + Y + Y A +++ + ++E A+ Sbjct: 214 QQFEQAVGAFQQFLRNYPDGKYAPNAHYWLGELYLVIDPSDLE------------ASRQA 261 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 F L+L Y D A +AM +L + ++++E + + +Y Sbjct: 262 FTLLLNQYPDNPKAPDAMYKLGKVQFLKGNREKSKEYLDRVISKY 306 >gi|150021658|ref|YP_001307012.1| TPR repeat-containing protein [Thermosipho melanesiensis BI429] gi|149794179|gb|ABR31627.1| Tetratricopeptide TPR_2 repeat protein [Thermosipho melanesiensis BI429] Length = 367 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 41/127 (32%), Gaps = 28/127 (22%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE---------EYITQY 124 KA E FN P + L + + Y Y + +L E + Y Sbjct: 258 EKAVELFNSID---PNNIETLRFLWLMGYEYYKQKNYLMSLNLLEFVIDKSLALNFKDLY 314 Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 +D +Y + Y + I D + +ER+ S YVK ++ Sbjct: 315 ----FLDDAFYYRALIYYE-IGDFER-------AYSLFNDFIERFPKSIYVKHSK----Y 358 Query: 185 GRNQLAA 191 N+L Sbjct: 359 FINRLGG 365 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 31/73 (42%), Gaps = 5/73 (6%) Query: 200 YLKRGEYVAAIPRFQLVLA-----NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 Y K+ Y+ ++ + V+ N+ D ++A Y + + A + + Sbjct: 285 YYKQKNYLMSLNLLEFVIDKSLALNFKDLYFLDDAFYYRALIYYEIGDFERAYSLFNDFI 344 Query: 255 ERYPQGYWARYVE 267 ER+P+ + ++ + Sbjct: 345 ERFPKSIYVKHSK 357 >gi|261403119|ref|YP_003247343.1| serine/threonine protein kinase with TPR repeats [Methanocaldococcus vulcanius M7] gi|261370112|gb|ACX72861.1| serine/threonine protein kinase with TPR repeats [Methanocaldococcus vulcanius M7] Length = 1173 Score = 54.0 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 74/225 (32%), Gaps = 43/225 (19%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKS 96 + S + + ++ E+ + A + ++ A + +N+ + P Sbjct: 136 SKNSIAKAKIKMIENILRIEEINKTAKNLFNKGKYNDAIKLYNEALKLDPKNDVLWN--- 192 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 V Y+ YQ A E+ ++ P+++ Y + + D R K Sbjct: 193 --NCGNVYYALKDYQMALKCYEKALSLNPKNEL---AMYNKAL--------ILKDMREYK 239 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVT-VGRNQL--------------AAKEVEIGRYYL 201 L ++ ++ + V R + N L A KE + G YY Sbjct: 240 KALSIINTLMHLNPKNEKVFELRKKIIAEIGNNLNQSDNNSKFPTLQKAVKEYKNGNYYK 299 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 AI L++ + E + L +AY+ + +A Sbjct: 300 -------AIELLNQCLSSNENDT---EVLRYLGDAYLNIGNYSKA 334 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 32/94 (34%), Gaps = 22/94 (23%) Query: 64 AVLFLKEQNFSKAYEYFNQC------------SRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 +L N+SKA E FN+ ++ + + L Y Y+ Sbjct: 322 GDAYLNIGNYSKALECFNKILKTNNKNVNAKNKINYVANRLKSEGL-----AHYKNRNYK 376 Query: 112 QAASLGEEYITQYPESKNVD-YVYYLVGMSYAQM 144 A L +EY+ D YY + Y ++ Sbjct: 377 DALILLDEYLK----HNKKDTEAYYFKALCYEKL 406 Score = 35.5 bits (81), Expect = 8.6, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 6/60 (10%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-----GVARKSLLM-SAFVQYSAGKYQQAA 114 YE + ++++ A +Y+ +++ +K LL A Y+ G Y A Sbjct: 573 YEFGNILYNKRDYENAIKYYQFIEKNYTNNLKNKIICRKKDLLEKIANCYYNLGDYNNAL 632 >gi|307150089|ref|YP_003885473.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822] gi|306980317|gb|ADN12198.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822] Length = 593 Score = 54.0 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 6/89 (6%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 Y Y + + + +++ KA E +NQ + P + A FV Y KY QA Sbjct: 393 YLNAYYNRGLAYYHLEDYDKAIEDYNQALKLDPQSSYAYNGR---GFVYYQLKKYDQALE 449 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + +T P+ + Y Y+ G+SY QM Sbjct: 450 DYNQALTLNPQ---LIYAYWNRGLSYHQM 475 >gi|332830423|gb|EGK03051.1| hypothetical protein HMPREF9455_01301 [Dysgonomonas gadei ATCC BAA-286] Length = 998 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 72/224 (32%), Gaps = 35/224 (15%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR--DFPFAGVARKSLLMS 100 S + S Y +Y A +++N+SKA F + + +L Sbjct: 491 SSYIAQASTKQQNYPLALYNLAYTDFQQKNYSKALTNFKKYISAETNRQSPNYPDALNRI 550 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + A S + + P N DY + QR + Sbjct: 551 GDCYLYNRNFSDAESYYSQAVNVNPA--NADYSEFQKAFVLGL--------QRNYNGKVS 600 Query: 161 YMSRIVERYTNSPYVKGA----------------------RFYVTVGRNQLAAKE-VEIG 197 ++ ++ +Y NS Y A + ++ LA K V++G Sbjct: 601 ALNNMMTKYPNSQYYDNALFEKSRALVMLNKEPEAISVLEKLLKEYSKSNLAQKAGVQLG 660 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 + Y +I ++ V+ NY ++E A A+ + Y + Sbjct: 661 QLYFNTNNPQKSIAAYKEVVNNYPNSEEARTAIQSMEGVYKDIN 704 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 71/229 (31%), Gaps = 27/229 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A ++ + +A F + + Y G + + G +Y Sbjct: 177 YYLAYANFQDGEYEQAIPIFRKLKNK---GEYKESATFFLVQTSYLQGNLSETVAEGRDY 233 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVP-------YDQRATKLMLQYMSRIVERYTNSP 173 I YP S N VY L+G SY + Y + T M ++ E Y + Sbjct: 234 IATYPGSTNTAEVYRLLGNSYYRQGDARNSIVSYEKYLESTTTTFRDDMYQLAEAYYQTN 293 Query: 174 ---YVKGARFYVTVGRNQL---AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 A + L A + +G+ YLK + AI F + +E Sbjct: 294 AHGNAINALKRDVASTDDLLGQAGY-MLLGQSYLKVNDMPNAIMAFDAAARTRFNKTISE 352 Query: 228 EAMARLVEAYVAL------ALMDEAREVVSLIQERYPQGYWARYVETLV 270 EA+ YV L + +A YP + V + Sbjct: 353 EALY----NYVMLMNRGGGSAFGQAITASQRFLTEYPSSKYTDEVNEAL 397 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 67/219 (30%), Gaps = 39/219 (17%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRD-------FPFAGVARKSLLMSAFVQYSAGK 109 + + L ++ N+ A ++ +P +L A+ + Sbjct: 467 NEAYFWRGDLAYRKGNYPAAARDYSSYIAQASTKQQNYP------LALYNLAYTDFQQKN 520 Query: 110 YQQAASLGEEYIT--QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 Y +A + ++YI+ +S N +G Y R Y S+ V Sbjct: 521 YSKALTNFKKYISAETNRQSPNYPDALNRIGDCYLYN--------RNFSDAESYYSQAVN 572 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 + + +G + Y + ++ Y ++++ + Sbjct: 573 VNPANADYSEFQKAFVLGLQR----------------NYNGKVSALNNMMTKYPNSQYYD 616 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 A+ A V L EA V+ + + Y + A+ Sbjct: 617 NALFEKSRALVMLNKEPEAISVLEKLLKEYSKSNLAQKA 655 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 25/207 (12%), Positives = 73/207 (35%), Gaps = 45/207 (21%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 Y ++EK+ + +A + +++ + +A+K+ + + ++ Q++ + Sbjct: 615 YDNALFEKSRALVMLNKEPEAISVLEKLLKEYSKSNLAQKAGVQLGQLYFNTNNPQKSIA 674 Query: 116 LGEEYITQYPESKNV------------------DYVYYL----VGMSYAQMIRDV----- 148 +E + YP S+ Y Y+ G + +D Sbjct: 675 AYKEVVNNYPNSEEARTAIQSMEGVYKDINDIGSYASYVNSQGKGTVLSASRQDSLTYLA 734 Query: 149 ---PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 Y + ++R ++ Y N + A +G + + Sbjct: 735 AENVYMKGRKDESKTALNRYLQTYPNGVFASDA--------------HFYLGSMAFEAKD 780 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMAR 232 + +A+ F+ V+ + ++ ++ ++A+ Sbjct: 781 FTSALGNFKEVINS-NNPKYIDDALIY 806 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 27/221 (12%), Positives = 61/221 (27%), Gaps = 29/221 (13%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++V + +Y + +N+ AY + + + + L Sbjct: 789 KEVINSNNPKYIDDALIYASGIE-FDRKNYEAAYGAYEHLNMVASKSENKDVAQLGMLRC 847 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y K Q + ++ + + + G S + ++ + + Sbjct: 848 AYLMKKDQDVVAAADKLLQNKASGSVANEARFYRGQSLKNL--------GQSEKAIADLQ 899 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 + K R A + + Y + Y A + Q + Sbjct: 900 EV---------AKDTRSAFG------AESQYLLADIYYQAKSYDKAEKQIQSFMKE--GT 942 Query: 224 EHAE---EAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 H A+ L + Y A +AR+ + +Q Y Sbjct: 943 PHEYWMARAIVVLSDVYAAKGDKFQARQYLESLQANYKGTE 983 >gi|307300473|ref|ZP_07580253.1| tol-pal system protein YbgF [Sinorhizobium meliloti BL225C] gi|307318338|ref|ZP_07597773.1| tol-pal system protein YbgF [Sinorhizobium meliloti AK83] gi|306896020|gb|EFN26771.1| tol-pal system protein YbgF [Sinorhizobium meliloti AK83] gi|306904639|gb|EFN35223.1| tol-pal system protein YbgF [Sinorhizobium meliloti BL225C] Length = 345 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 45/155 (29%), Gaps = 17/155 (10%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRY---QREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 G + DS ++Y+ + ++S A + F F Sbjct: 192 TGLATQGGGLNDNPGSVPDSGQATASLSDPGDLYQAGYSHVLSGDYSIAEQEFRDYLDAF 251 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES---KNVDYVYYLVGMSYAQM 144 P A + QYS GKY A + ++ + + +GMS + Sbjct: 252 PSGDKAADASFWMGEAQYSQGKYSDA---AKTFLNAHQSHGKSPKAPEMLLKLGMSLGAL 308 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + + + +RY + A+ Sbjct: 309 DNK--------ETACATLREVNKRYPKASPAVKAK 335 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 36/104 (34%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 Q ++ + + A F++ + +G+Y A F Sbjct: 240 AEQEFRDYLDAFPSGDKAADASFWMGEAQ--------------YSQGKYSDAAKTFLNAH 285 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 ++ + A E + +L + AL + A + + +RYP+ Sbjct: 286 QSHGKSPKAPEMLLKLGMSLGALDNKETACATLREVNKRYPKAS 329 >gi|296451441|ref|ZP_06893178.1| probable multiprotein complex assembly protein [Clostridium difficile NAP08] gi|296880210|ref|ZP_06904176.1| probable multiprotein complex assembly protein [Clostridium difficile NAP07] gi|296259708|gb|EFH06566.1| probable multiprotein complex assembly protein [Clostridium difficile NAP08] gi|296428799|gb|EFH14680.1| probable multiprotein complex assembly protein [Clostridium difficile NAP07] Length = 465 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 46/132 (34%), Gaps = 9/132 (6%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++ + V + ++Y +A+ K++ + KA E F +S+ A Sbjct: 330 KNKEPERKITVADEEDLYYQALDLKKKKEYEKAIENFKSIVSSGKTKKYISESIYQLAIT 389 Query: 104 QYSAGKYQQAASLGEEYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 G +A ++YI Y + D YY +GM Y D K Q Sbjct: 390 NKLLGNKDEAIKYYKKYINTYTKNDQYYDDSYYELGMLYY--------DNGDLKNAQQTF 441 Query: 163 SRIVERYTNSPY 174 + +S Y Sbjct: 442 YSLRSEVPDSMY 453 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 39/106 (36%), Gaps = 10/106 (9%) Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGR----YYL-----KRGEYVAAIPRFQLVLANYSD 222 S ++ + +N+ +++ + YY K+ EY AI F+ ++++ Sbjct: 316 SKKLEKTNKELNEVKNKEPERKITVADEEDLYYQALDLKKKKEYEKAIENFKSIVSSGKT 375 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERY-PQGYWARYVE 267 ++ E++ +L L DEA + Y + Sbjct: 376 KKYISESIYQLAITNKLLGNKDEAIKYYKKYINTYTKNDQYYDDSY 421 >gi|323697805|ref|ZP_08109717.1| tol-pal system protein YbgF [Desulfovibrio sp. ND132] gi|323457737|gb|EGB13602.1| tol-pal system protein YbgF [Desulfovibrio desulfuricans ND132] Length = 319 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 49/134 (36%), Gaps = 8/134 (5%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + +Y+KA KE N+ +A Y+ + + F ++ Y Y + Sbjct: 194 DTDPAKALYDKAYALYKEGNYERARSYWAEFTDTFKGHAFTPSAVFWQGQCYYMLKDYAR 253 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A L E+ I +Y +S G S+ ++ +L I++++ + Sbjct: 254 AVILYEDVIEKYQKSSKYKAALLRAGYSWERL--------GKPELAKMRFEEIIKKFPKT 305 Query: 173 PYVKGARFYVTVGR 186 A+ + + Sbjct: 306 VEATQAKRSLDKMK 319 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 22/135 (16%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 K+L A+ Y G Y++A S E+ + + G Y M++D Sbjct: 199 KALYDKAYALYKEGNYERARSYWAEFTDTFKGHAFTPSAVFWQGQCYY-MLKDYAR---- 253 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 + ++E+Y S K A +L E+ A RF+ Sbjct: 254 ---AVILYEDVIEKYQKSSKYKAALLRAGYSWERLGKPEL--------------AKMRFE 296 Query: 215 LVLANYSDAEHAEEA 229 ++ + A +A Sbjct: 297 EIIKKFPKTVEATQA 311 Score = 39.3 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 27/61 (44%) Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y +Y A+ ++ V+ Y + + A+ R ++ L + A+ I +++P+ Sbjct: 245 YYMLKDYARAVILYEDVIEKYQKSSKYKAALLRAGYSWERLGKPELAKMRFEEIIKKFPK 304 Query: 260 G 260 Sbjct: 305 T 305 >gi|124514248|gb|EAY55762.1| protein of unknown function [Leptospirillum rubarum] Length = 264 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 51/136 (37%), Gaps = 25/136 (18%) Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAA--------KE--------VEIGRYYLK- 202 Q ++V+ Y +S K A ++ +NQLA E +I +Y + Sbjct: 106 QLFEKVVKDYPDSSSAKVAPLFLASIQNQLAQPQKAVNWLHEGLEKNSGDTKILPFYYES 165 Query: 203 -------RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 EY A+ FQ V+ + A+ A + + Y L A +Q+ Sbjct: 166 LGVTFMSMKEYDQALAMFQKVIK-FQGKTLADAAYYNIGKVYELLNQPALAILNYRKLQK 224 Query: 256 RYPQGYWARYVETLVK 271 ++P WA E +K Sbjct: 225 KFPSSPWASEAEAYIK 240 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 83/217 (38%), Gaps = 30/217 (13%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L ++A LV + ++ + +++ K + K+ ++S + F + Sbjct: 53 LVGLVALAGVGLVWHIYSDKKKKEQEAAALETHAEQMFSKNMQN-KKADWSSIDQLFEKV 111 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV-DYVYYLVGMSYA 142 +D+P + A+ + L A +Q + Q+A + E + + + + Y +G+++ Sbjct: 112 VKDYPDSSSAKVAPLFLASIQNQLAQPQKAVNWLHEGLEKNSGDTKILPFYYESLGVTFM 171 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 M YDQ L ++++ + A +Y IG+ Y Sbjct: 172 SMK---EYDQ-----ALAMFQKVIKF--QGKTLADAAYY-------------NIGKVYEL 208 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + AI ++ + + + A EA EAY+ Sbjct: 209 LNQPALAILNYRKLQKKFPSSPWASEA-----EAYIK 240 >gi|108758700|ref|YP_628650.1| putative lipoprotein [Myxococcus xanthus DK 1622] gi|108462580|gb|ABF87765.1| putative lipoprotein [Myxococcus xanthus DK 1622] Length = 301 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 51/164 (31%), Gaps = 23/164 (14%) Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR------ 179 + L + +QR K + ++++ SP +R Sbjct: 53 RHDSSPEALVLRARALKGAADVYWLEQRKVKEAVGVYRELIQQCPESPEALESRIILADL 112 Query: 180 FYVTV-----GRNQL-----------AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 V +QL A + + Y + G+Y + V+ + + Sbjct: 113 LRVHYRDLRGAIDQLTAALKLNPPQGAELHYLVTKLYFELGDYQQCELETRRVMERFPTS 172 Query: 224 EHAEEAMARLVEAYVAL-ALMDEAREVVSLIQERYPQGYWARYV 266 + ++A+ +A + EA + ++ R+P A + Sbjct: 173 AYVDDALYLQAQAIAMMEGRRQEASRTFADLRTRFPDSELAPHA 216 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 32/93 (34%), Gaps = 7/93 (7%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + G YQQ + ++P S VD YL + A M + + + + Sbjct: 149 YFELGDYQQCELETRRVMERFPTSAYVDDALYLQAQAIAMM-------EGRRQEASRTFA 201 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 + R+ +S A F + R E I Sbjct: 202 DLRTRFPDSELAPHALFEMGKLRADAGENEKAI 234 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 63/185 (34%), Gaps = 28/185 (15%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF---VQYSAGKYQQAASLGEEYITQY 124 L+++ +A + + + P + A +S ++ A V Y + A + Sbjct: 77 LEQRKVKEAVGVYRELIQQCPESPEALESRIILADLLRVHYR--DLRGAIDQLTAALKLN 134 Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 P ++YLV Y ++ + R++ER+ S YV A + Sbjct: 135 P--PQGAELHYLVTKLYFEL--------GDYQQCELETRRVMERFPTSAYVDDALYLQAQ 184 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 + +R E A F + + D+E A A+ + + + Sbjct: 185 AIAMMEG----------RRQE---ASRTFADLRTRFPDSELAPHALFEMGKLRADAGENE 231 Query: 245 EAREV 249 +A E Sbjct: 232 KAIET 236 >gi|46203194|ref|ZP_00208847.1| COG1729: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 335 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 8/88 (9%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 ++ +A+ +Y+QA ++I +P + V Y +G SY Q R Sbjct: 210 QADFEAAYALVRERQYEQAEMSLRQFIQSHPRDRLVPKATYWLGESYLQRNRS------- 262 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYV 182 + + ++ Y NSP A + Sbjct: 263 -REAAEQFLKVSTDYANSPIAPEAMLKL 289 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 44/107 (41%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R + + + ++ + V A +++ G YL+R A + Sbjct: 223 RQYEQAEMSLRQFIQSHPRDRLVPKATYWL--------------GESYLQRNRSREAAEQ 268 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F V +Y+++ A EAM +L + AL +A ++ ++ ++P Sbjct: 269 FLKVSTDYANSPIAPEAMLKLGASLHALGAKAQACATLAEVERKFPS 315 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 31/75 (41%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 D + Y +L+ +A E F + S D+ + +A +++L ++ G Sbjct: 240 PRDRLVPKATYWLGESYLQRNRSREAAEQFLKVSTDYANSPIAPEAMLKLGASLHALGAK 299 Query: 111 QQAASLGEEYITQYP 125 QA + E ++P Sbjct: 300 AQACATLAEVERKFP 314 >gi|332298360|ref|YP_004440282.1| Tetratricopeptide TPR_2 repeat-containing protein [Treponema brennaborense DSM 12168] gi|332181463|gb|AEE17151.1| Tetratricopeptide TPR_2 repeat-containing protein [Treponema brennaborense DSM 12168] Length = 372 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 51/171 (29%), Gaps = 15/171 (8%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + +Y + + +++ A + FP L Y G Y +A Sbjct: 62 PQEESLYMLILSEMFAEDYGGALGDCDWFVTLFPGGTYYPLVLYQRGRALYYQGSYDEAV 121 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + E+ YP + + + S+ R+V + Sbjct: 122 AQLTEFCHLYPAHEMYPSALFWIAESFFFEYNYS--------AAKVLYERLVSDFPRDAK 173 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKR---GEYVAAIPRFQLVLANYSD 222 ++ + ++ E E YL + EY+AA ++ L Y Sbjct: 174 AVESQNRLR----SISQYEREEKLLYLLKVVGEEYLAAKESYEKELKQYRT 220 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 59/198 (29%), Gaps = 32/198 (16%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFA 90 VC LV + L D + + + +++ A +F + P Sbjct: 9 VCALVLCVSAAG----LCVPEDKSAGSALLLQGYEAFRAEDWVSALFFFRKAVNVAAPQ- 63 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 +SL M + A Y A + ++T +P V Y G + Sbjct: 64 ---EESLYMLILSEMFAEDYGGALGDCDWFVTLFPGGTYYPLVLYQRGRALYY------- 113 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 Q + + ++ Y A I + Y AA Sbjct: 114 -QGSYDEAVAQLTEFCHLYPAHEMYPSAL--------------FWIAESFFFEYNYSAAK 158 Query: 211 PRFQLVLANYS-DAEHAE 227 ++ +++++ DA+ E Sbjct: 159 VLYERLVSDFPRDAKAVE 176 >gi|259909068|ref|YP_002649424.1| tol-pal system protein YbgF [Erwinia pyrifoliae Ep1/96] gi|224964690|emb|CAX56207.1| conserved uncharacterized protein [Erwinia pyrifoliae Ep1/96] gi|283479094|emb|CAY75010.1| Hypothetical protein ybgF precursor [Erwinia pyrifoliae DSM 12163] Length = 265 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 9/126 (7%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y AV L+++ + A F + +P + + + Y+ GK AA Sbjct: 148 YNAAVALVLEKKQYDNAISAFQAFVKQYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAT 207 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + ++P+S VG+ + ++++ Y+NS K A+ Sbjct: 208 VVKKFPKSPKSADALLKVGVIMQEKGDKA--------KAKAVYQQVIKLYSNSEAAKTAQ 259 Query: 180 FYVTVG 185 Sbjct: 260 KRFASL 265 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 46/127 (36%), Gaps = 22/127 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y A S + ++ QYP+S Y +G + Y + +V+ Sbjct: 159 KQYDNAISAFQAFVKQYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFATVVK 210 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 ++ SP A V V ++G+ A +Q V+ YS++E A+ Sbjct: 211 KFPKSPKSADALLKVGVIMQ--------------EKGDKAKAKAVYQQVIKLYSNSEAAK 256 Query: 228 EAMARLV 234 A R Sbjct: 257 TAQKRFA 263 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ +Y AI FQ + Y D+ + A L + D+A + + +++P+ Sbjct: 156 LEKKQYDNAISAFQAFVKQYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKKFPKS 215 Query: 261 YWARYVETLVK 271 + + L+K Sbjct: 216 --PKSADALLK 224 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 1/86 (1%) Query: 46 VYLDSVTDVRY-QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 ++ D Y Y L + A YF + FP + + +LL + Sbjct: 170 AFVKQYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKKFPKSPKSADALLKVGVIM 229 Query: 105 YSAGKYQQAASLGEEYITQYPESKNV 130 G +A ++ ++ I Y S+ Sbjct: 230 QEKGDKAKAKAVYQQVIKLYSNSEAA 255 >gi|83645384|ref|YP_433819.1| hypothetical protein HCH_02602 [Hahella chejuensis KCTC 2396] gi|83633427|gb|ABC29394.1| uncharacterized protein conserved in bacteria [Hahella chejuensis KCTC 2396] Length = 963 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 27/212 (12%), Positives = 61/212 (28%), Gaps = 48/212 (22%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSLLMSAFVQYSAGKYQQAA----S 115 + + +++A + +++ P +A A Y G+ AA Sbjct: 579 HSQFELKQYAEAEKSYSRVLALMPANDKRRGEIAEL----LAASIYKQGELMLAANDVNG 634 Query: 116 LGEEYITQYPESK------NVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 ++++ + N DY Y+ Q + ++ + Sbjct: 635 AIDQFLRVGQAAPTASVRANADYDAATYM-------------LQQGQWDRAISVLNGFRQ 681 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 RY K + + Y ++ AA ++ ++ D E Sbjct: 682 RYPQHELAKDVPAKLAMA--------------YRNTEQWDAAAGELAVISQSHPDGETRR 727 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 E++ E Y +A + YP+ Sbjct: 728 ESLLLSAELYEKSGQTQKAIDTYRDYANSYPE 759 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A S E + +YP D V Y + +Y R D ++R+V+ Y Sbjct: 109 FAVAISAYEGLLKKYPNRAENDQVLYQLAKAYDLEGR---RD-----DSFNALNRLVKEY 160 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 S Y A+F G+Y A+ F+ V+ + ++A Sbjct: 161 PRSSYFHEAQFRRGEIL--------------FTNGDYDASQRAFESVIRGGAKTGFEQQA 206 Query: 230 MAR 232 + Sbjct: 207 LYM 209 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Query: 205 EYVA-AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 Y A AI ++ +L Y + ++ + +L +AY D++ ++ + + YP+ + Sbjct: 107 AYFAVAISAYEGLLKKYPNRAENDQVLYQLAKAYDLEGRRDDSFNALNRLVKEYPRSSYF 166 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 77/217 (35%), Gaps = 18/217 (8%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAG 108 +D R + A +++ +A + + ++ P A + L+ + Q+ Sbjct: 526 ASDPRAGAVMASAAEKLFAMKDYPRAIDVAQRLTQRTPPPDNASLLGAWLIISHSQFELK 585 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y +A + P + G A+++ Y Q L ++ +++ Sbjct: 586 QYAEAEKSYSRVLALMPANDK------RRGEI-AELLAASIYKQGELMLAANDVNGAIDQ 638 Query: 169 Y-TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 + A A + + Y L++G++ AI Y E A+ Sbjct: 639 FLRVGQAAPTASVR--------ANADYDAATYMLQQGQWDRAISVLNGFRQRYPQHELAK 690 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 + A+L AY D A +++I + +P G R Sbjct: 691 DVPAKLAMAYRNTEQWDAAAGELAVISQSHPDGETRR 727 Score = 38.6 bits (89), Expect = 0.97, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 35/122 (28%), Gaps = 8/122 (6%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + T Y+ A L++ + +A N + +P +A+ A + + Sbjct: 646 APTASVRANADYDAATYMLQQGQWDRAISVLNGFRQRYPQHELAKDVPAKLAMAYRNTEQ 705 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + AA +P+ + L Y + T+ + Y Sbjct: 706 WDAAAGELAVISQSHPDGETRRESLLLSAELYEKS--------GQTQKAIDTYRDYANSY 757 Query: 170 TN 171 Sbjct: 758 PE 759 >gi|283780238|ref|YP_003370993.1| hypothetical protein Psta_2464 [Pirellula staleyi DSM 6068] gi|283438691|gb|ADB17133.1| Tetratricopeptide domain protein [Pirellula staleyi DSM 6068] Length = 638 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 10/123 (8%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A + + A F R +P + A + L +A V +Y++A SL I Sbjct: 244 RARQLQQARQLDAAIAQFTAIYRQYPNSPQAPLAKLGAARVHLEQKQYREAESLLAS-ID 302 Query: 123 QYPES-KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + + N+D V Y G + A M + R+ + + +S Y A + Sbjct: 303 ENGANVTNLDAVLYERGWALAMM--------EVLTKSDELFQRLHKEFPHSIYWADATYR 354 Query: 182 VTV 184 + Sbjct: 355 LAE 357 >gi|332709397|ref|ZP_08429359.1| hypothetical protein LYNGBM3L_39350 [Lyngbya majuscula 3L] gi|332351943|gb|EGJ31521.1| hypothetical protein LYNGBM3L_39350 [Lyngbya majuscula 3L] Length = 932 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 73/203 (35%), Gaps = 27/203 (13%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE--QNFSKAYEYFNQCSRDFPFAGVARKS 96 + Q+ +D L + ++ A L E QN E + + P + Sbjct: 583 DAQTEKDKILQQLAEISPT----SIAEAALSEVLQNTQTLTEQLERLKSNHPKLFLNPDD 638 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + +S G+YQ A + ++ + P + ++ +Y GM+ ++ + + Sbjct: 639 YVNQGNTLFSQGQYQDAIASYDQVLDLQPNNPDI---WYQRGMALWEL--------QQYQ 687 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY----LKRGEYVAAIPR 212 + +++E + P + + + +L E + + K Y A + R Sbjct: 688 DAIASYDKVIEIKPDDP---DSWYQRGLALMELRRYEGAVVAFNKVVKFKPDHYKAWLNR 744 Query: 213 FQLV--LANYSDAEH-AEEAMAR 232 + L Y DA ++A+ Sbjct: 745 GMTLRRLRRYEDAIASYDKALEI 767 >gi|145219966|ref|YP_001130675.1| tetratricopeptide domain-containing protein [Prosthecochloris vibrioformis DSM 265] gi|145206130|gb|ABP37173.1| Tetratricopeptide domain protein [Chlorobium phaeovibrioides DSM 265] Length = 269 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 18/133 (13%), Positives = 41/133 (30%), Gaps = 8/133 (6%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S ++ + ++ A E F+ ++ P + +A + A ++ Sbjct: 144 SAPPAAGGSTLFNEGAQLFSNGRYAPAREKFSVLLKESPQSELADDAQFFIAESWFAEKV 203 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y +A + I +Y +S + ++ + +V Y Sbjct: 204 YDKAILDYQVVIAKYTKSNKRPAALFKQARAFELLGDGAN--------AKTRYRDLVNVY 255 Query: 170 TNSPYVKGARFYV 182 SP AR + Sbjct: 256 PKSPEADLARKKM 268 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 34/104 (32%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + S +++ S A+ I + Y AI +Q+V+ Sbjct: 170 AREKFSVLLKESPQSELADDAQ--------------FFIAESWFAEKVYDKAILDYQVVI 215 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A Y+ + A+ + A+ L A+ + YP+ Sbjct: 216 AKYTKSNKRPAALFKQARAFELLGDGANAKTRYRDLVNVYPKSP 259 >gi|302421120|ref|XP_003008390.1| serine/threonine-protein phosphatase [Verticillium albo-atrum VaMs.102] gi|261351536|gb|EEY13964.1| serine/threonine-protein phosphatase [Verticillium albo-atrum VaMs.102] Length = 478 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 15/150 (10%), Positives = 44/150 (29%), Gaps = 23/150 (15%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSA 107 T + + E ++ A ++ + + P ++ A Sbjct: 2 ATPEEQATALKNQGNKAFAEHDWPTAISFYTKAIDLNDKEP-TYFTNRAQ-----AHIKA 55 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 Y A + ++ + P + ++ G+++ +IR K L+ + Sbjct: 56 ESYGYAIADCDKALALNP---KLVKAHFRRGLAHTAIIR--------PKEALKDFRECIR 104 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 N+ A+ + + + + Sbjct: 105 IDPNNK---DAKLKLDECKKIVRKLDFFAA 131 >gi|218246150|ref|YP_002371521.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801] gi|218166628|gb|ACK65365.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801] Length = 878 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 68/225 (30%), Gaps = 48/225 (21%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ- 104 V+ SV + +++++ K +++A F + P A Sbjct: 18 VFTPSVVLSQSIDQLFQQGRTAGKMGKYTEAEAIFRRVIELDP----------NLADAYN 67 Query: 105 ------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 Y GK +A + ++ I P + + + DQ + Sbjct: 68 NLGNALYYQGKLDEAIAAYQKAIQLNPNDADA-----------YNNLGNALSDQGKLEEA 116 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGE 205 + + ++ N Y A + + + + E I Y Y G Sbjct: 117 IAAYQKAIQLNPN--YA-DAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGI 173 Query: 206 YVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEA 246 ++ + + +A Y A + +A L A +DEA Sbjct: 174 ALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGNALFDQGKLDEA 218 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 36/116 (31%), Gaps = 14/116 (12%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 Y Y + +A + + + P + Y GK ++A + Sbjct: 198 YADAYYNLGNALFDQGKLDEAIAAYQKAIQLDPNDA---NAYNNLGAALYKQGKLEEAIA 254 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 ++ I P N+ Y +G++ + DQ + + ++ N Sbjct: 255 AYQKAIQLNP---NLAEAYNNLGVALS--------DQGKRDEAIAAYQKAIQLNPN 299 Score = 38.9 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 14/110 (12%), Positives = 34/110 (30%), Gaps = 14/110 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + +A + + + P A + YS GK ++A + ++ I Sbjct: 442 NLGLALRNQGKRDEAITAYQKAIQLNP--NFA-LAYNNLGNALYSQGKREEAIAAYQKAI 498 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 P ++Y + + DQ + + ++ N Sbjct: 499 QLNPNF----------ALAYNNLGNALS-DQGKRDEAIAAYQKAIQLNPN 537 >gi|57237956|ref|YP_179205.1| putative lipoprotein [Campylobacter jejuni RM1221] gi|57166760|gb|AAW35539.1| lipoprotein, putative [Campylobacter jejuni RM1221] gi|315058515|gb|ADT72844.1| Putative lipoprotein [Campylobacter jejuni subsp. jejuni S3] Length = 215 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 70/179 (39%), Gaps = 18/179 (10%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L +F S+ F ++ +Y S ++ Y++ + L++++ KA +++N Sbjct: 7 LLVFLSV---FFSACSTKNDEGLYNLSASEW------YKQIIKDLQDKDLEKADDHYNGM 57 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + + + +L++ A +Y+ A +EY ++ S+N DY+ YL + Sbjct: 58 ASEHVADPLLETTLIILAQAHMDEEEYKLAEFYLDEYNKKFGNSRNADYIRYLKIKAKFD 117 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 +Q + + ++ Y + Y + +T + +YL Sbjct: 118 AFAVPNRNQALMLESQKEIDTFLKDYPYTKYEPLVQTMLTK---------FNLAVFYLN 167 >gi|313886111|ref|ZP_07819846.1| tetratricopeptide repeat protein [Porphyromonas asaccharolytica PR426713P-I] gi|312924457|gb|EFR35231.1| tetratricopeptide repeat protein [Porphyromonas asaccharolytica PR426713P-I] Length = 1003 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 55/175 (31%), Gaps = 30/175 (17%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y G Y A EE P+++ Y Y+ + D+ ++ K + Sbjct: 545 LGDAHYMQGHYTPAVRYYEEAYRLAPDNQ--VYALYM--------LSDIEGLKKDYKAQI 594 Query: 160 QYMSRIVERYTNSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + ++V R+ NS Y A + Q A AI F + Sbjct: 595 AALDKLVARHPNSLYKPRAMYDQGRAMELSGQQAE-----------------AIGAFTRL 637 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Y +E+ +A +L Y A E + PQ A+ +K Sbjct: 638 TQEYPQSEYGRKAALQLALLYYNRNETSRAIETYKALLAEAPQSGEAKQAYEALK 692 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 34/78 (43%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 R +Y++ ++A F + ++++P + RK+ L A + Y+ + +A Sbjct: 611 PRAMYDQGRAMELSGQQAEAIGAFTRLTQEYPQSEYGRKAALQLALLYYNRNETSRAIET 670 Query: 117 GEEYITQYPESKNVDYVY 134 + + + P+S Y Sbjct: 671 YKALLAEAPQSGEAKQAY 688 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 11/111 (9%), Positives = 33/111 (29%), Gaps = 8/111 (7%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 ++++ ++ P + +++ +G+ +A +YP+S+ Sbjct: 587 KKDYKAQIAALDKLVARHPNSLYKPRAMYDQGRAMELSGQQAEAIGAFTRLTQEYPQSEY 646 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + + Y T ++ ++ S K A Sbjct: 647 GRKAALQLALLYYNR--------NETSRAIETYKALLAEAPQSGEAKQAYE 689 Score = 35.5 bits (81), Expect = 8.6, Method: Composition-based stats. Identities = 24/214 (11%), Positives = 58/214 (27%), Gaps = 44/214 (20%) Query: 64 AVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA--------- 113 A L ++ + +A + S+ + + + + + Q +Y A Sbjct: 470 AQLLSQQGAYKQAAQALTAILSKRAASSKQLQIARYLLGYSQIRQQQYGAATQTLSILLQ 529 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + + + +Y+ Q ++Y ++ Sbjct: 530 EGTLDNTLQAD-VHARLGDAHYM---------------QGHYTPAVRYYEEAYRLAPDNQ 573 Query: 174 -YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 Y + + +Y A I ++A + ++ + AM Sbjct: 574 VYALYMLSDIEGLK-----------------KDYKAQIAALDKLVARHPNSLYKPRAMYD 616 Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 A EA + + + YPQ + R Sbjct: 617 QGRAMELSGQQAEAIGAFTRLTQEYPQSEYGRKA 650 >gi|195953482|ref|YP_002121772.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp. Y04AAS1] gi|195933094|gb|ACG57794.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp. Y04AAS1] Length = 272 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 32/158 (20%) Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 + P + + L A+ Y +G YQ+A L +E+I + P SK + YY +GM Sbjct: 136 LQALISNTPQSP---QELYGMAYTAYQSGDYQKAKRLFKEFILKNPHSKLTNNAYYWLGM 192 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVER-----YTNSPYVKGARFYVTVGRNQLAAKEV 194 + M L + ++++ + A Sbjct: 193 AEKAMH--------HNNEALAILLSLIDKCKKGELPSCDKAPSAY--------------F 230 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 Y + G+ AAI ++ ++ Y ++ E A+AR Sbjct: 231 SAANIYREMGQKSAAINLYKELIKLYPNS--IEAALAR 266 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 47/162 (29%), Gaps = 27/162 (16%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 SS ++ + +E+Y A + ++ KA F + P + + + Sbjct: 131 SSSSNLQALISNTPQSPQELYGMAYTAYQSGDYQKAKRLFKEFILKNPHSKLTNNAYYWL 190 Query: 101 AFV----QYSAGKYQQAASLGEEYIT--QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 ++ SL ++ P Y+ Y +M + Sbjct: 191 GMAEKAMHHNNEALAILLSLIDKCKKGEL-PSCDKAPSAYFSAANIYREMGQKS------ 243 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 + +++ Y NS LA E+EI Sbjct: 244 --AAINLYKELIKLYPNSIEAA------------LARSELEI 271 >gi|218782963|ref|YP_002434281.1| hypothetical protein Dalk_5143 [Desulfatibacillum alkenivorans AK-01] gi|218764347|gb|ACL06813.1| conserved hypothetical protein [Desulfatibacillum alkenivorans AK-01] Length = 317 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 35/98 (35%), Gaps = 8/98 (8%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 S L A +S G+Y +A S ++ +P +G SY + D Sbjct: 42 SQLAFAESNFSQGEYYRAVSEYRRFLYFFPNDDRAPQAALRIGQSYY-----LGQDYEEA 96 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + L+ M+ +Y SP A + ++ E Sbjct: 97 QKALKSMAA---QYPQSPLAAEASLLICQCSVKIQDYE 131 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 24/70 (34%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A + + +A + + FP A ++ L Y Y++A + Q Sbjct: 47 AESNFSQGEYYRAVSEYRRFLYFFPNDDRAPQAALRIGQSYYLGQDYEEAQKALKSMAAQ 106 Query: 124 YPESKNVDYV 133 YP+S Sbjct: 107 YPQSPLAAEA 116 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 37/81 (45%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A ++ +GEY A+ ++ L + + + A +A R+ ++Y +EA++ Sbjct: 40 ADSQLAFAESNFSQGEYYRAVSEYRRFLYFFPNDDRAPQAALRIGQSYYLGQDYEEAQKA 99 Query: 250 VSLIQERYPQGYWARYVETLV 270 + + +YPQ A L+ Sbjct: 100 LKSMAAQYPQSPLAAEASLLI 120 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 35/109 (32%), Gaps = 14/109 (12%) Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 + Q + R + + N A IG+ Y +Y Sbjct: 49 SNFSQGEYYRAVSEYRRFLYFFPNDDRAPQAALR--------------IGQSYYLGQDYE 94 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 A + + A Y + A EA + + V + +EAR +S + + Sbjct: 95 EAQKALKSMAAQYPQSPLAAEASLLICQCSVKIQDYEEARTCLSDVVQN 143 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 9/64 (14%), Positives = 24/64 (37%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 D R + + Q++ +A + + +P + +A ++ L+ Y Sbjct: 71 PNDDRAPQAALRIGQSYYLGQDYEEAQKALKSMAAQYPQSPLAAEASLLICQCSVKIQDY 130 Query: 111 QQAA 114 ++A Sbjct: 131 EEAR 134 >gi|260219496|emb|CBA26341.1| hypothetical protein Csp_E34290 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 264 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 49/133 (36%), Gaps = 8/133 (6%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 ++ +E A+ ++ +F+ A F +P +G SL QY+ Y+ A Sbjct: 140 EPSEKRDFEAALAVFRKGDFATAQSVFLDFLNRYPTSGYRPSSLFWLGSAQYATKDYKDA 199 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + + Q + L+ ++ Q + + TK + + ++ Y +S Sbjct: 200 QANFRSLVQQSGDHLRAPEA--LLALANCQS------ELKDTKAARKTLEELIASYPSSE 251 Query: 174 YVKGARFYVTVGR 186 A+ + + Sbjct: 252 AASAAKDRLARLK 264 Score = 40.1 bits (93), Expect = 0.38, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + RY S Y + F++ + +Y A F+ ++ Sbjct: 162 AQSVFLDFLNRYPTSGYRPSSLFWLGSAQ--------------YATKDYKDAQANFRSLV 207 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 D A EA+ L L AR+ + + YP Sbjct: 208 QQSGDHLRAPEALLALANCQSELKDTKAARKTLEELIASYPSSE 251 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 51/147 (34%), Gaps = 22/147 (14%) Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 FA + K +A + G + A S+ +++ +YP S + +G + Sbjct: 138 FAEPSEKRDFEAALAVFRKGDFATAQSVFLDFLNRYPTSGYRPSSLFWLGSAQYAT---- 193 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 + K +V++ + A + +++L + A Sbjct: 194 ----KDYKDAQANFRSLVQQSGDHLRAPEALLALANCQSEL--------------KDTKA 235 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVE 235 A + ++A+Y +E A A RL Sbjct: 236 ARKTLEELIASYPSSEAASAAKDRLAR 262 >gi|332300508|ref|YP_004442429.1| Tetratricopeptide TPR_2 repeat-containing protein [Porphyromonas asaccharolytica DSM 20707] gi|332177571|gb|AEE13261.1| Tetratricopeptide TPR_2 repeat-containing protein [Porphyromonas asaccharolytica DSM 20707] Length = 1003 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 55/175 (31%), Gaps = 30/175 (17%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y G Y A EE P+++ Y Y+ + D+ ++ K + Sbjct: 545 LGDAHYMQGHYTPAVRYYEEAYRLAPDNQ--VYALYM--------LSDIEGLKKDYKAQI 594 Query: 160 QYMSRIVERYTNSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + ++V R+ NS Y A + Q A AI F + Sbjct: 595 AALDKLVARHPNSLYKPRAMYDQGRAMELSGQQAE-----------------AIGAFTRL 637 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Y +E+ +A +L Y A E + PQ A+ +K Sbjct: 638 TQEYPQSEYGRKAALQLALLYYNRNETSRAIETYKALLAEAPQSGEAKQAYEALK 692 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 34/78 (43%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 R +Y++ ++A F + ++++P + RK+ L A + Y+ + +A Sbjct: 611 PRAMYDQGRAMELSGQQAEAIGAFTRLTQEYPQSEYGRKAALQLALLYYNRNETSRAIET 670 Query: 117 GEEYITQYPESKNVDYVY 134 + + + P+S Y Sbjct: 671 YKALLAEAPQSGEAKQAY 688 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 11/111 (9%), Positives = 33/111 (29%), Gaps = 8/111 (7%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 ++++ ++ P + +++ +G+ +A +YP+S+ Sbjct: 587 KKDYKAQIAALDKLVARHPNSLYKPRAMYDQGRAMELSGQQAEAIGAFTRLTQEYPQSEY 646 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + + Y T ++ ++ S K A Sbjct: 647 GRKAALQLALLYYNR--------NETSRAIETYKALLAEAPQSGEAKQAYE 689 Score = 35.5 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 24/214 (11%), Positives = 58/214 (27%), Gaps = 44/214 (20%) Query: 64 AVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA--------- 113 A L ++ + +A + S+ + + + + + Q +Y A Sbjct: 470 AQLLSQQGAYKQAAQALTAILSKRAASSKQLQIARYLLGYSQIRQQQYGAATQTLSILLQ 529 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + + + +Y+ Q ++Y ++ Sbjct: 530 EGTLDNTLQAD-VHARLGDAHYM---------------QGHYTPAVRYYEEAYRLAPDNQ 573 Query: 174 -YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 Y + + +Y A I ++A + ++ + AM Sbjct: 574 VYALYMLSDIEGLK-----------------KDYKAQIAALDKLVARHPNSLYKPRAMYD 616 Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 A EA + + + YPQ + R Sbjct: 617 QGRAMELSGQQAEAIGAFTRLTQEYPQSEYGRKA 650 >gi|119356693|ref|YP_911337.1| membrane lipoprotein lipid attachment site [Chlorobium phaeobacteroides DSM 266] gi|119354042|gb|ABL64913.1| membrane lipoprotein lipid attachment site [Chlorobium phaeobacteroides DSM 266] Length = 256 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 49/144 (34%), Gaps = 8/144 (5%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + S+ + + V + + + + L N S A F+ +++P + + + Sbjct: 121 SAKESQVQPVSPLASVMTDKALLDDGIKKLASNNASGARGSFSLLMKNYPKSELVDDAQF 180 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A S Y++A + I +Y +S Y G+++ + Sbjct: 181 YVAESYLSEKWYEKAVLEYQVVIAKYTKSNKRAVALYKQGLAFELL--------GDAVNA 232 Query: 159 LQYMSRIVERYTNSPYVKGARFYV 182 ++ Y S K A+ + Sbjct: 233 KARFRDVINIYPASAEAKLAKQKL 256 Score = 43.6 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 38/110 (34%), Gaps = 14/110 (12%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 S +++ Y S V A+ + YL Y A+ +Q+V+ Sbjct: 158 ARGSFSLLMKNYPKSELVDDAQ--------------FYVAESYLSEKWYEKAVLEYQVVI 203 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 A Y+ + A+ + A+ L A+ + YP A+ + Sbjct: 204 AKYTKSNKRAVALYKQGLAFELLGDAVNAKARFRDVINIYPASAEAKLAK 253 >gi|288942398|ref|YP_003444638.1| TPR repeat-containing protein [Allochromatium vinosum DSM 180] gi|288897770|gb|ADC63606.1| TPR repeat-containing protein [Allochromatium vinosum DSM 180] Length = 482 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 36/120 (30%), Gaps = 17/120 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + V +E ++ +A F + + ++ G Y AA E Sbjct: 54 YRRGVALYREGDYRQAEHAF----SQAQGGAFDQAARYNLGNTRFKLGDYTGAAEAYESV 109 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + P ++ Y ++ A + +L + E+ + AR Sbjct: 110 LATNPSHEDAAYNL---ALTRAML----------ARLEQEQFREQTEQKPDDKKADDARQ 156 >gi|148926023|ref|ZP_01809709.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845502|gb|EDK22594.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni CG8486] Length = 217 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 72/183 (39%), Gaps = 18/183 (9%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 ++ L +F S+ F ++ +Y S ++ Y++ + L++++ KA ++ Sbjct: 5 KRYFLLVFLSV---FFSACSTKNDEGLYNLSASEW------YKQIIKDLQDKDLEKADDH 55 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 +N + + + +L++ A +Y+ A +EY ++ S+N DY+ YL Sbjct: 56 YNGMASEHVADPLLETTLIILAQAHMDEEEYKLAEFYLDEYNKKFGNSRNADYIRYLKIK 115 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + +Q + + ++ Y + Y + +T + + Sbjct: 116 AKFDAFAVPNRNQALMLESQKEIDTFLKDYPYTKYEPLVQTMLTK---------FNLAVF 166 Query: 200 YLK 202 YL Sbjct: 167 YLN 169 >gi|303248254|ref|ZP_07334517.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio fructosovorans JJ] gi|302490392|gb|EFL50303.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio fructosovorans JJ] Length = 1000 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 65/238 (27%), Gaps = 38/238 (15%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVA 93 G + + D + +A N+ A P + Sbjct: 333 AGKPHGAEGETPPPVEEDHDANVLIAAQAEKL--AGNYETAKNMLINLKN-APGLKPELR 389 Query: 94 RKSLLMSAFVQ---YSAG---KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 ++L A + Y Y + E + S V +GM + Sbjct: 390 EETLHTLAGLYIDMYKDDPVAHYDEIQGALLEAMNANTNSYRVPEALLQLGMLNLRA--- 446 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 Y + + +Y A + G YY RGEY Sbjct: 447 -----GNLPEAKGYFNVLTRKYP-----TDANVPLIN---------FYWGEYYFDRGEYK 487 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 A ++ ++ + ++++ E L + V L EA ++ Y W RY Sbjct: 488 KAAKEYKDLIEKFPESKYVREGAMGLSKTLVRLGQYKEASQIA-----DYINKRWPRY 540 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 64/190 (33%), Gaps = 32/190 (16%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 ++LL + AG +A +YP NV + + +D+ Sbjct: 433 PEALLQLGMLNLRAGNLPEAKGYFNVLTRKYPTDANVP-------LINF-YWGEYYFDRG 484 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IGRYYLKR--GEYV-- 207 K + ++E++ S YV+ ++ +L + I Y KR YV Sbjct: 485 EYKKAAKEYKDLIEKFPESKYVREGAMGLSKTLVRLGQYKEASQIADYINKRWPRYYVEF 544 Query: 208 AAIPR-----------FQLVLANY-------SDAEHAEEAMARLVEAYVALALMDEAREV 249 I R F+ +Y A+ + +ARL + Y L A + Sbjct: 545 PTILRIDGDIAYKNGDFKKARDDYLTFYNMTPKAKDTDLVLARLGDIYAKLGKRPAAVDF 604 Query: 250 VSLIQERYPQ 259 ++ + YP Sbjct: 605 YNMAVKDYPN 614 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 21/52 (40%) Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 + RD P + +A + + A Y ++ ++ +YP+++ Sbjct: 655 YEGIIRDHPNSPLAPLAQIKLAMWHLYRQNYPESLKAAARFLERYPKNELAP 706 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 63/201 (31%), Gaps = 13/201 (6%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + K +F KA + + P A L + GK A + Sbjct: 551 DGDIAYKNGDFKKARDDYLTFYNMTPKAKDTDLVLARLGDIYAKLGKRPAAVDFYNMAVK 610 Query: 123 QYPESKNVDYVYYLVGM-SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 YP + G+ + ++ +DQ M + + + Y R + Sbjct: 611 DYPNQEG--------GLIAKMRLAEQGVHDQPTVSEMFSLFDKPQQESPETIYEGIIRDH 662 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL- 240 LA +++ ++L R Y ++ L Y E A +A V A+ + Sbjct: 663 PNSPLAPLAQ--IKLAMWHLYRQNYPESLKAAARFLERYPKNELAPKAEEVAVTAFEKMA 720 Query: 241 ALMDEAREVVSLIQERYPQGY 261 + + ++ L+ Y Sbjct: 721 GDLIDHKDYPRLVAA-YKDNP 740 >gi|94264087|ref|ZP_01287886.1| Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1] gi|93455503|gb|EAT05693.1| Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1] Length = 703 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 14/131 (10%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF------VQYSAG 108 +E++E+A ++ A + Q R F + +A+++L +A + Sbjct: 52 DSAQELWERAAAAIEADEPLTAARNYEQIHRQFGQSELAQEALWQAAELRRQLAAKEEDP 111 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Q+ +L Y +YP+S + Y +G+++ QM R + L Y +R Sbjct: 112 DWQRVRNLYRRYTVEYPDSHRREQAYLELGLAHFQM--------RFLREALTYFRLFEQR 163 Query: 169 YTNSPYVKGAR 179 Y +SP + AR Sbjct: 164 YPDSPLLPRAR 174 Score = 42.4 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 8/104 (7%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + +I ++ S + A + R QLAAKE + ++ ++ Sbjct: 73 AARNYEQIHRQFGQSELAQEALWQAAELRRQLAAKE--------EDPDWQRVRNLYRRYT 124 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y D+ E+A L A+ + + EA L ++RYP Sbjct: 125 VEYPDSHRREQAYLELGLAHFQMRFLREALTYFRLFEQRYPDSP 168 >gi|32267088|ref|NP_861120.1| paralysed flagella protein PflA [Helicobacter hepaticus ATCC 51449] gi|32263140|gb|AAP78186.1| paralysed flagella protein PflA [Helicobacter hepaticus ATCC 51449] Length = 789 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 52/131 (39%), Gaps = 13/131 (9%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ--YSA-GKYQQAASLG 117 Y + + QN+ +A + ++ +P A+ LL + + +G Sbjct: 185 YSQIKTLMNNQNYIEAVKLIDETLIGYPKTIFAKDLLLFRLRALESFDSVENSDMIVDMG 244 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 ++I +YP NV V Y +G +YA D R + Y R + Y NS Y+ Sbjct: 245 TKWIKKYPTDANVPEVLYYLGNAYA--------DMRIPQEAKYYFDRTISEYPNSRYMPL 296 Query: 178 ARFYVTVGRNQ 188 A + + +N Sbjct: 297 A--KMALAKNF 305 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 16/46 (34%) Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + Y + E + L AY + + EA+ YP + Sbjct: 248 IKKYPTDANVPEVLYYLGNAYADMRIPQEAKYYFDRTISEYPNSRY 293 >gi|308274171|emb|CBX30770.1| hypothetical protein N47_E42820 [uncultured Desulfobacterium sp.] Length = 765 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 26/220 (11%), Positives = 80/220 (36%), Gaps = 37/220 (16%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++ + D++ + A ++ ++ + + + + + P +++ L++ + Sbjct: 299 KETVDKNPQDIKALSRL---ASFYIDDKKYDEGMKETEKILKINP---KSQEGLVLKGRL 352 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 K+ +A SL + ++ ++ YYL+ M++ + T+ ++ Sbjct: 353 YLVRNKFTEAQSLFQSFLK---DNPKAALGYYLLAMAHYGN--------KETQQAKTALA 401 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 ++ N+ + + + Y++ G Y A+ VL Sbjct: 402 EAIKL--NTKWSEPR---------------FLLANIYMREGAYSEAVNEAMGVLKEQPK- 443 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 +A + +Y+ + EA++ + + P +A Sbjct: 444 --NPKAYLIMGNSYLMQKNIPEAQKSFEELLKIAPNNPFA 481 Score = 39.3 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 73/213 (34%), Gaps = 39/213 (18%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +L ++N +A + F + + P ++ LM K ++A E+ + Sbjct: 452 GNSYLMQKNIPEAQKSFEELLKIAPNNPFAYSQMGRLMLV-----EKKEKEALENFEKAL 506 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P DY L Q I V + + K + + ++ +P++ R Sbjct: 507 KLQP-----DYTEPL------QFIVSVMMNNKDYKKAFERVDEQIKISPKNPFLYNIRAS 555 Query: 182 VTVGRNQL--AAKE---------------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + L A + + +G +YL+ A ++ + D+ Sbjct: 556 LYEFEKDLTNAENDFKKAIELNRDSPALQMALGNFYLRHKTMDKAKKSYEETIKKAPDSL 615 Query: 225 HAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256 +A+ A+ + Y DEA+ +++ Sbjct: 616 NAQMALGMI---YENEKKYDEAKSHYEKVLKIN 645 >gi|294783466|ref|ZP_06748790.1| tetratricopeptide repeat family protein [Fusobacterium sp. 1_1_41FAA] gi|294480344|gb|EFG28121.1| tetratricopeptide repeat family protein [Fusobacterium sp. 1_1_41FAA] Length = 936 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 74/186 (39%), Gaps = 16/186 (8%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + YQ+ ++ FL + N A + + + + +++++ V Y+ Y Sbjct: 123 EKTYQKTLFAVGQDFLSKDNNEAARDVYREIIDKKY---ENNKEAMMGLGIVNYNLKDYD 179 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 +A E+ P+ +N D V YL ++ + T+ ++ ++ Sbjct: 180 KAIYWLSEFQRAKPK-ENKDMVSYLKASAFYRK--------GNTEQAIEDFEKLANISPA 230 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN-YSDAEHAEEAM 230 + Y K A Y+ + K+ E +YL++ + ++ + Y E+ ++A+ Sbjct: 231 NDYSKKAVLYLIEIYSN--KKDEEKVSFYLEKIKGTKEYNTAMTMIGDLYVTKENYDKAL 288 Query: 231 ARLVEA 236 A ++ Sbjct: 289 AYYNQS 294 Score = 42.0 bits (98), Expect = 0.098, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 83/246 (33%), Gaps = 31/246 (12%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 S + L+ ++ + YL SV+D Y K V + + + +A +F Sbjct: 476 IISSLMSSLLDQQKYDEMNQYLSSVSDDNSLN--YLKGVAAMGLKKYDEAETHFQNVLSS 533 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI-TQYPESKNVDYVYYL--VGMSYAQ 143 ++ K L + A +Y +A GE+Y+ P+ + Y L +G+SY + Sbjct: 534 GDQG-LSTKVYLNRVRNFFLAERYNEAIQAGEQYLTRINPDKEKAIYSEMLDKIGLSYFR 592 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 + + YDQ S Y K A + +I Y Sbjct: 593 VGK---YDQAR-----------------SYYSKIASMKGYEVYGK-----FQIADSYYNE 627 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 Y A ++ + NY + + E+A + + L D + YP Sbjct: 628 KNYAKAGELYKAIYNNYGETFYGEQAYYKYITTLSLLGNTDAFEREKNNFLSVYPNSNLR 687 Query: 264 RYVETL 269 + L Sbjct: 688 TTISNL 693 >gi|95929063|ref|ZP_01311808.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684] gi|95134964|gb|EAT16618.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684] Length = 225 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 8/135 (5%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 T E+Y +A ++ ++ A F++ R +P A + A Q + GK Sbjct: 97 TTAQPSATEIYRQAFADYTQERYADAEHGFSEFLRLYPENPFAATACFRLAQSQQAQGKT 156 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 QQA S E ++ Y + Y S A +++ Q ++R++E Y Sbjct: 157 QQALSHFAEVVSHYSDDHKASEALY----SMAVLLKKTNQPQH----AQAALNRLIENYP 208 Query: 171 NSPYVKGARFYVTVG 185 +S K A + Sbjct: 209 DSAAAKKANAGLASL 223 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 14/121 (11%) Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 Y Q S + Y +P+ A F + ++Q A G+ Sbjct: 112 ADYTQERYADAEHGFSEFLRLYPENPFAATACFRL--AQSQQAQ------------GKTQ 157 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 A+ F V+++YSD A EA+ + A+ ++ + E YP A+ Sbjct: 158 QALSHFAEVVSHYSDDHKASEALYSMAVLLKKTNQPQHAQAALNRLIENYPDSAAAKKAN 217 Query: 268 T 268 Sbjct: 218 A 218 >gi|152996218|ref|YP_001341053.1| Tol-Pal system YbgF [Marinomonas sp. MWYL1] gi|150837142|gb|ABR71118.1| Tol-Pal system YbgF [Marinomonas sp. MWYL1] Length = 262 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 50/135 (37%), Gaps = 8/135 (5%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 ++ Y A ++++NF +A F++ +D+P + V+ GK + Sbjct: 136 PPTAQAQQAYNDAYNLIRQRNFDEAETAFSKFVKDYPDNSLTGNGYYWLGEVKLVQGKSK 195 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 +A I +P Y +G Q+ T Y+ ++ R+ N Sbjct: 196 EAIEAFSTVIQNFPGHSKEQDSLYKLGTVSDQL--------GDTAKAKSYLQDVIRRFPN 247 Query: 172 SPYVKGARFYVTVGR 186 S K A Y++ + Sbjct: 248 SKAAKLAAGYLSKIK 262 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 44/123 (35%), Gaps = 19/123 (15%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +IR QR S+ V+ Y ++ +++ + L Sbjct: 149 YNLIR-----QRNFDEAETAFSKFVKDYPDNSLTGNGYYWLGEVK--------------L 189 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +G+ AI F V+ N+ ++++ +L L +A+ + + R+P Sbjct: 190 VQGKSKEAIEAFSTVIQNFPGHSKEQDSLYKLGTVSDQLGDTAKAKSYLQDVIRRFPNSK 249 Query: 262 WAR 264 A+ Sbjct: 250 AAK 252 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 56/151 (37%), Gaps = 23/151 (15%) Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 P A+++ A+ + +A + +++ YP++ L G Y + Sbjct: 133 SLQPPTAQAQQA-YNDAYNLIRQRNFDEAETAFSKFVKDYPDNS-------LTGNGYYWL 184 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 +V Q +K ++ S +++ + + + + + +QL K Sbjct: 185 -GEVKLVQGKSKEAIEAFSTVIQNFPGHSKEQDSLYKLGTVSDQLGDT--------AKAK 235 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 Y+ Q V+ + +++ A+ A L + Sbjct: 236 SYL------QDVIRRFPNSKAAKLAAGYLSK 260 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 31/87 (35%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 D + Y + L + +A E F+ ++FP + SL V Sbjct: 165 SKFVKDYPDNSLTGNGYYWLGEVKLVQGKSKEAIEAFSTVIQNFPGHSKEQDSLYKLGTV 224 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNV 130 G +A S ++ I ++P SK Sbjct: 225 SDQLGDTAKAKSYLQDVIRRFPNSKAA 251 >gi|313205262|ref|YP_004043919.1| hypothetical protein [Paludibacter propionicigenes WB4] gi|312444578|gb|ADQ80934.1| Tetratricopeptide TPR_1 repeat-containing protein [Paludibacter propionicigenes WB4] Length = 1010 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 57/160 (35%), Gaps = 22/160 (13%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 ++ SA+V Y + E ITQYP+S+ D Y +G +Y M + Sbjct: 582 AMFQSAYVAGLQKNYSSKITKLESLITQYPKSEYTDDAMYEMGRAYLMMDNN-------- 633 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + + R++ S + A +EIG Y + AIP ++ Sbjct: 634 EKAIATYQRLLAAQPTSEMARKAA--------------LEIGMVYYNEKQNDRAIPAYKN 679 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 V+A Y + A A+ L Y+ + + Sbjct: 680 VIAKYPGTDEANTALESLQTLYIEANDVSSYLNYTKSLGH 719 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 12/126 (9%), Positives = 38/126 (30%), Gaps = 8/126 (6%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +++ A + ++N+S +P + ++ ++A + + Sbjct: 583 MFQSAYVAGLQKNYSSKITKLESLITQYPKSEYTDDAMYEMGRAYLMMDNNEKAIATYQR 642 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P S+ +GM Y ++ + ++ +Y + A Sbjct: 643 LLAAQPTSEMARKAALEIGMVYYN--------EKQNDRAIPAYKNVIAKYPGTDEANTAL 694 Query: 180 FYVTVG 185 + Sbjct: 695 ESLQTL 700 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 76/232 (32%), Gaps = 33/232 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y+ + + KA EYF+ R + + L A Y K A + Sbjct: 433 LYQLGTEAFTQNSLGKAIEYFSLSLRSSTTGKYSAECLYWRAESYYRTDKPDLAIRDLKA 492 Query: 120 YITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK- 176 + + + V YL+ +Y Q+ L + + E TNS V Sbjct: 493 FFNNSNSKSSANRVAANYLLAYAYFA--------QKNYPEALNWFLKYTEAETNSGAVTL 544 Query: 177 -GARFYVTVGR---NQLAAKEVE----------IGRYYLKRGEYVAA--------IPRFQ 214 A + L+ ++ Y + + YVA I + + Sbjct: 545 SDALNRIGDCYFYARNLSKAQLFYSKAVAASPNTADYAMFQSAYVAGLQKNYSSKITKLE 604 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 ++ Y +E+ ++AM + AY+ + ++A + P AR Sbjct: 605 SLITQYPKSEYTDDAMYEMGRAYLMMDNNEKAIATYQRLLAAQPTSEMARKA 656 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 45/152 (29%), Gaps = 23/152 (15%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++Y + + + ++++ A Y ++ + D + + L Y A Sbjct: 283 NDMYLLGMSYFQTKDYTNAVRYLSKVTTDK--DEMTENAYLHLGNSYIKLKDYTNARLAY 340 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E + + + ++ + A + + + + NS Y Sbjct: 341 EAALRTSFNKTVREEAMFNYALTSYEST-------SAFGESISAFEQFLTEFPNSKYTDE 393 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 A Y++ Y+ Y AA Sbjct: 394 AYDYLSSV--------------YMTTKNYDAA 411 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 31/84 (36%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +YE +L N KA + + P + +ARK+ L V Y+ + Sbjct: 611 PKSEYTDDAMYEMGRAYLMMDNNEKAIATYQRLLAAQPTSEMARKAALEIGMVYYNEKQN 670 Query: 111 QQAASLGEEYITQYPESKNVDYVY 134 +A + I +YP + + Sbjct: 671 DRAIPAYKNVIAKYPGTDEANTAL 694 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 60/171 (35%), Gaps = 18/171 (10%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ---------MIRDVPYD-QRA 154 Y Y +A + Y +P+ D YL+GMSY Q + V D Sbjct: 258 YRKRDYVKAIEHLKNYEKLFPQVLRND--MYLLGMSYFQTKDYTNAVRYLSKVTTDKDEM 315 Query: 155 TKLMLQYMSRI---VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-YLKRGEYVAAI 210 T+ ++ ++ YTN+ A + + Y + +I Sbjct: 316 TENAYLHLGNSYIKLKDYTNARLAYEAALRTSFNKTVREEAMFNYALTSYESTSAFGESI 375 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 F+ L + ++++ +EA L Y+ D A S+++ + P Sbjct: 376 SAFEQFLTEFPNSKYTDEAYDYLSSVYMTTKNYDAA--YQSILKIKTPNSK 424 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 71/227 (31%), Gaps = 25/227 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPF----AGVARKSLLMSAFVQYSAGKYQQAASL 116 Y A ++ A F + + + + Y+ Y Q Sbjct: 180 YYYAYTLYCLGSYKDALPDFLALEDNPAYRNIVSYYIVQI-------YYAQKDYDQLNDR 232 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER-------- 168 E + P++KN +Y + G + RD K + +++ Sbjct: 233 AERILRDNPDNKNNAEIYRIAGEIAYRK-RDYVKAIEHLKNYEKLFPQVLRNDMYLLGMS 291 Query: 169 YTNSPYVKGARFYVTVG---RNQLAAKE-VEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 Y + A Y++ ++++ + +G Y+K +Y A ++ L + Sbjct: 292 YFQTKDYTNAVRYLSKVTTDKDEMTENAYLHLGNSYIKLKDYTNARLAYEAALRTSFNKT 351 Query: 225 HAEEAMA-RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 EEAM + +Y + + E+ +P + + Sbjct: 352 VREEAMFNYALTSYESTSAFGESISAFEQFLTEFPNSKYTDEAYDYL 398 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 24/197 (12%), Positives = 55/197 (27%), Gaps = 25/197 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A ++ KA + P + A A A + Sbjct: 734 YLAAEKQYMNGSYDKAIIGLQAYLTGFCPGGKYCTIAQYYLADSYDRADDKANALKAYQA 793 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + ++ ++ + YDQ+ L Y ++ ++ AR Sbjct: 794 VLKIE-GNEFMEEAI--------IRCAGITYDQKDYSAALDYFKQLQTVAQSTEKKNVAR 844 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE-EAMARLVEAYV 238 + L +Y + ++++ + + EA+ +AY+ Sbjct: 845 LGILRCSYFL--------------NDYQTTVNIVNEIMSDSRSSAELKSEALYNRAKAYL 890 Query: 239 ALALMDEAREVVSLIQE 255 AL +A + + Sbjct: 891 ALKKDVDAAADLKSLAA 907 Score = 39.7 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 65/203 (32%), Gaps = 26/203 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVA-RKSLLMSAFVQYSAGKYQQAASLGE 118 Y A + ++N+ +A +F + + V +L + A +A Sbjct: 510 YLLAYAYFAQKNYPEALNWFLKYTEAETNSGAVTLSDALNRIGDCYFYARNLSKAQLFYS 569 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + P + DY + V Q+ + + ++ +Y S Y Sbjct: 570 KAVAASPNT--ADYAMF--------QSAYVAGLQKNYSSKITKLESLITQYPKSEYTDD- 618 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 A E+ GR YL AI +Q +LA +E A +A + Y Sbjct: 619 -----------AMYEM--GRAYLMMDNNEKAIATYQRLLAAQPTSEMARKAALEIGMVYY 665 Query: 239 ALALMDEAREVVSLIQERYPQGY 261 D A + +YP Sbjct: 666 NEKQNDRAIPAYKNVIAKYPGTD 688 >gi|254441081|ref|ZP_05054574.1| tol-pal system protein YbgF, putative [Octadecabacter antarcticus 307] gi|198251159|gb|EDY75474.1| tol-pal system protein YbgF, putative [Octadecabacter antarcticus 307] Length = 261 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 8/129 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++E + +A + +F A + + +P + VA + L+ G+ AA Sbjct: 138 EQEDFTRAQAAIASGDFRGAVDLLATFNETYPGSPVAADANLLRGQAYEQMGETTNAARA 197 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + PE +G S A + + + + + R+ +P V Sbjct: 198 YLAAFSGNPEGPVAPAALTKLGRSLAALGQQ--------RDACVTLGEVATRFPGAPEVG 249 Query: 177 GARFYVTVG 185 A+ + Sbjct: 250 EAQDVMATL 258 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 36/118 (30%), Gaps = 19/118 (16%) Query: 147 DVPYDQRA-----TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 D Q A + + ++ E Y SP A Q+ R Sbjct: 141 DFTRAQAAIASGDFRGAVDLLATFNETYPGSPVAADANLLRGQAYEQMGET-TNAAR--- 196 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y+AA + + A A+ +L + AL +A + + R+P Sbjct: 197 ---AYLAA-------FSGNPEGPVAPAALTKLGRSLAALGQQRDACVTLGEVATRFPG 244 >gi|332288803|ref|YP_004419655.1| tetratricopeptide repeat protein [Gallibacterium anatis UMN179] gi|330431699|gb|AEC16758.1| tetratricopeptide repeat protein [Gallibacterium anatis UMN179] Length = 390 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 74/196 (37%), Gaps = 34/196 (17%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 +D+ + Y++++ + A F+ +A + + + S + A +L A + Sbjct: 103 IDNNPNYSYEQKLLTRQQLAKDFMFVGFLDRAEKLYQKLSEE---PDYAENALHELANIY 159 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++ +A +GE Y +++N+ +S+ + DQ+ + ++ +++ Sbjct: 160 QRTKEWDKAIEVGERYRKLTQQTENI-------ALSHYYCEFALESDQQ--QQIMASLTK 210 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + N + + Y K+ Y AI + ++ + Sbjct: 211 ALIVSPNCVRAT-----------------LILAEQYAKQNNYEQAIKTLEQIVE--QNLA 251 Query: 225 HAEEAMARLVEAYVAL 240 + EA+ L+E Y L Sbjct: 252 YISEALPPLIEYYHHL 267 >gi|154150715|ref|YP_001404333.1| TPR repeat-containing protein [Candidatus Methanoregula boonei 6A8] gi|153999267|gb|ABS55690.1| TPR repeat-containing protein [Methanoregula boonei 6A8] Length = 4079 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 16/119 (13%), Positives = 42/119 (35%), Gaps = 22/119 (18%) Query: 61 YEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y+K ++++A + ++ + +P A + Y G+Y++A Sbjct: 1370 YQKGRALFDSGSYTEAIDAYDRALEVESSYPEAHYHK------GLALYELGRYEEALLSY 1423 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 ++ + P ++DY + G + ++ R + +Q + Y Sbjct: 1424 DQALESNP---HLDYALFHRGAALMKLER--------YREAVQAFDAALLLLP--KYAP 1469 Score = 45.1 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 25/174 (14%), Positives = 55/174 (31%), Gaps = 26/174 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y + + +A F+ A + ++ GKY +A S + Sbjct: 3410 YLVGRSYYALNTYDEAIAAFDRALDLQ---GEFAE-AWYYKGRTLFAMGKYGEAVSAYDS 3465 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK--- 176 + P+ D +Y GM+ ++ R + + + N Y+ Sbjct: 3466 TLVLRPKH---DEAFYHKGMALLKLQR--------AGDAVSAFDQALRLRPNFSYIWTGK 3514 Query: 177 -GARFYVTVGRNQLAAKEVEIG------RYYLKRGEYVAAIPRFQLVLANYSDA 223 A + ++ ++ I R Y + G ++ R+Q + N+ Sbjct: 3515 GMALAALDRHKDAISCYTKAIALDRKDSRAYYQAGLSYLSLGRYQDAIRNFEAT 3568 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 71/205 (34%), Gaps = 28/205 (13%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 Y + Y + + + +A F + P AF+ +Y QAA Sbjct: 174 EYAKAYYNMGISLYEIGRYDEALGAFEKAHDLDPSDPW---VWYYRAFILAKQERYAQAA 230 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 +++ PE ++ +V + G+S ++ R R +E+ +P Sbjct: 231 EAAGVFLSFEPEHADI-WV--IQGISLYRL--------RRLDEAADAFDRAIEQDPLAPD 279 Query: 175 VK----------GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 T ++ A + + Y RG+ + +++ +A++ A Sbjct: 280 AWLYKGFSLFDMERYEDATYALDKAAELSPQTTKIYYTRGKANQRLGKYREAVADFDRAL 339 Query: 225 HAE----EAMARLVEAYVALALMDE 245 AE +A+ + + L+ DE Sbjct: 340 AAEPENADALYSRGVSCIHLSRYDE 364 Score = 43.2 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 26/76 (34%), Gaps = 3/76 (3%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D +Y+K + + + + A + F + P ++L ++ + Sbjct: 784 DPDNPVTLYQKGIALAQRERYDDAIKTFERLLTLEPENA---QALYYLGIAYAGRQRFDE 840 Query: 113 AASLGEEYITQYPESK 128 A E + P++ Sbjct: 841 AIVAFERSLEIDPKNP 856 Score = 42.4 bits (99), Expect = 0.076, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 64/219 (29%), Gaps = 52/219 (23%) Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLG 117 Y K + L + +A F R+ + +R L G++ +A Sbjct: 1200 YNKGKMLLDLGKYQEALAAFDQALEREPAYTEVFYSRGVALS------KLGRFPEAIEAF 1253 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E ++ N YY G++ +++ R + L R + + Sbjct: 1254 ER--NLEKDTSNAP-GYYFKGIALSKLGR--------YQEALDAFDRALVYDPEN----- 1297 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARL 233 Y ++G + + RFQ +A + EA R Sbjct: 1298 -------------------ALVYFQKGRALDGLNRFQEAVAAFEKTLALKPRYSEARMRK 1338 Query: 234 VEAYVALALMDEA-REVVSLIQERYPQG--YWARYVETL 269 + L +A R+ I E P W + L Sbjct: 1339 GISLYNLGRYADAIRDFDRTIAEN-PHNFHAWYQKGRAL 1376 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 70/230 (30%), Gaps = 52/230 (22%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +YEK V ++ + A E F Q P + L + GK+ A + + Sbjct: 621 LYEKGVALMQLSRWKDAAEAFGQAVEQDPG---LIDAWLAFGTCNANLGKFPDAIAAFDR 677 Query: 120 YITQYPESKNVDYVYYLVGM-------------SYAQMIRDVPYDQRATK------LMLQ 160 I P++ + G+ + + + D P D+RA LQ Sbjct: 678 VIALSPKNTQ---AFIHKGIALVTTGKFEEAIAALNRALEDAPRDERAWYYKGMSLAALQ 734 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGR----NQLA--AKEVEIGRYY-------------- 200 V + V + N LA K++E Y Sbjct: 735 RFEEAVRSF---ERVLEINRRCSPAFFQKGNALAHLGKQLEAIISYDQALEIDPDNPVTL 791 Query: 201 LKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEA 246 ++G +A R+ + + +A+ L AY DEA Sbjct: 792 YQKGIALAQRERYDDAIKTFERLLTLEPENAQALYYLGIAYAGRQRFDEA 841 Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 71/220 (32%), Gaps = 36/220 (16%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 A+C + + + S + +Y + + + F +A + +N Sbjct: 3585 ALCGVSMFHEAITSFDKALSEQSDYPEAWLY-RGIAEANLEEFEEALDCYNHALAQNE-- 3641 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 A +LL + +A + E+ +T PES + +Y G ++ +D Sbjct: 3642 SYAT-ALLNKGRALIHLERTGEALAAIEKVLTIQPESAD---AFYYKGRAHLNRRQDDD- 3696 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 A Q A G ++G+Y A+ Sbjct: 3697 ------------------------AIDAFNRALAINRQFAEAHYYKGTALARKGQYEEAV 3732 Query: 211 PRFQLVLA---NYSDAEHAE-EAMARLVEAYVALALMDEA 246 F L +Y +A + + A+ L + ALA D+A Sbjct: 3733 AAFDAALRIKSDYPEAFYEKGRALFHLERSKEALAAYDQA 3772 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 68/210 (32%), Gaps = 40/210 (19%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 D + YEK L+ +A F D F + GK+ Sbjct: 2824 DDKKPEAQYEKGRALLELGEDEQAVTSFTRALDLDTSFGD----AAYYLGLALERVGKFT 2879 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + + + P+ + +Y G++ ++ RD +Q + + + Sbjct: 2880 DAITAYDRMVAARPDHSD---AWYHRGIASERLGRDND--------AVQAYEKARQIEPH 2928 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 + + + GR + + G++ AI F + L E + Sbjct: 2929 N---------LPLL--------FADGRAWARLGQFEDAIHLFDIALGKEPG---NGEILF 2968 Query: 232 RLVEAYVALALMDEAREVVSL----IQERY 257 +A AL DEA+E+ L + + Y Sbjct: 2969 EKAKALAALGRHDEAQEIFRLAFTQLTDNY 2998 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 58/205 (28%), Gaps = 42/205 (20%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVAR-KSLLMSAFVQYS 106 V D + + K F N +A ++ +P + +LL Sbjct: 2346 VLDPKAADAAFFKGEAFSLLGNDEEAIHAYDLALSLESAYPEGSFKKGLALLRL------ 2399 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y A + I P +Y G++ + ++ + ++ + + Sbjct: 2400 -KNYNGAIEAFDAAIQFVPGH---AQAHYHKGLALFALGKN--------EKAIRSFTHAL 2447 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 E + + L G Y Y A+ F +L + Sbjct: 2448 EHDPS-------------LSDAL----FHTGLAYAALSRYSPALSAFDKLLES---GPQN 2487 Query: 227 EEAMARLVEAYVALALMDEAREVVS 251 EA+ + L DEA V+ Sbjct: 2488 AEALFQKGRMLAKLGRPDEALAVLE 2512 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 58/162 (35%), Gaps = 14/162 (8%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K A FF L+G + ++ L + Y ++K + L+ +N++ A E F Sbjct: 2350 KAADAAFFKGEAFSLLGNDEEAIHAYDLALSLESAYPEGSFKKGLALLRLKNYNGAIEAF 2409 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + + P ++ ++ GK ++A + ++ + G++ Sbjct: 2410 DAAIQFVPGHA---QAHYHKGLALFALGKNEKAIRS---FTHALEHDPSLSDALFHTGLA 2463 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 YA + R P L +++E + + + Sbjct: 2464 YAALSRYSP--------ALSAFDKLLESGPQNAEALFQKGRM 2497 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 71/216 (32%), Gaps = 34/216 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y K ++ + +A F+ D+P ++ + + ++A + Sbjct: 3716 YYKGTALARKGQYEEAVAAFDAALRIKSDYP------EAFYEKGRALFHLERSKEALAAY 3769 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT---NSPY 174 ++ ++ P + G +Y + + ++ R +E + Y Sbjct: 3770 DQALSANPG---YAEAIFQKGRTYITL--------QNPDGAIRSFDRALEVNPSCFQAHY 3818 Query: 175 VKGARFYVTVGRN-QLAAKEVEIG------RYYLKRGEYVAAIPRFQLVLANYSDA---- 223 K Y + + + I Y RG AAI +++ + +Y A Sbjct: 3819 WKARTLYDEGSYDAAITEYDRAIAIKPDRPELYRDRGLAYAAIDQYREAIKSYDKALELD 3878 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 H +A + + L + +A E E+ P+ Sbjct: 3879 THGADAFSHKGSSLAELGMYRDALEAFEKAIEKDPE 3914 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 41/144 (28%), Gaps = 17/144 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D +++ ++ + + + +A F R L ++ KY + Sbjct: 1974 DPENPDALFQAGIVLARLEKYDEAIGLF---DRYLELGKENAGILYERGCAYFALQKYSE 2030 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A + + + G S A + + + R++ + Sbjct: 2031 AIASFDRALALDANHIG---ALVKKGQSRANL--------GQYEEAVTLFDRVITLDPEN 2079 Query: 173 PYVKGARFYVTVGRNQLAAKEVEI 196 A F + +LA E + Sbjct: 2080 ---VIAHFVMGTALARLARYEDAV 2100 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 51/184 (27%), Gaps = 36/184 (19%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A+ L + +A F+Q P VA Y A KY+ A + ++ Sbjct: 3074 RALAALNRND--EAVASFDQVLALEPADPVAS---FERGRALYYAAKYEHAVEALDTTLS 3128 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 P Y S A + R + R++ + Y Sbjct: 3129 SDPRHPG---ALYFRAASLAALERYA--------EAAESFERLLVYTPENADAW----YE 3173 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 LA + Y AI F VL +A+ + A L Sbjct: 3174 QGCV--LA-----------RLRHYDEAIAAFDHVLNL---VPEHFDALFQKARALDDLGK 3217 Query: 243 MDEA 246 EA Sbjct: 3218 YSEA 3221 >gi|71281931|ref|YP_268471.1| TPR domain-containing protein [Colwellia psychrerythraea 34H] gi|71147671|gb|AAZ28144.1| TPR domain protein [Colwellia psychrerythraea 34H] Length = 263 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 69/196 (35%), Gaps = 31/196 (15%) Query: 1 MSAVLGRAICIFEAWAYQL-------YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTD 53 +S VL R +++ ++ K A +A G S ++ Sbjct: 86 LSQVLERQRELYKEIDRRVNEVLKSTSKTASVTMSPVATISTAGNATSYSNNL------- 138 Query: 54 VRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + E Y+ A+ LK++ + +A F ++ FP + A + + ++ G+ Q Sbjct: 139 --TENETYDHALNLVLKDKRYQQAIVEFRAFNKSFPNSSYAPNAHYWLGQLLFNQGELAQ 196 Query: 113 AASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 A +E++ ++ +S + M V Q K + ++++ Y Sbjct: 197 AE---QEFLIVVNKHKDSTKRPDALLKLAM--------VAQKQNNAKKAISTYQQLIKEY 245 Query: 170 TNSPYVKGARFYVTVG 185 S K + + Sbjct: 246 PESTAAKLGKPRLASL 261 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 41/129 (31%), Gaps = 22/129 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +YQQA + +P S +Y +G Q Q + Sbjct: 153 KDKRYQQAIVEFRAFNKSFPNSSYAPNAHYWLGQLLFN--------QGELAQAEQEFLIV 204 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V ++ +S A + + + + K+ AI +Q ++ Y ++ Sbjct: 205 VNKHKDSTKRPDALLKLAM-----------VAQ---KQNNAKKAISTYQQLIKEYPESTA 250 Query: 226 AEEAMARLV 234 A+ RL Sbjct: 251 AKLGKPRLA 259 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 38/117 (32%), Gaps = 24/117 (20%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYV-TVGRNQ----LAAKEVEIGRYYLKRGEYV 207 + + + + + NS Y A +++ + NQ A +E I Sbjct: 155 KRYQQAIVEFRAFNKSFPNSSYAPNAHYWLGQLLFNQGELAQAEQEFLI----------- 203 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 V+ + D+ +A+ +L +A + + YP+ A+ Sbjct: 204 --------VVNKHKDSTKRPDALLKLAMVAQKQNNAKKAISTYQQLIKEYPESTAAK 252 >gi|86143443|ref|ZP_01061828.1| putative TPR-repeat protein [Leeuwenhoekiella blandensis MED217] gi|85829890|gb|EAQ48351.1| putative TPR-repeat protein [Leeuwenhoekiella blandensis MED217] Length = 1007 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 76/233 (32%), Gaps = 44/233 (18%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +YE ++ + + + +++ R+ P + A K+ L A + + + Sbjct: 605 PQSSYRDDALYELGNTYVATGDNERGIQAYDRLVREIPKSKFAAKAQLKKALIYDNTSRS 664 Query: 111 QQAASLGEEYITQYPESKNVDYV------YYL-VGMS----------YAQMIRDVPYDQR 153 QA +L + YP + Y+ G + D D Sbjct: 665 DQALNLFKRVAQDYPGTPEGVQAVASAKLIYIDKGQVDEYGRWANTLDYISVEDSELDDA 724 Query: 154 ATK------------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 A +Q + + Y N A +G+ Y Sbjct: 725 AFSSAEQQLVGSNNAQAIQNFEKYLREYPNGQRAMEA--------------HFYLGQLYF 770 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 + EY ++ V+ +E E+A+ARL + Y++ + +A V+ ++ Sbjct: 771 GQNEYAKTKSHYKYVIDK-ERSEFTEQALARLGQVYLSESNYADAVPVLKRLE 822 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 32/228 (14%), Positives = 67/228 (29%), Gaps = 52/228 (22%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR----------KSLLMSAFVQYSAGKY 110 Y + K++N+++A +YF + + + + + +Y Sbjct: 505 YNLGYAYFKKKNYNQATKYF---------SQFTQSGTDDNVRKMDAYMRLGDSHFIESEY 555 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A I P N DY + +SY + R+ ++ +S + Sbjct: 556 WPAMEAYNAAIAM-PGG-NKDYATFQKSISYGFVDRNAQK--------IEGLSNFANVFP 605 Query: 171 NSPYVKGA-------------RFYVTVGRNQL----------AAKEVEIGRYYLKRGEYV 207 S Y A ++L A +++ Y Sbjct: 606 QSSYRDDALYELGNTYVATGDNERGIQAYDRLVREIPKSKFAAKAQLKKALIYDNTSRSD 665 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 A+ F+ V +Y +A+A Y+ +DE + + Sbjct: 666 QALNLFKRVAQDYPGTPEGVQAVASAKLIYIDKGQVDEYGRWANTLDY 713 Score = 40.1 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 81/234 (34%), Gaps = 34/234 (14%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 ++S+ + + Y KA L K+ NF +A + P A +S L Sbjct: 192 EASQLFEEIEAEEGTREDLSYFKADLNFKQGNFEEAIQL---AKEQLPTANRLEQSELNK 248 Query: 101 A--FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 ++ G++ +A +EY + N DY Y +G +Y + Q Sbjct: 249 IIGESYFNLGQFDEALPYLKEYRGKRGRWSNTDY--YQLGYAYYK--------QGDYDSA 298 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-VEIGRYYLKRGEYVAAIPRFQLVL 217 + + + G+N +A + YLK G+ A+ F+ Sbjct: 299 IGEFN-----------------KIIDGKNSVAQNAYYHLADAYLKTGKKQEALNAFRNAY 341 Query: 218 A-NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 ++ + + +Y + A + + E+YP + ++TL+ Sbjct: 342 QMDFEPKIKEDSGLNYTKLSYEIGNAYEPAPQAIGNYLEQYPDTPERQQLQTLL 395 Score = 39.3 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 72/234 (30%), Gaps = 22/234 (9%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 V YQ+ + + + + ++ +A F + + ++L A +Y+ + Sbjct: 421 KVAYQKVAFYRGIELYNDGDYQEAIINFEKSLSEPRTPEFTARALYWKAESEYTINRIDD 480 Query: 113 AASLGEEYITQY-----PESKNVDY----VY-----YLVGMSYAQMIRDVPYDQRATKLM 158 A +++ PE N+ Y Y Y Y D + M Sbjct: 481 ALLTFKQFEQNSAARSLPEYDNLAYNLGYAYFKKKNYNQATKYFSQFTQSGTD-DNVRKM 539 Query: 159 LQYMSRIVERYTNSPY-----VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 YM + S Y A + G A + I ++ R I Sbjct: 540 DAYMRLGDSHFIESEYWPAMEAYNAAIAMPGGNKDYATFQKSISYGFVDRNAQK--IEGL 597 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 + + + ++A+ L YVA + + + P+ +A + Sbjct: 598 SNFANVFPQSSYRDDALYELGNTYVATGDNERGIQAYDRLVREIPKSKFAAKAQ 651 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 25/185 (13%), Positives = 47/185 (25%), Gaps = 25/185 (13%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + F +A Y + + Y G Y A + I Sbjct: 251 GESYFNLGQFDEALPYLK--EYRGKRGRWSNTDYYQLGYAYYKQGDYDSAIGEFNKIIDG 308 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 ++ YY + +Y + + + L + + + T Sbjct: 309 --KNSVAQNAYYHLADAYLKTGKK--------QEALNAFRNAYQMDFEPKIKEDSGLNYT 358 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 EIG Y A L Y D ++ L+++Y+ Sbjct: 359 KL-------SYEIG------NAYEPAPQAIGNYLEQYPDTPERQQLQTLLIDSYITSKNY 405 Query: 244 DEARE 248 + A E Sbjct: 406 EGAME 410 Score = 35.1 bits (80), Expect = 9.5, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 75/222 (33%), Gaps = 27/222 (12%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + Y+ + K+ ++ A FN+ VA+ + A GK Q+A Sbjct: 277 WSNTDYYQLGYAYYKQGDYDSAIGEFNKIIDGK--NSVAQNAYYHLADAYLKTGKKQEAL 334 Query: 115 SLGEEYITQYPES------KNVDYVY----YLVGMSYAQMIRDV-----PYDQRATKLML 159 + + Y ++ Y Y +G +Y + + Y + L Sbjct: 335 NA---FRNAYQMDFEPKIKEDSGLNYTKLSYEIGNAYEPAPQAIGNYLEQYPDTPERQQL 391 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY-----LKRGEYVAAIPRFQ 214 Q + +++ Y S +GA + RN + +Y G+Y AI F+ Sbjct: 392 QTL--LIDSYITSKNYEGAMELIENNRNFEDKVAYQKVAFYRGIELYNDGDYQEAIINFE 449 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 L+ E A+ E+ + +D+A ++ Sbjct: 450 KSLSEPRTPEFTARALYWKAESEYTINRIDDALLTFKQFEQN 491 >gi|71660285|ref|XP_821860.1| serine/threonine protein phosphatase type 5 [Trypanosoma cruzi strain CL Brener] gi|70887249|gb|EAO00009.1| serine/threonine protein phosphatase type 5, putative [Trypanosoma cruzi] Length = 472 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 41/151 (27%), Gaps = 27/151 (17%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +T + K +E + A E + + L AF Sbjct: 1 MTSAEEADRLKNKGNEAFQEGKWHHAIELYTEALALH----KTPVILCNRAFAYLKTELA 56 Query: 111 QQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 A + +E + P Y YY ++ + + K L+ +V+ Sbjct: 57 GAALTDADEALRLDPG-----YVKAYYRKASAHLYLGKH--------KEALKDFKTVVQL 103 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 AR + KEV R+ Sbjct: 104 IPGDK---DARNKLDFC-----EKEVRRIRF 126 >gi|40062541|gb|AAR37486.1| hypothetical protein MBMO_EBAC750-01B07.28 [uncultured marine bacterium 106] Length = 235 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 35/78 (44%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + IG +L +G A + L L Y + H +A+ L +A L +++ + + + Sbjct: 158 MAIGNGFLAQGHSKQAASHYGLFLREYPKSRHTPQALYYLGQAMKDLGEIEKQKILWKEL 217 Query: 254 QERYPQGYWARYVETLVK 271 YPQ A+ + ++ Sbjct: 218 IINYPQSSLAKRAKKRLR 235 Score = 47.0 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 42/120 (35%), Gaps = 8/120 (6%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ L+ N +A E+ + + L+ + G +QAAS ++ + Sbjct: 124 GLVSLQSGNPDQAVEHLQDILKAKKATKLKGDILMAIGNGFLAQGHSKQAASHYGLFLRE 183 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 YP+S++ Y +G D + ++ Y S K A+ + Sbjct: 184 YPKSRHTPQALYYLG--------QAMKDLGEIEKQKILWKELIINYPQSSLAKRAKKRLR 235 >gi|27382259|ref|NP_773788.1| hypothetical protein bll7148 [Bradyrhizobium japonicum USDA 110] gi|27355430|dbj|BAC52413.1| bll7148 [Bradyrhizobium japonicum USDA 110] Length = 398 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 34/133 (25%), Gaps = 22/133 (16%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 Y A + + +YP + Y +G SY Q + + Sbjct: 277 EFDLGIGYMQRKDYALAEQTMKNFAQKYPSDPLLGDAQYWLGESYFQR--------QQYR 328 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + +Y S A + L KE AA F V Sbjct: 329 DSAEAFLAVTTKYEKSAKAPDALLRLGQSLAALKEKE--------------AACAAFGEV 374 Query: 217 LANYSDAEHAEEA 229 Y A +A Sbjct: 375 GRKYPRASAGVKA 387 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 14/110 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 ++ L Q M ++Y + P + A++++ G Y +R +Y + Sbjct: 287 RKDYALAEQTMKNFAQKYPSDPLLGDAQYWL--------------GESYFQRQQYRDSAE 332 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 F V Y + A +A+ RL ++ AL + A + +YP+ Sbjct: 333 AFLAVTTKYEKSAKAPDALLRLGQSLAALKEKEAACAAFGEVGRKYPRAS 382 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 12/126 (9%), Positives = 42/126 (33%), Gaps = 14/126 (11%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 L ++ R+ ++ + +++ ++++ A + ++ +P + + + Sbjct: 265 LTTLPPSATPRDEFDLGIGYMQRKDYALAEQTMKNFAQKYPSDPLLGDAQYWLGESYFQR 324 Query: 108 GKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 +Y E ++ Y +S +G S A + + + Sbjct: 325 QQY---RDSAEAFLAVTTKYEKSAKAPDALLRLGQSLAAL--------KEKEAACAAFGE 373 Query: 165 IVERYT 170 + +Y Sbjct: 374 VGRKYP 379 >gi|332521272|ref|ZP_08397728.1| Tetratricopeptide TPR_1 repeat-containing protein [Lacinutrix algicola 5H-3-7-4] gi|332043000|gb|EGI79198.1| Tetratricopeptide TPR_1 repeat-containing protein [Lacinutrix algicola 5H-3-7-4] Length = 1005 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 72/219 (32%), Gaps = 34/219 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-RKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A + K ++++ A +YFN+ P + + L A + + +Y A + Sbjct: 504 YNLAYTYFKLKDYANATQYFNKFISKKPQDQIRLNDAYLRLADAHFVSSRYNDAIIAYNQ 563 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I DY Y+ +SY + + + ++ Y S A Sbjct: 564 AIEI--GKIEADYAYFQKAISYGYL--------GQANKKITELETFIDTYKASKLRDDAM 613 Query: 180 FYVTVGRNQLAAKEVEIGRY-----------------------YLKRGEYVAAIPRFQLV 216 + + + +KE + Y Y + A+ +F+ V Sbjct: 614 YALGNAYVKAGSKEKAMATYNNLTATYSTSPFVSNTLLRQGLVYYNNNQNQEALTKFKTV 673 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 ++ + A +A+A Y+ L ++ V + Sbjct: 674 AKDFPASAEANQAVATARLIYIDLGEVENYAAWVQTLDY 712 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 68/254 (26%), Gaps = 60/254 (23%) Query: 45 DVYLDSVTDVRY-QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLMSAF 102 D L D Y + + KA N++ A FN + + + A+ Sbjct: 449 DNSLKEPQDPNYVAKAAFWKAETDYNLTNYNDALNGFNTYKQTATSSLKETQNLDYNLAY 508 Query: 103 VQYSAGKYQQAASLGEEYITQYPESK---------------------------------- 128 + Y A ++I++ P+ + Sbjct: 509 TYFKLKDYANATQYFNKFISKKPQDQIRLNDAYLRLADAHFVSSRYNDAIIAYNQAIEIG 568 Query: 129 --NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 DY Y+ +SY + + + ++ Y S A Sbjct: 569 KIEADYAYFQKAISYGYL--------GQANKKITELETFIDTYKASKLRDDAM------- 613 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +G Y+K G A+ + + A YS + + R Y EA Sbjct: 614 -------YALGNAYVKAGSKEKAMATYNNLTATYSTSPFVSNTLLRQGLVYYNNNQNQEA 666 Query: 247 REVVSLIQERYPQG 260 + + +P Sbjct: 667 LTKFKTVAKDFPAS 680 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 70/230 (30%), Gaps = 40/230 (17%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 V ++ ++ + +N+ A Y N+ + ++ F+ Sbjct: 127 DKVDESALARKEREKFYFNNGYTAFTTKNYDDAKTYLNKVESSQEYGS---QAKYYIGFM 183 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ-YM 162 Y Y +A + ++ D Y +SY Q D+ + K + Sbjct: 184 AYQGDDYDKANTYFDQ---------VKDQEKYQEKLSYYQA--DLNFKLGKFKEAIALAS 232 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI----------GRY-----------YL 201 +R+ + V + L E I G++ Y Sbjct: 233 ARLDDSSP--EEVSELSKIIGESYFNLEQYEEAIPFLQAYKGKRGKWNNTDYYQLGYAYY 290 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 K+ +Y AI F ++ D A+ A L E+Y+ L EA Sbjct: 291 KQKDYKKAISEFNKIIGG--DNSVAQNAYYHLGESYINLNKKQEALNAFR 338 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 24/221 (10%), Positives = 69/221 (31%), Gaps = 41/221 (18%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 +D+ + + + + L+++++ A + + F + + Y Sbjct: 784 VVDASQSEFTEEALLRLSQITLEKKDWENALPILKRLETEANFPQNSLFAQSNLMQANYQ 843 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA--TKLMLQYMSR 164 KY A + E +S++ + V D + + ++ Sbjct: 844 LKKYNDAVAYAE------------------KVLSHSTLDNKVKSDAQVIIARSAIKT--- 882 Query: 165 IVERYTNSPYVKGARFYVTVGRNQL-------AAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 A+ + + +L A + K G Y ++ Q ++ Sbjct: 883 ----------GNEAKAKLAYEQVELTATGVTAAEALYYNAYFKNKAGAYQNSLKATQRLV 932 Query: 218 ANYSDAEHA-EEAMARLVEAYVALALMDEAREVVSLIQERY 257 ++S + + + + + AL +A ++ I + + Sbjct: 933 KDFSSYRYYGAKGLIVMAKNQYALNDAFQATYILESIPKNF 973 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 28/210 (13%), Positives = 56/210 (26%), Gaps = 31/210 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++KA+ + +K + + + ++ AG ++A + Sbjct: 576 YFQKAISYGYLGQANKKITELETFIDTYKASKLRDDAMYALGNAYVKAGSKEKAMATYNN 635 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 Y S V G+ Y ++ + L + + + S A Sbjct: 636 LTATYSTSPFVSNTLLRQGLVYYNNNQN--------QEALTKFKTVAKDFPASAEANQAV 687 Query: 180 FYVTVGRNQLAAKEVEIG-----RYYLKRGE------YVAA------------IPRFQLV 216 + L E Y Y AA I +F+ Sbjct: 688 ATARLIYIDLGEVENYAAWVQTLDYVEVTNADLDHASYQAAEKQYLDDNTNNAIKQFEKY 747 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEA 246 + + HA +A L + Y +A Sbjct: 748 NREFKNGLHATQAHFYLAQLYFKENENQKA 777 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 24/184 (13%), Positives = 51/184 (27%), Gaps = 27/184 (14%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + + + +A + + Y Y++A S + I Sbjct: 251 GESYFNLEQYEEAIPFLQAYKGKR--GKWNNTDYYQLGYAYYKQKDYKKAISEFNKIIG- 307 Query: 124 YPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 +V YY +G SY + + + L + + + A ++ Sbjct: 308 --GDNSVAQNAYYHLGESYINLNKK--------QEALNAFRNASQMDYDLKIQEDA--WL 355 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 + Y Y + L Y + + EE L+++Y+ Sbjct: 356 NYAKIS-----------YDIGNPYQSVPQVLSGYLEQYPETTYKEEVENLLIDSYITSKN 404 Query: 243 MDEA 246 EA Sbjct: 405 YKEA 408 >gi|307747976|gb|ADN91246.1| Putative lipoprotein [Campylobacter jejuni subsp. jejuni M1] Length = 215 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 59/157 (37%), Gaps = 9/157 (5%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 D E Y++ + L++++ KA +++N + + + +L++ A Sbjct: 20 TKNDEGLYNLSASEWYKQIIKDLQDKDLEKADDHYNGMASEHVADPLLETTLIILAQAHM 79 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +Y+ A +EY ++ S+N DY+ YL + +Q + + Sbjct: 80 DEEEYKLAEFYLDEYNKKFGNSRNADYIRYLKIKAKFDAFAVPNRNQALMLESQKEIDTF 139 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 ++ Y + Y + +T + +YL Sbjct: 140 LKDYPYTEYEPLVQTMLTK---------FNLAVFYLN 167 >gi|300822969|ref|ZP_07103104.1| tol-pal system protein YbgF [Escherichia coli MS 119-7] gi|300524510|gb|EFK45579.1| tol-pal system protein YbgF [Escherichia coli MS 119-7] Length = 190 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F +++P Sbjct: 43 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 102 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 103 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 154 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 155 QDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 190 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ Sbjct: 69 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 117 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 118 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 174 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 175 PGTDGAKQAQK 185 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 87 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 138 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V +G+ A +Q V++ Y + A++A Sbjct: 139 KSPKAADAMFKVGVIMQ--------------DKGDTAKAKAVYQQVISKYPGTDGAKQAQ 184 Query: 231 ARL 233 RL Sbjct: 185 KRL 187 >gi|188997334|ref|YP_001931585.1| PDZ/DHR/GLGF domain protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188932401|gb|ACD67031.1| PDZ/DHR/GLGF domain protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 668 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 71/225 (31%), Gaps = 46/225 (20%) Query: 64 AVLFLKEQNFSKAYEYFN---QCSRDFP--------FAGVARK---SLLMSAFVQYSAGK 109 L +++ KA + S++ P ++ K +L + Y G+ Sbjct: 100 GKAHLAIKDYDKAIHLLEIAAKESKENPSEPLWQGFYSRFVPKKSEALSLLGSAYYLKGE 159 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 YQ+A E I N+ ++ + MSY ++ + ++ R +E Sbjct: 160 YQKAVEALNESIKL---DPNLSDPFFFLAMSYGKL--------KEYGKAVEAAKRAIELD 208 Query: 170 TNSP--YVK-----GARFYVTVGRNQLAA----------KEVEIGRYYLKRGEYVAAIPR 212 +P Y + L +++ Y ++ Y A+ Sbjct: 209 PKAPTYYAVLGLIYKDQKKYKEAEENLKKSIELDPKSIVSYLKLADLYYEKESYKEAVNT 268 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256 VL EA L+ Y+A+ D+A I+ Sbjct: 269 LTKVLEINP---SNMEANYSLIYTYMAMGQFDKAIESANKAIKHN 310 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 3/68 (4%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 KA F +E F KA E + + PF K+ A Y++A Y+ Sbjct: 586 KAEAFTEEGKFEKAIEEYQKALELSPFYPNLYKA---LALSYGQIKDYKKAIKNMNIYLE 642 Query: 123 QYPESKNV 130 YP++ ++ Sbjct: 643 LYPDAPDI 650 >gi|323967345|gb|EGB62766.1| tol-pal system protein YbgF [Escherichia coli M863] gi|327254431|gb|EGE66053.1| tol-pal system protein YbgF [Escherichia coli STEC_7v] Length = 263 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 19/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F +++P Sbjct: 116 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 ++ T +++ +Y + K A+ + Sbjct: 228 QEKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM 263 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLN----------- 190 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 191 ---YNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQEKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 P A+ + Sbjct: 248 PGTDGAKQAQK 258 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I YP+S + Y +G + Y + +V+ Y Sbjct: 160 DDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 211 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A F V V ++G+ A +Q V++ Y + A++A Sbjct: 212 KSPKAADAMFKVGVIMQ--------------EKGDTAKAKAVYQQVISKYPGTDGAKQAQ 257 Query: 231 ARL 233 RL Sbjct: 258 KRL 260 >gi|317052770|ref|YP_004113886.1| tetratricopeptide repeat-containing protein [Desulfurispirillum indicum S5] gi|316947854|gb|ADU67330.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfurispirillum indicum S5] Length = 1018 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 84/258 (32%), Gaps = 63/258 (24%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS------AGKYQQAASL 116 +A + E N +A + R+ P + + ++ + ++ +++ A ++ Sbjct: 212 QAYSYFGEGNDLQALDELLYIIREHPESPLVEEATFLLGDAYHNIPQEPPGVQFRDAITV 271 Query: 117 GEEYITQYPESKNVDYVYYLVGMSY------------AQMIRDV---------------- 148 E+ I YP S+ V Y +G SY +MI Sbjct: 272 YEKAIDLYPGSRFVPRAIYGIGQSYEALGNPAAAKFHYEMIPSPIVNEYIGPALLAVARL 331 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK-RGEY- 206 +Q + + ++ M +++ Y + A +T A Y+ + + EY Sbjct: 332 ELEQDSVRGAIEAMETLLQ-YDEDHWRMEALRQLTRL-EFKADHYQRSADYFTRLQNEYS 389 Query: 207 ------------------------VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 AA Q V+ Y + A +A L + + Sbjct: 390 ELFTFDPQLLLEAAQSYHQVGELRKAAWN-LQRVINVYPHFDGAAKAFLELATIHHTVGN 448 Query: 243 MDEAREVVSLIQERYPQG 260 D A+ +S + +YP Sbjct: 449 TDLAQMFISELTGKYPDT 466 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 64/182 (35%), Gaps = 25/182 (13%) Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 L A+ + G QA I ++PES V+ +L+G +Y + ++ P Q + Sbjct: 210 LRQAYSYFGEGNDLQALDELLYIIREHPESPLVEEATFLLGDAYHNIPQEPPGVQ--FRD 267 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA-------AKEV---------------E 195 + + ++ Y S +V A + + L E+ Sbjct: 268 AITVYEKAIDLYPGSRFVPRAIYGIGQSYEALGNPAAAKFHYEMIPSPIVNEYIGPALLA 327 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + R L++ AI + +L Y + EA+ +L + + + +Q Sbjct: 328 VARLELEQDSVRGAIEAMETLLQ-YDEDHWRMEALRQLTRLEFKADHYQRSADYFTRLQN 386 Query: 256 RY 257 Y Sbjct: 387 EY 388 >gi|283850790|ref|ZP_06368076.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B] gi|283573713|gb|EFC21687.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B] Length = 999 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 14/102 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Y + + ++Y A + G YY RG+Y A +Q + Sbjct: 450 EAKGYFNVLTKKYP-----ADANVPLIN---------FYWGEYYFDRGDYKKAAEEYQGL 495 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 + + ++++ E L + V L EA ++ I +R+P Sbjct: 496 IEKFPESKYVREGAMGLAKTLVKLGRYKEAAQIADYIGKRWP 537 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 51/160 (31%), Gaps = 23/160 (14%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI-T 122 + ++ KA E + FP + R+ + A G+Y++AA + + YI Sbjct: 476 GEYYFDRGDYKKAAEEYQGLIEKFPESKYVREGAMGLAKTLVKLGRYKEAAQIAD-YIGK 534 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 ++P YY+ ++ D+ Y K + Sbjct: 535 RWPR-------YYVEFPGILRIDGDIAYRNGDVKKARDDYLTFYNMTPKVKDADLVLARL 587 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 G Y K G AA+ + + + +Y + Sbjct: 588 --------------GDIYAKLGNRPAAVDFYNMAVKDYPN 613 Score = 42.8 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 4/81 (4%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 V D E++ + + + + RD P + +A + + A Q Y Sbjct: 629 VHDQPTISEMFS----LFDKPQYGSPDDIYEGIIRDHPNSPLAPLAQIKLAMWQLYRQNY 684 Query: 111 QQAASLGEEYITQYPESKNVD 131 ++ ++ +YP+++ Sbjct: 685 PESLKSAARFLERYPKNELAP 705 >gi|78186500|ref|YP_374543.1| hypothetical protein Plut_0617 [Chlorobium luteolum DSM 273] gi|78166402|gb|ABB23500.1| conserved hypothetical protein [Chlorobium luteolum DSM 273] Length = 267 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 53/162 (32%), Gaps = 8/162 (4%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K A I ++ ++ + +++ + + F+ A E F Sbjct: 113 KAAAVIPPAVPGSAGATSPDSAAATAAAPPSPSPKSDSDLFNEGAAMFGKDRFNDARESF 172 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + +D+P + + A ++ Y +A + I +Y +S + S Sbjct: 173 SALIKDYPKSPRVGDAQFFIAESWFAEKAYDKAILDYQTVIAKYTKSPKRPMAIFKQARS 232 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 ++I D +V Y ++P K AR + Sbjct: 233 -FELIGD-------AANAKTRYRDLVNVYPSAPEAKLARQKL 266 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 14/108 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + S +++ Y SP V A+ I + Y AI +Q V Sbjct: 167 DARESFSALIKDYPKSPRVGDAQ--------------FFIAESWFAEKAYDKAILDYQTV 212 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 +A Y+ + A+ + ++ + A+ + YP A+ Sbjct: 213 IAKYTKSPKRPMAIFKQARSFELIGDAANAKTRYRDLVNVYPSAPEAK 260 >gi|114319402|ref|YP_741085.1| hypothetical protein Mlg_0240 [Alkalilimnicola ehrlichii MLHE-1] gi|114225796|gb|ABI55595.1| conserved hypothetical protein [Alkalilimnicola ehrlichii MLHE-1] Length = 278 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 46/146 (31%), Gaps = 8/146 (5%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 + TD R + + Y+ A + E F +A + F D P + + A Sbjct: 139 DETPTTPADTDARSEADRYQAAFQLITEGRFRRAGQAFEALLDDHPDGEFSANARYWLAE 198 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y+ ++ +A E + +P+S +G + R + + Sbjct: 199 TWYAEREFDRAGEEFERLLADHPDSNKAADAKLKLGFVRFEQER--------YDEARELL 250 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQ 188 + + A + + R + Sbjct: 251 QATRNEHRGTTAASLAEQRLELMRER 276 >gi|284040356|ref|YP_003390286.1| hypothetical protein Slin_5521 [Spirosoma linguale DSM 74] gi|283819649|gb|ADB41487.1| Tetratricopeptide repeat protein [Spirosoma linguale DSM 74] Length = 607 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 7/126 (5%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y L L + +A N+ + +P + + L + A GK +A ++ Sbjct: 484 YADIDLMLFQNKTEEAVLELNKMLKTYPEHSLVDEILWLRANTFLKQGKNAEALEDLKKI 543 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + YP D ++ G Y ++D + ++ +++ +Y S Y AR Sbjct: 544 VASYPNDILGDDAQFMQGKIYEDRLKD-------KQAAMEAYQKVLTQYPGSIYGAEARK 596 Query: 181 YVTVGR 186 R Sbjct: 597 RFRALR 602 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 23/127 (18%) Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 K ++A + + YPE VD + +L ++ + ++ L+ + +IV Sbjct: 493 QNKTEEAVLELNKMLKTYPEHSLVDEILWLRANTFLKQGKNA--------EALEDLKKIV 544 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-GEYVAAIPRFQLVLANYSDAEH 225 Y N A+ G+ Y R + AA+ +Q VL Y + + Sbjct: 545 ASYPNDILGDDAQ--------------FMQGKIYEDRLKDKQAAMEAYQKVLTQYPGSIY 590 Query: 226 AEEAMAR 232 EA R Sbjct: 591 GAEARKR 597 >gi|307128659|ref|YP_003880689.1| hypothetical protein SMCARI_189 [Candidatus Sulcia muelleri CARI] gi|306483121|gb|ADM89991.1| conserved hypothetical protein [Candidatus Sulcia muelleri CARI] Length = 320 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 40/87 (45%) Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + +GM Y+ D +DQ T ++ ++ E Y NS +K + + ++ K+ Sbjct: 150 LFYIGMCYSFKYNDFNFDQEDTYKLIYFLLTFKELYPNSRRIKKVDYNLYKALFKIKQKK 209 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANY 220 + I YY Y +++ F+ ++ + Sbjct: 210 LTIAYYYFNNKNYKSSLIIFKYLIKYF 236 >gi|294507043|ref|YP_003571101.1| Conserved hypothetical protein, containing tetratricopeptide repeat [Salinibacter ruber M8] gi|294343371|emb|CBH24149.1| Conserved hypothetical protein, containing tetratricopeptide repeat [Salinibacter ruber M8] Length = 1003 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 49/144 (34%), Gaps = 17/144 (11%) Query: 96 SLLMSAFVQYSA-GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 + A + A G+ A + + + P+ Y + ++ Q Sbjct: 586 AQYELANALFRAAGRPDSAQTWFRRVLDETPDHPVAPQALYGLAQAH--------RAQGD 637 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGR------NQLAAKEVEIGRYY--LKRGEY 206 T R+++ + ++P K AR + + ++ + R Y + G + Sbjct: 638 TAAGDDAYRRLIDEHPDTPIAKRAREQLGLATTDEDPERTVSRADSAYARAYEAWRSGRH 697 Query: 207 VAAIPRFQLVLANYSDAEHAEEAM 230 AA+ F V Y + A A+ Sbjct: 698 DAALRAFLKVADAYRETSVAPRAL 721 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 1/77 (1%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A E+ + G +A F+ VL D A +A+ L +A+ A + Sbjct: 586 AQYELANALF-RAAGRPDSAQTWFRRVLDETPDHPVAPQALYGLAQAHRAQGDTAAGDDA 644 Query: 250 VSLIQERYPQGYWARYV 266 + + +P A+ Sbjct: 645 YRRLIDEHPDTPIAKRA 661 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 20/102 (19%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG--RYYLKRGEYVAA 209 Q + +Q + ++ + NS +V A + IG RYY + YV A Sbjct: 103 QSSFGEAIQKSAAVLREHPNSEWVDDAL--------------LLIGRSRYYQQ--NYVGA 146 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 + +F+ +A DAE EA RL + V EA + + Sbjct: 147 VQKFREAIAL--DAEREGEARFRLAQTLVVAGRYREAADALR 186 >gi|258405238|ref|YP_003197980.1| tol-pal system protein YbgF [Desulfohalobium retbaense DSM 5692] gi|257797465|gb|ACV68402.1| tol-pal system protein YbgF [Desulfohalobium retbaense DSM 5692] Length = 292 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 59/152 (38%), Gaps = 22/152 (14%) Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + P + +++ A Q+ YQ A +L +I + P+S V Y+ G SY Q Sbjct: 160 EAEAPQTFDSPQAMYDEALAQFRKRNYQNAQALWARFIDENPKSDLVPNAYFWQGESYYQ 219 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 Q + + ++ER+ S +++ + + L+ +Y K Sbjct: 220 S-------QNYAR-AVLAYQEVIERFQES-----SKYRPALLKQGLS--------FY-KL 257 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 G+ Q V+ + D+ A A A L + Sbjct: 258 GKTKPGRLLLQRVIDSAPDSPEAGRAEAFLEQ 289 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 51/135 (37%), Gaps = 8/135 (5%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 ++ + +Y++A+ +++N+ A + + + P + + + Y Sbjct: 159 AEAEAPQTFDSPQAMYDEALAQFRKRNYQNAQALWARFIDENPKSDLVPNAYFWQGESYY 218 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + Y +A +E I ++ ES G+S+ ++ TK + R+ Sbjct: 219 QSQNYARAVLAYQEVIERFQESSKYRPALLKQGLSFYKL--------GKTKPGRLLLQRV 270 Query: 166 VERYTNSPYVKGARF 180 ++ +SP A Sbjct: 271 IDSAPDSPEAGRAEA 285 Score = 42.0 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 48/147 (32%), Gaps = 22/147 (14%) Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 P++ + Y ++ + R + +R ++ S V A F+ Sbjct: 164 PQTFDSPQAMYDEALAQFRK--------RNYQNAQALWARFIDENPKSDLVPNAYFWQ-- 213 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 G Y + Y A+ +Q V+ + ++ A+ + ++ L Sbjct: 214 ------------GESYYQSQNYARAVLAYQEVIERFQESSKYRPALLKQGLSFYKLGKTK 261 Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271 R ++ + + P A E ++ Sbjct: 262 PGRLLLQRVIDSAPDSPEAGRAEAFLE 288 >gi|308273438|emb|CBX30040.1| hypothetical protein N47_D28490 [uncultured Desulfobacterium sp.] Length = 655 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 84/271 (30%), Gaps = 50/271 (18%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAY 77 + K + + L + D + V D + ++ KA Q +++A Sbjct: 1 MKKCIKLLIIPVLFALLACIPKAPVADFKVPDVKVDDTRGKALFSKAENLFSTQKYNRAL 60 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV---- 133 E +N+ FP + +LL + + G +A I +PES V Sbjct: 61 EAYNEYIVKFPESDNIPSALLRVGNIYDNLGDNNKARITYLRLINNHPESIYVSDAKLKV 120 Query: 134 ---YYLVGM-----SYAQMIRDVPYDQ-------------RATKLMLQYMSRIVERYTN- 171 Y+ G+ +Y+ I D ++ L S + + N Sbjct: 121 LEDYFKQGLFEDVINYSSNIFSENPDNLSGNYLSKAYTLVGDAQIALSQPSDALVSFFNA 180 Query: 172 -SPYVKGARF----YVTVGRNQLAAKEVE------------------IGRYYLKRGEYVA 208 S + + +QL ++ IG Y + +Y Sbjct: 181 GSRNTENGNEIIDTKLNNAFSQLEDNDINFLIESTKDNNLKGYLLYRIGVRYYETQKYKE 240 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 A F+ ++ E+ +EA L + Y Sbjct: 241 AETVFKDLIKQIPGHENVKEAKIYLQKIYKN 271 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 50/152 (32%), Gaps = 26/152 (17%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 K+L A +S KY +A EYI ++PES N+ VG Y + + Sbjct: 41 KALFSKAENLFSTQKYNRALEAYNEYIVKFPESDNIPSALLRVGNIYDNLGDN------- 93 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 R++ + S YV A+ V Y K+G + I Sbjct: 94 -NKARITYLRLINNHPESIYVSDAKLKVLED--------------YFKQGLFEDVINYSS 138 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 + + D L +AY + A Sbjct: 139 NIFSENPDNLSG----NYLSKAYTLVGDAQIA 166 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 9/67 (13%), Positives = 27/67 (40%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 +Y A+ + + + ++++ A+ R+ Y L ++AR + +P+ Sbjct: 51 FSTQKYNRALEAYNEYIVKFPESDNIPSALLRVGNIYDNLGDNNKARITYLRLINNHPES 110 Query: 261 YWARYVE 267 + + Sbjct: 111 IYVSDAK 117 Score = 40.5 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 47/137 (34%), Gaps = 18/137 (13%) Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 G + ++ Q+ + L+ + + ++ S + A + Sbjct: 39 RGKALFSKAENLFSTQKYNR-ALEAYNEYIVKFPESDNIPSALLR--------------V 83 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 G Y G+ A + ++ N+ ++ + +A +++E Y L ++ S I Sbjct: 84 GNIYDNLGDNNKARITYLRLINNHPESIYVSDAKLKVLEDYFKQGLFEDVINYSSNIFSE 143 Query: 257 YPQG---YWARYVETLV 270 P + TLV Sbjct: 144 NPDNLSGNYLSKAYTLV 160 >gi|315453239|ref|YP_004073509.1| paralysed flagellum protein, PflA [Helicobacter felis ATCC 49179] gi|315132291|emb|CBY82919.1| paralysed flagellum protein, PflA [Helicobacter felis ATCC 49179] Length = 790 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 40/125 (32%), Gaps = 9/125 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS-AGKYQQAASLGEE 119 Y + + EQ++ A + +P + L + +GE Sbjct: 184 YLQVKKLMGEQSYLAALKAIGNIFETYPKTLFRKDLYLYEMIALDKLNKRQDLLLQIGER 243 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 ++ YP V +V YL G +Y ++ K R + Y S Y ++ Sbjct: 244 WLKLYPADPKVPHVLYLTGTAYDRI--------NHAKQAQNQFQRAIIEYPGSRYAPLSQ 295 Query: 180 FYVTV 184 + Sbjct: 296 MRLAE 300 >gi|254417406|ref|ZP_05031148.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196175841|gb|EDX70863.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 250 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 29/199 (14%), Positives = 63/199 (31%), Gaps = 36/199 (18%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 L + + +A F + + A GK +A + EE I + Sbjct: 70 GNTLLAQNKWDEAVAVFQDLIAR---SPKTVDGYVKLAQALIEQGKLDEAMPIVEELIQR 126 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 +P++ ++ + L+ +S + + ++ + ++ + A + Sbjct: 127 HPQNTDIPFSVGLI-LSNINRLDTL----------IESYQTLSQQSPD-----KAILRLN 170 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-NYSDAEHAEEAMARLVEAYVALAL 242 + + + + AAI +Q + N +A L +A Sbjct: 171 LANSWMIQ------------ENWQAAIDEYQEAIRLNIKK----PQAYWYLGDALRQKGQ 214 Query: 243 MDEAREVVSLIQERYPQGY 261 +DEA V RYP Sbjct: 215 LDEALSVWREAIVRYPNDQ 233 >gi|77920563|ref|YP_358378.1| TPR domain-containing protein [Pelobacter carbinolicus DSM 2380] gi|77546646|gb|ABA90208.1| TPR domain protein [Pelobacter carbinolicus DSM 2380] Length = 266 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 18/149 (12%), Positives = 52/149 (34%), Gaps = 9/149 (6%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQCSRDFPFAGVARK 95 ++ V VY +AV +++ +++++ + + + P +A Sbjct: 123 SSATGNTAPVVQLPKAGAAQPETVYLQAVDAIRKQKHYAEGRKQLEEFLQKNPGHSLAPN 182 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + +Y++A E+ I +Y + Y G+++ Q+ Sbjct: 183 AAYWIGESYAGEKEYEKAILQFEDVIQKYGDHPKAAAAYLKQGLTFDQLGDR-------- 234 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTV 184 + + ++V+ + S A+ + Sbjct: 235 QSARAILEKLVKSFPLSGEAGIAKERLKA 263 Score = 38.6 bits (89), Expect = 0.92, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 42/130 (32%), Gaps = 14/130 (10%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 D Q+ + + +++ A ++ IG Y Sbjct: 147 YLQAVDAIRKQKHYAEGRKQLEEFLQKNPGHSLAPNAAYW--------------IGESYA 192 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 EY AI +F+ V+ Y D A A + + L AR ++ + + +P Sbjct: 193 GEKEYEKAILQFEDVIQKYGDHPKAAAAYLKQGLTFDQLGDRQSARAILEKLVKSFPLSG 252 Query: 262 WARYVETLVK 271 A + +K Sbjct: 253 EAGIAKERLK 262 >gi|15835449|ref|NP_297208.1| hypothetical protein TC0835 [Chlamydia muridarum Nigg] gi|270285630|ref|ZP_06195024.1| hypothetical protein CmurN_04308 [Chlamydia muridarum Nigg] gi|270289639|ref|ZP_06195941.1| hypothetical protein CmurW_04358 [Chlamydia muridarum Weiss] gi|301337026|ref|ZP_07225228.1| hypothetical protein CmurM_04310 [Chlamydia muridarum MopnTet14] gi|7190863|gb|AAF39635.1| conserved hypothetical protein [Chlamydia muridarum Nigg] Length = 318 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 54/161 (33%), Gaps = 14/161 (8%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS--LLMSA 101 ++ S +Y K L ++ +S+A + + S FP ++ K+ L+ Sbjct: 158 DEIVTASSDVDLKADALYSKGALLFAQKEYSEAIKTLKKVSLQFPSHSLSPKAFSLIAKI 217 Query: 102 FVQ------YSAGKYQQAASLGEEYITQYPESK-NVDYVYYLVGMS--YAQMIRDVPYDQ 152 + Y+ Q A + Q+P N + Y+ M YA + Sbjct: 218 YCLQALQEPYNEQYLQDARANAAALRKQHPNHPSNSEVANYIHRMCEAYASCLYSTGRFY 277 Query: 153 RATKLMLQ---YMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 + Y S +E + + YV + Q++ Sbjct: 278 EKKRKASSAKMYYSIALESFPETSYVAKCNKRLERLSKQIS 318 Score = 42.0 bits (98), Expect = 0.088, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 51/131 (38%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++ +Y +A ++ Q+P + L+ Y PY+++ + + Sbjct: 182 FAQKEYSEAIKTLKKVSLQFPSHSLSPKAFSLIAKIYCLQALQEPYNEQYLQDARANAAA 241 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + +++ N P Y+ A+ GR+Y K+ + +A + + L ++ + Sbjct: 242 LRKQHPNHPSNSEVANYIHRMCEAYASCLYSTGRFYEKKRKASSAKMYYSIALESFPETS 301 Query: 225 HAEEAMARLVE 235 + + RL Sbjct: 302 YVAKCNKRLER 312 Score = 37.8 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 71/233 (30%), Gaps = 39/233 (16%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 T +EK + + + F +A F + FP + K+ ++ Sbjct: 34 PKKYTPKYSPELYFEKGDHYFQAKKFKQALLCFGMITHHFPEHALRPKAQFLTGICYLEM 93 Query: 108 GKYQQAASLGEEYITQYPESKNVDY------VYYLVGMSYAQ-------MIRDVPYDQRA 154 G A +Y + +Y + Y + S+A + P +A Sbjct: 94 GHPDLADKALTQYQEL----SDTEYSEQLFSIKYSIAQSFANGKRKNIVALEGFPKLLKA 149 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 L+ IV ++ A + A KE Y AI + Sbjct: 150 DTDALRIFDEIVTASSDVDLKADALYSKGAL--LFAQKE------------YSEAIKTLK 195 Query: 215 LVLANYSDAEHAEEAMARLVEAY--------VALALMDEAREVVSLIQERYPQ 259 V + + +A + + + Y + +AR + +++++P Sbjct: 196 KVSLQFPSHSLSPKAFSLIAKIYCLQALQEPYNEQYLQDARANAAALRKQHPN 248 >gi|323697458|ref|ZP_08109370.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio sp. ND132] gi|323457390|gb|EGB13255.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio desulfuricans ND132] Length = 1110 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 44/103 (42%), Gaps = 14/103 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Y + ++Y + + G Y+ ++G+Y A +FQ + Sbjct: 558 EARAYFKILQDKYPDDDNIPSIS--------------YYWGEYWYRKGDYKKAADQFQQL 603 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + Y + + A++A L ++ L +D+A ++V I +R+P Sbjct: 604 IQTYPEHQLAKQAAYYLADSLDRLGYLDQAYQIVDYIDKRWPD 646 Score = 50.1 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 80/275 (29%), Gaps = 69/275 (25%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + + D Y + ++ ++ KA + F Q + +P +A+++ A Sbjct: 564 KILQDKYPDDDNIPSISYYWGEYWYRKGDYKKAADQFQQLIQTYPEHQLAKQAAYYLADS 623 Query: 104 QYSAGKYQQAASLGE--------------EYIT------------------------QYP 125 G QA + + E++ P Sbjct: 624 LDRLGYLDQAYQIVDYIDKRWPDYYMENMEFLRLAGGVEMQLKKWDPAKNHYFTYYNLNP 683 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV- 184 E+ D V +G Y + +Q+ Q + V+ + + A+ + Sbjct: 684 EADGADVVLARIGDIYLR------KNQKDA--AKQVYEKAVKDFPDKEGGLIAKMRLAEE 735 Query: 185 -GRNQLAAKEVEIGRYYLKRGEYVAAIPR---------FQLVLANYSDAEHAEEAMARLV 234 + A E+ V R + +++ + D+ A A +L Sbjct: 736 GIYDDPAMNEM------------VDVFNRPYNLNPKRVYTEIVSQHPDSPLAPIAQLKLA 783 Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 + EA + E+YP A TL Sbjct: 784 MWHAFHKQYPEALTAAQDLIEKYPDSPLADKARTL 818 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 69/203 (33%), Gaps = 45/203 (22%) Query: 69 KEQNFSKAYEYFNQCSRDFP-----------FAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + NF +A YF +P + Y G Y++AA Sbjct: 552 QVGNFPEARAYFKILQDKYPDDDNIPSISYYWGEY-----------WYRKGDYKKAADQF 600 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 ++ I YPE + Y + S ++ Q + I +R+ + Y Sbjct: 601 QQLIQTYPEHQLAKQAAYYLADSLDRL--------GYLDQAYQIVDYIDKRWPD--YYME 650 Query: 178 ARFYVTVGRNQLAAK-EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 + R LA E+++ ++ A + +A+ A+ +AR+ + Sbjct: 651 ---NMEFLR--LAGGVEMQL-------KKWDPAKNHYFTYYNLNPEADGADVVLARIGDI 698 Query: 237 YVALALMDEAREVVSLIQERYPQ 259 Y+ D A++V + +P Sbjct: 699 YLRKNQKDAAKQVYEKAVKDFPD 721 >gi|294645888|ref|ZP_06723564.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a] gi|292638768|gb|EFF57110.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a] Length = 383 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 75/267 (28%), Gaps = 55/267 (20%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 +C + D T +Y++ +E+N++ A + P A Sbjct: 9 ICAAICCTPIIGFAQTGDKFTST---DNLYKEGKELFQERNYAAALPALKAFVKQKPAAS 65 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--------- 142 + + + M Y + L +Y+ +YP++ + +Y L+ Y Sbjct: 66 LLQDAEYMLVSSAYELKDKNR-IELLRKYLDRYPDTPYANRIYALLASCYFYEGKYDEAL 124 Query: 143 --------QMIRDVPYDQ------------RATKLMLQYMSRIVERYTNSPYVKGARFYV 182 ++ + D + + + Y K +Y+ Sbjct: 125 ALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYL 182 Query: 183 TVGRNQLAAKE--------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + R I Y + Y A Q L+ Y + Sbjct: 183 SYIRYTQKRYSEALKGFLPLQDDSKYKALVPYYIAEIYTQLKNYDKAQIVAQNYLSAYPN 242 Query: 223 AEHAEEAMARLVEAYVALALMDEAREV 249 EHA E L +AY +A E Sbjct: 243 NEHAAEMYRILGDAYYHFGQYHQAVEA 269 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 28/190 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A +LK N +A +F + P A+ ++++Y+ +Y +A + + Sbjct: 145 YQLATCYLKTDNLREAAIWFETLRANSP--KYAKDCDYYLSYIRYTQKRYSEAL---KGF 199 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +SK V Y + Y Q+ + + Y N+ + Sbjct: 200 LPLQDDSKYKALVPYYIAEIYTQL--------KNYDKAQIVAQNYLSAYPNNEHAAEMYR 251 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + G Y G+Y A+ F L + +A+ L +Y Sbjct: 252 IL--------------GDAYYHFGQYHQAVEAFNNYLNK-DRSAPRRDALYMLGLSYYQT 296 Query: 241 ALMDEAREVV 250 + +A E + Sbjct: 297 KVYSKAAETL 306 >gi|254361240|ref|ZP_04977383.1| lipopolysaccharide N-acetylglucosaminyltransferase [Mannheimia haemolytica PHL213] gi|261492537|ref|ZP_05989090.1| lipopolysaccharide N-acetylglucosaminyltransferase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495210|ref|ZP_05991672.1| lipopolysaccharide N-acetylglucosaminyltransferase [Mannheimia haemolytica serotype A2 str. OVINE] gi|153092736|gb|EDN73779.1| lipopolysaccharide N-acetylglucosaminyltransferase [Mannheimia haemolytica PHL213] gi|261309135|gb|EEY10376.1| lipopolysaccharide N-acetylglucosaminyltransferase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311696|gb|EEY12846.1| lipopolysaccharide N-acetylglucosaminyltransferase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 398 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 77/179 (43%), Gaps = 33/179 (18%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A F+ + +A Y+ + FA + S L + ++++A ++ E+ + Sbjct: 122 AKDFMVAGFYDRAENYYISLVDEPEFAKYS-LSQLAVIY--QKTREWKKAINVTEKRLRI 178 Query: 124 YPESKNVDYVYYLVGMSYA--QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P++ + +S+ + + V +D +A ++ +++ +E Y S Sbjct: 179 EPDADKIP-------LSHFYCEYAQGVKFDDKAAF--IESLNKALEYYPQSTRAS----- 224 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + +G +YL+ GEY+ A+ F+ +L D + E + R+ ++Y+AL Sbjct: 225 ------------IILGDFYLEEGEYLRALSYFEQILVQDPD--YISEVLGRIKQSYMAL 269 >gi|153951092|ref|YP_001397810.1| putative lipoprotein [Campylobacter jejuni subsp. doylei 269.97] gi|152938538|gb|ABS43279.1| putative lipoprotein [Campylobacter jejuni subsp. doylei 269.97] Length = 215 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 70/179 (39%), Gaps = 18/179 (10%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L +F SI F ++ +Y S ++ Y++ + L++++ KA +++N Sbjct: 7 LLVFLSI---FFNACSTKNDEGLYNLSASEW------YKQIIKDLQDKDLEKADDHYNGM 57 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + + + +L++ A +Y+ A +EY ++ S+N DY+ YL + Sbjct: 58 ASEHVADPLLETTLIILAQAHMDEEEYKLAEFYLDEYNKKFGNSRNTDYIRYLKIKAKFD 117 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 +Q + + ++ Y + Y + +T + +YL Sbjct: 118 AFAVPNRNQALMLESQKEIDTFLKDYPYTEYEPLVQTMLTK---------FNLAVFYLN 167 >gi|149921884|ref|ZP_01910328.1| peptidase C1A, papain [Plesiocystis pacifica SIR-1] gi|149817237|gb|EDM76714.1| peptidase C1A, papain [Plesiocystis pacifica SIR-1] Length = 650 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 31/90 (34%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + ++++ A +++A F P + +L ++ Y Sbjct: 511 EPDQDPSDLFDAAYDLFGAGKYAEAKAEFAAWKAQNPTSPDVPYALYFMGVAEHQLDNYW 570 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + E+ + + + YVYY G SY Sbjct: 571 DSLLYFAEFADHHSDHDWLPYVYYWAGSSY 600 Score = 42.0 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 26/50 (52%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 L +A+ + AGKY +A + + Q P S +V Y Y +G++ Q+ Sbjct: 519 LFDAAYDLFGAGKYAEAKAEFAAWKAQNPTSPDVPYALYFMGVAEHQLDN 568 >gi|302339692|ref|YP_003804898.1| hypotheticalprotein [Spirochaeta smaragdinae DSM 11293] gi|301636877|gb|ADK82304.1| TPR repeat-containing protein [Spirochaeta smaragdinae DSM 11293] Length = 962 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 53/140 (37%), Gaps = 9/140 (6%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S+ ++ +A ++ ++ A + + + R +P + + A + Y GK Sbjct: 26 SLAAQDEASALFREAETRFRKGDYLFALQRYEELIRQYPVSEYVADAQFRRAVILYRTGK 85 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 ++A SL E +Y ++ Y+ + G++ + R + ++ + Sbjct: 86 AEEALSLFERVEKRYASTRFRRYIPFWKGVALFTLDR--------FESAASALATYLASS 137 Query: 170 TNSPYVKGARFYVTVGRNQL 189 + A Y+ + +L Sbjct: 138 PD-QLQAEAGRYLALSYQKL 156 Score = 42.4 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 60/186 (32%), Gaps = 14/186 (7%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 +YE A + N +A + Q + F + A +L + + +G+Y++A Sbjct: 651 ADDALYEYAQMMQNNGNDEEAIRSYYQLWQQFKSSPYAGDALYNRGELLFLSGQYRKAGE 710 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 Y T++P+ VD + ++ + A + ++++ + S + Sbjct: 711 AFYFYRTRFPKGALVDASLHYGALA--------ARKEAAPFQAVLLWEKLIDEHPKSAFY 762 Query: 176 KGARFYVTVGRNQLAAKEVEIG------RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 A Q I +Y + A + + E A Sbjct: 763 PEALQGCAELYRQAGEYRKSIAMYTKLLDFYPDIAKKANAEREIETLGKMLQGTGSREAA 822 Query: 230 MARLVE 235 + +E Sbjct: 823 LQVTIE 828 Score = 42.4 bits (99), Expect = 0.073, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 48/137 (35%), Gaps = 23/137 (16%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + G Y A EE I QYP S+ V + + + + L R Sbjct: 44 FRKGDYLFALQRYEELIRQYPVSEYVADAQFRRAVILYRT--------GKAEEALSLFER 95 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + +RY ++ + R Y+ + + + L R + +A LA+ D + Sbjct: 96 VEKRYASTRF----RRYIPFWKG--------VALFTLDR--FESAASALATYLASSPD-Q 140 Query: 225 HAEEAMARLVEAYVALA 241 EA L +Y L Sbjct: 141 LQAEAGRYLALSYQKLG 157 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 76/217 (35%), Gaps = 21/217 (9%) Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 +A + + + P + ++L A + AG+Y+++ ++ + + YP+ Sbjct: 744 QAVLLWEKLIDEHPKSAFYPEALQGCAELYRQAGEYRKSIAMYTKLLDFYPDIAKKANAE 803 Query: 135 YLV----------GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 + G A + + + TK ++ M + Y + Y + ++ Sbjct: 804 REIETLGKMLQGTGSREAALQVTIEQESTGTKKGVEAMVELGRLYYD-RYDRQEEKAKSL 862 Query: 185 GRNQLAAKEVE---IGRYYLKRGEYVAAIPRFQLVLANYSDAEH-------AEEAMARLV 234 +A K+ Y GE A + + ++ DA + ++ R Sbjct: 863 LEKVVAEKDRFPAPAAEAYYLLGEMAAEKGEAKKAVEHFLDAAALGGEGDTSARSLYRAA 922 Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 E D A+ +V I+ +P W L++ Sbjct: 923 EVAADAGDHDLAQTMVRQIERSFPDSEWTLRGRELLE 959 Score = 39.3 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 85/238 (35%), Gaps = 35/238 (14%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 VY D+ R Y ++ A F + SR + A K L M A Sbjct: 569 VYTDNPDHELSARSRYLSGWALYTLGSYKDAALAFGEYSRQMSGSE-AEKGLFMYAKSYA 627 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +AG +A+S +E ++ S D Y YAQM+++ D + ++ ++ Sbjct: 628 AAGDVGRASSGFQE-LSGKKSSAYADDALY----EYAQMMQNNGND----EEAIRSYYQL 678 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR-YYLKRG------------EYVAAIPR 212 +++ +SPY A + L+ + + G +Y R Y A R Sbjct: 679 WQQFKSSPYAGDALYNRGELL-FLSGQYRKAGEAFYFYRTRFPKGALVDASLHYGALAAR 737 Query: 213 -----FQLV------LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 FQ V + + + EA+ E Y ++ + + + + YP Sbjct: 738 KEAAPFQAVLLWEKLIDEHPKSAFYPEALQGCAELYRQAGEYRKSIAMYTKLLDFYPD 795 Score = 38.9 bits (90), Expect = 0.70, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 33/67 (49%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 ++G+Y+ A+ R++ ++ Y +E+ +A R +EA + +++RY Sbjct: 44 FRKGDYLFALQRYEELIRQYPVSEYVADAQFRRAVILYRTGKAEEALSLFERVEKRYAST 103 Query: 261 YWARYVE 267 + RY+ Sbjct: 104 RFRRYIP 110 Score = 35.1 bits (80), Expect = 9.4, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 67/208 (32%), Gaps = 25/208 (12%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D+ Y + +S+A ++F D P ++ +S +S + Y+ G Y+ Sbjct: 540 DITPYARFYA-GWAAYRTGAYSRAVDFFRAVYTDNPDHELSARSRYLSGWALYTLGSYKD 598 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 AA EY Q S+ + ++ SYA + + +S Sbjct: 599 AALAFGEYSRQMSGSE-AEKGLFMYAKSYAAA--------GDVGRASSGFQELSGKK-SS 648 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 Y A + E I YY + + + +A +A+ Sbjct: 649 AYADDALYEYAQMMQNNGNDEEAIRSYY--------------QLWQQFKSSPYAGDALYN 694 Query: 233 LVEAYVALALMDEAREVVSLIQERYPQG 260 E +A E + R+P+G Sbjct: 695 RGELLFLSGQYRKAGEAFYFYRTRFPKG 722 >gi|163745827|ref|ZP_02153186.1| hypothetical protein OIHEL45_09583 [Oceanibulbus indolifex HEL-45] gi|161380572|gb|EDQ04982.1| hypothetical protein OIHEL45_09583 [Oceanibulbus indolifex HEL-45] Length = 295 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 51/147 (34%), Gaps = 14/147 (9%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G S ++ ++ +E+A L +F A + F S+ +P +A ++ Sbjct: 152 GASTSGSIITPINEAELAVSEKTDFERAQGALASGDFRSAADLFATFSQTYPGGPLAAEA 211 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 L G ++AA ++ + PE + +G S + Sbjct: 212 ELRRGEALTGLGDNREAARA---FLAAFSADPEGPVAPQSLFELGRSLGTL--------E 260 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARF 180 T+ +S + R+ +P V A Sbjct: 261 QTQEACVTLSEVAVRFPGAPQVSQAEA 287 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 33/118 (27%), Gaps = 19/118 (16%) Query: 147 DVPYDQRA-----TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 D Q A + + + Y P A L E R Sbjct: 175 DFERAQGALASGDFRSAADLFATFSQTYPGGPLAAEAELRRGEALTGLGDNR-EAAR--- 230 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 ++AA + + A +++ L + L EA +S + R+P Sbjct: 231 ---AFLAA-------FSADPEGPVAPQSLFELGRSLGTLEQTQEACVTLSEVAVRFPG 278 >gi|260565804|ref|ZP_05836287.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M] gi|260151177|gb|EEW86272.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M] Length = 151 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + S+ +Y+ A +L ++ A F + + +P + ++ Sbjct: 15 NDAVASLPTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESL 74 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G+Y +AA+L + YP+SK + +GM+ +M + ++ Sbjct: 75 YGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH--------DVACATFAQ 126 Query: 165 IVERYTN 171 I +RY Sbjct: 127 IPQRYPK 133 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SL +A+ +G Y+ A + E++ +YP + +G S R Sbjct: 29 SLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYP------- 81 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y +S F + + ++ +V + Sbjct: 82 -EAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATF 124 Score = 35.5 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K V+RY P ARF++ +G Y A Sbjct: 41 GDYKAAEAGFREHVKRYPADPMTAEARFWLGESL--------------YGQGRYPEAATL 86 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F +Y D++ A E M +L A + D A + I +RYP+ Sbjct: 87 FIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYPK 133 Score = 35.1 bits (80), Expect = 9.6, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 23/68 (33%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + YL G+Y AA F+ + Y EA L E+ EA + Sbjct: 31 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 90 Query: 254 QERYPQGY 261 Q YP Sbjct: 91 QRDYPDSK 98 >gi|254448725|ref|ZP_05062183.1| conserved hypothetical protein [gamma proteobacterium HTCC5015] gi|198261733|gb|EDY86020.1| conserved hypothetical protein [gamma proteobacterium HTCC5015] Length = 426 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 7/126 (5%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 +++ +A P ++ + + A Y + +Y++ A L + ++P+ Sbjct: 306 YMENGFAPEAVSLAEHALEKHPTMEMSDQLEWLLAKTYYESLQYKKVAKLLNGFHKRHPK 365 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 S+ + Y LV + + + + DQ + IV+ Y P A+ Y+ V Sbjct: 366 SELIPDAYMLVAVMF---VDRLDNDQ----KAQPILKYIVKTYPEHPQAAKAQQYLKVVE 418 Query: 187 NQLAAK 192 AAK Sbjct: 419 ASTAAK 424 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 61/186 (32%), Gaps = 38/186 (20%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFP-----------------FAGVARKSLLMSAFVQYSA 107 F++E+N+ A +D P + Sbjct: 250 ERFIQEENYEAAMGELTVLIKDHPDDVALRKKQANLVRHIDTSHYYETPGRSLIRWYMEN 309 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G +A SL E + ++P + D + +L+ +Y + ++ K + + ++ + Sbjct: 310 GFAPEAVSLAEHALEKHPTMEMSDQLEWLLAKTYYESLQ--------YKKVAKLLNGFHK 361 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 R+ S + A Y+ V + + + A P + ++ Y + A Sbjct: 362 RHPKSELIPDA--YMLVAV-------MFV----DRLDNDQKAQPILKYIVKTYPEHPQAA 408 Query: 228 EAMARL 233 +A L Sbjct: 409 KAQQYL 414 >gi|170288929|ref|YP_001739167.1| TPR repeat-containing protein [Thermotoga sp. RQ2] gi|170176432|gb|ACB09484.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga sp. RQ2] Length = 357 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 86/239 (35%), Gaps = 41/239 (17%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 LD + E+ K L +++ + ++ ++ P ++ Y+ Sbjct: 124 LDIDENYAPAYEL--KGSLLVEQGKIEEGIKFLDKAVEIDP---WLVQAYASLGEAYYNL 178 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G Y++A E + P K Y+++ +Y +M R L ++ + R++E Sbjct: 179 GDYEKAIHYWERELEYNPSDKIT---YFMITEAYHEMNRK--------DLAVKALERLLE 227 Query: 168 RYTNS-----------------PYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAA 209 ++ + + + + E+E R LK G Y Sbjct: 228 IDPDNIPALYQLSQLYRELGSEEKAREMEEKIMNCKPK-YPTELEPWARVMLKHGRYKEV 286 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + + ++ + + A LV YV L +D+ARE++ I + +W Y + Sbjct: 287 VEELEKIVES---SPLNTLARLLLVVPYVKLGQIDKAREILDDIGQ---SNFWYYYGKK 339 >gi|87311428|ref|ZP_01093548.1| hypothetical protein DSM3645_25332 [Blastopirellula marina DSM 3645] gi|87285840|gb|EAQ77754.1| hypothetical protein DSM3645_25332 [Blastopirellula marina DSM 3645] Length = 984 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 83/287 (28%), Gaps = 85/287 (29%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ + ++ ++F+ A + + + P ++ A Y + A + E Sbjct: 69 LFYRGEALIQLEDFADARKSYQDFLQRVPTHDNRTQAEFRVAECYYLTHDLEAAQTQFET 128 Query: 120 YITQYPESKNVDYVY-YL--VGMSY--AQMIRDVPYDQRATKLML----QYMSRIVERYT 170 +IT +P+ + YL + ++ M + +A L + + Sbjct: 129 FITAHPDHALYAHALPYLGEIALADQDYDMAEQLFRKAKAAAPSLAMQGEAELGLARTLR 188 Query: 171 NS--------PYVKGARFYVTVGRN----------QLAAK-------------------- 192 +S Y + +T + +L Sbjct: 189 DSGQLHAARTAYRAALKQELTEAHDAKFELGVLEYRLGEHRVAVEHLTEVAQAGDRHSDI 248 Query: 193 -EVEIGRYYLKRGEYVAAIPRFQLV----------------------------------- 216 ++ I + Y + ++ A R Q + Sbjct: 249 AKLWIAKAYYEVRDWPQAEQRLQELAQEEKLSQYRDEIDYLSARIRLEQGETSEGLTQLE 308 Query: 217 --LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 LAN+ + +EA+ L EA V +D+A + YPQ Sbjct: 309 QLLANHPASPWCDEALFYLAEAAVVTGDLDKATTTAKRLIVEYPQRE 355 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 22/157 (14%) Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 QY+ ++ A + ++ YP+ + + G + Q+ + Sbjct: 38 SQYARKDWEAAIVAFDRFLYDYPDHSLTGALLFYRGEALIQLEDFAD--------ARKSY 89 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 ++R A E + Y + AA +F+ + + D Sbjct: 90 QDFLQRVPTHDNRTQA--------------EFRVAECYYLTHDLEAAQTQFETFITAHPD 135 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 A+ L E +A D A ++ + P Sbjct: 136 HALYAHALPYLGEIALADQDYDMAEQLFRKAKAAAPS 172 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 11/153 (7%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 E+Y A +++ A F++ D+P + L + A Sbjct: 29 AAELYAVAASQYARKDWEAAIVAFDRFLYDYPDHSLTGALLFYRGEALIQLEDFADARKS 88 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 ++++ + P N + V Y + +D A + + + + Sbjct: 89 YQDFLQRVPTHDNRTQAEFRVAECYY-----LTHDLEAAQTQ---FETFITAHPDHALYA 140 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 A Y+ LA ++ ++ L R AA Sbjct: 141 HALPYLGEI--ALADQDYDMAEQ-LFRKAKAAA 170 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 69/207 (33%), Gaps = 32/207 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-------RKSLLMSAFVQYSAGKYQQAASL 116 A + FS+A + FN+ +A R++ L G + +A L Sbjct: 778 AESLFHQHKFSEASKLFNEVEALTRGRELAWNSTVALRRAQLA---AH--LGDWDEALRL 832 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 E +P+ + + YL G A+ + R+++ Sbjct: 833 AELAAVSHPDFEQRFELDYLRGRCLARQANFAG--------ARRAYQRVID--------- 875 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 + A + IG Y + Y +AI + V A Y ++ ++ + Sbjct: 876 ---SRLGGASETAAMAQWMIGETYFHQKNYQSAIQAYSRVAALYDFPRWKAGSLLQIGKC 932 Query: 237 YVALALMDEAREVVSLIQERYPQGYWA 263 Y D+A+ + YP+ ++A Sbjct: 933 YEISRQWDKAQTYYDEVSAGYPETFFA 959 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 27/73 (36%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A + L++ S+ Q + P + ++L A G +A + + Sbjct: 288 YLSARIRLEQGETSEGLTQLEQLLANHPASPWCDEALFYLAEAAVVTGDLDKATTTAKRL 347 Query: 121 ITQYPESKNVDYV 133 I +YP+ + Sbjct: 348 IVEYPQREATPQA 360 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 37/132 (28%), Gaps = 14/132 (10%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ-CSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y + ++ NF+ A + + + A + M + YQ A Sbjct: 851 YLRGRCLARQANFAGARRAYQRVIDSRLGGASETAAMAQWMIGETYFHQKNYQSAIQAYS 910 Query: 119 EYITQY--PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 Y P K +G Y R Y + Y + + Sbjct: 911 RVAALYDFPRWKAGS--LLQIGKCYEIS--------RQWDKAQTYYDEVSAGYPETFFAG 960 Query: 177 GARFYVTVGRNQ 188 A+ ++V R + Sbjct: 961 EAQQRLSVVRQR 972 >gi|332305766|ref|YP_004433617.1| tol-pal system protein YbgF [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173095|gb|AEE22349.1| tol-pal system protein YbgF [Glaciecola agarilytica 4H-3-7+YE-5] Length = 250 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 45/128 (35%), Gaps = 15/128 (11%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 +Y + + + D + + ++ Y NS Y A +++ Sbjct: 131 AYDKAVNLILKD-KLYDDAIPEFQSFLQNYPNSSYASNAHYWLGQLL------------- 176 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + ++ AA +F ++ + D+ +AM +L + + A ++ + YP Sbjct: 177 -FNKQDWAAAANQFDTLITQFPDSSKRADAMLKLGICEQERSNIARAEQLWKKVVAEYPN 235 Query: 260 GYWARYVE 267 + E Sbjct: 236 SSARKLAE 243 Score = 50.1 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 52/131 (39%), Gaps = 9/131 (6%) Query: 57 QREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + + Y+KAV LK++ + A F +++P + A + + ++ + AA+ Sbjct: 128 EDQAYDKAVNLILKDKLYDDAIPEFQSFLQNYPNSSYASNAHYWLGQLLFNKQDWAAAAN 187 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + ITQ+P+S +G+ ++ Q ++V Y NS Sbjct: 188 QFDTLITQFPDSSKRADAMLKLGIC--------EQERSNIARAEQLWKKVVAEYPNSSAR 239 Query: 176 KGARFYVTVGR 186 K A + + Sbjct: 240 KLAEIKLNAVK 250 >gi|119383440|ref|YP_914496.1| hypothetical protein Pden_0688 [Paracoccus denitrificans PD1222] gi|119373207|gb|ABL68800.1| conserved hypothetical protein [Paracoccus denitrificans PD1222] Length = 309 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 10/124 (8%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA-ASLGEE 119 +++A L + +F +A E F + + ++L + SAG + A + E Sbjct: 167 FDRAREVLGQGDFRRAAELFAAIAETHVGGPLTAEALFLRGTALDSAGDLEGAGVAWLES 226 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P L+G+S A + + Y+ I+ R+ ++P A Sbjct: 227 FAA-NPNGPQAADA--LLGLSRAMSAK------AGPQEGCFYLQEIIARFPSAPQAAEAE 277 Query: 180 FYVT 183 + Sbjct: 278 RRIA 281 >gi|320167667|gb|EFW44566.1| type 5 protein serine/threonine phosphatase isoform [Capsaspora owczarzaki ATCC 30864] Length = 490 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 19/135 (14%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKY 110 D + ++ ++ K+ + A E ++ P A AF A Y Sbjct: 18 ADQKQADKLKDEGNAAFKDGKWQLAIEKYSAAIDLNPTLAPY----FANRAFANIKAENY 73 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + + I +S+ V YY + + R K L+ + +V+ Sbjct: 74 GYAIADATKAIAL--DSQFVK-AYYRRATANMALGR--------FKDSLKDLQAVVKVAP 122 Query: 171 NSPYVKGARFYVTVG 185 N A+ + Sbjct: 123 NDK---DAQTKMREC 134 >gi|182680531|ref|YP_001834677.1| tol-pal system protein YbgF [Beijerinckia indica subsp. indica ATCC 9039] gi|182636414|gb|ACB97188.1| tol-pal system protein YbgF [Beijerinckia indica subsp. indica ATCC 9039] Length = 395 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 50/139 (35%), Gaps = 29/139 (20%) Query: 124 YPESKNVDYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 P ++ D YL Q+ + + + + + + S A +Y+ Sbjct: 269 NPTKEDYDLALGYLR--------------QKEYEAAEKSFTAFLAKNSKSRLTPDAIYYL 314 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 G Y +RG A ++ + +Y+++ A EAM RL ++ AL Sbjct: 315 --------------GETYYQRGRQREAAEQYLKISTHYANSNRAPEAMLRLGQSLNALGA 360 Query: 243 MDEAREVVSLIQERYPQGY 261 ++A I +YP Sbjct: 361 KEQACATFGEIDRKYPNAS 379 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 33/101 (32%), Gaps = 8/101 (7%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A +Y+ A ++ + +S+ Y +G +Y Q R + Sbjct: 276 DLALGYLRQKEYEAAEKSFTAFLAKNSKSRLTPDAIYYLGETYYQRGRQ--------REA 327 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + +I Y NS A + N L AKE + Sbjct: 328 AEQYLKISTHYANSNRAPEAMLRLGQSLNALGAKEQACATF 368 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 15/130 (11%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 +E Y+ A+ +L+++ + A + F + + ++ Y G+ ++A Sbjct: 270 PTKEDYDLALGYLRQKEYEAAEKSFTAFLAKNSKSRLTPDAIYYLGETYYQRGRQREA-- 327 Query: 116 LGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN- 171 E+Y+ Y S +G S + A + I +Y N Sbjct: 328 -AEQYLKISTHYANSNRAPEAMLRLGQSLNAL--------GAKEQACATFGEIDRKYPNA 378 Query: 172 SPYVKGARFY 181 SP VK + Sbjct: 379 SPQVKASAER 388 >gi|322501245|emb|CBZ36324.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 847 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 26/209 (12%), Positives = 56/209 (26%), Gaps = 40/209 (19%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + ++ +A K +N+++A E + PF G++ +A Sbjct: 444 KALFNRAFCEDKLKNYTRAIEDYTAALDLDPRNPFTHY------NLGISYDHKGRHARAM 497 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 I + + Q A + + + Sbjct: 498 QAFTRAIELDDRHPD-----------FFHNRGFTQRKQGAYAAAIADYTTAISLDPKH-- 544 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANY- 220 + + ++L E + Y Y RG +A + R + + N+ Sbjct: 545 -FKSHYNRAYCFSKLGRYEEAVADYAAALQIDSGNANAYHNRGAALAKLGRLEAAVENFN 603 Query: 221 ---SDAEHAEEAMARLVEAYVALALMDEA 246 + A+ Y L D+A Sbjct: 604 CALRLSPKLTFALNARGLVYDQLQQYDKA 632 >gi|333029576|ref|ZP_08457637.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides coprosuis DSM 18011] gi|332740173|gb|EGJ70655.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides coprosuis DSM 18011] Length = 1006 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 84/240 (35%), Gaps = 48/240 (20%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T + ++++ ++++F+ A P A + +++ M A Y Sbjct: 26 TAITSPDRLFKEGKALFQKESFAAAIPSLKAFVASKPSASLVQEANFMLAVSAYQLKDKN 85 Query: 112 QAASLGEEYITQYPESKNVDYV------------YYLVGMSYAQMIR----------DVP 149 + + EEY+ YP+S + +Y+ Y ++Y + DV Sbjct: 86 R-VKILEEYLNDYPDSPHANYINGLLGSSYYFNEQYEYALAYFNSVDLDYLSNENREDVM 144 Query: 150 YDQRATKLMLQYMSRIVERY-----TNSPYVKGARFYVTVGRNQLAAKE----------- 193 Y Q + L + ++ V + T++ Y K +++Y++ R + Sbjct: 145 YRQATSYLKVDKLNDAVAWFETLRVTSTKYEKDSQYYISYIRYTQGKYDEALKGFLALQA 204 Query: 194 ---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 I Y +G Y A + L+ Y + +++ E L EA D Sbjct: 205 DEKYGELVPYYIASSYFIKGHYDKAQIVAEGYLSQYPNHKYSAEMYRILGEASFQYGQYD 264 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 70/214 (32%), Gaps = 30/214 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YEK F+++QN S+A F Q + +P ++RK+ + Y G Y +A + Sbjct: 624 YEKGRSFVQQQNNSEAIRSFQQLIQKYPENPISRKAAAEVGLLYYQDGNYNEAIKTYKWV 683 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +YP S R K + ++R+ Y A Sbjct: 684 VQKYPGSDEARMAM------------------RDLKSLYVDLNRV------DEYATLAES 719 Query: 181 YVTVGRNQLAAKE----VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 R ++ ++ + + YL RG A F+ L Y + A L Sbjct: 720 MPGGIRMEVTEQDSLTYIAAEKIYL-RGMNSEAKNSFERYLDKYPAGAFSLNAHYYLSVI 778 Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 ++ S + YP + + Sbjct: 779 AGKQGQNEDVITHTSKL-LSYPDNPYYEEALIMR 811 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 72/222 (32%), Gaps = 44/222 (19%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM----SAFVQYSAGK------- 109 Y + ++NFS+A +F + + A G Sbjct: 513 YNLGYIAFNQKNFSEAENWF---------SKYTQLETGDNREALADAFNRRGDCYLHSRA 563 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + QA + DY Y + + V Q+ + +SR+ Y Sbjct: 564 FIQAKGNYTR--ALNTSASVGDYSIYQMAL--------VAGLQKNYSEKINLLSRLANEY 613 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 SPYV A E GR ++++ AI FQ ++ Y + + +A Sbjct: 614 PESPYV--------------AQGWYEKGRSFVQQQNNSEAIRSFQQLIQKYPENPISRKA 659 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 A + Y +EA + + ++YP AR +K Sbjct: 660 AAEVGLLYYQDGNYNEAIKTYKWVVQKYPGSDEARMAMRDLK 701 Score = 39.7 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 71/225 (31%), Gaps = 35/225 (15%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 V LD +++ + +Y +A +LK + A +F + S +++ Sbjct: 128 NSVDLDYLSNENREDVMYRQATSYLKVDKLNDAVAWFETLRVT--STKYEKDSQYYISYI 185 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 +Y+ GKY +A + ++ + K + V Y + SY Sbjct: 186 RYTQGKYDEAL---KGFLALQADEKYGELVPYYIASSYFIK--------GHYDKAQIVAE 234 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAK-------EVEIGRY--------------YLK 202 + +Y N Y + Q E + Y Sbjct: 235 GYLSQYPNHKYSAEMYRILGEASFQYGQYDRTISSLEQYVAAGNKLSRGSAYMLGMAYYN 294 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 G Y A+ LV+ D E + A L +Y+ LA AR Sbjct: 295 TGVYSKAVRNLGLVVTEKQD-ELTQNAYLNLGLSYLQLADKTNAR 338 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 17/153 (11%), Positives = 37/153 (24%), Gaps = 25/153 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y + + +SKA + + + + L A E Sbjct: 286 YMLGMAYYNTGVYSKAVRNLGLVVTEKQD---ELTQNAYLNLGLSYLQLADKTNARMAFE 342 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + + + Y + + A + R + + +S Y Sbjct: 343 QASSMNADLAVKEQALYNYALCIHETSFS------AFGESVNVFERFLNEFPSSQYTDKV 396 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Y+ Y+ Y AA+ Sbjct: 397 SDYLVEL--------------YMNTRSYDAALK 415 Score = 35.9 bits (82), Expect = 6.0, Method: Composition-based stats. Identities = 35/237 (14%), Positives = 71/237 (29%), Gaps = 54/237 (22%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + + +A + F D A + G Y +A + E Y++QYP K Sbjct: 189 QGKYDEALKGFLALQAD---EKYGELVPYYIASSYFIKGHYDKAQIVAEGYLSQYPNHKY 245 Query: 130 VDYVY-----------------------------------YLVGMSYAQ------MIRDV 148 +Y Y++GM+Y +R++ Sbjct: 246 SAEMYRILGEASFQYGQYDRTISSLEQYVAAGNKLSRGSAYMLGMAYYNTGVYSKAVRNL 305 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-----GRNQLAAKEVEIGRYYLKR 203 + L + + + + LA KE + Y L Sbjct: 306 GLVVTEKQDELTQNAYLNLGLSYLQLADKTNARMAFEQASSMNADLAVKEQALYNYALCI 365 Query: 204 G-----EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + ++ F+ L + +++ ++ LVE Y+ D A + ++ I Sbjct: 366 HETSFSAFGESVNVFERFLNEFPSSQYTDKVSDYLVELYMNTRSYDAALKSIARIDR 422 >gi|220907898|ref|YP_002483209.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 7425] gi|219864509|gb|ACL44848.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425] Length = 689 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 42/170 (24%), Positives = 63/170 (37%), Gaps = 33/170 (19%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 + LL A+ Y AG+ +A+ L + + Q+P + V GM AQ Q Sbjct: 5 QKLLTQAYRHYQAGELAEASQLYQRVLQQHPGQLDALQVL---GMIAAQ--------QGD 53 Query: 155 TKLMLQYMSRIVERYT-------NSPYVKGA-----------RFYVTVGRNQLAAKEVEI 196 + + Y + V+ N Y A + + + RN LAA + Sbjct: 54 VETAISYFRQAVQVAPAQADLHYNLGYALEAWGDGPAAIAAYQQALKLNRNHLAAC-YNL 112 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 G +L+RGEY AIP FQ + D A +L A A Sbjct: 113 GELHLQRGEYAGAIPCFQWAIQLQPDLSLAH---YKLGTALQQQGDPKAA 159 >gi|149916642|ref|ZP_01905144.1| lipoprotein, putative [Plesiocystis pacifica SIR-1] gi|149822359|gb|EDM81748.1| lipoprotein, putative [Plesiocystis pacifica SIR-1] Length = 323 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 28/85 (32%), Gaps = 8/85 (9%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G+Y +A + +P D Y G S DQ L+ + Sbjct: 214 YKDGRYAEAEKAFAAIVRAHPNDDYADNALYWQGESAY--------DQAHYADALKAFTA 265 Query: 165 IVERYTNSPYVKGARFYVTVGRNQL 189 +VERY A + + +L Sbjct: 266 VVERYGGGNKAPDALLKIGLCYGRL 290 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 16/118 (13%), Positives = 36/118 (30%), Gaps = 8/118 (6%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 K+ +++A + F R P A +L Y Y A + +Y Sbjct: 214 YKDGRYAEAEKAFAAIVRAHPNDDYADNALYWQGESAYDQAHYADALKAFTAVVERYGGG 273 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 +G+ Y ++ +++++ Y + K A+ + Sbjct: 274 NKAPDALLKIGLCYGRL--------GDADNARDVLTQLIAAYPRAAASKIAKRKLADL 323 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 14/112 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + IV + N Y A ++ + Y A+ F V Sbjct: 221 EAEKAFAAIVRAHPNDDYADNALYWQGESA--------------YDQAHYADALKAFTAV 266 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + Y A +A+ ++ Y L D AR+V++ + YP+ ++ + Sbjct: 267 VERYGGGNKAPDALLKIGLCYGRLGDADNARDVLTQLIAAYPRAAASKIAKR 318 >gi|254282190|ref|ZP_04957158.1| tetratricopeptide TPR_2 repeat protein [gamma proteobacterium NOR51-B] gi|219678393|gb|EED34742.1| tetratricopeptide TPR_2 repeat protein [gamma proteobacterium NOR51-B] Length = 304 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 2/95 (2%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG- 108 V + Y+ A +K++ F+ A F D+PF A + + Sbjct: 172 DVQATPAEEAAYQSAYELVKQRRFAPAVSAFKAFLGDYPFGRYAPNAHYWLGELYLVVDP 231 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 + + A + + QYP + + Y +G + Sbjct: 232 AEPEMARQSFKLLLDQYPNNPKIPDALYKLGRVHY 266 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 38/90 (42%), Gaps = 6/90 (6%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A ++ SA+ ++ A S + ++ YP + +Y +G Y + D Sbjct: 178 AEEAAYQSAYELVKQRRFAPAVSAFKAFLGDYPFGRYAPNAHYWLGELY------LVVDP 231 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYV 182 ++ Q ++++Y N+P + A + + Sbjct: 232 AEPEMARQSFKLLLDQYPNNPKIPDALYKL 261 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 32/108 (29%), Gaps = 16/108 (14%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYV--TVGRNQLAAKEVEIGRYYLKRGEYVAA 209 QR + + Y Y A +++ A E+ A Sbjct: 192 QRRFAPAVSAFKAFLGDYPFGRYAPNAHYWLGELYLVVDPAEPEM--------------A 237 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 F+L+L Y + +A+ +L + ++E + Y Sbjct: 238 RQSFKLLLDQYPNNPKIPDALYKLGRVHYIKGNRQRSKEYLDRAIREY 285 >gi|157879370|pdb|1NA0|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized Tpr Motif gi|157879371|pdb|1NA0|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized Tpr Motif Length = 125 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 14/117 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + K+ ++ +A EY+ + P ++ Y G Y +A ++ Sbjct: 13 YNLGNAYYKQGDYDEAIEYYQKALELDPNNA---EAWYNLGNAYYKQGDYDEAIEYYQKA 69 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P + +Y +G +Y + Q ++Y + +E N+ K Sbjct: 70 LELDPNN---AEAWYNLGNAYYK--------QGDYDEAIEYYQKALELDPNNAEAKQ 115 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 26/78 (33%), Gaps = 3/78 (3%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D Y + K+ ++ +A EY+ + P ++ Y G Y + Sbjct: 39 DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA---EAWYNLGNAYYKQGDYDE 95 Query: 113 AASLGEEYITQYPESKNV 130 A ++ + P + Sbjct: 96 AIEYYQKALELDPNNAEA 113 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 42/126 (33%), Gaps = 28/126 (22%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + ++ Y G Y +A ++ + P + +Y +G +Y + Q Sbjct: 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---AEAWYNLGNAYYK--------Q 56 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 ++Y + +E N+ +G Y K+G+Y AI Sbjct: 57 GDYDEAIEYYQKALELDPNNAEAW-----------------YNLGNAYYKQGDYDEAIEY 99 Query: 213 FQLVLA 218 +Q L Sbjct: 100 YQKALE 105 >gi|297183049|gb|ADI19194.1| hypothetical protein [uncultured delta proteobacterium HF0130_20J24] Length = 239 Score = 52.0 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 51/119 (42%), Gaps = 12/119 (10%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-YSAGKYQ-QAASLGEEY 120 + ++ L+ N +A E + K+ ++ A + A Y Q+AS + Sbjct: 131 QGLISLQAGNPDQAVEDLQDILNHKKPTRL--KAEILLAVAHSFLAQGYAKQSASHYSTF 188 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + +YP+S++ Y +G + ++ K ++ ++ +Y NSP+ K A+ Sbjct: 189 LREYPKSRHTPKALYYLGEAMMELGEQ--------KKQKVLLNELINKYPNSPFSKRAK 239 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 33/74 (44%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + +L +G + + L Y + H +A+ L EA + L + + +++ + Sbjct: 166 LAVAHSFLAQGYAKQSASHYSTFLREYPKSRHTPKALYYLGEAMMELGEQKKQKVLLNEL 225 Query: 254 QERYPQGYWARYVE 267 +YP +++ + Sbjct: 226 INKYPNSPFSKRAK 239 >gi|330721822|gb|EGG99796.1| Glutathione peroxidase [gamma proteobacterium IMCC2047] Length = 282 Score = 52.0 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 22/129 (17%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 AF +Y +A++ E+ I YP+S G SY + +V + K L Sbjct: 167 AFSLVRNKQYAEASAAFEQLIKDYPDSHYT-------GNSYYWL-GEVLLVESKQKQALD 218 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 ++E+Y N A+F G+ YL+ G+ Q VL Y Sbjct: 219 AFESLLEKYPNHRKAPDAKFKQ--------------GKIYLQMGDKAQGKVILQDVLEQY 264 Query: 221 SDAEHAEEA 229 D+ A+ A Sbjct: 265 PDSSAAKLA 273 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 46/126 (36%), Gaps = 8/126 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A ++ + +++A F Q +D+P + S V K +QA E Sbjct: 164 YQVAFSLVRNKQYAEASAAFEQLIKDYPDSHYTGNSYYWLGEVLLVESKQKQALDAFESL 223 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +YP + + G Y QM + ++E+Y +S K A Sbjct: 224 LEKYPNHRKAPDAKFKQGKIYLQMGDKA--------QGKVILQDVLEQYPDSSAAKLAAA 275 Query: 181 YVTVGR 186 + + Sbjct: 276 EIRDAK 281 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 43/108 (39%), Gaps = 14/108 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 ++++ Y +S Y + +++ L K+ + A+ F+ + Sbjct: 178 EASAAFEQLIKDYPDSHYTGNSYYWLGEV--LLVES---------KQKQ---ALDAFESL 223 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 L Y + A +A + + Y+ + + + ++ + E+YP A+ Sbjct: 224 LEKYPNHRKAPDAKFKQGKIYLQMGDKAQGKVILQDVLEQYPDSSAAK 271 >gi|322421139|ref|YP_004200362.1| hypothetical protein GM18_3658 [Geobacter sp. M18] gi|320127526|gb|ADW15086.1| conserved repeat domain protein [Geobacter sp. M18] Length = 811 Score = 52.0 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 30/74 (40%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 +++ +++++ A E + + +P + ++ A Y G Q+A Sbjct: 34 SEDSQIFISGFNAYQKKDYKSAIESMSGLLKKYPDTPLKDMAIFWLARANYKVGNNQEAG 93 Query: 115 SLGEEYITQYPESK 128 +++ YPES Sbjct: 94 KYMAQFLRDYPESP 107 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 25/61 (40%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 ++ +Y +AI +L Y D + A+ L A + EA + ++ YP+ Sbjct: 47 YQKKDYKSAIESMSGLLKKYPDTPLKDMAIFWLARANYKVGNNQEAGKYMAQFLRDYPES 106 Query: 261 Y 261 Sbjct: 107 P 107 Score = 40.1 bits (93), Expect = 0.38, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 9/86 (10%) Query: 89 FAGVARKSLL-MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 F+ + S + +S F Y Y+ A + +YP++ D + + + + Sbjct: 30 FSLDSEDSQIFISGFNAYQKKDYKSAIESMSGLLKKYPDTPLKDMAIFWLARANYK---- 85 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSP 173 + +YM++ + Y SP Sbjct: 86 ----VGNNQEAGKYMAQFLRDYPESP 107 >gi|309791088|ref|ZP_07685623.1| serine/threonine protein kinase with TPR repeats [Oscillochloris trichoides DG6] gi|308226872|gb|EFO80565.1| serine/threonine protein kinase with TPR repeats [Oscillochloris trichoides DG6] Length = 858 Score = 52.0 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 16/155 (10%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY--EKAVLFLKEQNFSKAYEYF 80 A+ + FS SS + D+ ++ L+ ++ +A F Sbjct: 562 AIAVTFSEDYSLTDNSVSLSSSEENYQQAIDLLPNVALFHTNMGYLYNNSADYEQARSAF 621 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 P + + L + Y + +A + ++ P + N Y G Sbjct: 622 ETALDIDP--NYSE-AQLGIGWGYYRQDQGTKADEAFDTALSMNPNNPNTHYA---KG-- 673 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + +D + + Y R + S Y Sbjct: 674 ------RIAFDNDEYRNAINYFERANQLNPRSTYT 702 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 56/217 (25%), Gaps = 74/217 (34%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--------------------------- 93 Y K + + A YF + ++ P + Sbjct: 670 YAKGRIAFDNDEYRNAINYFERANQLNPRSTYTLAWLARAYQFEGFFADNDATRKDLYAK 729 Query: 94 -----RKSLLMS----AFV--------QYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 R++ L AF QY KY+++ S+ E I P D Y Sbjct: 730 AESIYRQA-LDIRPNFAFATSGLGWVLQYQ-EKYEESISIFERAIELNPND---DEAYNG 784 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 +G S + R + + N + +L Sbjct: 785 LGWSLFNLDR--------LGDAETAFRQSTQLAPNYASPQYGLGRTLEELGRLDE----- 831 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 R AA F+ L AEEA+ RL Sbjct: 832 AR---------AA---FKTTLEIDPTYTQAEEALKRL 856 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 47/173 (27%), Gaps = 41/173 (23%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 E+N+ +A + + ++ ++ Y+QA S E + Sbjct: 583 SEENYQQAIDLLPNVALFHT----------NMGYLYNNSADYEQARSAFETALDI---DP 629 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 N +G Y + DQ + + N+P A+ + Sbjct: 630 NYSEAQLGIGWGYYRQ------DQGT--KADEAFDTALSMNPNNPNTHYAKGRIA----- 676 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 EY AI F+ + + +A L AY Sbjct: 677 ------------FDNDEYRNAINYFERANQLNPRSTYT---LAWLARAYQFEG 714 >gi|148264213|ref|YP_001230919.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4] gi|146397713|gb|ABQ26346.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4] Length = 337 Score = 52.0 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 14/127 (11%), Positives = 36/127 (28%), Gaps = 43/127 (33%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +E+A + N+ + + Q +P G + + Sbjct: 63 FEEANNSFSQGNYKASLNKYEQIIEKYPTTGDRVLFEMGIIYA----------------- 105 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +P+++ DY + L+ ++++ Y S Y + + Sbjct: 106 ---HPKNEQKDY-----------------------QKSLECFQKLIKDYPGSGYRQDSER 139 Query: 181 YVTVGRN 187 + N Sbjct: 140 MIFYINN 146 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 9/76 (11%), Positives = 30/76 (39%), Gaps = 10/76 (13%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ------ 254 +G Y A++ +++ ++ Y + + + Y +E ++ ++ Sbjct: 70 FSQGNYKASLNKYEQIIEKYPTTG--DRVLFEMGIIYAH--PKNEQKDYQKSLECFQKLI 125 Query: 255 ERYPQGYWARYVETLV 270 + YP + + E ++ Sbjct: 126 KDYPGSGYRQDSERMI 141 >gi|146094076|ref|XP_001467149.1| hypothetical protein [Leishmania infantum JPCM5] gi|134071513|emb|CAM70202.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 847 Score = 52.0 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 26/209 (12%), Positives = 56/209 (26%), Gaps = 40/209 (19%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + ++ +A K +N+++A E + PF G++ +A Sbjct: 444 KALFNRAFCEDKLKNYTRAIEDYTAALDLDPRNPFTHY------NLGISYDHKGRHARAM 497 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 I + + Q A + + + Sbjct: 498 QAFTRAIELDDRHPD-----------FFHNRGFTQRKQGAYAAAIADYTTAISLDPKH-- 544 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANY- 220 + + ++L E + Y Y RG +A + R + + N+ Sbjct: 545 -FKSHYNRAYCFSKLGRYEEAVADYAAALQIDSGNANAYHNRGAALAKLGRLEAAVENFN 603 Query: 221 ---SDAEHAEEAMARLVEAYVALALMDEA 246 + A+ Y L D+A Sbjct: 604 CALRLSPKLTFALNARGLVYDQLQQYDKA 632 >gi|189423651|ref|YP_001950828.1| hypothetical protein Glov_0581 [Geobacter lovleyi SZ] gi|189419910|gb|ACD94308.1| conserved repeat domain protein [Geobacter lovleyi SZ] Length = 880 Score = 52.0 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 24/61 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 ++ EY AA+ R VL Y + + + L A+ + +A ++ YP Sbjct: 44 YQQKEYPAAVARLGEVLKKYPETPLRDMTLFWLARAHYKVGNRSDAARYMAQFTREYPDN 103 Query: 261 Y 261 Sbjct: 104 P 104 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 34/105 (32%), Gaps = 8/105 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LT F + + + V +++ +++ + A + Sbjct: 8 LTAFLTCLLIATLLCAAT--------VVAQETEDSQLFLSGFNAYQQKEYPAAVARLGEV 59 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 + +P + +L A Y G AA ++ +YP++ Sbjct: 60 LKKYPETPLRDMTLFWLARAHYKVGNRSDAARYMAQFTREYPDNP 104 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 12/102 (11%) Query: 93 ARKSLL-MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 S L +S F Y +Y A + E + +YPE+ D + + ++ ++ Sbjct: 31 TEDSQLFLSGFNAYQQKEYPAAVARLGEVLKKYPETPLRDMTLFWLARAHYKVGNRSD-- 88 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 +YM++ Y ++P + A E Sbjct: 89 ------AARYMAQFTREYPDNPLKNTVEDELLALA---AQHE 121 >gi|225166241|ref|ZP_03727945.1| tetratricopeptide TPR_2 repeat protein [Opitutaceae bacterium TAV2] gi|224799519|gb|EEG18044.1| tetratricopeptide TPR_2 repeat protein [Opitutaceae bacterium TAV2] Length = 218 Score = 52.0 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 21/57 (36%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 +N K E + P++ A +L+ A G A + I YP++ Sbjct: 160 KNRGKGVEQLEKILVSAPYSEYAPLALMSIARGHSLMGDPDGAIDALDRMINNYPQN 216 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 70/195 (35%), Gaps = 23/195 (11%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 GW+ + S T+ R E+ KA + + S A + + Q ++ + + A + Sbjct: 36 AGWQVEGGALAPYFSSTEGRNALELMNKARADEEAGHESSAIKGYLQVTKSYGTSIYAPE 95 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPE----SKNVDYVYYLV--GMSYAQMIRDVP 149 +L + K+ +A +E ++++P ++ + Y + G+ R + Sbjct: 96 ALFRLGGLYNKERKFTKAFDAYQEIVSKHPNYAKFNETIG-AQYRIATGLVDGARGRILG 154 Query: 150 YDQ--RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 + ++ + +I+ S Y A + I R + G+ Sbjct: 155 VFPGFKNRGKGVEQLEKILVSAPYSEYAPLAL--------------MSIARGHSLMGDPD 200 Query: 208 AAIPRFQLVLANYSD 222 AI ++ NY Sbjct: 201 GAIDALDRMINNYPQ 215 >gi|327269026|ref|XP_003219296.1| PREDICTED: intraflagellar transport protein 88 homolog [Anolis carolinensis] Length = 820 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 38/272 (13%), Positives = 87/272 (31%), Gaps = 40/272 (14%) Query: 8 AICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF 67 + +FE ++ A T + FL Q+S L TD + K Sbjct: 438 TLKMFEKKDSRVKSAAATNLSFLY--FLENEVTQASTYSDLAVNTDRYNPAALTNKGNTI 495 Query: 68 LKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 ++ KA E++ D + +L + +A + ++ + Sbjct: 496 FVNGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTLKKLNRLDEAL---DSFLKLHAI 548 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 +N V + + S +++ D ++++ +++ + A + Sbjct: 549 LRNSAQVLFQIA-SIYELMEDPN-------QAIEWLMQLISVVPTDSH---ALAKLGELY 597 Query: 187 NQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVLANYSDAEHAEEAMARLVEA--------- 236 + K + +YY + Y + I + + A Y D + E+A+ A Sbjct: 598 DNEGDKS-QAFQYYFESYRYFPSNIEVIEWLGAYYIDTQFCEKAIHYFERAALIQPTQVK 656 Query: 237 --------YVALALMDEAREVVSLIQERYPQG 260 Y +A + +I ++P Sbjct: 657 WQLMVASCYRRSGNYQKALDTYKMIHRKFPDN 688 >gi|317484568|ref|ZP_07943474.1| tol-pal system protein YbgF [Bilophila wadsworthia 3_1_6] gi|316924167|gb|EFV45347.1| tol-pal system protein YbgF [Bilophila wadsworthia 3_1_6] Length = 139 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 45/127 (35%), Gaps = 8/127 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 + +Y+ V +N+ +A + F+ + + + + Y G + AA Sbjct: 17 AKALYDNGVQSFNARNYKQALKSFSDFTDTYGKHKLVSNAWFWRGECNYQLGNFPAAALD 76 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 E+ I++Y S Y GM + + + + +++++ SP Sbjct: 77 YEQVISKYGSSGKAASAYLKQGMCFIKAGKK--------DAAKVRLQELIKKFPKSPEAT 128 Query: 177 GARFYVT 183 A + Sbjct: 129 RATQLMK 135 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 48/141 (34%), Gaps = 22/141 (15%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 K+L + ++A Y+QA ++ Y + K V ++ G Q+ Sbjct: 18 KALYDNGVQSFNARNYKQALKSFSDFTDTYGKHKLVSNAWFWRGECNYQLGNFP------ 71 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 +++ +Y +S A + ++K G+ AA R Q Sbjct: 72 --AAALDYEQVISKYGSSGKAASAYLKQGMC--------------FIKAGKKDAAKVRLQ 115 Query: 215 LVLANYSDAEHAEEAMARLVE 235 ++ + + A A + + Sbjct: 116 ELIKKFPKSPEATRATQLMKD 136 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 22/143 (15%) Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ Y G+ R K L+ S + Y V A F+ Q Sbjct: 15 DIAKALYDNGVQSFNA--------RNYKQALKSFSDFTDTYGKHKLVSNAWFWRGECNYQ 66 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L G + AA ++ V++ Y + A A + ++ D A+ Sbjct: 67 L--------------GNFPAAALDYEQVISKYGSSGKAASAYLKQGMCFIKAGKKDAAKV 112 Query: 249 VVSLIQERYPQGYWARYVETLVK 271 + + +++P+ A L+K Sbjct: 113 RLQELIKKFPKSPEATRATQLMK 135 >gi|332709548|ref|ZP_08429509.1| murein transglycosylase family protein [Lyngbya majuscula 3L] gi|332351807|gb|EGJ31386.1| murein transglycosylase family protein [Lyngbya majuscula 3L] Length = 731 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 39/264 (14%), Positives = 83/264 (31%), Gaps = 58/264 (21%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 D + R Y A +++ +A ++ D+P +A L A Sbjct: 75 DAFASGPKSREQYRARYLLASDLIQQNQPEQALKHLEGLESDYP--VLASHVALKRAQAY 132 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD-VPYDQRATKLMLQYMS 163 + G + A + + + +YP Y +G S + D + + + Sbjct: 133 QAMGDRESATGVWQTILKKYPNQAVAAEALYHLGKSNPKHWDDAIAKFPSHPRTLEIVRQ 192 Query: 164 RIVERYTN--------SPYVKGARFYVTVGRNQLAAK----------EVEIGRYYLKRGE 205 R+ N + + A + R+++ K E+ IG Y + + Sbjct: 193 RLKNN-PNQLPLLLILAKHTPKA-LGMQEIRDRIVDKYPEQLTPEDWEM-IGTGYWETWK 249 Query: 206 YVAA----------------IPR--------------FQLVLANYSDAEHAEEAMARLVE 235 Y A R ++ +++ Y +A+ A+ RL Sbjct: 250 YGKAGKAYAQAPRTPRNLYRAGRGLHLDTKASKGKIFYEQLISAYPNAKETGLALRRLA- 308 Query: 236 AYVALALMDEAREVVSLIQERYPQ 259 +++ EA + + + YP Sbjct: 309 ---SISKRTEALAYLDQVIQNYPD 329 Score = 35.9 bits (82), Expect = 6.5, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 68/209 (32%), Gaps = 28/209 (13%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 R R +Y + SK ++ Q +P A +L A S K +A Sbjct: 262 RTPRNLYRAGRGLHLDTKASKGKIFYEQLISAYPNAKETGLALRRLA----SISKRTEAL 317 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + ++ I YP+ ++ V Q ++ +Y +S Sbjct: 318 AYLDQVIQNYPD--EAPQALLDKAKILEKLNSKVS--------AGQARKSVLTQYGSSD- 366 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 A + + + + A G+ A Q + D++ A +A + Sbjct: 367 -AAANYRWQMAQKKAAK------------GKLQEAWQWAQPITTKNPDSDIAAQAGFWVG 413 Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWA 263 L ++A+ + RYP+ Y+A Sbjct: 414 RWASQLGRPNDAKAAFEHVIARYPESYYA 442 >gi|328701581|ref|XP_003241648.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 2 [Acyrthosiphon pisum] Length = 975 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 104/276 (37%), Gaps = 37/276 (13%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 + L + + EA A+T F++A F + Q + Y D + + + Sbjct: 271 LEESLSLSKKMVEADPQYYNSIAVTTTFNLARIFEAQCQFQKAETFYKDILKEHPNYIDC 330 Query: 61 YEK-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 Y + + +A ++F + + P + L A +++ G+ Sbjct: 331 YLRLGCMARDRNQIYEASDWFKEALRIDNEHP-DAWSLLGNLHLAKMEWGPGQ------- 382 Query: 117 GEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYT 170 +++ P + N Y +G + Q + ++ R L LQ+ +++++ Sbjct: 383 -KKFERVLKNPSTLNDSYSLIALGNVWLQTLHQPTRNKEQEKRHQDLALQFFTKVLKNDP 441 Query: 171 NSPYVKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRF 213 + + + Y+ R+ A +E + I Y+++ +Y++AI + Sbjct: 442 KNIWAANGIGCVMAHKQYINEARDIFAQVREATADFCDVWLNIAHIYIEQKQYISAIQMY 501 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 + + + ++ E + L AY + EA++V Sbjct: 502 ENCIKKFFKHDNV-EILQYLGRAYFKAGKLKEAKKV 536 >gi|226953080|ref|ZP_03823544.1| tol-pal system protein YbgF [Acinetobacter sp. ATCC 27244] gi|294650669|ref|ZP_06728023.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|226836172|gb|EEH68555.1| tol-pal system protein YbgF [Acinetobacter sp. ATCC 27244] gi|292823460|gb|EFF82309.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 269 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 17/120 (14%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209 Q K +Q M ++ + N Y+ A F++ +YL Y AA Sbjct: 163 QGGAKQAIQPMQNFIKNHPNGIYIGNAYFWL--------------AEFYLAVEPVNYTAA 208 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + V+ Y ++ A A+ +L A +A + + + +YPQ A++++ Sbjct: 209 KQNYTTVVNQYPNSARASRALYQLYSIAKEVDKNTAQANQYRTKLLAQYPQSEEAKFIQK 268 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 45/138 (32%), Gaps = 23/138 (16%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + ++ Y A+ K+ +A + ++ P + ++ Sbjct: 146 QIELEKAAYTVALDAYKQGGAKQAIQPMQNFIKNHPNGIY-------IGNAYFWLAEFYL 198 Query: 113 AA------SLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 A + + Y + QYP S Y + + ++V + T QY + Sbjct: 199 AVEPVNYTAAKQNYTTVVNQYPNSARASRALYQL----YSIAKEVD---KNTAQANQYRT 251 Query: 164 RIVERYTNSPYVKGARFY 181 +++ +Y S K + Sbjct: 252 KLLAQYPQSEEAKFIQKK 269 Score = 35.5 bits (81), Expect = 7.8, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 48/145 (33%), Gaps = 31/145 (21%) Query: 95 KSLLMSAFVQ------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 + L A Y G +QA + +I +P + Y+ + + + V Sbjct: 146 QIELEKA-AYTVALDAYKQGGAKQAIQPMQNFIKNHPNGIYIGNAYFWLA-EFYLAVEPV 203 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 Y Q + +V +Y NS A + + I + + + A Sbjct: 204 NY-----TAAKQNYTTVVNQYPNSARASRALYQL-----------YSIAK---EVDKNTA 244 Query: 209 AIPRFQL-VLANYSDAEHAEEAMAR 232 +++ +LA Y + EEA Sbjct: 245 QANQYRTKLLAQYPQS---EEAKFI 266 >gi|254509854|ref|ZP_05121921.1| tetratricopeptide TPR_2 [Rhodobacteraceae bacterium KLH11] gi|221533565|gb|EEE36553.1| tetratricopeptide TPR_2 [Rhodobacteraceae bacterium KLH11] Length = 276 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 49/150 (32%), Gaps = 14/150 (9%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 S+ +D ++ ++ A L + +F A F Q + +P + +A ++ L Sbjct: 135 SPTPSQPAAIDQGELAIGEQADFDAASQALADGDFQSAANLFAQFDQSYPGSPLASEANL 194 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPES---KNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 G ++AA ++ + + +G + ++ T Sbjct: 195 RRGQALEGLGDTREAARA---FLASFTGDSEGPMAPEALFELGSALGRL--------GQT 243 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + + R+ +SP A + Sbjct: 244 DQACITLGEVGVRFPSSPLAGSATQEMASL 273 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 32/112 (28%), Gaps = 20/112 (17%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + ++ + Y SP A L R Sbjct: 167 GDFQSAANLFAQFDQSYPGSPLASEANLRRGQALEGLGD----------TREA------- 209 Query: 213 FQLVLANY---SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + LA++ S+ A EA+ L A L D+A + + R+P Sbjct: 210 ARAFLASFTGDSEGPMAPEALFELGSALGRLGQTDQACITLGEVGVRFPSSP 261 >gi|242018035|ref|XP_002429488.1| tpr repeat nuclear phosphoprotein, putative [Pediculus humanus corporis] gi|212514426|gb|EEB16750.1| tpr repeat nuclear phosphoprotein, putative [Pediculus humanus corporis] Length = 1217 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 80/265 (30%), Gaps = 52/265 (19%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF------- 89 R + + Y A L + +A + + R+ P Sbjct: 482 SLARAKTESEIDPQYYNSISVTTTYNLARLNESLCQYDRAEKLYKDILREHPNYVDCYLR 541 Query: 90 -AGVAR-KSLLMSA-----FVQYSAGKYQQAASLG--------------EEYITQYPESK 128 +AR K + A + A SL +++ S Sbjct: 542 LGCMARDKGQISEASDWFKDALQINNDHPDAWSLLGNLHLAQMEWGPGQKKFERILKNSS 601 Query: 129 NVDYVYYLVGM------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA---- 178 Y L+ + + Q RD ++R + L +++ + + Sbjct: 602 TSSDAYSLIALGNVWLQTLHQPTRDKEREKRHQERALAMYKQVLRNDPRNIWAANGIGAV 661 Query: 179 ---RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 + + R+ A +E + I Y+++ +Y++AI ++ L + H Sbjct: 662 LAHKGAINEARDVFAQVREATADFCDVWLNIAHIYVEQKQYISAIQMYENCLRKFYKYPH 721 Query: 226 AEEAMARLVEAYVALALMDEAREVV 250 E + L AY + EA+ + Sbjct: 722 V-EVLQYLARAYFKAGKLKEAKMTL 745 >gi|115375328|ref|ZP_01462592.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca DW4/3-1] gi|115367701|gb|EAU66672.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca DW4/3-1] Length = 448 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 13/113 (11%), Positives = 34/113 (30%), Gaps = 22/113 (19%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQ-------------------REVYEKAVLFLKE 70 + + L G S R++ E++ Sbjct: 80 VGLLGLAGCRTTGSGARQETPAPATRHEVEFEPVTVTGDLELERLNDEELFAGGTSAFAA 139 Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++F +A YF + + P + R++L + ++++A + + Sbjct: 140 EDFKQAARYFGRLADFHPQSSHRRQALYNAGLAHQRLKEWEEA---YQRFSEL 189 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 14/102 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K +Y R+ + + S + + A + + +L E+ A R Sbjct: 140 EDFKQAARYFGRLADFHPQSSHRRQALYNAGLAHQRL--------------KEWEEAYQR 185 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 F + + A +A RL E L +EA + ++ Sbjct: 186 FSELADAAAGQGEALDAAFRLAETQYHLERFEEAAAQLRVLA 227 >gi|254465845|ref|ZP_05079256.1| adenylyl cyclase class-3/4/guanylyl cyclase [Rhodobacterales bacterium Y4I] gi|206686753|gb|EDZ47235.1| adenylyl cyclase class-3/4/guanylyl cyclase [Rhodobacterales bacterium Y4I] Length = 589 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 76/241 (31%), Gaps = 64/241 (26%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKA---YEYFNQCSRDFPFAG-----------VARKS-L 97 D R + +YE+A+ ++Q++++A + +A A+++ Sbjct: 365 DNREAQTLYERALS--RDQDYARASAAISRTLNIDWRYSWAKDAEHALDTALSYAQRAVE 422 Query: 98 LM---------SAFVQYSAGKYQQAASLGEEYITQYPESKNV--DYVYYLVGMSYAQMIR 146 L FV ++ A + P ++ DY +++ Sbjct: 423 LDPTDARGFGELGFVHLYRKEHDAAIGAYRRALALNPNDADLLSDYA---DALAH----- 474 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +A LQ R+ + + +G Y +Y Sbjct: 475 --SGDNQAAIGNLQQAMRLNPYFPD-------------------QYLWHLGGAYYNLKQY 513 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 A I + N E L +Y L +D+AR + + +E +P R+ Sbjct: 514 DAVIDTLTKM--NNPT-----EGQRMLAASYAQLGDIDQARTMAARHREAHPNFSLDRWA 566 Query: 267 E 267 + Sbjct: 567 K 567 >gi|149202854|ref|ZP_01879825.1| hypothetical protein RTM1035_18966 [Roseovarius sp. TM1035] gi|149143400|gb|EDM31436.1| hypothetical protein RTM1035_18966 [Roseovarius sp. TM1035] Length = 280 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 54/135 (40%), Gaps = 10/135 (7%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D+ +R+ +++A L+ N S+A F +P + ++ ++ L+ +AG Sbjct: 149 DNPQLAIGERDDFDRAEAALQAGNNSEAAAGFAAFLSTYPGSPLSGRAGLLRGEALEAAG 208 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 + + A + + + P+ + +G + ++ T+ + ++ Sbjct: 209 QQSEAARAYLDSFSAA-PDGSEAPEALFRLGRALGRL--------GQTQEACVTLGQVEA 259 Query: 168 RYTNSPYVKGARFYV 182 RY + V A+ + Sbjct: 260 RYPTAAAVSSAQSEM 274 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 37/118 (31%), Gaps = 19/118 (16%) Query: 146 RDVPYDQRATK-----LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 D + A + + + Y SP A A ++ E R Y Sbjct: 159 DDFDRAEAALQAGNNSEAAAGFAAFLSTYPGSPLSGRAGLLRGEALEA-AGQQSEAARAY 217 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 L + AA D A EA+ RL A L EA + ++ RYP Sbjct: 218 L--DSFSAA-----------PDGSEAPEALFRLGRALGRLGQTQEACVTLGQVEARYP 262 >gi|254412567|ref|ZP_05026341.1| Transglycosylase SLT domain protein [Microcoleus chthonoplastes PCC 7420] gi|196180877|gb|EDX75867.1| Transglycosylase SLT domain protein [Microcoleus chthonoplastes PCC 7420] Length = 730 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 72/250 (28%), Gaps = 36/250 (14%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREV---YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 LV Q+ + +D + + + Y A + +Q A ++ +P Sbjct: 62 LVSLSPQARAEQLMDIASGRQSLDQYRARYLLASDLIGQQQPEAALQWLEGLDAKYP--Q 119 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY----AQMIRD 147 +A L A + G A + + YP + Y +G S Q I Sbjct: 120 LASHIALKRAQAYTAMGDTANAEQAWQGILETYPSDPVAAHALYALGESNPEYWQQAIAQ 179 Query: 148 VPYDQRATKLMLQYMSR------IVERYTNSPYVKGARFYVTVGRNQLAAKEVE------ 195 P R ++ Q + ++ S Y R++L E Sbjct: 180 FPTHPRTLDIVRQKLQENPKQLNLLLHLAKSAYDTPGS---GGIRDRLV-NEYASGLQPQ 235 Query: 196 ----IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 I Y + EY A Y+ A E R+ Y EA+ Sbjct: 236 DWQTIAFGYWETREYDKAA-------KAYTKAPPTPENAYRVGRGYHLKGKRQEAKAGYQ 288 Query: 252 LIQERYPQGY 261 + +P Sbjct: 289 QLIRTFPDAK 298 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 51/169 (30%), Gaps = 35/169 (20%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 AF + +Y +A + Y P +N Y VG Y + + Sbjct: 240 IAFGYWETREYDKA---AKAYTKAPPTPENA----YRVGRGYHLKGKR--------QEAK 284 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 +++ + + K + + L ++E AIP V+A Sbjct: 285 AGYQQLIRTFPD---AKETGLGLRRLASLLPSQE---------------AIPYLDQVVAK 326 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + D A EA+ AL A + + +YP A Sbjct: 327 FPD--EAPEALLTKANILEALGSSQSATQARQSVLTQYPNSDAAADYRW 373 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 39/268 (14%), Positives = 89/268 (33%), Gaps = 40/268 (14%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + +A RD ++ ++ A + + + + KA + + + Sbjct: 201 LNLLLHLAKSAYDTPGSGGIRDRLVNEYASGLQPQDWQTIAFGYWETREYDKAAKAYTKA 260 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 P A + + GK Q+A + ++ I +P++K G+ + Sbjct: 261 P---PTPENAYRV----GRGYHLKGKRQEAKAGYQQLIRTFPDAKET-------GLGLRR 306 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTN------------------SPYVKGARFYVTVG 185 + +P ++ + Y+ ++V ++ + S AR V Sbjct: 307 LASLLP-----SQEAIPYLDQVVAKFPDEAPEALLTKANILEALGSSQSATQARQSVLTQ 361 Query: 186 R---NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 + A ++ + G A Q + + D+ A EA + + L Sbjct: 362 YPNSDAAADYRWQVANQKAQAGNLAEAWQWAQPITTDSPDSAIAPEAAFWVGRWAMQLGR 421 Query: 243 MDEAREVVSLIQERYPQGYWARYVETLV 270 +EA + +YP+ Y+A + Sbjct: 422 QEEATSAFEHVLAQYPESYYAWRSARFL 449 >gi|222053244|ref|YP_002535606.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32] gi|221562533|gb|ACM18505.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32] Length = 323 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 44/158 (27%), Gaps = 53/158 (33%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 + + + G S + Y T +E+A + ++ A + Q +P Sbjct: 21 VIMALICGCSHFS--EEYKARPT--------FEEANKLFSQGSYHTALTKYKQIKEQYPT 70 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + L I +P+++ DY Sbjct: 71 --MGDRVLFEMGV------------------IHGHPQNEQKDY----------------- 93 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 + L+ ++V Y S Y + + + N Sbjct: 94 ------EKALECFQKLVRDYPGSGYRQDSEMMMFYINN 125 >gi|320106859|ref|YP_004182449.1| transcriptional regulator CadC [Terriglobus saanensis SP1PR4] gi|319925380|gb|ADV82455.1| transcriptional regulator, CadC [Terriglobus saanensis SP1PR4] Length = 713 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 70/223 (31%), Gaps = 35/223 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + + + +A F+ P F +++ V + AG+Y++A YI Sbjct: 492 GMTYQQAGKLYQAIAEFSAALSLDPEFEP----AIVHMGDVYFQAGRYEEAIQQYRRYIG 547 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY--VKGARF 180 + +G I V Q+ K + R + ++ + + A Sbjct: 548 A--AHTDAARA---IG---YGNIAAVYRQQQNLKEAAKAAEREIHYDPHAIWNSLVIAVD 599 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGE------------YVA--------AIPRFQLVLANY 220 + ++ R +RG ++A AI FQ L + Sbjct: 600 EKHAAKVHHYEVALQSARNSQERGTPGDRRTIAYQRGWLALQRGDRSKAIASFQEALQHI 659 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + + L +A++ L + +A + P +A Sbjct: 660 PATSGIDLHDSCLADAFMQLGMQQKAETEYRRLLANNPSDPFA 702 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 69/243 (28%), Gaps = 67/243 (27%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-------RKSL--LMSAFVQY 105 ++ +Y A E+N+ +A + ++ P A ++SL L +A Sbjct: 381 TEKQRLYIAAWRATAEENYDEAARIYATITQRCPHDPEAFRQLAKLQRSLEHLDAANATL 440 Query: 106 SAG----------------------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +G Y A +EY+ P N + +GM+Y Q Sbjct: 441 QSGLTANPNASSLFNVKAIVELAQYHYSAAIVSAQEYLRLSPNEPN---AHDTLGMTYQQ 497 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 + S + V +G Y + Sbjct: 498 A--------GKLYQAIAEFSAALSLDPEFEPAI-----------------VHMGDVYFQA 532 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMAR----LVEAYVALALMDEAREVVSLIQERYPQ 259 G Y AI +++ Y A H + A A + Y + EA + P Sbjct: 533 GRYEEAIQQYR----RYIGAAHTDAARAIGYGNIAAVYRQQQNLKEAAKAAEREIHYDPH 588 Query: 260 GYW 262 W Sbjct: 589 AIW 591 >gi|283956471|ref|ZP_06373951.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 1336] gi|283792191|gb|EFC30980.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 1336] Length = 215 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 70/179 (39%), Gaps = 18/179 (10%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L +F S+ F ++ +Y S ++ Y++ + L++++ KA +++N Sbjct: 7 LLVFLSV---FFNACSTKNDEGLYNLSASEW------YKQIIKDLQDKDLEKADDHYNGM 57 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + + + +L++ A +Y+ A +EY ++ S+N DY+ YL + Sbjct: 58 ASEHIADPLLETTLIILAQAHMDEEEYKLAEFYLDEYNKKFGNSRNADYIRYLKIKAKFD 117 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 +Q + + ++ Y + Y + +T + +YL Sbjct: 118 AFAVPNRNQALMLESQKEIDTFLKDYPYTEYEPLVQTMLTK---------FNLAVFYLN 167 >gi|89094845|ref|ZP_01167778.1| hypothetical protein MED92_08787 [Oceanospirillum sp. MED92] gi|89080900|gb|EAR60139.1| hypothetical protein MED92_08787 [Oceanospirillum sp. MED92] Length = 264 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 56/159 (35%), Gaps = 22/159 (13%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 S++ + + Y +A ++E+N+ KA E F +D+P Sbjct: 116 SVSASAAQPSTGFQPPKPEMVQPDAAPSDAKAYREAFGLVRERNYPKAIEAFTNFIKDYP 175 Query: 89 FAGVARKSLLMSAFVQYSAGK-------YQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + A Y G+ + A + IT + + + Y +G+ Y Sbjct: 176 QSA-------RLANAHYWLGEIYLAEQKPELARESFVQVITNFADHRKAPDAAYKLGIVY 228 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 Q+ ++Y+ ++ +Y +S V+ A+ Sbjct: 229 DQLGDKA--------KSVEYLDMVINKYPDSSAVRLAKE 259 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 39/105 (37%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 ++ + ++ Y S +LA +G YL + A F V Sbjct: 162 KAIEAFTNFIKDYPQSA--------------RLANAHYWLGEIYLAEQKPELARESFVQV 207 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + N++D A +A +L Y L ++ E + ++ +YP Sbjct: 208 ITNFADHRKAPDAAYKLGIVYDQLGDKAKSVEYLDMVINKYPDSS 252 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 22/124 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y +A +I YP+S + +Y +G Y ++ +L + ++ Sbjct: 156 RERNYPKAIEAFTNFIKDYPQSARLANAHYWLGEIYLA--------EQKPELARESFVQV 207 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 + + + A + + + +QL K + EY+ +V+ Y D+ Sbjct: 208 ITNFADHRKAPDAAYKLGIVYDQLGDKAKSV--------EYL------DMVINKYPDSSA 253 Query: 226 AEEA 229 A Sbjct: 254 VRLA 257 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 22/65 (33%) Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + Y AI F + +Y + A L E Y+A + ARE + + Sbjct: 156 RERNYPKAIEAFTNFIKDYPQSARLANAHYWLGEIYLAEQKPELARESFVQVITNFADHR 215 Query: 262 WARYV 266 A Sbjct: 216 KAPDA 220 >gi|183220546|ref|YP_001838542.1| putative cAMP binding protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910656|ref|YP_001962211.1| cAMP-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775332|gb|ABZ93633.1| cAMP-binding protein, regulatory protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778968|gb|ABZ97266.1| Putative cAMP binding protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 351 Score = 52.0 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 44/133 (33%), Gaps = 16/133 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRD-----FPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 Y+KA F+ ++ A + F + S SL + A Y A S Sbjct: 227 YDKASTFMNAGKYADAIDLFKKVSDRTDSVTQEEEQFVENSLFYMGKSSFKAKDYPSAIS 286 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT--NSP 173 +I +YP+ + Y + ++ + Q ++ + +S Sbjct: 287 HFSNFIKRYPKGLLLKENLYHLALATEAS--------GDKEKSKQLFQKVTQMPPMDDSI 338 Query: 174 YVKGARFYVTVGR 186 + A+ + GR Sbjct: 339 -SEDAKSKLKGGR 350 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 63/193 (32%), Gaps = 41/193 (21%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-----MIRDVPYD 151 L+ A V Y G + AA E+YI YP+ +D L+ ++ + I+++ Y Sbjct: 131 LMNVAEVFYKNGNFDHAAYAFEKYIQHYPDGMYLDRAKQLLDLARKKTPFPLTIQELVYK 190 Query: 152 QRATKL-----------MLQYMSRIVERYTNS---------------PYVK--GARFYVT 183 +Q + NS Y V+ Sbjct: 191 PEPGSQTGKLQEMLKTMAVQAPNATSNVDPNSILSQYDKASTFMNAGKYADAIDLFKKVS 250 Query: 184 VGRNQLAAKE--------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + + +E +G+ K +Y +AI F + Y +E + L Sbjct: 251 DRTDSVTQEEEQFVENSLFYMGKSSFKAKDYPSAISHFSNFIKRYPKGLLLKENLYHLAL 310 Query: 236 AYVALALMDEARE 248 A A +++++ Sbjct: 311 ATEASGDKEKSKQ 323 >gi|300722399|ref|YP_003711685.1| hypothetical protein XNC1_1422 [Xenorhabdus nematophila ATCC 19061] gi|297628902|emb|CBJ89485.1| putative periplasmic protein contains a protein prenylyltransferase domain [Xenorhabdus nematophila ATCC 19061] Length = 256 Score = 52.0 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 9/145 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 + + + ++ Y+ AV L + + KA F + +P + + Sbjct: 117 PSAQTGNKQPAASASTGSEKGDYDAAVSLALNTKEYDKAIASFQGFVKTYPKSKYLSNAN 176 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + Y+ GK AA + YP+S+ Y VG+ + ++ Sbjct: 177 YWLGQLNYNKGKKDDAAYYFATVVKNYPKSQKSGDSLYKVGL--------IMQEKGQKDK 228 Query: 158 MLQYMSRIVERYTNSPYVKGARFYV 182 ++V++Y S K A + Sbjct: 229 AKAVYQQVVKQYPGSNAAKMAEKKI 253 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 41/112 (36%), Gaps = 14/112 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + V+ Y S Y+ A +++ +G+ A F V Sbjct: 154 KAIASFQGFVKTYPKSKYLSNANYWLGQLN--------------YNKGKKDDAAYYFATV 199 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + NY ++ + +++ ++ D+A+ V + ++YP A+ E Sbjct: 200 VKNYPKSQKSGDSLYKVGLIMQEKGQKDKAKAVYQQVVKQYPGSNAAKMAEK 251 Score = 40.1 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 24/61 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L EY AI FQ + Y +++ A L + D+A + + + YP+ Sbjct: 147 LNTKEYDKAIASFQGFVKTYPKSKYLSNANYWLGQLNYNKGKKDDAAYYFATVVKNYPKS 206 Query: 261 Y 261 Sbjct: 207 Q 207 >gi|322421504|ref|YP_004200727.1| tetratricopeptide repeat-containing protein [Geobacter sp. M18] gi|320127891|gb|ADW15451.1| Tetratricopeptide repeat [Geobacter sp. M18] Length = 1097 Score = 52.0 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 59/146 (40%), Gaps = 23/146 (15%) Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 +A +L ++ + +YP + D V Y + +Y ++ T+ + M R+V+ + Sbjct: 160 EAIALYQKLLDKYPRYEGNDQVLYQMSRAYEEL--------GQTEDAMAVMQRMVKDFPG 211 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 S Y+ +F Y+ EY+ A ++ ++ + + E A+ Sbjct: 212 SRYINEVQFRR--------------AEYFFTHREYLEAEAVYKSLVDIGPETSYYELALY 257 Query: 232 RLVEAYVALALMDEA-REVVSLIQER 256 +L + L +E ++L+ + Sbjct: 258 KLGWTFYKQELYEEGLNRFIALLDHK 283 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 30/62 (48%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L+RG AI +Q +L Y E ++ + ++ AY L ++A V+ + + +P Sbjct: 153 LERGGAREAIALYQKLLDKYPRYEGNDQVLYQMSRAYEELGQTEDAMAVMQRMVKDFPGS 212 Query: 261 YW 262 + Sbjct: 213 RY 214 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 51/158 (32%), Gaps = 22/158 (13%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E L+ +A + + +P + L + G+ + A ++ + + Sbjct: 147 ETGGEELERGGAREAIALYQKLLDKYPRYEGNDQVLYQMSRAYEELGQTEDAMAVMQRMV 206 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 +P S+ ++ V + + + R +V+ + Y + A + Sbjct: 207 KDFPGSRYINEVQFRRA--------EYFFTHREYLEAEAVYKSLVDIGPETSYYELALYK 258 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 + +Y K+ Y + RF +L + Sbjct: 259 LGWT-------------FY-KQELYEEGLNRFIALLDH 282 Score = 38.9 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 7/72 (9%), Positives = 27/72 (37%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +Y++ +++ A ++F + R + + + +A ++ A ++ Sbjct: 642 AASIYKQGEQANAAKDYRGAADHFLRIGRMAAGSRIRVNAEYDAAVALIQLKDWKGATTV 701 Query: 117 GEEYITQYPESK 128 + +P + Sbjct: 702 LTGFRELFPGHE 713 >gi|332667614|ref|YP_004450402.1| hypothetical protein Halhy_5706 [Haliscomenobacter hydrossis DSM 1100] gi|332336428|gb|AEE53529.1| Tetratricopeptide TPR_1 repeat-containing protein [Haliscomenobacter hydrossis DSM 1100] Length = 1046 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 64/231 (27%), Gaps = 46/231 (19%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC-------SRDFPFAGVAR----KSLLM 99 + Y + +K+ N+ +A +F + +A + L Sbjct: 509 PEESSVATANYIQGYNLIKQDNYERARGFFQAAVDGINRNRGQYRNDKIANNVLGDATLR 568 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + +Y A E I + +S N DY Y + R + Sbjct: 569 LGDSYFKFNQYDNALRYYNEAIDR--KSANFDYAIYQKAIIEGLRGRRT--------EEI 618 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE------------------------VE 195 + R+ + S + A + ++ + Sbjct: 619 VSLERLTRDFPGSEFADDALLRIGQTYQEIGRSNDAIPHLQNLVTKYRGKSPLVNQGFLA 678 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA-LALMDE 245 +G G Y AI ++ V N + A A A L E YV L E Sbjct: 679 LGLINYNAGNYDGAINYYKQVFKNSPEPTEANLARASLEEIYVKDLGKPGE 729 Score = 35.5 bits (81), Expect = 8.5, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 84/245 (34%), Gaps = 40/245 (16%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKS--LLMSAFVQ 104 L YQ+ + + L+ A E + P ++ ++ L V Sbjct: 426 LPPQMQATYQKVAVNRGMQLLQNNENQAAREILQKSLEN--PI-DLSVQAVALFWLGDVA 482 Query: 105 YSAGKYQQAASLGEEY------ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 + YQ++A + + I+ PE +V Y+ G + + + + + Sbjct: 483 HREKNYQESAQYMDRFLGLTRSISNLPEESSVATANYIQGYNLIKQ-DNYERARGFFQAA 541 Query: 159 LQYMSRIVERYTNSPYVK----GARFYVTVGRNQLAAKEVEIGRYY---LKRGE------ 205 + ++R +Y N A + + + RYY + R Sbjct: 542 VDGINRNRGQYRNDKIANNVLGDATLRLGDSYFKFNQYD-NALRYYNEAIDRKSANFDYA 600 Query: 206 -YVAAI------PRFQLVL------ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 Y AI R + ++ ++ +E A++A+ R+ + Y + ++A + Sbjct: 601 IYQKAIIEGLRGRRTEEIVSLERLTRDFPGSEFADDALLRIGQTYQEIGRSNDAIPHLQN 660 Query: 253 IQERY 257 + +Y Sbjct: 661 LVTKY 665 >gi|167648380|ref|YP_001686043.1| tol-pal system protein YbgF [Caulobacter sp. K31] gi|167350810|gb|ABZ73545.1| tol-pal system protein YbgF [Caulobacter sp. K31] Length = 283 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 39/102 (38%), Gaps = 14/102 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 Q + VE + +S AR+++ + R Y A + + Sbjct: 176 AEQAFAGYVEAFPDSAKAPEARYWLGETQ--------------FVREAYGDAAGSYLGAV 221 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + A +A+ +L + VAL +A + + + +RYP+ Sbjct: 222 RGWPQTSWAPDAVLKLSRSLVALKKPADACKTLDELAKRYPK 263 >gi|297170599|gb|ADI21625.1| hypothetical protein [uncultured myxobacterium HF0130_06F04] Length = 1249 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 72/195 (36%), Gaps = 19/195 (9%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 + D R ++ V +F KA +++ +++P + + AF Sbjct: 747 IVDDYPQSPRADGSLFRVGVNAQNFFDFEKALATYSKLVKEYPKSTSRPDAFYNIAFALE 806 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +Y++AA Y +P+ + V + G Y +M D R + Sbjct: 807 QLQQYKKAAKQYLAYCDVFPKRDDAPEVCFRAGEVYEKMD-----DPRLVRKTYLNF--- 858 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 ++RY + R+++ + + + Y K+G RFQ+VL Y+ Sbjct: 859 IKRYWQNE----------KHRDRVVEAHLRVAKSYEKQGNLKQMRKRFQIVLDEYNKKPD 908 Query: 226 AEEAMARLVEAYVAL 240 A+ A+ EA L Sbjct: 909 AKSALY-AAEAEFKL 922 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 69/225 (30%), Gaps = 32/225 (14%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFL------KEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 D + TD+ ++Y FL +A + + P +L Sbjct: 665 DDPNFAANTDLLSSLQLYRTGAQFLVASELATADKHDEASALYVALVDENPTYANCDAAL 724 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 +A + ++ A + + + YP+S D + VG++ + Sbjct: 725 NNAAVSFEKSQRFDSAMKMYQRIVDDYPQSPRADGSLFRVGVNAQNFFD--------FEK 776 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 L S++V+ Y S A + + QL +Y A ++ Sbjct: 777 ALATYSKLVKEYPKSTSRPDAFYNIAFALEQL--------------QQYKKAAKQYLAYC 822 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + + A E R E Y + R+ + + YW Sbjct: 823 DVFPKRDDAPEVCFRAGEVYEKMDDPRLVRKTY----LNFIKRYW 863 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 69/223 (30%), Gaps = 59/223 (26%) Query: 60 VYEKAVLFLKEQNF---SKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYS--------- 106 YE+ V L+E+ A F + ++P ++ + + + Sbjct: 81 YYEQEVRQLEEEQRVSRLSAIRRFQKFIGNYPDGGPYTADAMFRLSELYFERSYDEFLTG 140 Query: 107 AGKYQQAASL-----------------------GEEYITQYPESKNVDYVYYLVGMSYAQ 143 Y A + +T+YP+ + +D YYL+G + Sbjct: 141 QEDYDVAIDAWDPDSGEPEPELPAFRYEPTISMMQRLLTEYPDYRLIDGAYYLLGYCLGE 200 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 Q L+ +V + ++ + I Y+ Sbjct: 201 --------QGEEDRSLEIYQDLVAYHPHTRFGSEVWMR--------------IAEYHFNA 238 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 A+ ++ VL + + ++A+ +L + LA ++A Sbjct: 239 SRLAEALNGYKRVLGD-EASPFFDKALYKLAWTHYRLADPEDA 280 Score = 39.3 bits (91), Expect = 0.56, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 36/131 (27%), Gaps = 24/131 (18%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A ++ + F KA +P A K ++ AA + +I Sbjct: 356 ASIYFDQTLFDKAMPALKLVQERYPLHPDAPKVQEQIITAYERNRDFESAAKERDLFIAS 415 Query: 124 YPES-----------KNVDY-------VYYLVGMSYAQMIR------DVPYDQRATKLML 159 Y + + VDY Y + Y + + ++ + Sbjct: 416 YSDGGEWQLANKENLEAVDYVAGYTQKAMYAASIFYHEQAQVLEEAGNIDLAVENYRKAA 475 Query: 160 QYMSRIVERYT 170 +ERY Sbjct: 476 AGYGDYLERYP 486 >gi|146300002|ref|YP_001194593.1| TPR repeat-containing protein [Flavobacterium johnsoniae UW101] gi|146154420|gb|ABQ05274.1| Tetratricopeptide TPR_2 repeat protein [Flavobacterium johnsoniae UW101] Length = 1004 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 88/233 (37%), Gaps = 46/233 (19%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++E ++ ++ A + ++Q ++ KS+L + Y++ + +QA + ++ Sbjct: 614 LFELGNTYVADKKNDLAIKTYDQLISEYKNGSFTSKSILKQGLIYYNSDRDEQALAKFKK 673 Query: 120 YITQYPESKNV------------------DYVYYLVGM-----SYAQMIRDV------PY 150 ++P++ +Y ++ + + A++ D Y Sbjct: 674 VAAEFPKTPEALEAVSTARLIYVDSGRVDEYASWVKTLDFVSVTDAELDNDTYDAAFKQY 733 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 Q +K + + + ++ + A FY+ YY + E + Sbjct: 734 SQSNSKAAITGFAGYISKFPAGLHALEANFYLAQL-------------YYAEGSETKSVS 780 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI--QERYPQGY 261 +Q V+ +E E+A+ RL + Y+ D+A V+ + + YPQ Sbjct: 781 N-YQYVIEQ-PRSEFTEQALNRLAQIYLKAKDCDKAIPVLVRLESEADYPQNK 831 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 59/201 (29%), Gaps = 44/201 (21%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 + + + KA Y + + Y Y++A S Sbjct: 251 GESYFNLKQYDKAIPYLE----QYAGKKGKWNNTDFYQLGYAYYEQKNYEKAISQFNKII 306 Query: 118 --EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 ++++ Q YY +G+SY + + L E N+ Sbjct: 307 EGKDFVAQN--------AYYHLGLSYLNTGKK--------QEALNAFKNASEMDFNAQIQ 350 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + A A +IG Y L Y + + E LV+ Sbjct: 351 EDAALNY-------AKVSYDIG------NAYQTVPGILLDFLKKYPNNSNRAEVEKLLVD 397 Query: 236 AYVALALMDEAREVVSLIQER 256 +Y++ +E ++L+++ Sbjct: 398 SYIS---TKNYKEALALLEKN 415 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 79/233 (33%), Gaps = 22/233 (9%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 YQ+ ++ + V E N+++A + F + + ++ A +Y Q Sbjct: 421 KAAYQKVLFYRGVELYNELNYTEAGKMFKSAASEQKTPEFTARATFWKAETEYLNDDMQN 480 Query: 113 AASLGEEYITQYPESK----------NVDYVYY------LVGMSYAQMIRDVPYDQRATK 156 A +++ P +K N+ Y Y+ S+ I + D+ + Sbjct: 481 ALLTYKQFAGL-PAAKSTDEYKNINYNIGYTYFKLKEYDQAANSFQAQIDNNKEDK--VR 537 Query: 157 LMLQYMSRIVERYTNSPY--VKGARFYVTVGRNQLAAK-EVEIGRYYLKRGEYVAAIPRF 213 L Y+ R+ NS Y A G++ A + + Y + I Sbjct: 538 LNDSYLRLGDSRFVNSKYTQAMEAYGKAMDGKSVDADYAQFQKALSYGFMSKNDQKISEL 597 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 L Y +E+ ++ + L YVA D A + + Y G + Sbjct: 598 NNFLKMYKKSEYRDDVLFELGNTYVADKKNDLAIKTYDQLISEYKNGSFTSKS 650 >gi|308273189|emb|CBX29792.1| hypothetical protein N47_F14870 [uncultured Desulfobacterium sp.] Length = 679 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 80/228 (35%), Gaps = 34/228 (14%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 + S D + + L LK N +A Y+N+ ++LL Sbjct: 93 KNSYDDAIYKFPSSAFTPDALLSAGNLCLKTNNIGEAMAYYNRVIEKHISPHTTVRALLN 152 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + GKY +A S+ E I + + + +M + + + Sbjct: 153 KGEALFQKGKYPEALSIYEIIIQAHNTDSGNTEAELGIAKTLFEM--------NSFQKSM 204 Query: 160 QYMSRI------VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 ++++ + RY + +A + +G Y + G Y AAI Sbjct: 205 ALLNKLGQNHENIYRYPD-----------------IA---LYLGYNYYQLGNYNAAIKNL 244 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y D++ ++++ +AY A L + A ++ L+ E++P Sbjct: 245 FEYYNIYPDSKVNHLVLSKIGDAYRADKLSESASKIYMLVFEQFPHTE 292 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 58/185 (31%), Gaps = 30/185 (16%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 R + K ++ + +A + + ++ L A + +Q++ Sbjct: 145 TTVRALLNKGEALFQKGKYPEALSIYEIIIQAHNTDSGNTEAELGIAKTLFEMNSFQKSM 204 Query: 115 SLGEEYITQYPESKNV----DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +L +N+ D YL G +Y Q+ ++ + Y Sbjct: 205 ALLN---KLGQNHENIYRYPDIALYL-GYNYYQL--------GNYNAAIKNLFEYYNIYP 252 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 +S N L +IG Y +A + LV + E A+ ++ Sbjct: 253 DSK------------VNHLVLS--KIGDAYRADKLSESASKIYMLVFEQFPHTEGAQISL 298 Query: 231 ARLVE 235 RL E Sbjct: 299 TRLAE 303 >gi|322493689|emb|CBZ28979.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 847 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 25/209 (11%), Positives = 55/209 (26%), Gaps = 40/209 (19%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + ++ +A + +N+++A E + PF G +A Sbjct: 444 KALFNRAFCEDRLKNYTRAIEDYTAALDLDPRNPFTHY------NLGISYDHKGSPARAL 497 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 I + + Q A + + + Sbjct: 498 QAFTRAIELDDRHPD-----------FFHNRGFTQRKQGAYAAAIADYTTAISLDPKH-- 544 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYS 221 + + ++L E + Y Y RG +A + R + + +++ Sbjct: 545 -FKSHYNRAYCFSKLGRYEEAVAGYAAALQIVSDNANAYHNRGAALAKLGRLEAAVEDFN 603 Query: 222 DA----EHAEEAMARLVEAYVALALMDEA 246 A A+ Y L D+A Sbjct: 604 SALRLNPKLAFALNARGLVYDQLQQYDKA 632 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 63/222 (28%), Gaps = 54/222 (24%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQQA 113 Y +A F K + +A + A + + +A + G+ + A Sbjct: 549 YNRAYCFSKLGRYEEAVAGYAA----------ALQIVSDNANAYHNRGAALAKLGRLEAA 598 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + P + + G+ Y Q+ + L + + + Sbjct: 599 VEDFNSALRLNP---KLAFALNARGLVYDQL--------QQYDKALADFTEAIRL--DQR 645 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKR-------GEYVAAIPRF 213 + E+ I Y Y R G Y AAI + Sbjct: 646 NPAWLHNR-GYTYRNMGELELAIADYSASIKLAPHSHTAYTNRAFAFRKLGRYEAAIEDY 704 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQ 254 VL + + + + + L+L ++A R+ ++ Sbjct: 705 TKVLCEHPGVQ--TKVLNNRAYCFARLSLFEDAIRDYTEVLA 744 >gi|283954637|ref|ZP_06372155.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 414] gi|283793829|gb|EFC32580.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 414] Length = 208 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 58/146 (39%), Gaps = 9/146 (6%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 E Y++ + L++++ KA +++N + + + +L++ A +Y+ A Sbjct: 23 SASEWYKQIIKDLQDKDLEKADDHYNGMASEHVADPLLETTLIILAQAHMDEEEYKLAEF 82 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 +EY ++ S+N DY+ YL + +Q + + ++ Y + Y Sbjct: 83 YLDEYNKKFGNSRNADYIRYLKIKAKFDAFAVPNRNQALMLESQKEIDTFLKDYPYTEYE 142 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYL 201 + +T + +YL Sbjct: 143 PLVQTMLTK---------FNLAVFYL 159 >gi|213622630|ref|ZP_03375413.1| hypothetical protein SentesTyp_36026 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 116 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 37/112 (33%), Gaps = 8/112 (7%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A F + +P + + + Y+ GK AA + YP+S Sbjct: 13 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADA 72 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 Y VG+ + D+ T +++ +Y + K A+ + Sbjct: 73 MYKVGV--------IMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQKRLNAM 116 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 41/118 (34%), Gaps = 14/118 (11%) Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D+ + +++Y +S Y A +++ +G+ A Sbjct: 8 DKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLN--------------YNKGKKDDAA 53 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 F V+ NY + A +AM ++ +A+ V + +YP A+ + Sbjct: 54 YYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQK 111 Score = 43.2 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 22/123 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + +I +YP+S Y +G + Y + +V+ Y Sbjct: 13 DDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDD--------AAYYFASVVKNYP 64 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 SP A + V V +G+ A +Q V+ Y + A++A Sbjct: 65 KSPKAADAMYKVGVIMQ--------------DKGDTAKAKAVYQQVINKYPGTDGAKQAQ 110 Query: 231 ARL 233 RL Sbjct: 111 KRL 113 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 27/74 (36%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y L + A YF +++P + A ++ + G +A ++ ++ Sbjct: 37 YWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQV 96 Query: 121 ITQYPESKNVDYVY 134 I +YP + Sbjct: 97 INKYPGTDGAKQAQ 110 >gi|116751468|ref|YP_848155.1| sporulation domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116700532|gb|ABK19720.1| Sporulation domain protein [Syntrophobacter fumaroxidans MPOB] Length = 538 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 62/210 (29%), Gaps = 30/210 (14%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQC 83 T+ + I V + + Y ++ + EVY VL+ + +A F + Sbjct: 70 TLLYYIGVAYSGRNMHAEALSYYQKALAEKPDYPEVYNAMGVLYAGRGQYDQAQAAFQKV 129 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 PF + + V G Q A +E P +S+ + Sbjct: 130 LAS-PFYETPQFARYNLGLVYEKKGDQQAALQQYQEAARLQPTH----------ALSHHR 178 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 + Q + + ++ + LA + G Sbjct: 179 TAMILEA-QGRAGEAQKEFAMALQYSPD-----------------LAEAHMHYGILCFGT 220 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 G++ A+ F V+ + A+EA L Sbjct: 221 GDFDTAVHSFARVIRLMPNTVEADEARKYL 250 >gi|237736850|ref|ZP_04567331.1| predicted protein [Fusobacterium mortiferum ATCC 9817] gi|229420712|gb|EEO35759.1| predicted protein [Fusobacterium mortiferum ATCC 9817] Length = 492 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 58/149 (38%), Gaps = 17/149 (11%) Query: 40 RQSSRDVYLDSVTDVRYQREV---YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVA 93 +SS V + + + +E+ +++N+ +A YF + +++ Sbjct: 345 TESSNTVVTPENLEAQNYTQYLTFFEEGKKNFEKENYVEAALYFEKALEIDKNY---IEK 401 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 + + Y +A + + + + +YY +GM+Y ++ + Sbjct: 402 KDIYFYLGQSYFRTENYSEAVNDYKNSLNLEKNDEKKAEIYYNIGMAYNKLGDN------ 455 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + + Y++ + + Y NSP+ + Y+ Sbjct: 456 --EQAVNYLTYVRQNYKNSPWSVKSSLYL 482 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 44/110 (40%), Gaps = 5/110 (4%) Query: 159 LQYMSRIVERYTNSPYVKGA---RFYVTVGRNQLAAKE--VEIGRYYLKRGEYVAAIPRF 213 L + + + YV+ A + + +N + K+ +G+ Y + Y A+ + Sbjct: 366 LTFFEEGKKNFEKENYVEAALYFEKALEIDKNYIEKKDIYFYLGQSYFRTENYSEAVNDY 425 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + L + E E + AY L ++A ++ +++ Y W+ Sbjct: 426 KNSLNLEKNDEKKAEIYYNIGMAYNKLGDNEQAVNYLTYVRQNYKNSPWS 475 >gi|90426218|ref|YP_534588.1| hypothetical protein RPC_4747 [Rhodopseudomonas palustris BisB18] gi|90108232|gb|ABD90269.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 323 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 30/133 (22%), Gaps = 22/133 (16%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 K Y A ++ +P Y +G S+ Q Sbjct: 198 TPKDEFDLGIGYMQRKDYALAEETMRNFVKNHPGDPLTADSQYWLGESFFQR-------- 249 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + + + + +Y S A + L KE AA Sbjct: 250 QLYRDAAEAFLAVTTKYDTSAKAPDALLRLGQSLAALKEKE--------------AACAA 295 Query: 213 FQLVLANYSDAEH 225 V Y A Sbjct: 296 LGEVTRKYPRASS 308 Score = 39.3 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 14/110 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 ++ L + M V+ + P +++++ G + +R Y A Sbjct: 212 RKDYALAEETMRNFVKNHPGDPLTADSQYWL--------------GESFFQRQLYRDAAE 257 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 F V Y + A +A+ RL ++ AL + A + + +YP+ Sbjct: 258 AFLAVTTKYDTSAKAPDALLRLGQSLAALKEKEAACAALGEVTRKYPRAS 307 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 14/126 (11%), Positives = 42/126 (33%), Gaps = 14/126 (11%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 L ++ ++ ++ + +++ ++++ A E ++ P + S + Sbjct: 190 LTTLPPSATPKDEFDLGIGYMQRKDYALAEETMRNFVKNHPGDPLTADSQYWLGESFFQR 249 Query: 108 GKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y+ A E ++ Y S +G S A + + + + Sbjct: 250 QLYRDA---AEAFLAVTTKYDTSAKAPDALLRLGQSLAAL--------KEKEAACAALGE 298 Query: 165 IVERYT 170 + +Y Sbjct: 299 VTRKYP 304 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 28/83 (33%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 R+ + D Y F + Q + A E F + + + A +LL Sbjct: 223 RNFVKNHPGDPLTADSQYWLGESFFQRQLYRDAAEAFLAVTTKYDTSAKAPDALLRLGQS 282 Query: 104 QYSAGKYQQAASLGEEYITQYPE 126 + + + A + E +YP Sbjct: 283 LAALKEKEAACAALGEVTRKYPR 305 >gi|95929126|ref|ZP_01311871.1| hypothetical protein Dace_2776 [Desulfuromonas acetoxidans DSM 684] gi|95135027|gb|EAT16681.1| hypothetical protein Dace_2776 [Desulfuromonas acetoxidans DSM 684] Length = 290 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 25/68 (36%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A E ++ +A + + +P A ++ L A A ++Q + I Sbjct: 31 ADSLFNEGDYFRAITEYKRYLYTYPDTPAAARAQLNIARSYLQAERWQDGEFALQRVIDN 90 Query: 124 YPESKNVD 131 YP S D Sbjct: 91 YPNSDEAD 98 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 8/79 (10%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A ++ G Y +A + + Y+ YP++ + SY Q R + Sbjct: 31 ADSLFNEGDYFRAITEYKRYLYTYPDTPAAARAQLNIARSYLQAER--------WQDGEF 82 Query: 161 YMSRIVERYTNSPYVKGAR 179 + R+++ Y NS AR Sbjct: 83 ALQRVIDNYPNSDEADIAR 101 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 24/69 (34%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 G+Y AI ++ L Y D A A + +Y+ + + + + YP Sbjct: 35 FNEGDYFRAITEYKRYLYTYPDTPAAARAQLNIARSYLQAERWQDGEFALQRVIDNYPNS 94 Query: 261 YWARYVETL 269 A L Sbjct: 95 DEADIARIL 103 Score = 35.5 bits (81), Expect = 9.0, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 36/103 (34%), Gaps = 14/103 (13%) Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 D +++ + R + Y ++P A+ + I R YL+ + Sbjct: 32 DSLFNEGDYFRAITEYKRYLYTYPDTPAAARAQ--------------LNIARSYLQAERW 77 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 Q V+ NY +++ A+ A +E+ A + Sbjct: 78 QDGEFALQRVIDNYPNSDEADIARILSIESAFKQGKPTVALQT 120 >gi|302338251|ref|YP_003803457.1| Crp/Fnr family transcriptional regulator [Spirochaeta smaragdinae DSM 11293] gi|301635436|gb|ADK80863.1| putative transcriptional regulator, Crp/Fnr family [Spirochaeta smaragdinae DSM 11293] Length = 326 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 36/98 (36%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + ++ + Y AV ++ + +A + F + D A K+ ++ G Sbjct: 193 PAREELSNAAKAYYNAVSLHSQEKYQEALKEFQHIASDKGDQEYAAKAAFEIGRCYFALG 252 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 +Y + I YP+ ++ + VG Y + Sbjct: 253 RYDECIRHLSGMIKTYPKHPDLTDALFYVGNCYEKKDD 290 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 47/157 (29%), Gaps = 14/157 (8%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS--YAQMIRDVPYDQRATKLMLQY 161 + K+ QA Y+T YP K D + ++ AQ A + Sbjct: 138 YHRTKKFPQALYAYRRYLTYYPSGKYADEANRNIPLAEQNAQGSTRSSVPVSAAAPAREE 197 Query: 162 MSRIVERYTNS------PYVKGARFYVTVG------RNQLAAKEVEIGRYYLKRGEYVAA 209 +S + Y N+ + A + A EIGR Y G Y Sbjct: 198 LSNAAKAYYNAVSLHSQEKYQEALKEFQHIASDKGDQEYAAKAAFEIGRCYFALGRYDEC 257 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 I ++ Y +A+ + Y +A Sbjct: 258 IRHLSGMIKTYPKHPDLTDALFYVGNCYEKKDDFPKA 294 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 44/125 (35%), Gaps = 22/125 (17%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL---------------AAKEV-EIGRYY 200 L R + Y + Y A + + A +E+ + Y Sbjct: 146 QALYAYRRYLTYYPSGKYADEANRNIPLAEQNAQGSTRSSVPVSAAAPAREELSNAAKAY 205 Query: 201 LK------RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 + +Y A+ FQ + ++ D E+A +A + Y AL DE +S + Sbjct: 206 YNAVSLHSQEKYQEALKEFQHIASDKGDQEYAAKAAFEIGRCYFALGRYDECIRHLSGMI 265 Query: 255 ERYPQ 259 + YP+ Sbjct: 266 KTYPK 270 >gi|149193819|ref|ZP_01870917.1| hypothetical protein CMTB2_02003 [Caminibacter mediatlanticus TB-2] gi|149135772|gb|EDM24250.1| hypothetical protein CMTB2_02003 [Caminibacter mediatlanticus TB-2] Length = 206 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 51/154 (33%), Gaps = 7/154 (4%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 IFF I V F +G S + +T +Y+ + A + Sbjct: 5 IFFIILVLFFLGC---SQKSQIKKGLTANELHSLLYKDVKNNM----LDDADNVLMELEA 57 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 ++P + + LLM + + A ++Y ++ K + + Y Sbjct: 58 NYPNSFYIKDDLLMLFYAHLKNEDFNLAKFYLDQYEKRFASIKEIPWCEYQKIKIDFLAY 117 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 ++ +Q +L+ +Y NS ++ Sbjct: 118 QNAYTNQGKILSLLKKCELYKLKYPNSTFIYEVN 151 >gi|94986554|ref|YP_594487.1| hypothetical protein LI0109 [Lawsonia intracellularis PHE/MN1-00] gi|94730803|emb|CAJ54165.1| uncharacterized protein conserved in bacteria [Lawsonia intracellularis PHE/MN1-00] Length = 247 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 51/124 (41%), Gaps = 8/124 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++++Y+ A+ + ++++ F+Q +P + + +L Y+ K+ A + Sbjct: 127 EQKMYKDALHLYELHKYNESITLFDQFMEKYPKSRLMPNALYWKGENLYAQQKFADAIFM 186 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + YP+ + VGMSY + DQ L + + E Y S V+ Sbjct: 187 FKSVTATYPKHQKASDALLKVGMSYRALG-----DQDNATL---HFRALYEDYPKSTAVQ 238 Query: 177 GARF 180 A+ Sbjct: 239 RAQK 242 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 40/125 (32%), Gaps = 22/125 (17%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y KY ++ +L ++++ +YP+S+ + Y G + + + Sbjct: 138 YELHKYNESITLFDQFMEKYPKSRLMPNALYWKGENLYAQQKFAD--------AIFMFKS 189 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + Y A V + L ++ A F+ + +Y + Sbjct: 190 VTATYPKHQKASDALLKVGMSYRALGDQD--------------NATLHFRALYEDYPKST 235 Query: 225 HAEEA 229 + A Sbjct: 236 AVQRA 240 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 14/113 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + +E+Y S + A ++ N A ++ AI F+ V Sbjct: 145 ESITLFDQFMEKYPKSRLMPNALYWKGE--NLYAQ------------QKFADAIFMFKSV 190 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 A Y + A +A+ ++ +Y AL D A + E YP+ + + L Sbjct: 191 TATYPKHQKASDALLKVGMSYRALGDQDNATLHFRALYEDYPKSTAVQRAQKL 243 >gi|113475981|ref|YP_722042.1| hypothetical protein Tery_2349 [Trichodesmium erythraeum IMS101] gi|110167029|gb|ABG51569.1| TPR repeat [Trichodesmium erythraeum IMS101] Length = 649 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 66/219 (30%), Gaps = 41/219 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + +++ K+ + A NQ + P A + V Y+ GKY A + + I Sbjct: 329 NRGIVYRKQGKYDLALADLNQAIQLNP--KYA-DAYKNRGNVYYNQGKYDLALADYNQAI 385 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P Y G+ Y DQ L + ++ ++ Y A Sbjct: 386 QLNP---KYAEAYNNRGLVYD--------DQGKYDLAIAEFNQAIQLNPKYAY---AYNN 431 Query: 182 VTVGRNQLAAKEVEIGRY--------------------YLKRGEYVAAIPRFQLVLANYS 221 V + ++ + Y YL++G+Y AI + + Sbjct: 432 RGVVYDDQGKYDLALADYNQAIQLNPKYAEAYNNRGGVYLEQGKYDLAIADYNQAIQLNP 491 Query: 222 DAEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQ 259 EA Y D A + I+ PQ Sbjct: 492 K---LAEAYNNRGAVYRKQGKYDLALADYNESIRLNNPQ 527 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 18/117 (15%), Positives = 38/117 (32%), Gaps = 32/117 (27%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYS-------AGKYQQ 112 + +++ ++ + A ++ L A+ Y+ GKY Sbjct: 534 NRGLVYNDQRKYDLALA------------DYSQAIQLNPKDAYAYYNRGNVYDDQGKYDL 581 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 A + + I P+ N YY G++ DQR + + + + Y Sbjct: 582 AIADYSQAIQLNPKYAN---AYYTRGLTN--------KDQRNMEKAISDFEKAADLY 627 Score = 42.4 bits (99), Expect = 0.076, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 50/152 (32%), Gaps = 26/152 (17%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSA 107 + +Y + ++L++ + A +NQ + P L A+ V Sbjct: 456 NPKYAEAYNNRGGVYLEQGKYDLAIADYNQAIQLNP--------KLAEAYNNRGAVYRKQ 507 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 GKY A + E I + + Y G+ Y DQR L L S+ ++ Sbjct: 508 GKYDLALADYNESIRLN--NPQLWLPYNNRGLVY--------NDQRKYDLALADYSQAIQ 557 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y A + + ++ I Y Sbjct: 558 LNPKDAY---AYYNRGNVYDDQGKYDLAIADY 586 >gi|46126035|ref|XP_387571.1| hypothetical protein FG07395.1 [Gibberella zeae PH-1] Length = 473 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 46/155 (29%), Gaps = 35/155 (22%) Query: 59 EVYEKAVLFLKEQNFSKAYEYF-NQCSRD--FPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 E+ K + ++ A +++ ++ P ++ Y A + Sbjct: 5 ELKNKGNKAFQSGDYPSAVDFYSQAIEKNDKEP-TFFTNRAQ-----AYIKTEAYGYAVA 58 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + I P + YY G++ ++R K + V N+ Sbjct: 59 DATKAIELNP---KLVKAYYRRGLAKTAILR--------PKEAIDDFKTCVTLDPNNK-- 105 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 AR + + +++ + AAI Sbjct: 106 -DARLKLEDCKKI------------VRQMAFFAAI 127 >gi|83815402|ref|YP_445160.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855] gi|83756796|gb|ABC44909.1| Tetratricopeptide repeat family [Salinibacter ruber DSM 13855] Length = 990 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 50/144 (34%), Gaps = 17/144 (11%) Query: 96 SLLMSAFVQYSA-GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 + A + A G+ A + + + P+ Y + ++ Q Sbjct: 573 AQYELANALFRAAGRPDSAQTWFRRVLDETPDHPVAPQALYGLAQAH--------RAQGD 624 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGR------NQLAAKEVEIGRYY--LKRGEY 206 T + R+++ + ++P K AR + + ++ + R Y + G + Sbjct: 625 TAAGDEVYRRLIDEHPDTPIAKRAREQLGLATTDEDPERTVSRADSAYARAYEAWRSGRH 684 Query: 207 VAAIPRFQLVLANYSDAEHAEEAM 230 AA+ F V Y + A A+ Sbjct: 685 DAALRAFLKVADAYRETSVAPRAL 708 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 1/77 (1%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A E+ + G +A F+ VL D A +A+ L +A+ A EV Sbjct: 573 AQYELANALF-RAAGRPDSAQTWFRRVLDETPDHPVAPQALYGLAQAHRAQGDTAAGDEV 631 Query: 250 VSLIQERYPQGYWARYV 266 + + +P A+ Sbjct: 632 YRRLIDEHPDTPIAKRA 648 Score = 36.6 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 20/102 (19%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG--RYYLKRGEYVAA 209 Q + +Q + ++ + NS +V A + IG RYY + YV A Sbjct: 90 QSSFGEAIQKSAAVLREHPNSEWVDDAL--------------LLIGRSRYYQQ--NYVGA 133 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 + +F+ +A DAE EA RL + V EA + + Sbjct: 134 VQKFREAIAL--DAEREGEARFRLAQTLVVAGRYREAADALR 173 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 24/77 (31%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 D V Y +A + A F + + + VA ++LL + V + Sbjct: 657 TDEDPERTVSRADSAYARAYEAWRSGRHDAALRAFLKVADAYRETSVAPRALLAAGVVYH 716 Query: 106 SAGKYQQAASLGEEYIT 122 ++ + + Sbjct: 717 RTARHDSSGQGRARFTR 733 >gi|94267784|ref|ZP_01290991.1| hypothetical protein MldDRAFT_2604 [delta proteobacterium MLMS-1] gi|93451862|gb|EAT02601.1| hypothetical protein MldDRAFT_2604 [delta proteobacterium MLMS-1] Length = 109 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 18/36 (50%) Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 LA E+ + +Y+K EY A R +L Y ++ Sbjct: 18 FLARHEMFVATFYVKTKEYQQAEGRLNHLLETYPES 53 >gi|325267811|ref|ZP_08134461.1| hypothetical protein HMPREF9098_2189 [Kingella denitrificans ATCC 33394] gi|324980692|gb|EGC16354.1| hypothetical protein HMPREF9098_2189 [Kingella denitrificans ATCC 33394] Length = 149 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 49/152 (32%), Gaps = 11/152 (7%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + R Y++A + +++A + + +A+ SL Sbjct: 5 PTADKPPARIAPKPASRNSSAAYQEATRLYQAGKYAEAAKLLRD-DGGGDGSELAQSSLH 63 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS-YAQMIRDVPYDQRATKL 157 + Q Q +G+ + ++P+ + Y VG + +D+ D Sbjct: 64 LLLLTQQKLNHCQSIIQIGQRFSRRFPQHPSAADALYAVGECQWKMQQQDIARD------ 117 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 ++ RY + A+ + R+ L Sbjct: 118 ---TWRQLRLRYPKTDAAARAQIRLQSQRSNL 146 >gi|260683054|ref|YP_003214339.1| putative multiprotein complex assembly protein [Clostridium difficile CD196] gi|260686652|ref|YP_003217785.1| putative multiprotein complex assembly protein [Clostridium difficile R20291] gi|260209217|emb|CBA62488.1| putative multiprotein complex assembly protein [Clostridium difficile CD196] gi|260212668|emb|CBE03728.1| putative multiprotein complex assembly protein [Clostridium difficile R20291] Length = 465 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 9/132 (6%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++ + V + ++Y +A+ K + + KA + F +S+ A Sbjct: 330 KNKEPEREITVADEEDLYYQALNLKKNKEYEKAIDNFKSVVSSGKTKKYISESIYQLAIT 389 Query: 104 QYSAGKYQQAASLGEEYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 G +A ++YI Y + D YY +GM Y D K Q Sbjct: 390 NKLLGNKDEAIKYYKKYINTYTKNDQYYDDSYYELGMLYY--------DNGDLKNAQQTF 441 Query: 163 SRIVERYTNSPY 174 + +S Y Sbjct: 442 YSLRSEVPDSMY 453 >gi|327541184|gb|EGF27728.1| repeat protein [Rhodopirellula baltica WH47] Length = 1113 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 28/220 (12%), Positives = 66/220 (30%), Gaps = 43/220 (19%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K + L+ Q +A E F++ P ++ +LL + + + Y Sbjct: 668 YAKGMAELQSQQHERAAESFSELIDQNPDHTLSDDALLSRGIAHRHLNREADSRNDLNAY 727 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVP-----------------------------YD 151 + P N+ + Y + + + V + Sbjct: 728 LDSKPTGNNLGHALYELALLDQNASQTVQAAESLQRIVDEVPDYPDMDKVLYELGWSLRE 787 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 L +++ +Y ++ V A +G+ + + ++ A Sbjct: 788 SGKDDQALTKFEQLIAKYPDNALVADAA--------------YFVGQDHYRNSKWGDAAD 833 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 F++ +D + E+++ RL + EA Sbjct: 834 AFKIAADKSNDLDLKEKSLYRLGWCFYKQQKYAEAEAAFK 873 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 71/224 (31%), Gaps = 36/224 (16%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR------DFPFAGVAR-KS 96 +++ + + Y+ L EQ ++ A EYF PFA A+ + Sbjct: 614 KELIRSNGESRMADQARYKLGQLANGEQQYAAAIEYFEPILASKRDAGLLPFARYAKGMA 673 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L + ++++AA E I Q P+ D G+++ + R+ Sbjct: 674 EL-------QSQQHERAAESFSELIDQNPDHTLSDDALLSRGIAHRHLNREAD------- 719 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 ++ ++ + A + + + + V A Q + Sbjct: 720 -SRNDLNAYLDSKPTGNNLGHALYELALLDQNASQT--------------VQAAESLQRI 764 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + D ++ + L + D+A + +YP Sbjct: 765 VDEVPDYPDMDKVLYELGWSLRESGKDDQALTKFEQLIAKYPDN 808 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 63/196 (32%), Gaps = 35/196 (17%) Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD--- 131 ++ ++ ++ P + + ++ QY+ G+ +A + ++ Sbjct: 150 ESIATYDTLIKEIPDSRLLDRAYFYRGEAQYALGELDKAIESYNAMMKL----DDIASSA 205 Query: 132 ---YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 Y G++ + Q+ ++++ +S V + Sbjct: 206 LRCDALYARGVALEE--------QKNYDQAQSSYQQLLQACADSDLVVDVEIRMGDM--H 255 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA--MARLVEAYVALALMDEA 246 L E++ A+ RF V N +DA ++A R AY +A Sbjct: 256 LLQGEMQN------------AVERFDSVATN-ADATAEDKAYSFFRQGYAYAQDGDPTKA 302 Query: 247 REVVSLIQERYPQGYW 262 + ++PQ + Sbjct: 303 SASYEKLLTQFPQSPY 318 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 12/135 (8%), Positives = 36/135 (26%), Gaps = 17/135 (12%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 S D + + + + A +++ FP + Sbjct: 918 ADNDSAKTVRDKAERQVRELILLHGGQSAAQLGQYEDAIGWYDALRERFPATTYLPQVFY 977 Query: 99 MSAFVQYSAGKYQQAA----SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 F +AG ++A + + + S+ +++G + + Sbjct: 978 EIGFAAQNAGDDEKALKFYSEVADNF-----RSEIAARARFMMGEIHFAN--------KT 1024 Query: 155 TKLMLQYMSRIVERY 169 + R++ + Sbjct: 1025 FDKAIPEFQRVMFGF 1039 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 76/250 (30%), Gaps = 33/250 (13%) Query: 52 TDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D + + Y + + ++ + +KA + + FP + A + L SA Y AG Sbjct: 275 ADATAEDKAYSFFRQGYAYAQDGDPTKASASYEKLLTQFPQSPYAAAATLASAQTLYQAG 334 Query: 109 KYQQAASLGEEYITQYPESKNVD---YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 AAS + + + ++L + RD A K S + Sbjct: 335 DLPGAAS---RFRDVLQGTDPIAATESAHWLARIDLGIANRDPSKTAEAAKSAYDVASEL 391 Query: 166 VERYTNSPYVKGARF-----------YVTVGRNQ------------LAAKEVEIGRYY-L 201 + + + + + Q LA + + + L Sbjct: 392 IAKGPQGSFAVALKLDAAEALSLQPDRLNDAFEQYQSIASEHSDHPLAPRALYNAAFVAL 451 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + G A+ + +S A +A+ EA +A A E + + Sbjct: 452 QLGNTEQAVKLADSFESKFSSDPLAPDALFVGAEALLASGEASSAAERYQTLIDNAKHRD 511 Query: 262 WARYVETLVK 271 + +++ Sbjct: 512 HPQRATWILR 521 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 47/130 (36%), Gaps = 15/130 (11%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D + +Y + V +++N+ +A + Q + + + + + G Sbjct: 200 DIASSALRCDALYARGVALEEQKNYDQAQSSYQQLLQACADSDLVVDVEIRMGDMHLLQG 259 Query: 109 KYQQAASLGEEY--ITQY--PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + Q A E + + +++ Y ++ G +YAQ D + Sbjct: 260 EMQNAV---ERFDSVATNADATAEDKAYSFFRQGYAYAQ-----DGDPT---KASASYEK 308 Query: 165 IVERYTNSPY 174 ++ ++ SPY Sbjct: 309 LLTQFPQSPY 318 Score = 39.3 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 29/215 (13%), Positives = 62/215 (28%), Gaps = 25/215 (11%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + Y + + A + F + + KSL + Y KY Sbjct: 806 PDNALVADAAYFVGQDHYRNSKWGDAADAFKIAADKSNDLDLKEKSLYRLGWCFYKQQKY 865 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVG---MSYAQMIRDVPYDQRATKLMLQYM---SR 164 +A + + YV G + MI + + Q + L+ Sbjct: 866 AEAEAAFKR-----------QYVEVQQGGLLLDSMMMIGESRFKQEQYETALRAYTKARE 914 Query: 165 IVERYTNSPYV--KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 +E +S A V + G+ + G+Y AI + + + Sbjct: 915 KIEADNDSAKTVRDKAERQVRELIL------LHGGQSAAQLGQYEDAIGWYDALRERFPA 968 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + + + A ++A + S + + + Sbjct: 969 TTYLPQVFYEIGFAAQNAGDDEKALKFYSEVADNF 1003 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 37/97 (38%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T +YE A+L +A E + + P K L + +GK Sbjct: 731 KPTGNNLGHALYELALLDQNASQTVQAAESLQRIVDEVPDYPDMDKVLYELGWSLRESGK 790 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 QA + E+ I +YP++ V Y VG + + + Sbjct: 791 DDQALTKFEQLIAKYPDNALVADAAYFVGQDHYRNSK 827 >gi|304312903|ref|YP_003812501.1| hypothetical protein HDN1F_32850 [gamma proteobacterium HdN1] gi|301798636|emb|CBL46868.1| Conserved hypothetical protein [gamma proteobacterium HdN1] Length = 314 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 47/135 (34%), Gaps = 12/135 (8%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--K 109 ++ Y A+ +K + + KA P + + + + A Sbjct: 187 PATEEEKRAYTLALDNVKSKQYQKAISQLESLLTTAPNSQIVPNAHYWLGELYMVAQPTD 246 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +A + +E + Y ++ V + +G +S + D Y +R+++ Sbjct: 247 LDRAKAHFQELLKYYADNPKVPDALFKLGKLSALRGEND---------RAKLYFNRVIKE 297 Query: 169 YTNSPYVKGARFYVT 183 + ++ A+ Y+ Sbjct: 298 FPDTQAATLAKDYLR 312 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 22/131 (16%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA-QMIRDVPYDQRATKLMLQYMSR 164 + +YQ+A S E +T P S+ V +Y +G Y D+ + Sbjct: 204 KSKQYQKAISQLESLLTTAPNSQIVPNAHYWLGELYMVAQPTDLDR-------AKAHFQE 256 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +++ Y ++P V A F + E + + Y R V+ + D + Sbjct: 257 LLKYYADNPKVPDALFKLGKLSAL--RGENDRAKLYFNR------------VIKEFPDTQ 302 Query: 225 HAEEAMARLVE 235 A A L Sbjct: 303 AATLAKDYLRR 313 Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 42/119 (35%), Gaps = 12/119 (10%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + + + + ++ NS V A +++ +++ + Sbjct: 206 KQYQKAISQLESLLTTAPNSQIVPNAHYWLGELYMVAQPTDLDRAK------------AH 253 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 FQ +L Y+D +A+ +L + D A+ + + + +P A + ++ Sbjct: 254 FQELLKYYADNPKVPDALFKLGKLSALRGENDRAKLYFNRVIKEFPDTQAATLAKDYLR 312 >gi|118401580|ref|XP_001033110.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89287457|gb|EAR85447.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 3068 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 69/216 (31%), Gaps = 38/216 (17%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 +N+ A E + ++ ++L A Y+ + A ++ + P+ N Sbjct: 2799 ENYDTAIEKYENLLKN----KQDDEALQYLADCYYTKDDVENAIYYYKQCLEINPKRPN- 2853 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYVKGARFYVTV--GR 186 Y +G +Y Q + Q ++ T S Y A Y Sbjct: 2854 --CLYNLGNAY--------CTQNNYEEAQQAYIECIQLDTTNASAYYNLANVYYIQNDYE 2903 Query: 187 NQLAAKEV-------------EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 N L E+ I Y+ ++ AI Q +L Y D + +L Sbjct: 2904 NALINFELAIEKDPSNVEWRNYIAGLYIDNNQFDKAI---QHLLKAYDDGTSNFDTCFKL 2960 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 +AY + EAR+ + + E P L Sbjct: 2961 AQAYYGQQNLSEARQYIKVAVEIDPDND---DAYRL 2993 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 36/184 (19%) Query: 64 AVLFLKE-QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 ++L + N ++A + F Q P + K+ S ++ AA ++ I+ Sbjct: 2689 GKIYLNKLNNINRAIDCFKQIISIEP--KYS-KAHFQLGMAYQSRKDFKLAAECFKQCIS 2745 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 P + + Q + + + T+ L Y + + N Sbjct: 2746 INPNNADA-----------WQQLGTIFQETGNTEKALMYFQKGLVFNPN----------- 2783 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 + K I Y Y AI +++ +L N D +EA+ L + Y Sbjct: 2784 ----DFQLQK--GIANCYYFTENYDTAIEKYENLLKNKQD----DEALQYLADCYYTKDD 2833 Query: 243 MDEA 246 ++ A Sbjct: 2834 VENA 2837 >gi|50546124|ref|XP_500589.1| YALI0B06963p [Yarrowia lipolytica] gi|49646455|emb|CAG82820.1| YALI0B06963p [Yarrowia lipolytica] Length = 479 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 44/148 (29%), Gaps = 27/148 (18%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQA 113 ++ + L +++ A + + Q P + A ++ Y A Sbjct: 2 SAEDLKNQGNKALLSGHYNDAVDLYTQAIELNPQSAVYYANRAQ-----AHIKNEAYGVA 56 Query: 114 ASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + I P Y Y+ +S +I+ K L ++V+ Sbjct: 57 IEDSSKAIELDPT-----YIKAYFRRAVSNTAIIKH--------KDALVDFKKVVQLAPG 103 Query: 172 SPYVKGARFYVTVGRN--QLAAKEVEIG 197 A+ + + + AA + I Sbjct: 104 D---NAAKQRLNECQKLVRKAAFALAIA 128 >gi|255100464|ref|ZP_05329441.1| putative multiprotein complex assembly protein [Clostridium difficile QCD-63q42] gi|255306404|ref|ZP_05350575.1| putative multiprotein complex assembly protein [Clostridium difficile ATCC 43255] Length = 463 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 9/132 (6%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++ + V + ++Y +A+ K + + KA + F +S+ A Sbjct: 328 KNKEPEREITVADEEDLYYQALNLKKNKEYEKAIDNFKSVVSSGKTKKYISESIYQLAIT 387 Query: 104 QYSAGKYQQAASLGEEYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 G +A ++YI Y + D YY +GM Y D K Q Sbjct: 388 NKLLGNKDEAIKYYKKYINTYTKNDQYYDDSYYELGMLYY--------DNGDLKNAQQTF 439 Query: 163 SRIVERYTNSPY 174 + +S Y Sbjct: 440 YSLRSEVPDSMY 451 >gi|282891878|ref|ZP_06300357.1| hypothetical protein pah_c200o023 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498138|gb|EFB40478.1| hypothetical protein pah_c200o023 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 322 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 4/160 (2%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + +++ + P +A K+L + ++++ I ++P+ + Y Sbjct: 143 ALQIYDEVTAAMPSQDIAAKALYCKGLYLWELKDFRESVDSFYLLIRRFPKHELAPESY- 201 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYM--SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 V +S + + Q L + + + + V + A Sbjct: 202 -VAISRVYLEQSAVELQNPDILAFADVNKRKFERDFPGEERLLEVEANVLKIKEIYAHGL 260 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 E G +Y ++G AAI +Q +A + E AE RL Sbjct: 261 FETGSFYERKGHPKAAIIYYQNTIAKFPGTEIAERCRKRL 300 >gi|254974992|ref|ZP_05271464.1| putative multiprotein complex assembly protein [Clostridium difficile QCD-66c26] gi|255092380|ref|ZP_05321858.1| putative multiprotein complex assembly protein [Clostridium difficile CIP 107932] gi|255314120|ref|ZP_05355703.1| putative multiprotein complex assembly protein [Clostridium difficile QCD-76w55] gi|255516798|ref|ZP_05384474.1| putative multiprotein complex assembly protein [Clostridium difficile QCD-97b34] gi|255649899|ref|ZP_05396801.1| putative multiprotein complex assembly protein [Clostridium difficile QCD-37x79] Length = 463 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 9/132 (6%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++ + V + ++Y +A+ K + + KA + F +S+ A Sbjct: 328 KNKEPEREITVADEEDLYYQALNLKKNKEYEKAIDNFKSVVSSGKTKKYISESIYQLAIT 387 Query: 104 QYSAGKYQQAASLGEEYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 G +A ++YI Y + D YY +GM Y D K Q Sbjct: 388 NKLLGNKDEAIKYYKKYINTYTKNDQYYDDSYYELGMLYY--------DNGDLKNAQQTF 439 Query: 163 SRIVERYTNSPY 174 + +S Y Sbjct: 440 YSLRSEVPDSMY 451 >gi|322433062|ref|YP_004210311.1| hypothetical protein protein [Acidobacterium sp. MP5ACTX9] gi|321165289|gb|ADW70993.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium sp. MP5ACTX9] Length = 750 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 18/124 (14%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 R +Y +A++ + +A + + FP + A + F Y KY Sbjct: 575 GKDNARALYYRALVERNQGQVDEAIVDLQKVAAQFPRSRDAHR---ELGFSYYQQHKYPL 631 Query: 113 AASLGEEYITQYPESKNVDY---VYYLV-GM--------SYAQMIRDVPYDQRATKLMLQ 160 A + E + P+ Y + Y G+ +Y +D D A+ L+ Sbjct: 632 ARAEYETVQSIDPDDLAAHYNLAILYRRLGLKDKATEQAAYFADQKD---DPTASVYALE 688 Query: 161 YMSR 164 Y+ + Sbjct: 689 YLRK 692 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 66/190 (34%), Gaps = 34/190 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + L Q ++ + F ++ P A + + ++Q+ KY +A E+ + Sbjct: 516 NYGIGLLDAQQYAGSVAAFEHVAKLRPDYPDAP-TNIGLTYIQW--EKYDEAMPYIEKSL 572 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 K+ Y + V +Q + + ++ ++ S Sbjct: 573 AL---GKDNARALYYRAL--------VERNQGQVDEAIVDLQKVAAQFPRSRD------- 614 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 A +E+ G Y ++ +Y A ++ V + D A +A L Y L Sbjct: 615 --------AHREL--GFSYYQQHKYPLARAEYETVQSIDPDDLAAHYNLAIL---YRRLG 661 Query: 242 LMDEAREVVS 251 L D+A E + Sbjct: 662 LKDKATEQAA 671 >gi|126699042|ref|YP_001087939.1| putative multiprotein complex assembly protein [Clostridium difficile 630] gi|115250479|emb|CAJ68303.1| putative TPR repeat-containing protein [Clostridium difficile] Length = 452 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 9/132 (6%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++ + V + ++Y +A+ K + + KA + F +S+ A Sbjct: 317 KNKEPEREITVADEEDLYYQALNLKKNKEYEKAIDNFKSIVSSGKTKKYISESIYQLAIT 376 Query: 104 QYSAGKYQQAASLGEEYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 G +A ++YI Y + D YY +GM Y D K Q Sbjct: 377 NKLLGNKDEAIKYYKKYINTYTKNDQYYDDSYYELGMLYY--------DNGDLKNAQQTF 428 Query: 163 SRIVERYTNSPY 174 + +S Y Sbjct: 429 YSLRSEVPDSMY 440 >gi|315932209|gb|EFV11152.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 327] Length = 217 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 59/157 (37%), Gaps = 9/157 (5%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 D E Y++ + L++++ KA +++N + + + +L++ A Sbjct: 22 TKNDEGLYNLSASEWYKQIIKDLQDKDLEKADDHYNGMASEHVADPLLETTLIILAQAHM 81 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +Y+ A +EY ++ S+N DY+ YL + +Q + + Sbjct: 82 DEEEYKLAEFYLDEYNKKFGNSRNADYIRYLKIKAKFDAFAVPNRNQALMLESQKEIDTF 141 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 ++ Y + Y + +T + +YL Sbjct: 142 LKDYPYTEYEPLVQTMLTK---------FNLAVFYLN 169 >gi|220918558|ref|YP_002493862.1| TPR repeat-containing protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219956412|gb|ACL66796.1| TPR repeat-containing protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 1191 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 56/143 (39%), Gaps = 29/143 (20%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +QA +L + I++YP +D V Y +G + ++ R+ P L+ +++++ Sbjct: 160 EQAVALYKAIISRYPSYPRLDEVLYFLGENLSRRDRNDP-------DALKAYRALIQKFP 212 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-------GEYVAAIPRFQLVLANYSDA 223 +S YV A + G YY +R G A+ ++ Y ++ Sbjct: 213 SSRYVPDAW--------------MAFGEYYFERANKNDRNGNLRKALESYRKAAE-YQES 257 Query: 224 EHAEEAMARLVEAYVALALMDEA 246 A+ + + L EA Sbjct: 258 SVYGYALYKQGWVHYNLGNWSEA 280 Score = 39.7 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 29/74 (39%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D T Y +V +++ +A E Q + +P +A KSL +A + Sbjct: 703 DWPTSRLAPTAYYNASVDYVRAHRLDRAMEIREQFLQRYPTHTLAPKSLYDNAEAYEAVA 762 Query: 109 KYQQAASLGEEYIT 122 + +AA E Y Sbjct: 763 DFGRAADHYERYFQ 776 Score = 35.9 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 69/208 (33%), Gaps = 29/208 (13%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 ++ Y+ A L + F +A + F + + D P +A S + G Sbjct: 582 QPRGEKWVEVAYKLANLHYRHNAFGEASDLFTRIALDHPQHELAGYSANLVLDAYNLLGD 641 Query: 110 YQQAASLGEEY------ITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 ++ + + I +P+ K+ + V S ++I + Q QY+ Sbjct: 642 WRNVNGWAKRFYDNRALIAAHPQLKDDLSRVIEQ---SAFKVIEEKEKAQDFVGAAEQYL 698 Query: 163 SRIVERYTNSPYVKGA--RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 + + S A V R + +EI R ++ L Y Sbjct: 699 A-FARDWPTSRLAPTAYYNASVDYVRAHRLDRAMEI------REQF----------LQRY 741 Query: 221 SDAEHAEEAMARLVEAYVALALMDEARE 248 A +++ EAY A+A A + Sbjct: 742 PTHTLAPKSLYDNAEAYEAVADFGRAAD 769 >gi|156342046|ref|XP_001620860.1| hypothetical protein NEMVEDRAFT_v1g222634 [Nematostella vectensis] gi|156206260|gb|EDO28760.1| predicted protein [Nematostella vectensis] Length = 1124 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 75/206 (36%), Gaps = 35/206 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y++ ++ +A + + S D K+ L+ Y GKY++A +E Sbjct: 682 YQQGKYEEARGHYKEALRLYQKTSDDQGQG----KAHLLIGNTHYQQGKYEEAIGHYKEA 737 Query: 121 ITQYPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + Y ++ + D + L+G ++ Q + + K L+ + S Sbjct: 738 LRLYQKTSD-DQGQGKAHLLIGNTHYQQGK-YEEARGHYKEALRLYQK------TSDDQG 789 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE---EAMARL 233 + ++ IG + ++G+Y AI ++ L Y + EA + Sbjct: 790 QGKAHLL------------IGNTHYQQGKYEEAIGHYKEALRLYQKTSDDQGQGEAHLLI 837 Query: 234 VEAYVALALMDEA----REVVSLIQE 255 + +EA +E + L Q+ Sbjct: 838 GNTHYQQGKYEEAIGHYKEALRLYQK 863 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 59/168 (35%), Gaps = 27/168 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR---KSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ + +A ++ + R + + K+ L+ Y GKY++A +E Sbjct: 718 GNTHYQQGKYEEAIGHYKEALRLYQKTSDDQGQGKAHLLIGNTHYQQGKYEEARGHYKEA 777 Query: 121 ITQYPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + Y ++ + D + L+G ++ Q Q + + + + Y + Sbjct: 778 LRLYQKTSD-DQGQGKAHLLIGNTHYQ--------QGKYEEAIGHYKEALRLYQKT--SD 826 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + IG + ++G+Y AI ++ L Y Sbjct: 827 DQGQ---------GEAHLLIGNTHYQQGKYEEAIGHYKEALRLYQKTS 865 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 75/206 (36%), Gaps = 34/206 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR---KSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ + +A ++ + R + + K+ L+ Y GKY++A +E Sbjct: 878 GNTHNQQGKYEEAIGHYKEALRLYQKTSDDQGQGKAHLLIGNTHYQQGKYEEAIGHSKEA 937 Query: 121 ITQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-SPYVK 176 + Y ++ + + L+G ++ Q Q + + + + Y S Sbjct: 938 LRLYQKTSDDQGQGEAHLLIGKTHYQ--------QGKYEEAIGHYKEALRLYQKTSDDQG 989 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE---EAMARL 233 + ++ IG + ++G+Y AI ++ L Y + EA + Sbjct: 990 QGKAHLL------------IGDIHYQQGKYEEAIGHYKEALRLYQKTSDDQGQGEAHLLI 1037 Query: 234 VEAYVALALMDEA----REVVSLIQE 255 + + +EA +E + L Q+ Sbjct: 1038 GKTHYHQGKYEEAIGHYKEALRLYQK 1063 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 58/168 (34%), Gaps = 27/168 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR---KSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ + +A ++ + R + + K+ L+ + Y GKY++A +E Sbjct: 958 GKTHYQQGKYEEAIGHYKEALRLYQKTSDDQGQGKAHLLIGDIHYQQGKYEEAIGHYKEA 1017 Query: 121 ITQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-SPYVK 176 + Y ++ + + L+G ++ Q + + + + Y S Sbjct: 1018 LRLYQKTSDDQGQGEAHLLIGKTHYH--------QGKYEEAIGHYKEALRLYQKTSDDQG 1069 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + ++ IG + ++G+Y A + L Y Sbjct: 1070 QGKAHLL------------IGETHYQQGKYEEARGHSKEALRLYQKTS 1105 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 68/193 (35%), Gaps = 31/193 (16%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ ++ +A + + S D + L+ Y GKY++A +E + Sbjct: 603 QQGKYEEARGHYKEALRLYQKTSDDQGQGE----AHLLIGNTHYQQGKYEEAIGHYKEAL 658 Query: 122 TQYPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 Y ++ + D + L+G ++ Q + + K L+ + S Sbjct: 659 RLYQKTSD-DQGQGKAHLLIGNTHYQQGK-YEEARGHYKEALRLYQK------TSDDQGQ 710 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE---EAMARLV 234 + ++ IG + ++G+Y AI ++ L Y + +A + Sbjct: 711 GKAHLL------------IGNTHYQQGKYEEAIGHYKEALRLYQKTSDDQGQGKAHLLIG 758 Query: 235 EAYVALALMDEAR 247 + +EAR Sbjct: 759 NTHYQQGKYEEAR 771 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 71/189 (37%), Gaps = 30/189 (15%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVAR---KSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 ++ + +A ++ + R + + K+ L+ Y GKY++A +E + Y Sbjct: 403 QQGKYEEAIGHYKEALRLYQKTSDDQGQGKANLLIGKTHYQQGKYEEAIGHYKEALRLYQ 462 Query: 126 ESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 ++ + D + L+G ++ Q + + K L+ + S + + Sbjct: 463 KTSD-DQGQGKAHLLIGNTHDQQGK-YEEARGHYKEALRLYQK------TSDDQGQGKAH 514 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE---EAMARLVEAYV 238 + IG + ++G+Y AI ++ L Y + EA + + + Sbjct: 515 LL------------IGNTHDQQGKYEEAIGHYKEALRLYQKTSDDQGQGEAHLLIGKTHY 562 Query: 239 ALALMDEAR 247 +EAR Sbjct: 563 QQGKYEEAR 571 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 69/190 (36%), Gaps = 22/190 (11%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARK--SLLMSAFVQYSAGKYQQAASLGEEY 120 ++ + +A + + R + + + + L+ Y GKY++A +E Sbjct: 918 GNTHYQQGKYEEAIGHSKEALRLYQKTSDDQGQGEAHLLIGKTHYQQGKYEEAIGHYKEA 977 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + Y ++ + D G ++ +I D+ Y Q + + + + Y + Sbjct: 978 LRLYQKTSD-DQGQ---GKAHL-LIGDIHYQQGKYEEAIGHYKEALRLYQKT--SDDQGQ 1030 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE---EAMARLVEAY 237 + IG+ + +G+Y AI ++ L Y + +A + E + Sbjct: 1031 ---------GEAHLLIGKTHYHQGKYEEAIGHYKEALRLYQKTSDDQGQGKAHLLIGETH 1081 Query: 238 VALALMDEAR 247 +EAR Sbjct: 1082 YQQGKYEEAR 1091 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 58/168 (34%), Gaps = 28/168 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y++ ++ +A + + S D K+ L+ GKY++A +E Sbjct: 562 YQQGKYEEARGHYKEALRLYQKTSDDQGQG----KAHLLIGNTHNQQGKYEEARGHYKEA 617 Query: 121 ITQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-SPYVK 176 + Y ++ + + L+G ++ Q Q + + + + Y S Sbjct: 618 LRLYQKTSDDQGQGEAHLLIGNTHYQ--------QGKYEEAIGHYKEALRLYQKTSDDQG 669 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + ++ IG + ++G+Y A ++ L Y Sbjct: 670 QGKAHLL------------IGNTHYQQGKYEEARGHYKEALRLYQKTS 705 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 77/238 (32%), Gaps = 48/238 (20%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR---KSLLMSAFVQY 105 +S + E+ + + N+ +A + + R + + K+ L+ Sbjct: 263 ESGDERDQAEELMGRGRKYYDMDNYEEAIGHSKEALRLYQKTSDDQGQGKAHLLIGTTHD 322 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 GKY++A +E + Y ++ + D + L+G ++ Q Q + + + Sbjct: 323 QQGKYEEAIGHYKEALRLYQKTSD-DQGQGKAHLLIGNTHDQ--------QGKYEEAIGH 373 Query: 162 MSRIVERYTNSPYVK---GARFYVTVGRNQLAAKEVEIGRY------YLKR--------- 203 + Y + + A + +Q E IG Y Y K Sbjct: 374 YKEALRLYQKTSDDQGQGKAHLLIGNTHDQQGKYEEAIGHYKEALRLYQKTSDDQGQGKA 433 Query: 204 -----------GEYVAAIPRFQLVLANYSDAEHAE---EAMARLVEAYVALALMDEAR 247 G+Y AI ++ L Y + +A + + +EAR Sbjct: 434 NLLIGKTHYQQGKYEEAIGHYKEALRLYQKTSDDQGQGKAHLLIGNTHDQQGKYEEAR 491 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 70/221 (31%), Gaps = 47/221 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ ++ +A + + S D K+ L+ GKY++A +E + Sbjct: 483 QQGKYEEARGHYKEALRLYQKTSDDQGQG----KAHLLIGNTHDQQGKYEEAIGHYKEAL 538 Query: 122 TQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK-- 176 Y ++ + + L+G ++ Q Q + + + Y + + Sbjct: 539 RLYQKTSDDQGQGEAHLLIGKTHYQ--------QGKYEEARGHYKEALRLYQKTSDDQGQ 590 Query: 177 -GARFYVTVGRNQLAAKE--------------------------VEIGRYYLKRGEYVAA 209 A + NQ E + IG + ++G+Y A Sbjct: 591 GKAHLLIGNTHNQQGKYEEARGHYKEALRLYQKTSDDQGQGEAHLLIGNTHYQQGKYEEA 650 Query: 210 IPRFQLVLANYSDAEHAE---EAMARLVEAYVALALMDEAR 247 I ++ L Y + +A + + +EAR Sbjct: 651 IGHYKEALRLYQKTSDDQGQGKAHLLIGNTHYQQGKYEEAR 691 >gi|114776300|ref|ZP_01451345.1| outer membrane protein [Mariprofundus ferrooxydans PV-1] gi|114553130|gb|EAU55528.1| outer membrane protein [Mariprofundus ferrooxydans PV-1] Length = 285 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 50/139 (35%), Gaps = 8/139 (5%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 +D+ ++ Y A L LK + +A FN+ +P + ++ + + Sbjct: 146 VVDTAAQADAEKNAYTAAYLALKSGRYDEAANGFNKQLDLYPKGEYSDQAWYWLGETRLA 205 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 +A + + + YP S + + + D + ++Y R++ Sbjct: 206 QNDGAKALNAFKYVVDHYPSSVKHAAALFKMA--------QISVDNKQPARAIEYYKRLI 257 Query: 167 ERYTNSPYVKGARFYVTVG 185 + + +S + AR + Sbjct: 258 QEHADSDMAEQARAALNAL 276 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 16/114 (14%), Positives = 37/114 (32%), Gaps = 14/114 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 ++ ++ Y Y A +++ R LA + G A+ F+ V Sbjct: 174 EAANGFNKQLDLYPKGEYSDQAWYWLGETR--LAQND----------GA--KALNAFKYV 219 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + +Y + A+ ++ + V A E + + + A + Sbjct: 220 VDHYPSSVKHAAALFKMAQISVDNKQPARAIEYYKRLIQEHADSDMAEQARAAL 273 >gi|149598974|ref|XP_001516420.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 823 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 30/240 (12%), Positives = 76/240 (31%), Gaps = 38/240 (15%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL 98 Q++ L +D + K ++ KA E++ D + +L Sbjct: 468 TQANNYADLAVSSDRYNPSALTNKGNTIFASGDYEKAAEFYKEALRND---SSCTE-ALY 523 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 + +A ++ + +N V Y + + +++ D Sbjct: 524 NIGLTYKKLNRLDEALDC---FLKLHAILRNSAQVLYQIA-NLYEIMEDPN-------QA 572 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVL 217 ++++ +++ A + + K + +YY + Y+ + I + + Sbjct: 573 IEWLMQLISVVPTD---ARALAKLGELYDNEGDKS-QAFQYYYESYRYLPSNIEVIEWLG 628 Query: 218 ANYSDAEHAEEAMARLVEA-----------------YVALALMDEAREVVSLIQERYPQG 260 A Y D + E+A+ A Y +A + I +++P+ Sbjct: 629 AYYIDTQFCEKAIQYFERAALIRPTQVKWQLMVASCYRRSGNYQKALDTYKEIHKKFPEN 688 >gi|158521065|ref|YP_001528935.1| response regulator receiver protein [Desulfococcus oleovorans Hxd3] gi|158509891|gb|ABW66858.1| response regulator receiver protein [Desulfococcus oleovorans Hxd3] Length = 814 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 56/153 (36%), Gaps = 25/153 (16%) Query: 106 SAGKYQQAASLGEEYITQYPESKN--------VDYVYYLVGMSY---AQMIRDVPYDQRA 154 AG ++ + + YIT +P+S +D + ++ Q D+ D Sbjct: 354 KAGALEKKLAALDAYITTHPDSPYKSAAEKQKLDVAREMEIQAFDATLQKTSDLSIDDAF 413 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK-----RGEYVAA 209 + L + +++Y S Y + + + + E Y K + ++ A Sbjct: 414 EEKALALYNDFLDKYPESVYAEEIQKRMADIPAIMKDAE------YGKLQQIPKNDFSAR 467 Query: 210 IPRFQLVLANYS---DAEHAEEAMARLVEAYVA 239 I ++ + Y + ++ ++ L E + A Sbjct: 468 IAAYKAYIEAYPRGENTQNVRRMLSDLGEDFYA 500 >gi|110637942|ref|YP_678149.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406] gi|110280623|gb|ABG58809.1| conserved hypothetical protein, with TPR repeat [Cytophaga hutchinsonii ATCC 33406] Length = 1012 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 66/214 (30%), Gaps = 42/214 (19%) Query: 71 QNFSKAYEYFNQC-----SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 + + +A F + + R + L A + + ++ +A + Sbjct: 519 KKWDEAIPQFVKFITIQAEKKGKGDIYYRDAELRLADLYFVTRRFPEAIKYYD--FALAE 576 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 +++ DY+ + + T +++ +Y NS Y A Sbjct: 577 RNEDEDYILFQKATINYLTNK--------TSQAYSMYAQLTNKYPNSAYYDQALMQRCQL 628 Query: 186 RNQLAAKEVEIGRY------------------------YLKRGEYVAAIPRFQLVLANYS 221 + + EV I Y Y +Y AI + ++ Y Sbjct: 629 DLEASKYEVAIEGYNKIINKKEDLNGLKPIALQKRAISYFNLKDYNKAIADNKRIVYEYP 688 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + A A+ + E L + D++ E ++ + Sbjct: 689 KSAPAYSALLSIQE---MLGIQDKSEEFAPILAK 719 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 75/235 (31%), Gaps = 42/235 (17%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +++KA + S+AY + Q + +P + ++L+ + A KY+ A + Sbjct: 585 LFQKATINYLTNKTSQAYSMYAQLTNKYPNSAYYDQALMQRCQLDLEASKYEVAIEGYNK 644 Query: 120 YITQYPESKNV----DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 I + +++ +SY + + + RIV Y S Sbjct: 645 IIN---KKEDLNGLKPIALQKRAISYFNL--------KDYNKAIADNKRIVYEYPKSAPA 693 Query: 176 KGA---RFYVTVGRNQ-------LAAK-------------EVEIGRYYLKRGEYVAAIPR 212 A + +++ LA E + +Y AI Sbjct: 694 YSALLSIQEMLGIQDKSEEFAPILAKYKELNPSDQDLKEVEFRSAQSLYSSQKYPQAITG 753 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQERYPQGYWARYV 266 F + Y + EA L ++Y A+ + ++ E + + + Sbjct: 754 FAAFIRQYPTHPNVSEAQYYLADSYFRTKDYSNAKATYIEILAE---KNQYYKKS 805 Score = 42.4 bits (99), Expect = 0.075, Method: Composition-based stats. Identities = 10/68 (14%), Positives = 21/68 (30%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + +D + + A Q + +A F R +P ++ A + Sbjct: 724 NPSDQDLKEVEFRSAQSLYSSQKYPQAITGFAAFIRQYPTHPNVSEAQYYLADSYFRTKD 783 Query: 110 YQQAASLG 117 Y A + Sbjct: 784 YSNAKATY 791 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 37/138 (26%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS-- 100 ++ + + + ++A+ + ++++KA + ++P + A +LL Sbjct: 643 NKIINKKEDLNGLKPIALQKRAISYFNLKDYNKAIADNKRIVYEYPKSAPAYSALLSIQE 702 Query: 101 -----------------------------------AFVQYSAGKYQQAASLGEEYITQYP 125 A YS+ KY QA + +I QYP Sbjct: 703 MLGIQDKSEEFAPILAKYKELNPSDQDLKEVEFRSAQSLYSSQKYPQAITGFAAFIRQYP 762 Query: 126 ESKNVDYVYYLVGMSYAQ 143 NV Y + SY + Sbjct: 763 THPNVSEAQYYLADSYFR 780 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 75/213 (35%), Gaps = 27/213 (12%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A ++ ++ + + Y + D L+ A + +Y +A L ++Y+T Sbjct: 215 ANIYYRQAKYDELIPYAEKVIADKSAGPNTNDVKLILADAYFFKQEYAKATPLFKDYLTA 274 Query: 124 YPESKNVDYVYYLVGMSYA---------QMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + Y +G S M++ + D+ + Y+ + Y Sbjct: 275 TGTKSLTPDMKYRIGFSSYKAADYKQAVDMLQAIATDKDSLGQSSAYILGL-------SY 327 Query: 175 VKGARFYVTVGRNQLAAKEVEIGR-------YYLKR----GEYVAAIPRFQLVLANYSDA 223 +K + +LA + V Y K G + A PR + + Y + Sbjct: 328 LKSENKNAALISFELAQRSVFSAVINEEAMFLYAKITSDLGRFTEATPRLKNFIEKYPKS 387 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 H +EA L E+++ DEA + ++ + Sbjct: 388 YHMQEAYELLSESFLGSRNYDEALVYIENLKHQ 420 >gi|154291778|ref|XP_001546469.1| hypothetical protein BC1G_15048 [Botryotinia fuckeliana B05.10] gi|150846627|gb|EDN21820.1| hypothetical protein BC1G_15048 [Botryotinia fuckeliana B05.10] Length = 469 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 15/148 (10%), Positives = 41/148 (27%), Gaps = 23/148 (15%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSA 107 + + + ++ A + + + P + ++ + Sbjct: 2 PSREEEAVALKNEGNKAFAAHDWLGAIDLYTKAIELDDQKP-TYYSNRAQ-----ANIKS 55 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 Y A + + I N YY ++Y +++ K L+ +V+ Sbjct: 56 EAYGYAIADATKAIEL---DPNFGKAYYRRAVAYTAILK--------PKEALKDFKAVVK 104 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + N A+ + + E Sbjct: 105 KAPNDK---DAKLKLAECEKIVKRIEFF 129 >gi|119475629|ref|ZP_01615982.1| Tetratricopeptide TPR_4 [marine gamma proteobacterium HTCC2143] gi|119451832|gb|EAW33065.1| Tetratricopeptide TPR_4 [marine gamma proteobacterium HTCC2143] Length = 280 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 19/103 (18%) Query: 159 LQYMSRIVERYT--NSPYVKGARFYVTVGRNQLAAKEVEIGR--------------YYLK 202 L+ ++ ++ + S Y++ A Y G LA K+ E + YY K Sbjct: 35 LEQLNAVITQQPSLQSAYIQRAALYTRTGNYPLAEKDFEAAQTLGDLYLVSHELGAYYFK 94 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 +YVAA+ +F L +Y + H + EAY + + Sbjct: 95 IKKYVAAVNQFTNYLEHYPN--HYP-TLEYRAEAYREIGKTQK 134 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 45/160 (28%), Gaps = 40/160 (25%) Query: 28 FSIAVCFLVGWERQS--------SRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYE 78 S+AV L+ + + +T + Y ++A L+ + N+ A + Sbjct: 11 ISLAVISLLCCAGHAFSHPGDEHKLEQLNAVITQQPSLQSAYIQRAALYTRTGNYPLAEK 70 Query: 79 YFNQCSRD-------FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES-KNV 130 F + KY A + Y+ YP + Sbjct: 71 DFEAAQTLGDLYLVSHELGAY-----------YFKIKKYVAAVNQFTNYLEHYPNHYPTL 119 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +Y +Y + T+ L+ S +E Sbjct: 120 EY----RAEAY--------REIGKTQKSLEDFSHFLETSP 147 >gi|328701579|ref|XP_001951487.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 1 [Acyrthosiphon pisum] Length = 1177 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 104/276 (37%), Gaps = 37/276 (13%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 + L + + EA A+T F++A F + Q + Y D + + + Sbjct: 473 LEESLSLSKKMVEADPQYYNSIAVTTTFNLARIFEAQCQFQKAETFYKDILKEHPNYIDC 532 Query: 61 YEK-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 Y + + +A ++F + + P + L A +++ G+ Sbjct: 533 YLRLGCMARDRNQIYEASDWFKEALRIDNEHP-DAWSLLGNLHLAKMEWGPGQ------- 584 Query: 117 GEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYT 170 +++ P + N Y +G + Q + ++ R L LQ+ +++++ Sbjct: 585 -KKFERVLKNPSTLNDSYSLIALGNVWLQTLHQPTRNKEQEKRHQDLALQFFTKVLKNDP 643 Query: 171 NSPYVKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRF 213 + + + Y+ R+ A +E + I Y+++ +Y++AI + Sbjct: 644 KNIWAANGIGCVMAHKQYINEARDIFAQVREATADFCDVWLNIAHIYIEQKQYISAIQMY 703 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 + + + ++ E + L AY + EA++V Sbjct: 704 ENCIKKFFKHDNV-EILQYLGRAYFKAGKLKEAKKV 738 >gi|197123793|ref|YP_002135744.1| hypothetical protein AnaeK_3402 [Anaeromyxobacter sp. K] gi|196173642|gb|ACG74615.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. K] Length = 1192 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 56/143 (39%), Gaps = 29/143 (20%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +QA +L + I++YP +D V Y +G + ++ R+ P L+ +++++ Sbjct: 160 EQAVALYKAIISRYPSYPRLDEVLYFLGENLSRRDRNDP-------DALKAYRALIQKFP 212 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-------GEYVAAIPRFQLVLANYSDA 223 +S YV A + G YY +R G A+ ++ Y ++ Sbjct: 213 SSRYVPDAW--------------MAFGEYYFERANKNDRNGNLRKALESYRKAAE-YQES 257 Query: 224 EHAEEAMARLVEAYVALALMDEA 246 A+ + + L EA Sbjct: 258 SVYGYALYKQGWVHYNLGNWSEA 280 Score = 39.7 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 29/74 (39%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D T Y +V +++ +A E Q + +P +A KSL +A + Sbjct: 703 DWPTSRLAPTAYYNASVDYVRAHRLDRAMEIREQFLQRYPTHTLAPKSLYDNAEAYEAVA 762 Query: 109 KYQQAASLGEEYIT 122 + +AA E Y Sbjct: 763 DFGRAADHYERYFQ 776 Score = 35.9 bits (82), Expect = 6.0, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 69/208 (33%), Gaps = 29/208 (13%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 ++ Y+ A L + F +A + F + + D P +A S + G Sbjct: 582 QPRGEKWVEVAYKLANLHYRHNAFGEASDLFTRIALDHPQHELAGYSANLVLDAYNLLGD 641 Query: 110 YQQAASLGEEY------ITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 ++ + + I +P+ K+ + V S ++I + Q QY+ Sbjct: 642 WRNVNGWAKRFYDNRALIAAHPQLKDDLSRVIEQ---SAFKVIEEKEKAQDFVGAAEQYL 698 Query: 163 SRIVERYTNSPYVKGA--RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 + + S A V R + +EI R ++ L Y Sbjct: 699 A-FARDWPTSRLAPTAYYNASVDYVRAHRLDRAMEI------REQF----------LQRY 741 Query: 221 SDAEHAEEAMARLVEAYVALALMDEARE 248 A +++ EAY A+A A + Sbjct: 742 PTHTLAPKSLYDNAEAYEAVADFGRAAD 769 >gi|188584570|ref|YP_001928015.1| tol-pal system protein YbgF [Methylobacterium populi BJ001] gi|179348068|gb|ACB83480.1| tol-pal system protein YbgF [Methylobacterium populi BJ001] Length = 339 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 8/88 (9%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 ++ +A+ +Y+QA ++I +P + V + +G SY Q R Sbjct: 214 QADFEAAYALIRERQYEQAEMSLRQFIQSHPRDRLVPKATFWLGESYLQRNRS------- 266 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYV 182 + + ++ + NSP A + Sbjct: 267 -REAAEQFLKVSTDFANSPVAPEAMLKL 293 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 44/107 (41%), Gaps = 14/107 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R + + + ++ + V A F++ G YL+R A + Sbjct: 227 RQYEQAEMSLRQFIQSHPRDRLVPKATFWL--------------GESYLQRNRSREAAEQ 272 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F V +++++ A EAM +L + AL +A ++ ++ ++P Sbjct: 273 FLKVSTDFANSPVAPEAMLKLGASLHALGAKAQACATLAEVERKFPS 319 >gi|154249690|ref|YP_001410515.1| TPR repeat-containing protein [Fervidobacterium nodosum Rt17-B1] gi|154153626|gb|ABS60858.1| Tetratricopeptide TPR_2 repeat protein [Fervidobacterium nodosum Rt17-B1] Length = 359 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 43/215 (20%), Positives = 86/215 (40%), Gaps = 22/215 (10%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 L L+E + A +Y N+ P +S M Y+ G Y++A E+ I Sbjct: 139 GSLLLEEGDIEGAIKYLNRSIELDP---WLIQSYSMIGEAYYNIGNYEKAVEYWEKEIAI 195 Query: 124 YPESKNVDYVYYLVGMSYA------QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 P + Y+++ +Y + I + + ++ + + + E Y + Sbjct: 196 SPSNTFT---YFMISDAYTKIGKLEKAIEILEKYREESENSIIALYELAELYRKKGNEEK 252 Query: 178 ARFYVTVGRNQLAAKE---VEI-GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 A+ Y ++ K+ +EI + +LK+G Y I + + +A+H L Sbjct: 253 AKEYESLIMEIDPQKDPNGIEIWAKVHLKKGNYDKVISVIENAIKANPEAKHLN---LVL 309 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 AYV +++AR VV +++ +W Y + Sbjct: 310 AVAYVKTNQIEKARRVVEELKD---DNFWYLYGKR 341 >gi|281412533|ref|YP_003346612.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga naphthophila RKU-10] gi|281373636|gb|ADA67198.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga naphthophila RKU-10] Length = 357 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 87/241 (36%), Gaps = 45/241 (18%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 LD + E+ K L +++ + +Y ++ P ++ Y+ Sbjct: 124 LDIDENYAPAYEL--KGSLLVEQGKIEEGIKYLDKAVEIDP---WLVQAYASLGEAHYNL 178 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G Y++A E + P K Y+++ +Y ++ R L + + R+++ Sbjct: 179 GDYEKAIHYWERELEYNPNDKIT---YFMITEAYHEINRK--------DLAAKTLERLLK 227 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAK-------------------EVEI-GRYYLKRGEYV 207 ++ A + ++ L + E+E R LK G Y Sbjct: 228 IDPDNI---PALYQLSQLYRDLGNEEKAKEMEEKIMNCKPKYPTELEPWARVMLKHGRYK 284 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 + + ++ + + A LV YV L +D+ARE++ I + +W Y + Sbjct: 285 EVVEELEKIVES---SPLNTLARLLLVVPYVKLGQIDKAREILEDIGQN---NFWYYYGK 338 Query: 268 T 268 Sbjct: 339 K 339 >gi|171692783|ref|XP_001911316.1| hypothetical protein [Podospora anserina S mat+] gi|170946340|emb|CAP73141.1| unnamed protein product [Podospora anserina S mat+] Length = 496 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 21/171 (12%), Positives = 54/171 (31%), Gaps = 30/171 (17%) Query: 38 WERQSSRDVYLDSVTDVRYQRE---VYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAG 91 W R++ + + V + + + + ++ A ++++ + + P Sbjct: 4 WSRKAQPEPEKEDVEMATPEEQAVALKNQGNKAFAAHDWPTAIDFYSQAIELNDKEP-TF 62 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 + ++ Y A + I P YY +Y +++ Sbjct: 63 WSNRAQ-----AYMKTEAYGYAIRDATKAIELNPGMIK---AYYRRATAYVAILK----- 109 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN---QLAAKE-VEIGR 198 K ++ V+ + A+ + + QLA E +E+G Sbjct: 110 ---PKEAVKDFQTCVKIDPGNK---DAKLKLVECQKAVRQLAFFEAIEVGD 154 >gi|119488444|ref|ZP_01621617.1| Lytic transglycosylase, catalytic [Lyngbya sp. PCC 8106] gi|119455255|gb|EAW36395.1| Lytic transglycosylase, catalytic [Lyngbya sp. PCC 8106] Length = 726 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 80/231 (34%), Gaps = 25/231 (10%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 D+ S R Y A F+++ S+A + +++P +A LL A Sbjct: 68 DIAETSKPSTDRSRARYLLASDFIQQNQPSEAIGLLDGLEKEYPL--LASHILLKRAQAY 125 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY----AQMIRDVPYDQRATKLMLQ 160 G A E + YP+ V +++G Q I D P R ++ Sbjct: 126 EQMGDTANAKQTWEALVKGYPKDPVVAEALFVLGKENPEYWDQAIADFPAHPRTVEIAET 185 Query: 161 YMSRIVERYT-------NSPYVKGARFYVTVGR----NQLAAKEVEIGRY-YLKRGEYVA 208 + + + Y+K Y+ R +QL ++ E + Y ++ +Y Sbjct: 186 RLKENPNQLPLLLIIARHGIYLKDYGTYLEKLRLNYASQLTPEDWEAMAFGYWEKQDYG- 244 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + LA Y+ A + R + E+R+ + + +P Sbjct: 245 -----KGALA-YAKAPRTPRNLYRHARGLWLEGKIPESRQAYEQLIQAFPD 289 Score = 39.3 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 76/231 (32%), Gaps = 33/231 (14%) Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC-----SRDFPFAGV 92 WE+Q L R R +Y A E ++ + + Q + P Sbjct: 238 WEKQDYGKGALAYAKAPRTPRNLYRHARGLWLEGKIPESRQAYEQLIQAFPDQTDPGGED 297 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A L+ + + A ++ I ++P + Y Q++ + Q Sbjct: 298 AGFGLIRLS----RLSDRKDAVKYLDQAIAKFPFHR--PEALYDKA----QLLDKLQSKQ 347 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 Q ++ +++ S A+ + ++ + K G+ A Sbjct: 348 S----ASQARQMLLSQHSESE--PAAQLRWKISQD------------FAKAGKIKEASKW 389 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + + D+E A EA + + + EA++ + RYP Y+A Sbjct: 390 AKELSTQNPDSELAPEATFWIGKWAQQIGNSAEAKKAFEYLLARYPDSYYA 440 >gi|92113978|ref|YP_573906.1| tetratricopeptide TPR_2 [Chromohalobacter salexigens DSM 3043] gi|91797068|gb|ABE59207.1| Tetratricopeptide TPR_2 [Chromohalobacter salexigens DSM 3043] Length = 254 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 45/118 (38%), Gaps = 14/118 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R ++ + Y NS A +++ + A +++ AA Sbjct: 146 REFDAAIKAFEDFIGDYPNSSLRANAHYWLGELYS--AQSQLD------------AAAKS 191 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 FQ V+ ++ ++ +A+ +L DE+R ++ ++ YP+ A E + Sbjct: 192 FQTVIDDFPESNKMPDALYKLGLLKARQGHPDESRSLLDRVRNDYPESNAASMAEDFL 249 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 44/129 (34%), Gaps = 22/129 (17%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA--- 114 R+ Y+ A ++ + F A + F D+P + + A Y G+ A Sbjct: 133 RDAYQAAFQKVQAREFDAAIKAFEDFIGDYPNSSL-------RANAHYWLGELYSAQSQL 185 Query: 115 -SLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + + + I +PES + Y +G+ A+ Q + R+ Y Sbjct: 186 DAAAKSFQTVIDDFPESNKMPDALYKLGLLKAR--------QGHPDESRSLLDRVRNDYP 237 Query: 171 NSPYVKGAR 179 S A Sbjct: 238 ESNAASMAE 246 Score = 43.6 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 8/83 (9%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 A ++ A E++I YP S +Y +G Y+ Q + + Sbjct: 144 QAREFDAAIKAFEDFIGDYPNSSLRANAHYWLGELYSA--------QSQLDAAAKSFQTV 195 Query: 166 VERYTNSPYVKGARFYVTVGRNQ 188 ++ + S + A + + + + + Sbjct: 196 IDDFPESNKMPDALYKLGLLKAR 218 >gi|153006229|ref|YP_001380554.1| hypothetical protein Anae109_3386 [Anaeromyxobacter sp. Fw109-5] gi|152029802|gb|ABS27570.1| TPR repeat-containing protein [Anaeromyxobacter sp. Fw109-5] Length = 1162 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 29/141 (20%) Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 QA +L + I +YP+ +D V Y + + +Q R +D L+ ++ERY + Sbjct: 160 QAVALYKAIIAKYPKYPRLDEVLYFLAENLSQRDR---FDP----EALKAYRALIERYPS 212 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYL-------KRGEYVAAIPRFQLVLANYSDAE 224 S YV A + G YY + G A+ ++ Y ++ Sbjct: 213 SRYVPDAW--------------MAFGEYYFEKANKSDRTGNLTKALDAYKKAAE-YQESS 257 Query: 225 HAEEAMARLVEAYVALALMDE 245 A+ + + L D+ Sbjct: 258 VYAYALYKQAWVHYNLGAYDQ 278 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 28/74 (37%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D +Y +V + + +A E Q +P +A KSL +A + Sbjct: 697 DWPQSRLAPTALYNASVDYGRAHRLDRAMEVREQFLARYPGHELAPKSLYDNAEAFEAIA 756 Query: 109 KYQQAASLGEEYIT 122 + +AA L E Y Sbjct: 757 DFSRAADLYERYFR 770 Score = 37.0 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 39/101 (38%), Gaps = 15/101 (14%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 K +++ A E + SRD+P + +A +L ++ A + +A + E+++ +YP + Sbjct: 680 KARDYEAAAEEYIAFSRDWPQSRLAPTALYNASVDYGRAHRLDRAMEVREQFLARYPGHE 739 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y D + SR + Y Sbjct: 740 LAPKSLY---------------DNAEAFEAIADFSRAADLY 765 >gi|209550774|ref|YP_002282691.1| tol-pal system protein YbgF [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536530|gb|ACI56465.1| tol-pal system protein YbgF [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 329 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 56/163 (34%), Gaps = 16/163 (9%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 A + ++ + + + Y+ A + ++S A + F Q +P + Sbjct: 179 ANAGVGSGPIPNANPGAPQQTASLGGEADQYKSAYGHVLSGDYSTAEQEFTQYITRYPSS 238 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP---ESKNVDYVYYLVGMSYAQMIRD 147 A + YS GKY +A + ++ + S+ + +GMS A + Sbjct: 239 ARAADANFWLGEALYSQGKYNEA---AKTFLNAHQKYATSEKAPEMLLKLGMSLAALDN- 294 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 T+ + + +RY + V + +LA Sbjct: 295 -------TETACATLREVSKRYPKASRA--VISKVASEQKRLA 328 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 Q ++ + RY +S A F++ +G+Y A F Sbjct: 224 AEQEFTQYITRYPSSARAADANFWLGEAL--------------YSQGKYNEAAKTFLNAH 269 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y+ +E A E + +L + AL + A + + +RYP+ Sbjct: 270 QKYATSEKAPEMLLKLGMSLAALDNTETACATLREVSKRYPKAS 313 >gi|163787843|ref|ZP_02182290.1| hypothetical protein FBALC1_04852 [Flavobacteriales bacterium ALC-1] gi|159877731|gb|EDP71788.1| hypothetical protein FBALC1_04852 [Flavobacteriales bacterium ALC-1] Length = 1007 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 91/245 (37%), Gaps = 48/245 (19%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +YE A ++K + KA + +++ + ++ + K+LL V Y++ + Sbjct: 605 PKSALRDDAMYELANSYVKSNDTDKAMQMYDRLNSEYRRSAFTSKALLRQGLVYYNSNEN 664 Query: 111 QQAASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPYDQ 152 ++A S ++ +P S +Y ++ + Y + + DV D Sbjct: 665 ERALSKFKKVAKDFPASGEAVQAVSTARLIYIDLGRVDEYARWVKSLDYVE-VTDVELDN 723 Query: 153 R------------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 T ++ ++ + ++ N + + + + Y Sbjct: 724 TMYLAAEKPYLDNDTDKAIRQFNKYLNQFPNGIHALKS--------------HFYLAQMY 769 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI--QERYP 258 K+ + A P ++ V+ S +E+ E+A RL E Y+ + A V+ + + YP Sbjct: 770 YKKDLFDNAQPHYKYVVDA-SKSEYTEQATVRLCEIYLTNSNWSRAIPVLKRLESEADYP 828 Query: 259 QGYWA 263 Q Sbjct: 829 QNVLY 833 Score = 42.0 bits (98), Expect = 0.088, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 59/189 (31%), Gaps = 27/189 (14%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + Q +++A Y + Y ++ A S + I Sbjct: 251 GESYFNLQKYAEAIPYLKAYKGKR--GKWNNTDYYQLGYAYYKQNDFEAAISEFNKIID- 307 Query: 124 YPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + +V YY +G SY + + + L + + + A ++ Sbjct: 308 --GNNSVAQNAYYHLGESYINLDKK--------QEALNAFRNASQMDYEAQIQEDA--WL 355 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 A EIG Y + +A L Y + + EE L+++Y+ Sbjct: 356 NY-----AKISYEIGNPYQSVPQVLA------GYLDKYPETSYKEEIETLLIDSYITSKN 404 Query: 243 MDEAREVVS 251 EA E++ Sbjct: 405 YKEAIELLK 413 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 31/235 (13%), Positives = 68/235 (28%), Gaps = 34/235 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARK 95 + S D + Y + + K+ ++ +P + + Sbjct: 553 SKYQSAISAYDKAIQINEIETDYASFQVAMSHGYLGKSSTKTSELKTFIEGYPKSALRDD 612 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 ++ A + +A + + ++Y S G+ Y + Sbjct: 613 AMYELANSYVKSNDTDKAMQMYDRLNSEYRRSAFTSKALLRQGLVYYNSNEN-------- 664 Query: 156 KLMLQYMSRIVERYTNSPYVKGA--RFYVTVG----RNQLAA-----KEVEIGRYYLKRG 204 + L ++ + + S A + ++ A VE+ L Sbjct: 665 ERALSKFKKVAKDFPASGEAVQAVSTARLIYIDLGRVDEYARWVKSLDYVEVTDVELDNT 724 Query: 205 EYVA------------AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 Y+A AI +F L + + HA ++ L + Y L D A+ Sbjct: 725 MYLAAEKPYLDNDTDKAIRQFNKYLNQFPNGIHALKSHFYLAQMYYKKDLFDNAQ 779 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 71/200 (35%), Gaps = 35/200 (17%) Query: 67 FLKEQNFSKAYEYFNQCSRD--FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 +L N+S+A + + +P + +S LM+A+ Y Y +A + E Sbjct: 805 YLTNSNWSRAIPVLKRLESEADYPQNVLYAQSNLMNAY--YQTQDYNEAEAYAE------ 856 Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRA--TKLMLQYMSRIVERYTNSPYVKGARFYV 182 +S +++ + + D + + ++ + K A V Sbjct: 857 ------------KVLSTSKLDKKIKSDAKIIIARSAIKTGNE--------DKAKDAYADV 896 Query: 183 TVGR--NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA-EEAMARLVEAYVA 239 + A G + K G Y A+ Q + +YS ++ + + + + + A Sbjct: 897 EKIATGSVAAEALFYNGYFKNKEGRYKASNTTIQKLAKDYSSYKYYSAKGLVVMAKNFYA 956 Query: 240 LALMDEAREVVSLIQERYPQ 259 L +A ++ + +P Sbjct: 957 LGDAFQATYILESVISNFPD 976 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 26/206 (12%), Positives = 64/206 (31%), Gaps = 25/206 (12%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGEEY 120 KA N++ A F Q + + + + L + + Y A+ +++ Sbjct: 468 KAETEYNLSNYNDALIGFKQFNGLAESSDLPERDNLDYNLGYTYFKLKDYSNASKYFQKF 527 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I + + L + D + + + + ++ Sbjct: 528 IDKNSSDR-------LRRNDAYLRVADGHFVSSKYQSAISAYDKAIQ------------- 567 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + A+ +V + YL G+ + + Y + ++AM L +YV Sbjct: 568 -INEIETDYASFQVAMSHGYL--GKSSTKTSELKTFIEGYPKSALRDDAMYELANSYVKS 624 Query: 241 ALMDEAREVVSLIQERYPQGYWARYV 266 D+A ++ + Y + + Sbjct: 625 NDTDKAMQMYDRLNSEYRRSAFTSKA 650 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 27/75 (36%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + + VTDV +Y A + + KA FN+ FP A KS A + Sbjct: 709 KSLDYVEVTDVELDNTMYLAAEKPYLDNDTDKAIRQFNKYLNQFPNGIHALKSHFYLAQM 768 Query: 104 QYSAGKYQQAASLGE 118 Y + A + Sbjct: 769 YYKKDLFDNAQPHYK 783 >gi|162450458|ref|YP_001612825.1| hypothetical protein sce2186 [Sorangium cellulosum 'So ce 56'] gi|161161040|emb|CAN92345.1| hypothetical protein predicted by Glimmer/Critica [Sorangium cellulosum 'So ce 56'] Length = 413 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 29/80 (36%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 + + E+ + A+ + +A E + +P + +A + + Sbjct: 316 QAPPRASLTAENELLQGAMAARRRGQPRRAIERLDLLLGRYPDSPLAEIARVERLRAIEM 375 Query: 107 AGKYQQAASLGEEYITQYPE 126 G ++ A+ Y+ YP+ Sbjct: 376 LGDKERTAAEARRYLKDYPQ 395 Score = 38.6 bits (89), Expect = 0.90, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 7/75 (9%) Query: 190 AAKEV----EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 A E+ R +RG+ AI R L+L Y D+ AE A + A L + Sbjct: 325 AENELLQGAMAAR---RRGQPRRAIERLDLLLGRYPDSPLAEIARVERLRAIEMLGDKER 381 Query: 246 AREVVSLIQERYPQG 260 + YPQG Sbjct: 382 TAAEARRYLKDYPQG 396 >gi|93279690|pdb|2FO7|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix (Trigonal Crystal Form) gi|168177007|pdb|2HYZ|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix (Orthorombic Crystal Form) Length = 136 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 55/163 (33%), Gaps = 31/163 (19%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + K+ ++ +A EY+ + P + ++ Y G Y +A ++ Sbjct: 5 YNLGNAYYKQGDYDEAIEYYQKALELDPRSA---EAWYNLGNAYYKQGDYDEAIEYYQKA 61 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + P S +Y +G +Y + Q ++Y + +E S Sbjct: 62 LELDPRS---AEAWYNLGNAYYK--------QGDYDEAIEYYQKALELDPRSAEAW---- 106 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 +G Y K+G+Y AI +Q L + Sbjct: 107 -------------YNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 43/120 (35%), Gaps = 14/120 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D R Y + K+ ++ +A EY+ + P + ++ Y G Y + Sbjct: 31 DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSA---EAWYNLGNAYYKQGDYDE 87 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A ++ + P S +Y +G +Y + Q ++Y + +E S Sbjct: 88 AIEYYQKALELDPRS---AEAWYNLGNAYYK--------QGDYDEAIEYYQKALELDPRS 136 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 48/151 (31%), Gaps = 31/151 (20%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 Y G Y +A ++ + P S +Y +G +Y + Q Sbjct: 6 NLGNAYYKQGDYDEAIEYYQKALELDPRS---AEAWYNLGNAYYK--------QGDYDEA 54 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++Y + +E S +G Y K+G+Y AI +Q L Sbjct: 55 IEYYQKALELDPRSAEAW-----------------YNLGNAYYKQGDYDEAIEYYQKALE 97 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREV 249 + EA L AY DEA E Sbjct: 98 LDPRS---AEAWYNLGNAYYKQGDYDEAIEY 125 >gi|317153422|ref|YP_004121470.1| tol-pal system protein YbgF [Desulfovibrio aespoeensis Aspo-2] gi|316943673|gb|ADU62724.1| tol-pal system protein YbgF [Desulfovibrio aespoeensis Aspo-2] Length = 300 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 47/142 (33%), Gaps = 22/142 (15%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 K+L A+ Y ++++A S E+ + + G Y ++ +D Sbjct: 180 KALYDKAYALYKEDQFEKARSYWAEFTDTFKSHSFAPSAVFWQGQCYFKL-KDYSR---- 234 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 + ++E+Y S K A + L E+ A R Sbjct: 235 ---AVILFEDVIEKYAKSAKYKAALLRAGYSWDYLGKPEL--------------AKMRMA 277 Query: 215 LVLANYSDAEHAEEAMARLVEA 236 V+ + + A +A L +A Sbjct: 278 EVVKKFPKSVEATQAARFLEKA 299 Score = 42.8 bits (100), Expect = 0.058, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 53/146 (36%), Gaps = 10/146 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 + + T + +Y+KA KE F KA Y+ + + F A ++ Sbjct: 164 DEDEPGETAATSSDPAKALYDKAYALYKEDQFEKARSYWAEFTDTFKSHSFAPSAVFWQG 223 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD-QRATKLMLQ 160 + Y +A L E+ I +Y +S Y + + +D +L Sbjct: 224 QCYFKLKDYSRAVILFEDVIEKYAKS-----AKYKAAL----LRAGYSWDYLGKPELAKM 274 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGR 186 M+ +V+++ S A ++ + Sbjct: 275 RMAEVVKKFPKSVEATQAARFLEKAK 300 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 17/139 (12%), Positives = 48/139 (34%), Gaps = 22/139 (15%) Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 Y + + + + Y + + + + + A F+ Sbjct: 181 ALYDKAYALYKEDQ--------FEKARSYWAEFTDTFKSHSFAPSAVFWQGQC------- 225 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 Y K +Y A+ F+ V+ Y+ + + A+ R ++ L + A+ ++ Sbjct: 226 -------YFKLKDYSRAVILFEDVIEKYAKSAKYKAALLRAGYSWDYLGKPELAKMRMAE 278 Query: 253 IQERYPQGYWARYVETLVK 271 + +++P+ A ++ Sbjct: 279 VVKKFPKSVEATQAARFLE 297 >gi|312891213|ref|ZP_07750734.1| tetratricopeptide TPR_3 [Mucilaginibacter paludis DSM 18603] gi|311296292|gb|EFQ73440.1| tetratricopeptide TPR_3 [Mucilaginibacter paludis DSM 18603] Length = 619 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 7/131 (5%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y +A L + +Q+ KA + + FP + L+ A + YQ A + + Sbjct: 492 KMYARADLLIYKQDPDKAVITLDSIDKVFPGNTLTDDILMAKARILIQKKDYQLALAPLQ 551 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + D +++G Y + D +I+ Y S ++ A Sbjct: 552 DIEKNHASGLWADDAVFMLGDIYENHLND-------KAKAQICYQKIITDYPGSTWLNEA 604 Query: 179 RFYVTVGRNQL 189 R R L Sbjct: 605 RKRFRTLRGDL 615 >gi|153872159|ref|ZP_02001130.1| soluble lytic murein transglycosylase precursor [Beggiatoa sp. PS] gi|152071375|gb|EDN68870.1| soluble lytic murein transglycosylase precursor [Beggiatoa sp. PS] Length = 798 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 75/255 (29%), Gaps = 62/255 (24%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS-----LLMS-----------AFVQYS 106 A + + N+ +AY ++ + P A K+ L Y Sbjct: 213 TAEAYRQLGNYHQAYTLYDSIWYETPAGAWADKARKVLRELEQKVPTLQPKSLSTDEYYQ 272 Query: 107 -------AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 AG + A + +I +P+ DY+ YL +S + R+ + Sbjct: 273 FIQKIWNAGLHNTALTEINAFIKAHPDYSKADYLLYLKIISLHAVRRNDD--------AV 324 Query: 160 QYMSRIVERYTNSP-------YVKGARFY----------VTVGRNQLAAKEVEI-GRYYL 201 M + +RY S Y A V + E I Y Sbjct: 325 STMKTLRDRYPTSKRLPAAGIYAIKALRRSDNTPQIQYWVNWIVDNYPNHEKSIEALYNW 384 Query: 202 KRGEYV-------AAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVV 250 G Y I V+ S ++A +++ L D+A E + Sbjct: 385 --GGYQCNVVSQEEGIKVLWQVIRKGSQTATPHSVVDDAFWKIIWVQRHLKQTDKAIETL 442 Query: 251 SLIQERYPQGYWARY 265 + + Y + + R Sbjct: 443 LKLLKTYSESNYYRK 457 >gi|71892118|ref|YP_277850.1| putative periplasmic protein [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796224|gb|AAZ40975.1| putative periplasmic protein [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 261 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 45/129 (34%), Gaps = 15/129 (11%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y++AV L+++ +++A E F R+ P + S + Y+ G Sbjct: 143 YKQAVSLVLEKKQYNQAIEAFQNFIRNHPESIYQSNSHYWLGQLYYNKGNK---HDAARH 199 Query: 120 Y---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + + YP+S +G+ + + ++ + Y NS K Sbjct: 200 FALVVKNYPKSLKASDALLKIGIIMQETEQK--------DKAKTIYKKVGKLYPNSNAAK 251 Query: 177 GARFYVTVG 185 A+ + Sbjct: 252 QAQKRLIHL 260 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 47/127 (37%), Gaps = 14/127 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + + +++ ++ + + S Y + +++ YY Sbjct: 143 YKQAVSLVLEKKQYNQAIEAFQNFIRNHPESIYQSNSHYWLGQL-------------YYN 189 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 K ++ AA F LV+ NY + A +A+ ++ D+A+ + + + YP Sbjct: 190 KGNKHDAARH-FALVVKNYPKSLKASDALLKIGIIMQETEQKDKAKTIYKKVGKLYPNSN 248 Query: 262 WARYVET 268 A+ + Sbjct: 249 AAKQAQK 255 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 47/127 (37%), Gaps = 22/127 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y QA + +I +PES +Y +G Y + +D ++ + +V+ Sbjct: 154 KQYNQAIEAFQNFIRNHPESIYQSNSHYWLGQLYYN--KGNKHD------AARHFALVVK 205 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y S A + + + K+ A ++ V Y ++ A+ Sbjct: 206 NYPKSLKASDALLKIGIIMQETEQKD--------------KAKTIYKKVGKLYPNSNAAK 251 Query: 228 EAMARLV 234 +A RL+ Sbjct: 252 QAQKRLI 258 >gi|242279894|ref|YP_002992023.1| hypothetical protein Desal_2428 [Desulfovibrio salexigens DSM 2638] gi|242122788|gb|ACS80484.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio salexigens DSM 2638] Length = 794 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 64/225 (28%), Gaps = 48/225 (21%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-----KSLLMSAFVQYSAGKYQQAASLGE 118 A L++ + +A P + + L + ++ + +A + Sbjct: 304 AGLYMAQGRQEEAIRVLLDGVALDPEGTESSDYVVYRKQLATMYL--DMNEPNKAIEQLD 361 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 I P+ +YL G Y R L + ++V S A Sbjct: 362 SVIELNPKD---AEAHYLRGQIYLLEGRG--------NLAVSEFRQVVRDNPES-----A 405 Query: 179 RFYVTVGRNQLAAKEVEIG----------------------RYYLKRGEYVAAIPRFQLV 216 YV + R L E I YL R ++ AI Q + Sbjct: 406 PAYVLLARAHLVNGETNIAIENLKEAINLEPGYAPAREVLINTYLDRKDWHQAILELQRL 465 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 D +A + + Y + A + + E++P Sbjct: 466 REKRPDDIQI---LAAIGDVYSIKGDKNLASRTYNELSEKFPDSP 507 Score = 39.7 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 59/187 (31%), Gaps = 34/187 (18%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + ++L E + A F Q RD P + + ++ A G+ A +E Sbjct: 375 YLRGQIYLLEGRGNLAVSEFRQVVRDNPESA---PAYVLLARAHLVNGETNIAIENLKEA 431 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I P Y + + D++ + + R+ E+ + Sbjct: 432 INLEPG-----YAPAREVLINTYL------DRKDWHQAILELQRLREKRPDD-------- 472 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 LA IG Y +G+ A + + + D+ E +A L + L Sbjct: 473 -----IQILA----AIGDVYSIKGDKNLASRTYNELSEKFPDSPVGEMKLAELARS---L 520 Query: 241 ALMDEAR 247 A Sbjct: 521 GKNSLAE 527 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 64/202 (31%), Gaps = 34/202 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A L + A E + P AR+ L+ + + QA + + Sbjct: 412 ARAHLVNGETNIAIENLKEAINLEPGYAPAREVLINT---YLDRKDWHQAILELQRLREK 468 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG--ARFY 181 P+ + I DV + L + + + E++ +SP + A Sbjct: 469 RPDDIQI-----------LAAIGDVYSIKGDKNLASRTYNELSEKFPDSPVGEMKLAELA 517 Query: 182 VTVGRNQLAAKEVEIG---------------RYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 ++G+N LA ++ + +Y AA + +L + D Sbjct: 518 RSLGKNSLAEMHYTAALKVAPDSLAAIQGKVDIFILQHKYTAATNFCERLLQKFPDNARI 577 Query: 227 EEAMARLVEAYVALALMDEARE 248 E L + + A ++A Sbjct: 578 YE---LLGKVHAAWGNFEDAET 596 >gi|119504266|ref|ZP_01626346.1| hypothetical protein MGP2080_00300 [marine gamma proteobacterium HTCC2080] gi|119459774|gb|EAW40869.1| hypothetical protein MGP2080_00300 [marine gamma proteobacterium HTCC2080] Length = 309 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 45/121 (37%), Gaps = 12/121 (9%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAASLGEEYITQY 124 ++K +NF+ A + F P A + + + + A + + QY Sbjct: 196 YVKSRNFTAAVDAFQDFLGRHPLGAYAPNAHYWLGELYLVVDPSEPELARQNFKLLLDQY 255 Query: 125 PESKNVDYVYYLVGMSYA-QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 P++ V Y +G + + RD +Y+ +++ Y P + AR ++ Sbjct: 256 PKNAKVPDALYKLGKVHFLKGSRDRSR---------EYLEQVIREYPRHPAAQLARDFLD 306 Query: 184 V 184 Sbjct: 307 E 307 Score = 43.2 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 36/106 (33%), Gaps = 12/106 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R + + R+ Y A +++ + E E+ R Sbjct: 200 RNFTAAVDAFQDFLGRHPLGAYAPNAHYWLGELYLVVDPSEPELAR------------QN 247 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 F+L+L Y +A+ +L + + D +RE + + YP Sbjct: 248 FKLLLDQYPKNAKVPDALYKLGKVHFLKGSRDRSREYLEQVIREYP 293 >gi|121998998|ref|YP_001003785.1| hypothetical protein Hhal_2219 [Halorhodospira halophila SL1] gi|121590403|gb|ABM62983.1| Tetratricopeptide domain protein [Halorhodospira halophila SL1] Length = 252 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 8/131 (6%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y+ A L + + +A E F A ++ A Y+ +++ A + Sbjct: 125 ELYQAAFRQLGDGLYEEAREGFRDVLDTDADGDYAANAVYWIAETYYAEREFEDAEAYFN 184 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + Y ES V +G + R + + + E + ++ A Sbjct: 185 RVVDDYEESNKVADAQLKLGYIAFEEDR--------LEEARDRLEAVQEDHPDTTAANLA 236 Query: 179 RFYVTVGRNQL 189 + ++ R L Sbjct: 237 QQRLSEIRRLL 247 Score = 35.5 bits (81), Expect = 8.3, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 14/105 (13%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + + +++ + Y A +++ A +E E Y R Sbjct: 140 EEAREGFRDVLDTDADGDYAANAVYWIAETY--YAEREFEDAEAYFNR------------ 185 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 V+ +Y ++ +A +L ++EAR+ + +QE +P Sbjct: 186 VVDDYEESNKVADAQLKLGYIAFEEDRLEEARDRLEAVQEDHPDT 230 >gi|261416344|ref|YP_003250027.1| hypothetical protein Fisuc_1955 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372800|gb|ACX75545.1| hypothetical protein Fisuc_1955 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 638 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 79/230 (34%), Gaps = 30/230 (13%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + +Y + + + L + AY FN+ + ++P + +S Sbjct: 259 KALYKVEAYEKQRPHYLVRIGETTLLAGRNADAYVIFNKVNTEYPKTEQSSRS------- 311 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRATKLMLQ 160 ++ G Y+Q+ + Y + MSY R + + ++ Sbjct: 312 YFNMGDYEQSKTQN-----------------YELAMSYYDSSYIARSISEYAQKSRERRN 354 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR-YYLKRGEYVAAIPRFQLVLAN 219 + R+V + + ++ + ++ A E I + LK E +A+ R V+ Sbjct: 355 ALRRLVSMRDRNEEILQSKDSIPNMKSFFA-NEFMIAELFLLKLSEADSAVARLTNVIEK 413 Query: 220 YSDAEHAEEAMARLVEAYVA-LALMDEAREVVSLIQERYPQGYWARYVET 268 D A Y L D A E+ I E+YP +A+ + Sbjct: 414 SDDTASVMRASYARAFIYDEFLHDPDTAEELYKEIIEKYPNTDYAKQAQA 463 >gi|220904572|ref|YP_002479884.1| hypothetical protein Ddes_1304 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868871|gb|ACL49206.1| hypothetical protein Ddes_1304 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 982 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 79/230 (34%), Gaps = 38/230 (16%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARKSLLMSA 101 D + V V E+A ++E+ + +A + P + K+L + Sbjct: 288 DEQGNPVPRPINPEIVMEEAERLIRERKYIEALPQLEKLRSLPGLHP--EMLEKALYYIS 345 Query: 102 F---VQYSAGK---YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 +Y+ Y+ S E + S V +G++ + V Sbjct: 346 DCTWARYADNPLAGYEAIVSSTSEAMNANLRSPRVPEALLRLGLANVNVGNLVD------ 399 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 Y+ ++ RY + Y A+ + +G+ QL KRG A F + Sbjct: 400 --AGGYIVALLRRYPD--YPGVAQGFTALGKAQL------------KRGLDERAEQSFSM 443 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 VL Y ++ + +EA L EA+ A+ + + W RY Sbjct: 444 VLDKYPESSYLQEASVGLAEAFNRQKKFQNAQ-----LILDFISKRWPRY 488 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 18/139 (12%), Positives = 43/139 (30%), Gaps = 20/139 (14%) Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Y + + RD ++ K + ++++ +T + + ++ +AA Sbjct: 808 LYQRAYATYFLARDAEQ-RKDIKDSYELNRKVIDLFTRLQEERSDKADPQRIKDAMAAL- 865 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLA---NY-----SDAEHAEEAMARLVEAYVALALMDE 245 ++I R L Y ++ R Y L Sbjct: 866 MDISE----------VANRVPEALEWVGRYNAYASPESPEYPGLRFREARLYRKLGDAAR 915 Query: 246 AREVVSLIQERYPQGYWAR 264 A+ ++ + YP +A+ Sbjct: 916 AQALLEDVVRNYPNSPFAQ 934 Score = 35.5 bits (81), Expect = 8.3, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 23/173 (13%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI-T 122 LK +A + F+ +P + +++ + A K+Q A + + +I Sbjct: 425 GKAQLKRGLDERAEQSFSMVLDKYPESSYLQEASVGLAEAFNRQKKFQNAQLILD-FISK 483 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 ++P YY+ S+ + T L + Sbjct: 484 RWPR-------YYIDEPSFLLLQAGNDEALGKTGPALGLYWLYYNLVPGHEGNDELLLRL 536 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 G Y ++G +++A ++ V ++ A A RL E Sbjct: 537 --------------GDMYARQGGWISAEFVYRYVERVFAGTASASVARLRLAE 575 >gi|217076209|ref|YP_002333925.1| tetratricopeptide repeat domain protein [Thermosipho africanus TCF52B] gi|217036062|gb|ACJ74584.1| tetratricopeptide repeat domain protein [Thermosipho africanus TCF52B] Length = 375 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 41/116 (35%), Gaps = 24/116 (20%) Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT---------QYPESKN 129 F + P + + + + A+ Y Y A ++ E I Y Sbjct: 271 LFEKFD---PNSNETLRFMWLIAYQYYKQKNYIMAKNILETIIDKALSNNLNYLY----F 323 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 +D VYY + Y +M + + +ER+ NS Y K A +++ + Sbjct: 324 IDDVYYYRALIYYEM--------GDFENAYLLFNDFIERFPNSTYKKHAEYFIKIL 371 >gi|285803495|pdb|3KD7|A Chain A, Designed Tpr Module (Ctpr390) In Complex With Its Peptide- Ligand (Hsp90 Peptide) gi|285803496|pdb|3KD7|B Chain B, Designed Tpr Module (Ctpr390) In Complex With Its Peptide- Ligand (Hsp90 Peptide) gi|285803497|pdb|3KD7|C Chain C, Designed Tpr Module (Ctpr390) In Complex With Its Peptide- Ligand (Hsp90 Peptide) gi|285803498|pdb|3KD7|D Chain D, Designed Tpr Module (Ctpr390) In Complex With Its Peptide- Ligand (Hsp90 Peptide) gi|285803499|pdb|3KD7|E Chain E, Designed Tpr Module (Ctpr390) In Complex With Its Peptide- Ligand (Hsp90 Peptide) Length = 125 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 40/116 (34%), Gaps = 14/116 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + K+ ++ KA EY+ + P + Y G YQ+A ++ + Sbjct: 14 NLGNAYYKQGDYQKAIEYYQKALELDPNNA---SAWYNLGNAYYKQGDYQKAIEYYQKAL 70 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 P + +Y G +Y + Q + ++ + +E N+ K Sbjct: 71 ELDPNNAK---AWYRRGNAYYK--------QGDYQKAIEDYQKALELDPNNAKAKQ 115 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 3/70 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + K+ ++ KA EY+ + P K+ Y G YQ+A ++ Sbjct: 47 YNLGNAYYKQGDYQKAIEYYQKALELDPNNA---KAWYRRGNAYYKQGDYQKAIEDYQKA 103 Query: 121 ITQYPESKNV 130 + P + Sbjct: 104 LELDPNNAKA 113 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 28/120 (23%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 Y G YQ+A ++ + P + + +Y +G +Y + Q + Sbjct: 14 NLGNAYYKQGDYQKAIEYYQKALELDPNNAS---AWYNLGNAYYK--------QGDYQKA 62 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++Y + +E N+ R G Y K+G+Y AI +Q L Sbjct: 63 IEYYQKALELDPNNAKAWYRR-----------------GNAYYKQGDYQKAIEDYQKALE 105 >gi|85706709|ref|ZP_01037801.1| hypothetical protein ROS217_08159 [Roseovarius sp. 217] gi|85668767|gb|EAQ23636.1| hypothetical protein ROS217_08159 [Roseovarius sp. 217] Length = 281 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 19/156 (12%), Positives = 58/156 (37%), Gaps = 10/156 (6%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 A S+ ++ +++ +E+A L+ N +A F +P + Sbjct: 132 AGGGTAALPSPSTPTPTDNAPQLAIGEKDDFERAEAALQAGNHDEAAAGFATFLSTYPGS 191 Query: 91 GVARKSLLMSAFVQYSAG-KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 ++ ++ L+ ++G + + A + + + P+ + +G + ++ Sbjct: 192 PLSGRAGLLRGEALEASGQQSEAARAYLDSFSAA-PDGAEAPESLFRLGRALGRL----- 245 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 T+ ++++ RY + V A+ ++ Sbjct: 246 ---GQTQEACVTLAQVAARYPTAAAVASAQTEMSRL 278 Score = 40.9 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 33/102 (32%), Gaps = 14/102 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + Y SP A + ++ E R YL + AA Sbjct: 176 EAAAGFATFLSTYPGSPLSGRAGLLRGEALEA-SGQQSEAARAYL--DSFSAA------- 225 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 D A E++ RL A L EA ++ + RYP Sbjct: 226 ----PDGAEAPESLFRLGRALGRLGQTQEACVTLAQVAARYP 263 >gi|298715552|emb|CBJ28105.1| conserved unknown protein [Ectocarpus siliculosus] Length = 510 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 19/150 (12%), Positives = 40/150 (26%), Gaps = 22/150 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + ++ V + V + + L E A + P A L Sbjct: 21 DVSTAMKVVTPNPETVSAAEALKLEGNALLAESKLGHAVGKYTAAIDLHPTAIY----LS 76 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATK 156 AF ++ A + + + Y YY G + + + K Sbjct: 77 NRAFCYVKLEQFGLAILDADMALEL-----DSTYVKAYYRRGSANMALAK--------FK 123 Query: 157 LMLQYMSRIVERYTNSPYVK---GARFYVT 183 L ++ ++ + S A + Sbjct: 124 LAVKDFRKVTKMQPKSKEAAAKLKASEKMQ 153 >gi|157962383|ref|YP_001502417.1| Tol-Pal system YbgF [Shewanella pealeana ATCC 700345] gi|157847383|gb|ABV87882.1| Tol-Pal system YbgF [Shewanella pealeana ATCC 700345] Length = 241 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 45/127 (35%), Gaps = 14/127 (11%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + + ++ ++ + + ++ ++RY NS Y A +++ Sbjct: 122 ASYEQAVNLVLKEKKYEAAIPAFAQFIQRYPNSSYAPNANYWLGQLL------------- 168 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + E+ A F V+ Y+D+ E++ +L +A+ + + Y Sbjct: 169 -YNKSEFDGASKAFTTVVEKYTDSSKRGESLVKLGMIAEKTGDKAKAKAYYQKVTQEYAN 227 Query: 260 GYWARYV 266 AR Sbjct: 228 SAAARIA 234 Score = 35.5 bits (81), Expect = 9.3, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 YE+AV LKE+ + A F Q + +P + A + + Y+ ++ A Sbjct: 124 YEQAVNLVLKEKKYEAAIPAFAQFIQRYPNSSYAPNANYWLGQLLYNKSEFDGA 177 >gi|56697939|ref|YP_168310.1| hypothetical protein SPO3107 [Ruegeria pomeroyi DSS-3] gi|56679676|gb|AAV96342.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3] Length = 271 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 45/128 (35%), Gaps = 14/128 (10%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ A L+ +++KA + F Q +P + +A ++ L G ++AA Y Sbjct: 152 FDSATQALEAGDYAKAADLFTQFDASYPGSPLAAEAHLKRGKALDGLGDTREAARA---Y 208 Query: 121 ITQYPES---KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + + Y +G + ++ T + + R+ ++ V Sbjct: 209 LASFTGDGSGPFSAEALYKLGSALGRL--------GQTSQACVTLGEVSVRFPSAASVAD 260 Query: 178 ARFYVTVG 185 A + Sbjct: 261 AHREMASL 268 >gi|167752636|ref|ZP_02424763.1| hypothetical protein ALIPUT_00891 [Alistipes putredinis DSM 17216] gi|167659705|gb|EDS03835.1| hypothetical protein ALIPUT_00891 [Alistipes putredinis DSM 17216] Length = 275 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 12/121 (9%), Positives = 36/121 (29%), Gaps = 10/121 (8%) Query: 19 LYKFALTIFFSIAVCFLVG-------WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71 + ++ L + ++ + G Q + S +++++A Sbjct: 1 MKRYILFLLATLLSAAVSGQTAARTDSLAQHPQSEQTASAAYASDPDKLWDQANTAYINN 60 Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 +F A + + K A + + +A + P ++++ Sbjct: 61 DFPTAISLYETILSS---GRQSGKLYYNLANAYFKEQEIGRAILNYNRALRLNPGNEDIR 117 Query: 132 Y 132 Y Sbjct: 118 Y 118 >gi|186686827|ref|YP_001870020.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102] gi|186469179|gb|ACC84979.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC 73102] Length = 168 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 50/141 (35%), Gaps = 11/141 (7%) Query: 46 VYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 DS T+ E Y ++ ++ +++ A E FNQ + P + + Sbjct: 36 QVPDSQTENPKDTETYFKRGFKRIESKDYRGAIEDFNQILKIEPNNAY---AYVGRGLGN 92 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM-S 163 + +YQ A + ++ I + ++ Y YY G++ + +D P + Sbjct: 93 FCLDEYQAAKTDFDKAIEI---TPDIPYAYYFRGLTNFAL-KDKPAAIADLQKSFTLFKQ 148 Query: 164 RIVERYTNSPYVKGARFYVTV 184 + + + A + Sbjct: 149 EGNQEF--AQKATDALQKIQE 167 >gi|206602858|gb|EDZ39339.1| Protein of unknown function [Leptospirillum sp. Group II '5-way CG'] Length = 264 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 50/136 (36%), Gaps = 25/136 (18%) Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAA--------KE--------VEIGRYYLK- 202 Q ++V+ Y +S K A ++ +NQLA E +I +Y + Sbjct: 106 QLFEKVVKDYPDSSSAKVAPLFLASIQNQLAQPQKAVNWLHEGLEKNSGDTKILPFYYES 165 Query: 203 -------RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 EY A+ FQ V + A+ A + + Y L A +Q+ Sbjct: 166 LGVTFMSMKEYDQALAMFQKV-TKFQGKTLADAAYYNIGKVYELLNQPALAILNYRKLQK 224 Query: 256 RYPQGYWARYVETLVK 271 ++P WA E +K Sbjct: 225 KFPSSPWASEAEAYIK 240 Score = 35.1 bits (80), Expect = 9.8, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 79/213 (37%), Gaps = 25/213 (11%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L ++A LV + + +++ K + K+ +++ + F + Sbjct: 53 LVGLVALAGVGLVWHIYSDKKKKEQQAAALETRAEQMFSKNMQN-KKADWASIDQLFEKV 111 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV-DYVYYLVGMSYA 142 +D+P + A+ + L A +Q + Q+A + E + + + + Y +G+++ Sbjct: 112 VKDYPDSSSAKVAPLFLASIQNQLAQPQKAVNWLHEGLEKNSGDTKILPFYYESLGVTFM 171 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 M YDQ L ++ + + A +Y IG+ Y Sbjct: 172 SMK---EYDQ-----ALAMFQKVTKF--QGKTLADAAYY-------------NIGKVYEL 208 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + AI ++ + + + A EA A + + Sbjct: 209 LNQPALAILNYRKLQKKFPSSPWASEAEAYIKQ 241 >gi|149193984|ref|ZP_01871082.1| TPR repeat [Caminibacter mediatlanticus TB-2] gi|149135937|gb|EDM24415.1| TPR repeat [Caminibacter mediatlanticus TB-2] Length = 293 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 50/122 (40%), Gaps = 14/122 (11%) Query: 67 FLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 E KA EYF S+++ F + L A + +Y QA + ++ + YP Sbjct: 184 LFNEGKLQKAKEYFLYTLSKNY-FPATSAFYLGEIA---FKNKEYNQALAYYKKSVEIYP 239 Query: 126 E-SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 + + D + Y G+S+ ++ + ++++ Y NS Y K A+ + Sbjct: 240 KKTSFTDKLLYHSGVSFLKL--------GNKEAAKLSFQKLIKDYPNSKYSKIAKKELEK 291 Query: 185 GR 186 + Sbjct: 292 LK 293 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 30/80 (37%), Gaps = 1/80 (1%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEAYVALALMDEARE 248 A +G K EY A+ ++ + Y ++ + +++ L + A+ Sbjct: 208 ATSAFYLGEIAFKNKEYNQALAYYKKSVEIYPKKTSFTDKLLYHSGVSFLKLGNKEAAKL 267 Query: 249 VVSLIQERYPQGYWARYVET 268 + + YP +++ + Sbjct: 268 SFQKLIKDYPNSKYSKIAKK 287 >gi|323963123|gb|EGB58693.1| tol-pal system protein YbgF [Escherichia coli H489] Length = 263 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPF 89 + + + Y A+ +++++ A F +++P Sbjct: 116 SGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPD 175 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK AA + YP+S + VG+ + Sbjct: 176 STYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGV--------IM 227 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ T +++ +Y + K A+ + Sbjct: 228 QDKGDTAKAKAVYQQVISKYLGTDGAKQAQKRLNAM 263 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 44/131 (33%), Gaps = 14/131 (10%) Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + D+ + ++ Y +S Y+ A +++ G Sbjct: 142 ANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWL--------------G 187 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + +G+ A F V+ NY + A +AM ++ +A+ V + +Y Sbjct: 188 QLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKY 247 Query: 258 PQGYWARYVET 268 A+ + Sbjct: 248 LGTDGAKQAQK 258 >gi|253702667|ref|YP_003023856.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21] gi|251777517|gb|ACT20098.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21] Length = 331 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A F S A G+YQ A S E+ + +YP ++ D + Sbjct: 21 AATLFTAGGCSHLGGTFRAASTFEEASGHSDRGEYQTALSSYEQALKKYPAAR--DRALF 78 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 +G+ + Q+ L+ +++ Y S Y + + V N Sbjct: 79 EMGIIH----SHPDNQQKDYGKALECYRTLIKDYPRSSYRQDSEMMVFYLVN 126 Score = 38.9 bits (90), Expect = 0.78, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 6/72 (8%) Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARL--VEAYVALALMD--EAREVVSLIQERYP 258 RGEY A+ ++ L Y + A+ + + ++ D +A E + + YP Sbjct: 52 RGEYQTALSSYEQALKKYP--AARDRALFEMGIIHSHPDNQQKDYGKALECYRTLIKDYP 109 Query: 259 QGYWARYVETLV 270 + + + E +V Sbjct: 110 RSSYRQDSEMMV 121 >gi|290474097|ref|YP_003466973.1| putative periplasmic protein contains a protein prenylyltransferase domain [Xenorhabdus bovienii SS-2004] gi|289173406|emb|CBJ80183.1| putative periplasmic protein contains a protein prenylyltransferase domain [Xenorhabdus bovienii SS-2004] Length = 255 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 9/149 (6%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVAR 94 + + T ++ Y+ AV + + + KA F + +P + Sbjct: 113 TATPSAKTDGNPPAAPTSTGSEKGDYDAAVALAINTKEYDKAISAFQTFVKTYPKSKYLS 172 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 + + Y+ GK AA + YP+S+ Y VG+ + + V Sbjct: 173 NTNYWLGQLNYNKGKKDDAAYYFATVVKDYPKSQKSSDSLYKVGLIMQEKGQKV------ 226 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVT 183 ++V++Y + K A + Sbjct: 227 --KAKAVYQQVVKQYPGTNSAKMAEKKIA 253 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 39/112 (34%), Gaps = 14/112 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + V+ Y S Y+ +++ +G+ A F V Sbjct: 153 KAISAFQTFVKTYPKSKYLSNTNYWLGQLN--------------YNKGKKDDAAYYFATV 198 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + +Y ++ + +++ ++ +A+ V + ++YP A+ E Sbjct: 199 VKDYPKSQKSSDSLYKVGLIMQEKGQKVKAKAVYQQVVKQYPGTNSAKMAEK 250 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 52/144 (36%), Gaps = 25/144 (17%) Query: 88 PFAGVARKSLLMSAFVQY-SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-I 145 P + + K +A + +Y +A S + ++ YP+SK +S + Sbjct: 128 PTSTGSEKGDYDAAVALAINTKEYDKAISAFQTFVKTYPKSKY---------LSNTNYWL 178 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 + Y++ Y + +V+ Y S + + V + ++G+ Sbjct: 179 GQLNYNKGKKDDAAYYFATVVKDYPKSQKSSDSLYKVGLIMQ--------------EKGQ 224 Query: 206 YVAAIPRFQLVLANYSDAEHAEEA 229 V A +Q V+ Y A+ A Sbjct: 225 KVKAKAVYQQVVKQYPGTNSAKMA 248 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 24/66 (36%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + EY AI FQ + Y +++ L + D+A + + + YP+ Sbjct: 146 INTKEYDKAISAFQTFVKTYPKSKYLSNTNYWLGQLNYNKGKKDDAAYYFATVVKDYPKS 205 Query: 261 YWARYV 266 + Sbjct: 206 QKSSDS 211 >gi|163846279|ref|YP_001634323.1| hypothetical protein Caur_0695 [Chloroflexus aurantiacus J-10-fl] gi|222524035|ref|YP_002568505.1| tetratricopeptide repeat-containing protein [Chloroflexus sp. Y-400-fl] gi|163667568|gb|ABY33934.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aurantiacus J-10-fl] gi|222447914|gb|ACM52180.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus sp. Y-400-fl] Length = 1766 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 65/202 (32%), Gaps = 28/202 (13%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++ Y +A FL+ +A P A++ + + A + Sbjct: 7 QDAYTQARTFLEANQIEQAIGLIQHILEHHPDNLEAQR---LLGEAYLAKRDLPAATATF 63 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E+ + P +N+ + +GM+Y Q + + +E + + Sbjct: 64 EQVLQVDP--ENIP-AHVGLGMAYEW--------QGRLDKAIAEFEQALEIRPD---MPE 109 Query: 178 ARFYVTVGRNQLAAKEVEI--------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 R + + E R Y + AI F+ V+A + D +A Sbjct: 110 LRAQLVRLYTEAWGSEHAALRLSRPGLARLYARGHMLPQAIHEFRQVIAEHPD---RLDA 166 Query: 230 MARLVEAYVALALMDEAREVVS 251 L+EA +DEA V Sbjct: 167 WVGLIEALWRDGQLDEAATVCR 188 >gi|254445676|ref|ZP_05059152.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] gi|198259984|gb|EDY84292.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] Length = 890 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 63/180 (35%), Gaps = 31/180 (17%) Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + AR + L V + +A + +++I YP+ K+ + + +S Sbjct: 324 SPQARIAHLDWISVARQMQAWNASALIAQKFIDMYPDDKDAAQALFWIALS--------Q 375 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE---- 205 DQ + + + + +++E + +Y+ L ++ I + Sbjct: 376 IDQNSYQPAIVSLKKLLETNPTRQLEAASHYYLGYCHFMLGQHQIAIASFQQATHSAPDL 435 Query: 206 YVAA------------IPRFQLVLANY---SDAEH----AEEAMARLVEAYVALALMDEA 246 +AA + + + + ++ EA R + A+ AL +DEA Sbjct: 436 PIAAQAQLWIGICQFTTNQLEAAIETFAQIKNSPAHSFLRPEAAYREIAAHYALGNLDEA 495 >gi|118578874|ref|YP_900124.1| hypothetical protein Ppro_0433 [Pelobacter propionicus DSM 2379] gi|118501584|gb|ABK98066.1| TPR repeat-containing protein [Pelobacter propionicus DSM 2379] Length = 254 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 50/127 (39%), Gaps = 18/127 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 A+ +L + ++ ++ N R ++ L V ++ + +QA + + I Sbjct: 144 NLALAYLGKGDYPRSLAELNAILR---GNPRRLEARLSLGRVYFAMDRPEQAIAEYQRVI 200 Query: 122 TQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 Y DY +Y +G++Y + ++++P ++ N+ + A Sbjct: 201 DIYQ-----DYGDAHYHLGLAYLK-VQNIP-------AARNAFREVIRIKPNTELGRSAM 247 Query: 180 FYVTVGR 186 Y+ + + Sbjct: 248 GYLELLK 254 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 52/171 (30%), Gaps = 29/171 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 V +L+ + + A + F D F + + A G Y ++ + + Sbjct: 110 GVAYLELKRWDNAIQQFKIVKDD-LFFEFTENAAINLALAYLGKGDYPRSLAELNAILRG 168 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 P +G Y M R + + R+++ Y A +++ Sbjct: 169 NPRRLE---ARLSLGRVYFAMDR--------PEQAIAEYQRVIDIY---QDYGDAHYHLG 214 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 + YLK AA F+ V+ + E AM L Sbjct: 215 LA--------------YLKVQNIPAARNAFREVIRIKPNTELGRSAMGYLE 251 >gi|126327367|ref|XP_001366386.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 825 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 34/260 (13%), Positives = 75/260 (28%), Gaps = 55/260 (21%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL 98 Q++ L +D + K ++ KA E++ D + +L Sbjct: 468 TQANSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALY 523 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMI 145 + +A ++ + +N V Y + Y Q+I Sbjct: 524 NIGLTYKKLNRLDEALDC---FLKLHAILRNSAQVLYQIANVYEIMEDPNQSIEWLMQLI 580 Query: 146 RDVPYDQRATKL-------------MLQYMSRIVERYT--------------NSPYVKGA 178 VP D RA QY + ++ + + A Sbjct: 581 SVVPTDSRALSKLGELYDNEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKA 640 Query: 179 RF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + + ++ + Y + G Y A+ ++ + + + E + LV Sbjct: 641 IKYFERAALIQPTQVKWQLMVASCYRRSGNYQKALDTYKEIHRKFPE---NVECLRFLVR 697 Query: 236 AYVALALMDEAREVVSLIQE 255 + L E +E + ++ Sbjct: 698 LCTDIGLK-EVQEYATKLKR 716 >gi|109899244|ref|YP_662499.1| tetratricopeptide TPR_2 [Pseudoalteromonas atlantica T6c] gi|109701525|gb|ABG41445.1| Tetratricopeptide TPR_2 [Pseudoalteromonas atlantica T6c] Length = 251 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 46/128 (35%), Gaps = 15/128 (11%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 +Y + + + D + + ++ + NS Y A +++ Sbjct: 132 AYDKAVNLILKD-KLYDDAIPEFQSFLQNFPNSSYASNAHYWLGQLL------------- 177 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + ++ AA +F+ ++ + D+ +AM +L + + A ++ + YP Sbjct: 178 -FNKQDWAAAANQFETLMNQFPDSSKRADAMLKLGICEQERSNIARAEQLWKKVLTEYPT 236 Query: 260 GYWARYVE 267 + E Sbjct: 237 SSARKLAE 244 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 53/147 (36%), Gaps = 9/147 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 + V S + + Y+KAV LK++ + A F ++FP + A + Sbjct: 113 NQTNQVSQPSSQTSLNEDQAYDKAVNLILKDKLYDDAIPEFQSFLQNFPNSSYASNAHYW 172 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + ++ + AA+ E + Q+P+S +G+ ++ Sbjct: 173 LGQLLFNKQDWAAAANQFETLMNQFPDSSKRADAMLKLGIC--------EQERSNIARAE 224 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGR 186 Q +++ Y S K A + + Sbjct: 225 QLWKKVLTEYPTSSARKLAEIKLNAVK 251 >gi|86159741|ref|YP_466526.1| hypothetical protein Adeh_3322 [Anaeromyxobacter dehalogenans 2CP-C] gi|85776252|gb|ABC83089.1| tetratricopeptide repeat protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 1193 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 55/143 (38%), Gaps = 29/143 (20%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +QA +L + I++YP +D V Y +G + ++ R+ P L+ +++++ Sbjct: 160 EQAVALYKAIISRYPSYPRLDEVLYFLGENLSRRDRNDP-------DALKAYRALIQKFP 212 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-------GEYVAAIPRFQLVLANYSDA 223 +S YV A + G YY R G A+ ++ Y ++ Sbjct: 213 SSRYVPDAW--------------MAFGEYYFDRANKNDRNGNLRKALESYRKAAE-YQES 257 Query: 224 EHAEEAMARLVEAYVALALMDEA 246 A+ + + L EA Sbjct: 258 SVYGYALYKQGWVHYNLGNWSEA 280 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 28/72 (38%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D Y +V +++ +A E Q + +P +A KSL +A + Sbjct: 703 DWPASRLAPTAYYNASVDYVRAHRLDRAMEIREQFLQRYPTHQLAPKSLYDNAEAYEAVA 762 Query: 109 KYQQAASLGEEY 120 + +AA E Y Sbjct: 763 DFGRAADHYERY 774 >gi|257059198|ref|YP_003137086.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802] gi|256589364|gb|ACV00251.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802] Length = 810 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 61/198 (30%), Gaps = 46/198 (23%) Query: 59 EVYEK-AVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASL 116 + Y + +A + + + P F ++ GK ++A + Sbjct: 132 QAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNFT----QAYYNLGIALSDQGKLEEAIAA 187 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 ++ I P N YY +G++ DQ + + ++ N Sbjct: 188 YQKAIQLNP---NYADAYYNLGVALF--------DQGKLDEAIAAYQKAIQLDPN----- 231 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 A A + Y K+G+ AI +Q + + L EA Sbjct: 232 DAN----------AYNNLGAALY--KQGKLEEAIAAYQKAIQLNPN----------LAEA 269 Query: 237 YVALA--LMDEAREVVSL 252 Y L L D+ + ++ Sbjct: 270 YNNLGVALSDQGKRDEAI 287 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 37/116 (31%), Gaps = 14/116 (12%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 Y Y V + +A + + + P + Y GK ++A + Sbjct: 198 YADAYYNLGVALFDQGKLDEAIAAYQKAIQLDPNDA---NAYNNLGAALYKQGKLEEAIA 254 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 ++ I P N+ Y +G++ + DQ + + ++ N Sbjct: 255 AYQKAIQLNP---NLAEAYNNLGVALS--------DQGKRDEAIAAYQKAIQLNPN 299 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 18/133 (13%), Positives = 41/133 (30%), Gaps = 28/133 (21%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ- 104 V+ SV + +++++ K +++A F + P A Sbjct: 18 VFTPSVVLSQSIDQLFQQGRTAGKMGKYTEAEAIFRRVIELDP----------NLADAYN 67 Query: 105 ------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 Y GK +A + ++ I P + Y +G + Q + Sbjct: 68 NLGNALYYQGKLDEAIAAYQKAIQLNPNDAD---AYNNLGNALYY--------QGKLEEA 116 Query: 159 LQYMSRIVERYTN 171 + + ++ N Sbjct: 117 IAAYQKAIQLNPN 129 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 14/114 (12%), Positives = 35/114 (30%), Gaps = 14/114 (12%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + Y + + +A + + + P A + + GK +A + Sbjct: 166 QAYYNLGIALSDQGKLEEAIAAYQKAIQLNP--NYA-DAYYNLGVALFDQGKLDEAIAAY 222 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 ++ I P N Y +G + + Q + + + ++ N Sbjct: 223 QKAIQLDPNDAN---AYNNLGAALYK--------QGKLEEAIAAYQKAIQLNPN 265 Score = 39.3 bits (91), Expect = 0.64, Method: Composition-based stats. Identities = 14/110 (12%), Positives = 34/110 (30%), Gaps = 14/110 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + +A + + + P A + YS GK ++A + ++ I Sbjct: 374 NLGLALRNQGKRDEAITAYQKAIQLNP--NFA-LAYNNLGNALYSQGKREEAIAAYQKAI 430 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 P ++Y + + DQ + + ++ N Sbjct: 431 QLNPNF----------ALAYNNLGNALS-DQGKRDEAIAAYQKAIQLNPN 469 >gi|75146761|sp|Q84K11|PPP5_SOLLC RecName: Full=Serine/threonine-protein phosphatase 5; AltName: Full=LePP5 gi|28141004|gb|AAO26213.1| type 5 protein serine/threonine phosphatase 62 kDa isoform [Solanum lycopersicum] gi|28141085|gb|AAO26215.1| type 5 protein serine/threonine phosphatase 62 kDa isoform [Solanum lycopersicum] Length = 556 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 40/137 (29%), Gaps = 23/137 (16%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 ++ E+ + A K +S+A + + + A AF +Y Sbjct: 9 SNASRAEELKQLANEAFKGHKYSQAIDLYTQAIELNGENAVY----YANRAFAHTKLEEY 64 Query: 111 QQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 A G I P Y YY G +Y M K L+ ++ + Sbjct: 65 GSAIQDGTRAIEIDPR-----YSKGYYRRGAAYLAM--------GKFKDALKDFQQVKKL 111 Query: 169 YTNSPYVKGARFYVTVG 185 N P A + Sbjct: 112 CPNDP---DATKKLKEC 125 >gi|317130399|ref|YP_004096681.1| heat shock protein DnaJ domain protein [Bacillus cellulosilyticus DSM 2522] gi|315475347|gb|ADU31950.1| heat shock protein DnaJ domain protein [Bacillus cellulosilyticus DSM 2522] Length = 389 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 56/143 (39%), Gaps = 27/143 (18%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S R Y S + ++ +A+ + + +A FN +P VAR Sbjct: 53 SDESQRAAYDSSGQNDDEYERLFSEAMAMMNNGKYYQASNLFNDIIVRYPGDRVAR---- 108 Query: 99 MSAFVQYSA------GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 Y A +A ++ ++ + + P NVDY+ ++ ++ +DQ Sbjct: 109 -----YYKALSLIEINSSDKALAIAKQLLIEDPN--NVDYME----LTVLAHEKEKNHDQ 157 Query: 153 RATKLMLQYMSRIVERYTN-SPY 174 ++ + ++++RY S Y Sbjct: 158 -----AIRLLEKLIDRYPEKSEY 175 >gi|220933727|ref|YP_002512626.1| hypothetical protein Tgr7_0542 [Thioalkalivibrio sp. HL-EbGR7] gi|219995037|gb|ACL71639.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7] Length = 922 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 42/113 (37%), Gaps = 7/113 (6%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY---VA 208 Q + + R++E S A + R + + V G R A Sbjct: 43 QGGAERAMDTYERVLEEAPPSEMRAEAMRRLADLRQEHSEGRVAEGD----RPAPGTQTA 98 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 I ++ L Y D H + + +L AY + +++ ++ + ++YP+ Sbjct: 99 IIALYEQRLHEYPDHPHNDRVLYQLARAYEHEQQREASQDALTRLAQQYPESP 151 Score = 42.0 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 59/141 (41%), Gaps = 24/141 (17%) Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSY-AQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 +L E+ + +YP+ + D V Y + +Y + R+ D ++R+ ++Y S Sbjct: 100 IALYEQRLHEYPDHPHNDRVLYQLARAYEHEQQREASQD---------ALTRLAQQYPES 150 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 P + A F + + R +Y +A +Q VLA D E A+ + Sbjct: 151 PLLAEAHFRRGET--------LFVDR------DYPSAGDAYQAVLALGDDTGFYEHALYK 196 Query: 233 LVEAYVALALMDEAREVVSLI 253 L + +++ +V+ ++ Sbjct: 197 LGWSLFRQQRHEDSVDVLLVL 217 Score = 39.3 bits (91), Expect = 0.64, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 60/201 (29%), Gaps = 44/201 (21%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + R V+ +A + +A +F + P + +A + Sbjct: 567 EAERRPDMADRLAASVFRQAEVARDAGETDQAIVHFLRV----PEGRFHASAQYDAADLL 622 Query: 105 YSAGKYQQAASLGEEYITQYPESK-------NVDYVY------------YLVGMSYAQ-- 143 + + QAA + E + T+YPE + Y YL S + Sbjct: 623 LAREDWTQAAQVLEGFRTRYPEHPLRLDATRKLAMAYGSAGQPDRAAGEYLRIASASDDP 682 Query: 144 --------MIRDVPYDQRATKLMLQYMSRIVERYTNSPY--VKGARFYVTVGRNQLAAKE 193 + D+ D + + VER+ SP AR + LA+ + Sbjct: 683 AEQREALLLAADLYRDAGDRGREVAVLGDYVERFP-SPLDPAMDARQRLLEA--HLASND 739 Query: 194 VEIGRYYLKRGEYVAAIPRFQ 214 R + AI R Sbjct: 740 ANQVR------RWREAIIRAD 754 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 25/85 (29%), Gaps = 5/85 (5%) Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + Q ++P + L A + + + QYPES + ++ Sbjct: 100 IALYEQRLHEYPDHPHNDRVLYQLARAYEHEQQREASQDALTRLAQQYPESPLLAEAHFR 159 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQY 161 G + V D + Q Sbjct: 160 RGETLF-----VDRDYPSAGDAYQA 179 >gi|79324899|ref|NP_001031534.1| PP5.2 (PROTEIN PHOSPHATASE 5.2); phosphoprotein phosphatase/ protein binding / protein serine/threonine phosphatase [Arabidopsis thaliana] gi|75148953|sp|Q84XU2|PPP5_ARATH RecName: Full=Serine/threonine-protein phosphatase 5 gi|28141302|gb|AAO26216.1| type 5 protein serine/threonine phosphatase 60 kDa isoform [Arabidopsis thaliana] gi|330255078|gb|AEC10172.1| serine/threonine-protein phosphatase 5 [Arabidopsis thaliana] Length = 538 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 41/143 (28%), Gaps = 29/143 (20%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARKSLLMSAFVQ 104 + +DV E +A K +S A + + + + A ++ F Sbjct: 5 NENSDVSRAEEFKSQANEAFKGHKYSSAIDLYTKAIELNSNNAVY--WANRA-----FAH 57 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 +Y A + I + Y YY G +Y M K L+ Sbjct: 58 TKLEEYGSAIQDASKAIEV-----DSRYSKGYYRRGAAYLAM--------GKFKDALKDF 104 Query: 163 SRIVERYTNSPYVKGARFYVTVG 185 ++ N P A + Sbjct: 105 QQVKRLSPNDP---DATRKLKEC 124 >gi|300727193|ref|ZP_07060610.1| conserved hypothetical protein [Prevotella bryantii B14] gi|299775541|gb|EFI72134.1| conserved hypothetical protein [Prevotella bryantii B14] Length = 410 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 15/147 (10%), Positives = 46/147 (31%), Gaps = 34/147 (23%) Query: 61 YEKAVLFLKEQNFSKAYE---------YFNQCSRDFPFAGVARKSLLMSAFVQ-----YS 106 Y A +++++ A + Y ++ A ++ + S + Sbjct: 146 YSNAKDNQEQEDYEYAMQSTDPAVLQSYLDKYKD-------ADQAHIDSIQSHLEILKHK 198 Query: 107 AGKYQQAA-----SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + A S E+YI P+S + I + + + + + Sbjct: 199 DDDWNNAVISGSRSALEDYIRNNPDSPHKQEAL--------NKIDSLDWISASNENTIDA 250 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + + + ++ A + +++ Sbjct: 251 YQQYLSNHVDGIHIDEANEAMKKIKSK 277 >gi|171914075|ref|ZP_02929545.1| hypothetical protein VspiD_22890 [Verrucomicrobium spinosum DSM 4136] Length = 963 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 39/124 (31%), Gaps = 14/124 (11%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGEEYI 121 L + N A + F + A A K L V + + ++ +E I Sbjct: 364 GSLAFESGNIEAAIKAFERAK----LAKDADKERLNYLLGVVLFESQRFDDCRLAFQELI 419 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + S D Y + +SY D + T+ + + Y+ A++ Sbjct: 420 SLNKTSAYKDEAEYRIALSYFFQ-----NDSQKTRKA---LREYIAGNPKGQYLVDAKYR 471 Query: 182 VTVG 185 + Sbjct: 472 LAFI 475 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 31/67 (46%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + K+ + KA F Q +P + K+ + ++++ +YQ+A L E I + Sbjct: 771 GEMLTKKGDAEKAAACFQQLRAKYPNSEFGDKAPVGLGDIEFNNKEYQKALDLYNEAIEK 830 Query: 124 YPESKNV 130 Y S ++ Sbjct: 831 YASSSSI 837 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 37/128 (28%), Gaps = 8/128 (6%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 D +R Y V+ + Q F F + + ++ A + Sbjct: 386 AKDADKERLNYLLGVVLFESQRFDDCRLAFQELISLNKTSAYKDEAEYRIALSYFFQNDS 445 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 Q+ EYI P+ + + Y + Q K ++ + ++V Sbjct: 446 QKTRKALREYIAGNPKGQYLVDAKYRLAFIDFQG--------GDKKDAMEQLEKLVVEAP 497 Query: 171 NSPYVKGA 178 N V Sbjct: 498 NDQNVGQV 505 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 8/70 (11%), Positives = 29/70 (41%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + ++ ++ +Y + + +++A ++F + FP + + + +AG Sbjct: 36 ATSNKDFEAVMYLEGAAHFNLKQWAEAIKFFEDFIKKFPQSNSLNDAKMAVGEAYLNAGN 95 Query: 110 YQQAASLGEE 119 + + +E Sbjct: 96 ADKGIASLKE 105 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 67/184 (36%), Gaps = 35/184 (19%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQR 153 +L A + G++ A + + N D+ V YL G ++ + + Sbjct: 9 ALFSEAQAAFGQGRFDVALQKIG---AIHTATSNKDFEAVMYLEGAAHFNL--------K 57 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGAR--------------FYVTVGRNQLAAKE------ 193 +++ ++++ S + A+ + + A E Sbjct: 58 QWAEAIKFFEDFIKKFPQSNSLNDAKMAVGEAYLNAGNADKGIASLKEAAAVPELRDRAG 117 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA--YVALALMDEAREVVS 251 + I ++ K G+ A+ ++VL + AE+ A L+ + YV D+A +++ Sbjct: 118 LMIAYHHKKGGQPDEALSILEVVLKDLQGTPTAEQQQAILMASEIYVGKGDTDKAGQMME 177 Query: 252 LIQE 255 ++ Sbjct: 178 KLRA 181 >gi|311990281|gb|ADQ26327.1| ser/thr protein phosphatase type 5 [Metarhizium anisopliae] gi|322701465|gb|EFY93214.1| serine/threonine-protein phosphatase 5 [Metarhizium acridum CQMa 102] Length = 475 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 16/130 (12%), Positives = 38/130 (29%), Gaps = 23/130 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 K ++ A +++++ + P ++ Y A + Sbjct: 10 NKGNKSFASGDYPAAIDFYSKAIELNDKDP-TFFTNRAQ-----AYIKTEAYGYAIADAG 63 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + P K + YY G++ ++R K + V N+ A Sbjct: 64 KALELNP--KLIK-AYYRRGLARTAILR--------PKEAIDDFKECVRLDPNNK---DA 109 Query: 179 RFYVTVGRNQ 188 R + + Sbjct: 110 RLKLEECKKI 119 >gi|298372468|ref|ZP_06982458.1| conserved hypothetical protein [Bacteroidetes oral taxon 274 str. F0058] gi|298275372|gb|EFI16923.1| conserved hypothetical protein [Bacteroidetes oral taxon 274 str. F0058] Length = 898 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 25/195 (12%), Positives = 58/195 (29%), Gaps = 32/195 (16%) Query: 94 RKSLLMSAFVQYSAGK--Y------QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +++ A Y+ G Y A E+ +++P+ + +Y Sbjct: 563 QQANQQIADAMYNMGDIFYTKIMDIPSADKTYREFQSRFPKDE-------RKAETYYIEY 615 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR--------FYVTVGRNQLAA--KEVE 195 R + + + R++ Y S Y + +N + ++ Sbjct: 616 RINGTLNKPDEQA-AFRDRLIREYPTSRYAMMLANPNYAANLQKMQQVQNDMYRETYDMY 674 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 I G Y + +L +Y +EH + L + + I Sbjct: 675 I------DGNYNGVKQNYDKMLRDYPLSEHLPRFALLSALSSAKLGQYAASEAELDSIVA 728 Query: 256 RYPQGYWARYVETLV 270 +YP+ + ++ Sbjct: 729 KYPESDITPISKDIL 743 >gi|75907328|ref|YP_321624.1| hypothetical protein Ava_1105 [Anabaena variabilis ATCC 29413] gi|75701053|gb|ABA20729.1| TPR repeat protein [Anabaena variabilis ATCC 29413] Length = 732 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 53/163 (32%), Gaps = 15/163 (9%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E Y++ + +++ +A + F + P K+L+ +Y+ Y+ A + Sbjct: 456 EYYQQGHAAYQVRDYKQAVDNFTHAIQQEPTNA---KALVNRGNARYNLKDYEGALADYT 512 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + P + G S + + +L + + ++ + A Sbjct: 513 VALQINPNEIK---AFVNRGNSRLMLAEYSNDPDQQYRLAIADFNHALKL---NEKEAEA 566 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + R+Q+A + +Y AI F L Sbjct: 567 YIRRGIVRSQMAKYSSDT------IKDYQEAIADFDQALKLNP 603 >gi|222149665|ref|YP_002550622.1| tol-pal system protein YbgF [Agrobacterium vitis S4] gi|221736647|gb|ACM37610.1| tol-pal system protein YbgF [Agrobacterium vitis S4] Length = 333 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 51/137 (37%), Gaps = 16/137 (11%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++++Y+ A + ++ A F +P +G A + QYS +Y+ Sbjct: 209 EQDLYQIAYSHVLSGDYKAAEGEFRDFISRYPKSGKAADANFWLGEAQYSQARYKD---S 265 Query: 117 GEEYITQYPE---SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 E ++ Y + + +GMS A + D + T + + +RY ++ Sbjct: 266 AETFLKAYQSYGKTPKAPEMLLKLGMSLAAL------DNKDT--ACATLREVNKRYPDAS 317 Query: 174 YVKGARFYVTVGRNQLA 190 + + +LA Sbjct: 318 KA--VQNKAASEQKRLA 332 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 36/128 (28%), Gaps = 22/128 (17%) Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Y + S+ K + RY S A F++ + A Sbjct: 212 LYQIAYSHVLS--------GDYKAAEGEFRDFISRYPKSGKAADANFWLGEAQYSQAR-- 261 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 Y + F +Y A E + +L + AL D A + + Sbjct: 262 ------------YKDSAETFLKAYQSYGKTPKAPEMLLKLGMSLAALDNKDTACATLREV 309 Query: 254 QERYPQGY 261 +RYP Sbjct: 310 NKRYPDAS 317 >gi|46580475|ref|YP_011283.1| TPR domain-containing protein [Desulfovibrio vulgaris str. Hildenborough] gi|46449894|gb|AAS96543.1| TPR domain protein [Desulfovibrio vulgaris str. Hildenborough] gi|311234217|gb|ADP87071.1| tol-pal system protein YbgF [Desulfovibrio vulgaris RCH1] Length = 257 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 52/146 (35%), Gaps = 8/146 (5%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 V ++R T Y++A+ L+ +A + F+ +P + Sbjct: 116 VARAVSATRPAAKPVATAAGGASAAYKEALALLERGRPEEARQRFDAFIEAYPSDALQPN 175 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + Y+ +Y A ++ + YP+ + GM+Y ++ D+ Sbjct: 176 AHYWRGEALYAQRRYADAIIDFKDVVASYPKHQKASDSLLKAGMAYQRL-----NDEENA 230 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFY 181 +L + + E+Y +P AR Sbjct: 231 RLQFKALQ---EQYPATPAAVLARKR 253 Score = 42.0 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 33/126 (26%), Gaps = 22/126 (17%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A G+ ++A + +I YP +Y G + R + Sbjct: 144 ALALLERGRPEEARQRFDAFIEAYPSDALQPNAHYWRGEALYAQRRYAD--------AII 195 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 +V Y + + +L +E A +F+ + Y Sbjct: 196 DFKDVVASYPKHQKASDSLLKAGMAYQRLNDEE--------------NARLQFKALQEQY 241 Query: 221 SDAEHA 226 A Sbjct: 242 PATPAA 247 Score = 39.3 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 14/103 (13%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + Q +E Y + A ++ Y +R Y AI F+ Sbjct: 154 EEARQRFDAFIEAYPSDALQPNAHYWRGEAL-------------YAQRR-YADAIIDFKD 199 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 V+A+Y + A +++ + AY L + AR +QE+YP Sbjct: 200 VVASYPKHQKASDSLLKAGMAYQRLNDEENARLQFKALQEQYP 242 >gi|302327544|gb|ADL26745.1| hypothetical protein FSU_2475 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 658 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 79/230 (34%), Gaps = 30/230 (13%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + +Y + + + L + AY FN+ + ++P + +S Sbjct: 279 KALYKVEAYEKQRPHYLVRIGETTLLAGRNADAYVIFNKVNTEYPKTEQSSRS------- 331 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRATKLMLQ 160 ++ G Y+Q+ + Y + MSY R + + ++ Sbjct: 332 YFNMGDYEQSKTQN-----------------YELAMSYYDSSYIARSISEYAQKSRERRN 374 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR-YYLKRGEYVAAIPRFQLVLAN 219 + R+V + + ++ + ++ A E I + LK E +A+ R V+ Sbjct: 375 ALRRLVSMRDRNEEILQSKDSIPNMKSFFA-NEFMIAELFLLKLSEADSAVARLTNVIEK 433 Query: 220 YSDAEHAEEAMARLVEAYVA-LALMDEAREVVSLIQERYPQGYWARYVET 268 D A Y L D A E+ I E+YP +A+ + Sbjct: 434 SDDTASVMRASYARAFIYDEFLHDPDTAEELYKEIIEKYPNTDYAKQAQA 483 >gi|305665011|ref|YP_003861298.1| hypothetical protein FB2170_01881 [Maribacter sp. HTCC2170] gi|88707425|gb|EAQ99670.1| hypothetical protein FB2170_01881 [Maribacter sp. HTCC2170] Length = 1007 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 69/213 (32%), Gaps = 42/213 (19%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-----SAFVQYSAGKYQQAAS 115 Y A K +++ A YFN S+ +G ++ L + KY A Sbjct: 505 YNLAYAHFKLRDYGSAIGYFNSFSK----SGTTDQAKLNDSYLRLGDSYFVTSKYWPALE 560 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + DY + +SY + + ++ + + V RY S Sbjct: 561 TYNKALAL--SGPEKDYAAFQKALSYGFVGKSASK--------IEELDKFVSRYPKSTLK 610 Query: 176 KGA-------------RFYVTVGRNQLAAKE----------VEIGRYYLKRGEYVAAIPR 212 A + ++L + G + A+ + Sbjct: 611 DDALFELGNSYISAGQENKGLIAYDRLIQGYRGSSLVPQAIMRQGLVHYNSNRNEKALGK 670 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 F+ V+ ++ + + A +A+A YV L +DE Sbjct: 671 FKTVVRDFPNTQEAIQAVATAKLVYVDLGRVDE 703 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 58/194 (29%), Gaps = 30/194 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI-T 122 + + ++ A Y + + + Y G + A + I Sbjct: 251 GESYFNLKQYANAIPYLEAYKGKR--GKWSNTDYYLLGYCFYKQGDFVNAIQQFNKIIGG 308 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 S+N YY + Y ++ + + L + + K A Y+ Sbjct: 309 TNSVSQN---AYYHLAECYLKLDKK--------QEALNAFRNASQMDFSDKIQKDA--YL 355 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 A EIG Y L Y + HA+E LV++Y+ Sbjct: 356 NY-----ARLSYEIG------NAYEPVPQVISSYLQQYPNDTHAQEMQELLVDSYITSKN 404 Query: 243 MDEAREVVSLIQER 256 + A E L+++ Sbjct: 405 FEGAME---LLEKN 415 Score = 35.5 bits (81), Expect = 7.2, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 28/75 (37%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 RD+ VTD +E A E N + A + + + FP A K+ A + Sbjct: 709 RDLDFVEVTDTELDNASFESADKQNLEGNTNAAIKGYESYIKQFPNGLHAVKANFNLAQL 768 Query: 104 QYSAGKYQQAASLGE 118 + + + A + Sbjct: 769 YFGKNQKENALPYYK 783 >gi|328947410|ref|YP_004364747.1| hypothetical protein Tresu_0501 [Treponema succinifaciens DSM 2489] gi|328447734|gb|AEB13450.1| hypothetical protein Tresu_0501 [Treponema succinifaciens DSM 2489] Length = 961 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 8/133 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A+L + S+A + F++ F + A +S A + Y+ Y+ AA EY Sbjct: 647 YQIALLNSRIGKISEADKIFSEIQNKFYNSPFADESSFRRADLYYNLRNYETAAMRFSEY 706 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 ++P+ K +D YY SY ++ + + + +VE + S ++ AR Sbjct: 707 QRKFPKGKFIDASYYCSADSYRKLAQ--------IEKSVLQYKILVENFPKSTFIYNARK 758 Query: 181 YVTVGRNQLAAKE 193 ++ + E Sbjct: 759 NLSEIFEEQKKYE 771 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 64/199 (32%), Gaps = 24/199 (12%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A LK +F A + F S+L+ A + + KYQ A E Y Sbjct: 578 ANSALKNFDFENAIVQAKKALSFFSSQEEKENSVLLCASIYSDSEKYQDAIKFLEPYAKN 637 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 S Y + + +++ + S I ++ NSP+ + F Sbjct: 638 --TSVFSIRCRYQIALLNSRI--------GKISEADKIFSEIQNKFYNSPFADESSFRR- 686 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 Y Y A RF + + + + ++Y LA + Sbjct: 687 -------------ADLYYNLRNYETAAMRFSEYQRKFPKGKFIDASYYCSADSYRKLAQI 733 Query: 244 DEAREVVSLIQERYPQGYW 262 +++ ++ E +P+ + Sbjct: 734 EKSVLQYKILVENFPKSTF 752 >gi|251792149|ref|YP_003006869.1| hypothetical protein NT05HA_0353 [Aggregatibacter aphrophilus NJ8700] gi|247533536|gb|ACS96782.1| tetratricopeptide domain protein [Aggregatibacter aphrophilus NJ8700] Length = 396 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 78/200 (39%), Gaps = 32/200 (16%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LD+ + +++++ K A F+ F +A E+ D P A +L A + Sbjct: 103 LDNSPNYTFEQKLLAKQQLARDFMAVGFFDRA-EHLYILMVDEP--EFAEGALQQLAVIY 159 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++++A + E+ P S ++ +Y Y + ++++P + + Q + + Sbjct: 160 QKTKEWKKAINAAEKLAKISPNSNRIELAHY-----YCEYVQNLP--DESKEEPKQILLQ 212 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 ++ N + + Y+K+ EY +A+ + +L +A Sbjct: 213 ALKVSPNCVRAS-----------------MMLADLYIKQKEYKSAVDILENILT--QNAA 253 Query: 225 HAEEAMARLVEAYVALALMD 244 + E + L Y L +D Sbjct: 254 YIGEVLHSLKFCYQQLNQLD 273 >gi|256828297|ref|YP_003157025.1| tol-pal system protein YbgF [Desulfomicrobium baculatum DSM 4028] gi|256577473|gb|ACU88609.1| tol-pal system protein YbgF [Desulfomicrobium baculatum DSM 4028] Length = 318 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 18/143 (12%), Positives = 53/143 (37%), Gaps = 9/143 (6%) Query: 42 SSRDVYLDSVTDVRYQ-REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 S+ + + +E+Y++A+ + +A + + + FP + ++ Sbjct: 181 STPETQPQAAPQAEVPGQELYQQALESFYAMKYKEAQITWAEFVKGFPKDPLVPNAVFWQ 240 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + Y A ++ I ++ S G+S+ ++ +D + Sbjct: 241 GECFFQMQDYANAVLTYQKVIEEHKTSNKYTAALLKQGISFYKLKKD--------QAGKL 292 Query: 161 YMSRIVERYTNSPYVKGARFYVT 183 + +++++ S K A+ Y+ Sbjct: 293 VLEDLIKKHPQSAEAKRAQAYLK 315 >gi|323138992|ref|ZP_08074052.1| tol-pal system protein YbgF [Methylocystis sp. ATCC 49242] gi|322395746|gb|EFX98287.1| tol-pal system protein YbgF [Methylocystis sp. ATCC 49242] Length = 334 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 55/158 (34%), Gaps = 15/158 (9%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 IA LVG E + ++ +E Y++AV L+ F A + Sbjct: 181 LDIAHGRLVGDEPIAPAEIAPPPPAAPPGPKEEYDEAVSSLRAGRFEAAEKSLTTFLSKN 240 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQM 144 P + A + + G++++A E+Y+ Y +S +G S + M Sbjct: 241 PKSKFAPAATFNLGESFFLRGRHREA---AEKYLEISTKYGQSAQAPDALLRLGQSLSAM 297 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTN-SPYVKGARFY 181 A + S I +Y N + +K A Sbjct: 298 --------GAKEQACASFSEIGVKYPNATARIKEAAQR 327 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 39/104 (37%), Gaps = 14/104 (13%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + + ++ + + S + A +G + RG + A ++ Sbjct: 227 EAAEKSLTTFLSKNPKSKFAPAAT--------------FNLGESFFLRGRHREAAEKYLE 272 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + Y + A +A+ RL ++ A+ ++A S I +YP Sbjct: 273 ISTKYGQSAQAPDALLRLGQSLSAMGAKEQACASFSEIGVKYPN 316 >gi|37525409|ref|NP_928753.1| hypothetical protein plu1457 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784837|emb|CAE13750.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 258 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 53/156 (33%), Gaps = 9/156 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA-VLFLKEQNFSKAYEYFNQCSRDFPF 89 A + S ++ Y+ A L + + + KA F + +P Sbjct: 111 ANTASSTASNTKNSGNQASSSVSTGSEKGDYDAAVHLAVNTKEYDKAIIAFQSFVKSYPK 170 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + Y+ GK +AA + +YP+S+ Y VG+ + Sbjct: 171 SSYMPNANYWLGQLNYNKGKKDEAAYYFATVVKEYPKSQKSGESLYKVGL--------IM 222 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ +++++Y S K A ++ Sbjct: 223 QDKGQKDKARSVYQQVMKQYPGSNAAKLAEKKLSTL 258 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 40/112 (35%), Gaps = 14/112 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + V+ Y S Y+ A +++ +G+ A F V Sbjct: 156 KAIIAFQSFVKSYPKSSYMPNANYWLGQLN--------------YNKGKKDEAAYYFATV 201 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + Y ++ + E++ ++ D+AR V + ++YP A+ E Sbjct: 202 VKEYPKSQKSGESLYKVGLIMQDKGQKDKARSVYQQVMKQYPGSNAAKLAEK 253 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 23/60 (38%) Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 EY AI FQ + +Y + + A L + DEA + + + YP+ Sbjct: 150 NTKEYDKAIIAFQSFVKSYPKSSYMPNANYWLGQLNYNKGKKDEAAYYFATVVKEYPKSQ 209 >gi|120602205|ref|YP_966605.1| TPR repeat-containing protein [Desulfovibrio vulgaris DP4] gi|120562434|gb|ABM28178.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris DP4] Length = 257 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 52/146 (35%), Gaps = 8/146 (5%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 V ++R T Y++A+ L+ +A + F+ +P + Sbjct: 116 VARAVSATRPAAKPVATAAGGASAAYKEALALLERGRPEEARQRFDAFIEAYPSDALQPN 175 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + Y+ +Y A ++ + YP+ + GM+Y ++ D+ Sbjct: 176 AHYWRGEALYAQRRYADAIIDFKDVVASYPKHQKASDSLLKAGMAYQRL-----NDEENA 230 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFY 181 +L + + E+Y +P AR Sbjct: 231 RLQFKALQ---EQYPATPAAVLARKR 253 Score = 42.0 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 33/126 (26%), Gaps = 22/126 (17%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A G+ ++A + +I YP +Y G + R + Sbjct: 144 ALALLERGRPEEARQRFDAFIEAYPSDALQPNAHYWRGEALYAQRRYAD--------AII 195 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 +V Y + + +L +E A +F+ + Y Sbjct: 196 DFKDVVASYPKHQKASDSLLKAGMAYQRLNDEE--------------NARLQFKALQEQY 241 Query: 221 SDAEHA 226 A Sbjct: 242 PATPAA 247 Score = 39.3 bits (91), Expect = 0.64, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 14/103 (13%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + Q +E Y + A ++ Y +R Y AI F+ Sbjct: 154 EEARQRFDAFIEAYPSDALQPNAHYWRGEAL-------------YAQRR-YADAIIDFKD 199 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 V+A+Y + A +++ + AY L + AR +QE+YP Sbjct: 200 VVASYPKHQKASDSLLKAGMAYQRLNDEENARLQFKALQEQYP 242 >gi|313141285|ref|ZP_07803478.1| competence lipoprotein [Helicobacter canadensis MIT 98-5491] gi|313130316|gb|EFR47933.1| competence lipoprotein [Helicobacter canadensis MIT 98-5491] Length = 145 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 49/125 (39%), Gaps = 4/125 (3%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 +L+ +Y A +EY ++ + +N+D++ +L + DQ+ + Sbjct: 1 MLILGRAHMQEEEYLLAIFYFDEYTKRFGDGQNIDFINFLKLQANYFAFAKQFRDQQLLE 60 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--EIGRYYLKRGEYVAAIPRFQ 214 ++ ++Y S Y + +LA + EI + Y K+ + AA Q Sbjct: 61 KSIKDAQDFGQKYPYSRYRPIVDTMLLKL--ELANLSLNKEIIKLYDKKDKPQAAEYYQQ 118 Query: 215 LVLAN 219 + N Sbjct: 119 KINEN 123 >gi|94987465|ref|YP_595398.1| N-acetylmuramoyl-L-alanine amidase [Lawsonia intracellularis PHE/MN1-00] gi|94731714|emb|CAJ55077.1| N-acetylmuramoyl-L-alanine amidase [Lawsonia intracellularis PHE/MN1-00] Length = 600 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 48/150 (32%), Gaps = 12/150 (8%) Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 P S Y + Q + + +I + + A +Y V Sbjct: 45 PTSPGARYEEAKKALKNLQSDSINQKLRDPWLKISDLFFKIYTSFPDWINRPFALYYSAV 104 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVA--AIPRFQLVLANYSDAEHAEEAMARLVEAY-VALA 241 ++LA + A AI +Q V+ Y E A+ + + Y L Sbjct: 105 ALDELAKHSFTVSD---------AEKAIKCYQSVITKYPKRTITESALLNIAKVYAERLH 155 Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++A++ + + YP+ + +K Sbjct: 156 KPNDAKKYLQKLLTDYPKSDKINEAQIYLK 185 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 43/128 (33%), Gaps = 10/128 (7%) Query: 45 DVYLDSVTDVRYQREVY--EKAVLFLKEQNFS-----KAYEYFNQCSRDFPFAGVARKSL 97 +Y + +Y A+ L + +F+ KA + + +P + +L Sbjct: 84 KIYTSFPDWINRPFALYYSAVALDELAKHSFTVSDAEKAIKCYQSVITKYPKRTITESAL 143 Query: 98 LMSAFVQY-SAGKYQQAASLGEEYITQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQRAT 155 L A V K A ++ +T YP+S ++ YL + + +T Sbjct: 144 LNIAKVYAERLHKPNDAKKYLQKLLTDYPKSDKINEAQIYLKSLENLKEEPQ-KTSTTST 202 Query: 156 KLMLQYMS 163 + Sbjct: 203 SKAKEAFH 210 >gi|302037718|ref|YP_003798040.1| hypothetical protein NIDE2405 [Candidatus Nitrospira defluvii] gi|300605782|emb|CBK42115.1| conserved protein of unknown function, TPR-like [Candidatus Nitrospira defluvii] Length = 805 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 82/228 (35%), Gaps = 32/228 (14%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 D L+ + + + A+L +++ +A + + +P ++ A + Sbjct: 129 DKVLEKHPQDPQAQAL-KIAMLAQQDK-MDRAIVRGEELIKQYPTEP---DVAILLATLY 183 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM-- 162 G+ Q+A + + +P ++ + Q I D +D +AT+ +L+ M Sbjct: 184 GQMGRLQEARATLHRALQAHPHHLDL--------LRNLQTILDKAHDDKATEQVLRQMIH 235 Query: 163 --------SRIVERYTNSPYVKG-ARFYVTVGRNQLAAKE---VEIGRY-YLKRGEYVAA 209 + R+ + + A + E + + + ++RG+ AA Sbjct: 236 EEPTLYDPRLKLARFFDQRHATDQAEAVLREALTVFPENEQAWLALADFLNIRRGK-DAA 294 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + + A+A L E++ L EA+ V + + Y Sbjct: 295 RVALRQAAEQLPYSTQIPFALAALYESHKDL---AEAKRVYETLAKDY 339 Score = 42.4 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 28/245 (11%), Positives = 73/245 (29%), Gaps = 65/245 (26%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 AL + +++ C + + KA +++ NF KA Sbjct: 18 MIALAVILTLSACGG-----------------PQERKAQYRSKAQDYIQAGNFPKARVAL 60 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQQAASLGEEYITQYPESKNVDYV 133 + P A + ++ A + ++ I P+ K Sbjct: 61 RNVLKIDP----------KDADAYFLVAQVEEKEKNWRNAVANYQQVIEIVPDHKEA--- 107 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 L+ ++ + + + + + +++E++ P + + + ++++ Sbjct: 108 --LIVLAKYYL------EAKLVDEVGRAADKVLEKHPQDPQAQALKIAMLAQQDKMDR-- 157 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 AI R + ++ Y L Y + + EAR + Sbjct: 158 ---------------AIVRGEELIKQYPTEPDVA---ILLATLYGQMGRLQEARATLHRA 199 Query: 254 QERYP 258 + +P Sbjct: 200 LQAHP 204 >gi|197117090|ref|YP_002137517.1| pentapeptide repeat protein [Geobacter bemidjiensis Bem] gi|197086450|gb|ACH37721.1| pentapeptide repeat protein [Geobacter bemidjiensis Bem] Length = 848 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 33/83 (39%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V S +++ +++ + A + + + +P + ++ A Y Sbjct: 44 VPAPSFALDSEDSQIFISGFNAYQKKEYKTAIDSMSVLLKKYPDTPLKDMAIFWLARAHY 103 Query: 106 SAGKYQQAASLGEEYITQYPESK 128 AG Q AA +++ +YPES Sbjct: 104 KAGHQQDAAKYMAQFLREYPESP 126 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 25/61 (40%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 ++ EY AI ++L Y D + A+ L A+ +A + ++ YP+ Sbjct: 66 YQKKEYKTAIDSMSVLLKKYPDTPLKDMAIFWLARAHYKAGHQQDAAKYMAQFLREYPES 125 Query: 261 Y 261 Sbjct: 126 P 126 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 11/84 (13%), Positives = 30/84 (35%), Gaps = 8/84 (9%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y +Y+ A + +YP++ D + + ++ + + +YM++ Sbjct: 66 YQKKEYKTAIDSMSVLLKKYPDTPLKDMAIFWLARAHYKA--------GHQQDAAKYMAQ 117 Query: 165 IVERYTNSPYVKGARFYVTVGRNQ 188 + Y SP + ++ Sbjct: 118 FLREYPESPLKATVEDGLLALADK 141 >gi|116751501|ref|YP_848188.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116700565|gb|ABK19753.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter fumaroxidans MPOB] Length = 1057 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 52/135 (38%), Gaps = 10/135 (7%) Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 +A E+F +C +P + V + A + K+Q E ++ YPES+ Sbjct: 815 QAREWFLRCLNRYPLSPVVDHAAHYVAASYMTENKWQDLIDFYESFLAAYPESRIYPEAL 874 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 Y +G + + + R T + + + V + S A + + + + Sbjct: 875 YEMGAAASLLGR--------TDVASRRYWQAVTFFPESERAGAAAARLVEISSP--GEIL 924 Query: 195 EIGRYYLKRGEYVAA 209 + R Y R ++ +A Sbjct: 925 GVAREYYARKDFFSA 939 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 42/155 (27%), Gaps = 30/155 (19%) Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD---VPYDQRATKLMLQYMSRIV 166 Y +A E P + + ++ R + Sbjct: 778 YHKALRAYERAEAGNPTHGD-------------DTLPGRTPATRPGTTMAQAREWFLRCL 824 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 RY SP + AA + Y+ ++ I ++ LA Y ++ Sbjct: 825 NRYPLSP-----------VVDH-AAH--YVAASYMTENKWQDLIDFYESFLAAYPESRIY 870 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 EA+ + A L D A +P+ Sbjct: 871 PEALYEMGAAASLLGRTDVASRRYWQAVTFFPESE 905 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 42/115 (36%), Gaps = 22/115 (19%) Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +YP S VD+ + V SY + + ++ + + Y S A + Sbjct: 824 LNRYPLSPVVDHAAHYVAASYMTENK--------WQDLIDFYESFLAAYPESRIYPEALY 875 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + + L +V A R+ + + ++E A A ARLVE Sbjct: 876 EMGAAASLLGRTDV--------------ASRRYWQAVTFFPESERAGAAAARLVE 916 >gi|325295455|ref|YP_004281969.1| hypothetical protein Dester_1275 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065903|gb|ADY73910.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 597 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 58/172 (33%), Gaps = 49/172 (28%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF--------------------- 102 ++LKE+++ KA ++ + P A K + + Sbjct: 239 GKIYLKEKDYKKAEKFLEKVLDKNPDNIYALK-EIFIIYLKQNKTNEALNVINRLVKLDP 297 Query: 103 -----------VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 + +Y++ L E P++ N VY+++G++Y Sbjct: 298 YNLRLLSWVAASLFEMKEYKKVIPLIERITKLNPDNPN---VYFMLGLAYEMS------- 347 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 + L+ + ++ Y +P V ++ N+L+ + Y +R Sbjct: 348 -GNYEKALEAYEKSLDLYPENPTVLEKTAFLLYKMNRLSD-----AKAYFER 393 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 35/251 (13%), Positives = 90/251 (35%), Gaps = 36/251 (14%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 +A ++ ++ + Y ++ + A L++ E+ + +A + + + +P Sbjct: 136 LLAGISIIKGNKKEAERYYKRILSTAPDKSTYIMLANLYINEKKYLEAQKLLTEALKKYP 195 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 + L V + GK A + E+ I P ++ Y L+G Y + Sbjct: 196 -SDFLINYFL--GEVSFLKGKINTARNYIEKAIKLNPNFES---AYVLLGKIYLK----- 244 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR-------YYL 201 ++ K +++ +++++ ++ Y ++ + + + + Y L Sbjct: 245 ---EKDYKKAEKFLEKVLDKNPDNIYALK-EIFIIYLKQNKTNEALNVINRLVKLDPYNL 300 Query: 202 KRGEYVAA----IPRFQLVL-------ANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 + +VAA + ++ V+ D + L AY ++A E Sbjct: 301 RLLSWVAASLFEMKEYKKVIPLIERITKLNPDNPNVY---FMLGLAYEMSGNYEKALEAY 357 Query: 251 SLIQERYPQGY 261 + YP+ Sbjct: 358 EKSLDLYPENP 368 >gi|310822253|ref|YP_003954611.1| social gliding motility protein tgl [Stigmatella aurantiaca DW4/3-1] gi|309395325|gb|ADO72784.1| Social gliding motility protein Tgl [Stigmatella aurantiaca DW4/3-1] Length = 250 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 39/133 (29%), Gaps = 21/133 (15%) Query: 62 EKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++L + + +A + Q +P +A+ + + G +A + Sbjct: 105 NLGNVYLDQGRYDEAIRTYEQVLNDMLYPTPFIAQS---NLGWAYFKKGDTAKALENIKS 161 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR-ATKLMLQYMSRIVERYTNSPYVKGA 178 +T P YDQ T+ + SR E + V A Sbjct: 162 AVTLNPN------------FCRGYQNLGFIYDQTGDTEEACRQFSRYREMCPD---VADA 206 Query: 179 RFYVTVGRNQLAA 191 V + ++ Sbjct: 207 YMREGVCQAKMGK 219 >gi|89053468|ref|YP_508919.1| hypothetical protein Jann_0977 [Jannaschia sp. CCS1] gi|88863017|gb|ABD53894.1| hypothetical protein Jann_0977 [Jannaschia sp. CCS1] Length = 281 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 47/137 (34%), Gaps = 28/137 (20%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 +++ Y++A L E F+ A F +P + ++ A Y G+ A Sbjct: 157 AEQQDYDRASLAFDEGRFADASVAFQTFVDTYPGSPLS-------ADAHYLRGE---AEV 206 Query: 116 LGEE-------YITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + ++ + P+ +G++ AQ+ + +S + Sbjct: 207 NLDRWNPAARAFLASFSAAPDGPRAPIALTSLGVALAQI--------GQPEEACLTLSEV 258 Query: 166 VERYTNSPYVKGARFYV 182 RY S V A+ + Sbjct: 259 GVRYPGSASVADAQAEM 275 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 39/128 (30%), Gaps = 20/128 (15%) Query: 138 GMSYAQMIRDVPY-----DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 G++ A+ +D D+ V+ Y SP A R Sbjct: 153 GLAVAEQ-QDYDRASLAFDEGRFADASVAFQTFVDTYPGSPLSADAH----YLRG----- 202 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E E+ + A F + D A A+ L A + +EA +S Sbjct: 203 EAEV-----NLDRWNPAARAFLASFSAAPDGPRAPIALTSLGVALAQIGQPEEACLTLSE 257 Query: 253 IQERYPQG 260 + RYP Sbjct: 258 VGVRYPGS 265 >gi|281204170|gb|EFA78366.1| hypothetical protein PPL_09017 [Polysphondylium pallidum PN500] Length = 1421 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 7/82 (8%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-MSAFVQYSAGKYQQAASL 116 + ++A++ +Q++ A F +P K+ L A + Y A KY+ + Sbjct: 143 EALLQQALILYDKQSYKSALPLFENVLSLYPQ----EKTTLYKLADIYYQAKKYELSQKY 198 Query: 117 GEEYITQYPESKNVDYVYYLVG 138 E + + +K+ DY YL+G Sbjct: 199 IELALKYH--AKDKDYTLYLLG 218 >gi|120554521|ref|YP_958872.1| TPR repeat-containing protein [Marinobacter aquaeolei VT8] gi|120324370|gb|ABM18685.1| Tetratricopeptide TPR_2 repeat protein [Marinobacter aquaeolei VT8] Length = 939 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 28/75 (37%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +Y++ + + + A +F + P + +A K+ +A A + A + Sbjct: 593 ASAIYQQGEKAARAGDATLAVAHFQRVEGVMPGSEIAIKARYDAANTLLRASDWLAAINE 652 Query: 117 GEEYITQYPESKNVD 131 + + YP + Sbjct: 653 LQRFRIDYPSHELTP 667 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 13/113 (11%), Positives = 40/113 (35%), Gaps = 7/113 (6%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y+ A ++ Q +P + + ++ A +SAG+Y +A + + Sbjct: 135 LYQMAKAHALTGQPEQSIARLKQLVGLYPNSELVPEARFRIAEAAFSAGRYAEAEAGYRQ 194 Query: 120 YITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + + + Y++G S + + + + + ++ + Sbjct: 195 LLE-HDSHQELAAKARYMLGWSQFKQGN-----PAWARASASFTAVLDQQLPD 241 Score = 35.5 bits (81), Expect = 8.5, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 34/115 (29%), Gaps = 15/115 (13%) Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + + Q L + + R+ S AR + Sbjct: 591 QLASAIYQQGEKAAR-AGDATLAVAHFQRVEGVMPGSEIAIKAR--------------YD 635 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 L+ +++AAI Q +Y E E +LV AY +A E + Sbjct: 636 AANTLLRASDWLAAINELQRFRIDYPSHELTPETSEKLVLAYQESGQGLKAAEEL 690 >gi|262372263|ref|ZP_06065542.1| conserved hypothetical protein [Acinetobacter junii SH205] gi|262312288|gb|EEY93373.1| conserved hypothetical protein [Acinetobacter junii SH205] Length = 287 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 17/120 (14%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209 Q K +Q M ++ + N YV A F++ +YL +Y AA Sbjct: 181 QGGAKKAIQPMQNFIKNHPNGIYVGNAYFWL--------------AEFYLAVEPVDYKAA 226 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + +V Y ++ A A+ +L A A + + + +YPQ A++++ Sbjct: 227 KQNYNIVATRYPNSAKAPRAIYQLYSIAKEVDKNTALANQYKNKLISQYPQTEEAKFIQK 286 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 46/132 (34%), Gaps = 9/132 (6%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--K 109 + + ++ Y A+ K+ KA + ++ P + A + Sbjct: 163 SQIELEKAAYTVALDAYKQGGAKKAIQPMQNFIKNHPNGIYVGNAYFWLAEFYLAVEPVD 222 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ A T+YP S Y + + ++V + T L QY ++++ +Y Sbjct: 223 YKAAKQNYNIVATRYPNSAKAPRAIYQL----YSIAKEVD---KNTALANQYKNKLISQY 275 Query: 170 TNSPYVKGARFY 181 + K + Sbjct: 276 PQTEEAKFIQKK 287 Score = 39.3 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 31/145 (21%) Query: 95 KSLLMSAFVQ------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 + L A Y G ++A + +I +P V Y+ + + + V Sbjct: 164 QIELEKA-AYTVALDAYKQGGAKKAIQPMQNFIKNHPNGIYVGNAYFWLA-EFYLAVEPV 221 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 Y K Q + + RY NS A + + I + + + A Sbjct: 222 DY-----KAAKQNYNIVATRYPNSAKAPRAIYQL-----------YSIAK---EVDKNTA 262 Query: 209 AIPRFQL-VLANYSDAEHAEEAMAR 232 +++ +++ Y EEA Sbjct: 263 LANQYKNKLISQYPQT---EEAKFI 284 >gi|115379501|ref|ZP_01466595.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca DW4/3-1] gi|115363479|gb|EAU62620.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca DW4/3-1] Length = 212 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 37/139 (26%), Gaps = 22/139 (15%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + A G + + + Q P + D Y G+ +I D Sbjct: 92 AEFEQAVAALRTGNVEAGVVRLQAFAEQNPRHAHADNALYFSGL---GLIGLKDLD---- 144 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + R++ Y V + R LK + A + Sbjct: 145 -GASRLFERLINNYPAGDAVLDGMLRLAECR--------------LKLKQPEDARALYTR 189 Query: 216 VLANYSDAEHAEEAMARLV 234 V+ + A +A RL Sbjct: 190 VITQFPGTAAATQAEQRLA 208 Score = 42.0 bits (98), Expect = 0.092, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 27/77 (35%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + +Y + + ++ A F + ++P +L A + + Sbjct: 120 NPRHAHADNALYFSGLGLIGLKDLDGASRLFERLINNYPAGDAVLDGMLRLAECRLKLKQ 179 Query: 110 YQQAASLGEEYITQYPE 126 + A +L ITQ+P Sbjct: 180 PEDARALYTRVITQFPG 196 Score = 39.3 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 39/146 (26%), Gaps = 8/146 (5%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 + D + +E+AV L+ N + P A +L Sbjct: 73 SSAPADAPASEPVNTALLDAEFEQAVAALRTGNVEAGVVRLQAFAEQNPRHAHADNALYF 132 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 S A+ L E I YP V + + + + + Sbjct: 133 SGLGLIGLKDLDGASRLFERLINNYPAGDAV--------LDGMLRLAECRLKLKQPEDAR 184 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVG 185 +R++ ++ + A + Sbjct: 185 ALYTRVITQFPGTAAATQAEQRLASL 210 >gi|256828286|ref|YP_003157014.1| tol-pal system protein YbgF [Desulfomicrobium baculatum DSM 4028] gi|256577462|gb|ACU88598.1| tol-pal system protein YbgF [Desulfomicrobium baculatum DSM 4028] Length = 350 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 50/137 (36%), Gaps = 11/137 (8%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + Y +A+ + + A E F R+FP + +L + Y+ +Y +A Sbjct: 215 SPEQEYARALKSYQNGRHALAREQFAAFMRNFPRHRLLPNALYWTGETWYAEARYDRAMK 274 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-- 173 + + +P L ++Y+ + Q + Y+ ++ RY +SP Sbjct: 275 YFTQVVQDHPRHGKSADAL-LK-LAYSALR------QGQHEQAGVYLQQLEVRYPDSPAS 326 Query: 174 -YVKGARFYVTVGRNQL 189 + AR + + Sbjct: 327 RLGRQARGRIQGCSEFI 343 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 37/123 (30%), Gaps = 22/123 (17%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G++ A ++ +P + + Y G ++ R ++Y ++ Sbjct: 227 YQNGRHALAREQFAAFMRNFPRHRLLPNALYWTGETWYAEAR--------YDRAMKYFTQ 278 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +V+ + A + + E YL Q + Y D+ Sbjct: 279 VVQDHPRHGKSADALLKLAYSALRQGQHEQ--AGVYL------------QQLEVRYPDSP 324 Query: 225 HAE 227 + Sbjct: 325 ASR 327 Score = 40.1 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 44/138 (31%), Gaps = 25/138 (18%) Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 S +Y + Q R L + + + + + A ++ Sbjct: 215 SPEQEYA---RALKSYQNGRHA--------LAREQFAAFMRNFPRHRLLPNALYW----- 258 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 G + Y A+ F V+ ++ + +A+ +L + + ++A Sbjct: 259 ---------TGETWYAEARYDRAMKYFTQVVQDHPRHGKSADALLKLAYSALRQGQHEQA 309 Query: 247 REVVSLIQERYPQGYWAR 264 + ++ RYP +R Sbjct: 310 GVYLQQLEVRYPDSPASR 327 >gi|254428223|ref|ZP_05041930.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881] gi|196194392|gb|EDX89351.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881] Length = 970 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 82/253 (32%), Gaps = 38/253 (15%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREV--------------YEKAVLFLKEQNFSK 75 +A+ L G + D +D T ++ +E+ Y + + + + K Sbjct: 123 LALLDLAGTMSPTLADEDVDYSTAIQLYQELLNSTNDANERAEAYYLLSKAYAMDGDLDK 182 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + +P + A +S + +S G Y+ A + I + ++ + Y Sbjct: 183 ARSSLDSLVEQYPNSEWALESQFRRGEMLFSEGDYEYAEKAYADVIERGERNEFYNQALY 242 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIV----------ERYTNSPYVKGA------- 178 G SY ++ + Q + +L ++ + + ++ V Sbjct: 243 KHGWSYYKL-GEYERAQDSFFTLLDNLNGQAVLADNTSMESKLFVDTQRVVSLSFSNLNG 301 Query: 179 --RFYVTVGRNQLAAKEVEI----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 RN E I G YL + + A + + + Y D+ A E Sbjct: 302 AKSVKAWFARNGNRDYEPAIYRTLGDVYLNQERFRDAAETYDMFVQVYPDSRLAPEFSTL 361 Query: 233 LVEAYVALALMDE 245 +E+Y Sbjct: 362 QIESYQKGGFPTL 374 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 30/58 (51%) Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 Y AI +Q +L + +DA EA L +AY +D+AR + + E+YP WA Sbjct: 143 YSTAIQLYQELLNSTNDANERAEAYYLLSKAYAMDGDLDKARSSLDSLVEQYPNSEWA 200 >gi|158521061|ref|YP_001528931.1| hypothetical protein Dole_1044 [Desulfococcus oleovorans Hxd3] gi|158509887|gb|ABW66854.1| hypothetical protein Dole_1044 [Desulfococcus oleovorans Hxd3] Length = 318 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 14/99 (14%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + + + + +R ++I R +LK G+ AA+ RF+ + Sbjct: 49 RAVTAYETFLYFFPDHEQTEYSR--------------LQIARAFLKTGKTEAALERFEKI 94 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + S + EA Y AL + D A ++SL+ E Sbjct: 95 YSEGSGTQFQVEAGFMAARCYTALGMKDRALSMLSLVGE 133 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 18/61 (29%), Gaps = 3/61 (4%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 F K + +A + FP S L A GK + A E + Sbjct: 38 GDHFFKSGEYDRAVTAYETFLYFFPDHEQTEYSRLQIARAFLKTGKTEAAL---ERFEKI 94 Query: 124 Y 124 Y Sbjct: 95 Y 95 >gi|254460928|ref|ZP_05074344.1| hypothetical protein RB2083_1519 [Rhodobacterales bacterium HTCC2083] gi|206677517|gb|EDZ42004.1| hypothetical protein RB2083_1519 [Rhodobacteraceae bacterium HTCC2083] Length = 281 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 46/132 (34%), Gaps = 14/132 (10%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ ++ A + + + + A F ++++P + + ++ L ++G A Sbjct: 158 EQADFDAANVLMTSGDAAGAAAQFGLFTQNYPGSPLEGQARLKQGEAHEASGD---AREA 214 Query: 117 GEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 Y+ Y P S+ Y +G + ++ + + R+ + Sbjct: 215 ARAYLEAYSRDPSSEIAPDALYRLGRTLGRL--------GKVSEACVTLGEVDVRHPGTL 266 Query: 174 YVKGARFYVTVG 185 A+ +T Sbjct: 267 AASEAQAEMTTL 278 >gi|189424078|ref|YP_001951255.1| hypothetical protein Glov_1012 [Geobacter lovleyi SZ] gi|189420337|gb|ACD94735.1| hypothetical protein Glov_1012 [Geobacter lovleyi SZ] Length = 432 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 33/72 (45%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ +A + +++ + + +Q + FP + + SLLM A QY +G AA + Sbjct: 38 LFMEAFTAFQGKDYLHSIDKLHQMEQLFPDSPLRDVSLLMLARAQYRSGDNDNAAQTILK 97 Query: 120 YITQYPESKNVD 131 + ++ D Sbjct: 98 FNKEFGNGPLAD 109 >gi|58698208|ref|ZP_00373129.1| TPR domain protein [Wolbachia endosymbiont of Drosophila ananassae] gi|225630870|ref|YP_002727661.1| TPR domain protein [Wolbachia sp. wRi] gi|58535289|gb|EAL59367.1| TPR domain protein [Wolbachia endosymbiont of Drosophila ananassae] gi|225592851|gb|ACN95870.1| TPR domain protein [Wolbachia sp. wRi] Length = 291 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 35/92 (38%), Gaps = 6/92 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 S + + ++Y KA + + A NQ FP+ + +L+ Sbjct: 76 KSDKFNIKIAQNSGKSFDIYSTLKKAKDSFESGDNETAISLLNQIIAKFPYH---KNALI 132 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + Y+ +Y++A + + ++P + + Sbjct: 133 GLGNIYYANKEYKKAVEIYTRLLKEHPSNPYI 164 >gi|99035109|ref|ZP_01314895.1| hypothetical protein Wendoof_01000269 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 291 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 35/92 (38%), Gaps = 6/92 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 S + + ++Y KA + + A NQ FP+ + +L+ Sbjct: 76 KSDKFNIKIAQNSGKSFDIYSTLKKAKDSFESGDNETAISLLNQIIAKFPYH---KNALI 132 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + Y+ +Y++A + + ++P + + Sbjct: 133 GLGNIYYANKEYKKAVEIYTRLLKEHPSNPYI 164 >gi|42521001|ref|NP_966916.1| TPR domain-containing protein [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410742|gb|AAS14850.1| TPR domain protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 291 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 35/92 (38%), Gaps = 6/92 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 S + + ++Y KA + + A NQ FP+ + +L+ Sbjct: 76 KSDKFNIKIAQNSGKSFDIYSTLKKAKDSFESGDNETAISLLNQIIAKFPYH---KNALI 132 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + Y+ +Y++A + + ++P + + Sbjct: 133 GLGNIYYANKEYKKAVEIYTRLLKEHPSNPYI 164 >gi|58697396|ref|ZP_00372714.1| TPR domain protein [Wolbachia endosymbiont of Drosophila simulans] gi|58536197|gb|EAL59768.1| TPR domain protein [Wolbachia endosymbiont of Drosophila simulans] Length = 267 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 35/92 (38%), Gaps = 6/92 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 S + + ++Y KA + + A NQ FP+ + +L+ Sbjct: 52 KSDKFNIKIAQNSGKSFDIYSTLKKAKDSFESGDNETAISLLNQIIAKFPYH---KNALI 108 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + Y+ +Y++A + + ++P + + Sbjct: 109 GLGNIYYANKEYKKAVEIYTRLLKEHPSNPYI 140 >gi|258592131|emb|CBE68436.1| protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 235 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 25/162 (15%) Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + +P A ++ L Y+ GKY +A + Y+ + P L+ Sbjct: 94 RLLHDVVHRYPGTAAAAEATLRLGTYYYTVGKYNEARTAYTTYLEKNPRG--------LI 145 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 S + D +R ++ SR++E++ P + A+ + + Sbjct: 146 AFSAGLGVGDTYLAERNNDKAVETYSRLIEQFAQEPLLPEAQ--------------LHLA 191 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 R Y G A ++ ++A + + A+ A E+Y + Sbjct: 192 RAYRGMGRLKDAGALYEQIVATHPNTGWAQRA---QAESYRS 230 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 44/166 (26%), Gaps = 37/166 (22%) Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 + +I D L+ + +V RY + A L Sbjct: 67 ALLRKAVGQLDVILRSGSDDAKQTEGLRLLHDVVHRYPGTAAAAEATLR-------LGTY 119 Query: 193 EVEIGRYYLKRGEYVA------------------------------AIPRFQLVLANYSD 222 +G+Y R Y A+ + ++ ++ Sbjct: 120 YYTVGKYNEARTAYTTYLEKNPRGLIAFSAGLGVGDTYLAERNNDKAVETYSRLIEQFAQ 179 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 EA L AY + + +A + I +P WA+ + Sbjct: 180 EPLLPEAQLHLARAYRGMGRLKDAGALYEQIVATHPNTGWAQRAQA 225 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 28/63 (44%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 +L E+N KA E +++ F + ++ L A G+ + A +L E+ + Sbjct: 154 GDTYLAERNNDKAVETYSRLIEQFAQEPLLPEAQLHLARAYRGMGRLKDAGALYEQIVAT 213 Query: 124 YPE 126 +P Sbjct: 214 HPN 216 >gi|224370792|ref|YP_002604956.1| TPR repeat family protein [Desulfobacterium autotrophicum HRM2] gi|223693509|gb|ACN16792.1| TPR repeat family protein [Desulfobacterium autotrophicum HRM2] Length = 850 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 43/129 (33%), Gaps = 16/129 (12%) Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 YYL YA ++ P D RA + + Y +SP + A + + +L Sbjct: 266 AYYLRA--YAALMTADPEDSRANLTAMAAFQDALVAYPDSPLLPFALAGLGIVHTRL--- 320 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 AA F ++ +Y D + + L Y A D+A Sbjct: 321 -----------KNPAAAEGFFAIIRDHYRDYPGLAQVLYHLGLIYDAKGYNDQALAYFKE 369 Query: 253 IQERYPQGY 261 + E P+ Sbjct: 370 VFEDLPENS 378 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 65/218 (29%), Gaps = 30/218 (13%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV-ARKSLLMSAF 102 ++V+ D + K++ + + + + + P + + LL Sbjct: 368 KEVFEDLPENSSVVDAGIGIGKALFKKRFYLDSLKILTELIKSNPEKTYDSPELLLSIGR 427 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + GK A + +P+ D M A + D + K Sbjct: 428 SSFELGKTANARENFMRVLNLFPDIPGKD-------MILADIAETYAVD-KDNKRAESVY 479 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKE--------------------VEIGRYYLK 202 +++ Y + + + +A K+ + + Y K Sbjct: 480 RLVIKTYPGGEGFLNSSMGLALLVTDMAEKKAIYEMVKRDFTDHILAGVAMMRLAEIYEK 539 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 G Y I + +LA + EA+ + AY AL Sbjct: 540 EGAYADCIKEIENLLATHPQ-GLRYEAVKLMQRAYEAL 576 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 66/239 (27%), Gaps = 46/239 (19%) Query: 57 QREVYEKAVLFLKEQNFSK------AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + Y +A L + A F +P + + +L V Sbjct: 264 EPAYYLRAYAALMTADPEDSRANLTAMAAFQDALVAYPDSPLLPFALAGLGIVHTRLKNP 323 Query: 111 QQAASLGEEY---ITQYPES-KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 + E + I + + V Y +G+ Y L Y + Sbjct: 324 ----AAAEGFFAIIRDHYRDYPGLAQVLYHLGLIYDAK--------GYNDQALAYFKEVF 371 Query: 167 ERYTNSPYVKGA---------RFY--------VTVGRNQLAAK-----E--VEIGRYYLK 202 E + V A + +T K E + IGR + Sbjct: 372 EDLPENSSVVDAGIGIGKALFKKRFYLDSLKILTELIKSNPEKTYDSPELLLSIGRSSFE 431 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 G+ A F VL + D + +A + E Y A V L+ + YP G Sbjct: 432 LGKTANARENFMRVLNLFPDIPGKDMILADIAETYAVDKDNKRAESVYRLVIKTYPGGE 490 >gi|289548835|ref|YP_003473823.1| hypothetical protein Thal_1064 [Thermocrinis albus DSM 14484] gi|289182452|gb|ADC89696.1| Tetratricopeptide TPR_2 repeat protein [Thermocrinis albus DSM 14484] Length = 538 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 67/195 (34%), Gaps = 32/195 (16%) Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + + + + + LL+ A +Y +A L + P++ + Y YL+ Sbjct: 96 KAMSALEEGYRVVPDSPQILLLLADEYMRRSQYDKATPLLQRLSELNPQNP-LPY--YLL 152 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 Y Q K ++Y+ + + A + +G Sbjct: 153 ARLYMA--------QGDQKKAIEYLEKSLRVKPTFE----------------AGF-ITLG 187 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 Y RGE A ++ +L + A+ RL Y + +EA+E + + Y Sbjct: 188 GLYESRGELSKAETLYKSILEKDPNNRV---ALERLASLYASSGRWEEAKETYRKLIDLY 244 Query: 258 PQGYW-ARYVETLVK 271 P + +Y L+K Sbjct: 245 PDSGYQYQYALVLIK 259 >gi|282163495|ref|YP_003355880.1| hypothetical protein MCP_0825 [Methanocella paludicola SANAE] gi|282155809|dbj|BAI60897.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 192 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 24/68 (35%), Gaps = 1/68 (1%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMDEAREVVSLIQERYPQ 259 K ++ A F V + D+E A EA+ A Y + + + +YP Sbjct: 121 FKNKDWDRAERCFNSVAERFPDSEEAPEALYYTGVARYEKTHDATDLADTSKKLNAKYPN 180 Query: 260 GYWARYVE 267 W + Sbjct: 181 SSWTKKAS 188 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 5/80 (6%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 ++ + K +++ +A FN + FP + A ++L + +Y K Sbjct: 104 PPGDFCAEMLFAEGRAAFKNKDWDRAERCFNSVAERFPDSEEAPEALYYTGVARY--EKT 161 Query: 111 QQAASLGEEYITQ---YPES 127 A L + YP S Sbjct: 162 HDATDLADTSKKLNAKYPNS 181 >gi|148658023|ref|YP_001278228.1| hypothetical protein RoseRS_3925 [Roseiflexus sp. RS-1] gi|148570133|gb|ABQ92278.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1] Length = 1180 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 27/208 (12%), Positives = 47/208 (22%), Gaps = 35/208 (16%) Query: 57 QREVYEKAVLFLKEQNFSKAYE-YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + A A A +LL + G +A Sbjct: 994 PEAYFGLAQAEYGAGRIEDALRNATRALELR---PRYAEAALL-LGKIYERQGYSMRALE 1049 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + I P + +Y + + R + + N Sbjct: 1050 AYKRAIDINPR---LAEPHYRRALLLIRADR--------LNEAREELEVATRLDPN---- 1094 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 A +GR Y + AA+ RF+ + EA Sbjct: 1095 -------------FAEAHYWLGRVYFAQRNIQAALNRFREAVNR--QGGAYPEARYYQGL 1139 Query: 236 AYVALALMDEAREVVSLIQERYPQGYWA 263 A L ++ A + + WA Sbjct: 1140 AEEQLGDLNAAIRSFETVANQSDDTPWA 1167 >gi|310823716|ref|YP_003956074.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309396788|gb|ADO74247.1| Tetratricopeptide repeat domain protein [Stigmatella aurantiaca DW4/3-1] Length = 370 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 13/114 (11%), Positives = 34/114 (29%), Gaps = 22/114 (19%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQ-------------------REVYEKAVLFLK 69 + + L G S R++ E++ Sbjct: 1 MVGLLGLAGCRTTGSGARQETPAPATRHEVEFEPVTVTGDLELERLNDEELFAGGTSAFA 60 Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++F +A YF + + P + R++L + ++++A + + Sbjct: 61 AEDFKQAARYFGRLADFHPQSSHRRQALYNAGLAHQRLKEWEEA---YQRFSEL 111 Score = 35.5 bits (81), Expect = 8.1, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 14/102 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K +Y R+ + + S + + A + + +L E+ A R Sbjct: 62 EDFKQAARYFGRLADFHPQSSHRRQALYNAGLAHQRL--------------KEWEEAYQR 107 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 F + + A +A RL E L +EA + ++ Sbjct: 108 FSELADAAAGQGEALDAAFRLAETQYHLERFEEAAAQLRVLA 149 >gi|332992287|gb|AEF02342.1| type IV pilus biogenesis/stability protein PilW [Alteromonas sp. SN2] Length = 342 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 82/273 (30%), Gaps = 54/273 (19%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 I AV FL G S Y + + + +LK N+ +A +Q Sbjct: 3 IGLIAAVIFLAGCVSNSQPGSYNSNFDRQEAAKTRMSLGLTYLKNNNYKQAKVNLDQALE 62 Query: 86 DFPFAGVARKSLLMSAFVQYSA--GKYQQAASLGEEYITQYPESKNV------------D 131 P R + + A Y G ++A L + ++ P + ++ D Sbjct: 63 YDP-----RSAEVNYAIAYYYQLVGDVKRADDLYQTAMSLAPYNGDIANSYGAFKCQDGD 117 Query: 132 Y----VYYLVGMSYAQMIRDVP---------YDQRATKLMLQYMSRIVERYTNSPYVKGA 178 Y Y+L +S Q Q + Y ++ Sbjct: 118 YEDAKEYFLKAVSNQQYANSAETYENLALCAQSQGNVDDAITYFQSALKHQP-------L 170 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEAY 237 R E+ I ++ +A + L Y A+ + +++ E + Sbjct: 171 RAKSLYLLT-----ELYIA-----TEQWTSA----KYTLDKYQRVAKPSPDSLWLSFEIH 216 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + A+EV + +P + + ++ Sbjct: 217 QGTNDWEGAKEVGYKLSTLFPDSPYTADYKNIL 249 >gi|323699326|ref|ZP_08111238.1| cell wall hydrolase/autolysin [Desulfovibrio sp. ND132] gi|323459258|gb|EGB15123.1| cell wall hydrolase/autolysin [Desulfovibrio desulfuricans ND132] Length = 600 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 45/144 (31%), Gaps = 18/144 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQ 112 + + A N+ K E F+ C + P A K+L V G +++ Sbjct: 49 LVKDARKAKYRSNWQKVEETFSLCLKTAPNGPYAPKALYYIGRVYEELGAQSGLKSDFRK 108 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A + +YP D + YA+ + + T ++ I+ Y S Sbjct: 109 AVDYYGRVLARYPRHGWADDCLFRRADVYARRLNE-------TTAARLDLATIIVDYPRS 161 Query: 173 PYVKGARFYVTVGRNQLAAKEVEI 196 R +L + + Sbjct: 162 ----DMRAKADAALKRLGKYQWAV 181 Score = 42.8 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 22/128 (17%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE------ 205 + + + + S ++ N PY A IGR Y + G Sbjct: 59 RSNWQKVEETFSLCLKTAPNGPYAPKAL--------------YYIGRVYEELGAQSGLKS 104 Query: 206 -YVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VALALMDEAREVVSLIQERYPQGYWA 263 + A+ + VLA Y A++ + R + Y L AR ++ I YP+ Sbjct: 105 DFRKAVDYYGRVLARYPRHGWADDCLFRRADVYARRLNETTAARLDLATIIVDYPRSDMR 164 Query: 264 RYVETLVK 271 + +K Sbjct: 165 AKADAALK 172 >gi|157872758|ref|XP_001684907.1| hypothetical protein [Leishmania major strain Friedlin] gi|68127977|emb|CAJ06696.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 847 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 59/226 (26%), Gaps = 41/226 (18%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + ++ +A K N+++A E + PF G + +A Sbjct: 444 KALFNRAFCEDKLMNYTRAIEDYTAALDLDPRNPFTHY------NLGISYDHKGNHARAT 497 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 I + + Q A + + V Sbjct: 498 QAFTRAIELDDRHPD-----------FYHNRGFTQRKQGAYAAAIADYTTAVSLDPKH-- 544 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYS 221 + + ++L E + Y Y RG +A + R + + +++ Sbjct: 545 -FKSHYNRAYCFSKLGRYEEAVADYAAALQIDSNNANAYHNRGAALAQLGRLEAAVEDFN 603 Query: 222 DA----EHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGYW 262 A A+ Y L D+A + I+ W Sbjct: 604 RALRLNPKLTFALNARGLVYDQLQQYDKALADFTEAIRLDQRNSAW 649 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 63/223 (28%), Gaps = 56/223 (25%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQQA 113 Y +A F K + +A + A + +A + G+ + A Sbjct: 549 YNRAYCFSKLGRYEEAVADYAA----------ALQIDSNNANAYHNRGAALAQLGRLEAA 598 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY-TNS 172 + P + + G+ Y Q+ + L + + NS Sbjct: 599 VEDFNRALRLNP---KLTFALNARGLVYDQL--------QQYDKALADFTEAIRLDQRNS 647 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKR-------GEYVAAIPR 212 ++ + E+ I Y Y R G Y AAI Sbjct: 648 AWLHNRG----YTYRNMGKLELAIADYSASIKLAPHSHTAYTNRAFAFRKLGRYEAAIED 703 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQ 254 + L + A + + + L L ++A R+ ++ Sbjct: 704 YTKALREHPGV--ATKVLNNRAYCFARLNLFEDAIRDYTEVLA 744 >gi|85713386|ref|ZP_01044393.1| Uncharacterized conserved protein, contains TPR repeats [Idiomarina baltica OS145] gi|85692792|gb|EAQ30783.1| Uncharacterized conserved protein, contains TPR repeats [Idiomarina baltica OS145] Length = 261 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 53/128 (41%), Gaps = 9/128 (7%) Query: 56 YQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + Y+KA+ L+++ + A F ++FP + + + Y+ +YQ+A Sbjct: 139 SENDAYDKAIALVLEDKRYDAAIPAFESFLQNFPNSTYVPNAHYWLGQLLYAQQEYQKAH 198 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 ++ + YP+S +G+ A+ Q T + +++ Y++S Sbjct: 199 DHFKQVVDNYPDSNKRADCLLKLGVIAAE--------QGKTADAKTFYQQVLTEYSDSTE 250 Query: 175 VKGARFYV 182 A+ + Sbjct: 251 ANLAKQRL 258 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 2/68 (2%) Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 Y AAIP F+ L N+ ++ + A L + A +A + + + YP Sbjct: 155 KRYDAAIPAFESFLQNFPNSTYVPNAHYWLGQLLYAQQEYQKAHDHFKQVVDNYPDSN-- 212 Query: 264 RYVETLVK 271 + + L+K Sbjct: 213 KRADCLLK 220 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 14/104 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + ++ + NS YV A +++ + EY A F+ V Sbjct: 159 AAIPAFESFLQNFPNSTYVPNAHYWLGQLL--------------YAQQEYQKAHDHFKQV 204 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + NY D+ + + +L +A+ + Y Sbjct: 205 VDNYPDSNKRADCLLKLGVIAAEQGKTADAKTFYQQVLTEYSDS 248 >gi|284106837|ref|ZP_06386280.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3] gi|283830016|gb|EFC34292.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3] Length = 351 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 70/236 (29%), Gaps = 39/236 (16%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L SI V + D + ++ + Q F +A + Q Sbjct: 5 LLRIMSIGVLGFTLCLAGPLTSLAADE------AQNLFNQGASHANNQEFQQAAKSLQQA 58 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 FP A L+ + QA + ++ + +P N Y+ +G+ Y Sbjct: 59 LDVFP--RFAAAHHLLGVVSFTGLQQPDQAVTHLKKAVELHP---NFARAYFDLGLVYQH 113 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 Q+ + + +E Y A+ + +QL +E I Sbjct: 114 --------QKNLDAAATVLKKAIEIYPR---FADAQLNLAFAYDQLGDREQAI------- 155 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y AA+ A+ L Y D+A + + + + PQ Sbjct: 156 SAYQAALK----------MDPSQLTALFNLATLYDMQGDTDQAMKELQTLTSQDPQ 201 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 68/195 (34%), Gaps = 47/195 (24%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 R ++ +++ ++N A + +P A + L AF G +QA S Sbjct: 101 ARAYFDLGLVYQHQKNLDAAATVLKKAIEIYP--RFA-DAQLNLAFAYDQLGDREQAISA 157 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + + P L + + D+ Q T ++ + + S + Sbjct: 158 YQAALKMDPSQ--------LTALFNLATLYDM---QGDTDQAMKELQTL-----TSQDPQ 201 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR---L 233 A+ ++ + QLA K + + + Y E+A+ L Sbjct: 202 DAKAWLLLA--QLAEKSLS-----------------EKQAIEAY------EKALGISPDL 236 Query: 234 VEAYVALALMDEARE 248 +EA+ AL + +A++ Sbjct: 237 LEAHYALGYLMQAQD 251 >gi|218781539|ref|YP_002432857.1| branched-chain amino acid ABC transporter periplasmic protein [Desulfatibacillum alkenivorans AK-01] gi|218762923|gb|ACL05389.1| Extracellular ligand-binding receptor [Desulfatibacillum alkenivorans AK-01] Length = 668 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 2/104 (1%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L I +A G + + R +++ KA + ++ A + Q Sbjct: 13 LLIAVLLAATSCGGKKILPGKSTRP--AATQRGDEQLFAKAEKMYAAKQYAYAERLYQQY 70 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 +P + +A + L A + KY++A + + +YP S Sbjct: 71 LTKYPRSALAPAAWLQIAQMAVDNQKYEKARDAYRKILAKYPAS 114 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 22/142 (15%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y+A +Y A L ++Y+T+YP S + I + D + + + Sbjct: 55 YAAKQYAYAERLYQQYLTKYPRSALAPAAW--------LQIAQMAVDNQKYEKARDAYRK 106 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 I+ +Y S V AR I Y K Y A IP + + ++ A+ Sbjct: 107 ILAKYPASAMVTDAR--------------WGILNTYYKEERYEALIPMLRQMASSSKTAQ 152 Query: 225 HAEEAMARLVEAYVALALMDEA 246 A++ L + Y++ ++A Sbjct: 153 ERVRALSLLGDVYMSWGEAEKA 174 >gi|225010576|ref|ZP_03701047.1| Tetratricopeptide TPR_2 repeat protein [Flavobacteria bacterium MS024-3C] gi|225005405|gb|EEG43356.1| Tetratricopeptide TPR_2 repeat protein [Flavobacteria bacterium MS024-3C] Length = 1001 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 50/148 (33%), Gaps = 11/148 (7%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ +A+ N +K S FP K L + + + +A + Sbjct: 574 PYALFNEAMAQGLNGNTAKKIALLVSFSTRFPGHSYLPKVYLELGLSEAAQERNSEAITY 633 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---P 173 + I ++P S + G+ + + L+ + +V R+ S Sbjct: 634 FDLLIKEFPNSDLLPQAMLRKGLLQFNLSQ--------ADASLKTLQDLVNRFPKSASFS 685 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYL 201 A + + + +L+ +G++ L Sbjct: 686 QAVSAAKRIYIDQGRLSDYRKWVGQFNL 713 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 73/206 (35%), Gaps = 32/206 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR------KSLLMSAFVQYSAGKYQQAA 114 Y+K F K + F+K+ F Q + ++ L A YS+G++ +A Sbjct: 502 YQKGYAFFKTKEFTKSITAFKQFISQ--TQSMTELETERNQAALRIADAYYSSGQFSKAI 559 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 S + P+ V Y + M+ T + + R+ Y Sbjct: 560 SSYVSVAREQPQ--AVPYALFNEAMAQGLN--------GNTAKKIALLVSFSTRFPGHSY 609 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 + Y+ +G ++ A AI F L++ + +++ +AM R Sbjct: 610 LPKV--YLELGLSEAAQ------------ERNSEAITYFDLLIKEFPNSDLLPQAMLRKG 655 Query: 235 EAYVALALMDEAREVVSLIQERYPQG 260 L+ D + + + + R+P+ Sbjct: 656 LLQFNLSQADASLKTLQDLVNRFPKS 681 >gi|171911019|ref|ZP_02926489.1| TPR repeat [Verrucomicrobium spinosum DSM 4136] Length = 844 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 34/96 (35%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 +D ++Y+ A L +Q++ A + + +P ++ Y Sbjct: 67 VDPGRVPGPDEDLYDYATLTYNQQDYKLAIKPYTDYVTTYPLGRHGAEAWFRLGECYYKT 126 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + A E +T++P + + Y +GM Sbjct: 127 KQNDDAKRCYNEVLTRFPRTDSAGLAAYRMGMFSYN 162 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 54/155 (34%), Gaps = 22/155 (14%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 F + AGKY A + +I ++P+ N+ G++ + I L Sbjct: 458 GFAEAEAGKYTDAVNTLTMFIQEFPKDANLPVALAQRGIA-FKGIPSFD-------KALA 509 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 + I++ + P ++ A + +++L I + + ++ + Sbjct: 510 DFTVIIKDFRGHPALEMAYYQSGDIKSRLRDLPGMIADF--------------ETLVKTF 555 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 A E R+ Y L + + + +++ Sbjct: 556 PATPAAAECWYRIGRGYFDLKTREGYGKALEPLRK 590 Score = 39.7 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 60/198 (30%), Gaps = 36/198 (18%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-- 104 + V + +Y+K + ++ A ++FP + + L A Q Sbjct: 441 DVSKVPNKVRATVIYKKGFAEAEAGKYTDAVNTLTMFIQEFP-----KDANLPVALAQRG 495 Query: 105 --YSA-GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + + +A + I + ++ YY G I+ D + Sbjct: 496 IAFKGIPSFDKALADFTVIIKDFRGHPALEMAYYQSG-----DIKSRLRDLPGM---IAD 547 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK---RGEYVAAIPRFQLVLA 218 +V+ + +P + IGR Y R Y A+ + + Sbjct: 548 FETLVKTFPATPAAAECWYR--------------IGRGYFDLKTREGYGKALEPLRKAIE 593 Query: 219 NYSDAEHAEEAMARLVEA 236 ++ +EA L+ Sbjct: 594 LDPK-KYLDEASQLLISC 610 Score = 38.9 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 31/78 (39%), Gaps = 8/78 (10%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y+ Y+ A +Y+T YP ++ ++ +G Y + ++ + + Sbjct: 87 YNQQDYKLAIKPYTDYVTTYPLGRHGAEAWFRLGECYYKTKQNDD--------AKRCYNE 138 Query: 165 IVERYTNSPYVKGARFYV 182 ++ R+ + A + + Sbjct: 139 VLTRFPRTDSAGLAAYRM 156 Score = 35.9 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 65/200 (32%), Gaps = 16/200 (8%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYI 121 + K NF A +Y P + ++ + G Y + + Y+ Sbjct: 645 GERYFKRDNFKAAAKYL--VKATTPDNPSGTQGIVWNYLGMAELENGNYDASIRALDFYL 702 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 Q PE + G ++ D+ ++ + + E A+ Sbjct: 703 AQTPEGASRAKALLTKG---HALLGKKSLDEADA-CAIEGLQIMKEG------RLHAQLQ 752 Query: 182 VTVGRNQLAAKEVEI--GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + G +A EV G + + A + +V + D E EA + +A Sbjct: 753 LLQGDVFMARGEVAAPTGDLDGAKAAWQKAAGNYVVVSQVFVDPEITPEAAHKAADALDK 812 Query: 240 LALMDEAREVVSLIQERYPQ 259 L D+A + I+ +YP Sbjct: 813 LGQKDKANSLREQIKTKYPN 832 Score = 35.9 bits (82), Expect = 6.7, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 25/61 (40%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + +Y AI + + Y H EA RL E Y D+A+ + + R+P+ Sbjct: 87 YNQQDYKLAIKPYTDYVTTYPLGRHGAEAWFRLGECYYKTKQNDDAKRCYNEVLTRFPRT 146 Query: 261 Y 261 Sbjct: 147 D 147 >gi|24954813|gb|AAN64317.1| type 5 serine/threonine phosphatase 55 kDa isoform [Solanum lycopersicum] gi|28141084|gb|AAO26214.1| type 5 protein serine/threonine phosphatase 55 kDa isoform [Solanum lycopersicum] Length = 485 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 40/137 (29%), Gaps = 23/137 (16%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 ++ E+ + A K +S+A + + + A AF +Y Sbjct: 9 SNASRAEELKQLANEAFKGHKYSQAIDLYTQAIELNGENAVY----YANRAFAHTKLEEY 64 Query: 111 QQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 A G I P Y YY G +Y M K L+ ++ + Sbjct: 65 GSAIQDGTRAIEIDPR-----YSKGYYRRGAAYLAM--------GKFKDALKDFQQVKKL 111 Query: 169 YTNSPYVKGARFYVTVG 185 N P A + Sbjct: 112 CPNDP---DATKKLKEC 125 >gi|322705751|gb|EFY97335.1| serine/threonine-protein phosphatase 5 [Metarhizium anisopliae ARSEF 23] Length = 475 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 16/130 (12%), Positives = 38/130 (29%), Gaps = 23/130 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 K ++ A +++++ + P ++ Y A + Sbjct: 10 NKGNKSFASGDYPAAVDFYSKAIGLNDKEP-TFFTNRAQ-----AYIKTEAYGYAIADAG 63 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + P K + YY G++ ++R K + V N+ A Sbjct: 64 KALELNP--KLIK-AYYRRGLARTAILR--------PKEAIDDFKECVRLDPNNK---DA 109 Query: 179 RFYVTVGRNQ 188 R + + Sbjct: 110 RLKLEECKKI 119 >gi|167623624|ref|YP_001673918.1| Tol-Pal system YbgF [Shewanella halifaxensis HAW-EB4] gi|167353646|gb|ABZ76259.1| Tol-Pal system YbgF [Shewanella halifaxensis HAW-EB4] Length = 241 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 43/127 (33%), Gaps = 14/127 (11%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + + ++ + + + ++ +E Y NS Y A +++ Sbjct: 122 ASYEQAVNLVLKDKKYEAAIPAFAQFIESYPNSSYAPNANYWLGQLL------------- 168 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + E+V A F V+ Y D+ E++ +L +A+ + + Y Sbjct: 169 -YNKSEFVGASKAFTTVVEKYKDSGKRGESLVKLGMIAEKTGDKAKAKAYYLKVTQEYAN 227 Query: 260 GYWARYV 266 AR Sbjct: 228 SAAARIA 234 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 42/128 (32%), Gaps = 22/128 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 KY+ A ++I YP S Y +G V + + + Sbjct: 133 KDKKYEAAIPAFAQFIESYPNSSYAPNANYWLGQLLYNKSEFVG--------ASKAFTTV 184 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 VE+Y +S + + + + K YYLK V Y+++ Sbjct: 185 VEKYKDSGKRGESLVKLGMIAEKTGDKAKAKA-YYLK-------------VTQEYANSAA 230 Query: 226 AEEAMARL 233 A A+ +L Sbjct: 231 ARIALQQL 238 >gi|262066201|ref|ZP_06025813.1| tetratricopeptide repeat family protein [Fusobacterium periodonticum ATCC 33693] gi|291380108|gb|EFE87626.1| tetratricopeptide repeat family protein [Fusobacterium periodonticum ATCC 33693] Length = 936 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 71/186 (38%), Gaps = 16/186 (8%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + YQR ++ FL + N A + + + + +++++ V Y+ +Y Sbjct: 123 EKTYQRTLFAVGQDFLSKDNNEAARDIYKEIIDKKY---ENDKEAMMGLGIVNYNLKEYD 179 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 +A E+ P+ +N D V YL + + T+ + + Sbjct: 180 KAIYWFSEFQRTKPK-ENKDMVSYLKASALYRK--------GNTEQAIVDFESLANTNPA 230 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN-YSDAEHAEEAM 230 + Y K A Y+ + K+ + +YL++ + ++ + Y E+ ++A+ Sbjct: 231 NDYSKKAVLYLIEIYSN--KKDEQKVNFYLEKIKGTKEYNTAMTMIGDLYVTKENYDKAL 288 Query: 231 ARLVEA 236 ++ Sbjct: 289 EYYNQS 294 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 73/212 (34%), Gaps = 29/212 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K + + + + +A +F + + ++ K L + A KY +A GE+Y Sbjct: 508 YLKGIAAMGLKKYDEAETHFQNVLSNGDQS-LSTKVYLNRVRNFFLAEKYNEAIQAGEQY 566 Query: 121 I-TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P+ + Y L +G+SY ++ + YDQ S Y K Sbjct: 567 LSKINPDKEKAIYSEMLDKIGLSYFRVGK---YDQAR-----------------SYYSKI 606 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A + +I Y Y A +++ + NY + + E+A + + Sbjct: 607 ASMKGYEVYGK-----FQIADSYYNEKNYATAGEQYKSIYQNYGETFYGEQAYYKYITTL 661 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETL 269 L + + YP + L Sbjct: 662 SLLGNTEAFEREKNNFLSVYPNSNLRTTLSNL 693 >gi|225677215|ref|ZP_03788208.1| TPR domain protein [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590739|gb|EEH11973.1| TPR domain protein [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 291 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +KA + + A NQ FP+ + +L+ + Y+ +Y++A + + Sbjct: 99 KKAKDSFESGDNEAAISLLNQIIAKFPYH---KNALIGLGNIYYANKEYKKAVEIYTRLL 155 Query: 122 TQYPESKNV 130 ++P + + Sbjct: 156 KEHPSNPYI 164 >gi|148262449|ref|YP_001229155.1| chromosome segregation ATPase-like protein [Geobacter uraniireducens Rf4] gi|146395949|gb|ABQ24582.1| Chromosome segregation ATPase-like protein [Geobacter uraniireducens Rf4] Length = 1030 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 40/102 (39%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 FF AVC + + + +++ ++++F A + + + Sbjct: 6 FFRAAVCKTLLGILIILSLLPNPAFCLDSEDSQIFIAGFNSYQKRDFQTAVDKMSALLKK 65 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 +P + ++ A Y AG Q+AA ++ +YP+S Sbjct: 66 YPDTPLRDMAIFWLARANYKAGHRQEAARYMAQFFKEYPDSP 107 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 3/70 (4%) Query: 194 VEIGRY--YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 + I + Y KR + A+ + +L Y D + A+ L A EA ++ Sbjct: 39 IFIAGFNSYQKRD-FQTAVDKMSALLKKYPDTPLRDMAIFWLARANYKAGHRQEAARYMA 97 Query: 252 LIQERYPQGY 261 + YP Sbjct: 98 QFFKEYPDSP 107 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 9/102 (8%) Query: 93 ARKSLLMSA-FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 + S + A F Y +Q A + +YP++ D + + + + Sbjct: 34 SEDSQIFIAGFNSYQKRDFQTAVDKMSALLKKYPDTPLRDMAIFWLARANYKA------- 86 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + +YM++ + Y +SP + + A E Sbjct: 87 -GHRQEAARYMAQFFKEYPDSPLKATVEDELVTLAAKYAKGE 127 >gi|242087211|ref|XP_002439438.1| hypothetical protein SORBIDRAFT_09g006380 [Sorghum bicolor] gi|241944723|gb|EES17868.1| hypothetical protein SORBIDRAFT_09g006380 [Sorghum bicolor] Length = 482 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 43/141 (30%), Gaps = 29/141 (20%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARKSLLMSAFVQYS 106 TD++ E KA K FS+A E + + + A ++ F Sbjct: 5 ATDLQRAEEFKLKANDAFKANKFSQAIELYSQAIELNSSNAVY--WANRA-----FAHTK 57 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 +Y A + I P Y YY G +Y M K L+ + Sbjct: 58 LEEYGSAVQDATKAIEIDPR-----YSKGYYRRGAAYLAM--------GKFKEALKDFQQ 104 Query: 165 IVERYTNSPYVKGARFYVTVG 185 + + N P A + Sbjct: 105 VKKICPNDP---DATRKLKEC 122 >gi|224372862|ref|YP_002607234.1| putative lipoprotein [Nautilia profundicola AmH] gi|223589910|gb|ACM93646.1| putative lipoprotein [Nautilia profundicola AmH] Length = 208 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 58/161 (36%), Gaps = 12/161 (7%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 F +G + + + +++T + + ++Y+ ++ N +A E F + P + Sbjct: 13 FFIGCSSK-NEVTHSENLTALSWHYKIYKD----IQNTNLDQADEDFISLEAEHPASIYI 67 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 + LL +Y A EY +Y + + ++ Y + +Q+ Sbjct: 68 KTDLLNLFLAHQQLKEYDLALFYLNEYEKRYASVQEIPWIEYQKIKMNYLKYSNPYTNQQ 127 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 ++ +++Y NS + LA E+ Sbjct: 128 MLLNLITMCDNYLKKYPNSNFSPEVST-------ILAKAEL 161 >gi|88604026|ref|YP_504204.1| TPR repeat-containing protein [Methanospirillum hungatei JF-1] gi|88189488|gb|ABD42485.1| TPR repeat [Methanospirillum hungatei JF-1] Length = 243 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 54/152 (35%), Gaps = 31/152 (20%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 Y F + ++ + +++ E+ K + + ++ +A + Sbjct: 14 YSFLFLVVLTVTLGGTSLCVAETT--------------AELTTKGIALYDDGHYDEALDL 59 Query: 80 FNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 F Q DF +A Y +Y++A ++ + PE DY +Y Sbjct: 60 FEQVLETESDFAYAWY------NKGNALYHLKEYKEAIEAYKKALEIDPEYSYADYAWYN 113 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +G SY ++ + T+ ++ + ++ Sbjct: 114 IGNSYLEL--------KETEKAIEAYEKAIDY 137 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 40/130 (30%), Gaps = 19/130 (14%) Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y G Y +A L E+ + + Y +Y G + + + K ++ Sbjct: 46 ALYDDGHYDEALDLFEQVLE---TESDFAYAWYNKGNALYHL--------KEYKEAIEAY 94 Query: 163 SRIVERYTNSPYVKGA-------RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + +E Y A + + A E I Y E++ AI Sbjct: 95 KKALEIDPEYSYADYAWYNIGNSYLELKETEKAIEAYEKAI-DYLYSTEEWIKAIEIADK 153 Query: 216 VLANYSDAEH 225 V+ E+ Sbjct: 154 VIEFAPTKEY 163 >gi|31789446|gb|AAP58560.1| hypothetical protein [uncultured Acidobacteria bacterium] Length = 157 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 21/106 (19%) Query: 184 VGRNQLAA----KEVEIGRYYLK-RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + R+ L + + R+Y K + YVAAI R + + A +E + E+ + Sbjct: 36 LVRDALLEEDSLHNLTVARHYFKLKKAYVAAIKRCEEIDAGNPTFSKMDEVLFIAGESSL 95 Query: 239 ALA----------------LMDEAREVVSLIQERYPQGYWARYVET 268 LA L+ +AR ++ + YP + + +T Sbjct: 96 RLAENKGKQKAPKDKTPEQLLQDARVYLTRLVNGYPNSSFFKQAQT 141 Score = 35.5 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 9/97 (9%) Query: 98 LMSAFVQYSAGK-YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI-----RDVPYD 151 L A + K Y A EE P +D V ++ G S ++ + P D Sbjct: 50 LTVARHYFKLKKAYVAAIKRCEEIDAGNPTFSKMDEVLFIAGESSLRLAENKGKQKAPKD 109 Query: 152 QRA---TKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + + Y++R+V Y NS + K A+ + Sbjct: 110 KTPEQLLQDARVYLTRLVNGYPNSSFFKQAQTDLAAL 146 >gi|37521471|ref|NP_924848.1| hypothetical protein glr1902 [Gloeobacter violaceus PCC 7421] gi|35212468|dbj|BAC89843.1| glr1902 [Gloeobacter violaceus PCC 7421] Length = 326 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 76/219 (34%), Gaps = 32/219 (14%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + + + ++LK + F +A + F + R P + ++ L Y+ Sbjct: 45 EEPSSLQALMLTGSVYLKTKRFDEALDAFQKALRVDPLSP---QACLGIGMAHLRKKDYK 101 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 QA E + P+S Y +GMS Q L +QY ++ + Sbjct: 102 QATVAFESALKLDPKSAK---AYITLGMS--------ALGQEHYDLAIQYFNKALRFDPQ 150 Query: 172 SPYVKG----ARFYVTVGRNQLAAKE-------------VEIGRYYLKRGEYVAAIPRFQ 214 + + A + + ++ E + + +YL+ +Y +A Q Sbjct: 151 AEMARILISRAYKKLGKPGDAVSTLETAVKLNPKSGMANMSLASFYLQNKDYTSAEAALQ 210 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 VL D M L + YV +EA +++ + Sbjct: 211 RVLEARGDKPA-PTIMLSLADLYVQTDRTEEAGDILRAL 248 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 67/197 (34%), Gaps = 34/197 (17%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A +E+ + +A E + P + ++L+++ V ++ +A ++ + Sbjct: 23 AGTLFREKRYDEALEEATAILEEEPSS---LQALMLTGSVYLKTKRFDEALDAFQKALRV 79 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 P S +GM++ + + K ++ S A+ Y+T Sbjct: 80 DPLSPQ---ACLGIGMAHLRK--------KDYKQATVAFESALKLDPKS-----AKAYIT 123 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 +G + L + ++ Y + RF AE A + AY L Sbjct: 124 LGMSALGQEHYDLAIQYFNK------ALRFD---------PQAEMARILISRAYKKLGKP 168 Query: 244 DEAREVVSLIQERYPQG 260 +A + + P+ Sbjct: 169 GDAVSTLETAVKLNPKS 185 Score = 39.3 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 47/138 (34%), Gaps = 22/138 (15%) Query: 32 VCFLVGWERQSSRDVYLDSVT-------DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 C +G +D +V D + + + L ++++ A +YFN+ Sbjct: 86 ACLGIGMAHLRKKDYKQATVAFESALKLDPKSAKAYITLGMSALGQEHYDLAIQYFNKAL 145 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 R F A + ++ + GK A S E + P+S GM+ + Sbjct: 146 R---FDPQAEMARILISRAYKKLGKPGDAVSTLETAVKLNPKS----------GMANMSL 192 Query: 145 IRDV--PYDQRATKLMLQ 160 D + + LQ Sbjct: 193 ASFYLQNKDYTSAEAALQ 210 >gi|193659732|ref|XP_001943461.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Acyrthosiphon pisum] Length = 1185 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 103/276 (37%), Gaps = 37/276 (13%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 + L + + EA A+T +++A F + Q + +Y D + + + Sbjct: 473 LEESLSLSKKMVEADPQHYNSIAVTTTYNLARIFEAQCQFQKAETLYKDILKEHPNYIDC 532 Query: 61 YEK-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 Y + + +A ++F + + P + L A +++ G+ Sbjct: 533 YLRLGCMARDRNQIYEASDWFKEALRIDNEHP-DAWSLLGNLHLAKMEWGPGQ------- 584 Query: 117 GEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPY--DQ--RATKLMLQYMSRIVERYT 170 +++ P + N Y +G + Q + DQ R L LQ+ +++++ Sbjct: 585 -KKFERVLKNPSTLNDSYSLIALGNVWLQTLHQPTRNKDQEKRHQDLALQFFTKVLKNDP 643 Query: 171 NSPYVKG------ARFY-VTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRF 213 + + A + + R+ A +E + I Y+++ +Y++AI + Sbjct: 644 RNIWAANGIGCVMAHKHCINEARDIFAQVREATADFCDVWLNIAHIYIEQKQYISAIQMY 703 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 + + + + E + L AY + EA+ V Sbjct: 704 ENCMKKFFKHDSV-EVLQYLGRAYFRAGKLKEAKTV 738 >gi|126661330|ref|ZP_01732397.1| TPR repeat [Cyanothece sp. CCY0110] gi|126617383|gb|EAZ88185.1| TPR repeat [Cyanothece sp. CCY0110] Length = 306 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 83/272 (30%), Gaps = 70/272 (25%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + F +AV F +G+ +S + + + + V +L +QN+ +A Sbjct: 5 VKNFFNFFVLIVAVLFCLGFSSPNSENESISPN---------FSQGVYYLTQQNYQEAIL 55 Query: 79 YFNQCSRDFPF---AGVA-------------------RKSL----------LMSAFVQYS 106 F Q + + + ++L L Y Sbjct: 56 KFTQVINNKNQKIASAYSNRCLAYLQINNNQAAKRDCEQALEMNSNNIEAYLNKGLADYQ 115 Query: 107 AGKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y Q+ + +E I KN DY YY G+ Y ++ + L+ + Sbjct: 116 LENYTQSLAAYQEVIK---RHKN-DYRAYYNQGLVYFKL--------ENYQQALENYQQA 163 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 +E + LA YLK + AI F VL + Sbjct: 164 LETNQDHSLKDKT---FIYYDRALA---------YLKLENFTQAIANFTHVLILNPN--- 208 Query: 226 AEEAMARLVEAYVALALMDEA-REVVSLIQER 256 E+A R AY L A ++ +I Sbjct: 209 NEQAYYRRGYAYQKLGNYQAAFKDFTEVIALN 240 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 65/207 (31%), Gaps = 47/207 (22%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 K + + +N++++ + + + ++ V + YQQA ++ + Sbjct: 108 NKGLADYQLENYTQSLAAYQEVIKRHK-NDY--RAYYNQGLVYFKLENYQQALENYQQAL 164 Query: 122 TQYPESKNVD--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + D ++YY ++Y ++ + + ++ N+ A Sbjct: 165 ETNQDHSLKDKTFIYYDRALAYLKL--------ENFTQAIANFTHVLILNPNNE---QAY 213 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + Y K G Y AA F V+A L AY+ Sbjct: 214 YRRGYA--------------YQKLGNYQAAFKDFTEVIALNPQ----------LTGAYIN 249 Query: 240 -------LALMDEAREVVSLIQERYPQ 259 L L D A + + ++ Q Sbjct: 250 RGIVAGILGLQDIAWQNFKIALHQFQQ 276 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 3/67 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y++A+ +LK +NF++A F P ++ + G YQ A E Sbjct: 179 YYDRALAYLKLENFTQAIANFTHVLILNPNN---EQAYYRRGYAYQKLGNYQAAFKDFTE 235 Query: 120 YITQYPE 126 I P+ Sbjct: 236 VIALNPQ 242 >gi|326433157|gb|EGD78727.1| serine/threonine-protein phosphatase 5 [Salpingoeca sp. ATCC 50818] Length = 478 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 19/147 (12%), Positives = 41/147 (27%), Gaps = 19/147 (12%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQ 112 E K K++ F +A E++ P ++ F + Sbjct: 3 TPAEEAKAKGNECFKKKQFHEAIEHYTAAIELDPSVPAYYTNRA-----FAYIKTEGFGA 57 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A + + + P+ YY + + K + +++ N Sbjct: 58 ALEDADSALRRNPKFVK---AYYRRATANMGL--------GKWKASKRDFEAVLKVRPND 106 Query: 173 PYVKGARFYVTVGRNQLA-AKEVEIGR 198 + V +LA K + +G Sbjct: 107 KDAQKKFKEVDKIVRRLAFEKAITVGE 133 >gi|291277600|ref|YP_003517372.1| putative paralysed flagellum protein PflA [Helicobacter mustelae 12198] gi|290964794|emb|CBG40650.1| putative paralysed flagellum protein, PflA [Helicobacter mustelae 12198] Length = 774 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 49/151 (32%), Gaps = 11/151 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K + Q++ A + +P A+ L Y +Y A + Sbjct: 179 YLKVKDLVDSQSYRAALNNIANAFKKYPKTLFAKDFLFFQIKALYHLKRYDSAIDYANAW 238 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + Y +V + YLV SYA++ R Y RI++ Y + + A Sbjct: 239 LKNYSSDTSVPEMLYLVANSYARL--------RFPSESNYYYRRIIDEYPGNRFA--ALS 288 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + V + R Y Y A Sbjct: 289 KIKIANMFAGGSNVGLARLYYS-QAYQEAKN 318 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 24/142 (16%) Query: 124 YPESKN--VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P + N DY YL ++D+ D ++ + L ++ ++Y + + K F Sbjct: 166 NPMNTNLGADYAEYLK-------VKDLV-DSQSYRAALNNIANAFKKYPKTLFAKD--FL 215 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 + Y+LKR Y +AI L NYS E + + +Y L Sbjct: 216 FFQIK----------ALYHLKR--YDSAIDYANAWLKNYSSDTSVPEMLYLVANSYARLR 263 Query: 242 LMDEAREVVSLIQERYPQGYWA 263 E+ I + YP +A Sbjct: 264 FPSESNYYYRRIIDEYPGNRFA 285 >gi|254495292|ref|ZP_05108216.1| conserved hypothetical protein [Polaribacter sp. MED152] gi|85819646|gb|EAQ40803.1| conserved hypothetical protein [Polaribacter sp. MED152] Length = 1011 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 68/209 (32%), Gaps = 39/209 (18%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCS--------RDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 Y +A + +N+ +A F + +DFP A+ + Y++ Sbjct: 469 YWEAETLYRLENYEEALSKFIALNNSLRSANNKDFPLLEY------NIAYCHFKLKDYEK 522 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 AA ++ S I D +L Y + + Y Sbjct: 523 AALTFNQF-------------------SGKGNIDQNIKDDSFLRLGDSYFA--IRNY--- 558 Query: 173 PYVKGARFYVTVGRNQLAAKEVE-IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 A + A + G Y + + A + V+ NY + ++A+ Sbjct: 559 EKAIRAYKVIVDNSGLDADYAMYQTGMSYGFQNKNEAKVNALTKVINNYQISSLKDDALF 618 Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQG 260 +L Y L ++A + + +QE++ + Sbjct: 619 QLAATYTKLKDFEKAHQAYTRLQEKHVKS 647 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 15/122 (12%), Positives = 41/122 (33%), Gaps = 10/122 (8%) Query: 60 VYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +Y+ + + + +N +K + ++ + + +L A +++A Sbjct: 580 MYQTGMSYGFQNKNEAK-VNALTKVINNYQISSLKDDALFQLAATYTKLKDFEKAHQAYT 638 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 ++ +S + G+ Y ++ L L ++ + Y NS A Sbjct: 639 RLQEKHVKSVFIPTALVREGLLYYNQNKNS--------LALNNFKKVAQTYPNSSEALEA 690 Query: 179 RF 180 Sbjct: 691 VK 692 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 63/169 (37%), Gaps = 27/169 (15%) Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 ++ KY++A + Y + + N DY Y +G +Y + Q + + Y Sbjct: 257 SYFNLNKYEEAIPYLKGYKGKNGKWNNTDY--YQLGYAYFK--------QNDFENAISYF 306 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-NYS 221 ++I+++ + + A +++ YL + A+ F+ +Y+ Sbjct: 307 NKIIDQ--ENAVAQNAYYHLAEC--------------YLNIDKKNEALNAFKTASEMSYN 350 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + + A+ +Y + +V+ + YP + + L+ Sbjct: 351 SSIKEDAALNYAKLSYEEGNPFENVSDVLQNYLKTYPNSTSYKEINELI 399 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 23/188 (12%), Positives = 46/188 (24%), Gaps = 25/188 (13%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + + +A Y + + ++ A S + I Q Sbjct: 255 GESYFNLNKYEEAIPYLKGYKGKN--GKWNNTDYYQLGYAYFKQNDFENAISYFNKIIDQ 312 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 E+ YY + Y + + L E NS + A Sbjct: 313 --ENAVAQNAYYHLAECYLNIDKK--------NEALNAFKTASEMSYNSSIKEDAALNYA 362 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 Y + + Q L Y ++ +E +V +++ Sbjct: 363 KLS-------------YEEGNPFENVSDVLQNYLKTYPNSTSYKEINELIVSSFIHENDY 409 Query: 244 DEAREVVS 251 A E + Sbjct: 410 QGALEYLK 417 >gi|90022172|ref|YP_527999.1| hypothetical protein Sde_2527 [Saccharophagus degradans 2-40] gi|89951772|gb|ABD81787.1| Tetratricopeptide TPR_2 [Saccharophagus degradans 2-40] Length = 255 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 8/109 (7%) Query: 56 YQREV--YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 ++E+ Y+ A+ L++Q++ A Q ++P A + + + +Q Sbjct: 130 PEQELQEYKDAIDLVLRKQDYKNAVIALKQHLDNYPKGRYAANAQYWLGELYLKDNELEQ 189 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + + ++P V Y +G Y D+ D+ K MLQ Sbjct: 190 SRQWFSRLLGEFPNHTKVPDAKYKLGRVY-----DMMGDKATAKKMLQE 233 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 15/111 (13%) Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 Y I V Q K + + + ++ Y Y A++++ L E+E R + Sbjct: 137 YKDAIDLVLRKQ-DYKNAVIALKQHLDNYPKGRYAANAQYWLGELY--LKDNELEQSRQW 193 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 R +L + + +A +L Y + A++++ Sbjct: 194 FSR------------LLGEFPNHTKVPDAKYKLGRVYDMMGDKATAKKMLQ 232 >gi|297537632|ref|YP_003673401.1| hypothetical protein M301_0440 [Methylotenera sp. 301] gi|297256979|gb|ADI28824.1| hypothetical protein M301_0440 [Methylotenera sp. 301] Length = 755 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 34/86 (39%), Gaps = 1/86 (1%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 ++D Y ++ +A + ++ KA + N P ++ + + A + Sbjct: 165 AKPADMSDNDYAAKLMAEARVARGFGDYPKAVQLLNAVLAL-PSNTHSQDAQELIANSRE 223 Query: 106 SAGKYQQAASLGEEYITQYPESKNVD 131 G+ +A + E Y+ YP+ + Sbjct: 224 KMGEMTKAKAEYETYLKLYPQGEGAA 249 >gi|15966490|ref|NP_386843.1| hypothetical protein SMc02941 [Sinorhizobium meliloti 1021] gi|15075761|emb|CAC47316.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021] Length = 345 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 46/155 (29%), Gaps = 17/155 (10%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRY---QREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 G + DS ++Y+ + ++S A + F F Sbjct: 192 TGLATQGGGLNDNPGSVPDSGQATASLSDPGDLYQAGYSHVLSGDYSIAEQEFRDYLDAF 251 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES---KNVDYVYYLVGMSYAQM 144 P A + QYS GKY A + ++ + + +GMS + Sbjct: 252 PSGDKAADASFWMGEAQYSQGKYSDA---AKTFLNAHQSHGKSPKAPEMLLKLGMSLGAL 308 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + + + +RY+ + A+ Sbjct: 309 DNK--------ETACATLREVNKRYSKASPAVKAK 335 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 34/100 (34%), Gaps = 14/100 (14%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 Q ++ + + A F++ + +G+Y A F Sbjct: 240 AEQEFRDYLDAFPSGDKAADASFWMGEAQ--------------YSQGKYSDAAKTFLNAH 285 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 ++ + A E + +L + AL + A + + +RY Sbjct: 286 QSHGKSPKAPEMLLKLGMSLGALDNKETACATLREVNKRY 325 >gi|169597993|ref|XP_001792420.1| hypothetical protein SNOG_01794 [Phaeosphaeria nodorum SN15] gi|111070323|gb|EAT91443.1| hypothetical protein SNOG_01794 [Phaeosphaeria nodorum SN15] Length = 474 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 55/191 (28%), Gaps = 47/191 (24%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + K K Q++ A +++ + P + ++ Y Sbjct: 6 EEATALKNKGNDAFKNQDWPAALDFYTKAIELWDKEP-SFYTNRAQ-----ANIKLESYG 59 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + ++ I P + YY + M++ + L+ ++++ N Sbjct: 60 YAVADADKAIELDPNNVK---AYYRRASANTSMLKH--------REALRDWKLVIKKAPN 108 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 A+ + + KR ++ AI + DA A E + Sbjct: 109 D---ANAKLRMHECEKII------------KRDAFLKAIE-----VE---DAPSAAEGLD 145 Query: 232 R----LVEAYV 238 L Y Sbjct: 146 IEHMALERNYD 156 >gi|302608154|emb|CBW44426.1| conserved hypothetical protein, putative exported protein [Marinobacter hydrocarbonoclasticus] Length = 258 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 44/129 (34%), Gaps = 22/129 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 Y A + E++ YPE YY +G Y + + Q + + Sbjct: 150 KDYDTAITRLYEFVDTYPEGDLTVNAYYWLGEVYLAKPQ--------LEQARQAFTIVAT 201 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 RY++ A + + V ++L K+ A R V+ Y D+ AE Sbjct: 202 RYSDHRKAPDAVYKLGVTLDRLGEKD--------------EARRRMTSVVEQYPDSGAAE 247 Query: 228 EAMARLVEA 236 A L A Sbjct: 248 LAKKYLDSA 256 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 17/136 (12%), Positives = 51/136 (37%), Gaps = 9/136 (6%) Query: 52 TDVRYQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + +++ Y + + ++++ A + +P + + V + + Sbjct: 130 SPEPEEQKTYNDIIDLIRNKKDYDTAITRLYEFVDTYPEGDLTVNAYYWLGEVYLAKPQL 189 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +QA T+Y + + Y +G++ ++ + M+ +VE+Y Sbjct: 190 EQARQAFTIVATRYSDHRKAPDAVYKLGVTLDRL--------GEKDEARRRMTSVVEQYP 241 Query: 171 NSPYVKGARFYVTVGR 186 +S + A+ Y+ + Sbjct: 242 DSGAAELAKKYLDSAQ 257 Score = 42.4 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 14/119 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 I D+ +++ + + V+ Y A +++ G YL Sbjct: 139 YNDIIDLIRNKKDYDTAITRLYEFVDTYPEGDLTVNAYYWL--------------GEVYL 184 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + A F +V YSD A +A+ +L L DEAR ++ + E+YP Sbjct: 185 AKPQLEQARQAFTIVATRYSDHRKAPDAVYKLGVTLDRLGEKDEARRRMTSVVEQYPDS 243 >gi|159899595|ref|YP_001545842.1| lytic transglycosylase catalytic [Herpetosiphon aurantiacus ATCC 23779] gi|159892634|gb|ABX05714.1| Lytic transglycosylase catalytic [Herpetosiphon aurantiacus ATCC 23779] Length = 777 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 74/244 (30%), Gaps = 40/244 (16%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 ++ V L R V + T + ++ ++A + A + Q + Sbjct: 18 VALIVLLLASCSRDV---VGQPTATPLPSPAQLLQQAEQHQQADQVDLALSDYQQVLLQY 74 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 P A AR + A+ + + A S +I ++ ++L + + + Sbjct: 75 PDAPEARVAKFGVAYSAFLRQDWAAAWSQLTSFI-----NEQTHDQWHLRALFLLGRVAE 129 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 + D Q + S Y R NQ E I Y Sbjct: 130 IQGDHAIAIEAYQQYEDLKGLL--SGYAAQRRAAQLQATNQ---TEQAIAAY-------- 176 Query: 208 AAIPRF-----------QLVLANYSDAEHAEEAMARLVE--------AYVALALMDEARE 248 AA R+ L Y AE+A+ +L ++ + L+D AR Sbjct: 177 AASGRYDMAGPQRVASLNKALEFYDQTGQAEQALTQLEVILSFARTPSFRSTTLLDAARR 236 Query: 249 VVSL 252 L Sbjct: 237 AQRL 240 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 60/218 (27%), Gaps = 32/218 (14%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 S + +D + + V A + + A F+Q + A + A Sbjct: 261 SEAPIAIDELAALGESTPVLAAAGIAYNHGQYLDAISLFDQVLANGLSGEEAAEIERKRA 320 Query: 102 FVQYSAGKYQQAASL----GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 Y A + E + P A + D+ ++L Sbjct: 321 LALRQLDDYAGAQAAFNSIAERFAEL-PIG--------RQARLDAIQTQGQAGDREGSRL 371 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + ERY + P A V + G+ A Q++L Sbjct: 372 AYLDFA---ERYADDPLAPEALRRVVEITSW--------------SGDPAATAN-AQIML 413 Query: 218 -ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 Y + ++A+ +++A V L+ Sbjct: 414 GQRYPWSHEGQQALHAAGRYAWDTGQVEQAAAVWQLLG 451 >gi|154247010|ref|YP_001417968.1| Tol-Pal system YbgF [Xanthobacter autotrophicus Py2] gi|154161095|gb|ABS68311.1| Tol-Pal system YbgF [Xanthobacter autotrophicus Py2] Length = 307 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 42/116 (36%), Gaps = 8/116 (6%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 RE+Y+ L+ Q+++ A + F Q + + + M + Y AA+ Sbjct: 184 RELYDAGQAQLQRQDYAGAEQTFRQIIQSASGDRIIPDATFMLGESLFLRQNYGDAAASF 243 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 E T+YP S +G S A + + + + +Y +P Sbjct: 244 LEVSTKYPNSTRAPEALLRLGQSLAGL--------GEKETACATLQEVDRKYPRAP 291 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 24/56 (42%) Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 R Y A F V Y ++ A EA+ RL ++ L + A + + +YP Sbjct: 233 RQNYGDAAASFLEVSTKYPNSTRAPEALLRLGQSLAGLGEKETACATLQEVDRKYP 288 Score = 42.8 bits (100), Expect = 0.049, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 39/146 (26%), Gaps = 23/146 (15%) Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 P +G + + L + Q Y A + I + + +++G S Sbjct: 177 PGSGGSVRELYDAGQAQLQRQDYAGAEQTFRQIIQSASGDRIIPDATFMLGESLFLR--- 233 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 + + +Y NS A + L KE Sbjct: 234 -----QNYGDAAASFLEVSTKYPNSTRAPEALLRLGQSLAGLGEKE-------------- 274 Query: 208 AAIPRFQLVLANYSDAE-HAEEAMAR 232 A Q V Y A +A+ R Sbjct: 275 TACATLQEVDRKYPRAPSSIRQAVER 300 >gi|149375119|ref|ZP_01892891.1| hypothetical protein MDG893_05859 [Marinobacter algicola DG893] gi|149360483|gb|EDM48935.1| hypothetical protein MDG893_05859 [Marinobacter algicola DG893] Length = 253 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 45/129 (34%), Gaps = 22/129 (17%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + Y QA + ++I +Y E YY +G Y + + Q + Sbjct: 142 HQEKNYDQAINGLYDFIDEYEEGDLTVNAYYWLGEVYLV--------EEQLEQARQAFTI 193 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + RY + A + + V ++L KE A R Q V+ +Y + Sbjct: 194 VATRYGDHRKAPDAVYKLGVTLDRLGDKE--------------QARGRMQTVVRDYPNTS 239 Query: 225 HAEEAMARL 233 AE A L Sbjct: 240 AAELAQKYL 248 Score = 38.9 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 18/124 (14%), Positives = 44/124 (35%), Gaps = 9/124 (7%) Query: 61 YEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y+K + +E+N+ +A ++ + + V + +QA Sbjct: 134 YQKIQTLIHQEKNYDQAINGLYDFIDEYEEGDLTVNAYYWLGEVYLVEEQLEQARQAFTI 193 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 T+Y + + Y +G++ ++ + M +V Y N+ + A+ Sbjct: 194 VATRYGDHRKAPDAVYKLGVTLDRL--------GDKEQARGRMQTVVRDYPNTSAAELAQ 245 Query: 180 FYVT 183 Y+ Sbjct: 246 KYLD 249 Score = 35.5 bits (81), Expect = 7.6, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 42/122 (34%), Gaps = 14/122 (11%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + Q I+ + + ++ + + ++ Y A +++ G Sbjct: 132 TDYQKIQTLIHQEKNYDQAINGLYDFIDEYEEGDLTVNAYYWL--------------GEV 177 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YL + A F +V Y D A +A+ +L L ++AR + + YP Sbjct: 178 YLVEEQLEQARQAFTIVATRYGDHRKAPDAVYKLGVTLDRLGDKEQARGRMQTVVRDYPN 237 Query: 260 GY 261 Sbjct: 238 TS 239 >gi|149918453|ref|ZP_01906943.1| Lytic transglycosylase [Plesiocystis pacifica SIR-1] gi|149820753|gb|EDM80163.1| Lytic transglycosylase [Plesiocystis pacifica SIR-1] Length = 796 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 74/229 (32%), Gaps = 50/229 (21%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKS---------------------------LLMSA 101 + ++ A E F + S D P + A ++ L Sbjct: 227 EAEDQRAAAELFERLSVDVPLSSYAEEARSELAKLERTKVVERSKAESKSLDRQRKLAEI 286 Query: 102 FVQYSAGKYQQAASLGEEYITQYPE---SK-NVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 S Y + + + +I Q S+ + Y G + + R P Q Sbjct: 287 DAHLSKRSYAETITAADRFIKQARGLGASEGDRCRALYAKGSAIFKQ-RKRPAAQPVFDQ 345 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 S + K A V +++ + R G+Y A RF+ + Sbjct: 346 A-------------SKHCKKAGDEVREVKSR-----YQAARGRYSAGKYSDAGTRFEALA 387 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 ++ D +A++A + E++ + +EAR+ ++P G A Sbjct: 388 KDHPDHSYADDAWIKAGESWESAGKAEEARKAYESSLAKHPDGDMADEA 436 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 33/82 (40%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 +VR + Y+ A +S A F ++D P A + + + SAGK ++ Sbjct: 356 EVREVKSRYQAARGRYSAGKYSDAGTRFEALAKDHPDHSYADDAWIKAGESWESAGKAEE 415 Query: 113 AASLGEEYITQYPESKNVDYVY 134 A E + ++P+ D Sbjct: 416 ARKAYESSLAKHPDGDMADEAL 437 >gi|171912386|ref|ZP_02927856.1| hypothetical protein VspiD_14440 [Verrucomicrobium spinosum DSM 4136] Length = 329 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 43/116 (37%), Gaps = 17/116 (14%) Query: 75 KAYEYFNQ---------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 +A E F +P + A +LL+ A + + GK + + + +E++ +P Sbjct: 60 EAAERFTAASTIEDCDVVVAKYPGSAAAGNALLLKADLLWKEGKKESSTEVLKEFLKSHP 119 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 E + L+ + QM D Q + + Y +S + A Y Sbjct: 120 EHTL--HATTLLALGSKQMALG-DKD-----GATQSFETLKKSYPDSELLPAADIY 167 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 33/83 (39%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++ + + + + A + F + +P + + + + +A + Sbjct: 112 KEFLKSHPEHTLHATTLLALGSKQMALGDKDGATQSFETLKKSYPDSELLPAADIYNADI 171 Query: 104 QYSAGKYQQAASLGEEYITQYPE 126 ++ GK +A +L E +++YP Sbjct: 172 LWADGKTSEAKALLEGMLSRYPG 194 >gi|158520339|ref|YP_001528209.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] gi|158509165|gb|ABW66132.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans Hxd3] Length = 401 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 31/100 (31%), Gaps = 12/100 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y K + +++ A F P + ++ M G+ ++ + ++ Sbjct: 23 LYVKGDYKFQTKDYDGAIADFTAYLEQKPDSF---QATYMLGRAYLEKGELDKSVATLKK 79 Query: 120 YITQYPESKN------VDYVY---YLVGMSYAQMIRDVPY 150 + P V YV Y ++ + D Sbjct: 80 ALEMNPGDPEAILFLGVAYVAKADYENAIATFESFEDPSR 119 >gi|253699348|ref|YP_003020537.1| hypothetical protein GM21_0705 [Geobacter sp. M21] gi|251774198|gb|ACT16779.1| conserved repeat domain protein [Geobacter sp. M21] Length = 847 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 31/80 (38%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 S +++ +++ + A + + + +P + ++ A Y AG Sbjct: 47 PSFALDSEDSQIFISGFNAYQKKEYRTAIDSMSVLLKKYPDTPLKDMAIFWLARAHYKAG 106 Query: 109 KYQQAASLGEEYITQYPESK 128 Q AA +++ +YP S Sbjct: 107 HQQDAAKYMAQFLREYPGSP 126 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 24/61 (39%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 ++ EY AI ++L Y D + A+ L A+ +A + ++ YP Sbjct: 66 YQKKEYRTAIDSMSVLLKKYPDTPLKDMAIFWLARAHYKAGHQQDAAKYMAQFLREYPGS 125 Query: 261 Y 261 Sbjct: 126 P 126 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 11/84 (13%), Positives = 30/84 (35%), Gaps = 8/84 (9%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y +Y+ A + +YP++ D + + ++ + + +YM++ Sbjct: 66 YQKKEYRTAIDSMSVLLKKYPDTPLKDMAIFWLARAHYKA--------GHQQDAAKYMAQ 117 Query: 165 IVERYTNSPYVKGARFYVTVGRNQ 188 + Y SP + ++ Sbjct: 118 FLREYPGSPLKATVEDGLLALADK 141 >gi|85859401|ref|YP_461603.1| protein ERFK [Syntrophus aciditrophicus SB] gi|85722492|gb|ABC77435.1| protein ERFK [Syntrophus aciditrophicus SB] Length = 314 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 +S G Y + S E+ + +YP D V + +G+ YA +Q+ + L+ Sbjct: 44 YFSQGNYIASLSKYEQIMKKYPA--AGDRVLFEMGIIYAY----PGNEQKDYQKSLECFQ 97 Query: 164 RIVERYTNSPYVKGARFYVTVGRN 187 ++++ Y S Y + + + N Sbjct: 98 KLLKDYPESRYRQDSVEMIAHVDN 121 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 36/93 (38%), Gaps = 6/93 (6%) Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL--VEAYVA 239 + + +A Y +G Y+A++ +++ ++ Y + + + + AY Sbjct: 26 ICACSHYMARPSFGEANEYFSQGNYIASLSKYEQIMKKYP--AAGDRVLFEMGIIYAYPG 83 Query: 240 LALMDEAR--EVVSLIQERYPQGYWARYVETLV 270 D + E + + YP+ + + ++ Sbjct: 84 NEQKDYQKSLECFQKLLKDYPESRYRQDSVEMI 116 >gi|148264741|ref|YP_001231447.1| lytic transglycosylase, catalytic [Geobacter uraniireducens Rf4] gi|146398241|gb|ABQ26874.1| Lytic transglycosylase, catalytic [Geobacter uraniireducens Rf4] Length = 715 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 50/152 (32%), Gaps = 8/152 (5%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 +A L WE + + +Y +A K ++A + ++ Sbjct: 63 MIGMAASRLEKWEEAADCLSRATEGFPLLADYALYHQARALNKLGKHAEALVPLRKVLKN 122 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 +P + + R + L+ Y +G Y+ A S E+I +YP + + + Q+ Sbjct: 123 YPESPLVRGAALLLGNTLYDSGDYKGALSAFGEFIEKYPAGADSLSALHKSALCREQLAD 182 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + I Y S A Sbjct: 183 MTG--------AVSILRSIALNYPASAVAVKA 206 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 46/127 (36%), Gaps = 10/127 (7%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + + + + +A + ++ + FP +A +L A GK+ +A + + Sbjct: 65 GMAASRLEKWEEAADCLSRATEGFPL--LADYALYHQARALNKLGKHAEALVPLRKVLKN 122 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 YPES V L+G + D K L +E+Y A Sbjct: 123 YPESPLVRGAALLLGNTLY--------DSGDYKGALSAFGEFIEKYPAGADSLSALHKSA 174 Query: 184 VGRNQLA 190 + R QLA Sbjct: 175 LCREQLA 181 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 71/233 (30%), Gaps = 36/233 (15%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQA 113 E+ + + +S+A + FN R P K + + + Y+ A Sbjct: 224 SPSELLHQGTILFDLGKYSQAVKTFNAARRQSPDLNGDFLTKLQFKTGQALFKSRHYKDA 283 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 E + + + + D V + + + A++ +D + ++ E S Sbjct: 284 ELAFNELLKKNLKKETSDDVRFWLARTNAKIGKD--------EEAFNTYLKLAESSPKST 335 Query: 174 YVKGARFYVTVGRNQ---------LAAKEVE--------------IGRYYLKRGEYVAAI 210 A + R L K + I + ++ A Sbjct: 336 LADDALLEAALIRKSQKKWDATLPLLQKSLHLYPDSNQSKNVIWEIAWGSYQTRDFKTAA 395 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 F + S E+A+ + +A A+ S + YP GY+A Sbjct: 396 EYFNKLANQEST---REKALYWRGRSLLAAGDPKSAQGCFSDLMSEYPLGYYA 445 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 22/131 (16%) Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 DY Y + ++ + L + ++++ Y SP V+GA + N L Sbjct: 92 ADYALYHQARALNKLGKHA--------EALVPLRKVLKNYPESPLVRGAAL---LLGNTL 140 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 G+Y A+ F + Y + A+ + LA M A + Sbjct: 141 -----------YDSGDYKGALSAFGEFIEKYPAGADSLSALHKSALCREQLADMTGAVSI 189 Query: 250 VSLIQERYPQG 260 + I YP Sbjct: 190 LRSIALNYPAS 200 >gi|85077237|ref|XP_955993.1| serine/threonine-protein phosphatase 5 [Neurospora crassa OR74A] gi|2290382|gb|AAB65138.1| serine/threonine protein phosphatase PPT1 [Neurospora crassa] gi|28917032|gb|EAA26757.1| serine/threonine-protein phosphatase 5 [Neurospora crassa OR74A] gi|28950344|emb|CAD70968.1| phosphoprotein phosphatase (ppt-1) [Neurospora crassa] Length = 479 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 40/135 (29%), Gaps = 26/135 (19%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + ++ KA E++++ + P + ++ Y A Sbjct: 13 NEGNKAFAAHDWPKAIEFYDKAIELNDKEP-TFWSNRAQ-----AHLKTEAYGYAIRDAT 66 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + I P YY +YA ++ K ++ V+ ++ A Sbjct: 67 KAIELNPGFVK---AYYRRATAYAAILN--------PKEAVKDFKTCVKIAPDNK---DA 112 Query: 179 RFYVTVG---RNQLA 190 + + QLA Sbjct: 113 KLKLVECEKIVRQLA 127 >gi|78485245|ref|YP_391170.1| TPR repeat-containing protein [Thiomicrospira crunogena XCL-2] gi|78363531|gb|ABB41496.1| Tol system YbgF protein [Thiomicrospira crunogena XCL-2] Length = 269 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 46/149 (30%), Gaps = 24/149 (16%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS + + ++ YE A +K+ ++ A + F+ +P + +A S Sbjct: 131 SSAATGVTTHAATAKEKRAYEAAFALMKKSDYQGASKAFSAFKATYPHSDLASNS----- 185 Query: 102 FVQYSAGKYQQAA-----SLGEEYIT---QYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 + +A + + ++ YP S L D Sbjct: 186 -AYWEGE--AEAVLGNDKAALKAFVDVYETYPTSLKAPAAM-LRAADMYD-------DLG 234 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYV 182 K ++++ Y + AR + Sbjct: 235 DKKKAKTLYEKLIQDYPKKNVAEKARKRL 263 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 33/102 (32%), Gaps = 14/102 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + S Y +S + ++ L G AA+ F V Sbjct: 165 ASKAFSAFKATYPHSDLASNSAYWEGEAEAVL--------------GNDKAALKAFVDVY 210 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y + A AM R + Y L +A+ + + + YP+ Sbjct: 211 ETYPTSLKAPAAMLRAADMYDDLGDKKKAKTLYEKLIQDYPK 252 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 41/135 (30%), Gaps = 22/135 (16%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 +AF YQ A+ + YP S Y G + A + D K Sbjct: 151 EAAFALMKKSDYQGASKAFSAFKATYPHSDLASNSAYWEGEAEAVLGND--------KAA 202 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 L+ + E Y S A Y G+ A ++ ++ Sbjct: 203 LKAFVDVYETYPTSLKAPAAMLR--------------AADMYDDLGDKKKAKTLYEKLIQ 248 Query: 219 NYSDAEHAEEAMARL 233 +Y AE+A RL Sbjct: 249 DYPKKNVAEKARKRL 263 >gi|189485310|ref|YP_001956251.1| putative lipoprotein [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287269|dbj|BAG13790.1| putative lipoprotein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 201 Score = 49.3 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 23/130 (17%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A+ Y K+ A S + + +YP ++ V + +G + M L+ Sbjct: 81 AYGDYLMAKFDLAYSGFQSFADKYPNAELVPQAQFYMGECFYSM--------SMWDKALE 132 Query: 161 YMSRIVERYTN-SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 ++ +RY S V AR + + +L E AI F ++ + Sbjct: 133 EYKKVEQRYKKRSDLVSSARLKIALCCQKLDKNE--------------EAIRMFSSIIKD 178 Query: 220 YSDAEHAEEA 229 + + + A Sbjct: 179 FPQSPESLTA 188 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 47/129 (36%), Gaps = 9/129 (6%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y+ A F AY F + +P A + ++ YS + +A ++ Sbjct: 77 IYQNAYGDYLMAKFDLAYSGFQSFADKYPNAELVPQAQFYMGECFYSMSMWDKALEEYKK 136 Query: 120 YITQY-PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +Y S V + + ++ ++ + ++ S I++ + SP A Sbjct: 137 VEQRYKKRSDLVSSARLKIALCCQKLDKN--------EEAIRMFSSIIKDFPQSPESLTA 188 Query: 179 RFYVTVGRN 187 + + + N Sbjct: 189 KESIEIYNN 197 Score = 35.9 bits (82), Expect = 6.0, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 37/106 (34%), Gaps = 15/106 (14%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L ++Y N+ V A+FY+ +Y + A+ ++ V Sbjct: 92 LAYSGFQSFADKYPNAELVPQAQFYMGEC-------------FY-SMSMWDKALEEYKKV 137 Query: 217 LANYS-DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y ++ A ++ L +EA + S I + +PQ Sbjct: 138 EQRYKKRSDLVSSARLKIALCCQKLDKNEEAIRMFSSIIKDFPQSP 183 >gi|89898740|ref|YP_515850.1| hypothetical protein CF0933 [Chlamydophila felis Fe/C-56] gi|89332112|dbj|BAE81705.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56] Length = 318 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 85/260 (32%), Gaps = 45/260 (17%) Query: 27 FFSIAVCFLVGWERQS------SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 F +++ G + S + E + +L++Q + +A F Sbjct: 7 FVVLSLLLCSGCYARPVSFEPFSGKLSPQKFVPKYSPEEYLSEGKYYLEQQRYRQALLCF 66 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VY 134 + FP + ++L ++ + + A Y+ + + DY + Sbjct: 67 GMITHHFPKDPLCTEALYLTGVCYFKNDQPDLAEKAFASYMQR----PDSDYSEELFLMK 122 Query: 135 YLVGMSYAQ-------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 Y + S+AQ ++ P A L+ I+ + N K + Sbjct: 123 YSIAQSFAQGKRKRIFLLEGFPKLANADADALRIYDEILTAFPN----KDLGAQALYLKG 178 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD--- 244 L + I + + AI F+ + + + ++ RL E Y+ A + Sbjct: 179 DL----LII------KKDLPEAIKTFKKLTLQFPSHALSPKSFVRLSEIYLMQAKKEPHN 228 Query: 245 -----EAREVVSLIQERYPQ 259 A+ I++++P Sbjct: 229 VQYLNLAKINEEAIKKQHPN 248 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 G+YYL++ Y A+ F ++ ++ EA+ Y D A + + +R Sbjct: 50 GKYYLEQQRYRQALLCFGMITHHFPKDPLCTEALYLTGVCYFKNDQPDLAEKAFASYMQR 109 Query: 257 YPQGYWA 263 P ++ Sbjct: 110 -PDSDYS 115 >gi|307718791|ref|YP_003874323.1| hypothetical protein STHERM_c11050 [Spirochaeta thermophila DSM 6192] gi|306532516|gb|ADN02050.1| hypothetical protein STHERM_c11050 [Spirochaeta thermophila DSM 6192] Length = 272 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 48/147 (32%), Gaps = 8/147 (5%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 L S Y ++ + L + +A E + ++L + Y Sbjct: 63 LSSADSPVYLEALFWYGKICLTLGEYDEARESLEAFLLRGGSHPLYEEALYQKGRLLYLE 122 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G YQ S ++ YP S+ V Y S + IVE Sbjct: 123 GDYQSCISHFNAFLASYPTSQFVPNALYWSAESLFSL--------GHFTEARPLYEHIVE 174 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEV 194 Y +SP + AR+ + + + +E+ Sbjct: 175 NYRSSPKAEAARYRMELIEYAMREEEL 201 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 56/155 (36%), Gaps = 19/155 (12%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 Y+ +Y+K L E ++ +FN +P + +L SA +S G + +A Sbjct: 108 YEEALYQKGRLLYLEGDYQSCISHFNAFLASYPTSQFVPNALYWSAESLFSLGHFTEARP 167 Query: 116 LGEEYITQYPESKNVDYVYYLVGMS-------------------YAQMIRDVPYDQRATK 156 L E + Y S + Y + + Y ++ ++ +R+ K Sbjct: 168 LYEHIVENYRSSPKAEAARYRMELIEYAMREEELLRLLKWSHEEYLKLAEELNQKERSYK 227 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 L + + + + V+ + + +L+ Sbjct: 228 EALSIYQQKLNQVPSLEEVEALKARIKELEAELSR 262 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 24/139 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQYMSRIV 166 G+Y +A E ++ + + Y G + Y + + + + + + Sbjct: 86 GEYDEARESLEAFLLRGGSHPLYEEALYQKGRLLYLE---------GDYQSCISHFNAFL 136 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 Y S +V A ++ L G + A P ++ ++ NY + A Sbjct: 137 ASYPTSQFVPNALYWSAESLFSL--------------GHFTEARPLYEHIVENYRSSPKA 182 Query: 227 EEAMARLVEAYVALALMDE 245 E A R+ A+ + Sbjct: 183 EAARYRMELIEYAMREEEL 201 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 62/179 (34%), Gaps = 26/179 (14%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 +LL AFV AG+Y QA + ++ + D YL + + I + Sbjct: 38 ALLRHAFVLVKAGEYIQAKEVFSRLLS------SADSPVYLEALFWYGKICLTLGEYDEA 91 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + L+ + + + G+Y + I F Sbjct: 92 RESLEAFLLRGGSHPLYEEALYQKGRLLYLE-----------------GDYQSCISHFNA 134 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY---PQGYWARYVETLVK 271 LA+Y ++ A+ E+ +L EAR + I E Y P+ ARY L++ Sbjct: 135 FLASYPTSQFVPNALYWSAESLFSLGHFTEARPLYEHIVENYRSSPKAEAARYRMELIE 193 >gi|115453163|ref|NP_001050182.1| Os03g0367000 [Oryza sativa Japonica Group] gi|108708340|gb|ABF96135.1| Peptidylprolyl isomerase PASTICCINO1, putative, expressed [Oryza sativa Japonica Group] gi|113548653|dbj|BAF12096.1| Os03g0367000 [Oryza sativa Japonica Group] gi|215768523|dbj|BAH00752.1| unnamed protein product [Oryza sativa Japonica Group] gi|218192902|gb|EEC75329.1| hypothetical protein OsI_11710 [Oryza sativa Indica Group] gi|222624979|gb|EEE59111.1| hypothetical protein OsJ_10973 [Oryza sativa Japonica Group] Length = 632 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 52/165 (31%), Gaps = 26/165 (15%) Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--------F 89 W + +++ D+ ++++ L + + K +N P F Sbjct: 393 WTGFTFQEIMDDAEKIKTTGNRLFKEGKFELAKAKYEKVLREYNHV---HPQDDDEGKIF 449 Query: 90 AGVARKSL-LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 A +R SL L A G+Y+++ + + P Y GMSY + Sbjct: 450 AN-SRSSLHLNVAACYQKMGEYRKSIDTCNKVLEANPVHVK---ALYRRGMSYMLL---- 501 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + +++ +S A + + + E Sbjct: 502 ----GDFDDAKKDFEKMIAVDKSSE--PDATAALNKLKQTIQETE 540 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 36/93 (38%), Gaps = 5/93 (5%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 +L +++ Y N + + ++ + + + Y K GEY +I Sbjct: 422 ELAKAKYEKVLREY-NHVHPQDDDEGKIFANSRSSLH-LNVAACYQKMGEYRKSIDTCNK 479 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 VL +A+ R +Y+ L D+A++ Sbjct: 480 VLEANP---VHVKALYRRGMSYMLLGDFDDAKK 509 >gi|330506325|ref|YP_004382753.1| tetratricopeptide repeat-containing protein [Methanosaeta concilii GP-6] gi|328927133|gb|AEB66935.1| Tetratricopeptide repeat protein [Methanosaeta concilii GP-6] Length = 315 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 30/234 (12%), Positives = 66/234 (28%), Gaps = 32/234 (13%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQC 83 I A + + +E + + + L+ + A E + + Sbjct: 5 FIALVCAALTMQCASAFAEDTASYWLDKGNESCKEAFNESGNMTLRNLILTDAVESYEKA 64 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + P + + + L A + G Y +A I P + + Y+ Y + Sbjct: 65 IQIEPHSSL---AWLKKAIAYFEMGNYIEALDSVNRSIEIDPVNAD---ALYMKAGFYGE 118 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 R T+ LQ + +E + Sbjct: 119 TGR--------TRDALQAFNETLEVDPERIDAW-----------------FWKADFLASM 153 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 G Y A+ + + ++ +A + + L D+A+ ++ E Y Sbjct: 154 GSYEEALNAYNRTIEIDPESMNAARSWDSKSYVLKKMGLEDQAKSAAAMAAETY 207 >gi|125973898|ref|YP_001037808.1| tetratricopeptide TPR_2 [Clostridium thermocellum ATCC 27405] gi|256005019|ref|ZP_05429990.1| Tetratricopeptide TPR_2 repeat protein [Clostridium thermocellum DSM 2360] gi|281418061|ref|ZP_06249081.1| Tetratricopeptide TPR_2 repeat protein [Clostridium thermocellum JW20] gi|125714123|gb|ABN52615.1| Tetratricopeptide TPR_2 [Clostridium thermocellum ATCC 27405] gi|255990987|gb|EEU01098.1| Tetratricopeptide TPR_2 repeat protein [Clostridium thermocellum DSM 2360] gi|281409463|gb|EFB39721.1| Tetratricopeptide TPR_2 repeat protein [Clostridium thermocellum JW20] gi|316939899|gb|ADU73933.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium thermocellum DSM 1313] Length = 385 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 50/161 (31%), Gaps = 34/161 (21%) Query: 49 DSVTDVRYQREVYEKAVLFLK------EQNFSKAYEYFNQCSRDFPFA------------ 90 D+ +V+ Q + Y A L+ + + +A + Sbjct: 232 DTFEEVKKQVDYYLNASKLLQIEKYASQNQYREAADLLLLLKNTAFTGVEKEKFDKLSQD 291 Query: 91 --GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV---YYLVGMSYAQMI 145 A + Y+ YQ+A E + S N Y Y +G+ Y ++ Sbjct: 292 VMPKAAQEEYNKGRELYNRKNYQEAV---ERFERSRSYSDNWRYAVNNLYYLGVCYQEL- 347 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 T L+ +V +Y N+ Y +R + R Sbjct: 348 -------NNTTKALEIFEEVVNKYPNTSYAGYSRERINYIR 381 Score = 38.9 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 31/77 (40%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A +E GR R Y A+ RF+ + + +A + L Y L +A E+ Sbjct: 297 AQEEYNKGRELYNRKNYQEAVERFERSRSYSDNWRYAVNNLYYLGVCYQELNNTTKALEI 356 Query: 250 VSLIQERYPQGYWARYV 266 + +YP +A Y Sbjct: 357 FEEVVNKYPNTSYAGYS 373 >gi|149910557|ref|ZP_01899196.1| hypothetical protein PE36_02549 [Moritella sp. PE36] gi|149806400|gb|EDM66373.1| hypothetical protein PE36_02549 [Moritella sp. PE36] Length = 252 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 22/117 (18%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + KY +A + +I+ YPES+ +Y +G+ + +D D +I Sbjct: 143 NERKYDEAIPALQSFISTYPESELAANAHYWLGL---LLRKDNKND-----EAKVEFEKI 194 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 V +Y S + + QLA G A F+LV+ +Y + Sbjct: 195 VTQYPASNKRADSLQKL----GQLAK----------LTGSNSEAKRYFELVIKDYPN 237 Score = 43.2 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 25/135 (18%) Query: 61 YEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQQ 112 Y A+ + E+ + +A +P + +A A Y K + Sbjct: 134 YNYAIKLIKNERKYDEAIPALQSFISTYPESELA-------ANAHYWLGLLLRKDNKNDE 186 Query: 113 AASLGEEYITQYPES-KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A E+ +TQYP S K D Q + + + +Y +++ Y N Sbjct: 187 AKVEFEKIVTQYPASNKRAD---------SLQKLGQLAKLTGSNSEAKRYFELVIKDYPN 237 Query: 172 SPYVKGARFYVTVGR 186 K A+ + + Sbjct: 238 DSVAKLAKQELAALK 252 Score = 39.3 bits (91), Expect = 0.64, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 42/132 (31%), Gaps = 14/132 (10%) Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 L G + ++R + + + Y S A +++ + Sbjct: 128 LTGKDSYNYAIKLIKNERKYDEAIPALQSFISTYPESELAANAHYWLGLLLR-------- 179 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 K + A F+ ++ Y + +++ +L + EA+ L+ + Sbjct: 180 ------KDNKNDEAKVEFEKIVTQYPASNKRADSLQKLGQLAKLTGSNSEAKRYFELVIK 233 Query: 256 RYPQGYWARYVE 267 YP A+ + Sbjct: 234 DYPNDSVAKLAK 245 >gi|56750099|ref|YP_170800.1| CytB protein [Synechococcus elongatus PCC 6301] gi|81300440|ref|YP_400648.1| TPR repeat-containing protein [Synechococcus elongatus PCC 7942] gi|56685058|dbj|BAD78280.1| CytB protein [Synechococcus elongatus PCC 6301] gi|81169321|gb|ABB57661.1| TPR repeat [Synechococcus elongatus PCC 7942] Length = 299 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 50/181 (27%), Gaps = 31/181 (17%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 L + + +A + + P L Y G+ Q A + ++ + Q P Sbjct: 68 RLSLERYEEAIKDCSVALDLQPHEPET---WLNRGLAYYRQGQSQAAIADFDQLLQQSPT 124 Query: 127 SKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 DY YY G++Y D + + + +ER + + Sbjct: 125 ----DYRAYYNRGLAY--------LDLAQPEQAIADFQQALERLPATEIGAAVDLHTDRC 172 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 +L R + A+ L A A AY L Sbjct: 173 MGEL------------HRAQPGPAVSACSQALELQP---SAARARYLRALAYWQLHQPQA 217 Query: 246 A 246 A Sbjct: 218 A 218 >gi|294627091|ref|ZP_06705679.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598524|gb|EFF42673.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 609 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 38/111 (34%), Gaps = 9/111 (8%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 ++ + C L + ++ D L D Q+ + + V ++ +F+ A + Sbjct: 324 FRRRAVVAVLATACVLPLAQPANAADGTLWQRADQVQQQRL-DAGVQAYRKGDFAAAQKA 382 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 F + L G+Y A + + + Q+P ++ Sbjct: 383 FEAVP--------TDEGLYNLGNALARQGQYDAAIAAYDRVLKQHPNQQDA 425 >gi|32477301|ref|NP_870295.1| hypothetical protein RB12056 [Rhodopirellula baltica SH 1] gi|32447852|emb|CAD77370.1| conserved hypothetical protein containing TPR domain [Rhodopirellula baltica SH 1] Length = 1113 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 71/224 (31%), Gaps = 36/224 (16%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR------DFPFAGVAR-KS 96 +++ + + Y+ L EQ ++ A EYF PFA A+ + Sbjct: 614 KELIRSNGESRMADQARYKLGQLANGEQQYAAAIEYFEPILASKRDAGLLPFARYAKGMA 673 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L + ++++AA E I Q P+ D G++Y + R+ Sbjct: 674 EL-------QSQQHERAAESFSELIDQNPDHTLSDDALLSRGIAYRHLNREAD------- 719 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 ++ ++ + A + + + + V A Q + Sbjct: 720 -SRNDLNAYLDSKPTGNNLGHALYELALLDQNASQT--------------VQAAESLQRI 764 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + D ++ + L + D+A + +YP Sbjct: 765 VDEVPDYPDMDKVLYELGWSLRESGKDDQALTKFEQLIAKYPDN 808 Score = 47.0 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 64/196 (32%), Gaps = 35/196 (17%) Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD--- 131 ++ ++ ++ P + + ++ QY+ G+ +A + ++ Sbjct: 150 ESIATYDTLIKEIPDSRLLDRAYFYRGEAQYALGELDKAIESYNAMMKL----DDIASSA 205 Query: 132 ---YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 Y G++ + Q+ ++++ +S V + Sbjct: 206 LRCDALYARGVALEE--------QKNYDQAQSSYQQLLQACADSDLVVDVEIRMGDM--H 255 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA--MARLVEAYVALALMDEA 246 L E++ A+ RF V+ N +DA ++A R AY +A Sbjct: 256 LLQGEMQ------------KAVERFDSVVTN-ADATAEDKAYSFFRQGYAYAQDGDPTKA 302 Query: 247 REVVSLIQERYPQGYW 262 + ++PQ + Sbjct: 303 SASYEKLLTQFPQSPY 318 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 61/171 (35%), Gaps = 26/171 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K + L+ Q +A E F++ P ++ +LL + + + Y Sbjct: 668 YAKGMAELQSQQHERAAESFSELIDQNPDHTLSDDALLSRGIAYRHLNREADSRNDLNAY 727 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK--LMLQYMSRIVERYTNSPYVKGA 178 + P N+ + Y + + DQ A++ + + RIV+ + P + Sbjct: 728 LDSKPTGNNLGHALYELAL----------LDQNASQTVQAAESLQRIVDEVPDYPDMDKV 777 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 + + + G+ A+ +F+ ++A Y D +A Sbjct: 778 LYELGWSLR--------------ESGKDDQALTKFEQLIAKYPDNALVADA 814 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 12/135 (8%), Positives = 36/135 (26%), Gaps = 17/135 (12%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 S D + + + + A +++ FP + Sbjct: 918 ADNDSAKTVRDKAERQVRELILLHGGQSAAQLGQYEDAIGWYDALRERFPATTYLPQVFY 977 Query: 99 MSAFVQYSAGKYQQAA----SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 F +AG ++A + + + S+ +++G + + Sbjct: 978 EIGFAAQNAGDDEKALKFYSEVADNF-----RSEIAARARFMMGEIHFAN--------KT 1024 Query: 155 TKLMLQYMSRIVERY 169 + R++ + Sbjct: 1025 FDKAIPEFQRVMFGF 1039 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 71/216 (32%), Gaps = 30/216 (13%) Query: 52 TDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D + + Y + + ++ + +KA + + FP + A + L SA Y AG Sbjct: 275 ADATAEDKAYSFFRQGYAYAQDGDPTKASASYEKLLTQFPQSPYAAAATLASAQTLYQAG 334 Query: 109 KYQQAASLGEEYIT-QYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 AAS + ++L + RD A K S + Sbjct: 335 DLSGAAS---RFRDVLQGTDPVAATESAHWLARIDLGIANRDPSRTAEAAKSAYDVASEL 391 Query: 166 VERYTNSPYVK----GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + + + A +++ ++L A ++Q + + +S Sbjct: 392 IAKGPQGSFAVALKLDAAEALSLQPDRLND-----------------AFEQYQSIASEHS 434 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 D A A+ + L ++A ++ + ++ Sbjct: 435 DHPLAPRALYNAAFVALQLGNTEQAVKLADSFESKF 470 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 47/130 (36%), Gaps = 15/130 (11%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D + +Y + V +++N+ +A + Q + + + + + G Sbjct: 200 DIASSALRCDALYARGVALEEQKNYDQAQSSYQQLLQACADSDLVVDVEIRMGDMHLLQG 259 Query: 109 KYQQAASLGEEY----ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + Q+A E + +++ Y ++ G +YAQ D + Sbjct: 260 EMQKAV---ERFDSVVTNADATAEDKAYSFFRQGYAYAQ-----DGDPT---KASASYEK 308 Query: 165 IVERYTNSPY 174 ++ ++ SPY Sbjct: 309 LLTQFPQSPY 318 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 37/97 (38%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T +YE A+L +A E + + P K L + +GK Sbjct: 731 KPTGNNLGHALYELALLDQNASQTVQAAESLQRIVDEVPDYPDMDKVLYELGWSLRESGK 790 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 QA + E+ I +YP++ V Y VG + + + Sbjct: 791 DDQALTKFEQLIAKYPDNALVADAAYFVGQDHYRNSK 827 Score = 35.5 bits (81), Expect = 8.5, Method: Composition-based stats. Identities = 35/256 (13%), Positives = 69/256 (26%), Gaps = 63/256 (24%) Query: 48 LDSVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRDFP------------------ 88 +D V D + +YE + +A F Q +P Sbjct: 765 VDEVPDYPDMDKVLYELGWSLRESGKDDQALTKFEQLIAKYPDNALVADAAYFVGQDHYR 824 Query: 89 FAGVA-------------------RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + KSL + Y KY +A + + Sbjct: 825 NSKWGDAAAAFQIAADKSNDLDLKEKSLYRLGWCFYKQQKYAEAEAAFKR---------- 874 Query: 130 VDYVYYLVG---MSYAQMIRDVPYDQRATKLMLQYM---SRIVERYTNSPYV--KGARFY 181 YV G + MI + + Q + L+ +E +S A Sbjct: 875 -QYVEVQQGGLLLDSMMMIGESRFKQEQYETALRAYTKAREKIEADNDSAKTVRDKAERQ 933 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 V + G+ + G+Y AI + + + + + + A Sbjct: 934 VRELIL------LHGGQSAAQLGQYEDAIGWYDALRERFPATTYLPQVFYEIGFAAQNAG 987 Query: 242 LMDEAREVVSLIQERY 257 ++A + S + + + Sbjct: 988 DDEKALKFYSEVADNF 1003 Score = 35.5 bits (81), Expect = 9.3, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 8/81 (9%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 R +Y A + L+ N +A + + F +A + + A ++G A+S Sbjct: 439 APRALYNAAFVALQLGNTEQAVKLADSFESKFSSDPLAPDASFVGAEALLASGD---ASS 495 Query: 116 LGEEYITQ-----YPESKNVD 131 E Y T + + + Sbjct: 496 AAERYQTLIDDAKHRDHPQLA 516 >gi|311234963|gb|ADP87817.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio vulgaris RCH1] Length = 1070 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 27/189 (14%), Positives = 55/189 (29%), Gaps = 29/189 (15%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 D + ++ + KA + F ++ P + R+S + A + G Sbjct: 529 PHDDNIPLAYFYLGEDQFRKGQYQKAADQFQYILQNHPESRYVRESSVFLARSLHRLGYL 588 Query: 111 QQAASLGE----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 +QA+++ + + Y E+ Y M DV Sbjct: 589 EQASAIMDFVDKRWPRLYLETPE-----------YLLMAADVETQTGRLDQARASYWTYF 637 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + + G Y ++ + AA ++ L + D + Sbjct: 638 NIHPEGAENDVVLAKL--------------GDIYAQQKQDKAAREIYEEALRRFPDKDGG 683 Query: 227 EEAMARLVE 235 A+ RL E Sbjct: 684 LIALLRLTE 692 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 76/222 (34%), Gaps = 31/222 (13%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLL---M 99 D + V ++ +A + +++ A E P + + + L Sbjct: 405 DEKGNPVPPPPDPPQLLAEAKSLISTKDWPGALERLGLLKGL-PDIPSDMREEVLYLISD 463 Query: 100 SAFVQYSA---GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + F Q+ Y+ E + S V + + T+ Sbjct: 464 TLFAQHKDTILEGYESIMDATSEAMNYNIRSPRVP--------LALLRLGLLNLRAGNTR 515 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Y + + +Y + + A FY+ + ++G+Y A +FQ + Sbjct: 516 EAEAYFALMKRQYPHDDNIPLAYFYLGEDQ--------------FRKGQYQKAADQFQYI 561 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 L N+ ++ + E+ L + L +++A ++ + +R+P Sbjct: 562 LQNHPESRYVRESSVFLARSLHRLGYLEQASAIMDFVDKRWP 603 >gi|119510065|ref|ZP_01629205.1| hypothetical protein N9414_19622 [Nodularia spumigena CCY9414] gi|119465252|gb|EAW46149.1| hypothetical protein N9414_19622 [Nodularia spumigena CCY9414] Length = 219 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 20/131 (15%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP---FAGVARKSLLMS 100 + T + ++ ++A + +F+ A E + FP F Sbjct: 46 EKLAQSRGTPEEERSQLIQQAKTLSSQGDFTGAEENLRTLIKKFPRYAFGHF------EL 99 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 V + K ++A E I Y +G+ YA Q + + Sbjct: 100 GNVLFRQEKPEEAIKAYREAIRLNSNH---ALAYNGIGLVYAS--------QSLWEEAIA 148 Query: 161 YMSRIVERYTN 171 + +E N Sbjct: 149 AYQKALEINPN 159 >gi|150397823|ref|YP_001328290.1| Tol-Pal system YbgF [Sinorhizobium medicae WSM419] gi|150029338|gb|ABR61455.1| Tol-Pal system YbgF [Sinorhizobium medicae WSM419] Length = 345 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 41/126 (32%), Gaps = 14/126 (11%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++Y+ A + ++ A + F FP A + QYS GKY A Sbjct: 221 PGDLYQSAYGHVLSGDYGIAEQEFRNYLEAFPSGDKAADASFWMGEAQYSQGKYSDA--- 277 Query: 117 GEEYITQYPES---KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + ++ + + +GMS + + + + +RY + Sbjct: 278 AKTFLNAHQSHGKSPKAPEMLLKLGMSLGALDNK--------ETACATLREVGKRYPKAS 329 Query: 174 YVKGAR 179 A+ Sbjct: 330 PAVKAK 335 Score = 42.4 bits (99), Expect = 0.071, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 Q +E + + A F++ + +G+Y A F Sbjct: 240 AEQEFRNYLEAFPSGDKAADASFWMGEAQ--------------YSQGKYSDAAKTFLNAH 285 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 ++ + A E + +L + AL + A + + +RYP+ Sbjct: 286 QSHGKSPKAPEMLLKLGMSLGALDNKETACATLREVGKRYPKAS 329 >gi|18406066|ref|NP_565985.1| PP5.2 (PROTEIN PHOSPHATASE 5.2); phosphoprotein phosphatase/ protein binding / protein serine/threonine phosphatase [Arabidopsis thaliana] gi|16930441|gb|AAL31906.1|AF419574_1 At2g42810/F7D19.19 [Arabidopsis thaliana] gi|20197966|gb|AAD21727.2| putative phosphoprotein phosphatase [Arabidopsis thaliana] gi|33589766|gb|AAQ22649.1| At2g42810/F7D19.19 [Arabidopsis thaliana] gi|330255077|gb|AEC10171.1| serine/threonine-protein phosphatase 5 [Arabidopsis thaliana] Length = 484 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 41/143 (28%), Gaps = 29/143 (20%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARKSLLMSAFVQ 104 + +DV E +A K +S A + + + + A ++ F Sbjct: 5 NENSDVSRAEEFKSQANEAFKGHKYSSAIDLYTKAIELNSNNAVY--WANRA-----FAH 57 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 +Y A + I + Y YY G +Y M K L+ Sbjct: 58 TKLEEYGSAIQDASKAIEV-----DSRYSKGYYRRGAAYLAM--------GKFKDALKDF 104 Query: 163 SRIVERYTNSPYVKGARFYVTVG 185 ++ N P A + Sbjct: 105 QQVKRLSPNDP---DATRKLKEC 124 >gi|46581300|ref|YP_012108.1| TPR domain-containing protein [Desulfovibrio vulgaris str. Hildenborough] gi|46450721|gb|AAS97368.1| TPR domain protein [Desulfovibrio vulgaris str. Hildenborough] Length = 1076 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 27/189 (14%), Positives = 55/189 (29%), Gaps = 29/189 (15%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 D + ++ + KA + F ++ P + R+S + A + G Sbjct: 535 PHDDNIPLAYFYLGEDQFRKGQYQKAADQFQYILQNHPESRYVRESSVFLARSLHRLGYL 594 Query: 111 QQAASLGE----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 +QA+++ + + Y E+ Y M DV Sbjct: 595 EQASAIMDFVDKRWPRLYLETPE-----------YLLMAADVETQTGRLDQARASYWTYF 643 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + + G Y ++ + AA ++ L + D + Sbjct: 644 NIHPEGAENDVVLAKL--------------GDIYAQQKQDKAAREIYEEALRRFPDKDGG 689 Query: 227 EEAMARLVE 235 A+ RL E Sbjct: 690 LIALLRLTE 698 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 76/222 (34%), Gaps = 31/222 (13%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLL---M 99 D + V ++ +A + +++ A E P + + + L Sbjct: 411 DEKGNPVPPPPDPPQLLAEAKSLISTKDWPGALERLGLLKGL-PDIPSDMREEVLYLISD 469 Query: 100 SAFVQYSA---GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + F Q+ Y+ E + S V + + T+ Sbjct: 470 TLFAQHKDTILEGYESIMDATSEAMNYNIRSPRVP--------LALLRLGLLNLRAGNTR 521 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Y + + +Y + + A FY+ + ++G+Y A +FQ + Sbjct: 522 EAEAYFALMKRQYPHDDNIPLAYFYLGEDQ--------------FRKGQYQKAADQFQYI 567 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 L N+ ++ + E+ L + L +++A ++ + +R+P Sbjct: 568 LQNHPESRYVRESSVFLARSLHRLGYLEQASAIMDFVDKRWP 609 >gi|254294752|ref|YP_003060775.1| tol-pal system protein YbgF [Hirschia baltica ATCC 49814] gi|254043283|gb|ACT60078.1| tol-pal system protein YbgF [Hirschia baltica ATCC 49814] Length = 284 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 16/131 (12%), Positives = 42/131 (32%), Gaps = 10/131 (7%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 +S+ ++ + + +++ +A L + ++ A F P A ++ Sbjct: 145 ASKPADIEDLPED--PSKLFRQAKNLLLKGDYPAAETAFAHLVSTHPDVPEAAEAQYWLG 202 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + +AA I YP++ S ++ R + T Sbjct: 203 ESLLIQEAFPEAAEAYVALIRNYPDAPKAPD-------SLVKLARSL-RMMGDTTQACGA 254 Query: 162 MSRIVERYTNS 172 ++ + Y + Sbjct: 255 LTELSNLYPQT 265 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 38/105 (36%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + +V + + P A++++ L + + A + + Sbjct: 176 AAETAFAHLVSTHPDVPEAAEAQYWLGESL--------------LIQEAFPEAAEAYVAL 221 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + NY DA A +++ +L + + +A ++ + YPQ Sbjct: 222 IRNYPDAPKAPDSLVKLARSLRMMGDTTQACGALTELSNLYPQTN 266 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 24/76 (31%), Gaps = 8/76 (10%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G Y A + ++ +P+ Y +G S Q A + ++ Sbjct: 172 GDYPAAETAFAHLVSTHPDVPEAAEAQYWLGESL--------LIQEAFPEAAEAYVALIR 223 Query: 168 RYTNSPYVKGARFYVT 183 Y ++P + + Sbjct: 224 NYPDAPKAPDSLVKLA 239 Score = 39.3 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 +G+Y AA F +++ + D A EA L E+ + EA E + YP Sbjct: 171 KGDYPAAETAFAHLVSTHPDVPEAAEAQYWLGESLLIQEAFPEAAEAYVALIRNYPDA-- 228 Query: 263 ARYVETLVK 271 + ++LVK Sbjct: 229 PKAPDSLVK 237 >gi|120601520|ref|YP_965920.1| TPR repeat-containing protein [Desulfovibrio vulgaris DP4] gi|120561749|gb|ABM27493.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris DP4] Length = 1070 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 27/189 (14%), Positives = 55/189 (29%), Gaps = 29/189 (15%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 D + ++ + KA + F ++ P + R+S + A + G Sbjct: 529 PHDDNIPLAYFYLGEDQFRKGQYQKAADQFQYILQNHPESRYVRESSVFLARSLHRLGYL 588 Query: 111 QQAASLGE----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 +QA+++ + + Y E+ Y M DV Sbjct: 589 EQASAIMDFVDKRWPRLYLETPE-----------YLLMAADVETQTGRLDQARASYWTYF 637 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + + G Y ++ + AA ++ L + D + Sbjct: 638 NIHPEGAENDVVLAKL--------------GDIYAQQKQDKAAREIYEEALRRFPDKDGG 683 Query: 227 EEAMARLVE 235 A+ RL E Sbjct: 684 LIALLRLTE 692 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 76/222 (34%), Gaps = 31/222 (13%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLL---M 99 D + V ++ +A + +++ A E P + + + L Sbjct: 405 DEKGNPVPPPPDPPQLLAEAKSLISTKDWPGALERLGLLKGL-PDIPSDMREEVLYLISD 463 Query: 100 SAFVQYSA---GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + F Q+ Y+ E + S V + + T+ Sbjct: 464 TLFAQHKDSILEGYESIMDATSEAMNYNIRSPRVP--------LALLRLGLLNLRAGNTR 515 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Y + + +Y + + A FY+ + ++G+Y A +FQ + Sbjct: 516 EAEAYFALMKRQYPHDDNIPLAYFYLGEDQ--------------FRKGQYQKAADQFQYI 561 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 L N+ ++ + E+ L + L +++A ++ + +R+P Sbjct: 562 LQNHPESRYVRESSVFLARSLHRLGYLEQASAIMDFVDKRWP 603 >gi|221134412|ref|ZP_03560717.1| tetratricopeptide TPR_2 [Glaciecola sp. HTCC2999] Length = 272 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 45/135 (33%), Gaps = 25/135 (18%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 K+ + A E+++ YP+S+ +Y +G + + Sbjct: 156 KAAVDLI---LKQRDTAAAIPALEKFVDDYPQSRFKPNAHYWLGQIFYNG--------KN 204 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 + ++ + +Y S V A + + L+ A F+ Sbjct: 205 WQDAKKHFGTLYTQYPTSNKVADATLKLGIIAKSLSDN--------------KNAREYFE 250 Query: 215 LVLANYSDAEHAEEA 229 V+AN++D A+ A Sbjct: 251 KVIANHADTTSAKLA 265 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 14/127 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + D+ QR T + + + V+ Y S + A +++ +Y Sbjct: 155 YKAAVDLILKQRDTAAAIPALEKFVDDYPQSRFKPNAHYWLGQI-------------FY- 200 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + A F + Y + +A +L +L+ ARE + + Sbjct: 201 NGKNWQDAKKHFGTLYTQYPTSNKVADATLKLGIIAKSLSDNKNAREYFEKVIANHADTT 260 Query: 262 WARYVET 268 A+ + Sbjct: 261 SAKLAQE 267 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 53/149 (35%), Gaps = 15/149 (10%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 Q S + T Y+ AV LK+++ + A + D+P + + Sbjct: 135 QPSASLDASVATQSDNDAVDYKAAVDLILKQRDTAAAIPALEKFVDDYPQSRFKPNAHYW 194 Query: 100 SAFVQYSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + Y+ +Q A + + T YP S V +G+ + + K Sbjct: 195 LGQIFYNGKNWQDAK---KHFGTLYTQYPTSNKVADATLKLGIIAKSLSDN--------K 243 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVG 185 +Y +++ + ++ K A+ + + Sbjct: 244 NAREYFEKVIANHADTTSAKLAQEQINLL 272 >gi|307154460|ref|YP_003889844.1| Lytic transglycosylase catalytic [Cyanothece sp. PCC 7822] gi|306984688|gb|ADN16569.1| Lytic transglycosylase catalytic [Cyanothece sp. PCC 7822] Length = 724 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 34/249 (13%), Positives = 66/249 (26%), Gaps = 59/249 (23%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + + L + R Y A +K+ A + +++P +A LL Sbjct: 74 KTIALSEKPSLERSRARYILATELIKKYEGGPALRFLEGLEQEYPT--LAPWILLKQGRG 131 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + + A ++ I YP V Y +G YD + Sbjct: 132 YELSNENDLAQETWKKLIQTYPSDPVVAEALYYLG----------KYDPKYWDQA----- 176 Query: 164 RIVERYTNSPYVKGARFY------------------------VTVGRNQLAAK---EVE- 195 + ++ N P + R++L E+ Sbjct: 177 --ISQFPNHPRTWEIINKRLKDNPKQPKLMLLLVKYNAFDPSMNAVRDRLVKDYAPELTP 234 Query: 196 -----IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 IG Y + G+Y + Y A + R +A++ Sbjct: 235 QDWEVIGNGYWEFGDY-------RKATQAYYKASRTPVNLYRYARGLHLSGQKAQAKQAY 287 Query: 251 SLIQERYPQ 259 + +P Sbjct: 288 QQLVRSFPD 296 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 76/226 (33%), Gaps = 28/226 (12%) Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 WE R R +Y A ++A + + Q R FP A ++L Sbjct: 245 WEFGDYRKATQAYYKASRTPVNLYRYARGLHLSGQKAQAKQAYQQLVRSFPDAPETGEAL 304 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + +A + I ++P + A+++ + Q A+K Sbjct: 305 MRLV----GLSGSSEALGYLDYAINKFPL--QAPDAL----LKRAELLDLLNSKQAASK- 353 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 +++ +Y NS A +I + Y +G+ V A Q + Sbjct: 354 ---ARQQLLVQYPNSEAA--------------AGYRWKIAKSYADKGDLVKAWEWAQPIT 396 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 N D A +A + + L +A++ RYPQ Y+A Sbjct: 397 INAPDTTVAAKAGFWVGKWAQKLNRPQDAKDAFLHTLARYPQSYYA 442 >gi|120554617|ref|YP_958968.1| tetratricopeptide domain-containing protein [Marinobacter aquaeolei VT8] gi|120324466|gb|ABM18781.1| Tetratricopeptide domain protein [Marinobacter aquaeolei VT8] Length = 258 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 43/129 (33%), Gaps = 22/129 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 Y A + E++ YPE YY +G Y + + Q + + Sbjct: 150 KDYDTAITRLYEFVDTYPEGDLTVNAYYWLGEVYLAKPQ--------LEQARQAFTIVAT 201 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 RY++ A + + V ++L K A R V+ Y D+ AE Sbjct: 202 RYSDHRKAPDAVYKLGVTLDRLGEK--------------GEARRRMTSVVEQYPDSGAAE 247 Query: 228 EAMARLVEA 236 A L A Sbjct: 248 LAKKYLDSA 256 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 17/136 (12%), Positives = 51/136 (37%), Gaps = 9/136 (6%) Query: 52 TDVRYQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + +++ Y + + ++++ A + +P + + V + + Sbjct: 130 SPEPEEQKTYNDIIDLIRNKKDYDTAITRLYEFVDTYPEGDLTVNAYYWLGEVYLAKPQL 189 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +QA T+Y + + Y +G++ ++ + M+ +VE+Y Sbjct: 190 EQARQAFTIVATRYSDHRKAPDAVYKLGVTLDRL--------GEKGEARRRMTSVVEQYP 241 Query: 171 NSPYVKGARFYVTVGR 186 +S + A+ Y+ + Sbjct: 242 DSGAAELAKKYLDSAQ 257 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 44/119 (36%), Gaps = 14/119 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 I D+ +++ + + V+ Y A +++ G YL Sbjct: 139 YNDIIDLIRNKKDYDTAITRLYEFVDTYPEGDLTVNAYYWL--------------GEVYL 184 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + A F +V YSD A +A+ +L L EAR ++ + E+YP Sbjct: 185 AKPQLEQARQAFTIVATRYSDHRKAPDAVYKLGVTLDRLGEKGEARRRMTSVVEQYPDS 243 >gi|310822352|ref|YP_003954710.1| hypothetical protein STAUR_5111 [Stigmatella aurantiaca DW4/3-1] gi|309395424|gb|ADO72883.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 268 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 37/139 (26%), Gaps = 22/139 (15%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + A G + + + Q P + D Y G+ +I D Sbjct: 148 AEFEQAVAALRTGNVEAGVVRLQAFAEQNPRHAHADNALYFSGL---GLIGLKDLD---- 200 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + R++ Y V + R LK + A + Sbjct: 201 -GASRLFERLINNYPAGDAVLDGMLRLAECR--------------LKLKQPEDARALYTR 245 Query: 216 VLANYSDAEHAEEAMARLV 234 V+ + A +A RL Sbjct: 246 VITQFPGTAAATQAEQRLA 264 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 27/77 (35%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + +Y + + ++ A F + ++P +L A + + Sbjct: 176 NPRHAHADNALYFSGLGLIGLKDLDGASRLFERLINNYPAGDAVLDGMLRLAECRLKLKQ 235 Query: 110 YQQAASLGEEYITQYPE 126 + A +L ITQ+P Sbjct: 236 PEDARALYTRVITQFPG 252 Score = 38.6 bits (89), Expect = 0.87, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 39/146 (26%), Gaps = 8/146 (5%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 + D + +E+AV L+ N + P A +L Sbjct: 129 SSAPADAPASEPVNTALLDAEFEQAVAALRTGNVEAGVVRLQAFAEQNPRHAHADNALYF 188 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 S A+ L E I YP V + + + + + Sbjct: 189 SGLGLIGLKDLDGASRLFERLINNYPAGDAV--------LDGMLRLAECRLKLKQPEDAR 240 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVG 185 +R++ ++ + A + Sbjct: 241 ALYTRVITQFPGTAAATQAEQRLASL 266 >gi|242279824|ref|YP_002991953.1| hypothetical protein Desal_2358 [Desulfovibrio salexigens DSM 2638] gi|242122718|gb|ACS80414.1| hypothetical protein Desal_2358 [Desulfovibrio salexigens DSM 2638] Length = 335 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 37/75 (49%) Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 G Y+ + A+ ++ ++ Y + + E A+ + ++ L ++A E V +E Sbjct: 261 GLYFYHLNDVNGALRSYRRIIREYHNTPYYENALYGAIRCFMQLGQNEKAAEYVRRYEEL 320 Query: 257 YPQGYWARYVETLVK 271 +P G + +++LV+ Sbjct: 321 FPDGNHVQGLDSLVR 335 >gi|241206182|ref|YP_002977278.1| tol-pal system protein YbgF [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860072|gb|ACS57739.1| tol-pal system protein YbgF [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 328 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 54/161 (33%), Gaps = 16/161 (9%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 + + + + + Y+ A + ++S A + F Q +P + Sbjct: 180 ATIGSGPIPDANTKTPQQTASLGSEADQYKAAYGHVLSGDYSTAEQEFTQYITHYPSSAR 239 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP---ESKNVDYVYYLVGMSYAQMIRDVP 149 A + YS GKY +A + ++ + S+ + +GMS A + Sbjct: 240 AADANFWLGEALYSQGKYNEA---AKTFLNAHQKYGTSEKAPEMLLKLGMSLAALDN--- 293 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 T+ + + +RY + V + +LA Sbjct: 294 -----TETACATLREVSKRYPKASRA--VISKVASEQKRLA 327 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 Q ++ + Y +S A F++ +G+Y A F Sbjct: 223 AEQEFTQYITHYPSSARAADANFWLGEAL--------------YSQGKYNEAAKTFLNAH 268 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y +E A E + +L + AL + A + + +RYP+ Sbjct: 269 QKYGTSEKAPEMLLKLGMSLAALDNTETACATLREVSKRYPKAS 312 >gi|253748233|gb|EET02493.1| Protein F54C1.5 [Giardia intestinalis ATCC 50581] Length = 673 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 8/77 (10%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 +++Q + +A E P A SLL AF YSAG Y+ A SL +E ++P S Sbjct: 18 IRDQEWDQAIEILKDQLAQHPGNR-AALSLL--AFCNYSAGNYEDAVSLYQELCQRHPTS 74 Query: 128 KNVDYVYYLVGMSYAQM 144 + Y + ++ A++ Sbjct: 75 ER-----YQLALANARL 86 >gi|83646050|ref|YP_434485.1| TPR repeat-containing protein [Hahella chejuensis KCTC 2396] gi|83634093|gb|ABC30060.1| FOG: TPR repeat [Hahella chejuensis KCTC 2396] Length = 605 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 72/202 (35%), Gaps = 36/202 (17%) Query: 60 VYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +++A+ + K+ + KA + +A ++ +GK++ A S+ + Sbjct: 291 YFQRALTYAKKDDHDKAVSDYQSALKDKALPENLAVQA----GDYFAQSGKHELAESVYK 346 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + + + YY S Q+ Q S +++ Y ++P Sbjct: 347 DLMKR----SETPFPYYQRLGSLYQL-------QNDASKAKAVYSDLLKTYPDNP----- 390 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + G ++ +Y AA F+ L D+ A A A Sbjct: 391 ------------QSYLYAGSFHAFTRDYAAAADLFEKGLKLAPDSSSLRMAKAV---ALK 435 Query: 239 ALALMDEAREVVSLIQERYPQG 260 L +D+A++ + ++ + P+ Sbjct: 436 QLGTLDKAQQEMEILVKNNPES 457 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 65/224 (29%), Gaps = 44/224 (19%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDF--PFAGVARK 95 + + Y ++ D + +A + + A + + PF R Sbjct: 303 DHDKAVSDYQSALKDKALPENLAVQAGDYFAQSGKHELAESVYKDLMKRSETPFPYYQRL 362 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 L +A ++ + + YP++ YL S+ RD Sbjct: 363 GSL-----YQLQNDASKAKAVYSDLLKTYPDNPQS----YLYAGSFHAFTRDYA------ 407 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL--AAKEVEIGRYYLKRGEYVAAIPRF 213 + ++ +S ++ A+ L A +E+EI Sbjct: 408 -AAADLFEKGLKLAPDSSSLRMAKAVALKQLGTLDKAQQEMEI----------------- 449 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256 ++ N ++ E + L Y D+A +++ Sbjct: 450 --LVKNNPES---HEGLFLLGSLYEEDKKTDKAIDAYRRVLRLN 488 >gi|149922944|ref|ZP_01911364.1| transmembrane sensor, putative [Plesiocystis pacifica SIR-1] gi|149816195|gb|EDM75702.1| transmembrane sensor, putative [Plesiocystis pacifica SIR-1] Length = 452 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 49/129 (37%), Gaps = 14/129 (10%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + D+ +A Q + R+ ER+ + A ++AA Sbjct: 336 MLDLADLARFNKARGDARQVLERLRERFPGTRSAGEA----AFLLGKMAA---------- 381 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + G + A F+ L H +A+ RL+ +Y A + AR+V + ER P+G Sbjct: 382 EGGHWPKAATWFEAYLDEQPKGTHRSDALGRLMASYQAAGKQERARDVAADYLERDPKGA 441 Query: 262 WARYVETLV 270 A L+ Sbjct: 442 HAAKARELL 450 >gi|254785920|ref|YP_003073349.1| hypothetical protein TERTU_1850 [Teredinibacter turnerae T7901] gi|237684470|gb|ACR11734.1| TPR repeat domain protein [Teredinibacter turnerae T7901] Length = 947 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 38/243 (15%), Positives = 68/243 (27%), Gaps = 58/243 (23%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 + A + + + +P + + L A GK +A + E+ +++P N+ Sbjct: 97 YLDAIKSYKEILEKYPNSPDNAEVLYQLAKAYDMEGKQAEALRMLEQLTSRHPYYPNIGE 156 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV---------ERYTNSPYVKGARFYVT 183 Y+ G Y R +Q + + RY Y YV Sbjct: 157 AYFRKGDIYFSAQRYKQAEQAYFAVTQSGAEKFQVNAHYMLGWSRYKQHNYRGSLTSYVY 216 Query: 184 VGRNQ---------LAA----------KEVEIG--------------------------- 197 V +N LA + + Sbjct: 217 VMKNLFGDASDVATLAKPQQSMVKDSLHSMSLALDKLGGAAAIKTVDGLDNAPYVWLLYE 276 Query: 198 ---RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +YL++ Y + F+ + Y +E A +LVE Y A E + Sbjct: 277 TLGDFYLEKELYQESADAFKSYVLEYPRSEKAPNLHKKLVETYEQGGFPTAALEEKATYV 336 Query: 255 ERY 257 Y Sbjct: 337 AAY 339 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 27/58 (46%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 + Y+ AI ++ +L Y ++ E + +L +AY EA ++ + R+P Sbjct: 92 YSKSYYLDAIKSYKEILEKYPNSPDNAEVLYQLAKAYDMEGKQAEALRMLEQLTSRHP 149 >gi|115376815|ref|ZP_01464039.1| Tgl protein [Stigmatella aurantiaca DW4/3-1] gi|115366177|gb|EAU65188.1| Tgl protein [Stigmatella aurantiaca DW4/3-1] Length = 193 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 39/133 (29%), Gaps = 21/133 (15%) Query: 62 EKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++L + + +A + Q +P +A+ + + G +A + Sbjct: 48 NLGNVYLDQGRYDEAIRTYEQVLNDMLYPTPFIAQS---NLGWAYFKKGDTAKALENIKS 104 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR-ATKLMLQYMSRIVERYTNSPYVKGA 178 +T P YDQ T+ + SR E + V A Sbjct: 105 AVTLNPN------------FCRGYQNLGFIYDQTGDTEEACRQFSRYREMCPD---VADA 149 Query: 179 RFYVTVGRNQLAA 191 V + ++ Sbjct: 150 YMREGVCQAKMGK 162 >gi|42528117|ref|NP_973215.1| cyclic nucleotide-binding protein [Treponema denticola ATCC 35405] gi|41819162|gb|AAS13134.1| cyclic nucleotide-binding protein [Treponema denticola ATCC 35405] Length = 333 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 36/86 (41%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y KA ++ F AY+ ++ + + + + +S +Y + L + Sbjct: 211 YNKAEDLFEKGEFEAAYDQYHAVIEAGAGDEITDNAYIGAGKSLHSQKEYVRCLQLLTGF 270 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIR 146 I+Q+P+S + +GM Y M R Sbjct: 271 ISQHPKSSKIGDALMYLGMCYMDMER 296 >gi|313143808|ref|ZP_07806001.1| paralysed flagella protein PflA [Helicobacter cinaedi CCUG 18818] gi|313128839|gb|EFR46456.1| paralysed flagella protein PflA [Helicobacter cinaedi CCUG 18818] Length = 786 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 54/160 (33%), Gaps = 16/160 (10%) Query: 44 RDVYLDSVT---DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 +D+ +D D E Y + N +A + ++ +P + LL Sbjct: 163 KDLDIDRGPLHYDEGEDFEAYNHIKTLINNHNHIEAVKAIDETLIAYPQTIFTKDLLLYR 222 Query: 101 AFV--QYSA-GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + + +G ++I +YP NV V Y +G +YA D + Sbjct: 223 LRALEHFDSVENSDMIVDMGIKWIKKYPTDSNVPEVLYYLGNAYA--------DMKIPNE 274 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 Y R + Y S Y+ + + +N + + Sbjct: 275 AKYYFERTISEYPESRYMP--LSKMALAKNFNTGSDSSVA 312 Score = 42.0 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 18/46 (39%) Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + Y + E + L AY + + +EA+ YP+ + Sbjct: 246 IKKYPTDSNVPEVLYYLGNAYADMKIPNEAKYYFERTISEYPESRY 291 >gi|187735593|ref|YP_001877705.1| type II and III secretion system protein [Akkermansia muciniphila ATCC BAA-835] gi|187425645|gb|ACD04924.1| type II and III secretion system protein [Akkermansia muciniphila ATCC BAA-835] Length = 907 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 33/239 (13%), Positives = 64/239 (26%), Gaps = 44/239 (18%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + S A ++ ++R + ++ + +E + +A + +N Sbjct: 39 ALGSSYAGPGSYQYQSSAARTAMARREAQTQEAMQLLAEGRNLYREGKYKEALDKYNAAY 98 Query: 85 RDFPFAGVARK-----------SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 P A + + + + A G+Y +A L ++ I P S + Sbjct: 99 NMLPSAPINDQRKEAIANHIGDASIAVAQEYIKVGRYDEADKLLQDAIKLNPRSAKLA-- 156 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS-PYVKGAR--FYVTVGRNQLA 190 + + D T L V+ ++ G L Sbjct: 157 ---------KQTLEYMKDPIRTNPALT---------PEHVKNVEKVNTLLHMAYGYYDLG 198 Query: 191 AKEVEIGRYY--LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 + I + L Y A R Q + MA AY A Sbjct: 199 DYDKAIAEFNKVLSIDPYNVAARRGQETVN--------RRRMAYYAAAYDETRSTMLAE 249 >gi|15612260|ref|NP_223913.1| flagellar functional protein [Helicobacter pylori J99] gi|4155785|gb|AAD06761.1| FLAGELLAR FUNCTIONAL PROTEIN [Helicobacter pylori J99] Length = 803 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 188 PLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGKLG 247 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP N+ Y V + + K ++Y RI+ Sbjct: 248 IKKSLLIDIGTQWIKNYPTDPNIPEALYYVAKALDEN--------NNYKQAVRYYKRILL 299 Query: 168 RYTNSPYVKGARFYVTV 184 Y NS Y A+ + + Sbjct: 300 EYKNSRYAPLAQMRLAI 316 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGKLGIKKSLLIDIGTQWIKNYPTDPNIPEALYY 276 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 277 VAKALDENNNYKQAVRYYKRILLEYKNSRYAPLAQMRLA 315 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 16/47 (34%) Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + NY + EA+ + +A +A I Y +A Sbjct: 261 IKNYPTDPNIPEALYYVAKALDENNNYKQAVRYYKRILLEYKNSRYA 307 >gi|212634659|ref|YP_002311184.1| HPr serine phosphorylation site protein [Shewanella piezotolerans WP3] gi|212556143|gb|ACJ28597.1| HPr serine phosphorylation site protein [Shewanella piezotolerans WP3] Length = 240 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 45/128 (35%), Gaps = 14/128 (10%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + + ++ ++ + + ++ +E Y +S Y A +++ Sbjct: 121 ASYEQAVNLVLKEKKYEAAIPAFAQFIESYPDSSYAPNANYWLGQLL------------- 167 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + E+V A F V+ + D+ E++ +L +A+ + + Y Sbjct: 168 -YNKSEFVGATKAFTTVVDKFKDSGKRGESLVKLGMISEKTGDKAKAKAYYQKVVKEYAN 226 Query: 260 GYWARYVE 267 AR + Sbjct: 227 SAAARIAQ 234 >gi|146338274|ref|YP_001203322.1| hypothetical protein BRADO1178 [Bradyrhizobium sp. ORS278] gi|146191080|emb|CAL75085.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278] Length = 349 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 32/133 (24%), Gaps = 22/133 (16%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 Y A + +YP + Y +G S + + + Sbjct: 228 EYDLGIGYMQRRDYALAEQTMRNFTQKYPNDPMIGDAQYWLGESLYRR--------QQYR 279 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + ++ S A + L KE AA F V Sbjct: 280 DAAEIFLTVTTKHDKSSKAADALLRLGQSLAALKEKE--------------AACAAFGEV 325 Query: 217 LANYSDAEHAEEA 229 Y A +A Sbjct: 326 TRKYPRASAGVKA 338 Score = 40.1 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 46/126 (36%), Gaps = 14/126 (11%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 LD+ + R+ Y+ + +++ ++++ A + ++ +P + + Y Sbjct: 216 LDTAPPRQTPRDEYDLGIGYMQRRDYALAEQTMRNFTQKYPNDPMIGDAQYWLGESLYRR 275 Query: 108 GKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 +Y+ A E ++T + +S +G S A + + + Sbjct: 276 QQYRDA---AEIFLTVTTKHDKSSKAADALLRLGQSLAAL--------KEKEAACAAFGE 324 Query: 165 IVERYT 170 + +Y Sbjct: 325 VTRKYP 330 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 22/127 (17%) Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 Y +G+ Y Q R L Q M ++Y N P + A++++ Sbjct: 229 YDLGIGYMQR--------RDYALAEQTMRNFTQKYPNDPMIGDAQYWLGESL-------- 272 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +R +Y A F V + + A +A+ RL ++ AL + A + Sbjct: 273 ------YRRQQYRDAAEIFLTVTTKHDKSSKAADALLRLGQSLAALKEKEAACAAFGEVT 326 Query: 255 ERYPQGY 261 +YP+ Sbjct: 327 RKYPRAS 333 >gi|300869588|ref|ZP_07114169.1| putative Serine/threonine protein kinase with TPR repeats [Oscillatoria sp. PCC 6506] gi|300332456|emb|CBN59369.1| putative Serine/threonine protein kinase with TPR repeats [Oscillatoria sp. PCC 6506] Length = 774 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 61/180 (33%), Gaps = 24/180 (13%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 + + G ++ +Y +E YE+AV K+ + + A + Q + Sbjct: 361 LAGIAGALILAAIIIYFWQRQAPARAKEFYERAVQKAKQGDKAGAIADYTQAIGLN--SR 418 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 A + A Y G YQQA + I P + YY G++Y D Sbjct: 419 DAE-AYYKRANTHYDLGAYQQAIQDYTQAIQVDPNNVK---AYYNRGLAY--------TD 466 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + +Q ++++ N A + L E+ G Y +Y AI Sbjct: 467 IEDRRSAVQDFTQVIRLNPN-----DAEA---YYQRALGYYEL--GDYKTAIEDYTQAIR 516 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 67/223 (30%), Gaps = 42/223 (18%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 D + R Y++A + +A + + Q A + + Sbjct: 408 DYTQAIGLNSRDAEAYYKRANTHYDLGAYQQAIQDYTQ----------AIQVDPNNVKAY 457 Query: 105 YSAG----KYQQAASLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 Y+ G + S +++ I P YY + Y ++ K Sbjct: 458 YNRGLAYTDIEDRRSAVQDFTQVIRLNPND---AEAYYQRALGYYEL--------GDYKT 506 Query: 158 MLQYMSRIVERYTNS--PYVKGARFYVTVGRNQLAAKEV--EI------GRYYLKRGEYV 207 ++ ++ + N Y G Q A + I Y RG Sbjct: 507 AIEDYTQAIRLNPNDAKSYSNRGLARSAAGDKQGAMSDFTQAIELNPKQASVYYSRGRAR 566 Query: 208 AAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEA 246 + ++ + +YS A + +A AY+ LA D+A Sbjct: 567 FNLADYKGAMEDYSQAIVLDPNQADAYTNRCSAYLNLATYDKA 609 >gi|209886400|ref|YP_002290257.1| TPR repeat protein [Oligotropha carboxidovorans OM5] gi|209874596|gb|ACI94392.1| TPR repeat protein [Oligotropha carboxidovorans OM5] Length = 339 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 34/133 (25%), Gaps = 22/133 (16%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + K Y A + T+YP + V Y +G S Q Sbjct: 214 SPKDEFDLGIGYMQRKDYALAEETMRNFTTKYPSDRLVGDAQYWLGESLYQR-------- 265 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + + + + +Y S A + L K+ AA Sbjct: 266 KQYREAAEAFLAVTSKYDKSAKAPDALLRLGESLAALKEKD--------------AACAA 311 Query: 213 FQLVLANYSDAEH 225 F V Y A Sbjct: 312 FGEVARKYPRASS 324 Score = 42.4 bits (99), Expect = 0.076, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 14/110 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 ++ L + M +Y + V A++++ +R +Y A Sbjct: 228 RKDYALAEETMRNFTTKYPSDRLVGDAQYWLGESL--------------YQRKQYREAAE 273 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 F V + Y + A +A+ RL E+ AL D A + +YP+ Sbjct: 274 AFLAVTSKYDKSAKAPDALLRLGESLAALKEKDAACAAFGEVARKYPRAS 323 Score = 39.3 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 13/123 (10%), Positives = 41/123 (33%), Gaps = 14/123 (11%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + ++ ++ + +++ ++++ A E + +P + + Y +Y Sbjct: 209 APPTQSPKDEFDLGIGYMQRKDYALAEETMRNFTTKYPSDRLVGDAQYWLGESLYQRKQY 268 Query: 111 QQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 ++A E ++ Y +S +G S A + + + Sbjct: 269 REA---AEAFLAVTSKYDKSAKAPDALLRLGESLAAL--------KEKDAACAAFGEVAR 317 Query: 168 RYT 170 +Y Sbjct: 318 KYP 320 >gi|156325726|ref|XP_001618580.1| hypothetical protein NEMVEDRAFT_v1g224994 [Nematostella vectensis] gi|156199412|gb|EDO26480.1| predicted protein [Nematostella vectensis] Length = 267 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 52/140 (37%), Gaps = 22/140 (15%) Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 E+++ YP S+ D YY +G +Y + + +++ +++S Sbjct: 36 IEDLEKFVKTYPSSQYTDDAYYELGNTYVNENNET--------KAVATYDKLIANHSSSS 87 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 YV A + Y + A+ +F+ V A + + + EA+A Sbjct: 88 YVAKAILKQGLI--------------YYNNNKTEPALVKFKKVAAEFPGSSESLEAVATA 133 Query: 234 VEAYVALALMDEAREVVSLI 253 YV ++E + V + Sbjct: 134 RLIYVDNGKVEEYSDWVKTL 153 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 53/191 (27%), Gaps = 33/191 (17%) Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 E + + +P + + + +A + ++ I + S V Sbjct: 36 IEDLEKFVKTYPSSQYTDDAYYELGNTYVNENNETKAVATYDKLIANHSSSSYVAKAILK 95 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA--RFYVTVGRN------- 187 G+ Y + T+ L ++ + S A + N Sbjct: 96 QGLIYYNNNK--------TEPALVKFKKVAAEFPGSSESLEAVATARLIYVDNGKVEEYS 147 Query: 188 ----QLAAKEVEIGRY-----------YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 L+ EV YL AI F +A + + HA +A Sbjct: 148 DWVKTLSFIEVSNADLDNTTYESAEKQYLMNNA-KQAISGFSGYIAKFPNGLHALKANFY 206 Query: 233 LVEAYVALALM 243 L + Y A L Sbjct: 207 LAQLYFADKLE 217 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 68/216 (31%), Gaps = 52/216 (24%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + YE ++ E N +KA +++ + + K++L + Y+ K Sbjct: 47 PSSQYTDDAYYELGNTYVNENNETKAVATYDKLIANHSSSSYVAKAILKQGLIYYNNNKT 106 Query: 111 QQAASLGEEYITQYPES---------------------KNVDYVYYLVGMSYAQMIRDVP 149 + A ++ ++P S + D+V +S+ + + + Sbjct: 107 EPALVKFKKVAAEFPGSSESLEAVATARLIYVDNGKVEEYSDWV---KTLSFIE-VSNAD 162 Query: 150 YDQR------------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 D K + S + ++ N + A + Sbjct: 163 LDNTTYESAEKQYLMNNAKQAISGFSGYIAKFPNGLHALKAN--------------FYLA 208 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 + Y ++ + V+ S E E+A+ARL Sbjct: 209 QLYFADKLESNSVKHYDYVVNQ-SRNEFTEQALARL 243 >gi|149369571|ref|ZP_01889423.1| hypothetical protein SCB49_07087 [unidentified eubacterium SCB49] gi|149356998|gb|EDM45553.1| hypothetical protein SCB49_07087 [unidentified eubacterium SCB49] Length = 593 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 46/123 (37%), Gaps = 8/123 (6%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 L+ ++ ++A + + ++LL A + G Y +A ++ I + E Sbjct: 477 ALQNKD-AEAITQLEDIITNHKGESIEDEALLRQANLYKKTGDYLKAELNYKKLIELFNE 535 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 D ++L+ Y +D + + +I+ Y +S + AR + R Sbjct: 536 DILADDAHFLLAKMY-------EFDLAQPEKAKELYEQIIFNYADSIFFTEARLRFRMLR 588 Query: 187 NQL 189 L Sbjct: 589 GDL 591 >gi|39934199|ref|NP_946475.1| hypothetical protein RPA1124 [Rhodopseudomonas palustris CGA009] gi|39648047|emb|CAE26567.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 345 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 13/97 (13%), Positives = 27/97 (27%), Gaps = 8/97 (8%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 Y A + +YP++ Y +G S+ Q + + Sbjct: 224 EFDLGIGYMQRRDYALAEETMRNFAQKYPDNPLTADAQYWLGESFFQR--------QMYR 275 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + + ++ S A + + L KE Sbjct: 276 DAAEAFLAVTSKHEKSGKAPDALLRLGQSLSALKEKE 312 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 14/110 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 +R L + M ++Y ++P A++++ G + +R Y A Sbjct: 234 RRDYALAEETMRNFAQKYPDNPLTADAQYWL--------------GESFFQRQMYRDAAE 279 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 F V + + + A +A+ RL ++ AL + A + I +YPQ Sbjct: 280 AFLAVTSKHEKSGKAPDALLRLGQSLSALKEKEAACAALGEIGRKYPQAS 329 Score = 35.9 bits (82), Expect = 6.7, Method: Composition-based stats. Identities = 15/134 (11%), Positives = 45/134 (33%), Gaps = 15/134 (11%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + R+ ++ + +++ ++++ A E ++ +P + + + Y+ Sbjct: 216 PPSQTPRDEFDLGIGYMQRRDYALAEETMRNFAQKYPDNPLTADAQYWLGESFFQRQMYR 275 Query: 112 QAASLGEEYITQYPESK---NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 A E ++ + + +G S + + + + + I + Sbjct: 276 DA---AEAFLAVTSKHEKSGKAPDALLRLGQSLSAL--------KEKEAACAALGEIGRK 324 Query: 169 YTN-SPYVKGARFY 181 Y S VK A Sbjct: 325 YPQASSSVKKAVDR 338 >gi|325474670|gb|EGC77856.1| cyclic nucleotide-binding protein [Treponema denticola F0402] Length = 333 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 36/86 (41%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y KA ++ F AY+ ++ + + + + +S +Y + L + Sbjct: 211 YNKAEDLFEKGEFEAAYDQYHAVIEAGAGDEITDNAYIGAGKSLHSQKEYVRCLQLLTGF 270 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIR 146 I+Q+P+S + +GM Y M R Sbjct: 271 ISQHPKSSKIGDALMYLGMCYMDMER 296 >gi|291288224|ref|YP_003505040.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus DSM 12809] gi|290885384|gb|ADD69084.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus DSM 12809] Length = 858 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 8/94 (8%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQY-PESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + L + Y ++ AA+ E++ QY P + Y +G +Y +M Q Sbjct: 765 EEVYLDTGISYYKRNNFENAATALEKFKLQYSPRDEKRAEGLYYLGKTYRKM-------Q 817 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + + + ++E S Y AR + + Sbjct: 818 GKDEQAVNALMELLESVPGSVYASAARSELEEIK 851 Score = 42.8 bits (100), Expect = 0.057, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 39/101 (38%), Gaps = 6/101 (5%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + L+ + KY+ A E +I + S ++ VY + +D Y + Sbjct: 424 AELVLIKAFFKQNKYEDADKRVENFIRKNFTSDHLPEVYDIRQQITLTKAKDA-YSKSNY 482 Query: 156 KLMLQYMSRIVERYTNSPYVKGARF-----YVTVGRNQLAA 191 L Q + ++E + ++ + + A R++ AA Sbjct: 483 ALAQQLIEGMLEVFPDTKHKREALEILQDIRFGDIRDRFAA 523 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 48/149 (32%), Gaps = 33/149 (22%) Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA--- 190 + +GM Y +M + +++Y +S K + LA Sbjct: 163 LFRMGMIYFKMGEQSD---DNYIFAARIFDDFLKQYPDSFRKKDVLIKTAEAKE-LAMLY 218 Query: 191 ----------------------AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + E I Y K G+YV AI + V+ N+ + + Sbjct: 219 SEAVFSYNNIIKSLRDRDIRKMSYE-RIAEIYSKSGQYVQAIDAHENVIYNFPETFTIQT 277 Query: 229 AMARLVEAYVALALMDEA-REVVSLIQER 256 A ++ A D A + ++++ + Sbjct: 278 AKIGMLHAKRK--DFDLAYKTFLTVLDHK 304 >gi|224437345|ref|ZP_03658317.1| paralysed flagella protein PflA [Helicobacter cinaedi CCUG 18818] Length = 781 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 54/160 (33%), Gaps = 16/160 (10%) Query: 44 RDVYLDSVT---DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 +D+ +D D E Y + N +A + ++ +P + LL Sbjct: 158 KDLDIDRGPLHYDEGEDFEAYNHIKTLINNHNHIEAVKAIDETLIAYPQTIFTKDLLLYR 217 Query: 101 AFV--QYSA-GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + + +G ++I +YP NV V Y +G +YA D + Sbjct: 218 LRALEHFDSVENSDMIVDMGIKWIKKYPTDSNVPEVLYYLGNAYA--------DMKIPNE 269 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 Y R + Y S Y+ + + +N + + Sbjct: 270 AKYYFERTISEYPESRYMP--LSKMALAKNFNTGSDSSVA 307 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 18/46 (39%) Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + Y + E + L AY + + +EA+ YP+ + Sbjct: 241 IKKYPTDSNVPEVLYYLGNAYADMKIPNEAKYYFERTISEYPESRY 286 >gi|67921401|ref|ZP_00514919.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] gi|67856513|gb|EAM51754.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] Length = 306 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 15/120 (12%), Positives = 37/120 (30%), Gaps = 13/120 (10%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAAS 115 R Y + ++ + N+ +A ++ D ++ A + +A + Sbjct: 138 RAYYNQGLVHFQLGNYQQALNSYDQALEIDQDYSLEHKTLIYHDRALAHLKLEDFSRAIA 197 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + P+++ YY G +Y + K Q + ++ S Sbjct: 198 NLTHLLILNPKNEQ---AYYQRGYAYQKS--------GDHKAAFQDFTEVITLNPQSTNA 246 >gi|328542546|ref|YP_004302655.1| Tol-pal system protein YbgF [polymorphum gilvum SL003B-26A1] gi|326412292|gb|ADZ69355.1| Tol-pal system protein YbgF, putative [Polymorphum gilvum SL003B-26A1] Length = 323 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 33/126 (26%), Gaps = 22/126 (17%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A+ G Y QA +I YP + V Y +G S Q + Sbjct: 203 DRAYSFALNGDYAQAEQAFRIFIDTYPNDRLVSNAQYWLGESLLA--------QGEYRAA 254 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + Y + + + N L + AA + +L Sbjct: 255 ADAFLKTYTDYPGDQKAPDSLLKLGLSLNGLGQTD--------------AACATYSELLT 300 Query: 219 NYSDAE 224 + A Sbjct: 301 KFPGAP 306 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 38/103 (36%), Gaps = 14/103 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q ++ Y N V A++++ + LA GEY AA F Sbjct: 216 QAEQAFRIFIDTYPNDRLVSNAQYWLGE--SLLAQ------------GEYRAAADAFLKT 261 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +Y + A +++ +L + L D A S + ++P Sbjct: 262 YTDYPGDQKAPDSLLKLGLSLNGLGQTDAACATYSELLTKFPG 304 Score = 42.8 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 19/166 (11%), Positives = 48/166 (28%), Gaps = 14/166 (8%) Query: 13 EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72 L + + G + S+ R Y++A F + Sbjct: 154 PLDLSALARGQAVVSPPATGTAPPGVSVGDPIGGQIASLDVTGDARTDYDRAYSFALNGD 213 Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ---YPESKN 129 +++A + F +P + + + G+Y + + ++ YP + Sbjct: 214 YAQAEQAFRIFIDTYPNDRLVSNAQYWLGESLLAQGEY---RAAADAFLKTYTDYPGDQK 270 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 +G+S + T S ++ ++ +P Sbjct: 271 APDSLLKLGLSLNGL--------GQTDAACATYSELLTKFPGAPKA 308 >gi|159112445|ref|XP_001706451.1| Protein F54C1.5 [Giardia lamblia ATCC 50803] gi|157434548|gb|EDO78777.1| Protein F54C1.5 [Giardia lamblia ATCC 50803] Length = 688 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 8/77 (10%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 +++Q + +A E P A SLL AF YSAG Y+ A SL +E ++P S Sbjct: 33 IRDQEWDQAIEILKDQLAQHPGNR-AALSLL--AFCNYSAGNYEDAVSLYQELCQRHPTS 89 Query: 128 KNVDYVYYLVGMSYAQM 144 + Y + ++ A++ Sbjct: 90 ER-----YQLALANARL 101 >gi|91200098|emb|CAJ73141.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 344 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 44/226 (19%), Positives = 72/226 (31%), Gaps = 38/226 (16%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 GW +S+ L D + A+ + K ++A F + P A K+ Sbjct: 121 GWINESTEAFSLAVSLDPTMKEAFRMLALSYTKSGKANEAIANFKKVIELDP--RDA-KA 177 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 LL + Y A + E+Y++ + N VYY +G Y + R Sbjct: 178 LLELGTLYYKNRMADDAIATFEKYVSLDQGNAN---VYYNMGCIYGEKNR--------FD 226 Query: 157 LMLQYMSRIVERYTNS--PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 ++ + N Y IG Y + AI F+ Sbjct: 227 KAVKAYLMALTINPNHVPTY-------------------YNIGVAYNMMERFDEAIEAFK 267 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 VL + +A+ L AY L E+ E+ + E P Sbjct: 268 KVLNLDPE---NHDALYNLGFAYNKSGLYGESLEICKRLTELNPAN 310 >gi|158521774|ref|YP_001529644.1| ABC-type branched-chain amino acid transport systems periplasmic component-like protein [Desulfococcus oleovorans Hxd3] gi|158510600|gb|ABW67567.1| ABC-type branched-chain amino acid transport systems periplasmic component-like protein [Desulfococcus oleovorans Hxd3] Length = 677 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 32/81 (39%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 +++ +A Q++++A + +FP + L A ++ ++ + Sbjct: 33 GPSPGDQLFARAEAAFSRQDYNEALTLYQAYLTEFPGGSHEPDARLRKADIRSRQNRFAE 92 Query: 113 AASLGEEYITQYPESKNVDYV 133 + E I++YP S+ Sbjct: 93 SRDGYESVISRYPASRYEAMA 113 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 50/160 (31%), Gaps = 42/160 (26%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A +S Y +A +L + Y+T++P + D+ Q Sbjct: 44 AEAAFSRQDYNEALTLYQAYLTEFPGGSHEPDARLRKA--------DIRSRQNRFAESRD 95 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI---PRFQL-- 215 ++ RY S Y A + +L++ + I R Sbjct: 96 GYESVISRYPASRYEAMAVIGILES--------------WLRQKAFSTVIEQSGRLDDRT 141 Query: 216 -----VLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 ++ Y A + EAY+++ +A +++ Sbjct: 142 APEPIIVRKY----------ALVGEAYLSMGRPMDAAQIL 171 >gi|87310268|ref|ZP_01092399.1| hypothetical protein DSM3645_27608 [Blastopirellula marina DSM 3645] gi|87287017|gb|EAQ78920.1| hypothetical protein DSM3645_27608 [Blastopirellula marina DSM 3645] Length = 428 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 65/175 (37%), Gaps = 29/175 (16%) Query: 103 VQYSAGKYQQAASLGEEYITQY---PESK--NVDYVYYLVGMSYAQM--IRDVPYDQRAT 155 + +Y +A + ++ I Y P S ++ + Y G + ++ R D RA+ Sbjct: 253 CHFELKEYAKAIADFDDAIKSYQSLPNSPPSSIAFALYQRGTCHFELGDYRSAIRDARAS 312 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFY------VTVGRNQLAA--KEVEIGRYYLKRGEYV 207 L+ + + +Y + A V+ ++ A + + Y +RG+Y Sbjct: 313 -QCLETKNLSIFQYP---LIYQAMLRQGDIKLVSEIIDKPADMVSDPQTALY--ERGKYF 366 Query: 208 AAIPRFQLVLANY-----SDA-EHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 RF ++ D+ HA E LV Y D A + L+ E+ Sbjct: 367 LESDRFAEAEKDFLALATPDSGSHAPE--QYLVTIYQKQGKADLAEKYAKLVAEK 419 >gi|302338568|ref|YP_003803774.1| hypotheticalprotein [Spirochaeta smaragdinae DSM 11293] gi|301635753|gb|ADK81180.1| TPR repeat-containing protein [Spirochaeta smaragdinae DSM 11293] Length = 227 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 17/123 (13%), Positives = 47/123 (38%), Gaps = 9/123 (7%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 L ++ + A + F + ++++P + +A +L+ A AG ++A + ++ Sbjct: 110 GNLAFEKSQWDDAQKDFAELAKEYPKSYLAPVALMNQATALEEAGNNKEAVEIYQKVFDT 169 Query: 124 YP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 Y S + + + Y + + L + + + +S + K +R + Sbjct: 170 YKETSPDAPRALFSIARLYETTGQK--------EAALDAYREVADSFPDSDWTKLSRDRI 221 Query: 183 TVG 185 Sbjct: 222 IYL 224 Score = 42.4 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 34/109 (31%), Gaps = 15/109 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + + + Y S A NQ A E + G A+ +Q V Sbjct: 121 DAQKDFAELAKEYPKSYLAPVA------LMNQATALE--------EAGNNKEAVEIYQKV 166 Query: 217 LANYSDA-EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 Y + A A+ + Y + A + + + +P W + Sbjct: 167 FDTYKETSPDAPRALFSIARLYETTGQKEAALDAYREVADSFPDSDWTK 215 Score = 35.5 bits (81), Expect = 8.9, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 31/84 (36%), Gaps = 1/84 (1%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF-PFAGVARKSLLMSAFV 103 ++ + + +A + N +A E + + + + A ++L A + Sbjct: 128 ELAKEYPKSYLAPVALMNQATALEEAGNNKEAVEIYQKVFDTYKETSPDAPRALFSIARL 187 Query: 104 QYSAGKYQQAASLGEEYITQYPES 127 + G+ + A E +P+S Sbjct: 188 YETTGQKEAALDAYREVADSFPDS 211 >gi|294664115|ref|ZP_06729508.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292606115|gb|EFF49373.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 609 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 38/111 (34%), Gaps = 9/111 (8%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 ++ + C L + ++ D L D Q+ + + V ++ +F+ A + Sbjct: 324 FRRRAVVAVLATACVLPLAQPANAADGTLWQRADQVQQQRL-DAGVQAYRKGDFAAAQKA 382 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 F + L G+Y A + + + Q+P ++ Sbjct: 383 FEAVP--------TDEGLYNLGNALARQGQYDAAIAAYDRALKQHPNQQDA 425 >gi|117618152|ref|YP_858092.1| TPR domain-containing protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559559|gb|ABK36507.1| TPR domain protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 270 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 40/124 (32%), Gaps = 22/124 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y +A E +I QYP S V +Y +G + + Sbjct: 162 KEKNYDKAIPAFEGFIKQYPSSSYVPNAHYWLGQLLFNKGDRTG--------AAAQFTTV 213 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 +++ SP A + + QL K+ E +Y + V+ Y + Sbjct: 214 ATKFSKSPKRADALLKLGML-AQLDGKKAEAKNFY-------------EQVIKGYPNTSP 259 Query: 226 AEEA 229 A+ A Sbjct: 260 AQLA 263 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 50/130 (38%), Gaps = 9/130 (6%) Query: 57 QREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + + Y+ AV LKE+N+ KA F + +P + + + ++ G AA+ Sbjct: 149 ENQAYDAAVNMVLKEKNYDKAIPAFEGFIKQYPSSSYVPNAHYWLGQLLFNKGDRTGAAA 208 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 T++ +S +GM D + + ++++ Y N+ Sbjct: 209 QFTTVATKFSKSPKRADALLKLGM-------LAQLDGKKA-EAKNFYEQVIKGYPNTSPA 260 Query: 176 KGARFYVTVG 185 + A+ ++ Sbjct: 261 QLAKQSLSKL 270 >gi|254447964|ref|ZP_05061428.1| tetratricopeptide repeat domain protein [gamma proteobacterium HTCC5015] gi|198262390|gb|EDY86671.1| tetratricopeptide repeat domain protein [gamma proteobacterium HTCC5015] Length = 197 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 42/151 (27%), Gaps = 16/151 (10%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 I +V L S +D + Y A+ L+ +++ +A + + Sbjct: 11 LIALLASVSILASCGGSDSVKARVD--HQSMTPDQAYVYALEMLQAEDYEQALPLLQRAN 68 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A + Q G+Y++A + + P + ++ Sbjct: 69 EK--VGRSAE-VIANLGVAQAELGEYEKALENLKRALGMSPGNLDI-----------VNQ 114 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 I Q Q + + + S Sbjct: 115 IAVTYRMQGEFDKAKQLYEKQIATHPQSARA 145 >gi|66810924|ref|XP_639169.1| hypothetical protein DDB_G0283157 [Dictyostelium discoideum AX4] gi|60467802|gb|EAL65817.1| hypothetical protein DDB_G0283157 [Dictyostelium discoideum AX4] Length = 514 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 51/159 (32%), Gaps = 28/159 (17%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSL 97 + + + L ++ E A EQ + A E + + + P A + +S Sbjct: 34 DDKETDPSTLSKEECIKKSDEYKAIANKHFSEQKYDLAAEVYTKAIKYHPTAILYSNRS- 92 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD--Y--VYYLVGMSYAQMIRDVPYDQR 153 F + Y A + S +D Y YY +G ++ + R Sbjct: 93 ----FSNFKNELYVNALQDAQ-------TSHEMDPTYIKAYYRLGSAHLAL--------R 133 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 + + ++ + A+ + + N + AK Sbjct: 134 NFEEAKHFFKELLTKNPK---ENDAKIKLNLCNNLIKAK 169 >gi|116748479|ref|YP_845166.1| extracellular ligand-binding receptor [Syntrophobacter fumaroxidans MPOB] gi|116697543|gb|ABK16731.1| Extracellular ligand-binding receptor [Syntrophobacter fumaroxidans MPOB] Length = 643 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 41/116 (35%), Gaps = 5/116 (4%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDS-----VTDVRYQREVYEKAVLFLKE 70 ++ +++ + + V FL G S T ++ ++A K Sbjct: 1 MKRISRYSRILLLVVTVAFLAGCPGSQQPAEQAPSRPSLTGTTPPDAEKMVQQAEQARKS 60 Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 N KA + + + +P VA + + + + G+ +A + + YP Sbjct: 61 GNIPKAISLWEKVIQKYPGHAVAARGFSVVGNLYLAQGQPDRALQYFDYLLYTYPN 116 >gi|269302452|gb|ACZ32552.1| tetratricopeptide repeat protein [Chlamydophila pneumoniae LPCoLN] Length = 318 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 53/150 (35%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A +++ FP + ++L A + +A ++ Q+P Sbjct: 151 EDALRIYDEILTAFPSKDLGAQALYSKAALLIVKNDLTEAIKTLKKLTLQFPLHILSSEA 210 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + + Y Q + P++ + + +++ N P + V R A Sbjct: 211 FVRLSEIYLQQAKKEPHNLQYLHFAKLNEEAMKKQHPNHPLNEVVSANVGAMREHYARGL 270 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 GR+Y K+ + AA ++ + NY D Sbjct: 271 YATGRFYEKKKKAEAANIYYRTAITNYPDT 300 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 72/228 (31%), Gaps = 45/228 (19%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 E + + FLK+ NF KA F + FP + ++ + + A Sbjct: 42 SAEEYFSQGQEFLKKGNFRKALLCFGIITHHFPKDILRNQAQYLIGVCYFKQDHPDLADK 101 Query: 116 LGEEYITQYPESKNVDY------VYYLVGMSYAQ-------MIRDVPYDQRATKLMLQYM 162 Y+ + +Y + Y + +AQ + P A + L+ Sbjct: 102 AFASYLQL----PDAEYSEELFQMKYAIAQRFAQGKRKRICRLEGFPKLMNADEDALRIY 157 Query: 163 SRIVERYTNSPYVKGA---RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 I+ + + A + + + +N L AI + + Sbjct: 158 DEILTAFPSKDLGAQALYSKAALLIVKNDLTE-----------------AIKTLKKLTLQ 200 Query: 220 YSDAEHAEEAMARLVEAYVA--------LALMDEAREVVSLIQERYPQ 259 + + EA RL E Y+ L + A+ +++++P Sbjct: 201 FPLHILSSEAFVRLSEIYLQQAKKEPHNLQYLHFAKLNEEAMKKQHPN 248 >gi|283852861|ref|ZP_06370123.1| tol-pal system protein YbgF [Desulfovibrio sp. FW1012B] gi|283571771|gb|EFC19769.1| tol-pal system protein YbgF [Desulfovibrio sp. FW1012B] Length = 403 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 42/132 (31%), Gaps = 8/132 (6%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 ++ Y +A+ N + A F+Q P + + +L ++ G YQ A Sbjct: 278 SPAEKAEYNRALQMAINGNTAGAKAAFDQFLAAHPRSPLTPNALYWVGEGAFAGGDYQTA 337 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 S ++ +P Y + M+ + + R ++ Y ++ Sbjct: 338 ISDFDKVAKGWPGHHKAADALYKMAMAQEKA--------GDAAAARASLERYLKDYPSAE 389 Query: 174 YVKGARFYVTVG 185 R + Sbjct: 390 LAGIVRQKLQAL 401 Score = 43.2 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 28/78 (35%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +Y ++ A F++ ++ +P A +L A Q AG Sbjct: 312 PRSPLTPNALYWVGEGAFAGGDYQTAISDFDKVAKGWPGHHKAADALYKMAMAQEKAGDA 371 Query: 111 QQAASLGEEYITQYPESK 128 A + E Y+ YP ++ Sbjct: 372 AAARASLERYLKDYPSAE 389 >gi|167950636|ref|ZP_02537710.1| hypothetical protein Epers_31176 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 191 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 27/85 (31%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + S + + D + + Y++A LK+ + + + F + FP Sbjct: 83 AATSADAAQSGEAGAQTPPDPKLEAAAYQRAFNLLKQGRYPDSIKAFRDFLQQFPGGSYG 142 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGE 118 + Y + + A + Sbjct: 143 DNAQYWLGEASYVSRDFDAAIERVQ 167 >gi|222053775|ref|YP_002536137.1| hypothetical protein [Geobacter sp. FRC-32] gi|221563064|gb|ACM19036.1| TPR repeat-containing protein [Geobacter sp. FRC-32] Length = 391 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 84/241 (34%), Gaps = 47/241 (19%) Query: 39 ERQSSRDVYLDSVTDVRYQREV---Y--EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + S+ D + D++ QR++ Y A+ L++ + +A + P + A Sbjct: 2 DSMSNADKLFAAFGDIQSQRQLTANYAMNGALQALQDGKYDRAASQLKRVLALTPDSTNA 61 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV--DYVYYLVGMSYAQMIRDVPYD 151 K L M GK A + + + P S + D +G +Y + R Sbjct: 62 YKYLGM---AYSGMGKSNDAIAAYKNAVRLEPGSSSAHKD-----LGNAYLEAKRYP--- 110 Query: 152 QRATKLMLQYMSRIVERYTNSPYVK----------------GARFYVTVGRNQLAAKEVE 195 + + S Y A+F + ++ A Sbjct: 111 -----EAEKEFQATARIDSTSTYAPYTLGFLYLNTGREQEAEAQFKKVIAIDRRDAHGYY 165 Query: 196 -IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR--LVEAYVALALMDEAREVVSL 252 +G Y K G+Y AI + Q+ + D A+A L +AY A D+A+E V Sbjct: 166 GLGMAYSKMGKYDEAIEQLQMAVKIDKDF-----ALAHSELGKAYAATTQKDKAQEEVET 220 Query: 253 I 253 + Sbjct: 221 L 221 >gi|73670356|ref|YP_306371.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri str. Fusaro] gi|72397518|gb|AAZ71791.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri str. Fusaro] Length = 397 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 62/201 (30%), Gaps = 35/201 (17%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 Y Y KA+ + ++ A E + + + + + + GKY +A Sbjct: 150 DYPNAWYGKALNLSQAGDYKAAIEAYEKVLEEN--SDYKE-AWVGKGIALGQMGKYDEAI 206 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 ++ I N ++ G+ + + + L+ + VE + Sbjct: 207 IAYDKAIEL---DPNFAEAWHYKGVDMDSL--------GSYRQALKAYQKTVELDPEN-- 253 Query: 175 VKGARFYVTVGRNQLAAKEVEI-------------GRYYLKRGEYVAAIPRFQLVLANYS 221 A + + L + I + +G ++ + RF+ Y Sbjct: 254 -DDAWNNMGIDLENLEKYDEAIKAFDKAIEINSENADVWYNKGFTLSQMQRFEEAAETYR 312 Query: 222 D-AEHAEEAMARLVEAYVALA 241 + E + EAY +L Sbjct: 313 KATQLDPEYL----EAYSSLG 329 >gi|260554250|ref|ZP_05826503.1| conserved hypothetical protein [Acinetobacter sp. RUH2624] gi|260404630|gb|EEW98147.1| conserved hypothetical protein [Acinetobacter sp. RUH2624] Length = 294 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 17/120 (14%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209 Q K + M ++ + NS Y A F++ ++L Y A Sbjct: 189 QGGAKKAIAPMQNFIKNHPNSIYTGNAYFWL--------------AEFHLATDPVNYNEA 234 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + +V + Y ++ A A+ +L A A + + + +YP+ A++ + Sbjct: 235 KKNYNIVASQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKNKLLTQYPKSEEAKFFKK 294 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 42/122 (34%), Gaps = 9/122 (7%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAA 114 ++ Y A+ K+ KA ++ P + + A + Y +A Sbjct: 176 EKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSIYTGNAYFWLAEFHLATDPVNYNEAK 235 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 +QYP S Y + + +DV + T QY ++++ +Y S Sbjct: 236 KNYNIVASQYPNSSKAPRALYQL----YSIAKDVD---KNTVSANQYKNKLLTQYPKSEE 288 Query: 175 VK 176 K Sbjct: 289 AK 290 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 8/79 (10%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163 Y G ++A + + +I +P S G +Y + + D + + Sbjct: 187 YKQGGAKKAIAPMQNFIKNHPNSIYT-------GNAYFWLAEFHLATDPVNYNEAKKNYN 239 Query: 164 RIVERYTNSPYVKGARFYV 182 + +Y NS A + + Sbjct: 240 IVASQYPNSSKAPRALYQL 258 >gi|217969211|ref|YP_002354445.1| tol-pal system protein YbgF [Thauera sp. MZ1T] gi|217506538|gb|ACK53549.1| tol-pal system protein YbgF [Thauera sp. MZ1T] Length = 265 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 40/122 (32%), Gaps = 8/122 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A+ LK A F + +P + + A A + Sbjct: 149 YQGALALLKNGKHKDAQTAFERFITRYPAGNFTAGAHFWAGNAALQARDVASANRHFKTV 208 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +YP+ ++G++ +Q + + +VERY S + AR Sbjct: 209 MDKYPKENVAPDA--MLGLANSQQA------MNDAAGAKRTLQSLVERYPQSNAAQVARQ 260 Query: 181 YV 182 + Sbjct: 261 RL 262 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 39/107 (36%), Gaps = 16/107 (14%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR-FQ 214 K R + RY + A + G L A++ VA+ R F+ Sbjct: 162 KDAQTAFERFITRYPAGNFT--AGAHFWAGNAALQARD-------------VASANRHFK 206 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 V+ Y A +AM L + A+ A+ + + ERYPQ Sbjct: 207 TVMDKYPKENVAPDAMLGLANSQQAMNDAAGAKRTLQSLVERYPQSN 253 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 24/134 (17%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A GK++ A + E +IT+YP ++ G + Q R + Sbjct: 152 ALALLKNGKHKDAQTAFERFITRYPAGNFTAGAHFWAGNAALQA--------RDVASANR 203 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR-FQLVLAN 219 + ++++Y A + + +Q A + A R Q ++ Sbjct: 204 HFKTVMDKYPKENVAPDA--MLGLANSQQAMND-------------AAGAKRTLQSLVER 248 Query: 220 YSDAEHAEEAMARL 233 Y + A+ A RL Sbjct: 249 YPQSNAAQVARQRL 262 >gi|260827198|ref|XP_002608552.1| hypothetical protein BRAFLDRAFT_236015 [Branchiostoma floridae] gi|229293903|gb|EEN64562.1| hypothetical protein BRAFLDRAFT_236015 [Branchiostoma floridae] Length = 1183 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 77/232 (33%), Gaps = 58/232 (25%) Query: 73 FSKAYEYFNQCSRDFPF--------AGVAR-KSLLMSAFVQYS-----AGKYQQAASLG- 117 + A + + R+ P +AR + + A + + A SL Sbjct: 518 YQDAERLYKEVLREHPNYVDCYLRLGCMARDRGQIYEASDWFKEALQINQDHPDAWSLIG 577 Query: 118 -------------EEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLM 158 +++ +P++ + Y +G + Q + D+ R Sbjct: 578 NLHLAKQEWGPGQKKFERILKHPDTASDAYSMLALGNVWLQTLHQPQRDKEKEKRHQDRA 637 Query: 159 LQYMSRIVERYTNSPYVKG------ARFY-VTVGRNQLAA-KE---------VEIGRYYL 201 L +++ + Y A+ + R+ A +E + + Y+ Sbjct: 638 LAMYKQVLRNDPKNLYAANGIGAVLAQKNCIREARDVFAQVREATADMRDVWLNLAHIYV 697 Query: 202 KRGEYVAAIPRFQLVLANY---SDAEHAEEAMARLVEAYVALALMDEAREVV 250 ++ +YV+AI ++ L + D + + L AY L E R+++ Sbjct: 698 EQRQYVSAIQMYENCLKKFYKCQDT----DVLLYLARAYYKLGKHKECRQIL 745 >gi|332297631|ref|YP_004439553.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema brennaborense DSM 12168] gi|332180734|gb|AEE16422.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema brennaborense DSM 12168] Length = 706 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 40/231 (17%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE-YF 80 +A I +AVC L V + + R + +++ Q++ A E Y+ Sbjct: 9 YATGIRIRLAVCCLAACLVS----VPVSAAAPARTSKYYFDQGQKLQSAQDWYGAVESYY 64 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + + + A Y G+Y A + E Y + L G Sbjct: 65 EAVRLNPAYGA----AWFSLAECNYEMGEYSLALTYLES-AGTYSG--KTAQILNLTGFC 117 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 Y + +A + +++ Y N + + + +L+ E Sbjct: 118 YLGL--------QAYGDAERTFKQVLASYPNDIDARFGLAQLDILEGRLSGAE------- 162 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 Y+ A+ R + A+ L + +A + Sbjct: 163 ---QLYLDALKR--------QTSN--RRALLSLSLVSAEMGKTADAERYIE 200 >gi|319786287|ref|YP_004145762.1| tol-pal system protein YbgF [Pseudoxanthomonas suwonensis 11-1] gi|317464799|gb|ADV26531.1| tol-pal system protein YbgF [Pseudoxanthomonas suwonensis 11-1] Length = 268 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 8/125 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A LK +++ + E F +P A +L Y+ G Y AA Sbjct: 146 YDAAFKTLKAADYAASAEAFQGFLDAYPAGVYAPNALYWLGESYYATGNYALAAQQFRAL 205 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +YP +G+S + + L ++++ +Y + + A Sbjct: 206 MERYPTHDKTPGALLKLGLS--------QLGEGEVRQALSTLAQVGSQYPGTDAARIAAD 257 Query: 181 YVTVG 185 + Sbjct: 258 RLRSI 262 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 39/110 (35%), Gaps = 14/110 (12%) Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 ++ Y Y A +++ G Y G Y A +F+ ++ Y Sbjct: 165 FQGFLDAYPAGVYAPNALYWL--------------GESYYATGNYALAAQQFRALMERYP 210 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + A+ +L + + + +A ++ + +YP AR ++ Sbjct: 211 THDKTPGALLKLGLSQLGEGEVRQALSTLAQVGSQYPGTDAARIAADRLR 260 Score = 40.1 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 27/76 (35%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 V +Y + N++ A + F +P +LL Q G+ Sbjct: 173 PAGVYAPNALYWLGESYYATGNYALAAQQFRALMERYPTHDKTPGALLKLGLSQLGEGEV 232 Query: 111 QQAASLGEEYITQYPE 126 +QA S + +QYP Sbjct: 233 RQALSTLAQVGSQYPG 248 >gi|156743163|ref|YP_001433292.1| hypothetical protein Rcas_3220 [Roseiflexus castenholzii DSM 13941] gi|156234491|gb|ABU59274.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus castenholzii DSM 13941] Length = 1178 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 64/220 (29%), Gaps = 25/220 (11%) Query: 64 AVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 ++ + A + F +L A Q+ AG+ +A Sbjct: 965 GEARVRVGDVDDAISAYQQALQLRSAFPE----ALFGLAQAQFGAGRIDEALRNVNR--A 1018 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK--GARF 180 S+ + + L+G Y Q A K + R+ E + Sbjct: 1019 LEQRSRYAE-AFLLLGKIYEQQ-GYSTRALDAYKQAVDANPRLAE--PHFRRALLLIRAD 1074 Query: 181 YVTVGRNQL----------AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 ++ R+ L A +GR Y + + AA+ RF+ + + EA Sbjct: 1075 RLSEARDDLEIAARLEPNFAEAHYWLGRVYFAQRNFQAAVNRFREAVNR--RNGNYPEAR 1132 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 A L ++ A + + WA + Sbjct: 1133 YYQGRAEEQLGDLNAAIRSFDTVANQNDDALWANEARAAL 1172 >gi|332534219|ref|ZP_08410064.1| TPR repeat containing exported protein [Pseudoalteromonas haloplanktis ANT/505] gi|332036299|gb|EGI72770.1| TPR repeat containing exported protein [Pseudoalteromonas haloplanktis ANT/505] Length = 231 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 49/141 (34%), Gaps = 23/141 (16%) Query: 50 SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 S + + E YE+AV +K++ + +A F +P + A Y G Sbjct: 104 SYSSDLSENEAYERAVALIMKDKRYDQAIPEFQTFLTTYPNSVYASN-------AHYWLG 156 Query: 109 KY----QQAASLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + E + + ++P S +G + DQ + + Sbjct: 157 QLLTIKNDGVKAVEHFKVVVNEFPNSNKRPDAMLKLG--------TLLQDQGSAAQAQKI 208 Query: 162 MSRIVERYTNSPYVKGARFYV 182 +S ++ +Y ++ K A + Sbjct: 209 LSDLINQYPSTTAAKLATDRL 229 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 45/130 (34%), Gaps = 21/130 (16%) Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 Y ++ + + + Y NS Y A +++ Sbjct: 115 YERAVALIMKDKRYD-------QAIPEFQTFLTTYPNSVYASNAHYWLGQLLTI------ 161 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 + + V A+ F++V+ + ++ +AM +L +A++++S + Sbjct: 162 --------KNDGVKAVEHFKVVVNEFPNSNKRPDAMLKLGTLLQDQGSAAQAQKILSDLI 213 Query: 255 ERYPQGYWAR 264 +YP A+ Sbjct: 214 NQYPSTTAAK 223 >gi|258593153|emb|CBE69465.1| protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 739 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 38/119 (31%), Gaps = 18/119 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAG----VARKSLLMSAFVQYSAGKYQQAASLGEE 119 + + +++ A + P + ++L +QA Sbjct: 273 GISHFQRRDYRLAISLLS------PMGQDRSLYSAEALYWIGRSYARVDDREQAVMAWTR 326 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 I YP S YL+ + + D K +Q + R++ Y +S ++ A Sbjct: 327 LIDIYPNSPFTAESLYLMALQHI--------DNSQPKRAIQTLDRLIRNYQSSRFIDAA 377 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 39/113 (34%), Gaps = 8/113 (7%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 +Y + + + +A + + +P + +SL + A + ++A Sbjct: 300 SAEALYWIGRSYARVDDREQAVMAWTRLIDIYPNSPFTAESLYLMALQHIDNSQPKRAIQ 359 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + I Y S+ +D + + + Q A K L + R+ R Sbjct: 360 TLDRLIRNYQSSRFIDAALWARAWIHYR--------QSALKRALADLQRLQAR 404 Score = 42.8 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 62/186 (33%), Gaps = 40/186 (21%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFA----GVARKSLLMSAFVQYSAGK 109 E +E+A+ + +S A F PF ++ L S + Sbjct: 222 TADEQFERALSLYRSSQYSLAITAFAPFLDEGSRPFDGGQDRFTSRARLWSGISHFQRRD 281 Query: 110 YQQAASLG-----EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y+ A SL + + Y Y +G SYA++ + + +R Sbjct: 282 YRLAISLLSPMGQDR--SLY-----SAEALYWIGRSYARVDDR--------EQAVMAWTR 326 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +++ Y NSP+ + + + + + + AI ++ NY + Sbjct: 327 LIDIYPNSPFTAESLYLMAL------QH--------IDNSQPKRAIQTLDRLIRNYQSSR 372 Query: 225 HAEEAM 230 + A+ Sbjct: 373 FIDAAL 378 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 28/76 (36%), Gaps = 6/76 (7%) Query: 196 IGRYYLK---RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 IGR Y + R + V A R ++ Y ++ E++ + ++ + A + + Sbjct: 307 IGRSYARVDDREQAVMAWTR---LIDIYPNSPFTAESLYLMALQHIDNSQPKRAIQTLDR 363 Query: 253 IQERYPQGYWARYVET 268 + Y + Sbjct: 364 LIRNYQSSRFIDAALW 379 >gi|260774143|ref|ZP_05883058.1| TPR domain protein in aerotolerance operon [Vibrio metschnikovii CIP 69.14] gi|260611104|gb|EEX36308.1| TPR domain protein in aerotolerance operon [Vibrio metschnikovii CIP 69.14] Length = 616 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 13/113 (11%), Positives = 37/113 (32%), Gaps = 10/113 (8%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK----AVLFLKEQNFSKAY 77 L+ +++ W Q+ + + D + ++ + V + ++ A Sbjct: 328 LTLSSGLTVSPAHASAWLNQNQQALRAYQQGDYQTAARLFSQPEWQGVARYQAGDYQGAI 387 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + +Q P + + A AG+ +A + + P+ + Sbjct: 388 DVLSQIKN--P----SEQVQYNLANAFAQAGELTEALQRYQHILANNPQHADA 434 >gi|242279478|ref|YP_002991607.1| tol-pal system protein YbgF [Desulfovibrio salexigens DSM 2638] gi|242122372|gb|ACS80068.1| tol-pal system protein YbgF [Desulfovibrio salexigens DSM 2638] Length = 307 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 53/147 (36%), Gaps = 24/147 (16%) Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 P Y G++ + +R K ++ M+ ++ + V A F+ Sbjct: 182 PADP--AQALYDKGLALFK--------ERKYKDSIRDMAEFIKTFPKHKLVPNAIFWEGE 231 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 Y + +Y A ++Q V+A +S + A+ + + L Sbjct: 232 C--------------YYQLKDYANAALKYQGVIAKHSKSNKYRPALLKQGLCLIKLGKTK 277 Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271 R ++ + ++ P A+ ++++K Sbjct: 278 SGRYILEDLIKKAPDSAEAKRAQSIIK 304 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 47/140 (33%), Gaps = 8/140 (5%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 + + +Y+K + KE+ + + + + FP + ++ Y Sbjct: 176 EVKKTEPADPAQALYDKGLALFKERKYKDSIRDMAEFIKTFPKHKLVPNAIFWEGECYYQ 235 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y AA + I ++ +S G+ ++ TK + ++ Sbjct: 236 LKDYANAALKYQGVIAKHSKSNKYRPALLKQGLCLIKL--------GKTKSGRYILEDLI 287 Query: 167 ERYTNSPYVKGARFYVTVGR 186 ++ +S K A+ + + Sbjct: 288 KKAPDSAEAKRAQSIIKNLK 307 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 49/129 (37%), Gaps = 14/129 (10%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 ++L + KY+ + E+I +P+ K V + G Y Q+ Sbjct: 187 QALYDKGLALFKERKYKDSIRDMAEFIKTFPKHKLVPNAIFWEGECYYQLKD-------Y 239 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK---RGEYVAA-I 210 L+Y ++ +++ S + A + +L + GRY L+ + +A Sbjct: 240 ANAALKY-QGVIAKHSKSNKYRPALLKQGLCLIKLGKT--KSGRYILEDLIKKAPDSAEA 296 Query: 211 PRFQLVLAN 219 R Q ++ N Sbjct: 297 KRAQSIIKN 305 >gi|192289725|ref|YP_001990330.1| tol-pal system protein YbgF [Rhodopseudomonas palustris TIE-1] gi|192283474|gb|ACE99854.1| tol-pal system protein YbgF [Rhodopseudomonas palustris TIE-1] Length = 345 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 13/97 (13%), Positives = 27/97 (27%), Gaps = 8/97 (8%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 Y A + +YP++ Y +G S+ Q + + Sbjct: 224 EFDLGIGYMQRRDYALAEETMRNFAQKYPDNPLTADAQYWLGESFFQR--------QMYR 275 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + + ++ S A + + L KE Sbjct: 276 DAAEAFLAVTSKHEKSGKAPDALLRLGQSLSALKEKE 312 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 14/110 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 +R L + M ++Y ++P A++++ G + +R Y A Sbjct: 234 RRDYALAEETMRNFAQKYPDNPLTADAQYWL--------------GESFFQRQMYRDAAE 279 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 F V + + + A +A+ RL ++ AL + A + I +YPQ Sbjct: 280 AFLAVTSKHEKSGKAPDALLRLGQSLSALKEKEAACAALGEIGRKYPQAS 329 Score = 35.5 bits (81), Expect = 8.0, Method: Composition-based stats. Identities = 15/134 (11%), Positives = 45/134 (33%), Gaps = 15/134 (11%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + R+ ++ + +++ ++++ A E ++ +P + + + Y+ Sbjct: 216 PPSQTPRDEFDLGIGYMQRRDYALAEETMRNFAQKYPDNPLTADAQYWLGESFFQRQMYR 275 Query: 112 QAASLGEEYITQYPESK---NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 A E ++ + + +G S + + + + + I + Sbjct: 276 DA---AEAFLAVTSKHEKSGKAPDALLRLGQSLSAL--------KEKEAACAALGEIGRK 324 Query: 169 YTN-SPYVKGARFY 181 Y S VK A Sbjct: 325 YPQASSSVKKAVDR 338 >gi|163753728|ref|ZP_02160851.1| hypothetical protein KAOT1_18937 [Kordia algicida OT-1] gi|161325942|gb|EDP97268.1| hypothetical protein KAOT1_18937 [Kordia algicida OT-1] Length = 603 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 59/161 (36%), Gaps = 9/161 (5%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSR 85 +V L+ + + + D+ + Q + Y KA L ++ ++A + Sbjct: 445 LKSSVSQLIANDALQLKLIISDNSLEDSTQTALKKYAKADLLKYQKKETEAIATLEDILQ 504 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 + + ++LLM A + G+Y +A ++ I + + VD Y+ + Y Sbjct: 505 NHKGEKIEDEALLMQAKLYEKRGEYDKARLNYKKIIEFFKDDILVDDAYFAMAQLYLHQF 564 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 D + + I+ + +S + A+ R Sbjct: 565 DDP-------EKAKDFFEEIIFNHQDSIHYVEAQKAYRKLR 598 >gi|218674236|ref|ZP_03523905.1| hypothetical protein RetlG_23392 [Rhizobium etli GR56] Length = 329 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 47/142 (33%), Gaps = 14/142 (9%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 + + + + + Y+ A + ++ A + FNQ +P + Sbjct: 181 ASIGSGPIPDANGRTPQQTASLGSEADQYKAAYGHVLSGDYGTAEQEFNQYIARYPSSAR 240 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP---ESKNVDYVYYLVGMSYAQMIRDVP 149 A + YS GKY +A + ++ + S+ + +GMS A + Sbjct: 241 AADANFWLGEALYSQGKYNEA---AKTFLNAHQKYGGSEKAPEMLLKLGMSLAALDNK-- 295 Query: 150 YDQRATKLMLQYMSRIVERYTN 171 + + + +RY Sbjct: 296 ------ETACATLREVSKRYPK 311 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 Q ++ + RY +S A F++ +G+Y A F Sbjct: 224 AEQEFNQYIARYPSSARAADANFWLGEAL--------------YSQGKYNEAAKTFLNAH 269 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y +E A E + +L + AL + A + + +RYP+ Sbjct: 270 QKYGGSEKAPEMLLKLGMSLAALDNKETACATLREVSKRYPKAS 313 >gi|221509347|gb|EEE34916.1| TPR domain-containing protein, putative [Toxoplasma gondii VEG] Length = 823 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 60/195 (30%), Gaps = 51/195 (26%) Query: 37 GWERQSSRDVYL---DSVTDVRYQREVYEKAVLFLKEQNFSKAY----EYFNQCSRDFPF 89 G S++ + + + ++ +E+N+ A + Q FP Sbjct: 111 GCSHDHSKERQIYEKPTGEKIDAAERFRQEGNAAFREKNYGLAAVNYRKALLQFDYTFPD 170 Query: 90 AGVARKSL--------LMSAFVQYSAGKYQQAASLGEEYIT------QYPESKNVDYVYY 135 +K + L A + Y++ YI P++ YY Sbjct: 171 TDEEQKRMDSVKLPCHLNLAACKLQQQDYEEV------YIQCRLALEMDPKNTK---AYY 221 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 G+++ Q V + + + + NS ++ A + + R ++ Sbjct: 222 RRGLAHLQQDNFV--------KAKEDLMEALTQEPNSKEIRDA---LQLLREKIHR---- 266 Query: 196 IGRYYLKRGE--YVA 208 Y +R Y A Sbjct: 267 ----YHRRSAMTYKA 277 >gi|237837191|ref|XP_002367893.1| TPR domain-containing protein [Toxoplasma gondii ME49] gi|211965557|gb|EEB00753.1| TPR domain-containing protein [Toxoplasma gondii ME49] Length = 823 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 60/195 (30%), Gaps = 51/195 (26%) Query: 37 GWERQSSRDVYL---DSVTDVRYQREVYEKAVLFLKEQNFSKAY----EYFNQCSRDFPF 89 G S++ + + + ++ +E+N+ A + Q FP Sbjct: 111 GCSHDHSKERQIYEKPTGEKIDAAERFRQEGNAAFREKNYGLAAVNYRKALLQFDYTFPD 170 Query: 90 AGVARKSL--------LMSAFVQYSAGKYQQAASLGEEYIT------QYPESKNVDYVYY 135 +K + L A + Y++ YI P++ YY Sbjct: 171 TDEEQKRMDSVKLPCHLNLAACKLQQQDYEEV------YIQCRLALEMDPKNTK---AYY 221 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 G+++ Q V + + + + NS ++ A + + R ++ Sbjct: 222 RRGLAHLQQDNFV--------KAKEDLMEALTQEPNSKEIRDA---LQLLREKIHR---- 266 Query: 196 IGRYYLKRGE--YVA 208 Y +R Y A Sbjct: 267 ----YHRRSAMTYKA 277 >gi|328948519|ref|YP_004365856.1| hypothetical protein Tresu_1662 [Treponema succinifaciens DSM 2489] gi|328448843|gb|AEB14559.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema succinifaciens DSM 2489] Length = 711 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 59/207 (28%), Gaps = 48/207 (23%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKY 110 + E++ +A ++ + A + + + P + +L A Y+ G Y Sbjct: 24 AQKKSALELFNQAQELQQQSRWFDAVDLYQEALLLNPQYGD----ALYNLALCHYALGSY 79 Query: 111 QQAASLGEEYITQYPESKNVDYV------YYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + + + Y L G+S + R S+ Sbjct: 80 DLSVQYAD---------EASKYARNFSDIQNLKGLSLISLGR--------VNEAKDVFSQ 122 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 I+++Y N LA ++ GR + Y A+ R Sbjct: 123 ILKKYPN-----DVNARFG-----LAELDLLDGRLTVAESRYQDALKR----------DA 162 Query: 225 HAEEAMARLVEAYVALALMDEAREVVS 251 +A+ L + + + + Sbjct: 163 SNRKALLSLALVSAEMGKPEVSENYIR 189 >gi|145518792|ref|XP_001445268.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124412712|emb|CAK77871.1| unnamed protein product [Paramecium tetraurelia] Length = 467 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 5/115 (4%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF-PFAGVA 93 LV ++ + + L ++ E K +N+ +A + + + + F A Sbjct: 112 LVDFKEKQKQKWELSDEEKTNEAKKFKELGTTAFKAKNYPEAIKQYLEAASYFEAETEFA 171 Query: 94 -RKSL---LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + L L + Y Y+++ + I P + + YY ++Y+ Sbjct: 172 HEQKLASHLNLSLCYYYTKDYKESVDQATKVIQDKPNNAQLVKAYYRRAIAYSSQ 226 >gi|118394721|ref|XP_001029723.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89283985|gb|EAR82060.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 1093 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 83/235 (35%), Gaps = 47/235 (20%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A +F +++SKA EYF + + P + ++ L A+ + K++ + + I Sbjct: 168 QAQIFFFAKDYSKALEYFKEALQKNP--KLPGRARLGLAYCFFMQKKFELSKRAFQRVID 225 Query: 123 Q-----------------------YPESKNVDY--------VYYLVGMSYAQMIRDVPYD 151 Y ++ N Y V Y + Y +V Sbjct: 226 LDKTVYEAYLGLAILAFQRKEWNVYIQNLNKAYELNKSSPLVLYYIAEFYYIQQDNVNT- 284 Query: 152 QRATKLMLQYMSRIVERYTNSP----YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 ++ + + + + +S YVK R +++L ++ IG + + +Y Sbjct: 285 KKMAFQAINNLKNLPKILMDSDKLKTYVKQTRSDFYDIKSRL--YQM-IGSCFHREQQYD 341 Query: 208 AAIPRFQLVLANYSD-----AEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 A R + + + + +A L ++ +AL + ++ L Y Sbjct: 342 QAFRRLEEIRNQCPENEKELTFEFFKPLAYL-QSKLALGQNKQTQQQYYLKALNY 395 >gi|20090471|ref|NP_616546.1| TPR domain-containing protein [Methanosarcina acetivorans C2A] gi|19915489|gb|AAM05026.1| TPR-domain containing protein [Methanosarcina acetivorans C2A] Length = 1885 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 84/228 (36%), Gaps = 44/228 (19%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 + + + + + +Y K ++F++++ + KA E F++ + P Sbjct: 897 KAKNGEASGEESENSHKDSPLYWKGLMFIRQEAYEKALEIFSKLTEQNPQ---------- 946 Query: 100 SAFV---QY------SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 F + GK+++A+ ++ + P +++ +YY +G+S ++ Sbjct: 947 --FAEGWYFIGMSCSKLGKHEEASKALKKALEIDPAFRDLHDIYYRLGLSCFEL------ 998 Query: 151 DQRATKLMLQYMSRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 + L+ + NS ++ + K + + L+ G Y A Sbjct: 999 --GNFEEALKAFEEALSTVPENSERNPD------EAQDIMYKKSLSL----LRLGRYAEA 1046 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV-VSLIQER 256 F+ VLA EA+A L A EA E+ ++ + Sbjct: 1047 ESGFKEVLAL---DPANTEALAHLSTACFKKGHYKEALEIFERVLSQN 1091 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 32/238 (13%), Positives = 75/238 (31%), Gaps = 33/238 (13%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQ--REVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 ++ + G ++ + ++ + +K + L + +A + F Sbjct: 1494 LSGLVMRGLDQNEEAVEVFEKALELNPALTAALEQKGLGLLALCRYEEARDAFGSALALN 1553 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 P L A Y +++A+ E + P + Y++G++ ++ Sbjct: 1554 PEN---VDILYSRAVASYKLLDFEEASKDLERLLLFAPGFPDYTKACYMLGIASIEL--- 1607 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 + + LQ + ++ER A + + + EY Sbjct: 1608 -----QDYERALQALDLVLEREPAHR---DALYNMALVL--------------FNLEEYE 1645 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 A F+ +L + E++ L + L + EA + P+ A Y Sbjct: 1646 EAARTFEQLLEA---SPEDPESLNYLGLCLLELEDLKEALKAFEKAALFNPKNEEALY 1700 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 65/191 (34%), Gaps = 38/191 (19%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 E +++ + +K + + KA FN+ P +++L K Q+A Sbjct: 4 TNDEAFQRGLDLVKRKRYEKAINTFNKILDKDPDH---KEALFHRGLALLETEKTQEALD 60 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + P + + Y G +A + R + L+ +E ++P Sbjct: 61 SFNDALQLEPGNSD---ALYRKGTCFAALGR--------FEEALEAYESALESSPDTP-- 107 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLK----RGEYVAA----------IPRFQLVLANYS 221 + + + ++ E I + K + EY AA R++ L ++ Sbjct: 108 -EIWYMMGLAFAEMERAEASILCF-EKALELKPEYTAACCAMGTVAGKAERYEEALEDF- 164 Query: 222 DAEHAEEAMAR 232 E A+ Sbjct: 165 -----ERALEI 170 Score = 42.0 bits (98), Expect = 0.084, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 90/256 (35%), Gaps = 55/256 (21%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREV--------YEKAVLFLKEQNFSKAYEYFNQ 82 A C +G + Y +++ D E+ Y K ++ K + + A E F+ Sbjct: 142 AACCAMG-TVAGKAERYEEALEDFERALEISPRNSEAWYAKGLILAKIEKYENALECFDF 200 Query: 83 CSRDFPFAGVA-RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 R+ P A + L+ A + GK ++A E+++ ++P ++ Y G+ Sbjct: 201 LIREKPKDTAALEQKCLILA----NLGKNEEALGALEDFLKKFPANEA---ALYHKGILL 253 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 +++ R + + +S++++ + Sbjct: 254 SELSR--------YEDAERTISKVLKLNPGHREA------------------------WF 281 Query: 202 KRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 ++G + + R + + +A EA A + L + +EA E I E Y Sbjct: 282 RKGFALVQLLRLNEAIEAFDEAIRLDPAYFEAWNYKCFALMKLEVYEEALEAFDTILETY 341 Query: 258 PQGY--WARYVETLVK 271 P W L+K Sbjct: 342 PDMEEIWYNRALALLK 357 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 47/135 (34%), Gaps = 19/135 (14%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSAGKYQ 111 D + VY V+ K++ + A F + P+ + + L L A G Y+ Sbjct: 1760 DPNNIKAVYNVGVVCFKQKLYETAARAFKEALTINPWHEPSLRYLGLSLA----KTGDYE 1815 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A E+ + P+ G+ ++ + ++ ++ Y N Sbjct: 1816 DALKAFEKLLRIKPQDPQ---AMNYRGVLLGKLEK--------YGEAIKAFDEVLSIYPN 1864 Query: 172 SPYVKGARFYVTVGR 186 + GA+ + V + Sbjct: 1865 ---MAGAKEKLEVLK 1876 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 7/68 (10%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y +A+ LK QNF +A F + + P ++ L++ AGKY++A + Sbjct: 349 YNRALALLKLQNFPEAARSFARVTELDPGNTDAWFQQGRLLA-----RAGKYEEALETFD 403 Query: 119 EYITQYPE 126 + +P+ Sbjct: 404 RLLEYHPD 411 Score = 37.8 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 59/164 (35%), Gaps = 33/164 (20%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES-KN 129 + + +A + F+ + P K++ V + Y+ AA +E +T P + Sbjct: 1744 EQYREALKSFDNVLKKDPNN---IKAVYNVGVVCFKQKLYETAARAFKEALTINPWHEPS 1800 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + Y +G+S A+ + L+ +++ P A Y V +L Sbjct: 1801 LRY----LGLSLAKT--------GDYEDALKAFEKLLRIKPQDP---QAMNYRGVLLGKL 1845 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 +Y AI F VL+ Y + A+E + L Sbjct: 1846 --------------EKYGEAIKAFDEVLSIYPNMAGAKEKLEVL 1875 >gi|145517342|ref|XP_001444554.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124411976|emb|CAK77157.1| unnamed protein product [Paramecium tetraurelia] Length = 456 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 43/115 (37%), Gaps = 5/115 (4%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF-PFAGVA 93 LV ++ + + L ++ E KE+N+ +A + + + + F A Sbjct: 112 LVDFKEKQKQKWELSDEEKTTEAKKFKELGTTAFKEKNYPEAIKQYLEAASYFEAETEFA 171 Query: 94 -RKSL---LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + L L + Y Y+++ + I P + YY ++++ + Sbjct: 172 HEQKLASHLNLSLCYYYTKDYKESLDHASKVINDKPNHAQLVKAYYRRAIAHSSL 226 >gi|253582116|ref|ZP_04859340.1| tetratricopeptide repeat family protein [Fusobacterium varium ATCC 27725] gi|251836465|gb|EES65002.1| tetratricopeptide repeat family protein [Fusobacterium varium ATCC 27725] Length = 950 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 91/235 (38%), Gaps = 42/235 (17%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 Y+R +Y+ + +L ++N+SKA E F + ++ + ++ ++L A Y+ Y++ Sbjct: 130 YERALYDSGMTYLAKENYSKAEEMFQRVIQMNKKY-YSE----AILSMAMSSYNKADYKK 184 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 EY ++KN +YYL G +Y ++ +T+ + Y ++ + S Sbjct: 185 TLLFLNEYSNGKDKNKNQSLLYYLYGSTYYKL--------NSTEDAIVYFQKVANKDKIS 236 Query: 173 PYVKGARFYVTVG------RNQLAAK--------EV-----EIGRYYLKRGEYVAAIPRF 213 Y K + + N + E IG Y RGEY A+ + Sbjct: 237 SYGKKSILSLIEIYSNRGDVNSMQRYLTMLENTKEYGEAMRMIGDLYATRGEYEKAVGYY 296 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER--YPQGYWARYV 266 + + + M + L + EA++ ++ Y Q + + Sbjct: 297 SKT-----NTPNDPKLMYGYGFSLYKLNRLKEAQKYFEGLRNTTYYNQSLYYIFA 346 Score = 38.9 bits (90), Expect = 0.84, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 71/221 (32%), Gaps = 29/221 (13%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS-RDFPFAGVARKSLLMSAFVQ 104 YL+ + +Y K + F+ +++A FNQ D + K Sbjct: 500 TYLNDEGTESSKENIYLKGIAFVGMGKYAEAETVFNQLEVDDASDTVLQTKVKFNKMRNY 559 Query: 105 YSAGKYQQAASLGEEYITQ-YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + GKY+ A GEEY+ PE KN V + +SY + L Sbjct: 560 FLWGKYEDAIKYGEEYLQLENPEGKN--EVMDKLAISYFR---------------LDNFE 602 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 + E Y ++ A +I Y + A ++ V Y D Sbjct: 603 KSREYY----------NKLSTVPEFEAYGRFQIADTYYAEKNFEKAKEEYKHVAEQYGDG 652 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 ++ E+A + + L D + +YP Sbjct: 653 QYGEKAYYWYLTTLINLGETDIFEKEKDAFLIKYPGSKMKD 693 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 42/106 (39%), Gaps = 15/106 (14%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q+ + + ++RY +S Y + + I + Y + +Y AI Sbjct: 35 QKKFSMAITESVSFLKRYPDSRYTRNIQDR--------------IAKTYFLQEDYNNAIK 80 Query: 212 RFQLVLANYS-DAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 F+++L N A+ +E L+++Y AL + + + + Sbjct: 81 YFKIILMNNDVKAKEKDEINFYLMKSYTALEDTKNSDFYMEALDKN 126 >gi|168704035|ref|ZP_02736312.1| hypothetical protein GobsU_31164 [Gemmata obscuriglobus UQM 2246] Length = 414 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 7/157 (4%) Query: 80 FNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 R A K+L +V + G + +A ++ + +S + Sbjct: 185 LEALQRVHTHDITGPTADKALFWCGYVNFIRGNFSEADQFFSQFCELHKDSTLLPQAMAF 244 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT----VGRNQLAAK 192 + YD R L +S +T R+Q A K Sbjct: 245 AIQAKNNATGGASYDGRKCAEALHLVSVAESSVPELANDPAMAEKLTRAKFAIRSQQAEK 304 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 + + YY + G +A+ ++LV Y+ ++AE A Sbjct: 305 DFRMAEYYERTGHPGSAVFYYELVRRRYAGTKYAEAA 341 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 28/79 (35%), Gaps = 2/79 (2%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC-SRDFPFAGVARKSLL 98 +++ + S D +++ A + ++ +A F +A ++ Sbjct: 39 SSAAKPILSSSYNDPEADQKL-AAAEQLYQSGDYKQALGQFRTLADNQSNPKELAERARF 97 Query: 99 MSAFVQYSAGKYQQAASLG 117 M +Y G Y +AA Sbjct: 98 MQGECRYQLGHYPEAADTY 116 >gi|154174683|ref|YP_001408802.1| TPR repeat-containing protein [Campylobacter curvus 525.92] gi|112803721|gb|EAU01065.1| TPR repeat-containing protein [Campylobacter curvus 525.92] Length = 286 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 19/147 (12%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + SS + S + ++V + + L S+A EYF ++ + A L Sbjct: 154 AKSSSDNSTTKSNFSDKSDKDVMSEGIKLLNSGKTSEAAEYFEYLNKKG-YKPAASNFYL 212 Query: 99 -MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRA 154 A Y Y A ++ I S DY + Y +S+ ++ Sbjct: 213 GEIA---YKQKSYSTAIQYYQKSIQ---GSDKADYTSKLLYHTAISFDKI--------GD 258 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFY 181 T+ ++ + Y +S + A Sbjct: 259 TQSANRFYKALKVGYPDSKEAQAAPSR 285 >gi|300113468|ref|YP_003760043.1| type IV pilus biogenesis/stability protein PilW [Nitrosococcus watsonii C-113] gi|299539405|gb|ADJ27722.1| type IV pilus biogenesis/stability protein PilW [Nitrosococcus watsonii C-113] Length = 257 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 38/264 (14%), Positives = 76/264 (28%), Gaps = 43/264 (16%) Query: 21 KFALTIFFSIAVCFLVGWER-QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 K + F+I + L G SS++ S+ + + + V + K+ +A + Sbjct: 2 KLGMIGVFTITLLALAGCASIFSSQEQVTPSIDKEKAAKINVQLGVEYFKQGELEQALKK 61 Query: 80 FNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + + P + +LL G+ ++A + I P Y Sbjct: 62 LERAIQQDPDIPSAYNAMALLKQ-----RLGQTEEAEKYFQRAIKLDPA--------YSE 108 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVER--Y--TNSPY--VKGARFYVTV------- 184 + + Y+Q V+ Y Y A + Sbjct: 109 AQNNYGVFL---YNQGHYGDAEARFLEAVKNPLYGTPELAYENAGMAAQKLAEFDKAERY 165 Query: 185 ------GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEAMARLVEAY 237 +L + ++G Y R Q L Y A H +++ ++ Sbjct: 166 YRKALQLEPRLPKSLYHMAEINFEKGHYQ----RAQEYLQRYRVGARHTPKSLWLGIKIE 221 Query: 238 VALALMDEAREVVSLIQERYPQGY 261 L D L++ +P Sbjct: 222 RELGNEDAVSSYALLLRRNFPDSP 245 >gi|260948502|ref|XP_002618548.1| hypothetical protein CLUG_02007 [Clavispora lusitaniae ATCC 42720] gi|238848420|gb|EEQ37884.1| hypothetical protein CLUG_02007 [Clavispora lusitaniae ATCC 42720] Length = 527 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 50/154 (32%), Gaps = 33/154 (21%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASL 116 ++ ++ LK+ +++A E + + + P + ++ + S +Y A + Sbjct: 8 KLKDEGNALLKQHKYAEAAEKYTEAIKLDPKNAVFYSNRAQV-----HISLEEYGSAIAD 62 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + + N YY G+S ++ K +I+++ N Sbjct: 63 CDRALEV---DPNYAKAYYRKGVSLMALLN--------YKEAQGNFKKILQKLPNDRLTL 111 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 N YLK+ + AI Sbjct: 112 ENYK---QCVN------------YLKKQAFERAI 130 >gi|119477237|ref|ZP_01617473.1| hypothetical protein GP2143_02904 [marine gamma proteobacterium HTCC2143] gi|119449600|gb|EAW30838.1| hypothetical protein GP2143_02904 [marine gamma proteobacterium HTCC2143] Length = 267 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 2/109 (1%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 ++ +V + ++ Y++A + + F A E F Q D+P A Sbjct: 120 GSGLNGNAENVVPPVIMVQPEEKTAYDRAYALVTSRRFDDALEAFKQFVIDYPEGKYAPN 179 Query: 96 SLLMSAFVQY--SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 S + + + A + + I QYP + Y +G Y Sbjct: 180 SFYWMGELYQVITPQDLESARQVFTQLIDQYPGHAKIPDAMYKLGKVYF 228 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 36/105 (34%), Gaps = 12/105 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R L+ + V Y Y + +++ + +++E R Sbjct: 155 RRFDDALEAFKQFVIDYPEGKYAPNSFYWMGELYQVITPQDLESAR------------QV 202 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 F ++ Y +AM +L + Y ++++++ + Y Sbjct: 203 FTQLIDQYPGHAKIPDAMYKLGKVYFLKGNRSKSQDLLDQVIADY 247 Score = 40.1 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 38/89 (42%), Gaps = 6/89 (6%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 K+ A+ ++ ++ A ++++ YPE K +Y +G Q+I + Sbjct: 141 EKTAYDRAYALVTSRRFDDALEAFKQFVIDYPEGKYAPNSFYWMG-ELYQVIT-----PQ 194 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + Q ++++++Y + A + + Sbjct: 195 DLESARQVFTQLIDQYPGHAKIPDAMYKL 223 >gi|309792390|ref|ZP_07686857.1| TPR repeat-containing protein [Oscillochloris trichoides DG6] gi|308225545|gb|EFO79306.1| TPR repeat-containing protein [Oscillochloris trichoides DG6] Length = 2323 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 67/207 (32%), Gaps = 42/207 (20%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + Y++A FL+ +A FP + A + ++ ++ QA + Sbjct: 7 QAAYDQARAFLEVNKVEQAVAVAQHILEYFPESLEAHRI---LGEAYLASRQFDQAEAAF 63 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P +N+ + +G++Y + + + + +E + Sbjct: 64 SRVLNADP--ENIP-AHVGLGITYERQ-NKLDR-------AVTEFEQALEVRPD------ 106 Query: 178 ARFYVTVGRNQLAAKEVEI---------------GRYYLKRGEYVAAIPRFQLVLANYSD 222 + R+QL E+ R Y K AI F+ V+ Y D Sbjct: 107 ----MHELRSQLLRLYTEVWGNEGATLRLSRPGLARLYAKGNMLPQAIQEFRSVIDEYPD 162 Query: 223 AEHAEEAMARLVEAYVALALMDEAREV 249 +A L EA D A EV Sbjct: 163 ---RFDARVGLAEALWRDGQADVAAEV 186 >gi|116253707|ref|YP_769545.1| hypothetical protein RL3967 [Rhizobium leguminosarum bv. viciae 3841] gi|115258355|emb|CAK09457.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 328 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 47/142 (33%), Gaps = 14/142 (9%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 + + + + + Y+ A + ++S A F Q +P + Sbjct: 180 ATIGSGPIPDASPKTPQQTASLGSEADQYKAAYGHVLSGDYSTAELEFTQYITRYPSSAR 239 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP---ESKNVDYVYYLVGMSYAQMIRDVP 149 A + YS GKY +A + ++ + S+ + +GMS A + + Sbjct: 240 AADANFWLGEALYSQGKYNEA---AKTFLNAHQKYGTSEKAPEMLLKLGMSLAALDNN-- 294 Query: 150 YDQRATKLMLQYMSRIVERYTN 171 + + + +RY Sbjct: 295 ------ETACATLREVSKRYPK 310 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 ++ + RY +S A F++ +G+Y A F Sbjct: 223 AELEFTQYITRYPSSARAADANFWLGEAL--------------YSQGKYNEAAKTFLNAH 268 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y +E A E + +L + AL + A + + +RYP+ Sbjct: 269 QKYGTSEKAPEMLLKLGMSLAALDNNETACATLREVSKRYPKAS 312 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 26/86 (30%), Gaps = 8/86 (9%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 +A+ +G Y A +YIT+YP S + +G + Q Sbjct: 207 QYKAAYGHVLSGDYSTAELEFTQYITRYPSSARAADANFWLGEALYS--------QGKYN 258 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYV 182 + ++Y S + Sbjct: 259 EAAKTFLNAHQKYGTSEKAPEMLLKL 284 >gi|62184717|ref|YP_219502.1| putative lipoprotein [Chlamydophila abortus S26/3] gi|62147784|emb|CAH63530.1| putative lipoprotein [Chlamydophila abortus S26/3] Length = 318 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 81/238 (34%), Gaps = 39/238 (16%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S + T +E + +L++Q + KA F + FP + ++L ++ Sbjct: 29 SGKLSPQKFTPKYSTQEYLSEGKRYLEQQRYRKALLCFGMITHHFPQDPLYSEALYLTGV 88 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDY------VYYLVGMSYAQ-------MIRDVP 149 + + A Y+ + +Y + Y + S+AQ ++ P Sbjct: 89 CYFKNDQPDLAEKAFSAYLQL----PDANYSEELFLMKYSIAKSFAQGKRKRIFLLEGFP 144 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 A L+ I+ + N K + G + + ++ A Sbjct: 145 KLANADADALRIYDEILTAFPN----KDLGAQALYLK----------GDLLVTKKDFPEA 190 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVA--------LALMDEAREVVSLIQERYPQ 259 I F+ + +S + ++ RL E Y+ L ++ A+ I +++P Sbjct: 191 IKTFKKLTLQFSAHPLSPKSFVRLSEIYLMQAQKEPHNLQYLNLAKINEEAIAKQHPN 248 Score = 42.4 bits (99), Expect = 0.075, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 53/152 (34%) Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 A +++ FP + ++L + + + + +A ++ Q+ + Sbjct: 152 DALRIYDEILTAFPNKDLGAQALYLKGDLLVTKKDFPEAIKTFKKLTLQFSAHPLSPKSF 211 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 + Y + P++ + L I +++ N P V + A Sbjct: 212 VRLSEIYLMQAQKEPHNLQYLNLAKINEEAIAKQHPNHPLNSVVSANVRSMCERYALGLY 271 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 GR+Y K+ + AA + + NY ++ Sbjct: 272 STGRFYEKKKKPHAASIYYTTAIENYPESSLV 303 >gi|289613279|emb|CBI59873.1| unnamed protein product [Sordaria macrospora] Length = 460 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 40/135 (29%), Gaps = 26/135 (19%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + ++ KA E++++ + P + ++ Y A Sbjct: 13 NEGNKAFAAHDWPKAIEFYDKAIELNDKEP-TFWSNRAQ-----AHLKTEAYGYAIRDAT 66 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + I P YY +YA ++ K ++ V+ ++ A Sbjct: 67 KAIELNPGFVK---AYYRRATAYAAILN--------PKEAVKDFKTCVKIAPDNK---DA 112 Query: 179 RFYVTVG---RNQLA 190 + + QLA Sbjct: 113 KLKLVECEKIVRQLA 127 >gi|298246132|ref|ZP_06969938.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter racemifer DSM 44963] gi|297553613|gb|EFH87478.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter racemifer DSM 44963] Length = 678 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 36/276 (13%), Positives = 72/276 (26%), Gaps = 61/276 (22%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 +A G Q+ + V Y + L +N+++A Sbjct: 390 ILARPVGSGGSIQARPVAPSNGVAPASDPTVAYRAGLQALNNKNYAEAVNQLKLAQSQG- 448 Query: 89 FAGVARKSLLMSAFVQY----SAGKYQQAAS----LGEEYI-TQYPESKNVDY-VYYLVG 138 L A+ QY + + E++ + N + Y+ +G Sbjct: 449 GTPYDILYNLGRAYRQYGLSVRDIDQKLSQENMKYAAEQFEAAL--QHSNASFNAYFQLG 506 Query: 139 MSY--------------------------AQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 M Y + +Q + + Y+ + Sbjct: 507 MCYRDLSLLPQAGQSFKKALSLTPDDPAVYYQLGLTSLEQGSFRDAESYLREGLRLSPEH 566 Query: 173 PYVKGA-------RFYVTVGRNQLAAKEVEI-----------GRYYLKRGEYVAAIPRFQ 214 + A L V+I GR +++ E+ A+ F+ Sbjct: 567 ALMLVALGRLYGETKRTRESIEAL-RHAVQIDASSWEAWYQLGRAHMRAKEWKYAVSAFE 625 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 S + A+ Y+ L EAR+ + Sbjct: 626 RARKTGSQNPNIYSAL---ANCYLKLNRKAEARQTL 658 >gi|149919990|ref|ZP_01908465.1| phosphoglyceromutase [Plesiocystis pacifica SIR-1] gi|149819263|gb|EDM78697.1| phosphoglyceromutase [Plesiocystis pacifica SIR-1] Length = 565 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 42/142 (29%), Gaps = 23/142 (16%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA-----FVQYSA 107 ++ R++Y +A + +D+ A + LL+ F Sbjct: 442 ELERCRDLYADGETRF------RAARCLSDFMKDYGREPEAVEGLLLLGTLRMDFAH--- 492 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 YQ A EE++ + P + Y + ++ D + + Sbjct: 493 -DYQSATRNIEEFLRRAPSHPKAELARYQLVLA--------AIDAGYIDRAISRSRHYLS 543 Query: 168 RYTNSPYVKGARFYVTVGRNQL 189 Y + YV ++ L Sbjct: 544 LYPDGQYVGRILQRFPELKSAL 565 >gi|237739469|ref|ZP_04569950.1| tetratricopeptide repeat family protein [Fusobacterium sp. 2_1_31] gi|229423077|gb|EEO38124.1| tetratricopeptide repeat family protein [Fusobacterium sp. 2_1_31] Length = 936 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 48/134 (35%), Gaps = 13/134 (9%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + YQR ++ FL + N A + + + + +++++ V Y+ Y Sbjct: 123 EKTYQRALFAVGQDFLSKDNNEAAKDIYREIIDKKY---ENDKEAMMGLGIVNYNLKDYD 179 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 +A E+ P+ +N D V YL + + T+ + + Sbjct: 180 KAIYWFSEFQKSKPK-ENKDMVSYLKASALYRK--------GNTEQAIVDFEELANANPA 230 Query: 172 SPYVKGARFYVTVG 185 + Y K A Y+ Sbjct: 231 NDYSKKAILYLIEI 244 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 85/246 (34%), Gaps = 31/246 (12%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 S + L+ ++ + YL SV+D Y K V + + + +A +F + + Sbjct: 476 IISSLMSSLLDQQKYDEMNQYLSSVSDDNSLS--YLKGVAAMGLKKYDEAETHFQKVLAN 533 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI-TQYPESKNVDYVYYL--VGMSYAQ 143 ++ K L + A +Y +A GE+Y+ P+ + Y L +G+SY + Sbjct: 534 GDKG-LSTKVYLNRVRNFFLAERYNEAIQAGEQYLSRINPDKEKAIYSEMLDKIGLSYFR 592 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 + + YDQ S Y K A + +I Y Sbjct: 593 VGK---YDQAR-----------------SYYSKIASMKGYEVYGK-----FQIADSYYNE 627 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 Y A ++ + NY + + E+A + + L + + YP Sbjct: 628 KNYAKAGELYKSIYNNYGETFYGEQAYYKYITTLSLLGNTEAFEREKNNFLSVYPNSTLR 687 Query: 264 RYVETL 269 + L Sbjct: 688 TTISNL 693 >gi|328953891|ref|YP_004371225.1| hypothetical protein Desac_2216 [Desulfobacca acetoxidans DSM 11109] gi|328454215|gb|AEB10044.1| hypothetical protein Desac_2216 [Desulfobacca acetoxidans DSM 11109] Length = 315 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 42/120 (35%), Gaps = 8/120 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + + + K++++ A E F + + P A ++ A Y + +A + Sbjct: 189 FAEGLTLYKQKSYGPAREKFQRYLEEHPKGEKAIEARYYLADSLYQEKHHDEAIVEFNKL 248 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + YP+S + Q +K+ + +++ Y SP AR Sbjct: 249 LEGYPKSTLAP--------ASLLKQAYAFKAQGKSKVHNLILEKLIADYPQSPEAVQARK 300 Score = 42.8 bits (100), Expect = 0.058, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 39/119 (32%), Gaps = 14/119 (11%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q++ + R +E + AR+Y+ + L + + AI Sbjct: 198 QKSYGPAREKFQRYLEEHPKGEKAIEARYYLA---DSL-----------YQEKHHDEAIV 243 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 F +L Y + A ++ + A+ A ++ + YPQ A L Sbjct: 244 EFNKLLEGYPKSTLAPASLLKQAYAFKAQGKSKVHNLILEKLIADYPQSPEAVQARKLR 302 Score = 40.9 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 36/88 (40%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + Y A +E++ +A FN+ +P + +A SLL A+ + GK Sbjct: 216 PKGEKAIEARYYLADSLYQEKHHDEAIVEFNKLLEGYPKSTLAPASLLKQAYAFKAQGKS 275 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVG 138 + + E+ I YP+S L G Sbjct: 276 KVHNLILEKLIADYPQSPEAVQARKLRG 303 >gi|110679378|ref|YP_682385.1| hypothetical protein RD1_2099 [Roseobacter denitrificans OCh 114] gi|109455494|gb|ABG31699.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length = 281 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 35/85 (41%), Gaps = 2/85 (2%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-QQAAS 115 + + ++KA L + N+ A + F S ++P +A + L G+ + A + Sbjct: 158 EEDDFKKAQAALAQGNYQSAADQFAAFSMNYPGGPLAAGADLGRGEALEGLGRTREAARA 217 Query: 116 LGEEYITQYPESKNVDYVYYLVGMS 140 + + + P + + +G S Sbjct: 218 YLDSF-SAEPTGQVAPQALFRLGRS 241 >gi|196228294|ref|ZP_03127161.1| hypothetical protein CfE428DRAFT_0325 [Chthoniobacter flavus Ellin428] gi|196227697|gb|EDY22200.1| hypothetical protein CfE428DRAFT_0325 [Chthoniobacter flavus Ellin428] Length = 812 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 63/202 (31%), Gaps = 21/202 (10%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ A+ L +N+ ++ + S P + + LL F Q AG A E Y Sbjct: 417 FDAALSALNRRNYESFFKDYRDLSNLAPNSALRSDLLLEEGFAQARAGD-PHAGDTIELY 475 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +P+ + + V ++ +Y+ + ++ Sbjct: 476 LHNFPKHRRQNEAQ--VALAELAFADGDKLG------AGRYLQVVDSSSPDT----DTAA 523 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 LA E I R + L ++ + + E +L + Y + Sbjct: 524 RAACLAVFLADAE--------TPPNPAKVIERARKFLHDFPRSAYLPEVRMKLGQTYFST 575 Query: 241 ALMDEAREVVSLIQERYPQGYW 262 A +LI P G + Sbjct: 576 GDHANAETQFTLIARENPNGPY 597 >gi|302036000|ref|YP_003796322.1| hypothetical protein NIDE0624 [Candidatus Nitrospira defluvii] gi|300604064|emb|CBK40396.1| protein of unknown function, containing TPR repeats [Candidatus Nitrospira defluvii] Length = 399 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 64/211 (30%), Gaps = 47/211 (22%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAG-KYQQAA 114 YE+ V +E N A E + P L A+ V + + +A Sbjct: 84 YERGVTLFREGNADGAIEALKKALVQNP--------KLAEAYHVLGLVYFQSKRNPDEAI 135 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 ++ + P S + + DV Q + + ++ + Sbjct: 136 QAYKQSLKLGPASAEI-----------LNDLADVYLAQGRGSDAEGVLRQALDIAPGNEE 184 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 +++ R Y R + A+ +Q +L D EA+ L Sbjct: 185 A-----------------HLDLARLYEARHDRANALKMYQSLLRVRPD---HAEALYHLA 224 Query: 235 EAYVALALMDEAREVVSLIQERYPQ--GYWA 263 Y + + ARE +S + + P W Sbjct: 225 SLYDSQGDLKLAREYLSRLTQANPGHADAWY 255 >gi|298368849|ref|ZP_06980167.1| periplasmic protein [Neisseria sp. oral taxon 014 str. F0314] gi|298282852|gb|EFI24339.1| periplasmic protein [Neisseria sp. oral taxon 014 str. F0314] Length = 225 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 48/138 (34%), Gaps = 11/138 (7%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 + D + +Y++A + + N++ A + ++RK++ + Sbjct: 91 AKNDAAQTVADTDANETRLYDQAFKYYRSGNYTAAAAVLKGADGGN-GSEISRKNMYLLL 149 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQ 160 Q G + ++G Y ++ + Y +G + +D+ D Sbjct: 150 QSQQRLGNCESVINIGGRYANRFRNTAQAPDAMYSIGQCQYKLQQKDIARD--------- 200 Query: 161 YMSRIVERYTNSPYVKGA 178 +++ Y +S K A Sbjct: 201 TWRKLIHTYPDSEAAKRA 218 Score = 38.9 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 20/57 (35%), Gaps = 7/57 (12%) Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 RF+ + A +AM + + L D AR+ + YP A+ Sbjct: 169 ANRFR-------NTAQAPDAMYSIGQCQYKLQQKDIARDTWRKLIHTYPDSEAAKRA 218 >gi|297621740|ref|YP_003709877.1| hypothetical protein wcw_1522 [Waddlia chondrophila WSU 86-1044] gi|297377041|gb|ADI38871.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044] Length = 347 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 74/216 (34%), Gaps = 10/216 (4%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRY--QREVYEKAVLFLKEQNF--------SKAY 77 F +A C G+ S + + ++ + + A + F A Sbjct: 93 FDLANCAFNGYLSSQSNPRFFHEAVEYKFTIAEQFRKGARRHYRGSRFFPKWANGQDLAL 152 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E +++ P + +L A + + G+++ + S + I ++P+++ Y + Sbjct: 153 EIYDEVIASMPGDELTIHALYSKACLLWHMGEFRDSVSAFQTIIRRFPKNELAPDSYMRI 212 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 Y + + + R + + AR + A+ EI Sbjct: 213 MKVYIDQAKREKQNPDLIAFAQMNLKRFEADFPRDAGLDVARADYLRLKEMYASALYEIA 272 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 +Y + + AA+ +Q + + A + +RL Sbjct: 273 VFYERISQPRAAVIYYQKASLEFPETVIAGRSRSRL 308 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 21/196 (10%), Positives = 52/196 (26%), Gaps = 47/196 (23%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 ++ T + +E + + + A ++ + S +FP + + Sbjct: 28 ELTRKEDTPYLSAADHFELGMNAFHHGDMTLAVKHLHIVSHNFPNTSYGQDAFFYLGMSY 87 Query: 105 YSAGKYQQAASLGEEYI--TQYPE--SKNVDYV-----YYLVGM---------------- 139 Y ++ A Y+ P + V+Y + G Sbjct: 88 YKLCEFDLANCAFNGYLSSQSNPRFFHEAVEYKFTIAEQFRKGARRHYRGSRFFPKWANG 147 Query: 140 ------SYAQMIRDVPYDQ----------------RATKLMLQYMSRIVERYTNSPYVKG 177 Y ++I +P D+ + + I+ R+ + Sbjct: 148 QDLALEIYDEVIASMPGDELTIHALYSKACLLWHMGEFRDSVSAFQTIIRRFPKNELAPD 207 Query: 178 ARFYVTVGRNQLAAKE 193 + + A +E Sbjct: 208 SYMRIMKVYIDQAKRE 223 >gi|198433200|ref|XP_002124360.1| PREDICTED: similar to predicted protein [Ciona intestinalis] Length = 1243 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 41/139 (29%), Gaps = 31/139 (22%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G Y + + I PE++ Y+ + + + L ++ +V Sbjct: 1016 GDYTMSIVNYSQAIKLDPENEET---YFQRAQKFEKTGDML--------LAMEDYGNVVR 1064 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 A ++Y K+ + +A+ F ++ H Sbjct: 1065 LNPT---RTDALLRR--------------AKFYFKKKSWHSAVNDFTQLIEKEPLNSH-- 1105 Query: 228 EAMARLVEAYVALALMDEA 246 A + AY A+ + A Sbjct: 1106 -ARSYRGRAYAAMGQSENA 1123 >gi|326523823|dbj|BAJ93082.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 483 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 44/140 (31%), Gaps = 29/140 (20%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARKSLLMSAFVQYSA 107 ++V+ E+ +A K FS+A E + + + A ++ F Sbjct: 7 SNVQKAEELKLRANDAFKANKFSQAVELYDQAIDLNGSNAVY--WANRA-----FAHTKL 59 Query: 108 GKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +Y A + I P+ Y YY G +Y M K L+ ++ Sbjct: 60 EEYGSAVQDATKAIEIDPK-----YSKGYYRRGAAYLAM--------GKFKEALKDFQQV 106 Query: 166 VERYTNSPYVKGARFYVTVG 185 N P A + Sbjct: 107 KRICPNDP---DATRKLKEC 123 >gi|91093513|ref|XP_969441.1| PREDICTED: similar to tpr repeat nuclear phosphoprotein [Tribolium castaneum] gi|270002675|gb|EEZ99122.1| hypothetical protein TcasGA2_TC005228 [Tribolium castaneum] Length = 1187 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 43/275 (15%), Positives = 101/275 (36%), Gaps = 33/275 (12%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 + L RA E ++TI +++A S +Y D + + + Sbjct: 473 LEEALTRAKTEAEHDPQYYNSISVTITYNLARLNEALCLFDKSEKLYKDILKERPNYVDC 532 Query: 61 YEK-AVLFLKEQNFSKAYEYF-NQCS--RDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 Y + + + + +A ++F + P + L A ++ G+ + Sbjct: 533 YLRLGCMARDKGHIYEASDWFKEALRFNTEHP-DAWSLLGNLHLAKAEWGPGQKK----- 586 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMI----RDVPYDQRATKLMLQYMSRIVERYTNS 172 E I + P + Y ++G + Q + +D ++R + L ++++ + Sbjct: 587 YER-ILKNPATSQDSYSLIVLGNVWLQTLHQPTKDKEREKRHQERALSMFKQVLKIDPKN 645 Query: 173 PYVKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQL 215 + + V R+ A +E + I Y+++ ++V+AI ++ Sbjct: 646 IWAANGIGAVLAHKGAVNEARDIFAQVREATADFCDVWLNIAHVYVEQKQFVSAIQMYEN 705 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 L + + E + L AY + + EA+ V+ Sbjct: 706 CLRKFFKYNNV-EVLQYLARAYYKASKLKEAKMVL 739 >gi|42528096|ref|NP_973194.1| hypothetical protein TDE2596 [Treponema denticola ATCC 35405] gi|41819141|gb|AAS13113.1| hypothetical protein TDE_2596 [Treponema denticola ATCC 35405] gi|325474690|gb|EGC77876.1| hypothetical protein HMPREF9353_00723 [Treponema denticola F0402] Length = 320 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 53/136 (38%), Gaps = 8/136 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 V+ +Y + +N++ A + FP + A + + + + K Sbjct: 49 EVSKNSLDEPLYWLIMANASARNYTVALNDIETFLKRFPNSSKAAEVIYQQGRICCLSAK 108 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + Q+ ++ ++ +YP + YY +G + + R K SR++ Y Sbjct: 109 HDQSINILYGFLRKYPNHRQTASAYYWIGENLYMVGR--------LKDARTIFSRVIIDY 160 Query: 170 TNSPYVKGARFYVTVG 185 +S V+ +R+ + + Sbjct: 161 PSSAKVEPSRYKIALI 176 >gi|317014666|gb|ADU82102.1| flagellar functional protein [Helicobacter pylori Gambia94/24] Length = 803 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 188 PLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGKLG 247 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP N+ Y V + + K ++Y RI+ Sbjct: 248 IKKPLLIDIGTQWIKNYPTDPNIPEALYYVAKALDEN--------NNYKQAVRYYKRILL 299 Query: 168 RYTNSPYVKGARFYVTV 184 Y NS Y A+ ++ + Sbjct: 300 EYKNSRYAPLAQMHLAI 316 Score = 42.4 bits (99), Expect = 0.065, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGKLGIKKPLLIDIGTQWIKNYPTDPNIPEALYY 276 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 277 VAKALDENNNYKQAVRYYKRILLEYKNSRYAPLAQMHLA 315 Score = 36.6 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 16/47 (34%) Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + NY + EA+ + +A +A I Y +A Sbjct: 261 IKNYPTDPNIPEALYYVAKALDENNNYKQAVRYYKRILLEYKNSRYA 307 >gi|300871725|ref|YP_003786598.1| putative cAMP-binding protein [Brachyspira pilosicoli 95/1000] gi|300689426|gb|ADK32097.1| putative cAMP binding protein [Brachyspira pilosicoli 95/1000] Length = 335 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 13/128 (10%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S+ + + Y++A+ F + ++ A + FN ++ VA S+ Y K Sbjct: 208 SIENSSINNKDYDRALEFYERGDYVNAIKSFNALIKN-EDKDVAENSIFYMGKAYYYINK 266 Query: 110 YQQAASLGEEYITQYPESKNVDYV-YYL-----------VGMSYAQMIRDVPYDQRATKL 157 Y A+ + I YP+SKNV YL +Y Q + +P ++ Sbjct: 267 YDNASKVLLSAIKTYPKSKNVKEAILYLGKSFASIGDKNKAKAYYQKVMSIPPMDSLSQE 326 Query: 158 MLQYMSRI 165 + ++ Sbjct: 327 ANDSIQKL 334 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 60/167 (35%), Gaps = 29/167 (17%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYL---------VGMSYAQMIRDVPYDQRA 154 + A KY+ A + YI S + D V+Y G+ ++ + Sbjct: 139 YFKAKKYKNALYAYKRYIQ----SADEDSVFYHTVEQRIKECKGLLNITDDSNIAPLEDN 194 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 T + ++ + R +Y +RG+YV AI F Sbjct: 195 TTE-----EPTIITKPSTSIENSSINNKDYDRAL---------EFY-ERGDYVNAIKSFN 239 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 ++ N D + AE ++ + +AY + D A +V+ + YP+ Sbjct: 240 ALIKN-EDKDVAENSIFYMGKAYYYINKYDNASKVLLSAIKTYPKSK 285 >gi|223940440|ref|ZP_03632292.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514] gi|223890885|gb|EEF57394.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514] Length = 803 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 67/202 (33%), Gaps = 41/202 (20%) Query: 69 KEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 + ++ KA EYFN P A + L+ + GK +AA E + P Sbjct: 480 DKGDYQKAIEYFNAALKNKIP--RYAV-TRLLLGNALFDQGKLPEAADQYREALRVEP-- 534 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS---RIVERYTNSPYVKGARFYVTV 184 ++ + +G+ ++ T+ + Y + R+ ++ Y+ Sbjct: 535 -DLLDANHRLGLVLFKL--------NLTREAISYFNAELRVESDLPDTRYL--------- 576 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 +G Y K G AAI +Q L D A + + L+ Sbjct: 577 -----------LGECYKKLGNLTAAIAHYQSALEITPDFIPARQQLGILL---AQQGNTS 622 Query: 245 EAREVVSLIQERYPQGYWARYV 266 EA+ I E P A + Sbjct: 623 EAQRHFQRIVELQPTNELAHFS 644 >gi|163796932|ref|ZP_02190888.1| hypothetical protein BAL199_19453 [alpha proteobacterium BAL199] gi|159177679|gb|EDP62230.1| hypothetical protein BAL199_19453 [alpha proteobacterium BAL199] Length = 318 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 10/114 (8%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-QQAASLGEE 119 Y+ A +L + ++ A + F ++ P +A + Y +Y + A + E Sbjct: 196 YQAAFDYLVKHDYDSAEQAFRAFTKAHPDDPLAGNAQYWMGETFYVRQRYQEAAVAFLEG 255 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 Y YP+S +GM+ Q +R+ + + ++P Sbjct: 256 YQK-YPKSPKSADNLLKLGMALGQ--------VGQPAEACSAFARLQKEFPDAP 300 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 22/127 (17%) Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 V Y Y V +D + + + + + + + P A++++ Sbjct: 194 VQYQAAFDYL-----VKHDYDSAEQAFRAFT---KAHPDDPLAGNAQYWM---------- 235 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 G + R Y A F Y + + + + +L A + EA + Sbjct: 236 ----GETFYVRQRYQEAAVAFLEGYQKYPKSPKSADNLLKLGMALGQVGQPAEACSAFAR 291 Query: 253 IQERYPQ 259 +Q+ +P Sbjct: 292 LQKEFPD 298 Score = 42.0 bits (98), Expect = 0.092, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 24/90 (26%), Gaps = 8/90 (8%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + + +AF Y A + +P+ Y +G ++ R Sbjct: 191 SIEVQYQAAFDYLVKHDYDSAEQAFRAFTKAHPDDPLAGNAQYWMGETFYVRQR------ 244 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + ++Y SP + Sbjct: 245 --YQEAAVAFLEGYQKYPKSPKSADNLLKL 272 >gi|126158897|ref|NP_001014372.2| serine/threonine-protein phosphatase 5 [Danio rerio] gi|125858767|gb|AAI29288.1| Zgc:110801 [Danio rerio] Length = 481 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 44/144 (30%), Gaps = 25/144 (17%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQA 113 ++ EKA + K++++ A +Y+ + P + +SL Y A Sbjct: 9 SAEKLKEKANDYFKDKDYENAIKYYTEALDLNPTNPIYYSNRSL-----SYLRTECYGYA 63 Query: 114 ASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + + + +Y+ YY S + K L+ +V N Sbjct: 64 LADATRALEL-----DKNYLKGYYRRATSNMAL--------GKFKAALKDYETVVRVRPN 110 Query: 172 SPYVKGARFYVTVGRNQLAAKEVE 195 A+ + K E Sbjct: 111 DK---DAKMKYQECNKIVKQKAFE 131 >gi|119513238|ref|ZP_01632282.1| TPR repeat protein [Nodularia spumigena CCY9414] gi|119462105|gb|EAW43098.1| TPR repeat protein [Nodularia spumigena CCY9414] Length = 727 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 48/144 (33%), Gaps = 9/144 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D + Y+ + +++ +A + F+Q P + ++ + +Y+ Sbjct: 446 KPPEDTLSFADYYKAGHAAYQIRDYDQAVKKFSQAIEQQPTSS---RAYVNRGNARYNLR 502 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 Y+ A + + PE + G + M R +L + ++ + Sbjct: 503 DYEGALKDYNQALEINPEEVK---AFVNRGNARYMMAEYSHDPDREYQLAIADFNQALGI 559 Query: 169 YTNSPYVKGARFYVTVGRNQLAAK 192 + A + R+++A Sbjct: 560 ---NKQEIEAYIRRGIVRSKMARY 580 >gi|50084561|ref|YP_046071.1| putative signal peptide [Acinetobacter sp. ADP1] gi|49530537|emb|CAG68249.1| conserved hypothetical protein; putative signal peptide [Acinetobacter sp. ADP1] Length = 275 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 42/119 (35%), Gaps = 17/119 (14%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209 Q K + M ++ + NS Y A F++ + L Y A Sbjct: 171 QGGAKKAIAPMQNFIKNHPNSIYTGNAYFWL--------------AEFNLATDPVNYTEA 216 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVE 267 + +V+ Y + A ++ +L A A ++ + + + YPQ +Y + Sbjct: 217 KKNYDIVVKRYPTSSKAPRSLYQLYSIAKDVEHNSAVANQLKAKLLKTYPQSEEVKYFK 275 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 52/143 (36%), Gaps = 12/143 (8%) Query: 39 ERQSSRDVYLDSVTDVRY---QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 + +S+ D+VT ++ Y A+ K+ KA ++ P + Sbjct: 137 AQDNSQPASTDNVTHQDPVELEKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSIYTGN 196 Query: 96 SLLMSAFVQYSAG--KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 + A + Y +A + + +YP S Y + + +DV + Sbjct: 197 AYFWLAEFNLATDPVNYTEAKKNYDIVVKRYPTSSKAPRSLYQL----YSIAKDVEH--- 249 Query: 154 ATKLMLQYMSRIVERYTNSPYVK 176 + + Q +++++ Y S VK Sbjct: 250 NSAVANQLKAKLLKTYPQSEEVK 272 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 18/124 (14%), Positives = 39/124 (31%), Gaps = 23/124 (18%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163 Y G ++A + + +I +P S G +Y + ++ D + Sbjct: 169 YKQGGAKKAIAPMQNFIKNHPNSIYT-------GNAYFWLAEFNLATDPVNYTEAKKNYD 221 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ-LVLANYSD 222 +V+RY S + + + I + A + + +L Y Sbjct: 222 IVVKRYPTSSKAPRSLYQL-----------YSIAK---DVEHNSAVANQLKAKLLKTYPQ 267 Query: 223 AEHA 226 +E Sbjct: 268 SEEV 271 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG--EEYITQYPESKN 129 N+++A + ++ + +P + A +SL + ++ A + + + YP+S+ Sbjct: 212 NYTEAKKNYDIVVKRYPTSSKAPRSLYQL-YSIAKDVEHNSAVANQLKAKLLKTYPQSEE 270 Query: 130 VDY 132 V Y Sbjct: 271 VKY 273 >gi|160898837|ref|YP_001564419.1| tol-pal system protein YbgF [Delftia acidovorans SPH-1] gi|160364421|gb|ABX36034.1| tol-pal system protein YbgF [Delftia acidovorans SPH-1] Length = 260 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 48/137 (35%), Gaps = 8/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 ++ +E A+ + +F++A F+ +P +G + QY+ Sbjct: 132 EFAADPAEKRDFEAALAQFRAGSFAEAGTAFSSFLNQWPKSGYVPSARFWLGNAQYANRN 191 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ A + + P +S I + + + TK + + +++ Y Sbjct: 192 YKDAITNFRALLAAAPMHGRAPEA----ALS----IANCQIEMKDTKGARKTLEDLIKAY 243 Query: 170 TNSPYVKGARFYVTVGR 186 N+ A+ + + Sbjct: 244 PNAEATAAAKNRLASLK 260 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 46/142 (32%), Gaps = 22/142 (15%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A K +A Q+ AG + +A + ++ Q+P+S V + +G + Sbjct: 138 AEKRDFEAALAQFRAGSFAEAGTAFSSFLNQWPKSGYVPSARFWLGNAQYAN-------- 189 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R K + ++ A + + ++ + A Sbjct: 190 RNYKDAITNFRALLAAAPMHGRAPEAALSIANCQ--------------IEMKDTKGARKT 235 Query: 213 FQLVLANYSDAEHAEEAMARLV 234 + ++ Y +AE A RL Sbjct: 236 LEDLIKAYPNAEATAAAKNRLA 257 >gi|91203212|emb|CAJ72851.1| hypothetical protein kustd2106 [Candidatus Kuenenia stuttgartiensis] Length = 360 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 14/93 (15%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A+ Y GK ++ L E+ IT P ++ +G Y + Q + ++ Sbjct: 37 AYNLYKLGKLDESLVLLEKVITLNPNHPE---AHFGMGSIYFR--------QEKFQKAVE 85 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 +++ E N YV A + + +L E Sbjct: 86 AFTKVTEIKPN--YV-EAYQRLWLAYKKLGMSE 115 >gi|308163061|gb|EFO65424.1| Protein F54C1.5 [Giardia lamblia P15] Length = 673 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 8/77 (10%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 +++Q + +A E P A SLL AF YSAG Y+ A +L +E ++P S Sbjct: 18 IRDQEWDQAIEILKDQLAQHPGNR-AALSLL--AFCNYSAGNYEDAVNLYQELCQRHPTS 74 Query: 128 KNVDYVYYLVGMSYAQM 144 + Y + ++ A++ Sbjct: 75 ER-----YQLALANARL 86 >gi|225872986|ref|YP_002754445.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC 51196] gi|225793617|gb|ACO33707.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC 51196] Length = 782 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 58/191 (30%), Gaps = 34/191 (17%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + L +Q + +A F Q ++ P ++ Y+ KY +AA + + Sbjct: 564 GITLLSQQQYGEAVYAFEQVAKMRP--DY-DRAWANIGIAYYNWEKYPEAAQYLAKALAM 620 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 P+S Y +++ +Q + + + + S + Sbjct: 621 NPDSART---LYWQALTF--------RNQAKVPEAIADLKKAATLFPLS---SDIHRELG 666 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 Y ++ EY A ++Q V + + A L Y L Sbjct: 667 FS--------------YYQQHEYKLAEAQYQTVQSINPNDLAAH---YILGIVYSRLGNR 709 Query: 244 DEAREVVSLIQ 254 EA + L Sbjct: 710 AEAAKQEKLFA 720 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 6/92 (6%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + R +Y +A+ F + +A + + FP + + F Y +Y+ Sbjct: 621 NPDSARTLYWQALTFRNQAKVPEAIADLKKAATLFPLSSDIHR---ELGFSYYQQHEYKL 677 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A + + + P +Y++G+ Y+++ Sbjct: 678 AEAQYQTVQSINPNDLA---AHYILGIVYSRL 706 >gi|15834680|ref|NP_296439.1| type III secretion chaperone, putative [Chlamydia muridarum Nigg] gi|270284846|ref|ZP_06194240.1| type III secretion chaperone, putative [Chlamydia muridarum Nigg] gi|270288874|ref|ZP_06195176.1| type III secretion chaperone, putative [Chlamydia muridarum Weiss] gi|301336225|ref|ZP_07224427.1| type III secretion chaperone, putative [Chlamydia muridarum MopnTet14] gi|8163117|gb|AAF73524.1| type III secretion chaperone, putative [Chlamydia muridarum Nigg] Length = 335 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 54/148 (36%), Gaps = 17/148 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + +Y KAV+ ++ A + + P K+ + ++ + + Sbjct: 141 DPWNPQSLYNKAVILSDMEDEEGAIDLLESTVKRNPL-YW--KAWVKLGYLLSRNKMWDR 197 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A E + P ++ +Y +G+ Y + + T+L L+ ++ NS Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQESLQL--NS 244 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYY 200 A FY+ + L E+ +Y Sbjct: 245 EDA-DAHFYIGLAHMDLKQNELAYDAFY 271 >gi|149177139|ref|ZP_01855746.1| hypothetical protein PM8797T_27065 [Planctomyces maris DSM 8797] gi|148844031|gb|EDL58387.1| hypothetical protein PM8797T_27065 [Planctomyces maris DSM 8797] Length = 1215 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 64/192 (33%), Gaps = 33/192 (17%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS---AGKYQQ---AA 114 ++ AV ++ +S+A + F ++ + A ++ +M + +G Sbjct: 288 FDAAVQEMEAGKYSQAIQLFEHFLENYNKSDYADEARIMLSESLVEKEISGSTPAWSRGL 347 Query: 115 SLGEEYIT----------QYPESKNVDYVYYLVGM-SYAQMIRDVPYDQRATKLMLQYMS 163 ++I YP VDY + + + R D Sbjct: 348 EATNQFIKKHRDDSDFKVLYPT--LVDYGQ-RIALGAVETASRTKERDLLVVS---SNAE 401 Query: 164 RIVERY--TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 +I+ RY ++P A + G + A E+ L++ + A+ + + + Sbjct: 402 KILTRYSPPDAP-PADALARIKAGYEK-AEAEI------LRKEVFDVAVNQIEESIKQKK 453 Query: 222 DAEHAEEAMARL 233 + E+ L Sbjct: 454 TLQALEQRRHLL 465 >gi|78356623|ref|YP_388072.1| TPR domain-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219028|gb|ABB38377.1| TPR domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 263 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 22/132 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ V + ++ DFP +G+A + Y +Y +A +E Sbjct: 147 YQAGVKAVMNEDVKTGRSILEAFLADFPKSGLAPNASYWLGETYYHEKRYAEAILTFKEV 206 Query: 121 ITQYPESKNVD-------YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + YP+ + Y Y ++G D+ + Y+ +V+ Y+ S Sbjct: 207 VRNYPKHEKAAAAMLKTGYAYEMLG------------DKSNARF---YLQTLVDEYSASE 251 Query: 174 YVKGARFYVTVG 185 AR + Sbjct: 252 PAALARKRLKSL 263 Score = 43.2 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 34/105 (32%), Gaps = 14/105 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 K + + + S A +++ G Y Y AI Sbjct: 157 EDVKTGRSILEAFLADFPKSGLAPNASYWL--------------GETYYHEKRYAEAILT 202 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 F+ V+ NY E A AM + AY L AR + + + Y Sbjct: 203 FKEVVRNYPKHEKAAAAMLKTGYAYEMLGDKSNARFYLQTLVDEY 247 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 29/85 (34%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D Y + E+ +++A F + R++P A ++L + + G Sbjct: 172 DFPKSGLAPNASYWLGETYYHEKRYAEAILTFKEVVRNYPKHEKAAAAMLKTGYAYEMLG 231 Query: 109 KYQQAASLGEEYITQYPESKNVDYV 133 A + + +Y S+ Sbjct: 232 DKSNARFYLQTLVDEYSASEPAALA 256 >gi|210617644|ref|ZP_03291675.1| hypothetical protein CLONEX_03899 [Clostridium nexile DSM 1787] gi|210149191|gb|EEA80200.1| hypothetical protein CLONEX_03899 [Clostridium nexile DSM 1787] Length = 446 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 43/116 (37%), Gaps = 9/116 (7%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR--EVYEKAVLFLKEQNFS 74 Y ++ T + ++ + Y + +++ ++ ++Y A + +N+ Sbjct: 312 YNQNNYSTTNLIDELLALSTDSLGEAGKAQYDEMTSEIFPKQCDKLYRSARQSYRVENYG 371 Query: 75 KAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 A E + + + K+LL+ A G ++A I +P+S Sbjct: 372 TAIESLEKVMKMNESYEDG----KALLLLADSYAGNGDTEKATEKYNRVIELFPDS 423 >gi|126733170|ref|ZP_01748917.1| hypothetical protein RCCS2_03424 [Roseobacter sp. CCS2] gi|126716036|gb|EBA12900.1| hypothetical protein RCCS2_03424 [Roseobacter sp. CCS2] Length = 186 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 39/134 (29%), Gaps = 20/134 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG--VARKSLLMSAFVQYSAGKYQQAASL 116 + + L++ A E+F P F+ R A Y G A Sbjct: 69 LLRRGKDALEDGQPDVAAEHFTALIDHAPDFSEGYYGR------ASSYYLLGLTGPALDD 122 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 +T P + G++ P D L+ I+ + NS V Sbjct: 123 IRRALTLNPRHFEA-----MRGLAIIMEELQRPDD------ALELYEMILTMHPNSQDVL 171 Query: 177 GARFYVTVGRNQLA 190 + + + LA Sbjct: 172 VSVDRLKLQLEGLA 185 >gi|73670079|ref|YP_306094.1| TPR repeat-containing protein [Methanosarcina barkeri str. Fusaro] gi|72397241|gb|AAZ71514.1| TPR repeat [Methanosarcina barkeri str. Fusaro] Length = 927 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 65/211 (30%), Gaps = 36/211 (17%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K + N+ +A +N+ +P + Y++G Y++A + Sbjct: 190 YNKGSALQELGNYQEAITAYNKAIEIYP--EYKE-AWYKKGLAFYNSGNYEEAVKACNKT 246 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I P++ V + G + +++ + + + + +E + Sbjct: 247 IELDPQNPRV-WAN--KGNALSKL--------NSYEEAITAYNESIELDPQNSVAW---- 291 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 N L + G Y AI + + EA++ A + Sbjct: 292 ------NGLG---FAVA----SSGNYEEAIKFYNKAIEI---DPQNSEALSNKGFALYNV 335 Query: 241 ALMDEAREVVSLIQERYPQG--YWARYVETL 269 +EA + + E PQ W L Sbjct: 336 GNREEAIKALDKAIEVNPQNAVAWYDKGSIL 366 Score = 42.8 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 67/217 (30%), Gaps = 41/217 (18%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + N+ +A +++ P A + Y++A + I Sbjct: 83 RGDALANSGNYKEAINAYDKAIELDPQNPEAWN---NKGVALSNLSNYEEAIKAYNKAIE 139 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 P++ +Y G + ++ + +A K L+ +E Sbjct: 140 LDPQNSLF---WYNKGKTLYELGKQEE-STKAYKESLEASENAIELDP------------ 183 Query: 183 TVGRNQLAAKEVEIGRYYLK------RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 RN LA +Y K G Y AI + + Y + +EA + A Sbjct: 184 ---RNSLA--------WYNKGSALQELGNYQEAITAYNKAIEIYPE---YKEAWYKKGLA 229 Query: 237 YVALALMDEAREVVSLIQERYPQGY--WARYVETLVK 271 + +EA + + E PQ WA L K Sbjct: 230 FYNSGNYEEAVKACNKTIELDPQNPRVWANKGNALSK 266 >gi|89271364|emb|CAJ83503.1| protein phosphatase 5, catalytic subunit [Xenopus (Silurana) tropicalis] Length = 511 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 50/162 (30%), Gaps = 25/162 (15%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 F++ + ++ +++ + E+ E+A + + +++ +A +Y+ Q Sbjct: 11 FTVTGSGNMAEAERAEEAGGEPTISREKTAEELKEQANEYFRVKDYDRAVQYYTQAIGLS 70 Query: 88 PFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQ 143 P +SL Y A + I + Y+ YY S Sbjct: 71 PDTAIYYGNRSL-----AYLRTECYGYALADASRAIQL-----DAKYIKGYYRRAASNMA 120 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + K L+ +V+ + A+ Sbjct: 121 L--------GKLKAALKDYETVVKVRPHDK---DAQMKFQEC 151 >gi|313681408|ref|YP_004059146.1| hypothetical protein [Sulfuricurvum kujiense DSM 16994] gi|313154268|gb|ADR32946.1| Tetratricopeptide TPR_1 repeat-containing protein [Sulfuricurvum kujiense DSM 16994] Length = 785 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 72/201 (35%), Gaps = 26/201 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + +N+ K + +++P + +L + G++++ +L + + Sbjct: 180 YMEMKKAYAAKNYIKVIDRAENTLKEYPNTVFKNELMLYQIRSYHQLGEFEKVLALSKRF 239 Query: 121 ITQYPESKNVDYVYYLVGMSYAQ--MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + ++ + V +Y++ I D Y + R+ + +SP+ Sbjct: 240 LREFSSDPGLAEVLTYTANAYSKIGQITDADY----------FFDRLFDEQGDSPFAPQG 289 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + QL GE A ++ L++ +D A +A +L ++ + Sbjct: 290 ---MIYKAEQLETN-----------GEPKKAAQYYKKALSSTTDVAIASKAAFKLAQSEL 335 Query: 239 ALALMDEAREVVSLIQERYPQ 259 + +A + V I P Sbjct: 336 MSGDVQKAAQYVDKIITVNPD 356 >gi|296415257|ref|XP_002837308.1| hypothetical protein [Tuber melanosporum Mel28] gi|295633169|emb|CAZ81499.1| unnamed protein product [Tuber melanosporum] Length = 476 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 18/129 (13%), Positives = 39/129 (30%), Gaps = 21/129 (16%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASL 116 E+ K + +++ A +++ Q P + ++ Y A Sbjct: 10 ELKAKGNAAIASRDWKTAVDFYTQAIELDPNQALFYSNRAQ-----AHIRMEAYGSAIED 64 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + I P S YY +S +++ K L+ + ++ N Sbjct: 65 AAKAIEIDPASVK---AYYRRAISNVALLK--------YKEALKDFRTVCKKAPNDK--- 110 Query: 177 GARFYVTVG 185 AR + Sbjct: 111 DARLKMNEC 119 >gi|261365081|ref|ZP_05977964.1| putative periplasmic protein [Neisseria mucosa ATCC 25996] gi|288566506|gb|EFC88066.1| putative periplasmic protein [Neisseria mucosa ATCC 25996] Length = 244 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 44/123 (35%), Gaps = 11/123 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 + +YE+A + + N+ A + + +AR+++ + Q G + + Sbjct: 125 ETRLYERASKYYRSGNYRAAAAILKEADGGN-GSDIARRNMYLLLQSQQRMGHCESVIEI 183 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 G Y ++ S + +G Q +D+ ++++ Y S Sbjct: 184 GGRYANRFRSSPQAPDALFSIGQCQYQLQQKDIAR---------NTWRKLIQSYPGSEAA 234 Query: 176 KGA 178 K A Sbjct: 235 KRA 237 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 7/62 (11%) Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 RF+ + A +A+ + + L D AR + + YP A+ Sbjct: 188 ANRFRS-------SPQAPDALFSIGQCQYQLQQKDIARNTWRKLIQSYPGSEAAKRAAIS 240 Query: 270 VK 271 +K Sbjct: 241 IK 242 >gi|257458356|ref|ZP_05623504.1| TPR domain protein [Treponema vincentii ATCC 35580] gi|257444291|gb|EEV19386.1| TPR domain protein [Treponema vincentii ATCC 35580] Length = 664 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 60/159 (37%), Gaps = 30/159 (18%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-SAFVQYSAGKYQQAAS 115 +++E+ +N+ A E + Q ++ P A ++ A Y+ G+Y QA Sbjct: 22 PIQLFEEGKELQYHENWYGAIELYQQALKENP----AYNAVYRGLAECFYALGEYDQAIV 77 Query: 116 LGEEYITQYPESKNVD--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 E P+ +++ Y + L+G+ + + S I+ RY N+ Sbjct: 78 YAERARRYSPQDVDIENLYAFILIGI-------------GRIEEAQKIFSGILNRYPNN- 123 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 ARF + EV GR Y AA+ R Sbjct: 124 --LDARFGMAEI-------EVTGGRLTNASELYAAALRR 153 >gi|299769711|ref|YP_003731737.1| hypothetical protein AOLE_07365 [Acinetobacter sp. DR1] gi|298699799|gb|ADI90364.1| hypothetical protein AOLE_07365 [Acinetobacter sp. DR1] Length = 287 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 17/120 (14%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209 Q K + M ++ + NS Y A F++ + L Y A Sbjct: 182 QGGAKKAIAPMQNFIKNHPNSVYTGNAYFWL--------------AEFNLATDPVNYNEA 227 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + +V Y ++ A A+ +L A A + + I +YP+ A++ Sbjct: 228 KKNYNVVATRYPNSSKAPRALYQLYSIAKDVDKNPASANQYKTKILSQYPKSEEAKFFNK 287 Score = 42.4 bits (99), Expect = 0.063, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 23/124 (18%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163 Y G ++A + + +I +P S VY G +Y + ++ D + + Sbjct: 180 YKQGGAKKAIAPMQNFIKNHPNS-----VY--TGNAYFWLAEFNLATDPVNYNEAKKNYN 232 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL-VLANYSD 222 + RY NS A + + I + + A+ +++ +L+ Y Sbjct: 233 VVATRYPNSSKAPRALYQL-----------YSIAK---DVDKNPASANQYKTKILSQYPK 278 Query: 223 AEHA 226 +E A Sbjct: 279 SEEA 282 Score = 42.4 bits (99), Expect = 0.073, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 48/138 (34%), Gaps = 9/138 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 ++S+ + + ++ Y A+ K+ KA ++ P + + Sbjct: 153 EASQPPSQNQSNPIELEKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSVYTGNAYFWL 212 Query: 101 AFVQYSAG--KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A + Y +A T+YP S Y + + +DV + + Sbjct: 213 AEFNLATDPVNYNEAKKNYNVVATRYPNSSKAPRALYQL----YSIAKDVDKNPAS---A 265 Query: 159 LQYMSRIVERYTNSPYVK 176 QY ++I+ +Y S K Sbjct: 266 NQYKTKILSQYPKSEEAK 283 >gi|77919112|ref|YP_356927.1| N-acetylmuramoyl-L-alanine amidase [Pelobacter carbinolicus DSM 2380] gi|77545195|gb|ABA88757.1| N-acetylmuramoyl-L-alanine amidase [Pelobacter carbinolicus DSM 2380] Length = 577 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 35/98 (35%), Gaps = 14/98 (14%) Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 YP D Y+ G + ++ + + + + L++ R+ ++Y S A Sbjct: 68 YPRHGRADDALYMGGKA-SEGLYAISRRKGDARQALEFYDRLAKKYPTSNLADDA----C 122 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 ++ ++ + YV R++ + + Sbjct: 123 YLAGRILEHNLD-----NRSEAYV----RYKQGVDKHP 151 Score = 42.0 bits (98), Expect = 0.093, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 10/128 (7%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 ++ ++ L IF + + + V R++ + L +N+ + Sbjct: 2 KVLRYFLAIFLILLPVLPAFAAADAGERAF---VHAKAEYRQLQNSSKGKLYRENWEQVI 58 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFV---QY----SAGKYQQAASLGEEYITQYPESKNV 130 + F + + +P G A +L M Y G +QA + +YP S Sbjct: 59 QGFKKVAESYPRHGRADDALYMGGKASEGLYAISRRKGDARQALEFYDRLAKKYPTSNLA 118 Query: 131 DYVYYLVG 138 D YL G Sbjct: 119 DDACYLAG 126 >gi|322378669|ref|ZP_08053102.1| paralysed flagella protein [Helicobacter suis HS1] gi|321148886|gb|EFX43353.1| paralysed flagella protein [Helicobacter suis HS1] Length = 765 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 38/124 (30%), Gaps = 9/124 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-YSAGKYQQAASLGEE 119 Y + + +A E + +P + + K + + Sbjct: 165 YLNTKRLIDNGYYMEALESIVNILKLYPDTLFRKDLYFYEITALSHLKKKQDLVIQVASQ 224 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I YP V V Y +G +Y I +P RI+E Y S Y ++ Sbjct: 225 WIKLYPSDPQVPSVLYALGNAY-SQINYMP-------QAASTFKRIIEEYPKSRYSPLSQ 276 Query: 180 FYVT 183 + Sbjct: 277 MRLA 280 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 37/113 (32%), Gaps = 13/113 (11%) Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D L+ + I++ Y ++ + K FY + L K+ + I Sbjct: 173 DNGYYMEALESIVNILKLYPDTLFRKDLYFYEITALSHLKKKQDLV-------------I 219 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + Y + L AY + M +A I E YP+ ++ Sbjct: 220 QVASQWIKLYPSDPQVPSVLYALGNAYSQINYMPQAASTFKRIIEEYPKSRYS 272 >gi|15645888|ref|NP_208066.1| paralysed flagella protein (pflA) [Helicobacter pylori 26695] gi|2314439|gb|AAD08318.1| paralysed flagella protein (pflA) [Helicobacter pylori 26695] Length = 801 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 186 PLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTMFKKDLYLLEIIALGQLG 245 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP N+ Y V + + K ++Y RI+ Sbjct: 246 IKKSLLIDIGTQWIKNYPTDPNIPEALYYVAKALDEN--------NHYKQAMRYYKRILL 297 Query: 168 RYTNSPYVKGARFYVTV 184 Y NS Y A+ + + Sbjct: 298 EYKNSRYAPLAQMRLAI 314 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 12/99 (12%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 215 RTISRAFKNYPQTMFKKDLYLLEIIALGQLGIKKSLLIDIGTQWIKNYPTDPNIPEALYY 274 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + ++ +A Y+ + ++ + A + + A Sbjct: 275 VAKALDENNHYKQAMRYYKRILLEYKNSRYAPLAQMRLA 313 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 37/113 (32%), Gaps = 13/113 (11%) Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D +A L+ +SR + Y + + K +A ++ I + L I Sbjct: 206 DSQAYFDALRTISRAFKNYPQTMFKKD-----LYLLEIIALGQLGIKKSLL--------I 252 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + NY + EA+ + +A +A I Y +A Sbjct: 253 DIGTQWIKNYPTDPNIPEALYYVAKALDENNHYKQAMRYYKRILLEYKNSRYA 305 >gi|325192791|emb|CCA27195.1| serine/threonineprotein phosphatase 5 putative [Albugo laibachii Nc14] Length = 493 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 43/164 (26%), Gaps = 36/164 (21%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLMSAFVQYSAG 108 S R + + L+E + A E + +P A A ++ Sbjct: 13 SEESKREADSLKNEGNQSLQEYKYRNAVELYTAAIEIYPTAIYYANRAA-----AHMKTE 67 Query: 109 KYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y A I P Y YY G K L+ +V Sbjct: 68 SYGLAIKDATNAIGMDPN-----YVKAYYRRG--------SAELALGHYKAALKNFRLVV 114 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 + AR + ++L +K + AAI Sbjct: 115 QMKPQDK---DARMKYKLC-DKL-----------VKEAAFAAAI 143 >gi|183598190|ref|ZP_02959683.1| hypothetical protein PROSTU_01568 [Providencia stuartii ATCC 25827] gi|188020356|gb|EDU58396.1| hypothetical protein PROSTU_01568 [Providencia stuartii ATCC 25827] Length = 255 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 41/112 (36%), Gaps = 14/112 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + ++ Y S Y A +++ Y K + AA F V Sbjct: 153 EAIGALQSFIKSYPKSSYQSNANYWLGQLN-------------YNKGSKDDAAFY-FATV 198 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + Y ++ + EA+ ++ D+A+ V + ++YP A+ E Sbjct: 199 VKEYPKSQKSSEALYKVGLIMQDKGQKDKAKAVYQQVLKQYPNSAGAKLAEK 250 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 47/130 (36%), Gaps = 12/130 (9%) Query: 57 QREVYEKAVL-FLKEQ---NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 ++E Y AV +K + +A + +P + + + Y+ G Sbjct: 131 EKEDYNAAVALAMKSKSKAQIDEAIGALQSFIKSYPKSSYQSNANYWLGQLNYNKGSKDD 190 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 AA + +YP+S+ Y VG+ + D+ +++++Y NS Sbjct: 191 AAFYFATVVKEYPKSQKSSEALYKVGL--------IMQDKGQKDKAKAVYQQVLKQYPNS 242 Query: 173 PYVKGARFYV 182 K A + Sbjct: 243 AGAKLAEKKL 252 >gi|212535628|ref|XP_002147970.1| serine/threonine protein phosphatase PPT1 [Penicillium marneffei ATCC 18224] gi|210070369|gb|EEA24459.1| serine/threonine protein phosphatase PPT1 [Penicillium marneffei ATCC 18224] Length = 478 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 15/143 (10%), Positives = 45/143 (31%), Gaps = 27/143 (18%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K + ++ A +++ Q + P + + ++ Y A + + Sbjct: 15 KGNAAFAKHDWPTAIDFYTQAIDQYDKEP-SFFSNRAQ-----AHIKMEAYGYAIADATK 68 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P + Y+ ++ ++ + L+ +++R N+ A+ Sbjct: 69 ALELDPTNVK---AYWRRALANTAILN--------PRAALKDFKSVIKREPNNQ---TAK 114 Query: 180 FYVTVG----RNQLAAKEVEIGR 198 + R K +E+ Sbjct: 115 LRLVECEKLVRRMDFEKAIEVAE 137 >gi|331092380|ref|ZP_08341206.1| hypothetical protein HMPREF9477_01849 [Lachnospiraceae bacterium 2_1_46FAA] gi|330401404|gb|EGG80990.1| hypothetical protein HMPREF9477_01849 [Lachnospiraceae bacterium 2_1_46FAA] Length = 449 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 7/77 (9%) Query: 61 YEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y A+ + +N++ A + K+LL A AGK +QA + Sbjct: 359 YRLAIRNYEVKNYTTAVTALEFVTSIDEKYEDG----KALLNLAKAYEKAGKTEQAKTTY 414 Query: 118 EEYITQYPESKNVDYVY 134 + YP+S+ Sbjct: 415 KRVAELYPDSELASQAQ 431 >gi|328948172|ref|YP_004365509.1| hypothetical protein Tresu_1304 [Treponema succinifaciens DSM 2489] gi|328448496|gb|AEB14212.1| hypothetical protein Tresu_1304 [Treponema succinifaciens DSM 2489] Length = 497 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 18/106 (16%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 LL +A +++ KY+ + + E + + +D +L I + +R K Sbjct: 408 LLKAAQEYFNSKKYKDSLACLESFFEK--TDSRIDEGLFLQA-----QIFESNSSERNIK 460 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 L I+ RY SP K A VT + ++Y Sbjct: 461 SALDNYETIIRRYPQSPIWKKASERVTYLK-----------KFYFN 495 >gi|326795241|ref|YP_004313061.1| tol-pal system protein YbgF [Marinomonas mediterranea MMB-1] gi|326546005|gb|ADZ91225.1| tol-pal system protein YbgF [Marinomonas mediterranea MMB-1] Length = 270 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 47/128 (36%), Gaps = 22/128 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 K+++AA ++++ YP + +Y +G ++ + L + + Sbjct: 161 REKKFEEAAQAFDDFVLVYPSNTLTGNAHYWLG--------ELKLVLGKPEEALNEFNMV 212 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V ++ N V A + + + +QL KE A Q V++ +S Sbjct: 213 VTQFPNHSKVADATYKLGIVNDQLGNKE--------------EAKQFLQKVVSQFSGTNS 258 Query: 226 AEEAMARL 233 A A L Sbjct: 259 ATLAAGYL 266 Score = 42.8 bits (100), Expect = 0.057, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 37/105 (35%), Gaps = 14/105 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + + Q V Y ++ A +++ + L G+ A+ Sbjct: 163 KKFEEAAQAFDDFVLVYPSNTLTGNAHYWLGELKLVL--------------GKPEEALNE 208 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 F +V+ + + +A +L L +EA++ + + ++ Sbjct: 209 FNMVVTQFPNHSKVADATYKLGIVNDQLGNKEEAKQFLQKVVSQF 253 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 43/103 (41%), Gaps = 8/103 (7%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 ++E+ F +A + F+ +P + + ++ GK ++A + +TQ+P Sbjct: 159 LIREKKFEEAAQAFDDFVLVYPSNTLTGNAHYWLGELKLVLGKPEEALNEFNMVVTQFPN 218 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 V Y +G+ Q+ + Q++ ++V ++ Sbjct: 219 HSKVADATYKLGIVNDQL--------GNKEEAKQFLQKVVSQF 253 >gi|268326188|emb|CBH39776.1| hypothetical secreted protein, containing tetratricopeptide repeats [uncultured archaeon] Length = 476 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 35/115 (30%), Gaps = 8/115 (6%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +++ + + N+ A FN+ P + G A Sbjct: 30 EQQYIDLGKAEYQGANYDAAIYLFNKAVDLNPDNEYLYN---DLGLCYVALGDMDLAIPE 86 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + I + + YY G++Y + + D + S+++E N Sbjct: 87 FSKAIEL---NSDCVEAYYNRGLAYFEQGKQNRTDPND--KAIAEFSKVIELDPN 136 >gi|39996532|ref|NP_952483.1| TPR domain protein [Geobacter sulfurreducens PCA] gi|39983413|gb|AAR34806.1| TPR domain protein [Geobacter sulfurreducens PCA] gi|298505548|gb|ADI84271.1| TPR domain protein [Geobacter sulfurreducens KN400] Length = 573 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 72/240 (30%), Gaps = 37/240 (15%) Query: 23 ALTIFFSIAVCFLVGWERQ-SSRDVYLDSVTDVRYQREVY--EKAVLFLKEQNFSKAYEY 79 LT+F I C G + D+ R +Y +A L L E + A Sbjct: 9 LLTLFLVIPGCATSGAVGALPVNEASFKPTVDIAGSRALYIFARARLQLLEGDVDGALTL 68 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 N P + + A + G+ + A E I P + L G Sbjct: 69 LNGAIEADPGSAYLHTA---VAEIYMKTGRAEDALKACENAIRLDPSYRQ---ARLLAGA 122 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 A + RD + + ++ + +E + + + Sbjct: 123 ILASLKRD--------RDAVPHLEKAIELDPSREEAY-----------------IHLAVS 157 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YLK EY A+ + ++ ++ L +AY + L EA E P Sbjct: 158 YLKLFEYEKAVNTLKSLVKVKPESSLGY---YYLGKAYDQMKLQKEAANYYKKAIELKPD 214 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 65/206 (31%), Gaps = 35/206 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 +++++ + + +A F P A + A +Y +A EE+ Sbjct: 291 GLIYMESERYDEAIAEFRDILEREPN---ALQVRFYLATAFEEKEEYDRAL---EEFGRI 344 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN----SPYVKGAR 179 P S N Y + + I D + + + + Y + Y+ G Sbjct: 345 PPGSFN-----YFEAVGHMAFIH---KDMGNPEKGIAVLKDAIAAYPSHLELHLYLAGLY 396 Query: 180 FYVTVGRNQLA-------------AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + LA +G Y K G +I R + VL D Sbjct: 397 ESLDHYTEGLAVLKAVEGDFGGDPRLHFRMGTLYDKMGNKDESIARMKKVLTIAPD---D 453 Query: 227 EEAMARLVEAYVALALM-DEAREVVS 251 +A+ L Y L + DEA + + Sbjct: 454 AQALNYLGYTYAELGIKLDEALQYLR 479 >gi|290975181|ref|XP_002670322.1| predicted protein [Naegleria gruberi] gi|284083879|gb|EFC37578.1| predicted protein [Naegleria gruberi] Length = 3323 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 46/117 (39%), Gaps = 18/117 (15%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D+ ++ ++++ + +++ + +A + + PF K ++ A Y Y+Q Sbjct: 632 DLFFEEYLFKEIDVNMEQSDCDQAIDLLKKVISFEPFG---VKYIIALADAFYLKTDYKQ 688 Query: 113 AASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 ++ + VDY YY++G Y R +++ + VE Sbjct: 689 CVKYAKKVLEM-----AVDYWKAYYIIGSCYLAK--------RKVTKAIEFFGQGVE 732 >gi|71909660|ref|YP_287247.1| hypothetical protein Daro_4051 [Dechloromonas aromatica RCB] gi|71849281|gb|AAZ48777.1| conserved hypothetical protein [Dechloromonas aromatica RCB] Length = 243 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 45/145 (31%), Gaps = 8/145 (5%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + D + + YE A+ K + +A F + +P + +A + Sbjct: 105 AGDTPNGTVAKPAVDPAKESQDYEAALNQFKAGKYKEAAVGFGAFVQKYPDSSLAPNAQY 164 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 Y+ ++A T+Y ES + I + Sbjct: 165 WLGNAWYAQRDCKRAIEAQSLVTTKYAESAKAPDAW--------LAISTCQQEMGNPTGA 216 Query: 159 LQYMSRIVERYTNSPYVKGARFYVT 183 + + ++ +Y ++P AR + Sbjct: 217 KRSLETVIAKYPSAPAADTARERLK 241 >gi|322379672|ref|ZP_08053990.1| paralysed flagella protein [Helicobacter suis HS5] gi|321147908|gb|EFX42490.1| paralysed flagella protein [Helicobacter suis HS5] Length = 768 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 38/124 (30%), Gaps = 9/124 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-YSAGKYQQAASLGEE 119 Y + + +A E + +P + + K + + Sbjct: 168 YLNTKRLIDNGYYMEALESIVNILKLYPDTLFRKDLYFYEITALSHLKKKQDLVIQVASQ 227 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I YP V V Y +G +Y I +P RI+E Y S Y ++ Sbjct: 228 WIKLYPSDPQVPSVLYALGNAY-SQINYMP-------QAASTFKRIIEEYPKSRYSPLSQ 279 Query: 180 FYVT 183 + Sbjct: 280 MRLA 283 Score = 39.7 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 37/113 (32%), Gaps = 13/113 (11%) Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D L+ + I++ Y ++ + K FY + L K+ + I Sbjct: 176 DNGYYMEALESIVNILKLYPDTLFRKDLYFYEITALSHLKKKQDLV-------------I 222 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + Y + L AY + M +A I E YP+ ++ Sbjct: 223 QVASQWIKLYPSDPQVPSVLYALGNAYSQINYMPQAASTFKRIIEEYPKSRYS 275 >gi|68468381|ref|XP_721750.1| potential serine/threonine phosphatase [Candida albicans SC5314] gi|46443682|gb|EAL02962.1| potential serine/threonine phosphatase [Candida albicans SC5314] Length = 564 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 47/153 (30%), Gaps = 37/153 (24%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119 +K LK+ + +A E + + P + ++ + Y A + Sbjct: 12 DKGNNLLKQHKYDEAIEAYTKAIEIDPNNAIFYSNRAQVQI-----KLENYGLAIQDCDL 66 Query: 120 YITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 I ++++ YY G+S ++ K L+ I+++ N Sbjct: 67 VIKL-----DINFLKAYYRKGVSLMAILNH--------KQALENFKFILKKLPNDKLTLE 113 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 N YLKR + AI Sbjct: 114 NYK---QCTN------------YLKRQAFEKAI 131 >gi|315185944|gb|EFU19708.1| hypothetical protein SpithDRAFT_1587 [Spirochaeta thermophila DSM 6578] Length = 263 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 61/172 (35%), Gaps = 19/172 (11%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 R+S L + Y+ +Y+K L E ++ +FN +P + +L Sbjct: 82 ARESLEAFLLKGGSHPLYEEALYQKGRLLYLEGDYQSCISHFNAFLASYPTSQFVPNALY 141 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS------------------ 140 SA +S G + +A L E + Y S + Y + + Sbjct: 142 WSAESLFSLGHFTEARPLYEHIVENYRSSPKAEAARYRMELIEYAMREEELLRLLKWSHE 201 Query: 141 -YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Y ++ ++ +R+ K L + + + + V+ + + +L+ Sbjct: 202 EYLKLAEELNQKERSYKEALSIYQQKLNQVPSLEEVEALKARIKELEAELSR 253 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 48/147 (32%), Gaps = 8/147 (5%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 L S Y ++ + L + +A E + ++L + Y Sbjct: 54 LSSADSPVYLEALFWYGKICLTLGEYDEARESLEAFLLKGGSHPLYEEALYQKGRLLYLE 113 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G YQ S ++ YP S+ V Y S + IVE Sbjct: 114 GDYQSCISHFNAFLASYPTSQFVPNALYWSAESLFSL--------GHFTEARPLYEHIVE 165 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEV 194 Y +SP + AR+ + + + +E+ Sbjct: 166 NYRSSPKAEAARYRMELIEYAMREEEL 192 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 62/179 (34%), Gaps = 26/179 (14%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 +LL AFV AG+Y QA + ++ + D YL + + I + Sbjct: 29 ALLRHAFVLVKAGEYIQAKEVFSRLLS------SADSPVYLEALFWYGKICLTLGEYDEA 82 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + L+ + + + G+Y + I F Sbjct: 83 RESLEAFLLKGGSHPLYEEALYQKGRLLYLE-----------------GDYQSCISHFNA 125 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY---PQGYWARYVETLVK 271 LA+Y ++ A+ E+ +L EAR + I E Y P+ ARY L++ Sbjct: 126 FLASYPTSQFVPNALYWSAESLFSLGHFTEARPLYEHIVENYRSSPKAEAARYRMELIE 184 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 24/139 (17%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQYMSRIV 166 G+Y +A E ++ + + Y G + Y + + + + + + Sbjct: 77 GEYDEARESLEAFLLKGGSHPLYEEALYQKGRLLYLE---------GDYQSCISHFNAFL 127 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 Y S +V A ++ L G + A P ++ ++ NY + A Sbjct: 128 ASYPTSQFVPNALYWSAESLFSL--------------GHFTEARPLYEHIVENYRSSPKA 173 Query: 227 EEAMARLVEAYVALALMDE 245 E A R+ A+ + Sbjct: 174 EAARYRMELIEYAMREEEL 192 >gi|27366254|ref|NP_761782.1| tetratricopeptide repeat-containing protein [Vibrio vulnificus CMCP6] gi|37679487|ref|NP_934096.1| hypothetical protein VV1303 [Vibrio vulnificus YJ016] gi|320156763|ref|YP_004189142.1| heat shock protein YciM [Vibrio vulnificus MO6-24/O] gi|27362455|gb|AAO11309.1| predicted N-acetylglucosaminyl transferase [Vibrio vulnificus CMCP6] gi|37198231|dbj|BAC94067.1| predicted N-acetylglucosaminyl transferase [Vibrio vulnificus YJ016] gi|319932075|gb|ADV86939.1| heat shock (predicted periplasmic) protein YciM precursor [Vibrio vulnificus MO6-24/O] Length = 389 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 59/189 (31%), Gaps = 42/189 (22%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG------ 117 A ++ +A + F Q + P A L+ + ++ +A Sbjct: 114 AKDYMVSGFLDRAEKIFEQLVEE-PEHRDAALQQLVLIY--QQTREWDKAIHYAHLLVKT 170 Query: 118 -EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 ++ I KN+ +Y ++ + + + + ++ Sbjct: 171 GKKSIR-----KNI--AHYWCELAMLEQADGNKT------KSISHFKKALQEDPKCVRAS 217 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 + +GR YL+ EY I + VL DA+ EA+ L E Sbjct: 218 -----------------ISLGRIYLEMEEYRKTIEYLEHVLE--QDADFVSEALPILAEC 258 Query: 237 YVALALMDE 245 Y L D+ Sbjct: 259 YHHLGQEDQ 267 >gi|262279352|ref|ZP_06057137.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262259703|gb|EEY78436.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 287 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 17/120 (14%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209 Q K + M ++ + NS Y A F++ + L Y A Sbjct: 182 QGGAKKAIAPMQNFIKNHPNSVYTGNAYFWL--------------AEFNLATDPVNYNEA 227 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + +V Y ++ A A+ +L A A + + I +YP+ A++ Sbjct: 228 KKNYNVVATQYPNSSKAPRALYQLYSIAKDVDKNTASANQYKTKILSQYPKSEEAKFFNK 287 Score = 43.2 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 48/138 (34%), Gaps = 9/138 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 ++S+ + V ++ Y A+ K+ KA ++ P + + Sbjct: 153 EASQPPAQNQSNPVELEKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSVYTGNAYFWL 212 Query: 101 AFVQYSAG--KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A + Y +A TQYP S Y + + +DV + T Sbjct: 213 AEFNLATDPVNYNEAKKNYNVVATQYPNSSKAPRALYQL----YSIAKDVD---KNTASA 265 Query: 159 LQYMSRIVERYTNSPYVK 176 QY ++I+ +Y S K Sbjct: 266 NQYKTKILSQYPKSEEAK 283 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 46/124 (37%), Gaps = 23/124 (18%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163 Y G ++A + + +I +P S VY G +Y + ++ D + + Sbjct: 180 YKQGGAKKAIAPMQNFIKNHPNS-----VY--TGNAYFWLAEFNLATDPVNYNEAKKNYN 232 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL-VLANYSD 222 + +Y NS A + + I + + A+ +++ +L+ Y Sbjct: 233 VVATQYPNSSKAPRALYQL-----------YSIAK---DVDKNTASANQYKTKILSQYPK 278 Query: 223 AEHA 226 +E A Sbjct: 279 SEEA 282 >gi|258404280|ref|YP_003197022.1| N-acetylmuramoyl-L-alanine amidase [Desulfohalobium retbaense DSM 5692] gi|257796507|gb|ACV67444.1| N-acetylmuramoyl-L-alanine amidase [Desulfohalobium retbaense DSM 5692] Length = 603 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 12/114 (10%) Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 + +R N Y A +Y+ ++L R YL R ++ A +Q V+ Sbjct: 91 NTFWELYQRNPNGGYAPKALYYLGRVYSELGQ------RSYL-RKDFRQATDYYQRVVTR 143 Query: 220 YSDAEHAEEAMARLVEAY-VALALMDEAREVVSLIQ--ERYPQGYWARYVETLV 270 + +++A R + L ++A + L+ YP G +L+ Sbjct: 144 FPRHSWSDDAQLRKARIHLEHLGEKNQA--YLDLLSVVHNYPDGDMYAKARSLL 195 Score = 43.2 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 23/136 (16%) Query: 120 YITQYPESKNVDYV---YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + Y + N Y Y +G Y+++ + Y ++ + Y R+V R+ + Sbjct: 93 FWELYQRNPNGGYAPKALYYLGRVYSELGQR-SYLRKDFRQATDYYQRVVTRFPRHSWSD 151 Query: 177 GARFYVTVGR-NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 A+ L K Y+ V+ NY D + +A + L Sbjct: 152 DAQLRKARIHLEHLGE----------KNQAYLD----LLSVVHNYPDGDMYAKARSLL-- 195 Query: 236 AYVALALMDEAREVVS 251 L EA + Sbjct: 196 --DQLDRKKEAAPASA 209 Score = 42.8 bits (100), Expect = 0.053, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 33/113 (29%), Gaps = 14/113 (12%) Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQ-------YSAGKYQQAASLGEEYITQYPESKNVDY 132 F + + P G A K+L V Y ++QA + +T++P D Sbjct: 93 FWELYQRNPNGGYAPKALYYLGRVYSELGQRSYLRKDFRQATDYYQRVVTRFPRHSWSDD 152 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + + + + +V Y + AR + Sbjct: 153 AQLRKARIHLEHL-------GEKNQAYLDLLSVVHNYPDGDMYAKARSLLDQL 198 Score = 38.9 bits (90), Expect = 0.65, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 27/78 (34%), Gaps = 10/78 (12%) Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD-------EAREV 249 R+ R ++ F + + +A +A+ L Y L +A + Sbjct: 80 ARF---RSSWMQVKNTFWELYQRNPNGGYAPKALYYLGRVYSELGQRSYLRKDFRQATDY 136 Query: 250 VSLIQERYPQGYWARYVE 267 + R+P+ W+ + Sbjct: 137 YQRVVTRFPRHSWSDDAQ 154 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 24/67 (35%), Gaps = 7/67 (10%) Query: 45 DVYLDSVTDVRYQREVY-------EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 ++Y + + +Y E ++F +A +Y+ + FP + + Sbjct: 95 ELYQRNPNGGYAPKALYYLGRVYSELGQRSYLRKDFRQATDYYQRVVTRFPRHSWSDDAQ 154 Query: 98 LMSAFVQ 104 L A + Sbjct: 155 LRKARIH 161 >gi|160707933|ref|NP_001104256.1| intraflagellar transport protein 88 homolog [Bos taurus] Length = 825 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 35/259 (13%), Positives = 75/259 (28%), Gaps = 55/259 (21%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99 Q+S L +D + K ++ KA E++ D +L Sbjct: 469 QASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDCSCTE----ALYN 524 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIR 146 + +A ++ + +N V Y + Y Q+I Sbjct: 525 IGLTYKKLNRLDEALDC---FLKLHAILRNSAQVLYQIANVYELMEDPSQAMEWLMQLIS 581 Query: 147 DVPYDQRATKL-------------MLQYMSRIVERYT--------------NSPYVKGAR 179 VP D RA QY + ++ + + A Sbjct: 582 VVPTDSRALSKLGGLYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAI 641 Query: 180 FYVT---VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 Y + + ++ + + + G Y A+ ++ + + + E + LV Sbjct: 642 QYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPE---NVECLRFLVRL 698 Query: 237 YVALALMDEAREVVSLIQE 255 + L E +E + ++ Sbjct: 699 CTDIGLK-EVQEYAAKLKR 716 >gi|301168516|emb|CBW28106.1| conserved hypothetical protein [Bacteriovorax marinus SJ] Length = 243 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 75/207 (36%), Gaps = 18/207 (8%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + +E+ EKA + KA FN+ P + +L A + + G+ + Sbjct: 2 ETFNSQELLEKAKHCYNSGEYKKAAAIFNEIIEVEP---KSIDALFYLANIFHINGEIGK 58 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A + I+ P + +S + + D+ + + A K+ Q R+ R + Sbjct: 59 AIKAFNKVISIDPTHTDA-------AISLSVLYNDIGHYEDAKKVFNQANERVKTRARGN 111 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 + + A K +E+ Y+ + A+ + V+A D E E + Sbjct: 112 EGIDD-----QHVNKKFAVKHLELADLYMTYNRFDEALFEYNKVVAL--DTESLETRIKI 164 Query: 233 LVEAYVALALMDEAREVVSLIQERYPQ 259 + Y + +A + + ++ P Sbjct: 165 -AKVYAKKGFVSKAIDELKRLRTEEPN 190 >gi|208435167|ref|YP_002266833.1| paralysed flagella protein [Helicobacter pylori G27] gi|208433096|gb|ACI27967.1| paralysed flagella protein [Helicobacter pylori G27] Length = 791 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 176 PLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTMFKKDLYLLEIIALGQLG 235 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP N+ Y V + + K ++Y RI+ Sbjct: 236 IKKSLLIDIGTKWIKNYPTDPNIPEALYYVAKALDEN--------NNYKQAMRYYKRILL 287 Query: 168 RYTNSPYVKGARFYVTV 184 Y NS Y A+ + + Sbjct: 288 EYKNSRYAPLAQMRLAI 304 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 205 RTISRAFKNYPQTMFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPNIPEALYY 264 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 265 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 303 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 16/47 (34%) Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + NY + EA+ + +A +A I Y +A Sbjct: 249 IKNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYKNSRYA 295 >gi|163733523|ref|ZP_02140966.1| hypothetical protein RLO149_17768 [Roseobacter litoralis Och 149] gi|161393311|gb|EDQ17637.1| hypothetical protein RLO149_17768 [Roseobacter litoralis Och 149] Length = 271 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 34/85 (40%), Gaps = 2/85 (2%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-QQAAS 115 + + ++ A L + N+ A + F S ++P +A + L G+ + A + Sbjct: 148 EEDDFKNAQAALADGNYQSAADQFAAFSMNYPGGPLAAGADLGRGEALEGLGRTREAARA 207 Query: 116 LGEEYITQYPESKNVDYVYYLVGMS 140 + + + P + + +G S Sbjct: 208 YLDSF-SAEPTGQVAPQALFRLGKS 231 >gi|73671072|ref|YP_307087.1| TPR domain-containing protein [Methanosarcina barkeri str. Fusaro] gi|72398234|gb|AAZ72507.1| TPR-domain containing protein [Methanosarcina barkeri str. Fusaro] Length = 1979 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 70/226 (30%), Gaps = 56/226 (24%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ ++ L F A + + + P + + YS +Y++A EE Sbjct: 452 QQGLILLDNGKFEPALKALEKVAELKPDNDACW-----MNKGYALYSMDRYEEALEDFEE 506 Query: 120 YITQYPESKNVDYVYYL------VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + P YL G+ ++ R T+ L+ + V + Sbjct: 507 GLRLNP---------YLEKGWNNKGIVLGKLGR--------TEEALEAFEKAVSLRPDFE 549 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRY--------------Y------LKRGEYVAAIPRF 213 R + + + E + Y LK G+ A+ F Sbjct: 550 DAWKNRGLILLAVD---DYEKASEAFDEVLKTNPEDLDSIYNRGTALLKLGKTETALECF 606 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + +L+ D + + L A L +EA E + + P+ Sbjct: 607 EKILSLNPD---YPDLLYSLAVAQAKLGKQEEALETFEKLAAKNPE 649 Score = 42.0 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 65/194 (33%), Gaps = 34/194 (17%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D +Y +++ L+ + + ++ F + + P + + L + + G Y++ Sbjct: 1116 DPENLDALYMRSLALLRSKRYGESASGFREVLKRNP-SDTEALAHLST--ASFKQGFYEE 1172 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A L ++ +++ PE K V + G++ + K +++ + Sbjct: 1173 ALGLFDQVLSKNPERKT---VLFRKGVALKAL--------GEVKRASTIFDSVLKLKPDC 1221 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 Y + Y + EY A+ F+ L E+ Sbjct: 1222 TYALEQKAYTH-----------------FELEEYPEAVEAFKTALEYCQK---KEDLYYY 1261 Query: 233 LVEAYVALALMDEA 246 A+ L +EA Sbjct: 1262 RGIAFFRLGNFEEA 1275 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 76/214 (35%), Gaps = 38/214 (17%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-RKSLLMSAFVQYSAGKYQQAASLGEE 119 Y K ++ + + +A E F+ R+ P A ++ GK ++A + Sbjct: 179 YSKGLVLANLEKYGEALECFDSLIREKPRHKDAWKQKYFSLI----KLGKNEEALECVDA 234 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 ++ ++P S+ Y G+ ++ R + + ++I++ + Sbjct: 235 FLRKFPVSET---ALYQKGILLNELSR--------YEDAEKTFTKILKINPGNKE----- 278 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + LA ++ L+ + AI F+ + EA A + Sbjct: 279 ---IWLKKGLALIQL------LRLND---AIKAFEEAIKLDPT---YFEAWNYKCLALMK 323 Query: 240 LALMDEAREVVSLIQERYPQGY--WARYVETLVK 271 L + +EA E + E YP+ W LVK Sbjct: 324 LEVYEEALEAFDSVLEIYPETKEIWYNRALALVK 357 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 16/134 (11%), Positives = 40/134 (29%), Gaps = 17/134 (12%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + +Y V+ K++ + A F++ P +SL +Y+ Sbjct: 1850 DPENIKAIYSVGVVCFKQKMYETACRAFDEALAINP---WHEQSLKYLGISLAKIEEYED 1906 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A + + P G+ ++ + + + I+ Y Sbjct: 1907 ALRTFDRLLRIRPHDVQ---AMNYRGVILGKLGKYT--------EAINTFNEILRLYPE- 1954 Query: 173 PYVKGARFYVTVGR 186 + A+ + + Sbjct: 1955 --MADAKRKLEALK 1966 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 72/226 (31%), Gaps = 31/226 (13%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +Y ++ + Q+F +A + + P + ++ + + ++A Sbjct: 1648 NALYSRSEASFQLQHFEEAAQDLEKVLLSAPDFLNSIEACYRLGIARMELQECEKALEAF 1707 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + + Q P + Y G+ + + + ++E P Sbjct: 1708 DIVLQQDPAHRE---ALYYRGLVLFNL--------SEYEAAAETFGMLLEASPEDP---E 1753 Query: 178 ARFYVTVGRNQLAAKEVE------IGRYYLKRGE--YVAA-----IPRFQLVLANYSD-- 222 + Y+ + +L + E + K E Y AA + R Q + + Sbjct: 1754 SLNYLGLCLLELESPEAALKAFEKAALFNPKNEETLYNAATTLIKLNRPQESIDYFDRIL 1813 Query: 223 --AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 + + + A+ L + EA + L E+ P+ A Y Sbjct: 1814 DISPENLDVLNYKGIAFCKLEMYREALKAFDLALEKDPENIKAIYS 1859 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 71/208 (34%), Gaps = 44/208 (21%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAASL 116 Y K + K + +A + F + P + + + + G +++A + Sbjct: 1056 YLKGISHSKLKQHKEAAKDFEKVLELDP-------AYQDTCYQLGLSYFELGNFEEAIRV 1108 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 E + P +N+D Y+ ++ + R +++R + Sbjct: 1109 FESALKMDP--ENLD-ALYMRSLALLRSKR--------YGESASGFREVLKRNPS----- 1152 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 + A + + K+G Y A+ F VL+ + + + R A Sbjct: 1153 ----------DTEALAHLSTASF--KQGFYEEALGLFDQVLSKNPERKTV---LFRKGVA 1197 Query: 237 YVALALMDEAREVV-SLIQERYPQGYWA 263 AL + A + S+++ + P +A Sbjct: 1198 LKALGEVKRASTIFDSVLKLK-PDCTYA 1224 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 40/95 (42%), Gaps = 6/95 (6%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + ++ + + LK + +A + F+Q F +L + K++ Sbjct: 35 DSGHTGALFNRGLALLKIKKPEEALDSFDQV--LH-FEPENFDALYKKGIALATLEKFEA 91 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 A + + P++ + +Y G+++A++ ++ Sbjct: 92 ALETYDNALEINPDNPKI---WYQKGLAFAELEKN 123 Score = 35.9 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 33/236 (13%), Positives = 74/236 (31%), Gaps = 62/236 (26%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV-----------------ARKS-- 96 + +Y+K +L + + A + F + + P A K+ Sbjct: 242 SETALYQKGILLNELSRYEDAEKTFTKILKINPGNKEIWLKKGLALIQLLRLNDAIKAFE 301 Query: 97 ---LLMSAF---------VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 L + Y++A + + YPE+K + +Y ++ ++ Sbjct: 302 EAIKLDPTYFEAWNYKCLALMKLEVYEEALEAFDSVLEIYPETKEI---WYNRALALVKL 358 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + + SR E Y GR + G Sbjct: 359 --------QHFGEAAKSFSRTAELDP--AYGDALYQQ---------------GRLLAREG 393 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 +Y A+ F +L + A++ ++ + L ++EA + ++ E+ P+ Sbjct: 394 KYEEALKAFDSMLEQNPEFIKAQKLRGTML---IKLGRIEEALDSLAQSLEKEPEN 446 >gi|320535947|ref|ZP_08036012.1| hypothetical protein HMPREF9554_00737 [Treponema phagedenis F0421] gi|320147198|gb|EFW38749.1| hypothetical protein HMPREF9554_00737 [Treponema phagedenis F0421] Length = 528 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 9/82 (10%) Query: 108 GKYQQAASLGEEYITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 G A + E++ S+N +D ++L G +Y ++ R +L L + Sbjct: 450 GNAAGALASLEQFFVF---SENRIDEAWFLRGQAY-----ELNGPNRNIRLALDAYQTVT 501 Query: 167 ERYTNSPYVKGARFYVTVGRNQ 188 + + S + + + + +N Sbjct: 502 KTFPQSQWWEKSNDRIRYIKNF 523 >gi|227823306|ref|YP_002827278.1| hypothetical protein contains tetratricopeptide-like helical domain [Sinorhizobium fredii NGR234] gi|227342307|gb|ACP26525.1| hypothetical protein contains tetratricopeptide-like helical domain [Sinorhizobium fredii NGR234] Length = 340 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 46/146 (31%), Gaps = 14/146 (9%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G ++ + ++Y+ A + ++ A + F FP A + Sbjct: 196 GNGGLNANPGSEQQTASLSNPGDLYQSAYGHVLSGDYGMAEQEFRDYLAAFPEGEKAADA 255 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPE---SKNVDYVYYLVGMSYAQMIRDVPYDQR 153 QYS GKY A + ++ + S + +GMS + Sbjct: 256 SFWMGEAQYSQGKYSDA---AKTFLNAHQAYGKSPKAPEMLLKLGMSLGALDNK------ 306 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGAR 179 + + + +RY + A+ Sbjct: 307 --ETACATLREVDKRYPKASAAVRAK 330 Score = 44.3 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 Q + + A F++ + +G+Y A F Sbjct: 235 AEQEFRDYLAAFPEGEKAADASFWMGEAQ--------------YSQGKYSDAAKTFLNAH 280 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y + A E + +L + AL + A + + +RYP+ Sbjct: 281 QAYGKSPKAPEMLLKLGMSLGALDNKETACATLREVDKRYPKAS 324 >gi|167753467|ref|ZP_02425594.1| hypothetical protein ALIPUT_01741 [Alistipes putredinis DSM 17216] gi|167658092|gb|EDS02222.1| hypothetical protein ALIPUT_01741 [Alistipes putredinis DSM 17216] Length = 995 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 59/194 (30%), Gaps = 21/194 (10%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE F+ ++ + + + ++ +L + G +++ S + Sbjct: 616 YELGRTFVAQERYREGAAVLEPFVETYVYSPYRSAALSELGLAYLNLGDKKKSLSYYDMV 675 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + P+S + Q IRD+ + Y S Sbjct: 676 VKTAPQSSDAKDAL--------QGIRDIYVSEGDAGGYFDYAR-------KSGVEGDLTA 720 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 R+ L+ R GE +A + L +Y + +A+ L + Y+ Sbjct: 721 M---SRDSLS---FAAARRIYLSGEPASAAKSLRSYLESYPKGYYTADALYCLSDCYLKT 774 Query: 241 ALMDEAREVVSLIQ 254 A E ++ + Sbjct: 775 GERSRAIETLAALA 788 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 71/234 (30%), Gaps = 46/234 (19%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + + N+ A + + P A + + + +S +A + Sbjct: 471 QGEIAYGRGNYDVALRDYESYLKRAPKTEPEYAM-AFYNTGYCHFSKENMPRARESFVRF 529 Query: 121 ITQYPE------------------SKNVDYV--YYLVGMSYAQMIRDVPYDQRA------ 154 I YP + D YY + + D QRA Sbjct: 530 IELYPTQDGYRTDARNRLGDTYYSDRQFDEALKYYGQAAAASDDGADYARYQRAVTLGIL 589 Query: 155 --TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 T ++ + +I+ R Y+ A E+ GR ++ + Y Sbjct: 590 GRTSEKIKALQQII-RDGRGDYLDDAT------------YEL--GRTFVAQERYREGAAV 634 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 + + Y + + A++ L AY+ L ++ ++ + PQ A+ Sbjct: 635 LEPFVETYVYSPYRSAALSELGLAYLNLGDKKKSLSYYDMVVKTAPQSSDAKDA 688 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 23/53 (43%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 Y K L F++A + N+ +P + R + + A Y++ Y +A Sbjct: 357 YGKLQYELGGGRFNEAIQVLNRYVAQYPSSPRVRTAKELLAAAYYNSHNYDEA 409 >gi|162448827|ref|YP_001611194.1| hypothetical protein sce0557 [Sorangium cellulosum 'So ce 56'] gi|161159409|emb|CAN90714.1| hypothetical protein sce0557 [Sorangium cellulosum 'So ce 56'] Length = 248 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 34/77 (44%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 R + + +A L+ + + A + FP + ++ +++ V + G Q+A Sbjct: 163 RAESALLTEARAKLRSGDVAGATALLERLRAQFPNGVLRQEREVLAIDVLAARGNAQEAK 222 Query: 115 SLGEEYITQYPESKNVD 131 + ++ QYP+S + Sbjct: 223 RRAQAFVKQYPKSPHSA 239 >gi|253699982|ref|YP_003021171.1| sporulation domain protein [Geobacter sp. M21] gi|251774832|gb|ACT17413.1| Sporulation domain protein [Geobacter sp. M21] Length = 409 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 31/76 (40%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + + + G Y A + +L + EEA+ L ++Y A ++A V + Sbjct: 33 MATAKGHFQDGGYYYASTWLERILKKWPKTGQREEALVMLAKSYAATGREEKAARTVKTL 92 Query: 254 QERYPQGYWARYVETL 269 + YPQ E L Sbjct: 93 LKEYPQTAAKLDPEML 108 Score = 35.5 bits (81), Expect = 8.6, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 40/111 (36%), Gaps = 13/111 (11%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 + + S+ C L+ Q + + A ++ + Sbjct: 1 MLNIRMLVAWMLLSVFCCPLISHAAQPD-------------EAAMMATAKGHFQDGGYYY 47 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 A + + + +P G ++L+M A + G+ ++AA + + +YP+ Sbjct: 48 ASTWLERILKKWPKTGQREEALVMLAKSYAATGREEKAARTVKTLLKEYPQ 98 >gi|119511345|ref|ZP_01630458.1| hypothetical protein N9414_10942 [Nodularia spumigena CCY9414] gi|119463967|gb|EAW44891.1| hypothetical protein N9414_10942 [Nodularia spumigena CCY9414] Length = 268 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 92/274 (33%), Gaps = 47/274 (17%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR--EVYEKAVLFLKEQNFSKAYEYFNQ 82 I +++ ++GW + S+T + + E+ +KA+ + +F+ A Y+ Q Sbjct: 4 LIGIVLSLLLVLGWSTPVLAVSEVPSITQEQLEEGNEIAKKALKATNKGDFATAETYWTQ 63 Query: 83 CSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 FP + + + S K Q A + + I P + + Y ++ Sbjct: 64 IIEQFPTNAGAWSNR-----GNSRVSQNKLQAALTDYNQAIELAPNATD-PY------LN 111 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV----KGARFYVTVGRNQLA--AKEV 194 + + + + + ++E N P A+ + ++ +A K + Sbjct: 112 RGTALEGLGK----WQEAIADYNHVLELDPNDPMAYNNRGNAKSGLGQWQDAIADYQKSM 167 Query: 195 EIG-RYYLKRGEYV----------AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 EI + R Y AAI + ++ Y A+ AY Sbjct: 168 EIAPNFAFARANYALALYETGQIDAAIHEMKNIVRKYPQFADMRAAL---TAAYWVNGNQ 224 Query: 244 DEARE---VVSLIQERYPQGYW----ARYVETLV 270 EA + RY W R+ ++V Sbjct: 225 GEAESNWVAAYGLDNRYKDMNWVTNIRRWPPSMV 258 >gi|116878341|ref|YP_355439.2| hypothetical protein Pcar_0006 [Pelobacter carbinolicus DSM 2380] gi|114842977|gb|ABA87269.2| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380] Length = 283 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 74/214 (34%), Gaps = 36/214 (16%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ--YSAGKYQQAA 114 +++Y +A +++ + A +P ++LL++ + + + Sbjct: 44 AQKLYRRAEKHIEKGAYRTAVSQLRSLHDHYPATETGARALLLAGDILLLHLRQDQEALL 103 Query: 115 S--LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 S L E DY D + QRA + + ++ Y Sbjct: 104 SFLLVER-----------DY-------------PDTAWSQRARRQVADIYKYRLQDYGR- 138 Query: 173 PYVKGARFYVTV---GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 A + + ++ E I Y + + F+ ++ Y ++ EA Sbjct: 139 --ALVAYQKILDGPSTQREIVQYE--IADTYFRMNNFEQTRIEFESLINEYPESSLLPEA 194 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + R+ A++ + +A +V+ + YP+ +A Sbjct: 195 LYRIGCAFMLEGNLSDAVQVLQRLCRDYPEHSFA 228 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 45/132 (34%), Gaps = 11/132 (8%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A + + NF + F ++P + + ++L G A + + Sbjct: 159 YEIADTYFRMNNFEQTRIEFESLINEYPESSLLPEALYRIGCAFMLEGNLSDAVQVLQRL 218 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YPE + + ++ ++ + LQ ++ + RY Sbjct: 219 CRDYPEHSF--------ALEGYFTLAEIHEERGELRKALQVLAGLEGRY---AREPILAQ 267 Query: 181 YVTVGRNQLAAK 192 +T +N++ K Sbjct: 268 RITQVQNRIRKK 279 >gi|115526689|ref|YP_783600.1| TPR repeat-containing protein [Rhodopseudomonas palustris BisA53] gi|115520636|gb|ABJ08620.1| Tetratricopeptide TPR_2 repeat protein [Rhodopseudomonas palustris BisA53] Length = 336 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 33/133 (24%), Gaps = 22/133 (16%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 K Y A + +YP + V Y +G S+ Q Sbjct: 211 TPKDEFDLGIGYMQRKDYALAEQTMRGFTQKYPSDRLVGDAQYWLGESFFQR-------- 262 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + + + + +Y S A + L KE AA Sbjct: 263 QQYRDSAEAFLAVTTKYETSAKAADALLRLGQSLAALKEKE--------------AACAA 308 Query: 213 FQLVLANYSDAEH 225 F V Y A Sbjct: 309 FGEVARKYPRASA 321 Score = 39.3 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 14/110 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 ++ L Q M ++Y + V A++++ G + +R +Y + Sbjct: 225 RKDYALAEQTMRGFTQKYPSDRLVGDAQYWL--------------GESFFQRQQYRDSAE 270 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 F V Y + A +A+ RL ++ AL + A + +YP+ Sbjct: 271 AFLAVTTKYETSAKAADALLRLGQSLAALKEKEAACAAFGEVARKYPRAS 320 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 10/126 (7%), Positives = 40/126 (31%), Gaps = 14/126 (11%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 + + ++ ++ + +++ ++++ A + ++ +P + + + Sbjct: 203 PPTAPPSQTPKDEFDLGIGYMQRKDYALAEQTMRGFTQKYPSDRLVGDAQYWLGESFFQR 262 Query: 108 GKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 +Y E ++ Y S +G S A + + + Sbjct: 263 QQY---RDSAEAFLAVTTKYETSAKAADALLRLGQSLAAL--------KEKEAACAAFGE 311 Query: 165 IVERYT 170 + +Y Sbjct: 312 VARKYP 317 >gi|218442020|ref|YP_002380349.1| hypothetical protein PCC7424_5131 [Cyanothece sp. PCC 7424] gi|218174748|gb|ACK73481.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424] Length = 361 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 14/116 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ + V +K NFS A + F + R P A + G + A + Sbjct: 49 LFNQGVAKIKAGNFSAAIKDFTEVIRLNPNLPEAYN---NRGNARSKLGDNKGAIEDYNQ 105 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 I P+S+ YY G + +++ + K ++ ++ + NS Sbjct: 106 AINLNPKSEQ---AYYNRGKARSELGDN--------KGAIEDYNQALNLNPNSAEA 150 >gi|75676897|ref|YP_319318.1| TPR repeat-containing protein [Nitrobacter winogradskyi Nb-255] gi|74421767|gb|ABA05966.1| TPR repeat protein [Nitrobacter winogradskyi Nb-255] Length = 305 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 31/129 (24%), Gaps = 22/129 (17%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 Y A + +YP Y +G S Q + + Sbjct: 184 QFDLGIGYMQRKDYALAEETMRSFTEKYPSDTLTGDAQYWLGESLFQRQK--------YR 235 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + +Y +S V A + L KE AA F V Sbjct: 236 EAAEAFLGVTTKYDSSAKVADALLRLGQSLAALKEKE--------------AACAAFGEV 281 Query: 217 LANYSDAEH 225 Y A Sbjct: 282 TRKYPRASA 290 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 46/126 (36%), Gaps = 14/126 (11%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 L ++ R+ ++ + +++ ++++ A E + +P + + + Sbjct: 172 LTTLPPSATPRDQFDLGIGYMQRKDYALAEETMRSFTEKYPSDTLTGDAQYWLGESLFQR 231 Query: 108 GKYQQAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 KY++A E ++ T+Y S V +G S A + + + Sbjct: 232 QKYREA---AEAFLGVTTKYDSSAKVADALLRLGQSLAAL--------KEKEAACAAFGE 280 Query: 165 IVERYT 170 + +Y Sbjct: 281 VTRKYP 286 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 24/123 (19%) Query: 149 PYDQ----------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 P DQ + L + M E+Y + A++++ Sbjct: 181 PRDQFDLGIGYMQRKDYALAEETMRSFTEKYPSDTLTGDAQYWLGESL------------ 228 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 +R +Y A F V Y + +A+ RL ++ AL + A + +YP Sbjct: 229 --FQRQKYREAAEAFLGVTTKYDSSAKVADALLRLGQSLAALKEKEAACAAFGEVTRKYP 286 Query: 259 QGY 261 + Sbjct: 287 RAS 289 >gi|223038565|ref|ZP_03608858.1| TPR repeat-containing protein [Campylobacter rectus RM3267] gi|222879967|gb|EEF15055.1| TPR repeat-containing protein [Campylobacter rectus RM3267] Length = 297 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 35/98 (35%), Gaps = 7/98 (7%) Query: 176 KGARFYVTVGRNQLAAKEVEIGRYY-----LKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 A+ ++ + + +Y K+ Y AI +Q + Y A++ + + Sbjct: 200 DDAKARYEYLLSK--DHKPAMANFYLGEIAYKQKAYNNAIKHYQQSIQLYDKADYTPKLL 257 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 ++ + + A + ++ YP A+ T Sbjct: 258 YHTAISFDKIKDTESANKFYKALKLGYPDSKEAKQAPT 295 Score = 43.2 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 17/130 (13%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 R ++V +A A + +A L A Y Y A Sbjct: 181 RKNQDVASEAKKLFDAGKLDDAKARYEYLLSKDHKPAMANFYLGEIA---YKQKAYNNAI 237 Query: 115 SLGEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 ++ I Y DY + Y +S+ ++ + T+ ++ + Y + Sbjct: 238 KHYQQSIQLY---DKADYTPKLLYHTAISFDKI--------KDTESANKFYKALKLGYPD 286 Query: 172 SPYVKGARFY 181 S K A Sbjct: 287 SKEAKQAPTR 296 >gi|16332023|ref|NP_442751.1| soluble lytic transglycosylase [Synechocystis sp. PCC 6803] gi|1001335|dbj|BAA10822.1| soluble lytic transglycosylase [Synechocystis sp. PCC 6803] Length = 847 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 66/209 (31%), Gaps = 39/209 (18%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A +P +A LLM + + QA + ++ + QYP+S V Sbjct: 224 ALRVLEGLEVQYP--VLAPYILLMRGRGYQLSNENDQAEATWQDILDQYPDSPVVVNALE 281 Query: 136 LVGM---SYAQM-IRDVPYDQRATK----------LMLQYMSRIVERYTNSPYVKGARFY 181 +G +Y Q I D P R L+ +I++ + Sbjct: 282 NLGSLDETYWQQAIADHPGHPRTLAILHQQLESEPNALEIQRQILQNHPT-------DGR 334 Query: 182 VTVGRNQLAAK---EV------EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 N L A E+ +G + R Y AI A Y A + R Sbjct: 335 TAAVINSLTANRQGELTPEDWQAMGDNFWHRRIYNQAI-------APYEKAPSNARNLYR 387 Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGY 261 L A L +EA+E + YP Sbjct: 388 LARAQQISKLDNEAKENYRQLIATYPDSE 416 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 75/220 (34%), Gaps = 43/220 (19%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 +++A + + + ++L A Q + +A + I YP+S+ Sbjct: 368 YNQAIAPYEKAPSN-------ARNLYRLARAQQISKLDNEAKENYRQLIATYPDSEETAL 420 Query: 133 VYYLV--------GMSYAQMIRDVPYDQRATKLM--LQYMSRI------------VERYT 170 + G+ Y Q + DQ A+ L + +++ +++Y Sbjct: 421 ALRRLAELVPPREGVQYLQQLEQQFPDQGASALAARIDLLAKFDANQAQQARQALLQKYP 480 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 NS R+ A+E K G Y A + + ++ +A+ Sbjct: 481 NSDAAADYRWR--------QAQEFA------KAGNYTEAWRWAKEIANQNPQSDVTPKAI 526 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + + L +++ + +YPQ Y+A L+ Sbjct: 527 FWIGKWAQQLGRSADSKAAFETVLAKYPQSYYAWRSAVLL 566 >gi|239997031|ref|ZP_04717555.1| ATP-dependent protease La [Alteromonas macleodii ATCC 27126] Length = 396 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 73/249 (29%), Gaps = 37/249 (14%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + +L I F A+ F G S +Y + + + +L+ N+++A + Sbjct: 6 RTSLKIGFLSAIIFTSGCVSNSQSGLYGGNFDHEEAAKTRMSLGLTYLQNNNYTQAKKNL 65 Query: 81 NQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 ++ F + A+ G +A E I P + ++ Sbjct: 66 DKALE----FNPRSADVQFAMAYYYQLVGDNLRAEEYYETAIDLAPNNGDI-------AN 114 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 SY + Y + N Y A+ Y + + Sbjct: 115 SYGA----FKCQNGEYEKAKAYFFDAIN---NRLYANAAQTYENLALCAQSQ-------- 159 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS---LIQER 256 G+ AI FQ L + +++ L E Y + A + + + Sbjct: 160 ----GKLDEAIGYFQDALKHQP---ARGKSLFLLSELYTVSEQWELAESTLRKYERVAKV 212 Query: 257 YPQGYWARY 265 P W Y Sbjct: 213 TPDSLWLAY 221 >gi|119492428|ref|ZP_01623749.1| serine/threonine kinase [Lyngbya sp. PCC 8106] gi|119453094|gb|EAW34263.1| serine/threonine kinase [Lyngbya sp. PCC 8106] Length = 724 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 49/172 (28%), Gaps = 38/172 (22%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 D + + + V L++ N A Q + ++ Y +YQ Sbjct: 330 PDPIKAQVAFSQGVEKLEKGNPKAAVRTLTQAIN---YNSDNPEAYHQRGNAYYDLEQYQ 386 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + I P N Y+ G++ D + + S+++E Sbjct: 387 NAIEDYTQAIQLNPNYTN---AYFNRGLARY--------DAQDLSGAIADYSKVIELEPT 435 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 Y KRG A+ +Q + +YS+ Sbjct: 436 DVDA------------------------YYKRGLAHYALEDYQKAIEDYSEV 463 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 7/87 (8%) Query: 54 VRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + Y + ++ + +Q+F A + + P +S A Y Y Q Sbjct: 602 TPTDHKAYSNRGMVQVAQQDFQAAIADYTKAIELNPNDA---QSYSNRATTYYELQDYNQ 658 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGM 139 A + + I P+ N YY G+ Sbjct: 659 AIADYVQAIRLKPDYPN---AYYGRGI 682 >gi|218247929|ref|YP_002373300.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801] gi|218168407|gb|ACK67144.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801] Length = 270 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 49/291 (16%), Positives = 98/291 (33%), Gaps = 76/291 (26%) Query: 24 LTIFFSIAVCFLVGWERQSS---RDVYLDSVTDVRYQR--EVYEKAVLFLKEQNFSKAYE 78 + +F ++ +G+ + +D + S+T+ + Q+ E+ +KA+ ++ NFS+A Sbjct: 2 IRLFVTLLTILWLGFATIPTALAQDTSILSITEEQLQQGEEIAKKAIEATEKGNFSQAEA 61 Query: 79 YFNQCSRDFPFAG--VAR-------KSLLMSAFVQYS----------------------A 107 Y++Q FP + ++ L A ++ Sbjct: 62 YWSQLIEQFPSNPAVWSNRGNSRVSQNKLDEAIADFNQAITLAPNEPDPYLNRGAALEGQ 121 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 GKYQ+A + + P + Y + + L+ + VE Sbjct: 122 GKYQEAIADYNHVLELDP-HDAMAY----------NNRGNAEGGLGQWEKALEDYQKAVE 170 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 N + K LA+ ++ G A+ + + ++ Y Sbjct: 171 IQPNFAFAK--------ANVALASYQL---------GNTQEALNQMRKIVRKYPMFPDMR 213 Query: 228 EAM-ARLVEAYVALALMDEARE--VVSL-IQERYPQGYW----ARYVETLV 270 A+ A L E L EA V ++ + RY W R+ +V Sbjct: 214 AALTAVLWE----LGQQGEAESNWVAAVGMDNRYQDLEWVSHIRRWPPEMV 260 >gi|296436080|gb|ADH18254.1| hypothetical protein G9768_02865 [Chlamydia trachomatis G/9768] gi|296437941|gb|ADH20102.1| hypothetical protein G11074_02870 [Chlamydia trachomatis G/11074] gi|297140441|gb|ADH97199.1| hypothetical protein CTG9301_02875 [Chlamydia trachomatis G/9301] Length = 318 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 52/165 (31%), Gaps = 22/165 (13%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++ S +Y K L + +S+A + + S FP ++ +S + A + Sbjct: 158 EEIVTASSDADLKASALYAKGALLFDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKI 217 Query: 104 Q--------YSAGKYQQAASLGEEYITQYPESK----------NVDYVYYLVGMSYAQMI 145 Y+ Q A Q+P ++ Y Sbjct: 218 HCLQALQEPYNEQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAY---ASCLYSTG 274 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 R ++A+ Y S +E + ++ YV + Q++ Sbjct: 275 RFYEKKRKAS-SAKIYYSIALENFPDTSYVAKCNKRLERLSKQMS 318 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 56/149 (37%), Gaps = 6/149 (4%) Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 A+ +LL + +Y +A ++ Q+P + L+ + PY+ Sbjct: 175 YAKGALL------FDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 ++ + + + +++ N P Y+ A+ GR+Y K+ + +A Sbjct: 229 EQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAYASCLYSTGRFYEKKRKASSAKI 288 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + + L N+ D + + RL + Sbjct: 289 YYSIALENFPDTSYVAKCNKRLERLSKQM 317 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 82/261 (31%), Gaps = 43/261 (16%) Query: 23 ALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYF 80 AL +F + C+ + R + ++ E+Y E + + + F +A F Sbjct: 7 ALCLFLVLPCGCYARVPSFEPFRGAIAPNRYTPKHSPELYFEMGDKYFQAKKFKQALLCF 66 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VY 134 + FP + K+ + G A +Y + +Y + Sbjct: 67 GMLTHHFPEHALHPKAQFLVGLCYLEMGHPDLADKALTQYQEL----ADTEYSEQLFAIK 122 Query: 135 YLVGMSYAQMIR-------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 Y + S+A R P +A L+ IV ++ + + Sbjct: 123 YSIAQSFANGKRKNIVPLEGFPKLLKADTDALRIFEEIVTASSD----ADLKASALYAKG 178 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA---------MARLVEAYV 238 L R EY AI + V + + E+ + L E Y Sbjct: 179 ALL----------FDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228 Query: 239 ALALMDEAREVVSLIQERYPQ 259 + +AR + +++++P Sbjct: 229 E-QYLQDARMNAAALRKQHPN 248 >gi|255311365|ref|ZP_05353935.1| hypothetical protein Ctra62_02870 [Chlamydia trachomatis 6276] gi|255317666|ref|ZP_05358912.1| hypothetical protein Ctra6_02860 [Chlamydia trachomatis 6276s] Length = 318 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 52/165 (31%), Gaps = 22/165 (13%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++ S +Y K L + +S+A + + S FP ++ +S + A + Sbjct: 158 EEIVTASSDADLKASALYAKGALLFDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKI 217 Query: 104 Q--------YSAGKYQQAASLGEEYITQYPESK----------NVDYVYYLVGMSYAQMI 145 Y+ Q A Q+P ++ Y Sbjct: 218 HCLQALQEPYNEQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAY---ASCLYSTG 274 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 R ++A+ Y S +E + ++ YV + Q++ Sbjct: 275 RFYEKKRKAS-SAKIYYSIALENFPDTSYVAKCNKRLERLSKQMS 318 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 56/149 (37%), Gaps = 6/149 (4%) Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 A+ +LL + +Y +A ++ Q+P + L+ + PY+ Sbjct: 175 YAKGALL------FDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 ++ + + + +++ N P Y+ A+ GR+Y K+ + +A Sbjct: 229 EQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAYASCLYSTGRFYEKKRKASSAKI 288 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + + L N+ D + + RL + Sbjct: 289 YYSIALENFPDTSYVAKCNKRLERLSKQM 317 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 82/261 (31%), Gaps = 43/261 (16%) Query: 23 ALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYF 80 AL +F + C+ + R + ++ E+Y E + + + F +A F Sbjct: 7 ALCLFLVLPCGCYARVPSFEPFRGAIAPNRYTPKHSPELYFEIGDKYFQAKKFKQALLCF 66 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VY 134 + FP + K+ + G A +Y + +Y + Sbjct: 67 GMLTHHFPEHALHPKAQFLVGLCYLEMGHPDLADKALTQYQEL----ADTEYSEQLFAIK 122 Query: 135 YLVGMSYAQMIR-------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 Y + S+A R P +A L+ IV ++ + + Sbjct: 123 YSIAQSFANGKRKNIVPLEGFPKLLKADTDALRIFEEIVTASSD----ADLKASALYAKG 178 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA---------MARLVEAYV 238 L R EY AI + V + + E+ + L E Y Sbjct: 179 ALL----------FDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228 Query: 239 ALALMDEAREVVSLIQERYPQ 259 + +AR + +++++P Sbjct: 229 E-QYLQDARMNAAALRKQHPN 248 >gi|210135433|ref|YP_002301872.1| paralysed flagella protein [Helicobacter pylori P12] gi|210133401|gb|ACJ08392.1| paralysed flagella protein [Helicobacter pylori P12] Length = 801 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 186 PLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTMFKKDLYLLEIIALGQLG 245 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP N+ Y V + + K ++Y RI+ Sbjct: 246 IKKSLLIDIGTKWIKNYPTDPNIPEALYYVAKALDEN--------NNYKQAMRYYKRILL 297 Query: 168 RYTNSPYVKGARFYVTV 184 Y NS Y A+ + + Sbjct: 298 EYKNSRYAPLAQMRLAI 314 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 215 RTISRAFKNYPQTMFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPNIPEALYY 274 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 275 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 313 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 16/47 (34%) Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + NY + EA+ + +A +A I Y +A Sbjct: 259 IKNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYKNSRYA 305 >gi|166154762|ref|YP_001654880.1| hypothetical protein CTL0809 [Chlamydia trachomatis 434/Bu] gi|166155637|ref|YP_001653892.1| hypothetical protein CTLon_0804 [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301336036|ref|ZP_07224280.1| hypothetical protein CtraL_04390 [Chlamydia trachomatis L2tet1] gi|165930750|emb|CAP04247.1| putative exported protein [Chlamydia trachomatis 434/Bu] gi|165931625|emb|CAP07201.1| putative exported protein [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 318 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 52/165 (31%), Gaps = 22/165 (13%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++ S +Y K L + +S+A + + S FP ++ +S + A + Sbjct: 158 EEIVTASSDADLKASALYAKGALLFDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKI 217 Query: 104 Q--------YSAGKYQQAASLGEEYITQYPESK----------NVDYVYYLVGMSYAQMI 145 Y+ Q A Q+P ++ Y Sbjct: 218 HCLQALQEPYNEQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAY---ASCLYSTG 274 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 R ++A+ Y S +E + ++ YV + Q++ Sbjct: 275 RFYEKKRKAS-SAKIYYSIALENFPDTSYVAKCNKRLERLSKQMS 318 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 56/149 (37%), Gaps = 6/149 (4%) Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 A+ +LL + +Y +A ++ Q+P + L+ + PY+ Sbjct: 175 YAKGALL------FDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 ++ + + + +++ N P Y+ A+ GR+Y K+ + +A Sbjct: 229 EQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAYASCLYSTGRFYEKKRKASSAKI 288 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + + L N+ D + + RL + Sbjct: 289 YYSIALENFPDTSYVAKCNKRLERLSKQM 317 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 82/261 (31%), Gaps = 43/261 (16%) Query: 23 ALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYF 80 AL +F + C+ + R + ++ E+Y E + + + F +A F Sbjct: 7 ALCLFLVLPCGCYARVPSFEPFRGAIAPNRYIPKHSPELYFEMGDKYFQAKKFKQALLCF 66 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VY 134 + FP + K+ + G A +Y + +Y + Sbjct: 67 GMITHHFPEHALHPKAQFLVGLCYLEMGHPDLADKALTQYQEL----ADTEYSEQLFAIK 122 Query: 135 YLVGMSYAQMIR-------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 Y + S+A R P +A L+ IV ++ + + Sbjct: 123 YSIAQSFANGKRKNIVPLEGFPKLLKADTDALRIFEEIVTASSD----ADLKASALYAKG 178 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA---------MARLVEAYV 238 L R EY AI + V + + E+ + L E Y Sbjct: 179 ALL----------FDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228 Query: 239 ALALMDEAREVVSLIQERYPQ 259 + +AR + +++++P Sbjct: 229 E-QYLQDARMNAAALRKQHPN 248 >gi|15605276|ref|NP_220062.1| hypothetical protein CT547 [Chlamydia trachomatis D/UW-3/CX] gi|255348925|ref|ZP_05380932.1| hypothetical protein Ctra70_02915 [Chlamydia trachomatis 70] gi|255503465|ref|ZP_05381855.1| hypothetical protein Ctra7_02925 [Chlamydia trachomatis 70s] gi|255507143|ref|ZP_05382782.1| hypothetical protein CtraD_02900 [Chlamydia trachomatis D(s)2923] gi|3328986|gb|AAC68149.1| hypothetical protein CT_547 [Chlamydia trachomatis D/UW-3/CX] gi|289525592|emb|CBJ15070.1| putative exported protein [Chlamydia trachomatis Sweden2] gi|296435152|gb|ADH17330.1| hypothetical protein E150_02890 [Chlamydia trachomatis E/150] gi|296437008|gb|ADH19178.1| hypothetical protein G11222_02875 [Chlamydia trachomatis G/11222] gi|296438872|gb|ADH21025.1| hypothetical protein E11023_02875 [Chlamydia trachomatis E/11023] Length = 318 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 52/165 (31%), Gaps = 22/165 (13%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++ S +Y K L + +S+A + + S FP ++ +S + A + Sbjct: 158 EEIVTASSDADLKASALYAKGALLFDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKI 217 Query: 104 Q--------YSAGKYQQAASLGEEYITQYPESK----------NVDYVYYLVGMSYAQMI 145 Y+ Q A Q+P ++ Y Sbjct: 218 HCLQALQEPYNEQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAY---ASCLYSTG 274 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 R ++A+ Y S +E + ++ YV + Q++ Sbjct: 275 RFYEKKRKAS-SAKIYYSIALENFPDTSYVAKCNKRLERLSKQMS 318 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 56/149 (37%), Gaps = 6/149 (4%) Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 A+ +LL + +Y +A ++ Q+P + L+ + PY+ Sbjct: 175 YAKGALL------FDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 ++ + + + +++ N P Y+ A+ GR+Y K+ + +A Sbjct: 229 EQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAYASCLYSTGRFYEKKRKASSAKI 288 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + + L N+ D + + RL + Sbjct: 289 YYSIALENFPDTSYVAKCNKRLERLSKQM 317 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 82/261 (31%), Gaps = 43/261 (16%) Query: 23 ALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYF 80 AL +F + C+ + R + ++ E+Y E + + + F +A F Sbjct: 7 ALCLFLVLPCGCYARVPSFEPFRGAIAPNRYTPKHSPELYFEMGDKYFQAKKFKQALLCF 66 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VY 134 + FP + K+ + G A +Y + +Y + Sbjct: 67 GMITHHFPEHALHPKAQFLVGLCYLEMGHPDLADKALTQYQEL----ADTEYSEQLFAIK 122 Query: 135 YLVGMSYAQMIR-------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 Y + S+A R P +A L+ IV ++ + + Sbjct: 123 YSIAQSFANGKRKNIVPLEGFPKLLKADTDALRIFEEIVTASSD----ADLKASALYAKG 178 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA---------MARLVEAYV 238 L R EY AI + V + + E+ + L E Y Sbjct: 179 ALL----------FDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228 Query: 239 ALALMDEAREVVSLIQERYPQ 259 + +AR + +++++P Sbjct: 229 E-QYLQDARMNAAALRKQHPN 248 >gi|255530277|ref|YP_003090649.1| tetratricopeptide domain-containing protein [Pedobacter heparinus DSM 2366] gi|255343261|gb|ACU02587.1| Tetratricopeptide TPR_3 [Pedobacter heparinus DSM 2366] Length = 602 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 37/137 (27%), Gaps = 7/137 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 ++Y A + KA + + FP + L+ + + + + Sbjct: 467 QTPTDSNALKMYADAEMLQFRNLPMKAIAKLDSINIAFPNNSLTDDILMAKSKIYIKSNE 526 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 +A + + I S D + + + +++ Y Sbjct: 527 TDKAVAALKAIIDLKDSSIWADDAL-------FTLADLYEKSGKDNEQAKNLYQKLINDY 579 Query: 170 TNSPYVKGARFYVTVGR 186 S Y AR R Sbjct: 580 PGSMYTAEARKRFRKLR 596 >gi|302035770|ref|YP_003796092.1| hypothetical protein NIDE0388 [Candidatus Nitrospira defluvii] gi|300603834|emb|CBK40166.1| exported protein of unknown function, TPR domain [Candidatus Nitrospira defluvii] Length = 173 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 47/148 (31%), Gaps = 8/148 (5%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 I V + + ++ S +Y++ + + +++ A F Sbjct: 13 GICVILALIGNFTTVPTLFAASPQPPDDAHRLYDRVMEEFRHKDYPAALAGFRFFLELHG 72 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 + ++ + QY G+Y+ A I+ YP S+ + + I + Sbjct: 73 QSSLSANAQYWKGECQYRMGRYKDALDSFYSLISDYPMSQKLA--------ASTLKIGQI 124 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVK 176 Q R+ +Y +S + Sbjct: 125 YTKQGDRDKAQMMFERVTGQYPDSAEAE 152 Score = 35.9 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 37/104 (35%), Gaps = 14/104 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L +E + S A+++ + + G Y A+ F + Sbjct: 59 AALAGFRFFLELHGQSSLSANAQYWKGECQ--------------YRMGRYKDALDSFYSL 104 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 +++Y ++ + ++ + Y D+A+ + + +YP Sbjct: 105 ISDYPMSQKLAASTLKIGQIYTKQGDRDKAQMMFERVTGQYPDS 148 >gi|289192835|ref|YP_003458776.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22] gi|288939285|gb|ADC70040.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22] Length = 336 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 66/201 (32%), Gaps = 40/201 (19%) Query: 62 EKAVLFLKEQNFSKAYEYF----NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +K LK KA EYF + ++ K+L Y+ + A Sbjct: 137 KKGYALLKLNKPKKAMEYFKIALEKDKNNY-------KALFGLGEAYYNLNDEENAIKYF 189 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E+ + P+ K +G Y + + R + Y K Sbjct: 190 EKVLELNPDDKE---ALEYLGDIYYE----------------EDYERAINYY------KK 224 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A + N + ++I Y++ +Y A+ F+ L D EE + Y Sbjct: 225 ALELKSDDINLI----LKIAYSYMELKKYKEALKYFKKALKLNPDVFKLEEIFEFMGRIY 280 Query: 238 VALALMDEAREVVSLIQERYP 258 + L ++A E ++E P Sbjct: 281 IYLGEDEKAMEYFEKLKEINP 301 >gi|319952096|ref|YP_004163363.1| tetratricopeptide tpr_1 repeat-containing protein [Cellulophaga algicola DSM 14237] gi|319420756|gb|ADV47865.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga algicola DSM 14237] Length = 1005 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 60/208 (28%), Gaps = 38/208 (18%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ-------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 Y K + + A F + + L +++ KY A Sbjct: 505 YSLGYTNFKLKEYVNAATNFAAYASGSTDVDKKH-------DAYLRLGDSYFASSKYWPA 557 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + DY + +SY D+ ATK ++ ++ + RY S Sbjct: 558 IEAYNQ--ALEGAGSEKDYAAFQKALSYG------FVDRAATK--IEELNAFIGRYPKST 607 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 E+G Y++ + + + +++ Y + +A+ R Sbjct: 608 LKDDVL--------------FELGNSYVRGNKEEEGLKVYDKLISEYKGSSLVPQAIVRQ 653 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGY 261 Y D+A + YP Sbjct: 654 GLVYYNSNRSDQALVKFKTVVRDYPDTQ 681 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 62/212 (29%), Gaps = 34/212 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSR---DFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y L +A + + +P + + L K ++ + Sbjct: 574 YAAFQKALSYGFVDRAATKIEELNAFIGRYPKSTLKDDVLFELGNSYVRGNKEEEGLKVY 633 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 ++ I++Y S V G+ Y R L +V Y ++ Sbjct: 634 DKLISEYKGSSLVPQAIVRQGLVYYNSNRS--------DQALVKFKTVVRDYPDTQEAVQ 685 Query: 178 A--RFYVTVG-RNQLAAK---------------EVEIGRYYLKRGEYVA-----AIPRFQ 214 A + +++ E++ + +Y+ A+ +Q Sbjct: 686 AVTTAKLIYVDLGRVSEYAEWVRGLDFVEVTDAELDNATFQSADQKYIEGNREQALKGYQ 745 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 L + HA +A L + Y A D+A Sbjct: 746 AYLKEFPKGLHALKANFNLAQLYFAQGDKDKA 777 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 42/175 (24%), Gaps = 27/175 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI-T 122 + + A Y + + Y G Y A + I Sbjct: 251 GESYFNLNQYENAIPYL--LDYQGRNGKFSNTDYYFLGYSYYKKGDYANAIQQFNKIIGG 308 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 S+N YY + Y ++ + L + Y + Sbjct: 309 TNSVSQN---AYYHLAECYLKLDKKP--------EALNAFRNASQM----EYTPEIQKDA 353 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 + +L+ Y Y L Y EH E LV++Y Sbjct: 354 FLNYARLS---------YEIGNAYENVPSVLTNYLEKYPKDEHTTEIQELLVDSY 399 >gi|310792567|gb|EFQ28094.1| hypothetical protein GLRG_03238 [Glomerella graminicola M1.001] Length = 478 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 14/139 (10%), Positives = 36/139 (25%), Gaps = 23/139 (16%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++ A E + + + P ++ A Y A + Sbjct: 13 NDGNKAFAAHDWPTAIELYTKAIELNDKEP-TFYTNRAQ-----ANIKAEAYGYAIADCT 66 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + I P+ Y+ G++ +R K + + N+ A Sbjct: 67 KAIELNPKFVK---AYFRRGLAQTACLR--------PKDAVADFKECLRLDPNNK---DA 112 Query: 179 RFYVTVGRNQLAAKEVEIG 197 + + + + + Sbjct: 113 KLKLDECKKIVRKLDFFAA 131 >gi|149173314|ref|ZP_01851945.1| O-linked GlcNAc transferase [Planctomyces maris DSM 8797] gi|148848120|gb|EDL62452.1| O-linked GlcNAc transferase [Planctomyces maris DSM 8797] Length = 316 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 60/184 (32%), Gaps = 13/184 (7%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-SLLMSAFVQYSAGKYQQAASL 116 E+Y++A K + KA E + + P A K + + A + +Y +A Sbjct: 7 SELYQQARTLQKSREIVKAIEIYERILSIKP----AEKKAHVSIATAYFQLQQYPEAIKH 62 Query: 117 GEEYITQYP--ESKNVDY-VYYLVGMSYAQMIRDVPYD--QRATKLMLQYMSRIVERYTN 171 EE P S ++ Y M + DV Q+ K + + + Sbjct: 63 FEEMTRLAPMDASPYINMGAIYNR-MGEYKTALDVLRKAVQKDKKSADAFYNMGIAHKGL 121 Query: 172 SPY--VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 + A V Q+ +G YL+ + A F L + A A Sbjct: 122 NQLSMAVTAYKQAIVINGQMVDAYFNLGNVYLEMKNHSQAHSSFTRALEISPGFKKARNA 181 Query: 230 MARL 233 M L Sbjct: 182 MKIL 185 >gi|108563643|ref|YP_627959.1| paralysed flagella protein [Helicobacter pylori HPAG1] gi|107837416|gb|ABF85285.1| paralysed flagella protein [Helicobacter pylori HPAG1] Length = 801 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 186 PLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTMFKKDLYLLEIIALGQLG 245 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP N+ Y V + + K ++Y RI+ Sbjct: 246 IKKSLLIDIGTQWIKNYPTDPNIPEALYYVAKALDEN--------NNYKQAMRYYKRILL 297 Query: 168 RYTNSPYVKGARFYVTV 184 Y NS Y A+ + + Sbjct: 298 EYKNSRYAPLAQMRLAI 314 Score = 43.2 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 215 RTISRAFKNYPQTMFKKDLYLLEIIALGQLGIKKSLLIDIGTQWIKNYPTDPNIPEALYY 274 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 275 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 313 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 37/113 (32%), Gaps = 13/113 (11%) Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D +A L+ +SR + Y + + K +A ++ I + L I Sbjct: 206 DSQAYFDALRTISRAFKNYPQTMFKKD-----LYLLEIIALGQLGIKKSLL--------I 252 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + NY + EA+ + +A +A I Y +A Sbjct: 253 DIGTQWIKNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYKNSRYA 305 >gi|293609245|ref|ZP_06691547.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827697|gb|EFF86060.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 291 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 17/120 (14%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209 Q K + M ++ + NS Y A F++ + L Y A Sbjct: 186 QGGAKKAIAPMQNFIKNHPNSVYTGNAYFWL--------------AEFNLATDPVNYNEA 231 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + +V Y ++ A A+ +L A A + + I +YP+ A++ Sbjct: 232 KKNYNVVATQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKAKILSQYPKSEEAKFFNK 291 Score = 42.4 bits (99), Expect = 0.068, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 46/137 (33%), Gaps = 9/137 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 +S + V ++ Y A+ K+ KA ++ P + + A Sbjct: 158 ASSPATQNQSNPVELEKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSVYTGNAYFWLA 217 Query: 102 FVQYSAG--KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + Y +A TQYP S Y + + +DV + T Sbjct: 218 EFNLATDPVNYNEAKKNYNVVATQYPNSSKAPRALYQL----YSIAKDVD---KNTVSAN 270 Query: 160 QYMSRIVERYTNSPYVK 176 QY ++I+ +Y S K Sbjct: 271 QYKAKILSQYPKSEEAK 287 Score = 38.6 bits (89), Expect = 0.87, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 8/79 (10%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163 Y G ++A + + +I +P S VY G +Y + ++ D + + Sbjct: 184 YKQGGAKKAIAPMQNFIKNHPNS-----VY--TGNAYFWLAEFNLATDPVNYNEAKKNYN 236 Query: 164 RIVERYTNSPYVKGARFYV 182 + +Y NS A + + Sbjct: 237 VVATQYPNSSKAPRALYQL 255 >gi|256823063|ref|YP_003147026.1| tol-pal system protein YbgF [Kangiella koreensis DSM 16069] gi|256796602|gb|ACV27258.1| tol-pal system protein YbgF [Kangiella koreensis DSM 16069] Length = 243 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 50/141 (35%), Gaps = 23/141 (16%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A+++ AF ++ KY QA S + +++ YP+ +YL+G + Sbjct: 123 AQQA-YNQAFTLFNEQKYPQAKSAFKTFVSDYPKDSLASNAHYLLGQLHFSD-------- 173 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + + E++ ++ A + + +G+ AA Sbjct: 174 KEYAEAENQFKAVYEQFPDTSIKDKAMLKLAQVQEL--------------KGDKAAAKAT 219 Query: 213 FQLVLANYSDAEHAEEAMARL 233 +Q V + + A A+L Sbjct: 220 YQQVSKLFPNTTAGRLAKAKL 240 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 31/88 (35%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + + + D D Y L ++ +++A F FP + K++L Sbjct: 142 AKSAFKTFVSDYPKDSLASNAHYLLGQLHFSDKEYAEAENQFKAVYEQFPDTSIKDKAML 201 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPE 126 A VQ G A + ++ +P Sbjct: 202 KLAQVQELKGDKAAAKATYQQVSKLFPN 229 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 57/144 (39%), Gaps = 8/144 (5%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS + + ++ Y +A EQ + +A F D+P +A + + Sbjct: 108 SSDNANTSNNGASNRAQQAYNQAFTLFNEQKYPQAKSAFKTFVSDYPKDSLASNAHYLLG 167 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + +S +Y +A + + Q+P++ D M ++++ D+ A K Q Sbjct: 168 QLHFSDKEYAEAENQFKAVYEQFPDTSIKD-----KAMLKLAQVQELKGDKAAAKATYQ- 221 Query: 162 MSRIVERYTNSPYVKGARFYVTVG 185 ++ + + N+ + A+ + Sbjct: 222 --QVSKLFPNTTAGRLAKAKLDTL 243 Score = 43.6 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 40/116 (34%), Gaps = 8/116 (6%) Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV--TVGRNQLAAK-EVEIGRYYLKRG 204 Q+A + ++Y K A ++ LA+ +G+ + Sbjct: 120 SNRAQQAYNQAFTLFNE--QKYPQ---AKSAFKTFVSDYPKDSLASNAHYLLGQLHFSDK 174 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 EY A +F+ V + D ++AM +L + A+ + + +P Sbjct: 175 EYAEAENQFKAVYEQFPDTSIKDKAMLKLAQVQELKGDKAAAKATYQQVSKLFPNT 230 >gi|197117672|ref|YP_002138099.1| type II secretion system secretin lipoprotein PulQ [Geobacter bemidjiensis Bem] gi|197087032|gb|ACH38303.1| type II secretion system secretin lipoprotein PulQ [Geobacter bemidjiensis Bem] Length = 868 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 59/198 (29%), Gaps = 42/198 (21%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +++ L + + L G R + KA +E N A Sbjct: 1 MHRPRLILTVMLVALALSGCTSG----------------RTAFSKAEKLEREGNLDAALV 44 Query: 79 YFNQCSRDFP-FAGVARKSLLMS----AFVQYSAGK-------YQQAASLGEEYITQY-- 124 + + + P K LL A + G+ Y +A E+ + Y Sbjct: 45 KYAEVAAANPDIGEYRVK-LLNVTETAARAHFKKGEEFFAKKNYDEAL---REFQSAYAM 100 Query: 125 -PES----KNVDYVYYLV-GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 P D V L +Y Q D +++ + + +E ++ VK Sbjct: 101 DPTHVLAKNQADQVLKLRNAQTYLQEGLDFEKNRKP-REAMIAFKHALEFDPSNKEVKEG 159 Query: 179 RFYVTV-GRNQLAAKEVE 195 + R +L E+ Sbjct: 160 LDRIIANKRQKLDGFELN 177 >gi|110639871|ref|YP_680081.1| hypothetical protein CHU_3505 [Cytophaga hutchinsonii ATCC 33406] gi|110282552|gb|ABG60738.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406] Length = 602 Score = 47.0 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 55/144 (38%), Gaps = 10/144 (6%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 + + LDS TD Y L L ++ + +A + N + +P + + A Sbjct: 465 TENSGLDSTTDALKD---YSAIQLLLFQRKYDEALQAANALLKQYPHHELTDDVYWLQAT 521 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + GK +A + ++ T Y + D + YD + T+ +Q Sbjct: 522 ILRQTGKPTEALEMLKKISTGYADDLLGDDAL-------FTSAQIFDYDLKNTEKAMQLY 574 Query: 163 SRIVERYTNSPYVKGARFYVTVGR 186 + +YTNS YV AR + R Sbjct: 575 QDFLIQYTNSVYVTEARKRFRILR 598 >gi|255531102|ref|YP_003091474.1| tetratricopeptide domain-containing protein [Pedobacter heparinus DSM 2366] gi|255344086|gb|ACU03412.1| Tetratricopeptide domain protein [Pedobacter heparinus DSM 2366] Length = 208 Score = 47.0 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 51/166 (30%), Gaps = 22/166 (13%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + + + ++ A + + L M + + G ++ + IT Sbjct: 30 GMQAMMKGDYKVAVNQLEKADAK---SPNNAAVLKMLGYSYFQCGDFENSIKTYSNLITL 86 Query: 124 YPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKL-----MLQYMSRIVERYTNSPYVKG 177 P DY YY G + + D + ++ + +E N Sbjct: 87 KPS----DYSAYYYRGKARQNVANDPKESLNNLRENFYLAAIKDFGKAIEI--NGEEDPQ 140 Query: 178 ARFYVTVGRNQLAAKEVEIGRYY-LKRGEYVAA-IPRFQLVLANYS 221 LA K+ I + Y +K AA I F +A++ Sbjct: 141 LLQ-----NRALAYKDYAIYKSYKIKTKAEKAACIALFNNSIADFQ 181 >gi|90022602|ref|YP_528429.1| cellulose binding, type IV [Saccharophagus degradans 2-40] gi|89952202|gb|ABD82217.1| Tetratricopeptide TPR_2 [Saccharophagus degradans 2-40] Length = 952 Score = 47.0 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 31/244 (12%), Positives = 83/244 (34%), Gaps = 40/244 (16%) Query: 45 DVYLDSVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + L+ + E +Y+ A + E KA + + P+ ++ A + Sbjct: 106 EKILEKYPNSPDNAEVLYQLAKAYDMEGEQEKALRMLTELTSKHPYYPNLAEAWFRVADI 165 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 +S +Y QA ++ + V+ +Y++G ++ + + + L + Sbjct: 166 HFSNQRYDQAKHAYQQVTHLNTGTLWVN-AHYMLGWTHYKQFQ--------YEKSLDSYA 216 Query: 164 RIVERYTNSPYVKGARFY------------VTVGRNQLAAKEV----------------- 194 ++ Y +++ ++LA E Sbjct: 217 NVLNTYLAGKESAEGLGKAEKPVVEDTLHSISLSLDKLAGAETIPNVPGLVGRSYVWMLY 276 Query: 195 -EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 ++G +YL++ + A+ ++ + ++ A ++ A++ A E +L Sbjct: 277 KKLGDFYLEKELFGEAVNSYRAYIDANPSSQRAPVFHNMVINAHIKGGFPALALEEKALY 336 Query: 254 QERY 257 + Y Sbjct: 337 VKAY 340 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 19/164 (11%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++ + DV V+ + K+ + +A + + + +P + + L A Sbjct: 69 KEQIERRIADVYMMESVHTQHQDVEKKSYYLEAIKEYEKILEKYPNSPDNAEVLYQLAKA 128 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 G+ ++A + E +++P N+ ++ V + R YDQ K Q ++ Sbjct: 129 YDMEGEQEKALRMLTELTSKHPYYPNLAEAWFRVADIHFSNQR---YDQ--AKHAYQQVT 183 Query: 164 RIV--------------ERYTNSPYVKGARFYVTVGRNQLAAKE 193 + Y Y K Y V LA KE Sbjct: 184 HLNTGTLWVNAHYMLGWTHYKQFQYEKSLDSYANVLNTYLAGKE 227 Score = 43.6 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 30/57 (52%) Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 K+ Y+ AI ++ +L Y ++ E + +L +AY ++A +++ + ++P Sbjct: 94 KKSYYLEAIKEYEKILEKYPNSPDNAEVLYQLAKAYDMEGEQEKALRMLTELTSKHP 150 >gi|311695031|gb|ADP97904.1| tetratricopeptide TPR_2 repeat protein [marine bacterium HP15] Length = 947 Score = 47.0 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 34/229 (14%), Positives = 65/229 (28%), Gaps = 46/229 (20%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSR 85 F + L + + Y+ VY++ + L L+ + +S A + F Sbjct: 257 LFRVVGLSLSYLDGAETLQALFRQTGGRPYEILVYDRYSELLLEREQYSDAIDVFEAYIE 316 Query: 86 DFPFAGVARK-------------------------SLLMSAFVQYSAGKYQQAASLGEEY 120 D P + A + L + Y A E+ Sbjct: 317 DHPESPWAPRYHIRIIDTLELAGFTRTIPERKAGFVSLYGIYSDYWQSAGPDAIGFIEQ- 375 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + YL+ + D D + Y + + + P Sbjct: 376 -QLEQLLPELADRQYLLA---GEAEDDQQAD-DHYRKAASYYAEFAATFPDHPRTPE--- 427 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 + + G YL+ ++ AAI F+ V +Y + A+ A Sbjct: 428 RLFLL-----------GETYLELEDWPAAIAAFERVAYDYPEDTVADRA 465 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 8/74 (10%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 + A + +++YPE + D +YY + ++ AT L+ ++ +V Sbjct: 105 DELSGAIDAYQRLLSEYPEREGNDQIYYQLARAWELR--------GATPQQLEALNTLVR 156 Query: 168 RYTNSPYVKGARFY 181 RY +S Y A+F Sbjct: 157 RYPDSEYWVEAQFR 170 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 46/160 (28%), Gaps = 11/160 (6%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y A + E YI +PES Y + + + K + I Sbjct: 302 EQYSDAIDVFEAYIEDHPESPWAP--RYHIRIIDTLELAGFTRTIPERKAGFVSLYGIYS 359 Query: 168 RYTNSPYVKGA----RFYVTVGRNQLAAKEVEIG----RYYLKRGEYVAAIPRFQLVLAN 219 Y S A + +LA ++ + Y A + A Sbjct: 360 DYWQSA-GPDAIGFIEQQLEQLLPELADRQYLLAGEAEDDQQADDHYRKAASYYAEFAAT 418 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + D E + L E Y+ L A + YP+ Sbjct: 419 FPDHPRTPERLFLLGETYLELEDWPAAIAAFERVAYDYPE 458 Score = 35.9 bits (82), Expect = 6.4, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 64/206 (31%), Gaps = 23/206 (11%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 + D S VY +A N A F + P + + + +A Sbjct: 586 AEDDERRSGVRENLAAAVYRQAEQLADAGNVEAAVSEFLRVGTAVPESALRANAEYDAAS 645 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + +A ++QA + + +P + +D V + ++Y + + + Sbjct: 646 LLITANLWEQAIGVLTSFRRSFPNHELIDTVPAKLALAY--------RETEQWERAADEL 697 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 ++V K R L + Y + G AI ++ ++ + Sbjct: 698 QQMVSL------AKTPEER----RENL----LIAAELYDQAGNREKAIDTWRNYANSHPE 743 Query: 223 -AEHAEEAMARLVEAYVALALMDEAR 247 + EA RL E Y + Sbjct: 744 PTDVYMEAANRLAELYQEDGDAESRD 769 >gi|261400856|ref|ZP_05986981.1| putative periplasmic protein [Neisseria lactamica ATCC 23970] gi|269209327|gb|EEZ75782.1| putative periplasmic protein [Neisseria lactamica ATCC 23970] Length = 237 Score = 47.0 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 44/130 (33%), Gaps = 11/130 (8%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S V + +Y +A+ + FS A +A++S+ + + G Sbjct: 111 SAHTVETAQNLYNQALKHYQSGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 169 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168 + +G Y ++ +S + +G + +D+ +++ Sbjct: 170 CESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIAR---------ATWRSLIQT 220 Query: 169 YTNSPYVKGA 178 Y SP K A Sbjct: 221 YPGSPAAKRA 230 Score = 38.9 bits (90), Expect = 0.72, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 7/57 (12%) Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 RF+ D+ A EAM ++ E L D AR + + YP A+ Sbjct: 181 ANRFK-------DSPTAPEAMFKIGECQYRLQQKDIARATWRSLIQTYPGSPAAKRA 230 >gi|149918743|ref|ZP_01907230.1| hypothetical protein PPSIR1_31713 [Plesiocystis pacifica SIR-1] gi|149820344|gb|EDM79760.1| hypothetical protein PPSIR1_31713 [Plesiocystis pacifica SIR-1] Length = 304 Score = 47.0 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 16/120 (13%), Positives = 34/120 (28%), Gaps = 4/120 (3%) Query: 5 LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64 L I L A + + +C + + + + +VY + Sbjct: 7 LLLTIDPRPLHERALDTGARLLAAGVCLCLASAPLPALAAPAEDEGIDTEKKAMDVYNQG 66 Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 ++ +A + F + FP S ++QA + Y+ Y Sbjct: 67 KEAYDSGDYDEALQLFLEAQSLFPSPVF----HYNIGLCHESLENFEQAIISYKAYLRSY 122 >gi|296132638|ref|YP_003639885.1| Tetratricopeptide TPR_2 repeat protein [Thermincola sp. JR] gi|296031216|gb|ADG81984.1| Tetratricopeptide TPR_2 repeat protein [Thermincola potens JR] Length = 217 Score = 47.0 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 44/123 (35%), Gaps = 14/123 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + + + + +N+ KA ++ PF + + + K+QQA + E Sbjct: 107 FNLGLAYKETKNYDKAITLMEGIVKENPFHFLGI---VNLGVLYDQKNKFQQALQMYERA 163 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + P VY L G +YA M + L+ +++ + + A+ Sbjct: 164 LQINPG---AADVYLLRGQTYAHM--------GDKQKALENINQALRFVPDYKEALDAKK 212 Query: 181 YVT 183 + Sbjct: 213 EIE 215 >gi|261416282|ref|YP_003249965.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372738|gb|ACX75483.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 1292 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 29/215 (13%), Positives = 66/215 (30%), Gaps = 38/215 (17%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +++KA +K + + + +P +A K++ +A + +Y++A E Sbjct: 662 LFQKAESSVKAGKNEAGAKAYLDLVKRYPNIDIADKAIFEAAAAYEATNQYKKA---AET 718 Query: 120 YITQYPESKNVDYVY-------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 ++ P+S Y L S + + + I + + Sbjct: 719 FMLL-PKS----YAKSPLTVKGILRAASNYKKDKQPV-------QAAKTFLFITDNFPQ- 765 Query: 173 PYVKGARFYVTVGRNQLAAKEV-EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 + +A + + Y + A F+L Y E + Sbjct: 766 --------------DSMAFSAIGFAAQTYDSIPDKKQAAITFELAYKRYPQNEETPSFLY 811 Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 +Y + +EA + YP+ +A Sbjct: 812 SACLSYDEAKMTNEAIRCSKDLVRDYPKSSYAVDA 846 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 32/234 (13%), Positives = 70/234 (29%), Gaps = 60/234 (25%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + ++E A + + KA E F + + + + K +L +A + QAA Sbjct: 695 ADKAIFEAAAAYEATNQYKKAAETFMLLPKSYAKSPLTVKGILRAASNYKKDKQPVQAAK 754 Query: 116 LG----EEY---------------------------------ITQYPESKNVDYVYYLVG 138 + + +YP+++ Y Sbjct: 755 TFLFITDNFPQDSMAFSAIGFAAQTYDSIPDKKQAAITFELAYKRYPQNEETPSFLYSAC 814 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY + + T ++ +V Y S Y A F + + Sbjct: 815 LSYDEA--------KMTNEAIRCSKDLVRDYPKSSYAVDAAFSIPMA------------- 853 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR-LVEAYVALALMDEAREVVS 251 Y ++ AI ++ + Y + + A + AY + M+ + + Sbjct: 854 -YANAKKWDLAIQEYRNFIKMYQEDKEKLIAAYIGIARAYRNVKDMESSVDAYK 906 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 39/115 (33%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + +Y + + + + ++A RD+P + A + +A K+ Sbjct: 801 PQNEETPSFLYSACLSYDEAKMTNEAIRCSKDLVRDYPKSSYAVDAAFSIPMAYANAKKW 860 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 A +I Y E K Y+ + ++D+ A K L+ + Sbjct: 861 DLAIQEYRNFIKMYQEDKEKLIAAYIGIARAYRNVKDMESSVDAYKKTLEAYDKY 915 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 58/210 (27%), Gaps = 34/210 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQ---------YSAGKYQ 111 A L+ ++ F + + + + + A AGK + Sbjct: 617 AQSLLESNQLDESLTEFEWLLKQYKAKETRNDSMAAEIEKAIAYVLFQKAESSVKAGKNE 676 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + + +YP D + +Y + K + + + Y Sbjct: 677 AGAKAYLDLVKRYPNIDIADKAIFEAAAAYEATNQ--------YKKAAETFMLLPKSYAK 728 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 SP Y K + V A F + N+ A A+ Sbjct: 729 SPLTVKGILR--------------AASNYKKDKQPVQAAKTFLFITDNFPQDSMAFSAIG 774 Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGY 261 + Y ++ +A L +RYPQ Sbjct: 775 FAAQTYDSIPDKKQAAITFELAYKRYPQNE 804 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 5/96 (5%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + + +Y+ A + KAY+ Q RDFP G+ K+ L A + K+ Sbjct: 168 PKEAKAPTVIYQAAAVQEASGEDDKAYKLRMQLVRDFPDNGLVPKAWLRIAEYHFMNRKF 227 Query: 111 QQAASLGEE---YITQYPESKNVDYVYYLVGMSYAQ 143 + A ++ + K Y + SY Sbjct: 228 KDAIGAYKKVTGFENL--TGKEAALAMYHLAESYYN 261 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 56/187 (29%), Gaps = 40/187 (21%) Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Q++ EYI +YP+ V Y D + ++V Sbjct: 152 DHQKSLGYFLEYIDKYPKEAKAPTVIYQAAAVQEASGED--------DKAYKLRMQLVRD 203 Query: 169 YTNSPYVKGARFYVTV-------------------GRNQLAAKE-----VEIGRYYLKRG 204 + ++ V A + G L KE + Y Sbjct: 204 FPDNGLVPKAWLRIAEYHFMNRKFKDAIGAYKKVTGFENLTGKEAALAMYHLAESYYNTA 263 Query: 205 EY-VAAIPRFQLVL----ANYSDAEHAEEAMARLVEAYVAL--ALMDEAREVVSLIQERY 257 EY +AA F ++ Y + + EAM + ++ L + EA + + + Sbjct: 264 EYEIAAKQYFDYIVGADKGKYPN-DLRAEAMDFMAASFSDLEGGGVQEAEAFLRDKKVPF 322 Query: 258 PQGYWAR 264 + R Sbjct: 323 KDSVYYR 329 >gi|149921540|ref|ZP_01909991.1| hypothetical protein PPSIR1_19609 [Plesiocystis pacifica SIR-1] gi|149817615|gb|EDM77083.1| hypothetical protein PPSIR1_19609 [Plesiocystis pacifica SIR-1] Length = 280 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 50/145 (34%), Gaps = 8/145 (5%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 + S E+ +A + +KA + + +FP + A SL+ Sbjct: 143 KPSPQAKASPGLSPASAAELLRRATQARRSGEAAKAVALYERLVAEFPDSREAALSLVAR 202 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 ++ S + A E Y+ + PE VG++ + + D + Q Sbjct: 203 GKLELSRERPGAARLAFERYLGEQPEGVLAPEA--RVGVAESHALDG---DPSKERAAWQ 257 Query: 161 YMSRIVERYTNSPYVKGARFYVTVG 185 +V+ + S YV AR + Sbjct: 258 A---VVDHHPRSVYVGKARARLEAL 279 >gi|327399453|ref|YP_004340322.1| hypothetical protein Hipma_1305 [Hippea maritima DSM 10411] gi|327182082|gb|AEA34263.1| Tetratricopeptide TPR_1 repeat-containing protein [Hippea maritima DSM 10411] Length = 697 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 48/155 (30%), Gaps = 15/155 (9%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 S Y ++ + +N+ A +F + +P + + + Sbjct: 101 SENTFSPAQKFKQTYDETLFFSGIRAFYIKNYRLAAAFFKEIVTKYPSSSFFINAYFLLG 160 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + +Y +A E I P++ V + I D+ ++ Sbjct: 161 DCYKNIKEYDKAIKTYNEAIHFAPKNSAVAQTLF--------SIADIYEKKKMFMSARNI 212 Query: 162 MSRIVERYTNSPYVKGARFYVTV-------GRNQL 189 RIV+ Y ++ + A F + RN L Sbjct: 213 YKRIVKEYADTKWSYQAEFMLGYSYYKENRCRNAL 247 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 14/118 (11%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + +L + IV +Y +S + A +G Y EY AI Sbjct: 130 KNYRLAAAFFKEIVTKYPSSSFFINAY--------------FLLGDCYKNIKEYDKAIKT 175 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + + + + + + Y + AR + I + Y W+ E ++ Sbjct: 176 YNEAIHFAPKNSAVAQTLFSIADIYEKKKMFMSARNIYKRIVKEYADTKWSYQAEFML 233 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 66/216 (30%), Gaps = 51/216 (23%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A F++ N +A + N+ + P+ ++ + Y G Y +A Sbjct: 523 AKYFVEMGNNMRALDVMNKLPQQKPYNNYTD---MIFGDINYYNGDYNKA---------- 569 Query: 124 YPESKNVDYVYYLVGMSYAQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 Y +Y + Q I V Y + K +S+IV + Y Sbjct: 570 --------YEFYQKALETKQPLMADYLRLRIARVLYHMKKYKEAENILSKIVAK----IY 617 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 + + K Y AI V N + E+ + Sbjct: 618 SDEVTYLKGLCE--------------YKLNHYKDAIEILSNVENN---LKFKEKVLFYKA 660 Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 Y+ L +ARE ++ YP + ++ L+ Sbjct: 661 LGYLKLGNTKKAREAYDNLKRTYPHSDYVNILKALL 696 >gi|156072334|gb|ABU45489.1| TPR domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302325631|gb|ADL24832.1| tetratricopeptide repeat protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 1292 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 29/215 (13%), Positives = 66/215 (30%), Gaps = 38/215 (17%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +++KA +K + + + +P +A K++ +A + +Y++A E Sbjct: 662 LFQKAESSVKAGKNEAGAKAYLDLVKRYPNIDIADKAIFEAAAAYEATNQYKKA---AET 718 Query: 120 YITQYPESKNVDYVY-------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 ++ P+S Y L S + + + I + + Sbjct: 719 FMLL-PKS----YAKSPLTVKGILRAASNYKKDKQPV-------QAAKTFLFITDNFPQ- 765 Query: 173 PYVKGARFYVTVGRNQLAAKEV-EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 + +A + + Y + A F+L Y E + Sbjct: 766 --------------DSMAFSAIGFAAQTYDSIPDKKQAAITFELAYKRYPQNEETPSFLY 811 Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 +Y + +EA + YP+ +A Sbjct: 812 SACLSYDEAKMTNEAIRCSKDLVRDYPKSSYAVDA 846 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 32/234 (13%), Positives = 70/234 (29%), Gaps = 60/234 (25%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + ++E A + + KA E F + + + + K +L +A + QAA Sbjct: 695 ADKAIFEAAAAYEATNQYKKAAETFMLLPKSYAKSPLTVKGILRAASNYKKDKQPVQAAK 754 Query: 116 LG----EEY---------------------------------ITQYPESKNVDYVYYLVG 138 + + +YP+++ Y Sbjct: 755 TFLFITDNFPQDSMAFSAIGFAAQTYDSIPDKKQAAITFELAYKRYPQNEETPSFLYSAC 814 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +SY + + T ++ +V Y S Y A F + + Sbjct: 815 LSYDEA--------KMTNEAIRCSKDLVRDYPKSSYAVDAAFSIPMA------------- 853 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR-LVEAYVALALMDEAREVVS 251 Y ++ AI ++ + Y + + A + AY + M+ + + Sbjct: 854 -YANAKKWDLAIQEYRNFIKMYQEDKEKLIAAYIGIARAYRNVKDMESSVDAYK 906 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 39/115 (33%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + +Y + + + + ++A RD+P + A + +A K+ Sbjct: 801 PQNEETPSFLYSACLSYDEAKMTNEAIRCSKDLVRDYPKSSYAVDAAFSIPMAYANAKKW 860 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 A +I Y E K Y+ + ++D+ A K L+ + Sbjct: 861 DLAIQEYRNFIKMYQEDKEKLIAAYIGIARAYRNVKDMESSVDAYKKTLEAYDKY 915 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 58/210 (27%), Gaps = 34/210 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQ---------YSAGKYQ 111 A L+ ++ F + + + + + A AGK + Sbjct: 617 AQSLLESNQLDESLTEFEWLLKQYKAKETRNDSMAAEIEKAIAYVLFQKAESSVKAGKNE 676 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + + +YP D + +Y + K + + + Y Sbjct: 677 AGAKAYLDLVKRYPNIDIADKAIFEAAAAYEATNQ--------YKKAAETFMLLPKSYAK 728 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 SP Y K + V A F + N+ A A+ Sbjct: 729 SPLTVKGILR--------------AASNYKKDKQPVQAAKTFLFITDNFPQDSMAFSAIG 774 Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGY 261 + Y ++ +A L +RYPQ Sbjct: 775 FAAQTYDSIPDKKQAAITFELAYKRYPQNE 804 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 5/96 (5%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + + +Y+ A + KAY+ Q RDFP G+ K+ L A + K+ Sbjct: 168 PKEAKAPTVIYQAAAVQEASGEDDKAYKLRMQLVRDFPDNGLVPKAWLRIAEYHFMNRKF 227 Query: 111 QQAASLGEE---YITQYPESKNVDYVYYLVGMSYAQ 143 + A ++ + K Y + SY Sbjct: 228 KDAIGAYKKVTGFENL--TGKEAALAMYHLAESYYN 261 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 56/187 (29%), Gaps = 40/187 (21%) Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Q++ EYI +YP+ V Y D + ++V Sbjct: 152 DHQKSLGYFLEYIDKYPKEAKAPTVIYQAAAVQEASGED--------DKAYKLRMQLVRD 203 Query: 169 YTNSPYVKGARFYVTV-------------------GRNQLAAKE-----VEIGRYYLKRG 204 + ++ V A + G L KE + Y Sbjct: 204 FPDNGLVPKAWLRIAEYHFMNRKFKDAIGAYKKVTGFENLTGKEAALAMYHLAESYYNTA 263 Query: 205 EY-VAAIPRFQLVL----ANYSDAEHAEEAMARLVEAYVAL--ALMDEAREVVSLIQERY 257 EY +AA F ++ Y + + EAM + ++ L + EA + + + Sbjct: 264 EYEIAAKQYFDYIVGADKGKYPN-DLRAEAMDFMAASFSDLEGGGVQEAEAFLRDKKVPF 322 Query: 258 PQGYWAR 264 + R Sbjct: 323 KDSVYYR 329 >gi|297748677|gb|ADI51223.1| Tetratricopeptide repeat family protein [Chlamydia trachomatis D-EC] gi|297749557|gb|ADI52235.1| Tetratricopeptide repeat family protein [Chlamydia trachomatis D-LC] Length = 339 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 50/165 (30%), Gaps = 22/165 (13%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++ S +Y K L + +S+A + + S FP ++ +S + A + Sbjct: 179 EEIVTASSDADLKASALYAKGALLFDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKI 238 Query: 104 Q--------YSAGKYQQAASLGEEYITQYPESK----------NVDYVYYLVGMSYAQMI 145 Y+ Q A Q+P ++ Y Sbjct: 239 HCLQALQEPYNEQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAY---ASCLYSTG 295 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 R +R Y S +E + ++ YV + Q++ Sbjct: 296 RFYEK-KRKASSAKIYYSIALENFPDTSYVAKCNKRLERLSKQMS 339 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 56/149 (37%), Gaps = 6/149 (4%) Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 A+ +LL + +Y +A ++ Q+P + L+ + PY+ Sbjct: 196 YAKGALL------FDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 249 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 ++ + + + +++ N P Y+ A+ GR+Y K+ + +A Sbjct: 250 EQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAYASCLYSTGRFYEKKRKASSAKI 309 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + + L N+ D + + RL + Sbjct: 310 YYSIALENFPDTSYVAKCNKRLERLSKQM 338 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 82/261 (31%), Gaps = 43/261 (16%) Query: 23 ALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYF 80 AL +F + C+ + R + ++ E+Y E + + + F +A F Sbjct: 28 ALCLFLVLPCGCYARVPSFEPFRGAIAPNRYTPKHSPELYFEMGDKYFQAKKFKQALLCF 87 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VY 134 + FP + K+ + G A +Y + +Y + Sbjct: 88 GMITHHFPEHALHPKAQFLVGLCYLEMGHPDLADKALTQYQEL----ADTEYSEQLFAIK 143 Query: 135 YLVGMSYAQMIR-------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 Y + S+A R P +A L+ IV ++ + + Sbjct: 144 YSIAQSFANGKRKNIVPLEGFPKLLKADTDALRIFEEIVTASSD----ADLKASALYAKG 199 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA---------MARLVEAYV 238 L R EY AI + V + + E+ + L E Y Sbjct: 200 ALL----------FDRKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 249 Query: 239 ALALMDEAREVVSLIQERYPQ 259 + +AR + +++++P Sbjct: 250 E-QYLQDARMNAAALRKQHPN 269 >gi|193077557|gb|ABO12391.2| putative signal peptide [Acinetobacter baumannii ATCC 17978] Length = 294 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 17/120 (14%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209 Q K + M ++ + NS Y A F++ ++L Y A Sbjct: 189 QGGAKKAIAPMQNFIKNHPNSIYTGNAYFWL--------------AEFHLATDPVNYNEA 234 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + +V Y ++ A A+ +L A A + + + +YP+ A++ Sbjct: 235 KKNYNVVANQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKNKLLSQYPKSEEAKFFNK 294 Score = 44.3 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 9/122 (7%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAA 114 ++ Y A+ K+ KA ++ P + + A + Y +A Sbjct: 176 EKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSIYTGNAYFWLAEFHLATDPVNYNEAK 235 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 QYP S Y + + +DV + T QY ++++ +Y S Sbjct: 236 KNYNVVANQYPNSSKAPRALYQL----YSIAKDVD---KNTVSANQYKNKLLSQYPKSEE 288 Query: 175 VK 176 K Sbjct: 289 AK 290 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 8/79 (10%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163 Y G ++A + + +I +P S G +Y + + D + + Sbjct: 187 YKQGGAKKAIAPMQNFIKNHPNSIYT-------GNAYFWLAEFHLATDPVNYNEAKKNYN 239 Query: 164 RIVERYTNSPYVKGARFYV 182 + +Y NS A + + Sbjct: 240 VVANQYPNSSKAPRALYQL 258 >gi|319953427|ref|YP_004164694.1| tetratricopeptide tpr_1 repeat-containing protein [Cellulophaga algicola DSM 14237] gi|319422087|gb|ADV49196.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga algicola DSM 14237] Length = 594 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 45/133 (33%), Gaps = 7/133 (5%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + ++Y KA L ++ +A +D + ++LL + + +A Sbjct: 464 TQTALKIYAKADLLAYQKKNKEAIATLELILKDHKGEKIEDEALLKQGQLLEKLNDFDRA 523 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 ++ I Y D Y+ + Y ++ + + +I+ Y +S Sbjct: 524 KFNYQKIIEFYGNDILADDAYFAIAQLYENQFNNI-------EKAKESYEKIIYNYQDSY 576 Query: 174 YVKGARFYVTVGR 186 Y AR R Sbjct: 577 YFPQARKNFRRLR 589 Score = 42.0 bits (98), Expect = 0.077, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 20/54 (37%), Gaps = 5/54 (9%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQA 113 Y A +L + F KA YF + + P+ + + +Y+ A Sbjct: 21 YNLAKQYLNDGEFEKAVVYFEKLVKQNPYRSDYSE----DLIACYQQLERYEDA 70 >gi|332298199|ref|YP_004440121.1| hypothetical protein Trebr_1567 [Treponema brennaborense DSM 12168] gi|332181302|gb|AEE16990.1| hypothetical protein Trebr_1567 [Treponema brennaborense DSM 12168] Length = 622 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 18/105 (17%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 LL A V Y AG+ ++AA L + + ++D +L G Y D + + Sbjct: 533 LLEQAQVAYDAGECEKAALLLDTFFAA--AGTDIDRALFLQGQVYEAQS-----DIKNIR 585 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + +++V+ Y S + A+ VT R+Y Sbjct: 586 KSIAAYTQLVQTYPQSSLWQQAKNRVTYLN-----------RFYF 619 >gi|325122509|gb|ADY82032.1| hypothetical protein BDGL_001446 [Acinetobacter calcoaceticus PHEA-2] Length = 291 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 17/120 (14%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209 Q K + M ++ + NS Y A F++ + L Y A Sbjct: 186 QGGAKKAIAPMQNFIKNHPNSVYTGNAYFWL--------------AEFNLATDPVNYNEA 231 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + +V Y ++ A A+ +L A A + + I +YP+ A++ Sbjct: 232 KKNYNVVATQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKAKILSQYPKSEEAKFFNK 291 Score = 42.0 bits (98), Expect = 0.079, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 46/137 (33%), Gaps = 9/137 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 +S + V ++ Y A+ K+ KA ++ P + + A Sbjct: 158 ASSPATQNQSNPVELEKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSVYTGNAYFWLA 217 Query: 102 FVQYSAG--KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + Y +A TQYP S Y + + +DV + T Sbjct: 218 EFNLATDPVNYNEAKKNYNVVATQYPNSSKAPRALYQL----YSIAKDVD---KNTVSAN 270 Query: 160 QYMSRIVERYTNSPYVK 176 QY ++I+ +Y S K Sbjct: 271 QYKAKILSQYPKSEEAK 287 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 8/79 (10%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163 Y G ++A + + +I +P S VY G +Y + ++ D + + Sbjct: 184 YKQGGAKKAIAPMQNFIKNHPNS-----VY--TGNAYFWLAEFNLATDPVNYNEAKKNYN 236 Query: 164 RIVERYTNSPYVKGARFYV 182 + +Y NS A + + Sbjct: 237 VVATQYPNSSKAPRALYQL 255 >gi|319781029|ref|YP_004140505.1| tol-pal system protein YbgF [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166917|gb|ADV10455.1| tol-pal system protein YbgF [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 369 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 46/143 (32%), Gaps = 22/143 (15%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 + D + ++ E+Y + F+ ++ A + F FP + Sbjct: 224 GAAPKTGKSDTVVAALPATNNPEELYRNSYQFILSGDYGTAEQGFRDHIARFP-----KD 278 Query: 96 SLLMSAFVQYSAGKYQQA----ASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDV 148 + +A Y G+ E ++ YP++K + +G+S V Sbjct: 279 AK--AADAHYWLGESLLGQQKYRDAAETFLAASKDYPKAKKAPDMLLKLGVSL------V 330 Query: 149 PYDQRATKLMLQYMSRIVERYTN 171 Q S + +RY + Sbjct: 331 GLKQHDV--ACATFSEVGKRYPD 351 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 34/102 (33%), Gaps = 14/102 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 Q + R+ A +++ L + +Y A F Sbjct: 264 AEQGFRDHIARFPKDAKAADAHYWLGESL--------------LGQQKYRDAAETFLAAS 309 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +Y A+ A + + +L + V L D A S + +RYP Sbjct: 310 KDYPKAKKAPDMLLKLGVSLVGLKQHDVACATFSEVGKRYPD 351 >gi|307637945|gb|ADN80395.1| Paralysed flagellar protein [Helicobacter pylori 908] gi|325996549|gb|ADZ51954.1| Paralysed flagella protein [Helicobacter pylori 2018] gi|325998138|gb|ADZ50346.1| Paralysed flagella protein [Helicobacter pylori 2017] Length = 801 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 186 PLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGKLG 245 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP N+ Y V + + K ++Y RI+ Sbjct: 246 IKKSLLIDIGTQWIKNYPTDPNIPEALYYVAKALDEN--------NNYKQAVRYYKRILL 297 Query: 168 RYTNSPYVKGARFYVTV 184 Y NS Y A+ ++ + Sbjct: 298 EYKNSRYAPLAQMHLAI 314 Score = 42.8 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 215 RTISRAFKNYPQTIFKKDLYLLEIIALGKLGIKKSLLIDIGTQWIKNYPTDPNIPEALYY 274 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 275 VAKALDENNNYKQAVRYYKRILLEYKNSRYAPLAQMHLA 313 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 16/47 (34%) Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + NY + EA+ + +A +A I Y +A Sbjct: 259 IKNYPTDPNIPEALYYVAKALDENNNYKQAVRYYKRILLEYKNSRYA 305 >gi|301757994|ref|XP_002914867.1| PREDICTED: prolyl 3-hydroxylase 2-like, partial [Ailuropoda melanoleuca] Length = 569 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 23/133 (17%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLL-------MSAFVQ 104 + + E Y V + +F A +YF Q R++ F+ ++L ++ Sbjct: 111 EAKPHLESYSAGVKHYEADDFELAIKYFEQALREY-FSEDTECRALCEGPQRFEEYEYLG 169 Query: 105 YSA--------GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 Y A G+Y +A + Y+ +P+ ++V L + Y + + D D A+ Sbjct: 170 YKAGLYEAIAVGEYVKALECAKAYLLLHPDDEDV-----LDNVDYYESLLDDSSDP-ASI 223 Query: 157 LMLQYMSRIVERY 169 + ++ V+R+ Sbjct: 224 EAREDLAMFVKRH 236 >gi|289548076|ref|YP_003473064.1| sporulation domain protein [Thermocrinis albus DSM 14484] gi|289181693|gb|ADC88937.1| Sporulation domain protein [Thermocrinis albus DSM 14484] Length = 353 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 92/254 (36%), Gaps = 48/254 (18%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + L + ++ C + R Y+ + L +N+S+A Sbjct: 1 MIRRWLLLSLIVSSCA------------QIQENKGAESARYYYDMGMSSLISRNYSEAIA 48 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + SR+ P+ + AG+Y++A S ++ KN +G Sbjct: 49 NLFRASRENPYDPKIWNA---LGIAYMEAGEYEKAESA---FVKALSVDKNFTDATLQLG 102 Query: 139 MSYA-------------QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + + + I D + Q+ Y++R+ + V R Y+ Sbjct: 103 ILHFRKGEYDKAKEYLLKAISDEGFPQKHM--AFYYLARVEKA------VGNERGYLENL 154 Query: 186 RNQLAAK------EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 R +A ++E+ + Y RGEY AA+ ++ + +N ++ + Y A Sbjct: 155 RKAVAYYPLFLEAQMELAQAYESRGEYDAALDVYRTLQSNGVNSPSVRLG---MARVYYA 211 Query: 240 LALMDEAREVVSLI 253 + ++A+ ++ + Sbjct: 212 MGDTEKAKGLLREL 225 >gi|288800008|ref|ZP_06405467.1| putative TPR-repeat-containing protein [Prevotella sp. oral taxon 299 str. F0039] gi|288333256|gb|EFC71735.1| putative TPR-repeat-containing protein [Prevotella sp. oral taxon 299 str. F0039] Length = 231 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 66/183 (36%), Gaps = 24/183 (13%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY--------EKAVLFLKEQNFSKAY 77 I + + + L S++ DS+ + Q +VY +KA ++ +N+ A Sbjct: 4 IIYFVLLLLLSTNAFSQSKEQLKDSLAVITTQLKVYPSSIYLLLKKAGYNMQLENWQNAI 63 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + ++ + P + +L A++ + + + E + YP + Sbjct: 64 DAYSDILKQQPRN---QTALYFRAYLYEKTSRLNLSRTDYETLLKVYPNHFEG-----RL 115 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP--YVKGARFYVTVGRNQLAAKEVE 195 G++ T + +++++E Y +S Y A F + +LA + Sbjct: 116 GLALLNNKTS------HTIEAMDILNQLIEAYPDSAITYAIRAGFEEEKHQYELAEYDFS 169 Query: 196 IGR 198 Sbjct: 170 QAE 172 >gi|310821739|ref|YP_003954097.1| hypothetical protein STAUR_4490 [Stigmatella aurantiaca DW4/3-1] gi|309394811|gb|ADO72270.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 351 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 43/131 (32%), Gaps = 8/131 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +E+ + + E + P A + + GK+ QA L + Sbjct: 190 FERGKAAFRRNDMKGTVEDLARFMAMNPSEADALDASFFLGAAYNNLGKHDQAVPLLARF 249 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + SK DY L+ SY + + T+ L + + Y + Y+ R Sbjct: 250 VDGDKRSKTRDYAMVLLAQSYQETNQ--------TEKALATVRDAIATYPATQYLGAMRA 301 Query: 181 YVTVGRNQLAA 191 + + QL Sbjct: 302 RLNSAKRQLGG 312 >gi|169633340|ref|YP_001707076.1| hypothetical protein ABSDF1691 [Acinetobacter baumannii SDF] gi|169795692|ref|YP_001713485.1| hypothetical protein ABAYE1588 [Acinetobacter baumannii AYE] gi|184158407|ref|YP_001846746.1| hypothetical protein ACICU_02087 [Acinetobacter baumannii ACICU] gi|213158363|ref|YP_002319661.1| hypothetical protein AB57_2309 [Acinetobacter baumannii AB0057] gi|215483178|ref|YP_002325385.1| hypothetical protein ABBFA_001482 [Acinetobacter baumannii AB307-0294] gi|301348116|ref|ZP_07228857.1| hypothetical protein AbauAB0_17761 [Acinetobacter baumannii AB056] gi|301512101|ref|ZP_07237338.1| hypothetical protein AbauAB05_10987 [Acinetobacter baumannii AB058] gi|301597368|ref|ZP_07242376.1| hypothetical protein AbauAB059_16161 [Acinetobacter baumannii AB059] gi|332852510|ref|ZP_08434249.1| hypothetical protein HMPREF0021_01824 [Acinetobacter baumannii 6013150] gi|332871286|ref|ZP_08439835.1| hypothetical protein HMPREF0020_03490 [Acinetobacter baumannii 6013113] gi|332873898|ref|ZP_08441838.1| hypothetical protein HMPREF0022_01450 [Acinetobacter baumannii 6014059] gi|169148619|emb|CAM86485.1| conserved hypothetical protein; putative exported protein [Acinetobacter baumannii AYE] gi|169152132|emb|CAP01031.1| conserved hypothetical protein; putative exported protein [Acinetobacter baumannii] gi|183210001|gb|ACC57399.1| uncharacterized protein conserved in bacteria [Acinetobacter baumannii ACICU] gi|213057523|gb|ACJ42425.1| hypothetical protein AB57_2309 [Acinetobacter baumannii AB0057] gi|213989047|gb|ACJ59346.1| hypothetical protein ABBFA_001482 [Acinetobacter baumannii AB307-0294] gi|322508731|gb|ADX04185.1| putative exported protein [Acinetobacter baumannii 1656-2] gi|323518336|gb|ADX92717.1| hypothetical protein ABTW07_2293 [Acinetobacter baumannii TCDC-AB0715] gi|332729212|gb|EGJ60555.1| hypothetical protein HMPREF0021_01824 [Acinetobacter baumannii 6013150] gi|332731570|gb|EGJ62856.1| hypothetical protein HMPREF0020_03490 [Acinetobacter baumannii 6013113] gi|332737884|gb|EGJ68771.1| hypothetical protein HMPREF0022_01450 [Acinetobacter baumannii 6014059] Length = 294 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 17/120 (14%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209 Q K + M ++ + NS Y A F++ ++L Y A Sbjct: 189 QGGAKKAIAPMQNFIKNHPNSIYTGNAYFWL--------------AEFHLATDPVNYNEA 234 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + +V Y ++ A A+ +L A A + + + +YP+ A++ Sbjct: 235 KKNYNVVANQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKNKLLSQYPKSEEAKFFNK 294 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 9/122 (7%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAA 114 ++ Y A+ K+ KA ++ P + + A + Y +A Sbjct: 176 EKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSIYTGNAYFWLAEFHLATDPVNYNEAK 235 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 QYP S Y + + +DV + T QY ++++ +Y S Sbjct: 236 KNYNVVANQYPNSSKAPRALYQL----YSIAKDVD---KNTVSANQYKNKLLSQYPKSEE 288 Query: 175 VK 176 K Sbjct: 289 AK 290 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 8/79 (10%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163 Y G ++A + + +I +P S G +Y + + D + + Sbjct: 187 YKQGGAKKAIAPMQNFIKNHPNSIYT-------GNAYFWLAEFHLATDPVNYNEAKKNYN 239 Query: 164 RIVERYTNSPYVKGARFYV 182 + +Y NS A + + Sbjct: 240 VVANQYPNSSKAPRALYQL 258 >gi|86359051|ref|YP_470943.1| hypothetical protein RHE_CH03460 [Rhizobium etli CFN 42] gi|86283153|gb|ABC92216.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 249 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 47/142 (33%), Gaps = 14/142 (9%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 + + + + + Y+ A + ++ A E FNQ +P + Sbjct: 101 ATIGSGPIPRANSGTPQQTASLGSEADQYKAAYGHVLSGDYGTAEEEFNQYIARYPSSAR 160 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP---ESKNVDYVYYLVGMSYAQMIRDVP 149 A + YS GKY +A + ++ + S+ + +GMS A + Sbjct: 161 AADANFWLGEALYSQGKYNEA---AKTFLNAHQKYGSSEKAPEMLLKLGMSLAALDNK-- 215 Query: 150 YDQRATKLMLQYMSRIVERYTN 171 + + + +RY Sbjct: 216 ------ETACATLREVSKRYPK 231 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + ++ + RY +S A F++ +G+Y A F Sbjct: 144 AEEEFNQYIARYPSSARAADANFWLGEAL--------------YSQGKYNEAAKTFLNAH 189 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y +E A E + +L + AL + A + + +RYP+ Sbjct: 190 QKYGSSEKAPEMLLKLGMSLAALDNKETACATLREVSKRYPKAS 233 >gi|51246265|ref|YP_066149.1| hypothetical protein DP2413 [Desulfotalea psychrophila LSv54] gi|50877302|emb|CAG37142.1| hypothetical protein DP2413 [Desulfotalea psychrophila LSv54] Length = 346 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 50/142 (35%), Gaps = 8/142 (5%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 S + + KA KE + AY F + S+ + + ++L M Sbjct: 211 TSQQKTVAPDKVIAPTGAILIAKANTIFKENRLADAYTMFEEISQSNYDSKITAEALYMM 270 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 ++ Y+ A ++ I QYP++ G S+A+ + + Sbjct: 271 GECRFYQKDYEDAVVRYQDLIRQYPDTPLSASSLLRQGNSFAKSLDK--------ETSKM 322 Query: 161 YMSRIVERYTNSPYVKGARFYV 182 +++E+Y +S A + Sbjct: 323 IYKKVIEKYPDSSQAIAATKEL 344 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 37/105 (35%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 I + +S A + + R +Y K +Y A+ R+Q + Sbjct: 245 DAYTMFEEISQSNYDSKITAEALYMMGECR------------FYQK--DYEDAVVRYQDL 290 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + Y D + ++ R ++ + ++ + + E+YP Sbjct: 291 IRQYPDTPLSASSLLRQGNSFAKSLDKETSKMIYKKVIEKYPDSS 335 >gi|113475440|ref|YP_721501.1| heat shock protein DnaJ-like [Trichodesmium erythraeum IMS101] gi|110166488|gb|ABG51028.1| heat shock protein DnaJ-like [Trichodesmium erythraeum IMS101] Length = 415 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 10/94 (10%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 +V +E+Y++ V + N+ A + + P L AF Y Y+ Sbjct: 70 NVEEAQELYKRGVSKSQRGNYQGAILDYTKALEINP--DWLE-VLYNRAFASYKLQDYRN 126 Query: 113 AASLGEE--YITQYPESKNVDYVYYLVGMSYAQM 144 A + ++ + VYY G+ ++ Sbjct: 127 ADIDYTKALFL-----DPYLVEVYYYRGLCRMKL 155 >gi|297182009|gb|ADI18184.1| uncharacterized protein conserved in bacteria [uncultured delta proteobacterium HF0200_39N20] Length = 258 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 35/75 (46%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +G +L+RG + + ++L Y+ H A+ L +A LA ++ + + + + Sbjct: 174 MSLGNGFLERGHATQSAYYYGIILREYTGTSHVPNALYYLGKAMEELAETEKQKVLWNEL 233 Query: 254 QERYPQGYWARYVET 268 + +P A+ + Sbjct: 234 IKNHPNSPLAKRAKK 248 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 42/119 (35%), Gaps = 8/119 (6%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ L+ N +A Y + + L+ G Q+A + + Sbjct: 140 GLISLQAGNPDQALVYLQDILIQIDKTPLKAQILMSLGNGFLERGHATQSAYYYGIILRE 199 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 Y + +V Y +G + ++ T+ + +++ + NSP K A+ + Sbjct: 200 YTGTSHVPNALYYLGKAMEELAE--------TEKQKVLWNELIKNHPNSPLAKRAKKRL 250 >gi|237809440|ref|YP_002893880.1| tol-pal system protein YbgF [Tolumonas auensis DSM 9187] gi|237501701|gb|ACQ94294.1| tol-pal system protein YbgF [Tolumonas auensis DSM 9187] Length = 262 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 43/128 (33%), Gaps = 22/128 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y +A + +I YP S +Y +G + +Q + + + Sbjct: 155 KEKNYAKAIPAFDTFIASYPNSALQPGAHYWLG--------QLQLNQGDREQAKAHFLTV 206 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 ++Y +SP A + + V KE A FQLV+ Y + Sbjct: 207 AQKYKDSPKRPEAIYKLGVIAKADGDKE--------------KANKFFQLVIKQYPNTSA 252 Query: 226 AEEAMARL 233 A+ A + Sbjct: 253 AQLAQKAM 260 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 53/126 (42%), Gaps = 15/126 (11%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 YE AV +KE+N++KA F+ +P + + + +Q + G +QA + Sbjct: 146 YESAVNLVIKEKNYAKAIPAFDTFIASYPNSALQPGAHYWLGQLQLNQGDREQAKA---H 202 Query: 120 YI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 ++ +Y +S Y +G+ + + ++ ++++Y N+ + Sbjct: 203 FLTVAQKYKDSPKRPEAIYKLGV--------IAKADGDKEKANKFFQLVIKQYPNTSAAQ 254 Query: 177 GARFYV 182 A+ + Sbjct: 255 LAQKAM 260 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + Y NS GA +++ + L +G+ A F V Sbjct: 161 KAIPAFDTFIASYPNSALQPGAHYWLGQLQ--------------LNQGDREQAKAHFLTV 206 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y D+ EA+ +L A ++A + L+ ++YP Sbjct: 207 AQKYKDSPKRPEAIYKLGVIAKADGDKEKANKFFQLVIKQYPNTS 251 >gi|254417224|ref|ZP_05030969.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196176030|gb|EDX71049.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 600 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 73/226 (32%), Gaps = 41/226 (18%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + KF+ I ++ +V + Q + + V + + A + ++ ++ A Sbjct: 1 MIKFSDRIPAALIGTAIVLVQPQFAVALTNLVVAQQPTVQNLINSARIKAEKGDYQGAIA 60 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYL 136 +NQ + + + + A Y YQ A + + I P DY YY Sbjct: 61 DYNQALQL---SPNNAEVYYLRANAYYQLENYQGAIADFNQAIKINP-----DYAIAYYN 112 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 G++ + + + + ++ ++ + A + R+ L E I Sbjct: 113 RGLARSNL--------GDYQGAIADYTQAIQLNPDD---AIAYNNRGLARSNLGDYEEAI 161 Query: 197 GRY-------------YLKR-------GEYVAAIPRFQLVLANYSD 222 + Y R G+Y AI + + D Sbjct: 162 ADFAQAIQLNPDDATAYYNRGLARSDLGDYQGAIADYTQAIKINPD 207 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 40/126 (31%), Gaps = 28/126 (22%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS------ 106 + Y Y + + A FNQ + P A+ Y+ Sbjct: 307 NPDYANAYYNRGNARSDLGDDQGAIADFNQAIQLNP----------DFAYAYYNRGNARS 356 Query: 107 -AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 G Y++A + + I P+ YY G++ + + D + + ++ Sbjct: 357 NLGDYEEAIADFAQAIQLNPDD---ATAYYNRGLARSDLGDD--------QGAIADYNQA 405 Query: 166 VERYTN 171 ++ + Sbjct: 406 IQINPD 411 >gi|189183560|ref|YP_001937345.1| TPR repeat-containing protein 05 [Orientia tsutsugamushi str. Ikeda] gi|189180331|dbj|BAG40111.1| TPR repeat-containing protein 05 [Orientia tsutsugamushi str. Ikeda] Length = 263 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 38/124 (30%), Gaps = 28/124 (22%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAG 108 + Y K K + +A E F+ + P A Y +G Sbjct: 143 HADAYYNKGNCLAKLGQYQEAIENFDLAIKYNP----------NHADAYYNKGVCLCKSG 192 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 ++Q+A + I P Y YY G A++ + ++ ++ Sbjct: 193 QFQEAIENYDLAIKYNPNH---AYAYYNKGNCLAKL--------GQYQKAIENFDLAIKY 241 Query: 169 YTNS 172 N+ Sbjct: 242 DPNN 245 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 52/164 (31%), Gaps = 32/164 (19%) Query: 71 QNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + + +A + +N A + + F +YQ+A + I P + Sbjct: 90 ERYKEAIKNYNLAIKYKHNLAE----AYVNKGFCLGKLRQYQEAIENYDLAIKYNPNHAD 145 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG---- 185 YY G A++ + ++ ++ N A + V Sbjct: 146 ---AYYNKGNCLAKL--------GQYQEAIENFDLAIKYNPNH---ADAYYNKGVCLCKS 191 Query: 186 ---RNQLAAKEVEI------GRYYLKRGEYVAAIPRFQLVLANY 220 + + ++ I Y +G +A + ++Q + N+ Sbjct: 192 GQFQEAIENYDLAIKYNPNHAYAYYNKGNCLAKLGQYQKAIENF 235 >gi|325927916|ref|ZP_08189140.1| tetratricopeptide repeat protein,von Willebrand factor type A-like protein [Xanthomonas perforans 91-118] gi|325541756|gb|EGD13274.1| tetratricopeptide repeat protein,von Willebrand factor type A-like protein [Xanthomonas perforans 91-118] Length = 605 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 38/111 (34%), Gaps = 9/111 (8%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 ++ + VC L + + D L D Q+ + + V ++ +F+ A + Sbjct: 324 FRRRAVVAVLAMVCVLPLAQPAHAADGTLWQRADQVQQQRL-DAGVQAYRKGDFAAAQKA 382 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 F + L G+Y A + + + Q+P ++ Sbjct: 383 FEAVP--------TDEGLYNLGNALARQGQYDAAIAAYDRALKQHPNQQDA 425 >gi|148258084|ref|YP_001242669.1| hypothetical protein BBta_6876 [Bradyrhizobium sp. BTAi1] gi|146410257|gb|ABQ38763.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 348 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 33/133 (24%), Gaps = 22/133 (16%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 Y A + +YP + Y +G S+ Q + + Sbjct: 227 EYDLGIGYMQRRDYALAEQTMRNFTQKYPNDPMIGDAKYWLGESFYQR--------QQYR 278 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + ++ S A + L KE AA F + Sbjct: 279 DAAEVFLAVTTKHDKSSKAPDALLRLGQSLAALKEKE--------------AACAAFGEI 324 Query: 217 LANYSDAEHAEEA 229 Y A +A Sbjct: 325 SRKYPRASAGVKA 337 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 22/127 (17%) Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 Y +G+ Y Q R L Q M ++Y N P + A++++ Sbjct: 228 YDLGIGYMQR--------RDYALAEQTMRNFTQKYPNDPMIGDAKYWL------------ 267 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 G + +R +Y A F V + + A +A+ RL ++ AL + A I Sbjct: 268 --GESFYQRQQYRDAAEVFLAVTTKHDKSSKAPDALLRLGQSLAALKEKEAACAAFGEIS 325 Query: 255 ERYPQGY 261 +YP+ Sbjct: 326 RKYPRAS 332 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 45/126 (35%), Gaps = 14/126 (11%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 LD+ + R+ Y+ + +++ ++++ A + ++ +P + + Y Sbjct: 215 LDTAPPTQTPRDEYDLGIGYMQRRDYALAEQTMRNFTQKYPNDPMIGDAKYWLGESFYQR 274 Query: 108 GKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 +Y+ A E ++ + +S +G S A + + + Sbjct: 275 QQYRDA---AEVFLAVTTKHDKSSKAPDALLRLGQSLAAL--------KEKEAACAAFGE 323 Query: 165 IVERYT 170 I +Y Sbjct: 324 ISRKYP 329 >gi|254426965|ref|ZP_05040672.1| tol-pal system protein YbgF, putative [Alcanivorax sp. DG881] gi|196193134|gb|EDX88093.1| tol-pal system protein YbgF, putative [Alcanivorax sp. DG881] Length = 254 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 40/143 (27%), Gaps = 24/143 (16%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY------- 105 D R Y A L +F A F +FP + A + Sbjct: 126 DPEADRAAYNAAKDKLVSGDFKGAIAGFEAYLGEFPQG-------MSRANAHFWAGKLYS 178 Query: 106 --SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 ++A + YP+ Y++ + A+ + Sbjct: 179 DQKEPDLKKAEGHFQAVADDYPDHSKAPKSLYILAVMQAKA--------GEVSPAKVNLH 230 Query: 164 RIVERYTNSPYVKGARFYVTVGR 186 +++++Y +S A+ + Sbjct: 231 KLIKQYPDSSEAGQAKSLLDQLN 253 Score = 35.9 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 26/62 (41%) Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 A FQ V +Y D A +++ L + A+ + + ++YP A ++ Sbjct: 188 AEGHFQAVADDYPDHSKAPKSLYILAVMQAKAGEVSPAKVNLHKLIKQYPDSSEAGQAKS 247 Query: 269 LV 270 L+ Sbjct: 248 LL 249 >gi|183219913|ref|YP_001837909.1| hypothetical protein LEPBI_I0495 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910037|ref|YP_001961592.1| hypothetical protein LBF_0475 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774713|gb|ABZ93014.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778335|gb|ABZ96633.1| Hypothetical protein; putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 798 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 15/137 (10%), Positives = 45/137 (32%), Gaps = 19/137 (13%) Query: 45 DVYLDSVTDVRYQREVYE---KAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMS 100 + + + Y+ + + ++ ++ A + P + Sbjct: 629 EEVAHAAKESTKNNTYYKMLGEGIQSYRDGEWNHAIYALEIALESE-PDDLYCLR---EL 684 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKN----VDYVY-----YLVGMSYAQMIRDVPYD 151 + + + Y++A L Y+ P + + Y + +++ YA+ +R D Sbjct: 685 SKLYMKSKDYEKAIGLANRYLQLNPGDTDFLFYIAYAHKQKRDFVLATDYAERLRY--RD 742 Query: 152 QRATKLMLQYMSRIVER 168 + +L ++ R Sbjct: 743 PKNFNNLLLLAEILMHR 759 >gi|68468624|ref|XP_721631.1| potential calcineurin-like Serine/Threonine phosphatase [Candida albicans SC5314] gi|46443554|gb|EAL02835.1| potential calcineurin-like Serine/Threonine phosphatase [Candida albicans SC5314] Length = 614 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 47/153 (30%), Gaps = 37/153 (24%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119 +K LK+ + +A E + + P + ++ + Y A + Sbjct: 62 DKGNNLLKQHKYDEAIEAYTKAIEIDPNNAIFYSNRAQVQI-----KLENYGLAIQDCDL 116 Query: 120 YITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 I ++++ YY G+S ++ K L+ I+++ N Sbjct: 117 VIKL-----DINFLKAYYRKGVSLMAILNH--------KQALENFKFILKKLPNDKLTLE 163 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 N YLKR + AI Sbjct: 164 NYK---QCTN------------YLKRQAFEKAI 181 >gi|308185022|ref|YP_003929155.1| paralysed flagella protein [Helicobacter pylori SJM180] gi|308060942|gb|ADO02838.1| paralysed flagella protein [Helicobacter pylori SJM180] Length = 801 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 186 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGKLG 245 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP N+ Y V + + K ++Y RI+ Sbjct: 246 IKKSLLIDIGTQWIKNYPTDPNIPEALYYVAKALDEN--------NNYKQAVRYYKRILL 297 Query: 168 RYTNSPYVKGARFYVTV 184 Y NS Y A+ + + Sbjct: 298 EYKNSRYAPLAQMRLAI 314 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 215 RTISRAFKNYPQTIFKKDLYLLEIIALGKLGIKKSLLIDIGTQWIKNYPTDPNIPEALYY 274 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 275 VAKALDENNNYKQAVRYYKRILLEYKNSRYAPLAQMRLA 313 Score = 36.6 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 16/47 (34%) Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + NY + EA+ + +A +A I Y +A Sbjct: 259 IKNYPTDPNIPEALYYVAKALDENNNYKQAVRYYKRILLEYKNSRYA 305 >gi|254779817|ref|YP_003057923.1| putative paralysed flagella protein PflA; putative signal peptide [Helicobacter pylori B38] gi|254001729|emb|CAX29960.1| Putative paralysed flagella protein PflA; putative signal peptide [Helicobacter pylori B38] Length = 801 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 50/137 (36%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 186 PLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRTFKNYPQTMFKKDLYLLEIIALGQLG 245 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP N+ V Y V + + K ++Y RI+ Sbjct: 246 IKKSLLIDIGTKWIKNYPTDPNIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 297 Query: 168 RYTNSPYVKGARFYVTV 184 Y NS Y A+ + + Sbjct: 298 EYKNSRYAPLAQMRLAI 314 Score = 43.2 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 12/99 (12%), Positives = 30/99 (30%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + R + ++ + L I + + TD +Y Sbjct: 215 RTISRTFKNYPQTMFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPNIPEVLYY 274 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 275 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 313 >gi|78222589|ref|YP_384336.1| lytic transglycosylase, catalytic [Geobacter metallireducens GS-15] gi|78193844|gb|ABB31611.1| Lytic transglycosylase, catalytic [Geobacter metallireducens GS-15] Length = 719 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 21/190 (11%), Positives = 58/190 (30%), Gaps = 38/190 (20%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ +A + +A E + + P + + R++ ++ A + ++ G ++A ++ Sbjct: 96 LFWEADALYRIARHDEALETVKRLLHERPESPLVRRARMLQADILFARGDLKEAQAVYIR 155 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 ++ YP ++ Y + +Q + + Y SP + A Sbjct: 156 FVESYPSGRDSLTAIYQAARCREGLGDKA--------KAVQELRNLWLAYPASPVAEDAE 207 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + Q + A + + + R + Sbjct: 208 EALRQLERQ------------------------------GFPAAPYTPDELFRRASTLYS 237 Query: 240 LALMDEAREV 249 L +A + Sbjct: 238 LGRFQQAVKT 247 >gi|311694924|gb|ADP97797.1| secreted protein containing Tol-Pal system, YbgF domain [marine bacterium HP15] Length = 248 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 22/124 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + KY A S E+I +YPE YY +G Y + + Q + + Sbjct: 138 NQKKYDDAISRIYEFIDEYPEGDLTVNAYYWLGEVYLVKPQ--------LEQAKQAFTIV 189 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 R+ + A + + V ++L KE A Q V+ +Y + Sbjct: 190 ATRFADHRKAPDAVYKLGVTHDRLGEKE--------------QARRSMQTVIDDYPSSSA 235 Query: 226 AEEA 229 A+ A Sbjct: 236 ADLA 239 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 49/130 (37%), Gaps = 14/130 (10%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + I+D+ +Q+ + + ++ Y A +++ G YL Sbjct: 129 YEQIQDLIRNQKKYDDAISRIYEFIDEYPEGDLTVNAYYWL--------------GEVYL 174 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A F +V ++D A +A+ +L + L ++AR + + + YP Sbjct: 175 VKPQLEQAKQAFTIVATRFADHRKAPDAVYKLGVTHDRLGEKEQARRSMQTVIDDYPSSS 234 Query: 262 WARYVETLVK 271 A ++ Sbjct: 235 AADLARKFLE 244 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 14/137 (10%), Positives = 44/137 (32%), Gaps = 18/137 (13%) Query: 56 YQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 +R+ YE+ + ++ + A + ++P + + V + +QA Sbjct: 124 EERKAYEQIQDLIRNQKKYDDAISRIYEFIDEYPEGDLTVNAYYWLGEVYLVKPQLEQAK 183 Query: 115 SL----GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + + + Y +G+++ ++ + + M +++ Y Sbjct: 184 QAFTIVATRFA----DHRKAPDAVYKLGVTHDRL--------GEKEQARRSMQTVIDDYP 231 Query: 171 NSPYVKGARFYVTVGRN 187 +S +N Sbjct: 232 SSS-AADLARKFLESQN 247 >gi|325475688|gb|EGC78864.1| TPR domain-containing protein [Treponema denticola F0402] Length = 992 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 24/207 (11%), Positives = 63/207 (30%), Gaps = 44/207 (21%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF---- 102 D + + +Y + + ++ A + F P + A+ Sbjct: 101 EKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVLDIKP-----DDA---LAYNHLG 152 Query: 103 -VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 V + Y +A + + P + + ++ +++ K + Sbjct: 153 SVYFLCKDYPKALETYKIGLKVDPNHPFL----------NFNLA-ELYKEEKHYKEAINS 201 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 ++ N LA I Y++ E+ AI +++++ + Sbjct: 202 YQTAMKTKPN-------------WYEALA----AIADCYVEMEEFGKAIETYKMIIGS-- 242 Query: 222 DAEHAEEAMARLVEAYVALALMDEARE 248 +EE +L + Y + +A + Sbjct: 243 -TGQSEENFTKLAKLYEKIHEDKDAED 268 >gi|222086971|ref|YP_002545505.1| tol-pal system protein YbgF [Agrobacterium radiobacter K84] gi|221724419|gb|ACM27575.1| tol-pal system protein YbgF [Agrobacterium radiobacter K84] Length = 356 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 Q + ++ Y +S A F++ +G+Y A F Sbjct: 251 AEQEFRQYIDSYPSSSRSADANFWLGEAL--------------YSQGKYNDAAKTFLNAH 296 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 YS +E A E + +L + AL D A + + +RYP+ Sbjct: 297 QKYSTSEKAPEMLLKLGMSLAALDNKDTACATLREVTKRYPKAS 340 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 46/119 (38%), Gaps = 14/119 (11%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + + Y+ A + ++S A + F Q +P + + + YS GKY A Sbjct: 231 SENDEYKAAYGHVLSGDYSVAEQEFRQYIDSYPSSSRSADANFWLGEALYSQGKYNDA-- 288 Query: 116 LGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + ++ +Y S+ + +GMS A + D + T + + +RY Sbjct: 289 -AKTFLNAHQKYSTSEKAPEMLLKLGMSLAAL------DNKDT--ACATLREVTKRYPK 338 Score = 35.5 bits (81), Expect = 8.5, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 25/86 (29%), Gaps = 8/86 (9%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 +A+ +G Y A +YI YP S + +G + Q Sbjct: 235 EYKAAYGHVLSGDYSVAEQEFRQYIDSYPSSSRSADANFWLGEALYS--------QGKYN 286 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYV 182 + ++Y+ S + Sbjct: 287 DAAKTFLNAHQKYSTSEKAPEMLLKL 312 >gi|119510603|ref|ZP_01629733.1| hypothetical protein N9414_18328 [Nodularia spumigena CCY9414] gi|119464764|gb|EAW45671.1| hypothetical protein N9414_18328 [Nodularia spumigena CCY9414] Length = 716 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 16/123 (13%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + ++ + + A F++ P + K + G+ +A + ++ + Sbjct: 595 NRGLALIELERYEDAIASFDKAIDINPNSA---KVWDKRGYALVRLGEDDEAIASFDKAL 651 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P N YY YA QR KL L + + +E Y + A F Sbjct: 652 EINP---NYASAYYDKAACYAL--------QRQLKLALANLQQAIELNP--RYQEDAAFD 698 Query: 182 VTV 184 + Sbjct: 699 IDF 701 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 77/231 (33%), Gaps = 46/231 (19%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-RKSLLM 99 + S + ++V + ++ ++ + +A +++ D P VA K L Sbjct: 473 EKSEIQEVQPQSEVLVNDAL-QEGDELFAQRKYDEAIALYDKVVADDPDNHVAWLKHGLT 531 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKL 157 +Y+ A + E+ I P DY + G+++ ++ + + Sbjct: 532 LG----RLQRYKDAIASYEKAIEIKP-----DYHEAWCDRGVAFGKLGQQ--------QK 574 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + + + P V LA E+ Y AI F + Sbjct: 575 AFDSFDKATQVKPDDP--------VAWLNRGLALIEL---------ERYEDAIASFDKAI 617 Query: 218 ANYSDAEHAEE----AMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 ++ + A+ RL E A+A D+A E I Y Y+ + Sbjct: 618 DINPNSAKVWDKRGYALVRLGEDDEAIASFDKALE----INPNYASAYYDK 664 >gi|147921707|ref|YP_684473.1| thioredoxin-like protein [uncultured methanogenic archaeon RC-I] gi|110619869|emb|CAJ35147.1| thioredoxin-like protein [uncultured methanogenic archaeon RC-I] Length = 195 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 1/69 (1%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMDEAREVVSLIQERYPQ 259 ++ +Y AI F+ + Y + E A EA A Y + + +YP+ Sbjct: 123 MRNEDYDKAISCFETIDKKYPETEAAPEAAYYTGVAQYKKTNDAKMLKNAHIYLSRKYPE 182 Query: 260 GYWARYVET 268 WA+ Sbjct: 183 SDWAKKAFA 191 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 29/81 (35%), Gaps = 1/81 (1%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + + + + ++ +++ KA F + +P A ++ + QY Sbjct: 106 PPKDFRAQLILGEGKVSMRNEDYDKAISCFETIDKKYPETEAAPEAAYYTGVAQYKKTND 165 Query: 111 QQAASLGEEYI-TQYPESKNV 130 + Y+ +YPES Sbjct: 166 AKMLKNAHIYLSRKYPESDWA 186 Score = 38.9 bits (90), Expect = 0.68, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 7/73 (9%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y +A S E +YPE++ Y G++ + D + K Y+SR Sbjct: 124 RNEDYDKAISCFETIDKKYPETEAAPEAAYYTGVAQYKKTN----DAKMLKNAHIYLSR- 178 Query: 166 VERYTNSPYVKGA 178 +Y S + K A Sbjct: 179 --KYPESDWAKKA 189 >gi|153876671|ref|ZP_02003871.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS] gi|152066865|gb|EDN66129.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS] Length = 257 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 27/70 (38%), Gaps = 4/70 (5%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y++ V KE + A E F+ P + + G Y++A + E+ Sbjct: 51 YKRGVALYKEGQYIAAAEAFSNV--THP--DATLNAQYNLGNAYFQQGDYEKAINTYEQV 106 Query: 121 ITQYPESKNV 130 + + P ++ Sbjct: 107 LAEQPNHEDA 116 >gi|326336387|ref|ZP_08202558.1| TPR-domain containing protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691561|gb|EGD33529.1| TPR-domain containing protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 995 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 37/237 (15%), Positives = 69/237 (29%), Gaps = 70/237 (29%) Query: 54 VRYQREVYEK-----AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQ 104 ++Y+K A+ + N+ +A YF + + + Sbjct: 415 TSADEKIYQKVAFFYALQLYADGNYKEALSYFQKAQ-----GKSNELLRARAIYWSGETH 469 Query: 105 YSAGKYQQAASLGEEYITQ-------YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 Y +Y +A ++++ YP YY +G + Q+ Sbjct: 470 YQLQQYAEAQKDFHDFLSLGLKSAPEYPN------AYYGLGYALFN--------QKKYLE 515 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV---------- 207 + S+ +E + + A LA IG+Y+ Y Sbjct: 516 ATENFSKYIETKPTASRLADAHLR-------LADSYFAIGKYWPAMENYNKVMTINVGDT 568 Query: 208 --AA----------------IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 AA I + NY + E+A+ L YVA ++A Sbjct: 569 DYAAFQKAISYGIVDRVPKKIEELNAFIKNYPKSNLREDAIYELANTYVAQGNNEKA 625 Score = 42.8 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 25/183 (13%), Positives = 50/183 (27%), Gaps = 26/183 (14%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + + + KA Y L + Y YQ+A I Sbjct: 251 GESYFNLKQYDKAIPYLEAYRGKK--GKYTNTDLYYLGYAYYKQKDYQKAIGQFNRIIDG 308 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 +++ YY + Y + + L + +V + Sbjct: 309 --KNEVAQNAYYHLAECYLNTNQK--------QQALNAFRNASQM----NFVPEIKKDAH 354 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 + +L+ Y Y + Q + Y + +H +E LV++Y+ Sbjct: 355 LNYARLS---------YEVGNAYESTPEVIQSYMETYPN-DHTQELKELLVDSYITSGNF 404 Query: 244 DEA 246 A Sbjct: 405 QSA 407 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 32/261 (12%), Positives = 73/261 (27%), Gaps = 65/261 (24%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD-------FPFAGVARKSLLMSAFVQY 105 ++ R +Y + Q +++A + F+ +P A + + Sbjct: 455 ELLRARAIYWSGETHYQLQQYAEAQKDFHDFLSLGLKSAPEYPNAYYG------LGYALF 508 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA---------------QMIRDVPY 150 + KY +A +YI P + + + + SY I Sbjct: 509 NQKKYLEATENFSKYIETKPTASRLADAHLRLADSYFAIGKYWPAMENYNKVMTINVGDT 568 Query: 151 DQRATKLMLQY------------MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 D A + + Y ++ ++ Y S + A + + E Sbjct: 569 DYAAFQKAISYGIVDRVPKKIEELNAFIKNYPKSNLREDAIYELANTYVAQGNNEKAAAL 628 Query: 199 ------------------------YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 Y K A+ F+ + Y ++ A +A+ Sbjct: 629 YQQLQNQYQGGTYTARAMLREGLMLYNKNENQK-ALTVFRKITEKYPNSPEAMQAINTAK 687 Query: 235 EAYVALALMDEAREVVSLIQE 255 YV + +++ + + Sbjct: 688 SIYVEMGKVEQYAQWAKSLGY 708 >gi|78049049|ref|YP_365224.1| hypothetical protein XCV3493 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037479|emb|CAJ25224.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 605 Score = 47.0 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 38/111 (34%), Gaps = 9/111 (8%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 ++ + VC L + + D L D Q+ + + V ++ +F+ A + Sbjct: 324 FRRRAVVAVLAMVCVLPLAQPAHAADGTLWQRADQVQQQRL-DAGVQAYRKGDFAAAQKA 382 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 F + L G+Y A + + + Q+P ++ Sbjct: 383 FEAVP--------TDEGLYNLGNALARQGQYDAAIAAYDRALKQHPNQQDA 425 >gi|42524768|ref|NP_970148.1| hypothetical protein Bd3409 [Bdellovibrio bacteriovorus HD100] gi|39576978|emb|CAE78207.1| hypothetical protein Bd3409 [Bdellovibrio bacteriovorus HD100] Length = 940 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 51/132 (38%), Gaps = 12/132 (9%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-RKSLLMSAFVQYSAGKYQQAASL 116 Y + ++++ +N++KA + + + + +P + + A + KY Q+ Sbjct: 432 EAAYRRGDVWVRGKNYAKAVDEYQKALKKYPEGQSSYPNAFFNQAESLFMMNKYPQSLDT 491 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML--QYMSRIVERYTNSPY 174 E++ ++P S + + +G +++ D+ Y RY +P Sbjct: 492 YREFVKKFPSSNHSAFAMTRMG----ELLEIFGADKSRVMGAYLETYF-----RYGETPN 542 Query: 175 VKGARFYVTVGR 186 AR + R Sbjct: 543 AVIARLRLLSTR 554 Score = 42.8 bits (100), Expect = 0.058, Method: Composition-based stats. Identities = 21/201 (10%), Positives = 69/201 (34%), Gaps = 27/201 (13%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI--TQYPESK 128 +++ +A + + + +P + +A ++ + + F+ G + L +E+I + + Sbjct: 330 KDYDEAMQKYKEAVAKYPRSPLAERTSVKTGFLALEKGDALNSLRLFQEHIDNKNFSGKE 389 Query: 129 NV--DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 +V D +G+++ ++ + + ++ + V Sbjct: 390 SVSKDLARLGMGLAFMKLNKWTD--------AIAQFDQVEKE------AFNRDLKVEAAY 435 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEAMARLVEAYVALALMDE 245 + G +++ Y A+ +Q L Y A E+ + + Sbjct: 436 RR--------GDVWVRGKNYAKAVDEYQKALKKYPEGQSSYPNAFFNQAESLFMMNKYPQ 487 Query: 246 AREVVSLIQERYPQGYWARYV 266 + + +++P + + Sbjct: 488 SLDTYREFVKKFPSSNHSAFA 508 >gi|242040831|ref|XP_002467810.1| hypothetical protein SORBIDRAFT_01g034480 [Sorghum bicolor] gi|241921664|gb|EER94808.1| hypothetical protein SORBIDRAFT_01g034480 [Sorghum bicolor] Length = 630 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 46/152 (30%), Gaps = 27/152 (17%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF----P--------FAGVARKSL-LMSA 101 ++ KE F A +++ R++ P FA +R SL L A Sbjct: 402 DEADKIKNTGNRLFKEGKFELAKAKYDKVLREYNHVHPHDDDEGKIFAN-SRSSLHLNVA 460 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F G+Y+++ + + P Y G S+ + Sbjct: 461 FCYQKMGEYRKSIETCNKVLDANPVHVK---ALYRRGTSFMLL--------GEFDDARND 509 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 +I+ +S A + + + E Sbjct: 510 FEKIITVDKSSE--PDATAALLKLKQKEQEAE 539 >gi|193216010|ref|YP_001997209.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193089487|gb|ACF14762.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC 35110] Length = 595 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 69/200 (34%), Gaps = 28/200 (14%) Query: 64 AVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 V +L + +++A + + +S+ ++Q A + E+ ++ Sbjct: 320 GVCYLNLERYNEAISVLKLAID----YDPSKPQIYSNLGTAYFSSDRFQDAIAAFEKAVS 375 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVP-----------YDQRATKLMLQYMSRIVERYTN 171 + + Y YY +G+SY + + K + ER+ Sbjct: 376 L---NDKLAYPYYGIGISYYSLESKMNMLSSLNASIYVRSGSLGKNANAAKN---ERF-- 427 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 + + R LA+ +G YL+ G + AI F + + +A A Sbjct: 428 -QNIIEPLEHAVKLRPDLASAHFGLGMAYLETGLFGKAIEAFNQAVRFNPE---FAQAFA 483 Query: 232 RLVEAYVALALMDEAREVVS 251 L Y+ L EA++ + Sbjct: 484 GLGSVYMKLGYKGEAKKALE 503 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 97/344 (28%), Gaps = 98/344 (28%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 M + + +KF L + + +S+ S + + Sbjct: 1 MQTTSKTTEANLVFYLNKPHKFLLFKGLPVFFLIGICLFSKSAFSTPPPSDFRATLPQAL 60 Query: 61 YEKAVL---------FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + A +LK +N ++ F + + K+ + + G Q Sbjct: 61 DDSAKAVHNCELGYKYLKAKNTQQSLLAFQAATSA---SPSCSKAFVGLGDAYVAQGNDQ 117 Query: 112 QAASLGEEYITQYPESKNV------DYV---YYLVGMSYAQMIRDVPYDQRAT------- 155 +A + E+ I PE+ N Y+ Y YA+ D + Sbjct: 118 KAIAAYEQAIRLNPENVNAYDGLSLVYMKTWQYEKAALYAEKAIQYQPDLTSAQIRLSMA 177 Query: 156 -------KLMLQY-------MSRIVERYTNSPYVKGA---------------RFYVT--- 183 + Q + + + +S + A Y+ Sbjct: 178 QFQLRQFQEAFQSMNIAQNLLKETLRHHPDSTDARKALGMAYLISGDWNSALSQYIVLKD 237 Query: 184 -----------VGRNQLAAKEVE---------------IGRY---------YLKRGEYVA 208 +Q A +E++ GR+ YL++ EY Sbjct: 238 QDSVLAAELYQEILSQKAEQELQLEFFESMLHKRDVKKAGRFEANFQLGSAYLRKQEYEK 297 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 AI ++ L + +A+ L Y+ L +EA V+ L Sbjct: 298 AIEFYKAALEIKPNT---VDALNALGVCYLNLERYNEAISVLKL 338 >gi|148910632|gb|ABR18386.1| unknown [Picea sitchensis] Length = 486 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 43/142 (30%), Gaps = 31/142 (21%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL--MSAFVQYSA 107 +D+ E+ A + FS+A E + + ++ ++ AF Sbjct: 9 TSDIERAEEIKAIANAAFQAHKFSRAIELYSQAIELN------SQNAVYWANRAFAHTKL 62 Query: 108 GKYQQAASLGEEYITQYPESKNVD--Y--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 +Y A + +D Y YY G +Y M K L+ Sbjct: 63 EEYGSAIQDAT-------TAVEIDAKYTKGYYRRGAAYLAM--------GKFKEALKDFQ 107 Query: 164 RIVERYTNSPYVKGARFYVTVG 185 ++ + N P A + Sbjct: 108 QVKKICPNDP---DATKKLKEC 126 >gi|157374998|ref|YP_001473598.1| TPR repeat-containing protein [Shewanella sediminis HAW-EB3] gi|157317372|gb|ABV36470.1| tetratricopeptide TPR_2 repeat protein [Shewanella sediminis HAW-EB3] Length = 242 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 43/116 (37%), Gaps = 14/116 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 QR + S +++Y NS Y A +++ +GE+V A Sbjct: 135 QRKYDEAIPAFSDFIKQYPNSTYAANANYWLGQLL--------------YNKGEFVTAKK 180 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 F+ V+ +S++ +++ +L + A+ + + Y AR + Sbjct: 181 AFETVVNQFSESNKRGDSLVKLGMIAEKTGNISSAKVYYQKVVKEYANSAAARIAK 236 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 39/124 (31%), Gaps = 22/124 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 KY +A ++I QYP S Y +G V + + Sbjct: 134 KQRKYDEAIPAFSDFIKQYPNSTYAANANYWLGQLLYNKGEFVT--------AKKAFETV 185 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V +++ S + + + K G +A +Q V+ Y+++ Sbjct: 186 VNQFSESNKRGDSLVKLGMIAE--------------KTGNISSAKVYYQKVVKEYANSAA 231 Query: 226 AEEA 229 A A Sbjct: 232 ARIA 235 Score = 38.6 bits (89), Expect = 0.88, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 1/78 (1%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 +S S + + YE AV LK++ + +A F+ + +P + A + Sbjct: 106 TSSSEVNPSASSTLGETASYEHAVNLVLKQRKYDEAIPAFSDFIKQYPNSTYAANANYWL 165 Query: 101 AFVQYSAGKYQQAASLGE 118 + Y+ G++ A E Sbjct: 166 GQLLYNKGEFVTAKKAFE 183 >gi|320538333|ref|ZP_08038214.1| tetratricopeptide repeat protein [Treponema phagedenis F0421] gi|320144832|gb|EFW36567.1| tetratricopeptide repeat protein [Treponema phagedenis F0421] Length = 318 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 75/227 (33%), Gaps = 45/227 (19%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 + VC L S+D + ++S A F + + Sbjct: 5 LLLCVCILFSSAFSFSQDYL--------------TAGLDAYARSDWSSAIFSFQKAMK-- 48 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 P + ++ SA YQ A + E++I P S+ + V Y G Sbjct: 49 PQSAQYNEAWYWLIMAHASAHNYQIALTQAEKFIQANPRSQRMPEVVYQRG--------R 100 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 + A + + + ++R+TN V A ++ IG G + Sbjct: 101 IFCLCGAHENSINELYAFIKRWTNHSQVPSAYYW--------------IGENLYLTGRFP 146 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 A F +L ++ + E A +AL+D+++ L++ Sbjct: 147 EARSIFSRILIDHPQSAKVEAARY-------KIALIDQSKTQEELLK 186 >gi|242280662|ref|YP_002992791.1| hypothetical protein Desal_3201 [Desulfovibrio salexigens DSM 2638] gi|242123556|gb|ACS81252.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio salexigens DSM 2638] Length = 571 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 73/212 (34%), Gaps = 36/212 (16%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQC 83 + +A + + S+ +Y ++ + Y L +E+N+++A ++F Sbjct: 392 VLVVLLAGAYTQAGHWKDSKALYTRALAVTENNHHMHYNYGNLLEREKNYTEAAKHFKAA 451 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL--VGMSY 141 + P + K++ A + G A L + + P DY L G+ Y Sbjct: 452 FKADP-SHY--KAMTSLASILSRKGDPYTALDLYQRALQINP-----DYAPALGNRGIVY 503 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q Q + + + + + P N + + +G Y Sbjct: 504 MQ--------QGKFESAIADIRKAQQLEPQQP-------------NHM----INMGLLYY 538 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 RG+ AA + L + + A + +A + Sbjct: 539 MRGDNSAAKEWLRRALQVDPNNKLARKNLALI 570 >gi|16127458|ref|NP_422022.1| hypothetical protein CC_3228 [Caulobacter crescentus CB15] gi|221236271|ref|YP_002518708.1| Tol system periplasmic component YbgF [Caulobacter crescentus NA1000] gi|13424912|gb|AAK25190.1| hypothetical protein CC_3228 [Caulobacter crescentus CB15] gi|220965444|gb|ACL96800.1| Tol system periplasmic component YbgF [Caulobacter crescentus NA1000] Length = 284 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 35/103 (33%), Gaps = 14/103 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q + V Y S AR+++ + R Y A + Sbjct: 177 NAEQAFAAYVNNYPESARTPEARYWLGETQ--------------FVREAYTDAAGNYIGA 222 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + + A +A +L + VAL EA + + +RYP+ Sbjct: 223 IRGWPQTSWAPDATLKLARSMVALRKTTEACRTLDELAKRYPK 265 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 40/113 (35%), Gaps = 8/113 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +++A L +++ A + F ++P + ++ Q+ Y AA Sbjct: 163 FKQAKDLLLAGDYANAEQAFAAYVNNYPESARTPEARYWLGETQFVREAYTDAAGNYIGA 222 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 I +P++ + S + R T + + + +RY +P Sbjct: 223 IRGWPQTSWAPDATLKLARSMVAL--------RKTTEACRTLDELAKRYPKAP 267 >gi|114567177|ref|YP_754331.1| hypothetical protein Swol_1662 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338112|gb|ABI68960.1| hypothetical protein Swol_1662 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 416 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 45/122 (36%), Gaps = 8/122 (6%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D+ ++ Y + ++ KA + + R++L A V Y +Y+ Sbjct: 290 DLEQEKWYYSEGYQAYLAGDYKKATSNLGMVVSMQSKSFLHREALYYLARVYYINSEYKN 349 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A +Y +P + D + +G Y +DQ+ Q + ++ E +S Sbjct: 350 AEKYFLDYTRDFPSTNYYDESLFYLGCIYY-------FDQQE-DKARQALEKLREVVPDS 401 Query: 173 PY 174 Y Sbjct: 402 GY 403 Score = 42.4 bits (99), Expect = 0.061, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 27/69 (39%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + R Y EY A F ++ + +E++ L Y D+AR+ + + Sbjct: 335 YYLARVYYINSEYKNAEKYFLDYTRDFPSTNYYDESLFYLGCIYYFDQQEDKARQALEKL 394 Query: 254 QERYPQGYW 262 +E P + Sbjct: 395 REVVPDSGY 403 >gi|126728388|ref|ZP_01744204.1| hypothetical protein SSE37_20397 [Sagittula stellata E-37] gi|126711353|gb|EBA10403.1| hypothetical protein SSE37_20397 [Sagittula stellata E-37] Length = 266 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 13/122 (10%), Positives = 40/122 (32%), Gaps = 16/122 (13%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA-- 113 + + A L + ++A + F + +P + + +L+ + G ++A Sbjct: 140 SEEADFRTAQDALDTGDHARASDLFANFRQTYPGSPLESAALVGEGQALEAQGDTREAAR 199 Query: 114 --ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + P+ + + +G + ++ + ++ + RY Sbjct: 200 RYLDAYSRF----PDDQVAPEALWRLGETLGKL--------GSVSEACVTLAEVGNRYPG 247 Query: 172 SP 173 S Sbjct: 248 SE 249 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 37/112 (33%), Gaps = 14/112 (12%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 D + + Y SP A V G+ A G+ A Sbjct: 152 LDTGDHARASDLFANFRQTYPGSPLESAAL--VGEGQALEAQ------------GDTREA 197 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 R+ + + D + A EA+ RL E L + EA ++ + RYP Sbjct: 198 ARRYLDAYSRFPDDQVAPEALWRLGETLGKLGSVSEACVTLAEVGNRYPGSE 249 >gi|15606205|ref|NP_213582.1| hypothetical protein aq_854 [Aquifex aeolicus VF5] gi|2983399|gb|AAC06984.1| hypothetical protein aq_854 [Aquifex aeolicus VF5] Length = 545 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 78/244 (31%), Gaps = 47/244 (19%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 L+L+E+ F +A E + +P + K L A + ++G+ ++A + E+ I Sbjct: 192 GNLYLQEKKFKEAEELYKSVLEKYPNSP---KILEKLAKLYTASGRIEEAIKIYEKLINL 248 Query: 124 YPESKN--VDYVYYLVGMSYAQMIRDV--------PYDQRAT-------------KLMLQ 160 P + N +Y L+ + + P + K + Sbjct: 249 KPRNVNYKTEYALLLLSTGEFDKAKKILEELYYVNPSNPNVAFAYALTLEATGELKKAKE 308 Query: 161 YMSRIVERYTNSPYVKGA-------------RFYVTVGRNQLA--AKEVEI--GRYYLKR 203 ++ R+ + V + LA KE+ YY K Sbjct: 309 IYENLLNRFPENIKVIERLIGIYLDLGNYEDAKRLIEKAKVLAPDKKEILFLEADYYSKT 368 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG-YW 262 +Y A+ + + +Y + Y L + A + + E P+ + Sbjct: 369 KQYDKALEILKKLEKDYPNDSRVY---FMEAIVYDNLGDIKNAEKALRKAIELDPENPDY 425 Query: 263 ARYV 266 Y+ Sbjct: 426 YNYL 429 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 87/240 (36%), Gaps = 37/240 (15%) Query: 50 SVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS-A 107 S + E+Y+ + L+ + + KA E + +P ++ + + Y Sbjct: 41 SALEKIPSPELYKDTIKVLLRNKEYEKAKELAKEFLETYPDEP---QAYIYL-YTIYKFL 96 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 + ++A + +E +P ++NV V +L Y + + + +E Sbjct: 97 KEDKKAFEVIKEAYKSFPFNENV--VLFL-ANEYINK--------GKLREAEKVLLEYME 145 Query: 168 RYTNSP---------YVK--GARFYVTVGRNQLAAKEVEI------GRYYLKRGEYVAAI 210 ++P Y+ + + L K+ G YL+ ++ A Sbjct: 146 TDPDNPLPYYLLGRIYLAKGDIQKGMEYFLKALEKKKYYAPAVLSLGNLYLQEKKFKEAE 205 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 ++ VL Y ++ E +A+L Y A ++EA ++ + P+ + L+ Sbjct: 206 ELYKSVLEKYPNSPKILEKLAKL---YTASGRIEEAIKIYEKLINLKPRNVNYKTEYALL 262 >gi|308049996|ref|YP_003913562.1| tol-pal system protein YbgF [Ferrimonas balearica DSM 9799] gi|307632186|gb|ADN76488.1| tol-pal system protein YbgF [Ferrimonas balearica DSM 9799] Length = 244 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 38/125 (30%), Gaps = 24/125 (19%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 ++ A +I QYP+S YY +G Q + + Sbjct: 138 KERRFDDAIPAFRRFIEQYPDSSYTPNAYYWLGQLLYN--------QGQLAEAGTMFATV 189 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR-FQLVLANYSDAE 224 ++Y S + + ++ K A R F+ V++ YS + Sbjct: 190 ADKYPKSSKRSDSLLKQGLIADRQGDK---------------ATAQRFFKQVISEYSGSS 234 Query: 225 HAEEA 229 A A Sbjct: 235 AANMA 239 Score = 39.3 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 46/128 (35%), Gaps = 9/128 (7%) Query: 56 YQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + Y +A+ KE+ F A F + +P + + + Y+ G+ +A Sbjct: 124 SEADAYTQALNLATKERRFDDAIPAFRRFIEQYPDSSYTPNAYYWLGQLLYNQGQLAEAG 183 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 ++ +YP+S G+ + ++ +++ Y+ S Sbjct: 184 TMFATVADKYPKSSKRSDSLLKQGLIADRQGDKAT--------AQRFFKQVISEYSGSSA 235 Query: 175 VKGARFYV 182 A+ ++ Sbjct: 236 ANMAQKHL 243 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 K + AIP F+ + Y D+ + A L + + EA + + + ++YP+ Sbjct: 138 KERRFDDAIPAFRRFIEQYPDSSYTPNAYYWLGQLLYNQGQLAEAGTMFATVADKYPKSS 197 Query: 262 WARYVETLVK 271 + ++L+K Sbjct: 198 --KRSDSLLK 205 Score = 35.5 bits (81), Expect = 8.7, Method: Composition-based stats. Identities = 14/120 (11%), Positives = 33/120 (27%), Gaps = 14/120 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 ++ +R + R +E+Y +S Y A +++ Sbjct: 129 YTQALNLATKERRFDDAIPAFRRFIEQYPDSSYTPNAYYWLGQLL--------------Y 174 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +G+ A F V Y + +++ + A+ + Y Sbjct: 175 NQGQLAEAGTMFATVADKYPKSSKRSDSLLKQGLIADRQGDKATAQRFFKQVISEYSGSS 234 >gi|307153690|ref|YP_003889074.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822] gi|306983918|gb|ADN15799.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822] Length = 275 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 39/244 (15%), Positives = 75/244 (30%), Gaps = 32/244 (13%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K + ++A+ + + E+Y V L N++ A F Sbjct: 2 KQTIRALGTLALVTNMIVISSVAVAQTQPPPQKQLNAVELYNNGVDKLSAANYTGAIADF 61 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV----DYVYYL 136 Q P + A+ G +++A + + + P YVY+L Sbjct: 62 TQAIALAPNDP---DAYYNRAYAYLILGDFEKAVADYSQALQINPNYTYAYGNRCYVYFL 118 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 Y I D + + + Y Y A+ + + L+ E I Sbjct: 119 S-KKYEAAITDCD-------KAISLQADYADFY---IYRGNAKSELNQNQEALSDYEKAI 167 Query: 197 ----------GRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALAL 242 + + RG ++ + +A+Y+D+ +A +Y AL Sbjct: 168 SLAANNPKTRAKAFYNRGRTYQSLENHKQAIADYTDSIALNPDDGDAYYNRAASYYALGN 227 Query: 243 MDEA 246 EA Sbjct: 228 NQEA 231 >gi|94967318|ref|YP_589366.1| polysaccharide deacetylase [Candidatus Koribacter versatilis Ellin345] gi|94549368|gb|ABF39292.1| polysaccharide deacetylase [Candidatus Koribacter versatilis Ellin345] Length = 871 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 48/138 (34%), Gaps = 16/138 (11%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAG 108 + + + ++ + KE+ + +A F + + P A + F + Sbjct: 747 EPSSPKSAFALNDEGMRLYKEKKYEEALAKFKEAAELAPTNALFAN----NTGFAFFRLA 802 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 KY +AA ++ IT P S+ + YV + D L+ + +E Sbjct: 803 KYAEAAEWYQKSITIDP-SRAIAYV----------NLGDADLKVDKRDDALKAFQKYLEL 851 Query: 169 YTNSPYVKGARFYVTVGR 186 N + R V+ + Sbjct: 852 MPNGKSAEYVRAKVSELQ 869 >gi|239501632|ref|ZP_04660942.1| hypothetical protein AbauAB_04911 [Acinetobacter baumannii AB900] Length = 294 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 17/120 (14%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209 Q K + M ++ + NS Y A F++ ++L Y A Sbjct: 189 QGGAKKAIAPMQNFIKNHPNSIYTGNAYFWL--------------AEFHLATDPVNYNEA 234 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + +V Y ++ A A+ +L A A + + + +YP+ A++ Sbjct: 235 KKNYNVVANQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKNKLLSQYPKSEEAKFFNK 294 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 9/122 (7%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAA 114 ++ Y A+ K+ KA ++ P + + A + Y +A Sbjct: 176 EKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSIYTGNAYFWLAEFHLATDPVNYNEAK 235 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 QYP S Y + + +DV + T QY ++++ +Y S Sbjct: 236 KNYNVVANQYPNSSKAPRALYQL----YSIAKDVD---KNTVSANQYKNKLLSQYPKSEE 288 Query: 175 VK 176 K Sbjct: 289 AK 290 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 8/79 (10%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163 Y G ++A + + +I +P S G +Y + + D + + Sbjct: 187 YKQGGAKKAIAPMQNFIKNHPNSIYT-------GNAYFWLAEFHLATDPVNYNEAKKNYN 239 Query: 164 RIVERYTNSPYVKGARFYV 182 + +Y NS A + + Sbjct: 240 VVANQYPNSSKAPRALYQL 258 >gi|110165339|gb|ABG49879.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Trichodesmium erythraeum IMS101] Length = 559 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 12/134 (8%), Positives = 40/134 (29%), Gaps = 20/134 (14%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSL 97 ++ +++ + + Y++ + ++Q++ A F++ + Sbjct: 420 ENPTEIFTKIENEQIEFNDFYQRGLAKYEQQDYQSALAEFDRAIDIDSSH------IDAY 473 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + + Y+ A + E I YY +V ++ Sbjct: 474 IYRGDAKDKLEDYEGAIADYNEAIKIDSSHPK---AYYSR--------ENVLRKAGDSRE 522 Query: 158 MLQYMSRIVERYTN 171 + + ++ N Sbjct: 523 AIADYDQAIKLDPN 536 >gi|145297816|ref|YP_001140657.1| hypothetical protein ASA_0747 [Aeromonas salmonicida subsp. salmonicida A449] gi|142850588|gb|ABO88909.1| conserved hypothetical protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 255 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 22/124 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y +A E +I QYP S V +Y +G S + Sbjct: 147 KDKNYDKAIPAFEGFIKQYPSSSYVPNAHYWLGQLLFNKGDRTG--------AAAQFSTV 198 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 +++ SP + + QL K+ E +Y + V+ Y + Sbjct: 199 ANKFSKSPKRADGLLKLGML-AQLDGKKAEAKTFY-------------EQVIKGYPNTSP 244 Query: 226 AEEA 229 A+ A Sbjct: 245 AQLA 248 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 48/134 (35%), Gaps = 17/134 (12%) Query: 57 QREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + + Y+ AV LK++N+ KA F + +P + + + ++ G AA+ Sbjct: 134 ENQAYDAAVNMVLKDKNYDKAIPAFEGFIKQYPSSSYVPNAHYWLGQLLFNKGDRTGAAA 193 Query: 116 L----GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 ++ S +GM D + + ++++ Y N Sbjct: 194 QFSTVANKFSK----SPKRADGLLKLGM-------LAQLDGKKA-EAKTFYEQVIKGYPN 241 Query: 172 SPYVKGARFYVTVG 185 + + A+ ++ Sbjct: 242 TSPAQLAKQSLSKL 255 >gi|224043182|ref|XP_002188878.1| PREDICTED: intraflagellar transport 88 homolog (Chlamydomonas) isoform 2 [Taeniopygia guttata] Length = 823 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 37/283 (13%), Positives = 79/283 (27%), Gaps = 56/283 (19%) Query: 6 GRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAV 65 + +FE ++ A T + +L Q++ L +D + K Sbjct: 436 LETLKMFEKKDSRVKSAAATNLSFLY--YLGNELEQATNYADLAVNSDRYNPAALTNKGN 493 Query: 66 LFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 + KA E++ D + ++L + +A ++ + Sbjct: 494 TIFANGDCEKAAEFYKEALRND----SLCTEALYNLGLAYKKLNRIDEALDC---FLKLH 546 Query: 125 PESKNVDYVYYLVGMSY-------------AQMIRDVPYDQ-------------RATKLM 158 N V Y + Y Q+I VP D Sbjct: 547 AILPNSAQVLYQLASIYQIMEDPNQAIEWLLQLISVVPTDPHVLSKLGNLYDTEGDKSQA 606 Query: 159 LQYMSRIVERYT--------------NSPYVKGARFYVTVGRNQL---AAKEVEIGRYYL 201 Y + ++ + + A Y L ++ + Y Sbjct: 607 FHYYCESYRYFPSNIEVIEWLGAYYIDTQFCEKAIEYFERAALILPTQVKWQLMVASCYR 666 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 + G Y A+ +++++ + D E + LV + L + Sbjct: 667 RSGNYQKALEKYKVIHRKFPD---NVECLRFLVRLCTDMGLKE 706 >gi|108761531|ref|YP_631209.1| putative lipoprotein [Myxococcus xanthus DK 1622] gi|27804879|gb|AAO22913.1| YgbF-like protein [Myxococcus xanthus] gi|108465411|gb|ABF90596.1| putative lipoprotein [Myxococcus xanthus DK 1622] Length = 286 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 16/134 (11%), Positives = 34/134 (25%), Gaps = 32/134 (23%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYY-----LVGMSYAQMIRDVPYDQRATKLMLQ 160 G + + + P D Y +G++ K + Sbjct: 176 RTGNVEGGVEKLRRFADENPRHPRADNALYFSGLGQIGLNEF-------------KGAAK 222 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 R++++Y + + R +L A + V+ + Sbjct: 223 TFERLIDKYPAGDAMLDGMLRLAECRMRLNQS----AD----------AKVLYTRVVTQF 268 Query: 221 SDAEHAEEAMARLV 234 A +A RL Sbjct: 269 PGTAAATQAEQRLA 282 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 26/78 (33%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 ++ R +Y + + F A + F + +P +L A + Sbjct: 193 ENPRHPRADNALYFSGLGQIGLNEFKGAAKTFERLIDKYPAGDAMLDGMLRLAECRMRLN 252 Query: 109 KYQQAASLGEEYITQYPE 126 + A L +TQ+P Sbjct: 253 QSADAKVLYTRVVTQFPG 270 Score = 35.1 bits (80), Expect = 9.9, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 46/143 (32%), Gaps = 10/143 (6%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 + D DV ++KAV L+ N E + + + P A +L S Sbjct: 152 NEDAGEQQDPDVLDAE--FDKAVNMLRTGNVEGGVEKLRRFADENPRHPRADNALYFSGL 209 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Q +++ AA E I +YP + + ++ + Sbjct: 210 GQIGLNEFKGAAKTFERLIDKYPAGDAMLDGMLRLAECRMRLNQSAD--------AKVLY 261 Query: 163 SRIVERYTNSPYVKGARFYVTVG 185 +R+V ++ + A + Sbjct: 262 TRVVTQFPGTAAATQAEQRLAAL 284 >gi|308270259|emb|CBX26871.1| hypothetical protein N47_A09000 [uncultured Desulfobacterium sp.] Length = 337 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 40/134 (29%), Gaps = 43/134 (32%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 R +++A F + ++ + + + Q +P A K+L + Sbjct: 39 PARSTFKEANDFFNQGFYTASLKKYEQIIEKYPTA--GDKALFEMGIIY----------- 85 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 YP + DY + L+ ++++ Y S Y Sbjct: 86 -------MYPGNALKDY-----------------------QKSLKCFDQLIKNYPESAYR 115 Query: 176 KGARFYVTVGRNQL 189 + ++ N + Sbjct: 116 TDSEVMISFINNAI 129 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 34/75 (45%), Gaps = 6/75 (8%) Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV----ALALMDEAREVVSLIQE 255 + +G Y A++ +++ ++ Y ++A+ + Y+ AL ++ + + + Sbjct: 50 FFNQGFYTASLKKYEQIIEKYPT--AGDKALFEMGIIYMYPGNALKDYQKSLKCFDQLIK 107 Query: 256 RYPQGYWARYVETLV 270 YP+ + E ++ Sbjct: 108 NYPESAYRTDSEVMI 122 >gi|281420092|ref|ZP_06251091.1| putative BatD protein [Prevotella copri DSM 18205] gi|281405892|gb|EFB36572.1| putative BatD protein [Prevotella copri DSM 18205] Length = 866 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 9/69 (13%), Positives = 23/69 (33%), Gaps = 3/69 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 A ++ N+ +A + + ++ GV+ + Y +A E Sbjct: 641 NNADTEYQKGNYQQAIRDYEEILNNY---GVSAEVYYNLGNAYYRTDNITKAVLNYERAH 697 Query: 122 TQYPESKNV 130 P +++ Sbjct: 698 LLSPGDEDI 706 >gi|126727498|ref|ZP_01743332.1| hypothetical protein RB2150_16427 [Rhodobacterales bacterium HTCC2150] gi|126703278|gb|EBA02377.1| hypothetical protein RB2150_16427 [Rhodobacterales bacterium HTCC2150] Length = 186 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 38/128 (29%), Gaps = 14/128 (10%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + + L E A ++F + P A L A Y A + A + E Sbjct: 69 LLRRGKNALDEGEVEAALQHFTALTDHAP--DFAEGWQLR-ATAFYLAELFAPAMADLER 125 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +T P Y+ +G+ + + L + + NS +K Sbjct: 126 AVTLNPNHFG---AYHGIGIISELL--------EFNEQALNAYEAAIAIHPNSTDIKEGL 174 Query: 180 FYVTVGRN 187 V N Sbjct: 175 KRVQALLN 182 >gi|113476015|ref|YP_722076.1| hypothetical protein Tery_2383 [Trichodesmium erythraeum IMS101] gi|110167063|gb|ABG51603.1| TPR repeat [Trichodesmium erythraeum IMS101] Length = 1421 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 45/130 (34%), Gaps = 21/130 (16%) Query: 45 DVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL--MS 100 + + ++ + Y +++ F++A E F D ++ S + Sbjct: 915 ENFKKALELEPKDLQTYNNLGAAYVELGEFNEAIELFSQALKVD------SQDSQIYQNL 968 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 V++ AG Q A + + I P YY G++Y + + Sbjct: 969 GVVRFKAGDKQGAIADYNQAIKLNPNKPE---AYYNRGIAY--------RFLGHNQDAMN 1017 Query: 161 YMSRIVERYT 170 +++++ + Sbjct: 1018 DFTKVLQLHP 1027 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 62/217 (28%), Gaps = 53/217 (24%) Query: 59 EVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E Y + +F A F + R P + A G + A + Sbjct: 1235 EAYNNLGNSRFQTGDFQGAMRDFGETLRIHP--KYVP-AYNNRALALLKLGDFSGATTDC 1291 Query: 118 EEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + P+ Y YY +G+ + +M + + + ++ Y Sbjct: 1292 YQALKINPK-----YGLAYYNLGLIHTEM--------GDLEQAILDYNEVLRIYP----- 1333 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE-------- 227 + N+ G YLK Y AI L + H Sbjct: 1334 ----RKIDAYVNR--------GLIYLKLKNYTQAIKDQTSALNINPNLPHVYSFRSEGYI 1381 Query: 228 ---------EAMARLVEAYVALALMDEAREVVSLIQE 255 + + + E Y ++E +++ I++ Sbjct: 1382 QLGEFKAGIDDLHKAAEIYQQQGKLEERDKMMKRIEK 1418 Score = 35.5 bits (81), Expect = 8.9, Method: Composition-based stats. Identities = 18/177 (10%), Positives = 48/177 (27%), Gaps = 45/177 (25%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-------Y 105 + ++ +Y +A++ ++ + + N+ + P + Sbjct: 1060 NPKHPEAIYNRAIIRRLTKDNQGSLDDLNKVIQLHP----------KYIDAYIKRSIVRF 1109 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 G ++ A + + P + YY + + Sbjct: 1110 DLGDHEGALKDLDSAVQLQPNN---AEAYYQRA--------NTKRSMGDILSAIADFENA 1158 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + Y A ++ I R L+RG+ A+ F+ + + Sbjct: 1159 IRLNP--KY-------------HQAYNDMGIVR--LRRGDISGAMENFEAAIQINPN 1198 >gi|115462585|ref|NP_001054892.1| Os05g0204900 [Oryza sativa Japonica Group] gi|55168273|gb|AAV44139.1| putative serine/threonine phosphatase [Oryza sativa Japonica Group] gi|113578443|dbj|BAF16806.1| Os05g0204900 [Oryza sativa Japonica Group] gi|125551205|gb|EAY96914.1| hypothetical protein OsI_18833 [Oryza sativa Indica Group] gi|215678857|dbj|BAG95294.1| unnamed protein product [Oryza sativa Japonica Group] gi|215736879|dbj|BAG95808.1| unnamed protein product [Oryza sativa Japonica Group] gi|222630558|gb|EEE62690.1| hypothetical protein OsJ_17493 [Oryza sativa Japonica Group] Length = 483 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 42/143 (29%), Gaps = 29/143 (20%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARKSLLMSAFVQ 104 +S + + E+ KA K FS A E + + + A ++ F Sbjct: 4 NSSLNEQKSEELKLKANDAFKANKFSLAIELYSQAIELNSSNAVY--WANRA-----FAH 56 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 +Y A + I + Y YY G +Y M K L+ Sbjct: 57 TKLEEYGSAVQDASKAIEI-----DARYSKGYYRRGAAYLAM--------GKFKEALKDF 103 Query: 163 SRIVERYTNSPYVKGARFYVTVG 185 ++ N P A + Sbjct: 104 QQVKRISPNDP---DATRKLKEC 123 >gi|186685696|ref|YP_001868892.1| lytic transglycosylase, catalytic [Nostoc punctiforme PCC 73102] gi|186468148|gb|ACC83949.1| Lytic transglycosylase, catalytic [Nostoc punctiforme PCC 73102] Length = 731 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 72/217 (33%), Gaps = 28/217 (12%) Query: 55 RYQREVYEKAVLFLKEQNFSK-AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + R +Y A + A + Q + FP A +LL A GK Sbjct: 259 KTSRNLYRTARGLQVGGKDKEIAIATYKQLVQQFPTTEEAGTALLRLAETA-KTGK--DG 315 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 E+ I+++P K + + DQ++ Q ++ +Y NS Sbjct: 316 LPYLEQVISKFP--KQAATALVQKAKTLETL-----KDQKSASAAWQL---LIAKYGNSD 365 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 A +I + K +YV A + ++ N ++ A A + Sbjct: 366 EA--------------AEYRWKIAQDKAKAKDYVGAWQWAEPIVTNNPNSILAPRAGFWV 411 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + +L E++ + ++P Y+A + Sbjct: 412 GKWAASLGKQQESQTAYDYVISQFPYSYYAWRAANMR 448 >gi|308271252|emb|CBX27861.1| hypothetical protein N47_C19190 [uncultured Desulfobacterium sp.] Length = 571 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 4/73 (5%) Query: 114 ASLGEEYITQYPESKNVDYV---YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +++ Y E + + Y+ G Y ++ + + RI +R+ Sbjct: 49 LECIDKFQKVYREDPSGPWASASLYMAGNLYIELHKR-SLKSSDKNEAIDIFERITKRFP 107 Query: 171 NSPYVKGARFYVT 183 +S Y AR + Sbjct: 108 DSKYAARAREEIE 120 Score = 38.9 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 24/60 (40%), Gaps = 7/60 (11%) Query: 44 RDVYLDSVTDVRYQREVYEKA-------VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 + VY + + +Y LK + ++A + F + ++ FP + A ++ Sbjct: 56 QKVYREDPSGPWASASLYMAGNLYIELHKRSLKSSDKNEAIDIFERITKRFPDSKYAARA 115 >gi|218439843|ref|YP_002378172.1| hypothetical protein PCC7424_2899 [Cyanothece sp. PCC 7424] gi|218172571|gb|ACK71304.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424] Length = 269 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 46/287 (16%), Positives = 79/287 (27%), Gaps = 75/287 (26%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ----REVYEKAVLFLKEQNFSKAYEYFNQ 82 S+ L+G S ++ T Q + +KA+ NF++A Y++Q Sbjct: 5 LISLITVVLIGCTALPSWAEPVNPPTLTEEQISQGEALAQKALEATDRGNFAEAEIYWSQ 64 Query: 83 CSRDFPFAG--VAR-------KSLLMSAFVQYS----------------------AGKYQ 111 FP + + L A + G+Y Sbjct: 65 LIEQFPTNPAVWSNRGNCRVSQYKLDEAIADFDKAIELAPHTPDPYLNRGTAFEAQGRYD 124 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A ++ PE Y G + + + L + E N Sbjct: 125 AAIEDYNRVLSLDPEDP---MAYNNRGNAQGGL--------GNWEEALADYQKATEIAPN 173 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM- 230 + + LA E+ G A + + ++ Y A+ Sbjct: 174 FAFAQ--------ANVALALYEM---------GNKEEATRKMRNLVRKYPMFPDMRAALT 216 Query: 231 ARLVEAYVALALMDEARE--VVSL-IQERYPQGYW----ARYVETLV 270 A L E EA V ++ I RY W R+ +V Sbjct: 217 AVLWEQ----GKQGEAESNWVAAVGIDHRYQDLDWVQNIRRWPPQMV 259 >gi|21244100|ref|NP_643682.1| hypothetical protein XAC3375 [Xanthomonas axonopodis pv. citri str. 306] gi|21109727|gb|AAM38218.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 601 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 38/111 (34%), Gaps = 9/111 (8%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 ++ + VC L + + D L D Q+ + + V ++ +F+ A + Sbjct: 324 FRRRAVVAVLAMVCVLPLAQPAHAADGTLWQRADQVQQQRL-DAGVQAYRKGDFAAAQKA 382 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 F + L G+Y A + + + Q+P ++ Sbjct: 383 FEAVP--------TDEGLYNLGNALARQGQYDAAIAAYDRALKQHPNQQDA 425 >gi|291279791|ref|YP_003496626.1| hypothetical protein DEFDS_1409 [Deferribacter desulfuricans SSM1] gi|290754493|dbj|BAI80870.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 522 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 61/160 (38%), Gaps = 28/160 (17%) Query: 19 LYKF--ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 +++F L + I V F+ + +V+D+ + R+ + +++ + A Sbjct: 1 MFRFCSKLVVLIFILVSFVYA-------ENNNPNVSDILFARQSIAEGKYYVEVGKYLDA 53 Query: 77 YEYFN-QCS---RDFPFAGVARKSLLMSA--FVQYSAGKYQQAASLGEEYITQYPESKNV 130 E+F + + +LL A F Y K ++AA + EE ++P+ Sbjct: 54 LEFFETALETTNNRYIVSD----ALLQKATLFAHYMD-KPEEAAKIYEEIFRKFPDLPQG 108 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + Y + + Y + K L+Y ++ Y Sbjct: 109 ETALYKLALLYNDFGDE--------KKALEYFKLYLQYYP 140 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 36/107 (33%), Gaps = 13/107 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L++ +E TN+ Y + + L K Y + A ++ + Sbjct: 52 DALEFFETALET-TNNRY---------IVSDALLQKATLFAHY---MDKPEEAAKIYEEI 98 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + D E A+ +L Y +A E L + YP G + Sbjct: 99 FRKFPDLPQGETALYKLALLYNDFGDEKKALEYFKLYLQYYPFGRFR 145 >gi|256830988|ref|YP_003159716.1| hypothetical protein Dbac_3225 [Desulfomicrobium baculatum DSM 4028] gi|256580164|gb|ACU91300.1| Tetratricopeptide domain protein [Desulfomicrobium baculatum DSM 4028] Length = 1031 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 74/228 (32%), Gaps = 46/228 (20%) Query: 58 REVYEKAVLFLKEQNFSKAYE--------------YFNQCSRDFPFAGVARK-SLLMSAF 102 E+Y+ A L ++ A + + + A + K LL Sbjct: 388 EELYKTAQSALIVEDLKTARAAVTQMIEHPKLPEPLYEEL--LYTLADITMKEGLLDL-- 443 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 G + E +S+NV +G Y + Y Sbjct: 444 ----EGNFASILEAYEAAKNSNLDSRNVPEALSRMG--YLHLFVG------NVPEAKGYF 491 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + +Y + ++A + G +YL+ +Y A FQ + N+ Sbjct: 492 DLLRRKYPDDR--------------RVAMIDYYWGEHYLRLKDYGRAAEHFQYAIQNFPM 537 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + + + L+ A+ L D+A VVS I+ R+P Y+ L+ Sbjct: 538 SLAVQPSTVGLLRAFTGLGYFDKALGVVSSIERRWP-SYYLSDPSFLM 584 >gi|242310653|ref|ZP_04809808.1| flagellar functional protein [Helicobacter pullorum MIT 98-5489] gi|239523051|gb|EEQ62917.1| flagellar functional protein [Helicobacter pullorum MIT 98-5489] Length = 788 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 75/196 (38%), Gaps = 26/196 (13%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS---AGKYQQAASLGEEYI 121 L+++++ +A ++ +++P R L M + Y++ +LG+ ++ Sbjct: 179 QSLLEKKSYQEALNNIDEMLQNYPETIFKRDILFMKLKALQNLQNQEDYEEIMALGKAWL 238 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 YP +V V L+ +YA+M + Y R+ + Y + Y Sbjct: 239 NAYPADIHVPEVLLLMAENYAKM--------NFFEEASYYYDRLFKEYKDDKY------- 283 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 LA + G KRG+ A+ +Q VL D E A A L E Y Sbjct: 284 -----ELLAR--LSYGEKIFKRGDKKRALELYQSVLNQTQDLEIASLASLLLGEYYKDAG 336 Query: 242 LMDEAREVVS-LIQER 256 +A++ + ++ Sbjct: 337 ESKQAQDYLKNILDAN 352 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 41/122 (33%), Gaps = 12/122 (9%) Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 Y I+ + ++++ + L + +++ Y + + + F L +E Y Sbjct: 174 YFLNIQSL-LEKKSYQEALNNIDEMLQNYPETIFKRDILFMKLKALQNLQNQED-----Y 227 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + A L Y H E + + E Y + +EA + + Y Sbjct: 228 EEIMALGKAW------LNAYPADIHVPEVLLLMAENYAKMNFFEEASYYYDRLFKEYKDD 281 Query: 261 YW 262 + Sbjct: 282 KY 283 >gi|163816722|ref|ZP_02208085.1| hypothetical protein COPEUT_02912 [Coprococcus eutactus ATCC 27759] gi|158447979|gb|EDP24974.1| hypothetical protein COPEUT_02912 [Coprococcus eutactus ATCC 27759] Length = 552 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 41/116 (35%), Gaps = 23/116 (19%) Query: 89 FAGVARK-------SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + A + + + SA +Y Y+ A + ++ N D Y GM Y Sbjct: 343 YGDYASQVLSDDNKARVQSAISKYENMSYEAAMDDLNRVLQ---DTPNSDVALYYKGMCY 399 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY-----VTVGRNQLAAK 192 ++ + +++VE NS Y A + + G+++ A K Sbjct: 400 LKLSDENN--------ATLVFNQLVENCPNSVYYAYACEHADDEAIQAGKDKAAQK 447 Score = 43.6 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 7/95 (7%) Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 S Y A + + A + I +Y + Y AA+ VL D +++ A+ Sbjct: 341 SKYGDYASQ--VLSDDNKARVQSAISKY--ENMSYEAAMDDLNRVL---QDTPNSDVALY 393 Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 Y+ L+ + A V + + E P + Y Sbjct: 394 YKGMCYLKLSDENNATLVFNQLVENCPNSVYYAYA 428 >gi|153006245|ref|YP_001380570.1| Tol-Pal system YbgF [Anaeromyxobacter sp. Fw109-5] gi|152029818|gb|ABS27586.1| Tol-Pal system YbgF [Anaeromyxobacter sp. Fw109-5] Length = 291 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 46/129 (35%), Gaps = 22/129 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 AG A L EEY+ ++P Y G ++ +DQ+ + L ++ Sbjct: 167 EAGNKGVARELYEEYVRRWPADPRASDAGYRAG--------ELLFDQKRFREALLAYGKV 218 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 E + S A + + + E+ K A + + +L Y ++ Sbjct: 219 AEEFPKSARAPDA---MLGAADAMVKLEM-------KTEA-KAVL---EQLLERYPRSDA 264 Query: 226 AEEAMARLV 234 A+ A RL Sbjct: 265 AKTAKERLA 273 Score = 43.2 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 14/111 (12%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + V R+ P A + + + A+ + V Sbjct: 174 ARELYEEYVRRWPADPRASDAGYRAGELL--------------FDQKRFREALLAYGKVA 219 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + + A +AM +A V L + EA+ V+ + ERYP+ A+ + Sbjct: 220 EEFPKSARAPDAMLGAADAMVKLEMKTEAKAVLEQLLERYPRSDAAKTAKE 270 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 4/110 (3%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLD----SVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 FFS+A + +R++Y + D R Y L ++ F +A + Sbjct: 156 AAFFSLAKSEDEAGNKGVARELYEEYVRRWPADPRASDAGYRAGELLFDQKRFREALLAY 215 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + + +FP + A ++L +A +A ++ E+ + +YP S Sbjct: 216 GKVAEEFPKSARAPDAMLGAADAMVKLEMKTEAKAVLEQLLERYPRSDAA 265 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 50/155 (32%), Gaps = 8/155 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 A G L ++ + + A + N A E + + R +P Sbjct: 129 AALRGAGALEAFEAKQRLATLQRPDDKAAFFSLAKSEDEAGNKGVARELYEEYVRRWPAD 188 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 A + + + + ++++A + ++P+S ++G + D Sbjct: 189 PRASDAGYRAGELLFDQKRFREALLAYGKVAEEFPKSARAPDA--MLGAA------DAMV 240 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + +++ERY S K A+ + Sbjct: 241 KLEMKTEAKAVLEQLLERYPRSDAAKTAKERLAAL 275 >gi|254521184|ref|ZP_05133239.1| TPR domain protein [Stenotrophomonas sp. SKA14] gi|219718775|gb|EED37300.1| TPR domain protein [Stenotrophomonas sp. SKA14] Length = 611 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 20/65 (30%), Gaps = 8/65 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + V + +F+ A + F D A G Y +A + + + Sbjct: 380 AEGVQAYRNGDFAGARKQFEGIDSDA--GWY------NLANALARQGNYDEAIAAYDRAL 431 Query: 122 TQYPE 126 +P Sbjct: 432 ALHPG 436 >gi|118357165|ref|XP_001011832.1| DNA polymerase family B containing protein [Tetrahymena thermophila] gi|89293599|gb|EAR91587.1| DNA polymerase family B containing protein [Tetrahymena thermophila SB210] Length = 2315 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 36/237 (15%), Positives = 73/237 (30%), Gaps = 54/237 (22%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + + + +K L+LK+ +A F + +P S + F Y GK+Q Sbjct: 1784 ENTESYQYLVDKGRLYLKQGKLEEAQNLFQLALKYYPKTDY--LSHHLLGFTFYQQGKFQ 1841 Query: 112 QAASLGEEYITQYPESKNV--------------DYV--YYLVGM----SYA----QMIRD 147 A E + P ++ D Y + SY + Sbjct: 1842 DALQKFNESLQINPLQVDIYNTIGSIYDQQNMKDQAIKQYQKALEIQPSYYTALLNLGNL 1901 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 +D+ K + + ++ NS + V + +Y Sbjct: 1902 YFWDKNMVKEANECFQKALDINPNS---------LQVLKR--------AALFYYSN---- 1940 Query: 208 AAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 +FQ + NY A E L + Y + + +A +++ ++ P+ Sbjct: 1941 ---NQFQEAIQNYEKALSIDPQDYEIFGCLAQVYHQIGNIQKAIKILEKAIKQNPRN 1994 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 64/194 (32%), Gaps = 34/194 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 A+L N ++ F + + P +L F+ Y G Y +A S ++ I Sbjct: 2136 NIALLHFMNGNTEESKICFEKTLKIKPDHSY---ALTNLGFIYYLQGDYSKAISFYQQSI 2192 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 ++ + + +G+ Y Q + Q + ++ N Sbjct: 2193 EI---DPSMHHGFNNLGLIYQH--------QGLAEQAKQQYEKALQILPN---------- 2231 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 N L G Y K G+ AI ++ +++ + Y + Sbjct: 2232 FAQALNNL-------GSIYYKNGKIEDAIEYYKKAQQVDPQFLEPYKSLGYI---YQKIG 2281 Query: 242 LMDEAREVVSLIQE 255 ++ EA+ ++ + + Sbjct: 2282 MVVEAKNMLDQLTQ 2295 >gi|161485632|ref|YP_720352.2| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Trichodesmium erythraeum IMS101] Length = 541 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 12/134 (8%), Positives = 40/134 (29%), Gaps = 20/134 (14%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSL 97 ++ +++ + + Y++ + ++Q++ A F++ + Sbjct: 402 ENPTEIFTKIENEQIEFNDFYQRGLAKYEQQDYQSALAEFDRAIDIDSSH------IDAY 455 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + + Y+ A + E I YY +V ++ Sbjct: 456 IYRGDAKDKLEDYEGAIADYNEAIKIDSSHPK---AYYSR--------ENVLRKAGDSRE 504 Query: 158 MLQYMSRIVERYTN 171 + + ++ N Sbjct: 505 AIADYDQAIKLDPN 518 >gi|319940887|ref|ZP_08015226.1| hypothetical protein HMPREF9464_00445 [Sutterella wadsworthensis 3_1_45B] gi|319805769|gb|EFW02550.1| hypothetical protein HMPREF9464_00445 [Sutterella wadsworthensis 3_1_45B] Length = 248 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 47/135 (34%), Gaps = 8/135 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S+ +++ Y+ AV L+ + A + F + +F + +L ++ Sbjct: 117 SIEVSAEEKKAYDTAVALLQTGKYGDAEKAFKDFNDNFKKSPYRMDALFWWGTSAFANEH 176 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ A S + + ++ + LV S A + + +I++ Y Sbjct: 177 YKTAISSQNQLLREFSKGARAADAMMLVASSQAAS--------GSINAAKATLQKIIKTY 228 Query: 170 TNSPYVKGARFYVTV 184 + K A + Sbjct: 229 PKTDVAKEAAQRIRE 243 >gi|218438344|ref|YP_002376673.1| hypothetical protein PCC7424_1361 [Cyanothece sp. PCC 7424] gi|218171072|gb|ACK69805.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424] Length = 1276 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 60/210 (28%), Gaps = 46/210 (21%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + V K + + +A + ++Q + P A + +YQ+A ++ Sbjct: 464 YNQGVALGKLERYQEALQSYDQAIKLNP--NYAE-AWYNQGVALGKLERYQEALQSYDQA 520 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I P N +Y G + + + Q + ++ N Sbjct: 521 IKLNP---NYAEAWYNRGFALGNL--------ECYQEAFQSFDKAIQLNPNDAEAW--NN 567 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEA 236 RN + R+Q L +Y + EA+ A Sbjct: 568 RGFSLRN----------------------LERYQEALQSYDKAIQLNPNYAEALFNRGVA 605 Query: 237 YVALALMDEA-REVVSLIQERYPQGY--WA 263 L +EA + IQ P W Sbjct: 606 LERLERYEEAFQSFDKAIQLN-PNNTEAWY 634 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 59/165 (35%), Gaps = 21/165 (12%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 Y Y + + + +A++ F++ + P A F + +YQ+A Sbjct: 527 YAEAWYNRGFALGNLECYQEAFQSFDKAIQLNPNDAEAWN---NRGFSLRNLERYQEALQ 583 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 ++ I P N + G++ ++ R + Q + ++ N+ Sbjct: 584 SYDKAIQLNP---NYAEALFNRGVALERLER--------YEEAFQSFDKAIQLNPNN--- 629 Query: 176 KGARFYVTVGRNQLAAKEVEIGRY----YLKRGEYVAAIPRFQLV 216 A + V +L + I Y +KR Y+A I R L+ Sbjct: 630 TEAWYNRGVVLGKLERHQEAIASYDQALVIKRDFYLAWINRGNLI 674 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 72/212 (33%), Gaps = 28/212 (13%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + V L + +A F++ P A +L FV +YQ+A ++ + Sbjct: 92 RGVALLHLGKYEEALSTFDKALELNP--NYAE-ALSNRGFVLGKLERYQEALPTFDKALE 148 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP----YVKGA 178 P N + G++ ++ R + Q + +E N+ Y A Sbjct: 149 LNP---NYAEALFNRGVALERLER--------YQEAFQSYDKALELNPNNAVAWNYRGVA 197 Query: 179 RFYVTVGRNQLA--AKEVEI----GRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEE 228 + + L K +E+ + RG + + R+Q L +Y A + E Sbjct: 198 LGKLERYQEALPTFDKALELNPNNAEVWFNRGVALVNLERYQEALQSYEKALKLNPNYGE 257 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 A A +L EA E +E P Sbjct: 258 AWNYRGVALESLERYQEALEAFDKARELNPNN 289 Score = 35.5 bits (81), Expect = 8.3, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 45/121 (37%), Gaps = 16/121 (13%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 Y Y + V + + +A+++++Q + P ++ + +Y++A Sbjct: 391 YAEAWYNQGVALGMLERYEEAFQFYDQAIKLNPNHA---QAWNNRGVALGNLERYEEAFQ 447 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 ++ I P +Y G++ ++ R + LQ + ++ N Y Sbjct: 448 SFDKAIKLNPNH---AEAWYNQGVALGKLER--------YQEALQSYDQAIKLNPN--YA 494 Query: 176 K 176 + Sbjct: 495 E 495 >gi|302342825|ref|YP_003807354.1| response regulator receiver protein [Desulfarculus baarsii DSM 2075] gi|301639438|gb|ADK84760.1| response regulator receiver protein [Desulfarculus baarsii DSM 2075] Length = 349 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 30/215 (13%), Positives = 78/215 (36%), Gaps = 30/215 (13%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + +Y K + ++E+ + +A E F + + SA + Y+ G Sbjct: 137 PQAFEAQRLYAKGLQLMEEKRWEEALESFRRILGIY-----------ESAEIYYNMGYIS 185 Query: 112 QAASLGEEYITQY-----------PESKNVDYVYYLVG---MS--YAQMIRDVPYDQRAT 155 A EE I + + + Y + ++ + ++ D+ ++R Sbjct: 186 TARGSYEEAIHYFRKATQINNAFAQAHEKMGECYRQLARPKLAQKHFELAADIYMERRMD 245 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 Q +++++E N+ V + + + + E+ I +Y A+ Sbjct: 246 SNAEQVLNQVLELNPNTINVYNS---LGILYRRQGRYELAIKQYKKALKVNPEAVNIHYN 302 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 + Y + + + A+ L +A +A++++ Sbjct: 303 LARIYYETKDYQRALILLEQALKINPDFADAQDML 337 >gi|224043184|ref|XP_002188826.1| PREDICTED: intraflagellar transport 88 homolog (Chlamydomonas) isoform 1 [Taeniopygia guttata] Length = 823 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 37/283 (13%), Positives = 79/283 (27%), Gaps = 56/283 (19%) Query: 6 GRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAV 65 + +FE ++ A T + +L Q++ L +D + K Sbjct: 436 LETLKMFEKKDSRVKSAAATNLSFLY--YLGNELEQATNYADLAVNSDRYNPAALTNKGN 493 Query: 66 LFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 + KA E++ D + ++L + +A ++ + Sbjct: 494 TIFANGDCEKAAEFYKEALRND----SLCTEALYNLGLAYKKLNRIDEALDC---FLKLH 546 Query: 125 PESKNVDYVYYLVGMSY-------------AQMIRDVPYDQ-------------RATKLM 158 N V Y + Y Q+I VP D Sbjct: 547 AILPNSAQVLYQLASIYQIMEDPNQAIEWLLQLISVVPTDPHVLSKLGNLYDTEGDKSQA 606 Query: 159 LQYMSRIVERYT--------------NSPYVKGARFYVTVGRNQL---AAKEVEIGRYYL 201 Y + ++ + + A Y L ++ + Y Sbjct: 607 FHYYCESYRYFPSNIEVIEWLGAYYIDTQFCEKAIEYFERAALILPTQVKWQLMVASCYR 666 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 + G Y A+ +++++ + D E + LV + L + Sbjct: 667 RSGNYQKALEKYKVIHRKFPD---NVECLRFLVRLCTDMGLKE 706 >gi|149922306|ref|ZP_01910742.1| hypothetical protein PPSIR1_18567 [Plesiocystis pacifica SIR-1] gi|149816850|gb|EDM76338.1| hypothetical protein PPSIR1_18567 [Plesiocystis pacifica SIR-1] Length = 384 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 44/142 (30%), Gaps = 15/142 (10%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 S V + E+ + A ++F+ A + + R +P + AR + + Sbjct: 253 SSDPSVAKAKPKSSKSADELLDLARSQRTAKDFAAAAATYEELVRSYPSSAKARSAHVSV 312 Query: 101 AFVQYS-AGKYQQAASLGEEYITQYPESKNVDYVYY--LVGMSYAQMIRDVPYDQRATKL 157 A + +A + Y+ + + +Y + + Q T Sbjct: 313 AQLYLGPLDNPSKAIRHFDRYLKR--GGPLAEEAHYGKIRAL----------RKQGQTAK 360 Query: 158 MLQYMSRIVERYTNSPYVKGAR 179 + ++ Y S Y R Sbjct: 361 AKTEAAAFLDDYPQSAYADAVR 382 >gi|294508106|ref|YP_003572164.1| Conserved hypothetical protein containing tetratricopeptide repeat domain [Salinibacter ruber M8] gi|294344434|emb|CBH25212.1| Conserved hypothetical protein containing tetratricopeptide repeat domain [Salinibacter ruber M8] Length = 594 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 40/100 (40%), Gaps = 1/100 (1%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 F + +G S+ ++++++ ++E+ V + ++ A+E F + Sbjct: 39 VCVFGFLLLLSIGMPGTSAHAQQAEAISEIENAELLFEEGVAAFERGEYATAHERF-RLV 97 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 ++ +LLM G+Y+ A E + QY Sbjct: 98 SEYALNRKTTAALLMDGKALVQLGRYRDAIGRLEALLNQY 137 >gi|257061460|ref|YP_003139348.1| lytic transglycosylase catalytic [Cyanothece sp. PCC 8802] gi|256591626|gb|ACV02513.1| Lytic transglycosylase catalytic [Cyanothece sp. PCC 8802] Length = 730 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 73/212 (34%), Gaps = 31/212 (14%) Query: 55 RYQREVYE--KAVLFLKEQNFSKAYEY-FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + +Y + N + + + FP A A +L A + + Sbjct: 262 STAQNLYRIGRGQQLQPNGNNKATVQAAYQKLLVAFPQAPEAALALQRLA----QLSQPE 317 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A S ++ I ++P + Y +++ + ATK ++ +Y Sbjct: 318 TAISYLDQLINKFP--EQAGYALVKKA----ELLDKLNRQGEATK----IRQTLLSKYAK 367 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 S + A I + +RG+ + A Q ++ N ++ A +A Sbjct: 368 S--------------DATAEYRWLIAQKAAERGDALKAWTWAQPIVVNNPESPLAPKAGF 413 Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + + L ++EA + R+PQ Y+A Sbjct: 414 WVGKWAQQLGRLEEAETAFEYVVTRHPQSYYA 445 >gi|255654121|ref|ZP_05399530.1| TPR repeats containing protein [Clostridium difficile QCD-23m63] gi|296449840|ref|ZP_06891607.1| TPR repeats containing protein [Clostridium difficile NAP08] gi|296877904|ref|ZP_06901924.1| TPR repeats containing protein [Clostridium difficile NAP07] gi|296261327|gb|EFH08155.1| TPR repeats containing protein [Clostridium difficile NAP08] gi|296431101|gb|EFH16928.1| TPR repeats containing protein [Clostridium difficile NAP07] Length = 483 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 33/93 (35%), Gaps = 15/93 (16%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + ++ A + N+++A + ++ +P K+ A Y +YQ Sbjct: 100 SKKPSPDAIFLSARIEYLNGNYTQAEKLYDNLIEQYP-DKFKSKAEDELALTYYQTNQYQ 158 Query: 112 QA------------ASLGEEYITQYPESKNVDY 132 +A + + + ++P +D+ Sbjct: 159 KADKLSSVKTNNALLEMMKAFKDKHPN--KIDW 189 >gi|254423059|ref|ZP_05036777.1| Transglycosylase SLT domain protein [Synechococcus sp. PCC 7335] gi|196190548|gb|EDX85512.1| Transglycosylase SLT domain protein [Synechococcus sp. PCC 7335] Length = 771 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 51/162 (31%), Gaps = 19/162 (11%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 ++ + L ER V + + R Y A + +Q +A + + Sbjct: 56 ALNLALLQPAERAVDLSVMANGTAGIDRDRARYMLATDLINQQQADQALPLLRNLEKSY- 114 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI--R 146 +A LL A Q + + A + I +YPES YL+G + Sbjct: 115 -QVLAPYVLLRQAQAQAATRDQESAIATWTRLIKKYPESTATAEALYLLGQPSIDQVSAN 173 Query: 147 DVPYDQRATKLMLQ---------------YMSRIVERYTNSP 173 +Q +T Y + ++ +Y P Sbjct: 174 QASANQTSTSQASANQTNDSQPATSPSSTYWNTLITQYPAHP 215 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 37/237 (15%), Positives = 69/237 (29%), Gaps = 32/237 (13%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 A WE Q+ + R +Y A + +A + + FP Sbjct: 284 AAIGFGYWETQNYAEAGDAYAKAPRTPLNLYRAARGKERGDKDKEAIVLYQMLDKAFPAE 343 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGE----EYITQYPESKNVDYVYYLVGMSYAQMIR 146 LL A K Q A + + + +P+ Sbjct: 344 PETADGLLNLA----GLQKGQSALATLDEVVGRFSNSFPD----------KAAEAIADRA 389 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 + + ++ Q I+ Y+ S A+ + + K Sbjct: 390 TLLESLGSAEVAKQAQDSILSEYSGSK--AAAQIRLKRAKEN------------AKANNL 435 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 AI Q ++ E A EA L + + +D+AR+ + +P+ Y+A Sbjct: 436 TGAISWAQQLVDAAPSGERAAEAGFWLGKWHSQQDQVDQARKAFENVIVNHPESYYA 492 >gi|321263865|ref|XP_003196650.1| general transcriptional repressor [Cryptococcus gattii WM276] gi|317463127|gb|ADV24863.1| General transcriptional repressor, putative [Cryptococcus gattii WM276] Length = 1105 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 46/139 (33%), Gaps = 22/139 (15%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108 TD + Y ++ Q ++KAYE + Q P + Y Sbjct: 369 TDPSDAQSWYLLGRAYMAAQRYNKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIA 422 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y+ A I P + V+Y +G S + + D L SR +E Sbjct: 423 QYRDALDAYSRAIRLNP---YISEVWYNLG-SLYESCNNQMAD------ALDAYSRALEL 472 Query: 169 YTNSPYVKGARFYVTVGRN 187 N+ + + + +N Sbjct: 473 DPNN---TVIKQRMALLQN 488 >gi|296481738|gb|DAA23853.1| intraflagellar transport 88 homolog [Bos taurus] Length = 825 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 35/259 (13%), Positives = 75/259 (28%), Gaps = 55/259 (21%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99 Q+S L +D + K ++ KA E++ D +L Sbjct: 469 QASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDCSCTE----ALYN 524 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIR 146 + +A ++ + +N V Y + Y Q+I Sbjct: 525 IGLTYKKLNRLDEALDC---FLKLHAILRNSAQVLYQIANVYELMEDPSQAMEWLMQLIS 581 Query: 147 DVPYDQRATKL-------------MLQYMSRIVERYT--------------NSPYVKGAR 179 VP D RA QY + ++ + + A Sbjct: 582 VVPTDSRALSKLGGLYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAI 641 Query: 180 FYVT---VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 Y + + ++ + + + G Y A+ ++ + + + E + LV Sbjct: 642 QYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPE---NVECLRFLVRL 698 Query: 237 YVALALMDEAREVVSLIQE 255 + L E +E + ++ Sbjct: 699 CTDIGLK-EVQEYATKLKR 716 >gi|206889631|ref|YP_002249532.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741569|gb|ACI20626.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 708 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 3/67 (4%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A + F +A E + S+ PF + A + Y +A E Y+ Sbjct: 627 AEVLFTNNKFEEAAEELEKVSQLQPFNP---QIYFNRAIIYEKISDYAKAIENMEVYLQL 683 Query: 124 YPESKNV 130 P + N Sbjct: 684 NPNAPNA 690 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 30/78 (38%), Gaps = 6/78 (7%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 +L ++ + A Q P + + L+ + KY++A + YI Q P+ Sbjct: 263 YLAQRKYKDAIAQLEQAVSLAPKSAI---LLIKLHDIYIERSKYEKAIEAVKRYIEQRPD 319 Query: 127 SKNVDYVYYLVGMSYAQM 144 Y + + Y ++ Sbjct: 320 DH---YAPLRLALLYFKL 334 Score = 35.5 bits (81), Expect = 7.9, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 42/140 (30%), Gaps = 31/140 (22%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +A + + ++ P+ N ++ QR K + + + Sbjct: 231 KNNDIPEALAASQMHVQLAPKDPN-----------GYLLLYKCYLAQRKYKDAIAQLEQA 279 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V S + + + Y++R +Y AI + + D + Sbjct: 280 VSLAPKSA--------ILLIKLH---------DIYIERSKYEKAIEAVKRYIEQRPDDHY 322 Query: 226 AEEAMARLVEAYVALALMDE 245 A +A L Y L DE Sbjct: 323 APLRLALL---YFKLGKYDE 339 >gi|158334744|ref|YP_001515916.1| TPR repeat-containing serine/threonine protein kinase [Acaryochloris marina MBIC11017] gi|158304985|gb|ABW26602.1| serine/threonin protein kinase with TRP repeats [Acaryochloris marina MBIC11017] Length = 670 Score = 46.6 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 38/257 (14%), Positives = 82/257 (31%), Gaps = 41/257 (15%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 A S++ + R SS + +S T + +N+ A ++ Sbjct: 313 IAFLTLGSLSGITYMIATRMSSSETSGESATAFI------RRGDAKYNRRNYEDAIADYS 366 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + R + ++ L +Y+ +Y +A +E + P DYVY Sbjct: 367 EAIRL---SPDNAQAYLGRGNARYALEEYPEALIDYDEALKHDP-----DYVY------A 412 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-- 199 +V + ++ + +Q ++ ++ A + ++ L I + Sbjct: 413 FNGRGNVKFARKDFEGAIQDYNQAIQSDPQ---FALAFYNRGNVKSALKEHRAAIEDFSQ 469 Query: 200 -----------YLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMD 244 YL RG AA+ + + +YS+ + A A L Sbjct: 470 AIRLNPQYEPAYLLRGVSKAALTNYAGAIEDYSETIRLNPDNDNAFNSRGVARYKLGESR 529 Query: 245 EA-REVVSLIQERYPQG 260 +A ++ I+ Sbjct: 530 QAIKDFTEAIRLNPKNS 546 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 60/191 (31%), Gaps = 32/191 (16%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 +D +D ++ Y + + + A E F+Q R P + L+ Sbjct: 431 QDYNQAIQSDPQFALAFYNRGNVKSALKEHRAAIEDFSQAIRLNP--QY-EPAYLLRGVS 487 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + + Y A E I P++ N + G++ ++ ++ ++ + Sbjct: 488 KAALTNYAGAIEDYSETIRLNPDNDN---AFNSRGVARYKL--------GESRQAIKDFT 536 Query: 164 RIVERYTNSPYV-----------KGARFYVTVGRNQL---AAKEVEIGRYYLKRGEYVAA 209 + + + K A + + Y RG+ A Sbjct: 537 EAIRLNPKNSFAYCNRGESKLKLKDAEGAIKDCTETIRLDPQSSFA----YSARGKAHHA 592 Query: 210 IPRFQLVLANY 220 + R++ + +Y Sbjct: 593 LKRYKAAIEDY 603 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 52/186 (27%), Gaps = 37/186 (19%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + + +Y+ Y+ A + E I S + Y G + + Sbjct: 344 AFIRRGDAKYNRRNYEDAIADYSEAIRL---SPDNAQAYLGRGNARYALEEYP------- 393 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLK 202 L ++ + Y R V R E I Y + Sbjct: 394 -EALIDYDEALKHDPDYVYAFNGRGNVKFARKDF---EGAIQDYNQAIQSDPQFALAFYN 449 Query: 203 RGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEA---REVVSLIQE 255 RG +A+ + + ++S A E A L+ AL + A + I+ Sbjct: 450 RGNVKSALKEHRAAIEDFSQAIRLNPQYEPA--YLLRGVSKAALTNYAGAIEDYSETIRL 507 Query: 256 RYPQGY 261 P Sbjct: 508 N-PDND 512 >gi|242793584|ref|XP_002482194.1| serine/threonine protein phosphatase PPT1 [Talaromyces stipitatus ATCC 10500] gi|218718782|gb|EED18202.1| serine/threonine protein phosphatase PPT1 [Talaromyces stipitatus ATCC 10500] Length = 943 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 18/156 (11%), Positives = 51/156 (32%), Gaps = 29/156 (18%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYS 106 SV + ++ K + ++ A +++ Q + P + + ++ Sbjct: 4 SVPEAANALKL--KGNAAFAKHDWPTAIDFYTQAIDQYDKEP-SFFSNRAQ-----AHIK 55 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y A + + + P + Y+ ++ ++ + L+ ++ Sbjct: 56 MEAYGYAIADATKALELDPTNVK---AYWRRALANTAILN--------PRAALKDYKSVI 104 Query: 167 ERYTNSPYVKGARFYVTVG----RNQLAAKEVEIGR 198 +R N+ A+ +T R K +E+ Sbjct: 105 KREPNNQ---TAKLRLTECEKLVRRMDFEKAIEVAE 137 >gi|755486|gb|AAA86720.1| mutations in the mouse Tg737 gene cause polycystic kidney disease [Homo sapiens] Length = 824 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 428 QKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 487 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 488 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 540 Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157 ++ + +N V Y + Y Q++ +P D + Sbjct: 541 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 600 Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196 QY + ++ + + A Y + + ++ + Sbjct: 601 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 660 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + + G Y A+ ++ + + E + LV L L D A+E ++ Sbjct: 661 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 715 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 76/261 (29%), Gaps = 69/261 (26%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A I I F G + V ++ E+ KAV +L+++++++A E Sbjct: 383 AKLIAPVIETSFAAGCDWCV-EVVKASQYVELANDLEI-NKAVTYLRQKDYNQAVEILKV 440 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG------EEYITQYP---ESK----- 128 + V + + + Y + QA+S + Y P +K Sbjct: 441 LEKKD--NRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRY---NPAALTNKGNTVF 495 Query: 129 -NVDY-------------------VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 N DY Y +G++Y ++ R L ++ Sbjct: 496 ANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR--------LDEALDCFLKLHAI 547 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 NS A +I Y AI V++ Sbjct: 548 LRNS-----------------AEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQV-- 588 Query: 229 AMARLVEAYVALALMDEAREV 249 +++L E Y +A + Sbjct: 589 -LSKLGELYDREGDKSQAFQY 608 >gi|282899388|ref|ZP_06307356.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] gi|281195755|gb|EFA70684.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] Length = 508 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 68/189 (35%), Gaps = 35/189 (18%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 ++ +V + + + R+ Y + + L + N+ ++ + F+Q + P A + Sbjct: 269 NTTATGEVPQERLNSPQSARDFYARGITKLDQLNYKESLDDFDQAIKIDP--KYAE-AYF 325 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY-YL-VGMSYAQMIRDVPYDQRATK 156 + +Y++A + I P YV YL G +Y + D + Sbjct: 326 KRGYALSWLRRYEEALLDFNQVIALDPN-----YVDGYLNRGWTYIWLQND--------Q 372 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L+ +R + + Y + +A Y+K G+Y AA+ + Sbjct: 373 AALEDFNRAIRLNPS--YS------IAYAHQGMA---------YIKLGKYQAALESSKQA 415 Query: 217 LANYSDAEH 225 + + + Sbjct: 416 IRLDPNNSY 424 >gi|39997085|ref|NP_953036.1| TPR domain protein [Geobacter sulfurreducens PCA] gi|39983975|gb|AAR35363.1| TPR domain protein [Geobacter sulfurreducens PCA] Length = 864 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 75/230 (32%), Gaps = 44/230 (19%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D +Q Y+ A + + +A + + + + P +L A + S K Q Sbjct: 23 DQNFQDARYQLAKAYQALGKYEQAEKEYLKVLKQNPS---KTDIVLELAKLYNSQRKPDQ 79 Query: 113 AASLGEEYITQYPESKNV------DYVYYLVGM---SYAQMIRDVPYDQRATKLMLQYMS 163 A +Y+ P S Y L GM + + + + R T LQ Sbjct: 80 AVEQAGKYLQSNPGSAEALEVLGLGYA--LKGMPAEAERNFLLALEKEPRRTSAKLQLAV 137 Query: 164 RIVERYTNSPYVKGARFYVTVG----------RNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 ++E+ S K AR + N LA+ E+ +G R Sbjct: 138 LLMEQ--KSSREKEARALIDEILTADPGNVKAHNLLASYELSLG-------------NR- 181 Query: 214 QLVLANYSD----AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + L Y + R + MD+A + + +++PQ Sbjct: 182 EQALEIYRKVAALTPGDPAPLYRQGVILLEKGEMDKAEKTAETLVQKFPQ 231 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 59/189 (31%), Gaps = 35/189 (18%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +Y + V+ L++ KA + + FP + + L Y Y A + Sbjct: 199 PAPLYRQGVILLEKGEMDKAEKTAETLVQKFP--QKSEGARLKGLIA-YQRKNYADAITA 255 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + + P + Y +G+S + L RI++ + Sbjct: 256 LQTSVKIAPSLEG----LYYLGLSMYSR--------GELENALSQFRRILDHTPDF---- 299 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 + + L K + + +A R + D+ A A L A Sbjct: 300 -VQARLLTALILLNQK---------RVDDAIAEANRA---IET--DSRSAL-ARNILGSA 343 Query: 237 YVALALMDE 245 Y+A + DE Sbjct: 344 YLAKGMYDE 352 >gi|226532194|ref|NP_001148950.1| peptidyl-prolyl isomerase PASTICCINO1 [Zea mays] gi|195623564|gb|ACG33612.1| peptidyl-prolyl isomerase PASTICCINO1 [Zea mays] Length = 631 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 47/152 (30%), Gaps = 27/152 (17%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF----P--------FAGVARKSL-LMSA 101 ++ KE F A +++ R++ P FA +R SL L A Sbjct: 402 DEADKIKNTGNRLFKEGKFELAKAKYDKVLREYNHVHPHDDEEGKIFAN-SRSSLHLNVA 460 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F G+Y+++ + + P Y G S+ + Sbjct: 461 FCYQKMGEYRKSIETCNKVLDANPVHVK---ALYRRGTSFMLL--------GDFNDARND 509 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 +++ +S + A + + + E Sbjct: 510 FEKMITIDKSSE--QDATAALLKLKQKEQEAE 539 >gi|15606474|ref|NP_213854.1| hypothetical protein aq_1247 [Aquifex aeolicus VF5] gi|2983687|gb|AAC07252.1| putative protein [Aquifex aeolicus VF5] Length = 217 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 29/148 (19%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 K+ +A Y + +A E+I +YP SK D Y+ +G ++ ++ Sbjct: 91 EKAEYENALELYKMKQLNEARDAFVEFIKKYPNSKYTDNAYFWLGKTFYEL--------G 142 Query: 154 ATKLMLQYMSRIVER-----YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 T+ Q + ++++ + + F + L +E Sbjct: 143 NTERAKQIFNVLIKKCKSGELPDCNKLPDTYFMLVKI--SLDEGNIEEA----------- 189 Query: 209 AIPRFQLVL-ANYSDAEHAEEAMARLVE 235 R+ +L + DAE + A + + Sbjct: 190 --NRYLSILEEKFPDAEATQRAKELIYK 215 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 44/119 (36%), Gaps = 19/119 (15%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 +++Y NS Y A F++ G+ + + G A F ++ Sbjct: 109 EARDAFVEFIKKYPNSKYTDNAYFWL--------------GKTFYELGNTERAKQIFNVL 154 Query: 217 LAN-----YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + D + LV+ + ++EA +S+++E++P + + L+ Sbjct: 155 IKKCKSGELPDCNKLPDTYFMLVKISLDEGNIEEANRYLSILEEKFPDAEATQRAKELI 213 Score = 35.5 bits (81), Expect = 9.3, Method: Composition-based stats. Identities = 9/64 (14%), Positives = 27/64 (42%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 K + A F + Y ++++ + A L + + L + A+++ +++ ++ G Sbjct: 102 YKMKQLNEARDAFVEFIKKYPNSKYTDNAYFWLGKTFYELGNTERAKQIFNVLIKKCKSG 161 Query: 261 YWAR 264 Sbjct: 162 ELPD 165 >gi|298491870|ref|YP_003722047.1| TPR repeat-containing protein ['Nostoc azollae' 0708] gi|298233788|gb|ADI64924.1| TPR repeat-containing protein ['Nostoc azollae' 0708] Length = 227 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 82/253 (32%), Gaps = 42/253 (16%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 Y+ F +T+ ++ + L + + +E+ E+ + +++ Sbjct: 1 MYKQTSFLVTVLLLGSLVTTTPLVAVGAE--VLVAQASNQRLKELLEEGRRLVDAGDYNG 58 Query: 76 AYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A + + + P R + + ++ +Q A + IT P + + Y Sbjct: 59 AIAVYQEAGKLDP-----RNAKIYSGIGYLYAQQSNFQLALAAYGRAITIDPNNSDFYYA 113 Query: 134 Y-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 Y+ G + T + R ++ N+ A + V + L Sbjct: 114 VGYIKGNT------------GDTPGAKEAYRRAIQLNRNN---VNAYLGLGVTQTTLGDY 158 Query: 193 EVEIGRYYLKRGEYVAAIP-------RFQLVLANYSDAEHAEEAMARLVEA---YVALAL 242 E Y AI ++L+ + + +EA L +A Y + Sbjct: 159 ESA-------MWAYEQAINLNRNNPRTYELMGSMFKQRRQTQEASNILRKALNLYRSSND 211 Query: 243 MDEAREVVSLIQE 255 + V +L++E Sbjct: 212 PEGIDRVEALLRE 224 >gi|37572247|gb|AAH30776.2| Intraflagellar transport 88 homolog (Chlamydomonas) [Homo sapiens] Length = 833 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 437 QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 496 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 497 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 549 Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157 ++ + +N V Y + Y Q++ +P D + Sbjct: 550 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDRGG 609 Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196 QY + ++ + + A Y + + ++ + Sbjct: 610 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 669 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + + G Y A+ ++ + + E + LV L L D A+E ++ Sbjct: 670 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 724 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KAV +L+++++++A E + + V + + + Y + QA+S Sbjct: 429 NKAVTYLRQKDYNQAVEILKVLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 486 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 487 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 542 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y Sbjct: 543 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 578 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AI V++ +++L E Y +A + Sbjct: 579 QAIEWLMQVVSVIPTDPQV---LSKLGELYDRGGDKSQAFQY 617 >gi|188996580|ref|YP_001930831.1| tol-pal system protein YbgF [Sulfurihydrogenibium sp. YO3AOP1] gi|188931647|gb|ACD66277.1| tol-pal system protein YbgF [Sulfurihydrogenibium sp. YO3AOP1] Length = 232 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 63/154 (40%), Gaps = 25/154 (16%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + + V + +++Y+ A+ + N ++ + F + + +P + + ++ + Sbjct: 93 KKEGKEEVAVPQNDKQLYQYALDLYFKGNIEESRKAFTEFLKKYPDSDLYGNAIFWAGQT 152 Query: 104 QYSAGKYQQAASLGEEYITQ-----------YPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 Y+ KY+ A + E ++ + YP+ +G SY ++ + Sbjct: 153 FYAEKKYKDAIDIWEIFLKKCDEGKIKKCNKYPD------AMLKLGYSYIELGNE----- 201 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + QY+ ++++Y +S A+ + V + Sbjct: 202 ---EKGKQYLQDLIKKYPDSEPASLAKKKLEVLK 232 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 15/114 (13%), Positives = 40/114 (35%), Gaps = 19/114 (16%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + + + +++Y +S A G+ + +Y AI Sbjct: 120 GNIEESRKAFTEFLKKYPDSDLYGNAI--------------FWAGQTFYAEKKYKDAIDI 165 Query: 213 FQLVLAN-----YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 +++ L +AM +L +Y+ L ++ ++ + + ++YP Sbjct: 166 WEIFLKKCDEGKIKKCNKYPDAMLKLGYSYIELGNEEKGKQYLQDLIKKYPDSE 219 >gi|15618578|ref|NP_224864.1| hypothetical protein CPn0668 [Chlamydophila pneumoniae CWL029] gi|15836200|ref|NP_300724.1| hypothetical protein CPj0668 [Chlamydophila pneumoniae J138] gi|33242025|ref|NP_876966.1| hypothetical protein CpB0694 [Chlamydophila pneumoniae TW-183] gi|4376968|gb|AAD18807.1| CT547 hypothetical protein [Chlamydophila pneumoniae CWL029] gi|8979040|dbj|BAA98875.1| CT547 hypothetical protein [Chlamydophila pneumoniae J138] gi|33236535|gb|AAP98623.1| hypothetical protein CpB0694 [Chlamydophila pneumoniae TW-183] Length = 318 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 53/150 (35%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A +++ FP + ++L A + +A ++ Q+P Sbjct: 151 EDALRIYDEILTAFPSKDLGAQALYSKAALLIVKNDLTEATKTLKKLTLQFPLHILSSEA 210 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + + Y Q + P++ + + +++ N P + V R A Sbjct: 211 FVRLSEIYLQQAKKEPHNLQYLHFAKLNEEAMKKQHPNHPLNEVVSANVGAMREHYARGL 270 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 GR+Y K+ + AA ++ + NY D Sbjct: 271 YATGRFYEKKKKAEAANIYYRTAITNYPDT 300 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 34/228 (14%), Positives = 72/228 (31%), Gaps = 45/228 (19%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 E + + FLK+ NF KA F + FP + ++ + ++ A Sbjct: 42 SAEEYFSQGQEFLKKGNFRKALLCFGIITHHFPRDILRNQAQYLIGVCYFTQDHPDLADK 101 Query: 116 LGEEYITQYPESKNVDY------VYYLVGMSYAQ-------MIRDVPYDQRATKLMLQYM 162 Y+ + +Y + Y + +AQ + P A + L+ Sbjct: 102 AFASYLQL----PDAEYSEELFQMKYAIAQRFAQGKRKRICRLEGFPKLMNADEDALRIY 157 Query: 163 SRIVERYTNSPYVKGA---RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 I+ + + A + + + +N L A + + Sbjct: 158 DEILTAFPSKDLGAQALYSKAALLIVKNDLTE-----------------ATKTLKKLTLQ 200 Query: 220 YSDAEHAEEAMARLVEAYVA--------LALMDEAREVVSLIQERYPQ 259 + + EA RL E Y+ L + A+ +++++P Sbjct: 201 FPLHILSSEAFVRLSEIYLQQAKKEPHNLQYLHFAKLNEEAMKKQHPN 248 >gi|300869589|ref|ZP_07114170.1| TPR repeat-containing serine/threonin protein kinase [Oscillatoria sp. PCC 6506] gi|300332457|emb|CBN59370.1| TPR repeat-containing serine/threonin protein kinase [Oscillatoria sp. PCC 6506] Length = 735 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 11/121 (9%), Positives = 37/121 (30%), Gaps = 20/121 (16%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + + Y++A +N+ A + ++ K+ ++ Sbjct: 369 NPQSAEVFYKRANANYDLKNYEAAIADYTQAIALDPNY------VKAYFNRGLTRFEIKD 422 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + P + YY G++Y + + ++ ++++ Sbjct: 423 LRGAIEDYTQLLKLQPNDPD---AYYERGLAYFGLQDYP--------VAIKDFTQVIRLQ 471 Query: 170 T 170 Sbjct: 472 P 472 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 67/200 (33%), Gaps = 42/200 (21%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + L + A LV +R + +E +++ V + + + A F Sbjct: 310 RLWLVLLGIGAAIALVCLLIFFNR-------PNPVKAKEYFDRGVEKSQVGDAAGAIAAF 362 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVG 138 N+ + P + + A Y Y+ A + + I P Y Y+ G Sbjct: 363 NKSIQLNPQSA---EVFYKRANANYDLKNYEAAIADYTQAIALDPN-----YVKAYFNRG 414 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 ++ + I+D+ + ++ +++++ N P A E + Sbjct: 415 LTRFE-IKDL-------RGAIEDYTQLLKLQPNDPD---------------AYYERGLA- 450 Query: 199 YYLKRGEYVAAIPRFQLVLA 218 Y +Y AI F V+ Sbjct: 451 -YFGLQDYPVAIKDFTQVIR 469 Score = 35.5 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 9/74 (12%), Positives = 22/74 (29%), Gaps = 8/74 (10%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + + + A + P + + ++ + Y Y+ A + + Sbjct: 616 NRGLAHSAAGDREGAVADYTAAIGLNPNDYEAYSNRAKI-----HYDLKNYEDALADYVQ 670 Query: 120 YITQYPESKNVDYV 133 I P + YV Sbjct: 671 AIRLNP-NFAAAYV 683 >gi|260575510|ref|ZP_05843509.1| TPR repeat-containing protein [Rhodobacter sp. SW2] gi|259022430|gb|EEW25727.1| TPR repeat-containing protein [Rhodobacter sp. SW2] Length = 199 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 7/70 (10%), Positives = 22/70 (31%), Gaps = 7/70 (10%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR--KSLLMSAFVQYSAGKYQQAASLG 117 + E+ +++ ++ A ++ + P A + A + G + Sbjct: 82 LLERGRKAMEQGDYEVAIQHLTALTDHAP--EFAEGWNA---LATAYFQNGDLGPSIEDI 136 Query: 118 EEYITQYPES 127 + + P Sbjct: 137 QRTLALNPRH 146 >gi|109120148|ref|XP_001086373.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2 [Macaca mulatta] gi|109120152|ref|XP_001086485.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 3 [Macaca mulatta] Length = 824 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 36/299 (12%), Positives = 88/299 (29%), Gaps = 56/299 (18%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 428 QKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 487 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 488 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 540 Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157 ++ + +N V Y + Y Q++ VP D + Sbjct: 541 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVVPTDPQVLSKLGELYDHEG 600 Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196 QY + ++ + + A Y + + ++ + Sbjct: 601 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 660 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + + G Y A+ ++ + + E + LV L L D A+E ++ Sbjct: 661 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 715 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KAV +L+++++++A E + + V + + + Y + QA+S Sbjct: 420 NKAVTYLRQKDYNQAVEILKMLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 477 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 478 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 533 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y Sbjct: 534 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 569 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AI V++ +++L E Y +A + Sbjct: 570 QAIEWLMQVVSVVPTDPQV---LSKLGELYDHEGDKSQAFQY 608 >gi|254410994|ref|ZP_05024772.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196182349|gb|EDX77335.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 407 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 46/147 (31%), Gaps = 30/147 (20%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +Y A + ++ I P NV +Y G+ ++ R K + ++ Sbjct: 259 ENRQYDAAIAAYDKAIKLNP---NVYQAWYNRGLCLTELHR--------FKEAIASYQKL 307 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA-- 223 ++ + N L G + +Y AI + L + Sbjct: 308 IQLNPDFERAW----------NSL-------GNAFYHSQQYTEAITAYDHALQLEPNLAD 350 Query: 224 EHAEEAMARLVEAYVALALMDEAREVV 250 A R ++ YV LA+ + + Sbjct: 351 TWYNRACCRALQGYVELAIDSLKQAIA 377 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 15/144 (10%), Positives = 52/144 (36%), Gaps = 18/144 (12%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 ++ VCFL + + D+++ +++ L+ + + A +++ + Sbjct: 222 LALIVCFLGFVWLIKQKGNQTPNAADLQW----FDQGNKLLENRQYDAAIAAYDKAIKLN 277 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 P ++ ++++A + ++ I P+ + + +G ++ Sbjct: 278 P-NVY--QAWYNRGLCLTELHRFKEAIASYQKLIQLNPDFER---AWNSLGNAFY----- 326 Query: 148 VPYDQRATKLMLQYMSRIVERYTN 171 + Q+ T + ++ N Sbjct: 327 --HSQQYT-EAITAYDHALQLEPN 347 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 39/128 (30%), Gaps = 16/128 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y + + + F +A + + + P F ++ Y + +Y +A + + Sbjct: 285 YNRGLCLTELHRFKEAIASYQKLIQLNPDF----ERAWNSLGNAFYHSQQYTEAITAYDH 340 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P N+ +Y A Q +L + + + + N Sbjct: 341 ALQLEP---NLADTWYNRACCRAL--------QGYVELAIDSLKQAIAVNPNLREQAKTD 389 Query: 180 FYVTVGRN 187 RN Sbjct: 390 ADFESIRN 397 >gi|257060748|ref|YP_003138636.1| hypotheticalprotein [Cyanothece sp. PCC 8802] gi|256590914|gb|ACV01801.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802] Length = 270 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 49/288 (17%), Positives = 99/288 (34%), Gaps = 70/288 (24%) Query: 24 LTIFFSIAVCFLVGWERQSS---RDVYLDSVTDVRYQR--EVYEKAVLFLKEQNFSKAYE 78 + +F ++ +G+ + +D + S+T+ + Q+ E+ +KA+ ++ NFS+A Sbjct: 2 IRLFVTLLTILWLGFATIPTALAQDTSILSITEEQLQQGEEIAKKAIEATEKGNFSQAEA 61 Query: 79 YFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY---- 132 Y++Q FP + + + S K +A + + IT P + Y Sbjct: 62 YWSQLIEQFPSNPAVWSNR-----GNSRVSQNKLDEAIADFNQAITLAPNEPD-PYLNRG 115 Query: 133 -VY-----YLVGMSYAQMIRDVPYDQRAT----------------KLMLQYMSRIVERYT 170 Y ++ + + D + L+ + VE Sbjct: 116 AALEGQGKYQEAITDYNHV--LELDPHDAMAYNNRGNAEGGLGQWEKALEDYQKAVEIQP 173 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 N + K LA+ ++ G A+ + + ++ Y A+ Sbjct: 174 NFAFAK--------ANVALASYQL---------GNTQEALNQMRKIVRKYPMFPDMRAAL 216 Query: 231 -ARLVEAYVALALMDEARE--VVSL-IQERYPQGYW----ARYVETLV 270 A L E L EA V ++ + RY W R+ +V Sbjct: 217 TAVLWE----LGQQGEAESNWVAAVGMDNRYQDLEWVSHIRRWPPEMV 260 >gi|157149134|ref|YP_001456453.1| cellulose synthase subunit BcsC [Citrobacter koseri ATCC BAA-895] gi|157086339|gb|ABV16017.1| hypothetical protein CKO_04973 [Citrobacter koseri ATCC BAA-895] Length = 1194 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 39/232 (16%), Positives = 81/232 (34%), Gaps = 28/232 (12%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 S + +D + + ++A + N+++A E + P + Sbjct: 477 SLSSRQRQSIDDIERSLENDRLAQQAEALENQGNWAQAAELHRRRLALDPGSVW---VTY 533 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGM----SYAQMIRDVPYDQ 152 + ++AG+ QA + Q P + Y Y YL G + I ++P Q Sbjct: 534 RLSRDLWNAGQRSQADAHMRALARQKPNDPDQVYAYGLYLAGNDQDRAAMAHINNLPRSQ 593 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGRYYL 201 + + +R N+ ++ A G+ + A ++ + + Sbjct: 594 WN-----SNIQELADRLQNNQVLETASRLRDSGKEREAETLLRQQPASTRIDLTLADWAQ 648 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +R +Y +A + VLA +A L E Y+A AR ++ + Sbjct: 649 QRRDYSSARAAYDAVLAREPG---NVDARLGLTEVYIAQGDNAAARAELAKL 697 >gi|325109980|ref|YP_004271048.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] gi|324970248|gb|ADY61026.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] Length = 482 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 15/123 (12%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 ++D +Y++ + L++ + F P + + A A Sbjct: 152 EMSDADKANMLYQRGLAKLQQDDTIDGGVADFKAAVALQPKHMASLTA---LADAYAMAE 208 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + + A + ++I YPE + Y GM + QM T+ LQ + VE Sbjct: 209 QNENALAAFNQFIAAYPEHP-IGY--NNRGMFHKQMDD--------TQAALQDFQKAVEL 257 Query: 169 YTN 171 Sbjct: 258 QPK 260 >gi|257457860|ref|ZP_05623019.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC 35580] gi|257444573|gb|EEV19657.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC 35580] Length = 300 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 64/191 (33%), Gaps = 24/191 (12%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF------------ 67 K L F ++C L + S +D + +E+A+ Sbjct: 3 KKTVLAYFLCFSICSLFADSSDLLTGLDAYSRSDWNAAVQSFERALTAAPDDRTEALYWL 62 Query: 68 ----LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 QN+ +A Y + + A + + + +G Y+ ++ + ++I Sbjct: 63 VMSETSAQNYQRALYYADAFLENASEDERAAEVSYQKGRLLHLSGDYETSSKILYQFIED 122 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 YPE V YY +G + + S IV Y S V AR+ + Sbjct: 123 YPEHPKVPSAYYWIGENLYAA--------GNYTEARKVFSGIVADYPQSGKVNEARYKIV 174 Query: 184 VGRNQLAAKEV 194 + Q +E+ Sbjct: 175 LIDQQSVREEL 185 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 58/172 (33%), Gaps = 24/172 (13%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + +++ A + F + P ++L + SA YQ+A + ++ Sbjct: 27 TGLDAYSRSDWNAAVQSFERALTAAP--DDRTEALYWLVMSETSAQNYQRALYYADAFLE 84 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 E + V Y G + + + + + + +E Y P V A +++ Sbjct: 85 NASEDERAAEVSYQKG--------RLLHLSGDYETSSKILYQFIEDYPEHPKVPSAYYWI 136 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 + G Y A F ++A+Y + EA ++V Sbjct: 137 GE--------NLYAA------GNYTEARKVFSGIVADYPQSGKVNEARYKIV 174 >gi|162454729|ref|YP_001617096.1| hypothetical protein sce6447 [Sorangium cellulosum 'So ce 56'] gi|161165311|emb|CAN96616.1| hypothetical protein sce6447 [Sorangium cellulosum 'So ce 56'] Length = 947 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 84/256 (32%), Gaps = 37/256 (14%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 C + V + + + A ++ + F KA + + D P Sbjct: 8 GCRRGARATPCCPQQEIPIAVAVDRDKVL-QTAQKLVERKRFDKAIAEYQKLVADDP--- 63 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 ++LL + +Y +A + E Y L ++ + IR++ + Sbjct: 64 KDVRTLLKIGDLYLKTEEYVEAITTYERVGQFYSLQGFA-----LKAIAVYKQIREIIH- 117 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + IV P + + + + LAA + E+ L+ G AI Sbjct: 118 -KHVPQYEDRFGHIV------PRLAEIYTQLGLTSDALAAYD-EVATRLLRAGRDRDAID 169 Query: 212 RFQLVLANYSDAEHAE----EAMARLVEAYVA--------------LALMDEAREVVSLI 253 F+ V+ + A EA+ R V Y A L D+A +VV + Sbjct: 170 IFKRVVDLDPNNPLAYLRLAEALIR-VRDYDAAIQRFGTAAELLLKLGRRDDALKVVERL 228 Query: 254 QERYPQGYWARYVETL 269 + P +AR + Sbjct: 229 LQHRPDARFARMAAEI 244 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 57/192 (29%), Gaps = 47/192 (24%) Query: 61 YEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y++ A L+ A + F + P +A L A Y A + Sbjct: 151 YDEVATRLLRAGRDRDAIDIFKRVVDLDPNNPLA---YLRLAEALIRVRDYDAAI---QR 204 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + G + +++ D L+ + R+++ ++ + + A Sbjct: 205 F-----------------GTAAELLLKLGRRD-----DALKVVERLLQHRPDARFARMA- 241 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 YL RG+ + + + + E +A L A+ Sbjct: 242 -----------------AEIYLDRGDPSDGMSALTKLQIAFKENPKDLETLALLARAFDL 284 Query: 240 LALMDEAREVVS 251 L +A EV Sbjct: 285 LGQPAKAIEVQK 296 >gi|317011474|gb|ADU85221.1| paralysed flagella protein [Helicobacter pylori SouthAfrica7] Length = 803 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 189 PLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGKLG 248 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP N+ Y V + + K +++ RI+ Sbjct: 249 IKKTLLIDIGTKWIKNYPADPNIPEALYYVAKALNEN--------NNYKQAMRFYKRILL 300 Query: 168 RYTNSPYVKGARFYVTV 184 Y NS Y A+ ++ + Sbjct: 301 EYKNSRYAPLAQMHLAI 317 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 11/99 (11%), Positives = 30/99 (30%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + D +Y Sbjct: 218 RTISRAFKNYPQTIFKKDLYLLEIIALGKLGIKKTLLIDIGTKWIKNYPADPNIPEALYY 277 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A ++ + ++ + A + + A Sbjct: 278 VAKALNENNNYKQAMRFYKRILLEYKNSRYAPLAQMHLA 316 >gi|284007878|emb|CBA73799.1| conserved hypothetical protein [Arsenophonus nasoniae] Length = 253 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 43/124 (34%), Gaps = 22/124 (17%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 QA S + +I YP+S Y +G Q Y + +V+ Y Sbjct: 150 AQAISSFQHFIKTYPKSNLQPNANYWLGQLNYN--------QGNKDDAAFYFATVVKNYP 201 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 NSP + + V + ++G+ A +Q V+ Y + A+ A Sbjct: 202 NSPKGAESLYKVGLLMQ--------------EKGQSDKARVVYQQVIKAYPGSPSAQLAE 247 Query: 231 ARLV 234 +L Sbjct: 248 KKLA 251 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 52/168 (30%), Gaps = 31/168 (18%) Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + A + + P S+ DY V ++ I+ Q A + Sbjct: 110 ANADSNNSSNAVTTAK------PASEKADYDTA---VALA----IKSKSKQQIA--QAIS 154 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 ++ Y S A +++ +G A F V+ NY Sbjct: 155 SFQHFIKTYPKSNLQPNANYWLGQLN--------------YNQGNKDDAAFYFATVVKNY 200 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 ++ E++ ++ D+AR V + + YP A+ E Sbjct: 201 PNSPKGAESLYKVGLLMQEKGQSDKARVVYQQVIKAYPGSPSAQLAEK 248 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 8/111 (7%) Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 +A F + +P + + + + Y+ G AA + YP S Sbjct: 151 QAISSFQHFIKTYPKSNLQPNANYWLGQLNYNQGNKDDAAFYFATVVKNYPNSPKGAESL 210 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 Y VG+ + ++ + ++++ Y SP + A + Sbjct: 211 YKVGL--------LMQEKGQSDKARVVYQQVIKAYPGSPSAQLAEKKLASL 253 Score = 40.1 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y L + N A YF +++P + +SL + G+ +A + ++ Sbjct: 174 YWLGQLNYNQGNKDDAAFYFATVVKNYPNSPKGAESLYKVGLLMQEKGQSDKARVVYQQV 233 Query: 121 ITQYPESKNV 130 I YP S + Sbjct: 234 IKAYPGSPSA 243 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 2/63 (3%) Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 AI FQ + Y + A L + D+A + + + YP + E+ Sbjct: 152 AISSFQHFIKTYPKSNLQPNANYWLGQLNYNQGNKDDAAFYFATVVKNYPNS--PKGAES 209 Query: 269 LVK 271 L K Sbjct: 210 LYK 212 >gi|29169140|gb|AAO66314.1| hypothetical adventurous gliding motility protein U [Myxococcus xanthus] Length = 1219 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 57/161 (35%), Gaps = 29/161 (18%) Query: 94 RKSLLMSAFVQYSAGKY-QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 +++ A +Y + A + + +YP + D V + +G + +D Sbjct: 164 QRAKAEKAEFSAKQKEYGKLAVEQYTKIVQEYPNFERTDEVLFFLGQYLMEDGQD----- 218 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL-----KRGEYV 207 + L R+VE++ S ++ A G YY KR E Sbjct: 219 ---RKALVAFKRLVEKHPQSKFIPDAY--------------FAFGEYYFNNSKGKRPELE 261 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 A+ ++ + +++ A+ + + + + A++ Sbjct: 262 KALVAYKKAAE-FPESQVYAFALYKQGWCHYNMGDFESAKD 301 Score = 42.8 bits (100), Expect = 0.056, Method: Composition-based stats. Identities = 31/229 (13%), Positives = 74/229 (32%), Gaps = 32/229 (13%) Query: 45 DVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARKSLL 98 + YL V + E+ ++ A ++ + +F +A F++ + +P A + Sbjct: 608 ERYLKYVPKGEKRVEIAFKAANIYYRHNHFDEAVLRFSEIALGYPEYKFENGERAAEISA 667 Query: 99 MSA-FVQYSAGKYQQAASLGEEYITQYPESKNV------DYVYYLVGMSYAQMIRDVPYD 151 + Y + + Y K D L+ S +++ + + Sbjct: 668 NLILDSYHLLQDYAKVNEWARRF---YANDKLAVGKFRDDLAK-LIEQSSFKLVSQLE-E 722 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 ++ + + V+ + + LA + Y K AI Sbjct: 723 KKEFEKAAEAYLAFVKDFPQTEIAD------------LALYNASVD--YYKAKRLDKAIE 768 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + A Y ++H +++ EA A+ ++A Y + Sbjct: 769 VRKRLFAEYPRSKHVPDSIYANAEALEAIGDFEDAAATYEAYVRGYERS 817 Score = 35.9 bits (82), Expect = 6.8, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 29/72 (40%), Gaps = 1/72 (1%) Query: 197 GRYYLKRGEYVA-AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + K+ EY A+ ++ ++ Y + E +E + L + + +A + E Sbjct: 171 AEFSAKQKEYGKLAVEQYTKIVQEYPNFERTDEVLFFLGQYLMEDGQDRKALVAFKRLVE 230 Query: 256 RYPQGYWARYVE 267 ++PQ + Sbjct: 231 KHPQSKFIPDAY 242 Score = 35.5 bits (81), Expect = 7.4, Method: Composition-based stats. Identities = 12/105 (11%), Positives = 34/105 (32%), Gaps = 6/105 (5%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + R ++ +++ KA F + P + + Sbjct: 190 KIVQEYPNFERTDEVLFFLGQYLMEDGQDRKALVAFKRLVEKHPQSKFIPDAYFAFGEYY 249 Query: 105 YSAG-----KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 ++ + ++A ++ ++PES+ + Y G + M Sbjct: 250 FNNSKGKRPELEKALVAYKK-AAEFPESQVYAFALYKQGWCHYNM 293 >gi|326201788|ref|ZP_08191659.1| tetratricopeptide TPR_2 [Clostridium papyrosolvens DSM 2782] gi|325988388|gb|EGD49213.1| tetratricopeptide TPR_2 [Clostridium papyrosolvens DSM 2782] Length = 371 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 16/121 (13%), Positives = 38/121 (31%), Gaps = 6/121 (4%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 Y YK+ +A+ + + + ++ + ++ + + Sbjct: 246 LYGQYKYVEAADMLLALPAKDLSAENKKKYDSIKANILNSAANQLTTEGNSLFNKKKYKE 305 Query: 76 AYEYFNQCS---RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 A + + +PF K+L + + + Q+ A + I YP S Y Sbjct: 306 AIQKLEKVFTYGAKWPFGD---KALYVLGKSYVANNEPQKGAETYNKLINDYPASTYSRY 362 Query: 133 V 133 Sbjct: 363 A 363 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 33/71 (46%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + +Y AI + + V + ++A+ L ++YVA + E + + YP Sbjct: 298 FNKKKYKEAIQKLEKVFTYGAKWPFGDKALYVLGKSYVANNEPQKGAETYNKLINDYPAS 357 Query: 261 YWARYVETLVK 271 ++RY ++ ++ Sbjct: 358 TYSRYAKSRLE 368 >gi|88604422|ref|YP_504600.1| TPR repeat-containing protein [Methanospirillum hungatei JF-1] gi|88189884|gb|ABD42881.1| TPR repeat [Methanospirillum hungatei JF-1] Length = 565 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 38/123 (30%), Gaps = 14/123 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D Y + V + + A F++ P A + G+ + Sbjct: 388 DPMNPEAWYYRGVTQYELGRYQDALCSFDKTILLDPGNAWA---YYYRGDILQKGGQCEY 444 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A + + I P + + YY+ G Y R +L R ++++ + Sbjct: 445 AIAYLNKGIQLDPT---IPWTYYVKGNCYLNQSR--------YQLAADEFDRSIDQFPCN 493 Query: 173 PYV 175 + Sbjct: 494 RWA 496 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 22/74 (29%), Gaps = 3/74 (4%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 G Y + G Y AI Q L A + AY L AR Sbjct: 192 YFTGTTYTELGNYAQAIDALQSALTL---DPSNAGAYYEMGRAYEKLGNRTAARNYYETA 248 Query: 254 QERYPQGYWARYVE 267 + P W R+V Sbjct: 249 IKLNPDNVWTRFVY 262 >gi|172037655|ref|YP_001804156.1| hypothetical protein cce_2742 [Cyanothece sp. ATCC 51142] gi|171699109|gb|ACB52090.1| unknown [Cyanothece sp. ATCC 51142] Length = 270 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 35/281 (12%), Positives = 78/281 (27%), Gaps = 66/281 (23%) Query: 19 LYKFALTIFFSIAV-CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + + L++ + + + +++ V+ + +KA+ + +F +A Sbjct: 1 MIRCILSVLIILVLWAGVTPIGLAQTQENPTIIEEKVQQGEAIAQKAIEATENGDFGQAE 60 Query: 78 EYFNQCSRDFPFAG--VAR-------KSLLMSAFVQYS---------------------- 106 Y+ + FP + ++ L +A ++ Sbjct: 61 AYWTELVEAFPSNPAVWSNRGNARVSQNKLEAAIADFNEAIKLAPDAPDPYLNRGTALEG 120 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 G Y+ A + + P M+Y + Q L + V Sbjct: 121 QGNYEAAIADYNRVLELNPND----------AMAYNNR-GNAESGQGDWDKALTDYQKAV 169 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 E N + + V Y + G AI + ++ Y Sbjct: 170 EIAPNFAFARANAALV-----------------YYQIGNQGEAITEMRNLVRKYPMFPDM 212 Query: 227 EEAMARLVEAYVALALMDEARE--VVSL-IQERYPQGYWAR 264 A+ + EA V ++ + RY W + Sbjct: 213 RAAL---TAVLWNMGQQGEAESHWVAAVGMDNRYQDLNWVK 250 >gi|157927998|gb|ABW03295.1| intraflagellar transport 88 homolog (Chlamydomonas) [synthetic construct] gi|157928711|gb|ABW03641.1| intraflagellar transport 88 homolog (Chlamydomonas) [synthetic construct] Length = 824 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 428 QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 487 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 488 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 540 Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157 ++ + +N V Y + Y Q++ +P D + Sbjct: 541 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDRGG 600 Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196 QY + ++ + + A Y + + ++ + Sbjct: 601 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 660 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + + G Y A+ ++ + + E + LV L L D A+E ++ Sbjct: 661 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 715 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KAV +L+++++++A E + + V + + + Y + QA+S Sbjct: 420 NKAVTYLRQKDYNQAVEILKVLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 477 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 478 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 533 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y Sbjct: 534 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 569 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AI V++ +++L E Y +A + Sbjct: 570 QAIEWLMQVVSVIPTDPQV---LSKLGELYDRGGDKSQAFQY 608 >gi|153840013|ref|ZP_01992680.1| lipoprotein, ComL family [Vibrio parahaemolyticus AQ3810] gi|149746444|gb|EDM57459.1| lipoprotein, ComL family [Vibrio parahaemolyticus AQ3810] Length = 66 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 7/56 (12%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 T+ +AV L G S++ + V E+Y A + L+ N+ A E Sbjct: 5 TLTGLLAVSLLFGCA---SKEEIVPDVP----PSELYADAQVSLQSGNWLSAIEKL 53 >gi|108760059|ref|YP_633028.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622] gi|108463939|gb|ABF89124.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622] Length = 1218 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 57/161 (35%), Gaps = 29/161 (18%) Query: 94 RKSLLMSAFVQYSAGKY-QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 +++ A +Y + A + + +YP + D V + +G + +D Sbjct: 164 QRAKAEKAEFSAKQKEYGKLAVEQYTKIVQEYPNFERTDEVLFFLGQYLMEDGQD----- 218 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL-----KRGEYV 207 + L R+VE++ S ++ A G YY KR E Sbjct: 219 ---RKALVAFKRLVEKHPQSKFIPDAY--------------FAFGEYYFNNSKGKRPELE 261 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 A+ ++ + +++ A+ + + + + A++ Sbjct: 262 KALVAYKKAAE-FPESQVYAFALYKQGWCHYNMGDFESAKD 301 Score = 42.8 bits (100), Expect = 0.057, Method: Composition-based stats. Identities = 31/229 (13%), Positives = 74/229 (32%), Gaps = 32/229 (13%) Query: 45 DVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARKSLL 98 + YL V + E+ ++ A ++ + +F +A F++ + +P A + Sbjct: 608 ERYLKYVPKGEKRVEIAFKAANIYYRHNHFDEAVLRFSEIALGYPEYKFENGERAAEISA 667 Query: 99 MSA-FVQYSAGKYQQAASLGEEYITQYPESKNV------DYVYYLVGMSYAQMIRDVPYD 151 + Y + + Y K D L+ S +++ + + Sbjct: 668 NLILDSYHLLQDYAKVNEWARRF---YANDKLAVGKFRDDLAK-LIEQSSFKLVSQLE-E 722 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 ++ + + V+ + + LA + Y K AI Sbjct: 723 KKEFEKAAEAYLAFVKDFPQTEIAD------------LALYNASVD--YYKAKRLDKAIE 768 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + A Y ++H +++ EA A+ ++A Y + Sbjct: 769 VRKRLFAEYPRSKHVPDSIYANAEALEAIGDFEDAAATYEAYVRGYERS 817 Score = 35.9 bits (82), Expect = 6.8, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 29/72 (40%), Gaps = 1/72 (1%) Query: 197 GRYYLKRGEYVA-AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + K+ EY A+ ++ ++ Y + E +E + L + + +A + E Sbjct: 171 AEFSAKQKEYGKLAVEQYTKIVQEYPNFERTDEVLFFLGQYLMEDGQDRKALVAFKRLVE 230 Query: 256 RYPQGYWARYVE 267 ++PQ + Sbjct: 231 KHPQSKFIPDAY 242 Score = 35.5 bits (81), Expect = 7.4, Method: Composition-based stats. Identities = 12/105 (11%), Positives = 34/105 (32%), Gaps = 6/105 (5%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + R ++ +++ KA F + P + + Sbjct: 190 KIVQEYPNFERTDEVLFFLGQYLMEDGQDRKALVAFKRLVEKHPQSKFIPDAYFAFGEYY 249 Query: 105 YSAG-----KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 ++ + ++A ++ ++PES+ + Y G + M Sbjct: 250 FNNSKGKRPELEKALVAYKK-AAEFPESQVYAFALYKQGWCHYNM 293 >gi|28558993|ref|NP_783195.2| intraflagellar transport protein 88 homolog isoform 1 [Homo sapiens] gi|206729873|sp|Q13099|IFT88_HUMAN RecName: Full=Intraflagellar transport protein 88 homolog; AltName: Full=Recessive polycystic kidney disease protein Tg737 homolog; AltName: Full=Tetratricopeptide repeat protein 10; Short=TPR repeat protein 10 gi|122889168|emb|CAH70874.2| intraflagellar transport 88 homolog (Chlamydomonas) [Homo sapiens] gi|123233608|emb|CAI14390.2| intraflagellar transport 88 homolog (Chlamydomonas) [Homo sapiens] Length = 833 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 437 QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 496 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 497 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 549 Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157 ++ + +N V Y + Y Q++ +P D + Sbjct: 550 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 609 Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196 QY + ++ + + A Y + + ++ + Sbjct: 610 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 669 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + + G Y A+ ++ + + E + LV L L D A+E ++ Sbjct: 670 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 724 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KAV +L+++++++A E + + V + + + Y + QA+S Sbjct: 429 NKAVTYLRQKDYNQAVEILKVLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 486 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 487 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 542 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y Sbjct: 543 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 578 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AI V++ +++L E Y +A + Sbjct: 579 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 617 >gi|119628674|gb|EAX08269.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_d [Homo sapiens] gi|119628678|gb|EAX08273.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_d [Homo sapiens] Length = 833 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 437 QKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 496 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 497 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 549 Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157 ++ + +N V Y + Y Q++ +P D + Sbjct: 550 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 609 Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196 QY + ++ + + A Y + + ++ + Sbjct: 610 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 669 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + + G Y A+ ++ + + E + LV L L D A+E ++ Sbjct: 670 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 724 Score = 35.5 bits (81), Expect = 7.4, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 65/222 (29%), Gaps = 67/222 (30%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KAV +L+++++++A E + V + + + Y + QA+S Sbjct: 429 NKAVTYLRQKDYNQAVEILKVLEKKD--NRVKSAAATNLSALYYMGKDFAQASSYADIAV 486 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 487 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 542 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y Sbjct: 543 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 578 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AI V++ +++L E Y +A + Sbjct: 579 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 617 >gi|110833621|ref|YP_692480.1| hypothetical protein ABO_0760 [Alcanivorax borkumensis SK2] gi|110646732|emb|CAL16208.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 254 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 45/155 (29%), Gaps = 24/155 (15%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 L + + + D R Y A L +FS A F +DFP Sbjct: 107 TLAERGSTAKEEAAVAGNNDPEADRAAYNAAKDKLVAGDFSGAIAGFEAYLKDFPQG--- 163 Query: 94 RKSLLMSAFVQY---------SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 L A + Q+A + YP+ Y++ + A Sbjct: 164 ----LSRADAHFWAGKLYSDQKEPDLQKAQGHFQAVADNYPDHSKASKSLYILAVMQANA 219 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + +++++Y +S K A+ Sbjct: 220 --------GEISPAKVNLHKLIKQYQDSREAKQAQ 246 >gi|66499186|ref|XP_395748.2| PREDICTED: FK506-binding protein 59 [Apis mellifera] Length = 459 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 15/144 (10%), Positives = 45/144 (31%), Gaps = 27/144 (18%) Query: 59 EVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR------------KSLLMSAFVQY 105 ++Y EK + K +S A + + + + + + L A Sbjct: 251 KMYKEKGTNYFKANKYSLAIKMYKKITSVLEYGEDFEGDLKIERNNLILSAHLNLALCYL 310 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +A E + P+++ + G +Y + + ++ ++ + Sbjct: 311 KLDNNVEAKDSCNEALKLSPQNEK---ALFRRGQAYLAL--------ASPEIAIKDFQEV 359 Query: 166 VERYTNSPYVKGARFYVTVGRNQL 189 ++ + A + + N + Sbjct: 360 LKVEPKN---TAAVKQIGICNNLI 380 >gi|126662914|ref|ZP_01733913.1| hypothetical protein FBBAL38_06145 [Flavobacteria bacterium BAL38] gi|126626293|gb|EAZ96982.1| hypothetical protein FBBAL38_06145 [Flavobacteria bacterium BAL38] Length = 593 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA-LALMDEAREVVSL 252 ++I Y ++ EY A+ +Q +L N+ D + +EA+ E Y L ++A+ + Sbjct: 507 LKIADIYFRKKEYQKALNYYQNILDNHKDGIYIDEALFFSAEIYRKYLLDNEKAKPLYEK 566 Query: 253 IQERYPQGYWA 263 + +P + Sbjct: 567 MVLEHPDSLYY 577 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 47/128 (36%), Gaps = 7/128 (5%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + Y KA L L ++ A + F + ++LL A + + +YQ+A + + Sbjct: 468 QAYAKADLQLYQKKNEDALQSFLTILEKHKGESIEDETLLKIADIYFRKKEYQKALNYYQ 527 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + + +D + Y + + D + ++V + +S Y + Sbjct: 528 NILDNHKDGIYIDEALFFSAEIYRKYLLDN-------EKAKPLYEKMVLEHPDSLYYTES 580 Query: 179 RFYVTVGR 186 R R Sbjct: 581 RKQYRTLR 588 >gi|299134180|ref|ZP_07027373.1| tol-pal system protein YbgF [Afipia sp. 1NLS2] gi|298590927|gb|EFI51129.1| tol-pal system protein YbgF [Afipia sp. 1NLS2] Length = 343 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 17/123 (13%), Positives = 32/123 (26%), Gaps = 8/123 (6%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + K Y A + +YP + V Y +G S Q Sbjct: 218 SPKDEFDLGLGYMQHKDYGLAEETMRNFTVKYPSDRLVGDAQYWLGESLYQR-------- 269 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + + + + +Y S A + L K+ + +Y A Sbjct: 270 KKYREAAEAFLAVTSKYDKSAKAPDAMLRLGESLAALKEKDAACAAFGEVMRKYPRASNS 329 Query: 213 FQL 215 + Sbjct: 330 VKQ 332 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 34/93 (36%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G ++ R+ + +D Y + + + +A E F + + + A + Sbjct: 236 GLAEETMRNFTVKYPSDRLVGDAQYWLGESLYQRKKYREAAEAFLAVTSKYDKSAKAPDA 295 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 +L + + A + E + +YP + N Sbjct: 296 MLRLGESLAALKEKDAACAAFGEVMRKYPRASN 328 Score = 39.3 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 22/125 (17%) Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 +G+ Y Q + L + M +Y + V A++++ Sbjct: 225 LGLGYMQ--------HKDYGLAEETMRNFTVKYPSDRLVGDAQYWLGESL---------- 266 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 +R +Y A F V + Y + A +AM RL E+ AL D A + + Sbjct: 267 ----YQRKKYREAAEAFLAVTSKYDKSAKAPDAMLRLGESLAALKEKDAACAAFGEVMRK 322 Query: 257 YPQGY 261 YP+ Sbjct: 323 YPRAS 327 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 44/132 (33%), Gaps = 14/132 (10%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 S L + R ++ ++ + +++ +++ A E + +P + + Sbjct: 204 PSPSGGLTTAPPTRSPKDEFDLGLGYMQHKDYGLAEETMRNFTVKYPSDRLVGDAQYWLG 263 Query: 102 FVQYSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 Y KY++A E ++ Y +S +G S A + + Sbjct: 264 ESLYQRKKYREA---AEAFLAVTSKYDKSAKAPDAMLRLGESLAAL--------KEKDAA 312 Query: 159 LQYMSRIVERYT 170 ++ +Y Sbjct: 313 CAAFGEVMRKYP 324 >gi|170750722|ref|YP_001756982.1| tol-pal system protein YbgF [Methylobacterium radiotolerans JCM 2831] gi|170657244|gb|ACB26299.1| tol-pal system protein YbgF [Methylobacterium radiotolerans JCM 2831] Length = 329 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 8/98 (8%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + +A Y A +Y+QA ++I +P V Y +G SY R+ Sbjct: 205 ADYDAAVELYRAKQYEQAEMGLRQFIQSHPRDNRVAGATYWLGESYLARGRN-------- 256 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + + ++ Y S A + V N L A+E Sbjct: 257 REAAEQFLKVSTDYARSSQAPDAMLKLGVTLNALGARE 294 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 35/73 (47%) Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 N++A +G YL RG A +F V +Y+ + A +AM +L AL ++A Sbjct: 237 NRVAGATYWLGESYLARGRNREAAEQFLKVSTDYARSSQAPDAMLKLGVTLNALGAREQA 296 Query: 247 REVVSLIQERYPQ 259 ++ + ++P Sbjct: 297 CATLAELDRKFPN 309 >gi|307717906|ref|YP_003873438.1| hypothetical protein STHERM_c01910 [Spirochaeta thermophila DSM 6192] gi|306531631|gb|ADN01165.1| hypothetical protein STHERM_c01910 [Spirochaeta thermophila DSM 6192] Length = 137 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 10/98 (10%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + A + + G + + + + + E++++A + + A Sbjct: 1 MRRTAFLVGVLVITILSTGACKST-----PPEIPEGLSREELFQRAQEAVDRGDEQTALL 55 Query: 79 YFNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQA 113 Y+ +P A + A + Y G Y +A Sbjct: 56 YYQTVLERYPDDLEGRAA--AEYEIAHIYYKQGLYGEA 91 Score = 35.5 bits (81), Expect = 8.4, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 15/112 (13%) Query: 138 GMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 G+S ++ + D+ + L Y ++ERY + AA E E Sbjct: 31 GLSREELFQRAQEAVDRGDEQTALLYYQTVLERYPD-----DLEGR--------AAAEYE 77 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 I Y K+G Y A F +L+ Y E + V + L+ + E Sbjct: 78 IAHIYYKQGLYGEAKDLFLTILSYYDTQEGTSLPLWIKVLSEKHLSWIQEKE 129 >gi|288926047|ref|ZP_06419976.1| putative TPR domain protein [Prevotella buccae D17] gi|288337267|gb|EFC75624.1| putative TPR domain protein [Prevotella buccae D17] Length = 1110 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 24/50 (48%) Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + ++ NY D EH ++A L Y + + A ++ ++ YP+ W Sbjct: 612 LRRLVDNYPDFEHLDDAYYHLFLLYSRMGMPTVAESYINKLKRGYPKSRW 661 >gi|119471077|ref|ZP_01613636.1| putative lytic cell-wall binding lipoprotein [Alteromonadales bacterium TW-7] gi|119445917|gb|EAW27198.1| putative lytic cell-wall binding lipoprotein [Alteromonadales bacterium TW-7] Length = 623 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 46/263 (17%), Positives = 85/263 (32%), Gaps = 43/263 (16%) Query: 22 FALTIF-FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 A+T+ +++ C S++ V + + + R A+ +LK N S+A +Y Sbjct: 5 LAITLSALALSGCVTESSYNGSNKPVVKNKINNAGAARTRIALALQYLKTGNNSQA-KY- 62 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV--DYVYYLVG 138 R FA + A+ G+ A ++ + P+ N +Y +L G Sbjct: 63 -NLERAAEFAPNLPEVHYSMAYYYQQVGENPLADRAYQKALDIKPDDPNTLNNYGVFLCG 121 Query: 139 MSYAQMIRDVPYDQRATKLMLQ--YMSRIVERYTN-------SPYVKGARFYVTVGRNQ- 188 I + ++ R+ E Y N + A Y N Sbjct: 122 ------IDEYDRATDQFLKAIEIPTYIRVAESYENLALCAIEFDDFENAETYFKQALNHS 175 Query: 189 ---------LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARLVEAYV 238 LA +Y K Y A +L + D + A+ Sbjct: 176 SQRTSTLISLA------ALFYAKSDLYKA-----NDILKKHDDTGRVSSRALMLSYLVKN 224 Query: 239 ALALMDEAREVVSLIQERYPQGY 261 + ++EA +V S + + Y Sbjct: 225 RMGRIEEAEKVASTLLQTYSTSK 247 >gi|113475260|ref|YP_721321.1| hypothetical protein Tery_1568 [Trichodesmium erythraeum IMS101] gi|110166308|gb|ABG50848.1| protein of unknown function DUF323 [Trichodesmium erythraeum IMS101] Length = 820 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 71/248 (28%), Gaps = 57/248 (22%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 ++ + + + + ++ + A FNQ + P A + V + GKY A Sbjct: 314 IQNAESYFNQGLKYRNQRKYDLAIAEFNQAIKLNP--KYAE-AYYNRGNVYNTQGKYDLA 370 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + I P+ VY G+ Y + Q L L ++ ++ Sbjct: 371 LVDYNQAIKFNPKYTQ---VYNNKGIIYNK--------QGKYDLALAEFNQAIKLNP--K 417 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKR-------GEYVAAIPRF 213 Y K + N ++ I + Y R G+Y A+ F Sbjct: 418 YSKVYNNR-GIVYNNQRKYDLAIAEFNQAIKLNPKYAEAYYNRGNIYNNQGKYDLALAEF 476 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV----------VSLIQERYPQGYWA 263 + +AY L+ + + + + + W Sbjct: 477 NQAIKFKPKY----------AKAYYNRGLVYKTQRNIERVISDFEKAAKLYKEQQNQRWY 526 Query: 264 RYVETLVK 271 + +K Sbjct: 527 QNSLDKLK 534 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 45/148 (30%), Gaps = 19/148 (12%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKA-YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + +Y Y + ++ + + A +Y F + + GKY Sbjct: 347 NPKYAEAYYNRGNVYNTQGKYDLALVDYNQAIK----FNPKYTQVYNNKGIIYNKQGKYD 402 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + + I P+ VY G+ Y QR L + ++ ++ Sbjct: 403 LALAEFNQAIKLNPKYSK---VYNNRGIVYNN--------QRKYDLAIAEFNQAIKLNP- 450 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y A + N ++ + + Sbjct: 451 -KYA-EAYYNRGNIYNNQGKYDLALAEF 476 >gi|70607745|ref|YP_256615.1| hypothetical protein Saci_2026 [Sulfolobus acidocaldarius DSM 639] gi|68568393|gb|AAY81322.1| conserved TPR domain protein [Sulfolobus acidocaldarius DSM 639] Length = 399 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 87/280 (31%), Gaps = 57/280 (20%) Query: 39 ERQSSRDVYLDSVTDVRYQREVY----EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94 + Y + Q + Y + + + N+S+A F++ R PF + Sbjct: 2 NTNETSKNYDEMGEQNPSQDQGYLYHFNRGLAYFNLNNYSEAIREFDEAIRLNPFHADSH 61 Query: 95 KSLLMSAFVQYSAGK--------YQQAASLGEEYITQYPESKNVDYVYYLVGMS------ 140 +S +G Y++A +E I P++ Y +Y G++ Sbjct: 62 YYKALSLIALQRSGSVNAGISDLYERAILEFDEAIKIDPKNPE--Y-HYQKGLALEILGR 118 Query: 141 -------YAQMIRDVPY-------------DQRATKLMLQYMSRIVERYTNSP--YVKGA 178 Y I+ P DQ + + + + Y + A Sbjct: 119 QYEALLEYQDAIKLNPRNPEYYYRKAIILQDQEKYVDAIAEVDTAIRLNPKNSTYYFRKA 178 Query: 179 RF-----YVTVGRNQLAAKEVE----IGRYYLKRGEYVAAIPRFQLVLANYSD----AEH 225 + +QL K + + YY ++G + + R+ VL +Y + + + Sbjct: 179 LLLKSMGKLKEALDQL-DKAISLNPQVAEYYHQKGLILKELKRYDDVLKDYDNAIKLSPN 237 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 E R Y L ++A + P Y Sbjct: 238 NPEYHFRKGVLYYELGKYEKAVMELEESVRLNPNNPEYHY 277 >gi|268317778|ref|YP_003291497.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus marinus DSM 4252] gi|262335312|gb|ACY49109.1| Tetratricopeptide TPR_2 repeat protein [Rhodothermus marinus DSM 4252] Length = 711 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 18/149 (12%), Positives = 42/149 (28%), Gaps = 30/149 (20%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + + + +A + F + P A + G+ +A E + Sbjct: 11 EGEDLFLKGAYPQALQTFEAVLEEDPSNPYALN---DAGLAYAELGQLDRAVECFERALQ 67 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 P +N + +I + + L ++ R E +S + Sbjct: 68 ADPGHENA----------FFNLIDQLLRYNQ-FDLAVETFLRYQEAIPDSE-----QKR- 110 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 E ++ R R ++ A + Sbjct: 111 --------KYEKDLAR--AARKQWEATLN 129 >gi|315187508|gb|EFU21264.1| putative lipoprotein [Spirochaeta thermophila DSM 6578] Length = 137 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 10/98 (10%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + A + + G + + + + + E++++A + + A Sbjct: 1 MRRTAFLVGVLVITILSTGACKST-----PPEIPEGLSREELFQRAQEAVDRGDEQTALL 55 Query: 79 YFNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQA 113 Y+ +P A + A + Y G Y +A Sbjct: 56 YYQTVLERYPDDLEGRAA--AEYEIAHIYYKQGLYGEA 91 Score = 35.9 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 15/112 (13%) Query: 138 GMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 G+S ++ + D+ + L Y ++ERY + AA E E Sbjct: 31 GLSREELFQRAQEAVDRGDEQTALLYYQTVLERYPD-----DLEGR--------AAAEYE 77 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 I Y K+G Y A F +L+ Y E + V + L+ + E Sbjct: 78 IAHIYYKQGLYGEAKELFLTILSYYDTQEGTSLPLWIKVLSEKHLSWIQEKE 129 >gi|309379699|emb|CBX21688.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 237 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 42/125 (33%), Gaps = 11/125 (8%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S V + +Y +A+ + FS A +A++S+ + + G Sbjct: 111 SAHTVETAQNLYNQALKHYQNGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 169 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168 + +G Y ++ +S + +G + +D+ +++ Sbjct: 170 CESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIAR---------ATWRSLIQA 220 Query: 169 YTNSP 173 Y SP Sbjct: 221 YPGSP 225 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 7/52 (13%) Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 RF+ D+ A EAM ++ E L D AR + + YP Sbjct: 181 ANRFK-------DSPTAPEAMFKIGECQYRLQQKDIARATWRSLIQAYPGSP 225 >gi|297274066|ref|XP_002800721.1| PREDICTED: intraflagellar transport protein 88 homolog [Macaca mulatta] Length = 805 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 36/299 (12%), Positives = 88/299 (29%), Gaps = 56/299 (18%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 409 QKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 468 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 469 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 521 Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157 ++ + +N V Y + Y Q++ VP D + Sbjct: 522 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVVPTDPQVLSKLGELYDHEG 581 Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196 QY + ++ + + A Y + + ++ + Sbjct: 582 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 641 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + + G Y A+ ++ + + E + LV L L D A+E ++ Sbjct: 642 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 696 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KAV +L+++++++A E + + V + + + Y + QA+S Sbjct: 401 NKAVTYLRQKDYNQAVEILKMLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 458 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 459 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 514 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y Sbjct: 515 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 550 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AI V++ +++L E Y +A + Sbjct: 551 QAIEWLMQVVSVVPTDPQV---LSKLGELYDHEGDKSQAFQY 589 >gi|291563222|emb|CBL42038.1| ChAPs (Chs5p-Arf1p-binding proteins) [butyrate-producing bacterium SS3/4] Length = 627 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 42/101 (41%), Gaps = 3/101 (2%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K+ L + ++ +C G + S D + +Y++ ++ E+++ A E Sbjct: 1 MRKWFLIMATAVVLCSACGKKDASVNDATQAAQASSTEAENLYKEGSQYVGEEDYESAIE 60 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +C P + K+ + + +Y +A S+ ++ Sbjct: 61 SLLKCIELDP--DYS-KAYIQLSKAYIGNEEYDEAMSILQQ 98 >gi|298506099|gb|ADI84822.1| TPR domain lipoprotein [Geobacter sulfurreducens KN400] Length = 896 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 85/296 (28%), Gaps = 88/296 (29%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + + + L G +S + E+Y + V L+E N A Sbjct: 1 MSRSFIITGLVVLMFTLSGCGGKS--------------RDELYTEGVKLLQEGNPGGAVV 46 Query: 79 YFN-QCSRDFPF--------------AGVARKSL-----------------LMSAFVQYS 106 F +D F ++ L A + S Sbjct: 47 LFKSALEKDQNFQDARYQLAKAYQALGKY-EQAEKEYLKVLKQNPSKTDIVLELAKLYNS 105 Query: 107 AGKYQQAASLGEEYITQYPESKNV------DYVYYLVGM---SYAQMIRDVPYDQRATKL 157 K QA +Y+ P S Y L GM + + + + R T Sbjct: 106 QRKPDQAVEQAGKYLQSNPGSAEALEVLGLGYA--LKGMPAEAERNFLLALEKEPRRTSA 163 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVG----------RNQLAAKEVEIGRYYLKRGEYV 207 LQ ++E+ S K AR + N LA+ E+ +G Sbjct: 164 KLQLAVLLMEQ--KSSREKEARALIDEILTADPGNVKAHNLLASYELSLG---------- 211 Query: 208 AAIPRFQLVLANYSD----AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + L Y + R + MD+A + + +++PQ Sbjct: 212 ---NR-EQALEIYRKVAALTPGDPAPLYRQGVILLEKGEMDKAEKTAETLVQKFPQ 263 Score = 38.6 bits (89), Expect = 0.90, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 59/189 (31%), Gaps = 35/189 (18%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +Y + V+ L++ KA + + FP + + L Y Y A + Sbjct: 231 PAPLYRQGVILLEKGEMDKAEKTAETLVQKFP--QKSEGARLKGLIA-YQRKNYADAITA 287 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + + P + Y +G+S + L RI++ + Sbjct: 288 LQTSVKIAPSLEG----LYYLGLSMYSR--------GELENALSQFRRILDHTPDF---- 331 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 + + L K + + +A R + D+ A A L A Sbjct: 332 -VQARLLTALILLNQK---------RVDDAIAEANRA---IET--DSRSAL-ARNILGSA 375 Query: 237 YVALALMDE 245 Y+A + DE Sbjct: 376 YLAKGMYDE 384 >gi|163758788|ref|ZP_02165875.1| hypothetical protein HPDFL43_15232 [Hoeflea phototrophica DFL-43] gi|162284078|gb|EDQ34362.1| hypothetical protein HPDFL43_15232 [Hoeflea phototrophica DFL-43] Length = 320 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 46/124 (37%), Gaps = 14/124 (11%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + ++Y+ + +++ A + F +P G A ++ QYS G+ Sbjct: 189 QTASLNSPDDLYQAGYNHMLTGDYALAEQVFGDYIAAYPEGGRAADAMFWLGEAQYSQGR 248 Query: 110 YQQAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 YQ + ++ +YP++ +GMS A++ + + ++ Sbjct: 249 YQD---SAKTFLDVHKKYPQADKGADSLLKLGMSLAKLDNR--------ETACATLREVL 297 Query: 167 ERYT 170 RY Sbjct: 298 IRYP 301 >gi|321443948|gb|EFX60242.1| hypothetical protein DAPPUDRAFT_124876 [Daphnia pulex] Length = 389 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 64/186 (34%), Gaps = 18/186 (9%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAG 108 + +E+A + + + A F + D PF + VA + L A + S Sbjct: 175 PATPQAPFAAFERANCLVDMNDPNGAINEFAKFKAD-PFRQSPVAPLAYLRLATLLRSQN 233 Query: 109 KYQQAASLGEE----YITQYPESKN----VDYVYYLVGMSYAQMIRDVP--YDQRATKLM 158 K +AA+ +E + + Y GM+ ++ + P D Sbjct: 234 KPAEAAAALQEGRTHFEASLAADPARAGWAPLMQYHHGMALKELAKKDPAKLDVAKLTEA 293 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRN-----QLAAKEVEIGRYYLKRGEYVAAIPRF 213 + +++ NSP A + R +LAA + + R K E AA + Sbjct: 294 RAQFDGLKQKFPNSPEAPDAAWRSGQCRREEHAPRLAAARLVLARTDAKPEEIAAATTQL 353 Query: 214 QLVLAN 219 Q + Sbjct: 354 QDAVKQ 359 >gi|322420010|ref|YP_004199233.1| lytic transglycosylase catalytic subunit [Geobacter sp. M18] gi|320126397|gb|ADW13957.1| Lytic transglycosylase catalytic [Geobacter sp. M18] Length = 706 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 8/161 (4%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + IA L WE +++ + +Y + + K Q +A + Sbjct: 61 SFMTGIAAAKLEQWEEAAAQLPAAAEGYPLLADYALYYQGLSLSKLQRHDQALPPLYKLL 120 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +D+P + +AR++L++ A +AG ++A ++ +YP + Y + ++ Sbjct: 121 KDYPGSRLARQALILYADSLAAAGYPKEAQQSYATFVERYPSGGDSISALYGSALCREKL 180 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + I Y SP+ A + Sbjct: 181 --------GEAAAAAAILRNIYLIYPASPFADKAALELQNL 213 Score = 38.6 bits (89), Expect = 0.87, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 22/137 (16%) Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 DY Y G+S +++ R +DQ L + ++++ Y S + A + + + L Sbjct: 92 ADYALYYQGLSLSKLQR---HDQ-----ALPPLYKLLKDYPGSRLARQA---LILYADSL 140 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AA G A + + Y + A+ L A + Sbjct: 141 AA-----------AGYPKEAQQSYATFVERYPSGGDSISALYGSALCREKLGEAAAAAAI 189 Query: 250 VSLIQERYPQGYWARYV 266 + I YP +A Sbjct: 190 LRNIYLIYPASPFADKA 206 >gi|222100626|ref|YP_002535194.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga neapolitana DSM 4359] gi|221573016|gb|ACM23828.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga neapolitana DSM 4359] Length = 379 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 28/89 (31%), Gaps = 24/89 (26%) Query: 100 SAFVQYSAGKYQQAASLGEEY------ITQYPESKNV---DYVYYLVGMSYAQMIRDVPY 150 ++ Y +Y +A + I +NV D VYY +SY Sbjct: 300 LGYMFYLRREYDEAI---RRFDLAIEEI----GEENVYFKDDVYYYRALSYYFK------ 346 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + +E++ +S Y A Sbjct: 347 --GDLSTARRLFEDFIEKFPDSEYTDDAE 373 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 13/80 (16%) Query: 199 YYLKRGEYVAAIPRFQLVLAN-------YSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 +YL+R Y AI RF L + + D + A+ +Y + AR + Sbjct: 304 FYLRRE-YDEAIRRFDLAIEEIGEENVYFKDDVYYYRAL-----SYYFKGDLSTARRLFE 357 Query: 252 LIQERYPQGYWARYVETLVK 271 E++P + E +K Sbjct: 358 DFIEKFPDSEYTDDAEYFLK 377 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 35/107 (32%), Gaps = 2/107 (1%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPF 89 A+ + E S + + + ++ +F + + +A F+ Sbjct: 268 ALSTISTRESTPSVVYVPSKESRIERAKSLWFLGYMFYLRREYDEAIRRFDLAIEEIGEE 327 Query: 90 AGV-ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A Y G A L E++I ++P+S+ D Y Sbjct: 328 NVYFKDDVYYYRALSYYFKGDLSTARRLFEDFIEKFPDSEYTDDAEY 374 >gi|156543124|ref|XP_001605583.1| PREDICTED: similar to tpr repeat nuclear phosphoprotein [Nasonia vitripennis] Length = 1215 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 94/275 (34%), Gaps = 33/275 (12%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 ++ L R+ E A+T +++A + + +Y + + + + Sbjct: 483 LTESLERSKADAEHHPSYYNSIAVTTTYNLARVYEAQCMFDKAEKLYKNVLKEHPNYIDC 542 Query: 61 YEK-AVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 Y + + + +A ++F + + P + L A ++ Sbjct: 543 YLRLGCMARDKGQIYEASDWFKDALRIDNEHP-DAWSLLGNLHLA-----KQEWGPGQKK 596 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNS 172 E I + P + N Y +G + Q + D+ R + ++ + Sbjct: 597 FER-ILRNPSTNNDAYSLIALGNIWLQTMHQSGKDKDKEKRHQDRAMANYKLVLRNDPKN 655 Query: 173 PYVKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQL 215 + + Y+ R+ A +E + I Y+++ +YV+AI ++ Sbjct: 656 IWATNGVGCLLAHKGYMNEARDIFAQVREATSELPDVWLNIAHVYVEQKQYVSAIQMYEN 715 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 L + H E + L AY+ + EA+ + Sbjct: 716 CLRKFYKYHHV-EILGYLARAYLKAGKLKEAKLTL 749 >gi|330828309|ref|YP_004391261.1| TPR domain-containing protein [Aeromonas veronii B565] gi|328803445|gb|AEB48644.1| TPR domain protein [Aeromonas veronii B565] Length = 263 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 42/130 (32%), Gaps = 22/130 (16%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y +A + +I QYP S V +Y +G S + Sbjct: 155 KEKNYDKAIPAFQGFIKQYPNSGYVPNAHYWLGQLLFNKGDRAG--------ASAQFSTV 206 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 +Y+ SP A + + QL K+ E +Y + V+ Y + Sbjct: 207 ANKYSKSPKRADALLKLGML-AQLDGKKTEAKSFY-------------EQVIKGYPNTSP 252 Query: 226 AEEAMARLVE 235 A+ A L + Sbjct: 253 AQLAKQSLAK 262 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 51/132 (38%), Gaps = 9/132 (6%) Query: 55 RYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + + + Y+ AV LKE+N+ KA F + +P +G + + ++ G A Sbjct: 140 QDENQAYDAAVNMVLKEKNYDKAIPAFQGFIKQYPNSGYVPNAHYWLGQLLFNKGDRAGA 199 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 ++ +Y +S +GM D + T + ++++ Y N+ Sbjct: 200 SAQFSTVANKYSKSPKRADALLKLGM-------LAQLDGKKT-EAKSFYEQVIKGYPNTS 251 Query: 174 YVKGARFYVTVG 185 + A+ + Sbjct: 252 PAQLAKQSLAKL 263 >gi|315126278|ref|YP_004068281.1| prenylyltransferase domain-containing protein [Pseudoalteromonas sp. SM9913] gi|315014792|gb|ADT68130.1| prenylyltransferase domain-containing protein [Pseudoalteromonas sp. SM9913] Length = 250 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 45/130 (34%), Gaps = 21/130 (16%) Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 Y ++ + + + Y NS Y A +++ Sbjct: 134 YERAVALIMKDKRYD-------QAIPEFQAFLTTYPNSVYTSNAHYWLGQLLTI------ 180 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 + + V A F++V+ + ++ +AM +L L EA+++++ + Sbjct: 181 --------KNDGVKAAEHFKVVVNEFPNSNKRPDAMLKLGTLLQEQGLKAEAQKILNELI 232 Query: 255 ERYPQGYWAR 264 +YP A+ Sbjct: 233 NQYPSTTAAK 242 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 47/141 (33%), Gaps = 23/141 (16%) Query: 50 SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 S + + E YE+AV +K++ + +A F +P + Y G Sbjct: 123 SYSSDLSENEAYERAVALIMKDKRYDQAIPEFQAFLTTYPNSVYTSN-------AHYWLG 175 Query: 109 KY----QQAASLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + E + + ++P S +G + +Q + Sbjct: 176 QLLTIKNDGVKAAEHFKVVVNEFPNSNKRPDAMLKLG--------TLLQEQGLKAEAQKI 227 Query: 162 MSRIVERYTNSPYVKGARFYV 182 ++ ++ +Y ++ K A + Sbjct: 228 LNELINQYPSTTAAKLATERL 248 >gi|300867207|ref|ZP_07111870.1| Lytic transglycosylase, catalytic [Oscillatoria sp. PCC 6506] gi|300334821|emb|CBN57036.1| Lytic transglycosylase, catalytic [Oscillatoria sp. PCC 6506] Length = 725 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 32/264 (12%), Positives = 74/264 (28%), Gaps = 61/264 (23%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 + L ER + Y A + + +KA + +D+P Sbjct: 54 TLVSLSPIERSQKLEAIAQQPQSKARSEARYLLAKDLMAKGEAAKALTLLERLEQDYP-- 111 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 +A +++ A +AG+ +A + ++ + +Y Y++G + Sbjct: 112 ILASHIVMLRAQAYEAAGEAGKAENTWQDLLKRYENDPVAAEALYILGKTQ--------- 162 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKG-ARFYVT------VGRNQLAAKEVEIGRY---- 199 + ++ + P AR + +A + + Y Sbjct: 163 -PEHWDKA-------IAQFPSHPRTIEMARSRLKTNPNQPELLLLIAKHGLYLKDYGSIV 214 Query: 200 ----------------------YLKRGEY-VAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 Y ++ +Y AAI Y+ + + R Sbjct: 215 ETLAQKYSAFLKPEDWEAIAFGYWEKQDYGKAAIA--------YAKSPRTPRNLYRKARG 266 Query: 237 YVALALMDEAREVVSLIQERYPQG 260 + E++ + +P G Sbjct: 267 LWLDGKIPESKIAYKQLITEFPDG 290 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 80/228 (35%), Gaps = 31/228 (13%) Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKS 96 WE+Q + R R +Y KA + ++ + Q +FP Sbjct: 238 WEKQDYGKAAIAYAKSPRTPRNLYRKARGLWLDGKIPESKIAYKQLITEFPDGGEDTALG 297 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD-QRAT 155 L+ + + ++A + I+++P+ + + D Q + Sbjct: 298 LIRIS----RLSEPKEALVYLDRAISKFPD--RAPEAL---------LDKSKILDKQGSE 342 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 KL Q ++++Y NS A + Q AA K G A + + Sbjct: 343 KLASQTRQLLLQKYNNS----DAAAELRWTIAQQAA----------KAGNLKIAWQQARD 388 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + N D+ A EA + + + ++A++ RYP+ Y+A Sbjct: 389 ITNNNPDSILAPEAAFWVGKWAQRIGRQEDAQKAFEYTIARYPESYFA 436 >gi|298252040|ref|ZP_06975843.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter racemifer DSM 44963] gi|297546632|gb|EFH80500.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter racemifer DSM 44963] Length = 1170 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 49/167 (29%), Gaps = 48/167 (28%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-----YSAGKYQQAASL 116 +A + + +A + + R P + + G+Y++A + Sbjct: 340 NRANSLNELGKYEEALATYEEVIRLDPNGA--------RIYSNKGSVLFQLGRYEEAVAA 391 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 EE+I PES Y+ G + + R + L + + Sbjct: 392 FEEHIRLDPESPE---AYFNKGKTLIALDR--------PEEALAMFEQALWLDP------ 434 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 R Y +G + A+ R++ L + + Sbjct: 435 ------------------YDARKYYHKGNMLMALKRYEEALVVFEQS 463 >gi|294054026|ref|YP_003547684.1| hypothetical protein Caka_0489 [Coraliomargarita akajimensis DSM 45221] gi|293613359|gb|ADE53514.1| hypothetical protein Caka_0489 [Coraliomargarita akajimensis DSM 45221] Length = 1026 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 27/190 (14%), Positives = 68/190 (35%), Gaps = 28/190 (14%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK---NV 130 A + + + ++ ++ + + A Y++ +LG +I ++P + NV Sbjct: 374 KDAIDLGERYLATDNYKSYRKEVIVKLVALYFQAEDYEKLYALGSSFIDEHPGHEYGNNV 433 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 +++ G ++ + + + + + ++ Y +P + A +++ +G Sbjct: 434 --AHFM-GFAWMRENK--------IEEARKVLGGYLQSYPVAPLSQAANYWLGLGNVI-- 480 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 +E E AA F ++ Y + EA R + + A Sbjct: 481 EQEFE------------AAAANFDHIIERYPEGSFIAEARFRRAVCDFGMGDYEAAETGF 528 Query: 251 SLIQERYPQG 260 + YPQ Sbjct: 529 TEWVASYPQN 538 Score = 43.2 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 27/204 (13%), Positives = 67/204 (32%), Gaps = 31/204 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 +++E +A + + +P A +++ + +++ AA+ + I + Sbjct: 438 GFAWMRENKIEEARKVLGGYLQSYPVAPLSQAANYWLGLGNVIEQEFEAAAANFDHIIER 497 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR---- 179 YPE + + + M + + V Y + A Sbjct: 498 YPEGSFIAEARFRRAVCDFGM--------GDYEAAETGFTEWVASYPQNHLRGEAEVFLG 549 Query: 180 ------FYVTVGRNQLAAKEVEIGRYYLKRGEY------VAAIPRFQLVL-------ANY 220 V A+ E G+ L Y + A R++ ++ +Y Sbjct: 550 DIDAYYAAVAESLQHYASVESYTGKMNLINHAYFESARLLDANERYEAMIQLLQQYMDHY 609 Query: 221 SDAEHAEEAMARLVEAYVALALMD 244 + + +A+ ++ +AY +L + Sbjct: 610 QETGNLTQAILQIGQAYESLGQPE 633 Score = 39.3 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 47/158 (29%), Gaps = 25/158 (15%) Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 A + L A+ + +T +PES YY + + Sbjct: 825 PYASPATLAWIGESMLHKDPALASLAIDRVLTDHPESLAAPSAYYTK-----SKMLEAEK 879 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 D A +Q + I ER+ P QL +Y AI Sbjct: 880 DITA---AIQVLDFIAERFPTWPQAPEVTLRAATLTAQL--------------NDYPKAI 922 Query: 211 PRFQLV--LANYSDAEHAEEAMARLVEAYVALALMDEA 246 R+ V + ++ E EA R+ Y A +A Sbjct: 923 ERYLSVLQVRDWRG-EAWAEACFRIATCYEATGDTLKA 959 >gi|316932668|ref|YP_004107650.1| tol-pal system protein YbgF [Rhodopseudomonas palustris DX-1] gi|315600382|gb|ADU42917.1| tol-pal system protein YbgF [Rhodopseudomonas palustris DX-1] Length = 342 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 12/97 (12%), Positives = 27/97 (27%), Gaps = 8/97 (8%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 Y A + +YP++ Y +G S+ Q + + Sbjct: 221 EFDLGIGYMQRRDYALAEETMRNFAQKYPDNPLTADAQYWLGESFFQR--------QMYR 272 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + + ++ + A + + L KE Sbjct: 273 DAAEAFLAVTSKHEKAGKAPDALLRLGQSLSALKEKE 309 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 14/110 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 +R L + M ++Y ++P A++++ G + +R Y A Sbjct: 231 RRDYALAEETMRNFAQKYPDNPLTADAQYWL--------------GESFFQRQMYRDAAE 276 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 F V + + A A +A+ RL ++ AL + A + I +YPQ Sbjct: 277 AFLAVTSKHEKAGKAPDALLRLGQSLSALKEKEAACAALGEIGRKYPQAS 326 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 48/138 (34%), Gaps = 15/138 (10%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 L ++ + R+ ++ + +++ ++++ A E ++ +P + + + Sbjct: 209 LTTLPPSQTPRDEFDLGIGYMQRRDYALAEETMRNFAQKYPDNPLTADAQYWLGESFFQR 268 Query: 108 GKYQQAASLGEEYITQYPESK---NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y+ A E ++ + + +G S + + + + + Sbjct: 269 QMYRDA---AEAFLAVTSKHEKAGKAPDALLRLGQSLSAL--------KEKEAACAALGE 317 Query: 165 IVERYTN-SPYVKGARFY 181 I +Y S VK A Sbjct: 318 IGRKYPQASSGVKKAVDR 335 >gi|119628671|gb|EAX08266.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_a [Homo sapiens] Length = 796 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 437 QKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 496 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 497 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 549 Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157 ++ + +N V Y + Y Q++ +P D + Sbjct: 550 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 609 Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196 QY + ++ + + A Y + + ++ + Sbjct: 610 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 669 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + + G Y A+ ++ + + E + LV L L D A+E ++ Sbjct: 670 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 724 Score = 35.5 bits (81), Expect = 7.6, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 65/222 (29%), Gaps = 67/222 (30%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KAV +L+++++++A E + V + + + Y + QA+S Sbjct: 429 NKAVTYLRQKDYNQAVEILKVLEKKD--NRVKSAAATNLSALYYMGKDFAQASSYADIAV 486 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 487 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 542 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y Sbjct: 543 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 578 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AI V++ +++L E Y +A + Sbjct: 579 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 617 >gi|2407639|gb|AAB70574.1| protein phosphatase 5 [Xenopus laevis] Length = 492 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 43/147 (29%), Gaps = 25/147 (17%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110 + E+ E+A + + +++ A +Y+ Q P +SL Y Sbjct: 17 KEKTAEELKEQANEYFRVKDYDHAVQYYTQAIDLSPDTAIYYGNRSL-----AYLRTECY 71 Query: 111 QQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 A + I + Y+ YY S + K L+ +V+ Sbjct: 72 GYALADASRAIQL-----DAKYIKGYYRRAASNMAL--------GKLKAALKDYETVVKV 118 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVE 195 + A+ + K E Sbjct: 119 RPHDK---DAQMKFQECNKLVRQKAFE 142 >gi|86748939|ref|YP_485435.1| hypothetical protein RPB_1816 [Rhodopseudomonas palustris HaA2] gi|86571967|gb|ABD06524.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 321 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 34/119 (28%), Gaps = 14/119 (11%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + + Y A + ++YP Y +G S+ Q Sbjct: 196 SPRDEFDLGIGYMQRRDYALAEETMRNFASKYPNDALTPDSQYWLGESFFQR-------- 247 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV------EIGRYYLKRGE 205 + + + + +Y S A + + L KE EIGR Y K Sbjct: 248 QMYRDAAEAFLAVTSKYDKSAKAPDALLRLGQSLSALKEKEAACAALGEIGRKYPKASA 306 Score = 42.4 bits (99), Expect = 0.074, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 14/110 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 +R L + M +Y N +++++ G + +R Y A Sbjct: 210 RRDYALAEETMRNFASKYPNDALTPDSQYWL--------------GESFFQRQMYRDAAE 255 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 F V + Y + A +A+ RL ++ AL + A + I +YP+ Sbjct: 256 AFLAVTSKYDKSAKAPDALLRLGQSLSALKEKEAACAALGEIGRKYPKAS 305 >gi|83814577|ref|YP_446180.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855] gi|83755971|gb|ABC44084.1| tetratricopeptide repeat domain protein [Salinibacter ruber DSM 13855] Length = 564 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 40/100 (40%), Gaps = 1/100 (1%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 F + +G S+ ++++++ ++E+ V + ++ A+E F + Sbjct: 9 VCVFGFLLLLSIGMPGTSAHAQQAEAISEIENAELLFEEGVAAFERGEYATAHERF-RLV 67 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 ++ +LLM G+Y+ A E + QY Sbjct: 68 SEYALNRKTTAALLMDGKALVQLGRYRDAIGRLEALLNQY 107 >gi|148232878|ref|NP_001081698.1| protein phosphatase 5, catalytic subunit [Xenopus laevis] gi|49117057|gb|AAH73033.1| PP5 protein [Xenopus laevis] Length = 493 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 43/147 (29%), Gaps = 25/147 (17%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110 + E+ E+A + + +++ A +Y+ Q P +SL Y Sbjct: 18 KEKTAEELKEQANEYFRVKDYDHAVQYYTQAIDLSPDTAIYYGNRSL-----AYLRTECY 72 Query: 111 QQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 A + I + Y+ YY S + K L+ +V+ Sbjct: 73 GYALADASRAIQL-----DAKYIKGYYRRAASNMAL--------GKLKAALKDYETVVKV 119 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVE 195 + A+ + K E Sbjct: 120 RPHDK---DAQMKFQECNKLVRQKAFE 143 >gi|300023925|ref|YP_003756536.1| tol-pal system protein YbgF [Hyphomicrobium denitrificans ATCC 51888] gi|299525746|gb|ADJ24215.1| tol-pal system protein YbgF [Hyphomicrobium denitrificans ATCC 51888] Length = 333 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 39/107 (36%), Gaps = 14/107 (13%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 QR + ++++ N A++++ G + RG+Y AA Sbjct: 221 QRDYGAAETSFTEFLKKFPNDSLSGNAQYWL--------------GETHFVRGQYKAAAS 266 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 F Y+ A +++ +L + L D A + + ++P Sbjct: 267 AFLKGYQTYAQGAKAPDSLLKLAMSLDRLGQKDAACSSFAELATKFP 313 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 49/135 (36%), Gaps = 14/135 (10%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + +++YE+A +L ++++ A F + + FP ++ + + G Sbjct: 200 PASESSNDPKQLYEQAYGYLLQRDYGAAETSFTEFLKKFPNDSLSGNAQYWLGETHFVRG 259 Query: 109 KYQQAASLGEEYIT---QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +Y+ AAS ++ Y + + MS ++ Q+ + + Sbjct: 260 QYKAAASA---FLKGYQTYAQGAKAPDSLLKLAMSLDRL------GQKDA--ACSSFAEL 308 Query: 166 VERYTNSPYVKGARF 180 ++ +P R Sbjct: 309 ATKFPTAPKSVKTRA 323 >gi|28329439|ref|NP_006522.2| intraflagellar transport protein 88 homolog isoform 2 [Homo sapiens] gi|122889169|emb|CAM13405.1| intraflagellar transport 88 homolog (Chlamydomonas) [Homo sapiens] gi|123233609|emb|CAM20430.1| intraflagellar transport 88 homolog (Chlamydomonas) [Homo sapiens] Length = 824 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 428 QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 487 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 488 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 540 Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157 ++ + +N V Y + Y Q++ +P D + Sbjct: 541 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 600 Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196 QY + ++ + + A Y + + ++ + Sbjct: 601 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 660 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + + G Y A+ ++ + + E + LV L L D A+E ++ Sbjct: 661 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 715 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KAV +L+++++++A E + + V + + + Y + QA+S Sbjct: 420 NKAVTYLRQKDYNQAVEILKVLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 477 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 478 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 533 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y Sbjct: 534 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 569 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AI V++ +++L E Y +A + Sbjct: 570 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 608 >gi|312143614|ref|YP_003995060.1| Tetratricopeptide TPR_1 repeat-containing protein [Halanaerobium sp. 'sapolanicus'] gi|311904265|gb|ADQ14706.1| Tetratricopeptide TPR_1 repeat-containing protein [Halanaerobium sp. 'sapolanicus'] Length = 391 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 76/233 (32%), Gaps = 42/233 (18%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 R+++ D+Y + + D + A L+ + + +KA E + Q V + L Sbjct: 158 RENAADIYQEIIDDNPIAEDYLNLAKLYEENGDLNKAVELYEQALAK---GTVQQSIYLN 214 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + G Y A S+ E I P V Y Y+ + + + A + Sbjct: 215 LGNLYQRLGNYNSAISIYELGIKANPN--FVPY--YVKIAENYLALDNFSNAEDALIKAI 270 Query: 160 Q--------------------YMSRIVERYTNS-PYVKGARFYVTVGRNQLAAKEVEIGR 198 + + Y+NS Y LA G+ Sbjct: 271 DINRNSYHAYYLLGVIAQERKDYEQALNYYSNSLTYNPD------YVNAYLAE-----GK 319 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 YL++ EY AI F + + E+ L AY +M+ AR + Sbjct: 320 LYLEKEEYNNAISSFLQAVEKNPE---FFESRYYLGLAYYHANMMEAARAELR 369 >gi|298735702|ref|YP_003728227.1| paralysed flagella protein [Helicobacter pylori B8] gi|298354891|emb|CBI65763.1| paralysed flagella protein [Helicobacter pylori B8] Length = 801 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 186 PLLTTKGYDLNAYLEAKKQIDSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 245 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP N+ Y V + + K ++Y RI+ Sbjct: 246 IKKSLLIDIGTKWIKNYPTDPNIPEALYYVAKALDEN--------NNYKQAMRYYKRILL 297 Query: 168 RYTNSPYVKGARFYVTV 184 Y NS Y A+ + + Sbjct: 298 EYKNSRYAPLAQMRLAI 314 Score = 43.2 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 215 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPNIPEALYY 274 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 275 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 313 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 16/47 (34%) Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + NY + EA+ + +A +A I Y +A Sbjct: 259 IKNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYKNSRYA 305 >gi|145492571|ref|XP_001432283.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124399393|emb|CAK64886.1| unnamed protein product [Paramecium tetraurelia] Length = 457 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 17/124 (13%), Positives = 41/124 (33%), Gaps = 14/124 (11%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + ++ +K + F+ + F +A + F++ + P ++ + + Sbjct: 151 EKAKLSAKILKKGLDFMHKDQFQEAIKQFDELIKINP---HTFQAYFEKGNALFYLLDFD 207 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 QA ++ I N D Y L G + ++ Q T + R + Sbjct: 208 QALWCAKKAIDI---DPNSDSAYNLQGAALSE--------QGNTDQAINSFQRAININPK 256 Query: 172 SPYV 175 + Sbjct: 257 NSEA 260 >gi|119628675|gb|EAX08270.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_e [Homo sapiens] Length = 824 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 428 QKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 487 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 488 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 540 Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157 ++ + +N V Y + Y Q++ +P D + Sbjct: 541 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 600 Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196 QY + ++ + + A Y + + ++ + Sbjct: 601 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 660 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + + G Y A+ ++ + + E + LV L L D A+E ++ Sbjct: 661 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 715 Score = 35.5 bits (81), Expect = 7.8, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 65/222 (29%), Gaps = 67/222 (30%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KAV +L+++++++A E + V + + + Y + QA+S Sbjct: 420 NKAVTYLRQKDYNQAVEILKVLEKKD--NRVKSAAATNLSALYYMGKDFAQASSYADIAV 477 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 478 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 533 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y Sbjct: 534 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 569 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AI V++ +++L E Y +A + Sbjct: 570 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 608 >gi|206900499|ref|YP_002251098.1| tetratricopeptide repeat domain protein [Dictyoglomus thermophilum H-6-12] gi|206739602|gb|ACI18660.1| tetratricopeptide repeat domain protein [Dictyoglomus thermophilum H-6-12] Length = 867 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 52/141 (36%), Gaps = 15/141 (10%) Query: 49 DSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 D + ++ +VY +K + +N+S A EYF + P + + + + Sbjct: 741 DKIKEIPLNDKVYVQKGLEAYNNKNYSIAIEYFKKALSYNPNSP---EIMNNIGACLFML 797 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 KY +A + ++ + DYV ++YA + + ++ ++ Sbjct: 798 NKYDEAIAWFKKALEL-----KKDYVQAYGNLTYAYIQKG------DLISAEDTVNEGLK 846 Query: 168 RYTNSPYVKGARFYVTVGRNQ 188 N +K + + + + Sbjct: 847 YAPNDENLKELKKKIEELKRR 867 >gi|76789284|ref|YP_328370.1| TPR repeat-containing protein [Chlamydia trachomatis A/HAR-13] gi|76167814|gb|AAX50822.1| tetratricopeptide repeat family protein [Chlamydia trachomatis A/HAR-13] Length = 318 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 51/165 (30%), Gaps = 22/165 (13%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++ +Y K L + +S+A + + S FP ++ +S + A + Sbjct: 158 EEIVTAPSDADLKASALYAKGALLFARKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKI 217 Query: 104 Q--------YSAGKYQQAASLGEEYITQYPESK----------NVDYVYYLVGMSYAQMI 145 Y+ Q A Q+P ++ Y Sbjct: 218 HCLQALQEPYNEQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAY---ASCLYSTG 274 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 R ++A+ Y S +E + ++ YV + Q++ Sbjct: 275 RFYEKKRKAS-SAKIYYSIALENFPDTSYVAKCNKRLERLSKQMS 318 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 57/149 (38%), Gaps = 6/149 (4%) Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 A+ +LL ++ +Y +A ++ Q+P + L+ + PY+ Sbjct: 175 YAKGALL------FARKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 ++ + + + +++ N P Y+ A+ GR+Y K+ + +A Sbjct: 229 EQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAYASCLYSTGRFYEKKRKASSAKI 288 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + + L N+ D + + RL + Sbjct: 289 YYSIALENFPDTSYVAKCNKRLERLSKQM 317 Score = 35.5 bits (81), Expect = 8.3, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 81/261 (31%), Gaps = 43/261 (16%) Query: 23 ALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYF 80 AL +F + C+ + R + ++ E+Y E + + + F +A F Sbjct: 7 ALCLFLVLPCGCYARVPSFEPFRGAIAPNRYTPKHSPELYFEIGDKYFQAKKFKQALLCF 66 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VY 134 + FP + K+ + G A +Y + +Y + Sbjct: 67 GMITHHFPEHALHPKAQFLVGLCYLEMGHPDLADKALTQYQEL----ADTEYSEQLFAIK 122 Query: 135 YLVGMSYAQMIR-------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 Y + S+A R P +A L+ IV A + Sbjct: 123 YSIAQSFANGKRKNILPLEGFPKLLKADTDALRIFEEIVTA------PSDADLKASALY- 175 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA---------MARLVEAYV 238 A + R EY AI + V + + E+ + L E Y Sbjct: 176 --AKGALLFA-----RKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228 Query: 239 ALALMDEAREVVSLIQERYPQ 259 + +AR + +++++P Sbjct: 229 E-QYLQDARMNAAALRKQHPN 248 >gi|315644482|ref|ZP_07897614.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus vortex V453] gi|315279989|gb|EFU43286.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus vortex V453] Length = 578 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 73/203 (35%), Gaps = 29/203 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +++AV L + KA +YF + P V A + G Y+ + + Sbjct: 25 FDRAVRSLDRYQYDKALKYFRKAVEYEPDNPVNH---CNMAGILSETGDYKASNDVLAHI 81 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + Q + Y+ + +YA M + + + +E N ++ A Sbjct: 82 LEQ--VDPLMTECYFYMANNYANM--------EQFEKAEEALVTYLEEDPNGQFLDEAEE 131 Query: 181 YVTVGR---------NQLAAKEVEI----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 + + N++ ++E + R L+ G++ A+ + ++ +Y D Sbjct: 132 MMELLHYELNRPAKLNRIKSREGVVEHEHARALLEEGKFAQAVKLLEEIVKDYPDFLA-- 189 Query: 228 EAMARLVEAYVALALMDEAREVV 250 A L AY + D A+ + Sbjct: 190 -ARNNLALAYYYMGRFDTAKRTI 211 Score = 38.9 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 48/138 (34%), Gaps = 17/138 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E A L+E F++A + + +D+P AR A Y G++ A E + Sbjct: 159 EHARALLEEGKFAQAVKLLEEIVKDYPDFLAARN---NLALAYYYMGRFDTAKRTIGEVL 215 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 Q P + L G+ + +Q ++ ++ V P+ F Sbjct: 216 DQEPGN--------LHGLCNLAIFFQHEGNQEQRDRLMDMLTVTV------PFHLEHVFK 261 Query: 182 VTVGRNQLAAKEVEIGRY 199 + L E+ G + Sbjct: 262 LATTMGILGQHEIAYGHF 279 >gi|315606339|ref|ZP_07881355.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] gi|315252030|gb|EFU32003.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] Length = 1110 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 24/50 (48%) Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + ++ NY D EH ++A L Y + + A ++ ++ YP+ W Sbjct: 612 LRRLVDNYPDFEHLDDAYYHLFLLYSRMGMPTVAESYINKLKRGYPKSRW 661 >gi|119492572|ref|ZP_01623790.1| hypothetical protein L8106_08891 [Lyngbya sp. PCC 8106] gi|119453041|gb|EAW34211.1| hypothetical protein L8106_08891 [Lyngbya sp. PCC 8106] Length = 343 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 41/131 (31%), Gaps = 14/131 (10%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 Q + +V + ++ +A+ ++ ++ +A NQ P ++ L Sbjct: 172 QKNYEVVNQYYEKAKQAVKLNNRAMKLIESGDYQEAISTLNQAVNLNPG---QLEAYLNR 228 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + A + ++ I P + YY G Y Q L Sbjct: 229 GVAYSELNSHASAIANYDKAIQLAPNN---AEAYYYRGDEYLQA--------GNAPKALA 277 Query: 161 YMSRIVERYTN 171 ++ ++ N Sbjct: 278 DYNKAIQFNPN 288 >gi|145542869|ref|XP_001457121.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124424936|emb|CAK89724.1| unnamed protein product [Paramecium tetraurelia] Length = 846 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 39/89 (43%), Gaps = 6/89 (6%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D ++ +YEK + ++N++++++ F + + A+ F +Y + Sbjct: 476 DTTNEQYLYEKGSILFNQKNYNESFDIFLELKN----SEYAQNLNYYLGFCYNQKKEYVE 531 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSY 141 A Y+ N++ VY+++G + Sbjct: 532 ALKQLNLYLKT--GKDNLEQVYFIIGTAN 558 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 50/133 (37%), Gaps = 22/133 (16%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVA--RKSLLMSAFVQYSAG 108 TD + +Y K ++ L + KA +YF + P +A + LM Sbjct: 65 TDPDFVNAIYSKGIVELCQNKLDKAKKYFLTSLEKQ-PNHALALNELASLMI-----KEK 118 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y +A E+ P +++Y G+ Y + +R T +QY +++ Sbjct: 119 QYNEALLNLEKGFQIDPNIPDLNY-----GLGYV-----LARLKRKT-EAIQYFDMAIKQ 167 Query: 169 YTNSP--YVKGAR 179 N YV A Sbjct: 168 DPNQKHFYVSKAT 180 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 69/230 (30%), Gaps = 42/230 (18%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ-AASLGEEYI 121 + LF ++ + A N FP +L Y K +Q A + E+ + Sbjct: 418 RGRLFQAQKKYEDAIICLNDGLTKFPQN----LEILDLLAQMYKITKKEQKALEIYEKIL 473 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + ++ Y Y G Q+ + NS Y + +Y Sbjct: 474 SIDTTNEQ--Y-LYEKGSILFN--------QKNYNESFDIFLELK----NSEYAQNLNYY 518 Query: 182 VTVGRNQLAAKEVEIG----RYYLKRGE------Y--VAAIP----RFQLVLANYSD--- 222 + NQ KE YLK G+ Y + +F + Y + Sbjct: 519 LGFCYNQ--KKEYVEALKQLNLYLKTGKDNLEQVYFIIGTANQFLMKFDEAIDGYQNCIS 576 Query: 223 -AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 EA +L Y +++A++ + P + + K Sbjct: 577 QNPKNSEAYFQLGNVYKQDKQIEDAQKAFEQAVKINPSNSVYKQALGIYK 626 >gi|325294873|ref|YP_004281387.1| hypothetical protein Dester_0679 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065321|gb|ADY73328.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 910 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 81/245 (33%), Gaps = 84/245 (34%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 +++ FS+A + +++P K L A V Y GKY++A + E + Sbjct: 205 RKKRFSEALFEIEKLYKEYPE----EKVKLELAKVYYLNGKYEEALNALE--------NV 252 Query: 129 NVDYVYYLVGMSYAQMIRD----------VPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 N + YL Y ++ V Q K + +++ Y ++ YV+ Sbjct: 253 NSEEAKYLKAWCYFKLGHSEKIPQLIGFNVSRPQIPEK-----LKILLDFYRSTFYVE-- 305 Query: 179 RFYVTVGRNQLAAKEV----------EIGRY------YLKRGEY---------------- 206 + +L K + IG Y Y +RG Y Sbjct: 306 --KLKKLYPELYPKALIFSFSTQQPQYIGSYHDLGYIYYERGLYKKSLSMLEKAVQNPTN 363 Query: 207 --------------------VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +A++ + ++ NY + +EA+ ++Y+ A Sbjct: 364 KLLLPRTLYLLGKIGSLNTEIASVV-YTELMKNYQNTSFYKEALIPAAKSYLYSGNTVLA 422 Query: 247 REVVS 251 +++ Sbjct: 423 IKLLK 427 >gi|119472190|ref|ZP_01614392.1| putative periplasmic protein contains a protein prenylyltransferase domain [Alteromonadales bacterium TW-7] gi|119445109|gb|EAW26403.1| putative periplasmic protein contains a protein prenylyltransferase domain [Alteromonadales bacterium TW-7] Length = 223 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 23/135 (17%) Query: 56 YQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY---- 110 + E YE+AV +K++ + +A F + +P + A Y G+ Sbjct: 102 SENEAYERAVALIMKDKRYDQAIPEFQTFLKTYPESVYASN-------AHYWLGQLLTIK 154 Query: 111 QQAASLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 + + + +YP S +G + +Q T L+ ++ +V Sbjct: 155 NDGVKAVDHFRVVVNEYPNSNKRPDAMLKLG--------TLLKEQGLTDESLKILNELVT 206 Query: 168 RYTNSPYVKGARFYV 182 +Y ++ K A + Sbjct: 207 QYPSTTAAKLATDRL 221 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 42/108 (38%), Gaps = 14/108 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + ++ Y S Y A +++ + + V A+ F++V Sbjct: 122 QAIPEFQTFLKTYPESVYASNAHYWLGQLLTI--------------KNDGVKAVDHFRVV 167 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 + Y ++ +AM +L L DE+ ++++ + +YP A+ Sbjct: 168 VNEYPNSNKRPDAMLKLGTLLKEQGLTDESLKILNELVTQYPSTTAAK 215 Score = 38.9 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 44/130 (33%), Gaps = 26/130 (20%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +Y QA + ++ YPES +Y +G + + D + + + Sbjct: 116 KDKRYDQAIPEFQTFLKTYPESVYASNAHYWLG-----QLLTIKNDG---VKAVDHFRVV 167 Query: 166 VERYTNSPYVKGARFYV-TVGRNQ-LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 V Y NS A + T+ + Q L + ++I ++ Y Sbjct: 168 VNEYPNSNKRPDAMLKLGTLLKEQGLTDESLKI----------------LNELVTQYPST 211 Query: 224 EHAEEAMARL 233 A+ A RL Sbjct: 212 TAAKLATDRL 221 >gi|291392959|ref|XP_002712851.1| PREDICTED: intraflagellar transport 88 homolog [Oryctolagus cuniculus] Length = 831 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 32/240 (13%), Positives = 77/240 (32%), Gaps = 40/240 (16%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99 Q+S L +D + K ++ KA E++ D + +L Sbjct: 469 QASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYN 524 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + +A ++ + +N V Y + Y +++ D + Sbjct: 525 IGLSYKKLNRLSEALDC---FLKLHAILRNSAQVLYQIANVY-ELMEDPN-------QAI 573 Query: 160 QYMSRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVL 217 +++ +++ +S A + + K + +YY + Y + I + + Sbjct: 574 EWLMQLISVVPTDSR----ALSKLGELHDSEGDKS-QAFQYYYESYRYFPSNIEVIEWLG 628 Query: 218 ANYSDAEHAEEAMARLVEA-----------------YVALALMDEAREVVSLIQERYPQG 260 A Y D + E+A+ A + +A + I +++P+ Sbjct: 629 AYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHKKFPEN 688 >gi|166713249|ref|ZP_02244456.1| hypothetical protein Xoryp_17860 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 605 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 9/111 (8%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 ++ + VC L + + D L D Q+ + + V ++ +F+ A + Sbjct: 324 FRRRAVVAVLAMVCVLPFAQSARAADGTLWQRADQLQQQRL-DAGVQAYRKGDFAAAQKA 382 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 F + L G+Y A + + Q+P ++ Sbjct: 383 FEAVP--------TDEGLYNLGNALARQGQYDAAIDAYDRALKQHPNQQDA 425 >gi|258510428|ref|YP_003183862.1| Tetratricopeptide TPR_2 repeat-containing protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477154|gb|ACV57473.1| Tetratricopeptide TPR_2 repeat protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 587 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 47/110 (42%), Gaps = 11/110 (10%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + FL+ F A E+ Q P + +A ++ L A+ Y G+Y +A ++ E + Sbjct: 168 QDGRYFLENGQFEVAVEWLEQVVAADP-SHIAARNNLSLAY--YYTGQYDKALAMAESVL 224 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + P++ L + ++ D+ + ++ + +++ + + Sbjct: 225 ERQPDN--------LHALCNRALLLQHFGDEDRLRRAVEPLQKVIPLHPD 266 Score = 36.6 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 82/217 (37%), Gaps = 33/217 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +E+ + FL+ + ++A + F + P V A V G ++ + L Y Sbjct: 30 FERGMRFLQRNDLARAVKAFQRTVEYEPDNPVN---YCNLAGVLAELGDFEASNELL-HY 85 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + ++ ++ ++ + +YA + +++ R ++ + Y A Sbjct: 86 VLEH-MDPHMSECWFYLANNYANL--------GDYDAAEEHLLRYLDLDPDGEYAAEAEE 136 Query: 181 YVTVGRNQLAA-----------------KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 +++ ++ + ++ GRY+L+ G++ A+ + V+A D Sbjct: 137 MLSILIDEFGGGRALERRRREEARAETMQAIQDGRYFLENGQFEVAVEWLEQVVAA--DP 194 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 H A L AY D+A + + ER P Sbjct: 195 SHIA-ARNNLSLAYYYTGQYDKALAMAESVLERQPDN 230 >gi|237802976|ref|YP_002888170.1| hypothetical protein JALI_5501 [Chlamydia trachomatis B/Jali20/OT] gi|237804898|ref|YP_002889052.1| hypothetical protein CTB_5501 [Chlamydia trachomatis B/TZ1A828/OT] gi|231273198|emb|CAX10111.1| putative exported protein [Chlamydia trachomatis B/TZ1A828/OT] gi|231274210|emb|CAX11004.1| putative exported protein [Chlamydia trachomatis B/Jali20/OT] Length = 318 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 51/165 (30%), Gaps = 22/165 (13%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++ +Y K L + +S+A + + S FP ++ +S + A + Sbjct: 158 EEIVTAPSDADLKASALYAKGALLFARKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKI 217 Query: 104 Q--------YSAGKYQQAASLGEEYITQYPESK----------NVDYVYYLVGMSYAQMI 145 Y+ Q A Q+P ++ Y Sbjct: 218 HCLQALQEPYNEQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAY---ASCLYSTG 274 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 R ++A+ Y S +E + ++ YV + Q++ Sbjct: 275 RFYEKKRKAS-SAKIYYSIALENFPDTSYVAKCNKRLERLSKQMS 318 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 57/149 (38%), Gaps = 6/149 (4%) Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 A+ +LL ++ +Y +A ++ Q+P + L+ + PY+ Sbjct: 175 YAKGALL------FARKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 ++ + + + +++ N P Y+ A+ GR+Y K+ + +A Sbjct: 229 EQYLQDARMNAAALRKQHPNHPSNTEVENYIHHMCEAYASCLYSTGRFYEKKRKASSAKI 288 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + + L N+ D + + RL + Sbjct: 289 YYSIALENFPDTSYVAKCNKRLERLSKQM 317 Score = 35.5 bits (81), Expect = 7.2, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 81/261 (31%), Gaps = 43/261 (16%) Query: 23 ALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYF 80 AL +F + C+ + R + ++ E+Y E + + + F +A F Sbjct: 7 ALCLFLVLPCGCYARVPSFEPFRGAIAPNRYTPKHSPELYFEMGDKYFQAKKFKQALLCF 66 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VY 134 + FP + K+ + G A +Y + +Y + Sbjct: 67 GMITHHFPEHALHPKAQFLVGLCYLEMGHPDLADKALTQYQEL----ADTEYSEQLFAIK 122 Query: 135 YLVGMSYAQMIR-------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 Y + S+A R P +A L+ IV A + Sbjct: 123 YSIAQSFANGKRKNILPLEGFPKLLKADTDALRIFEEIVTA------PSDADLKASALY- 175 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA---------MARLVEAYV 238 A + R EY AI + V + + E+ + L E Y Sbjct: 176 --AKGALLFA-----RKEYSEAIKTLKKVSLQFPSHSLSPESFTLIAKIHCLQALQEPYN 228 Query: 239 ALALMDEAREVVSLIQERYPQ 259 + +AR + +++++P Sbjct: 229 E-QYLQDARMNAAALRKQHPN 248 >gi|325695460|gb|EGD37360.1| hypothetical protein HMPREF9383_0391 [Streptococcus sanguinis SK150] Length = 412 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 26/206 (12%), Positives = 69/206 (33%), Gaps = 28/206 (13%) Query: 76 AYEYFNQCSRDFPFAG-VAR---KSLLMSAFVQYSAGKYQQAASLGEEYITQY---PESK 128 A + FP + +A K L+ + + + ++ + P S+ Sbjct: 158 AADKLQALHEQFPDSRDIAESFAKILVNL---SAEQSELNELKATVDKLQVLHEHFPNSR 214 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ + ++ + + + AT L + E + +SP + + + + Sbjct: 215 DIAEAFAMI-LFNLSAEQSELNEPEATVEQLHALH---EDFPDSPNIAESFA-MILVNLS 269 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA----MARLVEAYVALALMD 244 + E+ E A + + Q + Y D+ E+ + L L + Sbjct: 270 VEQSELN---------ELKATVDKLQALHEQYPDSPDIAESFAKILVNLSVEQSELNEPE 320 Query: 245 EAREVVSLIQERYPQGYWARYVETLV 270 A + + + E++P + ++ Sbjct: 321 VAVDKLQALHEKFPDSRYIAESFAMI 346 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 20/157 (12%), Positives = 55/157 (35%), Gaps = 29/157 (18%) Query: 116 LGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL---MLQYMSRIVERY 169 ++ + P+S+++ S+A ++ ++ +Q + + E++ Sbjct: 117 AADKLQALHEQFPDSRDIAE-------SFAMILFNLSLEQSGLNEQEVAADKLQALHEQF 169 Query: 170 TNSPYVKGARFYVTVGRNQLAA-KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 +S + + + N A E+ E A + + Q++ ++ ++ E Sbjct: 170 PDSRDIAESFAKI--LVNLSAEQSELN---------ELKATVDKLQVLHEHFPNSRDIAE 218 Query: 229 A----MARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A + L L + E + + E +P Sbjct: 219 AFAMILFNLSAEQSELNEPEATVEQLHALHEDFPDSP 255 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 54/148 (36%), Gaps = 30/148 (20%) Query: 124 YPESKNVD--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 YPES+++ Y L+ +S ++ ++ K + + + E + NS + + Sbjct: 46 YPESEDIALGYAIILMILS----VKKPELNE--LKATVDKLQALHEHFPNSRDIAESFAK 99 Query: 182 VTV---GRNQ-LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE--AMARLVE 235 + + L +E+ A + Q + + D+ E AM Sbjct: 100 ILFNLSLKQSGLNEQEI--------------AADKLQALHEQFPDSRDIAESFAMILFNL 145 Query: 236 AYVALALMDE--AREVVSLIQERYPQGY 261 + L ++ A + + + E++P Sbjct: 146 SLEQSGLNEQEVAADKLQALHEQFPDSR 173 >gi|288927358|ref|ZP_06421205.1| tetratricopeptide repeat protein [Prevotella sp. oral taxon 317 str. F0108] gi|288330192|gb|EFC68776.1| tetratricopeptide repeat protein [Prevotella sp. oral taxon 317 str. F0108] Length = 385 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 62/159 (38%), Gaps = 11/159 (6%) Query: 7 RAICIFEAWAYQLYKFAL-----TIFFSIAVCFLVGWER-QSSRDVYLDSVTDVRYQREV 60 R + I + + L + ++ +G + ++ + ++ ++ Sbjct: 98 RCLTIAGLVLHNVDAIVLNSQSSPLLLGLSAIQRLGRVTLRGNKLILTNNKHVSISAVKI 157 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ +++ Q++ +A + ++ + V L + + ++ + G + Sbjct: 158 RDEVSTYMRSQDYRQAIKLLHELENND---SVNENDLFNLIECYVNMKDFNKSLACGNSW 214 Query: 121 ITQYPES--KNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 I Y S ++V VYY +G+SY ++ D+R + Sbjct: 215 IALYGSSWGQHVSDVYYYLGVSYMELKDFHEADKRFAEA 253 >gi|217032338|ref|ZP_03437834.1| hypothetical protein HPB128_132g36 [Helicobacter pylori B128] gi|216946004|gb|EEC24618.1| hypothetical protein HPB128_132g36 [Helicobacter pylori B128] Length = 791 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 176 PLLTTKGYDLNAYLEAKKQIDSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 235 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP N+ Y V + + K ++Y RI+ Sbjct: 236 IKKSLLIDIGTKWIKNYPTDPNIPEALYYVAKALDEN--------NNYKQAMRYYKRILL 287 Query: 168 RYTNSPYVKGARFYVTV 184 Y NS Y A+ + + Sbjct: 288 EYKNSRYAPLAQMRLAI 304 Score = 43.2 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 205 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPNIPEALYY 264 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 265 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 303 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 16/47 (34%) Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + NY + EA+ + +A +A I Y +A Sbjct: 249 IKNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYKNSRYA 295 >gi|194225856|ref|XP_001917215.1| PREDICTED: similar to tetratricopeptide repeat domain 16 [Equus caballus] Length = 835 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 42/124 (33%), Gaps = 27/124 (21%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFP----FAGVARKSLLMSAFVQYSAGKYQQA 113 RE Y + L+++++ A +F++ P F A ++ G + A Sbjct: 62 REHYYRGQRCLEQEDWEMAVLFFSRALHLDPRLVDF--YALRAE-----AYIQLGDFSSA 114 Query: 114 ASLGEEYITQYPESKNVDY------VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 I+ P +N DY V YL G + Q + + L S+ E Sbjct: 115 IQNLRRAISFQP--ENTDYLERLSFVLYLQGQCLFE--------QCSFRDALNVFSQASE 164 Query: 168 RYTN 171 Sbjct: 165 LQPE 168 >gi|167948882|ref|ZP_02535956.1| hypothetical protein Epers_21162 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 473 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 9/115 (7%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDS-----VTDVRYQREVYEKAVLFLKEQNFSKAY 77 +L + IA+ GW + ++ D + ++ Y + V + +++ A Sbjct: 8 SLLLVSLIALPLQAGWFQNQEQEAEADYRQGHYESAAEKFQDPYRRGVAKYRSGDYASAE 67 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 F Q R+ V + + G + A +E ++Q P+ ++ Y Sbjct: 68 SEFAQVERE----SVKLDAEYNLGNARLQQGNLEGAIQAYQEVLSQQPDHEDASY 118 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 42/125 (33%), Gaps = 29/125 (23%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A ++ ++ A E F R +Y +G Y A S E+ Sbjct: 29 QEAEADYRQGHYESAAEKFQDPYRR--------------GVAKYRSGDYASAES---EFA 71 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 ES +D Y +G + Q Q + +Q ++ + + A + Sbjct: 72 QVERESVKLD-AEYNLGNARLQ--------QGNLEGAIQAYQEVLSQQPDHE---DASYN 119 Query: 182 VTVGR 186 + + R Sbjct: 120 LALAR 124 >gi|148264413|ref|YP_001231119.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4] gi|146397913|gb|ABQ26546.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens Rf4] Length = 860 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 94/287 (32%), Gaps = 75/287 (26%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT--------------------DVRYQR 58 +YK I +I + + G ++ ++Y V D Y Sbjct: 1 MYK---VIIIAIVLFNIAGCSGKTKEELYAKGVKQINDGNPNGAIVFLKNALEKDQNYLD 57 Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y+ A ++ + +A + F + R P + + +L A + S+ K A Sbjct: 58 ARYQLAKAYVAAVKYEQAEKEFQKVLRQNP-SR--VEIMLDLARIYNSSKKPDLAIDAMG 114 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN------- 171 +Y+ + +S ++G+ YA R Y+ + ++ Sbjct: 115 KYLKSHQQSSE---ALEIMGIGYALKNR--------LDEAENYLLQALKADPRRSGAKLD 163 Query: 172 --SPYV-----KGARFYVTVGRN----------QLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 Y+ K AR + LA E +G + A+ +Q Sbjct: 164 LAGIYIACGREKDARQRLDEIIKVDPKSSRAYYMLAGLENSVG----NKDR---ALEIYQ 216 Query: 215 LVLA--NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +L + + A+ + Y+ +D+A ++ + + + YP Sbjct: 217 TILKINKFDTS-----AIYKSGLIYIDKGELDKAEKLAAHLLQNYPN 258 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 15/111 (13%), Positives = 37/111 (33%), Gaps = 15/111 (13%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y+ ++++ + KA + +++P + L Y Y +A + + Sbjct: 229 IYKSGLIYIDKGELDKAEKLAAHLLQNYPNRADGNR--LKGLVCYYK-KNYTEAIAALQN 285 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + P + YY +G+S + L I++ Sbjct: 286 SLRTQPNME----AYYFLGLSLYNR--------GEFENALSQFRIILDYNP 324 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 11/89 (12%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 K ++L+E+ + A + F+ P + + + + V + +A + +IT Sbjct: 603 KGRIYLQEKKYKDAIKVFDDIEAISP--DLGFRLKIDTCVV---MKDFSKAVAQARRFIT 657 Query: 123 QYPESKNVDYVY-YLVGMSYAQMIRDVPY 150 P S Y Y+V S + +V + Sbjct: 658 IKPNS-----AYGYMVLASVYERQNNVDH 681 >gi|297181013|gb|ADI17214.1| soluble lytic murein transglycosylase and related regulatory proteins (some contain lysm/invasin domains) [uncultured delta proteobacterium HF0070_10I02] Length = 693 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 34/254 (13%), Positives = 66/254 (25%), Gaps = 53/254 (20%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 L DV + + A + L + A + P + + ++ A Sbjct: 131 AELPKPDDVDPGQVRWLLAQVALAQGRDEAAQRQWESLWALNPTSAYSDQAEEELADAGL 190 Query: 106 S-AGKYQQAASLGEEYIT----QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 Q+ L I Y Y +S Q + + + Sbjct: 191 KILPNKQRGIDLITSRIRSLEKLY---------RYREALSLRQQLPTDHRLREPHRFAAA 241 Query: 161 YMS----------------------------RIVERYTNS-----PYVKGARFYVTVGRN 187 ++ S Y+ Sbjct: 242 VFKAKDYARATNLLGALSNRSADEDILLALAQVRSGDPESSMRTYRYIAKGSGSTAE--- 298 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 LA ++ G + +G++ AI F L Y +HA+ A+ A + +AR Sbjct: 299 -LAKYKL--GYMHWDQGQWSDAIQSFADYLIAYPTGKHADSALWFTAMAQMRFGANAQAR 355 Query: 248 EVVSLIQERYPQGY 261 + +Q +P+ Sbjct: 356 NTLERLQSEHPRSS 369 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 2/102 (1%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSR 85 +A+ + + +SS Y E+ Y+ + + +S A + F Sbjct: 267 ILLALAQVRSGDPESSMRTYRYIAKGSGSTAELAKYKLGYMHWDQGQWSDAIQSFADYLI 326 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 +P A +L +A Q G QA + E +++P S Sbjct: 327 AYPTGKHADSALWFTAMAQMRFGANAQARNTLERLQSEHPRS 368 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 43/152 (28%), Gaps = 37/152 (24%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRD------------------------FPF-----AGVAR 94 A K +++++A S + + A Sbjct: 239 AAAVFKAKDYARATNLLGALSNRSADEDILLALAQVRSGDPESSMRTYRYIAKGSGSTAE 298 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 + ++ + G++ A +Y+ YP K+ D + M+ + A Sbjct: 299 LAKYKLGYMHWDQGQWSDAIQSFADYLIAYPTGKHADSALWFTAMAQMRF--------GA 350 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + R+ + S GA +++ Sbjct: 351 NAQARNTLERLQSEHPRSSLKIGAAYWLAKLH 382 >gi|225024246|ref|ZP_03713438.1| hypothetical protein EIKCOROL_01118 [Eikenella corrodens ATCC 23834] gi|224943271|gb|EEG24480.1| hypothetical protein EIKCOROL_01118 [Eikenella corrodens ATCC 23834] Length = 209 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 5/91 (5%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L +A GW SS +++ V+++ + ++A + Q Sbjct: 26 LFALLVVAAIGYFGWVMYSSHQRSVNN-----EAVAVFDQWAENQQANKPAEAAKLLTQL 80 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 +P + A ++ LM A + GKY +A Sbjct: 81 QSQYPTSISAAQATLMQAGAAFDQGKYDEAI 111 >gi|160902985|ref|YP_001568566.1| TPR repeat-containing protein [Petrotoga mobilis SJ95] gi|160360629|gb|ABX32243.1| Tetratricopeptide TPR_2 repeat protein [Petrotoga mobilis SJ95] Length = 358 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 68/193 (35%), Gaps = 36/193 (18%) Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV-YYLVGMSYAQMIRDVP 149 +L + ++ G+Y++AA + ++ I P + YV Y+++ +Y Q Sbjct: 163 PWNIAALSELGELYFNLGEYEKAAEIWKKEIELSPNN----YVTYFMIADAYMQK----- 213 Query: 150 YDQRATKLMLQYMSRIVERYTNS---PY-----------VKGARFYVTVGRNQLAAKEVE 195 + + + + R+ NS Y A N + Sbjct: 214 ---GDYEKAAHILEKFLNRFPNSVLGKYELSTIYEKLSRTTEANELKEEILNTTPEYSTD 270 Query: 196 I---GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 I + + G+Y + + + EH + LV Y+ + +EA+ + Sbjct: 271 IEVWAKVMFENGKYKEVQNFLEKYIDQDKENEHFK---LLLVIPYLKVKKFEEAKSIYQE 327 Query: 253 IQERYPQGYWARY 265 I+++Y W Y Sbjct: 328 IKDKY---MWYIY 337 Score = 40.9 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 3/75 (4%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + E L+ + KA E + + P V M A G Y++ Sbjct: 162 DPWNIAALSELGELYFNLGEYEKAAEIWKKEIELSPNNYVT---YFMIADAYMQKGDYEK 218 Query: 113 AASLGEEYITQYPES 127 AA + E+++ ++P S Sbjct: 219 AAHILEKFLNRFPNS 233 >gi|300869841|ref|YP_003784712.1| putative TPR-repeat-containing protein [Brachyspira pilosicoli 95/1000] gi|300687540|gb|ADK30211.1| putative TPR-repeat-containing protein [Brachyspira pilosicoli 95/1000] Length = 406 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 40/122 (32%), Gaps = 9/122 (7%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 D +++ A +++ A +N +P + A S + Y Sbjct: 194 EDNSEVALLFKSAEELKNMKDYDNAISSYNNVISQYPDSKYAVYSYFRVGDIYNLKKDYT 253 Query: 112 QAASLGEEYITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A ++ + N Y +G+ V + + ++Y + ++ +Y Sbjct: 254 NAFDTYKKASELKTANNNQKAAALYSMGV--------VRKVENNNQEAMKYFNDVIAKYP 305 Query: 171 NS 172 N+ Sbjct: 306 NT 307 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 54/161 (33%), Gaps = 22/161 (13%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 + L + + + +Y V+ E N +A +YFN +P ++ A Sbjct: 260 KKASELKTANNNQKAAALYSMGVVRKVENNNQEAMKYFNDVIAKYPNTYSYGNAVYEIAD 319 Query: 103 VQYSAGK-------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 GK +++ + E++ SK D L+ Y +V R Sbjct: 320 SLKQMGKISDGLNMLEKSLASKEKF------SKRAD-AMLLLAEIYETGNNNV----RDF 368 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 ++ + Y N+ K A +N L+ V I Sbjct: 369 NKAYLTYNQYLSEYPNTSKTKYANDR----KNFLSRNAVNI 405 >gi|186681554|ref|YP_001864750.1| hypothetical protein Npun_R1081 [Nostoc punctiforme PCC 73102] gi|186464006|gb|ACC79807.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC 73102] Length = 722 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 18/149 (12%), Positives = 46/149 (30%), Gaps = 42/149 (28%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + +++ K++++ KA F P +++ +Y+ Y+ A + Sbjct: 453 DYFQQGDAAYKDRDYEKAIASFTAAIEQQPTH---TTAIVNRGNARYNLKDYEGAVTDYS 509 Query: 119 EYITQYPE--------------------SKNVDY-------------------VYYLVGM 139 + + P + +Y Y G+ Sbjct: 510 QALKINPNQTKALVNRGNARYMLAEYSNDPDTEYNLAIADYNRAIGLDKNEIEAYIRRGI 569 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVER 168 QM + Q+A K + +++++R Sbjct: 570 VRTQMAKYSGESQQAYKRAIADFTQVIKR 598 >gi|199559777|ref|NP_035285.2| serine/threonine-protein phosphatase 5 [Mus musculus] gi|148710114|gb|EDL42060.1| protein phosphatase 5, catalytic subunit [Mus musculus] Length = 499 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 50/166 (30%), Gaps = 34/166 (20%) Query: 40 RQSSRDVYLDSVTDV---RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VAR 94 R + D + E+ +A + K +++ A ++++Q P Sbjct: 8 RTECAETPRDEPPADGTLKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPGNAIYYGN 67 Query: 95 KSLLMSAF----VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 +S A+ Y+ G +A L ++YI YY S + Sbjct: 68 RS---LAYLRTECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL----- 109 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + L+ +V+ N A+ + K E Sbjct: 110 ---GKFRAALRDYETVVKVKPNDK---DAKMKYQECSKIVKQKAFE 149 >gi|90408528|ref|ZP_01216685.1| Tol system periplasmic component YbgF [Psychromonas sp. CNPT3] gi|90310347|gb|EAS38475.1| Tol system periplasmic component YbgF [Psychromonas sp. CNPT3] Length = 242 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 22/127 (17%) Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 +Y+QA +E+IT YP+S + Y +G + ++ + Q + Sbjct: 135 NKEYKQAIVAFDEFITTYPKSNYIANAQYWLGQLLYK--------EKQREKARQAFLVVT 186 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + + S A F + + L +A +Q V+ Y+D+ A Sbjct: 187 QEHLTSNKRADALFKIGIIDEYLGKN--------------ASAKIFYQKVIQEYADSSAA 232 Query: 227 EEAMARL 233 + A RL Sbjct: 233 KLATQRL 239 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 15/135 (11%), Positives = 49/135 (36%), Gaps = 15/135 (11%) Query: 55 RYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 +++ Y+K+V L + + +A F++ +P + + + Y + ++A Sbjct: 119 PNEKDAYQKSVNLVLVNKEYKQAIVAFDEFITTYPKSNYIANAQYWLGQLLYKEKQREKA 178 Query: 114 ASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 ++ ++ S + +G+ + ++ + ++++ Y Sbjct: 179 RQA---FLVVTQEHLTSNKRADALFKIGIIDEYLGKNAS--------AKIFYQKVIQEYA 227 Query: 171 NSPYVKGARFYVTVG 185 +S K A + Sbjct: 228 DSSAAKLATQRLNSL 242 >gi|296125516|ref|YP_003632768.1| response regulator aspartate phosphatase containing TPR repeat domain protein [Brachyspira murdochii DSM 12563] gi|296017332|gb|ADG70569.1| response regulator aspartate phosphatase containing TPR repeat domain protein [Brachyspira murdochii DSM 12563] Length = 148 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 8/97 (8%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 +F I V L SV + RY + + EKA +N+ A Y+ Sbjct: 9 FVFLVILVFLLASCAS-----AVKISVEEERYPKIIAEKAYTEFGNKNYKTAIAYYQYII 63 Query: 85 RDF---PFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +F ++ + F Y KY++A + + Sbjct: 64 DNFDRENYSKDVAWAYYEIGFCYYYQNKYEEALTYFD 100 >gi|262195711|ref|YP_003266920.1| hypothetical protein Hoch_2491 [Haliangium ochraceum DSM 14365] gi|262079058|gb|ACY15027.1| Tetratricopeptide repeat protein [Haliangium ochraceum DSM 14365] Length = 1155 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 70/216 (32%), Gaps = 43/216 (19%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNF--SKAYEYFNQCSRDFPFAGVARKSLLMSA-- 101 + D ++ A L+ ++Q + +A + + A+ + SA Sbjct: 90 IEDTDPDDPERPDLLFRLAELYAQQQRYWRFRAMDLHAEIDA-------AKTAKEKSALK 142 Query: 102 ---FVQYSAGKYQ--QAASLGEEYITQYPES---KNVDYVYYLVGMSYAQMIRDVPYDQR 153 + A K A + + I P + +D Y YA +++ Y Sbjct: 143 QKQDQYFKASKTALLSAVKVYKS-IADDPRNRNYPRMDEALYY----YAYTLQNAEY--- 194 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 K Q ++++ Y NS Y+ A + YY + A + Sbjct: 195 -AKEARQVFHKLIKDYPNSKYIPDAY--------------LAFADYYFAQNSLANAEQFY 239 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 VL + +A A+ + Y+ L +A E Sbjct: 240 DKVLQ-FPEARVYNFALYKKGWVYLNLDRSQDALET 274 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 52/151 (34%), Gaps = 14/151 (9%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 +V+ D+ +Y V + + ++ A + F + FP A +K++ + Sbjct: 691 EVFNDNSEAEDAPIILYNAGVCYEQGRSLGAAIQMFTFLTNFFPDANETKKAIARLGYNF 750 Query: 105 YSAGKYQQAASLGEEYITQYPESKNV-----DYVYYLVGMSYAQM--------IRDVPY- 150 Y+QAA EEY ++ N D V+Y G+ IR Sbjct: 751 AQVAYYRQAAERLEEYARRFGGEDNAHKALWDAVFYRKGVGDDDQAIEDTKFFIRQYGRK 810 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + M+ I E+ +S + Sbjct: 811 KPTEAADAMWSMTSIYEKRGDSEEIIDHLQR 841 Score = 35.5 bits (81), Expect = 7.7, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 42/140 (30%), Gaps = 28/140 (20%) Query: 156 KLMLQYMSRIVE-RYTNSPYVKGARFYVTVGRNQLAAK----------EVEIGRY----- 199 K +Q + ++E + P F + Q E++ + Sbjct: 80 KEQIQQFALLIEDTDPDDPERPDLLFRLAELYAQQQRYWRFRAMDLHAEIDAAKTAKEKS 139 Query: 200 --------YLK--RGEYVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAYVALALMDEAR 247 Y K + ++A+ ++ + + + +EA+ EAR Sbjct: 140 ALKQKQDQYFKASKTALLSAVKVYKSIADDPRNRNYPRMDEALYYYAYTLQNAEYAKEAR 199 Query: 248 EVVSLIQERYPQGYWARYVE 267 +V + + YP + Sbjct: 200 QVFHKLIKDYPNSKYIPDAY 219 >gi|119628677|gb|EAX08272.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_g [Homo sapiens] gi|194374639|dbj|BAG62434.1| unnamed protein product [Homo sapiens] Length = 805 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 409 QKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 468 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 469 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 521 Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157 ++ + +N V Y + Y Q++ +P D + Sbjct: 522 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 581 Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196 QY + ++ + + A Y + + ++ + Sbjct: 582 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 641 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + + G Y A+ ++ + + E + LV L L D A+E ++ Sbjct: 642 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 696 Score = 35.5 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 65/222 (29%), Gaps = 67/222 (30%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KAV +L+++++++A E + V + + + Y + QA+S Sbjct: 401 NKAVTYLRQKDYNQAVEILKVLEKKD--NRVKSAAATNLSALYYMGKDFAQASSYADIAV 458 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 459 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 514 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y Sbjct: 515 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 550 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AI V++ +++L E Y +A + Sbjct: 551 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 589 >gi|56118654|ref|NP_001007891.1| protein phosphatase 5, catalytic subunit [Xenopus (Silurana) tropicalis] gi|51258924|gb|AAH80162.1| ppp5c protein [Xenopus (Silurana) tropicalis] Length = 493 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 44/141 (31%), Gaps = 25/141 (17%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYS 106 +++ + E+ E+A + + +++ +A +Y+ Q P +SL Sbjct: 14 PTISREKTAEELKEQANEYFRVKDYDRAVQYYTQAIGLSPDTAIYYGNRSL-----AYLR 68 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y A + I + Y+ YY S + K L+ Sbjct: 69 TECYGYALADASRAIQL-----DAKYIKGYYRRAASNMAL--------GKLKAALKDYET 115 Query: 165 IVERYTNSPYVKGARFYVTVG 185 +V+ + A+ Sbjct: 116 VVKVRPHDK---DAQMKFQEC 133 >gi|254417207|ref|ZP_05030952.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196176013|gb|EDX71032.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 260 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 90/275 (32%), Gaps = 41/275 (14%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + KF I ++ +V + Q + + V + + A + ++ ++ A Sbjct: 1 MIKFPNHIPAALIGTAIVWVQPQFAVALTNLVVAQQPTVQNLINSARIKAEKGDYQGAIA 60 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 Q + + +S A Y YQ A + + I P+ YY G Sbjct: 61 DLTQALQL---SPNNAESYHRRANAYYQLENYQGAIADYNQAIQLNPDDVK---AYYNRG 114 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYVKGARFYVTVGRNQ--LAAK-- 192 ++++ + + + ++ ++ + + Y +G +Q +A Sbjct: 115 ITHSHL--------GDYQGAIADFNQAIQLNPDFAAAYYNRGLARFNLGDDQGAIADYNQ 166 Query: 193 ------EVEIGRYYLKR-------GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + I Y R G+ AI F + D + AY+ Sbjct: 167 AIKLNPDYAIA--YNNRGVARSNLGDDQGAIADFNQAIQRNPDNANVY---YNRGVAYLN 221 Query: 240 LALMDEARE---VVSLIQERYPQGYWARYVETLVK 271 L +A E + + ++ +Y++ +++ Sbjct: 222 LGDQPKALEDFRQAATLFQQQGNTEIYQYIQQIIR 256 >gi|91772658|ref|YP_565350.1| TPR repeat-containing protein [Methanococcoides burtonii DSM 6242] gi|91711673|gb|ABE51600.1| Tetratricopeptide repeat protein [Methanococcoides burtonii DSM 6242] Length = 1049 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 17/111 (15%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + L F +A F +R E+ V + + KA E Sbjct: 6 FSLLLISFIILASSFPAQCMGYDARSFN--------------EEGVALMLNGTYDKAIEK 51 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 ++ P +A + A QY G Y +A + + + P S + Sbjct: 52 YDLALVSDPNYRIALE---NKAAAQYLYGDYDEAIATYDHILKLQPGSPLI 99 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 62/209 (29%), Gaps = 34/209 (16%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D Y+ + A K N+ A + ++ P + +LL G Y+ Sbjct: 697 DSSYKDAWFALAQNVYKSSNYYYAIQAYDGLLNLDPEN---KTALLQKGQAYDKIGIYRS 753 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + + + + ++ +YL G++ + + + +++ + Sbjct: 754 SLASYNKLLKVDTDNTE---AWYLRGLASYNL--------GNLEDAVYSYDKVLSSDPQN 802 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 V A+ V G + +I + VL D + + Sbjct: 803 IDVLLAQSLVLE-----------------DLGLFEDSINNYDKVLEMKVDDPSV---LMK 842 Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGY 261 Y L L +A + ++ P Sbjct: 843 KGNVYEKLGLYKDANDCYDIVLINEPANS 871 Score = 35.5 bits (81), Expect = 8.6, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 34/90 (37%), Gaps = 7/90 (7%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 L G ++ L V+D Y+ + KA ++ +A ++ + P + Sbjct: 38 ALMLNGTYDKAIEKYDLALVSDPNYRIALENKAAAQYLYGDYDEAIATYDHILKLQPGSP 97 Query: 92 --VARKSLLMSAFVQYSAGKYQQAASLGEE 119 +K ++++ G Y+ A ++ Sbjct: 98 LIFTKKGMVLA-----KKGDYENAIKTYDK 122 >gi|110635498|ref|YP_675706.1| tetratricopeptide TPR_2 [Mesorhizobium sp. BNC1] gi|110286482|gb|ABG64541.1| Tetratricopeptide TPR_2 [Chelativorans sp. BNC1] Length = 334 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 50/141 (35%), Gaps = 14/141 (9%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 L G + + + ++ E+Y+ + F+ ++ A F Q FP A Sbjct: 187 LLRGTPTGGTDNAVVAALPHSNNPEEIYQSSYQFILSGDYKTAEAGFRQYLDMFPEGEHA 246 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 + +Y++A E ++ Q+P + + +G+S A M + Sbjct: 247 ADANFWLGEAMLGQDRYREA---AEVFLNANRQFPNASKSPEMLLKLGVSLAAMQQ---R 300 Query: 151 DQRATKLMLQYMSRIVERYTN 171 D + + I RY + Sbjct: 301 D-----VACATYTEIGHRYPD 316 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 36/120 (30%), Gaps = 19/120 (15%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S Q I Y K + ++ + + A F++ L Sbjct: 216 SSYQFILSGDY-----KTAEAGFRQYLDMFPEGEHAADANFWLGEA--MLGQ-------- 260 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y A F + +A + E + +L + A+ D A + I RYP Sbjct: 261 ----DRYREAAEVFLNANRQFPNASKSPEMLLKLGVSLAAMQQRDVACATYTEIGHRYPD 316 >gi|222054405|ref|YP_002536767.1| chromosome segregation ATPase-like protein [Geobacter sp. FRC-32] gi|221563694|gb|ACM19666.1| chromosome segregation ATPase-like protein [Geobacter sp. FRC-32] Length = 1013 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 1/73 (1%) Query: 190 AAKEVEIGRYY-LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 A ++ I + ++ +Y + + +L +Y D + A+ L A EA Sbjct: 35 ADSQLFITGFNAYQKKDYQTTVDKMGTLLKSYPDTPLRDMAIFWLARANYKAGHKQEAAR 94 Query: 249 VVSLIQERYPQGY 261 ++ + YP Sbjct: 95 YMAQFFKEYPDSP 107 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 30/74 (40%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 +++ +++++ + + +P + ++ A Y AG Q+AA Sbjct: 34 SADSQLFITGFNAYQKKDYQTTVDKMGTLLKSYPDTPLRDMAIFWLARANYKAGHKQEAA 93 Query: 115 SLGEEYITQYPESK 128 ++ +YP+S Sbjct: 94 RYMAQFFKEYPDSP 107 >gi|301167731|emb|CBW27315.1| putative membrane protein [Bacteriovorax marinus SJ] Length = 237 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 1/80 (1%) Query: 51 VTDVRYQREVYEKAVLFLKEQN-FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T + +++ V + N + A F + +P + R S L A G Sbjct: 140 PTKKMDDQFLFQAGVAAFESGNHYDWAITNFEKLVEAYPTSEFYRGSKLWMALANLKIGN 199 Query: 110 YQQAASLGEEYITQYPESKN 129 + S EE+ +Y + Sbjct: 200 EDKFFSAAEEFRKKYRNTPE 219 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 + +L A ++S ++++A + Y Q+P K D + G++ + + Sbjct: 106 KWTPEQMLAVAKKEFSLKNFEKSAQFFDTYKHQFPTKKMDDQFLFQAGVAAFESGNHYDW 165 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 + ++VE Y S + +G++ ++ + ++IG ++ +A Sbjct: 166 -------AITNFEKLVEAYPTSEFYRGSKLWMALAN-------LKIG----NEDKFFSAA 207 Query: 211 PRFQLVLANYSDAE 224 F+ Y + Sbjct: 208 EEFR---KKYRNTP 218 >gi|326528157|dbj|BAJ89130.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 698 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 46/153 (30%), Gaps = 27/153 (17%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF----PFAGV-------ARKSL-LMSAF 102 ++ KE A + + R++ P +R SL L A Sbjct: 471 EEADKIKNTGNRLFKEGKLELAKAKYEKLLREYNHVHPQDDEEGKIFANSRSSLHLNVAA 530 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 G+Y+++ + + P Y GMSY +D Sbjct: 531 CYRKMGEYRKSIEACNKVLDANPVHVK---ALYRRGMSYML---GGDFD-----DAKNDF 579 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 ++V +S A + + + +E+E Sbjct: 580 EKMVTIDKSSE--PDATAALVKLKQK--EQEIE 608 >gi|326511970|dbj|BAJ95966.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 697 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 46/153 (30%), Gaps = 27/153 (17%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF----PFAGV-------ARKSL-LMSAF 102 ++ KE A + + R++ P +R SL L A Sbjct: 470 EEADKIKNTGNRLFKEGKLELAKAKYEKLLREYNHVHPQDDEEGKIFANSRSSLHLNVAA 529 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 G+Y+++ + + P Y GMSY +D Sbjct: 530 CYRKMGEYRKSIEACNKVLDANPVHVK---ALYRRGMSYML---GGDFD-----DAKNDF 578 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 ++V +S A + + + +E+E Sbjct: 579 EKMVTIDKSSE--PDATAALVKLKQK--EQEIE 607 >gi|326508644|dbj|BAJ95844.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 350 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 46/153 (30%), Gaps = 27/153 (17%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF----PFAGV-------ARKSL-LMSAF 102 ++ KE A + + R++ P +R SL L A Sbjct: 123 EEADKIKNTGNRLFKEGKLELAKAKYEKLLREYNHVHPQDDEEGKIFANSRSSLHLNVAA 182 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 G+Y+++ + + P Y GMSY +D Sbjct: 183 CYRKMGEYRKSIEACNKVLDANPVHVK---ALYRRGMSYML---GGDFD-----DAKNDF 231 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 ++V +S A + + + +E+E Sbjct: 232 EKMVTIDKSSE--PDATAALVKLKQK--EQEIE 260 >gi|300310075|ref|YP_003774167.1| lipoprotein [Herbaspirillum seropedicae SmR1] gi|300072860|gb|ADJ62259.1| lipoprotein [Herbaspirillum seropedicae SmR1] Length = 209 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 33/106 (31%), Gaps = 9/106 (8%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + ++ + L G SS+ D + KA E +A + Sbjct: 10 LVIPALLLAVLSGCANTSSKPGPEDEAKNTLESGV--AKANAAQTEGKTDEAVSVLKVVA 67 Query: 85 RDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 FP R + + + +G Y A +E + + P K Sbjct: 68 ARFPADKTPWVRIAQIR-----FDSGDYSDAIVNAQEALKRDPTDK 108 >gi|254285226|ref|ZP_04960191.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|150424498|gb|EDN16434.1| conserved hypothetical protein [Vibrio cholerae AM-19226] Length = 254 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 58/146 (39%), Gaps = 10/146 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 S+ + + + ++ Y+ AV LK+++++ A F + D+P + + + Sbjct: 118 PTSSNDEAAQGTFSSDANEQAAYQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSANAH 177 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + ++ +Y++AA ++ +K D + + D+ + Sbjct: 178 YWLGQLYFAKKEYKEAAKSFAAVVSDKGSNKRAD------ALV---KLGDIAKRNNNAEQ 228 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVT 183 ++ + V+ Y +S K A+ + Sbjct: 229 ARKFYQQAVDEYPDSASAKIAKENLK 254 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + Y NS + A +++ G+ Y Sbjct: 140 YQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSANAHYWL--------------GQLYF 185 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + EY A F V+++ + +A+ +L + ++AR+ + YP Sbjct: 186 AKKEYKEAAKSFAAVVSD-KGSNKRADALVKLGDIAKRNNNAEQARKFYQQAVDEYPDSA 244 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 245 SAKIAKENLK 254 >gi|109946831|ref|YP_664059.1| paralysed flagella protein [Helicobacter acinonychis str. Sheeba] gi|109714052|emb|CAJ99060.1| paralysed flagella protein [Helicobacter acinonychis str. Sheeba] Length = 794 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 9/136 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + +A ++ +++P + L+ G Sbjct: 180 PLLTTKGYDLNAYLEAKKQMDSQAYFEALRTISRAFKNYPQTIFKKDLYLLEIIALGKLG 239 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP N+ V Y V + + K +++ RI+ Sbjct: 240 IKKTLLIDIGTQWIKNYPADPNIPEVLYYVAKALDEN--------NNYKQAMRFYKRILL 291 Query: 168 RYTNSPYVKGARFYVT 183 Y NS Y A+ ++ Sbjct: 292 EYKNSRYAPLAQMHLA 307 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 11/99 (11%), Positives = 30/99 (30%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + D +Y Sbjct: 209 RTISRAFKNYPQTIFKKDLYLLEIIALGKLGIKKTLLIDIGTQWIKNYPADPNIPEVLYY 268 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A ++ + ++ + A + + A Sbjct: 269 VAKALDENNNYKQAMRFYKRILLEYKNSRYAPLAQMHLA 307 >gi|282895612|ref|ZP_06303746.1| hypothetical protein CRD_00245 [Raphidiopsis brookii D9] gi|281199452|gb|EFA74316.1| hypothetical protein CRD_00245 [Raphidiopsis brookii D9] Length = 461 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 27/189 (14%), Positives = 65/189 (34%), Gaps = 41/189 (21%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 ++ + + + + R+ Y + + L++ N+ ++ +Q + P A + Sbjct: 281 ATGEAPQERLNSPQSARDFYARGITKLEQFNYKESLADLDQAIKIDP--KYAE-AYFKRG 337 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-----VGMSYAQMIRDVPYDQRATK 156 + +Y++A + I P YL G +Y + D + Sbjct: 338 YALSWLRRYEEALLDFNQVIALDPN--------YLDGYLNRGWTYIWLQND--------Q 381 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L+ +R++ N Y + +A Y+K G+Y AA+ + Sbjct: 382 AALEDFNRVIRINPN--YAE------AYAHQGMA---------YIKLGKYQAALESSKQA 424 Query: 217 LANYSDAEH 225 + + + Sbjct: 425 IRLDPNKSY 433 >gi|239787482|emb|CAX83953.1| Tetratricopeptide repeat protein [uncultured bacterium] Length = 943 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 36/120 (30%), Gaps = 24/120 (20%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS-----LLMSAFVQYSAGKYQQAASLG 117 +A + + A P +AR + L A V Y G Y +A ++ Sbjct: 484 QARMAQARGDMPGAMAALELL----PETELARLANNPGHLKEVADVYYQNGNYSKALTVY 539 Query: 118 EEYITQYP----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 ++ YP S + A R + + ++ + +SP Sbjct: 540 IRFLESYPLDAARSPW--------ALLNAAQCR---RQLKQYDSARNLLKQLSREFPDSP 588 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 61/222 (27%), Gaps = 55/222 (24%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-SLLMSAFVQYSA 107 D + E+A + ++ A + NQ R + LM A + + Sbjct: 432 DPNLPKNSPEVLMERARASMGLADWENATTFLNQIFDTPAAGDYLRGWARLMQARMAQAR 491 Query: 108 GKYQQAASLGE--------EYITQYPES-KNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 G A + E + P K V VYY G Sbjct: 492 GDMPGAMAALELLPETELAR-LANNPGHLKEVADVYYQNG---------------NYSKA 535 Query: 159 LQYMSRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 L R +E Y ++ A R QL +Y +A + + Sbjct: 536 LTVYIRFLESYPLDAARSPWALLNAAQCRRQL--------------KQYDSARNLLKQLS 581 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + D+ + Y ++ L DE YP+ Sbjct: 582 REFPDSPA-----HAMGRIY-SVQLQDE--------DPNYPE 609 Score = 42.0 bits (98), Expect = 0.093, Method: Composition-based stats. Identities = 34/264 (12%), Positives = 75/264 (28%), Gaps = 72/264 (27%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA------ 113 + A ++++F+KA Y FP Y A Sbjct: 335 YFRNAQDAEQKRDFAKARAYLKSLLDVFPETPNRELV------AYYRT---TLARRMDWK 385 Query: 114 ----ASLGEEYITQYPESKNVDYV--YYLVGMSY---AQMIRDVPYDQRATKLMLQYMSR 164 + ++ +P + N + + L ++ + + +D K + + Sbjct: 386 PGWLLKEYDNFLAHFPNNFNYPKMRLWQLQALNDGGQFEAALGLMWDPNLPKNSPEVLME 445 Query: 165 -----------------IVERYTNSPYVKG--------ARFYVTVGRN----QLAAKEV- 194 + + + ++P + + R +AA E+ Sbjct: 446 RARASMGLADWENATTFLNQIF-DTPAAGDYLRGWARLMQARMAQARGDMPGAMAALELL 504 Query: 195 ----------------EIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEAMARLVEAY 237 E+ Y + G Y A+ + L +Y DA + A+ + Sbjct: 505 PETELARLANNPGHLKEVADVYYQNGNYSKALTVYIRFLESYPLDAARSPWALLNAAQCR 564 Query: 238 VALALMDEAREVVSLIQERYPQGY 261 L D AR ++ + +P Sbjct: 565 RQLKQYDSARNLLKQLSREFPDSP 588 >gi|153005970|ref|YP_001380295.1| hypothetical protein Anae109_3115 [Anaeromyxobacter sp. Fw109-5] gi|152029543|gb|ABS27311.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. Fw109-5] Length = 308 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 14/110 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q + + + V ++ P A F + E+ G Y A+ Sbjct: 189 QGNKTVARELYEQYVAQFPADPASAEAHFRLG---------ELAFGE-----RRYRDAVL 234 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 F V + + A +A+ R EA + L + +EA+ V+S + +RYP Sbjct: 235 EFGKVAREFPRSGKAPDALVRTGEAMLQLDMREEAKTVLSEVPQRYPGTP 284 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 36/127 (28%), Gaps = 22/127 (17%) Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 L A Q G A L E+Y+ Q+P ++ +G ++ + +R + Sbjct: 180 LALARAQEQQGNKTVARELYEQYVAQFPADPASAEAHFRLG--------ELAFGERRYRD 231 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + ++ + S A QL +E A V Sbjct: 232 AVLEFGKVAREFPRSGKAPDALVRTGEAMLQLDMRE--------------EAKTVLSEVP 277 Query: 218 ANYSDAE 224 Y Sbjct: 278 QRYPGTP 284 >gi|92118968|ref|YP_578697.1| TPR repeat-containing protein [Nitrobacter hamburgensis X14] gi|91801862|gb|ABE64237.1| TPR repeat protein [Nitrobacter hamburgensis X14] Length = 336 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 18/129 (13%), Positives = 29/129 (22%), Gaps = 22/129 (17%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 Y A + +YP Y +G S Q + + Sbjct: 215 EFDLGIGYMQRKDYALAEETMRNFTQKYPSDALTGDAQYWLGESLFQRQK--------YR 266 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + ++ +S A + L KE AA V Sbjct: 267 EAAEAFLGVTTKFDSSAKASDALLRLGQSLAALKEKE--------------AACAALGEV 312 Query: 217 LANYSDAEH 225 Y A Sbjct: 313 TRKYPRASA 321 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 41/110 (37%), Gaps = 14/110 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 ++ L + M ++Y + A++++ +R +Y A Sbjct: 225 RKDYALAEETMRNFTQKYPSDALTGDAQYWLGESL--------------FQRQKYREAAE 270 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 F V + + A +A+ RL ++ AL + A + + +YP+ Sbjct: 271 AFLGVTTKFDSSAKASDALLRLGQSLAALKEKEAACAALGEVTRKYPRAS 320 >gi|20141804|sp|Q60676|PPP5_MOUSE RecName: Full=Serine/threonine-protein phosphatase 5; Short=PP5; AltName: Full=Protein phosphatase T; Short=PPT gi|2407637|gb|AAB70573.1| protein phosphatase 5 [Mus musculus] gi|13277678|gb|AAH03744.1| Protein phosphatase 5, catalytic subunit [Mus musculus] Length = 499 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 50/165 (30%), Gaps = 33/165 (20%) Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARK 95 + D ++ E+ +A + K +++ A ++++Q P + Sbjct: 11 CAETPRDEPPADGA--LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPGNAIYYGNR 68 Query: 96 SLLMSAF----VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 S A+ Y+ G +A L ++YI YY S + Sbjct: 69 S---LAYLRTECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL------ 109 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + L+ +V+ N A+ + K E Sbjct: 110 --GKFRAALRDYETVVKVKPNDK---DAKMKYQECSKIVKQKAFE 149 >gi|307152867|ref|YP_003888251.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 7822] gi|306983095|gb|ADN14976.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822] Length = 846 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 35/255 (13%), Positives = 77/255 (30%), Gaps = 47/255 (18%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEK----AVLFLKEQNFSKAYEYFNQCSRDFPF 89 L W + + + ++ + Y +N++ A + +N+ P Sbjct: 342 GLTLWFTRDLSQSAQEFIHAIQQDDQFYSAWRWLGYDLFLMRNYTDALKVYNKLFEMNPK 401 Query: 90 AG---VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 + + A+ G YQ+A + + I P + Y G++Y+++ Sbjct: 402 GDFVLYTERGSV-LAYS----GHYQEAIADYNKAIELKP-HP---WAYNKRGLAYSEL-- 450 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYV----KGARFYVTVGRNQLAAKEVEI------ 196 + + ++ +E ++ Y + LA I Sbjct: 451 ------EEYQKAIADFNKTIELEPDADYAYNNRGNVYKDLKDYDKALADYNKAISYNYVG 504 Query: 197 -----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR--LVEAYVALALMDEA-RE 248 G YL EY A+ F + +E ++ Y L +A + Sbjct: 505 AYNNRGNLYLDLKEYQKALADFNKGIE-----IDSENSLLYGNRGRVYSELKDYKKAFDD 559 Query: 249 VVSLIQERYPQGYWA 263 I+ Q ++ Sbjct: 560 YSKAIEINPNQSFYY 574 >gi|162453783|ref|YP_001616150.1| hypothetical protein sce5507 [Sorangium cellulosum 'So ce 56'] gi|161164365|emb|CAN95670.1| putative membrane protein [Sorangium cellulosum 'So ce 56'] Length = 258 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 33/87 (37%), Gaps = 2/87 (2%) Query: 43 SRDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 ++ S T + E+ + A L N A + SR P ++ ++ ++ Sbjct: 160 TKLDPKPSGTGAALEAELGALDAARTMLASGNARGALSLLDAYSRTHPRGRLSLEAEVLR 219 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPES 127 +G+ A+ ++ ++P S Sbjct: 220 IDALAKSGRSDAASQRAAAFLRRHPNS 246 >gi|298207339|ref|YP_003715518.1| hypothetical protein CA2559_03770 [Croceibacter atlanticus HTCC2559] gi|83849975|gb|EAP87843.1| hypothetical protein CA2559_03770 [Croceibacter atlanticus HTCC2559] Length = 593 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 54/145 (37%), Gaps = 13/145 (8%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 +D L+ T ++ + KA L + A + + ++LL A + Sbjct: 455 KDNSLEDSTQTALKK--FAKADLLTFKGKNEAAIAVLEEILIQHKGEKIEDEALLRQANL 512 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK--LMLQY 161 A ++++A + ++ IT YP D YY G++ YD+ + Sbjct: 513 FIEAKEFEKAEANYKKIITFYPTDILGDDAYY--GLAKL-------YDEHLARPEDAKAN 563 Query: 162 MSRIVERYTNSPYVKGARFYVTVGR 186 +++ Y +S + AR R Sbjct: 564 YEKVIFDYADSIFYVDARKRYRTLR 588 >gi|310779067|ref|YP_003967400.1| TPR repeat-containing protein [Ilyobacter polytropus DSM 2926] gi|309748390|gb|ADO83052.1| TPR repeat-containing protein [Ilyobacter polytropus DSM 2926] Length = 948 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 63/187 (33%), Gaps = 29/187 (15%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 V Y + +YE + K ++KA ++ + +L A Y+ G+ Sbjct: 124 DVKSEYYDKAIYELGKEYYKSGEYNKAQTELSKLLSSK--GNYYDEGILYLALSSYNNGQ 181 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y ++ +EY E KN + Y+ G Y +M Y + Y Sbjct: 182 YVKSIVYLDEYYNGTEEDKNYPLMNYIYGSCYYKMDD--------IAKAEGYFKEVAANY 233 Query: 170 TNSPYVKGARFYVTVG-RNQLAAKEVE------------------IGRYYLKRGEYVAAI 210 + Y + + + R+ E+ + Y L +G+Y ++ Sbjct: 234 PENTYAQRSLLSLVSIYRDMKNEAEMMNAVARLKKGKEANTAYKLVAEYNLNKGDYSSSA 293 Query: 211 PRFQLVL 217 ++ ++ Sbjct: 294 EYYEKIV 300 >gi|260592517|ref|ZP_05857975.1| putative BatD protein [Prevotella veroralis F0319] gi|260535563|gb|EEX18180.1| putative BatD protein [Prevotella veroralis F0319] Length = 854 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 36/132 (27%), Gaps = 25/132 (18%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 M A+ I +A + + F IA+ L ++ ++ Sbjct: 586 MEAISDMEETIKKAKVQKSKNNNILSFLIIALLALPIHAFSQTKSDV----------DKL 635 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGE 118 Y ++ N+++A + + + + L Y A E Sbjct: 636 Y-------QKGNYAQAVKGYEKLLEQ------GESAALYYNLGDCYYRLDNIPHAVLAYE 682 Query: 119 EYITQYPESKNV 130 P ++ Sbjct: 683 RAQRLAPSDDDI 694 >gi|219849677|ref|YP_002464110.1| tetratricopeptide repeat-containing protein [Chloroflexus aggregans DSM 9485] gi|219543936|gb|ACL25674.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aggregans DSM 9485] Length = 1838 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 66/201 (32%), Gaps = 26/201 (12%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++ Y +A FL+ +A P A++ + A + Sbjct: 7 QDAYTQARTFLEANQIEQAIGLTQHILTYHPDNLEAQRI---LGEAYLAQRDLSAAIATF 63 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E+ + P +N+ + +GM+Y Q + + +E + P ++ Sbjct: 64 EQVLQADP--ENIP-AHVGLGMAYEW--------QGRLDKAIAEFEQALEIRPDMPELRA 112 Query: 178 ARFYV-------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 + +L+ + R Y + AI F+ + + + +A Sbjct: 113 QLVRLYTEAWGSEHAALRLSRSGL--ARLYARGYMLPQAINEFKHFITEHPE---RLDAW 167 Query: 231 ARLVEAYVALALMDEAREVVS 251 L+EA + +DEA E Sbjct: 168 VGLIEALWRHSQLDEAAETCR 188 >gi|240080649|ref|ZP_04725192.1| hypothetical protein NgonF_04952 [Neisseria gonorrhoeae FA19] gi|240123590|ref|ZP_04736546.1| hypothetical protein NgonP_06559 [Neisseria gonorrhoeae PID332] gi|268596773|ref|ZP_06130940.1| periplasmic protein [Neisseria gonorrhoeae FA19] gi|268682218|ref|ZP_06149080.1| periplasmic protein [Neisseria gonorrhoeae PID332] gi|268550561|gb|EEZ45580.1| periplasmic protein [Neisseria gonorrhoeae FA19] gi|268622502|gb|EEZ54902.1| periplasmic protein [Neisseria gonorrhoeae PID332] Length = 237 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S V + +Y +A+ + FS A +A++S+ + + G Sbjct: 111 SAHTVETAQNLYNQALKHYQNGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 169 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168 + +G Y ++ +S V + +G + +D+ +++ Sbjct: 170 CESVIEIGGRYANRFKDSPTAPEVIFKIGECQYRLQQKDIAR---------ATWRSLIQT 220 Query: 169 YTNSP 173 Y SP Sbjct: 221 YPGSP 225 >gi|194367003|ref|YP_002029613.1| TPR repeat-containing protein [Stenotrophomonas maltophilia R551-3] gi|194349807|gb|ACF52930.1| TPR repeat-containing protein [Stenotrophomonas maltophilia R551-3] Length = 612 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 19/65 (29%), Gaps = 8/65 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 V + +F+ A + F D A G Y +A + + + Sbjct: 372 ADGVQAYRNGDFASARKQFEGIDNDA--GWY------NLANALARQGNYDEAIAAYDRAL 423 Query: 122 TQYPE 126 +P Sbjct: 424 ALHPG 428 >gi|303235663|ref|ZP_07322270.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN] gi|302484110|gb|EFL47098.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN] Length = 858 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 4/69 (5%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E A + N+++A + + + + P A + QY A A E + Sbjct: 634 EDAAKAYDKGNYTEAAKIYQRLIEENPSAAL----YYNLGNAQYRANDITHAILSYERAL 689 Query: 122 TQYPESKNV 130 P ++ Sbjct: 690 KLRPSDEDA 698 >gi|254785745|ref|YP_003073174.1| tetratricopeptide repeat domain-containing protein [Teredinibacter turnerae T7901] gi|237684440|gb|ACR11704.1| tetratricopeptide repeat domain protein [Teredinibacter turnerae T7901] Length = 933 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 59/181 (32%), Gaps = 23/181 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A + + A FN+ S P + +A +L +A + +Q A E+ Sbjct: 590 IYRQAENARDTGDTALAQNLFNRVSDTIPGSELAPTALYDAASLALKDKSWQAAIFFLEK 649 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + YP K ++ + + + T + NS Sbjct: 650 LQSNYPRQKY--------AKETSRQLSVAYLNAKQTDKAASQFEALA----NSDDTNEV- 696 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEAYV 238 +T + + Y ++ AI ++ NY + EAM RL + Y Sbjct: 697 -KMTAL--------WQAAQLYDEKKNTAGAIRSYRDYAHNYREPYPQNIEAMYRLTQLYE 747 Query: 239 A 239 Sbjct: 748 E 748 Score = 42.4 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 30/63 (47%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 +Y+ A L LK++++ A + + ++P A+++ + +A + +AAS Sbjct: 623 APTALYDAASLALKDKSWQAAIFFLEKLQSNYPRQKYAKETSRQLSVAYLNAKQTDKAAS 682 Query: 116 LGE 118 E Sbjct: 683 QFE 685 >gi|150400673|ref|YP_001324439.1| TPR repeat-containing protein [Methanococcus aeolicus Nankai-3] gi|150013376|gb|ABR55827.1| Tetratricopeptide TPR_2 repeat protein [Methanococcus aeolicus Nankai-3] Length = 554 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 45/130 (34%), Gaps = 12/130 (9%) Query: 62 EKAVLFLKEQNFSKAYE-YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +L +++ A + Y+N +++ K+ A+ Y G Y+ + E Sbjct: 23 SDGNNYLDVKDYKNAADCYYNALNKN----PNDDKAWYSMAYALYKLGDYKASFDAINEA 78 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL-----MLQYMSRIVERYTNSPYV 175 + ++ Y +YL G Y + R + D+ + + + + Y + Sbjct: 79 LKLNQDNP-TKY-HYLKGSIYYALGRYIDEDESYNLEDNKSYLEEAFTNLNSYYEQNRQN 136 Query: 176 KGARFYVTVG 185 A + Sbjct: 137 TSALIKMGKI 146 >gi|16753067|ref|NP_444631.1| hypothetical protein CP0079 [Chlamydophila pneumoniae AR39] gi|8163361|gb|AAF73626.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39] Length = 318 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 53/150 (35%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A +++ FP + ++L A + +A ++ Q+P Sbjct: 151 EDALRIYDEILTAFPSKDLGAQALYSKAALLIVKNDLTEATKTLKKLTLQFPLHILSSEA 210 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + + Y Q + P++ + + +++ N P + V R A Sbjct: 211 FVRLSEIYLQQAKKEPHNLQYLHFAKLNEEAMKKQHPNHPMNEVVSANVGAMREHYARGL 270 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 GR+Y K+ + AA ++ + NY D Sbjct: 271 YATGRFYEKKKKAEAANIYYRTAITNYPDT 300 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 34/228 (14%), Positives = 72/228 (31%), Gaps = 45/228 (19%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 E + + FLK+ NF KA F + FP + ++ + ++ A Sbjct: 42 SAEEYFSQGQEFLKKGNFRKALLCFGIITHHFPRDILRNQAQYLIGVCYFTQDHPDLADK 101 Query: 116 LGEEYITQYPESKNVDY------VYYLVGMSYAQ-------MIRDVPYDQRATKLMLQYM 162 Y+ + +Y + Y + +AQ + P A + L+ Sbjct: 102 AFASYLQL----PDAEYSEELFQMKYAIAQRFAQGKRKRICRLEGFPKLMNADEDALRIY 157 Query: 163 SRIVERYTNSPYVKGA---RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 I+ + + A + + + +N L A + + Sbjct: 158 DEILTAFPSKDLGAQALYSKAALLIVKNDLTE-----------------ATKTLKKLTLQ 200 Query: 220 YSDAEHAEEAMARLVEAYVA--------LALMDEAREVVSLIQERYPQ 259 + + EA RL E Y+ L + A+ +++++P Sbjct: 201 FPLHILSSEAFVRLSEIYLQQAKKEPHNLQYLHFAKLNEEAMKKQHPN 248 >gi|134117023|ref|XP_772738.1| hypothetical protein CNBK1120 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255356|gb|EAL18091.1| hypothetical protein CNBK1120 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1101 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 22/139 (15%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108 TD + Y ++ Q ++KAYE + Q P + Y Sbjct: 369 TDPSDAQSWYLLGRAYMAAQRYNKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIA 422 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y+ A I P + V+Y +G S + + D + SR +E Sbjct: 423 QYRDALDAYSRAIRLNP---YISEVWYNLG-SLYESCNNQMAD------AMDAYSRALEL 472 Query: 169 YTNSPYVKGARFYVTVGRN 187 N+ + + + +N Sbjct: 473 DPNN---TVIKQRMALLQN 488 >gi|322435642|ref|YP_004217854.1| Lytic transglycosylase catalytic [Acidobacterium sp. MP5ACTX9] gi|321163369|gb|ADW69074.1| Lytic transglycosylase catalytic [Acidobacterium sp. MP5ACTX9] Length = 781 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 47/135 (34%), Gaps = 7/135 (5%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + +Y ++L + ++A ++ + FP + A + A++ Y +Y Sbjct: 390 PNSRWTEEALYSGGNMYLLTHDSTQALYHYGLLVQHFPNSTYAPSAHWRMAWMNYRLRRY 449 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +AA L +E + +Y Y G Y +D Y + Y Sbjct: 450 PEAARLMDEQVVRYAAGTEASSALYWRGRIYEDEEKDFG-------QAANYYRALSANYN 502 Query: 171 NSPYVKGARFYVTVG 185 N Y AR + V Sbjct: 503 NFYYGVLARQRLAVI 517 Score = 38.9 bits (90), Expect = 0.70, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 34/137 (24%), Gaps = 23/137 (16%) Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 YP S+ + Y G Y L + +V+ + NS Y A + + Sbjct: 389 YPNSRWTEEALYSGGNMYLLTHDST--------QALYHYGLLVQHFPNSTYAPSAHWRMA 440 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VALAL 242 + Y A + Y+ A A+ Y Sbjct: 441 WMN--------------YRLRRYPEAARLMDEQVVRYAAGTEASSALYWRGRIYEDEEKD 486 Query: 243 MDEAREVVSLIQERYPQ 259 +A + Y Sbjct: 487 FGQAANYYRALSANYNN 503 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 9/54 (16%), Positives = 20/54 (37%) Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 ++ Y ++ EEA+ Y+ +A L+ + +P +A Sbjct: 384 QMVDKYPNSRWTEEALYSGGNMYLLTHDSTQALYHYGLLVQHFPNSTYAPSAHW 437 >gi|226505390|ref|NP_001150042.1| serine/threonine-protein phosphatase 5 [Zea mays] gi|195636270|gb|ACG37603.1| serine/threonine-protein phosphatase 5 [Zea mays] Length = 483 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 43/140 (30%), Gaps = 29/140 (20%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARKSLLMSAFVQYSA 107 +DV+ E KA K FS+A E + + + A ++ F Sbjct: 7 SDVQRAEEFKLKANDAFKANKFSQAIELYSQAIELNSSNAVY--WANRA-----FAHTKL 59 Query: 108 GKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +Y A + I + Y YY G +Y M K L+ ++ Sbjct: 60 EEYGSAVQDATKAIEI-----DSRYSKGYYRRGAAYLAM--------GKFKEALKDFQQV 106 Query: 166 VERYTNSPYVKGARFYVTVG 185 + N P A + Sbjct: 107 KKICPNDP---DATRKLKEC 123 >gi|118588323|ref|ZP_01545732.1| hypothetical protein SIAM614_23617 [Stappia aggregata IAM 12614] gi|118439029|gb|EAV45661.1| hypothetical protein SIAM614_23617 [Stappia aggregata IAM 12614] Length = 315 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 17/133 (12%), Positives = 40/133 (30%), Gaps = 14/133 (10%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 ++ D + +V Y +A F +++ A F +P A + Sbjct: 175 ATDDDQIANVIGSGDPSSDYNQAYSFAVNGDYAAAERGFRNFLETYPDDAQAANAQYWLG 234 Query: 102 FVQYSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 + Y++A + ++ +P + +G+S Sbjct: 235 ESLLAQQNYREA---ADAFLKTYTDHPGNAKSPDSLLKLGVSL--------RGLGEADAA 283 Query: 159 LQYMSRIVERYTN 171 S ++ +Y N Sbjct: 284 CATFSELLSKYPN 296 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 36/136 (26%), Gaps = 28/136 (20%) Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 P + A+ G Y A ++ YP+ Y +G S Sbjct: 190 PSSDY------NQAYSFAVNGDYAAAERGFRNFLETYPDDAQAANAQYWLGESLLA---- 239 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 Q+ + + + + + + V L + Sbjct: 240 ----QQNYREAADAFLKTYTDHPGNAKSPDSLLKLGVSLRGLGEAD-------------- 281 Query: 208 AAIPRFQLVLANYSDA 223 AA F +L+ Y +A Sbjct: 282 AACATFSELLSKYPNA 297 >gi|120609659|ref|YP_969337.1| hypothetical protein Aave_0965 [Acidovorax citrulli AAC00-1] gi|120588123|gb|ABM31563.1| TPR repeat-containing protein [Acidovorax citrulli AAC00-1] Length = 1084 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 50/166 (30%), Gaps = 16/166 (9%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 FAL +F + F G + + D + + +A + F A F Sbjct: 935 FALGLFAAAYDSFNTGMAQAG--EGVSGKDMDRIREAMLLRRAESAIGANRFDDALRDFA 992 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + P + ++ L + Q G Q A + + + + N YY M+Y Sbjct: 993 TLQKMNPQS---QRVALGTGMAQVGKGDVQAAIATFNQILA---RTPNAAVAYYGRAMAY 1046 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 L+ + R + +P R + R Sbjct: 1047 --------RAAGKLDDSLKDLDRAIALDPRNPQYPQVRAQIAAARK 1084 >gi|77920692|ref|YP_358507.1| TPR repeat-containing protein [Pelobacter carbinolicus DSM 2380] gi|77546775|gb|ABA90337.1| TPR repeat protein [Pelobacter carbinolicus DSM 2380] Length = 313 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 34/248 (13%), Positives = 67/248 (27%), Gaps = 64/248 (25%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQC--SRDFPF-------------AGVA------RKSL-- 97 Y + + + +A + F PF +A +++L Sbjct: 66 YYIGLALYDQGDLPRAIKAFRAALAESREPFRILFKLGLAQYGLGDLAASVASFKQALQV 125 Query: 98 --------LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 +QA + ++ I P+ +++GM Y+Q Sbjct: 126 NPASAETCYRLGLSYLRQSDLEQARAALDDAIRLNPKYTR---ALFILGMIYSQ------ 176 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYV----KGARFYVTVGRNQLAAKE--------VEIG 197 Q ++ ++ + + A A E Sbjct: 177 --QGNPTEAIRLFRQVEQASPDYTEACFELGMALLRNGELDEAAAQFEKTTVNSPRFTPA 234 Query: 198 RYYL-----KRGEYVAAIPRFQLVLANYS-DAEHAEEAMARLVEAYVALALMDEAREVVS 251 + L + G+ AI ++ L D E L E L D ARE + Sbjct: 235 HFMLGEARRRAGKLSEAISAYRQALEQNPRDT----EGWLHLAECQARLGQTDAAREALD 290 Query: 252 LIQERYPQ 259 + +P+ Sbjct: 291 KVLSLHPE 298 >gi|220906436|ref|YP_002481747.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 7425] gi|219863047|gb|ACL43386.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425] Length = 219 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 47/168 (27%), Gaps = 21/168 (12%) Query: 10 CIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDV-RYQREVYEKAVLFL 68 C+ + +T + + ++ + D R + + L Sbjct: 16 CLLPMLGTAIALATVTAISPVQAALSPAVSSPETPNLPATNPPDSLRNANDYFNTGNDHL 75 Query: 69 KEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 ++ N++ A + Q + P + + + G Y A + ++ I P Sbjct: 76 QQGNYAAAVTDYTQALQRNPNFVEAYTNRGTVRTI-----QGDYPGAIADFDQAIRIDPN 130 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPY-DQRATKLMLQYMSRIVERYTNSP 173 + + Y R Q + ++ + + P Sbjct: 131 N-STAYA-----------NRGTTRTIQGNFPEAIADFTQAIRLNPSDP 166 >gi|77165454|ref|YP_343979.1| TPR repeat-containing protein [Nitrosococcus oceani ATCC 19707] gi|76883768|gb|ABA58449.1| TPR repeat protein [Nitrosococcus oceani ATCC 19707] Length = 934 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 76/201 (37%), Gaps = 39/201 (19%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + ++ L +++ A F + + P + + ++ A Q AG ++ Sbjct: 712 EHPEVLAQEGWLAMRQNRPQDAIIAFREALKRSPTS----QIIVNLAHAQLQAGNQNESL 767 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + E+++ ++P +++ V Y + Y + ++ + + +V+R ++ Sbjct: 768 ATLEDWLKKHP--EDMV-VQYNLANLYLALKQE--------QKAASAFTTVVKRAPDN-- 814 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 V N LA + L++ + A+ + L +A + + L Sbjct: 815 --------VVALNNLA--------WLLRKNDPAKALEYAERALELAPNAPPVMDTLGML- 857 Query: 235 EAYVALALMDEAREVVSLIQE 255 L EA+ + L+++ Sbjct: 858 -----LLEKGEAKRSLRLLRK 873 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 3/71 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + +L ++Q ++ A F + P ++ + Y G+ QA L ++ Sbjct: 276 YAQGLLHFQQQQYADALTSFQKTLSKNP--EYMP-AVFYAGIAYYQQGQLTQAGQLLNQF 332 Query: 121 ITQYPESKNVD 131 + ++P S Sbjct: 333 LKRFPHSDTAA 343 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 17/135 (12%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + + ++ ++A + NQ + FP + A K+L M + G Y A ++ E I Sbjct: 312 AGIAYYQQGQLTQAGQLLNQFLKRFPHSDTAAKTLAMI---RLREGNYTSAQAILEPIIA 368 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 Q P ++ Q + Y ++ + S A + Sbjct: 369 QNPNDTAA-----------LDLLGSAILGQGKPEKSAAYFQKVTAQTPES---AAAYMKL 414 Query: 183 TVGRNQLAAKEVEIG 197 +G E IG Sbjct: 415 GLGFMMSGEHEQGIG 429 >gi|45656035|ref|YP_000121.1| hypothetical protein LIC10125 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45599268|gb|AAS68758.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 1197 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 54/146 (36%), Gaps = 10/146 (6%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVAR 94 G ++ S + + D + Y ++ + +++A F + + P F+ Sbjct: 757 SGNKKLSKEEFEAATQQDAANELAPYNIGIILFNDNLYNEAIGIFKEIIQKNPEFSD--- 813 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 + +++ Y G +QA + + N+ + + +S R+ + Sbjct: 814 -AHYQISYIYYKRGDLEQAEKEIRKALDLERNEGNL-FAL-IRILS---EQRNKMANPAI 867 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARF 180 K +L + E++ +SP+ A Sbjct: 868 KKEVLDLGRELAEKFPSSPHAAQAER 893 >gi|332705272|ref|ZP_08425353.1| TPR repeat-containing protein [Lyngbya majuscula 3L] gi|332356015|gb|EGJ35474.1| TPR repeat-containing protein [Lyngbya majuscula 3L] Length = 346 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 71/204 (34%), Gaps = 32/204 (15%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E Y + V L N+ +A F Q + P+ +V + G YQ+A Sbjct: 129 EFYNRGVDQLDNGNYPEAMANFKQALQLEPYDP---DINYNLGYVHHIQGNYQEAIDNYT 185 Query: 119 EYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP--Y 174 I DY Y G +Y + + + S+ + ++ Y Sbjct: 186 AAIKI-----KTDYGEAYSNRGYAYFVQKKFI--------EAIADFSKAIALTPDNDTVY 232 Query: 175 VKGARFY--VTVGRNQLAAKE--VEI----GRYYLKRGEYVAAIPRFQLVLANYSDA--- 223 + Y V +A + + I Y +RG + + ++Q +A+Y++ Sbjct: 233 LSRGNAYSEVDNYFQAIADYDRALSINPKNAMAYYQRGLTRSKLKQYQAAVADYTETLKI 292 Query: 224 -EHAEEAMARLVEAYVALALMDEA 246 +A + A + L ++EA Sbjct: 293 EPTFADAFYKRGLARLDLNKVEEA 316 >gi|326335004|ref|ZP_08201204.1| TPR repeat-containing protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692809|gb|EGD34748.1| TPR repeat-containing protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 250 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 26/81 (32%), Gaps = 7/81 (8%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E++ +A +++ A + + + + A Y G + Sbjct: 22 EELFAQAGSAYNREDWQTAIDNYQKILSQ---GQASEALYYNLANAHYKKGDIAPSIYYY 78 Query: 118 EEYITQYPESK----NVDYVY 134 E+ + P++ N+ Y Sbjct: 79 EKALQLAPDNPQVQANLKYAQ 99 >gi|58260608|ref|XP_567714.1| general transcriptional repressor [Cryptococcus neoformans var. neoformans JEC21] gi|57229795|gb|AAW46197.1| general transcriptional repressor, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1101 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 22/139 (15%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108 TD + Y ++ Q ++KAYE + Q P + Y Sbjct: 369 TDPSDAQSWYLLGRAYMAAQRYNKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIA 422 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y+ A I P + V+Y +G S + + D + SR +E Sbjct: 423 QYRDALDAYSRAIRLNP---YISEVWYNLG-SLYESCNNQMAD------AMDAYSRALEL 472 Query: 169 YTNSPYVKGARFYVTVGRN 187 N+ + + + +N Sbjct: 473 DPNN---TVIKQRMALLQN 488 >gi|73670517|ref|YP_306532.1| hypothetical protein Mbar_A3062 [Methanosarcina barkeri str. Fusaro] gi|72397679|gb|AAZ71952.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 391 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 70/253 (27%), Gaps = 52/253 (20%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVARKSLLMS 100 + ++++ +YE+ V+ ++ A E F+ R FP +L Sbjct: 122 EGEDPEKSNLKSTESLYEEGVILYRQGRLRLALEAFDMVLLENPRHFP-------ALFHR 174 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM---SYAQMIRDVPYDQRATKL 157 +Y++A E P G+ S +++ + Sbjct: 175 GNTLLKLKRYEEALETFESASRINPNHP---------GLWTNSGFALVK-----LEHLRQ 220 Query: 158 MLQYMSRIVERYTNSPYVKGARF----YVTVGRNQLAAKE-------------VEIGRYY 200 L+ + + + V +L E E G+ Y Sbjct: 221 ALEAFEKSISLNPVQKNAWEGKEAVLVRVRKCEEKLKEFEKSLKRNPEDADIWFEKGKLY 280 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL---IQERY 257 LK GE + F+ L EA + EA + + + Sbjct: 281 LKLGELEKSREAFEKALEE---KSENAEAWHLRGKILFETGSEKEALHAFEMALRKKPNF 337 Query: 258 PQGYWARYVETLV 270 P+ W L+ Sbjct: 338 PEA-WYEKGRVLL 349 >gi|29653887|ref|NP_819579.1| TPR domain-containing protein [Coxiella burnetii RSA 493] gi|161831595|ref|YP_001596478.1| TPR repeat-containing methyltransferase [Coxiella burnetii RSA 331] gi|29541150|gb|AAO90093.1| tetratricopeptide repeat family protein [Coxiella burnetii RSA 493] gi|161763462|gb|ABX79104.1| tetratricopeptide repeat protein/methyltransferase [Coxiella burnetii RSA 331] Length = 561 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 49/182 (26%), Gaps = 49/182 (26%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A +++ +FSKA Y+ + P + ++Q+A + Sbjct: 179 AHVYMYLGDFSKAITYYEKRLALEPENA---DAQYDCGLAHLKDNQFQKAIDYFTNALLL 235 Query: 124 YPESKNVDY----VYYLVG------MSYAQMIRDVPYD------------QRATKLMLQY 161 PE + Y Y G + Y + + P Q + + Y Sbjct: 236 NPEHPDCHYSLATAYLQRGDHKEALLHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDY 295 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + + N + I YLK I + + + +Y Sbjct: 296 FKQALTLDPNYREA-----------------HLNIAAVYLK-------INQIKQAIEHYE 331 Query: 222 DA 223 Sbjct: 332 ST 333 >gi|254505611|ref|ZP_05117757.1| TPR repeat-containing protein [Vibrio parahaemolyticus 16] gi|219551264|gb|EED28243.1| TPR repeat-containing protein [Vibrio parahaemolyticus 16] Length = 603 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 43/127 (33%), Gaps = 24/127 (18%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 L F +FF++A+ L S D ++A+ + + + +A + Sbjct: 306 LLMFRRGVFFAVALAVL-PLAHSPSAQASPWLTKD--------QQAMQHFENKQYQQAAD 356 Query: 79 YFNQCS----RDFPFAGV-----------ARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 F + + + +++ A G YQ A L E + Q Sbjct: 357 LFEDPNWKGIAQYESGDYQGAAETLAPLSSPQAMYNRANALAQLGNYQDAIDLYESVLKQ 416 Query: 124 YPESKNV 130 P++++ Sbjct: 417 EPDNQDA 423 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 7/46 (15%), Positives = 19/46 (41%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94 +++ + + +Y +A + N+ A + + + P AR Sbjct: 379 ETLAPLSSPQAMYNRANALAQLGNYQDAIDLYESVLKQEPDNQDAR 424 >gi|254292267|ref|ZP_04963021.1| FOG: TPR repeat [Vibrio cholerae AM-19226] gi|150421817|gb|EDN13810.1| FOG: TPR repeat [Vibrio cholerae AM-19226] Length = 461 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 14/133 (10%) Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63 +L A+C+F F+L + F +++ W S + D + E Y + Sbjct: 128 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 180 Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117 A ++ + A Y+ + ++ + A AG+ Q+A L Sbjct: 181 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 239 Query: 118 EEYITQYPESKNV 130 E+ + Q P ++ Sbjct: 240 EQVLKQEPNHQDA 252 >gi|94969718|ref|YP_591766.1| lytic transglycosylase, catalytic [Candidatus Koribacter versatilis Ellin345] gi|94551768|gb|ABF41692.1| Lytic transglycosylase, catalytic [Candidatus Koribacter versatilis Ellin345] Length = 798 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 19/156 (12%), Positives = 55/156 (35%), Gaps = 11/156 (7%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ---REVYEKAVLFLKEQNFSKAYEYFNQ 82 + ++AV + + ++ + +++Y + ++ + + Y +Q Sbjct: 322 VLANLAVSLMKSGATRDAQKYLDQIPATAAAEINGQKLYNEMMIARHNNDSDRVASYLSQ 381 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 + + +++L + + Y + E ++PE Y ++ S+ Sbjct: 382 LRQQASTSSFFQEALFEAGNMYMLQHDYDHSIDCYREIHERFPEGPRAAYAHWRA--SWF 439 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + Q T L+ +E+Y ++ V A Sbjct: 440 DLR------QGRTDAALREFREQLEKYPSTTEVTAA 469 >gi|221488858|gb|EEE27072.1| TPR domain-containing protein, putative [Toxoplasma gondii GT1] Length = 823 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 60/195 (30%), Gaps = 51/195 (26%) Query: 37 GWERQSSRDVYL---DSVTDVRYQREVYEKAVLFLKEQNFSKAY----EYFNQCSRDFPF 89 G S++ + + + ++ +E+N+ A + Q FP Sbjct: 111 GCSHDHSKERQIYEKPTGEKIDAAERFRQEGNAAFREKNYGLAAVNYRKALLQFDYTFPD 170 Query: 90 AGVARKSL--------LMSAFVQYSAGKYQQAASLGEEYIT------QYPESKNVDYVYY 135 +K + L A + Y++ YI P++ YY Sbjct: 171 TDEEQKRMDSVKLPCHLNLAACKLQQQDYEEV------YIQCRLALEMDPKNTK---AYY 221 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 G+++ Q V + + + + +S ++ A + + R ++ Sbjct: 222 RRGLAHLQQDNFV--------KAKEDLMEALTQEPSSKEIRDA---LQLLREKIHR---- 266 Query: 196 IGRYYLKRGE--YVA 208 Y +R Y A Sbjct: 267 ----YHRRSAMTYKA 277 >gi|307152921|ref|YP_003888305.1| peptidase M48 Ste24p [Cyanothece sp. PCC 7822] gi|306983149|gb|ADN15030.1| peptidase M48 Ste24p [Cyanothece sp. PCC 7822] Length = 662 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAASLG 117 + + + L+EQ +S+A E + A + + YS G+ +A +L Sbjct: 2 LLQDGLTALREQRYSQAVELLEEFCTQAANANDPTLSQGQMALIKAYYSNGQTDKAIALA 61 Query: 118 EEYITQYPESKNVDYVY-YLVGMS 140 EE +T + +S+ + +L G++ Sbjct: 62 EE-LTHHLDSQVSQWAQEFLKGLT 84 >gi|149375215|ref|ZP_01892987.1| hypothetical protein MDG893_06339 [Marinobacter algicola DG893] gi|149360579|gb|EDM49031.1| hypothetical protein MDG893_06339 [Marinobacter algicola DG893] Length = 934 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 31/95 (32%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 L+ + VY + E + A +F + FP + + Sbjct: 565 LALIAEGPPGDVPAKDTDSLQRQLASSVYYQGEKAASEGHIDTAVAHFQRVESAFPGSDI 624 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 A K +A A ++Q A + + T YP+ Sbjct: 625 AIKGRYDAANTLLKAERWQAAVNELTRFRTDYPQH 659 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 67/219 (30%), Gaps = 29/219 (13%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y+ A ++ + Q +P + + ++ A +SA Y +A S Sbjct: 130 LYQMAKAHAYTGQAEESIDRLRQLVGLYPSSSLVPEARFRIAEAAFSAQDYAEAESEYSR 189 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI------VERYTNSP 173 I+ Y+ G S + RA K L + R S Sbjct: 190 VISGDGTDSLKTKARYMQGWSQYKQGASART--RAAKTFLAVLDGFGEDTRGFRRIPASD 247 Query: 174 -YVKGARFYVTVG-------RNQLAAKEVEIG--RY----YLKRGEYVAAIPRFQL---- 215 + F + LA + G + Y + +Y A+ RF+ Sbjct: 248 AELVDDTFRIVALMAAEDRGVESLAGWLTDAGGKDFGYLLYDRLADYYASNRRFEDSVAV 307 Query: 216 ---VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 + ++ +A+ V+ + +D AR + Sbjct: 308 NHAFVRDFQAHNAVPAFLAQNVDVWRMAGQIDRARAARA 346 >gi|114800143|ref|YP_758890.1| hypothetical protein HNE_0156 [Hyphomonas neptunium ATCC 15444] gi|114740317|gb|ABI78442.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444] Length = 318 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 41/104 (39%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + V+++ N P A F++ G ++ Y + + ++ Sbjct: 211 AQEAFQSFVDQFGNDPQAGEAYFWL--------------GETLHQQNAYAESGQAYTTMI 256 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 ++ D E A +A+ARL + + +A + + + +RYP Sbjct: 257 RSFPDDERAPDALARLARSMRLIGDTAKACQALDTLPKRYPNAS 300 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 37/112 (33%), Gaps = 8/112 (7%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ A L +++ A E F F A ++ + Y ++ Sbjct: 195 LFAVARQRLLALDYAGAQEAFQSFVDQFGNDPQAGEAYFWLGETLHQQNAYAESGQAYTT 254 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 I +P+ + + S ++I D T Q + + +RY N Sbjct: 255 MIRSFPDDERAPDALARLARS-MRLIGD-------TAKACQALDTLPKRYPN 298 Score = 39.3 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 28/91 (30%), Gaps = 16/91 (17%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 AR+ LL Y A + ++ Q+ Y+ +G + Q Q Sbjct: 199 ARQRLLAL--------DYAGAQEAFQSFVDQFGNDPQAGEAYFWLGETLHQ--------Q 242 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 A Q + ++ + + A + Sbjct: 243 NAYAESGQAYTTMIRSFPDDERAPDALARLA 273 >gi|24212838|ref|NP_710319.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai str. 56601] gi|24193495|gb|AAN47337.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai str. 56601] Length = 1197 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 54/146 (36%), Gaps = 10/146 (6%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVAR 94 G ++ S + + D + Y ++ + +++A F + + P F+ Sbjct: 757 SGNKKLSKEEFEAATQQDAANELAPYNIGIILFNDNLYNEAIGIFKEIIQKNPEFSD--- 813 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 + +++ Y G +QA + + N+ + + +S R+ + Sbjct: 814 -AHYQISYIYYKRGDLEQAEKEIRKALDLERNEGNL-FAL-IRILS---EQRNKMANPAI 867 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARF 180 K +L + E++ +SP+ A Sbjct: 868 KKEVLDLGRELAEKFPSSPHAAQAER 893 >gi|79614|pir||PQ0180 CytB protein - Synechococcus sp. (strain PCC 7942) (fragment) gi|256653|gb|AAB23486.1| 3' of cytA [Synechococcus] Length = 188 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 43/126 (34%), Gaps = 17/126 (13%) Query: 50 SVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 ++ + +Y + + L + + +A + + P L Y G Sbjct: 50 AIAHGKATAALYGNRCWVRLSLERYEEAIKDCSVALDLQPHEPET---WLNRGLAYYRQG 106 Query: 109 KYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 + Q A + ++ + Q P DY YY G++Y D + + + +E Sbjct: 107 QSQAAIADFDQLLQQSPT----DYRAYYNRGLAY--------LDLAQPEQAIADFQQALE 154 Query: 168 RYTNSP 173 R + Sbjct: 155 RLPATE 160 >gi|226471570|emb|CAX70866.1| hypothetical protein [Schistosoma japonicum] Length = 431 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 50/151 (33%), Gaps = 26/151 (17%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF----AGVARK--------SLL 98 + Y + EKA FLK+ F A E + + + + +K L Sbjct: 253 PERIAYANTLKEKANNFLKDSKFDSAIELYKRLDDELQYVVANGPTEQKELSGVTVAVQL 312 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A V K + + + + +++ + +G ++ + + Sbjct: 313 NLALVYLKLCKPDKCIEFCKRVLDNFSDNEK---ALFRIGQAHLLR--------KDHEEA 361 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + Y RIV + N+ A V + ++ Sbjct: 362 VVYFKRIVTKNPNN---ASAVKQVQICEEEI 389 >gi|261343490|ref|ZP_05971135.1| putative periplasmic protein [Providencia rustigianii DSM 4541] gi|282568636|gb|EFB74171.1| putative periplasmic protein [Providencia rustigianii DSM 4541] Length = 262 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 50/140 (35%), Gaps = 12/140 (8%) Query: 50 SVTDVRYQREVYEKA-VLFLKEQ---NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 + + +++ Y A L + + +A + +P +G + + Y Sbjct: 131 APSSGGNEKDDYNAAVQLAMNSKSKAQIDEAIGALQGFIKTYPKSGYQSNANYWLGQLNY 190 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + G AA + QYP+S+ Y VG+ + D+ ++ Sbjct: 191 NKGSKDDAAFYFATVVKQYPKSQKSSEALYKVGL--------IMQDKGQKDKAKAVYQQV 242 Query: 166 VERYTNSPYVKGARFYVTVG 185 +++Y NS K A ++ Sbjct: 243 LKQYPNSAGSKLAEKKLSAL 262 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 39/112 (34%), Gaps = 14/112 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + ++ Y S Y A +++ +G A F V Sbjct: 160 EAIGALQGFIKTYPKSGYQSNANYWLGQLN--------------YNKGSKDDAAFYFATV 205 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + Y ++ + EA+ ++ D+A+ V + ++YP ++ E Sbjct: 206 VKQYPKSQKSSEALYKVGLIMQDKGQKDKAKAVYQQVLKQYPNSAGSKLAEK 257 >gi|158341619|ref|YP_001522783.1| TPR domain-containing protein [Acaryochloris marina MBIC11017] gi|158311860|gb|ABW33469.1| TPR domain protein [Acaryochloris marina MBIC11017] Length = 153 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 37/105 (35%), Gaps = 3/105 (2%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 ++AVC + + + + +++ +A+ ++ ++ A F+Q Sbjct: 5 AVLTLAVCDAPSSVASTQSIEITEQIQSNISEYDLFNRALRKYEQGDYKGAIADFDQAIA 64 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 P + + + F +Y +A + + I PE Sbjct: 65 LNPQNVM---AYIHRGFTYDDMKEYSKAIADFDRAIALNPELPAA 106 >gi|34762911|ref|ZP_00143893.1| TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887438|gb|EAA24526.1| TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 936 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 68/188 (36%), Gaps = 14/188 (7%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 +Q+ + A FL ++N A + + + + + S++ V Y+ Y + Sbjct: 123 KKTFQKTFFAVAQNFLAKENNEAAQKAYKEIIDN-KYENYKE-SMMGLGIVYYNLKDYDK 180 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A E+ + P+ +N + V YL + + T + + ++ Sbjct: 181 AIYWLSEFSKEMPK-ENKEMVSYLRASALYRK--------GNTDEAISRFEELANIEPST 231 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN-YSDAEHAEEAMA 231 Y + A Y+ + K+ +YL R + ++ + Y E+ ++A+ Sbjct: 232 EYSRKAALYLIEIYSN--RKDEAKVTFYLNRIKGTKEYNTAMTMIGDLYVTKENYDKALD 289 Query: 232 RLVEAYVA 239 ++ Sbjct: 290 YYNQSNDK 297 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 68/206 (33%), Gaps = 33/206 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K + + + +A F + + ++ K L + A +Y +A GE+Y Sbjct: 508 YLKGIAAMGLGKYDEAESEFQKVLASGDQS-LSTKVYLNRVRNYFLAERYNEAVQAGEQY 566 Query: 121 ITQYPESKNVDYVYY-----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 +++ S + D V Y +G+SY ++ + YDQ S Y Sbjct: 567 LSK--LSPDKDKVIYSEMLDKIGLSYFRLGK---YDQAR-----------------SYYS 604 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 K A + +I Y Y A ++ V + + + E+A + + Sbjct: 605 KIASMKGYEVYGK-----FQIADSYYNEKNYEKAGSLYKEVYNQFGETFYGEQAYYKYIM 659 Query: 236 AYVALALMDEAREVVSLIQERYPQGY 261 D + YP Sbjct: 660 TLSLTGNTDAFEREKDNFMKVYPNSN 685 >gi|317013062|gb|ADU83670.1| paralysed flagella protein [Helicobacter pylori Lithuania75] Length = 801 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 186 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTMFKKDLYLLEIIALGQLG 245 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP N+ Y V + + K ++Y RI+ Sbjct: 246 IKKSLLIDIGTKWIKNYPTDPNIPEALYYVAKALDEN--------NNYKQAMRYYKRILL 297 Query: 168 RYTNSPYVKGARFYVTV 184 Y NS Y A+ + + Sbjct: 298 EYKNSRYAPLAQMRLAI 314 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 215 RTISRAFKNYPQTMFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPNIPEALYY 274 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 275 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 313 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 16/47 (34%) Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + NY + EA+ + +A +A I Y +A Sbjct: 259 IKNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYKNSRYA 305 >gi|260440449|ref|ZP_05794265.1| hypothetical protein NgonDG_05071 [Neisseria gonorrhoeae DGI2] gi|291043748|ref|ZP_06569464.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291012211|gb|EFE04200.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] Length = 237 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S V + +Y +A+ + FS A +A++S+ + + G Sbjct: 111 SAHTVETAQNLYNQALKHYQNGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 169 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168 + +G Y ++ +S V + +G + +D+ +++ Sbjct: 170 CESVIEIGGRYANRFKDSPTAPEVIFKIGKCQYRLQQKDIAR---------ATWRSLIQT 220 Query: 169 YTNSP 173 Y SP Sbjct: 221 YPGSP 225 >gi|218781266|ref|YP_002432584.1| hypothetical protein Dalk_3428 [Desulfatibacillum alkenivorans AK-01] gi|218762650|gb|ACL05116.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum alkenivorans AK-01] Length = 271 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 34/261 (13%), Positives = 80/261 (30%), Gaps = 41/261 (15%) Query: 8 AICIFEAWAYQLYKFALTIFFSIAVCFL-VGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66 A+ + L K A + +C ++D + + +++A+ Sbjct: 17 ALLVMPDILVTLKKTAARCLLAAVICVWTASCASGPAKDGPIPGAS-------YFDRAIF 69 Query: 67 FLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 + A E + + + A +L + + G+Y +A ++ + P Sbjct: 70 SESKGRHLAAIEQYTRYLEMNQNSPEYAAPALNNRGTLYWVLGRYDEALQDFDKAVDMQP 129 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS--PY-----VKGA 178 +S ++Y +V D + ++ ++ + N+ Y + Sbjct: 130 DS----------ALNYINR-GNVYADMGDVERAIEDYNQAITLDPNNGLAYSNRGLAWSS 178 Query: 179 RFYVTVGR----NQLA-AKE------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 +A E ++ G +Y A+ F V+ + Sbjct: 179 LKRFDQAIPDLDKAIAFGHEGVYKSLMKRGVIRYGTKDYNGAVEDFSRVIKMHPGFT--- 235 Query: 228 EAMARLVEAYVALALMDEARE 248 EA AY L ++A+ Sbjct: 236 EAYYFRGLAYQQLNEAEKAQT 256 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 36/107 (33%), Gaps = 6/107 (5%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + + + F +A ++ KSL+ ++Y Y A I Sbjct: 171 NRGLAWSSLKRFDQAIPDLDKAIAFGHEGVY--KSLMKRGVIRYGTKDYNGAVEDFSRVI 228 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +P YY G++Y Q + + Q + + + ++ Sbjct: 229 KMHPGFTE---AYYFRGLAY-QQLNEAEKAQTDLQTAMDLQKALEKQ 271 >gi|170717698|ref|YP_001784771.1| hypothetical protein HSM_1451 [Haemophilus somnus 2336] gi|168825827|gb|ACA31198.1| Tetratricopeptide TPR_2 repeat protein [Haemophilus somnus 2336] Length = 398 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 70/200 (35%), Gaps = 30/200 (15%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LDS + +++++ K A FL + +A + + A +L A + Sbjct: 103 LDSSPNYTFEQKLLAKQQLAKDFLTIGFYDRAENLYILLIDE---PNYAENALQQLAVIY 159 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++++A ++ E+ P N+ +Y Y + + D++ + + + Sbjct: 160 QKTKEWKKAINVAEKLAKISPTEDNIALAHY-----YCEYSLTLGSDEQQQAQAIHILKQ 214 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + S + I Y+ EY A+ + VL +A+ Sbjct: 215 ALNVSKTSVRAS-----------------ILIAERYIVNLEYQRAVQHLENVL--IQNAD 255 Query: 225 HAEEAMARLVEAYVALALMD 244 + E + L Y L +D Sbjct: 256 YMSEILPALKYCYQELNRLD 275 >gi|83645407|ref|YP_433842.1| hypothetical protein HCH_02627 [Hahella chejuensis KCTC 2396] gi|83633450|gb|ABC29417.1| uncharacterized protein conserved in bacteria [Hahella chejuensis KCTC 2396] Length = 933 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 66/229 (28%), Gaps = 41/229 (17%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D R +Y+ A KA + +P +G A ++ ++YSAG+ Sbjct: 122 QPGDKGNDRVLYQLARANGMLGQTDKALISLERLVGQYPRSGYATEAWFRIGELRYSAGE 181 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV--- 166 Y +A S + Y++G + + Q LQ +++ Sbjct: 182 YVKAQSAYSRVLADRSAGDLSSKARYMLGWTQFK--------QENFSASLQTFLQVLSHL 233 Query: 167 --------ERYTNSPYVKGARFYVTVG-------------------RNQLAAKEVEIG-- 197 E + LA K + Sbjct: 234 ESNANPTGEEEPGVREAGDDALRIISIMASYGKGPETLKAAIALGDYRSLAPK-LYAALY 292 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 YYL+R Y A Q +A Y A + R++ AY L A Sbjct: 293 NYYLQRERYQDASASAQAYIAAYPAATDRSDFHDRIIAAYEQGGLPSLA 341 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 2/99 (2%) Query: 42 SSRDVYLDSVTDVRYQREVYEKA--VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 S +V + ++ + E++ A + + ++ A E + + P + L Sbjct: 75 SDPEVRIKALHRLINLEELFYDAKPQGLIDDDIWNIAIESYEALLQRQPGDKGNDRVLYQ 134 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 A G+ +A E + QYP S ++ +G Sbjct: 135 LARANGMLGQTDKALISLERLVGQYPRSGYATEAWFRIG 173 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 60/209 (28%), Gaps = 36/209 (17%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A YF+ FP G ++L + + +++ A ++ YP+ Sbjct: 402 QNAVAYFDGMEEIFPSEGKTAEALYLQGEAYFLLEEWELAVRAYDKAGYFYPDFPKRSEA 461 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Y + ++ + D + + R + + + AA E Sbjct: 462 AYASVNALSKAVDANLKDSALRSRRVDALLRFAKTFPRDSRATESLL--------FAANE 513 Query: 194 VEIGRYY------------------LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + Y ++ + A L+ Y +EHA Sbjct: 514 LYAMEQYGAALDAATQTASFTEDKAIRNAAWTIAGHSA-FALSRYQGSEHAYR------- 565 Query: 236 AYVALALMDEAREVVSLIQERYPQGYWAR 264 AL+L ++ E + +++ Sbjct: 566 --QALSLRSRKASDYDVLMENFAASIYSQ 592 Score = 37.8 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 8/74 (10%) Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A E + + P K D V Y + + + T L + R+V +Y S Sbjct: 111 AIESYEALLQRQPGDKGNDRVLYQLARANGML--------GQTDKALISLERLVGQYPRS 162 Query: 173 PYVKGARFYVTVGR 186 Y A F + R Sbjct: 163 GYATEAWFRIGELR 176 >gi|323495159|ref|ZP_08100244.1| TPR repeat-containing protein [Vibrio brasiliensis LMG 20546] gi|323310599|gb|EGA63778.1| TPR repeat-containing protein [Vibrio brasiliensis LMG 20546] Length = 258 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 23/128 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A + +++ YP+S +Y +G Y +D K ++ + + Sbjct: 153 KKRDYTGAIAAFQQFQKDYPDSSFTPNSHYWLGQLYFAKKQD--------KDAVKSFAAV 204 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 + Y +S A + + A FQ V+ Y ++ Sbjct: 205 IT-YKDSNKRADALVKLGEIAE--------------RNNNSAQAKKYFQQVVDEYPNSAS 249 Query: 226 AEEAMARL 233 A+ A ARL Sbjct: 250 AKLAQARL 257 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + + Y +S + + +++ G+ Y Sbjct: 144 YQNAVDLILKKRDYTGAIAAFQQFQKDYPDSSFTPNSHYWL--------------GQLYF 189 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A+ F V+ Y D+ +A+ +L E +A++ + + YP Sbjct: 190 AKKQDKDAVKSFAAVI-TYKDSNKRADALVKLGEIAERNNNSAQAKKYFQQVVDEYPNSA 248 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 249 SAKLAQARLK 258 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 51/128 (39%), Gaps = 10/128 (7%) Query: 57 QREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ Y+ AV LK+++++ A F Q +D+P + S + ++ + + A Sbjct: 140 EQTAYQNAVDLILKKRDYTGAIAAFQQFQKDYPDSSFTPNSHYWLGQLYFAKKQDKDAVK 199 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 IT +K D + ++ + + +Y ++V+ Y NS Sbjct: 200 SFAAVITYKDSNKRAD--------ALVKLGEIAERNNNSA-QAKKYFQQVVDEYPNSASA 250 Query: 176 KGARFYVT 183 K A+ + Sbjct: 251 KLAQARLK 258 >gi|256846394|ref|ZP_05551851.1| tetratricopeptide repeat family protein [Fusobacterium sp. 3_1_36A2] gi|256718163|gb|EEU31719.1| tetratricopeptide repeat family protein [Fusobacterium sp. 3_1_36A2] Length = 936 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 68/188 (36%), Gaps = 14/188 (7%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 +Q+ + A FL ++N A + + + + + S++ V Y+ Y + Sbjct: 123 KKTFQKTFFAVAQNFLAKENNEAAQKAYKEIIDN-KYENYKE-SMMGLGIVYYNLKDYDK 180 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A E+ + P+ +N + V YL + + T + + ++ Sbjct: 181 AIYWLSEFSKEMPK-ENKEMVSYLRASALYRK--------GNTDEAISRFEELANIEPST 231 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN-YSDAEHAEEAMA 231 Y + A Y+ + K+ +YL R + ++ + Y E+ ++A+ Sbjct: 232 EYSRKAALYLIEIYSN--RKDEAKVTFYLNRIKGTKEYNTAMTMIGDLYVTKENYDKALD 289 Query: 232 RLVEAYVA 239 ++ Sbjct: 290 YYNQSNDK 297 Score = 42.0 bits (98), Expect = 0.093, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 67/206 (32%), Gaps = 33/206 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K + + + +A F + + ++ K L + A +Y +A GE+Y Sbjct: 508 YLKGIAAMGLGKYDEAESEFQKVLASGDQS-LSTKVYLNRVRNYFLAERYNEAVQAGEQY 566 Query: 121 ITQYPESKNVDYVYY-----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 +++ S + D V Y +G+SY ++ + YDQ Y Sbjct: 567 LSK--LSPDKDKVIYSEMLDKIGLSYFRLGK---YDQARAY-----------------YS 604 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 K A + +I Y Y A ++ V + + + E+A + + Sbjct: 605 KIASMKGYEVYGK-----FQIADSYYNEKNYEKAASLYKEVYNQFGETFYGEQAYYKYIM 659 Query: 236 AYVALALMDEAREVVSLIQERYPQGY 261 D + YP Sbjct: 660 TLSLTGNTDAFEREKDNFMKVYPNSN 685 >gi|229514669|ref|ZP_04404130.1| TPR domain protein in aerotolerance operon [Vibrio cholerae TMA 21] gi|229348649|gb|EEO13607.1| TPR domain protein in aerotolerance operon [Vibrio cholerae TMA 21] Length = 656 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 14/133 (10%) Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63 +L A+C+F F+L + F +++ W S + D + E Y + Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361 Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117 A ++ + A Y+ + ++ + A AG+ Q+A L Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420 Query: 118 EEYITQYPESKNV 130 E+ + Q P ++ Sbjct: 421 EQVLKQEPNHQDA 433 >gi|237741251|ref|ZP_04571732.1| tetratricopeptide repeat family protein [Fusobacterium sp. 4_1_13] gi|229430783|gb|EEO40995.1| tetratricopeptide repeat family protein [Fusobacterium sp. 4_1_13] Length = 936 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 68/188 (36%), Gaps = 14/188 (7%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 +Q+ + A FL ++N A + + + + + S++ V Y+ Y + Sbjct: 123 KKTFQKTFFAVAQNFLAKENNEAAQKAYKEIIDN-KYENYKE-SMMGLGIVYYNLKDYDK 180 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A E+ + P+ +N + V YL + + T + + ++ Sbjct: 181 AIYWLSEFSKEMPK-ENKEMVSYLRASALYRK--------GNTDEAISRFEELANIEPST 231 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN-YSDAEHAEEAMA 231 Y + A Y+ + K+ +YL R + ++ + Y E+ ++A+ Sbjct: 232 EYSRKAALYLIEIYSN--RKDEAKVTFYLNRIKGTKEYNTAMTMIGDLYVTKENYDKALD 289 Query: 232 RLVEAYVA 239 ++ Sbjct: 290 YYNQSNDK 297 Score = 38.9 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 64/206 (31%), Gaps = 33/206 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K + + + +A F + + ++ K L + A +Y +A GE+Y Sbjct: 508 YLKGIAAMGLGKYDEAESEFQKVLASGDQS-LSTKVYLNRVRNYFLAERYNEAVQAGEQY 566 Query: 121 ITQYPESKNVDYVYY-----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 +++ S + D V Y +G+SY ++ Y Y Sbjct: 567 LSK--LSPDKDKVIYSEMLDKIGLSYFRL--------GKYNQARAY------------YS 604 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 K A + +I Y Y A ++ V + + + E+A + + Sbjct: 605 KIASIKGYEVYGK-----FQIADSYYNEKNYEKAASLYKEVYNQFGETFYGEQAYYKYIM 659 Query: 236 AYVALALMDEAREVVSLIQERYPQGY 261 D + YP Sbjct: 660 TLSLTGNTDAFEREKDNFMKVYPNSN 685 >gi|218438707|ref|YP_002377036.1| hypothetical protein PCC7424_1733 [Cyanothece sp. PCC 7424] gi|218171435|gb|ACK70168.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424] Length = 538 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 27/211 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ + + + +A E F + P + + + + +Y QA E+ Sbjct: 344 QRGNALIGLKRYEEALESFEKALSLEPNYGE----AWRNRSVALWHLEEYPQALMSVEQA 399 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 IT P ++ + Q Q+ + + + + + Sbjct: 400 ITINPMDSQ---AWFNKAIILTQ--------QKQYNEAITAYDQALAG---NINYQSPSA 445 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 V + NQ A + + +Y AA+ Q L D+ +A+ A ++L Sbjct: 446 KVPILVNQSA--------VFWQLKQYQAALLSAQSALDLNPDSLAKTKALYNKSLALISL 497 Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271 +A E + + E P+ A+ ++ Sbjct: 498 ENYQQAEETLKYLLEIAPENQSAQDAMKFIQ 528 Score = 35.9 bits (82), Expect = 6.7, Method: Composition-based stats. Identities = 15/132 (11%), Positives = 49/132 (37%), Gaps = 11/132 (8%) Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKS--LLMSAFVQYSAGKYQQAASLG 117 + KA++ +++ +++A + + + + + K L+ + V + +YQ A Sbjct: 411 FNKAIILTQQKQYNEAITAYDQALAGNINYQSPSAKVPILVNQSAVFWQLKQYQAALLSA 470 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + + P+S Y ++ + + + + ++E + + Sbjct: 471 QSALDLNPDSLAKTKALYNKSLALISL--------ENYQQAEETLKYLLEIAPENQSAQD 522 Query: 178 ARFYVTVGRNQL 189 A ++ N + Sbjct: 523 AMKFIQQKINSM 534 >gi|313668554|ref|YP_004048838.1| periplasmic protein [Neisseria lactamica ST-640] gi|313006016|emb|CBN87475.1| putative periplasmic protein [Neisseria lactamica 020-06] Length = 238 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 SV V + +Y +A+ + FS A +A++S+ + + G Sbjct: 112 SVHTVETAQNLYNQALKHYQNGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 170 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168 + +G Y ++ +S + +G + +D+ +++ Sbjct: 171 CESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIAR---------ATWRSLIQA 221 Query: 169 YTNSP 173 Y SP Sbjct: 222 YPGSP 226 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 7/52 (13%) Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 RF+ D+ A EA+ ++ E L D AR + + YP Sbjct: 182 ANRFK-------DSPTAPEAIFKIGECQYRLQQKDIARATWRSLIQAYPGSP 226 >gi|330508422|ref|YP_004384850.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6] gi|328929230|gb|AEB69032.1| TPR-repeat protein [Methanosaeta concilii GP-6] Length = 208 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 7/82 (8%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K + ++ + +A F++ +D+P A ++ GKY++A + Sbjct: 25 YNKGIDLAEQGRYDEAIAEFDRYIQDYP--DYA-RAWYNKGVALTQQGKYEEALIAFDRV 81 Query: 121 ITQYPESKNVDY----VYYLVG 138 P++ Y V Y++G Sbjct: 82 TDIEPQNSQAWYNRGVVLYILG 103 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 15/69 (21%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 G+Y +A + + YI YP DY +Y G++ Q Q + L Sbjct: 33 EQGRYDEAIAEFDRYIQDYP-----DYARAWYNKGVALTQ--------QGKYEEALIAFD 79 Query: 164 RIVERYTNS 172 R+ + + Sbjct: 80 RVTDIEPQN 88 >gi|254415849|ref|ZP_05029606.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196177276|gb|EDX72283.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 383 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 21/118 (17%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGK 109 Y + +++ +N+ A E NQ R P +A + G Sbjct: 269 PEAYYRRGNAYVELENYQAAIEDLNQVLRLNP----------DNAVAYFSRGYSRDELGD 318 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 YQ A + + I P + D YY + + ++ Y Q + Q +I+ Sbjct: 319 YQGAIADYNQAIKLNP--EYAD-AYYDQALEDFRKAAEI-YQQEGNREWYQKAQQIIR 372 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 15/129 (11%), Positives = 37/129 (28%), Gaps = 18/129 (13%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 V + + A + ++ N+ +A Q R P ++ Sbjct: 227 PVVAQEPTAQNLISLAGIKTEKGNYQEAIADLTQALRLSPNNP---EAYYRRGNAYVELE 283 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ-RATKLMLQYMSRIVE 167 YQ A + + P++ ++Y R D+ + + ++ ++ Sbjct: 284 NYQAAIEDLNQVLRLNPDN----------AVAYF--SRGYSRDELGDYQGAIADYNQAIK 331 Query: 168 RYTNSPYVK 176 Y Sbjct: 332 LNP--EYAD 338 >gi|59801164|ref|YP_207876.1| hypothetical protein NGO0747 [Neisseria gonorrhoeae FA 1090] gi|240014091|ref|ZP_04721004.1| hypothetical protein NgonD_05483 [Neisseria gonorrhoeae DGI18] gi|240016525|ref|ZP_04723065.1| hypothetical protein NgonFA_05034 [Neisseria gonorrhoeae FA6140] gi|240115740|ref|ZP_04729802.1| hypothetical protein NgonPID1_05754 [Neisseria gonorrhoeae PID18] gi|240118036|ref|ZP_04732098.1| hypothetical protein NgonPID_06181 [Neisseria gonorrhoeae PID1] gi|240121652|ref|ZP_04734614.1| hypothetical protein NgonPI_07778 [Neisseria gonorrhoeae PID24-1] gi|240125772|ref|ZP_04738658.1| hypothetical protein NgonSK_06077 [Neisseria gonorrhoeae SK-92-679] gi|268601418|ref|ZP_06135585.1| periplasmic protein [Neisseria gonorrhoeae PID18] gi|268603749|ref|ZP_06137916.1| periplasmic protein [Neisseria gonorrhoeae PID1] gi|268684369|ref|ZP_06151231.1| periplasmic protein [Neisseria gonorrhoeae SK-92-679] gi|293399031|ref|ZP_06643196.1| hypothetical protein NGNG_00222 [Neisseria gonorrhoeae F62] gi|59718059|gb|AAW89464.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|268585549|gb|EEZ50225.1| periplasmic protein [Neisseria gonorrhoeae PID18] gi|268587880|gb|EEZ52556.1| periplasmic protein [Neisseria gonorrhoeae PID1] gi|268624653|gb|EEZ57053.1| periplasmic protein [Neisseria gonorrhoeae SK-92-679] gi|291610445|gb|EFF39555.1| hypothetical protein NGNG_00222 [Neisseria gonorrhoeae F62] Length = 237 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S V + +Y +A+ + FS A +A++S+ + + G Sbjct: 111 SAHTVETAQNLYNQALKHYQNGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 169 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168 + +G Y ++ +S V + +G + +D+ +++ Sbjct: 170 CESVIEIGGRYANRFKDSPTAPEVIFKIGECQYRLQQKDIAR---------ATWRSLIQT 220 Query: 169 YTNSP 173 Y SP Sbjct: 221 YPGSP 225 >gi|294784538|ref|ZP_06749827.1| tetratricopeptide repeat family protein [Fusobacterium sp. 3_1_27] gi|294487754|gb|EFG35113.1| tetratricopeptide repeat family protein [Fusobacterium sp. 3_1_27] Length = 936 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 68/188 (36%), Gaps = 14/188 (7%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 +Q+ + A FL ++N A + + + + + S++ V Y+ Y + Sbjct: 123 KKTFQKTFFAVAQNFLAKENNEAAQKAYKEIIDN-KYENYKE-SMMGLGIVYYNLKDYDK 180 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A E+ + P+ +N + V YL + + T + + ++ Sbjct: 181 AIYWLSEFSKEMPK-ENKEMVSYLRASALYRK--------GNTDEAISRFEELANIEPST 231 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN-YSDAEHAEEAMA 231 Y + A Y+ + K+ +YL R + ++ + Y E+ ++A+ Sbjct: 232 EYSRKAALYLIEIYSN--RKDEAKVTFYLNRIKGTKEYNTAMTMIGDLYVTKENYDKALD 289 Query: 232 RLVEAYVA 239 ++ Sbjct: 290 YYNQSNDK 297 Score = 42.0 bits (98), Expect = 0.096, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 67/206 (32%), Gaps = 33/206 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K + + + +A F + + ++ K L + A +Y +A GE+Y Sbjct: 508 YLKGIAAMGLGKYDEAESEFQKVLASGDQS-LSTKVYLNRVRNYFLAERYNEAVQAGEQY 566 Query: 121 ITQYPESKNVDYVYY-----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 +++ S + D V Y +G+SY ++ + YDQ Y Sbjct: 567 LSK--LSPDKDKVIYSEMLDKIGLSYFRLGK---YDQARAY-----------------YS 604 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 K A + +I Y Y A ++ V + + + E+A + + Sbjct: 605 KIASMKGYEVYGK-----FQIADSYYNEKNYEKAASLYKEVYNQFGETFYGEQAYYKYIM 659 Query: 236 AYVALALMDEAREVVSLIQERYPQGY 261 D + YP Sbjct: 660 TLSLTGNTDAFEREKDNFMKVYPNSN 685 >gi|289192108|ref|YP_003458049.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22] gi|288938558|gb|ADC69313.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22] Length = 566 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 68/214 (31%), Gaps = 43/214 (20%) Query: 62 EKAVLFLKEQNFSKAYE-YFNQCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +A +L E + KA E Y + A+ Y KY A E Sbjct: 19 TEANYYLDEGIYDKAVECYLKALEKKNNNPIDW-----FNLAYALYHLQKYDSALEAINE 73 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P + Y YL G+ + + I+ Y Y+K A Sbjct: 74 ALKISPSNV---YFAYLKGLIHYKR------------------GEILVAY---KYLKNAS 109 Query: 180 FYV--TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 + L G +K G Y A+ + L +Y A+ + + Y Sbjct: 110 EKIKNDELFEIL-------GDISVKYGRYEEAL---KYYLKSYKINSKNLNALFKAGKVY 159 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + +D+A + + I + P + VE + K Sbjct: 160 LLFGDIDKAYDTFNKILKENPNHECKKIVECMEK 193 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 67/210 (31%), Gaps = 47/210 (22%) Query: 73 FSKAYEYFNQCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 + KA EY ++ F + A+K + Y G A + I P++ Sbjct: 250 YKKALEYIDKSISIFNRSLYYAKK-----GDILYKLGDEDGAIEAYNKAIKLNPQNP--- 301 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-------------------- 171 Y Y+ + + Y + + + +++E Y Sbjct: 302 YAYFGLAILYYRK--------GELEKSSNFFDKVLETYLEELSEEDISILNLYSLIGKAE 353 Query: 172 ----SPYVKGARFYVTVGRNQL-AAKEVEIGRY-YLKRGEYVAAIPRFQLVLANYSDAEH 225 S Y A YV N +++ + Y Y K G Y A F L Sbjct: 354 TTGISRYYYEAMKYVDNLINMENSSRWWYVKGYIYYKLGNYKDAYESFINALRVNPKDID 413 Query: 226 AEEAMARLVEAYVALALMDEA-REVVSLIQ 254 +++A ++E +DEA +++ Sbjct: 414 TLKSLAIVLE---KSGKIDEAITTYTKILK 440 >gi|213410593|ref|XP_002176066.1| mitochondrial TOM complex subunit Tom70 [Schizosaccharomyces japonicus yFS275] gi|212004113|gb|EEB09773.1| mitochondrial TOM complex subunit Tom70 [Schizosaccharomyces japonicus yFS275] Length = 638 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 20/127 (15%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF---NQCSRDFPFAGVARKSLLMS 100 + Y +A + +F+KA + + N+ F + + Sbjct: 414 KTFEKAESVSTTDPDLYYHRAQVHFISGDFAKAIKDYRKSNELDDTFIYGY------IQL 467 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A QY + + ++A E ++P+S V Y YY ++ DQ+ L Sbjct: 468 AVAQYKSNEVEEAVKTFEMCKERFPDSGEV-YNYY----------GEILLDQQKFDEALD 516 Query: 161 YMSRIVE 167 + R +E Sbjct: 517 HFDRAIE 523 >gi|86134843|ref|ZP_01053425.1| aerotolerance-related exported protein [Polaribacter sp. MED152] gi|85821706|gb|EAQ42853.1| aerotolerance-related exported protein [Polaribacter sp. MED152] Length = 252 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 34/78 (43%), Gaps = 7/78 (8%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQ 112 + +++++E A K+QN+ KA E++ + + S L Y + Sbjct: 18 QDEQKIFESANEMYKQQNYEKAIEFYKTLEKRNLVS-----SELFYNIGNAHYKLNEVGP 72 Query: 113 AASLGEEYITQYPESKNV 130 A E+ + P++++V Sbjct: 73 AIFYYEKALQLDPDNEDV 90 >gi|289662176|ref|ZP_06483757.1| hypothetical protein XcampvN_03498 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667992|ref|ZP_06489067.1| hypothetical protein XcampmN_05688 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 604 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 38/111 (34%), Gaps = 9/111 (8%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 ++ + VC L + + + L D Q+ + + V ++ +F+ A + Sbjct: 324 FRRRAVVAVLAMVCVLPLAQPAHAANGSLWQRADQVQQQRL-DAGVQAYRKGDFATAQKA 382 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 F + L G+Y A + + + Q+P ++ Sbjct: 383 FEAVP--------TDEGLYNLGNALARQGQYDAAIAAYDRALKQHPNQQDA 425 >gi|194221768|ref|XP_001489102.2| PREDICTED: similar to intraflagellar transport 88 homolog [Equus caballus] Length = 825 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 35/259 (13%), Positives = 76/259 (29%), Gaps = 55/259 (21%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99 Q+S L +D + K ++ KA E++ D + +L Sbjct: 469 QASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYN 524 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIR 146 + +A ++ + +N V Y + Y Q+I Sbjct: 525 IGLTYKKLNRLDEALDC---FLKLHAILRNSAQVLYQIAHVYELMEDPNQAIEWLMQLIS 581 Query: 147 DVPYDQRATKL-------------MLQYMSRIVERYT--------------NSPYVKGAR 179 VP D RA QY + ++ + + A Sbjct: 582 VVPTDSRALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAI 641 Query: 180 FYVT---VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 Y + + ++ + + + G Y A+ ++ + + + E + LV Sbjct: 642 QYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPE---NVECLRFLVRL 698 Query: 237 YVALALMDEAREVVSLIQE 255 + L E +E + ++ Sbjct: 699 CTDIGLK-EVQEYATKLKR 716 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 74/233 (31%), Gaps = 67/233 (28%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KA+ +L++++F++A E + + V + +F+ Y ++ QA+S Sbjct: 421 NKAITYLRQKDFNQAVETLKMFEKKD--SRVKSAAATNLSFLYYLENEFAQASSYADLAV 478 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 479 NSDRY---NPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNR- 534 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y + Sbjct: 535 -------LDEALDCFLKLHAILRNS-----------------AQVLYQIAHVYELMEDPN 570 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 AI + ++ S A+++L E Y + +A + +P Sbjct: 571 QAI---EWLMQLISVVPTDSRALSKLGELYDSEGDKSQAFQYYYESYRYFPSN 620 >gi|118602527|ref|YP_903742.1| TPR repeat-containing protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567466|gb|ABL02271.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 222 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 16/127 (12%), Positives = 42/127 (33%), Gaps = 10/127 (7%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + +Y +A L + +A + F Q +P A + + A Sbjct: 91 QKAKRIYTQARSLLVTDQYDQAIKLFKQYLATYPNNNYTSDVQYWLAKSYLAKDNFYNAR 150 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMSRIVERYTNSP 173 + + Q P Y S ++ R + +Q+ ++ ++ ++ + Sbjct: 151 NAFVAFQKQNPLH-------YKFSNSLFELARVYIELNQQD--KARSLLNTMLVKFPSHK 201 Query: 174 YVKGARF 180 + A+ Sbjct: 202 IINRAKQ 208 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 40/114 (35%), Gaps = 14/114 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 ++ + + Y N+ Y +++ LA + +Y R +VA Sbjct: 111 QAIKLFKQYLATYPNNNYTSDVQYW-------LAKSYLAKDNFYNARNAFVA-------F 156 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 ++ L Y+ L D+AR +++ + ++P + L+ Sbjct: 157 QKQNPLHYKFSNSLFELARVYIELNQQDKARSLLNTMLVKFPSHKIINRAKQLL 210 >gi|108760033|ref|YP_631571.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622] gi|108463913|gb|ABF89098.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622] Length = 1219 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 50/154 (32%), Gaps = 30/154 (19%) Query: 144 MIRDVPYDQRATKL---MLQYMSRIVERYTN-SPYVKGARFYVTVGRNQLAAK--EVEIG 197 I D D A K + R++ + + +P + ++ + + ++E+ Sbjct: 116 RIPDAKRDALADKKRDEAIAAFKRLIPKLRDGNPQKAEMLYRLSELYWEKSKYLYQLEMT 175 Query: 198 RYYLKRGEYVAAIPR------------------------FQLVLANYSDAEHAEEAMARL 233 R+ EY AA+ R ++ +L Y D +E + + Sbjct: 176 RFLAAEKEYDAAVARGEKVEPPKKNHADSERYRTETMGIYEDILRAYPDYPQRDEVLFSM 235 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 Y L ++A + +P+ + Sbjct: 236 GYNYYELGRREDAVARYEELIRDFPKSQFVPDAY 269 Score = 38.6 bits (89), Expect = 0.88, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 32/60 (53%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 KE+N KA E F + DFP + A ++L + + AG+ + + GE ++ +YP S Sbjct: 749 KEKNPKKAAEEFLRFVSDFPKSENADRALTYAMVIAQEAGEIDKGLAAGERFLKEYPRSP 808 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 49/121 (40%), Gaps = 12/121 (9%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKE-----QNFSKAYEY-------FNQCSRDFP 88 + S+ +Y +T + Y+ AV ++ +N + + Y + R +P Sbjct: 164 EKSKYLYQLEMTRFLAAEKEYDAAVARGEKVEPPKKNHADSERYRTETMGIYEDILRAYP 223 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 + L + Y G+ + A + EE I +P+S+ V Y +G Y + + + Sbjct: 224 DYPQRDEVLFSMGYNYYELGRREDAVARYEELIRDFPKSQFVPDAYIQLGNHYFENNKLI 283 Query: 149 P 149 P Sbjct: 284 P 284 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 8/90 (8%) Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 V ++AA +++ +P+S+N D ++YA +I + L Sbjct: 746 VYKKEKNPKKAAEEFLRFVSDFPKSENAD-----RALTYAMVIAQ---EAGEIDKGLAAG 797 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 R ++ Y SP+ AR+ + ++A Sbjct: 798 ERFLKEYPRSPFELKARYSLAGLYEKVAEY 827 Score = 35.5 bits (81), Expect = 9.3, Method: Composition-based stats. Identities = 9/76 (11%), Positives = 22/76 (28%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 D+ + ++ + + A + + RDFP + + + Sbjct: 216 EDILRAYPDYPQRDEVLFSMGYNYYELGRREDAVARYEELIRDFPKSQFVPDAYIQLGNH 275 Query: 104 QYSAGKYQQAASLGEE 119 + K A E+ Sbjct: 276 YFENNKLIPAKENYEK 291 >gi|113474798|ref|YP_720859.1| hypothetical protein Tery_1009 [Trichodesmium erythraeum IMS101] gi|110165846|gb|ABG50386.1| TPR repeat [Trichodesmium erythraeum IMS101] Length = 273 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 30/261 (11%), Positives = 70/261 (26%), Gaps = 68/261 (26%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 + + K +TI CF ++ + + ++++A+ F+ Sbjct: 2 LHLIQKLFITILLFFLFCFSNPSNVIAATQSQNITPAQLEELHNLFDQALNASNNGEFAN 61 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A + + Q I YP++ + Sbjct: 62 AEKLWTQI-------------------------------------IELYPDNPAI----- 79 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 ++ Q + + + +E A + ++ Sbjct: 80 ------WSNRGNIRLSQNKIEEAISDYEKAIEILP---LAPDAYLNRGIAYERIKKWSEA 130 Query: 196 IGRY-------------YLKRGEYVAAIPRFQLVLANYSD-AEHAEE---AMARLVEAYV 238 I Y Y RG + +++ +Y +E A E A+A A Sbjct: 131 IADYNQVIELDPTDPVAYNNRGNAEGGLGKWEKATEDYKKASELAPEYAFALANYSLALY 190 Query: 239 ALALMDEAREVVSLIQERYPQ 259 + +A + + + +YP Sbjct: 191 QIGQTQKAVQTMKSLVRKYPN 211 >gi|327193464|gb|EGE60360.1| hypothetical protein RHECNPAF_157007 [Rhizobium etli CNPAF512] Length = 329 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 47/142 (33%), Gaps = 14/142 (9%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 + + + + + Y+ A + ++ A + FNQ +P + Sbjct: 181 ATIGSGPIPDANGKTPQQTASLGSEADQYKAAYGHVLSGDYGTAEQEFNQYIAHYPSSAR 240 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP---ESKNVDYVYYLVGMSYAQMIRDVP 149 A + YS GKY +A + ++ + S+ + +GMS A + Sbjct: 241 AADANFWLGEALYSQGKYNEA---AKTFLNAHQKYGSSEKAPEMLLKLGMSLAALDNK-- 295 Query: 150 YDQRATKLMLQYMSRIVERYTN 171 + + + +RY Sbjct: 296 ------ETACATLREVSKRYPK 311 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 Q ++ + Y +S A F++ +G+Y A F Sbjct: 224 AEQEFNQYIAHYPSSARAADANFWLGEAL--------------YSQGKYNEAAKTFLNAH 269 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y +E A E + +L + AL + A + + +RYP+ Sbjct: 270 QKYGSSEKAPEMLLKLGMSLAALDNKETACATLREVSKRYPKAS 313 >gi|325279499|ref|YP_004252041.1| hypothetical protein Odosp_0784 [Odoribacter splanchnicus DSM 20712] gi|324311308|gb|ADY31861.1| hypothetical protein Odosp_0784 [Odoribacter splanchnicus DSM 20712] Length = 1153 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 48/151 (31%), Gaps = 12/151 (7%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y ++A + YI ++ + N+ VYYL +Y + Sbjct: 563 YRLNDPEKALECFDAYIQRFKNTANLPMVYYL--------ASTTALKAGKAAEAERYKTE 614 Query: 165 IVERYTNSPYVKGAR--FYVTVGRNQL--AAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 + + S + +G + Y + L K+ + Y ++ Y A +L Y Sbjct: 615 LTALFPESDFARGLQDPNYFRQVEDVLKVVEKKYQEAYRYYQKVYYHEAAQICDRILKAY 674 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVS 251 D + + V EA+ + Sbjct: 675 PDNKLKANVLFLKAMCVVNTGSPQEAKNALE 705 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 40/129 (31%), Gaps = 26/129 (20%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR---------KSL---------LMSA 101 Y + LK ++A Y + + FP + AR + A Sbjct: 592 YYLASTTALKAGKAAEAERYKTELTALFPESDFARGLQDPNYFRQVEDVLKVVEKKYQEA 651 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + Y Y +AA + + + YP++K V +L M + + Sbjct: 652 YRYYQKVYYHEAAQICDRILKAYPDNKLKANVLFLKAMCVVNT--------GSPQEAKNA 703 Query: 162 MSRIVERYT 170 + ++ Sbjct: 704 LEEVIAARP 712 >gi|262171201|ref|ZP_06038879.1| TPR repeat-containing protein [Vibrio mimicus MB-451] gi|261892277|gb|EEY38263.1| TPR repeat-containing protein [Vibrio mimicus MB-451] Length = 253 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 55/143 (38%), Gaps = 14/143 (9%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 S+ + + + ++ Y+ AV LK++++ A F + D+P + + S Sbjct: 119 SSNDEAAQGTFSSDANEQAAYQNAVDLILKKRDYEGAIAAFKKFQTDYPNSTFSANSHYW 178 Query: 100 SAFVQYSAGKYQQAASLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + ++ + ++A + +I + +S +G D+ + Sbjct: 179 LGQLYFAKKEDKEA---AKSFIAVVSHQDSNKRADALVKLG--------DIAKRNNNAEQ 227 Query: 158 MLQYMSRIVERYTNSPYVKGARF 180 ++ + ++ Y +S K A+ Sbjct: 228 ARKFYQQAIDEYPDSASAKVAKE 250 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + + Y NS + A +G+ Y Sbjct: 139 YQNAVDLILKKRDYEGAIAAFKKFQTDYPNSTFS--------------ANSHYWLGQLYF 184 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + E A F V+++ D+ +A+ +L + ++AR+ + YP Sbjct: 185 AKKEDKEAAKSFIAVVSH-QDSNKRADALVKLGDIAKRNNNAEQARKFYQQAIDEYPDSA 243 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 244 SAKVAKESLK 253 >gi|257469130|ref|ZP_05633224.1| TPR repeat-containing protein [Fusobacterium ulcerans ATCC 49185] Length = 950 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 86/232 (37%), Gaps = 36/232 (15%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 Y+R +Y+ + +L ++N+ KA E F + + +++L A Y+ Y++ Sbjct: 130 YERALYDSGMTYLAKENYKKAEELFQRVIQLN--KKYYSEAVLSMAMSAYNQADYKRTLL 187 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 EY ++KN YL G +Y ++ +T + Y ++ + S Y Sbjct: 188 FLNEYSNGKDKNKNQSLFNYLYGSAYYKL--------NSTDDAITYFQKVTSKDKTSSYG 239 Query: 176 KGARFYVTVG----------RNQLAA----KEV-----EIGRYYLKRGEYVAAIPRFQLV 216 K + + + LA KE IG Y RGEY A+ + Sbjct: 240 KKSVLSLIEIYSNRGDVNSMQKYLAMLENTKEYGEAMRMIGDLYATRGEYEKAVSYYSKT 299 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER--YPQGYWARYV 266 + + + M + L + EA++ ++ Y Q + + Sbjct: 300 -----NTPNDPKLMYGYGFSLYKLNRLKEAQKYFEGLRNTTYYNQSIYYIFA 346 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 41/106 (38%), Gaps = 15/106 (14%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q+ + + ++RY +S Y + + I + Y + +Y AI Sbjct: 35 QKKFSMAITESVSFLKRYPDSRYTRNIQDR--------------IAKTYFLQEDYNNAIK 80 Query: 212 RFQLVLANYS-DAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 F+++L N A+ +E L+ +Y AL + + + + Sbjct: 81 YFKIILMNNDVKAKEKDEINFYLMRSYTALGDAKNSDFFMESLDKN 126 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 77/224 (34%), Gaps = 35/224 (15%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--RKSLLMSAFV 103 VYL+ + +Y K + F+ +++A FNQ D + A K Sbjct: 500 VYLNDEGTENTKDNIYLKGIAFVGMGKYAEADTAFNQLEAD-TTSDAALLTKVKFNKMRN 558 Query: 104 QYSAGKYQQAASLGEEYITQ-YPESKN--VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + GKY+ A GEEY+T PE KN +D + +SY ++ + + Sbjct: 559 YFLWGKYEDAIKYGEEYLTLENPEGKNEIMD----KLAISYFRIDN--------FEKSRE 606 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 Y +++ Y R +I Y + A ++ V Y Sbjct: 607 YYNKL----------SAVPEYEAYCR-------FQIADTYYAEKNFEKAKEEYKHVAEQY 649 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 D ++ E+A + + L + + +YP Sbjct: 650 GDGQYGEKAYYWYLTTLINLGETETFEKEKDAFLVKYPGSKMRD 693 >gi|268590334|ref|ZP_06124555.1| putative tol-pal system protein YbgF [Providencia rettgeri DSM 1131] gi|291314243|gb|EFE54696.1| putative tol-pal system protein YbgF [Providencia rettgeri DSM 1131] Length = 263 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 41/112 (36%), Gaps = 14/112 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + ++ Y S Y A +++ Y K + AA F V Sbjct: 161 QAIGALQGFIKAYPKSGYQSNANYWLGQLN-------------YNKGSKDDAAFY-FATV 206 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + Y ++ + EA+ ++ D+A+ V + ++YP ++ E Sbjct: 207 VKQYPKSQKSSEALYKVGLIMQDKGQKDKAKAVYQQVLKQYPNSAGSKLAEK 258 Score = 43.2 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 12/133 (9%) Query: 57 QREVYEKAVL-FLKEQ---NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 +++ Y AV ++ + +A + +P +G + + Y+ G Sbjct: 139 EKDDYNAAVKLAMESKSKAQIDQAIGALQGFIKAYPKSGYQSNANYWLGQLNYNKGSKDD 198 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 AA + QYP+S+ Y VG+ + D+ +++++Y NS Sbjct: 199 AAFYFATVVKQYPKSQKSSEALYKVGL--------IMQDKGQKDKAKAVYQQVLKQYPNS 250 Query: 173 PYVKGARFYVTVG 185 K A ++ Sbjct: 251 AGSKLAEKKLSTL 263 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 44/155 (28%), Gaps = 43/155 (27%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 ++ +++ A + K+ + QA + +I YP+S Sbjct: 139 EKDDYNAAVKL--AMESK-------SKAQID------------QAIGALQGFIKAYPKSG 177 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 Y +G + Y + +V++Y S A + V + Sbjct: 178 YQSNANYWLGQLNYNK--------GSKDDAAFYFATVVKQYPKSQKSSEALYKVGLIMQD 229 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 K+ Y Q VL Y ++ Sbjct: 230 KGQKDKAKAVY--------------QQVLKQYPNS 250 >gi|282877520|ref|ZP_06286338.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310] gi|281300344|gb|EFA92695.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310] Length = 870 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 21/71 (29%), Gaps = 8/71 (11%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEE 119 E A K N+ +A + + + + + L Y QA E Sbjct: 646 ENADTEYKRGNYQQAIKDYEELLKK------GVNADLYYNLGNAYYRTDNITQAILAYER 699 Query: 120 YITQYPESKNV 130 + P ++ Sbjct: 700 ALMLSPGDDDI 710 >gi|225620560|ref|YP_002721817.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] gi|225215379|gb|ACN84113.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] Length = 257 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 53/144 (36%), Gaps = 17/144 (11%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + YE+ + + KE+ + +A E F++ P + + + G+Y++A Sbjct: 2 SSEQYYEEGLNYFKERKYKEAIESFDKVIELAPNNS---NAYYNRGVSKENLGQYKEAIK 58 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 ++ I P ++D+ Y G++ + + ++ + +E N Sbjct: 59 DYDKAIELNPN--DIDF-YNDRGIAKYNL--------GQYEEAIKDYDKAIELNPND--- 104 Query: 176 KGARFYVTVGRNQLAAKEVEIGRY 199 + + + L E I Y Sbjct: 105 SDSYNNRGIAKKNLGQYEESIKDY 128 >gi|317063377|ref|ZP_07927862.1| tetratricopeptide repeat family protein [Fusobacterium ulcerans ATCC 49185] gi|313689053|gb|EFS25888.1| tetratricopeptide repeat family protein [Fusobacterium ulcerans ATCC 49185] Length = 945 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 86/232 (37%), Gaps = 36/232 (15%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 Y+R +Y+ + +L ++N+ KA E F + + +++L A Y+ Y++ Sbjct: 125 YERALYDSGMTYLAKENYKKAEELFQRVIQLN--KKYYSEAVLSMAMSAYNQADYKRTLL 182 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 EY ++KN YL G +Y ++ +T + Y ++ + S Y Sbjct: 183 FLNEYSNGKDKNKNQSLFNYLYGSAYYKL--------NSTDDAITYFQKVTSKDKTSSYG 234 Query: 176 KGARFYVTVG----------RNQLAA----KEV-----EIGRYYLKRGEYVAAIPRFQLV 216 K + + + LA KE IG Y RGEY A+ + Sbjct: 235 KKSVLSLIEIYSNRGDVNSMQKYLAMLENTKEYGEAMRMIGDLYATRGEYEKAVSYYSKT 294 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER--YPQGYWARYV 266 + + + M + L + EA++ ++ Y Q + + Sbjct: 295 -----NTPNDPKLMYGYGFSLYKLNRLKEAQKYFEGLRNTTYYNQSIYYIFA 341 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 41/106 (38%), Gaps = 15/106 (14%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q+ + + ++RY +S Y + + I + Y + +Y AI Sbjct: 30 QKKFSMAITESVSFLKRYPDSRYTRNIQDR--------------IAKTYFLQEDYNNAIK 75 Query: 212 RFQLVLANYS-DAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 F+++L N A+ +E L+ +Y AL + + + + Sbjct: 76 YFKIILMNNDVKAKEKDEINFYLMRSYTALGDAKNSDFFMESLDKN 121 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 77/224 (34%), Gaps = 35/224 (15%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--RKSLLMSAFV 103 VYL+ + +Y K + F+ +++A FNQ D + A K Sbjct: 495 VYLNDEGTENTKDNIYLKGIAFVGMGKYAEADTAFNQLEAD-TTSDAALLTKVKFNKMRN 553 Query: 104 QYSAGKYQQAASLGEEYITQ-YPESKN--VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + GKY+ A GEEY+T PE KN +D + +SY ++ + + Sbjct: 554 YFLWGKYEDAIKYGEEYLTLENPEGKNEIMD----KLAISYFRIDN--------FEKSRE 601 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 Y +++ Y R +I Y + A ++ V Y Sbjct: 602 YYNKL----------SAVPEYEAYCR-------FQIADTYYAEKNFEKAKEEYKHVAEQY 644 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 D ++ E+A + + L + + +YP Sbjct: 645 GDGQYGEKAYYWYLTTLINLGETETFEKEKDAFLVKYPGSKMRD 688 >gi|290988442|ref|XP_002676930.1| predicted protein [Naegleria gruberi] gi|284090535|gb|EFC44186.1| predicted protein [Naegleria gruberi] Length = 249 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 32/235 (13%), Positives = 78/235 (33%), Gaps = 42/235 (17%) Query: 60 VYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y + + + N+S+A + ++ + F+ + L M + ++++A + E Sbjct: 30 YYNRGNISRRRGNYSEALKDYDRALELNANFS----QVLTMRGATYFEIEEFEKAIADCE 85 Query: 119 EYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 I P ++ N + G SY + + ++ + +++ Sbjct: 86 RSIALDPSDNCN----LLVRGKSYFK-----------SGNLIAAFADLMDYLKTEQNNSD 130 Query: 178 ARFYVTVGRNQLAA----KE--VEIGR--------YYLK------RGEYVAAIPRFQLVL 217 A Y+ + E + IG Y + Y AI + ++ Sbjct: 131 ALSYLVKLYKIMKQFDTAYEFLLHIGEIEGLSFENVYERAECLEEMKNYPLAIKHWTAIM 190 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLVK 271 N E + R + Y+ A ++ S+I+ + + L++ Sbjct: 191 DNEPQNPRIMEILLRRGQCYMENKEFSNAIKDFQSVIESTSSENELKESAKQLIQ 245 Score = 35.5 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 47/162 (29%), Gaps = 35/162 (21%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y ++ A I P + ++ + L+ Sbjct: 3 YYRMKEFNGAFDDFTRAIQLNPNDP-----------IHYYNRGNISRRRGNYSEALKDYD 51 Query: 164 RIVERYTNSPYVKGARFY------VTVGRNQLAAKEVEIG-------------RYYLKRG 204 R +E N+ + + + +A E I + Y K G Sbjct: 52 RALEL--NANFSQVLTMRGATYFEIEEFEKAIADCERSIALDPSDNCNLLVRGKSYFKSG 109 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +AA F ++ ++ +A++ LV+ Y + D A Sbjct: 110 NLIAA---FADLMDYLKTEQNNSDALSYLVKLYKIMKQFDTA 148 >gi|300772773|ref|ZP_07082643.1| OmpA family outer membrane protein [Sphingobacterium spiritivorum ATCC 33861] gi|300761076|gb|EFK57902.1| OmpA family outer membrane protein [Sphingobacterium spiritivorum ATCC 33861] Length = 628 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 40/122 (32%), Gaps = 19/122 (15%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYS 106 + +++Y A L++ +S A E + +F + + Sbjct: 20 KPSGNAKAQQLYTSANRHLQKGEYSPAIELLKEAVKIDGNFA-SAYQT-----LGDLYRK 73 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 +Y++A + E+ + PE L ++Y I + K L Y+ Sbjct: 74 TDQYEEARQMYEKVLKTDPE---------LTPLTYFG-IGESSLFTGHYKEALNYLETYK 123 Query: 167 ER 168 + Sbjct: 124 NK 125 >gi|254384605|ref|ZP_04999944.1| conserved hypothetical protein [Streptomyces sp. Mg1] gi|194343489|gb|EDX24455.1| conserved hypothetical protein [Streptomyces sp. Mg1] Length = 1033 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 66/197 (33%), Gaps = 40/197 (20%) Query: 70 EQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 + + +A F+ + D+ +A +R + G+Y++A + + P Sbjct: 594 AERYEEAIADFDRSLELRSDYEWALTSRGATFRL------MGRYEEALADFNRAVDLDPG 647 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 S + + G ++ M R + L R +E + + Sbjct: 648 S---AWAHASRGAAFNSMGR--------YEEALADFHRAIELKPDYDWP----------- 685 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 LA + G Y G + A+ F +A D A+A +Y +L +EA Sbjct: 686 --LAGR----GDVYRSLGRHEEAVAEFTRAIALTPDYWW---ALAGCGYSYTSLGRHEEA 736 Query: 247 REVVSLIQERYPQGYWA 263 V + P WA Sbjct: 737 VAVFTRAIALAPDDRWA 753 >gi|254434614|ref|ZP_05048122.1| putative PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus oceani AFC27] gi|207090947|gb|EDZ68218.1| putative PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus oceani AFC27] Length = 926 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 76/201 (37%), Gaps = 39/201 (19%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + ++ L +++ A F + + P + + ++ A Q AG ++ Sbjct: 704 EHPEVLAQEGWLAMRQNRPQDAIIAFREALKRSPTS----QIIVNLAHAQLQAGNQNESL 759 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + E+++ ++P +++ V Y + Y + ++ + + +V+R ++ Sbjct: 760 ATLEDWLKKHP--EDMV-VQYNLANLYLALKQE--------QKAASAFTTVVKRAPDN-- 806 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 V N LA + L++ + A+ + L +A + + L Sbjct: 807 --------VVALNNLA--------WLLRKNDPAKALEYAERALELAPNAPPVMDTLGML- 849 Query: 235 EAYVALALMDEAREVVSLIQE 255 L EA+ + L+++ Sbjct: 850 -----LLEKGEAKRSLRLLRK 865 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 3/71 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + +L ++Q ++ A F + P ++ + Y G+ QA L ++ Sbjct: 268 YAQGLLHFQQQQYADALTSFQKTLSKNP--EYMP-AVFYAGIAYYQQGQLTQAGQLLNQF 324 Query: 121 ITQYPESKNVD 131 + ++P S Sbjct: 325 LKRFPHSDTAA 335 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 17/135 (12%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + + ++ ++A + NQ + FP + A K+L M + G Y A ++ E I Sbjct: 304 AGIAYYQQGQLTQAGQLLNQFLKRFPHSDTAAKTLAMI---RLREGNYTSAQAILEPIIA 360 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 Q P ++ Q + Y ++ + S A + Sbjct: 361 QNPNDTAA-----------LDLLGSAILGQGKPEKSAAYFQKVTAQTPES---AAAYMKL 406 Query: 183 TVGRNQLAAKEVEIG 197 +G E IG Sbjct: 407 GLGFMMSGEHEQGIG 421 >gi|163784310|ref|ZP_02179219.1| hypothetical protein HG1285_06948 [Hydrogenivirga sp. 128-5-R1-1] gi|159880420|gb|EDP74015.1| hypothetical protein HG1285_06948 [Hydrogenivirga sp. 128-5-R1-1] Length = 687 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 61/145 (42%), Gaps = 14/145 (9%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 L D ++ Y A F + + KAYE F + + + + R+++L A Y+ Sbjct: 539 ELAEGNDEIAKQAGYLYAYSFFSNEEYDKAYEEFKKFAEKYKNDPLGRRAVLRMADSLYN 598 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 GK +A + ++I +Y SK YL+ + + ++ + + LQ V Sbjct: 599 LGKEDEAKKIYTQFIKKYAGSKEAVDAAYLLTL----LETKEAGEKSSIEKQLQSF---V 651 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAA 191 ++Y + P + + + QL+ Sbjct: 652 QKYPDYP-------KIDLLKLQLSE 669 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 85/243 (34%), Gaps = 42/243 (17%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG-- 117 +Y A + L +N+S+A Y + ++ + + SL A + Y + + Sbjct: 397 LY-TAFVLLNLENYSEAEFYLKKAYKNASDEKIKQSSLKYLADIYYFNNDDTKFIATLRQ 455 Query: 118 --------------------EEYITQYPESKNVDYVYYLVGMSYAQMIRDVP-------- 149 +++ Y + VD Y+ +S M ++ Sbjct: 456 IAKFDSKFASDMLGWYFFRKKKFEDAY--NAFVD--TYMKAVSAFNMDKEDTALKLIKNK 511 Query: 150 YDQRA-TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-YLKRGEYV 207 D+++ Y+ ++ N + + G +++A + + Y + EY Sbjct: 512 NDRKSKFLKAYVYLKKL-----NLDKARKILKELAEGNDEIAKQAGYLYAYSFFSNEEYD 566 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 A F+ Y + A+ R+ ++ L DEA+++ + ++Y A Sbjct: 567 KAYEEFKKFAEKYKNDPLGRRAVLRMADSLYNLGKEDEAKKIYTQFIKKYAGSKEAVDAA 626 Query: 268 TLV 270 L+ Sbjct: 627 YLL 629 >gi|153824999|ref|ZP_01977666.1| transporter [Vibrio cholerae MZO-2] gi|153830336|ref|ZP_01983003.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|148874179|gb|EDL72314.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|149741324|gb|EDM55358.1| transporter [Vibrio cholerae MZO-2] Length = 628 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 14/133 (10%) Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63 +L A+C+F F+L + F +++ W S + D + E Y + Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361 Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117 A ++ + A Y+ + ++ + A AG+ Q+A L Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420 Query: 118 EEYITQYPESKNV 130 E+ + Q P ++ Sbjct: 421 EQVLKQEPNHQDA 433 >gi|159043662|ref|YP_001532456.1| Tol-Pal system YbgF [Dinoroseobacter shibae DFL 12] gi|157911422|gb|ABV92855.1| Tol-Pal system YbgF [Dinoroseobacter shibae DFL 12] Length = 272 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 31/90 (34%), Gaps = 8/90 (8%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A ++ +A G AA Y YP S V +YL G + A + Sbjct: 148 AEQADFDAAQALLDNGDAAGAAEAFAAYTQTYPGSPLVAEAHYLRGQAEAAQGQWS---- 203 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYV 182 RA + L+ S + P A + + Sbjct: 204 RAARAYLESFSGS----PDGPRAPEALYRL 229 Score = 42.0 bits (98), Expect = 0.098, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 40/122 (32%), Gaps = 22/122 (18%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ ++ A L + + A E F ++ +P + + A Y G+ + A Sbjct: 148 AEQADFDAAQALLDNGDAAGAAEAFAAYTQTYPGSPL-------VAEAHYLRGQAEAAQG 200 Query: 116 LGEEYITQY-------PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 Y P+ Y +G+S A++ + D + + R Sbjct: 201 QWSRAARAYLESFSGSPDGPRAPEALYRLGLSLAELGQ---RD-----EACITLREVSVR 252 Query: 169 YT 170 + Sbjct: 253 FP 254 Score = 38.9 bits (90), Expect = 0.65, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 37/111 (33%), Gaps = 14/111 (12%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 D + + + Y SP V A R Q A +G++ A Sbjct: 160 LDNGDAAGAAEAFAAYTQTYPGSPLVAEAH----YLRGQ-AE---------AAQGQWSRA 205 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + D A EA+ RL + L DEA + + R+P G Sbjct: 206 ARAYLESFSGSPDGPRAPEALYRLGLSLAELGQRDEACITLREVSVRFPGG 256 >gi|94968620|ref|YP_590668.1| hypothetical protein Acid345_1592 [Candidatus Koribacter versatilis Ellin345] gi|94550670|gb|ABF40594.1| hypothetical protein Acid345_1592 [Candidatus Koribacter versatilis Ellin345] Length = 173 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 4/66 (6%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE- 248 A K++E+G YY KR Y A+ R+Q L + EA R+ L +++AR+ Sbjct: 78 AMKDIEVGDYYFKRENYRGALNRYQEALIYKPN---DAEATLRVARTQEKLKEVEDARDN 134 Query: 249 VVSLIQ 254 + ++ Sbjct: 135 YAAYLK 140 >gi|325287187|ref|YP_004262977.1| hypothetical protein Celly_2286 [Cellulophaga lytica DSM 7489] gi|324322641|gb|ADY30106.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga lytica DSM 7489] Length = 995 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 44/238 (18%), Positives = 78/238 (32%), Gaps = 26/238 (10%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + + YQ+ + + V EQ++ A E FN + ++ A Sbjct: 401 EKNKNYASKETYQKVAFYRGVELFLEQDYESALEAFNLSLDNAEEPKFKARANFWKAESL 460 Query: 105 YSAGKYQQAASLGEEYITQYP------ESKNVDY--VY-------YLVGMSYAQMIRDVP 149 Y K+ A + Q P E+K +DY Y Y+ SY + D Sbjct: 461 YLLNKFDDALVSFVAF-QQNPMSVSTDENKELDYNLAYTYFKLNDYVNATSYYKKYTD-S 518 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 + KL Y+ + S Y Y +N+ K+ Y + Y Sbjct: 519 RPEDEAKLNDAYLRLGDCYFVTSKYWPAIETYNIALKNRGGQKDYAA---YQRALSYGFV 575 Query: 210 ------IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 I + + YS + ++A+ L Y+ L D + + + E Y Sbjct: 576 GKSDTKISELKSFVTKYSKSTLKDDALYELGNTYIKLGNEDLGLQAYNKLIEEYKGSS 633 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 69/216 (31%), Gaps = 36/216 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT- 122 + + ++ A Y + + + + Y G Y I Sbjct: 239 GESYFNLKQYNNAIPYLTEYKGKR--GKWSNTDYYLLGYSYYKQGDYANGIDQFNNIIDG 296 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 S+N YY + Y ++ + + L + Y + + Sbjct: 297 DNSVSQN---AYYHLAECYLKLDKK--------QEALNAFKNASQM----DYSEEIKKDA 341 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV---- 238 + +L+ Y Y L Y D+EHA+E LV++Y+ Sbjct: 342 YLNYARLS---------YEIGNAYEPVPSVLTKYLETYPDSEHAKEIQELLVDSYITSKN 392 Query: 239 ---ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 AL L+++ + S +E Y + + R VE ++ Sbjct: 393 YKGALELLEKNKNYAS--KETYQKVAFYRGVELFLE 426 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 26/204 (12%), Positives = 61/204 (29%), Gaps = 21/204 (10%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y++A+ + + + + +L G + Sbjct: 566 YQRALSYGFVGKSDTKISELKSFVTKYSKSTLKDDALYELGNTYIKLGNEDLGLQAYNKL 625 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRD---------VPYDQRATKLMLQYMSRIVERYTN 171 I +Y S V G+ + R+ V D T+ +Q ++ Y + Sbjct: 626 IEEYKGSSLVPRALLRQGLVHYNASRNQQALAKFKTVVRDHAKTQEAIQAVATAKLVYVD 685 Query: 172 SPYVKGARFYVTVGRNQ----LAAKEVEIGRYYLKRGEYV-----AAIPRFQLVLANYSD 222 + Y ++ + E++ Y +++ AAI ++ + + + Sbjct: 686 ---LGKVDEYANWVKDLDFVEVTDSELDNATYESAEKQFIENKTDAAIRGYENYIKEFPN 742 Query: 223 AEHAEEAMARLVEAYVALALMDEA 246 H +A +L + Y A Sbjct: 743 GSHILDANFKLAQLYFGKGQKASA 766 Score = 35.9 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 72/209 (34%), Gaps = 32/209 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + + + A Y N+ + + ++ ++ Y YQ+A E + Sbjct: 132 FNNGYALFSSKKYKDAERYLNRVTNSATYGS---QAKYYLGYIAYEQDNYQEAN---ERF 185 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYD-------------QRATKLMLQYMSRIV- 166 + + + +SY Q + +A + + +++I+ Sbjct: 186 DQITDQDELKE------KLSYYQADMNFKLGNFEKAIALAKEQLPKADRNEVSELNKIIG 239 Query: 167 ERYTNSPYVKGARFYVTVG---RNQLAAKEVEIGRY-YLKRGEYVAAIPRFQLVLANYSD 222 E Y N A Y+T R + + + + Y Y K+G+Y I +F ++ D Sbjct: 240 ESYFNLKQYNNAIPYLTEYKGKRGKWSNTDYYLLGYSYYKQGDYANGIDQFNNIIDG--D 297 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS 251 ++ A L E Y+ L EA Sbjct: 298 NSVSQNAYYHLAECYLKLDKKQEALNAFK 326 >gi|151943403|gb|EDN61714.1| protein phosphatase T [Saccharomyces cerevisiae YJM789] gi|190406859|gb|EDV10126.1| serine/threonine-protein phosphatase T [Saccharomyces cerevisiae RM11-1a] gi|207345090|gb|EDZ72025.1| YGR123Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256270344|gb|EEU05550.1| Ppt1p [Saccharomyces cerevisiae JAY291] gi|259146625|emb|CAY79882.1| Ppt1p [Saccharomyces cerevisiae EC1118] gi|323354816|gb|EGA86649.1| Ppt1p [Saccharomyces cerevisiae VL3] Length = 513 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 20/133 (15%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL--MSAFVQY 105 + D E + +F+KE++F KA E + D + +S+ AF + Sbjct: 4 PTAADRAKALERKNEGNVFVKEKHFLKAIEKYTEAIDLD------STQSIYFSNRAFAHF 57 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +Q A + +E I P++ Y+ +S ++ K + ++ + Sbjct: 58 KVDNFQSALNDCDEAIKLDPKNIK---AYHRRALSCMALLE--------FKKARKDLNVL 106 Query: 166 VERYTNSPYVKGA 178 ++ N P A Sbjct: 107 LKAKPNDPAATKA 119 >gi|91978604|ref|YP_571263.1| hypothetical protein RPD_4143 [Rhodopseudomonas palustris BisB5] gi|91685060|gb|ABE41362.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 345 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 32/115 (27%), Gaps = 14/115 (12%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 Y A + T+YP Y +G SY Q + + Sbjct: 224 EFDLGIGYMQRRDYALAEETMRNFATKYPNDALTPDSQYWLGESYFQR--------QMYR 275 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV------EIGRYYLKRGE 205 + + +Y S A + + L KE EIGR Y K Sbjct: 276 DSAEAFLAVTSKYDKSAKAPDALLRLGQSLSALKEKEAACAALGEIGRKYPKASA 330 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 14/110 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 +R L + M +Y N +++++ G Y +R Y + Sbjct: 234 RRDYALAEETMRNFATKYPNDALTPDSQYWL--------------GESYFQRQMYRDSAE 279 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 F V + Y + A +A+ RL ++ AL + A + I +YP+ Sbjct: 280 AFLAVTSKYDKSAKAPDALLRLGQSLSALKEKEAACAALGEIGRKYPKAS 329 >gi|323304870|gb|EGA58628.1| Ppt1p [Saccharomyces cerevisiae FostersB] Length = 513 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 20/133 (15%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL--MSAFVQY 105 + D E + +F+KE++F KA E + D + +S+ AF + Sbjct: 4 PTAADRAKALERKNEGNVFVKEKHFLKAIEKYTEAIDLD------STQSIYFSNRAFAHF 57 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +Q A + +E I P++ Y+ +S ++ K + ++ + Sbjct: 58 KVDNFQSALNDCDEAIKLDPKNIK---AYHRRALSCMALLE--------FKKARKDLNVL 106 Query: 166 VERYTNSPYVKGA 178 ++ N P A Sbjct: 107 LKAKPNDPAATKA 119 >gi|295094812|emb|CBK83903.1| Tetratricopeptide repeat. [Coprococcus sp. ART55/1] Length = 272 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 80/233 (34%), Gaps = 24/233 (10%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARK-SLLMSAFVQYSAGKYQ 111 V + E+Y++ V + K ++ +A + F+ + + F+ + L A + +Y Sbjct: 42 VSQKDELYDQGVKYYKSGSYQEAIDSFDNALAENQLFSKKKDQNIKLYLADAYLKSAQYT 101 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 +AA+ E I NV L ++ A + Q L + + E Y Sbjct: 102 EAANTYNELIQDSFTGSNVKD---LKELATAL----SDFSQGNYGGALDVLLKQAETYPE 154 Query: 172 -SPYVKGARFYVTVGRNQLAAKEVEI-------------GRYYLKRGEYVAAIPRFQLVL 217 Y+ + E + G YYL G+ +AI L Sbjct: 155 LYMYIGTCYAVTDESDKMFESYEKYVQTFGFNSYVYAMYGSYYLNNGDMESAIAYITNGL 214 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + D + +E + + Y D+A E+ + YP + T + Sbjct: 215 DS-GDKIYRKELLMLEITYYEKNEDYDKAYEIAGQLVSEYPDYEKGQKEYTFL 266 >gi|254428325|ref|ZP_05042032.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881] gi|196194494|gb|EDX89453.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881] Length = 566 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 43/134 (32%), Gaps = 19/134 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK--YQQAASLG 117 + +A ++ N E Q + +P ++ L A + + + A Sbjct: 150 LVNQARGLDEQGNLQL-VEALAQLTDSYP-----DQAPLWYARALWLEHEKQPEPALDAT 203 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E + P ++ L + + L+++ ++V +Y + + Sbjct: 204 ERTLKLMPRHED---ALLLKAQLLYET--------GEPQKALRHLKKLVRKYPQARRPRI 252 Query: 178 ARFYVTVGRNQLAA 191 A + + QL Sbjct: 253 AYVRMLLATGQLEE 266 >gi|317154864|ref|YP_004122912.1| cell wall hydrolase/autolysin [Desulfovibrio aespoeensis Aspo-2] gi|316945115|gb|ADU64166.1| cell wall hydrolase/autolysin [Desulfovibrio aespoeensis Aspo-2] Length = 614 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 41/133 (30%), Gaps = 25/133 (18%) Query: 80 FNQCSRDF-------PFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYP 125 + + + F P A K+L V G +++A +++YP Sbjct: 61 WEKVEQRFSQCLRADPDGPNAPKALYYIGRVHEELGVQSGSGADFRRAIDYFGRVVSRYP 120 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D Y A+ +++ T+ ++RI+ Y S Sbjct: 121 RHGWADDCLYRRADINARRLKE-------TEAARLDLARILVEYPRS----DMYAKADAA 169 Query: 186 RNQLAAKEVEIGR 198 +L + + + Sbjct: 170 LRKLGGYDKAVAK 182 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 14/128 (10%) Query: 151 DQRATK------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 D R K + Q S+ + + P A +Y+ +L + + +R Sbjct: 51 DPRKAKYRANWEKVEQRFSQCLRADPDGPNAPKALYYIGRVHEELGVQSGSGADF--RR- 107 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VALALMDEAREVVSLIQERYPQGYWA 263 AI F V++ Y A++ + R + L + AR ++ I YP+ Sbjct: 108 ----AIDYFGRVVSRYPRHGWADDCLYRRADINARRLKETEAARLDLARILVEYPRSDMY 163 Query: 264 RYVETLVK 271 + ++ Sbjct: 164 AKADAALR 171 >gi|225011907|ref|ZP_03702345.1| TPR repeat-containing protein [Flavobacteria bacterium MS024-2A] gi|225004410|gb|EEG42382.1| TPR repeat-containing protein [Flavobacteria bacterium MS024-2A] Length = 1008 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 28/172 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y+ A ++ K ++ A ++F + F + R + L +++ +Y A Sbjct: 503 YDIAYIYFKLGEYAFALKFFKEFNAVNSSFNQS-YQRDTFLRMGDCEFALKQYWSAMEFY 561 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 I S+ Y Y G+SY + R++ ++ + ++ + Y P + Sbjct: 562 NTAIALN--SEQGAYAMYQKGISYGFVDRNLKK--------IETLLQLTQTYLKDPLLDD 611 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 A E+ Y + + AI + L+L+NY ++ + A Sbjct: 612 AL--------------FELASSYSRESNTIKAIETYDLLLSNYKNSPYTPRA 649 Score = 35.5 bits (81), Expect = 8.9, Method: Composition-based stats. Identities = 28/233 (12%), Positives = 77/233 (33%), Gaps = 46/233 (19%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D ++E A + +E N KA E ++ ++ + ++ L + Y+ +Y + Sbjct: 606 DPLLDDALFELASSYSRESNTIKAIETYDLLLSNYKNSPYTPRAGLNKGLILYNKERYIE 665 Query: 113 AASLGEEYITQYPESKNV------------------DYVYYLVGMSYAQMIRDVPYDQRA 154 A ++ E+ +Y + ++ D+ ++ A Sbjct: 666 AKTILEDIAIKYRRDPVAQQAVRTLREIAVDQAEVSAFAQWVKTQ-NLNTFSDIELEKTA 724 Query: 155 ------------TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 T + + +E Y + A FY+ Y + Sbjct: 725 FTSAEKQFLDGNTNTAEKLLKEYIETYPQGVFGNPAGFYLAEI--------------YFE 770 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + + A+P +Q ++ + + E+++ +++ E+ + + + Sbjct: 771 KELSIEALPFYQAIVNQ-QVSSYTEKSLVQIITLLKKEGRQAESITYLEKLDQ 822 >gi|254286662|ref|ZP_04961617.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|150423246|gb|EDN15192.1| conserved hypothetical protein [Vibrio cholerae AM-19226] Length = 525 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 14/133 (10%) Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63 +L A+C+F F+L + F +++ W S + D + E Y + Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361 Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117 A ++ + A Y+ + ++ + A AG+ Q+A L Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420 Query: 118 EEYITQYPESKNV 130 E+ + Q P ++ Sbjct: 421 EQVLKQEPNHQDA 433 >gi|283780558|ref|YP_003371313.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068] gi|283439011|gb|ADB17453.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068] Length = 548 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 54/142 (38%), Gaps = 21/142 (14%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 + L A Y Y+ AA+ E++++ Y ES + ++ Q+ Q Sbjct: 52 ERYQLQIAEKYYRDQDYKVAAAEYEKFLSLYEESVGAPHAQLRWSLAQVQL-----RKQN 106 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 + +++ + S A+FY+ GR Y + G A Sbjct: 107 TAIK--EGFQSVIDYWPESQQAIAAKFYM--------------GRTYKEIGRVAEAKKTL 150 Query: 214 QLVLANYSDAEHAEEAMARLVE 235 + ++ ++ + A +A+ +L++ Sbjct: 151 RALVKDHPAHQVAVQAIEQLID 172 Score = 42.8 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 41/109 (37%), Gaps = 14/109 (12%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 DQ K+ + + Y S A+ ++ + QL R + A Sbjct: 64 RDQ-DYKVAAAEYEKFLSLYEESVGAPHAQLRWSLAQVQL-------------RKQNTAI 109 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 FQ V+ + +++ A A + Y + + EA++ + + + +P Sbjct: 110 KEGFQSVIDYWPESQQAIAAKFYMGRTYKEIGRVAEAKKTLRALVKDHP 158 >gi|189465627|ref|ZP_03014412.1| hypothetical protein BACINT_01985 [Bacteroides intestinalis DSM 17393] gi|189437901|gb|EDV06886.1| hypothetical protein BACINT_01985 [Bacteroides intestinalis DSM 17393] Length = 279 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 12/122 (9%), Positives = 32/122 (26%), Gaps = 14/122 (11%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----------KAVLFL 68 + K F + + + S + + E + Sbjct: 2 MKKILFFTFVGLLMALTSSGQTTSDTLQQANDSVTIGSHTEFSAAVQENSVTKAEGDSAY 61 Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 + +++ A + + ++ A Y AG +A E + P + Sbjct: 62 VKNDYASAIQIYEALLKE---GEAAE-VYYNLGNSYYKAGDIAKAILNYERALLIQPGNA 117 Query: 129 NV 130 ++ Sbjct: 118 DI 119 >gi|311747868|ref|ZP_07721653.1| hypothetical protein ALPR1_16119 [Algoriphagus sp. PR1] gi|126575861|gb|EAZ80171.1| hypothetical protein ALPR1_16119 [Algoriphagus sp. PR1] Length = 550 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 10/93 (10%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+KA FLK +N+ +A F + + +A + Y A + +QA + Sbjct: 26 YQKAQDFLKSKNYWEAMPLFREFLDAEKYGNLANYAAFHLGEAAYRANQPEQAIEALK-- 83 Query: 121 ITQYPESKNV----DYVYYLVGMSYAQMIRDVP 149 P + V D YL+ ++Y Q ++V Sbjct: 84 ----PIASKVWTKSDESNYLLALAYFQNQQNVE 112 >gi|32471678|ref|NP_864671.1| DNA-directed RNA polymerase alpha chain [Rhodopirellula baltica SH 1] gi|32397049|emb|CAD72353.1| probable DNA-directed RNA polymerase alpha chain [Rhodopirellula baltica SH 1] gi|327539093|gb|EGF25725.1| RNA polymerase alpha subunit domain protein [Rhodopirellula baltica WH47] Length = 500 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 46/131 (35%), Gaps = 6/131 (4%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 + + G ++ TD + ++ A+ + N +A + + ++ FP Sbjct: 220 AATAAQIGGRMEEAINLYQRAVSTDENHAGALFGLALENDRLGNDDEALRLYERAAKAFP 279 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV-GMSYAQMIRD 147 +L+ + G+Y +A + + +P+ Y+ + M+ D Sbjct: 280 TG---IGALINLGVMYEDNGQYDKAQLCYKRILDCHPDHPRTQ--LYMKDASATGNMLYD 334 Query: 148 VPYDQRATKLM 158 +R +L Sbjct: 335 EEAQRRNDRLA 345 >gi|261377462|ref|ZP_05982035.1| putative periplasmic protein [Neisseria cinerea ATCC 14685] gi|269146190|gb|EEZ72608.1| putative periplasmic protein [Neisseria cinerea ATCC 14685] Length = 238 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 42/125 (33%), Gaps = 11/125 (8%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 ++ +Y +A+ + FS A +A++S+ + + G + Sbjct: 117 PTEQSLYNQALKHYQNGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGNCESVI 175 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 +G Y ++ + + +G + +D+ +++ Y SP Sbjct: 176 EIGRRYANRFKGTPAAPEAIFKIGECQYRLQQKDIAR---------ATWRGLIQAYPGSP 226 Query: 174 YVKGA 178 K A Sbjct: 227 AAKRA 231 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 26/73 (35%), Gaps = 16/73 (21%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +EIGR Y RF+ A EA+ ++ E L D AR + Sbjct: 175 IEIGRRY---------ANRFK-------GTPAAPEAIFKIGECQYRLQQKDIARATWRGL 218 Query: 254 QERYPQGYWARYV 266 + YP A+ Sbjct: 219 IQAYPGSPAAKRA 231 >gi|118357157|ref|XP_001011828.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89293595|gb|EAR91583.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 494 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 56/186 (30%), Gaps = 34/186 (18%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 L L+ N K+ +F + + P L F Y G Y +A S ++ Sbjct: 317 GQLHLRNGNIEKSKIFFEKILKIRPNQSY---ILNNLGFAYYLEGDYSKAISYYQQSQEI 373 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 P VY + + +Q + +Q + + N Sbjct: 374 NPN------VY-----DTFNNLGLIYQNQGFAEQAIQQYVKAINILPN----------FA 412 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 N L G Y + GE+ AI + +++ + Y + + Sbjct: 413 EALNNL-------GSIYFQIGEFGTAIYYYMEAQEADPQFLEPYKSLGYI---YKKIGQV 462 Query: 244 DEAREV 249 +EA + Sbjct: 463 EEANNI 468 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 59/172 (34%), Gaps = 15/172 (8%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---IRDVPYDQRATKLMLQY 161 Y GK+Q A E + NV Y+Y +G Y Q + + Q+A + Sbjct: 11 YKQGKFQDALQTFNELLQINTFKSNVPYIYNTIGSIYEQQNMKDQAIKQYQKALENEPSD 70 Query: 162 MSRIVE----RYTNSPYVKGARFYVTVGRNQLAAKEVE----IGRYYLKRGEYVAAIPRF 213 ++ + + VK A + + L ++Y + AI + Sbjct: 71 YEALINLGNLYFFDKNMVKEANECIKKALD-LNPNCFFTWYKAAKFYDNSNQNQEAIYNY 129 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 + L+ + E + L + Y + EA + + + + Y+ + Sbjct: 130 KKALSIFPRDS---EILYSLAQIYHKIGNNQEAIKFEEKVIKNNQKEYYFHF 178 >gi|126642009|ref|YP_001084993.1| putative signal peptide [Acinetobacter baumannii ATCC 17978] Length = 239 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 17/120 (14%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209 Q K + M ++ + NS Y A F++ ++L Y A Sbjct: 134 QGGAKKAIAPMQNFIKNHPNSIYTGNAYFWL--------------AEFHLATDPVNYNEA 179 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + +V Y ++ A A+ +L A A + + + +YP+ A++ Sbjct: 180 KKNYNVVANQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKNKLLSQYPKSEEAKFFNK 239 Score = 42.4 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 9/122 (7%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAA 114 ++ Y A+ K+ KA ++ P + + A + Y +A Sbjct: 121 EKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSIYTGNAYFWLAEFHLATDPVNYNEAK 180 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 QYP S Y + + +DV + T QY ++++ +Y S Sbjct: 181 KNYNVVANQYPNSSKAPRALYQL----YSIAKDVD---KNTVSANQYKNKLLSQYPKSEE 233 Query: 175 VK 176 K Sbjct: 234 AK 235 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 8/79 (10%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163 Y G ++A + + +I +P S G +Y + + D + + Sbjct: 132 YKQGGAKKAIAPMQNFIKNHPNSIYT-------GNAYFWLAEFHLATDPVNYNEAKKNYN 184 Query: 164 RIVERYTNSPYVKGARFYV 182 + +Y NS A + + Sbjct: 185 VVANQYPNSSKAPRALYQL 203 >gi|6321562|ref|NP_011639.1| Ppt1p [Saccharomyces cerevisiae S288c] gi|1709746|sp|P53043|PPT1_YEAST RecName: Full=Serine/threonine-protein phosphatase T; Short=PPT gi|642346|emb|CAA58158.1| serine/threonine phosphatase [Saccharomyces cerevisiae] gi|1323201|emb|CAA97134.1| PPT1 [Saccharomyces cerevisiae] gi|45270080|gb|AAS56421.1| YGR123C [Saccharomyces cerevisiae] gi|285812316|tpg|DAA08216.1| TPA: Ppt1p [Saccharomyces cerevisiae S288c] Length = 513 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 20/133 (15%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL--MSAFVQY 105 + D E + +F+KE++F KA E + D + +S+ AF + Sbjct: 4 PTAADRAKALERKNEGNVFVKEKHFLKAIEKYTEAIDLD------STQSIYFSNRAFAHF 57 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +Q A + +E I P++ Y+ +S ++ K + ++ + Sbjct: 58 KVDNFQSALNDCDEAIKLDPKNIK---AYHRRALSCMALLE--------FKKARKDLNVL 106 Query: 166 VERYTNSPYVKGA 178 ++ N P A Sbjct: 107 LKAKPNDPAATKA 119 >gi|186686296|ref|YP_001869492.1| hypothetical protein Npun_R6265 [Nostoc punctiforme PCC 73102] gi|186468748|gb|ACC84549.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC 73102] Length = 226 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 20/125 (16%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP---FAGVARKSLLMSAFVQYS 106 S T + ++ ++A + + + A E + + FP F V + Sbjct: 59 SDTGPSERSQMLQQANALFNQGDLTGAEENLRKLIKKFPDDAFGHFQ------LGNVLFR 112 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 K ++A S +E I +SK Y +GM YA R + + + Sbjct: 113 QKKPEEAISAYQEAIRL--QSKYA-LAYNAIGMVYASQSR--------WDEAMTEYKKAL 161 Query: 167 ERYTN 171 E N Sbjct: 162 EINPN 166 >gi|291278873|ref|YP_003495708.1| hypothetical protein DEFDS_0458 [Deferribacter desulfuricans SSM1] gi|290753575|dbj|BAI79952.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 530 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 80/216 (37%), Gaps = 38/216 (17%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 +RD+YL + Y +Y A ++ +++ A +Y ++ + LL Sbjct: 78 DEARDLYLKFLEKEDYPGILYNLANIYKTYYKDYDSAIKYLSKLIKI----EKREGYLLE 133 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + G Y +A + +E I P S YY G Y ++ L Sbjct: 134 LMKLYELKGDYAKAIGVLDELIGLNPSSAY----YYQRGTLYLKL-----------GLEK 178 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 + + + + Y N Y LA ++ YYLK+G+ A+ V+ Sbjct: 179 KGLKDLEQAYKNDKYP-------------LALYKL--ADYYLKKGDKEKAVKYLSSVVNK 223 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + + + +L Y+ L D+A E+ +++ Sbjct: 224 HPEQASLK---FQLGRLYMDLKEYDKAVEIFEELEK 256 >gi|153214418|ref|ZP_01949389.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|124115367|gb|EAY34187.1| conserved hypothetical protein [Vibrio cholerae 1587] Length = 644 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 14/133 (10%) Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63 +L A+C+F F+L + F +++ W S + D + E Y + Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361 Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117 A ++ + A Y+ + ++ + A AG+ Q+A L Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420 Query: 118 EEYITQYPESKNV 130 E+ + Q P ++ Sbjct: 421 EQVLKQEPNHQDA 433 >gi|91201683|emb|CAJ74743.1| unknown protein [Candidatus Kuenenia stuttgartiensis] Length = 237 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 79/220 (35%), Gaps = 46/220 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +K + F +++ + +A + F + +++ A Y+ G ++ + + Sbjct: 29 KKGLSFFEQKKYDEAIDAFKKALEINKNHYDAHYG------LGVAYYTKGMIDESLTELK 82 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK-- 176 I PE V Y + +Y + T +Q ++ +++ VK Sbjct: 83 RAIELNPEEPK---VRYNIAFAYMAK--------QMTMEAIQEYKTAIDLFSSKKDVKKE 131 Query: 177 -GARFYVTVGRNQLAAK---------------EVEIGRY-----YLKRGEYVAAIPRFQL 215 A Y++V + + E+E G Y Y K Y AI + Sbjct: 132 AEAHLYLSVAYSLMENHDEALLACKKAIALNPELEDGHYFLGVCYYKNNMYDEAIAALKK 191 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + AE+A + L Y L +++EA ++Q+ Sbjct: 192 TIMLNPK---AEKAHSVLHVIYDKLGMVEEATSERFILQQ 228 >gi|329893687|ref|ZP_08269821.1| TPR repeat containing exported protein [gamma proteobacterium IMCC3088] gi|328923614|gb|EGG30926.1| TPR repeat containing exported protein [gamma proteobacterium IMCC3088] Length = 295 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 45/129 (34%), Gaps = 13/129 (10%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 R + YD++ + + + Y + Y A +++ L +E L Sbjct: 176 YLAARQLVYDRK-FDDAVASFNEFLLDYPDGAYAPNAHYWLGELYLVLEQPNLE-----L 229 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 R FQL+L Y +A +L Y A + A+ ++ + YP+ Sbjct: 230 SRQA-------FQLLLDLYPQHNKVPDASFKLATVYFAKGNAERAKTMLEAVIATYPKQP 282 Query: 262 WARYVETLV 270 A + + Sbjct: 283 VAELAKKFL 291 Score = 45.1 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 37/132 (28%), Gaps = 10/132 (7%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ--YSAG 108 + Y A + ++ F A FN+ D+P A + + Sbjct: 166 PPADAKEEPAYLAARQLVYDRKFDDAVASFNEFLLDYPDGAYAPNAHYWLGELYLVLEQP 225 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + + + + YP+ V + + Y + + ++ Sbjct: 226 NLELSRQAFQLLLDLYPQHNKVPDASFKLATVYFAK--------GNAERAKTMLEAVIAT 277 Query: 169 YTNSPYVKGARF 180 Y P + A+ Sbjct: 278 YPKQPVAELAKK 289 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 20/131 (15%) Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 K+ A + E++ YP+ +Y +G Y + +Q +L Q ++ Sbjct: 185 DRKFDDAVASFNEFLLDYPDGAYAPNAHYWLGELY------LVLEQPNLELSRQAFQLLL 238 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + Y V A F + Y +G A + V+A Y A Sbjct: 239 DLYPQHNKVPDASFKL--------------ATVYFAKGNAERAKTMLEAVIATYPKQPVA 284 Query: 227 EEAMARLVEAY 237 E A L + Y Sbjct: 285 ELAKKFLADKY 295 >gi|255746017|ref|ZP_05419964.1| TPR domain protein in aerotolerance operon [Vibrio cholera CIRS 101] gi|262162144|ref|ZP_06031159.1| TPR domain protein in aerotolerance operon [Vibrio cholerae INDRE 91/1] gi|255735771|gb|EET91169.1| TPR domain protein in aerotolerance operon [Vibrio cholera CIRS 101] gi|262028219|gb|EEY46877.1| TPR domain protein in aerotolerance operon [Vibrio cholerae INDRE 91/1] Length = 632 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 14/133 (10%) Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63 +L A+C+F F+L + F +++ W S + D + E Y + Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361 Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117 A ++ + A Y+ + ++ + A AG+ Q+A L Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420 Query: 118 EEYITQYPESKNV 130 E + Q P ++ Sbjct: 421 EHVLKQEPNHQDA 433 >gi|229605141|ref|YP_002875845.1| TPR domain protein in aerotolerance operon [Vibrio cholerae MJ-1236] gi|229371627|gb|ACQ62049.1| TPR domain protein in aerotolerance operon [Vibrio cholerae MJ-1236] Length = 624 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 14/133 (10%) Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63 +L A+C+F F+L + F +++ W S + D + E Y + Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361 Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117 A ++ + A Y+ + ++ + A AG+ Q+A L Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420 Query: 118 EEYITQYPESKNV 130 E + Q P ++ Sbjct: 421 EHVLKQEPNHQDA 433 >gi|229517330|ref|ZP_04406775.1| TPR domain protein in aerotolerance operon [Vibrio cholerae RC9] gi|229345366|gb|EEO10339.1| TPR domain protein in aerotolerance operon [Vibrio cholerae RC9] Length = 652 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 14/133 (10%) Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63 +L A+C+F F+L + F +++ W S + D + E Y + Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361 Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117 A ++ + A Y+ + ++ + A AG+ Q+A L Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420 Query: 118 EEYITQYPESKNV 130 E + Q P ++ Sbjct: 421 EHVLKQEPNHQDA 433 >gi|223937543|ref|ZP_03629446.1| Tetratricopeptide domain protein [bacterium Ellin514] gi|223893706|gb|EEF60164.1| Tetratricopeptide domain protein [bacterium Ellin514] Length = 900 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 52/159 (32%), Gaps = 24/159 (15%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N + A + P + ++ + L A G +Q A + + I S + Sbjct: 527 NPAGARDLLQMFIEKSPTSPLSSEVRLAIAHTYEKEGNWQAAITNYDRLIVDSTNSAVLP 586 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 V + M+ + ++ V +++ + A+++ Sbjct: 587 RVEFSRAMANFRA--------GYETNAYSILTNFVVKFSTNQLAAKAKYW---------- 628 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 IG Y+ ++ ++ A ++ V N+ E + Sbjct: 629 ----IGDYFWRQEDFPRAERSYKEVYQNWP--AATNEGL 661 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 32/242 (13%), Positives = 76/242 (31%), Gaps = 43/242 (17%) Query: 71 QNFSKAYEYFNQCSR-DFPFAGVA--RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 + A E + + A R+++ + K A + +++++PE Sbjct: 278 GRLADAVEVYENFEKKLSAETPKALRRQAIYKIVDLNLKQNKLDIATQKLDSFLSKFPED 337 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRAT----------KLMLQYMSRIVERYTNSPYVKG 177 + D +G + L +++ +TNS +V Sbjct: 338 RTADVALLTLGELQLRQATTTGLTPATAAVTLPGTNLLSLAKANFQKLINSFTNSDFVGA 397 Query: 178 ARFYVTVG-----------------RNQLAAKE-VEIGRY------YLKRGEYVAAIPRF 213 A+ + +L E + R+ + +R + A + Sbjct: 398 AQLNLGWCLWLENKPAESRTAFSNALQRLPQSESQAVARFKLADIQFTERDFHGALTN-Y 456 Query: 214 QLVLANYSDAEHA-----EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 V+ Y + E ++ ++ A +A + +A + ++ I + YP + Sbjct: 457 IPVVEEYKNFPLVRSNLFERSLYQITRAALAETNITQASQAMAKILDLYPNTLLSDSSAL 516 Query: 269 LV 270 LV Sbjct: 517 LV 518 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 73/229 (31%), Gaps = 55/229 (24%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG------ 108 + +E A F K N+ KA E ++ +P + ++L+ +Y+ G Sbjct: 32 TPESHAFEVAADFFKSHNWEKAEEKLADFAKKYPTSEFFADAVLLQGESRYALGRDSGVV 91 Query: 109 -----KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + A L ++Y Y ++ + K S Sbjct: 92 ELLSTEMPHAGKLADQY-------------LYWTAVASYRS--------ANYKNAADSFS 130 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP-------RFQLV 216 RIV YTNS A + L K G + AI FQ + Sbjct: 131 RIVTVYTNSAKRAEA---IFSQSQTLG-----------KMGAWPEAIKELRQPDGAFQQL 176 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER--YPQGYWA 263 L + E A + + L EA + E + +I ++ P+ W Sbjct: 177 LKSNPTNEFAIKGVLLLAEADLIQKDYQAVSEDLRIISQQKLTPEFKWR 225 >gi|153822653|ref|ZP_01975320.1| conserved hypothetical protein [Vibrio cholerae B33] gi|229510538|ref|ZP_04400018.1| TPR domain protein in aerotolerance operon [Vibrio cholerae B33] gi|126519810|gb|EAZ77033.1| conserved hypothetical protein [Vibrio cholerae B33] gi|229352983|gb|EEO17923.1| TPR domain protein in aerotolerance operon [Vibrio cholerae B33] Length = 622 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 14/133 (10%) Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63 +L A+C+F F+L + F +++ W S + D + E Y + Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361 Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117 A ++ + A Y+ + ++ + A AG+ Q+A L Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420 Query: 118 EEYITQYPESKNV 130 E + Q P ++ Sbjct: 421 EHVLKQEPNHQDA 433 >gi|254850437|ref|ZP_05239787.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|254846142|gb|EET24556.1| conserved hypothetical protein [Vibrio cholerae MO10] Length = 644 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 14/133 (10%) Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63 +L A+C+F F+L + F +++ W S + D + E Y + Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361 Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117 A ++ + A Y+ + ++ + A AG+ Q+A L Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420 Query: 118 EEYITQYPESKNV 130 E + Q P ++ Sbjct: 421 EHVLKQEPNHQDA 433 >gi|15600941|ref|NP_232571.1| hypothetical protein VCA0171 [Vibrio cholerae O1 biovar eltor str. N16961] gi|9657561|gb|AAF96084.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] Length = 646 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 14/133 (10%) Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63 +L A+C+F F+L + F +++ W S + D + E Y + Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361 Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117 A ++ + A Y+ + ++ + A AG+ Q+A L Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420 Query: 118 EEYITQYPESKNV 130 E + Q P ++ Sbjct: 421 EHVLKQEPNHQDA 433 >gi|116622919|ref|YP_825075.1| sulfatase [Candidatus Solibacter usitatus Ellin6076] gi|116226081|gb|ABJ84790.1| sulfatase [Candidatus Solibacter usitatus Ellin6076] Length = 550 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 37/113 (32%), Gaps = 8/113 (7%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 + + Q++ D + +YE A + L + +A + P Sbjct: 404 LLGSLGYIAPGPQTAASGSRPDPKDRMAEFRLYEDAQVLLYRRRLPEAIAALRKLVTQHP 463 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV-YYLVGMS 140 +AR+ +Y +A + + P DYV Y +G++ Sbjct: 464 RNTLARR---DLGGAYLEQKQYARAREELAQVLLAAPN----DYVTLYQLGLA 509 >gi|56552553|ref|YP_163392.1| hypothetical protein ZMO1657 [Zymomonas mobilis subsp. mobilis ZM4] gi|56544127|gb|AAV90281.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 356 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 38/89 (42%), Gaps = 7/89 (7%) Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 P + A + L + + ++ +Y +A ++ + +I++YP Y L+G +Y D Sbjct: 223 PNSDPAEQVYL-AGYKLWNDKRYPEAETVLKSFISKYPSHSRASYARNLLGRAYL----D 277 Query: 148 VPYDQRATKLMLQYMSRIVE--RYTNSPY 174 +A + I + R +S Y Sbjct: 278 SGEPAQAAETFYSNYQSIPQGARAPDSLY 306 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 39/123 (31%), Gaps = 12/123 (9%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + +VY ++ + +A +P A + + +G+ Sbjct: 223 PNSDPAEQVYLAGYKLWNDKRYPEAETVLKSFISKYPSHSRASYARNLLGRAYLDSGEPA 282 Query: 112 QAASLGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 QA E + + Y P+ Y +G S + P D + + +++ Sbjct: 283 QA---AETFYSNYQSIPQGARAPDSLYFLGQSLMALKPARPKD------ACKVYAELLDV 333 Query: 169 YTN 171 Y N Sbjct: 334 YGN 336 >gi|220932028|ref|YP_002508936.1| TPR repeat-containing protein [Halothermothrix orenii H 168] gi|219993338|gb|ACL69941.1| TPR repeat-containing protein [Halothermothrix orenii H 168] Length = 394 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 72/205 (35%), Gaps = 39/205 (19%) Query: 45 DVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAF 102 + LD + + +Y A L++ ++++ KA + + + P F ++ K Sbjct: 198 EKALDMTESTQNRISIYSNLAELYMNDKDYEKAIKVLEESKKINPDFVAISTK----LGE 253 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 Y +G Y+ A E+ ++ + Y YY +G + + + Y Sbjct: 254 AYYLSGNYELAREEFEKVVSIN----DKSYKAYYYLGKIHEINHNE--------DKAIYY 301 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + ++ Y A Y+ + G Y+++ + AI + + Sbjct: 302 YKQALKYNP--EY---ASAYIAL------------GDIYIRQDKPYLAISHYSTAIEKNP 344 Query: 222 DAEHAEEAMARLVEAYVALALMDEA 246 + ++ L Y L + D A Sbjct: 345 N---YPDSHFHLAVTYYILEMEDAA 366 >gi|301095908|ref|XP_002897053.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262108482|gb|EEY66534.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 611 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 60/182 (32%), Gaps = 20/182 (10%) Query: 5 LGRAICIFEAWAYQLYKFALTIFFSIAVC----FLVGWERQSSRDVYLDSVTDVRY---Q 57 L RA C+F ++ + A+C FL+ +RQ S LD + + Sbjct: 110 LSRACCLFYLQNFEDAEHTALSSSRSALCNRLLFLLAHKRQHSEQTLLDRYQQLSRDSVE 169 Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSAGKYQQAASL 116 ++ A + NF +A E + + + +L + A + G A L Sbjct: 170 DQL-AIAAASFTQNNFQEAAEIYKRLLASSKGSQEGGSALHVYLALCYFRLGYDDVALEL 228 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 Y+ + + + ++ + + V+R+ N P + Sbjct: 229 LAVYLV---GHPDSFFATNIKASCNYRLFN--------AREAKLILDDYVKRFPNHPSAQ 277 Query: 177 GA 178 A Sbjct: 278 EA 279 >gi|254225238|ref|ZP_04918851.1| conserved hypothetical protein [Vibrio cholerae V51] gi|125622337|gb|EAZ50658.1| conserved hypothetical protein [Vibrio cholerae V51] Length = 619 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 14/133 (10%) Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63 +L A+C+F F+L + F +++ W S + D + E Y + Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361 Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117 A + + A Y+ + ++ + A AG+ Q+A L Sbjct: 362 AAEAFRNPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420 Query: 118 EEYITQYPESKNV 130 E+ + Q P ++ Sbjct: 421 EQVLKQEPNHQDA 433 >gi|241762205|ref|ZP_04760287.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373252|gb|EER62871.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 356 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 38/89 (42%), Gaps = 7/89 (7%) Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 P + A + L + + ++ +Y +A ++ + +I++YP Y L+G +Y D Sbjct: 223 PNSDPAEQVYL-AGYKLWNDKRYPEAETVLKSFISKYPSHSRASYARNLLGRAYL----D 277 Query: 148 VPYDQRATKLMLQYMSRIVE--RYTNSPY 174 +A + I + R +S Y Sbjct: 278 SGEPAQAAETFYSNYQSIPQGARAPDSLY 306 Score = 40.1 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 39/123 (31%), Gaps = 12/123 (9%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + +VY ++ + +A +P A + + +G+ Sbjct: 223 PNSDPAEQVYLAGYKLWNDKRYPEAETVLKSFISKYPSHSRASYARNLLGRAYLDSGEPA 282 Query: 112 QAASLGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 QA E + + Y P+ Y +G S + P D + + +++ Sbjct: 283 QA---AETFYSNYQSIPQGARAPDSLYFLGQSLMALKPARPKD------ACKVYAELLDV 333 Query: 169 YTN 171 Y N Sbjct: 334 YGN 336 >gi|163814118|ref|ZP_02205510.1| hypothetical protein COPEUT_00271 [Coprococcus eutactus ATCC 27759] gi|158450567|gb|EDP27562.1| hypothetical protein COPEUT_00271 [Coprococcus eutactus ATCC 27759] Length = 245 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 77/234 (32%), Gaps = 48/234 (20%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARK-SLLMSAFVQYSAGKYQ 111 + + E Y+K V + + ++ +A F + + + F+ + L A + +Y Sbjct: 14 ISQKDEYYDKGVTYYESGSYQEAITSFKDALNENQLFSEKKDQNIKLYMADAYLKSAQYA 73 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS-------- 163 +AA+ +E ++ + D + L S Sbjct: 74 EAAATYKE-------------------LTDSSFSGSNVNDLKDLASALDDFSNGNYGGAL 114 Query: 164 ----RIVERYTN-SPYVKGARFYVTVGRNQLAAKEVEI-------------GRYYLKRGE 205 + + Y Y+ N A+ E + G YYL G+ Sbjct: 115 DVLLKEADTYPELYMYIGTCYAVTDDSENMFASYEKYVQTFGFNSYVYAMYGSYYLSNGD 174 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +A+ + L D + +E M V Y + D+A E+ S + E YP Sbjct: 175 MESALAYIKNGLEC-DDTVYRKELMLLQVAYYEKNSDFDQAYELASQLVETYPD 227 >gi|13473328|ref|NP_104895.1| hypothetical protein mll3886 [Mesorhizobium loti MAFF303099] gi|14024077|dbj|BAB50681.1| mll3886 [Mesorhizobium loti MAFF303099] Length = 370 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 45/138 (32%), Gaps = 22/138 (15%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 S + ++ E+Y + F+ ++ A + F FP R + + Sbjct: 230 GKSNGTIVAALPSTNDPEELYRNSYQFILSGDYGTAEQGFRDHISRFP-----RDAK--A 282 Query: 101 AFVQYSAGKYQQA----ASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 A Y G+ E ++ YP++K + +G+S V Q Sbjct: 283 ADAHYWLGESLLGQQKYRDAAEVFLAASKDYPKAKKAPDMLLKLGVSL------VGLKQH 336 Query: 154 ATKLMLQYMSRIVERYTN 171 S + +RY + Sbjct: 337 DV--ACATFSEVGKRYPD 352 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 38/132 (28%), Gaps = 29/132 (21%) Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 +G Y A ++I+++P +Y +G S Q+ + + Sbjct: 259 SGDYGTAEQGFRDHISRFPRDAKAADAHYWLGESL--------LGQQKYRDAAEVFLAAS 310 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + Y + + V L +V + V Y D A Sbjct: 311 KDYPKAKKAPDMLLKLGVSLVGLKQHDVACATF--------------SEVGKRYPDISSA 356 Query: 227 -------EEAMA 231 E+A+A Sbjct: 357 LKERVKQEKALA 368 >gi|17230575|ref|NP_487123.1| hypothetical protein all3083 [Nostoc sp. PCC 7120] gi|17132177|dbj|BAB74782.1| all3083 [Nostoc sp. PCC 7120] Length = 422 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 6/84 (7%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 E Y + + K+++++ A E F++ + P+ A + L Y +G A S Sbjct: 2 NNEFYNQGLEKAKQKDYAGAIEEFSRALKLAPY--FAE-AYLQRGLAYYDSGAILLAVSD 58 Query: 117 GEEYITQYPESKNVDYVYYLVGMS 140 E I PES YY ++ Sbjct: 59 YTEVIKINPESVE---AYYCRALA 79 >gi|260891961|ref|YP_003238058.1| Tetratricopeptide repeat protein [Ammonifex degensii KC4] gi|260864102|gb|ACX51208.1| Tetratricopeptide repeat protein [Ammonifex degensii KC4] Length = 192 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 44/126 (34%), Gaps = 13/126 (10%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++ E +E ++A + + + +P + L A + + KY A E Sbjct: 76 KLLELGAKAREEGKLAEATRTYEEVLKLYPDN---TNARLSLAEIYLAEEKYDAAYQQVE 132 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + P + + G+ +D P ++ + + ++ ++P A Sbjct: 133 AILQKNPNHQL---ALFYRGLILGYGKKDYP-------AAVKDLEKFLKLAPDAPEASQA 182 Query: 179 RFYVTV 184 R + Sbjct: 183 RILIEE 188 >gi|209527435|ref|ZP_03275940.1| TPR repeat-containing protein [Arthrospira maxima CS-328] gi|209492108|gb|EDZ92458.1| TPR repeat-containing protein [Arthrospira maxima CS-328] Length = 520 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 78/213 (36%), Gaps = 43/213 (20%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARK-SLLMSAFVQYSAGKYQQAASLG 117 Y +A + +A +++ ++ P F + +LLMS G++++A Sbjct: 309 YGRANALSSLSQYDEAIASYDRATQLQPNFHPAWRDRGALLMS------LGRHEEALQAF 362 Query: 118 EEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + + P+ DY ++YL G + D P + +R++ + Sbjct: 363 DRLLQIQPD----DYGIWYLRGNILMNHLDDYP-------EAARSYARVINIKPDFTPAF 411 Query: 177 GARFYVTVGRNQLAAKEVEIG-------RYYLKRGEYV------AAIPRFQLVLANYS-- 221 A+ +L I + +R +V AI R+ L Y+ Sbjct: 412 TAKAQALF---RLGDYGEAIAWLDESLHQNSHQREAWVLRGQIFMAIQRYAQALNAYNRA 468 Query: 222 ---DAEHAEEAMARLVEAYVALALMDEAREVVS 251 D+ H++ + + + AY+ L EA++ Sbjct: 469 VNLDSNHSQSWLGKAI-AYLRLNRDQEAKDAAQ 500 >gi|296132539|ref|YP_003639786.1| TPR repeat-containing protein [Thermincola sp. JR] gi|296031117|gb|ADG81885.1| TPR repeat-containing protein [Thermincola potens JR] Length = 217 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 59/176 (33%), Gaps = 31/176 (17%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 +L+ + Y G YQQA EE + + ++ + +SY ++ Sbjct: 67 ALVELGWRYYRKGDYQQAVKNLEEAVRINDSNPA---AHFNLALSYKEI--------GLL 115 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + + +++++ + +G+ Y ++ Y AI + Sbjct: 116 EKAEEEFNKVLQISPDHKLAP-----------------FYMGKMYFEQNRYDDAI---KQ 155 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 ++ + +A L +AY A +EA E P A+ ++ Sbjct: 156 LVKATELDPASADASYLLGQAYQAKGYNEEALAAYERALELVPGHSEAKEAYYKLQ 211 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 8/72 (11%), Positives = 24/72 (33%), Gaps = 3/72 (4%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ ++ + A + + + P + + + + G ++A + E + Sbjct: 140 GKMYFEQNRYDDAIKQLVKATELDPASA---DASYLLGQAYQAKGYNEEALAAYERALEL 196 Query: 124 YPESKNVDYVYY 135 P YY Sbjct: 197 VPGHSEAKEAYY 208 >gi|154707419|ref|YP_001424860.1| tetratricopeptide repeat family protein [Coxiella burnetii Dugway 5J108-111] gi|154356705|gb|ABS78167.1| tetratricopeptide repeat family protein [Coxiella burnetii Dugway 5J108-111] Length = 561 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 49/182 (26%), Gaps = 49/182 (26%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A +++ +FSKA Y+ + P + ++Q+A + Sbjct: 179 AHVYMYLGDFSKAITYYEKRLALEPENA---DAQYDCGLAHLKDNQFQKAIDHFTNALLL 235 Query: 124 YPESKNVDY----VYYLVG------MSYAQMIRDVPYD------------QRATKLMLQY 161 PE + Y Y G + Y + + P Q + + Y Sbjct: 236 NPEHPDCHYSLATAYLQRGDHKEALLHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDY 295 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + + N + I YLK I + + + +Y Sbjct: 296 FKQALTLDPNYREA-----------------HLNIAAVYLK-------INQIKQAIEHYE 331 Query: 222 DA 223 Sbjct: 332 ST 333 >gi|29839839|ref|NP_828945.1| TPR domain-containing protein [Chlamydophila caviae GPIC] gi|29834186|gb|AAP04823.1| TPR domain protein [Chlamydophila caviae GPIC] Length = 318 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 81/238 (34%), Gaps = 39/238 (16%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S + + + +L++Q++ KA F + FP + +++ ++ Sbjct: 29 SGKLSPQKFVPKYSPEQYLSEGKNYLEQQSYRKALLCFGMITHHFPKDPLYTEAVYLTGV 88 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDY------VYYLVGMSYAQ-------MIRDVP 149 + G+ A Y+ + DY + Y + S+AQ ++ P Sbjct: 89 CYFKNGQPDLAEKAFAAYMQL----PDADYSEELFLMKYSIAQSFAQGKRKRLFLLEGFP 144 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 A L+ I+ + + K + L + I ++ A Sbjct: 145 KLVNADADALRIYDEILTAFPD----KDLGAQALYLKGDL----LVI------TKDFSEA 190 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD--------EAREVVSLIQERYPQ 259 I F+ + +S + +A RL E Y+ A + A+ I++++P Sbjct: 191 IKIFKKLTLQFSAHALSPKAFVRLSEIYLMQAQKEPHNVQYLNLAKINEEAIKKQHPN 248 Score = 43.2 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 56/152 (36%) Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 A +++ FP + ++L + + + +A + ++ Q+ + Sbjct: 152 DALRIYDEILTAFPDKDLGAQALYLKGDLLVITKDFSEAIKIFKKLTLQFSAHALSPKAF 211 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 + Y + P++ + L I +++ N P + V + A+ Sbjct: 212 VRLSEIYLMQAQKEPHNVQYLNLAKINEEAIKKQHPNHPLTEVVSANVRSMHERYASGLY 271 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 GR+Y K+ ++ AA + + NY ++ Sbjct: 272 ATGRFYEKKKKHHAASIYYTAAIDNYPESSLV 303 >gi|325298820|ref|YP_004258737.1| hypothetical protein Bacsa_1701 [Bacteroides salanitronis DSM 18170] gi|324318373|gb|ADY36264.1| hypothetical protein Bacsa_1701 [Bacteroides salanitronis DSM 18170] Length = 724 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 63/200 (31%), Gaps = 47/200 (23%) Query: 44 RDVYLDSVTDVRYQREVYEK-----AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + + D+R + + Y + A L ++ E +P ++ Sbjct: 533 SEWEHEDFIDLRTEEDYYNECKEIYAKKELSNHAYNNYIEK-------YPEGKYLKEVQS 585 Query: 99 ---MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + Y KY++ S ++YI +YP +YL S + D+ + Q Sbjct: 586 FKDTLKYESYLYEKYKETISSCKDYIKRYPNG------WYLS--SIKNRLDDLIFKQ--- 634 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + + +Y N V A + ++ R + Sbjct: 635 YKSAHNLEEYIVQYPNGRNVSKADDLLFE------QYKLT---------------NRLKD 673 Query: 216 VLANYSDAEHAEEAMARLVE 235 LA++ +A EA L + Sbjct: 674 YLAHFPKGRNAHEAENLLKK 693 >gi|110833382|ref|YP_692241.1| TPR domain-containing protein [Alcanivorax borkumensis SK2] gi|110646493|emb|CAL15969.1| TPR domain protein [Alcanivorax borkumensis SK2] Length = 532 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 49/141 (34%), Gaps = 21/141 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK--YQQAASLG 117 + +A + N E Q + +P ++ L A + + Q A Sbjct: 116 LVNQARGLGAQGNLQL-VEALAQLTHRYP-----DQAPLWYARALWLEHEEQPQPALEAT 169 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E + P ++ L + DQ K L+++ ++V +Y + + Sbjct: 170 ERTLKLMPRHED---ALLLKAQLLYE-----TGDQ---KKALRHLKKLVRKYPQAQRPRI 218 Query: 178 ARFYVTVGRNQL--AAKEVEI 196 A + + +L A K++ I Sbjct: 219 AYVRMLLTSGELEDAEKQLAI 239 >gi|66805627|ref|XP_636535.1| p67-like superoxide-generating NADPH oxidase [Dictyostelium discoideum AX4] gi|75013449|sp|Q867T7|NCFA_DICDI RecName: Full=NADPH oxidase activator; Short=NOX activator; AltName: Full=p67-phox-like factor gi|29028302|gb|AAO62420.1| p67-like superoxide-generating NADPH oxidase [Dictyostelium discoideum] gi|29367189|gb|AAO72634.1| p67-like superoxide-generating NADPH oxidase [Dictyostelium discoideum] gi|60464893|gb|EAL63008.1| p67-like superoxide-generating NADPH oxidase [Dictyostelium discoideum AX4] Length = 604 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 7/74 (9%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ-CS-RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y V+++K NF A EYFN+ + + M A + G+ A + Sbjct: 40 YNIGVMYIKSNNFRNAIEYFNRSVEQDKYLASSY-----YMRAIAHHMNGELNHAIVDYD 94 Query: 119 EYITQYPESKNVDY 132 E I++ + +DY Sbjct: 95 ETISKLRGHEYIDY 108 >gi|254475991|ref|ZP_05089377.1| tetratricopeptide TPR_2 [Ruegeria sp. R11] gi|214030234|gb|EEB71069.1| tetratricopeptide TPR_2 [Ruegeria sp. R11] Length = 189 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 19/136 (13%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + ++ + L+ A E+ + P A K A +S G + A + E Sbjct: 72 LLQRGLDALERGEPQMAVEHLTALTDHAP--DFA-KGWYERARAYFSVGLFGPAVADLER 128 Query: 120 YITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +T P+ DY + +G + + D + R + + + A Sbjct: 129 ALTLNPD----DYNAIFALG-TMFEQFNDPDR-------AYEAYQRAQAIHPHHEQITSA 176 Query: 179 RFYVTVGRNQLAAKEV 194 ++ + KE+ Sbjct: 177 LER---LKDTVEGKEL 189 >gi|332975199|gb|EGK12099.1| hypothetical protein HMPREF0476_0098 [Kingella kingae ATCC 23330] Length = 231 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 10/118 (8%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +A + K+ + K + A++S+++ G Q +G+ + Sbjct: 112 SQAQTWYKQGQYQKVLDLLRLHDSGGNGDANAQQSMILLLQSNQKLGYCQSVIQIGQRFA 171 Query: 122 TQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 T + + Y VG Q RD+ + +V RY N+P + A Sbjct: 172 TLFAQHDFAPEALYAVGQCQWQIQQRDI---------AKETWRNLVLRYPNTPAARRA 220 >gi|144897901|emb|CAM74765.1| protein conserved in bacteria [Magnetospirillum gryphiswaldense MSR-1] Length = 323 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 42/130 (32%), Gaps = 10/130 (7%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 + + S + + +Y+ A L+ +++ A + F +A + Sbjct: 184 KKPAPVVSSAAPKDAQGLYDMAYDALQGGDYATAEKGFQDFLAQHGSHQLAGNAQYWLGD 243 Query: 103 VQYSAGKY-QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + Y + A + E Y ++P+ + Y G ++ QM + K Sbjct: 244 IAYVRKDFNTSAVTFLEGY-KKFPKHSKAADMIYKAGSAFGQMGKK--------KEACTA 294 Query: 162 MSRIVERYTN 171 + + Sbjct: 295 FAILFNEQPK 304 >gi|295688125|ref|YP_003591818.1| tol-pal system protein YbgF [Caulobacter segnis ATCC 21756] gi|295430028|gb|ADG09200.1| tol-pal system protein YbgF [Caulobacter segnis ATCC 21756] Length = 289 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 39/120 (32%), Gaps = 15/120 (12%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + R + D Q S V Y ++ AR+++ G Sbjct: 168 FKQARQLLLD-GDYANAEQAFSAYVTNYPDNAKTPEARYWL--------------GETLF 212 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 R Y A + + + +A +L + VAL EA + + +RYP+ Sbjct: 213 VREAYTDAAAAYIGAIRGWPQTTWGPDATLKLARSMVALKKTAEACRTLDELSKRYPKAS 272 >gi|115380309|ref|ZP_01467319.1| TPR repeat, putative [Stigmatella aurantiaca DW4/3-1] gi|115362685|gb|EAU61910.1| TPR repeat, putative [Stigmatella aurantiaca DW4/3-1] Length = 197 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 43/131 (32%), Gaps = 8/131 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +E+ + + E + P A + + GK+ QA L + Sbjct: 36 FERGKAAFRRNDMKGTVEDLARFMAMNPSEADALDASFFLGAAYNNLGKHDQAVPLLARF 95 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + SK DY L+ SY + + T+ L + + Y + Y+ R Sbjct: 96 VDGDKRSKTRDYAMVLLAQSYQETNQ--------TEKALATVRDAIATYPATQYLGAMRA 147 Query: 181 YVTVGRNQLAA 191 + + QL Sbjct: 148 RLNSAKRQLGG 158 >gi|88812565|ref|ZP_01127813.1| TPR repeat protein [Nitrococcus mobilis Nb-231] gi|88790159|gb|EAR21278.1| TPR repeat protein [Nitrococcus mobilis Nb-231] Length = 918 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 14/110 (12%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A + L E A + P + ++ + F+++ G++ AA ++ + Sbjct: 233 RAQIELIENQLDAAEADIEALRKLAPTS---VQANHLLGFLRFRQGRFNDAALAYQDALR 289 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + + D +G++ Q + +Q SR +++Y +S Sbjct: 290 ---ANPDFDPAILWLGLTNYA--------QHNYEQAIQRFSRFLQKYPDS 328 >gi|308183384|ref|YP_003927511.1| paralysed flagella protein [Helicobacter pylori PeCan4] gi|308065569|gb|ADO07461.1| paralysed flagella protein [Helicobacter pylori PeCan4] Length = 803 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 188 PLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 247 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP + V Y V + + K ++Y RI+ Sbjct: 248 IKKSLLIDIGTKWIKNYPTDPGIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 299 Query: 168 RYTNSPYVKGARFYVTV 184 Y NS Y A+ + + Sbjct: 300 EYKNSRYAPLAQMRLAI 316 Score = 42.4 bits (99), Expect = 0.069, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPGIPEVLYY 276 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 277 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 315 >gi|149181840|ref|ZP_01860330.1| YvcD [Bacillus sp. SG-1] gi|148850479|gb|EDL64639.1| YvcD [Bacillus sp. SG-1] Length = 504 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 7/71 (9%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +KA L+ NF KA + Q +DFP ++ A + GK ++AA+ EE Sbjct: 158 DKARNLLESGNFQKAVDLLEQVIKDFPEYWSAYN-----NLALAYFYLGKTEKAAATLEE 212 Query: 120 YITQYPESKNV 130 + + P + + Sbjct: 213 VMEKNPGNLHA 223 >gi|302038038|ref|YP_003798360.1| hypothetical protein NIDE2729 [Candidatus Nitrospira defluvii] gi|300606102|emb|CBK42435.1| protein of unknown function [Candidatus Nitrospira defluvii] Length = 489 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 26/87 (29%), Gaps = 1/87 (1%) Query: 32 VCFLVGWERQSSRDVYLD-SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 V G S+ V V + ++ +A + +S A + + +P + Sbjct: 4 VAGCAGSPPTSTPAVVPPTETPTVAAETSLWYQASTAFSDGRYSAAIHLYERYLTTYPKS 63 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLG 117 A ++ G+ A Sbjct: 64 RRALEAHWDLGQAYEQMGEVTAAIKEY 90 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 13/103 (12%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A SL A +S G+Y A L E Y+T YP+S+ ++ +G +Y QM Sbjct: 29 AETSLWYQASTAFSDGRYSAAIHLYERYLTTYPKSRRALEAHWDLGQAYEQM-------- 80 Query: 153 RATKLMLQYMSRIV-----ERYTNSPYVKGARFYVTVGRNQLA 190 ++ + + Y + A+ + RNQ A Sbjct: 81 GEVTAAIKEYRTLTGPEGASLSAQNSYAERAQHRIDALRNQPA 123 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 22/50 (44%) Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 G Y AAI ++ L Y + A EA L +AY + + A + + Sbjct: 44 GRYSAAIHLYERYLTTYPKSRRALEAHWDLGQAYEQMGEVTAAIKEYRTL 93 >gi|308274104|emb|CBX30703.1| hypothetical protein N47_E42150 [uncultured Desulfobacterium sp.] Length = 355 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 27/208 (12%), Positives = 65/208 (31%), Gaps = 33/208 (15%) Query: 6 GRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE------RQSSRDVYLDSVTDVRYQRE 59 G+A I ++ +F L I++ + + + S E Sbjct: 15 GKASRIVHGEGEKIVRFFLIALILISLTGCASVQEDWRITKTQNSKSAYSSFLSNHPDSE 74 Query: 60 VYEKAVLFLKEQNFSKA-----YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 +A + + E + KA + + + P +++ +++ + K Sbjct: 75 YSAEARIKIDEFVWLKAKQENRVFEYEKFIKYNPNNIFVSEAIKNIKILEWESAKKDDTI 134 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK-LMLQYMS---------R 164 E+++ +YP Y + + ++ T+ Q +S + Sbjct: 135 ESYEKFLKKYPAGS---YA--------TKATDSIARIKKETELKAFQSVSNSKIRAKLIQ 183 Query: 165 IVERYTNSPYVKGARFYV-TVGRNQLAA 191 + Y S Y + + + N LA Sbjct: 184 FLNDYPKSEYREKIQERLSLFSSNTLAK 211 >gi|15677298|ref|NP_274452.1| hypothetical protein NMB1440 [Neisseria meningitidis MC58] gi|7226681|gb|AAF41801.1| hypothetical protein NMB1440 [Neisseria meningitidis MC58] gi|316984566|gb|EFV63531.1| periplasmic protein [Neisseria meningitidis H44/76] gi|325134580|gb|EGC57224.1| putative lipoprotein [Neisseria meningitidis M13399] gi|325140616|gb|EGC63136.1| putative lipoprotein [Neisseria meningitidis CU385] gi|325144741|gb|EGC67036.1| putative lipoprotein [Neisseria meningitidis M01-240013] gi|325199945|gb|ADY95400.1| putative lipoprotein [Neisseria meningitidis H44/76] gi|325205807|gb|ADZ01260.1| putative lipoprotein [Neisseria meningitidis M04-240196] Length = 237 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 42/125 (33%), Gaps = 11/125 (8%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S V + +Y +A+ K FS A +A++S+ + + G Sbjct: 111 SAHTVETAQNLYNQALKHYKSGKFSAAASLLKGADGGD-GGSIAQRSMYLLLQSRARMGN 169 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168 + +G Y ++ +S + +G + +D+ +++ Sbjct: 170 CESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIAR---------ATWRSLIQT 220 Query: 169 YTNSP 173 Y SP Sbjct: 221 YPGSP 225 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 7/52 (13%) Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 RF+ D+ A EAM ++ E L D AR + + YP Sbjct: 181 ANRFK-------DSPTAPEAMFKIGECQYRLQQKDIARATWRSLIQTYPGSP 225 >gi|77360807|ref|YP_340382.1| prenylyltransferase domain-containing protein [Pseudoalteromonas haloplanktis TAC125] gi|76875718|emb|CAI86939.1| putative periplasmic protein contains a protein prenylyltransferase domain [Pseudoalteromonas haloplanktis TAC125] Length = 248 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 43/130 (33%), Gaps = 21/130 (16%) Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 Y ++ + + + Y NS Y A +++ Sbjct: 134 YERAVALIMKDKRYD-------QAIPEFQTFLTTYPNSVYASNAHYWLGQLLTI------ 180 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 + A F++V+ + ++ +AM +L L EA+++++ + Sbjct: 181 --------KNNPAKATEHFKVVVNEFPNSNKRPDAMLKLGTLLQEQNLAAEAQKILNDLI 232 Query: 255 ERYPQGYWAR 264 +YP A+ Sbjct: 233 NQYPSTTAAK 242 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 48/133 (36%), Gaps = 19/133 (14%) Query: 56 YQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKS-----LLMSAFVQYSAGK 109 + E YE+AV +K++ + +A F +P + A + L++ Sbjct: 129 SENEAYERAVALIMKDKRYDQAIPEFQTFLTTYPNSVYASNAHYWLGQLLTI-----KNN 183 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 +A + + ++P S +G + +Q + ++ ++ +Y Sbjct: 184 PAKATEHFKVVVNEFPNSNKRPDAMLKLG--------TLLQEQNLAAEAQKILNDLINQY 235 Query: 170 TNSPYVKGARFYV 182 ++ K A + Sbjct: 236 PSTTAAKLATKRL 248 >gi|291231417|ref|XP_002735665.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii] Length = 474 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 76/212 (35%), Gaps = 28/212 (13%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D+++D Y VY +KE ++ A + + ++ P + R +L + + + Sbjct: 5 DNISDGEYSSTVY----TMIKEGKYTDAIQILSSEIQNHPRS---RAALSLLGYCYFYMQ 57 Query: 109 KYQQAASLGEEYITQYPESKNVDY-----------VYYLVGMSYAQMIRDVPYDQRATKL 157 + AA E+ + +P +N DY Y M I + Y+ + TK+ Sbjct: 58 DFVNAAECYEQLVQLHP--ENDDYKIYHAQSLYKACMYQEAMKATSQIENSSYEAKITKV 115 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 RY + A+ V + A EV +G K G Y A +F + Sbjct: 116 QAAI------RYGE-EDLPAAKSLVEQCPSDDADTEVNMGCLLFKEGRYEQACHKFTTAM 168 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 + + + V +Y LA A Sbjct: 169 Q-ILGYKPVLGILHKAVGSYFDLAADVLAENT 199 >gi|268326190|emb|CBH39778.1| hypothetical secreted protein, containing tetratricopeptide repeats [uncultured archaeon] Length = 435 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 15/120 (12%), Positives = 35/120 (29%), Gaps = 8/120 (6%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 +++ ++ N+ A FN+ P + G A S Sbjct: 28 EEQQYIDQGKAEYNRGNYDAAIYLFNKAVDLNPDNEYLYN---DLGLCYVALGDMDLAIS 84 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + I + + YY G++Y D K + ++ ++ ++ Sbjct: 85 EFSKAIEL---NSDCVEAYYNRGLAYFGQ--GGYKDTEPFKNAISDFTKTIKLEPDNVDA 139 >gi|255280318|ref|ZP_05344873.1| putative tetratricopeptide repeat-containing domain protein [Bryantella formatexigens DSM 14469] gi|255269409|gb|EET62614.1| putative tetratricopeptide repeat-containing domain protein [Bryantella formatexigens DSM 14469] Length = 318 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 91/245 (37%), Gaps = 34/245 (13%) Query: 26 IFFSIAVC-FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC- 83 + +++C L G + +V L ++ + ++++ ++ A F Sbjct: 8 LAAVLSMCMLLAGCRDKGPSEVELAR-----------DEGISYMEQADYQNAITAFENAY 56 Query: 84 ---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 P L A Q+ G ++ + ++NVD YY+ G + Sbjct: 57 SLCDEKMPETK--TDISLYEAACQFKMGDFEGVKDTCSRILEL---AENVD-AYYMRGAA 110 Query: 141 YAQM----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL--AAKEV 194 + ++ + +D A+ L + ++ Y + + L +E+ Sbjct: 111 FLKLGEAELAKADFD-AASLLAPEDYGLFLDIYKQYEEQNQSAVGDEYLQKALNIPGEEM 169 Query: 195 EIGRYYLKRG--EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E YY K Y+ + Q +LA ++A+H +EAM + E Y+AL AR V Sbjct: 170 E--DYYQKGSIYFYLGEYTKAQEMLAKPAEAKH-KEAMMLMGEVYLALGDSVHARNVYQQ 226 Query: 253 IQERY 257 E Y Sbjct: 227 YMEEY 231 >gi|85714375|ref|ZP_01045363.1| TPR repeat protein [Nitrobacter sp. Nb-311A] gi|85698822|gb|EAQ36691.1| TPR repeat protein [Nitrobacter sp. Nb-311A] Length = 307 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 29/129 (22%), Gaps = 22/129 (17%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 Y A + +YP Y +G S Q + + Sbjct: 186 EFDLGIGYMQRKDYALAEETMRNFTQKYPSDTLTGDAQYWLGESLFQRQK--------YR 237 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + +Y +S A + L KE AA V Sbjct: 238 EAAEVFLGVTTKYDSSAKAADALLRLGQSLAALKEKE--------------AACAALGEV 283 Query: 217 LANYSDAEH 225 Y A Sbjct: 284 TRKYPRASA 292 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 39/105 (37%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L + M ++Y + A++++ +R +Y A F V Sbjct: 201 LAEETMRNFTQKYPSDTLTGDAQYWLGESL--------------FQRQKYREAAEVFLGV 246 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y + A +A+ RL ++ AL + A + + +YP+ Sbjct: 247 TTKYDSSAKAADALLRLGQSLAALKEKEAACAALGEVTRKYPRAS 291 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 47/126 (37%), Gaps = 14/126 (11%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 L ++ R+ ++ + +++ ++++ A E ++ +P + + + Sbjct: 174 LTTLPPSATPRDEFDLGIGYMQRKDYALAEETMRNFTQKYPSDTLTGDAQYWLGESLFQR 233 Query: 108 GKYQQAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 KY++A E ++ T+Y S +G S A + + + + Sbjct: 234 QKYREA---AEVFLGVTTKYDSSAKAADALLRLGQSLAAL--------KEKEAACAALGE 282 Query: 165 IVERYT 170 + +Y Sbjct: 283 VTRKYP 288 >gi|301058980|ref|ZP_07199949.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] gi|300446976|gb|EFK10772.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] Length = 824 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 55/191 (28%), Gaps = 47/191 (24%) Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 ++ + F+ + G++ +A S+ + I P + Q + V Sbjct: 476 YSPFTVSAYENLGFIHFEMGQFHEAVSMYRKAIRIKPGKAEL-----------YQDLGTV 524 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA--AKEVEIGRYYLKRG-- 204 + SR ++ N ++ + R A E I + R Sbjct: 525 FLMHGQLDNAVSQFSRALKIRPNF-----VAAHLGLARAMGAKGRNEEAIAHF---REVL 576 Query: 205 ----EYVAAIPRFQLVLANYSDAEHA--EEA------------------MARLVEAYVAL 240 + A V A Y DA+ EA + L AY Sbjct: 577 KINPGNLEAANDLAWVFATYPDAKFRNGPEAVRLAKMVCEATEYKLPLPLDTLAAAYAES 636 Query: 241 ALMDEAREVVS 251 L D+A+E Sbjct: 637 GLFDKAQETAK 647 >gi|258626846|ref|ZP_05721653.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|262165946|ref|ZP_06033683.1| TPR repeat-containing protein [Vibrio mimicus VM223] gi|258580893|gb|EEW05835.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|262025662|gb|EEY44330.1| TPR repeat-containing protein [Vibrio mimicus VM223] Length = 253 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 56/143 (39%), Gaps = 14/143 (9%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 S+ + + + ++ Y+ AV LK+++++ A F + D+P + + S Sbjct: 119 SSNDEAAQGTFSSDANEQAAYQNAVDLILKKRDYAGAIAAFKKFQTDYPNSTFSANSHYW 178 Query: 100 SAFVQYSAGKYQQAASLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + ++ + ++A + +I + +S +G D+ + Sbjct: 179 LGQLYFAKKEDKEA---AKSFIAVVSHQDSNKRADALVKLG--------DIAKRNNNAEQ 227 Query: 158 MLQYMSRIVERYTNSPYVKGARF 180 ++ + ++ Y +S K A+ Sbjct: 228 ARKFYQQAIDEYPDSASAKVAKE 250 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + Y NS + A +G+ Y Sbjct: 139 YQNAVDLILKKRDYAGAIAAFKKFQTDYPNSTFS--------------ANSHYWLGQLYF 184 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + E A F V+++ D+ +A+ +L + ++AR+ + YP Sbjct: 185 AKKEDKEAAKSFIAVVSH-QDSNKRADALVKLGDIAKRNNNAEQARKFYQQAIDEYPDSA 243 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 244 SAKVAKESLK 253 >gi|254410505|ref|ZP_05024284.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196182711|gb|EDX77696.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 323 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 14/103 (13%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +A L++ F +A FN+ P A + FV Q A + + + Sbjct: 209 NRANARLEQGKFKEAIADFNRAIAVNP--NYA-QGYSNRGFVHLQQNDLQTALADLNQAL 265 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 P N YY G+++ Q+ + + + + Sbjct: 266 EINP---NYAQAYYHRGLTHVQLSNE--------EEAIADFQK 297 >gi|182414769|ref|YP_001819835.1| TPR repeat-containing protein [Opitutus terrae PB90-1] gi|177841983|gb|ACB76235.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1] Length = 1104 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 32/233 (13%), Positives = 70/233 (30%), Gaps = 41/233 (17%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 A+ I A +SS + + ++ + L+ + + A + + + Sbjct: 11 AVLILVIAAALLWFSPASRSSHATSAEFM-------QLMTRGNGLLENGDAAGAIDVYTR 63 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 P + + L A A + AA+ + + +N YYL+G + Sbjct: 64 AL---PLSPQSTDVRLNLANAYLLAERPMDAAAACRQVLDL---DRNNAAAYYLLGCALL 117 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + + Q +I + + A +E+ Sbjct: 118 RQNQ-----PEPAAEAFQQSWKIEPGIP----ALDFQMGM-------AQREL-------- 153 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 G AI F+ V+ A +L + Y + ++A + Q+ Sbjct: 154 -GHLPDAISLFESVVRAEP---AHPSAHYQLSQLYRRVGRAEDATRELQQHQQ 202 >gi|311694763|gb|ADP97636.1| tetratricopeptide TPR_2 repeat protein [marine bacterium HP15] Length = 923 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 28/69 (40%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 VY +A L + +A +F + P + VA ++ +A A + A + Sbjct: 581 VYRQAELAVSSGRLGEAVGHFRRVDSVLPGSDVAIRARYDAANTLLKASDWGAAVGDLQS 640 Query: 120 YITQYPESK 128 + +P+ + Sbjct: 641 FRADFPQHE 649 >gi|322420213|ref|YP_004199436.1| Sporulation domain-containing protein [Geobacter sp. M18] gi|320126600|gb|ADW14160.1| Sporulation domain-containing protein [Geobacter sp. M18] Length = 506 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 27/71 (38%), Gaps = 7/71 (9%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A + YY A + +L + EE + L ++Y A + ++A Sbjct: 35 ARNHYQESNYYF-------ASTWLERILKKFPATPQREEVLMMLAKSYAATSRDEKAIRT 87 Query: 250 VSLIQERYPQG 260 + + + +P+ Sbjct: 88 LKTLLKDFPKS 98 Score = 39.3 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 39/109 (35%), Gaps = 11/109 (10%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + C ++ + D + ++ +A +E N+ A Sbjct: 1 MNTVRTLLVAVVLACLIIPSASFAESD-----------EASMFAQARNHYQESNYYFAST 49 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 + + + FP + L+M A + + ++A + + +P+S Sbjct: 50 WLERILKKFPATPQREEVLMMLAKSYAATSRDEKAIRTLKTLLKDFPKS 98 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 8/77 (10%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 S+ A Y Y A++ E + ++P + + V ++ SYA RD Sbjct: 30 SMFAQARNHYQESNYYFASTWLERILKKFPATPQREEVLMMLAKSYAATSRD-------- 81 Query: 156 KLMLQYMSRIVERYTNS 172 + ++ + +++ + S Sbjct: 82 EKAIRTLKTLLKDFPKS 98 >gi|194098694|ref|YP_002001756.1| hypothetical protein NGK_1131 [Neisseria gonorrhoeae NCCP11945] gi|239998999|ref|ZP_04718923.1| hypothetical protein Ngon3_05900 [Neisseria gonorrhoeae 35/02] gi|240112986|ref|ZP_04727476.1| hypothetical protein NgonM_05321 [Neisseria gonorrhoeae MS11] gi|254493790|ref|ZP_05106961.1| periplasmic protein [Neisseria gonorrhoeae 1291] gi|268594847|ref|ZP_06129014.1| periplasmic protein [Neisseria gonorrhoeae 35/02] gi|268599065|ref|ZP_06133232.1| periplasmic protein [Neisseria gonorrhoeae MS11] gi|193933984|gb|ACF29808.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945] gi|226512830|gb|EEH62175.1| periplasmic protein [Neisseria gonorrhoeae 1291] gi|268548236|gb|EEZ43654.1| periplasmic protein [Neisseria gonorrhoeae 35/02] gi|268583196|gb|EEZ47872.1| periplasmic protein [Neisseria gonorrhoeae MS11] gi|317164292|gb|ADV07833.1| hypothetical protein NGTW08_0865 [Neisseria gonorrhoeae TCDC-NG08107] Length = 237 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S V + +Y +A+ + FS A +A++S+ + + G Sbjct: 111 SAHTVETAQNLYNQALKHYQNGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 169 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168 + +G Y ++ +S V + +G + +D+ +++ Sbjct: 170 CESVIEIGGRYANRFKDSPTAPEVIFKIGECQYRLQQKDIAR---------ATWRSLIQT 220 Query: 169 YTNSP 173 Y SP Sbjct: 221 YPGSP 225 >gi|148654935|ref|YP_001275140.1| hypothetical protein RoseRS_0774 [Roseiflexus sp. RS-1] gi|148567045|gb|ABQ89190.1| TPR repeat-containing protein [Roseiflexus sp. RS-1] Length = 1534 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 74/209 (35%), Gaps = 26/209 (12%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + +++ +L+ + +A +P A + M S +Y++A Sbjct: 7 QAAFDQTRQWLESDDLDRAIGMVQHILETYPKCLEAHQ---MLGEAFLSNRQYEEARIEF 63 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E+ ++ PE + +GM+ ++ + + R +E + P ++ Sbjct: 64 EKVLSFDPEH--IP-ALVGLGMTSERLGQLSS--------AIAAFERALEIKPDLPELRS 112 Query: 178 ARFYV-------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 + +L+ V + R Y K AI F+ V+A+ D +A Sbjct: 113 QLLRLYTEAWGSEYAHLRLSR--VGLARLYAKGHMLPQAISEFRQVVADQPD---RLDAR 167 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQ 259 L EA +EA EV I +P Sbjct: 168 VALAEALWRDEQEEEALEVCRAILVSHPD 196 >gi|91200049|emb|CAJ73091.1| hypothetical protein kuste2346 [Candidatus Kuenenia stuttgartiensis] Length = 224 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 40/134 (29%), Gaps = 11/134 (8%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN---- 72 Y+++ V + + SR + R ++ A E++ Sbjct: 23 YKIFIGIGVAVVISIAAVTVTFVKAKSRKDETAWQSMWRINSDLAMAAQAGKTEKDKNEA 82 Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK---- 128 + A E F +G L V Y Y +A +++ +Y Sbjct: 83 LNNAIESFEYIEEALASSGTTPWILFQKGNVYYELKNYDEAIRAYNDFLQRYSGHPIAFL 142 Query: 129 ---NVDYVYYLVGM 139 ++ Y Y G+ Sbjct: 143 AKQSLGYAYEEKGL 156 Score = 39.7 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 11/95 (11%), Positives = 35/95 (36%), Gaps = 11/95 (11%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQRE-----------VYEKAVLFLKEQNFSKAYE 78 +A+ G + + +++ Y E +++K ++ + +N+ +A Sbjct: 66 LAMAAQAGKTEKDKNEALNNAIESFEYIEEALASSGTTPWILFQKGNVYYELKNYDEAIR 125 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 +N + + +A + + G ++A Sbjct: 126 AYNDFLQRYSGHPIAFLAKQSLGYAYEEKGLLEEA 160 >gi|262191199|ref|ZP_06049399.1| TPR domain protein in aerotolerance operon [Vibrio cholerae CT 5369-93] gi|262032939|gb|EEY51477.1| TPR domain protein in aerotolerance operon [Vibrio cholerae CT 5369-93] Length = 624 Score = 45.1 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 48/133 (36%), Gaps = 14/133 (10%) Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63 +L A+C+F F+L + F +++ W S + D + E Y + Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361 Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117 A ++ + A Y+ + ++ + A G+ Q+A L Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQTGELQKAQDLY 420 Query: 118 EEYITQYPESKNV 130 E+ + Q P ++ Sbjct: 421 EQVLKQEPNHQDA 433 >gi|172036671|ref|YP_001803172.1| hypothetical protein cce_1756 [Cyanothece sp. ATCC 51142] gi|171698125|gb|ACB51106.1| hypothetical protein cce_1756 [Cyanothece sp. ATCC 51142] Length = 309 Score = 45.1 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 37/123 (30%), Gaps = 15/123 (12%) Query: 58 REVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAAS 115 R Y + ++ K N+ +A E + + + A + QA + Sbjct: 141 RAYYNQGLVHYKLGNYQQALESYNQALETNHEDSLEHKTWIYYDRALAYLKLENFSQAIA 200 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SP 173 + P+ YY G +Y ++ + + + ++ S Sbjct: 201 NFTHVLILNPQDLQ---AYYQRGYAYQKL--------GNYQGAFRDFTEVITLNPQLTSA 249 Query: 174 YVK 176 Y+ Sbjct: 250 YIN 252 Score = 38.9 bits (90), Expect = 0.65, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 79/269 (29%), Gaps = 82/269 (30%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y + F A+ F +G+ SS ++ + + + +L EQN+ +A Sbjct: 6 YLVKDFLKFFVLIAAILFCLGFSSPSSENLSNSPD---------FSQGIRYLNEQNYQEA 56 Query: 77 YEYFNQC---SRDFPFAGVARK-----------------------------SLLMSAFVQ 104 F Q + + + + + L Sbjct: 57 ILKFTQVINDKNQWIASAYSNRCLAYLQVNNNQAAKIDCEEALERNSENIEAYLNKGLAD 116 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y Y Q+ +E I ++ + DY YY G+ + ++ + L+ + Sbjct: 117 YRLENYTQSLVAYQEVIKRH-KH---DYRAYYNQGLVHYKL--------GNYQQALESYN 164 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-----IGRY------------------- 199 + +E N + ++ R LA ++E I + Sbjct: 165 QALET--NHEDSLEHKTWIYYDR-ALAYLKLENFSQAIANFTHVLILNPQDLQAYYQRGY 221 Query: 200 -YLKRGEYVAAIPRFQLVLANYSDAEHAE 227 Y K G Y A F V+ A Sbjct: 222 AYQKLGNYQGAFRDFTEVITLNPQLTSAY 250 >gi|300866716|ref|ZP_07111400.1| exported hypothetical protein [Oscillatoria sp. PCC 6506] gi|300335316|emb|CBN56560.1| exported hypothetical protein [Oscillatoria sp. PCC 6506] Length = 201 Score = 45.1 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 62/188 (32%), Gaps = 29/188 (15%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 +YK + A+ L + + +T + + +++ V L + ++S Sbjct: 1 MKSIYKAITFLGLIAALSGL----PSAVKAELSPIITAQKSIDQFFDRGVDKLLKGDYSG 56 Query: 76 AYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A E F + R P + + A G Q A + + I P Y Sbjct: 57 AIEDFTEAIRLNPNQPGIYSNRG---LARAS--KGDIQGAIADYNQAIRINPN-----YA 106 Query: 134 --YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Y G++Y+ + + + L + + N + A + R+ L Sbjct: 107 IGYLHRGLAYSAL--------KNYQYALSDYDQALRLNPN---LGEAYYNRGNIRHYLKE 155 Query: 192 KEVEIGRY 199 KE + + Sbjct: 156 KEAALADF 163 >gi|116619354|ref|YP_821510.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116222516|gb|ABJ81225.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 343 Score = 45.1 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 59/217 (27%), Gaps = 34/217 (15%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D+ + + +E L++Q F+ A + + + L Y Sbjct: 122 DAGAREKAESLYFEAVQPLLQQQKFADAIAILGTATERL---KNSAQLELALGVAYYGMR 178 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 ++ +AA I S +D Y +G + I T+ +R Sbjct: 179 RFDEAAGAFLRTIAI---SPAIDQPYLFLGK-FLGQIPG--RLPEVTEQ----FARYERA 228 Query: 169 YTNS------------------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 S + + A+ E+G + +Y A Sbjct: 229 SPESSTGYLLHAKALNAQSIEPEAARKLLEKALSINERDASGHFELGSVLDRMQQYADAA 288 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 F+ + A RL Y L D AR Sbjct: 289 REFERAIEL---DPAEPAAHYRLSRVYDRLGKPDAAR 322 >gi|325917649|ref|ZP_08179843.1| tetratricopeptide repeat protein,von Willebrand factor type A-like protein [Xanthomonas vesicatoria ATCC 35937] gi|325536113|gb|EGD07915.1| tetratricopeptide repeat protein,von Willebrand factor type A-like protein [Xanthomonas vesicatoria ATCC 35937] Length = 608 Score = 45.1 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 9/111 (8%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 ++ + +C L + + D L D Q+ + + V ++ +F+ A + Sbjct: 323 FRRRAVVAMVALMCVLPLAQPAQAADGTLWQRADQVQQQRL-DAGVQAYRKGDFAAAQKA 381 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 F + L G+Y +A + + + Q+P+ + Sbjct: 382 FEGVP--------TDEGLYNLGNALARQGQYDEAIAAYDRALKQHPKQADA 424 >gi|325105744|ref|YP_004275398.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter saltans DSM 12145] gi|324974592|gb|ADY53576.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter saltans DSM 12145] Length = 468 Score = 45.1 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 69/205 (33%), Gaps = 32/205 (15%) Query: 63 KAVLFLKEQNFSKAYE-YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + ++ + +A E F + + L+ A+V + G Y+QA + + Sbjct: 109 RGNIYENLGRYDEALEALFKALE----HTDMQEEVLMQIAYVYQNLGDYEQAIEYLKRCL 164 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + E+++ Y + Y + + +Q+ + ++ S Y Sbjct: 165 QKNMENQD---ALYELAFCYDVLDKQ--------DESIQFYQQYIDNEPYS-YAAWYNLG 212 Query: 182 VTVGRNQLAAKEVEIGRY-----------YLKRGEYVAAIPRFQLVLANYSDA--EHAEE 228 + ++ K ++ Y Y +G + + +F+ + + + Sbjct: 213 NAYHKYEMFEKAIDAYDYALLIKEDFSSAYFNKGNTLIQLNKFEEAIEVFKQTFDYEMPD 272 Query: 229 AMAR--LVEAYVALALMDEAREVVS 251 A + E Y L M+EAR Sbjct: 273 AHTYCAIGECYEKLEKMEEARNYYK 297 >gi|229522839|ref|ZP_04412253.1| TPR domain protein in aerotolerance operon [Vibrio cholerae TM 11079-80] gi|229340056|gb|EEO05064.1| TPR domain protein in aerotolerance operon [Vibrio cholerae TM 11079-80] Length = 623 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 48/133 (36%), Gaps = 14/133 (10%) Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63 +L A+C+F F+L + F +++ W S + D + E Y + Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361 Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117 A ++ + A Y+ + ++ + A G+ Q+A L Sbjct: 362 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQTGELQKAQDLY 420 Query: 118 EEYITQYPESKNV 130 E+ + Q P ++ Sbjct: 421 EQVLKQEPNHQDA 433 >gi|186517170|ref|NP_195462.3| SRFR1 (SUPPRESSOR OF RPS4-RLD 1); protein complex scaffold [Arabidopsis thaliana] gi|332661397|gb|AEE86797.1| suppressor of RPS4-RLD 1 / tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] Length = 1052 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 40/191 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + + E N++KA F++ +P ++L+ + + A + Sbjct: 302 SRGIAQVNEGNYTKAISIFDKVLKEEPTYP------EALIGRGTAYAFQRELESAIADFT 355 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + I P + G + A + V ++ +++ + NSP V Sbjct: 356 KAIQSNPA---ASEAWKRRGQARAALGEYV--------EAVEDLTKALVFEPNSPDVL-- 402 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 E I + K ++ AA+ + L D + A L A+ Sbjct: 403 -------------HERGIVNF--KSKDFTAAVKDLSICLKQEKDNKSAY---TYLGLAFA 444 Query: 239 ALALMDEAREV 249 +L +A E Sbjct: 445 SLGEYKKAEEA 455 >gi|73993539|ref|XP_534539.2| PREDICTED: similar to Tetratricopeptide repeat protein 10 (TPR repeat protein 10) (Recessive polycystic kidney disease protein Tg737) (TgN(Imorpk)737Rpw) [Canis familiaris] Length = 825 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 32/240 (13%), Positives = 73/240 (30%), Gaps = 40/240 (16%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99 Q+S L +D + K ++ KA E++ D + +L Sbjct: 469 QASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYN 524 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + +A ++ + +N V Y + Y M + Sbjct: 525 IGLTYKRLNRLDEALDC---FLKLHTILRNSAQVLYQIANVYELM--------EDPHQAI 573 Query: 160 QYMSRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVL 217 +++ +++ +S A + + K + +YY + Y + I + + Sbjct: 574 EWLMQLISVVPTDSR----ALSKLGELYDSEGDKS-QAFQYYYESYRYFPSNIEVIEWLG 628 Query: 218 ANYSDAEHAEEAMARLVEA-----------------YVALALMDEAREVVSLIQERYPQG 260 A Y D + E+A+ A + +A + I ++P+ Sbjct: 629 AYYIDTQFCEKAIQYFERASLIQPVSLKWKLMVASCFRRSGNYQKALDTYKDIHRKFPEN 688 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 74/233 (31%), Gaps = 67/233 (28%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KA+ +L++++F++A E + + V + +F+ Y ++ QA+S Sbjct: 421 NKAITYLRQKDFNQAVETLKMFEKKD--SRVKSAAATNLSFLYYLENEFAQASSYADLAV 478 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 479 NSDRY---NPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKRLNR- 534 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y + Sbjct: 535 -------LDEALDCFLKLHTILRNS-----------------AQVLYQIANVYELMEDPH 570 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 AI + ++ S A+++L E Y + +A + +P Sbjct: 571 QAI---EWLMQLISVVPTDSRALSKLGELYDSEGDKSQAFQYYYESYRYFPSN 620 >gi|258621417|ref|ZP_05716451.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258586805|gb|EEW11520.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 253 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 56/143 (39%), Gaps = 14/143 (9%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 S+ + + + ++ Y+ AV LK+++++ A F + D+P + + S Sbjct: 119 SSNDEAAQGTFSSDANEQAAYQNAVDLILKKRDYAGAIAAFKKFQTDYPNSTFSANSHYW 178 Query: 100 SAFVQYSAGKYQQAASLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + ++ + ++A + +I + +S +G D+ + Sbjct: 179 LGQLYFAKKEDKEA---AKSFIAVVSHQDSNKRADALVKLG--------DIAKRNNNAEQ 227 Query: 158 MLQYMSRIVERYTNSPYVKGARF 180 ++ + ++ Y +S K A+ Sbjct: 228 ARKFYQQAIDEYPDSASAKVAKE 250 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + Y NS + A +G+ Y Sbjct: 139 YQNAVDLILKKRDYAGAIAAFKKFQTDYPNSTFS--------------ANSHYWLGQLYF 184 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + E A F V+++ D+ +A+ +L + ++AR+ + YP Sbjct: 185 AKKEDKEAAKSFIAVVSH-QDSNKRADALVKLGDIAKRNNNAEQARKFYQQAIDEYPDSA 243 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 244 SAKVAKESLK 253 >gi|260433776|ref|ZP_05787747.1| tetratricopeptide TPR_2 repeat protein [Silicibacter lacuscaerulensis ITI-1157] gi|260417604|gb|EEX10863.1| tetratricopeptide TPR_2 repeat protein [Silicibacter lacuscaerulensis ITI-1157] Length = 500 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 45/132 (34%), Gaps = 33/132 (25%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + + ++++ A F P+ + Q AG+Y +A+ + Sbjct: 329 QQGQIAMNHKDYAAASTLFQD-----PYHR---------GYAQLKAGQYAEASET---FA 371 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + + GM+ IR+ R + + +ER + A + Sbjct: 372 QL--STPEAAFAE---GMA---RIRN-----RQYRPAIAAFETALERRPD---WPEAAYN 415 Query: 182 VTVGRNQLAAKE 193 + V + LA E Sbjct: 416 LAVAQAILAEVE 427 >gi|254443494|ref|ZP_05056970.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] gi|198257802|gb|EDY82110.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] Length = 413 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 84/236 (35%), Gaps = 27/236 (11%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LD + YE A+ K + A YF+ L + Sbjct: 51 KKTLDPELASEQVMQYYEAAITEWKGGDVEFAERYFSAALGVPTEVPEKEMVLSKMGELY 110 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY----------------AQMIRDV 148 +G + +AA++ E T++P+S+ + VY +G Y +V Sbjct: 111 NKSGMFPKAAAIYERLATEFPDSRRLPEVYMAIGNIYRKMGAQELAISRYYMVLNSSLNV 170 Query: 149 PYDQR--------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVG-RNQLAAKEVEIGRY 199 +DQ KL + + E Y S + A F + + +L + Sbjct: 171 SFDQLEKYRQLSLDAKLAIAETHKEREEYQESYRLYQALFRLELRPVERLRVH-YRMCYL 229 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQ 254 + Y A+ + +L L Y ++ H E L ++Y L EA REVV ++Q Sbjct: 230 LYELANYQQAVSQLKLFLDEYPESPHNPELRYLLAKSYERLNRKPEALREVVHILQ 285 >gi|325922264|ref|ZP_08184045.1| tetratricopeptide repeat protein,von Willebrand factor type A-like protein [Xanthomonas gardneri ATCC 19865] gi|325547217|gb|EGD18290.1| tetratricopeptide repeat protein,von Willebrand factor type A-like protein [Xanthomonas gardneri ATCC 19865] Length = 614 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 29/74 (39%), Gaps = 8/74 (10%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 Q++ + V ++ +F+ A + F + L G+Y +A + Sbjct: 362 QQQRLDAGVQAYRKGDFAAAQKAFE--------GVHTDEGLYNLGNALARQGQYDEAIAA 413 Query: 117 GEEYITQYPESKNV 130 + + Q+P+ ++ Sbjct: 414 YDRALKQHPDQQDA 427 >gi|258405417|ref|YP_003198159.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] gi|257797644|gb|ACV68581.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] Length = 360 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 42/114 (36%), Gaps = 11/114 (9%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + + + F+ A L+ +++ + ++ + + KA + F Sbjct: 16 RALVALLFAFACLSLLNPVSGWTQNGQTP-----QDPTAIFREGSNAMALGKLDKAVQLF 70 Query: 81 NQCSRDFPFAGVA----RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 R P +G + +S + A V Y+ +AA+ E + YP++ Sbjct: 71 KTIPR--PESGESGKLFVQSRMQLARVYYAQEDLDKAAAACREILAVYPDNAEA 122 >gi|186684446|ref|YP_001867642.1| hypothetical protein Npun_R4324 [Nostoc punctiforme PCC 73102] gi|186466898|gb|ACC82699.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102] Length = 763 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 30/233 (12%), Positives = 71/233 (30%), Gaps = 40/233 (17%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ K +A ++Q F ++ ++ G+ ++A + ++ Sbjct: 470 LFAKGNALFNLGRLEEAIASYDQALN---FKPDDHQAWYNRGIALFNLGRLEEAIASYDQ 526 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P+ +Y G++ + R + + + + + Sbjct: 527 ALNFKPDDHQ---AWYNRGIALFNLGR--------LEEAIASYDQALNFKPDKDNAW--N 573 Query: 180 FYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYSDA--- 223 L E I Y + RG + + R + +A++ A Sbjct: 574 NRGIALVE-LGRLEEAIASYDQALNFKPDDHQAWYNRGIALFNLGRLEEAIASFDQALNF 632 Query: 224 -EHAEEAMARLVEAYVALALMDEA----REVVSLIQERYPQGYWARYVETLVK 271 EA A V L ++EA + + + + + W + LVK Sbjct: 633 KPDYHEAWYNRGTALVELGRLEEAIASFDQAIKIKSDDHQ--AWNNWGYALVK 683 >gi|225620729|ref|YP_002721987.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] gi|225215549|gb|ACN84283.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] Length = 771 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 28/217 (12%), Positives = 73/217 (33%), Gaps = 43/217 (19%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ + + ++ + + +A + + + P + + + F + + Y++A Sbjct: 104 EKAYFNRGLIKSNLEMYKEAIDDYTKVIELNPNNEI---AYINRGFAKSNLEMYEEAIHD 160 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 I P +K ++Y I D + + + Y ++ +E N Sbjct: 161 YINVIELNPNNK----------LAYIN-IGFTKSDLKMYEEAIYYFNKSIELDPN----- 204 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD--AEHAEEAMARLV 234 ++ + L Y AI F V+ + + + A+++L Sbjct: 205 ---DKISYISRGFSK---------LNLKMYEEAIKDFDKVIELNPNDESAYFNRALSKL- 251 Query: 235 EAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270 L + +EA ++ +I+ Y L+ Sbjct: 252 ----NLEIYEEAIKDFTKVIEANNKN----EYAYLLI 280 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 44/112 (39%), Gaps = 13/112 (11%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 +D + + + +A+ L + + +A + F + + L+ F Sbjct: 227 KDFDKVIELNPNDESAYFNRALSKLNLEIYEEAIKDFTKVIEANNKNEY---AYLLIVFA 283 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS------YAQMIRDVP 149 Q + KY+++ + ++ I ++ Y YYL +S Y + I D+ Sbjct: 284 QINLKKYRESINYIDKAIELN-NNR---YWYYLRFLSKINLGKYNEAINDIN 331 >gi|163746798|ref|ZP_02154155.1| adenylyl cyclase class-3/4/guanylyl cyclase [Oceanibulbus indolifex HEL-45] gi|161379912|gb|EDQ04324.1| adenylyl cyclase class-3/4/guanylyl cyclase [Oceanibulbus indolifex HEL-45] Length = 565 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 36/170 (21%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA-QMIRDVPYDQRATKL 157 F +++ A + + + P NV MS + + + L Sbjct: 409 ELGFAHLYRKEHEAALNAYDRALKLNPNDANV--------MSDMADALAHSGRSEESIDL 460 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + + M R+ Y + YV +G Y + R+ + Sbjct: 461 LQKAM-RLNPFYPD-QYVW------------------HLGGAYFN-------LKRYDDAI 493 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 ++ E L +Y L DEA+ ++ +P R+ + Sbjct: 494 KTIQKMQNPTEGRRILAASYAYLGRKDEAQSEADRVRRAHPDFAAERWAD 543 >gi|156744125|ref|YP_001434254.1| TPR repeat-containing CheR-type MCP methyltransferase [Roseiflexus castenholzii DSM 13941] gi|156235453|gb|ABU60236.1| MCP methyltransferase, CheR-type with Tpr repeats [Roseiflexus castenholzii DSM 13941] Length = 502 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 48/142 (33%), Gaps = 24/142 (16%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E+A + +A + P + +A ++L++ A V G+ A + + Sbjct: 348 EQAQALIDAGRIDEAMDLLRSI---HPNSSLAPRALVLVARVHADRGELDLAIAEARRAL 404 Query: 122 TQYPESKNVD----YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 +D Y L+G YA+ + +Q + R ++ V Sbjct: 405 -------EIDALRSDAYLLIGTIYARQGQG--------NEAIQALERARYLDPDAALVSY 449 Query: 178 --ARFYVTVGRNQLAAKEVEIG 197 A Y GR + A +E Sbjct: 450 HLALAYRQAGRQEQAMREFRSA 471 >gi|156346795|ref|XP_001621532.1| hypothetical protein NEMVEDRAFT_v1g221878 [Nematostella vectensis] gi|156207578|gb|EDO29432.1| predicted protein [Nematostella vectensis] Length = 640 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 63/197 (31%), Gaps = 45/197 (22%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR---KSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ + +A ++ + R + + K+ L+ Y GKY++A +E Sbjct: 275 GNTHYQQGKYEEAIGHYKEALRLYQKTSDDQGQGKAHLLIGNTHYQQGKYEEARGHYKEA 334 Query: 121 ITQYPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + Y ++ + D + L+G ++ Q Q + + + Y + + Sbjct: 335 LRLYQKTSD-DQGQGKAHLLIGNTHDQ--------QGKYEEARGHYKEALRLYQKTSDDQ 385 Query: 177 ---GARFYVTVGRNQLAAKEVEIGRY------YLKR--------------------GEYV 207 A + NQ E IG Y Y K G+Y Sbjct: 386 GQGKAHLLIGNTHNQQGKYEEAIGHYKEALRLYQKTSDDQGQGEAHLLIGNTHYQQGKYE 445 Query: 208 AAIPRFQLVLANYSDAE 224 AI ++ L Y Sbjct: 446 EAIGHYKEALRLYQKTS 462 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 75/235 (31%), Gaps = 53/235 (22%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y++ ++ +A + + S D + L+ Y GKY++A +E Sbjct: 239 YQQGKYEEAIGHYKEALRLYQKTSDDQGQGE----AHLLIGNTHYQQGKYEEAIGHYKEA 294 Query: 121 ITQYPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + Y ++ + D + L+G ++ Q Q + + + Y + + Sbjct: 295 LRLYQKTSD-DQGQGKAHLLIGNTHYQ--------QGKYEEARGHYKEALRLYQKTSDDQ 345 Query: 177 ---GARFYVTVGRNQLAAKEVEIGRY------YLKR--------------------GEYV 207 A + +Q E G Y Y K G+Y Sbjct: 346 GQGKAHLLIGNTHDQQGKYEEARGHYKEALRLYQKTSDDQGQGKAHLLIGNTHNQQGKYE 405 Query: 208 AAIPRFQLVLANYSDAEHAE---EAMARLVEAYVALALMDEA----REVVSLIQE 255 AI ++ L Y + EA + + +EA +E + L Q+ Sbjct: 406 EAIGHYKEALRLYQKTSDDQGQGEAHLLIGNTHYQQGKYEEAIGHYKEALRLYQK 460 Score = 43.2 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 60/190 (31%), Gaps = 43/190 (22%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVAR---KSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 + + +A ++ + R + + K+ L Y GKY++A +E + Y + Sbjct: 41 QGKYEEAIGHYKEALRLYQRTSDDQGQGKAHLFIGNAHYQQGKYEEAIGHYKEALRLYQK 100 Query: 127 SKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK---GARF 180 + + + L+G ++ Q Q + + + Y + + A Sbjct: 101 TSDDQGQGEAHLLIGNTHDQ--------QGKYEEARGHYKEALRLYQKTSDDQGQGKAHV 152 Query: 181 YVTVGRNQLAAKEVEIGRY------YLKR--------------------GEYVAAIPRFQ 214 + +Q E IG Y Y K G+Y AI ++ Sbjct: 153 LIGHKHDQQGKYEEAIGHYKEALRLYQKTSDDQGQGKAHLLIGNTHNQQGKYEEAIGHYK 212 Query: 215 LVLANYSDAE 224 L Y Sbjct: 213 EALRLYQKTS 222 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 58/168 (34%), Gaps = 28/168 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y++ ++ +A + + S D + L+ Y GKY++A +E Sbjct: 439 YQQGKYEEAIGHYKEALRLYQKTSDDQGQGE----AHLLIGITHYLQGKYEEAIGHFKEA 494 Query: 121 ITQYPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + Y ++ + D + L+G ++ Q Q + + + + Y Sbjct: 495 LRLYQKTSD-DQGQGGAHLLIGNTHYQ--------QGKYEEAIGHSKEALRLY---QKTS 542 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + + + IG + +G+Y AI F+ L Y Sbjct: 543 DDQGH--------GEAHLLIGITHYLQGKYEEAIGHFKEALRLYQKTS 582 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 61/189 (32%), Gaps = 45/189 (23%) Query: 72 NFSKAYEYFNQCSRDFP-FAGVARK--SLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 N+ +A E++ + R + + R+ + L+ GKY++A +E + Y + Sbjct: 3 NYEEAIEHYKEALRLYQKTSDDQRQGKAHLLIGNAHNLQGKYEEAIGHYKEALRLYQRTS 62 Query: 129 NVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK---GARFY 181 + D + +G ++ Q Q + + + + Y + + A Sbjct: 63 D-DQGQGKAHLFIGNAHYQ--------QGKYEEAIGHYKEALRLYQKTSDDQGQGEAHLL 113 Query: 182 VTVGRNQLAAKEVEIGRY------YLKR--------------------GEYVAAIPRFQL 215 + +Q E G Y Y K G+Y AI ++ Sbjct: 114 IGNTHDQQGKYEEARGHYKEALRLYQKTSDDQGQGKAHVLIGHKHDQQGKYEEAIGHYKE 173 Query: 216 VLANYSDAE 224 L Y Sbjct: 174 ALRLYQKTS 182 >gi|153806295|ref|ZP_01958963.1| hypothetical protein BACCAC_00551 [Bacteroides caccae ATCC 43185] gi|149130972|gb|EDM22178.1| hypothetical protein BACCAC_00551 [Bacteroides caccae ATCC 43185] Length = 277 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 44/121 (36%), Gaps = 13/121 (10%) Query: 19 LYKFALTIFFSIAV-CFLVGWER------QSSRDVYLDSVT--DVRYQREVYEKAVLFLK 69 + K IF S++V CF + +++D+ T D + + K Sbjct: 1 MKKILFFIFLSMSVTCFAQDSLSIEPRQINEADSIHVDTHTLLDNKLEDVTKTKGDSAYI 60 Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 +++++ A + + ++ A + Y G+ +A E + P + + Sbjct: 61 KEDYAAAIQIYEALLKN----REASEVYYNLGNSYYKIGEIAKAVLNYERALLLQPGNSD 116 Query: 130 V 130 + Sbjct: 117 I 117 >gi|108757662|ref|YP_629584.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622] gi|108461542|gb|ABF86727.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622] Length = 1089 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 4/90 (4%) Query: 62 EKAVL--FLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+A + + +A + +P + A A Y G+Y +AA L Sbjct: 479 EEAQTRNAFEVADARQAMKLLGADFVSRYPRSENALVVKFNIARAYYEDGEYPKAAELFT 538 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 + +P+ K L + + + D Sbjct: 539 AFALSHPQHKEAPIAGNL-ALDSLRQLNDF 567 Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 50/145 (34%), Gaps = 22/145 (15%) Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 ++I + D + R++ + N+PY+ +F ++ K + YYL+ Sbjct: 40 ELIAKLKRDIFKVDRAIGETERLISKSRNAPYLPDLQFRLSELY---VEKSRYV--YYLQ 94 Query: 203 -----RGEYVA------------AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 G A A+ + +L Y D + ++ L L DE Sbjct: 95 AESRPEGASGAIVSPETRLLKQKAVQMYYRLLREYPDFKDGDQVTFYLAHEQRELGQFDE 154 Query: 246 AREVVSLIQERYPQGYWARYVETLV 270 + + + ++P E ++ Sbjct: 155 MLKTLGDLTRKFPGSPLRLEAEQIL 179 >gi|225618957|ref|YP_002720183.1| response regulator aspartate phosphatase containing TPR repeat domain [Brachyspira hyodysenteriae WA1] gi|225213776|gb|ACN82510.1| response regulator aspartate phosphatase containing TPR repeat domain [Brachyspira hyodysenteriae WA1] Length = 144 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 8/97 (8%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 IF + V L+ SV + +Y + + EK +N+ A Y+ Sbjct: 5 FIFLAAVVFLLISCAS-----AVKISVEEGQYPKIIAEKGYTEFGNKNYKTAIAYYQYII 59 Query: 85 RDFPFAGVARK---SLLMSAFVQYSAGKYQQAASLGE 118 +F A+ + F Y KY++A + Sbjct: 60 DNFDRENYAKDVAWAYYEIGFCYYYQKKYEEALKYFD 96 >gi|225620444|ref|YP_002721701.1| hypothetical protein BHWA1_01527 [Brachyspira hyodysenteriae WA1] gi|225215263|gb|ACN83997.1| hypothetical protein BHWA1_01527 [Brachyspira hyodysenteriae WA1] Length = 417 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 28/233 (12%), Positives = 66/233 (28%), Gaps = 27/233 (11%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 + D +V ++ A +++ A ++ +P + + S Sbjct: 194 KKETDKPAKAVETNPEIIALFNSAEELKNVKDYENAINAYSNIITSYPNSKYSVYSHFRI 253 Query: 101 AFVQYSAGKYQQAASLGEEYITQ-YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + Y A ++ E + Y +G+ + +D + Sbjct: 254 GDIYNQKKDYNNAFNMYNEASKLKNSGNNEKAAAIYSMGV---MKKSENKHD-----EAI 305 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 Y + ++ Y+ +P A + + QL I + L Sbjct: 306 VYFNDVMNNYSQTPLYGNAVYEMADSLKQLGR----ISD----------GANILEKSLEK 351 Query: 220 YSDAEHAEEAMARLVEAYVA----LALMDEAREVVSLIQERYPQGYWARYVET 268 +++ L E Y + ++A + + YP A+Y Sbjct: 352 NVKFSKRGDSILLLAEIYEKGNNNIRDFEKAYKTYNQYLAEYPTSSKAKYAND 404 >gi|118578955|ref|YP_900205.1| hypothetical protein Ppro_0516 [Pelobacter propionicus DSM 2379] gi|118501665|gb|ABK98147.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM 2379] Length = 673 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 64/200 (32%), Gaps = 24/200 (12%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A + + + +A E +++ + P + L A + + A + + Sbjct: 382 ADIRYERGFYQEAVEQYSEFLKLKPDSP---DIQLKLARILAKKKETSLAIDAYDAVLKS 438 Query: 124 YPESKNVDY---VYYL------VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 P++ + Y +++ + ++ D T+ +V Y + Sbjct: 439 APDNPEANREIAALYKAKGMNDRAVAHYRKALELRKDDADTRSA------LVSLYVKNRQ 492 Query: 175 VKGARFYVTVGRNQL---AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 + A ++G + + EY +AI +Q D A+ Sbjct: 493 YDEITELLKGAVELFPEDANNHYKLGLIHEFKKEYGSAIACYQKAAELRPD---HARALN 549 Query: 232 RLVEAYVALALMDEAREVVS 251 L Y+ + EARE + Sbjct: 550 ALGRMYMKTDRISEAREALE 569 >gi|116199257|ref|XP_001225440.1| hypothetical protein CHGG_07784 [Chaetomium globosum CBS 148.51] gi|88179063|gb|EAQ86531.1| hypothetical protein CHGG_07784 [Chaetomium globosum CBS 148.51] Length = 453 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 18/146 (12%), Positives = 40/146 (27%), Gaps = 26/146 (17%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSA 107 T ++ + ++ A + + + + P + ++ Sbjct: 2 ATPEEKATDLKNQGNKAFAAHDWPTAIDLYTQAIELNSKEP-TFWSNRAQ-----AYLKT 55 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 Y A + I P YY +YA ++R K ++ V+ Sbjct: 56 EAYGFAVRDATKAIELKPSFVK---AYYRRATAYAAILR--------PKEAVKDFKTCVK 104 Query: 168 RYTNSPYVKGARFYVTVG---RNQLA 190 + A+ + QLA Sbjct: 105 IDPGNK---DAKLKLVECEKIVRQLA 127 >gi|332260274|ref|XP_003279212.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1 [Nomascus leucogenys] Length = 823 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 428 QKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 487 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 488 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 540 Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157 ++ + +N V Y + Y Q++ +P D + Sbjct: 541 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 600 Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196 QY + ++ + + A Y + + ++ + Sbjct: 601 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 660 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + + G Y A+ ++ + + E + LV L L D A+E ++ Sbjct: 661 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYAIKLKR 715 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KAV +L+++++++A E + + V + + + Y + QA+S Sbjct: 420 NKAVTYLRQKDYNQAVEILKMLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 477 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 478 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 533 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y Sbjct: 534 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 569 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AI V++ +++L E Y +A + Sbjct: 570 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 608 >gi|58580794|ref|YP_199810.1| hypothetical protein XOO1171 [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425388|gb|AAW74425.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 607 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 9/111 (8%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 ++ + VC L + + D L D Q+ + + V ++ +F+ A + Sbjct: 326 FRRRAVVAVLAMVCVLPFAQPARAADGTLWQRADQLQQQRL-DAGVQAYRKGDFAAAQKA 384 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 F + L G+Y A + + Q+P ++ Sbjct: 385 FEAVP--------TDEGLYNLGNALARQGQYDAAIDAYDRALKQHPNQQDA 427 >gi|26449774|dbj|BAC42010.1| unknown protein [Arabidopsis thaliana] gi|29029044|gb|AAO64901.1| At4g37460 [Arabidopsis thaliana] Length = 883 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 40/191 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + + E N++KA F++ +P ++L+ + + A + Sbjct: 302 SRGIAQVNEGNYTKAISIFDKVLKEEPTYP------EALIGRGTAYAFQRELESAIADFT 355 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + I P + G + A + V ++ +++ + NSP V Sbjct: 356 KAIQSNPA---ASEAWKRRGQARAALGEYV--------EAVEDLTKALVFEPNSPDVL-- 402 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 E I + K ++ AA+ + L D + A L A+ Sbjct: 403 -------------HERGIVNF--KSKDFTAAVKDLSICLKQEKDNKSAY---TYLGLAFA 444 Query: 239 ALALMDEAREV 249 +L +A E Sbjct: 445 SLGEYKKAEEA 455 >gi|225010245|ref|ZP_03700717.1| TPR repeat-containing protein [Flavobacteria bacterium MS024-3C] gi|225005724|gb|EEG43674.1| TPR repeat-containing protein [Flavobacteria bacterium MS024-3C] Length = 304 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 48/167 (28%), Gaps = 25/167 (14%) Query: 8 AICIFEAWAYQLYKFALTIFFSIAV------CFLVGWERQSSRDVYLDSVTDVRYQREVY 61 + W + F L F +A L G ++ V + + Sbjct: 19 TLKAHTNWLVFFWLFTLVTMFPVAAQNDTQNSLLKGTTEKNQEVKNEGIVNKYSQETAFF 78 Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 A E NF A +Y+ + + + V Y + E+ + Sbjct: 79 NAATQAYNESNFQLAIDYYEKIIAA---GYHSAELYYNLGNVYYKQNDIASSIYYFEKSL 135 Query: 122 TQYPES----KNVDYVYYL------------VGMSYAQMIRDVPYDQ 152 P KN+ + + +G +Y ++I+ DQ Sbjct: 136 LLNPNDQEVIKNLGFAQKMTIDAIPSKEVNGIGKAYLKLIKSQSEDQ 182 >gi|188578239|ref|YP_001915168.1| tetratricopeptide repeat domain protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188522691|gb|ACD60636.1| tetratricopeptide repeat domain protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 607 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 9/111 (8%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 ++ + VC L + + D L D Q+ + + V ++ +F+ A + Sbjct: 326 FRRRAVVAVLAMVCVLPFAQPARAADGTLWQRADQLQQQRL-DAGVQAYRKGDFAAAQKA 384 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 F + L G+Y A + + Q+P ++ Sbjct: 385 FEAVP--------TDEGLYNLGNALARQGQYDAAIDAYDRALKQHPNQQDA 427 >gi|4468812|emb|CAB38213.1| putative protein [Arabidopsis thaliana] gi|7270728|emb|CAB80411.1| putative protein [Arabidopsis thaliana] Length = 1013 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 40/191 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + + E N++KA F++ +P ++L+ + + A + Sbjct: 302 SRGIAQVNEGNYTKAISIFDKVLKEEPTYP------EALIGRGTAYAFQRELESAIADFT 355 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + I P + G + A + V ++ +++ + NSP V Sbjct: 356 KAIQSNPA---ASEAWKRRGQARAALGEYV--------EAVEDLTKALVFEPNSPDVL-- 402 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 E I + K ++ AA+ + L D + A L A+ Sbjct: 403 -------------HERGIVNF--KSKDFTAAVKDLSICLKQEKDNKSAY---TYLGLAFA 444 Query: 239 ALALMDEAREV 249 +L +A E Sbjct: 445 SLGEYKKAEEA 455 >gi|323308991|gb|EGA62221.1| Ppt1p [Saccharomyces cerevisiae FostersO] Length = 483 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 20/133 (15%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL--MSAFVQY 105 + D E + +F+KE++F KA E + D + +S+ AF + Sbjct: 4 PTAADRAKALERKNEGNVFVKEKHFLKAIEKYTEAIDLD------STQSIYFSNRAFAHF 57 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +Q A + +E I P++ Y+ +S ++ K + ++ + Sbjct: 58 KVDNFQSALNDCDEAIKLDPKNIK---AYHRRALSCMALLE--------FKKARKDLNVL 106 Query: 166 VERYTNSPYVKGA 178 ++ N P A Sbjct: 107 LKAKPNDPAATKA 119 >gi|284052246|ref|ZP_06382456.1| tetratricopeptide TPR_2 [Arthrospira platensis str. Paraca] Length = 751 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 43/152 (28%), Gaps = 28/152 (18%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + + + + +A + P + S A Y + +A ++ I+ Sbjct: 232 GKILVNQNRYEQAIYQYQILVNQNPDSQWFYGS---LADACYQNQDWLKALENYQKAISI 288 Query: 124 YPESK--------------NVDYVY--YLVGMS------YAQMIRDVPYDQRATKLMLQY 161 ++D Y ++ Y + I +V Q+ + L+ Sbjct: 289 NSNHDWFYNGLGNCLQKLGDLDQAIEAYRNAINIKNCTWYYEEIINVFMSQQKWEEALKV 348 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 ++ N A + + L E Sbjct: 349 CFESLKNDPNH---YQAYTQIKLNLKHLGRHE 377 >gi|226228223|ref|YP_002762329.1| hypothetical protein GAU_2817 [Gemmatimonas aurantiaca T-27] gi|226091414|dbj|BAH39859.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 612 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 30/104 (28%), Gaps = 21/104 (20%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQRE----VYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 + G S+ Y + ++ +Y + L + KA + F + Sbjct: 135 LTGGFGINWSKSQRGYRTEAPEPWATQDMADSLYREGRKALSGDAYRKAADIFRSIRDRY 194 Query: 88 PFAGVARKSLLMSAFVQ-----------------YSAGKYQQAA 114 P + A + AF Y +Y +AA Sbjct: 195 PKSSYAPDAPYWEAFALQRLGGEANQRAALEALAYQQREYPKAA 238 Score = 35.9 bits (82), Expect = 6.5, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 21/63 (33%), Gaps = 10/63 (15%) Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL-------AAKEVEIGRYYLKRGEY 206 A + I +RY S Y A ++ +L AA E Y +R Sbjct: 179 AYRKAADIFRSIRDRYPKSSYAPDAPYWEAFALQRLGGEANQRAALE---ALAYQQREYP 235 Query: 207 VAA 209 AA Sbjct: 236 KAA 238 >gi|83312307|ref|YP_422571.1| hypothetical protein amb3208 [Magnetospirillum magneticum AMB-1] gi|82947148|dbj|BAE52012.1| Uncharacterized protein conserved in bacteria [Magnetospirillum magneticum AMB-1] Length = 355 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 14/102 (13%), Positives = 35/102 (34%), Gaps = 13/102 (12%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 Q ++ Y N A++++ + +R ++ + F Sbjct: 247 AEQGFRSFLKTYPNHQLAGNAQYWLGDIA-------------FSQRKDFATSAKLFGEAY 293 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y A + + +L ++ L + D+A +L+ +P Sbjct: 294 KKYPKHTKAPDMLYKLGASFGHLDMKDQACRTYALLFAEHPD 335 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 34/82 (41%), Gaps = 1/82 (1%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-SAGKYQQAASLGEE 119 YE+A ++ ++ A + F + +P +A + + + + +A L E Sbjct: 232 YEEAYGLAQKGDYDGAEQGFRSFLKTYPNHQLAGNAQYWLGDIAFSQRKDFATSAKLFGE 291 Query: 120 YITQYPESKNVDYVYYLVGMSY 141 +YP+ + Y +G S+ Sbjct: 292 AYKKYPKHTKAPDMLYKLGASF 313 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 11/91 (12%), Positives = 22/91 (24%), Gaps = 7/91 (7%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A+ G Y A ++ YP + Y +G +D + Sbjct: 233 EEAYGLAQKGDYDGAEQGFRSFLKTYPNHQLAGNAQYWLGDIAFSQRKDFATSAKLFGEA 292 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 ++Y + + L Sbjct: 293 Y-------KKYPKHTKAPDMLYKLGASFGHL 316 >gi|282899251|ref|ZP_06307223.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] gi|281195859|gb|EFA70784.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] Length = 595 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 45/136 (33%), Gaps = 14/136 (10%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G ++ + D + + + Y +A + + + A F Q P+ + Sbjct: 267 SGDKQGAINDFTAAINVNPNFAKSYYNRAAIRNELGDKQGAISDFTQFLTFHPYNAL--- 323 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + + + G Q A + + I P + YY G S + D Sbjct: 324 AYYNRGILHHELGNKQGAINDFTQVIKLNPGNIR---AYYNRGASRS--------DLGDK 372 Query: 156 KLMLQYMSRIVERYTN 171 + + ++++E N Sbjct: 373 QGAISDFTKVIEINPN 388 >gi|163786705|ref|ZP_02181153.1| aerotolerance-related exported protein [Flavobacteriales bacterium ALC-1] gi|159878565|gb|EDP72621.1| aerotolerance-related exported protein [Flavobacteriales bacterium ALC-1] Length = 252 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 7/83 (8%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSA 107 SV V+E+A E +++A + + + + L Y Sbjct: 13 SVFGFSQNDTVFEEANSLYNEGKYAEAIDKYEEIL-----GLDTHSAELYFNLGNANYKL 67 Query: 108 GKYQQAASLGEEYITQYPESKNV 130 + E+ + P K++ Sbjct: 68 NNIAPSIYYYEKALQLNPTDKDI 90 >gi|332260276|ref|XP_003279213.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2 [Nomascus leucogenys] Length = 832 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 437 QKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 496 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 497 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 549 Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157 ++ + +N V Y + Y Q++ +P D + Sbjct: 550 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 609 Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196 QY + ++ + + A Y + + ++ + Sbjct: 610 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 669 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + + G Y A+ ++ + + E + LV L L D A+E ++ Sbjct: 670 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYAIKLKR 724 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KAV +L+++++++A E + + V + + + Y + QA+S Sbjct: 429 NKAVTYLRQKDYNQAVEILKMLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 486 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 487 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 542 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y Sbjct: 543 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 578 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AI V++ +++L E Y +A + Sbjct: 579 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 617 >gi|254508500|ref|ZP_05120619.1| tetratricopeptide repeat family protein [Vibrio parahaemolyticus 16] gi|219548612|gb|EED25618.1| tetratricopeptide repeat family protein [Vibrio parahaemolyticus 16] Length = 202 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 32/89 (35%), Gaps = 19/89 (21%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 LQ+ + + A G+ YL+ +Y +AI F++V Sbjct: 11 KALQHFRKALSEDPKCVRASIAL-----------------GKTYLENEDYRSAIKHFEMV 53 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDE 245 L D++ E + L + Y L DE Sbjct: 54 LE--QDSDFVSEVLPILADCYHHLGSEDE 80 >gi|254412148|ref|ZP_05025923.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] gi|196181114|gb|EDX76103.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] Length = 427 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 39/104 (37%), Gaps = 10/104 (9%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ + +A + P+ +A A + +Y+ A S ++ I Sbjct: 296 GAALIQNGEYEQAIAALERAISLDPYDSLAH---YNLAVALHRNQQYEDAISEYQQAILL 352 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 P + +Y +G++ ++ V Q A +L+ + +E Sbjct: 353 NP---KLSLAFYNLGIA----LQQVGRGQEAVSFLLEARNLFIE 389 >gi|117923617|ref|YP_864234.1| hypothetical protein Mmc1_0301 [Magnetococcus sp. MC-1] gi|117607373|gb|ABK42828.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1] Length = 911 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 71/274 (25%) Query: 50 SVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + D E + A+ K+ + KA Y + R FP ++ Y Sbjct: 301 KLADQEVTEEYFMNNALAAEKDHQYGKARGYLDAILRTFP------QTQNRELLAFYKVD 354 Query: 109 -----KYQQAASLGEEY---ITQYPESKNVDYVYYL--------------VGMSYAQMIR 146 ++++A L EE + YP Y Y ++ Sbjct: 355 LGKKMQWEKAGWLLEELTGVLNTYPNHYR--YPEYRLLQLQLMNGAHQSERALAAMNDPN 412 Query: 147 DVPYDQRATKL-------------MLQYMSRIVERYTNSPYVKGARFYVTVG-----RNQ 188 D R L+ + ++E+ ++ + A Y + RN Sbjct: 413 LPMNDARVVLEQARAEKGMGHDVEALERLYYLLEKMPDANVRERAGAYFELVDLETQRNH 472 Query: 189 LAA---------------------KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH-A 226 L + +++ Y ++ A+ + +L Y D Sbjct: 473 LEKAVKILEEIPDPEMTFLANDPDRYIQLATAYYNHNDFPKALDLYIRILDAYPDTPAVT 532 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 AM R Y + DEA+ ++ + YP Sbjct: 533 PWAMLRAAMCYRFMNKEDEAKRLLDRLGLIYPNS 566 >gi|147679195|ref|YP_001213410.1| hypothetical protein PTH_2860 [Pelotomaculum thermopropionicum SI] gi|146275292|dbj|BAF61041.1| hypothetical protein [Pelotomaculum thermopropionicum SI] Length = 196 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 53/134 (39%), Gaps = 15/134 (11%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + E A L+ N +A + + Q P ++ L A Y + KY A + +E Sbjct: 77 LMELAELYRYTGNPDRAVKTYEQVLTLDPGNS---QARLGIAVTYYFSSKYDLAIAQLQE 133 Query: 120 YITQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + P++K +Y Y++ + ++ +Q + + + P V+ A Sbjct: 134 LLRRDPDNKEAHQLYGYVLAI-----------GKKDYATAIQELEKFISLAKEGPDVEKA 182 Query: 179 RFYVTVGRNQLAAK 192 R + ++ A K Sbjct: 183 RQAINEWKSAQAGK 196 >gi|161830946|ref|YP_001596060.1| tol-pal system protein YbgF [Coxiella burnetii RSA 331] gi|30025847|gb|AAP04427.1| 34 kDa outer membrane protein [Coxiella burnetii] gi|161762813|gb|ABX78455.1| tol-pal system protein YbgF [Coxiella burnetii RSA 331] Length = 300 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + Y N YV A +++ YL++ + A FQ V Sbjct: 188 KAQASFQNYLNDYPNGSYVANAHYWLGEI--------------YLQQKDRKNAAHEFQTV 233 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + +E +A +L + +A+E ++ I++++P+ A+ ++ Sbjct: 234 RDKFPKSEKVLDAKLKLAIIDAEDGKIKQAKEELTEIKKQHPESTAAQLANIRLQ 288 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 34/125 (27%), Gaps = 45/125 (36%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A+ L ++ + KA F Y Sbjct: 174 YRQALDLLTKKQYDKAQASFQ----------------------NYLND------------ 199 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP V +Y +G Y Q Q+ K + +++ S V A+ Sbjct: 200 ---YPNGSYVANAHYWLGEIYLQ--------QKDRKNAAHEFQTVRDKFPKSEKVLDAKL 248 Query: 181 YVTVG 185 + + Sbjct: 249 KLAII 253 >gi|84622724|ref|YP_450096.1| hypothetical protein XOO_1067 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84366664|dbj|BAE67822.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 600 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 9/111 (8%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 ++ + VC L + + D L D Q+ + + V ++ +F+ A + Sbjct: 324 FRRRAVVAVLAMVCVLPFAQPARAADGTLWQRADQLQQQRL-DAGVQAYRKGDFAAAQKA 382 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 F + L G+Y A + + Q+P ++ Sbjct: 383 FEAVP--------TDEGLYNLGNALARQGQYDAAIDAYDRALKQHPNQQDA 425 >gi|215918886|ref|NP_819144.2| tol-pal system protein YbgF [Coxiella burnetii RSA 493] gi|206583771|gb|AAO89658.2| tol system periplasmic component [Coxiella burnetii RSA 493] Length = 305 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + Y N YV A +++ YL++ + A FQ V Sbjct: 193 KAQASFQNYLNDYPNGSYVANAHYWLGEI--------------YLQQKDRKNAAHEFQTV 238 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + +E +A +L + +A+E ++ I++++P+ A+ ++ Sbjct: 239 RDKFPKSEKVLDAKLKLAIIDAEDGKIKQAKEELTEIKKQHPESTAAQLANIRLQ 293 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 34/125 (27%), Gaps = 45/125 (36%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A+ L ++ + KA F Y Sbjct: 179 YRQALDLLTKKQYDKAQASFQ----------------------NYLND------------ 204 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP V +Y +G Y Q Q+ K + +++ S V A+ Sbjct: 205 ---YPNGSYVANAHYWLGEIYLQ--------QKDRKNAAHEFQTVRDKFPKSEKVLDAKL 253 Query: 181 YVTVG 185 + + Sbjct: 254 KLAII 258 >gi|16930360|gb|AAL31868.1| 34kDa outer membrane protein [Coxiella burnetii] Length = 300 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + Y N YV A +++ YL++ + A FQ V Sbjct: 188 KAQASFQNYLNDYPNGSYVANAHYWLGEI--------------YLQQKDRKNAAHEFQTV 233 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + +E +A +L + +A+E ++ I++++P+ A+ ++ Sbjct: 234 RDKFPKSEKVLDAKLKLAIIDAEDGKIKQAKEELTEIKKQHPESTAAQLANIRLQ 288 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 34/125 (27%), Gaps = 45/125 (36%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A+ L ++ + KA F Y Sbjct: 174 YRQALDLLTKKQYDKAQASFQ----------------------NYLND------------ 199 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP V +Y +G Y Q Q+ K + +++ S V A+ Sbjct: 200 ---YPNGSYVANAHYWLGEIYLQ--------QKDRKNAAHEFQTVRDKFPKSEKVLDAKL 248 Query: 181 YVTVG 185 + + Sbjct: 249 KLAII 253 >gi|323436110|ref|ZP_01050539.2| conserved hypothetical protein [Dokdonia donghaensis MED134] gi|321496425|gb|EAQ38938.2| conserved hypothetical protein [Dokdonia donghaensis MED134] Length = 465 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 86/245 (35%), Gaps = 54/245 (22%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 KA LF+ E F KA + + P + + A + +++A L E+ I Sbjct: 72 KAELFIFENKFEKAEQILTELHELEP---HNEEVFIQKANIYSKQDDHKKAIYLLEQAID 128 Query: 123 QYPESKNVDYVYYLVGM-------------SYAQMIRDVPYDQRATK------------- 156 + D VY L+GM S+ + + D A Sbjct: 129 L--TNDPAD-VYNLIGMEYLFIEDFQNAKLSFMKCLEVDDQDYSALYNVIYCFDFLEQHT 185 Query: 157 LMLQYMSRIVERYTNSPYVKGA-----RFY--VTVGRNQLAAKEVEIG---RY---YLKR 203 + Y++ + N+PY + A + Y + L+A + I R+ YL++ Sbjct: 186 EAIDYLNMFLN---NNPYCEVAWHQVGKQYFGLKEYEKALSAYDFAIISDDRFVGAYLEK 242 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEE----AMARLVEAYVALALMDEAREVVSLIQERYP- 258 G+ + + R+ L NY E+ A+ R+ + Y L + A + P Sbjct: 243 GKVLEKLGRYNEALENYQITLELEDPTSFALLRMGKCYDKLGSDELAIKHFERCVHEDPL 302 Query: 259 -QGYW 262 W Sbjct: 303 LDNGW 307 >gi|260753789|ref|YP_003226682.1| hypothetical protein Za10_1560 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553152|gb|ACV76098.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 356 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 39/89 (43%), Gaps = 7/89 (7%) Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 P + A + L + + ++ +Y +A ++ + +I++YP Y L+G +Y D Sbjct: 223 PNSDPAEQVYL-AGYKLWNDKRYPEAETVLKSFISKYPSHSRASYARNLLGRAYL----D 277 Query: 148 VPYDQRATKLMLQYMSRIVE--RYTNSPY 174 +A ++ I + R +S Y Sbjct: 278 SGEPAQAAEIFYSNYQSIPQGARAPDSLY 306 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 39/123 (31%), Gaps = 12/123 (9%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + +VY ++ + +A +P A + + +G+ Sbjct: 223 PNSDPAEQVYLAGYKLWNDKRYPEAETVLKSFISKYPSHSRASYARNLLGRAYLDSGEPA 282 Query: 112 QAASLGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 QA E + + Y P+ Y +G S + P D + + +++ Sbjct: 283 QA---AEIFYSNYQSIPQGARAPDSLYFLGQSLMALKPARPKD------ACKVYAELLDV 333 Query: 169 YTN 171 Y N Sbjct: 334 YGN 336 >gi|254805220|ref|YP_003083441.1| hypothetical protein NMO_1272 [Neisseria meningitidis alpha14] gi|254668762|emb|CBA06648.1| conserved hypothetical protein [Neisseria meningitidis alpha14] gi|254672437|emb|CBA05813.1| conserved hypothetical protein [Neisseria meningitidis alpha275] Length = 237 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S V + +Y +A+ K FS A +A++S+ + + G Sbjct: 111 SAHTVETAQNLYNQALKHYKSGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 169 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168 + +G Y ++ +S + +G + +D+ +++ Sbjct: 170 CESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIAR---------ATWRSLIQA 220 Query: 169 YTNSP 173 Y +SP Sbjct: 221 YPSSP 225 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 7/52 (13%) Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 RF+ D+ A EAM ++ E L D AR + + YP Sbjct: 181 ANRFK-------DSPTAPEAMFKIGECQYRLQQKDIARATWRSLIQAYPSSP 225 >gi|17229979|ref|NP_486527.1| hypothetical protein all2487 [Nostoc sp. PCC 7120] gi|17131579|dbj|BAB74186.1| all2487 [Nostoc sp. PCC 7120] Length = 224 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 44/126 (34%), Gaps = 11/126 (8%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 Y+ F L++ + Q+ V + +++ + E + +++ Sbjct: 1 MYKHISFVLSVLLLGGGAATIPSIAQAQVLVVQANNAELKR---LLEDGKRLVDAGDYNG 57 Query: 76 AYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A + Q +R P R + + ++ G +Q A + I P + + Y Sbjct: 58 AIAVYQQAARMEP-----RNARIHSGIGYLHAKQGNFQAALAAYRRAIAINPNNSDFFYA 112 Query: 134 Y-YLVG 138 Y+ G Sbjct: 113 VGYIKG 118 >gi|320101816|ref|YP_004177407.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644] gi|319749098|gb|ADV60858.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644] Length = 923 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 40/128 (31%), Gaps = 16/128 (12%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + + + + F KA +++ R P +A L + + G +++ Sbjct: 615 DPKDVSALVNRGFTYRLRGEFEKAIRDYDEAIRLAPDHALAH---LNRGYAFSAQGDHER 671 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN- 171 A + I P + YY G ++ + + ++ + Sbjct: 672 AIADFTRSIELEPRNPA---AYYNRGFAWTCL--------GQFARSIPDFTQAIALDPED 720 Query: 172 -SPYVKGA 178 S Y A Sbjct: 721 GSAYANRA 728 Score = 38.9 bits (90), Expect = 0.84, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 59/188 (31%), Gaps = 42/188 (22%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYE---YFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D R ++A+ + +F +A + S P + L + + G Sbjct: 513 DPREPEGFRKRALAYRLMGDFEQAIRDGSTLIELSPRDPT------AYLQRGYSYHQIGD 566 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y +A + + I P + Y+ G++ + +Q + ++E Sbjct: 567 YDRAIADYSKAIRLDPGETSG---YFNRGLAL--------RARGMELEAIQDYTSVLEID 615 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 V+ N+ G Y RGE+ AI + + D A Sbjct: 616 P---------KDVSALVNR--------GFTYRLRGEFEKAIRDYDEAIRLAPD-----HA 653 Query: 230 MARLVEAY 237 +A L Y Sbjct: 654 LAHLNRGY 661 >gi|319784523|ref|YP_004143999.1| sulfotransferase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170411|gb|ADV13949.1| sulfotransferase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 555 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 32/154 (20%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A +LL A+ A + +A L + + P Y++G + YD Sbjct: 39 ADDALLEQAYQFQQAKRLNEAQDLCLRVLARTPNHPL---ALYILG------TVCLGYDD 89 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 A L+Y +R + +PY + + Y+K EY AI Sbjct: 90 EA---ALRYFARAIGEEPKNPY-----------------YHLGLASAYVKVSEYSPAIEH 129 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 Q L EA+ L +AY+ D A Sbjct: 130 MQYALELQPG---LIEALCALGDAYIQFDKPDMA 160 >gi|225850059|ref|YP_002730293.1| tetratricopeptide repeat domain protein [Persephonella marina EX-H1] gi|225646356|gb|ACO04542.1| tetratricopeptide repeat domain protein [Persephonella marina EX-H1] Length = 559 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 92/247 (37%), Gaps = 26/247 (10%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQC 83 T+ + + + + + ++YL + E+ E+ A ++ + + KA + N+ Sbjct: 301 TVLSILGMAYESAQRYKKAEEIYLKVLKLEPENSEILERLAEVYTRTGQYEKALDVLNRL 360 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 P + LL+ A ++ G A S +E + + + Y+ G+ Y + Sbjct: 361 YSLDP-RDY--RVLLIMADIENKRGNLDAALSYIQEAKSINDKDPTI---YFFEGI-YYE 413 Query: 144 MIRDVPYDQRATKLMLQ---YMSRIVERYTNS--PYVKGARFYVTVGRNQL------AAK 192 + + A K L+ + Y S + + + R L AA Sbjct: 414 KLDQWDKAEEAFKKALELRPDFPDALNYYGYSLIIRNRDIDRAMDMIRKALELVPDSAAY 473 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA----RE 248 +G Y K+GEY+ A+ + D E L E AL +EA R+ Sbjct: 474 LDSLGWGYFKKGEYLKALKYIKQAYQKAPDDPVVTE---HLAEVEEALGNKEEALKLYRK 530 Query: 249 VVSLIQE 255 + +I++ Sbjct: 531 ALEIIEK 537 >gi|149916591|ref|ZP_01905105.1| TPR domain protein [Roseobacter sp. AzwK-3b] gi|149809518|gb|EDM69378.1| TPR domain protein [Roseobacter sp. AzwK-3b] Length = 156 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 14/124 (11%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + ++ L+ + + A E+F + P A M + G Y A + E Sbjct: 39 LLKRGRNALEAGDSAAAIEHFTALTDHAP--DFAE-GWHMRSVAYSRVGLYGPALADIER 95 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 ++ P N Y +G+ ++ + +L + SR++ + + V A Sbjct: 96 ALSINPRHFN---AIYGLGIILEEVNK--------PELAHEAFSRVLAIHPHHEAVTEAM 144 Query: 180 FYVT 183 + Sbjct: 145 ERLD 148 >gi|260467068|ref|ZP_05813248.1| tol-pal system protein YbgF [Mesorhizobium opportunistum WSM2075] gi|259029177|gb|EEW30473.1| tol-pal system protein YbgF [Mesorhizobium opportunistum WSM2075] Length = 368 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 22/148 (14%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 A + S + ++ E+Y + F+ ++ A + F FP Sbjct: 218 APATGAPAKAGKSDGTVVAALPATNDPEELYRNSYQFILSGDYGTAEQGFRDHISRFP-- 275 Query: 91 GVARKSLLMSAFVQYSAGKYQQA----ASLGEEYI---TQYPESKNVDYVYYLVGMSYAQ 143 R + +A Y G+ E ++ YP++K + +G+S Sbjct: 276 ---RDAK--TADAHYWLGESLLGQQKFRDAAEVFLAASKDYPKAKKAPDMLLKLGVSL-- 328 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTN 171 V Q I +RY + Sbjct: 329 ----VGLKQHDV--ACATFGEIGKRYPD 350 >gi|157821925|ref|NP_001100736.1| intraflagellar transport protein 88 homolog [Rattus norvegicus] gi|149064079|gb|EDM14349.1| intraflagellar transport 88 homolog (Chlamydomonas) (predicted) [Rattus norvegicus] Length = 815 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 76/240 (31%), Gaps = 40/240 (16%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99 Q+S L +D + K ++ KA E++ D + +L Sbjct: 469 QASSYADLAVSSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYN 524 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + +A + ++ + +N V + Y +++ D + Sbjct: 525 IGLTYKKLNRLDEAL---DSFLKLHAILRNSAQVLCQIANVY-ELMEDPN-------QAI 573 Query: 160 QYMSRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVL 217 +++ +++ +S A + + K + +YY + Y + I + + Sbjct: 574 EWLMQLISVVPTDSQ----ALSKLGELYDSEGDKS-QAFQYYYESYRYFPSNIEVIEWLG 628 Query: 218 ANYSDAEHAEEAMARLVEA-----------------YVALALMDEAREVVSLIQERYPQG 260 A Y D + E+A+ A + +A + I ++P+ Sbjct: 629 AYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPEN 688 Score = 35.9 bits (82), Expect = 6.3, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 75/233 (32%), Gaps = 67/233 (28%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KA+ +L++++F++A + + + V + +F+ Y ++ QA+S Sbjct: 421 NKAITYLRQKDFNQAVDTLKMFEKKD--SRVKSAAATNLSFLYYLENEFAQASSYADLAV 478 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 479 SSDRY---NPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNR- 534 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y + Sbjct: 535 -------LDEALDSFLKLHAILRNS-----------------AQVLCQIANVYELMEDPN 570 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 AI + ++ S +A+++L E Y + +A + +P Sbjct: 571 QAI---EWLMQLISVVPTDSQALSKLGELYDSEGDKSQAFQYYYESYRYFPSN 620 >gi|332375548|gb|AEE62915.1| unknown [Dendroctonus ponderosae] Length = 490 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 57/178 (32%), Gaps = 33/178 (18%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKS 96 ++D S DV +A + K+Q+++ A E + + P + +S Sbjct: 1 MSTDTKDTPSVSPEDVELAETFKNEANEYFKKQSYNAAIELYTKAIEQNPNVPVYYSNRS 60 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRA 154 F + A + + I P YV +Y ++ + Sbjct: 61 -----FAYLKTECFGYALNDATKSIELDPT-----YVKGFYRRADAHMSI--------GK 102 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVG---RNQLA-AKEVEIGRYYLKRGEYVA 208 KL + + + N A+ + +LA K + + + +++A Sbjct: 103 WKLAQKDYEYVTKVRPNDK---DAKLKLNECSKVVKKLAFEKAISVED----KKKFIA 153 >gi|222099856|ref|YP_002534424.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga neapolitana DSM 4359] gi|221572245|gb|ACM23057.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga neapolitana DSM 4359] Length = 367 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 83/226 (36%), Gaps = 43/226 (19%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 K L +++ + +Y ++ P ++ Y+ G Y++A E + Sbjct: 147 KGSLLVEQGKIEEGIKYLDKAVEIDP---WLVQAYASLGEAYYNLGDYEKAVHYWERELE 203 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 P+ K Y+++ +Y +M R L + + R++ER ++ A + + Sbjct: 204 YAPDDKLT---YFVLAEAYQEMNRK--------DLAARTLERLLERDPSNI---PALYQL 249 Query: 183 TVGRNQLA---------AKEVEI-----------GRYYLKRGEYVAAIPRFQLVLANYSD 222 + L + ++I + LK G+Y + ++ Sbjct: 250 SELYRALGKEEKAKEMEERIMKIRPAYPTEIEPWAKVMLKHGKYREVAEELERIVE---T 306 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + A LV YV + +D+A+E++ +++ W Y + Sbjct: 307 SPLNTLAKLLLVVPYVKMGKIDKAKELLEDLEQT---NIWYYYGKK 349 >gi|212712431|ref|ZP_03320559.1| hypothetical protein PROVALCAL_03525 [Providencia alcalifaciens DSM 30120] gi|212684888|gb|EEB44416.1| hypothetical protein PROVALCAL_03525 [Providencia alcalifaciens DSM 30120] Length = 260 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 39/112 (34%), Gaps = 14/112 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + ++ Y S Y A +++ +G A F V Sbjct: 158 EAIGALQGFIKTYPKSGYQSNANYWLGQLN--------------YNKGSKDDAAFYFATV 203 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + Y ++ + EA+ ++ D+A+ V + ++YP A+ E Sbjct: 204 VKQYPKSQKSSEALFKVGLIMQDKGQKDKAKAVYQQVLQQYPNSAGAKLAEK 255 Score = 42.8 bits (100), Expect = 0.049, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 51/141 (36%), Gaps = 12/141 (8%) Query: 49 DSVTDVRYQREVYEKAVL-FLKEQ---NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + +++ Y AV ++ + +A + +P +G + + Sbjct: 128 PAASSGGNEKDDYNAAVKLAMESKSKAQIDEAIGALQGFIKTYPKSGYQSNANYWLGQLN 187 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y+ G AA + QYP+S+ + VG+ + D+ + Sbjct: 188 YNKGSKDDAAFYFATVVKQYPKSQKSSEALFKVGL--------IMQDKGQKDKAKAVYQQ 239 Query: 165 IVERYTNSPYVKGARFYVTVG 185 ++++Y NS K A ++ Sbjct: 240 VLQQYPNSAGAKLAEKKLSTL 260 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 34/113 (30%), Gaps = 22/113 (19%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +A + +I YP+S Y +G + Y + +V++Y Sbjct: 157 DEAIGALQGFIKTYPKSGYQSNANYWLGQLNYNK--------GSKDDAAFYFATVVKQYP 208 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 S A F V + K+ Y Q VL Y ++ Sbjct: 209 KSQKSSEALFKVGLIMQDKGQKDKAKAVY--------------QQVLQQYPNS 247 >gi|126658742|ref|ZP_01729887.1| O-linked GlcNAc transferase [Cyanothece sp. CCY0110] gi|126620004|gb|EAZ90728.1| O-linked GlcNAc transferase [Cyanothece sp. CCY0110] Length = 277 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 72/220 (32%), Gaps = 41/220 (18%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQ 104 LD D Y +Y + V + +++ +A E FN +P K+L Sbjct: 18 VLDDKEDTSYLA-LYHRGVTLFESESYKEALEIFNTLLETYPNEERIWFSKAL-----TL 71 Query: 105 YSAGKYQQAASLGEEYITQYPESKNV----DYVY-----YLVG-MSYAQMIR-DVPYDQR 153 Y Y+++ + + P + Y Y +SY + + + D+ Sbjct: 72 YELENYEESILAYDALLNINPIHEEAWNNRGYALSLLRRYREAILSYNKALEINPNCDKA 131 Query: 154 ATKLMLQY-----MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 + L Y + V Y S YV+ N+ ++ L+ Y Sbjct: 132 LFNMALAYHHLSNYQKAVNCY--SRYVEMIPDVGAAWNNR--GYDL------LRLKRYHE 181 Query: 209 AIPRFQLVLANYSDA--EHAEEAMARLVEAYVALALMDEA 246 AI + + ++ +A+A L +EA Sbjct: 182 AILSYNKAIELIPNSHEPFLNKALAL-----HFLGKHEEA 216 >gi|308271574|emb|CBX28182.1| hypothetical protein N47_G35060 [uncultured Desulfobacterium sp.] Length = 490 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 61/183 (33%), Gaps = 23/183 (12%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++ D D Q Y+ A++ + + S A YF + + PF L V Sbjct: 307 KEDVTDKPKDYMSQ---YKYALVLSESGDRSDAIAYFKKALEENPFDP---DILRDLGKV 360 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + G+Y +A E ++ P+ + + I+ + Sbjct: 361 YFQDGQYPEAQKTLEGAVSLAPDDPET--------LLFLGRIKAET---GKFNDARKLFL 409 Query: 164 RIVERYTNSPYVKGARFYVTVG---RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 I E+Y Y K A + + N +A +G +Y + + A + L Sbjct: 410 TITEKYP---YYKRALYLLGETCGKMNNMADAHYYLGLFYKDKEDLKNARFHLEKALEKT 466 Query: 221 SDA 223 +D Sbjct: 467 NDT 469 >gi|251770989|gb|EES51573.1| protein of unknown function [Leptospirillum ferrodiazotrophum] Length = 261 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 65/199 (32%), Gaps = 51/199 (25%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDV-YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 FA TI F + V + + S + D+ ++Y + +A + Sbjct: 50 FAGTILFILLVGTGIVYHIHSKKVARESDAAALETKAEQLYSRGQQS-NGPELVEAKKLL 108 Query: 81 NQCSRDFPFAGVARKSLLMSAFV--------------------------------QYS-- 106 Q +P AR + L A + Y Sbjct: 109 EQVMSTYPDTPSARVAPLFLASIINIQTPQDSSKAIEWLHRGLDLNAGNMKLLPFYYESM 168 Query: 107 ------AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A +Y QA ++ ++ +T++P D Y +G +Y + + T L + Sbjct: 169 GLTMMSAHQYDQAIAMFQK-VTEFPGKILADAALYNIGKTYEILNQ--------TALAII 219 Query: 161 YMSRIVERYTNSPYVKGAR 179 ++V+ + +SP+ + Sbjct: 220 NYKKLVKEFPSSPWAAESE 238 Score = 43.2 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 45/140 (32%), Gaps = 27/140 (19%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA-------------AKEVEIGR----- 198 + + +++ Y ++P + A ++ N ++ G Sbjct: 103 EAKKLLEQVMSTYPDTPSARVAPLFLASIINIQTPQDSSKAIEWLHRGLDLNAGNMKLLP 162 Query: 199 YYLKR--------GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 +Y + +Y AI FQ V + A+ A+ + + Y L A Sbjct: 163 FYYESMGLTMMSAHQYDQAIAMFQKVTE-FPGKILADAALYNIGKTYEILNQTALAIINY 221 Query: 251 SLIQERYPQGYWARYVETLV 270 + + +P WA E + Sbjct: 222 KKLVKEFPSSPWAAESEPFL 241 >gi|240128293|ref|ZP_04740954.1| hypothetical protein NgonS_06586 [Neisseria gonorrhoeae SK-93-1035] gi|268686690|ref|ZP_06153552.1| periplasmic protein [Neisseria gonorrhoeae SK-93-1035] gi|268626974|gb|EEZ59374.1| periplasmic protein [Neisseria gonorrhoeae SK-93-1035] Length = 237 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S V + +Y +A+ + FS A +A++S+ + + G Sbjct: 111 SAHTVETAQNLYNQALKHYQNGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 169 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168 + +G Y ++ +S V + +G + +D+ +++ Sbjct: 170 CESVIEIGGRYANRFKDSPTAPEVVFKIGECQYRLQQKDIAR---------ATWRSLIQT 220 Query: 169 YTNSP 173 Y SP Sbjct: 221 YPGSP 225 >gi|84516837|ref|ZP_01004195.1| TPR domain protein [Loktanella vestfoldensis SKA53] gi|84509305|gb|EAQ05764.1| TPR domain protein [Loktanella vestfoldensis SKA53] Length = 174 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 4/78 (5%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D+ Q + ++ + ++ + +A + N PF A AF + Sbjct: 60 EAPDMPSQMML-DEGLRAMRGGDLIRAVDRLNALVSYCPF--YAE-GYNQRAFANFLRED 115 Query: 110 YQQAASLGEEYITQYPES 127 YQ A ++ I+ P Sbjct: 116 YQAALPDLDQAISLNPRH 133 >gi|95929293|ref|ZP_01312037.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684] gi|95134791|gb|EAT16446.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684] Length = 576 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 87/278 (31%), Gaps = 64/278 (23%) Query: 7 RAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAV 65 R +F W + +F L + + + S + R Q + Y A Sbjct: 4 RGNTLFSFWRFVPGRFFLIGSLLLLMMTACSLPPKPSPLSVEEQQRYQRAQAYLAYADAR 63 Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGV--------------ARKSL-------------- 97 L L + + A E + + +++ Sbjct: 64 LHLIDGDVDAAIEALQRAVTFDDQSPYLFAVLASIHLDRGQTQQAQDYLNQALVLEPHHL 123 Query: 98 ---LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 LM A V ++ GK QA + + ++P+ ++V YL I + +A Sbjct: 124 ASELMLADVYHAQGKTDQAIQAFRQVLDRHPDIEDV----YLH-------ISRLYLSLQA 172 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 Q + + ++R S + L +E+ Y RG+Y AI ++ Sbjct: 173 YDKAEQILLQWLKRQPQS-------------VDGL----MELANLYRLRGDYQQAITTYR 215 Query: 215 LVLANYSDAEHAEEAMARLVEAY----VALALMDEARE 248 + + RL+E AL L DEA Sbjct: 216 QAIELTPHDRRIYLPLGRLLEQQRQFDEALTLYDEAAR 253 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 59/169 (34%), Gaps = 22/169 (13%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ--- 160 + +Y A S+ + I ++P VD +YY G+ ++ ++ + L Sbjct: 405 YQRSQRYDDALSVLDRGIQRHP---KVDDLYYSQGVI-FELRGLRDRTEQLMRETLTLNP 460 Query: 161 ----YMSRIVERYTNS-PYVKGARFYVTVGRNQLAAKEV---EIGRYYLKRGEYVAAIPR 212 ++ + Y S ++ A QLA +G Y + G+Y A Sbjct: 461 QHVGALNHLAYIYAESGEHLDEALEMARKA-AQLAPHAAVLDTLGWVYYQLGDYEQAREP 519 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL---IQERYP 258 + + + + L + Y L L EA+ + +Q P Sbjct: 520 LEQAVKK---SPEDVLILEHLADLYRKLLLTQEAQRIYRKALELQPNLP 565 >gi|328952032|ref|YP_004369366.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca acetoxidans DSM 11109] gi|328452356|gb|AEB08185.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca acetoxidans DSM 11109] Length = 599 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 27/250 (10%), Positives = 72/250 (28%), Gaps = 43/250 (17%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRD------VYLDSVTDVRYQREVYE---KAVLFLK 69 + F + + G + D ++ +E Y+ A +L Sbjct: 22 IQSFKCLLLILATALVMSGCQSLPPADSARIPGKIDRLPPTIQSPKEAYKHYLNAQYYLF 81 Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 N A + + P + + + A + G ++A + E+ I+ P Sbjct: 82 TGNLEDALRSYEAAIQCDPKSA---QLEIEMAALLIRKGDIKEALAHLEKAISLDPNHLE 138 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 Q++ + + +I+ + Sbjct: 139 A-----------HQLLAGLHTGMNQLREATTEYEKIITLDPANEEAV------------- 174 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 + + + ++G A+ + ++ D + A+ L + Y+ L + A++ Sbjct: 175 ----IFLATLHAQQGNCAKAVNLLKNLIKKNPD-QFI--ALFYLGKCYIELGQLTAAKKE 227 Query: 250 VSLIQERYPQ 259 + P+ Sbjct: 228 FQQALHKQPE 237 >gi|212212959|ref|YP_002303895.1| tetratricopeptide repeat family protein [Coxiella burnetii CbuG_Q212] gi|212011369|gb|ACJ18750.1| tetratricopeptide repeat family protein [Coxiella burnetii CbuG_Q212] Length = 561 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 49/182 (26%), Gaps = 49/182 (26%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A +++ +FSKA Y+ + P + ++Q+A + Sbjct: 179 AHVYMYLGDFSKAITYYEKRLALEPENA---DAQYDCGLAHLKDNQFQKAIDYFTNALLL 235 Query: 124 YPESKNVDY----VYYLVG------MSYAQMIRDVPYD------------QRATKLMLQY 161 PE + Y Y G + Y + + P Q + + Y Sbjct: 236 NPEHPDCHYSLATAYLQRGDHKEALLHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDY 295 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + + N + I YLK I + + + +Y Sbjct: 296 FKQALILDPNYREA-----------------HLNIAAVYLK-------INQIKQAIEHYE 331 Query: 222 DA 223 Sbjct: 332 ST 333 >gi|154299087|ref|XP_001549964.1| hypothetical protein BC1G_11856 [Botryotinia fuckeliana B05.10] gi|150857559|gb|EDN32751.1| hypothetical protein BC1G_11856 [Botryotinia fuckeliana B05.10] Length = 585 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 38/122 (31%), Gaps = 13/122 (10%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ ++++ + KA E + + P +A L A G + A + + + Sbjct: 61 QEGNDAMEKKQYWKAIENYTAALKCSPSVHLAEIIRLNRALAHLRNGDFDAALTDTKCMV 120 Query: 122 TQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + ++ Y G + + R ++ ++ N+ Sbjct: 121 SL----EDAPEKALYRAGQALYGLERFSEC--------HDIFEQLCAKFPNNAAATTGLK 168 Query: 181 YV 182 V Sbjct: 169 RV 170 >gi|1679748|gb|AAB62979.1| Tgl protein [Myxococcus xanthus] Length = 241 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 9/67 (13%), Positives = 22/67 (32%), Gaps = 5/67 (7%) Query: 62 EKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 A + L + + A + + +P + + + Y G+ +A + Sbjct: 106 NLANVHLDQGRYDDAIKLYELVLNDMLYPTPFI---AQGNLGWAYYKKGEPDRAVESIKA 162 Query: 120 YITQYPE 126 +T P Sbjct: 163 AVTTNPN 169 >gi|218768443|ref|YP_002342955.1| putative periplasmic protein [Neisseria meningitidis Z2491] gi|121052451|emb|CAM08787.1| putative periplasmic protein [Neisseria meningitidis Z2491] gi|319410687|emb|CBY91066.1| conserved hypothetical TPR-containing periplasmic protein [Neisseria meningitidis WUE 2594] Length = 238 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 42/125 (33%), Gaps = 11/125 (8%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S V + +Y +A+ K FS A +A++S+ + + G Sbjct: 112 SAHTVETAQNLYNQALKHYKSGRFSAAASLLKGADGGD-GGSIAQRSMYLLLQSRARMGN 170 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168 + +G Y ++ +S + +G + +D+ +++ Sbjct: 171 CESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIAR---------ATWRSLIQT 221 Query: 169 YTNSP 173 Y SP Sbjct: 222 YPGSP 226 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 18/43 (41%) Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + D+ A EAM ++ E L D AR + + YP Sbjct: 184 RFKDSPTAPEAMFKIGECQYRLQQKDIARATWRSLIQTYPGSP 226 >gi|212213379|ref|YP_002304315.1| Tol system periplasmic component [Coxiella burnetii CbuG_Q212] gi|212011789|gb|ACJ19170.1| Tol system periplasmic component [Coxiella burnetii CbuG_Q212] Length = 305 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + Y N YV A +++ YL++ + A FQ V Sbjct: 193 KAQASFQNYLNDYPNGSYVANAHYWLGEI--------------YLQQKDRKNAAHEFQTV 238 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + +E +A +L + +A+E ++ I++++P+ A+ ++ Sbjct: 239 RDKFPKSEKVLDAKLKLAIIDAEDGKIKQAKEELTEIKKQHPESTAAQLANIRLQ 293 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 34/125 (27%), Gaps = 45/125 (36%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A+ L ++ + KA F Y Sbjct: 179 YRQALDLLTKKQYDKAQASFQ----------------------NYLND------------ 204 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP V +Y +G Y Q Q+ K + +++ S V A+ Sbjct: 205 ---YPNGSYVANAHYWLGEIYLQ--------QKDRKNAAHEFQTVRDKFPKSEKVLDAKL 253 Query: 181 YVTVG 185 + + Sbjct: 254 KLAII 258 >gi|209364238|ref|YP_001425324.2| tol system periplasmic component [Coxiella burnetii Dugway 5J108-111] gi|212219429|ref|YP_002306216.1| tol system periplasmic component [Coxiella burnetii CbuK_Q154] gi|207082171|gb|ABS78351.2| tol system periplasmic component [Coxiella burnetii Dugway 5J108-111] gi|212013691|gb|ACJ21071.1| tol system periplasmic component [Coxiella burnetii CbuK_Q154] Length = 305 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + Y N YV A +++ YL++ + A FQ V Sbjct: 193 KAQASFQNYLNDYPNGSYVANAHYWLGEI--------------YLQQKDRKNAAHEFQTV 238 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + +E +A +L + +A+E ++ I++++P+ A+ ++ Sbjct: 239 RDKFPKSEKVLDAKLKLAIIDAEDGKIKQAKEELTEIKKQHPESTAAQLANIRLQ 293 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 34/125 (27%), Gaps = 45/125 (36%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A+ L ++ + KA F Y Sbjct: 179 YRQALDLLTKKQYDKAQASFQ----------------------NYLND------------ 204 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP V +Y +G Y Q Q+ K + +++ S V A+ Sbjct: 205 ---YPNGSYVANAHYWLGEIYLQ--------QKDRKNAAHEFQTVRDKFPKSEKVLDAKL 253 Query: 181 YVTVG 185 + + Sbjct: 254 KLAII 258 >gi|164685794|ref|ZP_01945909.2| tol-pal system protein YbgF [Coxiella burnetii 'MSU Goat Q177'] gi|165918370|ref|ZP_02218456.1| tol-pal system protein YbgF [Coxiella burnetii RSA 334] gi|164601308|gb|EAX33415.2| tol-pal system protein YbgF [Coxiella burnetii 'MSU Goat Q177'] gi|165917876|gb|EDR36480.1| tol-pal system protein YbgF [Coxiella burnetii RSA 334] Length = 300 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + Y N YV A +++ YL++ + A FQ V Sbjct: 188 KAQASFQNYLNDYPNGSYVANAHYWLGEI--------------YLQQKDRKNAAHEFQTV 233 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + +E +A +L + +A+E ++ I++++P+ A+ ++ Sbjct: 234 RDKFPKSEKVLDAKLKLAIIDAEDGKIKQAKEELTEIKKQHPESTAAQLANIRLQ 288 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 34/125 (27%), Gaps = 45/125 (36%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A+ L ++ + KA F Y Sbjct: 174 YRQALDLLTKKQYDKAQASFQ----------------------NYLND------------ 199 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP V +Y +G Y Q Q+ K + +++ S V A+ Sbjct: 200 ---YPNGSYVANAHYWLGEIYLQ--------QKDRKNAAHEFQTVRDKFPKSEKVLDAKL 248 Query: 181 YVTVG 185 + + Sbjct: 249 KLAII 253 >gi|90417118|ref|ZP_01225046.1| hypothetical protein GB2207_00415 [marine gamma proteobacterium HTCC2207] gi|90331134|gb|EAS46390.1| hypothetical protein GB2207_00415 [marine gamma proteobacterium HTCC2207] Length = 299 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 14/111 (12%) Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 ++ +R Q + V Y SPY A +++ E+ Sbjct: 182 NYAQASNLLLKERDINAAAQAFKQHVIDYPASPYTANAHYWLGEIYLLQGQDEM------ 235 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 A F LV+ + A +A +L + Y L +D ARE++ Sbjct: 236 --------ARQAFTLVVEQHPKHSKAMDATFKLGKIYHQLGEIDRARELLE 278 Score = 37.8 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 30/66 (45%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 LK + AA F+ + +Y + + A L E Y+ + AR+ +L+ E++P+ Sbjct: 191 LKERDINAAAQAFKQHVIDYPASPYTANAHYWLGEIYLLQGQDEMARQAFTLVVEQHPKH 250 Query: 261 YWARYV 266 A Sbjct: 251 SKAMDA 256 >gi|19705141|ref|NP_602636.1| TPR repeat-containing protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19713076|gb|AAL93935.1| Tetratricopeptide repeat family protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 936 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 67/188 (35%), Gaps = 14/188 (7%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 +Q+ + A FL ++N A + + + + + S++ V Y+ Y + Sbjct: 123 KKTFQKTFFAVAQNFLAKENNEAAQKAYKEIIDN-KYENYKE-SMMGLGIVYYNLKDYDK 180 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A E+ + P+ +N + V YL + + T + + ++ Sbjct: 181 AIYWLSEFSKEMPK-ENKEMVSYLRASALYRK--------GNTDEAIGRFEELANVEPST 231 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN-YSDAEHAEEAMA 231 Y + A Y+ + K+ +YL R + ++ + Y E+ +A+ Sbjct: 232 EYSRKAALYLIEIYSN--RKDEAKVTFYLNRIKGTKEYNTAMTMIGDLYVTKENYNKALD 289 Query: 232 RLVEAYVA 239 ++ Sbjct: 290 YYSQSNDK 297 Score = 40.1 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 67/204 (32%), Gaps = 29/204 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K + + + +A F + + ++ K L + A +Y +A GE+Y Sbjct: 508 YLKGIAAMGLGKYDEAESEFQKVLASGDQS-LSTKVYLNRVRNYFLAERYNEAVQAGEQY 566 Query: 121 I-TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P+ + V Y L +G+SY ++ + YDQ S Y K Sbjct: 567 LSKLSPDKEKVIYSEMLDKIGLSYFRLGK---YDQAR-----------------SYYSKI 606 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A + +I Y Y A ++ V + + + E+A + + Sbjct: 607 ASMKGYEVYGK-----FQIADSYYNEKNYEKAGSLYKEVYNQFGETFYGEQAYYKYIMTL 661 Query: 238 VALALMDEAREVVSLIQERYPQGY 261 D + YP Sbjct: 662 SLTGNTDAFEREKDNFMKVYPNSN 685 >gi|108762653|ref|YP_631287.1| social gliding motility protein Tgl [Myxococcus xanthus DK 1622] gi|108466533|gb|ABF91718.1| social gliding motility protein Tgl [Myxococcus xanthus DK 1622] Length = 253 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 22/67 (32%), Gaps = 5/67 (7%) Query: 62 EKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 A + L + + A + + +P +A + Y G+ +A + Sbjct: 106 NLANVHLDQGRYDDAIKLYELVLNDMLYPTPFIA---QGNLGWAYYKKGEPDRAVESIKA 162 Query: 120 YITQYPE 126 +T P Sbjct: 163 AVTTNPN 169 >gi|326430815|gb|EGD76385.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818] Length = 809 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 71/227 (31%), Gaps = 64/227 (28%) Query: 69 KEQNFSKAYEYFNQ--------CSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + ++ +A E F + P + YS G Y +A + E Sbjct: 366 DKGDYDRAIECFEKALAIYVEMLGEKHPSTASTYN-----NLGSAYYSKGDYDKAIAFYE 420 Query: 119 EYITQ--------YPESKNVDYVYYL-VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + + +P + + YL +G++Y + Q K + + + E++ Sbjct: 421 KDLAITVETLGEKHPGTADS----YLGLGVAYYSKSENDEAIQLYEKALAIKVETLGEKH 476 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL--------ANYS 221 ++ N L G Y +GEY AI ++ L + Sbjct: 477 PST----------AETYNNL-------GNTYYSKGEYDKAIQLYEKALAITVETLGEKHP 519 Query: 222 DAEHAEEAMARLVEAYVALALMDEA----REVVSL----IQERYPQG 260 L AY D+A + +++ + E++P Sbjct: 520 STADTY---NNLGNAYSDKGEYDKAIVFYEKALAIKVETLGEKHPST 563 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 32/235 (13%), Positives = 62/235 (26%), Gaps = 63/235 (26%) Query: 61 YEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 Y + + ++ KA ++ + P S L YS + Sbjct: 399 YNNLGSAYYSKGDYDKAIAFYEKDLAITVETLGEKHPGTA---DSYLGLGVAYYSKSEND 455 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 +A Y ++ I+ ++ Y + Y+ Sbjct: 456 EAIQ------------------LYEKALA----IKVETLGEKHPSTAETYNNLGNTYYSK 493 Query: 172 SPYVKGARFY---VTVGRNQLAAKEVEIGRYYLK-------RGEYVAAIPRFQLVL---- 217 Y K + Y + + L K Y +GEY AI ++ L Sbjct: 494 GEYDKAIQLYEKALAITVETLGEKHPSTADTYNNLGNAYSDKGEYDKAIVFYEKALAIKV 553 Query: 218 ----ANYSDAEHAEEAMARLVEAYVALALMDEA----REVVSL----IQERYPQG 260 + L AY D+A +++ + E++P Sbjct: 554 ETLGEKHPSTASTH---NNLGTAYADKGDYDKAIQHHETALAIRVETLGEKHPHT 605 >gi|300120392|emb|CBK19946.2| unnamed protein product [Blastocystis hominis] Length = 429 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 44/122 (36%), Gaps = 10/122 (8%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 A F++ ++++KA + P A + + A+ Y Y++A + + Sbjct: 173 AAAFYFIQSRDYAKAINAYQMALLYHPDAPASVRV--GIAYCFYKQNNYKKAFLALDRAL 230 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P ++ ++ ++ D + ++ + I + Y +P A Y Sbjct: 231 QLDPANEE--------ALAMKAALQRTAADLSPKERVIASLQTIQQLYRVNPNHPQALNY 282 Query: 182 VT 183 + Sbjct: 283 IA 284 >gi|294656841|ref|XP_002770320.1| DEHA2D15576p [Debaryomyces hansenii CBS767] gi|199431783|emb|CAR65674.1| DEHA2D15576p [Debaryomyces hansenii] Length = 532 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 40/121 (33%), Gaps = 18/121 (14%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110 + ++ ++ +LKE ++ A + + + P + ++ + Y Sbjct: 4 NKEEAIKLKDEGNAYLKEHRYNYAIDSYTKAIELDPTNAVFYSNRAQV-----HIKLENY 58 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A S E + N+ YY G+S ++ K I+++ Sbjct: 59 GLAISDCNEALKV---DPNMMKAYYRRGISLMAILN--------YKEAQINFKEILKKMP 107 Query: 171 N 171 N Sbjct: 108 N 108 >gi|150400578|ref|YP_001324344.1| TPR repeat-containing protein [Methanococcus aeolicus Nankai-3] gi|150013281|gb|ABR55732.1| TPR repeat-containing protein [Methanococcus aeolicus Nankai-3] Length = 470 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +K + ++++ KA EY+N+ +++P+ + + Y Y +A +E Sbjct: 8 KKGNEYKDKEDYDKAIEYYNEALKNYPY-KFKWRIFINLGHCYYLKKDYDEAIKNYKE 64 >gi|194333978|ref|YP_002015838.1| TPR repeat-containing protein [Prosthecochloris aestuarii DSM 271] gi|194311796|gb|ACF46191.1| TPR repeat-containing protein [Prosthecochloris aestuarii DSM 271] Length = 205 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 42/116 (36%), Gaps = 18/116 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y+K + +E ++S A F++ P + L+ + G A + Sbjct: 56 YYKKGLRKSREGDYSAAATLFSRALDFHPGHTNAYFSRGLIRT-----RRGDNPGALADY 110 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 I YP +V VY GM +R DQ LQ ++ +E +P Sbjct: 111 SRVIELYP---DVSMVYNNRGM-----VRKKTGDQNG---ALQDFNKAIELDPANP 155 >gi|229526204|ref|ZP_04415608.1| TPR domain protein in aerotolerance operon [Vibrio cholerae bv. albensis VL426] gi|229336362|gb|EEO01380.1| TPR domain protein in aerotolerance operon [Vibrio cholerae bv. albensis VL426] Length = 632 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 14/133 (10%) Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63 +L A+C+F F+L + F +++ W S + D + E Y + Sbjct: 309 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 361 Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117 A ++ ++ A Y+ + ++ + A AG+ Q+A L Sbjct: 362 AAEAFRDPHWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY 420 Query: 118 EEYITQYPESKNV 130 E + Q P ++ Sbjct: 421 EHVLKQEPNHQDA 433 >gi|328772217|gb|EGF82256.1| hypothetical protein BATDEDRAFT_19105 [Batrachochytrium dendrobatidis JAM81] Length = 645 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 50/136 (36%), Gaps = 16/136 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y + + ++ A + ++ + P + + A +Y G Y ++ +E Sbjct: 443 YHRGQVRFLTADYQGAVDDYSASIKNESP-EESSVYVHIQMAVAKYKLGNYAESEKKFKE 501 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS--PYVKG 177 +P S V ++ D++A L+ ++ +E S PY+ Sbjct: 502 CKRLFPNSAEV-----------FNYYGEIHMDRQAHTEALKAFNKSIEMDPTSPLPYINK 550 Query: 178 ARFYVTVGRNQLAAKE 193 A Y+ ++ LA E Sbjct: 551 AILYLNWKQD-LATAE 565 >gi|323344856|ref|ZP_08085080.1| hypothetical protein HMPREF0663_11616 [Prevotella oralis ATCC 33269] gi|323094126|gb|EFZ36703.1| hypothetical protein HMPREF0663_11616 [Prevotella oralis ATCC 33269] Length = 1147 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 23/50 (46%) Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + + +Y D EH + A L Y L + A + ++++YP+ W Sbjct: 618 LRRLTESYPDYEHTDNAYYHLFLLYSRLNMPSLAESYIQKLRQQYPKSEW 667 >gi|190893273|ref|YP_001979815.1| hypothetical protein RHECIAT_CH0003699 [Rhizobium etli CIAT 652] gi|190698552|gb|ACE92637.1| hypothetical conserved protein [Rhizobium etli CIAT 652] Length = 329 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 Q ++ + Y +S A F++ +G+Y A F Sbjct: 224 AEQEFNQYIAHYPSSARAADANFWLGEAL--------------YSQGKYNEAAKTFLNAH 269 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y +E A E + +L + AL + A + + +RYP+ Sbjct: 270 QKYGSSEKAPEMLLKLGMSLAALDNKETACATLREVSKRYPKAS 313 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 42/114 (36%), Gaps = 14/114 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A + ++ A + FNQ +P + A + YS GKY +A + + Sbjct: 209 YKAAYGHVLSGDYGTAEQEFNQYIAHYPSSARAADANFWLGEALYSQGKYNEA---AKTF 265 Query: 121 ITQYP---ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + + S+ + +GMS A + + + + +RY Sbjct: 266 LNAHQKYGSSEKAPEMLLKLGMSLAALDNK--------ETACATLREVSKRYPK 311 >gi|158521141|ref|YP_001529011.1| N-acetylmuramoyl-L-alanine amidase [Desulfococcus oleovorans Hxd3] gi|158509967|gb|ABW66934.1| N-acetylmuramoyl-L-alanine amidase [Desulfococcus oleovorans Hxd3] Length = 667 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 4/72 (5%) Query: 117 GEEYITQYPESKNVDYV---YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 ++ Y + + Y G+ Y +M + + +RIV R+ +S Sbjct: 61 INAFLDVYEQDPAGPWAAAGLYRAGLLYTEMYKHSYRS-ADLQEAADLFNRIVHRFPDSA 119 Query: 174 YVKGARFYVTVG 185 Y A+ + Sbjct: 120 YSARAKEQLAGL 131 >gi|113461116|ref|YP_719184.1| tetratricopeptide repeat protein [Haemophilus somnus 129PT] gi|112823159|gb|ABI25248.1| conserved hypothetical protein [Haemophilus somnus 129PT] Length = 398 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 71/200 (35%), Gaps = 30/200 (15%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LDS ++ +++++ K A FL + +A + + A +L A + Sbjct: 103 LDSSSNYTFEQKLLAKQQLAKDFLTIGFYDRAENLYILLIDE---PNYAENALQQLAVIY 159 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++++A ++ E+ P N+ +Y Y + + D++ + + + Sbjct: 160 QKTKEWKKAINVAEKLAKISPTEDNIALAHY-----YCEYSLTLGSDEQQQAQAIHILQQ 214 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + S + I Y+ EY A+ + VL +A+ Sbjct: 215 ALNVSKTSVRAS-----------------ILIAERYIVNLEYQRAVQHLENVL--IQNAD 255 Query: 225 HAEEAMARLVEAYVALALMD 244 + E + L Y L +D Sbjct: 256 YMSEILPALKYCYQELNRLD 275 >gi|258405687|ref|YP_003198429.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfohalobium retbaense DSM 5692] gi|257797914|gb|ACV68851.1| Tetratricopeptide TPR_2 repeat protein [Desulfohalobium retbaense DSM 5692] Length = 339 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 41/130 (31%), Gaps = 28/130 (21%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGAR--------FYVTVGRNQLAAKE---------- 193 Q L + + VE Y A + + +LA E Sbjct: 81 QEHPSKALPALQKAVELKP--QYA-DAHFWLGVAHWAMMDFEKERLA-YERALALEPDHT 136 Query: 194 ---VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 V +G +Y+ R ++ A+ ++ VL A+ E L AR+ Sbjct: 137 QARVYLGHHYVDREQWSLALIHYRRVLDEEPGHPS---ALFYTAECLEQLGREQSARQAW 193 Query: 251 SLIQERYPQG 260 +RYP G Sbjct: 194 KAYLDRYPDG 203 >gi|332290666|ref|YP_004429275.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter diaphorus 4H-3-7-5] gi|332168752|gb|AEE18007.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter diaphorus 4H-3-7-5] Length = 1006 Score = 44.3 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 83/246 (33%), Gaps = 56/246 (22%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +YE +++ + +A +++ RD P + K++L A + + K Sbjct: 606 PNSTYRDDALYELGNIYVSQNKNDQAITAYDKLVRDLPGSSYVSKAMLKKALILDNKNKS 665 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------------------RDV 148 +A +L + YP + L ++ A++I D Sbjct: 666 DEALALLRKVAGDYPGTPEA-----LQAVTTAKLIYIDLGRVDEYGQWVSTLDFIDVEDA 720 Query: 149 PYDQRA------------TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 D A + + Y N + A FY+ QLA Sbjct: 721 ELDDAAYASAEKQYVENNVGQAERLFESYLSDYPNGQHALQAHFYL----GQLA------ 770 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI--Q 254 + EY IP +Q V+ +E E+A+ARL + Y+ A V+ + + Sbjct: 771 ----FAKAEYKKTIPHYQFVITK-ERSEFTEQALARLGQVYLTDKNYTAAIPVLKRLETE 825 Query: 255 ERYPQG 260 +PQ Sbjct: 826 ADFPQN 831 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 59/194 (30%), Gaps = 30/194 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + ++ +++A Y + Y G Y A + + I Sbjct: 252 GESYFNQKRYAEALPYLQAYKGKR--GKWNNTDYYQLGYTYYKQGDYANAINEFNKIID- 308 Query: 124 YPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + +V YY + SY ++ + + L E N+ + + Sbjct: 309 --GNNSVAQNGYYHLAESYLKLDKK--------QEALNAFKNASEMDFNAQIKEDSGLNY 358 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 A EIG Y A I + + Y + E A L+++Y+ Sbjct: 359 -------AKLSYEIGNAY---KSTPAVITDY---IDTYPKSPAKPELEALLIDSYIT--- 402 Query: 243 MDEAREVVSLIQER 256 +E + L++ Sbjct: 403 SKNYKEAMRLLESN 416 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 76/239 (31%), Gaps = 60/239 (25%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y KA +F +A + Q + + + A+ +S +Y+QAA++ E Sbjct: 467 YWKAESDYVANDFKEAIIGYKQFLNNSNAANTPEYQDINYNLAYAYFSDKQYEQAATVFE 526 Query: 119 -----------------------EYIT------QYPESKNV-------DYVYYLVGMSYA 142 +I+ +K++ DY + MSY Sbjct: 527 SYTASNVQDQSKLNDAYLRLGDSRFISSKYWPALEAYNKSIALNMTDQDYATFQKSMSYG 586 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + +D + + ++ NS Y A E+ G Y+ Sbjct: 587 FIKKDEDK--------ISGLQTFSTKFPNSTYRDDAL------------YEL--GNIYVS 624 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + AI + ++ + + + +AM + DEA ++ + YP Sbjct: 625 QNKNDQAITAYDKLVRDLPGSSYVSKAMLKKALILDNKNKSDEALALLRKVAGDYPGTP 683 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 80/217 (36%), Gaps = 16/217 (7%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V ++T + + + K F +A +Y N+ ++ F+ Y Sbjct: 128 VDESTLTAGEKETFYFNNGYAYFKSNRFDEAKKYLNRVRDS---KKYGTQAKYYIGFMAY 184 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM------L 159 +Y++A L EE + + N D Y+ +++ D + ++L Sbjct: 185 EGDEYEEANELFEEVEAETGGAYNEDLAYFKADLNFKLGKFDEAISEGKSQLAKANPTEK 244 Query: 160 QYMSRIV-ERYTNSPYVKGARFYVTVGRNQLAAKE----VEIGRYYLKRGEYVAAIPRFQ 214 +++I+ E Y N A Y+ + + ++G Y K+G+Y AI F Sbjct: 245 SELNKIIGESYFNQKRYAEALPYLQAYKGKRGKWNNTDYYQLGYTYYKQGDYANAINEFN 304 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 ++ + A+ L E+Y+ L EA Sbjct: 305 KIIDG--NNSVAQNGYYHLAESYLKLDKKQEALNAFK 339 >gi|296203513|ref|XP_002748928.1| PREDICTED: intraflagellar transport protein 88 homolog [Callithrix jacchus] Length = 786 Score = 44.3 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 77/233 (33%), Gaps = 22/233 (9%) Query: 7 RAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREVYEKAV 65 +A+ I + + + +++ + +G + Q+S + +D + K Sbjct: 433 QAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAALTNKGN 492 Query: 66 LFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 ++ KA E++ D + +L + +A ++ + Sbjct: 493 TVFANGDYEKAAEFYKEALRND---SSCTE-ALYNVGLTYEKMNRLDEALDC---FLKLH 545 Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 +N V Y + Y M ++++ ++V +P + Sbjct: 546 AILRNSAEVLYQIANIYELM--------ENLSEAIEWLMQVVSVVPTNP---QVLAKLGE 594 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVLANYSDAEHAEEAMARLVEA 236 ++ K + +YY + Y I + + A Y D + E+A+ A Sbjct: 595 LYDREGDKS-QAFQYYYESYRYFPCNIEVVEWLGAYYIDTQFWEKAIQYFERA 646 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 66/222 (29%), Gaps = 67/222 (30%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KAV +L+++++++A E + + V + + + Y + QA+S Sbjct: 420 NKAVTYLRQRDYNQAVEILKMLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 477 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y VG++Y +M R Sbjct: 478 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNVGLTYEKMNR- 533 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y Sbjct: 534 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENLS 569 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AI V++ +A+L E Y +A + Sbjct: 570 EAIEWLMQVVSVVPTNPQV---LAKLGELYDREGDKSQAFQY 608 >gi|254414040|ref|ZP_05027808.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196179176|gb|EDX74172.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 481 Score = 44.3 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 25/187 (13%), Positives = 60/187 (32%), Gaps = 42/187 (22%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-YSAG--- 108 + Y Y +AV+ + + + A + + S+F Y+ Sbjct: 317 NSSYADAYYNRAVVRSQSGDQAGAIA------------DYTQAIRIDSSFAAAYNNRGLA 364 Query: 109 --KYQQAASLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + E++ + P N YY G++Y+++ D + + + Sbjct: 365 RSDLEDQQGAIEDFSQALRINPGKANT---YYNRGLAYSRLRDD--------RRAIADYT 413 Query: 164 RIVERYTNSPYVKG------ARFYVTVGRNQLAAKEVEIGRYYL--KRGEYVAAIPRFQL 215 + NS Y K A + + +A + + + +Y A+ R + Sbjct: 414 EAIRL--NSNYAKAYGNRGLAFARLGELHSAIADLQQAAQLFRAQGRMEDYHKALDRIRQ 471 Query: 216 VLANYSD 222 + + + Sbjct: 472 IQSQFPQ 478 >gi|218781560|ref|YP_002432878.1| hypothetical protein Dalk_3723 [Desulfatibacillum alkenivorans AK-01] gi|218762944|gb|ACL05410.1| hypothetical protein Dalk_3723 [Desulfatibacillum alkenivorans AK-01] Length = 477 Score = 44.3 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 33/92 (35%), Gaps = 7/92 (7%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 K+LL A G + A S ++ YP++++V Y+ + + + Sbjct: 391 PKALLKIAGWLAETGNPKIAISAYNKFAKSYPDNRDVPLAYFRAAQIFHDRLMNQD---- 446 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + I++++ + + Y+ Sbjct: 447 ---KAKGLLKGILKKFPDHAIAPKVKNYLQYI 475 >gi|124008152|ref|ZP_01692850.1| O-linked GlcNAc transferase [Microscilla marina ATCC 23134] gi|123986400|gb|EAY26213.1| O-linked GlcNAc transferase [Microscilla marina ATCC 23134] Length = 425 Score = 44.3 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 88/238 (36%), Gaps = 48/238 (20%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQ 111 + ++++ Y ++ + + KA + + P F L + Y+ Sbjct: 196 NDKFEKAWYNLGATYVDLKQYEKAIPCYEKAIDIKPDFDSW---YSLGLTYTDMKI--YE 250 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 +A E+ I PE++ +Y++G++Y+ + + + + Y + +E N Sbjct: 251 KAIYCFEKAIEINPETEL----WYILGVTYSNLQKH--------EEAIPYYKKSLEINPN 298 Query: 172 SPYVKGARFYVTVG-----RNQLAAKEVEIG---RY----------YLKRGEYVAAIPRF 213 +P V +T R+ L E +G + Y+ GEY +IP F Sbjct: 299 NPLVWY-NLGITYANLGRDRDALPCFEKAVGLNPEFDLVWYNLGIIYINLGEYEKSIPCF 357 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQGYWARYVET 268 Q V+ + ++A+ + AY + D+ E + ++ W R Sbjct: 358 QRVVEEKPN---FDKALYNIARAYNFMKNRDKTLEYLKKFVVL-----NSKWKRNAYK 407 >gi|91203640|emb|CAJ71293.1| hypothetical protein kustc0548 [Candidatus Kuenenia stuttgartiensis] Length = 722 Score = 44.3 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 44/165 (26%), Gaps = 40/165 (24%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEK---------AVLFLKEQNFSKAYEYFNQ---CS 84 G + LD + + +Y+ V + K A EYF + + Sbjct: 539 GLGSVYNSMEKLDEALEEFRESLLYDSKYILAINNVGVNYAKRGKMHDAIEYFEKAVALN 598 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY----YLVGMS 140 ++ P + F + + ++A + P++ N Y +GM Sbjct: 599 QNQPQSYY------NLGFAYENLEEGERAVQAYRRAVQLDPDNFNALLALGNLCYRMGM- 651 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + ++ RY A + Sbjct: 652 --------------ADDAINVFQHMIVRYPG---EVNAYKRLVFL 679 >gi|332260278|ref|XP_003279214.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 3 [Nomascus leucogenys] Length = 804 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 56/299 (18%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 409 QKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 468 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 469 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 521 Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157 ++ + +N V Y + Y Q++ +P D + Sbjct: 522 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 581 Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196 QY + ++ + + A Y + + ++ + Sbjct: 582 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 641 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + + G Y A+ ++ + + E + LV L L D A+E ++ Sbjct: 642 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYAIKLKR 696 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KAV +L+++++++A E + + V + + + Y + QA+S Sbjct: 401 NKAVTYLRQKDYNQAVEILKMLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 458 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 459 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 514 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y Sbjct: 515 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 550 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AI V++ +++L E Y +A + Sbjct: 551 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 589 >gi|17228607|ref|NP_485155.1| hypothetical protein alr1112 [Nostoc sp. PCC 7120] gi|17130458|dbj|BAB73069.1| alr1112 [Nostoc sp. PCC 7120] Length = 731 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 75/217 (34%), Gaps = 28/217 (12%) Query: 55 RYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + R +Y A + +N +A + Q + FP A L+ A A + A Sbjct: 259 KTARNLYRTARGWQVGGKNREQAISTYKQLVQQFPDARETGLGLVRLAE---MAKSNKDA 315 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + I ++PE + + I D++A + Q +++ +Y S Sbjct: 316 LPYLNQVIAKFPEQAS-------QALVKKAEILTALKDEKAAQQTWQ---QLITKYAKS- 364 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 N+ A +I K +Y +A Q ++ N ++ A A L Sbjct: 365 -------------NEAAEYRWKIALEKAKARDYTSAWKWAQPIVVNNPNSILAPRAGFWL 411 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 L EA+ + ++P Y+A L+ Sbjct: 412 GRWAATLGKQQEAQTAYEYVISQFPYSYYAWRSANLL 448 >gi|260172393|ref|ZP_05758805.1| TPR domain-containing protein [Bacteroides sp. D2] gi|315920689|ref|ZP_07916929.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313694564|gb|EFS31399.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 590 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 36/198 (18%) Query: 61 YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y + ++ L ++ KA + FP SLL KY S Sbjct: 122 YSQGLVSLYQQQNELDKAVTLLEKMVTRFPSKQEPLFSLLDI---YSRQEKYNDVISTLN 178 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + +++ + + + Y QM D K Q + +V+ Y Sbjct: 179 RLEKRLGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVQEYP-------- 219 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + +V +G YL+ G+ A +Q VLA D A+ + Y Sbjct: 220 ---MDM------RYQVILGDVYLQNGKKQEAYDAYQKVLAVEPD---NPMALFSMASYYE 267 Query: 239 ALALMDEAREVVSLIQER 256 + ++ + + Sbjct: 268 QTGQKELYQQQLDTLLLN 285 >gi|320450982|ref|YP_004203078.1| tetratricopeptide repeat-containing protein [Thermus scotoductus SA-01] gi|320151151|gb|ADW22529.1| tetratricopeptide TPR_2 [Thermus scotoductus SA-01] Length = 450 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 5/66 (7%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++E AV L + + +A EY +P ++L A Y G+YQ+A + Sbjct: 286 LHEMAVAALDQGAYLEAEEYLEALLREEGYP---YRAQALADLAEALYRQGRYQEAEEMA 342 Query: 118 EEYITQ 123 + Q Sbjct: 343 HRAMRQ 348 >gi|296234173|ref|XP_002762303.1| PREDICTED: serine/threonine-protein phosphatase 5 isoform 2 [Callithrix jacchus] Length = 486 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 53/166 (31%), Gaps = 32/166 (19%) Query: 32 VCFLVGWERQSSRDVYLDSVTD--VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 + G + + + TD ++ E+ +A + K +++ A ++++Q P Sbjct: 1 MAMAEGERTECAEPPRDEPPTDGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS 60 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + Y+ G +A L ++YI YY S + Sbjct: 61 ---------NAIYYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL----- 96 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + L+ +V+ + A+ + K E Sbjct: 97 ---GKFRAALRDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 136 >gi|291572031|dbj|BAI94303.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 265 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 72/226 (31%), Gaps = 64/226 (28%) Query: 56 YQREVYEKAVLFLKEQN-FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SA 107 Y Y + V+ K N ++A F Q R P Y Sbjct: 75 YALAYYNRGVVRFKSGNNLTEAIADFTQAIRLNP----------EYVDAYYNRAIARVKV 124 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y A + I P D +YL G+ Y++ ++D + + + + Sbjct: 125 QQYWPAIDDITQVIRLDPSH---DRAFYLRGLIYSENLKDY-------QTGINDFTEAIR 174 Query: 168 RYTNS--PYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPR 212 + PY K ++ +E I Y Y R AI R Sbjct: 175 LNPGNPAPYFKRGNARY-----RIGDRERAIDDYNKAIEINPSDPEPYYNR-----AISR 224 Query: 213 FQLVLANYSDAEHAEEAMARLVEA---YVALALMDEAREVVSLIQE 255 +Q + + A+ L ++ Y+ L ++ ++ + +++ Sbjct: 225 YQ--IGDRQG------AIFDLQKSADLYMDLGNFEKYQKAIDTLEK 262 >gi|254409568|ref|ZP_05023349.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196183565|gb|EDX78548.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 861 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 17/140 (12%), Positives = 49/140 (35%), Gaps = 21/140 (15%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119 + + ++ +A ++Q P ++ + +YQ A + + Sbjct: 570 NQGDNLFAQGDYEEAIARYDQALELQPDNANLWHQR-----GVALWELQRYQDAIASLDR 624 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + PE+ + +Y G++ + + + L +++++ + Y Sbjct: 625 GLELAPEAPDT---WYYRGLAL--------RELQRYEGALVAFNKVIQIQPD-DYKAWLN 672 Query: 180 FYVTVGRNQLAAKEVEIGRY 199 + +GR L +E I + Sbjct: 673 RGMMLGR--LKRREDAIASF 690 Score = 35.5 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 45/116 (38%), Gaps = 14/116 (12%) Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E + +++ P + K + ++ G Y++A + ++ + P++ N+ ++ Sbjct: 549 EQLERLNQNHPEFFLNVKDYINQGDNLFAQGDYEEAIARYDQALELQPDNANL---WHQR 605 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 G++ ++ R + + + R +E +Y + +L E Sbjct: 606 GVALWELQR--------YQDAIASLDRGLELAPE---APDTWYYRGLALRELQRYE 650 >gi|78222447|ref|YP_384194.1| intermediate filament protein [Geobacter metallireducens GS-15] gi|78193702|gb|ABB31469.1| Intermediate filament protein [Geobacter metallireducens GS-15] Length = 573 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 69/220 (31%), Gaps = 63/220 (28%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 +++++ + + +A F Q P A + A ++ +A EE+ Sbjct: 291 GLIYMELERYDEAIAEFEQILAREP---KAHQIRFYIASAYEEKEEFDKAI---EEFSKI 344 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN------------ 171 P + N Y+ + + I + DQ + +Q ++ + + Sbjct: 345 PPGTAN-----YVEALGH---IAFMYRDQEKPEKGIQILTDAITANPDKLDLYLYLAGLY 396 Query: 172 -----------------SPYVKGARF--YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + + R + +++ KE I R +KR V AI Sbjct: 397 ESMDKFSEGLAVLKGVEGKFAEDPRLHFRMGTILDKMGNKEESIAR--MKR---VIAI-- 449 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALM-DEAREVVS 251 +A+ L Y + + DEA + + Sbjct: 450 ----------TPDDAQALNYLGYTYAEMGIKLDEALQYLK 479 Score = 38.6 bits (89), Expect = 0.97, Method: Composition-based stats. Identities = 33/239 (13%), Positives = 71/239 (29%), Gaps = 42/239 (17%) Query: 21 KFALTIFFSIAVCFLVGWERQ------SSRDVYLDSVTDVRYQREVYEKAVLFLK--EQN 72 K + + +A+ FL G + + ++ R +Y ++ L+ + + Sbjct: 2 KKRIVVALFLALSFLPGCATNGAGKPLPANEHSFQPTVNIAGSRALYIYSLSRLRELDGD 61 Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 F A N P + + +GK A E I P + Sbjct: 62 FEGALTLLNGAIEADPNSAFLHTAAAEI---YLKSGKLDDALRACENAIRVDPGFRP--- 115 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 + G A + RD K + ++S+ +E Sbjct: 116 ARIIAGTILANLKRD--------KEAIVHLSKAIELDPTKEDAY---------------- 151 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 + + Y++ +Y A+ + ++ ++ L + Y + L EA Sbjct: 152 -LHLAISYVRTFDYEQAVNTLKSLIKINPESSLGY---YYLGKTYDQMKLQKEAANYYK 206 Score = 35.5 bits (81), Expect = 8.0, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 57/163 (34%), Gaps = 21/163 (12%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 +A + ++ P + L A Y+QA + + I PES Sbjct: 131 KEAIVHLSKAIELDPT---KEDAYLHLAISYVRTFDYEQAVNTLKSLIKINPESSLG--- 184 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 YY +G +Y QM + K Y + +E + A + + + L + Sbjct: 185 YYYLGKTYDQM--------KLQKEAANYYKKAIEIKPDFE---QAIIDLGISQEGLGLYD 233 Query: 194 VEIGRY--YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 I Y L+ + + Q ++ Y + E+A+ L+ Sbjct: 234 DAIATYKRLLETNPFN--MNVLQHLVQLYLQQQRLEDALPLLI 274 >gi|329963585|ref|ZP_08301064.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057] gi|328528574|gb|EGF55545.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057] Length = 277 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 15/117 (12%), Positives = 32/117 (27%), Gaps = 16/117 (13%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL-----------FLKEQNF 73 +FF++++ Q S D Q E + A ++ Sbjct: 6 ILFFTLSLVMSTNSFAQDSTDTLQVDSMAAVPQAE-FSAAKQQGNVTKAEGDSAYMRNDY 64 Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + A + + + A Y A +A E + P + ++ Sbjct: 65 ASAIQIYENLLKQ---GEAAE-VYYNLGNSYYKADDIAKAILNYERALLLQPGNADI 117 >gi|163757156|ref|ZP_02164258.1| hypothetical protein KAOT1_00785 [Kordia algicida OT-1] gi|161322884|gb|EDP94231.1| hypothetical protein KAOT1_00785 [Kordia algicida OT-1] Length = 1012 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 77/215 (35%), Gaps = 28/215 (13%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 +D+ VT+V + YE A + N KA E F + FP A K+ A Sbjct: 709 KDLDFVDVTNVELDKATYESAEKQFIQNNTDKAIEGFEKYINQFPNGLNAVKANFYLAQS 768 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 +S G+ Q+ E Y+ Q S+ + + V + + + Sbjct: 769 YFSKGETQKTIPHYE-YVLQNEGSEYTEQAL--------ARLSQVFLETDNYTKAIPVLK 819 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQL--AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 R+ E +T ++ L A+ E+ Y A+ + VLAN Sbjct: 820 RLEE-------SADFPQNITFAQSNLMKASYEL---------DNYTQAVSYAEKVLANDK 863 Query: 222 -DAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 D +A + + +A D+A+E +Q+ Sbjct: 864 VDNRIKSDAHVIIARSAIATNDEDKAKEAYQEVQK 898 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 27/236 (11%), Positives = 63/236 (26%), Gaps = 59/236 (25%) Query: 63 KAVLFLKEQNFSKAYEYFNQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 KA N+ A E F + + A+ A+ + +Y A + E++I Sbjct: 469 KAETNYLLDNYDLALEGFKSFANANITDTEEAQTIDYNLAYTYFKQKEYASAITNFEKFI 528 Query: 122 TQYPESK------------------------------------NVDYVYYLVGMSYAQMI 145 + + DY Y+ +SY Sbjct: 529 NNNADDTGRINDSYLRLGDSHFVTSNYGDAIKAYDKAIALKGVDEDYAYFQKAISYGFTG 588 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 + + + + + +Y S A E+ G Y+ + Sbjct: 589 KTNTK--------IDELEKFINKYRKSSLRDDAL------------YEL--GNTYINEEK 626 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 V + + +++ Y + + + + + A + ++P Sbjct: 627 TVKGLDTYAKMVSEYPKSSYVPKTILKQGLINYNSGKNQVALTKFRSVVSKFPNTE 682 Score = 42.8 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 70/226 (30%), Gaps = 17/226 (7%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 YQ+ + +A+ + + +A E+F++ ++ A ++ A Y Y Sbjct: 422 KETYQKVAFYRAIELFNDNKYQEALEFFDKSLKENESAEYTARATFWKAETNYLLDNYDL 481 Query: 113 AASLGEEYITQYPESKN----VDY--VY-------YLVGMSYAQMIRDVPYDQRATKLML 159 A + + +DY Y Y ++ + + D ++ Sbjct: 482 ALEGFKSFANANITDTEEAQTIDYNLAYTYFKQKEYASAITNFEKFINNNADDTG-RIND 540 Query: 160 QYMSRIVERYTNSPY--VKGARFYVTVGRNQLAAKE-VEIGRYYLKRGEYVAAIPRFQLV 216 Y+ + S Y A + + Y G+ I + Sbjct: 541 SYLRLGDSHFVTSNYGDAIKAYDKAIALKGVDEDYAYFQKAISYGFTGKTNTKIDELEKF 600 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + Y + ++A+ L Y+ + + + + YP+ + Sbjct: 601 INKYRKSSLRDDALYELGNTYINEEKTVKGLDTYAKMVSEYPKSSY 646 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 51/187 (27%), Gaps = 33/187 (17%) Query: 64 AVLFLKEQNFSKAYEYFNQCS---RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + + + +A Y + R + + + Y Y+ A + Sbjct: 252 GESYFNLKKYKEAIPYLKEYKGKKRRWNNTDFYQ-----LGYAYYKQEDYENAIKQFNKI 306 Query: 121 ITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I S +V YY +G Y + + L + + + A Sbjct: 307 ID---GSNSVAQNAYYHLGECYLNTDKK--------QQALNAFRNASQMDFDLKIQEDAG 355 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 A EIG Y + L Y D EH E LV +Y+ Sbjct: 356 LNY-------ARLSYEIG------NPYESVPSVLTSYLKKYPDTEHQAELEELLVSSYIT 402 Query: 240 LALMDEA 246 + A Sbjct: 403 SKDYEAA 409 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 73/209 (34%), Gaps = 31/209 (14%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGK-YQQA 113 + + ++ ++ A F FP A + + +++ + Y Sbjct: 648 PKTILKQGLINYNSGKNQVALTKFRSVVSKFPNTEEAIQAVATAKLIYIELGQVEVYANW 707 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + ++ + +D Y + + Q T ++ + + ++ N Sbjct: 708 VKDLD-FVDV--TNVELDKATY--------ESAEKQFIQNNTDKAIEGFEKYINQFPNGL 756 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 A + + Y +GE IP ++ VL N +E+ E+A+ARL Sbjct: 757 NAVKAN--------------FYLAQSYFSKGETQKTIPHYEYVLQN-EGSEYTEQALARL 801 Query: 234 VEAYVALALMDEAREVVSLIQE--RYPQG 260 + ++ +A V+ ++E +PQ Sbjct: 802 SQVFLETDNYTKAIPVLKRLEESADFPQN 830 Score = 35.5 bits (81), Expect = 8.1, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 76/215 (35%), Gaps = 26/215 (12%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T+ + + ++K + + + +A YF + ++ + ++ Y KY Sbjct: 136 TNSQREDYNFKKGYAYFTSKKYDQAKTYFQKLLDSQ---KYGSQAKYYTGYIAYQEDKYD 192 Query: 112 QAASLGEEYITQYPESKNVDY---VYYLVG-----MSYAQMIRDVPYD--QRATKLMLQY 161 +A + S+ +Y + Y + Q D+ A + + Sbjct: 193 EANEYFDG------VSEEDEYNEKLSYFKADMNFKLGNFQKAIDLSKKELPNADRKEISE 246 Query: 162 MSRIV-ERYTNSPYVKGARFYVTVGRNQLAAKE----VEIGRYYLKRGEYVAAIPRFQLV 216 +++I+ E Y N K A Y+ + + ++G Y K+ +Y AI +F + Sbjct: 247 LNKIIGESYFNLKKYKEAIPYLKEYKGKKRRWNNTDFYQLGYAYYKQEDYENAIKQFNKI 306 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 + A+ A L E Y+ +A Sbjct: 307 IDG--SNSVAQNAYYHLGECYLNTDKKQQALNAFR 339 >gi|51261007|gb|AAH78786.1| Protein phosphatase 5, catalytic subunit [Rattus norvegicus] Length = 499 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 52/164 (31%), Gaps = 32/164 (19%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKS 96 + RD T ++ E+ +A + K +++ A ++++Q P +S Sbjct: 11 CAEPPRDEPPAEGT-LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS 69 Query: 97 LLMSAF----VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 A+ Y+ G +A L ++YI YY S + Sbjct: 70 ---LAYLRTECYGYALGDATRAIDLDKKYIK----------GYYRRAASNMAL------- 109 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + L+ +V+ N A+ + K E Sbjct: 110 -GKFRAALRDYETVVKVKPNDK---DAKMKYQECSKIVKQKAFE 149 >gi|328954592|ref|YP_004371926.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca acetoxidans DSM 11109] gi|328454916|gb|AEB10745.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca acetoxidans DSM 11109] Length = 668 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 38/118 (32%), Gaps = 34/118 (28%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP---FAGVAR--------KSLLMSAF------- 102 Y + V + + + A F++ + P + R K L A Sbjct: 91 YNQGVDYFHTKQYDLAVATFSRIIANHPDHVESYYNRGLIYTLLGKEELAIADFGTVLRL 150 Query: 103 ------VQY-------SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 Y G+Y QA + + P VY+L G++Y+++ R Sbjct: 151 DPVRPAAYYNRGMAHSRRGRYDQAIADYNRALELNPGD---AQVYHLRGIAYSKLGRS 205 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 44/145 (30%), Gaps = 31/145 (21%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + +Y A + I +P+ YY G+ Y + ++ +L + Sbjct: 97 YFHTKQYDLAVATFSRIIANHPDHVES---YYNRGLIYTLLGKE--------ELAIADFG 145 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 ++ V+ A +Y +A +RG Y AI + L Sbjct: 146 TVLRLDP----VRPAAYY----NRGMAHS---------RRGRYDQAIADYNRALELNPGD 188 Query: 224 EHAEEAMARLVEAYVALALMDEARE 248 AY L D A+E Sbjct: 189 AQVY---HLRGIAYSKLGRSDLAKE 210 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 3/87 (3%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G +Q+ D+ D + Y + +++ K + + A FNQ P +A + Sbjct: 566 TGHLQQAVADLEKAVSLDPKDADAYYNRGLIYDKRKQYDLAIADFNQALALNP--RLA-Q 622 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYIT 122 + A G+ Q+A E ++ Sbjct: 623 AYYDRAVALEKTGRRQEALDSYEAFLR 649 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 16/141 (11%), Positives = 36/141 (25%), Gaps = 33/141 (23%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAG 108 Y + Y +A ++ + +A + P A Y Sbjct: 552 YAKAYYNRAQVYYFTGHLQQAVADLEKAVSLDP----------KDADAYYNRGLIYDKRK 601 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y A + + + P + YY ++ + R + L + Sbjct: 602 QYDLAIADFNQALALNPR---LAQAYYDRAVALEKTGRR--------QEALDSYEAFLRC 650 Query: 169 YTNSPYVKGARFYVTVGRNQL 189 + +N+L Sbjct: 651 AP-----PELSGQIEKAQNRL 666 >gi|153004639|ref|YP_001378964.1| hypothetical protein Anae109_1777 [Anaeromyxobacter sp. Fw109-5] gi|152028212|gb|ABS25980.1| TPR repeat-containing protein [Anaeromyxobacter sp. Fw109-5] Length = 710 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 60/199 (30%), Gaps = 45/199 (22%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + ++ +N+ A E + + P A + G+ +A + + ++ Sbjct: 49 SRGRANMRIENYGAAIEAWRKALELNPNGREASR---ELCRALLRNGETDRAVAELDRHL 105 Query: 122 TQYPESKNVD-----------YVY-------YLV-GM-------SYAQMIRDVPYDQRAT 155 ++P+ + Y Y YL G+ ++ R + D+R Sbjct: 106 GRFPDDWQLAFEQARLLQWSRYAYRSGDAVKYLRMGLARRDDPARRRELARLLGRDRRTL 165 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 L ++ A+ + L R AI + Sbjct: 166 DEALDEYRALLAAAPE-----DAKLRDEWLKLLL-----------WDRRHRAEAIRELER 209 Query: 216 VLANYSDAEHAEEAMARLV 234 LA E A A+AR+V Sbjct: 210 RLAANPGDERAARALARIV 228 >gi|86606961|ref|YP_475724.1| TPR repeat- and protein kinase domain-containing protein [Synechococcus sp. JA-3-3Ab] gi|86555503|gb|ABD00461.1| protein kinase domain/TPR repeat protein [Synechococcus sp. JA-3-3Ab] Length = 952 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 70/204 (34%), Gaps = 38/204 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + K +++ A E F + + G A ++ +Y G Y+ A + + Sbjct: 337 QRGSVRYKTGDWAGAVEDFTRAIQL--GGGDA-RTYFNRGIARYRLGNYEGAVADYTHAL 393 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + YY G +Y Q+ DQ + ++ SR +E R Y Sbjct: 394 RL---DPHWALAYYSRGNAYRQL------DQ--PQQAIEDYSRALELNPE-----EVRAY 437 Query: 182 VT--VGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYSDA--- 223 V R QL + + + Y RG A + FQ + +Y+ A Sbjct: 438 FNRGVVRGQLGDAQGAVADFSEVLRRDPQDTEAYFNRGVARAQLLDFQGAIEDYTQALQL 497 Query: 224 -EHAEEAMARLVEAYVALALMDEA 246 +A R A AL + A Sbjct: 498 DPGHPKACYRRGLARQALGDLQGA 521 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 15/127 (11%), Positives = 35/127 (27%), Gaps = 20/127 (15%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGV------ARKSLLMS--AFV 103 D + + Y + + + A F + A ++ L A Sbjct: 498 DPGHPKACYRRGLARQALGDLQGAITDFSQAIALRATQGEEPSGAVAAAQAELYLQRAVA 557 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 S + A + E+ + P + ++ G++ + L + Sbjct: 558 YLSNNALEAALADCEQALRLNPA---LALAHFYRGLARQGLGDPAG--------ALADFN 606 Query: 164 RIVERYT 170 R +E Sbjct: 607 RALELDP 613 >gi|42524129|ref|NP_969509.1| soluble lytic murein transglycosylase [Bdellovibrio bacteriovorus HD100] gi|39576337|emb|CAE80502.1| soluble lytic murein transglycosylase [Bdellovibrio bacteriovorus HD100] Length = 790 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 40/94 (42%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + F + S A V S Y S ++ +Y+ A L + Q++ A Sbjct: 264 FDFLILFASSAARAGEVQLAVGSYYSAYKLSPKSKTGRQALYQSAFLSYQFQDYDGAARR 323 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 F + + +P +G+ R + A+++Y G YQ A Sbjct: 324 FQEFMKAYPSSGLNRDAQWHLAWLKYLKGDYQGA 357 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 14/83 (16%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + L ++ AY+ P + R++L SAF+ Y Y AA +E++ Sbjct: 277 AGEVQLAVGSYYSAYKL-------SPKSKTGRQALYQSAFLSYQFQDYDGAARRFQEFMK 329 Query: 123 QYPESK-------NVDYVYYLVG 138 YP S ++ ++ YL G Sbjct: 330 AYPSSGLNRDAQWHLAWLKYLKG 352 Score = 35.5 bits (81), Expect = 8.9, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 73/207 (35%), Gaps = 47/207 (22%) Query: 63 KAVLFLKEQNFSKAYE----YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +A +L+E +KA E Y+ R+F F L++ A AG+ Q A Sbjct: 236 QAQFYLQEGEVTKAVELLKPYYEANKRNFDF-------LILFASSAARAGEVQLAVGSYY 288 Query: 119 EYITQYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 P+SK Y +SY +D + ++ Y +S + Sbjct: 289 SAYKLSPKSKTGRQALYQSAFLSY--QFQDYDG-------AARRFQEFMKAYPSSGLNRD 339 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLK---RGEYV------AAIPRFQLVLANYSDAEHAEE 228 A++++ + YLK +G Y AA + + ++ + Sbjct: 340 AQWHLAWLK-------------YLKGDYQGAYKALGNLNAAKKKNRKAWKSFPEDRVT-- 384 Query: 229 AMARLVEAYVALALMDEAREVVSLIQE 255 + + +++A+ ++S + + Sbjct: 385 --YWMAMSLFRQGKVEQAKAMMSSLAK 409 >gi|163782812|ref|ZP_02177808.1| hypothetical protein HG1285_15791 [Hydrogenivirga sp. 128-5-R1-1] gi|159881933|gb|EDP75441.1| hypothetical protein HG1285_15791 [Hydrogenivirga sp. 128-5-R1-1] Length = 546 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 72/204 (35%), Gaps = 36/204 (17%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + + KA E + + FP ++ + A +G+ ++A + + + P + Sbjct: 97 KGDRKKAIEVLEKARKKFP---KNKEIFIFLADEYIKSGRMKEAKEVLQRFAELSPNNP- 152 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + YYL+G Y + V + L + Sbjct: 153 --FPYYLLGQLYLSEGK-VDRAIEYLQRALDIRKTFEAAF-------------------- 189 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 V +G+ Y + + A ++ +L + A+ +L + Y+A + EA+E+ Sbjct: 190 ----VTLGKIYERSERFSEAEKLYRSILKEDPNNRS---ALEKLAQLYMATGRIQEAKEL 242 Query: 250 VSLIQERYPQGYWAR--YVETLVK 271 + P Y + + TL++ Sbjct: 243 YERLYRIDPTNYQYKHQFAVTLLQ 266 >gi|197106555|ref|YP_002131932.1| hypothetical protein PHZ_c3094 [Phenylobacterium zucineum HLK1] gi|196479975|gb|ACG79503.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 282 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 14/102 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + VE + + AR++ K + + RG + A + + Sbjct: 175 AEDAFAAFVETWPDGQRTPEARYWW--------GKTLSV------RGAHNDAATAYIGAI 220 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + A +A+ L + VAL +A ++ + +RYP+ Sbjct: 221 RGWPQTSWAPDAVVELARSLVALKKPQDACRTLAELPKRYPK 262 >gi|90418978|ref|ZP_01226889.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gi|90337058|gb|EAS50763.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 315 Score = 44.3 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 38/134 (28%), Gaps = 23/134 (17%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A+ AG YQ A +Y YP + + Y +G S Q + Sbjct: 196 DLAYNYLLAGDYQLAEQAFRQYAQTYPTAADAPDARYWLGESLYQQQKFAD--------A 247 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + + + + + +L +E A ++ V Sbjct: 248 AEVFLEAQKSAPENGKAPEMMLKLGMSLAKLDNRE--------------TACITYKEVAK 293 Query: 219 NYSD-AEHAEEAMA 231 Y + + + +A Sbjct: 294 RYPQMSSNVRKKLA 307 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 46/141 (32%), Gaps = 10/141 (7%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 V L + + + Y+ A +L ++ A + F Q ++ +P A Sbjct: 167 GVPGLGDSAPSGGSETVAAITPGGQGET--YDLAYNYLLAGDYQLAEQAFRQYAQTYPTA 224 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 A + Y K+ AA + E PE+ + +GMS A++ Sbjct: 225 ADAPDARYWLGESLYQQQKFADAAEVFLEAQKSAPENGKAPEMMLKLGMSLAKLDNR--- 281 Query: 151 DQRATKLMLQYMSRIVERYTN 171 + + +RY Sbjct: 282 -----ETACITYKEVAKRYPQ 297 >gi|291571512|dbj|BAI93784.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 491 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 39/127 (30%), Gaps = 14/127 (11%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 S + E +E+ + +A + + + P A Y G Sbjct: 20 PSGLAAQTVGEWFERGNAARAAGRYREAEQIWREFLEIEPNNAYAHN---NLGVALYHQG 76 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 K +A + P + + + +G++ A DQ ++ R + Sbjct: 77 KLPEAIEAYRRALALDPNN---AWAHNNLGLALA--------DQGKLPEAIEAYRRALAL 125 Query: 169 YTNSPYV 175 +N+ Y Sbjct: 126 DSNNAYA 132 Score = 35.5 bits (81), Expect = 7.7, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 15/56 (26%), Gaps = 3/56 (5%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 V + +A E + + P A + Y GK +A Sbjct: 135 NLGVALRNQGKLPEAIEAYRRALALDPNNAYAHN---NLGYALYLQGKLPEAIDAY 187 >gi|262370232|ref|ZP_06063558.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262314574|gb|EEY95615.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 281 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 13/118 (11%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q K + M ++ NS Y+ A F+ LA + I + Y A Sbjct: 176 QGGAKKAIAPMQNFIKNNPNSVYISNAYFW-------LAEFNLAI-----EPTNYAEAKK 223 Query: 212 RFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + +V Y ++ A A+ +L A +A + + + ++YP+ A + + Sbjct: 224 NYGIVANQYPNSSRAPRAVYQLYNIAKEVDKNTTQANQYKAKLLKQYPKSEEATFFKK 281 Score = 35.5 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 27/78 (34%), Gaps = 6/78 (7%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G ++A + + +I P S + Y+ ++ + + + Sbjct: 174 YKQGGAKKAIAPMQNFIKNNPNSVYISNAYFW--LAEFNLAIE----PTNYAEAKKNYGI 227 Query: 165 IVERYTNSPYVKGARFYV 182 + +Y NS A + + Sbjct: 228 VANQYPNSSRAPRAVYQL 245 >gi|223935536|ref|ZP_03627453.1| TPR repeat-containing protein [bacterium Ellin514] gi|223895946|gb|EEF62390.1| TPR repeat-containing protein [bacterium Ellin514] Length = 1072 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 43/109 (39%), Gaps = 14/109 (12%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A ++++ + + A Q R P ++ L+ A + G Y +A + ++ Sbjct: 374 AEIYIRSGDLNSAVALLTQLVRQQP---RLVQAQLLLAEAYRARGNYAEALGIYDQLRQS 430 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 +P YV Y G+++ QM + + + +++ ++ Sbjct: 431 FPHEPQ--YV-YKAGLTFIQMNKK--------EEAQKAFEKVLVMSPDN 468 Score = 42.4 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 69/211 (32%), Gaps = 28/211 (13%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A L E+ F +A ++ P + + G +A + E+ + Sbjct: 272 AETALSEKQFDEAMAIIDKVLIRDPENFDFLQ---LHGRTYLGKGDSAKALAEFEKTVRL 328 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-----------S 172 YP+S +Y + ++ D P + K L + Y S Sbjct: 329 YPQSPQ---AFYHLALAQMVA-NDSPKALGSLKQALA----LNRSYPEAQLLSAEIYIRS 380 Query: 173 PYVKGARFYVTVGRN---QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 + A +T +L ++ + Y RG Y A+ + + ++ H + Sbjct: 381 GDLNSAVALLTQLVRQQPRLVQAQLLLAEAYRARGNYAEALGIYDQLRQSFP---HEPQY 437 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + ++ + +EA++ + P Sbjct: 438 VYKAGLTFIQMNKKEEAQKAFEKVLVMSPDN 468 >gi|298374133|ref|ZP_06984091.1| TPR domain protein [Bacteroides sp. 3_1_19] gi|298268501|gb|EFI10156.1| TPR domain protein [Bacteroides sp. 3_1_19] Length = 1186 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 58/177 (32%), Gaps = 26/177 (14%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + E ++P++++ YY V Y ++ T L +Y +++ Sbjct: 607 KLEDIPLSVEAFENLERRFPDNEHRLESYYQV---YLMALKT-----GNTALATEYKNKL 658 Query: 166 VERYTNSPYVKGAR--------FYVTVGRNQLAAKEVEIGRY--YLKRG-EYVAAIPRFQ 214 + + S Y + V ++ + Y YL+ YV F+ Sbjct: 659 MNAFPESDYAVAVADPNYEYNIRMMDVVQDS-----IYQATYDRYLESDTAYV--RKSFR 711 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 V Y A + M +YV + + + + E+YP ++K Sbjct: 712 YVSEKYPLATLMPKFMFLDALSYVQAGDAEGFKNALKALVEKYPNADVTELAGEMLK 768 >gi|262382954|ref|ZP_06076091.1| TPR domain-containing protein [Bacteroides sp. 2_1_33B] gi|262295832|gb|EEY83763.1| TPR domain-containing protein [Bacteroides sp. 2_1_33B] Length = 1181 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 58/177 (32%), Gaps = 26/177 (14%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + E ++P++++ YY V Y ++ T L +Y +++ Sbjct: 607 KLEDIPLSVEAFENLERRFPDNEHRLESYYQV---YLMALKT-----GNTALATEYKNKL 658 Query: 166 VERYTNSPYVKGAR--------FYVTVGRNQLAAKEVEIGRY--YLKRG-EYVAAIPRFQ 214 + + S Y + V ++ + Y YL+ YV F+ Sbjct: 659 MNAFPESDYAVAVADPNYEYNIRMMDVVQDS-----IYQATYDRYLESDTAYV--RKSFR 711 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 V Y A + M +YV + + + + E+YP ++K Sbjct: 712 YVSEKYPLATLMPKFMFLDALSYVQAGDAEGFKNALKALVEKYPNADVTELAGEMLK 768 >gi|261416875|ref|YP_003250558.1| hypothetical protein Fisuc_2490 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373331|gb|ACX76076.1| hypothetical protein Fisuc_2490 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302325951|gb|ADL25152.1| putative lipoprotein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 693 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 41/121 (33%), Gaps = 16/121 (13%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQA 113 + +Y +A ++ KAY ++ + VA+K+ A V ++ +A Sbjct: 557 KSADSLYTQA------KSLEKAYLAWSGIRERYVDIDSVAKKATFELAHVYSDQEEFDKA 610 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMS-YAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + +P+S + + + G + +D L+ + Y S Sbjct: 611 QREYRAFYRTWPDSPDAEKAMFSRGFILNENLHKDA--------EALKVFEEFKKLYPKS 662 Query: 173 P 173 Sbjct: 663 E 663 Score = 35.9 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 5/94 (5%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 + W R V +DSV +E A ++ ++ F KA + R +P + A K Sbjct: 574 LAWSGIRERYVDIDSVAKKAT----FELAHVYSDQEEFDKAQREYRAFYRTWPDSPDAEK 629 Query: 96 SLLMSAFV-QYSAGKYQQAASLGEEYITQYPESK 128 ++ F+ + K +A + EE+ YP+S+ Sbjct: 630 AMFSRGFILNENLHKDAEALKVFEEFKKLYPKSE 663 >gi|217033595|ref|ZP_03439023.1| hypothetical protein HP9810_899g31 [Helicobacter pylori 98-10] gi|216943941|gb|EEC23375.1| hypothetical protein HP9810_899g31 [Helicobacter pylori 98-10] Length = 793 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 32/99 (32%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + + TD +Y Sbjct: 207 RTISRAFKNYPQTIFKKDLYLLEIIALVQLGIKKSLLIDIGTKWIKNYPTDPSIPEVLYY 266 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 267 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 305 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 178 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALVQLG 237 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP ++ V Y V + + K ++Y RI+ Sbjct: 238 IKKSLLIDIGTKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 289 Query: 168 RYTNSPYVKGARFYVTV 184 Y NS Y A+ + + Sbjct: 290 EYKNSRYAPLAQMRLAI 306 >gi|157879372|pdb|1NA3|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized Tpr Motif gi|157879373|pdb|1NA3|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized Tpr Motif Length = 91 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 3/70 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + K+ ++ +A EY+ + P ++ Y G Y +A ++ Sbjct: 13 YNLGNAYYKQGDYDEAIEYYQKALELDPNNA---EAWYNLGNAYYKQGDYDEAIEYYQKA 69 Query: 121 ITQYPESKNV 130 + P + Sbjct: 70 LELDPNNAEA 79 Score = 38.6 bits (89), Expect = 0.92, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 30/85 (35%), Gaps = 11/85 (12%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + ++ Y G Y +A ++ + P + +Y +G +Y + Q Sbjct: 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---AEAWYNLGNAYYK--------Q 56 Query: 153 RATKLMLQYMSRIVERYTNSPYVKG 177 ++Y + +E N+ K Sbjct: 57 GDYDEAIEYYQKALELDPNNAEAKQ 81 >gi|320160833|ref|YP_004174057.1| hypothetical protein ANT_14290 [Anaerolinea thermophila UNI-1] gi|319994686|dbj|BAJ63457.1| hypothetical protein ANT_14290 [Anaerolinea thermophila UNI-1] Length = 839 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 57/137 (41%), Gaps = 13/137 (9%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 Y++ D+ ++ +A + N+ +KA E + +C FP A ++R++L ++ Y Sbjct: 424 YVNKAGDIEDAPQILFEAGRIFERGNYLTKAVETWQECHEKFPAAEISRRALFLAGITLY 483 Query: 106 SAGKYQQAASLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + Q+ + + ++ PE + Y++ VG +Y + + Sbjct: 484 RLNDFSQSRLIFQRFLILSDNPEDQAAAYLW--VGKTYQA--------ENNLQQAKIAWE 533 Query: 164 RIVERYTNSPYVKGARF 180 + V+R Y + A Sbjct: 534 QAVQRDPTGYYSQRASE 550 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 76/215 (35%), Gaps = 22/215 (10%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E L +F +A E F + ++L+ Y + Y+QA + I Sbjct: 97 ELGESHLFMGDFDRAREEFQNILTTTNDEKIQAEALIELGKTSYLSRNYEQAIKELTQGI 156 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY---MSRIVERYT-----NSP 173 TQ P+SKN + + +S+ + + KL ++ ++ + N+ Sbjct: 157 TQNPQSKNAGTAWLHLALSFEALNKPDAASDAYAKLAEIIPPVLNDYIQEWRGDALLNAQ 216 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ---LVLANY-----SDAEH 225 A + + L A + +LK + A+ R Q ++ + S + Sbjct: 217 RPAEAAQAYQMALDALPADTDAV---WLKIKK-ARALARAQDTSTAISEFLSAYESTSNQ 272 Query: 226 AEEAM--ARLVEAYVALALMDEAREVVSLIQERYP 258 +A L + Y+ L + ++A YP Sbjct: 273 YAKAQINFLLGQIYLNLGVPEQAYARFQDSVTNYP 307 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 39/136 (28%), Gaps = 26/136 (19%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV------------QYSAGKYQ 111 ++L +AY F ++P A + L+ Y AG+Y Sbjct: 283 GQIYLNLGVPEQAYARFQDSVTNYPMAYDSYSGLVELIKAGQPVDELNRGLVDYFAGQYG 342 Query: 112 QAASLGEEYITQYPESKNVD--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 A YI +S+ +Y GMS M + I+E+ Sbjct: 343 LAVEAFTRYI----DSQEAPSSTAFYYRGMSRFYM--------SEYGNAIADFDVIIEKN 390 Query: 170 TNSPYVKGARFYVTVG 185 N + A Sbjct: 391 PNDRFWVKAYQQKAYI 406 >gi|224539995|ref|ZP_03680534.1| hypothetical protein BACCELL_04907 [Bacteroides cellulosilyticus DSM 14838] gi|224518385|gb|EEF87490.1| hypothetical protein BACCELL_04907 [Bacteroides cellulosilyticus DSM 14838] Length = 279 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 13/122 (10%), Positives = 32/122 (26%), Gaps = 14/122 (11%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF----------L 68 + K F + + + S + + E A Sbjct: 2 MKKILFFTFVGLLMALTSFGQTASDTLQQANDSVTIGSHTEFSAAAQENSVTKAEGDSVY 61 Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 + +++ A + + ++ A Y AG +A E + P + Sbjct: 62 VKNDYASAIQIYEALLKE---GEAAE-VYYNLGNSYYKAGDIAKAILNYERALLIQPGNA 117 Query: 129 NV 130 ++ Sbjct: 118 DI 119 >gi|78357188|ref|YP_388637.1| TPR domain-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219593|gb|ABB38942.1| TPR domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 335 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 53/142 (37%), Gaps = 8/142 (5%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + +YE+A+ KE+N+ A + + + FP + ++ Sbjct: 202 NTTAQTAPKADPADMLYEQALASFKERNYQAAQRQWKEFATAFPAHAMVANAVFWQGECF 261 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y Y +A ++ +T++ +S YL M + + TK + Sbjct: 262 YQMEDYARAVLAYQDVVTKHADSSK-----YLPAM--LKQGISLIR-LGKTKAGKIRLEE 313 Query: 165 IVERYTNSPYVKGARFYVTVGR 186 I++++ +P K A + + Sbjct: 314 IIKKHPGTPEAKRAATVLKETK 335 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 43/139 (30%), Gaps = 22/139 (15%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L A + YQ A +E+ T +P V + G + QM D Sbjct: 217 LYEQALASFKERNYQAAQRQWKEFATAFPAHAMVANAVFWQGECFYQM-EDYAR------ 269 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + +V ++ +S A + +L G+ A R + + Sbjct: 270 -AVLAYQDVVTKHADSSKYLPAMLKQGISLIRL--------------GKTKAGKIRLEEI 314 Query: 217 LANYSDAEHAEEAMARLVE 235 + + A+ A L E Sbjct: 315 IKKHPGTPEAKRAATVLKE 333 >gi|300866960|ref|ZP_07111632.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300335064|emb|CBN56796.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 156 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 18/116 (15%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASL 116 E+ ++ + L +FS+A + + D P FA R+++L Y+ G YQ++ Sbjct: 42 EMLRRSQILLDAGDFSRALDILTKLIADSPDFAEAWNRRAVL-----YYTQGDYQKSLDD 96 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 EE I P + +G+ YA + + + + +E S Sbjct: 97 CEEVIKINPIHFG---ALHGLGLCYAAL--------GNYRKAIVAFRQALEIQPYS 141 >gi|255558752|ref|XP_002520400.1| protein phosphatase-5, putative [Ricinus communis] gi|223540447|gb|EEF42016.1| protein phosphatase-5, putative [Ricinus communis] Length = 476 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 37/130 (28%), Gaps = 33/130 (25%) Query: 64 AVLFLKEQNFSKAYEYFN---QCSRD---FPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 A K + +A + + + + + A ++ F +Y A Sbjct: 12 ANEAFKAHKYGQAIDLYTQAIKLNGQNAVY----WANRA-----FAHTKLEEYGSAIQDA 62 Query: 118 EEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 I P+ Y YY G +Y M K L+ ++ + N P Sbjct: 63 TMAIEIDPK-----YSKGYYRRGAAYLAM--------GKFKEALKDFQQVKKICPNDP-- 107 Query: 176 KGARFYVTVG 185 A + Sbjct: 108 -DATKKLKEC 116 >gi|218439579|ref|YP_002377908.1| hypothetical protein PCC7424_2626 [Cyanothece sp. PCC 7424] gi|218172307|gb|ACK71040.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424] Length = 169 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 13/136 (9%), Positives = 44/136 (32%), Gaps = 7/136 (5%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 ++++ F+ + + + +D + + ++ + + ++ A E F + +P Sbjct: 23 AVSLSFVSSSDESLNLGLISQVSSDEQIREDMLIEGMDKGILGDYQGAIEDFTEVIDLYP 82 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 + ++ G Y A + + I+ + N+ Y Y + Sbjct: 83 DSA---EAYYNRGIAYSKLGNYDAAIADYNQAISL---NSNLAEAYVDRAKIYFH-FGNS 135 Query: 149 PYDQRATKLMLQYMSR 164 + + + Sbjct: 136 SKGLKDLQRAADIFKQ 151 >gi|116329178|ref|YP_798898.1| thioredoxin domain-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330214|ref|YP_799932.1| thioredoxin domain-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116121922|gb|ABJ79965.1| Thioredoxin domain-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123903|gb|ABJ75174.1| Thioredoxin domain-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 332 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 17/153 (11%), Positives = 51/153 (33%), Gaps = 25/153 (16%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---------SRDFPFAGVA 93 ++ D + ++ V + + + ++KA ++F + + Sbjct: 196 EKEYLEKLAKDPNGIKTNFQAGVYYFEAKEYTKAIQFFRKVIDANDTKNTDKKH------ 249 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 +L G ++ A + YI++YP ++ + Y +Y ++ R Sbjct: 250 -DALFNLGISYLEVGNFKFAIATFNSYISRYPNG-DLSSILYFRANAYEELNRK------ 301 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + +++E + + +F + Sbjct: 302 --EEAKADYKKVLELTVDPEEKRDLQFRIDSLN 332 Score = 39.3 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 2/76 (2%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLA--NYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 + G YY + EY AI F+ V+ + + + +A+ L +Y+ + A + Sbjct: 214 FQAGVYYFEAKEYTKAIQFFRKVIDANDTKNTDKKHDALFNLGISYLEVGNFKFAIATFN 273 Query: 252 LIQERYPQGYWARYVE 267 RYP G + + Sbjct: 274 SYISRYPNGDLSSILY 289 >gi|297579702|ref|ZP_06941629.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297535348|gb|EFH74182.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 413 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 48/133 (36%), Gaps = 14/133 (10%) Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63 +L A+C+F F+L + F +++ W S + D + E Y + Sbjct: 107 LLIAALCLFRRGVI----FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMRMFNNEQYAQ 159 Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLG 117 A ++ + A Y+ + ++ + A G+ Q+A L Sbjct: 160 AAEAFRDPRWQGAARYYAK-DYQGAIDAYSQIANPDTATQYNLANAYAQTGELQKAQDLY 218 Query: 118 EEYITQYPESKNV 130 E+ + Q P ++ Sbjct: 219 EQVLKQEPNHQDA 231 >gi|161528189|ref|YP_001582015.1| TPR repeat-containing protein [Nitrosopumilus maritimus SCM1] gi|160339490|gb|ABX12577.1| Tetratricopeptide TPR_2 repeat protein [Nitrosopumilus maritimus SCM1] Length = 375 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 47/122 (38%), Gaps = 15/122 (12%) Query: 50 SVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 S+ DV Y R+ +++K V + ++ +A F Q R P LL + ++ Sbjct: 28 SLVDVDYNRKRLFKKGVNLMADEKLEEAITVFEQALRIDPDNVET---LLKLGYARFHLD 84 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + +A + ++ + + + L G+ + + Q+ L + + +E Sbjct: 85 DHHEALRVYDKILDIDVTNPE---AWNLKGLVHYE--------QKNYSKALDSVEKAIET 133 Query: 169 YT 170 Sbjct: 134 DP 135 >gi|149731218|ref|XP_001500110.1| PREDICTED: similar to LOC511799 protein [Equus caballus] Length = 697 Score = 44.3 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P+ ++V LV + Y + + D D A+ + Sbjct: 304 FAYYRVGEYVKALECAKAYLLLHPDDEDV-----LVNVDYYESLLDDSVDP-ASIEARED 357 Query: 162 MSRIVERY 169 ++ V+R+ Sbjct: 358 LAMFVKRH 365 >gi|256422077|ref|YP_003122730.1| hypothetical protein Cpin_3056 [Chitinophaga pinensis DSM 2588] gi|256036985|gb|ACU60529.1| TPR repeat-containing protein [Chitinophaga pinensis DSM 2588] Length = 543 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 57/195 (29%), Gaps = 36/195 (18%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + Y + + + + + A F P VA + + K Sbjct: 373 DPDALQHYYNRGLAYYQWGAYEPAIADFTTLITKGPPNAVAYRYRGNL-YTY--VNKPAL 429 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A + + I P+ + Y + G++YA Q K +Q S ++ S Sbjct: 430 AIADISKAIDLAPK-EAESYA--VRGLAYAL--------QADYKQAVQDFSTSIKLDPGS 478 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEAMA 231 LA K + Y AAI + + D + +E Sbjct: 479 --------KTIYVNRALAYKYLN---------NYKAAIKDYTQAIELDPNDVDVYKER-- 519 Query: 232 RLVEAYVALALMDEA 246 + Y + D A Sbjct: 520 --GKVYEQMGKKDLA 532 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 67/206 (32%), Gaps = 37/206 (17%) Query: 14 AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73 ++ L + +I+ L+ + DS+ Y + +LKE+++ Sbjct: 30 QAIRRMKYIPLKLVRNISGLLLL---TTTMAYGQTDSLLVHSRSTAYYAEGKSYLKEKDY 86 Query: 74 SKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 + A + F P + A F + A + + + N + Sbjct: 87 NAAIQSFTAAIAIHPTDSAYA-----NLGFAYIRKENDKNAFVALNKALDL---NGNYAW 138 Query: 133 VYYLVG----------MSYAQMIRDVPY-----DQRATKLMLQYMSRIVERYT------- 170 Y L G +S+ R + D + + ++ YT Sbjct: 139 AYCLRGYLYTKINVPELSFNDFSRAIALNAKGGDLSGAQNAVSD-KSVIRDYTKKIGKDP 197 Query: 171 --NSPYVKGARFYVTVGRNQLAAKEV 194 +S Y++ AR Y + +N+ A K+ Sbjct: 198 KDDSAYLQRARAYESREKNKQAVKDY 223 >gi|218439885|ref|YP_002378214.1| hypothetical protein PCC7424_2942 [Cyanothece sp. PCC 7424] gi|218172613|gb|ACK71346.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424] Length = 632 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 57/195 (29%), Gaps = 43/195 (22%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + + +A +N+ P A F Y+ GK ++A + I Sbjct: 169 GIALYNQGKLEEAIAAYNKAIEINP--NYAE-VYSNLGFALYNQGKLEEAIAAYNTAIEI 225 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 P + Y +G++ + Q + + + +E N Sbjct: 226 NPND---AFAYNNLGIALSN--------QGKLEEAIAAYNTAIEINPN------------ 262 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA-- 241 + A + + Y +G+ AI + + + AY+ L Sbjct: 263 ---DAFAYNNLGVALY--NQGKLEEAIAAYNTAIEINPNDAF----------AYIGLGIA 307 Query: 242 LMDEAREVVSLIQER 256 L D+ + ++ Sbjct: 308 LHDQGKLEEAIAAYN 322 Score = 43.2 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 16/130 (12%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 + + +++E+ E NF++A F Q + P A + + Sbjct: 16 VPPNPILAQNIDQLFEQGNAAQNEGNFTEAERIFRQVIKINPNNADAYRY---LGIALRN 72 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 GK ++A + I P N VY +G++ Q + + + + Sbjct: 73 QGKLEEAIAAYNTAIEINP---NYAEVYNNLGVALYY--------QGKLEEAIAAYNTAI 121 Query: 167 ERYTNSPYVK 176 E N Y + Sbjct: 122 EINPN--YAE 129 >gi|13929024|ref|NP_113917.1| serine/threonine-protein phosphatase 5 [Rattus norvegicus] gi|1709745|sp|P53042|PPP5_RAT RecName: Full=Serine/threonine-protein phosphatase 5; Short=PP5; AltName: Full=Protein phosphatase T; Short=PPT gi|663080|emb|CAA54454.1| protein phosphatase T (PPT) [Rattus norvegicus] gi|149056851|gb|EDM08282.1| protein phosphatase 5, catalytic subunit, isoform CRA_a [Rattus norvegicus] Length = 499 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 52/164 (31%), Gaps = 32/164 (19%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKS 96 + RD T ++ E+ +A + K +++ A ++++Q P +S Sbjct: 11 CAEPPRDEPPAEGT-LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS 69 Query: 97 LLMSAF----VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 A+ Y+ G +A L ++YI YY S + Sbjct: 70 ---LAYLRTECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL------- 109 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + L+ +V+ N A+ + K E Sbjct: 110 -GKFRAALRDYETVVKVKPNDK---DAKMKYQECSKIVKQKAFE 149 >gi|317009958|gb|ADU80538.1| putative paralysed flagella protein PflA; putative signal peptide [Helicobacter pylori India7] Length = 803 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 50/137 (36%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 188 PLLTTKGYDLNAYLEAKKQIHSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 247 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP N+ V Y V + + K ++Y RI+ Sbjct: 248 IKKSLLIDIGTKWIKNYPTDPNIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 299 Query: 168 RYTNSPYVKGARFYVTV 184 Y NS Y A+ + + Sbjct: 300 EYQNSRYAPLAQMRLAI 316 Score = 43.2 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPNIPEVLYY 276 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 277 VAKALDENNNYKQAMRYYKRILLEYQNSRYAPLAQMRLA 315 >gi|317060726|ref|ZP_07925211.1| tetratricopeptide repeat family protein [Fusobacterium sp. D12] gi|313686402|gb|EFS23237.1| tetratricopeptide repeat family protein [Fusobacterium sp. D12] Length = 917 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 24/70 (34%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ A + E+ + +A F +P A ++ A G + + Sbjct: 622 FQIADTYYNEKKYQEAANRFQDLFTTYPNGSYAEQARYWYANCLAMLGNQAAFVEEKQNF 681 Query: 121 ITQYPESKNV 130 + YP S V Sbjct: 682 MRDYPNSSFV 691 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 11/132 (8%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A+ + + N+ KA EY Q S F + A Y+ KYQ+AA+ ++ T Sbjct: 591 ALSYFRLGNYEKAREYNRQISDIAGFEEYGK---FQIADTYYNEKKYQEAANRFQDLFTT 647 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 YP + Y A + + ++ + Y NS +V+ Sbjct: 648 YPNGSYAEQARYWYANCLAMLGNQAAF--------VEEKQNFMRDYPNSSFVETLSSLDK 699 Query: 184 VGRNQLAAKEVE 195 ++ LA K++E Sbjct: 700 NLKSDLAKKKLE 711 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 47/134 (35%), Gaps = 22/134 (16%) Query: 139 MSYAQMIRDVPYDQRATKL-----MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 +S++ D R K LQ + ++ Y +S + RNQ Sbjct: 19 LSFSGEREDFQRIDRLYKERNFDAALQQSVQYIKNYPSSS-------RILEMRNQ----- 66 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +G+ Y + +Y A +F+ +L+ E L Y AL D+ R ++ I Sbjct: 67 --VGKLYFIQKDYGKAREQFRAILSMEPSGSTRNETYYYLARIYAALGEQDQNRFALTQI 124 Query: 254 QERYPQGYWARYVE 267 + P + Sbjct: 125 K---PSSSFYAKAH 135 Score = 35.9 bits (82), Expect = 6.5, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 75/224 (33%), Gaps = 35/224 (15%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + Y + YE A+ ++++ + +A + +SLL +A ++ Sbjct: 125 KPSSSFYAKAHYESAIQYMEKMKYQEAIQLLAVP--IHKKGDFYAESLLNTALAYFNQED 182 Query: 110 YQQAASLGEEYITQYP---ESKNVDYVYYLVGMSYAQMIRDVPYDQR---------ATKL 157 + + ++Y+ +Y + KN V YL G + + QR + Sbjct: 183 FVSS----KKYLLEYSSVEQHKNRSLVEYLYGTMLYKENKLSDSIQRLEALVQQDSTSLY 238 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-----IGRYYLKRGEYVAAIPR 212 + + ++E Y+N + + E IG Y+ R +Y Sbjct: 239 AKKAILTLIEIYSNQGDAAKVEEKLLKLQGT---PEYNRAMTMIGDLYVSRQQY------ 289 Query: 213 FQLVLANYSDAEHA--EEAMARLVEAYVALALMDEAREVVSLIQ 254 Q L Y+ + + + L + EA + ++ Sbjct: 290 -QKALEMYAKSNQQKDPRLLYGKAYSLYKLNRLQEALQAFEQLR 332 >gi|298480594|ref|ZP_06998791.1| TPR domain-containing protein [Bacteroides sp. D22] gi|298273415|gb|EFI14979.1| TPR domain-containing protein [Bacteroides sp. D22] Length = 590 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 36/198 (18%) Query: 61 YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y + ++ L ++ KA + FP SLL KY S Sbjct: 122 YSQGLVSLYQQQNELDKAVTLLEKMVTRFPSKQEPLFSLLDI---YSRQEKYNDVISTLN 178 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + +++ + + + Y QM D K Q + +V+ Y Sbjct: 179 RLEKRLGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVQEYP-------- 219 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + +V +G YL+ G+ A +Q VLA D A+ + Y Sbjct: 220 ---MDM------RYQVILGDVYLQNGKKQEAYDAYQKVLAIEPD---NPMALFSMASYYE 267 Query: 239 ALALMDEAREVVSLIQER 256 + ++ + + Sbjct: 268 QTGQKELYQQQLDTLLLN 285 >gi|257463131|ref|ZP_05627532.1| TPR repeat-containing protein [Fusobacterium sp. D12] Length = 915 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 24/70 (34%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ A + E+ + +A F +P A ++ A G + + Sbjct: 620 FQIADTYYNEKKYQEAANRFQDLFTTYPNGSYAEQARYWYANCLAMLGNQAAFVEEKQNF 679 Query: 121 ITQYPESKNV 130 + YP S V Sbjct: 680 MRDYPNSSFV 689 Score = 39.3 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 11/132 (8%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A+ + + N+ KA EY Q S F + A Y+ KYQ+AA+ ++ T Sbjct: 589 ALSYFRLGNYEKAREYNRQISDIAGFEEYGK---FQIADTYYNEKKYQEAANRFQDLFTT 645 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 YP + Y A + + ++ + Y NS +V+ Sbjct: 646 YPNGSYAEQARYWYANCLAMLGNQAAF--------VEEKQNFMRDYPNSSFVETLSSLDK 697 Query: 184 VGRNQLAAKEVE 195 ++ LA K++E Sbjct: 698 NLKSDLAKKKLE 709 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 47/134 (35%), Gaps = 22/134 (16%) Query: 139 MSYAQMIRDVPYDQRATKL-----MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 +S++ D R K LQ + ++ Y +S + RNQ Sbjct: 17 LSFSGEREDFQRIDRLYKERNFDAALQQSVQYIKNYPSSS-------RILEMRNQ----- 64 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +G+ Y + +Y A +F+ +L+ E L Y AL D+ R ++ I Sbjct: 65 --VGKLYFIQKDYGKAREQFRAILSMEPSGSTRNETYYYLARIYAALGEQDQNRFALTQI 122 Query: 254 QERYPQGYWARYVE 267 + P + Sbjct: 123 K---PSSSFYAKAH 133 Score = 35.9 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 75/224 (33%), Gaps = 35/224 (15%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + Y + YE A+ ++++ + +A + +SLL +A ++ Sbjct: 123 KPSSSFYAKAHYESAIQYMEKMKYQEAIQLLAVP--IHKKGDFYAESLLNTALAYFNQED 180 Query: 110 YQQAASLGEEYITQYP---ESKNVDYVYYLVGMSYAQMIRDVPYDQR---------ATKL 157 + + ++Y+ +Y + KN V YL G + + QR + Sbjct: 181 FVSS----KKYLLEYSSVEQHKNRSLVEYLYGTMLYKENKLSDSIQRLEALVQQDSTSLY 236 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-----IGRYYLKRGEYVAAIPR 212 + + ++E Y+N + + E IG Y+ R +Y Sbjct: 237 AKKAILTLIEIYSNQGDAAKVEEKLLKLQGT---PEYNRAMTMIGDLYVSRQQY------ 287 Query: 213 FQLVLANYSDAEHA--EEAMARLVEAYVALALMDEAREVVSLIQ 254 Q L Y+ + + + L + EA + ++ Sbjct: 288 -QKALEMYAKSNQQKDPRLLYGKAYSLYKLNRLQEALQAFEQLR 330 >gi|307718665|ref|YP_003874197.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192] gi|306532390|gb|ADN01924.1| TPR domain protein [Spirochaeta thermophila DSM 6192] Length = 654 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 70/215 (32%), Gaps = 40/215 (18%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYS 106 + + +++ + ++++ +A E + ++ F ++ A +S Sbjct: 13 VSPLAGEETSLQLFRQGEEARIQEDYHRAIELYQQAIQKNPAF----VQAYKGLAEAYFS 68 Query: 107 AGKYQQAASLGEEYITQYPESKN--VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 G+Y+ A + E+ + P S + + Y L+ + + + Sbjct: 69 LGQYEVALAGAEKAKSLDPRSTDNHLLYARCLLAL-------------GRLEEAERIYRD 115 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 I+ R + + I L RG+ +A+ ++ L + + Sbjct: 116 ILSREPQNVEAG-----------------MGIAELSLARGQVASALREYERTLRMFPE-- 156 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 ++ + L Y D+A + YP Sbjct: 157 -HKKILTILAFLYEYRGERDKAASYLEEALRLYPS 190 Score = 42.8 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 41/109 (37%), Gaps = 24/109 (22%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G++Q+A + ++ P+S+ +YL G+ ++ R + L+ ++E Sbjct: 240 GRFQEALDHLDGFLGARPDSREG---WYLKGVILDRLDR--------PEESLRAFREVLE 288 Query: 168 RYTNSPYVKGARFYVTV--------GRNQLAAKEVEIGR-----YYLKR 203 RY + + A + + R A R +Y +R Sbjct: 289 RYPDDEVARYAMERILLERFPVSAPERRAAAGYHFTRAREYAEKFYFRR 337 Score = 39.3 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 49/223 (21%), Positives = 79/223 (35%), Gaps = 30/223 (13%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRD 86 A C L + + +Y D ++ E A L L + A + + R Sbjct: 94 LLYARCLLALGRLEEAERIYRDILSREPQNVEAGMGIAELSLARGQVASALREYERTLRM 153 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 FP +K L + AF+ G+ +AAS EE + YP V+ L S+ +R Sbjct: 154 FPEH---KKILTILAFLYEYRGERDKAASYLEEALRLYPSDPE---VHLLAASSH---LR 204 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPY----VKGARFYVTVGRNQLAAKEVEIGR---- 198 +D A + + + + E + Y V + + L R Sbjct: 205 KEEWD-EAEREARRAL-TLDENAVEASYLLAQVATGKGRFQEALDHLDG--FLGARPDSR 260 Query: 199 --YYLK------RGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 +YLK ++ F+ VL Y D E A AM R+ Sbjct: 261 EGWYLKGVILDRLDRPEESLRAFREVLERYPDDEVARYAMERI 303 Score = 38.6 bits (89), Expect = 0.85, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 68/228 (29%), Gaps = 44/228 (19%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLG 117 +Y + +L L +A + P A + L A G+ A Sbjct: 95 LYARCLLAL--GRLEEAERIYRDILSREPQNVEAGMGIAELSLA-----RGQVASALREY 147 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E + +PE K + L +++ R D Y+ + Y + P V Sbjct: 148 ERTLRMFPEHKKI-----LTILAFLYEYRG-ERD-----KAASYLEEALRLYPSDPEV-- 194 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRG----------EYVAA-----IPRFQLVLANYSD 222 ++ + L +E + +R Y+ A RFQ L + Sbjct: 195 ---HLLAASSHLRKEEWDEAEREARRALTLDENAVEASYLLAQVATGKGRFQEALDHLDG 251 Query: 223 A----EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 + E L +E+ + ERYP ARY Sbjct: 252 FLGARPDSREGWYLKGVILDRLDRPEESLRAFREVLERYPDDEVARYA 299 >gi|256838586|ref|ZP_05544096.1| TPR domain-containing protein [Parabacteroides sp. D13] gi|256739505|gb|EEU52829.1| TPR domain-containing protein [Parabacteroides sp. D13] Length = 1186 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 58/177 (32%), Gaps = 26/177 (14%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + E ++P++++ YY V Y ++ T L +Y +++ Sbjct: 607 KLEDIPLSVEAFENLERRFPDNEHRLESYYQV---YLMALKT-----GNTALATEYKNKL 658 Query: 166 VERYTNSPYVKGAR--------FYVTVGRNQLAAKEVEIGRY--YLKRG-EYVAAIPRFQ 214 + + S Y + V ++ + Y YL+ YV F+ Sbjct: 659 MNAFPESDYAVAVADPNYEYNIRMMDVVQDS-----IYQATYDRYLESDTAYV--RKSFR 711 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 V Y A + M +YV + + + + E+YP ++K Sbjct: 712 YVSEKYPLATLMPKFMFLDALSYVQAGDAEGFKNALKALVEKYPNADVTELAGEMLK 768 >gi|237720355|ref|ZP_04550836.1| TPR domain-containing protein [Bacteroides sp. 2_2_4] gi|229450106|gb|EEO55897.1| TPR domain-containing protein [Bacteroides sp. 2_2_4] Length = 590 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 36/198 (18%) Query: 61 YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y + ++ L ++ KA + FP SLL KY S Sbjct: 122 YSQGLVSLYQQQNELDKAVTLLEKMVTRFPSKQEPLFSLLDI---YSRQEKYNDVISTLN 178 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + +++ + + + Y QM D K Q + +V+ Y Sbjct: 179 RLEKRLGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVQEYP-------- 219 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + +V +G YL+ G+ A +Q VLA D A+ + Y Sbjct: 220 ---MDM------RYQVILGDVYLQNGKKQEAYDAYQKVLAVEPD---NPMALFSMASYYE 267 Query: 239 ALALMDEAREVVSLIQER 256 + ++ + + Sbjct: 268 QTGQKELYQQQLDTLLLN 285 >gi|326335179|ref|ZP_08201376.1| tetratricopeptide (TPR) domain protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692709|gb|EGD34651.1| tetratricopeptide (TPR) domain protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 280 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 43/131 (32%), Gaps = 10/131 (7%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + D + Y + +++ + +A + ++ S P ++ +L Sbjct: 144 KIIKDYSSSKAANVAYYSAGMAYMQLNKYKEAVSHLDKFSSKDP--ILSALALGNIGDAF 201 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + +A ++ I +S N L Y V +Q+ K L+Y R Sbjct: 202 VQLKQLNEATDYYKKAIN---KSDNS-----LTAPIYLNKAAQVAVEQKNYKQALEYFER 253 Query: 165 IVERYTNSPYV 175 I + S Sbjct: 254 IKNDFPKSEEA 264 >gi|295086300|emb|CBK67823.1| Tetratricopeptide repeat. [Bacteroides xylanisolvens XB1A] Length = 590 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 36/198 (18%) Query: 61 YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y + ++ L ++ KA + FP SLL KY S Sbjct: 122 YSQGLVSLYQQQNELDKAVTLLEKMVTRFPSKQEPLFSLLDI---YSRQEKYNDVISTLN 178 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + +++ + + + Y QM D K Q + +V+ Y Sbjct: 179 RLEKRLGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVQEYP-------- 219 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + +V +G YL+ G+ A +Q VLA D A+ + Y Sbjct: 220 ---MDM------RYQVILGDVYLQNGKKQEAYDAYQKVLAVEPD---NPMALFSMASYYE 267 Query: 239 ALALMDEAREVVSLIQER 256 + ++ + + Sbjct: 268 QTGQKELYQQQLDTLLLN 285 >gi|254503302|ref|ZP_05115453.1| tol-pal system protein YbgF, putative [Labrenzia alexandrii DFL-11] gi|222439373|gb|EEE46052.1| tol-pal system protein YbgF, putative [Labrenzia alexandrii DFL-11] Length = 270 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 16/133 (12%), Positives = 43/133 (32%), Gaps = 14/133 (10%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 S+ D + + R Y++A +++ A F +P +A + Sbjct: 130 STDDDQIAGIIGSGDPRTDYDRAYSMAVNGDYAAAEAGFRTFLESYPDNQLAANAQYWLG 189 Query: 102 FVQYSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 + +++A + ++ +P + +G+S T + Sbjct: 190 ESLLAQQNFREA---ADAFLKTYRDHPGNSKSPDSLLKLGVSL--------RGLGETDVA 238 Query: 159 LQYMSRIVERYTN 171 S ++ ++ N Sbjct: 239 CATFSELLSKFPN 251 Score = 42.8 bits (100), Expect = 0.053, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 30/101 (29%), Gaps = 8/101 (7%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A+ G Y A + ++ YP+++ Y +G S Q+ + Sbjct: 150 DRAYSMAVNGDYAAAEAGFRTFLESYPDNQLAANAQYWLGESLLA--------QQNFREA 201 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + + + + + V L +V + Sbjct: 202 ADAFLKTYRDHPGNSKSPDSLLKLGVSLRGLGETDVACATF 242 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 13/103 (12%), Positives = 33/103 (32%), Gaps = 14/103 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 +E Y ++ A++++ + LA + A F Sbjct: 163 AAEAGFRTFLESYPDNQLAANAQYWLGE--SLLAQ------------QNFREAADAFLKT 208 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 ++ + +++ +L + L D A S + ++P Sbjct: 209 YRDHPGNSKSPDSLLKLGVSLRGLGETDVACATFSELLSKFPN 251 >gi|301307732|ref|ZP_07213689.1| TPR domain protein [Bacteroides sp. 20_3] gi|300834406|gb|EFK65019.1| TPR domain protein [Bacteroides sp. 20_3] Length = 1186 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 58/177 (32%), Gaps = 26/177 (14%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + E ++P++++ YY V Y ++ T L +Y +++ Sbjct: 607 KLEDIPLSVEAFENLERRFPDNEHRLESYYQV---YLMALKT-----GNTALATEYKNKL 658 Query: 166 VERYTNSPYVKGAR--------FYVTVGRNQLAAKEVEIGRY--YLKRG-EYVAAIPRFQ 214 + + S Y + V ++ + Y YL+ YV F+ Sbjct: 659 MNAFPESDYAVAVADPNYEYNIRMMDVVQDS-----IYQATYDRYLESDTAYV--RKSFR 711 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 V Y A + M +YV + + + + E+YP ++K Sbjct: 712 YVSEKYPLATLMPKFMFLDALSYVQAGDAEGFKNALKALVEKYPNADVTELAGEMLK 768 >gi|217977948|ref|YP_002362095.1| TPR repeat-containing protein [Methylocella silvestris BL2] gi|217503324|gb|ACK50733.1| TPR repeat-containing protein [Methylocella silvestris BL2] Length = 290 Score = 44.3 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 49/136 (36%), Gaps = 14/136 (10%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T + ++A+ ++ +N+++A ++ P A + A V++ + Sbjct: 165 TPSDTAALIMQRAMASVEAKNYTQALTLLDRLVAIAP--AWAE-AWNERATVRFMSEDAD 221 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + ++ + P L+GM + K L+ + + Y Sbjct: 222 GAMADIDKVLRLEPRHFGA-----LMGMGVILQRAGLD------KRALEAFEKALAVYPA 270 Query: 172 SPYVKGARFYVTVGRN 187 P +K + +++ N Sbjct: 271 QPGLKESVEKLSLDVN 286 >gi|313683216|ref|YP_004060954.1| hypothetical protein [Sulfuricurvum kujiense DSM 16994] gi|313156076|gb|ADR34754.1| Tetratricopeptide TPR_1 repeat-containing protein [Sulfuricurvum kujiense DSM 16994] Length = 436 Score = 44.3 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 17/82 (20%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK--- 109 D +E+Y+KA Q++ +AY + P + + G+ Sbjct: 20 DTLTMQELYQKANAAYAAQSYQEAYPLLEALNDQAPENPE----------INFLMGRCAL 69 Query: 110 ----YQQAASLGEEYITQYPES 127 Y +A + + + P Sbjct: 70 ELKLYDEAIAAFDRVLIINPNH 91 >gi|182419429|ref|ZP_02950681.1| TPR-repeat-containing protein [Clostridium butyricum 5521] gi|237666848|ref|ZP_04526833.1| TPR repeat protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376760|gb|EDT74332.1| TPR-repeat-containing protein [Clostridium butyricum 5521] gi|237658047|gb|EEP55602.1| TPR repeat protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 425 Score = 44.3 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 45/126 (35%), Gaps = 21/126 (16%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS------AGKYQ 111 + YE V + N++ A + + KS L V Y G Sbjct: 308 SKFYEYGVWYFNNGNYNSAKVELEKAYK------YCDKSDLKEHIVFYKGSTASQLGDNS 361 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 +A L +EY + YP+ ++ V Y + + +++ +Y +V Y N Sbjct: 362 EALKLYKEYYSLYPKGAYIEGVLYELALLTNTTNKNMGK---------EYARELVNNYPN 412 Query: 172 SPYVKG 177 S Y+ Sbjct: 413 SLYIND 418 >gi|145532302|ref|XP_001451912.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124419578|emb|CAK84515.1| unnamed protein product [Paramecium tetraurelia] Length = 1033 Score = 44.3 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 56/174 (32%), Gaps = 32/174 (18%) Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 +A S L ++ K ++A + Y +Y Y+ G+ + Sbjct: 116 EIATSSELDEGKRLFTENKVEEALKNFQNYQNKYGLHPE---ALYISGLCFM------TL 166 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-------------- 196 DQ + ++ S +++ + +++ +N L + + + Sbjct: 167 DQE--EKYIEQFSTLIKTFPRFKRTSYMYLALSLKKNNLINEAIHVISQGINHFNRYFEA 224 Query: 197 ----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 + +LK Y AI FQ + + L + Y + + +A Sbjct: 225 LIFRAKLFLKIKNYEKAIKDFQSAIQVNPNKSICY---VGLSDCYKQINQIQQA 275 >gi|325263638|ref|ZP_08130372.1| putative tetratricopeptide repeat [Clostridium sp. D5] gi|324031347|gb|EGB92628.1| putative tetratricopeptide repeat [Clostridium sp. D5] Length = 474 Score = 44.3 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 23/80 (28%), Gaps = 1/80 (1%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 +Y L N+ A + ++ R +LL G A+ Sbjct: 352 SACESLYSGGTASLDVANYDTAIDSLSKVVRMNEGYDDGG-ALLNLGIAYMRNGDNDNAS 410 Query: 115 SLGEEYITQYPESKNVDYVY 134 + I YP+++ Sbjct: 411 KYLKRVIELYPDTERAQEAQ 430 >gi|291521940|emb|CBK80233.1| hypothetical protein CC1_14520 [Coprococcus catus GD/7] Length = 522 Score = 44.3 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 11/89 (12%), Positives = 25/89 (28%), Gaps = 9/89 (10%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQ 104 + T +Y ++++ A + + + + ++ Sbjct: 369 IKEATKSSVTETLYANGKDSFDKKDYVGAIDGMTKVLRMDDSYSY------AVFYMGRSY 422 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYV 133 G AA + I YP S +D Sbjct: 423 QLLGDTGNAAGYYKRLIQSYPNSDLIDDA 451 >gi|296328452|ref|ZP_06870973.1| conserved hypothetical protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154418|gb|EFG95215.1| conserved hypothetical protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 417 Score = 44.3 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 7/65 (10%) Query: 214 QLVLANYSDAEHAE-------EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 ++ + N+ + E E + +Y L E + + L+++ +P WA+ Sbjct: 350 RVAIENFKKSLSTEKIQDKKPEIYYNIASSYAKLGNKVEVTKYLRLLKQEFPNSEWAKKS 409 Query: 267 ETLVK 271 E L K Sbjct: 410 EALTK 414 >gi|292493243|ref|YP_003528682.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus halophilus Nc4] gi|291581838|gb|ADE16295.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus halophilus Nc4] Length = 930 Score = 44.3 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 23/179 (12%), Positives = 69/179 (38%), Gaps = 33/179 (18%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + ++ L +++ KA F + + P + + ++ A Q+ AG ++ Sbjct: 712 EHPEVLAQEGWLAMRQNQPQKAVAAFKEALKHSPTS----QIIVNLALAQFQAGNQDRSL 767 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + E+++ ++P +++ Y + Y + ++ + + +++VE+ N+ Sbjct: 768 ATLEDWLKKHP--EDM-LAQYNLANLYLALKQE--------QEAVSAFAKVVEQAPNN-- 814 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 N LA + L++ + A+ + L ++ + + L Sbjct: 815 --------VTALNNLA--------WLLRKDDPAKALTYAERALDIAPNSPPVMDTLGML 857 >gi|194291771|ref|YP_002007678.1| hypothetical protein RALTA_B1012 [Cupriavidus taiwanensis LMG 19424] gi|193225675|emb|CAQ71621.1| conserved hypothetical protein; partial TRP motif [Cupriavidus taiwanensis LMG 19424] Length = 209 Score = 44.3 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 28/97 (28%), Gaps = 13/97 (13%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + L G + ++ +A L +A F Q + Sbjct: 14 LAVLASTAALLAGCATSN------PGPQSDESFKQSMSEAEAALASGQREQAINLFEQIA 67 Query: 85 RDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ P +R + + + A Y QA EE Sbjct: 68 KNNPTREEPWSRMAQIE-----FGAEHYPQAIVAAEE 99 >gi|158337251|ref|YP_001518426.1| Slt family transglycosylase [Acaryochloris marina MBIC11017] gi|158307492|gb|ABW29109.1| transglycosylase, SLT family [Acaryochloris marina MBIC11017] Length = 722 Score = 44.3 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 75/230 (32%), Gaps = 29/230 (12%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSA 107 T + Y + ++A ++ +P + +A ++ A Q A Sbjct: 77 QGTAQEQNQARYVLTADLINLGQGAEALQWLEGLEARYPLLGSHIA----VLQAEAQTLA 132 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMS----YAQMIRDVPYDQRATKLMLQYMS 163 G+ +QA + I YP+ +++G + Q I D P + K+ ++ + Sbjct: 133 GQTEQATKTWQRIIADYPQEPAAAEALFVLGQQKPELWQQAIADFPAHPKTVKIAVEQLK 192 Query: 164 RIVERYT-----------NSPYVKGARFYVTVGRNQLAAKEVEIGRY-YLKRGEYVAAIP 211 + ++ + Y + QL + +I + Y ++ Y Sbjct: 193 KKPKQLPLLMLIAEHGLFLTNYGDYLTQLTKEFKGQLKPADWQIIAFGYWEKQLYK---- 248 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + LA Y+ A + R +AR + YPQ Sbjct: 249 --EGALA-YAQAPQTSQTAYRGARGLQLGGEKKQARAAYQKMIAAYPQAK 295 >gi|119775219|ref|YP_927959.1| hypothetical protein Sama_2084 [Shewanella amazonensis SB2B] gi|119767719|gb|ABM00290.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 254 Score = 44.3 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 9/126 (7%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 YE+A+ LKE+ + +A F + +P + + + Y+ + +A Sbjct: 137 YEQAINLVLKERKYDEAIAAFRSFVKKYPGSNYTDNANYWLGQLLYNKNELDEARGAFTV 196 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + +YP+S +G+ + V ++++ Y NS + A+ Sbjct: 197 VVEKYPDSSKRGDSLVKLGLIAEKKGDTVG--------AKNLYRKVIKEYANSAAARIAQ 248 Query: 180 FYVTVG 185 + Sbjct: 249 QQLNAL 254 Score = 43.2 bits (101), Expect = 0.043, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 45/129 (34%), Gaps = 16/129 (12%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV-TVGRNQLAAKEVEIGR 198 + + ++ +R + V++Y S Y A +++ + N E++ Sbjct: 135 ASYEQAINLVLKERKYDEAIAAFRSFVKKYPGSNYTDNANYWLGQLLYN---KNELDEA- 190 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 RG F +V+ Y D+ +++ +L A+ + + + Y Sbjct: 191 ----RGA-------FTVVVEKYPDSSKRGDSLVKLGLIAEKKGDTVGAKNLYRKVIKEYA 239 Query: 259 QGYWARYVE 267 AR + Sbjct: 240 NSAAARIAQ 248 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 LK +Y AI F+ + Y + + + A L + +DEAR +++ E+YP Sbjct: 145 LKERKYDEAIAAFRSFVKKYPGSNYTDNANYWLGQLLYNKNELDEARGAFTVVVEKYPDS 204 Query: 261 YWARYVETLVK 271 + ++LVK Sbjct: 205 S--KRGDSLVK 213 >gi|237716625|ref|ZP_04547106.1| TPR domain-containing protein [Bacteroides sp. D1] gi|262405400|ref|ZP_06081950.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294647632|ref|ZP_06725200.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a] gi|294809152|ref|ZP_06767870.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC 1b] gi|229442608|gb|EEO48399.1| TPR domain-containing protein [Bacteroides sp. D1] gi|262356275|gb|EEZ05365.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292637020|gb|EFF55470.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a] gi|294443706|gb|EFG12455.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC 1b] Length = 590 Score = 44.3 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 36/198 (18%) Query: 61 YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y + ++ L ++ KA + FP SLL KY S Sbjct: 122 YSQGLVSLYQQQNELDKAVTLLEKMVTRFPSKQEPLFSLLDI---YSRQEKYNDVISTLN 178 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + +++ + + + Y QM D K Q + +V+ Y Sbjct: 179 RLEKRLGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVQEYP-------- 219 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + +V +G YL+ G+ A +Q VLA D A+ + Y Sbjct: 220 ---MDM------RYQVILGDVYLQNGKKQEAYDAYQKVLAVEPD---NPMALFSMASYYE 267 Query: 239 ALALMDEAREVVSLIQER 256 + ++ + + Sbjct: 268 QTGQKELYQQQLDTLLLN 285 >gi|188994836|ref|YP_001929088.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277] gi|188594516|dbj|BAG33491.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277] Length = 818 Score = 44.3 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 72/193 (37%), Gaps = 19/193 (9%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVA 93 GW +++ +D D ++ Y++ + ++ ++ +A + F++ + + +A + Sbjct: 107 GWYKKAIKDYSQAIELDDKFAHAYYDRGNAYCEKGSYEEAIKDFSKAIELNDKYTYAYHS 166 Query: 94 RKSLLMSAFV---QYSA--GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 R A+ Y Y QA L +++ Y + + Y+ G SY + I+D Sbjct: 167 R----GIAYCEKGSYKEAIKDYSQAIELDGKFVHAY-HGRGI--AYFKKG-SYEEAIKDY 218 Query: 149 PYDQRATKLMLQYMS-RIVERYTNSPYVKGARF--YVTVGRNQLAAKEVEIGRYYLKRGE 205 + R + + Y + + + A + G Y ++G Sbjct: 219 SQAIELDGKFVHAYHGRGIAYFKKGLYEEAIKDYSKAIELDGKFAHAYYDRGNAYCEKGS 278 Query: 206 YVAAIPRFQLVLA 218 Y AI + + Sbjct: 279 YEEAIKDYSKAIE 291 Score = 42.4 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 83/242 (34%), Gaps = 54/242 (22%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFP 88 C +VG ++ +D D ++ + + + + K+ ++ +A + ++ + + Sbjct: 34 GCCIVGSYEEAIKDYSKAIELDDKFVHAYHGRGIAYFKKGSYEEAIKDYSQAIELDDKYA 93 Query: 89 ------FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 ++K A Y QA L +++ + YY G +Y Sbjct: 94 PAYHGRGNAYSKKGWYKKA-----IKDYSQAIELDDKF----------AHAYYDRGNAYC 138 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR--------FYVTVGRNQLAAKEV 194 + + + ++ S+ +E Y +R Y ++ A E+ Sbjct: 139 EK--------GSYEEAIKDFSKAIELNDKYTYAYHSRGIAYCEKGSYKEAIKDYSQAIEL 190 Query: 195 EIGRY----------YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 + G++ Y K+G Y AI + + D + A AY L + Sbjct: 191 D-GKFVHAYHGRGIAYFKKGSYEEAIKDYSQAIEL--DGKFVH-AYHGRGIAYFKKGLYE 246 Query: 245 EA 246 EA Sbjct: 247 EA 248 >gi|116329905|ref|YP_799623.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116123594|gb|ABJ74865.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 1197 Score = 44.3 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 51/147 (34%), Gaps = 12/147 (8%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVAR 94 G ++ + + D + Y ++ + +++A F + + P F+ Sbjct: 757 SGNKKLAKEEFETAMQQDSANELAPYNIGIILFNDNLYNEAIAIFKEIIQKNPEFSD--- 813 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP-YDQR 153 + +++ Y G +QA + + KN L G+ + + Sbjct: 814 -AHYQISYIYYKRGDLEQAEKEIRKALDLERNEKN------LFGLIRILSEQKTKIANPA 866 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARF 180 K +L+ + E++ SP+ A Sbjct: 867 VKKEILELGRELAEKFPASPHATQAER 893 >gi|116329495|ref|YP_799215.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116122239|gb|ABJ80282.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 1197 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 51/147 (34%), Gaps = 12/147 (8%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVAR 94 G ++ + + D + Y ++ + +++A F + + P F+ Sbjct: 757 SGNKKLAKEEFETAMQQDSANELAPYNIGIILFNDNLYNEAIAIFKEIIQKNPEFSD--- 813 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP-YDQR 153 + +++ Y G +QA + + KN L G+ + + Sbjct: 814 -AHYQISYIYYKRGDLEQAEKEIRKALDLERNEKN------LFGLIRILSEQKTKIANPA 866 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARF 180 K +L+ + E++ SP+ A Sbjct: 867 VKKEILELGRELAEKFPASPHATQAER 893 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 25/138 (18%) Query: 64 AVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + + A + F D+ ++++ A V Y G Y+++ S+ E+ Sbjct: 279 GNARILTGEYEAALKAFESSLALKSDY------QEAISGIAAVHYKTGNYRKSVSVLEKS 332 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I+ +P + Y + L Y +R E +S + + Sbjct: 333 ISLFPNN-----AIYQ------NQMGLNMKALGEPAKALVYFTRAREL--DSAFAEPVTN 379 Query: 181 YVTVGRNQLAAKEVEIGR 198 V + +A + R Sbjct: 380 LVFLL---IAENRYKAAR 394 >gi|193214646|ref|YP_001995845.1| hypothetical protein Ctha_0933 [Chloroherpeton thalassium ATCC 35110] gi|193088123|gb|ACF13398.1| hypothetical protein Ctha_0933 [Chloroherpeton thalassium ATCC 35110] Length = 628 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 12/130 (9%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK--YQQAASL 116 + + + + + + A + ++ S + ++ ++ +L +A Sbjct: 503 QAFSRVKKLIAQNKRTAAADSLSEWSARYSYSSLSDHALFEKG---TLEADIAPARAVQT 559 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 E+ I +PES D S ++ + + + Y ++++ Y S YVK Sbjct: 560 FEKIIADFPESFFAD-------KSMFELGQLFEHTLNDNARAMSYYEKLIQNYPKSLYVK 612 Query: 177 GARFYVTVGR 186 AR + R Sbjct: 613 DARARLRALR 622 Score = 39.7 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 26/197 (13%), Positives = 59/197 (29%), Gaps = 47/197 (23%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + A L ++ +++A + VA++++L A + Sbjct: 284 LLNFANLAFAQKKYNEAVSAYESARARSTSGSVAQQAILGKAKAR--------------- 328 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 M+ A++ D Q+ T + VE Y +SP + Sbjct: 329 -------------------MALAKLSPDSASTQKLTDEAYSAYLQFVETYPSSPLMPRVL 369 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + E+ + + A+ Q + YS +A V Sbjct: 370 LKIAEVE----KNELH---------QPLIAMQTLQKLTKKYSSLPEVYQAEYDKASILVL 416 Query: 240 LALMDEAREVVSLIQER 256 + +A ++++ + E Sbjct: 417 QNDLPQAAQILTALSEN 433 >gi|121635128|ref|YP_975373.1| putative periplasmic protein [Neisseria meningitidis FAM18] gi|120866834|emb|CAM10592.1| putative periplasmic protein [Neisseria meningitidis FAM18] gi|325132380|gb|EGC55073.1| putative lipoprotein [Neisseria meningitidis M6190] gi|325136517|gb|EGC59121.1| periplasmic protein [Neisseria meningitidis M0579] gi|325138439|gb|EGC61005.1| putative lipoprotein [Neisseria meningitidis ES14902] gi|325198573|gb|ADY94029.1| hypothetical protein NMBG2136_1330 [Neisseria meningitidis G2136] Length = 238 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S V + +Y +A+ K FS A +A++S+ + + G Sbjct: 112 SAHTVETAQNLYNQALKHYKSGRFSAAASLLKGADGGD-GGSIAQRSMYLLLQSRARMGN 170 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168 + +G Y ++ +S + +G + +D+ +++ Sbjct: 171 CESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIAR---------ATWRSLIQA 221 Query: 169 YTNSP 173 Y +SP Sbjct: 222 YPSSP 226 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 18/43 (41%) Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + D+ A EAM ++ E L D AR + + YP Sbjct: 184 RFKDSPTAPEAMFKIGECQYRLQQKDIARATWRSLIQAYPSSP 226 >gi|15384002|gb|AAK96080.1|AF393466_14 Zn-dependent metalloprotease [uncultured crenarchaeote 74A4] Length = 509 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 11/79 (13%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 K+ L A + + G+Y+QA + E+ + P + + ++++ DV Sbjct: 45 EKTELDKAKIHFVNGEYKQAVRIYEQLLENNPNDTAI---LKMKAIAFSNSNDDVN---- 97 Query: 154 ATKLMLQYMSRIVERYTNS 172 L+ +I+++ NS Sbjct: 98 ----SLKDFYKIIQQDPNS 112 >gi|118353701|ref|XP_001010116.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89291883|gb|EAR89871.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 1875 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 63/188 (33%), Gaps = 24/188 (12%) Query: 74 SKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 +A +Y+ + P F + Y KY +A + ++ I P+S + Sbjct: 931 EEAIKYYKKAIEIDPNHFNT-----QFNLGLLYYQEQKYDEALTYFQKVIEINPKSPDS- 984 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--KGARFYVTVGRNQL 189 Y +G+ Y D+ L+Y + + A Y+ + Sbjct: 985 --YNNIGLIYY--------DKDMITEALEYFKKALHVDPQYQQAHHNSAVIYLQEINPKF 1034 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-RE 248 + +G +K+ I F+ ++ + + + +L Y + +EA + Sbjct: 1035 LESLINLGDICVKQNLLDEGIECFKKIIQIDPYSHYDQ---FQLALIYQKKYMNEEAVKA 1091 Query: 249 VVSLIQER 256 +I+ Sbjct: 1092 YKKVIKLN 1099 Score = 38.9 bits (90), Expect = 0.72, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 22/68 (32%), Gaps = 12/68 (17%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY--QQAASLGEEYIT 122 L E E F + + P++ + L + KY ++A ++ I Sbjct: 1048 QNLLDEG-----IECFKKIIQIDPYSHY-DQFQLALIY----QKKYMNEEAVKAYKKVIK 1097 Query: 123 QYPESKNV 130 P+ Sbjct: 1098 LNPQHTKA 1105 >gi|19703800|ref|NP_603362.1| hypothetical protein FN0465 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19713946|gb|AAL94661.1| Hypothetical protein FN0465 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 410 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 7/65 (10%) Query: 214 QLVLANYSDAEHAE-------EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 ++ + N+ + E E + +Y L E + + L+++ +P WA+ Sbjct: 343 RVAIENFKKSLSTEKIQDKKPEIYYNIASSYAKLGNKVEVTKYLRLLKQEFPNSEWAKKS 402 Query: 267 ETLVK 271 E L K Sbjct: 403 EALTK 407 >gi|125974865|ref|YP_001038775.1| TPR repeat-containing protein [Clostridium thermocellum ATCC 27405] gi|256003879|ref|ZP_05428866.1| Tetratricopeptide domain protein [Clostridium thermocellum DSM 2360] gi|281418669|ref|ZP_06249688.1| TPR repeat-containing protein [Clostridium thermocellum JW20] gi|125715090|gb|ABN53582.1| TPR repeat domain containing protein [Clostridium thermocellum ATCC 27405] gi|255992217|gb|EEU02312.1| Tetratricopeptide domain protein [Clostridium thermocellum DSM 2360] gi|281407753|gb|EFB38012.1| TPR repeat-containing protein [Clostridium thermocellum JW20] gi|316939076|gb|ADU73110.1| TPR repeat-containing protein [Clostridium thermocellum DSM 1313] Length = 246 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 32/71 (45%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 K +Y A+ L L Y + +A++ + + + D+A+E ++ I YP Sbjct: 171 YKNKKYSEAVKSLNLSLKLYDEDYYADDCYYFIAYSEYNIGNYDKAKEALNTIINNYPDS 230 Query: 261 YWARYVETLVK 271 + + + L++ Sbjct: 231 SYYKDAKDLLR 241 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 8/88 (9%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + Y KY +A + Y E D YY + S + + Sbjct: 167 GYENYKNKKYSEAVKSLNLSLKLYDEDYYADDCYYFIAYSEYNI--------GNYDKAKE 218 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQ 188 ++ I+ Y +S Y K A+ + + N+ Sbjct: 219 ALNTIINNYPDSSYYKDAKDLLRIIENK 246 >gi|281349619|gb|EFB25203.1| hypothetical protein PANDA_002014 [Ailuropoda melanoleuca] Length = 434 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 43/144 (29%), Gaps = 26/144 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109 E+ ++ KE + +A + + + A+K+ L A Sbjct: 273 ERGTVYFKEGKYKQAVLQYKKIVSWLEYESSFSNEDAQKAQALRLASHLNLAMCHLKLQA 332 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + D ++++ Y Sbjct: 333 FSAAIESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 381 Query: 170 TNSPYVKGARFYV--TVGRNQLAA 191 S A+ V R QLA Sbjct: 382 P-SNKAAKAQLAVCQQRIRKQLAR 404 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 2/78 (2%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYF 80 L ++A+C L ++ + ++ D ++ ++ + L +F A F Sbjct: 315 LRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADF 374 Query: 81 NQCSRDFPFAGVARKSLL 98 + + +P + A K+ L Sbjct: 375 QKVLQLYP-SNKAAKAQL 391 >gi|124266418|ref|YP_001020422.1| hypothetical protein Mpe_A1225 [Methylibium petroleiphilum PM1] gi|124259193|gb|ABM94187.1| hypothetical protein Mpe_A1225 [Methylibium petroleiphilum PM1] Length = 941 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 8/73 (10%) Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 Y+ A + + Y+ YP+ D V Y + + Q ++ L+ + R+V+ Sbjct: 105 DYRAAIASYQGYLKAYPKDPGNDRVLYQLARAQEQG--------GELEVALKTLDRLVQD 156 Query: 169 YTNSPYVKGARFY 181 Y + Y A F Sbjct: 157 YPQTAYRDEAHFR 169 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 39/121 (32%), Gaps = 19/121 (15%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG---------EY 206 + + + +E +P A + E+E KR +Y Sbjct: 57 EQAIAAYRKFLEVAPGAPQRAEAMRRLGDL-------EMESAD---KRSVEATATSGPDY 106 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 AAI +Q L Y + + +L A ++ A + + + + YPQ + Sbjct: 107 RAAIASYQGYLKAYPKDPGNDRVLYQLARAQEQGGELEVALKTLDRLVQDYPQTAYRDEA 166 Query: 267 E 267 Sbjct: 167 H 167 Score = 35.9 bits (82), Expect = 6.5, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 25/67 (37%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 ++ A + + +P + L A Q G+ + A + + YP++ D Sbjct: 105 DYRAAIASYQGYLKAYPKDPGNDRVLYQLARAQEQGGELEVALKTLDRLVQDYPQTAYRD 164 Query: 132 YVYYLVG 138 ++ G Sbjct: 165 EAHFRRG 171 Score = 35.5 bits (81), Expect = 9.2, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 32/99 (32%), Gaps = 6/99 (6%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 D R +Y+ A + A + ++ +D+P ++ + ++ Y Sbjct: 121 PKDPGNDRVLYQLARAQEQGGELEVALKTLDRLVQDYPQTAYRDEAHFRRGELLFTVRDY 180 Query: 111 QQAASLGEEYITQYPESKNVDY---VYYLVGMSYAQMIR 146 +A + + Y Y+ G S + R Sbjct: 181 AKAEQAYGTVLA---GDEEGPYQGRALYMQGWSRFKQGR 216 >gi|94968709|ref|YP_590757.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94550759|gb|ABF40683.1| TPR repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 1127 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 71/235 (30%), Gaps = 52/235 (22%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 AL+ F+IA D D + V + +Q KA E F+ Sbjct: 11 LALSCSFAIAA----------------DHKPDPAEAARLNNIGVALMNQQRMEKAVEKFD 54 Query: 82 -QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 +D + L + K ++ + + P++ V+Y +G+ Sbjct: 55 LALEKD----PKLSVAYLDKGIALLNLQKLPESEAALNKAGEAMPKNPR---VWYNLGL- 106 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 + ++ +R+ N IG Y Sbjct: 107 -------LNRGAGKYDAAIENFNRVTTIDPNDSDTF-----------------YMIGSLY 142 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 L+ +Y AI ++ L AE L +A ++EAR+ + + + Sbjct: 143 LQLQKYEDAIGAYKSALKINPLHASAE---FGLAKALQRAGKVEEARDHLHIFEH 194 >gi|30025849|gb|AAP04428.1| 34 kDa outer membrane protein [Coxiella burnetii] Length = 300 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 34/125 (27%), Gaps = 45/125 (36%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A+ L ++ + KA F Y Sbjct: 174 YRQALDLLTKKQYDKAQASFQ----------------------NYLND------------ 199 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP + +Y +G Y Q Q+ K + +++ S V A+ Sbjct: 200 ---YPNGSYIANAHYWLGEIYLQ--------QKDRKNAAHEFQTVRDKFPKSEKVLDAKL 248 Query: 181 YVTVG 185 + + Sbjct: 249 KLAII 253 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + Y N Y+ A +++ YL++ + A FQ V Sbjct: 188 KAQASFQNYLNDYPNGSYIANAHYWLGEI--------------YLQQKDRKNAAHEFQTV 233 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + +E +A +L + +A+E ++ I++++P+ A+ ++ Sbjct: 234 RDKFPKSEKVLDAKLKLAIIDAEDGKIKQAKEELTEIKKQHPESTAAQLANIRLQ 288 >gi|257456245|ref|ZP_05621442.1| putative lipoprotein [Treponema vincentii ATCC 35580] gi|257446331|gb|EEV21377.1| putative lipoprotein [Treponema vincentii ATCC 35580] Length = 489 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 67/204 (32%), Gaps = 43/204 (21%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + +YE+ V F + ++ +A E F + + P ++L+ V Y K + Sbjct: 158 DPDNVQALYEEGVDFYNQGSYKEAGETFGKILKKHP---DDIQALIWCGKVYYLDNKMTE 214 Query: 113 AASLGEEYITQYP-ESKNVDYVYYLVGMSY--AQMIRD----VPYDQRAT---------- 155 A + P S + + + + A+ I D + + A Sbjct: 215 AEECYRTALKYQPKNSLAIAELARIKSETNRMAEAITDIQKAIDLEPDAAPHWTDLGSYN 274 Query: 156 ------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 + L +R +E +S ++ Y+ + L KE A Sbjct: 275 LQIGRKEEALAAFNRAIELVPDSYFI---HIYLAGLNDDLGNKE--------------DA 317 Query: 210 IPRFQLVLANYSDAEHAEEAMARL 233 I ++ V Y A E + L Sbjct: 318 IKHYKKVTELYPQYYFAYEGLGIL 341 >gi|255321986|ref|ZP_05363136.1| TPR repeat-containing protein [Campylobacter showae RM3277] gi|255301090|gb|EET80357.1| TPR repeat-containing protein [Campylobacter showae RM3277] Length = 298 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 15/122 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY-----LKRGEY 206 Q + ++ + A+ ++ + + +Y ++ Y Sbjct: 185 QDVASEAKKLF--------DTGKLDDAKARYEYLLSK--DHKPAMANFYLGEIAYQQKAY 234 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 AI +Q + Y A++ + + ++ + A + ++ YP A+ Sbjct: 235 NNAIKYYQQSIQLYDKADYTPKLLYHTAISFDKIKDTASANKFYKALKLGYPDSKEAKAA 294 Query: 267 ET 268 T Sbjct: 295 PT 296 Score = 39.3 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 41/149 (27%), Gaps = 17/149 (11%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 V + + + ++V +A A + +A Sbjct: 163 VASSSPDAELQTPKTDFTKQKNQDVASEAKKLFDTGKLDDAKARYEYLLSKDHKPAMANF 222 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQ 152 L A Y Y A ++ I Y DY + Y +S+ ++ Sbjct: 223 YLGEIA---YQQKAYNNAIKYYQQSIQLY---DKADYTPKLLYHTAISFDKI-------- 268 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFY 181 + T ++ + Y +S K A Sbjct: 269 KDTASANKFYKALKLGYPDSKEAKAAPTR 297 >gi|163751255|ref|ZP_02158483.1| hypothetical protein KT99_13937 [Shewanella benthica KT99] gi|161328969|gb|EDQ00043.1| hypothetical protein KT99_13937 [Shewanella benthica KT99] Length = 231 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 38/109 (34%), Gaps = 14/109 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 QR + + S +++Y S Y A +++ + ++ A Sbjct: 124 QRKYEEAIPAFSGFIKQYPESTYAANANYWLGQLL--------------YNKSDFEPAKQ 169 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 F+ V+ + D+ +++ +L + + A+ + + Y Sbjct: 170 AFETVVNRFKDSNKRADSLVKLGMIAEKVGKVPSAKVYYQQVIKEYANS 218 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 22/124 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 KY++A +I QYPES Y +G + Q + Sbjct: 123 KQRKYEEAIPAFSGFIKQYPESTYAANANYWLGQLLYNKSD--------FEPAKQAFETV 174 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V R+ +S + + +A K +G+ +A +Q V+ Y+++ Sbjct: 175 VNRFKDSNKRADSLVKL----GMIAEK---VGKV-------PSAKVYYQQVIKEYANSAA 220 Query: 226 AEEA 229 A A Sbjct: 221 ARLA 224 >gi|67971760|dbj|BAE02222.1| unnamed protein product [Macaca fascicularis] Length = 613 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 36/299 (12%), Positives = 88/299 (29%), Gaps = 56/299 (18%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 217 QKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 276 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 277 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 329 Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157 ++ + +N V Y + Y Q++ VP D + Sbjct: 330 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVVPTDPQVLSKLGELYDHEG 389 Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196 QY + ++ + + A Y + + ++ + Sbjct: 390 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFEGASLIQPTQVKWQLMV 449 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + + G Y A+ ++ + + E + LV L L D A+E ++ Sbjct: 450 ASCFRRSGNYQKALDTYKDTHRKFPE---NVECLRFLVRLCTDLGLKD-AQEYARKLKR 504 >gi|323487064|ref|ZP_08092372.1| hypothetical protein HMPREF9474_04123 [Clostridium symbiosum WAL-14163] gi|323399565|gb|EGA91955.1| hypothetical protein HMPREF9474_04123 [Clostridium symbiosum WAL-14163] Length = 512 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 11/91 (12%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 ++L A+ +SAG+ +A S + ++ P++ V + MI Q Sbjct: 356 QTLEDLAYTMWSAGRLSEALSYYQTCLSIRPDNPKV--------IFNMAMIN---RSQGQ 404 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 T +Q +++V ++ +S Y AR + Sbjct: 405 TDTAVQLFTQVVTQFADSEYADRARSQLAEL 435 >gi|156741814|ref|YP_001431943.1| hypothetical protein Rcas_1834 [Roseiflexus castenholzii DSM 13941] gi|156233142|gb|ABU57925.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus castenholzii DSM 13941] Length = 593 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 66/222 (29%), Gaps = 36/222 (16%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-SAF 102 D D +++A F + Q + +A F + P LLM Sbjct: 360 DDFTRALALDPENAEAYHQRARAFYRLQQYDEAIRDFTEALARDPNND----VLLMRRGV 415 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 G+Y +A + ++ + P +V + YY + Q + Sbjct: 416 AYRDKGQYDEALADFDQSLQLNP---DVSFTYYHRAL-LFQATGRLER-------ARADF 464 Query: 163 SRIVERYTNSPYV-----------KGARFYVTVGRNQLAAKEVEIGRYYLKRGE------ 205 R + AR + + EI Y+ + Sbjct: 465 DRALTIAPEYRLAYVGRGGLRLEQGDARGALRDCTRAIELDATEIDAYFCRARAAIALRD 524 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 Y AA+ V+A D+ +A A+ AL DEAR Sbjct: 525 YRAAVADLDTVIARDPDS---ADAYRERGRAHQALRDTDEAR 563 >gi|298491867|ref|YP_003722044.1| tetratricopeptide repeat-containing protein ['Nostoc azollae' 0708] gi|298233785|gb|ADI64921.1| Tetratricopeptide TPR_2 repeat protein ['Nostoc azollae' 0708] Length = 743 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 20/157 (12%), Positives = 51/157 (32%), Gaps = 22/157 (14%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 + D T ++ V + + + L+ +N+ A F++ P Sbjct: 584 GVACGNLGKHQEAYNCFDKATQIKPDDGVAWFNRGLSLLELENYEDAISSFDKALEFQPN 643 Query: 90 AG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 + ++ + G+ +A + ++ + P + YY +A Sbjct: 644 SPKIWDKR-----GYTLVRLGQDDEAITNFDKALEINPHYPS---AYYNKAACFAL---- 691 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 QR L L+ + + ++ + Y + A + Sbjct: 692 ----QREVPLALENLQKAIQIKPS--YREDAATDIEF 722 >gi|256844835|ref|ZP_05550293.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] gi|294785884|ref|ZP_06751172.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27] gi|256718394|gb|EEU31949.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] gi|294487598|gb|EFG34960.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27] Length = 414 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 7/65 (10%) Query: 214 QLVLANYSDAEHAE-------EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 ++ + N+ + E E + +Y L E + + L+++ +P WA+ Sbjct: 350 RVAIENFKKSLSTEKIQDKKPEIYYNIASSYAKLGNKVEVTKYLRLLKQEFPNSEWAKRS 409 Query: 267 ETLVK 271 E L K Sbjct: 410 EALTK 414 >gi|145589353|ref|YP_001155950.1| cellulose synthase domain-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047759|gb|ABP34386.1| cellulose synthase operon C domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 1271 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 12/101 (11%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 LK + + A N+ P R L A + + +L ++++ ++ Sbjct: 543 RQALKAGDTNTAIALLNKAVELEPDDVWLR---LDLARLYAKINHPKDGIALFDQFVKKH 599 Query: 125 PESKNVDYVY--YLVGMSYAQ-------MIRDVPYDQRATK 156 P + Y Y YL G+ Q I + ++ Sbjct: 600 PNNVEGLYAYSLYLSGLDQNQAALKVLEQIPLADRTPKISR 640 >gi|327404519|ref|YP_004345357.1| hypothetical protein Fluta_2534 [Fluviicola taffensis DSM 16823] gi|327320027|gb|AEA44519.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola taffensis DSM 16823] Length = 1093 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 17/118 (14%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109 D Y YE A+ ++ +++ KA N F F + L K Sbjct: 56 DTAYALAQYEIALSEMQLEHYDKAQNILNDLLQYKIRFNF---KHRVYLTLGNCYDQNKK 112 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +A + E + YP N+ Y G++YA Q+ K + + ++ Sbjct: 113 PDEAIRVYNEGLKLYPYQHNL---LYNRGLAYAN--------QKKYKEAISDYKQAIQ 159 >gi|323694572|ref|ZP_08108738.1| hypothetical protein HMPREF9475_03602 [Clostridium symbiosum WAL-14673] gi|323501340|gb|EGB17236.1| hypothetical protein HMPREF9475_03602 [Clostridium symbiosum WAL-14673] Length = 512 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 11/91 (12%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 ++L A+ +SAG+ +A S + ++ P++ V + MI Q Sbjct: 356 QTLEDLAYTMWSAGRLSEALSYYQTCLSIRPDNPKV--------IFNMAMIN---RSQGQ 404 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 T +Q +++V ++ +S Y AR + Sbjct: 405 TDTAVQLFTQVVTQFADSEYADRARSQLAEL 435 >gi|283780487|ref|YP_003371242.1| Pyrrolo-quinoline quinone [Pirellula staleyi DSM 6068] gi|283438940|gb|ADB17382.1| Pyrrolo-quinoline quinone [Pirellula staleyi DSM 6068] Length = 1255 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ-RATKLMLQYMS 163 Y +G Y A ++ +E++ +YP N GM+ + + D D + K Q + Sbjct: 334 YRSGSYSTAIAVFDEFLKKYPSDPNSSLARVRRGMAQIRQVTDKASDPVQGLKAAQQVLP 393 Query: 164 RI 165 +I Sbjct: 394 QI 395 >gi|148974033|ref|ZP_01811566.1| hypothetical protein VSWAT3_12937 [Vibrionales bacterium SWAT-3] gi|145965730|gb|EDK30978.1| hypothetical protein VSWAT3_12937 [Vibrionales bacterium SWAT-3] Length = 656 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 32/116 (27%), Gaps = 24/116 (20%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----------------KAVLFLKEQNFS 74 +V Q + TD + ++Y+ K + K +F Sbjct: 325 CGLAVVLSFSQPNTAFASPWKTDDQLGYQLYQDEDFQQAAEQFQQQEWKGISQYKAGDFE 384 Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 A + + + A Q GKY QA + + P+ + Sbjct: 385 AAEQTLQGLTD--------ESARYNLANAQAQQGKYDQAIEEYQRILQNNPDHEYA 432 >gi|194367814|ref|YP_002030424.1| polysaccharide deacetylase [Stenotrophomonas maltophilia R551-3] gi|194350618|gb|ACF53741.1| polysaccharide deacetylase [Stenotrophomonas maltophilia R551-3] Length = 890 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 45/136 (33%), Gaps = 14/136 (10%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 +D + ++ ++ + +E+ + +A F + + P A ++ FV Y + Sbjct: 769 PASDRQRAQQANDRGLQLYREKQYDEAVAQFTEALKLRP--DFA-QAANNLGFVYYRQQR 825 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y +AA E + P ++Y + D ++ Q + + Sbjct: 826 YAEAARWLENTLKIDPS----------RAVAYLNL-GDAYFNAGDKAKAKQAYTTYLALQ 874 Query: 170 TNSPYVKGARFYVTVG 185 AR + Sbjct: 875 PQGSGAAQARAQLEKL 890 >gi|223938532|ref|ZP_03630424.1| TPR repeat-containing protein [bacterium Ellin514] gi|223892794|gb|EEF59263.1| TPR repeat-containing protein [bacterium Ellin514] Length = 432 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 54/160 (33%), Gaps = 31/160 (19%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + L+L ++++ A F + + P ++ + + Y +G Y++A S I Sbjct: 203 RGQLYLDKKDYPLAIRDFTKSTDLNPTNELSYEYR---GWAYYKSGAYEKAISDYSSAIQ 259 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 P ++ Y G++Y + + + SR ++ Sbjct: 260 LNPA-ESAAYGS--RGLAYEKS--------GELEKAIADYSRGIKLNPT----------- 297 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 N +A Y K+G++ I ++ + Sbjct: 298 ----NVIALHARAAA--YHKQGKFDRVIEDYREAIKRKPT 331 >gi|42525963|ref|NP_971061.1| TPR domain-containing protein [Treponema denticola ATCC 35405] gi|41816013|gb|AAS10942.1| TPR domain protein [Treponema denticola ATCC 35405] Length = 992 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 24/207 (11%), Positives = 62/207 (29%), Gaps = 44/207 (21%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF---- 102 D + + +Y + + ++ A + F P + A+ Sbjct: 101 EKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVLDIKP-----DDA---LAYNHLG 152 Query: 103 -VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 V + Y +A + + P + + ++ +++ K + Sbjct: 153 SVYFLCKDYPKALETYKIGLKVDPNHPFL----------NFNLA-ELYKEEKHYKEAINS 201 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 ++ N LA I Y++ E AI +++++ + Sbjct: 202 YQTAMKTKPN-------------WYEALA----AIADCYVEMEELGKAIETYKMIIGS-- 242 Query: 222 DAEHAEEAMARLVEAYVALALMDEARE 248 +EE +L + Y + +A + Sbjct: 243 -TGQSEENFTKLAKLYEKIHEDKDAED 268 >gi|46447180|ref|YP_008545.1| hypothetical protein pc1546 [Candidatus Protochlamydia amoebophila UWE25] gi|46400821|emb|CAF24270.1| unknown protein [Candidatus Protochlamydia amoebophila UWE25] Length = 896 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 31/105 (29%), Gaps = 12/105 (11%) Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 +++ N + + + L KE ++ AA F Y Sbjct: 477 KTLLKTSPNFD--QKTNEKILKLQGILLTKE----------NDWKAAYNHFSDFFKYYPH 524 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 + E + + + L +E + + YPQ +A Sbjct: 525 SIEIGEILFWMADCCSHLNNEQVRQEHLRTLYLNYPQSPFAAPAY 569 >gi|325142635|gb|EGC65026.1| putative lipoprotein [Neisseria meningitidis 961-5945] Length = 238 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S V + +Y +A+ K FS A +A++S+ + + G Sbjct: 112 SAHTVETAQNLYNQALKHYKSGRFSAAASLLKGADGGD-GGSIAQRSMYLLLQSRARMGN 170 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168 + +G Y ++ +S + +G + +D+ +++ Sbjct: 171 CESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIAR---------ATWRSLIQA 221 Query: 169 YTNSP 173 Y +SP Sbjct: 222 YPSSP 226 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 18/43 (41%) Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + D+ A EAM ++ E L D AR + + YP Sbjct: 184 RFKDSPTAPEAMFKIGECQYRLQQKDIARATWRSLIQAYPSSP 226 >gi|257094060|ref|YP_003167701.1| tetratricopeptide repeat-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046584|gb|ACV35772.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 784 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 79/238 (33%), Gaps = 43/238 (18%) Query: 30 IAVCFLVGWERQSSRDVYLDSVT-------DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 +A C L+G R+ D + + ++ ++A E + Sbjct: 526 VAACRLLGSIASERREWERAENAYARATQLDGKLADDWVALGQARVQRGKAAEAAEALQR 585 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSY 141 P G A ++L G Y +A GE P DY + G S Sbjct: 586 ALAINPSQGTAYQALSAL---HGRRGDYTKALEYGERATQLEPT----DYQAWSNKGYSL 638 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 ++ R + + + A ++ +G ++A +++ Sbjct: 639 LKLQR--------PGEAVPAFETALRLKPDF-----ANAWINLGEAKIAQRQM------- 678 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 GE +AA+ + + + A +A L AY+ ARE +L+ E+ PQ Sbjct: 679 --GEAIAALRKALEL------SPGASDARLYLTSAYIGAGQFALAREQATLLAEKVPQ 728 >gi|218441259|ref|YP_002379588.1| hypothetical protein PCC7424_4354 [Cyanothece sp. PCC 7424] gi|218173987|gb|ACK72720.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424] Length = 304 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 6/114 (5%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAAS 115 R Y + + + N+ KA E + Q + + ++L+ + G +QQA + Sbjct: 136 RAYYNQGLAYFALANYEKAVENYEQALLSSDSSSASVQALIYTDKGLTYFRLGNHQQAIT 195 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 E I P+++ YY G I D LQ + E Y Sbjct: 196 DLNEAIRLSPDNEK---AYYHRG-CVYSKIGDYRAALTDLTQALQLNYQFSEAY 245 Score = 38.9 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 26/210 (12%), Positives = 63/210 (30%), Gaps = 32/210 (15%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEY 79 K + + + L Q+++ ++T E Y + + + N+ +A Sbjct: 64 KLISAAYSNRCLINLQLGNNQAAKSDCTTALTLNSNNVETYLNEGLAEYRLGNYPEAINQ 123 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY-YL-V 137 + + ++ ++ Y++A E+ + S Y Sbjct: 124 YQEVIER---NKYDYRAYYNQGLAYFALANYEKAVENYEQALLSSDSSSASVQALIYTDK 180 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 G++Y ++ + + ++ + ++ G Sbjct: 181 GLTYFRL--------GNHQQAITDLNEAIRLSPDNEKAY-----------------YHRG 215 Query: 198 RYYLKRGEYVAAIPRFQLVLA-NYSDAEHA 226 Y K G+Y AA+ L NY +E Sbjct: 216 CVYSKIGDYRAALTDLTQALQLNYQFSEAY 245 >gi|91202613|emb|CAJ72252.1| Hypothetical Protein kustd1507 [Candidatus Kuenenia stuttgartiensis] Length = 700 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 26/69 (37%), Gaps = 3/69 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +LK+ N A + + +P A + F+ ++++A S ++ + Sbjct: 548 NLGSAYLKKGNPDAAIAQYRKALYIYPG--YAE-AHSNLGFIYTETNRFEEALSELKKAL 604 Query: 122 TQYPESKNV 130 P+ N Sbjct: 605 RLNPDHANA 613 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 70/227 (30%), Gaps = 54/227 (23%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ- 123 L+ ++ Y ++ + +++ P A Y G +A E + Sbjct: 415 RTVLRNNDWRDEYTFWTKIAKEQPDNHDAHN---NLGVFYYKHGDLDRAIGELERAVLLK 471 Query: 124 --YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV------ 175 YPE N +G Y D+ T + S+ + S Y Sbjct: 472 NDYPEGHNS------LGTMYI--------DKGLTDKAISEFSKAIHYDPASSYAYYNMGN 517 Query: 176 ----KGARFYVTVGRNQLAAKEVE-------IGRYYLKRGEYVAAIPRFQLVLANYSD-- 222 K A V N+ + +G YLK+G AAI +++ L Y Sbjct: 518 AYFDKNALDECIVFFNKAIQLNMHKPQVFNNLGSAYLKKGNPDAAIAQYRKALYIYPGYA 577 Query: 223 ------------AEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 EEA++ L +A L L + + + Y Sbjct: 578 EAHSNLGFIYTETNRFEEALSELKKA---LRLNPDHANAHNNLGALY 621 >gi|116747525|ref|YP_844212.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116696589|gb|ABK15777.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB] Length = 567 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 67/203 (33%), Gaps = 36/203 (17%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAAS 115 +Y KA +FL + + +A + + P F + L A+V + + A Sbjct: 181 PVALYYKARVFLDMKLYKQAEKIYLDVLAIEPAF----ENASLDLAYVYEVTERLKDAEQ 236 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + ++ P + N +G Y + R L++ S +++ Sbjct: 237 TYLQILSANPANVN---ARTRLGNLYMRQDRPA--------EALRHFSHLLKL-----NR 280 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 K + VG L K+ Y AI F +L D ++A+ L Sbjct: 281 KDVESRLKVGIIHLQQKD------------YEEAIKDFTYLLK---DEPQYDQALYYLAS 325 Query: 236 AYVALALMDEAREVVSLIQERYP 258 Y ++A LI P Sbjct: 326 TYAEKQDFEQAIRNFRLIARSSP 348 >gi|88801803|ref|ZP_01117331.1| tetratricopeptide repeat domain protein [Polaribacter irgensii 23-P] gi|88782461|gb|EAR13638.1| tetratricopeptide repeat domain protein [Polaribacter irgensii 23-P] Length = 605 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 55/172 (31%), Gaps = 29/172 (16%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL---KEQNFSKAYEYFNQCSRD- 86 A L+ + + LD+ + E A L + +N +A Sbjct: 443 AATQLIANDAAALYLKILDNEPIDSIPSGLTEFAHAELLEFQNKN-KEALTSLENLFTRK 501 Query: 87 --FPFA------GVAR----KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 FP + ++ L+ K+++A + I + D +Y Sbjct: 502 DIFPNGLIPSEVIYSDVLFLQAKLLL-----KQKKHEEAIAALSHIIRGDSQFFLADTIY 556 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 +++ +Y D + T +Y +I+ Y S YV AR R Sbjct: 557 FMIAETYYN-------DLKKTSKAQEYYQKIIFEYPGSIYVIDAREKYRSVR 601 >gi|291567436|dbj|BAI89708.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 883 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 43/152 (28%), Gaps = 28/152 (18%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + + + + +A + P + S A Y + +A ++ I+ Sbjct: 364 GKILVNQNRYEQAIYQYQILVNQNPDSQWFYGS---LADACYQNQDWLKALENYQKAISI 420 Query: 124 YPESK--------------NVDYVY--YLVGMS------YAQMIRDVPYDQRATKLMLQY 161 ++D Y ++ Y + I +V Q+ + L+ Sbjct: 421 NSNHDWFYNGLGNCLQKLGDLDQAIEAYRNAINIKNCTWYYEEIINVFMSQQKWEEALKV 480 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 ++ N A + + L E Sbjct: 481 CFESLKNDPNH---YQAYTQIKLNLKHLGRHE 509 Score = 39.3 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 78/257 (30%), Gaps = 65/257 (25%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++++A+ +L+E F +A Q + P + + + + A + ++ Sbjct: 14 LHQQAIAYLEEGKFDEAIAKCQQVIQQQP--EW-VMAYKTLGLALQKSNRLEAAENAYKK 70 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP------ 173 I N+ Y +G YAQ Q + + + + N Sbjct: 71 AINL---DPNLVAAYGNLGSLYAQ--------QGRWEEAETTLKQAINIDPNFRGVYRNL 119 Query: 174 --------YVKGARFY------VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 + A+ Y + Q +E++IG + G++ A+ FQ +A Sbjct: 120 ARVLTQRGRPEEAQIYWKRGLQLDGILKQRGQEELQIGNTLAEAGKWSEAVSAFQKAIAY 179 Query: 220 YSD---------------------AEHAEEAMAR----------LVEAYVALALMDEARE 248 + E+A+A L EA+ AL A Sbjct: 180 HPQLFLAHHKLGLGLMQLNQPAEAVSAFEKAIAIQPDFSWSHHHLGEAFQALNQPALAVS 239 Query: 249 VVSLIQERYPQGYWARY 265 P W+ Y Sbjct: 240 AFRKAIAINPDFCWSYY 256 >gi|218290407|ref|ZP_03494537.1| Tetratricopeptide TPR_2 repeat protein [Alicyclobacillus acidocaldarius LAA1] gi|218239535|gb|EED06729.1| Tetratricopeptide TPR_2 repeat protein [Alicyclobacillus acidocaldarius LAA1] Length = 636 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 47/110 (42%), Gaps = 11/110 (10%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + FL+ F A E+ Q P + +A ++ L A+ Y G+Y +A ++ E + Sbjct: 217 QDGRYFLEHGQFEVAVEWLEQVVAADP-SHIAARNNLSLAY--YYTGQYDKALAMAESVL 273 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + P++ L + ++ D+ + ++ + +++ + + Sbjct: 274 ERQPDN--------LHALCNRALLLQHFGDEERLRRAVEPLLKVIPLHPD 315 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 82/217 (37%), Gaps = 33/217 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +E+ + FL+ + ++A + F + P V A V G ++ + L Y Sbjct: 79 FERGMRFLQRNDLARAVKAFQRTVEYEPDNPVN---YCNLAGVLAELGDFEASNELL-HY 134 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + ++ ++ ++ + +YA + +++ R ++ + Y A Sbjct: 135 VLEH-MDPHMSECWFYLANNYANL--------GDYDAAEEHLLRYLDIDPDGEYAAEAEE 185 Query: 181 YVTVGRNQLAA-----------------KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 +++ ++ + ++ GRY+L+ G++ A+ + V+A D Sbjct: 186 MLSILIDEFGGGRALERRRREEARAETMQAIQDGRYFLEHGQFEVAVEWLEQVVAA--DP 243 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 H A L AY D+A + + ER P Sbjct: 244 SHIA-ARNNLSLAYYYTGQYDKALAMAESVLERQPDN 279 >gi|299137408|ref|ZP_07030590.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8] gi|298600813|gb|EFI56969.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8] Length = 793 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 47/288 (16%), Positives = 82/288 (28%), Gaps = 97/288 (33%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP- 88 I +C E ++ Y+ D + + + + ++ A FN+ P Sbjct: 494 ILLCLHRYSEAIAAEKKYVTLAPDEPNPYD--SLGMAYQQSGDYPNAILQFNKALSLNPQ 551 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI--------------------------- 121 F +++ V Y G++ +A L + YI Sbjct: 552 FEP----AIIHMGDVYYQTGQFDKAIELYQHYIQVTRTEDAQALGYEDLATVYLAMKKMP 607 Query: 122 ----------TQYPES---------KNVDYVYYLVGMSYAQMI---------RDVPYDQR 153 P + K DY S+ + I R P DQR Sbjct: 608 EAEQAATLGLKSNPNAVWPSLVIALKKSDY----KTESHLEQILFKNIPTQERGTPGDQR 663 Query: 154 --------------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 T+ L +E S + + + LA E+++GR Sbjct: 664 TKFYYLGYIDLHKGNTQQALADFKTALEHLPPSS-------GMDIYEDCLANAELQLGR- 715 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 Y A + +L + E L EA +A +DE + Sbjct: 716 ------YEEAAVEYNRILKLNPNYPQTRE---HLAEAETHIARVDEKQ 754 Score = 43.2 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 79/247 (31%), Gaps = 67/247 (27%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--RKSLLMSAFVQ------------- 104 +Y + + + + +A + + + +P A R + L A Sbjct: 420 LYVNSWYAISKGDVKEAEQTLTRITELYPQETEAYWRLARLSRADEHPAEGIEILKRGLA 479 Query: 105 YSAGK----------------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 YS Y +A + ++Y+T P+ N Y +GM+Y Q D Sbjct: 480 YSPNDKNLNNTLGFILLCLHRYSEAIAAEKKYVTLAPDEPN-PYDS--LGMAY-QQSGDY 535 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 P + ++ + + +G Y + G++ Sbjct: 536 P-------NAILQFNKALSLNPQFEPAI-----------------IHMGDVYYQTGQFDK 571 Query: 209 AIPRFQLVLANYSDAEHAEEAMAR----LVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 AI + +Y E+A A L Y+A+ M EA + +L + P W Sbjct: 572 AI----ELYQHYIQVTRTEDAQALGYEDLATVYLAMKKMPEAEQAATLGLKSNPNAVWPS 627 Query: 265 YVETLVK 271 V L K Sbjct: 628 LVIALKK 634 >gi|260598133|ref|YP_003210704.1| tetratricopeptide repeat protein [Cronobacter turicensis z3032] gi|260217310|emb|CBA31285.1| Uncharacterized protein yciM [Cronobacter turicensis z3032] Length = 381 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 42/189 (22%) Query: 64 AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + +A + FNQ DF + + + A +Q+A E + Sbjct: 106 GRDYMAAGLYDRAEDMFNQLVDETDFRIGALQQLLQIYQA-----TSDWQKAIDAAERLV 160 Query: 122 TQYPESKNVDYVYY-----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 E + V+ ++ L MS M R + + + NS Sbjct: 161 KLGKEHQRVEIAHFYCELALQAMSNEDMDR-----------AMSLLKKGAAADRNS---- 205 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 A + +GR ++ RG+Y A+ + V++ D E E + L Sbjct: 206 -------------ARVSIMMGRIFMTRGDYAHAVEMLEKVIS--QDRELVSETLEMLQVC 250 Query: 237 YVALALMDE 245 Y L E Sbjct: 251 YQQLGKPAE 259 >gi|312886007|ref|ZP_07745635.1| Tetratricopeptide TPR_2 repeat protein [Mucilaginibacter paludis DSM 18603] gi|311301544|gb|EFQ78585.1| Tetratricopeptide TPR_2 repeat protein [Mucilaginibacter paludis DSM 18603] Length = 205 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 13/111 (11%) Query: 53 DVRYQREVYEK-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAG 108 DV + Y K L + +F +A + + +L M + Y + Sbjct: 16 DVAQAQNAYVKLGQQALMDGDFKQAVRHLEKACVVDST------NANALWMLGYSYYHSE 69 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y++A S + + P + YY M+ + RDV + L Sbjct: 70 NYKKAISTYCKVVEIKPTDCS---AYYYRAMAKSYSARDVQATPADKEKFL 117 >gi|225621426|ref|YP_002722685.1| putative TPR domain-containing protein [Brachyspira hyodysenteriae WA1] gi|225216247|gb|ACN84981.1| putative TPR domain-containing protein [Brachyspira hyodysenteriae WA1] Length = 817 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 59/139 (42%), Gaps = 15/139 (10%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFP 88 IA+ + + ++S + + ++ + E+Y +++ ++ + KA EY+N+ P Sbjct: 523 IALAEMSLEDYKNSLEDFNKALELGYDEAEIYINIGLIYSRQAVYDKAIEYYNKVLEINP 582 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 + AF + KY++A + ++ I YP + + VYY G + + + Sbjct: 583 N---KVNAYYNIAFSLSNMDKYEEALEIYDKVIRMYPGNFD---VYYERGYTKYRASK-- 634 Query: 149 PYDQRATKLMLQYMSRIVE 167 + ++ I+ Sbjct: 635 ------YEEAVRDFDIIIN 647 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 17/124 (13%), Positives = 45/124 (36%), Gaps = 14/124 (11%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 +D + Y++ + L N+ +A E F + + S + Sbjct: 60 KDFERAIELGDDSETVYYDRGLAKLYLGNYEEAIEDFKRVLKI---NNNDTDSRVNIGLC 116 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 KY++A ++ +E I +P++ + Y G+ + + + + + Sbjct: 117 YLYMKKYKEAINIYDEVIANFPDNISS---YNNRGLCKFYLSQ--------FEEAINDFN 165 Query: 164 RIVE 167 +++E Sbjct: 166 KVIE 169 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 57/172 (33%), Gaps = 45/172 (26%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-------Y 110 E+ KA + + + K+ EY ++ + + ++ G Y Sbjct: 6 EELLNKAKDAFENKEYEKSIEYIDKVI-FYNGDSY---------DLYHNRGLSKLNLRLY 55 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 ++A E I + + VYY G++ + + ++ R+++ Sbjct: 56 EEAIKDFERAIEL---GDDSETVYYDRGLAKLYL--------GNYEEAIEDFKRVLK--- 101 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 N V IG YL +Y AI + V+AN+ D Sbjct: 102 --------------INNNDTDSRVNIGLCYLYMKKYKEAINIYDEVIANFPD 139 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 92/276 (33%), Gaps = 46/276 (16%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE-------- 70 L K AL + C E ++ + + ++ + E+Y++A+ +L + Sbjct: 355 LVKRALRDYEGALSCLNKILEIDNTDVSIYNEIALIKIELELYDEALYYLNKALDIDTNN 414 Query: 71 --------------QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +N+ +A FN+ +A + Y Y+ + Sbjct: 415 AEIYNSIGLVYHYKKNYEEAIRNFNKAIELN--TSMAS-AYYNIGLAYYEMHDYENSIQY 471 Query: 117 GEEYITQYPESKNVDYVY------------YLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + + P+ + Y Y + Y + ++ D + Sbjct: 472 YNKALEINPQYAS---AYINLGLIKHNLGNYKEAIDYYKKALEINPDYSLAYYNIALAEM 528 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +E Y NS ++ + +G ++ A + IG Y ++ Y AI + VL + Sbjct: 529 SLEDYKNS--LEDFNKALELGYDE-AEIYINIGLIYSRQAVYDKAIEYYNKVLEINPNKV 585 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 +A + + + +EA E+ + YP Sbjct: 586 NAY---YNIAFSLSNMDKYEEALEIYDKVIRMYPGN 618 >gi|190576474|ref|YP_001974319.1| putative polysaccharide deacetylase family protein [Stenotrophomonas maltophilia K279a] gi|190014396|emb|CAQ48044.1| putative polysaccharide deacetylase family protein [Stenotrophomonas maltophilia K279a] Length = 890 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 45/136 (33%), Gaps = 14/136 (10%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 +D + ++ ++ + +E+ + +A F + + P A ++ FV Y + Sbjct: 769 PASDRQRAQQANDRGLQLYREKQYDEAVAQFTEALKLRP--DFA-QAANNLGFVYYRQQR 825 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y +AA E + P ++Y + D ++ Q + + Sbjct: 826 YAEAARWLENTLKIDPS----------RAVAYLNL-GDAYFNAGDKAKAKQAYTTYLALQ 874 Query: 170 TNSPYVKGARFYVTVG 185 AR + Sbjct: 875 PQGSGAAQARAQLEKL 890 >gi|172039046|ref|YP_001805547.1| hypothetical protein cce_4133 [Cyanothece sp. ATCC 51142] gi|171700500|gb|ACB53481.1| unknown [Cyanothece sp. ATCC 51142] Length = 168 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 24/67 (35%), Gaps = 2/67 (2%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRD-FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y++ L + + + + P + + + L K A +L EE Sbjct: 12 YQQGQALLDRGQYRSSVKTLEEAKSLVNPSSKLGGEVQLSLVTAYQGVDKLDDAIALCEE 71 Query: 120 YITQYPE 126 +T++P Sbjct: 72 -LTRHPN 77 >gi|300867655|ref|ZP_07112302.1| hypothetical protein OSCI_3440027 [Oscillatoria sp. PCC 6506] gi|300334366|emb|CBN57474.1| hypothetical protein OSCI_3440027 [Oscillatoria sp. PCC 6506] Length = 1196 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 13/112 (11%), Positives = 38/112 (33%), Gaps = 16/112 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + V +A + + P A + + G++++A + ++ Sbjct: 702 YNRGVALFNLGRNEEAIASYEKVIEFKPDDYYAWN---NRGWALQNLGQFEEAIASYDKV 758 Query: 121 ITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 I P+ + +Y G++ + R+ + + + +E + Sbjct: 759 IEFKPDKHE----AWYNRGVALFNLGRN--------EEAIASYEKAIEIKPD 798 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 59/182 (32%), Gaps = 29/182 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y + V +A + + P + + ++ + G++++A + + Sbjct: 770 YNRGVALFNLGRNEEAIASYEKAIEIKPDFYEAWFTRGIV-----LFKLGRFEEALASYD 824 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + I P+ + G + ++ R K L + +E + Y Sbjct: 825 KAIEIKPDDHE---AWNNRGWALGEL--------RRFKEALTSCDKAIEIKADYHYAW-- 871 Query: 179 RFYVTVGRNQLAAKEVEIGRYY----LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 RN L E I Y +K Y A R + + EEA+A L Sbjct: 872 NNRGWALRN-LGRFEEAIASYNKALEIKPDHYEAWNNRGVAL----QNLGRFEEALASLD 926 Query: 235 EA 236 +A Sbjct: 927 KA 928 >gi|325105836|ref|YP_004275490.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter saltans DSM 12145] gi|324974684|gb|ADY53668.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter saltans DSM 12145] Length = 283 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 22/126 (17%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNS---------PYVKGARFYVTVGRNQL--A 190 Q D Q T+ + ++ +E S YV G + + L Sbjct: 136 YQNFPDTTSVQGLTEKAIHAYNKALELNAESLDAQTGLGIAYVTGTNNPMQGIQLLLKVV 195 Query: 191 AKE-------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 K+ + +G + +K G++ A+ RF+ V+ + EA + +Y + + Sbjct: 196 EKDPENLKANMSLGLFSMKSGQFGKAVDRFKTVVK----VKKDPEAYFYMATSYENMGMK 251 Query: 244 DEAREV 249 A E Sbjct: 252 TAAVEA 257 >gi|254473133|ref|ZP_05086531.1| TPR repeat:Molluscan rhodopsin C-terminal domain protein [Pseudovibrio sp. JE062] gi|211957854|gb|EEA93056.1| TPR repeat:Molluscan rhodopsin C-terminal domain protein [Pseudovibrio sp. JE062] Length = 295 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 27/89 (30%), Gaps = 8/89 (8%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 +S + + G Y A + ++ YP+ + + +G S QR Sbjct: 170 PQSDYNAIYGLMVGGNYPAATEGFDTFLGMYPDHELTANAQHWLGESLLA--------QR 221 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + Q + + S + + Sbjct: 222 QYENAAQAFLKSYTDFPESELAPESLLKL 250 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 14/101 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + Y + A+ ++ + LA +Y A F Sbjct: 188 AATEGFDTFLGMYPDHELTANAQHWLGE--SLLAQ------------RQYENAAQAFLKS 233 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 ++ ++E A E++ +L A + A E + + Sbjct: 234 YTDFPESELAPESLLKLGTALTGMGNAPAACETYEQLLANF 274 >gi|193216265|ref|YP_001997464.1| tetratricopeptide domain-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193089742|gb|ACF15017.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium ATCC 35110] Length = 365 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 47/154 (30%), Gaps = 19/154 (12%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLD-------SVTDVRYQREVYEKAVLFLKEQ 71 + + AL + +A + + + L + + RE L+ K + Sbjct: 1 MLRIALILVMFLASAPIYALQEPLPSSLELRREVDRIMEMEPEKAAREFIRLGELYFKHK 60 Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 + KA F + P K+ Y Y A + YI S N Sbjct: 61 KYEKAAVLFEAATTKNPTG----KAFFNLGSAYYMMQAYDDAINA---YIYAVKISPNYA 113 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 YY +G++Y Q K Y+ + Sbjct: 114 EGYYNLGLAYYQSGNFYS-----AKDAFAYVVEL 142 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 C +G ++ + + D + Y + + + + + KA N+ + Sbjct: 156 ACVRIGLDKSAVDAYQKAADLDPNFIDAYYNLGLSYKRLEQYDKAVAALNKAVQI---GA 212 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 AG QA + + Y +G+S+ + YD Sbjct: 213 NDPAIFFSLGECYQGAGDNNQAIVAFQNAFKLNSNDPEI---LYQIGVSHVNLE---EYD 266 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q ++ + A +G Y K +Y A+ Sbjct: 267 Q-----AIRAFGSALR-----------------MNKDFAECYYNLGIIYTKTHKYQNALY 304 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 ++ V+ + A L AY+ + AR + Sbjct: 305 AYEQVVRIQPE---NRTAYYNLGVAYINAGDTESARRTYKSL 343 >gi|149918345|ref|ZP_01906836.1| hypothetical protein PPSIR1_36557 [Plesiocystis pacifica SIR-1] gi|149820871|gb|EDM80280.1| hypothetical protein PPSIR1_36557 [Plesiocystis pacifica SIR-1] Length = 786 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 45/153 (29%), Gaps = 17/153 (11%) Query: 34 FLVGWERQSSRDVYLDS--VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 L + S DV + S V R Y A L + + A F ++ FP Sbjct: 218 ALASLDSVSPLDVPMSSGGVGAQWRVRAAYMAATASLAKGDIDDALTRFGLLTQSFPKGE 277 Query: 92 ----VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 + + L A + + G+ + A +S Y + Sbjct: 278 RDKRIVELANLALARIHHDQGETELAVKSYRRISR---DSPFFPEAMYETAWTLLAA--- 331 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 A LQ + ++ +SP V + Sbjct: 332 -----GAHDRALQALDLLLVYDPDSPIVPEIKQ 359 >gi|34763427|ref|ZP_00144375.1| hypothetical protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886896|gb|EAA24020.1| hypothetical protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 407 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 7/65 (10%) Query: 214 QLVLANYSDAEHAE-------EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 ++ + N+ + E E + +Y L E + + L+++ +P WA+ Sbjct: 343 RVAIENFKKSLSTEKIQDKKPEIYYNIASSYAKLGNKVEVTKYLRLLKQEFPNSEWAKRS 402 Query: 267 ETLVK 271 E L K Sbjct: 403 EALTK 407 >gi|315185805|gb|EFU19571.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta thermophila DSM 6578] Length = 654 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 27/204 (13%), Positives = 68/204 (33%), Gaps = 40/204 (19%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +++ + ++++ +A E + ++ F ++ A +S G+Y+ A + Sbjct: 24 QLFRQGEEARIQEDYHRAIELYQQAIQKNPAF----VQAYKGLAEAYFSLGQYEVALAGA 79 Query: 118 EEYITQYPESKN--VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 E+ + P S + + Y L+ + + + I+ R + Sbjct: 80 EKAKSLDPRSTDSHLLYARCLLAL-------------GRLEEAERIYRDILSREPQNVEA 126 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + I L RG+ +A+ ++ L + + ++ + L Sbjct: 127 G-----------------MGIAELSLARGQVASALREYERTLRMFPE---HKKILTILAF 166 Query: 236 AYVALALMDEAREVVSLIQERYPQ 259 Y D+A + YP Sbjct: 167 LYEYRGERDKAASYLEEALRLYPS 190 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 42/112 (37%), Gaps = 25/112 (22%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G++Q+A + ++ P+S+ +YL G+ ++ R + L+ ++E Sbjct: 240 GRFQEALDHLDGFLGARPDSREG---WYLKGVVLDRLDR--------PEESLRAFREVLE 288 Query: 168 RYTNSPYVKGARFYVTV--------GRNQLAAKEV-----EIGRYYLKRGEY 206 RY + + A + + R A ++Y +R Y Sbjct: 289 RYPDDEVARYAMERILLERFPASAPERRTAADYHFTQAGEYAEKFYFQR-AY 339 Score = 39.7 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 68/228 (29%), Gaps = 44/228 (19%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLG 117 +Y + +L L +A + P A + L A G+ A Sbjct: 95 LYARCLLAL--GRLEEAERIYRDILSREPQNVEAGMGIAELSLA-----RGQVASALREY 147 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E + +PE K + L +++ R D Y+ + Y + P V Sbjct: 148 ERTLRMFPEHKKI-----LTILAFLYEYRG-ERD-----KAASYLEEALRLYPSDPEV-- 194 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRG----------EYVAA-----IPRFQLVLANYSD 222 ++ + L +E + +R Y+ A RFQ L + Sbjct: 195 ---HLLAASSHLRKEEWDEAEREARRALTLDENAVEASYLLAQVATGKGRFQEALDHLDG 251 Query: 223 A----EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 + E L +E+ + ERYP ARY Sbjct: 252 FLGARPDSREGWYLKGVVLDRLDRPEESLRAFREVLERYPDDEVARYA 299 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 49/223 (21%), Positives = 79/223 (35%), Gaps = 30/223 (13%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRD 86 A C L + + +Y D ++ E A L L + A + + R Sbjct: 94 LLYARCLLALGRLEEAERIYRDILSREPQNVEAGMGIAELSLARGQVASALREYERTLRM 153 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 FP +K L + AF+ G+ +AAS EE + YP V+ L S+ +R Sbjct: 154 FPEH---KKILTILAFLYEYRGERDKAASYLEEALRLYPSDPE---VHLLAASSH---LR 204 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPY----VKGARFYVTVGRNQLAAKEVEIGR---- 198 +D A + + + + E + Y V + + L R Sbjct: 205 KEEWD-EAEREARRAL-TLDENAVEASYLLAQVATGKGRFQEALDHLDG--FLGARPDSR 260 Query: 199 --YYLK------RGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 +YLK ++ F+ VL Y D E A AM R+ Sbjct: 261 EGWYLKGVVLDRLDRPEESLRAFREVLERYPDDEVARYAMERI 303 >gi|218247206|ref|YP_002372577.1| lytic transglycosylase catalytic subunit [Cyanothece sp. PCC 8801] gi|218167684|gb|ACK66421.1| Lytic transglycosylase catalytic [Cyanothece sp. PCC 8801] Length = 730 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 63/208 (30%), Gaps = 46/208 (22%) Query: 100 SAFVQYSAGKYQQAASLGE-------------EYITQYPE--SKNVDYVYYLVGMSYAQM 144 A ++ Y +AA + P +K Y + Sbjct: 240 IADGYWAVEDYYKAALAYQKAPSTAQNLYRIGRGQQLQPNGNNKATVQAAYQKLLVAFPQ 299 Query: 145 IRDVPYD-QRATKL-----MLQYMSRIVERYTNSPYVKGARFYVTVGRNQL--------- 189 + QR +L + Y+ +++ ++ A ++L Sbjct: 300 APEAALALQRLAQLSQPETAISYLDQLINKFP--EQAGDALVKKAELLDKLNRQGEATKI 357 Query: 190 --------------AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 A I + +RG+ + A Q ++ N ++ A +A + + Sbjct: 358 RQTLLSKYAKSDATAEYRWLIAQKAAERGDALKAWTWAQPIVVNNPESPLAPKAGFWVGK 417 Query: 236 AYVALALMDEAREVVSLIQERYPQGYWA 263 L ++EA + R+PQ Y+A Sbjct: 418 WAQQLGRLEEAETAFEYVVTRHPQSYYA 445 >gi|222054188|ref|YP_002536550.1| hypothetical protein Geob_1089 [Geobacter sp. FRC-32] gi|221563477|gb|ACM19449.1| conserved hypothetical protein [Geobacter sp. FRC-32] Length = 149 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 3/73 (4%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMDEAREVVSLIQERYPQ 259 G+Y AI RF VL+++ ++ A EA+ + Y +E + YP Sbjct: 77 FDNGDYNDAILRFNEVLSSHRNSGAAPEALYLTGVSRYKTSHNAGNLKETYQRLAAEYPA 136 Query: 260 GYWARYV--ETLV 270 W + L+ Sbjct: 137 SEWVKRASPYNLL 149 Score = 42.8 bits (100), Expect = 0.057, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 29/85 (34%), Gaps = 7/85 (8%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 LL + G Y A E ++ + S YL G+S + + Sbjct: 69 LLGLGKADFDNGDYNDAILRFNEVLSSHRNSGAAPEALYLTGVSRYKTSHN-------AG 121 Query: 157 LMLQYMSRIVERYTNSPYVKGARFY 181 + + R+ Y S +VK A Y Sbjct: 122 NLKETYQRLAAEYPASEWVKRASPY 146 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 7/84 (8%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS---- 106 + + +++ A FN+ +G A ++L ++ +Y Sbjct: 60 PPEELVPSLLLGLGKADFDNGDYNDAILRFNEVLSSHRNSGAAPEALYLTGVSRYKTSHN 119 Query: 107 AGKYQQAASLGEEYITQYPESKNV 130 AG ++ + +YP S+ V Sbjct: 120 AGNLKE---TYQRLAAEYPASEWV 140 >gi|88602778|ref|YP_502956.1| TPR repeat-containing serine/threonine protein protein kinase [Methanospirillum hungatei JF-1] gi|88188240|gb|ABD41237.1| serine/threonine protein kinase with TPR repeats [Methanospirillum hungatei JF-1] Length = 862 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 50/168 (29%), Gaps = 31/168 (18%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + A + + +Y ++ + ++ + YP + G S + Sbjct: 720 QIGLARLYFKQKRYWESIEICDKILATYPGLPK---ALFYKGESLYA----IERVP---- 768 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 LQ I + + ++ R YLK G+Y A V Sbjct: 769 EALQSFLDICNNHPD---------HLQSCVK--------AARCYLKLGDYTEADKYITGV 811 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 + EA+ V + EAR + I P+ WA+ Sbjct: 812 IEKDET---IIEALRIKVFILLKRGAKAEARLYLDKILVIDPENEWAQ 856 >gi|150009734|ref|YP_001304477.1| TPR domain-containing protein [Parabacteroides distasonis ATCC 8503] gi|255012976|ref|ZP_05285102.1| TPR domain-containing protein [Bacteroides sp. 2_1_7] gi|149938158|gb|ABR44855.1| TPR domain protein [Parabacteroides distasonis ATCC 8503] Length = 1186 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 58/177 (32%), Gaps = 26/177 (14%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + E ++P++++ YY V Y ++ T L +Y +++ Sbjct: 607 KLEDIPLSVEAFENLERRFPDNEHRLESYYQV---YLMALKT-----GNTVLATEYKNKL 658 Query: 166 VERYTNSPYVKGAR--------FYVTVGRNQLAAKEVEIGRY--YLKRG-EYVAAIPRFQ 214 + + S Y + V ++ + Y YL+ YV F+ Sbjct: 659 MNAFPESDYAVAVADPNYEYNIRMMDVVQDS-----IYQATYDRYLESDTAYV--RKSFR 711 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 V Y A + M +YV + + + + E+YP ++K Sbjct: 712 YVSEKYPLATLMPKFMFLDALSYVQAGDAEGFKNALKALVEKYPNADVTELAGEMLK 768 >gi|308389544|gb|ADO31864.1| putative periplasmic protein [Neisseria meningitidis alpha710] gi|325130519|gb|EGC53274.1| putative lipoprotein [Neisseria meningitidis OX99.30304] gi|325201863|gb|ADY97317.1| putative lipoprotein [Neisseria meningitidis M01-240149] gi|325208385|gb|ADZ03837.1| putative lipoprotein [Neisseria meningitidis NZ-05/33] Length = 238 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 11/130 (8%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S V + +Y +A+ K FS A +A++S+ + + G Sbjct: 112 SAHTVETAQNLYNQALKHYKSGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 170 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168 + +G Y ++ +S + +G + +D+ +++ Sbjct: 171 CESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIAR---------ATWRSLIQA 221 Query: 169 YTNSPYVKGA 178 Y SP K A Sbjct: 222 YPGSPAAKRA 231 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 20/48 (41%) Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 + D+ A EA+ ++ E L D AR + + YP A+ Sbjct: 184 RFKDSPTAPEAIFKIGECQYRLQQKDIARATWRSLIQAYPGSPAAKRA 231 >gi|88811526|ref|ZP_01126781.1| Peptidase M48, Ste24p [Nitrococcus mobilis Nb-231] gi|88791415|gb|EAR22527.1| Peptidase M48, Ste24p [Nitrococcus mobilis Nb-231] Length = 485 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 58/175 (33%), Gaps = 27/175 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR----KSLLMSAFVQYSAGKYQQAASL 116 Y A+ +++A + R A + + A A + +QA + Sbjct: 312 YGLALALQHTGEYARARTILLRLLRTH--GEYAPYFVGLAEVSRA-----AKQPEQALTA 364 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 E ++ +P+ DY L + + D+ + + + +V + + Sbjct: 365 VREGLSLFPD----DYA--LRVL-----HVETLLDEGHAQQAQRIATTVVSDHPEDANLW 413 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-----NYSDAEHA 226 Q ++ +G YY RG+ +A+ + + VL Y + Sbjct: 414 QLVARAADSAGQQVQAQLAMGHYYYLRGDIPSALEQIKHVLESSKADEYQKSRAT 468 >gi|237741500|ref|ZP_04571981.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] gi|229429148|gb|EEO39360.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] Length = 414 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 7/65 (10%) Query: 214 QLVLANYSDAEHAE-------EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 ++ + N+ + E E + +Y L E + + L+++ +P WA+ Sbjct: 350 RVAIENFKKSLSTEKIQDKKPEIYYNIASSYAKLGNKVEVTKYLRLLKQEFPNSEWAKRS 409 Query: 267 ETLVK 271 E L K Sbjct: 410 EALTK 414 >gi|187736127|ref|YP_001878239.1| type II and III secretion system protein [Akkermansia muciniphila ATCC BAA-835] gi|187426179|gb|ACD05458.1| type II and III secretion system protein [Akkermansia muciniphila ATCC BAA-835] Length = 833 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 68/229 (29%), Gaps = 51/229 (22%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE------VYEKAVLFLKEQNFSKAY-- 77 I ++AV + + + R + + + +A E + +A Sbjct: 7 IAMALAVAGIGAGQGLAQEGAGAARRAAARMEEQAQASMLLLGQARQQYSEGKYQEALDN 66 Query: 78 --EYFNQC--------SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 R F +A + + A AG+Y +A L E+ + P+ Sbjct: 67 YRRSLTALPKSPNMEKRRRFLETSIA-DASVAVAQEYIKAGRYDEAVKLLEDALKSTPDH 125 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 + A+ ++ D T L +VK N Sbjct: 126 ------------ALARRTLEIARDPVRTNPALS---------P--EHVKNVEE-----VN 157 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 +L + + Y + G+Y AA+ F VL A M + A Sbjct: 158 RL----LHLAFGYYELGQYDAALKEFTSVLKTDPYNTAARRGMELVNRA 202 Score = 38.6 bits (89), Expect = 0.96, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 35/127 (27%), Gaps = 31/127 (24%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + L R + SP +A V + + Y+K G Y A+ + Sbjct: 61 QEALDNYRRSLTALPKSP---NMEKRRRFLETSIADASVAVAQEYIKAGRYDEAVKLLED 117 Query: 216 VLANYSDAEHAEEAMAR---------------------------LVEAYVALALMDEA-R 247 L + D A + L Y L D A + Sbjct: 118 ALKSTPDHALARRTLEIARDPVRTNPALSPEHVKNVEEVNRLLHLAFGYYELGQYDAALK 177 Query: 248 EVVSLIQ 254 E S+++ Sbjct: 178 EFTSVLK 184 >gi|118091214|ref|XP_420968.2| PREDICTED: similar to KIAA0155 [Gallus gallus] Length = 1265 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 98/276 (35%), Gaps = 39/276 (14%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 A L RA E + ++T +++A + E + +Y + + + + Y Sbjct: 574 ASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYL 633 Query: 63 K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + + NF +A ++F + ++D P + L A ++ E Sbjct: 634 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 687 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSPY 174 + Q P ++N Y +G + Q + D+ R L +++ + Y Sbjct: 688 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLY 746 Query: 175 VKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVL 217 + Y R+ A +E + + Y+++ +Y++A+ ++ L Sbjct: 747 AANGIGAVLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCL 806 Query: 218 ANY---SDAEHAEEAMARLVEAYVALALMDEAREVV 250 + + E + L A + E ++ + Sbjct: 807 RKFYKHQNT----EVLLYLARALFKCGKLQECKQTL 838 >gi|317486631|ref|ZP_07945448.1| N-acetylmuramoyl-L-alanine amidase [Bilophila wadsworthia 3_1_6] gi|316922014|gb|EFV43283.1| N-acetylmuramoyl-L-alanine amidase [Bilophila wadsworthia 3_1_6] Length = 558 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 47/111 (42%), Gaps = 8/111 (7%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + + Q + E+Y A F + +LA + + L++ AA+ Sbjct: 69 REPWEKLAQSFFDLHEKYPRWRNRPAALFRSALAMEELAKRSM------LRQDA-QAAVD 121 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAY-VALALMDEAREVVSLIQERYPQGY 261 R+ + L +Y+ A++A+ + A+E ++ IQ +YP+G Sbjct: 122 RYGVFLKSYASHVLADDALFGIARIKAERFNDFSGAQEALNTIQNQYPRGD 172 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 24/189 (12%), Positives = 56/189 (29%), Gaps = 46/189 (24%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK-----------EQN 72 L + F++A+ + D+ ++++ YEKA ++ + Sbjct: 23 LLVAFALALFVTA----------FSDAHAAPSFEQQ-YEKAKQDMEFLKSDSKRGGWREP 71 Query: 73 FSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQ-------QAASLGEE---Y 120 + K + F +P + +L SA + A + + + Sbjct: 72 WEKLAQSFFDLHEKYP--RWRNRPAALFRSALA---MEELAKRSMLRQDAQAAVDRYGVF 126 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + Y D + + A+ D + ++ I +Y A+ Sbjct: 127 LKSYASHVLADDALFGIARIKAERFNDFSG-------AQEALNTIQNQYPRGDVAPEAKL 179 Query: 181 YVTVGRNQL 189 Y + L Sbjct: 180 YAQRLKAAL 188 >gi|124009354|ref|ZP_01694032.1| TPR repeat [Microscilla marina ATCC 23134] gi|123985016|gb|EAY24967.1| TPR repeat [Microscilla marina ATCC 23134] Length = 220 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 21/182 (11%), Positives = 57/182 (31%), Gaps = 39/182 (21%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K TI F C L D+ + E+ ++ ++ + A + + Sbjct: 2 KLTQTICFLGIACLLFLRVSVVPGQTDNDTPPPEKSVAELLKEGEAKYQKGDILGAIKNY 61 Query: 81 NQCSRDFPFAGVARK--------------------------SLLMSAFV-----QYSAGK 109 N ++ +A + S L +A++ + Sbjct: 62 NAVIEKQAYSAIAYQKRARCKRRIQNYPGAIKDYEKAIQLKSELANAYIGKAQTYVAMKN 121 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 +++A + P K + ++Y G+++ ++ + K + ++ +E + Sbjct: 122 HKKAIKDYARALDLQPPKKYLPLIHYNKGLAHLEI--------KDYKEAMTDFNKAIELH 173 Query: 170 TN 171 Sbjct: 174 PK 175 >gi|328952823|ref|YP_004370157.1| Extracellular ligand-binding receptor [Desulfobacca acetoxidans DSM 11109] gi|328453147|gb|AEB08976.1| Extracellular ligand-binding receptor [Desulfobacca acetoxidans DSM 11109] Length = 614 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 66/212 (31%), Gaps = 46/212 (21%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPE-----SKNVDYV-YY------LVGMSYAQ 143 +LL A Y A +Y +A + E+Y+ P+ + Y L + + Sbjct: 39 ALLQQADNFYRAHRYNEALATYEQYLQTSPQGVQWQHAWLRTAELYGIKGDWLQARARYE 98 Query: 144 MIRDVPYDQRATKLM-------------LQYMSRIVERYTNSPYVKGARFYVTVG----- 185 I VP D RI+E T S RF Sbjct: 99 RILAVPVDSGLALKARYGVGQAQYKLGNFLEAERILENLTASNLSGDLRFKTNALLTELS 158 Query: 186 -----------RNQLAAKEVEIGR--YYLKRGEYV---AAIPRFQLVLANYSDAEHAEEA 229 R L K++ G +Y + AA P + + Y D Sbjct: 159 LQSRNFPQACSRLLLVEKDLPYGEEEWYQDLKSRLLERAAAPELEKLADLYRDTPLTPAL 218 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + +L+ ++A E ++ +Q R+PQ Sbjct: 219 LLQLIRLETQAGRPEKAEEWLATLQRRFPQSP 250 >gi|225871857|ref|YP_002753311.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196] gi|225793226|gb|ACO33316.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196] Length = 436 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 51/198 (25%), Gaps = 34/198 (17%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 E ++A + + P M A +G +AA+L + I P + + Sbjct: 261 EGKLTEAIASLEKLHQLHPHNP---TVANMLADAYLQSGDMDKAAALYPQVIAAQPGNTD 317 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + + Q+ + + ++ A V N+ Sbjct: 318 --------ALDSYGQVLIR---QKRFPEAVSTFQQALKAQPGDI---DALSGVAFASNET 363 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 + EI A R QL + + L AY L +A Sbjct: 364 GQYQQEIA----------ALEQRAQL-------TPNTPATLFLLATAYDHLRQYKQAASY 406 Query: 250 VSLIQERYPQGYWARYVE 267 P +A Sbjct: 407 YHQFLASNPGPQFANQTW 424 >gi|120437738|ref|YP_863424.1| aerotolerance-related protein BatE [Gramella forsetii KT0803] gi|117579888|emb|CAL68357.1| aerotolerance-related protein BatE [Gramella forsetii KT0803] Length = 249 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 6/73 (8%), Positives = 23/73 (31%), Gaps = 3/73 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +++E+A + ++ A + + + + Y + Sbjct: 21 EDLFEEANSAYQSGDYEVAVSKYEAILANNETSA---EVYFNLGNAHYKMNHVAPSIYYY 77 Query: 118 EEYITQYPESKNV 130 E+ + P +++ Sbjct: 78 EKALQLDPTDEDI 90 >gi|26345382|dbj|BAC36342.1| unnamed protein product [Mus musculus] Length = 409 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 33/68 (48%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P++++V L + + + + D D A+ + Sbjct: 15 FAYYRVGEYVKALECAKAYLMFHPDNEDV-----LDNVDFYESLLDDSTDP-ASIEARED 68 Query: 162 MSRIVERY 169 ++ V+R+ Sbjct: 69 LTAFVKRH 76 >gi|309388802|gb|ADO76682.1| Tetratricopeptide TPR_1 repeat-containing protein [Halanaerobium praevalens DSM 2228] Length = 429 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 52/135 (38%), Gaps = 8/135 (5%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 + + ++ + + +++++ A+ + ++ + + FN + R+SL + Sbjct: 292 KTKEELISANNYLETKTEQQLFNLALDYFSRSDYQNSSDIFNSIYNLSETDYLKRESLFL 351 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 A YQ A Y+ +YPES D Y +G+ + K Sbjct: 352 LARSYEKMEAYQSAEHFYRIYLNEYPESNYYDEALYNLGLMLEEA--------GLEKKSK 403 Query: 160 QYMSRIVERYTNSPY 174 + ++R+ E S Y Sbjct: 404 EILTRLREEVPYSKY 418 Score = 43.2 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 R Y K Y +A +++ L Y ++ + +EA+ L L +++E+++ ++E Sbjct: 353 ARSYEKMEAYQSAEHFYRIYLNEYPESNYYDEALYNLGLMLEEAGLEKKSKEILTRLREE 412 Query: 257 YPQGYW-ARYVETLV 270 P + V ++ Sbjct: 413 VPYSKYNNSKVYNIL 427 >gi|317178017|dbj|BAJ55806.1| paralysed flagella protein [Helicobacter pylori F16] Length = 803 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 48/137 (35%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 188 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 247 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP ++ Y V + + K + Y RI+ Sbjct: 248 IKKSLLIDIGTKWIKNYPTDPSIPEALYYVAKALDEN--------NNYKQAMHYYKRILL 299 Query: 168 RYTNSPYVKGARFYVTV 184 Y +S Y A+ + + Sbjct: 300 EYKDSRYAPLAQMRLAI 316 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPSIPEALYY 276 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 277 VAKALDENNNYKQAMHYYKRILLEYKDSRYAPLAQMRLA 315 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 15/47 (31%) Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + NY EA+ + +A +A I Y +A Sbjct: 261 IKNYPTDPSIPEALYYVAKALDENNNYKQAMHYYKRILLEYKDSRYA 307 >gi|160883870|ref|ZP_02064873.1| hypothetical protein BACOVA_01843 [Bacteroides ovatus ATCC 8483] gi|293370498|ref|ZP_06617051.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f] gi|156110600|gb|EDO12345.1| hypothetical protein BACOVA_01843 [Bacteroides ovatus ATCC 8483] gi|292634490|gb|EFF53026.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f] Length = 597 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 36/198 (18%) Query: 61 YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y + ++ L ++ KA + FP SLL KY S Sbjct: 129 YSQGLVSLYQQQNELDKAAALLEKMVTRFPSKQDPLFSLLDI---YSRQEKYNDVISTLN 185 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + +++ + + + Y QM D K Q + +V+ Y Sbjct: 186 RLEKRLGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVQEYP-------- 226 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + +V +G YL+ G+ A +Q VLA D A+ + Y Sbjct: 227 ---MDM------RYQVILGDVYLQNGKKQEAYDAYQKVLAVEPD---NPMALFSMASYYE 274 Query: 239 ALALMDEAREVVSLIQER 256 + ++ + + Sbjct: 275 QTGQKELYQQQLDTLLLN 292 >gi|15126637|gb|AAH12250.1| Intraflagellar transport 88 homolog (Chlamydomonas) [Mus musculus] Length = 824 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 33/259 (12%), Positives = 76/259 (29%), Gaps = 55/259 (21%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99 Q+S L +D + K ++ KA E++ D + +L Sbjct: 468 QASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYN 523 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIR 146 + +A + ++ + +N V + Y Q+I Sbjct: 524 IGLTYKKLNRLDEAL---DSFLKLHAILRNSAQVLCQIANIYELMEDPNQAIEWLMQLIS 580 Query: 147 DVPYDQRATKL-------------MLQYMSRIVERYT--------------NSPYVKGAR 179 VP D +A QY + ++ + + A Sbjct: 581 VVPTDSQALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAI 640 Query: 180 FYVT---VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 Y + + ++ + + + G Y A+ ++ + + + E + LV Sbjct: 641 QYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPE---NVECLRFLVRL 697 Query: 237 YVALALMDEAREVVSLIQE 255 + L E +E + ++ Sbjct: 698 CTEIGLK-EVQEYATKLKR 715 >gi|897806|emb|CAA61596.1| protein phosphatase T [Saccharomyces cerevisiae] Length = 408 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 20/133 (15%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL--MSAFVQY 105 + D E + +F+KE++F KA E + D + +S+ AF + Sbjct: 4 PTAADRAKALERKNEGNVFVKEKHFLKAIEKYTEAIDLD------STQSIYFSNRAFAHF 57 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +Q A + +E I P++ Y+ +S ++ K + ++ + Sbjct: 58 KVDNFQSALNDCDEAIKLDPKNIK---AYHRRALSCMALLE--------FKKARKDLNVL 106 Query: 166 VERYTNSPYVKGA 178 ++ N P A Sbjct: 107 LKAKPNDPAATKA 119 >gi|198462498|ref|XP_001352454.2| GA15373 [Drosophila pseudoobscura pseudoobscura] gi|198150850|gb|EAL29950.2| GA15373 [Drosophila pseudoobscura pseudoobscura] Length = 1193 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 24/141 (17%) Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179 Y L+ + + RD +++ + L +++ + + + Sbjct: 601 AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHK 660 Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 V R+ A +E + I Y+++ +Y++AI ++ + + + E Sbjct: 661 GCVIEARDIFAQVREATADFSDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNV-EV 719 Query: 230 MARLVEAYVALALMDEAREVV 250 M L AY+ + EA+ V+ Sbjct: 720 MQYLARAYLRANKLVEAKAVL 740 >gi|296328304|ref|ZP_06870833.1| tetratricopeptide repeat family protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154608|gb|EFG95396.1| tetratricopeptide repeat family protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 936 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 11/129 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 Q+ + A FL ++N A + + + + + S++ V Y+ Y +A Sbjct: 127 QKTFFAVAQNFLAKENNEAAQKAYKEIIDN-KYENYKE-SMMGLGIVYYNLKDYDKAIYW 184 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 E+ + P+ +N + V YL + + T + + ++ Y + Sbjct: 185 LSEFSKEMPK-ENKEMVSYLKASALYRK--------GNTDEAISRFEELANVEPSTEYSR 235 Query: 177 GARFYVTVG 185 A Y+ Sbjct: 236 KAALYLIEI 244 Score = 42.4 bits (99), Expect = 0.070, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 69/206 (33%), Gaps = 33/206 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K + + + +A F + + ++ K L + A +Y +A GE+Y Sbjct: 508 YLKGIAAMGLGKYDEAESEFQKVLASGDQS-LSTKVYLNRVRNYFLAERYNEAVQAGEQY 566 Query: 121 ITQYPESKNVDYVYY-----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 +++ S + D V Y +G+SY ++ + YDQ S Y Sbjct: 567 LSK--LSPDKDKVIYSEMLDKIGLSYFRLGK---YDQAR-----------------SYYS 604 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 K A + +I Y Y A ++ V + + + E+A + + Sbjct: 605 KIASMKGYEAYGK-----FQIADSYYNEKNYEKAASLYKEVYNQFGETFYGEQAYYKYIM 659 Query: 236 AYVALALMDEAREVVSLIQERYPQGY 261 + + + YP Sbjct: 660 TLSLTGNTEAFEREKNNFMKVYPNSN 685 >gi|225164718|ref|ZP_03726953.1| tetratricopeptide TPR_4 protein [Opitutaceae bacterium TAV2] gi|224800664|gb|EEG19025.1| tetratricopeptide TPR_4 protein [Opitutaceae bacterium TAV2] Length = 873 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 59/206 (28%), Gaps = 28/206 (13%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 R + +A N ++A + D + +S ++ A G +A Sbjct: 579 PARSLLLQAEANFALGNPAEAVAQLRKLRTDAQDSDTKMRSFIVEADYYARTGNLAEAQR 638 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-- 173 L Y S Y + A+ + + + + R+ + Y S Sbjct: 639 LMTSLADDYRTSSYAPEALYQAALHAARRGGE-----EHIREAYRLLERLAKDYPASDLV 693 Query: 174 -YVKG-----ARFYVTVGRNQLAAKEVEIGRYYLKRG---EYVAAIP--RFQLVLANYSD 222 Y + AR Y QLA E I Y ++A R + D Sbjct: 694 FYARMKQGDLAREYNNFSDAQLA-YEYLINNYSQHADVLAAHLALANCHRARSAP---PD 749 Query: 223 AEHAEEAMARLVEAYVALALMDEARE 248 H E A+ L D A Sbjct: 750 VSHYESALTIYER------LRDLADT 769 >gi|258647260|ref|ZP_05734729.1| putative BatD protein [Prevotella tannerae ATCC 51259] gi|260852909|gb|EEX72778.1| putative BatD protein [Prevotella tannerae ATCC 51259] Length = 874 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 9/69 (13%), Positives = 21/69 (30%), Gaps = 4/69 (5%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + ++ A F + ++ P + S Y QA E + Sbjct: 652 AEGETLYAKHDYIGAVAAFERTAKANP----SAASYYNLGNAYYRTRNLPQAILYYERAL 707 Query: 122 TQYPESKNV 130 P + ++ Sbjct: 708 RLSPTNADI 716 >gi|157827039|ref|YP_001496103.1| TPR repeat-containing protein kinase [Rickettsia bellii OSU 85-389] gi|157802343|gb|ABV79066.1| tetratricopeptide repeat/protein kinase domain protein [Rickettsia bellii OSU 85-389] Length = 367 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 39/120 (32%), Gaps = 18/120 (15%) Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y G ++A + I P N YY G+ ++ M + Q Sbjct: 26 SFYFLGSPEKAIEAYTQVIKLNPNCAN---AYYNRGIVHSSM---YSHSQGHALQGYDDF 79 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 +++E N A Y G LA +GR + Y+A + + + + Sbjct: 80 KKVIEINPN-----DAEAYFHDGNRSLA----VLGR---RPEAYMATLEAYNYAIKLNPN 127 >gi|256026723|ref|ZP_05440557.1| hypothetical protein PrD11_01786 [Fusobacterium sp. D11] gi|289764719|ref|ZP_06524097.1| conserved hypothetical protein [Fusobacterium sp. D11] gi|289716274|gb|EFD80286.1| conserved hypothetical protein [Fusobacterium sp. D11] Length = 423 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 7/65 (10%) Query: 214 QLVLANYSDAEHAE-------EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 ++ + N+ + E E + +Y L E + + L+++ +P WA+ Sbjct: 356 RVAIENFKKSLSTEKMQDKKPEIYYNIASSYAKLGNKVEVTKYLRLLKQEFPNSEWAKKS 415 Query: 267 ETLVK 271 E L K Sbjct: 416 EVLTK 420 >gi|189220044|ref|YP_001940684.1| TPR repeats containing protein [Methylacidiphilum infernorum V4] gi|189186902|gb|ACD84087.1| TPR repeats containing protein [Methylacidiphilum infernorum V4] Length = 647 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 35/88 (39%), Gaps = 11/88 (12%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAAS 115 +++ ++A Q++ +A E + Q FP + A + Y G+ ++A + Sbjct: 468 QKLVDEASTLFSGQHYQEAAEKYRQILEKFPNSVTAWA-----NLGVIYYQQGQLKEAEN 522 Query: 116 LGEEYITQYPE----SKNVDYVYYLVGM 139 + + P + VYY G+ Sbjct: 523 ALAQALKLNPNDAFSHSILGIVYYQEGL 550 >gi|255525769|ref|ZP_05392699.1| TPR repeat-containing protein [Clostridium carboxidivorans P7] gi|296186324|ref|ZP_06854728.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7] gi|255510502|gb|EET86812.1| TPR repeat-containing protein [Clostridium carboxidivorans P7] gi|296049125|gb|EFG88555.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7] Length = 257 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 69/211 (32%), Gaps = 38/211 (18%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + +Y + + +F + +SKA + F + P + + A Y +Y++ Sbjct: 48 NSKYIDAYFNRGEVFRSLKEYSKAIKDFIRVIELNP---KDKDAYNNMAVAYYENREYEK 104 Query: 113 AASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + I + +N Y Y+ G++Y + ++ + + Sbjct: 105 ALDSYTKVIEL--DHEN--YNAYFNRGLTYKAQNK--------YHKAIKDFYKTIVLNPE 152 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 G Y G+Y A+ + + D+++ E+A Sbjct: 153 DKEAY-----------------FNRGIIYYNTGKYNKAVEDYTKAIEI--DSKY-EDAYN 192 Query: 232 RLVEAYVALALMDEA-REVVSLIQERYPQGY 261 A+ + EA + + +I+ P Sbjct: 193 NRGTAFYLIGKYKEAIEDYIKVIKLN-PNSS 222 Score = 40.1 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 9/92 (9%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMS 100 +D Y V + + + + +++ ++KA E + + + + Sbjct: 141 KDFYKTIVLNPEDKEAYFNRGIIYYNTGKYNKAVEDYTKAIEIDSKY------EDAYNNR 194 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 Y GKY++A + I P S + Y Sbjct: 195 GTAFYLIGKYKEAIEDYIKVIKLNPNSSEIYY 226 >gi|218438956|ref|YP_002377285.1| heat shock protein DnaJ domain protein [Cyanothece sp. PCC 7424] gi|218171684|gb|ACK70417.1| heat shock protein DnaJ domain protein [Cyanothece sp. PCC 7424] Length = 424 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 24/149 (16%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQY 105 S + Y + + ++ Q++ +A + F + P F + L Y Sbjct: 75 VDPSSPSPLTAEDYYRQGLTKIQRQSYLEAIKNFTKAIELNPNFLE----AYLRRIEAFY 130 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +GK +Q ++ + +P N YY +G S ++ T+ ++ S+ Sbjct: 131 KSGKDRQVLEDCQKVLQIHP---NCSQAYYYLGCSRQRL--------GYTQSAIEAYSQA 179 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEV 194 + Y LA E+ Sbjct: 180 IFYQP---YEAE-----FYHHRGLAYHEL 200 >gi|209882953|ref|XP_002142911.1| serine/threonine protein phosphatase [Cryptosporidium muris RN66] gi|209558517|gb|EEA08562.1| serine/threonine protein phosphatase, putative [Cryptosporidium muris RN66] Length = 537 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 33/101 (32%), Gaps = 23/101 (22%) Query: 59 EVYE-KAVLFLKEQNFSKAYEYFNQC------------SRDFPFAGVARKSLLMSAFVQY 105 E+Y+ K +E N+ +A EY++ + + ++L Sbjct: 15 EIYKGKGNASFQEGNYLEAVEYYSMAINASISATNASNENLHVY--YSNRAL-----CNI 67 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 Y A E I P YY G++Y + R Sbjct: 68 RLENYGSAIIDAEASIDLCPTYSK---AYYRRGVAYLNLFR 105 >gi|308062558|gb|ADO04446.1| paralysed flagella protein [Helicobacter pylori Cuz20] Length = 803 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 188 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 247 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP ++ V Y V + + K ++Y RI+ Sbjct: 248 IKKSLLIDIGTKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 299 Query: 168 RYTNSPYVKGARFYVTV 184 Y NS Y A+ + + Sbjct: 300 EYKNSRYAPLAQMRLAI 316 Score = 42.8 bits (100), Expect = 0.053, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPSIPEVLYY 276 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 277 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 315 >gi|237745073|ref|ZP_04575554.1| conserved hypothetical protein [Fusobacterium sp. 7_1] gi|260494851|ref|ZP_05814981.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33] gi|229432302|gb|EEO42514.1| conserved hypothetical protein [Fusobacterium sp. 7_1] gi|260198013|gb|EEW95530.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33] Length = 423 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 7/65 (10%) Query: 214 QLVLANYSDAEHAE-------EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 ++ + N+ + E E + +Y L E + + L+++ +P WA+ Sbjct: 356 RVAIENFKKSLSTEKMQDKKPEIYYNIASSYAKLGNKVEVTKYLRLLKQEFPNSEWAKKS 415 Query: 267 ETLVK 271 E L K Sbjct: 416 EVLTK 420 >gi|310778297|ref|YP_003966630.1| Lytic transglycosylase catalytic [Ilyobacter polytropus DSM 2926] gi|309747620|gb|ADO82282.1| Lytic transglycosylase catalytic [Ilyobacter polytropus DSM 2926] Length = 630 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 58/183 (31%), Gaps = 25/183 (13%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K I +I + + +D +++ FL + N+ A Sbjct: 1 MKKILFFIILAINSLISFAADDVNIKDY------------KIFASGKNFLSQNNYKDALT 48 Query: 79 YFNQCSRDFPFAGV--ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 F S +P + + + + Y+ G Y A + E I P+ + Y+ Sbjct: 49 QFELLSEKYPESLLFKSNYANYYIGITYYNLGDYDNARNFLERAIYT-PKDFKAEDPYFQ 107 Query: 137 VGMSYA------QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 + + + +Q L++ +V+ Y Y K Y + +L Sbjct: 108 KSKKHLFEYKRNYYLAKIYLEQGLKDEALKHFKFLVKNY----YSKELETYEKMALKELE 163 Query: 191 AKE 193 + Sbjct: 164 KHD 166 >gi|188501570|gb|ACD54697.1| TPR repeat containing protein-like protein [Adineta vaga] Length = 790 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 50/124 (40%), Gaps = 13/124 (10%) Query: 60 VYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQA 113 +Y + ++ + +A +Y+ + + + + L S++ + ++ G+YQ+A Sbjct: 443 IYNELGLIKNNRGEYVEAIKYYEKAIAIQQQSLYSNHTDLASSYNNIGLMYHNMGEYQKA 502 Query: 114 ASLGEEYI-----TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR-IVE 167 S E+ + + P ++ Y +G Y +M D P + L + + Sbjct: 503 LSYYEKSLTIQQQSLLPNHPDLAASYNNIGSVYYKM-DDYPKALSYYEKSLVIRQQSLPS 561 Query: 168 RYTN 171 + + Sbjct: 562 NHPD 565 >gi|165923888|ref|ZP_02219720.1| tetratricopeptide repeat protein/methyltransferase [Coxiella burnetii RSA 334] gi|165916673|gb|EDR35277.1| tetratricopeptide repeat protein/methyltransferase [Coxiella burnetii RSA 334] Length = 561 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 49/182 (26%), Gaps = 49/182 (26%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A +++ +FSKA Y+ + P + ++Q+A + Sbjct: 179 AHVYMYLGDFSKAITYYEKRLALEPENA---DAQYDCGLAHLKDNQFQKAIDYFTNALLL 235 Query: 124 YPESKNVDY----VYYLVG------MSYAQMIRDVPYD------------QRATKLMLQY 161 PE + Y Y G + Y + + P Q + + Y Sbjct: 236 NPEHPDCHYSLATAYLQRGDHKEALIHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDY 295 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + + N + I YLK I + + + +Y Sbjct: 296 FKQALTLDPNYREA-----------------HLNIAAVYLK-------INQIKQAIEHYE 331 Query: 222 DA 223 Sbjct: 332 ST 333 >gi|225431627|ref|XP_002262727.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296088538|emb|CBI37529.3| unnamed protein product [Vitis vinifera] Length = 217 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 6/82 (7%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKS 96 + RD D V + EK + +F +A +YF Q ++ F+ AR Sbjct: 68 SPNERDASADVSQRVSEAVSLLEKGRELQAQGDFERALQYFTQVVNNYKDFAFSDYAR-- 125 Query: 97 LLMSAFVQYSAGKYQQAASLGE 118 + A Y G Q+A + E Sbjct: 126 -VGRALALYEVGDRQEAIAEME 146 >gi|15894350|ref|NP_347699.1| TPR repeat-containing protein [Clostridium acetobutylicum ATCC 824] gi|15023978|gb|AAK79039.1|AE007622_1 TPR-repeat-containing protein [Clostridium acetobutylicum ATCC 824] gi|325508478|gb|ADZ20114.1| TPR-repeat-containing protein [Clostridium acetobutylicum EA 2018] Length = 254 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 58/169 (34%), Gaps = 22/169 (13%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 +++E+ + +++KA EYF + S++ F + K+++A Sbjct: 4 EKIFEEGEEYYVNGDYNKALEYFQNGYKISKNEDFLNY-------IGCCYLNLNKFEEAI 56 Query: 115 SLGEEYITQYPESK----NVDYVY-----YLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 S EE + YPE + N+ VY Y + Y + D Y Sbjct: 57 STFEELMQVYPEWERPVFNLGRVYLKLELYQEALDYFNKALVINPDDEDVYF---YFGIY 113 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 E+ + + + +G YL+ +Y AI F Sbjct: 114 FEKKRDYKNAICCQKKSLRLNKFQPETHLHLGLCYLRTNKYNEAIVEFD 162 >gi|153207820|ref|ZP_01946420.1| tetratricopeptide repeat protein/methyltransferase [Coxiella burnetii 'MSU Goat Q177'] gi|212218831|ref|YP_002305618.1| tetratricopeptide repeat family protein [Coxiella burnetii CbuK_Q154] gi|120576372|gb|EAX32996.1| tetratricopeptide repeat protein/methyltransferase [Coxiella burnetii 'MSU Goat Q177'] gi|212013093|gb|ACJ20473.1| tetratricopeptide repeat family protein [Coxiella burnetii CbuK_Q154] Length = 561 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 49/182 (26%), Gaps = 49/182 (26%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A +++ +FSKA Y+ + P + ++Q+A + Sbjct: 179 AHVYMYLGDFSKAITYYEKRLALEPENA---DAQYDCGLAHLKDNQFQKAIDYFTNALLL 235 Query: 124 YPESKNVDY----VYYLVG------MSYAQMIRDVPYD------------QRATKLMLQY 161 PE + Y Y G + Y + + P Q + + Y Sbjct: 236 NPEHPDCHYSLATAYLQRGDHKEALIHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDY 295 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + + N + I YLK I + + + +Y Sbjct: 296 FKQALTLDPNYREA-----------------HLNIAAVYLK-------INQIKQAIEHYE 331 Query: 222 DA 223 Sbjct: 332 ST 333 >gi|254423378|ref|ZP_05037096.1| O-Antigen Polymerase family [Synechococcus sp. PCC 7335] gi|196190867|gb|EDX85831.1| O-Antigen Polymerase family [Synechococcus sp. PCC 7335] Length = 845 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 53/158 (33%), Gaps = 30/158 (18%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-----------KAVLFLK 69 +F ++ S+A V S D +DV Y K K Sbjct: 477 RFDTGLYLSLAAANDVKNGNVVSADAKWSRASDVVGWDPTYAVLAAERLVKLRKGAANQK 536 Query: 70 EQN--FSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 +++ + A EY R P + + L+ G+ + A S E ++ P Sbjct: 537 DKDILTASAIEYLESAIRSAPNDPWFNQNIATLLI-----QNGRAEAAESYAERAVSLIP 591 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 S+N Y YY +G+SY DQ T S Sbjct: 592 RSRN--YTYYTLGLSY--------LDQGKTNQATSAFS 619 >gi|195586887|ref|XP_002083199.1| GD13607 [Drosophila simulans] gi|194195208|gb|EDX08784.1| GD13607 [Drosophila simulans] Length = 612 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 53/141 (37%), Gaps = 24/141 (17%) Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179 Y L+ + + RD +++ + L +++ + + + Sbjct: 62 AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHK 121 Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 V R+ A +E + I Y+++ +Y++AI ++ + + + E Sbjct: 122 GCVIEARDIFAQVREATADFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNV-EV 180 Query: 230 MARLVEAYVALALMDEAREVV 250 M L AY+ + +A+ V+ Sbjct: 181 MQYLARAYLRANKLVDAKAVL 201 >gi|17228384|ref|NP_484932.1| hypothetical protein all0889 [Nostoc sp. PCC 7120] gi|17130234|dbj|BAB72846.1| all0889 [Nostoc sp. PCC 7120] Length = 605 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 76/221 (34%), Gaps = 38/221 (17%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAF 102 D L S + Y + + + N+ +A Q + P+ A + + + Sbjct: 135 DPLLASNINEDIANAYYYRGLNNNDQGNYQEAIIDLQQALQWHPYFAAAYSIRGNI---- 190 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y G+Y+QA + E + N+ Y G ++ + A + + Sbjct: 191 -YYKLGEYRQAIADHERAVQL---DPNLAEAYQNRGNAHYAL--------GAYQKAIADY 238 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAA 209 +R +E +P+ GA + + L + + Y +RG A Sbjct: 239 NRTLEI---NPHQVGAYYNRGLISFYLHEYQQAFADFNQVLNFNPNDAQAYYQRGLIYEA 295 Query: 210 IPRFQLVLANYSDAEH--AEEAMARLVEA--YVALALMDEA 246 +Q LA+Y+ + +E A+ V A Y L A Sbjct: 296 WQDYQSALADYNQSLQLNSELAVVYGVRANIYRHLGDYPSA 336 Score = 35.9 bits (82), Expect = 6.8, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 60/205 (29%), Gaps = 66/205 (32%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE---- 126 +++ A +FN P A ++ A +Y + A + ++ + P Sbjct: 51 KDYQGAIAFFNLAVEINP--NYA-QAYYHRANARYCLADFTAAIADYDQALQINPTFAEY 107 Query: 127 -----------------------------------SKNVDYVYYLVGMSYAQMIRDVPYD 151 ++++ YY G++ D Sbjct: 108 YYCRGNAYLAQGDYDQAIANYISTIEFDPLLASNINEDIANAYYYRGLNN--------ND 159 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGA-------RFYVTVGRNQLAAKEVEI------GR 198 Q + + + + ++ + Y A + + R +A E + Sbjct: 160 QGNYQEAIIDLQQALQWHP---YFAAAYSIRGNIYYKLGEYRQAIADHERAVQLDPNLAE 216 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDA 223 Y RG A+ +Q +A+Y+ Sbjct: 217 AYQNRGNAHYALGAYQKAIADYNRT 241 Score = 35.5 bits (81), Expect = 8.5, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 38/182 (20%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y + L +QN+ A + Q P + + A +Y+ YQ A + Sbjct: 454 EAYYNRGSLHYDQQNYRSAIADYTQALELQPESA---RYYSDRAHARYALQDYQGAVADY 510 Query: 118 EEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + I P Y +Y G S+ + + L +++ ++ + + + Sbjct: 511 TQSIAINPG-----YAEDWYNRGRSHLLL--------GYLEEALADLNQALKFHPH--WA 555 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS---DAEHAEEAMAR 232 + RN RG+Y AAI FQ YS + ++ ++ + Sbjct: 556 SAYLLRADILRN---------------RGDYQAAIADFQKSADLYSQEGNTQNYQQILEI 600 Query: 233 LV 234 + Sbjct: 601 IA 602 >gi|330806375|ref|XP_003291146.1| hypothetical protein DICPUDRAFT_155712 [Dictyostelium purpureum] gi|325078707|gb|EGC32344.1| hypothetical protein DICPUDRAFT_155712 [Dictyostelium purpureum] Length = 1008 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 67/192 (34%), Gaps = 45/192 (23%) Query: 73 FSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 +S + EY++ + A K LM + KYQ A + + I P+ Sbjct: 483 WSDSEEYYSLIKSS--SSENWAAKEKLM-GNQNFQEKKYQSALAHYSKAIKLNPDDP--- 536 Query: 132 YVYYL-VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 +YY G+ Y ++ R + S +++ Sbjct: 537 -IYYSNRGIVYYKLNR--------FFEAITDFSISIDKQP-------------------- 567 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEAMARLVEAYVALALMDEAREV 249 K+ ++ YL+R AAI + + ++ ++ E++ L Y +L ++ ++ Sbjct: 568 -KQFKV---YLRRASSYAAIGDYTNAIRDFKAGLKYEPESIDLLEGLYKSLKCIEL--DL 621 Query: 250 VSLIQERYPQGY 261 I PQ Sbjct: 622 KRRITAN-PQSN 632 >gi|317181000|dbj|BAJ58786.1| paralysed flagella protein [Helicobacter pylori F32] Length = 803 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 188 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 247 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP ++ V Y V + + K ++Y RI+ Sbjct: 248 IKKSLLIDIGTKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 299 Query: 168 RYTNSPYVKGARFYVTV 184 Y NS Y A+ + + Sbjct: 300 EYKNSRYAPLAQMRLAI 316 Score = 42.8 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPSIPEVLYY 276 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 277 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 315 >gi|300313325|ref|YP_003777417.1| lipoprotein [Herbaspirillum seropedicae SmR1] gi|300076110|gb|ADJ65509.1| lipoprotein [Herbaspirillum seropedicae SmR1] Length = 200 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 33/106 (31%), Gaps = 9/106 (8%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 I ++ V L G + D + + + +A E +A + Sbjct: 10 LIVSAMLVLALGGCTNIQPKSNPGDDAKNAL-ESGL-AQANAAHAEGKTDEAVSVLKAVA 67 Query: 85 RDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 FP R + L + AG Y A +E + + P K Sbjct: 68 SRFPADKNPWIRIAQLR-----FDAGDYSDAIVNAQEALRRDPGDK 108 >gi|291613916|ref|YP_003524073.1| hypothetical protein Slit_1449 [Sideroxydans lithotrophicus ES-1] gi|291584028|gb|ADE11686.1| hypothetical protein Slit_1449 [Sideroxydans lithotrophicus ES-1] Length = 862 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 1/74 (1%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + E L A E FN+ P + L + G +A + Sbjct: 304 LMENGGNALLTGQSFAAIESFNKVLTL-PPNTYTEDAQLWIGIAKERTGLLDKAILEYQS 362 Query: 120 YITQYPESKNVDYV 133 Y+ YP+ K+ +V Sbjct: 363 YLRLYPKGKSEAWV 376 >gi|158289256|ref|XP_311010.4| AGAP000136-PA [Anopheles gambiae str. PEST] gi|157018967|gb|EAA06388.4| AGAP000136-PA [Anopheles gambiae str. PEST] Length = 1341 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 63/192 (32%), Gaps = 43/192 (22%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A +L++ N +KA E + P ++ A++ K + A S + Sbjct: 683 ADFYLQQGNQTKAIELLKRMQ---PNQPYYVQAKTKMAYIYLHQRKDRLAFSQC--FREL 737 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 + S M+ D + ++ + + + A Sbjct: 738 VANCPSA---------SSYLMLGDAYMSIQEPDDAIKAYREAIRQSPH-----DA----- 778 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL---ANYSDAEHAEEAMAR-LVEAYVA 239 LA+K +GR Y++ +Y AI +Q + NY + L E Y+ Sbjct: 779 ----LLASK---LGRAYVRTHQYQKAIAYYQEAILHPENYP--------LKLDLAELYLK 823 Query: 240 LALMDEAREVVS 251 L A + ++ Sbjct: 824 LKQYQNAEQTLA 835 >gi|20090223|ref|NP_616298.1| O-linked GlcNAc transferase [Methanosarcina acetivorans C2A] gi|19915215|gb|AAM04778.1| O-linked GlcNAc transferase [Methanosarcina acetivorans C2A] Length = 400 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 66/201 (32%), Gaps = 35/201 (17%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 Y Y KA+ + ++ +A E + + + + +++ G+Y +A Sbjct: 153 DYPNAWYGKALNLSQAGSYEEAVEAYEKVLEE---SPDYKEAWAGKGIALGQMGRYDEAI 209 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 ++ I P +Y G+ + + + L+ + VE + Sbjct: 210 IAYDKAIEIDPGFLE---AWYYKGVDLDSL--------GSHRQALKAYEKAVELDPEN-- 256 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYS 221 A + + L E I + + +G ++ + RF+ + Y Sbjct: 257 -DDAWNNMGIDLENLEKYEEAINAFDKAIAINSENSDVWYNKGFTLSQMHRFEEAVEAYR 315 Query: 222 D-AEHAEEAMARLVEAYVALA 241 + E + EAY +L Sbjct: 316 KATQLDPEYL----EAYTSLG 332 >gi|88798070|ref|ZP_01113657.1| protein containing tetratricopeptide repeat [Reinekea sp. MED297] gi|88779267|gb|EAR10455.1| protein containing tetratricopeptide repeat [Reinekea sp. MED297] Length = 647 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 24/61 (39%), Gaps = 4/61 (6%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y ++ ++E + +A F + F ++ L Y G + +A + Sbjct: 263 DLY-TGLIQMQEGAYDEAIFSFERVLI---FEPNQHRARLELGRAYYLTGNFYRAREALQ 318 Query: 119 E 119 + Sbjct: 319 Q 319 >gi|195376509|ref|XP_002047039.1| GJ12147 [Drosophila virilis] gi|194154197|gb|EDW69381.1| GJ12147 [Drosophila virilis] Length = 1187 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 24/141 (17%) Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179 Y L+ + + RD +++ + L +++ + + + Sbjct: 600 AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRTDPRNIWATNGIGAVLAHK 659 Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 V R+ A +E + I Y+++ +Y++AI ++ + + + E Sbjct: 660 GCVIEARDIFAQVREATADFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNV-EV 718 Query: 230 MARLVEAYVALALMDEAREVV 250 M L AY+ + EA+ V+ Sbjct: 719 MQYLARAYLRANKLVEAKAVL 739 >gi|167752253|ref|ZP_02424380.1| hypothetical protein ALIPUT_00496 [Alistipes putredinis DSM 17216] gi|167660494|gb|EDS04624.1| hypothetical protein ALIPUT_00496 [Alistipes putredinis DSM 17216] Length = 273 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 31/100 (31%), Gaps = 8/100 (8%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQA 113 Y + + + +A + + + D + + + Q+ KY +A Sbjct: 61 EAAYNLGGALYRTEKYEEAAKMLERIAAD---STRTDQERAEAFYNLGNAQFKQEKYPEA 117 Query: 114 ASLGEEYITQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQ 152 + + P + Y Y Y + Q D DQ Sbjct: 118 LESYKNSLRMNPADQEAKYNYAYTKRLLQKQQNEDQNKDQ 157 >gi|145535942|ref|XP_001453700.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124421430|emb|CAK86303.1| unnamed protein product [Paramecium tetraurelia] Length = 506 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 16/117 (13%), Positives = 41/117 (35%), Gaps = 12/117 (10%) Query: 62 EKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+ + + F +A F+ + + L + ++ +YQ+A + + Sbjct: 154 EQGRELIYKGKFMEALSIFDSSIKLFDQ----DY--DAYLGKGYALHNLNQYQEAIACYD 207 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + I+ P N VYY G + + + ++ + + N+ + Sbjct: 208 KAISINPNDGN---VYYNKGNILQSQLGFTLFTLNKYQEAIESYEKAISINPNNEHT 261 >gi|254304062|ref|ZP_04971420.1| hypothetical protein FNP_1732 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324254|gb|EDK89504.1| hypothetical protein FNP_1732 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 425 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 9/94 (9%) Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE-------EAMARLVEAY 237 +N + E YY K + + + PR + N+ + E E + +Y Sbjct: 334 VKNTTSKNETNGESYYDKAMKNLNSNPRV--AIENFKKSLSTEKIQDKKPEIYYNIASSY 391 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 L E + + L+++ +P W + E L K Sbjct: 392 AKLGNKVEVTKYLRLLKQEFPNSEWVKRSEALTK 425 >gi|254414719|ref|ZP_05028484.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196178567|gb|EDX73566.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 942 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 47/140 (33%), Gaps = 19/140 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + L + +A F + + F + ++ L G+Y++A + ++ Sbjct: 52 YNRGTALLNIGEYEEAIASFEKALQ---FKPDSYEAWLNRGLALAKLGEYEEAITFFDKA 108 Query: 121 ITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I P+S Y + G++ A++ + + + ++ + Sbjct: 109 IQIKPDS----YEAWLNRGLALAKL--------GEYEEAIASYDKAIQIKPD---KHETW 153 Query: 180 FYVTVGRNQLAAKEVEIGRY 199 + + L E I Y Sbjct: 154 HNWGLVLDDLGEYEEAIASY 173 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 16/114 (14%), Positives = 40/114 (35%), Gaps = 20/114 (17%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + G+++QA + ++ + P+ N +Y G + + + + Sbjct: 24 YFQLGQFEQAIASYDKALQIKPDDHN---AWYNRGTALLNI--------GEYEEAIASFE 72 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-----GEYVAAIPR 212 + ++ +S Y + + + L E I ++ K Y A + R Sbjct: 73 KALQFKPDS-YEAWLNRGLALAK--LGEYEEAI-TFFDKAIQIKPDSYEAWLNR 122 >gi|149245874|ref|XP_001527407.1| serine/threonine-protein phosphatase T [Lodderomyces elongisporus NRRL YB-4239] gi|146449801|gb|EDK44057.1| serine/threonine-protein phosphatase T [Lodderomyces elongisporus NRRL YB-4239] Length = 533 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 41/134 (30%), Gaps = 18/134 (13%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASL 116 ++ ++ FLKE F +A E + + P + ++ + + A Sbjct: 10 KLKDQGNKFLKEHKFDEAIEAYTKAIELDPKNAIFYSNRAQVRI-----KLENFGLAIQD 64 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + I P YY +S +++ TK Q I+ + N Sbjct: 65 CDSAIAVDPNFIK---AYYRKAVSQMAILQ--------TKQAQQNFKFILTKLPNDKLTL 113 Query: 177 GARFYVTVGRNQLA 190 T + A Sbjct: 114 EHYKKCTALLKREA 127 >gi|312217038|emb|CBX96987.1| similar to serine/threonine-protein phosphatase 5 [Leptosphaeria maculans] Length = 481 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 49/164 (29%), Gaps = 35/164 (21%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYSAG 108 T + + + Q + KA EY+ + + P + ++ Sbjct: 3 TPSEEATALKNQGNDAFRNQAWDKALEYYTKAIEAYNAEP-SFYCNRAQ-----TYIKLE 56 Query: 109 KYQQAASLGEEYITQYPES--KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 +Y A + I P + + YY + +++ + L+ +V Sbjct: 57 QYGYAIQDADTAIELDPNNVKPHH-QAYYRRASANTAILKH--------REALRDWKLVV 107 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 ++ N A+ + +KR ++ AI Sbjct: 108 KKAPND---ATAKLRMVECEKV------------VKRDAFLKAI 136 >gi|291230109|ref|XP_002735012.1| PREDICTED: CG4525-like [Saccoglossus kowalevskii] Length = 532 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 70/200 (35%), Gaps = 16/200 (8%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 FL ++++ A + ++ L A+ + G Y++A E + Sbjct: 31 EDFLSARDYTGAITLLEFTRSS---GKSSEETDLWIAYCAFHLGDYKRAMDEYERMTKKD 87 Query: 125 PESK----NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 NV Y+ +GM Y + + + L + + + +++ + + Sbjct: 88 ACHPDVWCNVACCYFFLGM-YPEADAATQKGPK-SGLQNRLLFHVSQKFNDEKRLMSHHQ 145 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + ++ + + R Y AI ++ +L + D + Y L Sbjct: 146 SLQDVI----EDQLSLASIHYLRSHYQEAIDIYKRILLDNRDYLALN---VYVALCYYKL 198 Query: 241 ALMDEAREVVSLIQERYPQG 260 D ++EV+++ + YP Sbjct: 199 DYYDVSQEVLAVYLQNYPDS 218 >gi|304317603|ref|YP_003852748.1| glycosyl transferase family 2 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779105|gb|ADL69664.1| glycosyl transferase family 2 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 1807 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 96/267 (35%), Gaps = 46/267 (17%) Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63 + +++ + +L+++ + + ++ ++ Y D Y + Sbjct: 1394 IATKSMNLNSYATPRLFRYLIMTYIALKEYDTALRIINDAKKYYEDIPDYK------YLE 1447 Query: 64 AVLFLKEQNFSKAYEYFN--QCSRDFPF--------AGVARKSLLMSAFVQYSAGKYQQA 113 ++ ++ + KA E F ++ ++ M GK A Sbjct: 1448 GTIYFNQKRYEKALEIFKECALMGEYKGQFVTMGGTGSY--RAKYMIGQCYEKLGKLNDA 1505 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 E + Q+P ++V + ++ +++ + + ++ + V Sbjct: 1506 VKEYMEILKQHPNYQDV----------FIKVFDMFVRNEKP-EDVYEFFRKHVNTKVPIN 1554 Query: 174 YVKGARFYVTVGRNQLAAKEVEI------------GRYYLKRGEYVAAIPRFQLVLANYS 221 Y+ AR Y+ +GR +A + ++ G Y+ +Y AI F++ Y Sbjct: 1555 YIAIARLYINIGRYDIAKQYIDSIDIDLEGLNNLRGIIYMGLKDYENAIKHFEM---EYG 1611 Query: 222 DAEHAEEAMARLVEAYVALALMDEARE 248 + EEA R Y+ L +D+A++ Sbjct: 1612 --KAKEEANYREALCYIILKDIDKAKD 1636 >gi|149278726|ref|ZP_01884861.1| TPR repeat [Pedobacter sp. BAL39] gi|149230345|gb|EDM35729.1| TPR repeat [Pedobacter sp. BAL39] Length = 208 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 22/144 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + + + ++ A + + + L M + Y G ++++ + IT Sbjct: 30 GMQAMMKGDYKAAVGQLEKANTK---SPNNANVLKMLGYSYYQCGNFERSIETYSQLITV 86 Query: 124 YPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKL-----MLQYMSRIVERYTNSPYVKG 177 P DY YY G + + D + ++ ++ +E Sbjct: 87 KPS----DYSAYYYRGKARQNVANDPKESLNQMRENFYLSAIKDFTKAIEL--------N 134 Query: 178 ARFYVTVGRNQ-LAAKEVEIGRYY 200 + +N+ LA K+ I R Y Sbjct: 135 GEEDTQLLQNRALAYKDYAIYRSY 158 >gi|118347681|ref|XP_001007317.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89289084|gb|EAR87072.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 589 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 23/116 (19%) Query: 61 YEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 YEK +++ ++NF +A +YF P A + + Q A E Sbjct: 98 YEKLGLIYFDQKNFQQAIKYFKMGVNINPNYQYM---QYNLAIAYKNNKQIQLAIKHFE- 153 Query: 120 YITQYPESKNVD----YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 S +D Y YY +G+ Y+ DQ+ ++Y + ++ Y N Sbjct: 154 ------VSLEIDEQNRYAYYNLGLIYS--------DQKLIDNAIKYFQQAIKIYPN 195 >gi|310825327|ref|YP_003957685.1| hypothetical protein STAUR_8103 [Stigmatella aurantiaca DW4/3-1] gi|309398399|gb|ADO75858.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 308 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 23/181 (12%), Positives = 55/181 (30%), Gaps = 31/181 (17%) Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y++A L + L + +QR K + ++ + Sbjct: 43 EYRKAVDLLRR--------DDTPQSLVLRARALKGAADVYWLEQRKVKEAVSVYKELLVQ 94 Query: 169 YTNSPYVKGARFYVTVG-----------RNQL-----------AAKEVEIGRYYLKRGEY 206 SP AR + +QL A ++ + Y + +Y Sbjct: 95 CPESPEALEARIILAELLRVHYNDLRGAIDQLTAALQRNPPQGAELHYQVAKLYFELADY 154 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL-ALMDEAREVVSLIQERYPQGYWARY 265 + ++ + + ++A+ +A + EA + ++ R+P A + Sbjct: 155 AQCELEATRLAERFATSAYVDDALFLRAQAIQMMEGRRQEASRAYADLRTRFPDSELAAH 214 Query: 266 V 266 Sbjct: 215 A 215 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 37/128 (28%), Gaps = 13/128 (10%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESK 128 + A + + P + + L A + + Y Q ++ S Sbjct: 117 NDLRGAIDQLTAALQRNP----PQGAELHYQVAKLYFELADYAQCELEATRLAERFATSA 172 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 VD +L + M + + + + + R+ +S A + R + Sbjct: 173 YVDDALFLRAQAIQMM-------EGRRQEASRAYADLRTRFPDSELAAHATVEMGRLRAE 225 Query: 189 LAAKEVEI 196 E I Sbjct: 226 AGENEKAI 233 >gi|162454790|ref|YP_001617157.1| hypothetical protein sce6508 [Sorangium cellulosum 'So ce 56'] gi|161165372|emb|CAN96677.1| putative membrane protein [Sorangium cellulosum 'So ce 56'] Length = 282 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 28/93 (30%), Gaps = 13/93 (13%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARKSLLMSAFVQY-- 105 ++++ L + A + F + P A R A+V Sbjct: 34 AQPAEPPEALFQEGTAALGRGEYGAAIDTFELLADRGFVHPDASYNR----GLAYVTRVR 89 Query: 106 ----SAGKYQQAASLGEEYITQYPESKNVDYVY 134 G +AA+ EE + P + D+ Sbjct: 90 EGADRPGDLGRAAAAFEEALRLRPGDADADHAL 122 >gi|295132202|ref|YP_003582878.1| aerotolerance-related protein BatE [Zunongwangia profunda SM-A87] gi|294980217|gb|ADF50682.1| aerotolerance-related protein BatE [Zunongwangia profunda SM-A87] Length = 249 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 10/74 (13%), Positives = 21/74 (28%), Gaps = 3/74 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++E+A + N+ A + + A A Y + Sbjct: 20 NEALFEQANKAYADGNYEDAIKKYESILDK---GETAVSLYYNLANAHYKLNHIAPSIYY 76 Query: 117 GEEYITQYPESKNV 130 E+ + P +V Sbjct: 77 YEKALQLAPNDADV 90 >gi|296234171|ref|XP_002762302.1| PREDICTED: serine/threonine-protein phosphatase 5 isoform 1 [Callithrix jacchus] Length = 499 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 55/173 (31%), Gaps = 33/173 (19%) Query: 32 VCFLVGWERQSSRDVYLDSVTD--VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 + G + + + TD ++ E+ +A + K +++ A ++++Q P Sbjct: 1 MAMAEGERTECAEPPRDEPPTDGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS 60 Query: 90 AG--VARKSLLMSAF----VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +S A+ Y+ G +A L ++YI YY S Sbjct: 61 NAIYYGNRS---LAYLRTECYGYALGDATRAIELDKKYIK----------GYYRRAASNM 107 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + + L+ +V+ + A+ + K E Sbjct: 108 AL--------GKFRAALRDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149 >gi|261211898|ref|ZP_05926185.1| TPR repeat-containing protein [Vibrio sp. RC341] gi|260839248|gb|EEX65880.1| TPR repeat-containing protein [Vibrio sp. RC341] Length = 257 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 55/144 (38%), Gaps = 16/144 (11%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 S D + + ++ Y+ AV LK+++++ A F + D+P + + + Sbjct: 123 SGSDDAAQGTFSSDANEQAAYQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSANASYW 182 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPE---SKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + ++ ++A + +I + +K D + + D+ + Sbjct: 183 LGQLYFAKKDDKEA---AKSFIAVVSQKDSNKRAD------ALV---KLGDIAKRNNNAE 230 Query: 157 LMLQYMSRIVERYTNSPYVKGARF 180 ++ + ++ Y +S K A+ Sbjct: 231 QARKFYQQAIDEYPDSASAKIAKE 254 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + Y NS + A +++ G+ Y Sbjct: 143 YQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSANASYWL--------------GQLYF 188 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A F V++ D+ +A+ +L + ++AR+ + YP Sbjct: 189 AKKDDKEAAKSFIAVVSQ-KDSNKRADALVKLGDIAKRNNNAEQARKFYQQAIDEYPDSA 247 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 248 SAKIAKESLK 257 >gi|195170683|ref|XP_002026141.1| GL16176 [Drosophila persimilis] gi|194111021|gb|EDW33064.1| GL16176 [Drosophila persimilis] Length = 1180 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 24/141 (17%) Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179 Y L+ + + RD +++ + L +++ + + + Sbjct: 601 AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHK 660 Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 V R+ A +E + I Y+++ +Y++AI ++ + + + E Sbjct: 661 GCVIEARDIFAQVREATADFSDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNV-EV 719 Query: 230 MARLVEAYVALALMDEAREVV 250 M L AY+ + EA+ V+ Sbjct: 720 MQYLARAYLRANKLVEAKAVL 740 >gi|255645435|gb|ACU23213.1| unknown [Glycine max] Length = 342 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 16/110 (14%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + + K + +A E F P A + A + + Q A S EE Sbjct: 230 EGLQLYKNGKYDEALEKFESILGSKPEPEEAAVASYNVACCYFKLNQTQAALSSLEE--A 287 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 ++ + IR P D + + +++R+ S Sbjct: 288 LNTGFED------------FKRIRTDP-DLANAR-ASEEFDPLLKRFDES 323 >gi|212640349|ref|YP_002316869.1| TPR -repeat containing protein [Anoxybacillus flavithermus WK1] gi|212561829|gb|ACJ34884.1| TPR-repeat-containing protein [Anoxybacillus flavithermus WK1] Length = 496 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 14/111 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E+A L++ F +A F + ++ P A + A + G +A E + Sbjct: 167 EQARTLLEKGEFQEAITLFEEMIKEHP-ENWA--AYNNLALAYFYQGNVGKAKQTIEYIL 223 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 Q P + L + + +Q L++Q + R+ Y S Sbjct: 224 EQNPGN--------LHALCNDAVFSYYLQEQERLFLLIQSLQRV---YPIS 263 >gi|328788255|ref|XP_624242.2| PREDICTED: serine/threonine-protein phosphatase 5 [Apis mellifera] Length = 793 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 49/155 (31%), Gaps = 25/155 (16%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKS 96 +++ + S D + E+A + K Q+++KA E + + P +S Sbjct: 1 MSENAEITGVISPEDAARAEKFKEEANEYFKNQDYTKAIELYTKAIELNPTVAVYYGNRS 60 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRA 154 F + A + + I + +YV YY ++ + Sbjct: 61 -----FAYLKTEFFGYALTDASKAIEL-----DKNYVKGYYRRAAAHMSL--------GK 102 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 KL L+ + + N A T L Sbjct: 103 FKLALKDYKTVTKARPNDK---DAMIKYTECCKTL 134 >gi|209695367|ref|YP_002263296.1| hypothetical protein VSAL_I1900 [Aliivibrio salmonicida LFI1238] gi|208009319|emb|CAQ79585.1| putative exported protein [Aliivibrio salmonicida LFI1238] Length = 254 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 42/124 (33%), Gaps = 24/124 (19%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A +E++ YP+S +Y +G Y DV + +++ Sbjct: 148 KKKDYAGATKAFQEFVAAYPDSVYSSNAHYWLGQLYFAQKNDV--------EAAKSFTKV 199 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V Y +S A + KR AA +Q V+ YSD+ Sbjct: 200 VS-YADSNKRADALLKLGEL---------------AKRNNKAAAQKYYQKVITEYSDSTT 243 Query: 226 AEEA 229 A+ A Sbjct: 244 AQTA 247 >gi|47224137|emb|CAG13057.1| unnamed protein product [Tetraodon nigroviridis] Length = 303 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 15/141 (10%), Positives = 44/141 (31%), Gaps = 28/141 (19%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRD--FPFAGVARK-----------SLLMSAFVQYSAG 108 +K + K+ + +A + + +G+A + + L A Sbjct: 145 DKGTQYFKDGKYKQASVQYKKIVSWLEHE-SGLAEEDEKKAKALRLAAHLNLAMCFLKVK 203 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + QA ++ + ++ + G ++ M ++V+ Sbjct: 204 ELTQALENCDKALELDQSNEK---ALFRRGEAFFNM--------NEFDKAKNDFQQVVQL 252 Query: 169 YTNSPYVKGARFYVTVGRNQL 189 Y + A+ V + + ++ Sbjct: 253 YPTNK---AAKSQVALCQTRI 270 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 2/91 (2%) Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLK 69 + E + L ++A+CFL E + + ++ D ++ ++ + F Sbjct: 176 LAEEDEKKAKALRLAAHLNLAMCFLKVKELTQALENCDKALELDQSNEKALFRRGEAFFN 235 Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 F KA F Q + +P A KS + Sbjct: 236 MNEFDKAKNDFQQVVQLYPTNK-AAKSQVAL 265 >gi|113474349|ref|YP_720410.1| hypothetical protein Tery_0481 [Trichodesmium erythraeum IMS101] gi|110165397|gb|ABG49937.1| TPR repeat [Trichodesmium erythraeum IMS101] Length = 3145 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 45/137 (32%), Gaps = 18/137 (13%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 L++ A + + + P + + FV G +A + ++ I +P Sbjct: 1757 LQKGQIDLAIINYKKSRKINPNSSW---ININLGFVWEKNGNLPKANTYYQKAIEIHPNH 1813 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 + ++ Q +L ++Y + +E + + Y+ Sbjct: 1814 AEA-----------WCRLGNILQKQGQFELAIEYCQKSLELNPDYIEANHSLGYIFFQLG 1862 Query: 188 QLAA----KEVEIGRYY 200 +LA E I +YY Sbjct: 1863 KLAESQKYYEQAIKKYY 1879 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 38/111 (34%), Gaps = 18/111 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 AVL A + NQ +P F + + LM G+ ++A + ++ I Sbjct: 1034 AVLENLAGRNDIAIQLLNQVINLYPGFTEAYSNLAKLMK-----KEGRLEEAIAHYQKAI 1088 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + P + S + + ++ + + + +E N+ Sbjct: 1089 SLEPNNS-----------SNYSNLGFIFLEKGQIESAIINSEKSIEINPNN 1128 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 63/213 (29%), Gaps = 38/213 (17%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 AVL A + NQ P F + + LM G+ ++A + ++ I Sbjct: 1685 AVLENLAGRNDIAIQLLNQVINLNPGFTKAYSNLAKLMK-----KEGRLEEAIAHYQKAI 1739 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV------ 175 P + S + + + L + + + NS ++ Sbjct: 1740 ELEPNNS-----------SNYSSLGWIFLQKGQIDLAIINYKKSRKINPNSSWININLGF 1788 Query: 176 --------KGAR---FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 A A +G K+G++ AI Q L D Sbjct: 1789 VWEKNGNLPKANTYYQKAIEIHPNHAEAWCRLGNILQKQGQFELAIEYCQKSLELNPD-- 1846 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 EA L + L + E+++ ++Y Sbjct: 1847 -YIEANHSLGYIFFQLGKLAESQKYYEQAIKKY 1878 Score = 35.1 bits (80), Expect = 9.9, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 57/171 (33%), Gaps = 36/171 (21%) Query: 61 YEKA-----VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 Y +A V+ LK+ A EYF + P A ++ FV G +A++ Sbjct: 1196 YAEAWCNLGVILLKQGQIELAIEYFRKSLELNP--DYA-QAYNNLGFVFQEKGNLSKASN 1252 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 ++ + P Y + V Q +L ++Y + +E + Y Sbjct: 1253 YYQQALEINPN-----YAE---AWCN---LGVVLRKQGQIELAIEYFRKSLELNPD--YA 1299 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + N L G + + G + A+I +Q L + Sbjct: 1300 --------MTHNSL-------GVTFEEEGNFTASIASYQKALELEPNFPEV 1335 >gi|166363102|ref|YP_001655375.1| TPR repeat-containing protein [Microcystis aeruginosa NIES-843] gi|166085475|dbj|BAG00183.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843] Length = 1179 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 48/143 (33%), Gaps = 17/143 (11%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 + Y + L+ +Q + A +++ P A K+ + + KY+ A S Sbjct: 958 AKVYYNRGNLYYNQQKYDLALSDYSKAIEINP--NYA-KAYYNRGNLYKNLQKYELALSD 1014 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + I P YY G+ Y Q+ L L S+ ++ N Sbjct: 1015 YSKAIDINP---KFAEAYYNRGLLYYN--------QQKYDLALSDFSKAIDINPND---A 1060 Query: 177 GARFYVTVGRNQLAAKEVEIGRY 199 GA + L E+ + Y Sbjct: 1061 GAYNNRGNLYSDLQKYELALSDY 1083 Score = 42.8 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 18/121 (14%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKY 110 + ++ Y + +L+ +Q + A F++ P + L KY Sbjct: 1022 NPKFAEAYYNRGLLYYNQQKYDLALSDFSKAIDINPNDAGAYNNRGNL-----YSDLQKY 1076 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + A S + I P N YY G+ Y Q+ L L S+ ++ Sbjct: 1077 ELALSDYSKAIDINPNYAN---AYYNRGLLYYN--------QQKYDLALSDFSKAIDINP 1125 Query: 171 N 171 N Sbjct: 1126 N 1126 >gi|167034191|ref|YP_001669422.1| cellulose synthase subunit BcsC [Pseudomonas putida GB-1] gi|166860679|gb|ABY99086.1| cellulose synthase operon C domain protein [Pseudomonas putida GB-1] Length = 1186 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 67/204 (32%), Gaps = 22/204 (10%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 A + + +P + R++L F + + A +L ++ +++ P +++ Sbjct: 161 GQRPGAIRQLQRLDQQYPGSAGLRQTLAGWLFAEKRDRE---ALALLDQ-LSRDPGARDA 216 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 AQ D Q + V+RY SP + A + R LA Sbjct: 217 A----------AQREFDYLAGQAVSASSAVAWQAFVQRYPASPLLAQASENLQQQRKLLA 266 Query: 191 AKEVEI---GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA---YVALALMD 244 + G+ L +G + A + + L Y D A+ + + Y Sbjct: 267 DPAWQAGQRGKALLDKGRHAEAEAQLRRALRQYPDDASLHGALGYALMSQKRYDQANASF 326 Query: 245 EAREVVSLIQERYPQGYWARYVET 268 A Q+ Y W+ V Sbjct: 327 RAATDKE--QDSYKISKWSDMVSA 348 >gi|108759667|ref|YP_634061.1| TPR domain-containing protein [Myxococcus xanthus DK 1622] gi|108463547|gb|ABF88732.1| TPR domain protein [Myxococcus xanthus DK 1622] Length = 446 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 24/90 (26%), Gaps = 7/90 (7%) Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 +M A Y + +A + + P + Y + D D A K Sbjct: 196 VMQANALYLSNDSGKALVAYDAVLEVEPLHEE---ALYARAALLFETKGD---DVAALKK 249 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 + + Y +S A + Sbjct: 250 AGEGFEAVATTYPDSFRAPMA-KRMVALVE 278 >gi|254465798|ref|ZP_05079209.1| TPR domain protein [Rhodobacterales bacterium Y4I] gi|206686706|gb|EDZ47188.1| TPR domain protein [Rhodobacterales bacterium Y4I] Length = 188 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 40/125 (32%), Gaps = 14/125 (11%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + + ++ + +A E+ + P A + A V ++ G Y + + E Sbjct: 71 LLRRGTDAIERGDLQQAAEHLTALTDHAP--EFA-RGWYQRARVYFAMGLYGPSVADLER 127 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P+ + Y G + + R+ Q R + + V A Sbjct: 128 ALALNPQDYDAIYAL---G-ALFEQFREPSR-------AYQAYQRAKAIHPHHEEVSSAL 176 Query: 180 FYVTV 184 + + Sbjct: 177 ERLKL 181 >gi|119496609|ref|XP_001265078.1| DnaJ domain protein [Neosartorya fischeri NRRL 181] gi|119413240|gb|EAW23181.1| DnaJ domain protein [Neosartorya fischeri NRRL 181] Length = 688 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 68/208 (32%), Gaps = 21/208 (10%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 F K+ N+++A E F + P + + L A SA +Y +A E + Sbjct: 203 AGNKFFKDGNYNRAIEEFTKAIEINPSSSI---YLSNRAAAYLSANRYLEALEDAERALE 259 Query: 123 QYPESKNVDY--VYYLVGMSY-AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 P++ + Y L + ++ + + Q + ++R+ A Sbjct: 260 LDPDNSKIMYRLARILTALGRPSEALEVLSRVQPPASATDRAAPEKMQRFIKQAEETLAE 319 Query: 180 FY--------VTVGRNQLAA--KE-----VEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + R L KE + LK G + + ++ + Sbjct: 320 DRGVSMVLFCIEQARQLLGRGVKEPRKWTLLTAEAQLKMGNENSLRKAQDIAISMLRENN 379 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSL 252 +A+ AY L ++A + + + Sbjct: 380 QDPDALMIRARAYYGLGESEQALKTLKM 407 >gi|332883201|gb|EGK03484.1| hypothetical protein HMPREF9456_01551 [Dysgonomonas mossii DSM 22836] Length = 383 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 70/221 (31%), Gaps = 30/221 (13%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 +SR + L + R Y K ++ + A F + P A + + Sbjct: 79 NASRYIDLSVQKSAKCARAYYVKGLVQNANGSADDAKGSFEKAIAISP--NFA-DAYVGL 135 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 V + +A ++ + P S+ +Y++G+ YA L Sbjct: 136 GDVFLAKEDTDKALENYKKATSFNPPSEK---AFYMIGVIYASRDDLSD--------ALN 184 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 A+ + + L I R G Y A ++ ++ Sbjct: 185 VFYT-------------AKDKIEKDKELLVTVLYNIARIEYDFGRYTKAAEAYEELVGYL 231 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 D ++ E +LV YV L ++A + + Y +G Sbjct: 232 PDDYYSYE---KLVHCYVKLGEYNKAATSKTKLYNAYKEGQ 269 >gi|242281032|ref|YP_002993161.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio salexigens DSM 2638] gi|242123926|gb|ACS81622.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio salexigens DSM 2638] Length = 587 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 44/176 (25%), Gaps = 15/176 (8%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK-EQNFS 74 + + L + +A + + D T Q K K + Sbjct: 1 MRKFFIPNLIMALFLAGLLVSVIPASAFGASIKDDFTIAWKQFHALSKNQKKAKYRSEWE 60 Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPES 127 K + F + A KSL G ++ A I+ +P Sbjct: 61 KVGKKFRNVFKRSTRGQYAPKSLYYLGRTYEELGNRSGIKKDFRTAVDYYGRMISNFPSH 120 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 + D Y + + + IV RY S AR + Sbjct: 121 QWTDDSIYRRAEIRLRKLHEKDL-------AYSDYLTIVHRYAKSDMYSQARKRLD 169 Score = 35.9 bits (82), Expect = 6.7, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 10/77 (12%) Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA-------LMDEAREV 249 +Y R E+ +F+ V + ++A +++ L Y L A + Sbjct: 53 AKY---RSEWEKVGKKFRNVFKRSTRGQYAPKSLYYLGRTYEELGNRSGIKKDFRTAVDY 109 Query: 250 VSLIQERYPQGYWARYV 266 + +P W Sbjct: 110 YGRMISNFPSHQWTDDS 126 >gi|118581737|ref|YP_902987.1| hypothetical protein Ppro_3337 [Pelobacter propionicus DSM 2379] gi|118504447|gb|ABL00930.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM 2379] Length = 361 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 54/161 (33%), Gaps = 23/161 (14%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S++ + E+Y +A L ++ +A Q P +A Sbjct: 201 SQETTDVARQPSLAADELYRRAQEQLSARDDDQALLTLEQLVTQEPDNALAHN---DLGV 257 Query: 103 VQYSAGKYQQAASLGEEYITQYPES----KNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 + G +QA E + P + KN+ Y Y+ + R T Sbjct: 258 LHTRRGDLEQALLHHETAVRNNPANTTFQKNLA-ALY-----YSCLGR--------TDEA 303 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-VEIGR 198 + +R++ Y + V A + N+L + + IGR Sbjct: 304 ITIYTRLLREYPDDVEVLTALA-IISAANRLGEQARLFIGR 343 >gi|297380454|gb|ADI35341.1| paralysed flagella protein [Helicobacter pylori v225d] Length = 789 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 174 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 233 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP ++ V Y V + + K ++Y RI+ Sbjct: 234 IKKSLLIDIGTKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 285 Query: 168 RYTNSPYVKGARFYVTV 184 Y NS Y A+ + + Sbjct: 286 EYKNSRYAPLAQMRLAI 302 Score = 42.4 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 203 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPSIPEVLYY 262 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 263 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 301 >gi|294678315|ref|YP_003578930.1| hypothetical protein [Rhodobacter capsulatus SB 1003] gi|294477135|gb|ADE86523.1| TPR repeat domain protein [Rhodobacter capsulatus SB 1003] Length = 186 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 42/159 (26%), Gaps = 18/159 (11%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 F +A GW+ S S + + ++ + + A E+ + Sbjct: 36 FSELADPGYAGWQSAESDIRRAWSRSGSSTMDLLLKRGEEAMDAGDLPAAIEHLTALTDH 95 Query: 87 FP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 P F ++ Y AG+ A + + + P L G+ Sbjct: 96 APDFPEGWNARAT-----AYYMAGQLGPAMADIAQVLRLEPRHWGA-----LAGLGM--- 142 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 + D L + VK + + Sbjct: 143 ---IFADMGDRARALSAFRASFALNPHQQDVKDSITRLE 178 >gi|262167806|ref|ZP_06035507.1| TPR domain protein in aerotolerance operon [Vibrio cholerae RC27] gi|262023714|gb|EEY42414.1| TPR domain protein in aerotolerance operon [Vibrio cholerae RC27] Length = 622 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 F+L + F +++ W S + D + E Y +A ++ + A Y+ Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379 Query: 82 QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + ++ + A AG+ Q+A L E+ + Q P ++ Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433 >gi|229506664|ref|ZP_04396173.1| TPR domain protein in aerotolerance operon [Vibrio cholerae BX 330286] gi|229357015|gb|EEO21933.1| TPR domain protein in aerotolerance operon [Vibrio cholerae BX 330286] Length = 636 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 F+L + F +++ W S + D + E Y +A ++ + A Y+ Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379 Query: 82 QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + ++ + A AG+ Q+A L E+ + Q P ++ Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433 >gi|227811795|ref|YP_002811805.1| hypothetical protein VCM66_A0167 [Vibrio cholerae M66-2] gi|227010937|gb|ACP07148.1| conserved hypothetical protein [Vibrio cholerae M66-2] Length = 628 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 F+L + F +++ W S + D + E Y +A ++ + A Y+ Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379 Query: 82 QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + ++ + A AG+ Q+A L E+ + Q P ++ Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433 >gi|298500026|ref|ZP_07009832.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|297542007|gb|EFH78058.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 626 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 F+L + F +++ W S + D + E Y +A ++ + A Y+ Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379 Query: 82 QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + ++ + A AG+ Q+A L E+ + Q P ++ Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433 >gi|153816861|ref|ZP_01969528.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|126512664|gb|EAZ75258.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] Length = 630 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 F+L + F +++ W S + D + E Y +A ++ + A Y+ Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379 Query: 82 QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + ++ + A AG+ Q+A L E+ + Q P ++ Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433 >gi|121586717|ref|ZP_01676500.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121549014|gb|EAX59051.1| conserved hypothetical protein [Vibrio cholerae 2740-80] Length = 642 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 F+L + F +++ W S + D + E Y +A ++ + A Y+ Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379 Query: 82 QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + ++ + A AG+ Q+A L E+ + Q P ++ Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433 >gi|147671681|ref|YP_001215943.1| hypothetical protein VC0395_1107 [Vibrio cholerae O395] gi|146314064|gb|ABQ18604.1| conserved hypothetical protein [Vibrio cholerae O395] gi|227014796|gb|ACP11005.1| conserved hypothetical protein [Vibrio cholerae O395] Length = 646 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 F+L + F +++ W S + D + E Y +A ++ + A Y+ Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379 Query: 82 QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + ++ + A AG+ Q+A L E+ + Q P ++ Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433 >gi|121728215|ref|ZP_01681249.1| conserved hypothetical protein [Vibrio cholerae V52] gi|121629538|gb|EAX61962.1| conserved hypothetical protein [Vibrio cholerae V52] Length = 652 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 F+L + F +++ W S + D + E Y +A ++ + A Y+ Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379 Query: 82 QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + ++ + A AG+ Q+A L E+ + Q P ++ Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433 >gi|323698623|ref|ZP_08110535.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfovibrio sp. ND132] gi|323458555|gb|EGB14420.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfovibrio desulfuricans ND132] Length = 884 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 72/225 (32%), Gaps = 36/225 (16%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E+ + + N+S A + + P K+ L A + GK QA E+Y Sbjct: 29 EEGEQYRNDGNYSGAIVIYKTILDEHPNE---LKARLGLAKSYLATGKLDQARKNFEKYQ 85 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK----- 176 Q P K + Y + + + L+Y + + Y S Sbjct: 86 LQNPYDKELGY-----------DLARLERLSQNKPKALEYAAAYCKDYPESVEGALLFGH 134 Query: 177 ---------GARFYVTVGRNQLA----AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 A + + QLA + + + Y RG AA VLA Sbjct: 135 LLLEGGNDVQAEEWFSKAL-QLAPENTEARIGLAQVYKSRGRKDAADKAIAEVLAKDPT- 192 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 EA+ + R+ + I + YP +A+Y++ Sbjct: 193 --NREALYFKAGRELEDKNKKAYRQTFTAISDAYPHDAYAKYIKA 235 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 18/137 (13%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-- 94 G + + + + D + +Y KA L+++N + F S +P A+ Sbjct: 174 GRKDAADKAIAEVLAKDPTNREALYFKAGRELEDKNKKAYRQTFTAISDAYPHDAYAKYI 233 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 K+ M K+ AA L +E + + + Y VG+S Q+ Sbjct: 234 KAQAML-----EEKKFDTAAQLAKELRSM---APKMPYADKTVGLSMYL--------QKN 277 Query: 155 TKLMLQYMSRIVERYTN 171 + + + + + Sbjct: 278 YQEAINAYHKAISIRPD 294 >gi|209525366|ref|ZP_03273907.1| Lytic transglycosylase catalytic [Arthrospira maxima CS-328] gi|209494217|gb|EDZ94531.1| Lytic transglycosylase catalytic [Arthrospira maxima CS-328] Length = 730 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 66/214 (30%), Gaps = 33/214 (15%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARKSLLMSAFVQYSAGK 109 + R +Y A ++ + + FP A + A + Sbjct: 256 KTPRNMYRHARGLWLSGKIPESRRAYQELIAAFPTQTDPGGEDAGLGRIRLA----RLVE 311 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 ++A L + + +P ++ R+T+ Q ++ +Y Sbjct: 312 PREALPLLNQVVDNFPNH--AAEALLERANVLDKL--------RSTETASQSRQLLLSQY 361 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 ++S R LA + GR L A + ++ D+E A +A Sbjct: 362 SDSEPAAQ-------LRWTLAQQGATAGRLDL-------ASEWARQLITKNPDSELAPQA 407 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 L +A + + RYP+ Y+A Sbjct: 408 TFMLGRWARQQGNSQDATKAFEYLLARYPESYYA 441 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 8/72 (11%) Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 AG+ A+ + IT+ P+S+ +++G Q ++ + ++ Sbjct: 381 AGRLDLASEWARQLITKNPDSELAPQATFMLG--------RWARQQGNSQDATKAFEYLL 432 Query: 167 ERYTNSPYVKGA 178 RY S Y A Sbjct: 433 ARYPESYYAWRA 444 >gi|299147144|ref|ZP_07040211.1| putative TPR domain protein [Bacteroides sp. 3_1_23] gi|298515029|gb|EFI38911.1| putative TPR domain protein [Bacteroides sp. 3_1_23] Length = 597 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 36/198 (18%) Query: 61 YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y + ++ L ++ KA + FP SLL KY S Sbjct: 129 YSQGLVSLYQQQNELDKAAALLEKMVTRFPSKQDPLFSLLDI---YSRQEKYNDVISTLN 185 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + +++ + + + Y QM D K Q + +V+ Y Sbjct: 186 RLEKRLGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVQEYP-------- 226 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + +V +G YL+ G+ A +Q VLA D A+ + Y Sbjct: 227 ---MDM------RYQVILGDVYLQNGKKQEAYDAYQKVLAVEPD---NPMALFSMASYYE 274 Query: 239 ALALMDEAREVVSLIQER 256 + ++ + + Sbjct: 275 QTGQKELYQQQLDTLLLN 292 >gi|194748531|ref|XP_001956698.1| GF24452 [Drosophila ananassae] gi|190623980|gb|EDV39504.1| GF24452 [Drosophila ananassae] Length = 1164 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 24/141 (17%) Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179 Y L+ + + RD +++ + L +++ + + + Sbjct: 601 AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHK 660 Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 V R+ A +E + I Y+++ +Y++AI ++ + + + E Sbjct: 661 GCVIEARDIFAQVREATADFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNV-EV 719 Query: 230 MARLVEAYVALALMDEAREVV 250 M L AY+ + EA+ V+ Sbjct: 720 MQYLARAYLRANKLVEAKAVL 740 >gi|124087400|ref|XP_001346840.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|145474967|ref|XP_001423506.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|50057229|emb|CAH03213.1| Conserved hypothetical protein, TPR domain [Paramecium tetraurelia] gi|124390566|emb|CAK56108.1| unnamed protein product [Paramecium tetraurelia] Length = 1084 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 2/65 (3%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A + N+ + +YF + + P +A K+ L A+ Y+ +Y A + + Sbjct: 170 TAQAYFAVGNYKDSLQYFKRALKHKP--NIAGKARLGLAYCYYNLEQYSLAYYAFKRVLQ 227 Query: 123 QYPES 127 P + Sbjct: 228 LEPRN 232 >gi|317059242|ref|ZP_07923727.1| tetratricopeptide repeat family protein [Fusobacterium sp. 3_1_5R] gi|313684918|gb|EFS21753.1| tetratricopeptide repeat family protein [Fusobacterium sp. 3_1_5R] Length = 917 Score = 43.6 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 27/71 (38%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ A + E+ + +A + +P A ++ A AG + + + Sbjct: 622 FQIADTYYNEKKYQEAANQYKDLFTAYPNGKYAEQARYWYANSLAMAGNQAAFTTEKQNF 681 Query: 121 ITQYPESKNVD 131 + YP S VD Sbjct: 682 MRDYPNSSFVD 692 Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 39/102 (38%), Gaps = 14/102 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R LQ + ++ Y +S + RNQ +G+ Y + EY A + Sbjct: 38 RNFDAALQQSVQYIKNYPSSS-------RILEMRNQ-------VGKLYFIKREYSKAREQ 83 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 F+ +LA E L Y AL D+ R ++ I+ Sbjct: 84 FRAILAMEPSGSTKNETYYYLARIYAALGENDQNRFALTQIK 125 >gi|305855148|ref|NP_001182266.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Sus scrofa] gi|285818414|gb|ADC38880.1| FK506 binding protein 4 [Sus scrofa] Length = 456 Score = 43.6 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 43/144 (29%), Gaps = 26/144 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109 E+ ++ KE + +A + + + A+K+ L A Sbjct: 275 ERGTVYFKEGKYKQALVQYKKIVSWLEYESSFSNEDAQKAQALRLASHLNLAMCYLKLQS 334 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + D ++++ Y Sbjct: 335 FSAAIENCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 383 Query: 170 TNSPYVKGARFYV--TVGRNQLAA 191 S A+ + R QLA Sbjct: 384 P-SNKAAKAQLALCQQRIRKQLAR 406 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 33/80 (41%), Gaps = 2/80 (2%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYF 80 L ++A+C+L ++ + ++ D ++ ++ + L +F A F Sbjct: 317 LRLASHLNLAMCYLKLQSFSAAIENCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADF 376 Query: 81 NQCSRDFPFAGVARKSLLMS 100 + + +P + A K+ L Sbjct: 377 QKVLQLYP-SNKAAKAQLAL 395 >gi|225873829|ref|YP_002755288.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC 51196] gi|225792798|gb|ACO32888.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC 51196] Length = 734 Score = 43.6 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 74/205 (36%), Gaps = 26/205 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-MSAFVQYSAGKYQQAASLGEEY 120 E A+ + +S+A E F+ P + +LL A ++ AG A SL ++ Sbjct: 120 ELAIARAQAGQYSQAAENFDAALALAPNSP----ALLVEYARSEFQAGNLPHAKSLAQQI 175 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I QYP +KN + S + D +A + L + + N + A Sbjct: 176 IQQYPHNKNA----LVRAYSILGRTQLAQQDAKAARKNLALAVALKPNFPNGYNLAAACL 231 Query: 181 YVTVGR-------NQLAAK------EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 + + + A+ + G+ YL AI F+ +A A Sbjct: 232 ALEDQKCAAKIFSDMQASYGNTAVLHMYFGQAYLNSDFQRLAIAEFEKAIALNPKLPGAH 291 Query: 228 EAMARLVEAYVALAL-MDEAREVVS 251 L AY+A +D+A + + Sbjct: 292 ---YSLAAAYLATQQSIDKAEDELR 313 >gi|195490356|ref|XP_002093105.1| GE21142 [Drosophila yakuba] gi|194179206|gb|EDW92817.1| GE21142 [Drosophila yakuba] Length = 1148 Score = 43.6 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 24/141 (17%) Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179 Y L+ + + RD +++ + L +++ + + + Sbjct: 601 AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHK 660 Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 V R+ A +E + I Y+++ +Y++AI ++ + + + E Sbjct: 661 GCVIEARDIFAQVREATADFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNV-EV 719 Query: 230 MARLVEAYVALALMDEAREVV 250 M L AY+ + EA+ V+ Sbjct: 720 MQYLARAYLRANKLVEAKAVL 740 >gi|257452701|ref|ZP_05618000.1| TPR repeat-containing protein [Fusobacterium sp. 3_1_5R] gi|257466562|ref|ZP_05630873.1| TPR repeat-containing protein [Fusobacterium gonidiaformans ATCC 25563] gi|315917717|ref|ZP_07913957.1| tetratricopeptide repeat family protein [Fusobacterium gonidiaformans ATCC 25563] gi|313691592|gb|EFS28427.1| tetratricopeptide repeat family protein [Fusobacterium gonidiaformans ATCC 25563] Length = 915 Score = 43.6 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 27/71 (38%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ A + E+ + +A + +P A ++ A AG + + + Sbjct: 620 FQIADTYYNEKKYQEAANQYKDLFTAYPNGKYAEQARYWYANSLAMAGNQAAFTTEKQNF 679 Query: 121 ITQYPESKNVD 131 + YP S VD Sbjct: 680 MRDYPNSSFVD 690 Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 39/102 (38%), Gaps = 14/102 (13%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 R LQ + ++ Y +S + RNQ +G+ Y + EY A + Sbjct: 36 RNFDAALQQSVQYIKNYPSSS-------RILEMRNQ-------VGKLYFIKREYSKAREQ 81 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 F+ +LA E L Y AL D+ R ++ I+ Sbjct: 82 FRAILAMEPSGSTKNETYYYLARIYAALGENDQNRFALTQIK 123 >gi|194864807|ref|XP_001971117.1| GG14779 [Drosophila erecta] gi|190652900|gb|EDV50143.1| GG14779 [Drosophila erecta] Length = 1150 Score = 43.6 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 24/141 (17%) Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179 Y L+ + + RD +++ + L +++ + + + Sbjct: 601 AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHK 660 Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 V R+ A +E + I Y+++ +Y++AI ++ + + + E Sbjct: 661 GCVIEARDIFAQVREATADFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNV-EV 719 Query: 230 MARLVEAYVALALMDEAREVV 250 M L AY+ + EA+ V+ Sbjct: 720 MQYLARAYLRANKLVEAKAVL 740 >gi|307150171|ref|YP_003885555.1| Sigma 54 interacting domain-containing protein [Cyanothece sp. PCC 7822] gi|306980399|gb|ADN12280.1| Sigma 54 interacting domain protein [Cyanothece sp. PCC 7822] Length = 1290 Score = 43.6 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 11/106 (10%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E+Y+KAV LK + + + + +P K+ +Y +A Sbjct: 1190 NELYQKAVEKLKAKEWKTGIAILTRSIQIYPQNF---KAYYDRGLAFIELKQYYRAIDDF 1246 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 E + YP Y+Y G Y ++ + Q+A + Sbjct: 1247 NEVLRFYPN----AYIYDKRGECYGKLGNE----QQAAADFQKARE 1284 Score = 42.8 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 33/94 (35%), Gaps = 15/94 (15%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 A +++ ++ I YP++ YY G+++ ++ + + + + Sbjct: 1201 KAKEWKTGIAILTRSIQIYPQNFK---AYYDRGLAFIEL--------KQYYRAIDDFNEV 1249 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + Y N Y+ +L ++ + Sbjct: 1250 LRFYPN-AYIYD---KRGECYGKLGNEQQAAADF 1279 >gi|161870308|ref|YP_001599478.1| periplasmic protein [Neisseria meningitidis 053442] gi|161595861|gb|ABX73521.1| periplasmic protein [Neisseria meningitidis 053442] gi|261392299|emb|CAX49825.1| conserved hypothetical TPR-containing periplasmic protein [Neisseria meningitidis 8013] Length = 238 Score = 43.6 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S V + +Y +A+ K FS A +A++S+ + + G Sbjct: 112 SAHTVETAQNLYNQALKHYKSGRFSAAASLLKGADGGD-GGSIAQRSMYLLLQSRARMGN 170 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168 + +G Y ++ +S + +G + +D+ +++ Sbjct: 171 CESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIAR---------ATWRSLIQA 221 Query: 169 YTNSP 173 Y +SP Sbjct: 222 YPSSP 226 Score = 35.1 bits (80), Expect = 9.9, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 18/43 (41%) Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + D+ A EA+ ++ E L D AR + + YP Sbjct: 184 RFKDSPTAPEAIFKIGECQYRLQQKDIARATWRSLIQAYPSSP 226 >gi|156933752|ref|YP_001437668.1| tetratricopeptide repeat protein [Cronobacter sakazakii ATCC BAA-894] gi|156532006|gb|ABU76832.1| hypothetical protein ESA_01578 [Cronobacter sakazakii ATCC BAA-894] Length = 389 Score = 43.6 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 64/195 (32%), Gaps = 42/195 (21%) Query: 64 AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + +A FNQ DF + + + A +Q+A E + Sbjct: 114 GRDYMAAGLYDRAEGMFNQLVDETDFRVGALQQLLQIYQA-----TSDWQKAIDAAERLV 168 Query: 122 TQYPESKNVDYVYY-----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 E + V+ ++ L MS M R + + + NS Sbjct: 169 KLGKEHQRVEIAHFYCELALQAMSNEDMDR-----------AMSLLKKGAAADRNS---- 213 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 A + +GR ++ RG+Y A+ + V++ D E E + L Sbjct: 214 -------------ARVSIMMGRIFMARGDYAHAVEMLEKVIS--QDRELVSETLEMLQVC 258 Query: 237 YVALALMDEAREVVS 251 Y L DE E + Sbjct: 259 YQQLGKPDEWAEFLR 273 >gi|110637714|ref|YP_677921.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406] gi|110280395|gb|ABG58581.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406] Length = 515 Score = 43.6 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 76/259 (29%), Gaps = 59/259 (22%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP------FA 90 G+ ++ D D Y +A + ++ +++ P F Sbjct: 247 GFRDEAIADFTTAIKYDSSYAEAYQNRAHELFLLSRYEESITDYSKVIALQPDNFQAYFG 306 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 K+ GK+ +A + + I YP N Y Y+ G S + + Sbjct: 307 RGQSKAEF---------GKHVEAIADYNKAIVLYP---NFTYAYFYRGFSKSYLDNFSD- 353 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY----------- 199 ++ ++ ++ N A F + + E I Y Sbjct: 354 -------AIKDFNKAIQLDPND---HPAYFNRAYCKREEGDYEGAIKDYNKCISLKPQYE 403 Query: 200 --YLK-------RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR--- 247 Y + G+ AAI + ++ + + E+ A + + + + Sbjct: 404 EAYFQKANTLYMMGDKTAAIKEYDEIVKKFPN-----ESAAYANRGFFNMNIKKDKEAMD 458 Query: 248 --EVVSLIQERYPQGYWAR 264 + E P+ Y R Sbjct: 459 DFNKAITLNENNPEAYRYR 477 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 53/154 (34%), Gaps = 17/154 (11%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 + +D D + +A +E ++ A + +N+C P ++ Sbjct: 352 SDAIKDFNKAIQLDPNDHPAYFNRAYCKREEGDYEGAIKDYNKCISLKP--QY-EEAYFQ 408 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 A Y G A +E + ++P +++ Y G + +D K + Sbjct: 409 KANTLYMMGDKTAAIKEYDEIVKKFP-NESAAYAN--RGFFNMNIKKD--------KEAM 457 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 ++ + + A Y V ++++ KE Sbjct: 458 DDFNKAITL---NENNPEAYRYRAVLKSEIKDKE 488 Score = 35.5 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 60/187 (32%), Gaps = 37/187 (19%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + + + K+ NF AY+ F + P ++ + G Y A + ++ Sbjct: 169 FNEGLELFKKGNFIGAYDKFKAAAVADPNGY---EAYYYMGLCKMELGDYPAAITNFDKA 225 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I P+ + GMS ++ D + + ++ +S Y + + Sbjct: 226 IDIKPKYTA---AFSKRGMS---KSKEGFRD-----EAIADFTTAIKY--DSSYAEAYQN 272 Query: 181 YVTVGRNQLAAKEVEIGRY-------------YLKR-------GEYVAAIPRFQLVLANY 220 L+ E I Y Y R G++V AI + + Y Sbjct: 273 RAHELF-LLSRYEESITDYSKVIALQPDNFQAYFGRGQSKAEFGKHVEAIADYNKAIVLY 331 Query: 221 SDAEHAE 227 + +A Sbjct: 332 PNFTYAY 338 >gi|77021665|gb|ABA60691.1| polaris [Danio rerio] Length = 824 Score = 43.6 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 32/258 (12%), Positives = 80/258 (31%), Gaps = 53/258 (20%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 Q+ R L D + K ++++ KA E++ + R+ + +L Sbjct: 469 QADRYAELAMSADRYNPAALINKGNTLFVKEDYEKAAEFYKESLRND--SSCTE-ALYNL 525 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIRD 147 G+ ++A ++ + +N V Y + Y Q+ Sbjct: 526 GLTYKRLGRLEEALDC---FLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLTSV 582 Query: 148 VPYDQRAT-------------KLMLQYMSRIVERYT--------------NSPYVKGARF 180 P D + QY + ++ + + A Sbjct: 583 TPTDAQVLAKLGDLYDNEGDKSQAFQYYYESYRYFPSNISVIEWLGAYYIDTQFCEKAIQ 642 Query: 181 ---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 T+ + ++ + Y + G Y+ A+ ++ + + + E + LV Sbjct: 643 YFERATLIQPTQVKWQLMVASCYRRSGNYLKALETYKEIHRKFPE---NVECLRFLVRLC 699 Query: 238 VALALMDEAREVVSLIQE 255 + L E ++ + +++ Sbjct: 700 TDMGLK-EVQDYATKLKK 716 >gi|42523907|ref|NP_969287.1| hypothetical protein Bd2474 [Bdellovibrio bacteriovorus HD100] gi|39576114|emb|CAE80280.1| conserved hypothetical protein ybgf [Bdellovibrio bacteriovorus HD100] Length = 175 Score = 43.6 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 17/135 (12%) Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 +G+ YA+M+ D + ++ RY S Y A Sbjct: 55 IGL-YAEMVSAYQADDEIAFKSR--LQSLLSRYPQSSYADNAL--------------FVA 97 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 GR + G Y AI F + Y + A Y + L + +R+ + ++ R Sbjct: 98 GRMAVDHGNYAEAIKYFAQIEKQYPRSNKVAAAKFAKAMTYKKMNLPEFSRKALLEVRSR 157 Query: 257 YPQGYWARYVETLVK 271 YP + + +K Sbjct: 158 YPGSPESFRADAELK 172 Score = 35.9 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 27/79 (34%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 ++ + + N+++A +YF Q + +P + + A Sbjct: 85 PQSSYADNALFVAGRMAVDHGNYAEAIKYFAQIEKQYPRSNKVAAAKFAKAMTYKKMNLP 144 Query: 111 QQAASLGEEYITQYPESKN 129 + + E ++YP S Sbjct: 145 EFSRKALLEVRSRYPGSPE 163 >gi|330793163|ref|XP_003284655.1| hypothetical protein DICPUDRAFT_45625 [Dictyostelium purpureum] gi|325085454|gb|EGC38861.1| hypothetical protein DICPUDRAFT_45625 [Dictyostelium purpureum] Length = 515 Score = 43.6 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 43/130 (33%), Gaps = 24/130 (18%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 KA + EQ + A E + + + +P A + ++ F + Y A I Sbjct: 59 KANKYFAEQKYDLATELYTKAIKYYPTAILYSNRA-----FSNFKREYYVNALQDAT--I 111 Query: 122 TQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + + N Y YY +G ++ + + ++ + K A+ Sbjct: 112 S-HQMDPN--YIKAYYRLGSAHLAL--------GNYNEAKKNFKELLNKEPK---EKDAK 157 Query: 180 FYVTVGRNQL 189 + + + Sbjct: 158 IKFNLCNSLI 167 >gi|313159211|gb|EFR58584.1| tetratricopeptide repeat protein [Alistipes sp. HGB5] Length = 272 Score = 43.6 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 10/85 (11%), Positives = 24/85 (28%), Gaps = 3/85 (3%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 E+++ A NF A E + + + K A + Sbjct: 32 AEQSESAPRPTTDELWDMANTAYINGNFHSAAEVYEEILSR---GVSSVKLYYNLANAYF 88 Query: 106 SAGKYQQAASLGEEYITQYPESKNV 130 + +A + + P + ++ Sbjct: 89 KEDRIGKAILYYKRALRLAPGNDDI 113 >gi|307721736|ref|YP_003892876.1| Tetratricopeptide repeat-containing protein [Sulfurimonas autotrophica DSM 16294] gi|306979829|gb|ADN09864.1| Tetratricopeptide repeat protein [Sulfurimonas autotrophica DSM 16294] Length = 784 Score = 43.6 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 59/174 (33%), Gaps = 26/174 (14%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPES-KNVDYV-YYLVGMSYAQMIRDVPYDQR 153 S + F Y + I P K ++ V YL Y + ++ Sbjct: 142 SQIALNFPFYLDKDKLPYVGSLD--IKGNPVHIKKIEDVKEYLKVKKYYK--------EK 191 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 + LQ ++ +++ Y N+ + +Y + Y K ++ I Sbjct: 192 QYESCLQTVNDVLKTYPNTLFRAELLYYKI--------------KVYAKIKDWDNVISYA 237 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 + L YS E+ E ++ + +AY L +A + + +A+Y Sbjct: 238 KEFLREYSSDENVAEVLSLMAKAYAKLGQNTDADYFFDRLFTEHTDTKFAQYGY 291 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 8/116 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K + KE+ + + N + +P + L V + S +E+ Sbjct: 181 YLKVKKYYKEKQYESCLQTVNDVLKTYPNTLFRAELLYYKIKVYAKIKDWDNVISYAKEF 240 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + +Y +NV V L+ +YA++ ++ D + R+ +T++ + + Sbjct: 241 LREYSSDENVAEVLSLMAKAYAKLGQNTDAD--------YFFDRLFTEHTDTKFAQ 288 >gi|158337072|ref|YP_001518247.1| TPR domain-containing protein [Acaryochloris marina MBIC11017] gi|158307313|gb|ABW28930.1| TPR domain protein [Acaryochloris marina MBIC11017] Length = 594 Score = 43.6 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 66/186 (35%), Gaps = 35/186 (18%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + V + NF A + +++ + A + + + G + A + + I Sbjct: 231 QGVEKYGKGNFKGAIQDYDKAIQIN--GNYA-LAYVNRGYAHTVLGNSKSAIADYTKVIQ 287 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 P++ + +Y G+++A + LQ +++++R +P Y+ Sbjct: 288 LNPKNIELTKIYLNRGLAFAAA--------KNYPAALQDFNQVLQRDAKNPEA-----YL 334 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE--AYVAL 240 GR A+ G ++AAI + V+ + A+A AY + Sbjct: 335 NRGRAHAAS------------GNHLAAIQDYGQVIKFQPKS-----ALAYFNRGVAYSKV 377 Query: 241 ALMDEA 246 A Sbjct: 378 GDNATA 383 Score = 39.3 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 21/184 (11%), Positives = 48/184 (26%), Gaps = 30/184 (16%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + + N A + + Q + F + + G Sbjct: 326 DAKNPEAYLNRGRAHAASGNHLAAIQDYGQVIK---FQPKSALAYFNRGVAYSKVGDNAT 382 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A + + + Y G+ V +Q ++ + + ++ ++ Sbjct: 383 ALADYSKALQL---DPKYAAALYNRGL--------VQLNQGNSQDAIADFTASIQM--DT 429 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLAN 219 Y A + E I + Y RG + + + +A+ Sbjct: 430 KYAA-AYKNRGTAHLKAGNTEAAIADFTQAITFNAEDTLAYYNRGIAHSTAGQNEAAIAD 488 Query: 220 YSDA 223 YS Sbjct: 489 YSQV 492 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 61/187 (32%), Gaps = 36/187 (19%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGK 109 D +Y +Y + ++ L + N A F + A + AG Sbjct: 394 DPKYAAALYNRGLVQLNQGNSQDAIADFTASIQMDTKYA-AAYKNRGT-----AHLKAGN 447 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + IT E YY G++++ ++ + + S++++ Sbjct: 448 TEAAIADFTQAITFNAEDTL---AYYNRGIAHSTAGQN--------EAAIADYSQVLKLD 496 Query: 170 TN--SPYV-----------KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + Y + A + A E Y R +A+ +++ Sbjct: 497 PKFAAAYTNRGNLHAAQGDRDAALK-DYSQAIEANPENATA--YNNRALIHSALRQYEEA 553 Query: 217 LANYSDA 223 L++Y A Sbjct: 554 LSDYQQA 560 >gi|42522407|ref|NP_967787.1| adventurous gliding motility protein U [Bdellovibrio bacteriovorus HD100] gi|39574939|emb|CAE78780.1| adventurous gliding motility protein U [Bdellovibrio bacteriovorus HD100] Length = 1066 Score = 43.6 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 82/229 (35%), Gaps = 25/229 (10%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D D + + ++ + + K +Y+ + +R +P + ++ A + Sbjct: 194 DFPRDEKMSQALFFLGYNYFELGEVKKGADYYEKLTRGYPNSQFVGEAHFALAEYYFENE 253 Query: 109 KYQQAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 ++ A ++ ++ + Y ++ + + Y+ I Sbjct: 254 RWANAYKEY-SFLIKEKKHRLHT---FALYKGSWCLFRL--------GKVQQAMTYLEYI 301 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEV-EIGRYYLKRGEYVAAIPRFQLVL-ANYSDA 223 ++ + + V R +L + + +I +Y + G+ A F+ ++ NY + Sbjct: 302 IKA-GKNETGDQLASRMKVNRTRLEGEALRDIVVFYAEGGDPNKAADYFKNLVGNNY--S 358 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA-RYVETLVK 271 + + RL Y D +R+V L+ + P A Y +V+ Sbjct: 359 PY----LERLAYQYSDRGNKDASRDVFKLLISQNPTAPKAFEYQYQIVQ 403 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 24/61 (39%) Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 I Q + + +E A E R+ Y D+A I +++P +A Y L Sbjct: 572 IKAGQWYVEKFPSSEKAVEIKFRMGRLYYQSNHFDQATAHFRDIVKQHPNTKYAEYSANL 631 Query: 270 V 270 + Sbjct: 632 L 632 Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 14/73 (19%) Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 VE++ +S +F + GR Y + + A F+ ++ + + + Sbjct: 578 YVEKFPSSEKAVEIKFRM--------------GRLYYQSNHFDQATAHFRDIVKQHPNTK 623 Query: 225 HAEEAMARLVEAY 237 +AE + L++ Y Sbjct: 624 YAEYSANLLLDIY 636 Score = 35.5 bits (81), Expect = 9.3, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 5/66 (7%) Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 R Y K+ A+ ++ ++ E +A+ L Y L + + + + Sbjct: 177 AREYNKK-----AVQLYEWFQRDFPRDEKMSQALFFLGYNYFELGEVKKGADYYEKLTRG 231 Query: 257 YPQGYW 262 YP + Sbjct: 232 YPNSQF 237 >gi|282897473|ref|ZP_06305475.1| TPR repeat protein [Raphidiopsis brookii D9] gi|281198125|gb|EFA73019.1| TPR repeat protein [Raphidiopsis brookii D9] Length = 548 Score = 43.6 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 39/131 (29%), Gaps = 36/131 (27%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--------------MSAFVQ--- 104 +A ++ A E ++Q P + + +L + Sbjct: 371 NRAEARYLIGDYQGAIEDYSQVLSIHP--DLLDQPILVGDIGELFNIKCHDEVIYKNRAD 428 Query: 105 --YSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 Y G+Y++A + I N++Y YY G Y + + Sbjct: 429 HLYQLGEYEEAVENYNQAIAL-----NINYVDAYYQRGKIYFNR--------GIYEAAVD 475 Query: 161 YMSRIVERYTN 171 S +++ N Sbjct: 476 DFSMVIKTQPN 486 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 52/168 (30%), Gaps = 37/168 (22%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPF----AGVARKSLLMSAFVQYSAGKYQQAASL 116 Y +A+ K+ ++ + E ++ + + + + + Y G Y A S Sbjct: 262 YSQALQNNKKNSYYQ-EELRSELNLSHKYADNISNIDIHAYYKLGLAYYQLGDYDMAISN 320 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP--Y 174 + I N Y G+++ + R ++ S+ + Y Sbjct: 321 YNQVINANVNHSN---AYNKRGLAHYKS--------RNYHSAIEDFSQAISINPELAINY 369 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 A YL G+Y AI + VL+ + D Sbjct: 370 KNRAEAR------------------YL-IGDYQGAIEDYSQVLSIHPD 398 >gi|308064052|gb|ADO05939.1| paralysed flagella protein [Helicobacter pylori Sat464] Length = 803 Score = 43.6 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 188 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 247 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP ++ V Y V + + K ++Y RI+ Sbjct: 248 IKKSLLIEIGAKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 299 Query: 168 RYTNSPYVKGARFYVTV 184 Y NS Y A+ + + Sbjct: 300 EYKNSRYAPLAQMRLAI 316 Score = 42.8 bits (100), Expect = 0.057, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 32/99 (32%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + + TD +Y Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIEIGAKWIKNYPTDPSIPEVLYY 276 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 277 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 315 >gi|254670260|emb|CBA05515.1| conserved hypothetical protein [Neisseria meningitidis alpha153] Length = 238 Score = 43.6 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S V + +Y +A+ K FS A +A++S+ + + G Sbjct: 112 SAHTVETAQNLYNQALKHYKSGRFSAAAALLKGADGGD-GGSIAQRSMYLLLQSRARMGN 170 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168 + +G Y ++ +S + +G + +D+ +++ Sbjct: 171 CESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIAR---------ATWRSLIQA 221 Query: 169 YTNSP 173 Y +SP Sbjct: 222 YPSSP 226 >gi|21229432|ref|NP_635354.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1] gi|20908028|gb|AAM33026.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1] Length = 350 Score = 43.6 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 37/110 (33%), Gaps = 16/110 (14%) Query: 63 KAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + K + +A + F++ + L Y G+Y++A + + Sbjct: 202 RGKSSYKLGKYEEAVKEFDRCLESN----PKDADILRNKGSALYMLGRYEEAIEAFNKSL 257 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 P + + L G + + R + L+ + + ++R N Sbjct: 258 ELNPRDAD---AWNLKGSTLYMIGR--------PEEALRALDKALQRNPN 296 >gi|22298476|ref|NP_681723.1| putative transglycosylase [Thermosynechococcus elongatus BP-1] gi|22294656|dbj|BAC08485.1| tll0933 [Thermosynechococcus elongatus BP-1] Length = 704 Score = 43.6 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 66/226 (29%), Gaps = 40/226 (17%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 +Y + A + + FP + A + L A A Sbjct: 244 PTPLNLYRVGRGRQLSGERTGAIAAYQALIQRFPNSSEAALAQLRLAR---------LAK 294 Query: 115 SLGEEY------ITQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + E + E++ + Q R++ TK Q ++ Sbjct: 295 TAAERLPLLAKCLQLATENQAPAIAADAL----LEQYQAYREL----GNTKGAQQSQQQL 346 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 + Y S R QLA ++ ++ A + +L ++E Sbjct: 347 FKTYPQSSAAAE-------LRWQLAQGA-------AQKRQWSQAQQWVREILKFNPESEL 392 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 A A + R+ L+ ERYP Y+A +L++ Sbjct: 393 AARAAFWQGKWQGEAGQPQAQRQTWQLVTERYPHTYYAWRAASLLQ 438 >gi|258545518|ref|ZP_05705752.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] gi|258519218|gb|EEV88077.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] Length = 261 Score = 43.6 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 39/272 (14%), Positives = 85/272 (31%), Gaps = 41/272 (15%) Query: 18 QLYKFALTIF---FSIAVCFLVGWERQSSRDVYLDSVTDVRYQ-REVYEK----AVLFLK 69 ++ KF L + C G+ ++ D + +V + + Y+ +L+ Sbjct: 2 KMKKFPLLCAAATVLLGGCSTFGFGGSNNDDDNVPTVVKKKADYGQAYKDYVELGAQYLQ 61 Query: 70 EQNFSKAYEYFN-QCS-RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 + A P ++L + ++ I +PE Sbjct: 62 MGRYDLAEPKLQRAIEIDSHPPEAWNILAVL-----YEEKRDIASGNQVYQKLIHSHPE- 115 Query: 128 KNVDYVYYLVGMSYAQMIR-DVPYD---QRATKLMLQYMSRI-----------VERYTNS 172 YL+G + D Q M + ++R S Sbjct: 116 -------YLLGYTNYATFLCKFDRDSEMQTLLGQMRGRNAEFKAAAGIAEGNCMQRRGQS 168 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 + A Q + + + L++G+Y +A+ R+ V+ Y ++ E++ Sbjct: 169 GTAENAYKQALAANPQAEGALLPLAQISLQKGDYASAL-RYLRVVHTY--VGYSPESVKL 225 Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 +EA E+V +++ Y A+ Sbjct: 226 GIEAARKSGDTRMEEELVRVMRGNYKSTPEAK 257 >gi|114769353|ref|ZP_01446979.1| hypothetical protein OM2255_06465 [alpha proteobacterium HTCC2255] gi|114550270|gb|EAU53151.1| hypothetical protein OM2255_06465 [alpha proteobacterium HTCC2255] Length = 172 Score = 43.6 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 16/124 (12%), Positives = 44/124 (35%), Gaps = 14/124 (11%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + ++ + + + +F+ + E+ + + ++ M A V + KY + S ++ Sbjct: 55 LLKRGMNAMAQGDFTASVEHLTAAID---YTPMFAEAWNMRATVFFLMEKYALSVSDIQQ 111 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P +S MI + K L+ +++E + S + Sbjct: 112 TLKLNPRHFG--------ALSGLGMIFERS---GQPKQALEVYKKLLEVHPRSSNAITSV 160 Query: 180 FYVT 183 + Sbjct: 161 NRLI 164 >gi|84683982|ref|ZP_01011884.1| TPR domain protein [Maritimibacter alkaliphilus HTCC2654] gi|84667735|gb|EAQ14203.1| TPR domain protein [Rhodobacterales bacterium HTCC2654] Length = 578 Score = 43.6 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 32/228 (14%), Positives = 72/228 (31%), Gaps = 40/228 (17%) Query: 45 DVYLDSVTDVRYQREVYEKAV----LFLKEQNFSKA-YEYFNQCSRDFPFAGVARKSLLM 99 ++ + + + Y +A+ L+ + ++A E + +P +A + Sbjct: 313 ELAVQTYDQIAPDSRAYVQAMMGKASALRRSDQAEAGIETLTTLADRYP--DLAP-VHVA 369 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV-YYLVGMSYAQMIRDVPYDQRATKLM 158 + +A + + I+ YPE + Y+ G+ + R + Sbjct: 370 LGDAYRYEEAWPEAIAAYDRAISLYPEEVAAQWAVYFARGIVNERGGR--------WEDA 421 Query: 159 LQYMSRIVERYTNSP-------YV--------KGARFYVTVGRNQLAAKEVEIGR----Y 199 + + +E + P Y A + +Q E I Sbjct: 422 ERDFRKALELEPDQPSVLNYLGYSLVEKRENLDEALGMIEKAVDQ-RPNEGYIVDSLGWV 480 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 Y + G Y A+P+ + ++ + L + Y A+ EA Sbjct: 481 YYRLGRYDEAVPQMEKAVSLMPVDPVVND---HLGDVYWAVGRTREAE 525 >gi|113477029|ref|YP_723090.1| hypothetical protein Tery_3529 [Trichodesmium erythraeum IMS101] gi|110168077|gb|ABG52617.1| protein of unknown function DUF323 [Trichodesmium erythraeum IMS101] Length = 929 Score = 43.6 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 27/71 (38%), Gaps = 3/71 (4%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + ++ Y + + +++ +N+ A + Q R P VA + Y G+YQ Sbjct: 564 NPKFADGYYRRGLAYIQLENYGDAVDDLTQVIRLDPSHAVAFNYR---GYAYYKLGEYQW 620 Query: 113 AASLGEEYITQ 123 A I Sbjct: 621 AVDDYNRAINL 631 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 27/96 (28%), Gaps = 12/96 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGE 118 Y + + + + +A F P FA R+ L Y A Sbjct: 538 YLRGIDKFNLEKYEEAIIDFGYVISLNPKFADGYYRRGL-----AYIQLENYGDAVDDLT 592 Query: 119 EYITQYPESKNV----DYVYYLVGMSYAQMIRDVPY 150 + I P Y YY +G Y + D Sbjct: 593 QVIRLDPSHAVAFNYRGYAYYKLG-EYQWAVDDYNR 627 >gi|261252512|ref|ZP_05945085.1| TPR repeat-containing protein [Vibrio orientalis CIP 102891] gi|260935903|gb|EEX91892.1| TPR repeat-containing protein [Vibrio orientalis CIP 102891] Length = 256 Score = 43.6 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 43/130 (33%), Gaps = 27/130 (20%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A + +++ YP+S +Y +G Y +D K ++ + + Sbjct: 152 KKRDYTGAIAAFQQFQKDYPDSTFTPNSHYWLGQLYFAKKQD--------KDAVKSFAAV 203 Query: 166 VERYTNSPYVKGARFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 V Y +S A + RN A + A +Q V+ Y + Sbjct: 204 V-AYKDSNKRADALVKLGDIAQRNNNAEQ----------------AKKYYQQVVDEYPTS 246 Query: 224 EHAEEAMARL 233 A A RL Sbjct: 247 ASANLAKERL 256 Score = 39.7 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 45/119 (37%), Gaps = 15/119 (12%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + + Y +S + + +++ G+ Y Sbjct: 143 YQNSVDLILKKRDYTGAIAAFQQFQKDYPDSTFTPNSHYWL--------------GQLYF 188 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + A+ F V+A Y D+ +A+ +L + ++A++ + + YP Sbjct: 189 AKKQDKDAVKSFAAVVA-YKDSNKRADALVKLGDIAQRNNNAEQAKKYYQQVVDEYPTS 246 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 46/133 (34%), Gaps = 22/133 (16%) Query: 57 QREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-SAGKYQ--- 111 ++ Y+ +V LK+++++ A F Q +D+P + S + + Sbjct: 139 EQTAYQNSVDLILKKRDYTGAIAAFQQFQKDYPDSTFTPNSHYWLGQLYFAKKQDKDAVK 198 Query: 112 --QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 A ++ +K D + + D+ + +Y ++V+ Y Sbjct: 199 SFAAVVAYKD------SNKRAD------ALV---KLGDIAQRNNNAEQAKKYYQQVVDEY 243 Query: 170 TNSPYVKGARFYV 182 S A+ + Sbjct: 244 PTSASANLAKERL 256 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 3/71 (4%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 LK+ +Y AI FQ +Y D+ + L + Y A +A + + + Y Sbjct: 151 LKKRDYTGAIAAFQQFQKDYPDSTFTPNSHYWLGQLYFAKKQDKDAVKSFAAVVA-YKDS 209 Query: 261 YWARYVETLVK 271 + + LVK Sbjct: 210 N--KRADALVK 218 >gi|56461214|ref|YP_156495.1| TPR repeat-containing protein [Idiomarina loihiensis L2TR] gi|56180224|gb|AAV82946.1| TPR repeats containing protein [Idiomarina loihiensis L2TR] Length = 417 Score = 43.6 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 1/77 (1%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 + V + + + +Y A L L + F +A + +Q + K+ ++ A Sbjct: 99 EKVVKESPIPESLEKSTLYSLAQLALSDGQFQRAISFLDQWEGLAEEGEMG-KAWVLKAQ 157 Query: 103 VQYSAGKYQQAASLGEE 119 Y A KYQ+A SL ++ Sbjct: 158 AYYQADKYQEALSLIDK 174 >gi|125975162|ref|YP_001039072.1| peptidase S41 [Clostridium thermocellum ATCC 27405] gi|256003175|ref|ZP_05428167.1| peptidase S41 [Clostridium thermocellum DSM 2360] gi|281418417|ref|ZP_06249436.1| peptidase S41 [Clostridium thermocellum JW20] gi|125715387|gb|ABN53879.1| peptidase S41 [Clostridium thermocellum ATCC 27405] gi|255992866|gb|EEU02956.1| peptidase S41 [Clostridium thermocellum DSM 2360] gi|281407501|gb|EFB37760.1| peptidase S41 [Clostridium thermocellum JW20] gi|316939327|gb|ADU73361.1| peptidase S41 [Clostridium thermocellum DSM 1313] Length = 745 Score = 43.6 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 54/179 (30%), Gaps = 32/179 (17%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K L + VC ++Y + A + A + Sbjct: 1 MKKRLLLFILVLGVCLFTSCGNFVKTNIY-------------FSAAESAFDSGKYEDAIK 47 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 Y+++ +A ++ GKY++A ++ I +K++ Y G Sbjct: 48 YYDKVIEADSGNAMAYLGKGLALDA---LGKYEEALEFFDKAIEI---NKDLAKAYNAKG 101 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEI 196 + A + R + L+ + E NS Y G N L E I Sbjct: 102 TTLASLER--------YEESLENFKKAAELKPKNSAYQNDV----AYGLNNLGRFEEAI 148 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 66/205 (32%), Gaps = 53/205 (25%) Query: 49 DSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 D + VY+ K ++L E N+ +A + F++ P S + + Y Sbjct: 322 DEFLAIAEDASVYDMKGQIYLHEYNYPEAIKLFDKAIEVDP--SY-EDSYINKIYCLYLQ 378 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 Y++ + T +P S ++ + Y +G Y+ M+ + ++Y+ + E Sbjct: 379 KNYKECIEFATKVQTIFPNSADIPW--Y-IGDCYSIMME--------PEKAIEYLKKAHE 427 Query: 168 RYTN---------------------SPYVKGAR------FYVTVGRNQLAAKEVEIGR-- 198 S Y + A V R +L +++ Sbjct: 428 LNPKDVGILTSIAWEYYSLEDYAKASEYAEKAAEISADDESVKYIREKLENQKLPEAEQI 487 Query: 199 ---------YYLKRGEYVAAIPRFQ 214 YY K + A F+ Sbjct: 488 VEFVKNNYLYYDKIANFEALANEFK 512 >gi|209965093|ref|YP_002298008.1| hypothetical protein RC1_1798 [Rhodospirillum centenum SW] gi|209958559|gb|ACI99195.1| conserved hypothetical protein [Rhodospirillum centenum SW] Length = 318 Score = 43.6 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 48/134 (35%), Gaps = 12/134 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-QQAAS 115 +E Y+ A ++ +++ A F Q P +A + Y KY + A + Sbjct: 193 AQEQYDYAFNLTRQGDYAGAERAFTQFLAQHPTHQLAPNAQYWLGETLYVRNKYKESARA 252 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 E Y +YP+S + M+ + + + + ++ + ++P Sbjct: 253 FAEGY-KKYPKSNKAPDSLLKLAMALGNLNQR--------EDACLALDQLRTDFKDAP-- 301 Query: 176 KGARFYVTVGRNQL 189 + RN+L Sbjct: 302 GTIQRRAEQERNRL 315 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 11/108 (10%), Positives = 36/108 (33%), Gaps = 14/108 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q + ++ + ++ A++++ + + R +Y + Sbjct: 206 QGDYAGAERAFTQFLAQHPTHQLAPNAQYWLGET--------LYV------RNKYKESAR 251 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F Y + A +++ +L A L ++A + ++ + Sbjct: 252 AFAEGYKKYPKSNKAPDSLLKLAMALGNLNQREDACLALDQLRTDFKD 299 >gi|159043334|ref|YP_001532128.1| tetratricopeptide repeat-containing protein [Dinoroseobacter shibae DFL 12] gi|157911094|gb|ABV92527.1| tetratricopeptide TPR_2 repeat protein [Dinoroseobacter shibae DFL 12] Length = 188 Score = 43.6 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 9/81 (11%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG--VARKSLLMSAFVQYS 106 S + + ++ ++ QN+ A E+ + P FA AR A + Sbjct: 61 SQSGSPAADLLLDRGRDAMEAQNYDAAIEHLTALTDHAPDFAEGWYAR------ATAYFL 114 Query: 107 AGKYQQAASLGEEYITQYPES 127 A Y A S +T P+ Sbjct: 115 ADLYGPALSDLARALTLNPQH 135 >gi|20091650|ref|NP_617725.1| hypothetical protein MA2826 [Methanosarcina acetivorans C2A] gi|19916818|gb|AAM06205.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 1121 Score = 43.6 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 38/112 (33%), Gaps = 14/112 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + + +F A ++Q P A F +YQ+A + ++ Sbjct: 849 MYRQGKALEAKGDFEAAIACYDQILTLDPKNIDAIN---NKGFAYAKMERYQEAIASYDK 905 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 I P + +Y G + + ++ ++ ++V+ + Sbjct: 906 AIEYAPNNAA---AWYFKGCANFAISSNI--------AAVECFDKVVQLKPD 946 Score = 35.9 bits (82), Expect = 6.5, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 12/97 (12%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGK 109 D Y + + K K + A + F++ ++ A + AF G Sbjct: 466 DSGYAKVWHRKGYDSSKLGQYKDAAKSFDKAVNLDENYTLAWYGK------AFALSKTGD 519 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 Y++A + E+ + P+S + +Y G+ Q+ R Sbjct: 520 YEEALACYEKVLAAAPDSAEI---WYNKGLLLDQLER 553 >gi|332674077|gb|AEE70894.1| paralysed flagella protein [Helicobacter pylori 83] Length = 803 Score = 43.6 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 188 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 247 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP ++ V Y V + + K ++Y RI+ Sbjct: 248 IKKSLLIDIGTKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 299 Query: 168 RYTNSPYVKGARFYVTV 184 Y +S Y A+ + + Sbjct: 300 EYKDSRYAPLAQMRLAI 316 Score = 42.0 bits (98), Expect = 0.079, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPSIPEVLYY 276 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 277 VAKALDENNNYKQAMRYYKRILLEYKDSRYAPLAQMRLA 315 >gi|325119602|emb|CBZ55155.1| Serine/threonine protein phosphatase 5, related [Neospora caninum Liverpool] Length = 598 Score = 43.6 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 50/180 (27%), Gaps = 41/180 (22%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVAR-----KSLL-MSAFVQYS 106 V ++ + F K + F +A E + A+ + LL AF Q + Sbjct: 108 VAEAEKLKAEGNEFFKTRLFHQAVEKYTAAIDLICDNTMTAQTKQILQVLLCNRAFCQIN 167 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y A E I P YY G +Y + R K + R++ Sbjct: 168 LENYGSAVVDAERVIQLNPLFAK---AYYRRGCAYCCLSR--------YKKAQKDFERVI 216 Query: 167 ERY--TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP-----RFQLVLAN 219 + + + Q+ + + AAI R + Sbjct: 217 ALSTTPD----PSVVSRLQECKKQI------------RLEAFAAAIETEKTMRASEAVRK 260 >gi|154151489|ref|YP_001405107.1| putative PAS/PAC sensor protein [Candidatus Methanoregula boonei 6A8] gi|154000041|gb|ABS56464.1| putative PAS/PAC sensor protein [Methanoregula boonei 6A8] Length = 461 Score = 43.6 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 54/147 (36%), Gaps = 19/147 (12%) Query: 61 YEKAVLFL-KEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 Y++ V+ + +N+ A E F + P + + + A G Y +A Sbjct: 309 YKEGVVLYARNRNYRGAIEAFERAIEIDPKLP-HVWNDRGICIRA-----LGDYDEALKS 362 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + P++ + Y +G + + + + + R + ++ +V N+ Sbjct: 363 FLRAVELSPQNPEI---LYELGET-LEQMGVMQMNNRYIEAAVETFKMVVNSLPNNM--- 415 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKR 203 + ++ + +L E ++Y R Sbjct: 416 DSWNHIGICLKELGKPEES--KFYFDR 440 >gi|153802361|ref|ZP_01956947.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|124122080|gb|EAY40823.1| conserved hypothetical protein [Vibrio cholerae MZO-3] Length = 634 Score = 43.6 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 F+L + F +++ W S + D + E Y +A ++ + A Y+ Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379 Query: 82 QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + ++ + A AG+ Q+A L E+ + Q P ++ Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433 >gi|332290875|ref|YP_004429484.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter diaphorus 4H-3-7-5] gi|332168961|gb|AEE18216.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter diaphorus 4H-3-7-5] Length = 462 Score = 43.2 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 79/242 (32%), Gaps = 48/242 (19%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 KA LF+ E F KA + P + + A + +++A L E+ I Sbjct: 69 KAELFIFENKFDKADAILTELHLLDP---HNEEVYIQKANIYSKQDDHEKAIHLLEQAID 125 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPY-----------DQRAT---------------K 156 + + VY L+GM Y + DQ + + Sbjct: 126 L---TDDPADVYSLIGMEYLFLEDFQNAKLNFMKCLEVDDQDYSALYNVIYCFDFLEEHE 182 Query: 157 LMLQYMSRIVERYTNSPYVK-GARFYVTVGRN---QLAAKEVEIG---RY---YLKRGEY 206 + Y++ ++ +N L++ E I R+ YL++G+ Sbjct: 183 GAIDYLNMFLDNNPYCEVAWHQIGKQYFGLKNYEKALSSYEFAIISDDRFVGAYLEKGKV 242 Query: 207 VAAIPRFQLVLANYSDAEHAEE----AMARLVEAYVALALMDEAREVVSLIQERYP--QG 260 + + R+ L NY E+ A+ R+ + Y L + A + P Sbjct: 243 LEKLGRYNEALENYQITLELEDPTSFALLRMGKCYDKLGSDELAIKHFERCVHEDPLLDN 302 Query: 261 YW 262 W Sbjct: 303 GW 304 >gi|186684910|ref|YP_001868106.1| hypothetical protein Npun_R4816 [Nostoc punctiforme PCC 73102] gi|186467362|gb|ACC83163.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102] Length = 226 Score = 43.2 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 42/126 (33%), Gaps = 11/126 (8%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 Y+ F ++ F V Q+ L + +++ E+ + ++S Sbjct: 1 MYKPTSFVFSVVLLGCFAFTVPSVAQA---QVLVAQAKNPQLKQLLEEGRRLVDSGDYSG 57 Query: 76 AYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A + Q + P + + + ++ G YQ A + I P + + Y Sbjct: 58 AIAVYQQAASLDP-----KNAKIHSGIGYLYAQQGNYQAALTSYRRAIAINPNNSDFYYA 112 Query: 134 Y-YLVG 138 Y+ Sbjct: 113 VGYIKA 118 >gi|116620339|ref|YP_822495.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116223501|gb|ABJ82210.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 761 Score = 43.2 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 27/220 (12%), Positives = 61/220 (27%), Gaps = 35/220 (15%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 L+ + RE+ L+ ++ A E + +P + + L+ + Sbjct: 534 EELNRHPEADSVREL--LGETSLESGHYDVAIEQAGRLLSKYPDSA---RLHLLVGKAYF 588 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 G A + P + ++ + Q ++ + Sbjct: 589 RKGDLAGATRAYQRASVLRPSDPAA-----VNALASTYAV------QGQASQAMEAYRHV 637 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 ++ + N LA I G A+ V+ + + Sbjct: 638 LKLNPDD----------WGAMNNLA---FLIAE---NNGSLDEALSLSSRVIRKFPNVPD 681 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 + + + YV + D A + + + PQ RY Sbjct: 682 FNDTLGWI---YVKKGMSDSAIPMFRKLARQDPQNATYRY 718 >gi|195146812|ref|XP_002014378.1| GL19161 [Drosophila persimilis] gi|194106331|gb|EDW28374.1| GL19161 [Drosophila persimilis] Length = 1139 Score = 43.2 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 17/162 (10%), Positives = 45/162 (27%), Gaps = 47/162 (29%) Query: 109 KYQQAASLGEEYITQYP-----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 +Y +A S ++Y+ + + Y +G++Y ++ R K ++ Sbjct: 119 EYSEALSAYQKYLRFNQNNYWTNHEFI----YGIGIAYFKL--------RCFKWAIKSFQ 166 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAK--------------------EVEI----GRY 199 ++ N + E+ + Sbjct: 167 ELLYLNPNFTCANDVHLRLGFMLKHCGEYHIALKHLQLALLYTNPSTYSELHVKFQIAHL 226 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 Y + ++ AA ++ +L ++ + Y L Sbjct: 227 YEVQNKHKAAKKAYEFLLNE------KNISLKLKADVYRQLG 262 >gi|325128502|gb|EGC51380.1| putative lipoprotein [Neisseria meningitidis N1568] Length = 238 Score = 43.2 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S V + +Y +A+ K FS A +A++S+ + + G Sbjct: 112 SAHTVETAQNLYNQALKHYKSGRFSAAASLLKGADGGD-GGSIAQRSMYLLLQSRARMGN 170 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168 + +G Y ++ +S + +G + +D+ +++ Sbjct: 171 CESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIAR---------ATWRSLIQA 221 Query: 169 YTNSP 173 Y +SP Sbjct: 222 YPSSP 226 >gi|301165622|emb|CBW25193.1| putative exported protein [Bacteriovorax marinus SJ] Length = 963 Score = 43.2 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 67/192 (34%), Gaps = 28/192 (14%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A ++ + + +A + R+ F K + A+ Y GK + A L E Sbjct: 173 AEIYFNQGQYKQAIPLYENAFRNKKFRDKWYTKDSVNLAWSYYRVGKTKSAIRLMREAYK 232 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 +S N Y M + D L Y YT+S V A + Sbjct: 233 L-SKSPN-----------YVDMSFSIERD-------LAYF------YTDSGRVNEAVQFY 267 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE-EAMARLVEAYVALA 241 +A+ +++ Y + RG+Y A + L NY +E + E +L+ Y Sbjct: 268 KSIGKNIASNLLKVSTYLMNRGKYSPAEKTLKQAL-NYKVSEQEDIEINIKLLSLYERFG 326 Query: 242 LMDEAREVVSLI 253 ++V + Sbjct: 327 KYHNHQKVAKTL 338 >gi|224369488|ref|YP_002603652.1| AmiC [Desulfobacterium autotrophicum HRM2] gi|223692205|gb|ACN15488.1| AmiC [Desulfobacterium autotrophicum HRM2] Length = 568 Score = 43.2 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 7/76 (9%) Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL-------ALMDEAREVVSLIQE 255 R +V I +Q V +++ ++ A M R + Y+ L EA ++++ IQ Sbjct: 54 RKAWVNCIASYQRVYSDHPESPWAAAGMYRSAQLYLDLSQRSSNKNDKTEAVDLLNRIQG 113 Query: 256 RYPQGYWARYVETLVK 271 YP+ + L+K Sbjct: 114 HYPKSAYKDKAVHLLK 129 Score = 39.3 bits (91), Expect = 0.64, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 1/80 (1%) Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + + + +PES Y Y + + T + ++RI Y S Sbjct: 61 IASYQRVYSDHPESPWAAAGMYRSAQLYLDLSQRSSNKNDKT-EAVDLLNRIQGHYPKSA 119 Query: 174 YVKGARFYVTVGRNQLAAKE 193 Y A + + Q + KE Sbjct: 120 YKDKAVHLLKLIAVQESKKE 139 >gi|158337770|ref|YP_001518946.1| hypothetical protein AM1_4653 [Acaryochloris marina MBIC11017] gi|158308011|gb|ABW29628.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 826 Score = 43.2 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 7/66 (10%), Positives = 20/66 (30%), Gaps = 11/66 (16%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 A + A + ++ + P +Y G+ + R + + + Sbjct: 133 KAKDFDAALAAYDKVLAFKPNH---AQAWYQRGLVLFNLQRS--------EDAIASFDQA 181 Query: 166 VERYTN 171 +E + Sbjct: 182 LEHQPD 187 >gi|150015089|ref|YP_001307343.1| TPR repeat-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149901554|gb|ABR32387.1| Tetratricopeptide TPR_2 repeat protein [Clostridium beijerinckii NCIMB 8052] Length = 421 Score = 43.2 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 40/123 (32%), Gaps = 9/123 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE + E +S A + ++ + L A A EEY Sbjct: 306 YENGLKSFNENKYSDAKVFLDKAYAYCEGNSLKEHILFYRASSSSKLSDNSAAVKQYEEY 365 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +QYP V+ Y + + + + +D QY S ++ Y +S Y Sbjct: 366 YSQYPNGVYVEEALYNLALLNSSINKD---------KSKQYASILINNYPDSMYANNNIK 416 Query: 181 YVT 183 + Sbjct: 417 NII 419 Score = 42.8 bits (100), Expect = 0.057, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 53/132 (40%), Gaps = 20/132 (15%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR-----NQLAAKEVEI 196 + D+ DQ ++ + ++ + + Y A+ ++ N L + Sbjct: 290 YKQAVDLIKDQGVSR----FYENGLKSFNENKYS-DAKVFLDKAYAYCEGNSLKEHIL-- 342 Query: 197 GRYY-----LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 +Y K + AA+ +++ + Y + + EEA+ L ++ D++++ S Sbjct: 343 --FYRASSSSKLSDNSAAVKQYEEYYSQYPNGVYVEEALYNLALLNSSIN-KDKSKQYAS 399 Query: 252 LIQERYPQGYWA 263 ++ YP +A Sbjct: 400 ILINNYPDSMYA 411 >gi|317182523|dbj|BAJ60307.1| paralysed flagella protein [Helicobacter pylori F57] Length = 804 Score = 43.2 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 189 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 248 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP ++ V Y V + + K + Y RI+ Sbjct: 249 IKKSLLIDIGTKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMHYYKRILL 300 Query: 168 RYTNSPYVKGARFYVTV 184 Y +S Y A+ + + Sbjct: 301 EYKDSRYAPLAQMRLAI 317 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 218 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPSIPEVLYY 277 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 278 VAKALDENNNYKQAMHYYKRILLEYKDSRYAPLAQMRLA 316 >gi|304387176|ref|ZP_07369419.1| probable periplasmic protein [Neisseria meningitidis ATCC 13091] gi|304338743|gb|EFM04854.1| probable periplasmic protein [Neisseria meningitidis ATCC 13091] Length = 238 Score = 43.2 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 11/125 (8%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S V + +Y +A+ K FS A +A++S+ + + G Sbjct: 112 SAHTVETAQNLYNQALKHYKSGRFSAAASLLKGADGGD-GGSIAQRSMYLLLQSRARMGN 170 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168 + +G Y ++ +S + +G + +D+ +++ Sbjct: 171 CESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIAR---------ATWRSLIQA 221 Query: 169 YTNSP 173 Y +SP Sbjct: 222 YPSSP 226 >gi|193580212|ref|XP_001944071.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Acyrthosiphon pisum] Length = 1173 Score = 43.2 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 63/155 (40%), Gaps = 24/155 (15%) Query: 118 EEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPY--DQ--RATKLMLQYMSRIVERYTN 171 +++ P + N Y +G + Q + DQ R L LQ+ +++++ Sbjct: 585 KKFERVLKNPSTLNDPYSLIALGNVWLQTLHQPTRNKDQEKRHQDLALQFYTKVLKYDPR 644 Query: 172 SPYVKG------ARFY-VTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQ 214 + + A + + R+ + +E + I Y+++ +Y++AI ++ Sbjct: 645 NIWAANGIGCVLAYKHCINEARDIFSQVREATSDFCDVWLNIAHIYVEQKQYISAIQMYE 704 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 + + ++ E + L AY ++ EA+ V Sbjct: 705 SCIKKFFKHDNV-EVLQYLGRAYFRAGMLKEAKRV 738 >gi|118579739|ref|YP_900989.1| lytic transglycosylase catalytic subunit [Pelobacter propionicus DSM 2379] gi|118502449|gb|ABK98931.1| Lytic transglycosylase, catalytic [Pelobacter propionicus DSM 2379] Length = 721 Score = 43.2 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 35/83 (42%), Gaps = 6/83 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS---LLMSAFVQYSAGKYQQAASLG 117 Y +A K + + +A +++P + + R+S L S AG + A L Sbjct: 122 YYQAEALFKLKRYPEAAAKAVAIPKEYPVSLLVRRSLKLQLDSVVA---AGDFAAALKLS 178 Query: 118 EEYITQYPESKNVDYVYYLVGMS 140 + ++ +YP + +L G+ Sbjct: 179 QAFVEKYPSGADSVDALFLSGLC 201 >gi|229527850|ref|ZP_04417241.1| TPR domain protein in aerotolerance operon [Vibrio cholerae 12129(1)] gi|229334212|gb|EEN99697.1| TPR domain protein in aerotolerance operon [Vibrio cholerae 12129(1)] Length = 620 Score = 43.2 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 F+L + F +++ W S + D + E Y +A ++ + A Y+ Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379 Query: 82 QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + ++ + A AG+ Q+A L E+ + Q P ++ Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433 >gi|82701510|ref|YP_411076.1| tetratricopeptide TPR_4 [Nitrosospira multiformis ATCC 25196] gi|82409575|gb|ABB73684.1| Tetratricopeptide TPR_4 [Nitrosospira multiformis ATCC 25196] Length = 929 Score = 43.2 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 86/224 (38%), Gaps = 32/224 (14%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDF 87 +A L E + + D+ + +V+ +++ +++ ++F+KA EYF S Sbjct: 345 LLASALLKNGETKRAIDILTPPLKNVKEDPQLFALAGEAYMQAKDFAKATEYFEMASDIA 404 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 P + + +L M + G+ +A S E P+S L+ M++ ++ Sbjct: 405 PRSAMLHTALSM---SRLGQGENARAISELETATKLDPKSPRAGV---LLVMTHLRL--- 455 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA------AKEVEIGRYYL 201 + L + + + ++P ++ + V +G+N +A K + I Y Sbjct: 456 -----KEFDKALAAVKALEKENPDNPLIQNLKGGVYLGKNDIANARASFEKALAIQPNYF 510 Query: 202 KR-----------GEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 + AA RF+ +L A A+A L Sbjct: 511 PTIANLARLDIQDKKPDAARKRFEAILEKDKKNIQAMVALAGLA 554 >gi|73544347|ref|XP_848068.1| intraflagellar transport protein IFT88 [Leishmania major strain Friedlin] gi|321438422|emb|CBZ12177.1| putative intraflagellar transport protein IFT88 [Leishmania major strain Friedlin] Length = 811 Score = 43.2 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 63/219 (28%), Gaps = 48/219 (21%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-- 110 + +Y + K + +A F + ++L+ S+ V Y Sbjct: 507 EADNVEAIYNLGLAAKKLGLYEEAVRMFKRV-----------QALVDSSEVLYQIADLSD 555 Query: 111 ----QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 A I + P N +G YA+ DV Y Sbjct: 556 LVGDPAALEWFNRLIGRVPTDPN---ALARIGSLYARDSDDV--------QAFHYYLEAY 604 Query: 167 ERY--------------TNSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 Y + A + + Q ++ + + +RG+YV A Sbjct: 605 RYYQVNMDVISWLGAYFVKNEVYDKAVQFFERASHIQPQEVKWQLMVASCHRRRGDYVQA 664 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 ++ V Y D E + LV+ L +EA E Sbjct: 665 KRLYEQVHRRYPD---NIECLNYLVQLCKDAGLNEEANE 700 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 69/208 (33%), Gaps = 43/208 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFN---QCSR-----DFPFAGVARKSLLMSAFV-------QYS 106 E A+L L+ +++ A E + R + +A + + + QY Sbjct: 144 ESAMLALQ-KDYGAALEKAKDAGKLERSLCKKREQYG-LAEQINVDLTYAVHFNLAVQYQ 201 Query: 107 AGK-YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + Y +A + I V + + ++ Q+ L ++ ++ Sbjct: 202 NHQLYTEALNTYNLIIRN---------VQFPQAGRLRVNMGNIYLAQQNYLLAIKMYRKV 252 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 ++ G F + RN I ++K G+Y A ++ V+ D Sbjct: 253 LDETP----AAGKEFRYHLCRN--------IANAFVKLGQYRDAANSYETVVEGNGDVNA 300 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLI 253 L+ Y AL ++ + + + Sbjct: 301 T----FNLILCYYALGETEKMKRTFTRL 324 >gi|320162434|ref|YP_004175659.1| hypothetical protein ANT_30330 [Anaerolinea thermophila UNI-1] gi|319996288|dbj|BAJ65059.1| hypothetical protein ANT_30330 [Anaerolinea thermophila UNI-1] Length = 778 Score = 43.2 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 67/191 (35%), Gaps = 21/191 (10%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++ + +Q++ KA +Y+ Q + P + +A S + G+Y++A Sbjct: 9 QQAMNQGHSAAWDQDWVKAAQYYAQALDEMPDSPLALSS---LGLAYFELGEYERALECY 65 Query: 118 EEYITQYPESKNVDY-----VYYLVG---------MSYAQMIRDVPYDQRATKLMLQYMS 163 + P V Y +Y +G + A++ +A + + +S Sbjct: 66 QRASKIAPTDP-VPYEKLTRIYERMGKLKEASEVCLQAAELHLRARDVDKAIEDWVHVLS 124 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEV-EIGRYYLKRGEYVAAIPRFQLVLANYSD 222 E + + GR A E I + + G+ A+ + L + Sbjct: 125 LFPEHLPTRQRLAAVYERM--GRKMEAINEYVAIASLFQRTGDMTRALKSVEYALRLMPE 182 Query: 223 AEHAEEAMARL 233 ++ A A+ L Sbjct: 183 SQEARFALHML 193 >gi|255693876|ref|ZP_05417551.1| aerotolerance-related exported protein [Bacteroides finegoldii DSM 17565] gi|260620305|gb|EEX43176.1| aerotolerance-related exported protein [Bacteroides finegoldii DSM 17565] Length = 278 Score = 43.2 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 15/122 (12%), Positives = 38/122 (31%), Gaps = 14/122 (11%) Query: 19 LYKFALTIFFSIAV-CFLVGWERQSSR-----DVYLDSVTDVRYQREVYE----KAVLFL 68 + K I I++ CF S+ D + T + + + Sbjct: 1 MKKILFFILTLISITCFGQDSLNVDSKQVNEGDSIHAASTTMFSNNTLANVTKTEGDSAY 60 Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 +++++ A + + ++ A Y G+ +A E + P + Sbjct: 61 IKEDYTAAIQIYEALLKN---GEAAE-VYYNLGNSYYKIGEIAKAVLNYERALLLQPGNS 116 Query: 129 NV 130 ++ Sbjct: 117 DI 118 >gi|156548833|ref|XP_001605529.1| PREDICTED: hypothetical protein [Nasonia vitripennis] Length = 558 Score = 43.2 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 82/205 (40%), Gaps = 22/205 (10%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 FL ++++ A P + + S L A+ + G Y++AA + E + + Sbjct: 31 EEFLSRRDYTGALTLLEFNETANPASS-NKDSRLWIAYCSFHLGDYRKAADIYEV-LRKS 88 Query: 125 PESKNVD----YV---YYLVGM--SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + K+ YV Y+ +GM +++ D P Q T+L+L ++ ++ Sbjct: 89 ADGKDAPELGTYVACCYFYLGMYPESQKILADAPDSQLKTRLLLHLAYKLSDK------- 141 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 Y R+ +A ++ + + R Y AI ++ VL + + Sbjct: 142 TQLEEYEEKLRD-IAEDQLCLASVHYLRAHYQEAIDIYKKVLLENREYLALN---VYVAL 197 Query: 236 AYVALALMDEAREVVSLIQERYPQG 260 Y L D A++V+ + ++YP Sbjct: 198 CYYKLDYYDVAQDVLQVYLQKYPDS 222 >gi|91792754|ref|YP_562405.1| tetratricopeptide TPR_2 [Shewanella denitrificans OS217] gi|91714756|gb|ABE54682.1| Tetratricopeptide TPR_2 [Shewanella denitrificans OS217] Length = 261 Score = 43.2 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 58/149 (38%), Gaps = 9/149 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 S+ V +S+T + YE+AV LKE+ + A F + + +P + A + Sbjct: 120 NTASNVPVVAESMTSSLDETGSYERAVNLVLKERQYDAAIPAFREFIKQYPDSAYAPNAN 179 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + Y+ Y+ A +++Y +S +GM + + Sbjct: 180 YWLGQLLYNKSDYESAKQAFSTVVSKYADSSKRADSLVKLGMIAEKSNDNNG-------- 231 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGR 186 +++++ Y NS + A+ ++ + Sbjct: 232 ARALYNKVLKEYANSASARLAQQQLSALK 260 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 LK +Y AAIP F+ + Y D+ +A A L + + + A++ S + +Y Sbjct: 150 LKERQYDAAIPAFREFIKQYPDSAYAPNANYWLGQLLYNKSDYESAKQAFSTVVSKYADS 209 Query: 261 YWARYVETLVK 271 + ++LVK Sbjct: 210 S--KRADSLVK 218 >gi|146276616|ref|YP_001166775.1| hypothetical protein Rsph17025_0564 [Rhodobacter sphaeroides ATCC 17025] gi|145554857|gb|ABP69470.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17025] Length = 274 Score = 43.2 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 10/126 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ-QAASLGEE 119 +++A L + +F A + F + + + ++ + G+ A + E Sbjct: 155 FDRAQEVLGQGDFRSAADLFKAFAETYTGGQLTYEAHYLRGEALRQLGETANAARAYLES 214 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P+ +G + D R T ++ + R+ SP A Sbjct: 215 FSGD-PDGPRAPEALLKLGRALG--------DLRQTPEACVTLAEVGTRFPGSPSAAEAA 265 Query: 180 FYVTVG 185 + Sbjct: 266 TAMQGL 271 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 30/113 (26%), Gaps = 20/113 (17%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q + E YT A + QL Sbjct: 164 QGDFRSAADLFKAFAETYTGGQLTYEAHYLRGEALRQLGE-----------------TAN 206 Query: 212 RFQLVLANY---SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + L ++ D A EA+ +L A L EA ++ + R+P Sbjct: 207 AARAYLESFSGDPDGPRAPEALLKLGRALGDLRQTPEACVTLAEVGTRFPGSP 259 >gi|237746995|ref|ZP_04577475.1| N-acetylglucosaminyl transferase [Oxalobacter formigenes HOxBLS] gi|229378346|gb|EEO28437.1| N-acetylglucosaminyl transferase [Oxalobacter formigenes HOxBLS] Length = 391 Score = 43.2 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 5/71 (7%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 D + R Q + YE FLK +A E F + + P++ AR++LL Sbjct: 100 PDLPPEQRMQAQ-YELGQDFLKAGLLDRAEEVFQELTET-PYSIQARRALLEI---FQRE 154 Query: 108 GKYQQAASLGE 118 +++QA + Sbjct: 155 KEWEQAIDAAK 165 >gi|218437704|ref|YP_002376033.1| hypothetical protein PCC7424_0709 [Cyanothece sp. PCC 7424] gi|218170432|gb|ACK69165.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424] Length = 864 Score = 43.2 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 57/154 (37%), Gaps = 33/154 (21%) Query: 105 YSAGKYQQAASLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + A E+Y +T P + ++ YY +G+ Y Q QR + Q Sbjct: 266 HQARNLSITQGAIEKYREALTWNPYNPDI---YYELGVIYYQ--------QRELEEASQL 314 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + + +E + + + +G Y ++ ++ AI ++ + + Sbjct: 315 LKKAIE--------------LDFLK---SQYHYLLGIIYFEQEQWEEAINVYKRAIEAFP 357 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + +E + L L+D+ + + ++++ Sbjct: 358 --KQDKEYLKIYSMLIRILGLIDQREKAIKVVEQ 389 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 34/98 (34%), Gaps = 14/98 (14%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A E + + P+ + Y + ++A+ L ++ I + Y Sbjct: 275 QGAIEKYREALTWNPYNP---DIYYELGVIYYQQRELEEASQLLKKAIEL--DFLKSQY- 328 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 +YL+G+ Y + Q + + R +E + Sbjct: 329 HYLLGIIYFE--------QEQWEEAINVYKRAIEAFPK 358 >gi|110679116|ref|YP_682123.1| TPR domain-containing protein [Roseobacter denitrificans OCh 114] gi|109455232|gb|ABG31437.1| TPR-domain containing protein [Roseobacter denitrificans OCh 114] Length = 196 Score = 43.2 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 48/126 (38%), Gaps = 18/126 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117 + ++ L++++ ++A E+ + + P FA ++ Y AG Y A Sbjct: 79 LLKRGREALEDEDNARAVEHLSALTDHAPEFAEGWHARAT-----ALYRAGLYGPALDAL 133 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + + P + N + +G+ + D+ + R++E + + K Sbjct: 134 HQALLLNPNNFN---AIFGLGV-MMREFGDLDR-------AARAFDRVLELHPHHKRAKA 182 Query: 178 ARFYVT 183 A+ + Sbjct: 183 AKEQMA 188 >gi|149372385|ref|ZP_01891573.1| hypothetical protein SCB49_01247 [unidentified eubacterium SCB49] gi|149354775|gb|EDM43338.1| hypothetical protein SCB49_01247 [unidentified eubacterium SCB49] Length = 987 Score = 43.2 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 66/222 (29%), Gaps = 45/222 (20%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A K + + +A F + + + + L + Y +A + Sbjct: 486 YNLAYNHFKLKQYPEAISNFKKYTTGTTETTREKDAYLRLGDSYFVTSDYWKAMENYNKA 545 Query: 121 ITQYPESKNVDYVYYLVGMSY-----------------AQMIRDVPYD------------ 151 + S + DY + +SY ++ + D Sbjct: 546 VELN--SPDKDYAAFQKAISYGFVDRTDSKITELSAFGSKYPKSFYRDDALYELGNSYAS 603 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q + +++ NS YV + + + G+ A+ Sbjct: 604 QNKNNEAISAYDKLITSLPNSSYVSKSLLKKALLLDI--------------SGDSNGALT 649 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 F+ V ++ A +A++ Y+ +DE E V+ + Sbjct: 650 TFKKVAKDFPSTPEAIQAVSSAKVIYIDEGRVDEYAEWVNTL 691 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 3/75 (4%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 V D++ ++ + F + + F++A +YFN+ S ++ F+ Sbjct: 108 DKVDGDNLPPSEREKYYFNNGYAFFQNKRFNEAKKYFNRVSDS---KEYGSQAKYYLGFI 164 Query: 104 QYSAGKYQQAASLGE 118 Y YQ+A L E Sbjct: 165 AYEGDDYQEANDLFE 179 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 76/236 (32%), Gaps = 49/236 (20%) Query: 51 VTDVRYQREVYEKAVLFLK-EQNF---SKAYEY------------FNQCSRDFPFAGVAR 94 +D E Y KAV ++++ KA Y + +P + Sbjct: 532 TSDYWKAMENYNKAVELNSPDKDYAAFQKAISYGFVDRTDSKITELSAFGSKYPKSFYRD 591 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 +L S K +A S ++ IT P S V + ++ D+ D Sbjct: 592 DALYELGNSYASQNKNNEAISAYDKLITSLPNSSYVS-----KSLLKKALLLDISGD--- 643 Query: 155 TKLMLQYMSRIVERYTNSPYVKGA--RFYVTVG----RNQLAA------------KEVEI 196 + L ++ + + ++P A V ++ A E++ Sbjct: 644 SNGALTTFKKVAKDFPSTPEAIQAVSSAKVIYIDEGRVDEYAEWVNTLNFVAIEDNELDD 703 Query: 197 GRY------YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 Y YL+ A RF+ L ++ + +HA A L + Y EA Sbjct: 704 ATYQAAEQPYLENKT-GQATTRFEAYLNDFPNGKHALSAHFYLAQLYFIDDKKQEA 758 >gi|260779146|ref|ZP_05888038.1| TPR repeat-containing protein [Vibrio coralliilyticus ATCC BAA-450] gi|260605310|gb|EEX31605.1| TPR repeat-containing protein [Vibrio coralliilyticus ATCC BAA-450] Length = 258 Score = 43.2 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 23/128 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A + +++ +P+S +Y +G Y +D K ++ + + Sbjct: 153 KKRDYTGAIAAFQQFQKDFPDSTFAPNAHYWLGQLYFAKKQD--------KEAVKSFASV 204 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V Y +S A + G + A +Q VL Y D+ Sbjct: 205 VS-YKDSNKRADALVKL--------------GDLSQRNNNAAQAKKYYQQVLDEYPDSAS 249 Query: 226 AEEAMARL 233 A+ A R+ Sbjct: 250 AKLAAERI 257 Score = 42.8 bits (100), Expect = 0.050, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 48/130 (36%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + + + +S + A +++ G+ Y Sbjct: 144 YQNAVDLILKKRDYTGAIAAFQQFQKDFPDSTFAPNAHYWL--------------GQLYF 189 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A+ F V+ +Y D+ +A+ +L + +A++ + + YP Sbjct: 190 AKKQDKEAVKSFASVV-SYKDSNKRADALVKLGDLSQRNNNAAQAKKYYQQVLDEYPDSA 248 Query: 262 WARYVETLVK 271 A+ +K Sbjct: 249 SAKLAAERIK 258 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 52/130 (40%), Gaps = 14/130 (10%) Query: 57 QREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ Y+ AV LK+++++ A F Q +DFP + A + + ++ + ++A Sbjct: 140 EQTAYQNAVDLILKKRDYTGAIAAFQQFQKDFPDSTFAPNAHYWLGQLYFAKKQDKEAV- 198 Query: 116 LGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + + + Y +S +G D+ +Y ++++ Y +S Sbjct: 199 --KSFASVVSYKDSNKRADALVKLG--------DLSQRNNNAAQAKKYYQQVLDEYPDSA 248 Query: 174 YVKGARFYVT 183 K A + Sbjct: 249 SAKLAAERIK 258 >gi|110834743|ref|YP_693602.1| LemA family protein [Alcanivorax borkumensis SK2] gi|110647854|emb|CAL17330.1| LemA family protein [Alcanivorax borkumensis SK2] Length = 215 Score = 43.2 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 11/86 (12%) Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--VEI 196 ++ + ++ QR LQ + + ERY + A ++QL E + + Sbjct: 106 LNNPEKLKQFEQAQRQLGSALQRLMVVAERYPD----LKANQNFLALQSQLEGTENRISV 161 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSD 222 R +Y+AA+ R+ + + Sbjct: 162 A-----RRDYIAAVQRYNTEIRTFPG 182 >gi|118379597|ref|XP_001022964.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89304731|gb|EAS02719.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 2086 Score = 43.2 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 40/276 (14%), Positives = 82/276 (29%), Gaps = 83/276 (30%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFA--------------------------- 90 Y+ + L+++++ A E F + + F A Sbjct: 1797 YQLGLALLEKKDYKGATEEFKETIRINERFTGAYKAIGLIYYENNNPSNACKYYLRALEC 1856 Query: 91 -GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----VYYLVG-----MS 140 +S L A Y + A EE I+ ++ ++Y YY+ G ++ Sbjct: 1857 DPFDMESKLGLANCYYLMENFDAAIQNYEE-ISGIDQNDEIEYNLANCYYMKGEINEAIN 1915 Query: 141 YAQMIRDVPYD--------------QRATKLMLQYMSRIVERYTN--------------- 171 + + ++ D Q K L + ++ Sbjct: 1916 HYKNALNLKQDKPDCLYNLGNAYCIQENFKEALICFEKAIQYDPQNSAAMYNLANTYYVL 1975 Query: 172 ------SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 S Y + A + + N + IG Y R ++ A F+ +Y + Sbjct: 1976 EDHEKASDYFEKA---IQLEPNNIEWHN-YIGGVYFGRNQFNEARRHFE---QSYKLSSD 2028 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + RL + + D A V+ + + P+ Sbjct: 2029 NIDTNYRLAQLNHSEGNNDAALHYVNFVISKQPENE 2064 Score = 35.5 bits (81), Expect = 8.6, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 52/156 (33%), Gaps = 30/156 (19%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +Y + ++NF +A F + + P ++ A Y +++A+ Sbjct: 1928 PDCLYNLGNAYCIQENFKEALICFEKAIQYDPQNS---AAMYNLANTYYVLEDHEKASDY 1984 Query: 117 GEEYITQYPESKNVDYVYYLVGM----------------SYAQMIRDVPYDQRATK---- 156 E+ I P N+++ Y+ G+ SY ++ + R + Sbjct: 1985 FEKAIQLEPN--NIEWHNYIGGVYFGRNQFNEARRHFEQSYKLSSDNIDTNYRLAQLNHS 2042 Query: 157 -----LMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 L Y++ ++ + + + + N Sbjct: 2043 EGNNDAALHYVNFVISKQPENEEANQLKREINELLN 2078 >gi|67922309|ref|ZP_00515822.1| hypothetical protein CwatDRAFT_4219 [Crocosphaera watsonii WH 8501] gi|67855885|gb|EAM51131.1| hypothetical protein CwatDRAFT_4219 [Crocosphaera watsonii WH 8501] Length = 169 Score = 43.2 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 24/67 (35%), Gaps = 2/67 (2%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRD-FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y++ L + + + + P + + + L K + A +L +E Sbjct: 12 YQEGQALLDRGQYRSSVKTLEEAKSLVNPSSKLGGEVQLSLVTAYQGINKLEDAIALCQE 71 Query: 120 YITQYPE 126 +T +P Sbjct: 72 -LTAHPN 77 >gi|194373627|dbj|BAG56909.1| unnamed protein product [Homo sapiens] Length = 486 Score = 43.2 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 20/149 (13%), Positives = 47/149 (31%), Gaps = 30/149 (20%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 + ++ E+ +A + K +++ A ++++Q P + + Y+ Sbjct: 18 EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS---------NAIYYGYA 68 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 G +A L ++YI YY S + + L+ +V Sbjct: 69 LGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAALRDYETVV 110 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + + A+ + K E Sbjct: 111 KVKPHDK---DAKMKYQECNKIVKQKAFE 136 >gi|239915965|ref|NP_033402.2| intraflagellar transport protein 88 homolog [Mus musculus] gi|148704224|gb|EDL36171.1| intraflagellar transport 88 homolog (Chlamydomonas) [Mus musculus] Length = 825 Score = 43.2 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 76/240 (31%), Gaps = 40/240 (16%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99 Q+S L +D + K ++ KA E++ D + +L Sbjct: 469 QASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYN 524 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + +A + ++ + +N V + Y +++ D + Sbjct: 525 IGLTYKKLNRLDEAL---DSFLKLHAILRNSAQVLCQIANIY-ELMEDPN-------QAI 573 Query: 160 QYMSRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVL 217 +++ +++ +S A + + K + +YY + Y + I + + Sbjct: 574 EWLMQLISVVPTDSQ----ALSKLGELYDSEGDKS-QAFQYYYESYRYFPSNIEVIEWLG 628 Query: 218 ANYSDAEHAEEAMARLVEA-----------------YVALALMDEAREVVSLIQERYPQG 260 A Y D + E+A+ A + +A + I ++P+ Sbjct: 629 AYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPEN 688 >gi|19705092|ref|NP_602587.1| TPR repeat-containing protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19713016|gb|AAL93886.1| Tetratricopeptide repeat family protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 628 Score = 43.2 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 59/195 (30%), Gaps = 37/195 (18%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVY--EKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 C + D + Y + + +S+A E +++ + P Sbjct: 68 ACSYYCSNKYDKAIEDYDKAIKLNPNDACYFNNRGHSYFALNKYSEAIEDYDKAIKLDPN 127 Query: 90 --AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 + ++ F Y+ KY +A + I P + +Y D Sbjct: 128 NASYYYKR-----GFSYYALNKYDKAIEDYNKAIKLDPNNA-----------AYFSSRGD 171 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 + Y ++A ++ ++ ++ N+ + LA Y K +Y Sbjct: 172 IYYYEKAYNKSIEDYNKAIKLDPNNAFYYD--------NRGLA---------YEKLKKYK 214 Query: 208 AAIPRFQLVLANYSD 222 AI + + + Sbjct: 215 EAINDYNKAIKLNPN 229 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 20/171 (11%), Positives = 47/171 (27%), Gaps = 42/171 (24%) Query: 53 DVRYQREVY--EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + ++Y + + + + + +A +N + A A Y + K Sbjct: 21 EKEPNNDIYYNNRGLSYFLLKKYEEAINDYNRAIELNLNNASY----YYNRACSYYCSNK 76 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y +A ++ I P Y + ++ + ++ Sbjct: 77 YDKAIEDYDKAIKLNPNDA-----------CYFNNRGHSYFALNKYSEAIEDYDKAIKLD 125 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 N+ YY KRG A+ ++ + +Y Sbjct: 126 PNN------------------------ASYYYKRGFSYYALNKYDKAIEDY 152 >gi|84687869|ref|ZP_01015737.1| TPR domain protein [Maritimibacter alkaliphilus HTCC2654] gi|84664124|gb|EAQ10620.1| TPR domain protein [Rhodobacterales bacterium HTCC2654] Length = 178 Score = 43.2 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 26/78 (33%), Gaps = 3/78 (3%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 ++ E+ + + ++ ++ A + F+ P A + AFV + Sbjct: 56 QAPPDKWSGELLDVGLERMRVADYEGAQKAFDALVEYCPT--WAE-AWNQRAFVYFRQED 112 Query: 110 YQQAASLGEEYITQYPES 127 Y + E + P Sbjct: 113 YAASLENIERALEIAPRH 130 >gi|301756633|ref|XP_002914155.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4-like [Ailuropoda melanoleuca] Length = 454 Score = 43.2 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 43/144 (29%), Gaps = 26/144 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109 E+ ++ KE + +A + + + A+K+ L A Sbjct: 270 ERGTVYFKEGKYKQAVLQYKKIVSWLEYESSFSNEDAQKAQALRLASHLNLAMCHLKLQA 329 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + D ++++ Y Sbjct: 330 FSAAIESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 378 Query: 170 TNSPYVKGARFYV--TVGRNQLAA 191 S A+ V R QLA Sbjct: 379 P-SNKAAKAQLAVCQQRIRKQLAR 401 Score = 35.5 bits (81), Expect = 7.2, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 2/78 (2%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYF 80 L ++A+C L ++ + ++ D ++ ++ + L +F A F Sbjct: 312 LRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADF 371 Query: 81 NQCSRDFPFAGVARKSLL 98 + + +P + A K+ L Sbjct: 372 QKVLQLYP-SNKAAKAQL 388 >gi|307565266|ref|ZP_07627759.1| tetratricopeptide repeat protein [Prevotella amnii CRIS 21A-A] gi|307345935|gb|EFN91279.1| tetratricopeptide repeat protein [Prevotella amnii CRIS 21A-A] Length = 861 Score = 43.2 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 11/115 (9%), Positives = 33/115 (28%), Gaps = 22/115 (19%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 ++ L +F + + L + +S+ +A + N++ Sbjct: 609 IRKMKSL-LFLFGILTIFTLSSFGINTSK-----------------NEANRLYNKGNYAA 650 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 A + + + ++ Y +A E + P+ ++ Sbjct: 651 AAQAYEFLLQK----NISPSLYYNLGNAYYKQDSIAKAVIAYERALRLSPDDNDI 701 >gi|154503253|ref|ZP_02040313.1| hypothetical protein RUMGNA_01077 [Ruminococcus gnavus ATCC 29149] gi|153796247|gb|EDN78667.1| hypothetical protein RUMGNA_01077 [Ruminococcus gnavus ATCC 29149] Length = 451 Score = 43.2 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 28/98 (28%), Gaps = 12/98 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y+ + L N+ A + + + +LL +G + A + Sbjct: 357 YQNGMAALNVANYETAIDALGKVVRMDEQYDSGA----ALLNLGIAYMRSGDNENAKTYF 412 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 +P ++N S + D D T Sbjct: 413 NRVAELFPGTENEA-----TAKSNLNSMGDTTADDTKT 445 >gi|74149301|dbj|BAE22424.1| unnamed protein product [Mus musculus] Length = 825 Score = 43.2 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 76/240 (31%), Gaps = 40/240 (16%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99 Q+S L +D + K ++ KA E++ D + +L Sbjct: 469 QASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYN 524 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + +A + ++ + +N V + Y +++ D + Sbjct: 525 IGLTYKKLNRLDEAL---DSFLKLHAILRNSAQVLCQIANIY-ELMEDPN-------QAI 573 Query: 160 QYMSRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVL 217 +++ +++ +S A + + K + +YY + Y + I + + Sbjct: 574 EWLMQLISVVPTDSQ----ALSKLGELYDSEGDKS-QAFQYYYESYRYFPSNIEVIEWLG 628 Query: 218 ANYSDAEHAEEAMARLVEA-----------------YVALALMDEAREVVSLIQERYPQG 260 A Y D + E+A+ A + +A + I ++P+ Sbjct: 629 AYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPEN 688 >gi|271500232|ref|YP_003333257.1| tetratricopeptide domain-containing protein [Dickeya dadantii Ech586] gi|270343787|gb|ACZ76552.1| tetratricopeptide domain protein [Dickeya dadantii Ech586] Length = 389 Score = 43.2 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 58/185 (31%), Gaps = 36/185 (19%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ + +A E F Q + F A + L+ S + A E+ + Sbjct: 114 GRDYMVAGLYDRAEEIFKQLVDEEDFRVSALQ-QLLQI--HQSTSDWPNAIDTAEKLVKL 170 Query: 124 YPESKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 G + + I +Q LQ M S + A + Sbjct: 171 --------------GKTQFRSEIAHFYCEQ-----ALQAM--------GSDDLDKALAML 203 Query: 183 T---VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 +Q A + +GR Y+ + Y A+ Q VL D E E + L E Y Sbjct: 204 KKASAADSQCARVSIMLGRIYMAQQNYTQAVTLLQQVLE--QDTELVSETLPMLQECYRH 261 Query: 240 LALMD 244 L + Sbjct: 262 LQQPE 266 >gi|1663530|gb|AAB18614.1| phosphoprotein phosphatase [Rattus norvegicus] Length = 479 Score = 43.2 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 47/148 (31%), Gaps = 31/148 (20%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF----VQ-YSA 107 + E+ +A + K +++ A ++++Q P +S A+ Y+ Sbjct: 6 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLRTECYGYAL 62 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G +A L ++YI YY S + + L+ +V+ Sbjct: 63 GDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAALRDYETVVK 104 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVE 195 N A+ + K E Sbjct: 105 VKPNDK---DAKMKYQECSKIVKQKAFE 129 >gi|18202593|sp|Q61371|IFT88_MOUSE RecName: Full=Intraflagellar transport protein 88 homolog; AltName: Full=Recessive polycystic kidney disease protein Tg737; AltName: Full=Tetratricopeptide repeat protein 10; Short=TPR repeat protein 10; AltName: Full=TgN(Imorpk)737Rpw gi|499647|gb|AAB59705.1| unknown [Mus musculus] Length = 824 Score = 43.2 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 76/240 (31%), Gaps = 40/240 (16%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99 Q+S L +D + K ++ KA E++ D + +L Sbjct: 468 QASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYN 523 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + +A + ++ + +N V + Y +++ D + Sbjct: 524 IGLTYKKLNRLDEAL---DSFLKLHAILRNSAQVLCQIANIY-ELMEDPN-------QAI 572 Query: 160 QYMSRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVL 217 +++ +++ +S A + + K + +YY + Y + I + + Sbjct: 573 EWLMQLISVVPTDSQ----ALSKLGELYDSEGDKS-QAFQYYYESYRYFPSNIEVIEWLG 627 Query: 218 ANYSDAEHAEEAMARLVEA-----------------YVALALMDEAREVVSLIQERYPQG 260 A Y D + E+A+ A + +A + I ++P+ Sbjct: 628 AYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPEN 687 >gi|190575257|ref|YP_001973102.1| hypothetical protein Smlt3384 [Stenotrophomonas maltophilia K279a] gi|190013179|emb|CAQ46812.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a] Length = 374 Score = 43.2 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 4/73 (5%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 ++L A+ + G QQA +L E I + V Y++Y+ G+++ + +RD + Sbjct: 69 QALEARAYAVFREGDLQQAVALFGELIAL---APEVPYLHYMRGLAH-KYLRDWAASLQD 124 Query: 155 TKLMLQYMSRIVE 167 + Q E Sbjct: 125 NRQSEQLRGEFDE 137 >gi|218779809|ref|YP_002431127.1| hypothetical protein Dalk_1963 [Desulfatibacillum alkenivorans AK-01] gi|218761193|gb|ACL03659.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans AK-01] Length = 233 Score = 43.2 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 14/125 (11%), Positives = 36/125 (28%), Gaps = 16/125 (12%) Query: 64 AVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 N+ +A E++N+ + ++LL + Y +A + + + Sbjct: 118 GQTAYDAGNYDEAIEWWNKSLKALSGDPIESSRALLGLGYAYEQTADYDKALEMYNKVLG 177 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYD---QRATKLMLQYMSRIVERYTNSPYVKGAR 179 +G+ + V + +Q + Y S Y + + Sbjct: 178 V------------KMGLGKEEAALAVARIYEVKGDADKSVQAYEKFAADYPGSAYAQMVK 225 Query: 180 FYVTV 184 + Sbjct: 226 EKLAA 230 >gi|163801222|ref|ZP_02195121.1| Peptidase C39, bacteriocin processing [Vibrio sp. AND4] gi|159174711|gb|EDP59511.1| Peptidase C39, bacteriocin processing [Vibrio sp. AND4] Length = 1546 Score = 43.2 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 50/140 (35%), Gaps = 23/140 (16%) Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 M++ Q I++ Q A+ ++Y NS + A ++ R Sbjct: 90 MAFGQAIQNWNKHQYAS--ASVEFDIFRKKYPNSAWASEATLHMA-CN----------AR 136 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEH------AEEAMARLVEAYVALALMDEAREVVSL 252 + G+Y A F V+ D+E+ +A +RL + +EA+ + + Sbjct: 137 F---TGQYSTANQLFNEVIQTNQDSEYSGAQQMVAKAKSRLAVLRLMENNPEEAKTLFAE 193 Query: 253 IQERYPQGYWARYVE-TLVK 271 + + P Y L K Sbjct: 194 VVKNAPDWRLRSYASIWLRK 213 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 56/142 (39%), Gaps = 7/142 (4%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA-FVQYSAGK 109 +D +R + +A+ + ++ A F+ + +P + A ++ L A ++ G+ Sbjct: 82 ASDDEQERMAFGQAIQNWNKHQYASASVEFDIFRKKYPNSAWASEATLHMACNARF-TGQ 140 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y A L E I +S+ +V + +++ + + + + +V+ Sbjct: 141 YSTANQLFNEVIQTNQDSEYSG-AQQMVAKAKSRLAV-LRLMENNPEEAKTLFAEVVKNA 198 Query: 170 TNSP---YVKGARFYVTVGRNQ 188 + Y +++ +NQ Sbjct: 199 PDWRLRSYASIWLRKLSLLKNQ 220 >gi|315917695|ref|ZP_07913935.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] gi|317059219|ref|ZP_07923704.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R] gi|313684895|gb|EFS21730.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R] gi|313691570|gb|EFS28405.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] Length = 407 Score = 43.2 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAE-EAMARLVEAYVALALMDEAREVVSLIQERYP 258 Y G+Y +I FQ L++ ++ E +L AY L E ++ ++L++ERY Sbjct: 330 YYGLGKYQQSIEYFQKSLSHKGNSSERRAETYYKLASAYNKLGEKREYKKYLTLLKERYA 389 Query: 259 QGYWARYVE 267 W + + Sbjct: 390 NSLWGKKAQ 398 >gi|213406543|ref|XP_002174043.1| serine/threonine-protein phosphatase [Schizosaccharomyces japonicus yFS275] gi|212002090|gb|EEB07750.1| serine/threonine-protein phosphatase [Schizosaccharomyces japonicus yFS275] Length = 471 Score = 43.2 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 35/132 (26%), Gaps = 25/132 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119 + E ++A + + + P + +S F Y A + Sbjct: 8 NQGNKLFGEGRLAEAIKCYTKAIELDPENAIFYSNRS-----FAYLKLEDYGFAIEDATK 62 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-------S 172 I + P+ YY +++ + + K L+ V N S Sbjct: 63 AIEKNPKYPKG---YYRRAVAHMALYQ--------PKEALKDFKNAVRYAPNDKSALQKS 111 Query: 173 PYVKGARFYVTV 184 + + Sbjct: 112 QECEKLVRRIRF 123 >gi|162456117|ref|YP_001618484.1| hypothetical protein sce7834 [Sorangium cellulosum 'So ce 56'] gi|161166699|emb|CAN98004.1| hypothetical protein sce7834 [Sorangium cellulosum 'So ce 56'] Length = 319 Score = 43.2 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 33/91 (36%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 A VG ++ + + + + +A L + ++A + +P + Sbjct: 171 ATASAVGARDRAQQPPRPRAEEPAAGPQALLLRAQTQLGQGKSAEANASYRALLAQYPAS 230 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 AR +L+ + GK +A + Y+ Sbjct: 231 PEARAALVSLGQIALHQGKAAEALGYFDRYL 261 >gi|124023886|ref|YP_001018193.1| hypothetical protein P9303_21931 [Prochlorococcus marinus str. MIT 9303] gi|123964172|gb|ABM78928.1| Hypothetical protein P9303_21931 [Prochlorococcus marinus str. MIT 9303] Length = 387 Score = 43.2 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 43/128 (33%), Gaps = 15/128 (11%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 +D + + + Y ++K + + +A + N+ DFP +S Sbjct: 221 KDRWGPEPKASISEEKYYLF-KTYVKNKQYKEALKLSNKLVIDFPDDP---RSWTHLGVA 276 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + Y A + I P ++ YY G+ Y+ + ++ + Sbjct: 277 YFILKDYSAAKEQLNKAIFINPLFED---AYYNRGLVYSAL--------GLYDQAIRDYT 325 Query: 164 RIVERYTN 171 + + Y + Sbjct: 326 KAIRMYPD 333 >gi|115752602|ref|XP_797370.2| PREDICTED: similar to Transmembrane and tetratricopeptide repeat containing 3 [Strongylocentrotus purpuratus] gi|115939107|ref|XP_001195096.1| PREDICTED: similar to Transmembrane and tetratricopeptide repeat containing 3 [Strongylocentrotus purpuratus] Length = 844 Score = 43.2 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 43/122 (35%), Gaps = 17/122 (13%) Query: 53 DVRYQREVYEKAVLFLKEQN---FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D +++ +Y A+ + N A + + P + ++ +L M A Sbjct: 634 DPKHKMALYNSALYIQESGNAARRQDAIKRLQKVIEIDPESEMSYSTLGMLAV---DDND 690 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 A ++ + P S++ + + M ++ D + Y+ +++ + Sbjct: 691 NPGALQYYQKALEINPSSRH---ALFNIAMIHS--------DDKHPLQAKPYLENLLQHH 739 Query: 170 TN 171 N Sbjct: 740 PN 741 >gi|70998482|ref|XP_753963.1| serine/threonine protein phosphatase PPT1 [Aspergillus fumigatus Af293] gi|66851599|gb|EAL91925.1| serine/threonine protein phosphatase PPT1 [Aspergillus fumigatus Af293] gi|159126304|gb|EDP51420.1| serine/threonine protein phosphatase PPT1 [Aspergillus fumigatus A1163] Length = 480 Score = 43.2 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 17/151 (11%), Positives = 47/151 (31%), Gaps = 27/151 (17%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYS 106 + +D+ + + E + A E++ Q + P + + ++ Sbjct: 2 AASDLEAATALKVQGNKAFAEHEWPTAVEFYTQAIDKYDREP-SFFSNRAQ-----AYIK 55 Query: 107 AGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y A + + + P Y Y+ ++ ++ + L+ Sbjct: 56 LEAYGFAIADATKALELDPS-----YVKAYWRRALANTAILN--------YREALKDFKA 102 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 +V++ N+ A+ + + E E Sbjct: 103 VVKKEPNNR---DAKLKLAECEKLVRRLEFE 130 >gi|257452679|ref|ZP_05617978.1| hypothetical protein F3_06399 [Fusobacterium sp. 3_1_5R] gi|257466540|ref|ZP_05630851.1| hypothetical protein FgonA2_03768 [Fusobacterium gonidiaformans ATCC 25563] Length = 410 Score = 43.2 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAE-EAMARLVEAYVALALMDEAREVVSLIQERYP 258 Y G+Y +I FQ L++ ++ E +L AY L E ++ ++L++ERY Sbjct: 333 YYGLGKYQQSIEYFQKSLSHKGNSSERRAETYYKLASAYNKLGEKREYKKYLTLLKERYA 392 Query: 259 QGYWARYVE 267 W + + Sbjct: 393 NSLWGKKAQ 401 >gi|225851470|ref|YP_002731704.1| TPR Domain containing protein [Persephonella marina EX-H1] gi|225644946|gb|ACO03132.1| TPR Domain containing protein [Persephonella marina EX-H1] Length = 345 Score = 43.2 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 11/94 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKY 110 D Y ++L+E N KA +Y + +K+ + + G Sbjct: 56 DKNNPESYYYLGSIYLEEGNPEKAVKYLKKAVEK------GKKAEYFNDLGYAYFLKGDP 109 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 ++A + I P ++ YY G+++ +M Sbjct: 110 EKAIKCYTKAIEIKP---DLAVAYYNRGLAFKKM 140 Score = 38.9 bits (90), Expect = 0.71, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 33/103 (32%), Gaps = 21/103 (20%) Query: 47 YLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 YL + + E + + + + KA + + + A + A Y Sbjct: 82 YLKKAVEKGKKAEYFNDLGYAYFLKGDPEKAIKCYTK----------AIEIKPDLAVAYY 131 Query: 106 -------SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 G Y +A I PE DY YY +G+ Y Sbjct: 132 NRGLAFKKMGDYDEAVKNYNRAIALNPEDP--DY-YYNLGIVY 171 >gi|71907800|ref|YP_285387.1| putative lipoprotein [Dechloromonas aromatica RCB] gi|71847421|gb|AAZ46917.1| putative lipoprotein [Dechloromonas aromatica RCB] Length = 205 Score = 43.2 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 38/108 (35%), Gaps = 13/108 (12%) Query: 14 AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73 + ++ AL S+A+ G + S++ + ++ + L++ N Sbjct: 1 MFTFKRLSVALVFSASVAISGCAGNKPSMSQEEFSAAMAQSSMSVD------SLLEKGNQ 54 Query: 74 SKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +A + ++ P + A V + A Y QA EE Sbjct: 55 EEAVKVLGDLAKRNPGRKEPW-----IRMAKVHFDAENYAQAIVAAEE 97 >gi|304321214|ref|YP_003854857.1| hypothetical protein PB2503_08299 [Parvularcula bermudensis HTCC2503] gi|303300116|gb|ADM09715.1| hypothetical protein PB2503_08299 [Parvularcula bermudensis HTCC2503] Length = 296 Score = 43.2 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 14/104 (13%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + + VE++ + A++ + G YL G A F Sbjct: 188 REAEAKLEAFVEKFPEAAQTADAKYLL--------------GDVYLATGANGEAARIFLD 233 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + Y D A EA +L +++ L +EA V++ ++++P Sbjct: 234 HVRTYRDDPKAPEAYLKLGKSFSLLNRPEEACRVLTAGEQKFPD 277 Score = 35.5 bits (81), Expect = 7.4, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 8/76 (10%) Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 A Y++A + E ++ ++PE+ YL+G DV A + V Sbjct: 184 AANYREAEAKLEAFVEKFPEAAQTADAKYLLG--------DVYLATGANGEAARIFLDHV 235 Query: 167 ERYTNSPYVKGARFYV 182 Y + P A + Sbjct: 236 RTYRDDPKAPEAYLKL 251 >gi|254410290|ref|ZP_05024070.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196183326|gb|EDX78310.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 667 Score = 43.2 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 16/124 (12%), Positives = 40/124 (32%), Gaps = 14/124 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + Y ++ K + +A + + + P A + + G+ ++ Sbjct: 548 NPDYPEALWSKGAALDQLGRHQEALNLYEKATTLKP--DFAE-AWINQGVALILLGQPEK 604 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A + + I P S N + +Y ++ R + + + +E N+ Sbjct: 605 AIPILDRAIQLKPNSAN---AWINKAEAYMELERYDD--------AIASLKKALEIQPNN 653 Query: 173 PYVK 176 Y Sbjct: 654 EYAA 657 >gi|86139144|ref|ZP_01057714.1| hypothetical protein MED193_09145 [Roseobacter sp. MED193] gi|85823988|gb|EAQ44193.1| hypothetical protein MED193_09145 [Roseobacter sp. MED193] Length = 280 Score = 43.2 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 29/85 (34%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 G + V ++ ++ A L+E + A E F ++ +P + + Sbjct: 133 ALAAGGAPVGDQGVSPGGGELAVGEQADFDTAQQDLEEGAYQLAAEKFAIFTQSYPGSPL 192 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLG 117 A ++ G ++AA Sbjct: 193 APEADFNRGKALDGLGDTREAARAY 217 Score = 35.5 bits (81), Expect = 7.8, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 39/114 (34%), Gaps = 16/114 (14%) Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA-KEVEIGRYYLKRGEYV 207 ++ A +L + + + Y SP A F + L +E R YL + Sbjct: 167 DLEEGAYQLAAEKFAIFTQSYPGSPLAPEADFNRGKALDGLGDTRE--AARAYL--ASFT 222 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A +A+ L A L +D+A +S + R+P G Sbjct: 223 GDANGAT-----------APKALFELGAALGRLGQVDQACITLSEVGVRFPGGD 265 >gi|213018745|ref|ZP_03334553.1| TPR domain protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995696|gb|EEB56336.1| TPR domain protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 264 Score = 43.2 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 34/92 (36%), Gaps = 6/92 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 S + + ++Y KA + + A NQ FP+ +L+ Sbjct: 52 KSDKFNIKISQNSGKNFDIYSILKKAKDSFELGDSETATSLLNQIIAKFPYH---ESALI 108 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + Y+ ++++A + + +YP + V Sbjct: 109 GLGNIYYANKEFKKAVEIYTRLLKEYPSNPYV 140 >gi|190571349|ref|YP_001975707.1| TPR domain protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357621|emb|CAQ55062.1| TPR domain protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 288 Score = 43.2 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 34/92 (36%), Gaps = 6/92 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 S + + ++Y KA + + A NQ FP+ +L+ Sbjct: 76 KSDKFNIKISQNSGKNFDIYSILKKAKDSFELGDSETATSLLNQIIAKFPYH---ESALI 132 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + Y+ ++++A + + +YP + V Sbjct: 133 GLGNIYYANKEFKKAVEIYTRLLKEYPSNPYV 164 >gi|218439798|ref|YP_002378127.1| lytic transglycosylase catalytic [Cyanothece sp. PCC 7424] gi|218172526|gb|ACK71259.1| Lytic transglycosylase catalytic [Cyanothece sp. PCC 7424] Length = 724 Score = 43.2 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 34/248 (13%), Positives = 78/248 (31%), Gaps = 54/248 (21%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR----DFPFAGVARKSLLM 99 RD + + + + + + A + + + R + + Sbjct: 221 RDRLVKDYSQQLTPEDWEAIGNGYWEIGQYENAAKAYYKAPRTPVNLYRYGR-------- 272 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + GK QA ++ + ++P++ GM +++ ++ L Sbjct: 273 ---GLHINGKKAQAKQAYQQLLREFPDAPET-------GMGIMRLVSLSE-----SREAL 317 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQL-----------------------AAKEVEI 196 Y+ + ++ A +QL A ++ Sbjct: 318 GYLDYAINKFPQQ--APDALLKKAEILDQLGSKTSASKARQQLLDQYGSSETAAEYRWKV 375 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV-VSLIQE 255 + Y +GE+V A Q + SD A +A + + L +AR+ + + Sbjct: 376 AKSYGDKGEFVKAWEWAQPITIKASDTNVAPKAAYWIGKWAQKLNRPQDARDAFLHTLGR 435 Query: 256 RYPQGYWA 263 +PQ Y+A Sbjct: 436 -HPQSYYA 442 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 27/205 (13%), Positives = 52/205 (25%), Gaps = 59/205 (28%) Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 + +A LL + ++A + I YP+ V Y +G Sbjct: 117 YPTLAPYILLKQGRGYELTNENERAQEAWLKLIETYPQDPVVAEALYFLG---------- 166 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFY------------------------VTV 184 YD + + + ++ P + Sbjct: 167 KYDPQYWEQA-------IAQFPQHPRTWDIIQQRLKENPKQPQLMLLLVKHNIFAPEINE 219 Query: 185 GRNQLAAKEVE----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 R++L K+ IG Y + G+Y A Y A + R Sbjct: 220 VRDRLV-KDYSQQLTPEDWEAIGNGYWEIGQYENAA-------KAYYKAPRTPVNLYRYG 271 Query: 235 EAYVALALMDEAREVVSLIQERYPQ 259 +A++ + +P Sbjct: 272 RGLHINGKKAQAKQAYQQLLREFPD 296 >gi|126738723|ref|ZP_01754419.1| TPR domain protein [Roseobacter sp. SK209-2-6] gi|126719904|gb|EBA16611.1| TPR domain protein [Roseobacter sp. SK209-2-6] Length = 189 Score = 43.2 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 14/123 (11%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ +A L++ + A E+ + P A + L+ A Y+AG Y A + E Sbjct: 72 LFSRAQKALEQGEVAAATEHLTALTDHAP--DFA-RGWLLRARALYAAGYYGPAVADLER 128 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P + + Q++ V K Q R + + V A Sbjct: 129 ALALNPNDYDAIFAL-------GQVLETVQRP----KRAYQAYLRAKSIHPHHEEVTTAL 177 Query: 180 FYV 182 + Sbjct: 178 ERL 180 >gi|329893837|ref|ZP_08269908.1| hypothetical protein IMCC3088_2332 [gamma proteobacterium IMCC3088] gi|328923436|gb|EGG30751.1| hypothetical protein IMCC3088_2332 [gamma proteobacterium IMCC3088] Length = 698 Score = 43.2 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 85/246 (34%), Gaps = 39/246 (15%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LT+ F++A V ++ + ++A L ++ Sbjct: 474 LTLAFALAGIADVNLSTAQAQQLRTLDTEYRAIAERHLDQAEQHLSLGDYETRQGNIEAA 533 Query: 84 SRDFPFAGVARKSLLMSAFVQY-----SAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 R + + + L++A++ ++G Q+A + E +TQ ++ ++ + G Sbjct: 534 LRRY-QTALTKNPQLLAAYINKADVEANSGNNQEAINTLERGLTQIADNPDLAFAL---G 589 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +++ IR+ Y Q T+L + AR+ T +A Sbjct: 590 LAH---IRNQDYRQGLTQLASAA------------KAESARYRYTYA---IALH------ 625 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 +G+ AI + V + + EEA+ LV+ A E V + E P Sbjct: 626 ---GQGKLHDAIRTLRGVSRKWPN---NEEALQALVQFAAEADDTRTALEAVRQLTELAP 679 Query: 259 QGYWAR 264 + Sbjct: 680 NNRQYQ 685 >gi|220928873|ref|YP_002505782.1| tetratricopeptide TPR_2 [Clostridium cellulolyticum H10] gi|219999201|gb|ACL75802.1| tetratricopeptide TPR_2 [Clostridium cellulolyticum H10] Length = 374 Score = 43.2 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 16/120 (13%), Positives = 38/120 (31%), Gaps = 4/120 (3%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 Y YK+ +A+ + + + ++ + ++ + + Sbjct: 249 LYGQYKYIEAADKLLAIPEKDLSADNKKKYDSIKANVLKNAANQLTIEGTSLYNKKKYKE 308 Query: 76 AYEYFNQCSRDFPFAGVA--RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A + + + K+L +A + Q+ A I+ YP+S V Y Sbjct: 309 AIQKLEKVFTL--GTKWSFGDKALYTLGKSYVAANEPQKGAEAYNRLISDYPDSAYVKYA 366 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 31/71 (43%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + +Y AI + + V + ++A+ L ++YVA + E + + YP Sbjct: 301 YNKKKYKEAIQKLEKVFTLGTKWSFGDKALYTLGKSYVAANEPQKGAEAYNRLISDYPDS 360 Query: 261 YWARYVETLVK 271 + +Y + ++ Sbjct: 361 AYVKYARSRLQ 371 >gi|75675934|ref|YP_318355.1| hypothetical protein Nwi_1742 [Nitrobacter winogradskyi Nb-255] gi|74420804|gb|ABA05003.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255] Length = 451 Score = 43.2 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 22/174 (12%), Positives = 56/174 (32%), Gaps = 33/174 (18%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 ++ ++ CF + ++ + ++ ++ Y+ + + + Sbjct: 11 SVLLTMTACFSGAAAQSTTSPISASLISAASAVQQDYDALFQQM----YKNPAD----LE 62 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 F A +++ G Y+ A E + P N+ V +G+ Y ++ Sbjct: 63 ASF---KFAEQAV--------KRGDYEAAIGALERMLFFNP---NLPRVKLELGVLYFKL 108 Query: 145 IRDVPYDQRATKLMLQYMSRIVE--RYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 + +L Y ++ + R Y+T +LA E + Sbjct: 109 --------GSYELARSYFQEAIKGADAPDDIRA-QVRAYLTEIDRRLARYEFSV 153 >gi|332707691|ref|ZP_08427719.1| hypothetical protein LYNGBM3L_54490 [Lyngbya majuscula 3L] gi|332353600|gb|EGJ33112.1| hypothetical protein LYNGBM3L_54490 [Lyngbya majuscula 3L] Length = 463 Score = 43.2 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 37/111 (33%), Gaps = 14/111 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A +L++ A E + P ++ Y G A + + Sbjct: 85 YLLANTYLQQGKNQLALEQYQIAIALDPTLS---QAYYNLGIAFYKEGAPDSAIAAYRQA 141 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 ++ PES ++ YY +G++ Q + +++ + + Sbjct: 142 LSFNPESADI---YYNLGLALES--------QGNQEEAIEHYQATIRLDPD 181 >gi|308535397|ref|YP_002140778.2| peptidoglycan L,D-transpeptidase lipoprotein [Geobacter bemidjiensis Bem] gi|308052742|gb|ACH40982.2| peptidoglycan L,D-transpeptidase lipoprotein, YkuD family, TPR domain-containing protein [Geobacter bemidjiensis Bem] Length = 335 Score = 43.2 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 19/183 (10%), Positives = 48/183 (26%), Gaps = 53/183 (28%) Query: 5 LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64 +G + + + L + + + G + +E+A Sbjct: 1 MGEGMREVRRVSRNWEQLCLFVVLATILFTAGGCSH----------LDGTFGAGSAFEEA 50 Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 +++ A + + S+ +P ++L ++ I + Sbjct: 51 NRHSVLRDYQAALKGYELASKKYPTT--GDRAL------------FEMGI------IHSH 90 Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 P++ DY L +++ Y S Y + + V Sbjct: 91 PDNPQKDY-----------------------GKALDCYRTLIKEYPRSSYRQDSEMMVFY 127 Query: 185 GRN 187 N Sbjct: 128 LVN 130 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 30/71 (42%), Gaps = 6/71 (8%) Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARL--VEAYVALALMD--EAREVVSLIQERYPQ 259 +Y AA+ ++L Y + A+ + + ++ D +A + + + YP+ Sbjct: 57 RDYQAALKGYELASKKYPTTG--DRALFEMGIIHSHPDNPQKDYGKALDCYRTLIKEYPR 114 Query: 260 GYWARYVETLV 270 + + E +V Sbjct: 115 SSYRQDSEMMV 125 >gi|307944548|ref|ZP_07659888.1| tetratricopeptide TPR2 protein [Roseibium sp. TrichSKD4] gi|307772297|gb|EFO31518.1| tetratricopeptide TPR2 protein [Roseibium sp. TrichSKD4] Length = 308 Score = 43.2 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 12/114 (10%), Positives = 33/114 (28%), Gaps = 14/114 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A ++ A F ++P ++ + + Y+ A + + Sbjct: 187 YDSAYGLAVNGDYQGAENGFRAFLSNYPGHQLSSNAQYWLGESLLAQNNYRDA---ADAF 243 Query: 121 ITQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + Y + N +G+S + ++ ++ N Sbjct: 244 LKTYTDHPNSSKSADSLLKLGVSL--------RGLGEIDAACATFTELLNKFPN 289 Score = 39.3 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 26/84 (30%), Gaps = 8/84 (9%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 SA+ G YQ A + +++ YP + Y +G S Q + Sbjct: 188 DSAYGLAVNGDYQGAENGFRAFLSNYPGHQLSSNAQYWLGESLLA--------QNNYRDA 239 Query: 159 LQYMSRIVERYTNSPYVKGARFYV 182 + + NS + + Sbjct: 240 ADAFLKTYTDHPNSSKSADSLLKL 263 >gi|296412888|ref|XP_002836151.1| hypothetical protein [Tuber melanosporum Mel28] gi|295629958|emb|CAZ80342.1| unnamed protein product [Tuber melanosporum] Length = 818 Score = 43.2 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 45/139 (32%), Gaps = 22/139 (15%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108 D + Y ++ +Q + KAYE + Q P + Y Sbjct: 290 ADNSDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 343 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y+ A I P + V+Y +G + + + D L R E Sbjct: 344 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQTND------ALDAYQRAAEL 393 Query: 169 YTNSPYVKGARFYVTVGRN 187 + ++ + +++ RN Sbjct: 394 DPTNQHI---KARLSLLRN 409 >gi|255571385|ref|XP_002526641.1| conserved hypothetical protein [Ricinus communis] gi|223534033|gb|EEF35753.1| conserved hypothetical protein [Ricinus communis] Length = 227 Score = 43.2 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 10/113 (8%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF-- 87 +A+ Q+ +D + V + EK + +FS A YF ++ Sbjct: 68 LALAESYDPVSQAEKDASANKSQRVSEAIGLLEKGRELQAQGDFSAALPYFTLVVENYKD 127 Query: 88 -PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY-ITQ--YPE-SKNVDYVYY 135 F+ AR + A Y G Q+A + E+ I+ YPE + Y Sbjct: 128 FAFSEYAR---VGRALALYEVGDKQEAIAEMEDVSISLKGYPEVHAALAAALY 177 >gi|303326657|ref|ZP_07357099.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3] gi|302862645|gb|EFL85577.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3] Length = 1004 Score = 43.2 bits (101), Expect = 0.043, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 75/228 (32%), Gaps = 34/228 (14%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--- 101 D + V ++ +A + E F +A + R+ +L Sbjct: 319 DEQGNPVPKPPEPDKMLAEAERLISENKFDEALPQLEKIRALTDITPEMREKVLYYISDC 378 Query: 102 -FVQYSAGK---YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + +Y+ Y+ S E + S V +G++ + V Sbjct: 379 LWARYADNPLAGYEAIVSSTSEAMNADLRSPRVPDALLRLGLANVNVGNLVD-------- 430 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 Y+ ++ RY + Y A+ + +G+ QL KR A F +VL Sbjct: 431 AGGYIVALLRRYPD--YPGVAQGFTALGQAQL------------KRKLNAEAEQSFSIVL 476 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 Y ++ + A L +A+ D+A+ I + W RY Sbjct: 477 DKYPESSQLQAASVGLAQAFFNQKKHDQAQ-----IILDFISKRWPRY 519 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 17/140 (12%), Positives = 46/140 (32%), Gaps = 12/140 (8%) Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYVKGA-RFYVTV 184 ++ Y + + RD ++ K + ++++ +T A + Sbjct: 835 PDIP--LYQRAYATYFLARDAEN-RKDIKSSYELNRKVIDLFTQLQDERSDKADPQRIKD 891 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 L ++I + E + + R+ + ++ R Y L Sbjct: 892 AVAAL----MDICEVGNRIPEALQWVNRYNDFVPE--NSPEYPGLRFREARLYRKLGNSS 945 Query: 245 EAREVVSLIQERYPQGYWAR 264 A+ ++ + R+P +A+ Sbjct: 946 RAQALLEDLARRFPDSPFAK 965 Score = 35.1 bits (80), Expect = 9.7, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 57/173 (32%), Gaps = 23/173 (13%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI-T 122 LK + ++A + F+ +P + + + + A ++ K+ QA + + +I Sbjct: 456 GQAQLKRKLNAEAEQSFSIVLDKYPESSQLQAASVGLAQAFFNQKKHDQAQIILD-FISK 514 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 ++P YY+ S+ + + L + + Sbjct: 515 RWPR-------YYIGEPSFLLLQAGNDETLQRIDTALDLYWLYINLEPGRQGNDSILLKM 567 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 G YL++G AA + + ++ + A A RL E Sbjct: 568 --------------GDTYLRQGNATAADFIYHELERRFAASPAASTARLRLAE 606 >gi|258545745|ref|ZP_05705979.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] gi|258518990|gb|EEV87849.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] Length = 193 Score = 43.2 bits (101), Expect = 0.043, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 20/66 (30%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +E+ + + N + A F Q A ++ Y Y A+ Y Sbjct: 92 FEEGLAQYRAGNLNGAIGTFEQYLNSGASGPEAAQAQYWLGDAYYMQRNYDMASRYLGAY 151 Query: 121 ITQYPE 126 + P Sbjct: 152 LKAQPN 157 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 8/91 (8%) Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 QY AG A E+Y+ Y +G +Y QR + +Y+ Sbjct: 97 AQYRAGNLNGAIGTFEQYLNSGASGPEAAQAQYWLGDAYYM--------QRNYDMASRYL 148 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 ++ N + A + + E Sbjct: 149 GAYLKAQPNGDRAQAALSRLVESLRAMGRTE 179 >gi|163785664|ref|ZP_02180201.1| hypothetical protein HG1285_19011 [Hydrogenivirga sp. 128-5-R1-1] gi|159879068|gb|EDP73035.1| hypothetical protein HG1285_19011 [Hydrogenivirga sp. 128-5-R1-1] Length = 248 Score = 43.2 bits (101), Expect = 0.043, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 50/174 (28%), Gaps = 35/174 (20%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 ++ A Q +P A + + ++A + ++ + Sbjct: 36 NDYPDAINTLKQYLEKYPQGEYALNVKSLLVKIYIKQKDLKKAIEVLKQM-------PDT 88 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP---------------YV 175 D Y + + Y ++ Y + R+ Y Sbjct: 89 DENRYQLAVLYYKL--------GDLTQAKSYFEDLYTRFPKYRNDIAYYLAKIQLKLGYP 140 Query: 176 KGARFYVTVGR-----NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + A+ Y+ N +A +G Y + G A+ F V+ Y +A+ Sbjct: 141 QLAKKYLEEAVNGSDYNHVAESYYLLGLIYQQEGNLEKALNNFVNVVYLYPEAK 194 Score = 35.9 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 35/103 (33%), Gaps = 21/103 (20%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + + +E+Y Y + + Y+K+ + AI V Sbjct: 40 DAINTLKQYLEKYPQGEYALNVKSLLVKI--------------YIKQKDLKKAI----EV 81 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 L D + +A L Y L + +A+ + R+P+ Sbjct: 82 LKQMPDTDENRYQLAVL---YYKLGDLTQAKSYFEDLYTRFPK 121 >gi|154151571|ref|YP_001405189.1| response regulator receiver protein [Candidatus Methanoregula boonei 6A8] gi|154000123|gb|ABS56546.1| response regulator receiver protein [Methanoregula boonei 6A8] Length = 387 Score = 43.2 bits (101), Expect = 0.043, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 3/86 (3%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 D + +++Y + + N+ A +YF + ++ P + VA + V Sbjct: 155 DTVKHKKETRKTLKDLYTYGLDHQAKGNYDAALQYFTEILKNNP-SDVAIWA--EKGDVL 211 Query: 105 YSAGKYQQAASLGEEYITQYPESKNV 130 Y GK + A + + P ++ Sbjct: 212 YKLGKSEDALCAVDTALGIEPANEYA 237 >gi|145253611|ref|XP_001398318.1| serine/threonine-protein phosphatase T [Aspergillus niger CBS 513.88] gi|134083887|emb|CAK48791.1| unnamed protein product [Aspergillus niger] Length = 479 Score = 43.2 bits (101), Expect = 0.043, Method: Composition-based stats. Identities = 16/149 (10%), Positives = 49/149 (32%), Gaps = 27/149 (18%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYSAG 108 D+ + + E + A +++++ + P + + ++ Sbjct: 4 PDLEAATALKVQGNKAFAEHEWPTAIDFYSRAIEKYDKEP-SFFSNRAQ-----AHIKLE 57 Query: 109 KYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y A + + + + +Y Y+ ++ + ++ K L+ ++ Sbjct: 58 AYGFAIADASKALEL-----DSNYVKAYWRRALANSAILN--------YKEALKDFKAVI 104 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 +R N+ A+ +T + E E Sbjct: 105 KREPNNR---DAKLKLTECEKLVRRLEFE 130 >gi|115374915|ref|ZP_01462187.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|310819227|ref|YP_003951585.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115368042|gb|EAU67005.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|309392299|gb|ADO69758.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 1091 Score = 43.2 bits (101), Expect = 0.043, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 17/47 (36%) Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 FP + + A Y G Y +AA L + +P K+ Sbjct: 507 TRFPQSPNVMEVRFNIARAYYEDGDYPKAAELFTAFALAHPNHKDAP 553 >gi|183221746|ref|YP_001839742.1| hemolysin [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911821|ref|YP_001963376.1| hypothetical protein LBF_2307 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|106879698|emb|CAJ90418.1| putative hemolysin precursor [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|167776497|gb|ABZ94798.1| Conserved hypothetical protein with tetratricopeptide repeat domain [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780168|gb|ABZ98466.1| Hemolysin; putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 389 Score = 43.2 bits (101), Expect = 0.043, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 47/149 (31%), Gaps = 19/149 (12%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D Y+ V++ A ++ + K+ E F + P ++L A + G Sbjct: 223 DEKVVGEYKDSVFKDAKESFTKKQYFKSIELFQKSLSVNPSPKKEEEALYYIALSYDALG 282 Query: 109 KYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 K ++ + + + N DY Y G Y + Q + Sbjct: 283 KQTESLTYINKVLN------NSDYSLDQASLYKKGTIYFR--------QGKFEKAAGIFQ 328 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAK 192 IV++Y + A + +Q Sbjct: 329 TIVDKYPKNQITDKAIAWKKESLDQFTDH 357 Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 55/135 (40%), Gaps = 23/135 (17%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++ +Y ++ L ++ ++ P K + Y + +SY + + L Y+++ Sbjct: 242 FTKKQYFKSIELFQKSLSVNPSPKKEEEALYYIALSYDALGKQT--------ESLTYINK 293 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 ++ NS Y + L K G Y ++G++ A FQ ++ Y + Sbjct: 294 VLN---NSDYSLD--------QASLYKK----GTIYFRQGKFEKAAGIFQTIVDKYPKNQ 338 Query: 225 HAEEAMARLVEAYVA 239 ++A+A E+ Sbjct: 339 ITDKAIAWKKESLDQ 353 >gi|330814392|ref|YP_004358631.1| TPR repeat containing exported protein; Putative periplasmic protein contains a protein prenylyltransferase domain [Candidatus Pelagibacter sp. IMCC9063] gi|327487487|gb|AEA81892.1| TPR repeat containing exported protein; Putative periplasmic protein contains a protein prenylyltransferase domain [Candidatus Pelagibacter sp. IMCC9063] Length = 320 Score = 43.2 bits (101), Expect = 0.043, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 8/88 (9%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 G YQ+A +E+I + P Y ++ IR + +D Y+ Sbjct: 205 KVGDYQKAEIALKEFIEKNPTHSLSGSAQYWFAETFY--IRQLYHD-----AAAAYLDGY 257 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKE 193 +++ S + + N+L K+ Sbjct: 258 -QKFPKSKKAPQNLLKLGIVMNELGEKD 284 >gi|193215626|ref|YP_001996825.1| tetratricopeptide domain-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193089103|gb|ACF14378.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium ATCC 35110] Length = 2169 Score = 43.2 bits (101), Expect = 0.043, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 72/211 (34%), Gaps = 37/211 (17%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFN--QCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 +R +Y KA+ E+ + A E + + + K Y + Sbjct: 136 IRQADLLYNKAIEEFDEKYLAYANESLKYAEILDKYDKGETSEKPT-EPIEPDYG---FD 191 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + +L + I PES V YY Y + + + + I +Y + Sbjct: 192 KVITLYDLIINNMPESPYVVDAYYGKAYIYGENLNKKD-------DAVAILREITRKYPD 244 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYL------KRGEYVAAIPRFQLVLANYS---- 221 S Y + + I Y + + + +IP ++ VL S Sbjct: 245 SRYTIDSY--------------MLIAEYLFGAPSRQQPRKTIESIPYYKKVLDLVSSKGI 290 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSL 252 +++ ++++ +L AY + +D+ ++ Sbjct: 291 TSKYYDQSLYKLGWAYFRIGGIDKKNYEEAI 321 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 57/173 (32%), Gaps = 44/173 (25%) Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 ++ +GE++I +PESK + D+ + ++ +E + + Sbjct: 113 KSIEVGEKFIKVFPESKVI--------------------DEIVIRQADLLYNKAIEEF-D 151 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE-------------YVAAIPRFQLVLA 218 Y+ A + EI Y K + I + L++ Sbjct: 152 EKYLAYANESLKYA---------EILDKYDKGETSEKPTEPIEPDYGFDKVITLYDLIIN 202 Query: 219 NYSDAEHAEEAMARLVEAY-VALALMDEAREVVSLIQERYPQGYWARYVETLV 270 N ++ + +A Y L D+A ++ I +YP + L+ Sbjct: 203 NMPESPYVVDAYYGKAYIYGENLNKKDDAVAILREITRKYPDSRYTIDSYMLI 255 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 31/86 (36%) Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + ++ + YY KR Y+AA +++ + + A +A + YV Sbjct: 762 KKRRDFAYKRIGESISQQAEYYKKRENYIAAARQYERAARTVPEWKDANQAAVLASDNYV 821 Query: 239 ALALMDEAREVVSLIQERYPQGYWAR 264 ++A + + + + + Sbjct: 822 LGGRTEDAVRINNYLINKASDDPSYK 847 >gi|116625694|ref|YP_827850.1| hypothetical protein Acid_6643 [Candidatus Solibacter usitatus Ellin6076] gi|116228856|gb|ABJ87565.1| conserved hypothetical protein [Candidatus Solibacter usitatus Ellin6076] Length = 133 Score = 43.2 bits (101), Expect = 0.043, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 A KE+ G YY K+G Y AA RF+ EA RL EA L Sbjct: 52 AQKEIRTGNYYFKKGAYRAAAGRFEEATKWNDG---EPEAWLRLGEAEEKLKDP 102 >gi|298206626|ref|YP_003714805.1| TPR-domain containing protein [Croceibacter atlanticus HTCC2559] gi|83849256|gb|EAP87124.1| TPR-domain containing protein [Croceibacter atlanticus HTCC2559] Length = 1006 Score = 43.2 bits (101), Expect = 0.043, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 79/241 (32%), Gaps = 23/241 (9%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + D V YQ+ + + + E N+++A YF + + A ++ +A Sbjct: 413 ESSRDFDNKVAYQKVAFYRGIELYNEDNYTEAKTYFEKSLSEPRDASFTARATYWNAETD 472 Query: 105 YSAGKYQQAASLGEEYITQYPESK---------NVDYVY-----YLVGMSYAQMIRDVPY 150 Y+ +Q A +E+ S+ N+ Y Y Y +SY + + Sbjct: 473 YNLNNFQDALIGYKEFQGMSAASQTEAYKNLDYNLGYAYFKQKDYEQAISYFKKYSETSS 532 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-----YLKRGE 205 D K + + S Y Y L K + + Y + Sbjct: 533 DTSRKKDAFLRLGD--TYFVTSKYWPAMESYNDAI--ALGGKSADYAAFQKAISYGFVNK 588 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 I L +S + + ++A+ L YVA+ E + + + P+ + Sbjct: 589 NDRKIEDLTSFLNQFSRSTYRDDALYELGNTYVAIGNTQEGIKAYNRLIRDVPKSSYVSK 648 Query: 266 V 266 Sbjct: 649 A 649 Score = 42.4 bits (99), Expect = 0.069, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 56/188 (29%), Gaps = 25/188 (13%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + N+++A Y + Y G++ A S + + Sbjct: 251 GESYFNLGNYAEAVPYLK--EYRGTRGKWNNTDYYQLGYAYYKQGEFDNAISEFNKIVDG 308 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 ++ YY + SY ++ DQ+ + L S Sbjct: 309 --KNAVAQNAYYHLAESYLKL------DQK--QQALNAFKN------ASEMEFDNAIKKD 352 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 N A EIG Y + + R+ L Y D E L+++Y+ Sbjct: 353 ALLNY-AKLSYEIGNSYESTPK---VLTRY---LETYPDTAEKTELQNLLIDSYITSKNY 405 Query: 244 DEAREVVS 251 EA E++ Sbjct: 406 AEAMELLE 413 Score = 42.4 bits (99), Expect = 0.076, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 73/219 (33%), Gaps = 33/219 (15%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 L + ++ + + + ++L++ N+ A + + F + Sbjct: 782 KFVLTKERNEFTEQSLAQLSQIYLEKSNYKDAIPVLKRLETEADFPQNIVFAQSNLMKSY 841 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVD-----YVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y Y+QA S E + + ++D + ++ S + D+ K Sbjct: 842 YQQDNYEQAVSYAENVL----ANSSIDTKVKNDAHIIIARSAMK-----TGDEAKAKTAY 892 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 V++ A +Y +N K G Y A+ Q + Sbjct: 893 AT----VQKTATGKLAAEALYYDAYFKN--------------KAGNYKASNESVQTLAKE 934 Query: 220 YSDA-EHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 YS E++ +++ + + + AL +A ++ I + Sbjct: 935 YSGYKEYSVKSLLVMAKNFYALEDAYQATYILENIINNF 973 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 82/236 (34%), Gaps = 48/236 (20%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +YE ++ N + + +N+ RD P + K+LL + Y++ + +A Sbjct: 610 DDALYELGNTYVAIGNTQEGIKAYNRLIRDVPKSSYVSKALLKQGLIYYNSDRGNEALEK 669 Query: 117 GEEYITQYPESKNVD------------------YVYYLVGMSYAQMIRDVPYD------- 151 ++ +P + D Y ++ + + + D D Sbjct: 670 FKKVAADFPGTAQADQAVKTARLIYVDLGRTSEYANWVKTLDFVN-VTDADLDNTTYEAA 728 Query: 152 -----QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 Q L+ +E + N + + FY+ + + KE I Y Sbjct: 729 EQQYRQENANAALRGFENYLEEFPNGLHALQSHFYLAQLQFKDNKKEESISHY------- 781 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI--QERYPQG 260 + VL E E+++A+L + Y+ + +A V+ + + +PQ Sbjct: 782 -------KFVLTK-ERNEFTEQSLAQLSQIYLEKSNYKDAIPVLKRLETEADFPQN 829 Score = 35.5 bits (81), Expect = 7.2, Method: Composition-based stats. Identities = 24/192 (12%), Positives = 46/192 (23%), Gaps = 31/192 (16%) Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 E F + +L + G Q+ I P+S V Sbjct: 593 IEDLTSFLNQFSRSTYRDDALYELGNTYVAIGNTQEGIKAYNRLIRDVPKSSYVSKALLK 652 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--- 193 G+ Y R L+ ++ + + A + L Sbjct: 653 QGLIYYNSDRG--------NEALEKFKKVAADFPGTAQADQAVKTARLIYVDLGRTSEYA 704 Query: 194 --------------------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 E ++ AA+ F+ L + + HA ++ L Sbjct: 705 NWVKTLDFVNVTDADLDNTTYEAAEQQYRQENANAALRGFENYLEEFPNGLHALQSHFYL 764 Query: 234 VEAYVALALMDE 245 + +E Sbjct: 765 AQLQFKDNKKEE 776 >gi|78062900|ref|YP_372808.1| TPR repeat-containing protein [Burkholderia sp. 383] gi|77970785|gb|ABB12164.1| TPR repeat protein [Burkholderia sp. 383] Length = 292 Score = 43.2 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 46/158 (29%), Gaps = 22/158 (13%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 FAL + G + + S Q E+ A L N A + Sbjct: 9 FALAAVLPV---LAGGCGAPGIQTRPVLSHKSDDPQAEL-RIADSALAGGNVDLASTLYE 64 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE--SKNVDYVYYLVGM 139 + P + AR L V Y AG ++A L +E Q P +G+ Sbjct: 65 KVLAKHPDSLAAR---LGLGDVNYRAGDLERARILYDEAQRQAPAELGP-------RLGL 114 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + V QR Q ++ N P Sbjct: 115 A------RVALRQRRLDEAAQRYRDLLAAQPNHPLAAE 146 >gi|328874887|gb|EGG23252.1| SET domain-containing protein [Dictyostelium fasciculatum] Length = 909 Score = 43.2 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 40/133 (30%), Gaps = 12/133 (9%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 RY E Y KA ++ + +A E + P+ + L A V + Y++A Sbjct: 117 RYLEEAYSKAAEEYEKGEYQQALERYFWIINKVPYES---AAYLQRAVVYETIHSYEEAI 173 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 ++ I+ S + Y L G S + + Y + Sbjct: 174 QDCDKVISMSNSSDQIAEAYMLKGHSLMGRTK--------FSEAATAFKDSL-MYVENEE 224 Query: 175 VKGARFYVTVGRN 187 V + Sbjct: 225 VMELMKKALSLVD 237 >gi|162449758|ref|YP_001612125.1| hypothetical protein sce1487 [Sorangium cellulosum 'So ce 56'] gi|161160340|emb|CAN91645.1| putative membrane protein [Sorangium cellulosum 'So ce 56'] Length = 298 Score = 43.2 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 45/137 (32%), Gaps = 10/137 (7%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + +++ +A + +A E + R F + A SL+ + G Sbjct: 169 APPTASTAEQLFREANDARRAGRSRRAIELYRALQRGFASSPEATLSLVSLGGLLLHDGS 228 Query: 110 YQQAASLGEEYITQY-PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 A + + Y+ P Y G + +R + Q R++ Sbjct: 229 PAAALAQFDRYLGVAGPR-PLAVEALYGRG----RALRALGR----AGDEAQAWRRLLRE 279 Query: 169 YTNSPYVKGARFYVTVG 185 + SPYV+ AR + Sbjct: 280 HPGSPYVEHARRRLAEL 296 >gi|241952765|ref|XP_002419104.1| serine/threonine-protein phosphatase T, putative [Candida dubliniensis CD36] gi|223642444|emb|CAX42689.1| serine/threonine-protein phosphatase T, putative [Candida dubliniensis CD36] Length = 553 Score = 43.2 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 46/160 (28%), Gaps = 51/160 (31%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ---CSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +K LK+ + +A E + + + F + ++ + Y A Sbjct: 13 DKGNNLLKQHKYDEAIEAYTKAIEIDSENAIF--YSNRAQVQI-----KLENYGLAIQDC 65 Query: 118 E-------EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + ++ YY G+S +++ K L+ I+++ Sbjct: 66 DLAIKLDNNFLK----------AYYRKGVSLMAILKH--------KQALENFKFILKKLP 107 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 N N YLKR + AI Sbjct: 108 NDKLTLENYK---QCTN------------YLKRQAFEKAI 132 >gi|255574548|ref|XP_002528185.1| fk506 binding protein, putative [Ricinus communis] gi|223532397|gb|EEF34192.1| fk506 binding protein, putative [Ricinus communis] Length = 618 Score = 43.2 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 43/153 (28%), Gaps = 25/153 (16%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF----PFAGVARKSL------ 97 +D T + ++ KE F A + + R+F P K Sbjct: 388 MDFPTIMGEAEKIRNTGNRLYKEGKFELAKAKYEKVLREFNHVNPQDDEEGKVFVDTRNL 447 Query: 98 --LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 L A G+ +++ + + P Y GM+Y Sbjct: 448 LNLNLAACYLKMGECKKSIEYCNKVLDANPAHAK---ALYRRGMAYMTD--------GDF 496 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + +++ +S A + + + Sbjct: 497 EEARRDFEMMMKGDKSSE--ADAMAALQKLKQK 527 >gi|206891167|ref|YP_002249681.1| hypothetical protein THEYE_A1891 [Thermodesulfovibrio yellowstonii DSM 11347] gi|206743105|gb|ACI22162.1| hypothetical protein THEYE_A1891 [Thermodesulfovibrio yellowstonii DSM 11347] Length = 349 Score = 43.2 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 32/68 (47%) Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 AA+ + L+L Y + E ++ L L +A++ + ++ YP+G + Sbjct: 276 RNPEAALAEYLLILEEYPEIPQKETSLYLTGMTLYELGLKKQAKQRLYQYKKTYPEGKYI 335 Query: 264 RYVETLVK 271 VET+++ Sbjct: 336 TNVETIIR 343 >gi|119512967|ref|ZP_01632028.1| serine/threonine kinase [Nodularia spumigena CCY9414] gi|119462380|gb|EAW43356.1| serine/threonine kinase [Nodularia spumigena CCY9414] Length = 713 Score = 43.2 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 65/197 (32%), Gaps = 20/197 (10%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y F A + +++ + P + +S ++ +Y QA + Sbjct: 516 YSLGNALFNLNRFDNALKAYDKAVQYRPKFYPAWFSRSNILII-----LRRYPQAIESFD 570 Query: 119 EYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY--TNSPYV 175 + I P DY +Y G + Q R K + Y NS Y+ Sbjct: 571 QAIKHNPN----DYQAWYSRGWALHQSQRYEEAIASYNKAAAIKRNDYQIWYNLGNSQYI 626 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 ++ + + RG + + R++ + +Y ++A+ Sbjct: 627 LQKYQQAIASYDKAVRYQTNHAESWYSRGNALLNLQRYKEAIDSY------DQAIKYKPN 680 Query: 236 AYVALALMDEAREVVSL 252 A+ +EA++ +S+ Sbjct: 681 YRQAINARNEAQKELSV 697 >gi|94501765|ref|ZP_01308278.1| hypothetical protein RED65_07514 [Oceanobacter sp. RED65] gi|94426073|gb|EAT11068.1| hypothetical protein RED65_07514 [Oceanobacter sp. RED65] Length = 947 Score = 43.2 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 61/193 (31%), Gaps = 23/193 (11%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 + L +++F KA +Y+ FP + L A + G++ QAA + ++ Sbjct: 391 LKELADKSFDKATQYYGNFVAVFPQDKKVPEMLYQKADAHFEYGEFDQAAKDYYQVAYRH 450 Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL-------MLQYMSRIVERYTNSPYVKG 177 K Y ++Y + I + + K + M R + Y N Sbjct: 451 KGYKKSSEAAYASIIAYRKHIDGLELAEADVKTLDKWRAGSVDAMLRFAQVYPNDKRAVA 510 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA--EHAEEAMARLVE 235 +Y + Y AI +L N + + EA L Sbjct: 511 VLS--------------NAAQYLFELKAYDRAIEVANGLLENKKRSGRDIQREAYGILAH 556 Query: 236 AYVALALMDEARE 248 +Y L A+ Sbjct: 557 SYFQLGQYQLAQN 569 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 5/59 (8%) Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 Y +R AI + +L Y ++ E + +L +AY AR+++ + +R+P Sbjct: 97 YYRR-----AIASYVDILEKYPNSPDNAEVLYQLAKAYDMEGQPKNARKMLERLVDRHP 150 Score = 40.1 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 28/77 (36%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 + + +A + +P + + L A G+ + A + E + ++P + Sbjct: 94 EAGYYRRAIASYVDILEKYPNSPDNAEVLYQLAKAYDMEGQPKNARKMLERLVDRHPYYE 153 Query: 129 NVDYVYYLVGMSYAQMI 145 + Y+ +G Y Sbjct: 154 RISEAYFRLGDIYFSSD 170 >gi|226467007|emb|CAX75984.1| hypothetical protein [Schistosoma japonicum] Length = 431 Score = 43.2 bits (101), Expect = 0.045, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 51/151 (33%), Gaps = 26/151 (17%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF----AGVARK--------SLL 98 + Y + EKA FLK+ F A E + + + + +K L Sbjct: 253 PERIAYANTLKEKANNFLKDSKFDSAIELYKRLDDELQYVVANGPTEQKELSGVTVAVQL 312 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A V K + ++ + + +++ + +G ++ + + Sbjct: 313 NLALVYLKLCKPDKCIEFCKKVLDNFSDNEK---ALFRIGQAHLLR--------KDHEEA 361 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + Y RIV + N+ A V + ++ Sbjct: 362 VVYFKRIVTKNPNN---ASAVKQVQICEEEI 389 >gi|226467003|emb|CAX75982.1| hypothetical protein [Schistosoma japonicum] Length = 431 Score = 43.2 bits (101), Expect = 0.045, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 51/151 (33%), Gaps = 26/151 (17%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF----AGVARK--------SLL 98 + Y + EKA FLK+ F A E + + + + +K L Sbjct: 253 PERIAYANTLKEKANNFLKDSKFDSAIELYKRLDDELQYVVANGPTEQKELSGVTVAVQL 312 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A V K + ++ + + +++ + +G ++ + + Sbjct: 313 NLALVYLKLCKPDKCIEFCKKVLDNFSDNEK---ALFRIGQAHLLR--------KDHEEA 361 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + Y RIV + N+ A V + ++ Sbjct: 362 VVYFKRIVTKNPNN---ASAVKQVQICEEEI 389 >gi|56757962|gb|AAW27121.1| SJCHGC01391 protein [Schistosoma japonicum] gi|226471568|emb|CAX70865.1| hypothetical protein [Schistosoma japonicum] Length = 431 Score = 43.2 bits (101), Expect = 0.045, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 51/151 (33%), Gaps = 26/151 (17%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF----AGVARK--------SLL 98 + Y + EKA FLK+ F A E + + + + +K L Sbjct: 253 PERIAYANTLKEKANNFLKDSKFDSAIELYKRLDDELQYVVANGPTEQKELSGVTVAVQL 312 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A V K + ++ + + +++ + +G ++ + + Sbjct: 313 NLALVYLKLCKPDKCIEFCKKVLDNFSDNEK---ALFRIGQAHLLR--------KDHEEA 361 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + Y RIV + N+ A V + ++ Sbjct: 362 VVYFKRIVTKNPNN---ASAVKQVQICEEEI 389 >gi|33862568|ref|NP_894128.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT 9313] gi|33640681|emb|CAE20470.1| TPR repeat [Prochlorococcus marinus str. MIT 9313] Length = 727 Score = 43.2 bits (101), Expect = 0.045, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 26/85 (30%), Gaps = 18/85 (21%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SA 107 + E+ E L+ ++F A + FN+ P+ A Y Sbjct: 53 KSADELMESGKSKLENKDFHGAIDDFNKLLDSHPYN----------ADSYYNRGLAKAKL 102 Query: 108 GKYQQAASLGEEYITQYPESKNVDY 132 G Q A + I P + Y Sbjct: 103 GNNQGAIEDYSKAIEINPLH-AIAY 126 >gi|327485391|gb|AEA79797.1| TPR domain protein in aerotolerance operon [Vibrio cholerae LMA3894-4] Length = 612 Score = 42.8 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 10/115 (8%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 F+L + F +++ W S + D + E Y +A ++ + A Y+ Sbjct: 323 FSLLLLFGVSLPNQQAWA---SAWLNQDQQAMHMFNNEQYAQAAEAFRDPRWQGAARYYA 379 Query: 82 QCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + ++ + A AG+ Q+A L E+ + Q P ++ Sbjct: 380 K-DYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLYEQVLKQEPNHQDA 433 >gi|302840537|ref|XP_002951824.1| hypothetical protein VOLCADRAFT_81612 [Volvox carteri f. nagariensis] gi|300263072|gb|EFJ47275.1| hypothetical protein VOLCADRAFT_81612 [Volvox carteri f. nagariensis] Length = 650 Score = 42.8 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 8/87 (9%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAG 108 + D +Y + +Y +K+Q F++A + Q +R +L + + Y G Sbjct: 10 PIADGQYTQVIY----TLIKDQKFTEAISHLQYQLQARGNI-PESRAALSLLGYCYYYTG 64 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYY 135 +Y A+ + E+ +T YP ++ DY Y Sbjct: 65 QYDLASQMYEQLVTLYPNNE--DYKLY 89 >gi|297277414|ref|XP_002801351.1| PREDICTED: serine/threonine-protein phosphatase 5 [Macaca mulatta] Length = 486 Score = 42.8 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 45/141 (31%), Gaps = 30/141 (21%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + E+ +A + K +++ A ++++Q P + + Y+ G +A Sbjct: 26 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS---------NAIYYGYALGDATRAI 76 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 L ++YI YY S + + L+ +V+ + Sbjct: 77 ELDKKYIK----------GYYRRAASNMAL--------GKFRAALRDYETVVKVKPHDK- 117 Query: 175 VKGARFYVTVGRNQLAAKEVE 195 A+ + K E Sbjct: 118 --DAKMKYQECNKIVKQKAFE 136 >gi|256082557|ref|XP_002577521.1| heat shock protein 70 [Schistosoma mansoni] gi|238662843|emb|CAZ33759.1| heat shock protein 70 (hsp70)-interacting protein, putative [Schistosoma mansoni] Length = 356 Score = 42.8 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 46/137 (33%), Gaps = 25/137 (18%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +A+ + + + + A + F + + P + AR++ K A + ++ Sbjct: 107 EAMAKMSDGDLTGAVDLFTEAIKLNPQSSLFHARRAS-----CFVRMKKPSHAIADCDKA 161 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I+ P+S Y + G + +MI + Q + ++ Y A Sbjct: 162 ISLNPDSAQ-PYKW--RGFAN-KMI-------GNWEAAYQDLQTSLKL----DYTDDANE 206 Query: 181 YVTVG---RNQLAAKEV 194 + ++ + Sbjct: 207 AIKEIEPKHKRIFEHNM 223 >gi|154492257|ref|ZP_02031883.1| hypothetical protein PARMER_01891 [Parabacteroides merdae ATCC 43184] gi|154087482|gb|EDN86527.1| hypothetical protein PARMER_01891 [Parabacteroides merdae ATCC 43184] Length = 269 Score = 42.8 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 10/69 (14%), Positives = 22/69 (31%), Gaps = 3/69 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A + ++++ KA E + + A Y K A E + Sbjct: 45 KEAEVAYTKEDYGKAIELYEGLLKTH--GESAE-IYYNLGNAYYKENKIAPAILNYERAL 101 Query: 122 TQYPESKNV 130 P ++ Sbjct: 102 LLDPGDGDI 110 >gi|145473661|ref|XP_001462494.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124430334|emb|CAK95121.1| unnamed protein product [Paramecium tetraurelia] Length = 369 Score = 42.8 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 17/151 (11%), Positives = 54/151 (35%), Gaps = 39/151 (25%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-----------------KSLLMS 100 +++ +A KEQ + +A + + + + + + L Sbjct: 170 KQLKSQATQLFKEQKYKEAIQVYKNI-----HSKIGQIPKALKNTMTQEQKTFFQVELSR 224 Query: 101 AF-----VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + +Y +A ++ + + ++ Y++ ++ + DQ++ Sbjct: 225 VYSNQAICHLQLKEYAKAIETSKQAMNDWDQNFK---AYFIYAKAHFE------RDQKS- 274 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 L+Y +I++++ N V + Y+ + Sbjct: 275 -EALEYFQQIIQKFPN-EDVTEVQKYLDKCK 303 >gi|288925073|ref|ZP_06419009.1| TPR domain protein [Prevotella buccae D17] gi|288338263|gb|EFC76613.1| TPR domain protein [Prevotella buccae D17] Length = 269 Score = 42.8 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 47/128 (36%), Gaps = 15/128 (11%) Query: 72 NFSKAYEYFNQ-CSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESK 128 N+++A +Y ++ + F+ +S +A + G+Y +A L E+ + E++ Sbjct: 94 NYAEAIQYLDKAIPQLSAFSPH-ERSFYYWSNAESHFLLGRYDEAIPLYEKMLNLCYENE 152 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 D +Y +G + + + Y + Y + + N Sbjct: 153 KAD-AFYRLGFCHMFA--------EDWQKACDNYKQAAHYY--TYYRPEEQARLVQINNM 201 Query: 189 LAAKEVEI 196 +A E I Sbjct: 202 IAGCEKHI 209 >gi|254424837|ref|ZP_05038555.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC 7335] gi|196192326|gb|EDX87290.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC 7335] Length = 981 Score = 42.8 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 81/252 (32%), Gaps = 25/252 (9%) Query: 16 AYQLYKFALTIFFSIAVC--FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73 L K LT+ S A + W + + ++ + + Sbjct: 1 MTSLSKPLLTLLASSASVSMLTILWATSWTTSTIARPIEEIHILQ---NQPEASHSSNRE 57 Query: 74 SKAYEYFNQCSRDFPFAGV--ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 S+A F Q D+ +R+ +A + Y G Y + A+ S++ Sbjct: 58 SEAERLFQQGEADYQIGAYQDSRQHWTQAAAIYYEVGNYARLATTFNRIAASLQASEHYP 117 Query: 132 YV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 YY G AQ + D+ A + + + +Y + A L Sbjct: 118 MALEYYQQGFVTAQHVDDLQESVTAL-DGVGTIHTLQHQY---EEAQDALELSLAISRSL 173 Query: 190 AAKEVEI------GRYYLKRGEYVAAIPRFQLVLA------NYSDAEHAEEAMARLVEAY 237 A+E+E G Y RG Y AI +Q L S++ +A+ L A+ Sbjct: 174 GAQEMEAQTLLILGSVYSDRGHYDQAIELYQQSLDIVQSIGEVSESSVEPQALTLLGAAF 233 Query: 238 VALALMDEAREV 249 D+A Sbjct: 234 GDKGDYDKAMSY 245 >gi|17230316|ref|NP_486864.1| hypothetical protein alr2824 [Nostoc sp. PCC 7120] gi|17131918|dbj|BAB74523.1| alr2824 [Nostoc sp. PCC 7120] Length = 732 Score = 42.8 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 17/135 (12%), Positives = 46/135 (34%), Gaps = 11/135 (8%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E Y++ + +++ +A + F ++ + A + L+ +Y+ Y+ A + Sbjct: 456 EYYKQGHAAYQVRDYKQAVDNFTHAIQQE---SANA-RVLVNRGNARYNLKDYEGALADY 511 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P + G S + + +L + + ++ + Sbjct: 512 TAALQINPREIK---AFVNRGNSRLMLAEYSNDPDQQYRLAITDFNHALKL---NEKEAE 565 Query: 178 ARFYVTVGRNQLAAK 192 A + R Q+A Sbjct: 566 AYIRRGIVRTQMAKY 580 >gi|268325019|emb|CBH38607.1| conserved hypothetical protein, containing tetratricopeptide repeats [uncultured archaeon] Length = 425 Score = 42.8 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 41/113 (36%), Gaps = 18/113 (15%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + + + + +A E FN+ P + A +Y++A + I Sbjct: 274 NRGLTYNNLKQYERAIEDFNKTIELDPNSAAAYN---NRGNAYRKLEEYERAIEDFNKTI 330 Query: 122 TQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + +Y YY G++Y D + + ++ ++ +E NS Sbjct: 331 EL-----DSNYAGSYYNRGLTYD--------DLKQYERAIEDFNKTIELDPNS 370 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 57/175 (32%), Gaps = 30/175 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + + + + +A E FN+ P + A + +Y++A + I Sbjct: 206 NRGLTYDNLKQYERAIEDFNKTIELDPNSAAAYN---NRGLTYDNLKQYERAIEDFNKTI 262 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P + Y G++Y + + + ++ ++ +E NS A Sbjct: 263 ELIPNHT---FAYNNRGLTYNNL--------KQYERAIEDFNKTIELDPNS---AAAYNN 308 Query: 182 VTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYSDA 223 +L E I + Y RG + +++ + +++ Sbjct: 309 RGNAYRKLEEYERAIEDFNKTIELDSNYAGSYYNRGLTYDDLKQYERAIEDFNKT 363 >gi|261212660|ref|ZP_05926944.1| TPR domain protein in aerotolerance operon [Vibrio sp. RC341] gi|260837725|gb|EEX64402.1| TPR domain protein in aerotolerance operon [Vibrio sp. RC341] Length = 628 Score = 42.8 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 43/120 (35%), Gaps = 11/120 (9%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + I E +S + D ++ + Y +A ++ + A Sbjct: 316 FRRGVIFTLLLIVGTHFPVQEASASPWLNQDQQAMRAFEAKQYSQAAETFRDPKWQGAAR 375 Query: 79 YFNQCSRDFPFA--GVAR------KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 Y+ + D+P A +R ++ A AG + +A L E+ + Q P ++ Sbjct: 376 YYAK---DYPGAIEAYSRIENPDLETQYNLANAYAQAGNFPKARELYEQVLKQQPNHQDA 432 >gi|226227016|ref|YP_002761122.1| hypothetical protein GAU_1610 [Gemmatimonas aurantiaca T-27] gi|226090207|dbj|BAH38652.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 220 Score = 42.8 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 1/66 (1%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + +Y +A + F +A + + + + +++ ++ A V Y KY + Sbjct: 59 EKASAALY-EAQAPFAQGKFDEAQKALEKVTNQYASTSSGQQAAVLLAQVLYEQKKYDEG 117 Query: 114 ASLGEE 119 E+ Sbjct: 118 IKALEK 123 >gi|114648903|ref|XP_001147579.1| PREDICTED: intraflagellar transport 88 homolog isoform 2 [Pan troglodytes] Length = 680 Score = 42.8 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 85/303 (28%), Gaps = 64/303 (21%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 321 QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 380 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 381 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 433 Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157 ++ + +N V Y + Y Q++ +P D + Sbjct: 434 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 493 Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196 QY + ++ + + A Y + + ++ + Sbjct: 494 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 553 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSL 252 + + G Q L Y D E + LV L L D A+E Sbjct: 554 ASCFRRSGN-------SQKALDTYKDTHRKFPENVECLRFLVRLCTDLGLKD-AQEYARK 605 Query: 253 IQE 255 ++ Sbjct: 606 LKR 608 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KAV +L+++++++A E + + V + + + Y + QA+S Sbjct: 313 NKAVTYLRQKDYNQAVEILKVLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 370 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 371 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 426 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y Sbjct: 427 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 462 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AI V++ +++L E Y +A + Sbjct: 463 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 501 >gi|78224245|ref|YP_385992.1| peptidase S1C, HrtA/DegP2/Q/S [Geobacter metallireducens GS-15] gi|78195500|gb|ABB33267.1| Peptidase S1C, HrtA/DegP2/Q/S [Geobacter metallireducens GS-15] Length = 772 Score = 42.8 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 16/78 (20%) Query: 71 QNFSKAYEYFNQCSRDFP----FAGVARKSLLMSAFVQY-SAGKYQQAASLGEEYITQYP 125 + + A + + P F ++ Y Y++A + I P Sbjct: 540 KKYDDAVRIYTDLIKQHPKRLIF--YNGRAE------YYAKLKNYKKAIADYTTCIKLNP 591 Query: 126 ESKNVDYVYYLVGMSYAQ 143 S+ Y Y L Y + Sbjct: 592 NSE---YNYNLRANCYYE 606 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 23/200 (11%), Positives = 57/200 (28%), Gaps = 50/200 (25%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKS--LLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 N KA + + + P +K+ + + + + ++ ++ P +++ Sbjct: 439 NADKAIKLYETAIQLNP-----KKADYYVEKGWQHKIKNDFSKVLDCAKKALSISPNNED 493 Query: 130 VDYVY----------------YLVGMS-------YAQMIRDVPYDQRATKLMLQYMSRIV 166 Y+Y Y G+S I V + ++ + ++ Sbjct: 494 AHYLYGSYYEENNKYDKALEYYTKGLSVSDNVTFGYFYIDGVMEKTKKYDDAVRIYTDLI 553 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 +++ + + YY K Y AI + + ++E+ Sbjct: 554 KQHP---------KRLIFYNGR--------AEYYAKLKNYKKAIADYTTCIKLNPNSEYN 596 Query: 227 EEAMARLVEAYVALALMDEA 246 Y EA Sbjct: 597 Y---NLRANCYYEDGKKSEA 613 >gi|85716150|ref|ZP_01047125.1| hypothetical protein NB311A_05590 [Nitrobacter sp. Nb-311A] gi|85696983|gb|EAQ34866.1| hypothetical protein NB311A_05590 [Nitrobacter sp. Nb-311A] Length = 447 Score = 42.8 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 23/170 (13%), Positives = 53/170 (31%), Gaps = 33/170 (19%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 S+ + +++ ++ ++ Y+ + +N S F Sbjct: 11 SVLLTMTACCSGAAAQSTTSSPISAASAVQQDYDALFQQM-YKNPSD-------LEVSF- 61 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 A +++ G Y+ A E + P N+ V +G+ Y ++ Sbjct: 62 --KFAEQAV--------KRGDYEAAIGALERMLFFNP---NLPRVKLELGVLYFKL---- 104 Query: 149 PYDQRATKLMLQYMSRIVE--RYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 + +L Y ++ + R Y+T +LA E + Sbjct: 105 ----GSYELARSYFQEAIKAADAPDDIRA-QVRAYLTEIDRRLARYEFSV 149 >gi|312114027|ref|YP_004011623.1| peptidase C14 caspase catalytic subunit p20 [Rhodomicrobium vannielii ATCC 17100] gi|311219156|gb|ADP70524.1| peptidase C14 caspase catalytic subunit p20 [Rhodomicrobium vannielii ATCC 17100] Length = 515 Score = 42.8 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 58/193 (30%), Gaps = 31/193 (16%) Query: 69 KEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 ++ + A ++ R P ++ ++ + + +A + E I Y Sbjct: 66 DDKKYDLAIADYSNAIRLAPKDYSAYYQR-----GYAYAMKEERDRAIADYSEAIRIYST 120 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + + YY G+ Y +M D+ + R+ + +N Sbjct: 121 NNGI---YYRRGIVYKEM-GDLDRALADLNEAI----RLEQDSSNYTERAEIYAKKGELD 172 Query: 187 NQLAAKEVEI-------------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 +A I G Y KRG+ AI F V++ + A Sbjct: 173 RAIADYSEAIRLNPKYDNLYKWRGEIYEKRGDLDHAIADFSKVISLDPKYDSYYRAR--- 229 Query: 234 VEAYVALALMDEA 246 + Y D A Sbjct: 230 GDIYEKKGDYDRA 242 Score = 35.5 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 23/173 (13%), Positives = 53/173 (30%), Gaps = 34/173 (19%) Query: 60 VYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y + +++ + + +A + + ++ + G+ +A + Sbjct: 125 YYRRGIVYKEMGDLDRALADLNEAIRLEQDSSNYTERAE---IYA--KKGELDRAIADYS 179 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 E I P+ N+ Y G Y + + S+++ Y Sbjct: 180 EAIRLNPKYDNL---YKWRGEIYEKR--------GDLDHAIADFSKVISLDP--KYDSYY 226 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 R G Y K+G+Y AI ++ + + A + +A Sbjct: 227 RAR---------------GDIYEKKGDYDRAIADYREAVRLDPNYSTARKRLA 264 >gi|303280501|ref|XP_003059543.1| predicted protein [Micromonas pusilla CCMP1545] gi|226459379|gb|EEH56675.1| predicted protein [Micromonas pusilla CCMP1545] Length = 1060 Score = 42.8 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 46/127 (36%), Gaps = 12/127 (9%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGEEYIT 122 LKE F A ++ P + + + L + Y G+Y +A E + Sbjct: 181 GNAALKEGRFEDALAIYDAAP---PPSEERKNRYLTNRSHALYELGRYDEAVDAARECTS 237 Query: 123 QYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 P DYV ++ +G + + + + A + ++ + R + ++K A Sbjct: 238 LDP-----DYVKGWFWLGKA-LEAVAIDSKNLEAARRAYNAFAQCLRRDPENVHLKEAAE 291 Query: 181 YVTVGRN 187 R+ Sbjct: 292 RTREFRD 298 >gi|195126359|ref|XP_002007638.1| GI13051 [Drosophila mojavensis] gi|193919247|gb|EDW18114.1| GI13051 [Drosophila mojavensis] Length = 1205 Score = 42.8 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 24/141 (17%) Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179 Y L+ + + RD +++ + L +++ + + + Sbjct: 600 AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRTDPRNIWATNGIGAVLAHK 659 Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 V R+ A +E + I Y+++ +Y++AI ++ + + + E Sbjct: 660 GCVIEARDIFAQVREATADFCDVWLNIAHIYVEQKQYISAIQMYENCMKKFFKHNNV-EV 718 Query: 230 MARLVEAYVALALMDEAREVV 250 M L AY+ + EA+ V+ Sbjct: 719 MQYLARAYLRANKLVEAKAVL 739 >gi|75906644|ref|YP_320940.1| hypothetical protein Ava_0419 [Anabaena variabilis ATCC 29413] gi|75700369|gb|ABA20045.1| TPR repeat protein [Anabaena variabilis ATCC 29413] Length = 224 Score = 42.8 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 42/126 (33%), Gaps = 11/126 (8%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 Y+ F L++ + Q V + +++ + E + +++ Sbjct: 1 MYKHISFVLSVLLLGGGTATIPTIAQGQVLVVQANNAELKR---LLEDGKRLVDAGDYNG 57 Query: 76 AYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A + Q + P R + + ++ G +Q A + I P + + Y Sbjct: 58 AIAVYQQAATMEP-----RNARIHSGIGYLHAQQGNFQAALASYRRAIAINPNNSDFFYA 112 Query: 134 Y-YLVG 138 Y+ G Sbjct: 113 VGYIKG 118 >gi|253700870|ref|YP_003022059.1| hypothetical protein GM21_2252 [Geobacter sp. M21] gi|251775720|gb|ACT18301.1| TPR repeat-containing protein [Geobacter sp. M21] Length = 188 Score = 42.8 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 47/154 (30%), Gaps = 34/154 (22%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + T + + L + + + +E VL E + +A E Sbjct: 1 MRQATGTYVMLLLMAGLATGDIDPKPQRQPIDQEEYLEAEDWFEAGVLMNSEGRYGEAAE 60 Query: 79 YF--------------------NQCSRDFPFA------GVARKSLLMSAFVQ-----YSA 107 F + D+P A +A L AF + Sbjct: 61 AFSKSIALSPGNAVSWLNLGTAQALTADYPHAIESLKRSIALDPELALAFSNLGEVCFRT 120 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 +Y++A +T +P + N Y +G+S+ Sbjct: 121 DRYEEAVEAYTSLLTLWPGNAN---ALYKLGLSH 151 >gi|171059547|ref|YP_001791896.1| hypothetical protein Lcho_2866 [Leptothrix cholodnii SP-6] gi|170776992|gb|ACB35131.1| conserved hypothetical protein [Leptothrix cholodnii SP-6] Length = 224 Score = 42.8 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 25/58 (43%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +Y++ + +A + F +P A ++ L++A VQ+ G+ A + Sbjct: 58 MYDEVERAVLAGEADRAAKVFADLKDRYPGTTFAEQAALLTAQVQFDKGQIDAAQATL 115 >gi|20093095|ref|NP_619170.1| TPR domain-containing protein [Methanosarcina acetivorans C2A] gi|19918428|gb|AAM07650.1| TPR-domain containing protein [Methanosarcina acetivorans C2A] Length = 1079 Score = 42.8 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 36/112 (32%), Gaps = 14/112 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + +F A ++Q P A F KYQ+A + ++ Sbjct: 850 MYRQGKALEAMGDFEAAIACYDQILALDPKNIDAIN---NKGFAYAKMEKYQEAIASYDK 906 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 I P + +Y G + + ++ ++ ++V + Sbjct: 907 AIEYAPNN---ATAWYFKGCANFAISSNI--------AAVESFDKVVTLKPD 947 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 40/106 (37%), Gaps = 16/106 (15%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGK 109 + Y + Y K K + A + F++ ++ A + AF G Sbjct: 466 NSEYAKVWYRKGYDSSKFGQYKDAAKSFDKAVNLDDNYTLAWYGK------AFALAKTGD 519 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 Y++A E+ + P+S + +Y G+ ++ + Q A+ Sbjct: 520 YEEALVCYEKVLAAAPDSAEI---WYNKGL----LLDQLERHQEAS 558 >gi|114321630|ref|YP_743313.1| peptidase M48, Ste24p [Alkalilimnicola ehrlichii MLHE-1] gi|114228024|gb|ABI57823.1| peptidase M48, Ste24p [Alkalilimnicola ehrlichii MLHE-1] Length = 500 Score = 42.8 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 63/171 (36%), Gaps = 23/171 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ ++++ F +A ++ D LL +Q +G QAA+ + Sbjct: 330 YGLALALIRDRQFDEAEALLSKLEADLSGQPAW----LLARGRLQQRSGDPAQAAATLRK 385 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +P ++ + D D Q ++R V + N P + Sbjct: 386 AQELFPGNRAAP-----------TYLADALLDAGQPNEARQVLTRAVRDHPNHP---ELK 431 Query: 180 FYVTVGRNQLAA---KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 + N+ + + RYY + G+ +A+ + + V ++ A++ + Sbjct: 432 RRLAEAANEAGRPVDAHLAMARYYHQLGDLNSALGQLREV-EHHPQADYYQ 481 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 10/74 (13%), Positives = 23/74 (31%), Gaps = 3/74 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 + + L + + ++A + FP A A AG+ +A + Sbjct: 360 PAWLLARGRLQQRSGDPAQAAATLRKAQELFPGNRAAPTY---LADALLDAGQPNEARQV 416 Query: 117 GEEYITQYPESKNV 130 + +P + Sbjct: 417 LTRAVRDHPNHPEL 430 >gi|113476762|ref|YP_722823.1| hypothetical protein Tery_3235 [Trichodesmium erythraeum IMS101] gi|110167810|gb|ABG52350.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101] Length = 734 Score = 42.8 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 16/119 (13%), Positives = 40/119 (33%), Gaps = 14/119 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 +V ++ ++A + +A + Q P A G + Sbjct: 4 EVMSAGQLLKQANQLKRAGRLDEAIALYYQVIEINPNFAWAYN---NLGDALVKQGNLDE 60 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + E + P S ++ Y +G + A+ Q + ++Y+ + ++ + Sbjct: 61 AVAYYFESLKLNPNS---AWLLYGLGEALAK--------QGNLEAAIEYLQKAIKTKPD 108 >gi|327259895|ref|XP_003214771.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein CTR9 homolog [Anolis carolinensis] Length = 1244 Score = 42.8 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 98/276 (35%), Gaps = 39/276 (14%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 A L RA E + ++T +++A + E + +Y + + + + Y Sbjct: 541 ASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYL 600 Query: 63 K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + + NF +A ++F + ++D P + L A ++ E Sbjct: 601 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 654 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSPY 174 + Q P ++N Y +G + Q + D+ R L +++ + Y Sbjct: 655 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLY 713 Query: 175 VKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVL 217 + Y R+ A +E + + Y+++ +Y++A+ ++ L Sbjct: 714 AANGIGAVLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCL 773 Query: 218 ANY---SDAEHAEEAMARLVEAYVALALMDEAREVV 250 + + E + L A + E ++ + Sbjct: 774 RKFYKHQNT----EVLLYLARALFKCGKLQECKQTL 805 >gi|300870170|ref|YP_003785041.1| response regulator aspartate phosphatase [Brachyspira pilosicoli 95/1000] gi|300687869|gb|ADK30540.1| response regulator aspartate phosphatase containing TPR repeat domain [Brachyspira pilosicoli 95/1000] Length = 145 Score = 42.8 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 29/92 (31%), Gaps = 9/92 (9%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 I F + D + RY + + EKA + + A Y+ + Sbjct: 7 LLLIFALFTISCATTVKVDA------EERYPKIIAEKAYTEFNNKRYKTAIAYYQYIIDN 60 Query: 87 FPFAGVARK---SLLMSAFVQYSAGKYQQAAS 115 F A+ + F Y KY++A Sbjct: 61 FDRNNFAKDVSWAYYEIGFCYYYQNKYEEAID 92 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 35/89 (39%), Gaps = 17/89 (19%) Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES---KNVDYVYYLVGMS 140 +P K + A+ +++ +Y+ A + + I + + K+V + YY +G Sbjct: 27 EERYP------KIIAEKAYTEFNNKRYKTAIAYYQYIIDNFDRNNFAKDVSWAYYEIGFC 80 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y + + + Y + ++ + Sbjct: 81 YYYQNK--------YEEAIDYFNIVINDF 101 >gi|255077111|ref|XP_002502207.1| predicted protein [Micromonas sp. RCC299] gi|226517472|gb|ACO63465.1| predicted protein [Micromonas sp. RCC299] Length = 1219 Score = 42.8 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 38/125 (30%), Gaps = 13/125 (10%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + +E Y A L++ N +A + + AG A + A +Y +A Sbjct: 204 KPPKERYTMANRALRDGNNVRALKLYASVDPAELDAGKAPQYWGNVALAHVRNKEYPEAV 263 Query: 115 SLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATKL-----MLQY-MSRIV 166 I + P Y Y +G + + R + + + + + Sbjct: 264 EAARRCIKEDPT-----YAKGRYRLGEALLKRARTAEHVLPNVRKEWVRGAIDEGFNEAL 318 Query: 167 ERYTN 171 + Sbjct: 319 RLNPD 323 >gi|330998201|ref|ZP_08322027.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT 11841] gi|329568893|gb|EGG50691.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT 11841] Length = 933 Score = 42.8 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 62/203 (30%), Gaps = 33/203 (16%) Query: 88 PFAGVARKSLLMSA-FVQYSAG--------KYQQAASLGEEYITQYPESKNVDYVYYLVG 138 PF ++ Y AG + A I +P+ + D VYY + Sbjct: 547 PFTEEQLQASNDILRDALYQAGILEMERLENFGLARRTLLRLIETFPDVADKDNVYYHLF 606 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK---EVE 195 + ++ QY R++E + +S Y + + Sbjct: 607 LINGRLNDMA--------EAEQYKQRLIEEFPDSRYAIMLANPKYELYARQGKHIEDSLY 658 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEH-----AEEAMARLVEAYVAL--ALMDEARE 248 Y Y ++ V NYS + A A ++A L D Sbjct: 659 AATY----EAYG--KNEYEEVFRNYSISTSDFPEGAHRAKFMFIQAMSQLYGGERDSFLV 712 Query: 249 VVSLIQERYPQGYWARYVETLVK 271 + + E+YP+ +++VK Sbjct: 713 TLKQVIEKYPKDEVTEIAQSIVK 735 >gi|297798124|ref|XP_002866946.1| hypothetical protein ARALYDRAFT_912592 [Arabidopsis lyrata subsp. lyrata] gi|297312782|gb|EFH43205.1| hypothetical protein ARALYDRAFT_912592 [Arabidopsis lyrata subsp. lyrata] Length = 1043 Score = 42.8 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 40/191 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + + E N+ KA F++ +P ++L+ + + A + Sbjct: 293 SRGIAQVNEGNYMKAISIFDKVLKEEPTYP------EALIGRGTAYAFQRELESAIADFT 346 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + I P + + G + A + V ++ +++ + NSP V Sbjct: 347 KAIQSNPAATE---AWKRRGQARAALGEYV--------EAVEDLTKALVFEPNSPDVL-- 393 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 E I + K ++ AA+ + L D + A L A+ Sbjct: 394 -------------HERGIVNF--KSKDFTAAVKDLSICLKQEKDNKSAY---TYLGLAFA 435 Query: 239 ALALMDEAREV 249 +L +A E Sbjct: 436 SLGEYKKAEEA 446 >gi|51783969|ref|NP_001001725.1| intraflagellar transport protein 88 homolog [Danio rerio] gi|45479854|gb|AAS66768.1| Ift88 [Danio rerio] Length = 824 Score = 42.8 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 32/258 (12%), Positives = 79/258 (30%), Gaps = 53/258 (20%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 Q+ R L D + K ++++ KA E++ + R+ + +L Sbjct: 469 QADRYAELAMSADRYNPAALINKGNTLFVKEDYEKAAEFYKESLRND--SSCTE-ALYNL 525 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIRD 147 G+ ++A ++ + +N V Y + Y Q+ Sbjct: 526 GLTYKRLGRLEEALDC---FLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLTSV 582 Query: 148 VPYDQRAT-------------KLMLQYMSRIVERYT--------------NSPYVKGARF 180 P D + QY + ++ + + A Sbjct: 583 TPTDAQVLAKLGDLYDNEGDKSQAFQYYYESYRYFPSNISVIEWLGAYYIDTQFCEKAIQ 642 Query: 181 ---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 T+ + ++ + Y + G Y A+ ++ + + + E + LV Sbjct: 643 YFERATLIQPTQVKWQLMVASCYRRSGNYQKALETYKEIHRKFPE---NVECLRFLVRLC 699 Query: 238 VALALMDEAREVVSLIQE 255 + L E ++ + +++ Sbjct: 700 TDMGLK-EVQDYATKLKK 716 >gi|116747861|ref|YP_844548.1| hypothetical protein Sfum_0413 [Syntrophobacter fumaroxidans MPOB] gi|116696925|gb|ABK16113.1| uncharacterized domain [Syntrophobacter fumaroxidans MPOB] Length = 584 Score = 42.8 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 34/128 (26%), Gaps = 26/128 (20%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASLGEEYITQYP 125 + A E + S L + + K+ +A E+ I P Sbjct: 474 GEYEPALEALERAELL--------NSELKEIYNLRGFCYFKLKKHHEAIEAFEKAIELDP 525 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV--T 183 S +DY I D + ++ +E + + + Sbjct: 526 GS-AIDYA----------NIGSNLRDLGHREEAIKVYRIALELDPGIDFARENIDRLEAD 574 Query: 184 VGRNQLAA 191 + R + A Sbjct: 575 LARERAAG 582 >gi|254302061|ref|ZP_04969419.1| hypothetical protein FNP_2105 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322253|gb|EDK87503.1| hypothetical protein FNP_2105 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 936 Score = 42.8 bits (100), Expect = 0.049, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 47/129 (36%), Gaps = 11/129 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 Q+ + A FL ++N A + + + + + S++ V Y+ Y +A Sbjct: 127 QKTFFAVAQNFLAKENNEAALKAYKEIIDN-KYESYKE-SMMGLGIVYYNLKDYDKAIYW 184 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 EY + P+ +N + V YL + + T + + ++ Y + Sbjct: 185 LSEYSKEMPK-ENKEMVSYLRASALYRK--------GNTDDAISRFEELANIEPSTEYSR 235 Query: 177 GARFYVTVG 185 A Y+ Sbjct: 236 KAALYLIEI 244 Score = 42.4 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 67/204 (32%), Gaps = 29/204 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K + + + +A F + + ++ K L + A +Y +A GE+Y Sbjct: 508 YLKGIAAMGLGKYDEAEAEFQKVLASGDQS-LSTKVYLNRVRNYFLAERYNEAVQAGEQY 566 Query: 121 I-TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P+ + Y L +G+SY ++ + YDQ S Y K Sbjct: 567 LSKLSPDKEKAIYSEMLDKIGLSYFRLGK---YDQAR-----------------SYYSKI 606 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A + +I Y Y A ++ V + + + E+A + + Sbjct: 607 ASMKGYEVYGR-----FQIADSYYNEQNYEKAGNLYKEVYNQFGETFYGEQAYYKYIMTL 661 Query: 238 VALALMDEAREVVSLIQERYPQGY 261 D + + YP Sbjct: 662 SLTGNTDAFEREKNNFMKVYPNSN 685 Score = 35.1 bits (80), Expect = 9.8, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 20/59 (33%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 Y + + Y +A ++ N A F + + P +RK+ L + Sbjct: 187 EYSKEMPKENKEMVSYLRASALYRKGNTDDAISRFEELANIEPSTEYSRKAALYLIEIY 245 >gi|213964306|ref|ZP_03392532.1| TPR repeat-containing protein [Capnocytophaga sputigena Capno] gi|213953048|gb|EEB64404.1| TPR repeat-containing protein [Capnocytophaga sputigena Capno] Length = 252 Score = 42.8 bits (100), Expect = 0.049, Method: Composition-based stats. Identities = 8/71 (11%), Positives = 24/71 (33%), Gaps = 3/71 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++EK + ++ ++ A E + + A Y ++ E+ Sbjct: 26 LFEKGAQYYQQGEYTNAIEQYKAILAH---GKESSALYYNLANAHYKLNHVPESIYYYEK 82 Query: 120 YITQYPESKNV 130 + P+++ Sbjct: 83 ALQLNPDNQQA 93 >gi|209523074|ref|ZP_03271631.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] gi|209496661|gb|EDZ96959.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] Length = 891 Score = 42.8 bits (100), Expect = 0.049, Method: Composition-based stats. Identities = 19/157 (12%), Positives = 42/157 (26%), Gaps = 38/157 (24%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + + + +A + P + A Y + A + Sbjct: 364 GKILVSQNRYEQAISQYQILVTQNPDCEWFYGF--------LADAYYQNKDWLTALENYQ 415 Query: 119 EYITQYPE------------SK--NVDYVY--YLVGMS------YAQMIRDVPYDQRATK 156 + I+ K N D Y ++ Y + I +V Q + Sbjct: 416 KAISINSNQDCFYCGLGNCLHKLGNFDQAIEAYRKAITIKNYPWYYEEIINVLMSQEKWE 475 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 L++ ++ N Y + + + L E Sbjct: 476 DALEFCFESLKNDPNH-YQFYDKMKINLL--HLGRHE 509 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 36/224 (16%), Positives = 71/224 (31%), Gaps = 37/224 (16%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++++A+ +L+E F +A Q + P + + + + A + ++ Sbjct: 14 LHQQAIAYLEEGKFDEAIANCQQVIQQQP--EW-VMAYKTLGLALQKSNRLEAAENAYKK 70 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP--YVKG 177 I N+ Y +G YAQ R + + + + N Y Sbjct: 71 AINL---DPNLVAAYGNLGSLYAQQER--------WEEAEVTLKQAISIDPNFRGLYRNL 119 Query: 178 AR------------------FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 AR + Q +E++IG + G++ A+ FQ +A Sbjct: 120 ARVLTKIGRPEEAQSYWQKGLKLDAILKQRGQEELQIGNTLAESGKWSEAVSAFQKAIAY 179 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + A +L + L EA P W+ Sbjct: 180 HPQLFLAH---HKLGLGLMQLNQPAEAVSAFEKAIAIQPDFSWS 220 >gi|220925788|ref|YP_002501090.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060] gi|219950395|gb|ACL60787.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium nodulans ORS 2060] Length = 202 Score = 42.8 bits (100), Expect = 0.049, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 39/134 (29%), Gaps = 20/134 (14%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGK 109 + + +A LK+++ + A E ++ P G +R++ Y Sbjct: 77 SGSDTADLLANRAGQALKDKDAALAVELLDRVVTLEPGWAEGWSRRAT-----AFYLLDD 131 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSY-AQMIRDVPYDQRATKLMLQYMSRIVER 168 A + + P + +++ D L R E Sbjct: 132 QASALADLHRALRLEPRHFEA-WA----ALAHIYMASDDKVR-------ALAAFRRAQEI 179 Query: 169 YTNSPYVKGARFYV 182 Y ++ A ++ Sbjct: 180 YPRMGKLREAIEHL 193 >gi|325204426|gb|ADY99879.1| putative lipoprotein [Neisseria meningitidis M01-240355] Length = 238 Score = 42.8 bits (100), Expect = 0.050, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 42/125 (33%), Gaps = 11/125 (8%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S + +Y +A+ K FS A +A++S+ + + G Sbjct: 112 SAHTAETAQNLYNQALKHYKSGRFSAAASLLKGADGGD-GGSIAQRSMYLLLQSRARMGN 170 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVER 168 + +G Y ++ +S + +G + +D+ +++ Sbjct: 171 CESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIAR---------ATWRSLIQA 221 Query: 169 YTNSP 173 Y +SP Sbjct: 222 YPSSP 226 >gi|224370036|ref|YP_002604200.1| hypothetical protein HRM2_29490 [Desulfobacterium autotrophicum HRM2] gi|223692753|gb|ACN16036.1| conserved hypothetical protein [Desulfobacterium autotrophicum HRM2] Length = 598 Score = 42.8 bits (100), Expect = 0.050, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 4/96 (4%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDF-PFAGVAR 94 + + ++D+ D E+Y K+ +F A + F + + P + Sbjct: 366 AGDYDQAEKHFIDAQLDRPDMAELYYNIGGAAYKKGDFDAAVKNFTRARQTDDPG--LKP 423 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 K++ Y +G + A EE ++ PE K Sbjct: 424 KAIYNLGNALYRSGNLKAAIKAYEELVSLSPEDKEA 459 >gi|147785383|emb|CAN66287.1| hypothetical protein VITISV_011185 [Vitis vinifera] Length = 261 Score = 42.8 bits (100), Expect = 0.050, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 6/82 (7%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKS 96 + RD D V + EK + +F +A +YF Q ++ F+ AR Sbjct: 68 SPNERDASADVSQRVSEAVSLLEKGRELQAQGDFERALQYFTQVVNNYKDFAFSDYAR-- 125 Query: 97 LLMSAFVQYSAGKYQQAASLGE 118 + A Y G Q+A + E Sbjct: 126 -VGRALALYEVGDRQEAIAEME 146 >gi|39998366|ref|NP_954317.1| lysM domain-containing protein [Geobacter sulfurreducens PCA] gi|39985312|gb|AAR36667.1| lysM domain protein [Geobacter sulfurreducens PCA] gi|298507306|gb|ADI86029.1| LysM domain protein [Geobacter sulfurreducens KN400] Length = 235 Score = 42.8 bits (100), Expect = 0.050, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 21/51 (41%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 + +YEK V K +S++ E F + +P + + + L A Sbjct: 182 EHSLYEKGVSAYKSGAYSQSVELFERFLARYPSSPLVPDATLYRADAFLKM 232 >gi|71032605|ref|XP_765944.1| hypothetical protein [Theileria parva strain Muguga] gi|68352901|gb|EAN33661.1| hypothetical protein, conserved [Theileria parva] Length = 356 Score = 42.8 bits (100), Expect = 0.050, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 31/72 (43%), Gaps = 11/72 (15%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y+ G Y++A E+ + P +++ V +LVG Y + ++ + + S Sbjct: 76 YYNDGDYEKALEYLEKSLQLNPMNES---VQFLVGCCYLKSLK--------IESAITAFS 124 Query: 164 RIVERYTNSPYV 175 R+V ++ Sbjct: 125 RVVSINPDNSDA 136 >gi|257464684|ref|ZP_05629055.1| tetratricopeptide repeat protein [Actinobacillus minor 202] gi|257450344|gb|EEV24387.1| tetratricopeptide repeat protein [Actinobacillus minor 202] Length = 397 Score = 42.8 bits (100), Expect = 0.050, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 75/197 (38%), Gaps = 32/197 (16%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LDS D ++++ K A F+ + +A Y+ + FA + S LM + Sbjct: 103 LDSSPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYILLLDEPEFAVNS-LSQLMEIY-- 159 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++++A ++ E+ + PE+ + +Y DQ A L + + Sbjct: 160 QKTKEWKKAINVSEKLLKIAPETDRIPLAHYY---CEYAQAVKNE-DQNAF---LSLLEK 212 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +E + A + +G Y+L+ + A ++ VL D++ Sbjct: 213 ALEHFPQC-----------------ARASMMLGDYHLENQRFRTAADYYEKVL--IQDSD 253 Query: 225 HAEEAMARLVEAYVALA 241 + E + ++ Y+ L Sbjct: 254 YIGEVLDKIRTCYLTLK 270 >gi|163783159|ref|ZP_02178153.1| hypothetical protein HG1285_14084 [Hydrogenivirga sp. 128-5-R1-1] gi|159881493|gb|EDP75003.1| hypothetical protein HG1285_14084 [Hydrogenivirga sp. 128-5-R1-1] Length = 341 Score = 42.8 bits (100), Expect = 0.050, Method: Composition-based stats. Identities = 32/218 (14%), Positives = 73/218 (33%), Gaps = 20/218 (9%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 T R +Y+ + +N+S+A + ++ P + +L M+ + Sbjct: 21 EQTKESEWRHLYDLGMSAYYARNYSEAIARLYRAAKIAPKEPLIWNALGMT---YMEVEE 77 Query: 110 YQQAASLGEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVP--YDQRATKLMLQYMSR 164 Y++A + + P + YL Y + I+ + Sbjct: 78 YKKAEEAFKRALASNPNHAESKMNLGILYLRMKDYRRAIKFLQEALSDETFDKKHIAFYY 137 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAK------EVEIGRYYLKRGEYVAAIPRFQLVLA 218 + Y + + Y+ + A ++E+G Y+ Y A ++ ++A Sbjct: 138 LARVY---RELGDRKKYLEYLKKATAYNPMFLDAQLELGSAYMDDKRYEEAERLYKSLIA 194 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 N ++ + Y ++A+E V L+ E Sbjct: 195 NNFKTPDIYLSL---AKVYYETGDYEKAKETVKLVLEN 229 >gi|99080413|ref|YP_612567.1| tetratricopeptide TPR_2 [Ruegeria sp. TM1040] gi|99036693|gb|ABF63305.1| Tetratricopeptide TPR_2 [Ruegeria sp. TM1040] Length = 194 Score = 42.8 bits (100), Expect = 0.050, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 7/73 (9%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117 + + + Q++ A E+F + P FA + ++ ++A + A + Sbjct: 77 LLRRGREAMARQDWQAAIEHFTALTDHAPEFAEGWSERAR-----AFFNAELFGPAVADL 131 Query: 118 EEYITQYPESKNV 130 E + P N Sbjct: 132 ERALALNPNDFNA 144 >gi|296133328|ref|YP_003640575.1| hypothetical protein TherJR_1825 [Thermincola sp. JR] gi|296031906|gb|ADG82674.1| hypothetical protein TherJR_1825 [Thermincola potens JR] Length = 269 Score = 42.8 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 21/121 (17%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRD---------VYLDSVTDVRYQREVYEKAVLFLK 69 + + A+ +F S ++ FL G + S + Y + + Sbjct: 2 MRRVAVLLFIS-SILFLSGCSNNKPPENSFVTNLPREETGSRNKPAVSDDAYANGLRAMV 60 Query: 70 EQNFSKAYEYFNQC---SRDFPFA----GVARKS----LLMSAFVQYSAGKYQQAASLGE 118 +++ KA E+F + ++F A VA+K+ L+ A + +G + A + E Sbjct: 61 HKDYYKAIEFFEKVVPEDKNFQDACNQLKVAKKALAKDLIDKARANFVSGNIKAALANIE 120 Query: 119 E 119 E Sbjct: 121 E 121 >gi|146298608|ref|YP_001193199.1| TPR repeat-containing protein [Flavobacterium johnsoniae UW101] gi|146153026|gb|ABQ03880.1| TPR repeat-containing protein [Flavobacterium johnsoniae UW101] Length = 593 Score = 42.8 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 45/132 (34%), Gaps = 14/132 (10%) Query: 62 EKAVLFLKEQNF-------SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + A+ + +F +A F ++F + +LL + S + A Sbjct: 464 QTALKEFAKGDFLLYQNKKPEAITQFQNILKNFKGQEIEAVTLLRLGKIYESQKDFASAL 523 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 S ++ I + + VD + Y ++DV + +++ + +S Y Sbjct: 524 SQYQQIIDNHSDGIYVDEALFFSAEIYNDELKDV-------EKAKPLYEKVIFNHQDSIY 576 Query: 175 VKGARFYVTVGR 186 AR R Sbjct: 577 FVDARKKYRELR 588 Score = 40.9 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 40/273 (14%), Positives = 95/273 (34%), Gaps = 32/273 (11%) Query: 14 AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK---- 69 Y++ F L++ A ++ + + Y++A ++ Sbjct: 324 LVTYEVTPFTLSLQLIQAHFLAFNLKKTEEAKTVVKKALTLNLNA--YQQADAKMELADI 381 Query: 70 ---EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 E+ +++A Y++Q D ++ ++ L +A Y G ++ A +E + + Sbjct: 382 LLLEEKYNQALIYYSQIQLDLKNDVMSHEASLKAAKTSYYKGDFEWALKQFKELKSANTQ 441 Query: 127 SKNVDYVYYLVGMSYAQMIRD---VPYDQRATKL-MLQYMSRIVERYTNSPYVKGARFYV 182 D + Y +I D Q A K + A Sbjct: 442 LIAND------ALEYFLLINDNTAADSTQTALKEFAKGDFLLYQNKKP------EAITQF 489 Query: 183 TVGRNQLAAKEVEI------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 +E+E G+ Y + ++ +A+ ++Q ++ N+SD + +EA+ E Sbjct: 490 QNILKNFKGQEIEAVTLLRLGKIYESQKDFASALSQYQQIIDNHSDGIYVDEALFFSAEI 549 Query: 237 Y-VALALMDEAREVVSLIQERYPQGYWARYVET 268 Y L +++A+ + + + + Sbjct: 550 YNDELKDVEKAKPLYEKVIFNHQDSIYFVDARK 582 >gi|322500184|emb|CBZ35261.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 811 Score = 42.8 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 63/219 (28%), Gaps = 48/219 (21%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-- 110 + +Y + K + +A F + ++L+ S+ V Y Sbjct: 507 EADNVEAIYNLGLAAKKLGLYEEAVRMFKRV-----------QALVDSSEVLYQIADLSD 555 Query: 111 ----QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 A I + P N +G YA+ DV Y Sbjct: 556 LVGDPAALEWFNRLIGRVPTDPN---ALARIGSLYARDGDDV--------QAFHYYLEAY 604 Query: 167 ERY--------------TNSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 Y + A + + Q ++ + + +RG+YV A Sbjct: 605 RYYQVNMDVISWLGAYFVKNEVYDKAVQFFERASHIQPQEVKWQLMVASCHRRRGDYVQA 664 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 ++ V Y D E + LV+ L +EA E Sbjct: 665 KRLYEQVHRKYPD---NIECLNYLVQLCKDAGLNEEANE 700 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 69/208 (33%), Gaps = 43/208 (20%) Query: 62 EKAVLFLKEQNFSKAYEY------FNQC--SRDFPFAGVARKSLLMSAFV-------QYS 106 E A+L L+ +++ A E + + + +A + + + QY Sbjct: 144 ESAMLALQ-KDYGAALEKAKDAGKLERLLCKKREQYG-LAEQINVDLTYAVHFNLAVQYQ 201 Query: 107 AGK-YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + Y +A + I V + + ++ Q+ L ++ ++ Sbjct: 202 NHQLYTEALNTYNLIIRN---------VQFPQAGRLRVNMGNIYLAQQNYLLAIKMYRKV 252 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 ++ G + RN I ++K G+Y A ++ V+ DA Sbjct: 253 LDETP----TAGKELRYHLCRN--------IANAFVKLGQYRDAANSYETVVEGNGDANA 300 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLI 253 L+ Y AL ++ + + + Sbjct: 301 T----FNLILCYYALGETEKMKRTFTRL 324 >gi|269963140|ref|ZP_06177475.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832104|gb|EEZ86228.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 251 Score = 42.8 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + + Y +S Y A +G+ Y Sbjct: 137 YQDAVDLILKKRDYTGAIAAFQQFQKDYPDSTYS--------------ANSHYWLGQLYF 182 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A+ F V+ +Y D+ +A+ +L + +A++ + + YP Sbjct: 183 AKKQDKDAVKSFAAVV-SYKDSNKRADALVKLGDIAERNNNDAQAKKYYQQVVDEYPGSA 241 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 242 SAKVASSKLK 251 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 42/124 (33%), Gaps = 23/124 (18%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A + +++ YP+S +Y +G Y +D K ++ + + Sbjct: 146 KKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKKQD--------KDAVKSFAAV 197 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V Y +S A + + + + +YY Q V+ Y + Sbjct: 198 VS-YKDSNKRADALVKLGDIAER-NNNDAQAKKYY-------------QQVVDEYPGSAS 242 Query: 226 AEEA 229 A+ A Sbjct: 243 AKVA 246 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 48/138 (34%), Gaps = 16/138 (11%) Query: 50 SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY--- 105 T ++ Y+ AV LK+++++ A F Q +D+P + + S + + Sbjct: 126 KYTSNADEQTAYQDAVDLILKKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKK 185 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 ++ + Y +K D + ++ + +Y ++ Sbjct: 186 QDKDAVKSFAAVVSYKD---SNKRAD--------ALVKLGDIAERNNNDA-QAKKYYQQV 233 Query: 166 VERYTNSPYVKGARFYVT 183 V+ Y S K A + Sbjct: 234 VDEYPGSASAKVASSKLK 251 >gi|62184697|ref|YP_219482.1| hypothetical protein CAB050 [Chlamydophila abortus S26/3] gi|62147764|emb|CAH63508.1| conserved hypothetical protein [Chlamydophila abortus S26/3] Length = 335 Score = 42.8 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 65/201 (32%), Gaps = 34/201 (16%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + +Y KAV+ N +A R P K+ + ++ ++ + Sbjct: 141 DPWNPQSLYNKAVVLTDMNNEQEAIALLETTVRKNPL-YW--KAWIKLGYLLSRHKQWDK 197 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A E + P ++ +Y +G+ Y + + T+L L+ + Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQEAL------ 240 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 + A +G Y+ + A F L + EH E + Sbjct: 241 -----------FLNEEDADAHFYVGLAYMDLKQNRQASDAFHRALGI--NLEH-ERSHYL 286 Query: 233 LVEAYVALALMDEAREVVSLI 253 L Y ++A + +S + Sbjct: 287 LGYLYHMEGQFEKAEKELSFL 307 >gi|326919998|ref|XP_003206263.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Meleagris gallopavo] Length = 1167 Score = 42.8 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 98/276 (35%), Gaps = 39/276 (14%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 A L RA E + ++T +++A + E + +Y + + + + Y Sbjct: 476 ASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYL 535 Query: 63 K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + + NF +A ++F + ++D P + L A ++ E Sbjct: 536 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 589 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSPY 174 + Q P ++N Y +G + Q + D+ R L +++ + Y Sbjct: 590 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLY 648 Query: 175 VKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVL 217 + Y R+ A +E + + Y+++ +Y++A+ ++ L Sbjct: 649 AANGIGAVLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCL 708 Query: 218 ANY---SDAEHAEEAMARLVEAYVALALMDEAREVV 250 + + E + L A + E ++ + Sbjct: 709 RKFYKHQNT----EVLLYLARALFKCGKLQECKQTL 740 >gi|146090777|ref|XP_001466347.1| intraflagellar transport protein IFT88 [Leishmania infantum JPCM5] gi|134070709|emb|CAM69062.1| putative intraflagellar transport protein IFT88 [Leishmania infantum JPCM5] Length = 811 Score = 42.8 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 63/219 (28%), Gaps = 48/219 (21%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-- 110 + +Y + K + +A F + ++L+ S+ V Y Sbjct: 507 EADNVEAIYNLGLAAKKLGLYEEAVRMFKRV-----------QALVDSSEVLYQIADLSD 555 Query: 111 ----QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 A I + P N +G YA+ DV Y Sbjct: 556 LVGDPAALEWFNRLIGRVPTDPN---ALARIGSLYARDGDDV--------QAFHYYLEAY 604 Query: 167 ERY--------------TNSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 Y + A + + Q ++ + + +RG+YV A Sbjct: 605 RYYQVNMDVISWLGAYFVKNEVYDKAVQFFERASHIQPQEVKWQLMVASCHRRRGDYVQA 664 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 ++ V Y D E + LV+ L +EA E Sbjct: 665 KRLYEQVHRKYPD---NIECLNYLVQLCKDAGLNEEANE 700 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 69/208 (33%), Gaps = 43/208 (20%) Query: 62 EKAVLFLKEQNFSKAYEY------FNQC--SRDFPFAGVARKSLLMSAFV-------QYS 106 E A+L L+ +++ A E + + + +A + + + QY Sbjct: 144 ESAMLALQ-KDYGAALEKAKDAGKLERLLCKKREQYG-LAEQINVDLTYAVHFNLAVQYQ 201 Query: 107 AGK-YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + Y +A + I V + + ++ Q+ L ++ ++ Sbjct: 202 NHQLYTEALNTYNLIIRN---------VQFPQAGRLRVNMGNIYLAQQNYLLAIKMYRKV 252 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 ++ G + RN I ++K G+Y A ++ V+ DA Sbjct: 253 LDETP----TAGKELRYHLCRN--------IANAFVKLGQYRDAANSYETVVEGNGDANA 300 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLI 253 L+ Y AL ++ + + + Sbjct: 301 T----FNLILCYYALGETEKMKRTFTRL 324 >gi|37589898|gb|AAH00750.4| PPP5C protein [Homo sapiens] gi|38197276|gb|AAH01831.4| PPP5C protein [Homo sapiens] Length = 484 Score = 42.8 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102 + ++ E+ +A + K +++ A ++++Q P +S A+ Sbjct: 16 EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 72 Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y+ G +A L ++YI YY S + + L Sbjct: 73 TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 114 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + +V+ + A+ + K E Sbjct: 115 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 147 >gi|320104239|ref|YP_004179830.1| tetratricopeptide repeat-containing protein [Isosphaera pallida ATCC 43644] gi|319751521|gb|ADV63281.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera pallida ATCC 43644] Length = 364 Score = 42.8 bits (100), Expect = 0.053, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 34/109 (31%), Gaps = 13/109 (11%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + Y + F + KA E ++ R P R++ V ++ QA Sbjct: 265 KGYYNRGQAFYRLGRVDKALEDLDEAVRLQPDDPYPRQAR---GTVNSLLKRHDQAIEDF 321 Query: 118 EEYITQYPESKNVDYVYY-LVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 I P + Y G++Y D+ A + ++ Sbjct: 322 SAAIRANPTNP----ALYRQRGLAY-----RAKGDEEAAQRDFATARKL 361 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 51/171 (29%), Gaps = 26/171 (15%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLF----------LKEQNFSKAYEYFNQCSRDFPF 89 + S V D E Y++ E F +A E+F Q R P Sbjct: 203 SKVSSAVSNTPPHDPNDPLERYQRDRDAKAANAAGAKAYSEGRFEEAIEHFTQAIRRQPL 262 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 K Y G+ +A +E + P+ G + + R Sbjct: 263 GF---KGYYNRGQAFYRLGRVDKALEDLDEAVRLQPDDPYPRQA---RGTVNSLLKR--- 313 Query: 150 YDQRATKLMLQYMSRIVERYTNSP--YVKGARFYVTVGRNQLAAKEVEIGR 198 +DQ ++ S + +P Y + Y G + A ++ R Sbjct: 314 HDQ-----AIEDFSAAIRANPTNPALYRQRGLAYRAKGDEEAAQRDFATAR 359 >gi|254506051|ref|ZP_05118195.1| Tol system periplasmic component YbgF [Vibrio parahaemolyticus 16] gi|219550869|gb|EED27850.1| Tol system periplasmic component YbgF [Vibrio parahaemolyticus 16] Length = 260 Score = 42.8 bits (100), Expect = 0.053, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 49/130 (37%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + + Y +S + + +++ G+ Y Sbjct: 145 YQNAVDLILKKRDYTGAIAAFQQFQKDYPDSSFTPNSHYWL--------------GQLYF 190 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A+ F V+ +Y D+ +A+ +L + ++A + + + YP Sbjct: 191 AKKQDKEAVKSFAAVI-SYQDSNKRADALVKLGDIASRNNNTEQANKYYQQVLDEYPSSA 249 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 250 SAKLAKERIK 259 Score = 42.0 bits (98), Expect = 0.077, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 53/128 (41%), Gaps = 10/128 (7%) Query: 57 QREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ Y+ AV LK+++++ A F Q +D+P + S + ++ + ++A Sbjct: 141 EQTAYQNAVDLILKKRDYTGAIAAFQQFQKDYPDSSFTPNSHYWLGQLYFAKKQDKEAVK 200 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 I+ Y +S +G D+ T+ +Y ++++ Y +S Sbjct: 201 SFAAVIS-YQDSNKRADALVKLG--------DIASRNNNTEQANKYYQQVLDEYPSSASA 251 Query: 176 KGARFYVT 183 K A+ + Sbjct: 252 KLAKERIK 259 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 42/128 (32%), Gaps = 23/128 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A + +++ YP+S +Y +G Y +D K ++ + + Sbjct: 154 KKRDYTGAIAAFQQFQKDYPDSSFTPNSHYWLGQLYFAKKQD--------KEAVKSFAAV 205 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 + Y +S A + + + A +Q VL Y + Sbjct: 206 IS-YQDSNKRADALVKLGDIAS--------------RNNNTEQANKYYQQVLDEYPSSAS 250 Query: 226 AEEAMARL 233 A+ A R+ Sbjct: 251 AKLAKERI 258 >gi|224418202|ref|ZP_03656208.1| hypothetical protein HcanM9_02883 [Helicobacter canadensis MIT 98-5491] gi|253827529|ref|ZP_04870414.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313141737|ref|ZP_07803930.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253510935|gb|EES89594.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313130768|gb|EFR48385.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 294 Score = 42.8 bits (100), Expect = 0.053, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 46/133 (34%), Gaps = 21/133 (15%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + EV+ + L+++ + A EY + + + + + KY+ Sbjct: 174 KDKPLAEVFAEGEKLLEQKEYKLASEYLQKAVEGHY----KPARGNYLLGESAFYQKKYE 229 Query: 112 QAA----SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 A E Y DY+ L+ + AQ + + L+++ +V Sbjct: 230 DAIYYYKVSAERY-------DKADYMP-LLMLHTAQAFEKIN----NKENALKFLESLVV 277 Query: 168 RYTNSPYVKGARF 180 Y +S + A+ Sbjct: 278 LYPDSKEAQEAKK 290 >gi|114591086|ref|XP_001160720.1| PREDICTED: leprecan-like 1 isoform 3 [Pan troglodytes] Length = 462 Score = 42.8 bits (100), Expect = 0.053, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P+ ++V L + Y + + D D A+ + Sbjct: 68 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSTDP-ASIEARED 121 Query: 162 MSRIVERY 169 ++ V+R+ Sbjct: 122 LTMFVKRH 129 >gi|288928460|ref|ZP_06422307.1| BatD protein [Prevotella sp. oral taxon 317 str. F0108] gi|288331294|gb|EFC69878.1| BatD protein [Prevotella sp. oral taxon 317 str. F0108] Length = 847 Score = 42.8 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 9/69 (13%), Positives = 19/69 (27%), Gaps = 4/69 (5%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 A K N+ +A + + P + + + + QA E Sbjct: 623 ASADQEYKRGNYPQAIADYKALLKKAP----SAEVYYNLGNAYFRSDSIPQAILAYERAA 678 Query: 122 TQYPESKNV 130 P + + Sbjct: 679 LINPGNSQI 687 >gi|239906121|ref|YP_002952860.1| hypothetical protein DMR_14830 [Desulfovibrio magneticus RS-1] gi|239795985|dbj|BAH74974.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 458 Score = 42.8 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 46/134 (34%), Gaps = 18/134 (13%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKS 96 + L D +EK + F K+ F KA E+F++ + P A + Sbjct: 293 AETADPTPALPESRDSADAEAAFEKGIEFGKQNKFQKAIEFFDKAIKLNPNRADFFASR- 351 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 Y +Y +A + I + P + Y + G+S A+ + + Sbjct: 352 ----GHAHYYLAQYPKAIDDYTKAIEKNP---SFALAYSMRGLSRARSDK--------YQ 396 Query: 157 LMLQYMSRIVERYT 170 ++ ++ + Sbjct: 397 QAVEDFNKAISLGP 410 >gi|254413330|ref|ZP_05027101.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196179950|gb|EDX74943.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 1015 Score = 42.8 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 75/267 (28%), Gaps = 74/267 (27%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY------- 110 +Y++A+ +F A + + + + + L V Y+ +Y Sbjct: 256 NTLYKEALYLHHIGDFFPAEKKYKEVLQWHTYHA---DVLHDLGIVYYNLQQYQNCLSHL 312 Query: 111 ---------------------------QQAASLGEEYITQYP-----------------E 126 QA ++ I P + Sbjct: 313 LQSLAIDPASGLHHYSLGLVLEKIGNIPQAIEAYQKSIQLNPKLINAYNNLGVILCQTDQ 372 Query: 127 SKNVDYVYYLVGM--------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 ++ +YV Y + SY + + R ++ + ++ P Sbjct: 373 FQDAEYV-YRQAVTANPSHFGSYINLGNLLLEQHRNIDEAIELYQKALQLKPRDP---DV 428 Query: 179 RFYVTVGRNQL---AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR-LV 234 + + + A G Y R Y AAI +++ L + + ++ L Sbjct: 429 MQNLGIAYDLKHDPAKSAFYFGNYAHIRQNYEAAIEQYEKGLK----TQIGKSSIYINLA 484 Query: 235 EAYVALALMDEAREVVSLIQERYPQGY 261 + Y L ++A + YP+ Sbjct: 485 DCYEKLNQEEKAINTYHEGLKHYPKTP 511 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 41/143 (28%), Gaps = 12/143 (8%) Query: 126 ESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-----YVKGA 178 + +N+D Y + DV + + ++ + N Y Sbjct: 404 QHRNIDEAIELYQKALQLKPRDPDVMQNLGIAYDLKHDPAKSAFYFGNYAHIRQNYEAAI 463 Query: 179 RFYVTVGRNQLAAKEVEI--GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 Y + Q+ + I Y K + AI + L +Y L+ A Sbjct: 464 EQYEKGLKTQIGKSSIYINLADCYEKLNQEEKAINTYHEGLKHYPKTPRLY---FCLIVA 520 Query: 237 YVALALMDEAREVVSLIQERYPQ 259 + EA V S + P Sbjct: 521 LQNFGRIHEAITVASQAAQLLPN 543 >gi|189218346|ref|YP_001938988.1| TPR repeats containing protein [Methylacidiphilum infernorum V4] gi|189185204|gb|ACD82389.1| TPR repeats containing protein [Methylacidiphilum infernorum V4] Length = 855 Score = 42.8 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 62/191 (32%), Gaps = 29/191 (15%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQN--FSKAYEYFNQCSRDFPFAGVARKSLLMSA-FVQY 105 D TD +Y A A E + +P +A K+L +A + Y Sbjct: 547 DYPTDRLVPEALYLAAFSDYLAGKIGLHTAREKMLDLLKKYPSEPIAPKALFSAAEYA-Y 605 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + + A L EE +YP S+ D YY S + + L + +I Sbjct: 606 NEADFYGARWLFEEVPKEYPSSELADQAYYWAAKSAIEC--------KDLSGALLLLEKI 657 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 E + + G+ Y + +Y AAI F VL + Sbjct: 658 PENSP-----IKSEARLLQ------------GKIYFDQSQYAAAISLFDGVLDKEKGGKL 700 Query: 226 AEEAMARLVEA 236 A+ R ++ Sbjct: 701 HVLALLRKADS 711 Score = 38.9 bits (90), Expect = 0.71, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 29/74 (39%), Gaps = 2/74 (2%) Query: 25 TIFFSIAVCFLVGWERQSSR--DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 FS + +G + D+ ++ + ++ A E +F A F + Sbjct: 560 LAAFSDYLAGKIGLHTAREKMLDLLKKYPSEPIAPKALFSAAEYAYNEADFYGARWLFEE 619 Query: 83 CSRDFPFAGVARKS 96 +++P + +A ++ Sbjct: 620 VPKEYPSSELADQA 633 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 34/99 (34%), Gaps = 11/99 (11%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 ++ K L IF C +G S T + ++E+ + + S+ Sbjct: 12 RKMRKRTLKIFLFF--CSFIGCCLGS---------TVGSPEEALFEQIKEAMDDSLLSRT 60 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + + +P + ++ A Y KY++ + Sbjct: 61 IDLSREFENSYPHSVYLPSVCILHAEALYFQAKYEELIA 99 >gi|332880806|ref|ZP_08448477.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681189|gb|EGJ54115.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 933 Score = 42.8 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 62/203 (30%), Gaps = 33/203 (16%) Query: 88 PFAGVARKSLLMSA-FVQYSAG--------KYQQAASLGEEYITQYPESKNVDYVYYLVG 138 PF ++ Y AG + A I +P+ + D VYY + Sbjct: 547 PFTEEQLQASNDILRDALYQAGILEMERLENFGLARRTLLRLIETFPDVADKDNVYYHLF 606 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK---EVE 195 + ++ QY R++E + +S Y + + Sbjct: 607 LINGRLNDMA--------EAEQYKQRLIEEFPDSRYAIMLANPKYELYARQGKHIEDSLY 658 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEH-----AEEAMARLVEAYVAL--ALMDEARE 248 Y Y ++ V NYS + A A ++A L D Sbjct: 659 AATY----EAYG--KNEYEEVFRNYSISTSDFPEGAHRAKFMFIQAMSQLYGGERDSFLV 712 Query: 249 VVSLIQERYPQGYWARYVETLVK 271 + + E+YP+ +++VK Sbjct: 713 TLKQVIEKYPKDEVTEIAQSIVK 735 >gi|261868285|ref|YP_003256207.1| hypothetical protein D11S_1624 [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413617|gb|ACX82988.1| tetratricopeptide domain protein [Aggregatibacter actinomycetemcomitans D11S-1] Length = 396 Score = 42.8 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 75/200 (37%), Gaps = 32/200 (16%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LD+ +++++ K A F+ F +A E D P A +L + Sbjct: 103 LDNSPHYSFEQKLLAKQQLAKDFMTVGFFDRA-ENLYILMVDEP--EFAEGALQQLTVIY 159 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++++A ++ E+ P++ NV+ Y Y + ++ +P D + + Q + + Sbjct: 160 QKTKEWKKAINVAEKLAKIAPKANNVELAQY-----YCEYVQHLPADSKENRQ--QILLQ 212 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 ++ N + + +++ Y +A+ + +L Sbjct: 213 ALKVSPNCVRAS-----------------MMLADLAIQQENYKSAVGFLEEILNQSP--A 253 Query: 225 HAEEAMARLVEAYVALALMD 244 + EA+ L Y L L+D Sbjct: 254 YISEALPALKHCYQKLNLLD 273 >gi|169158541|emb|CAQ14425.1| intraflagellar transport 88 homolog [Danio rerio] gi|190338004|gb|AAI62512.1| Intraflagellar transport 88 homolog [Danio rerio] Length = 824 Score = 42.8 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 32/258 (12%), Positives = 79/258 (30%), Gaps = 53/258 (20%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 Q+ R L D + K ++++ KA E++ + R+ + +L Sbjct: 469 QADRYAELAMSADRYNPAALINKGNTLFVKEDYEKAAEFYKESLRND--SSCTE-ALYNL 525 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIRD 147 G+ ++A ++ + +N V Y + Y Q+ Sbjct: 526 GLTYKRLGRLEEALDC---FLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLTSV 582 Query: 148 VPYDQRAT-------------KLMLQYMSRIVERYT--------------NSPYVKGARF 180 P D + QY + ++ + + A Sbjct: 583 TPTDAQVLAKLGDLYDNEGDKSQAFQYYYESYRYFPSNISVIEWLGAYYIDTQFCEKAIQ 642 Query: 181 ---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 T+ + ++ + Y + G Y A+ ++ + + + E + LV Sbjct: 643 YFERATLIQPTQVKWQLMVASCYRRSGNYQKALETYKEIHRKFPE---NVECLRFLVRLC 699 Query: 238 VALALMDEAREVVSLIQE 255 + L E ++ + +++ Sbjct: 700 TDMGLK-EVQDYATKLKK 716 >gi|116327425|ref|YP_797145.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331983|ref|YP_801701.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120169|gb|ABJ78212.1| Conserved hypothetical protein containing tetratricopeptide repeat (TPR) domains [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125672|gb|ABJ76943.1| Conserved hypothetical protein containing tetratricopeptide repeat (TPR) domains [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 688 Score = 42.8 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 24/193 (12%), Positives = 62/193 (32%), Gaps = 31/193 (16%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +++ A + + + A E + + P +L+ V +Y +A + Sbjct: 379 DSLFQLAEAYYNKGDLLSAEETYRRIVSSTPGDSFTETALINLGVVLDQMERYSEAITAL 438 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P++ Y+ +G+ Y L ++ + + + + Sbjct: 439 SRVVDLNPKNAK---AYHTLGLVYKHSGNGT--------LAIENWRKSIAIEPENIQSRE 487 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A G Y + + A+ + V+ + DA ++ EAY Sbjct: 488 AL-----------------GDYLFENKFFREAVEEYIGVVKHKDDAYKVY---LKMAEAY 527 Query: 238 VALALMDEAREVV 250 + + A +++ Sbjct: 528 MGMQDDVNAEKIL 540 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 70/212 (33%), Gaps = 18/212 (8%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y AV + K+ +A E F + P +A S + Y+ Y+ A + Sbjct: 243 YNLAVSYFKKGEIPQAEEEFKKVVTKTPSGRLAALSYSYLGNIAYNKQDYKGAEYYFRQA 302 Query: 121 ITQYPESKNVDYVYYLV-----------GMSYAQMIRDVP-YDQRATKLMLQYMSRIVER 168 P Y+Y L + Y ++ RD D +L+ + S + + Sbjct: 303 SALSPN--EAKYLYNLAVVLQKNGNKEEALKYLELARDAGANDPEIYRLIAEGFSNLNQ- 359 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 A ++ Y +G+ ++A ++ ++++ E Sbjct: 360 ---GEMSISALQKSLKYNPTDLDSLFQLAEAYYNKGDLLSAEETYRRIVSSTPGDSFTET 416 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 A+ L + EA +S + + P+ Sbjct: 417 ALINLGVVLDQMERYSEAITALSRVVDLNPKN 448 >gi|94263356|ref|ZP_01287171.1| hypothetical protein MldDRAFT_1322 [delta proteobacterium MLMS-1] gi|94268863|ref|ZP_01291305.1| hypothetical protein MldDRAFT_2566 [delta proteobacterium MLMS-1] gi|93451437|gb|EAT02281.1| hypothetical protein MldDRAFT_2566 [delta proteobacterium MLMS-1] gi|93456311|gb|EAT06441.1| hypothetical protein MldDRAFT_1322 [delta proteobacterium MLMS-1] Length = 150 Score = 42.8 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 29/80 (36%), Gaps = 3/80 (3%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMDEAREVVSL 252 + I +Y+ + A R + +LA Y +++ EA+ Y + Sbjct: 71 LGIAKYHFDHDRFAEATARLEQLLAEYGRSDNTPEAIFLSGVCGYKQSHDPKPLKAAYER 130 Query: 253 IQERYPQGYWAR--YVETLV 270 + +P W + Y L+ Sbjct: 131 LSADFPASEWTKRAYPYRLL 150 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 7/82 (8%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 LL A + ++ +A + E+ + +Y S N +L G+ + +D + K Sbjct: 70 LLGIAKYHFDHDRFAEATARLEQLLAEYGRSDNTPEAIFLSGVCGYKQ----SHDPKPLK 125 Query: 157 LMLQYMSRIVERYTNSPYVKGA 178 + R+ + S + K A Sbjct: 126 AAYE---RLSADFPASEWTKRA 144 >gi|226471566|emb|CAX70864.1| hypothetical protein [Schistosoma japonicum] Length = 431 Score = 42.8 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 51/151 (33%), Gaps = 26/151 (17%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF----AGVARK--------SLL 98 + Y + EKA FLKE F A E + + + + +K L Sbjct: 253 PERIAYANTLKEKANNFLKESKFDSAIELYKRLDDELQYVVANGPTEQKELSGVTVAVQL 312 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A V K + ++ + + +++ + +G ++ + + Sbjct: 313 NLALVYLKLCKPDKCIEFCKKVLDNFSDNEK---ALFRIGQAHLLR--------KDHEEA 361 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + Y RIV + N+ A V + ++ Sbjct: 362 VVYFKRIVTKNPNN---ASAVKQVQICEEEI 389 >gi|226467001|emb|CAX75981.1| hypothetical protein [Schistosoma japonicum] Length = 431 Score = 42.8 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 51/151 (33%), Gaps = 26/151 (17%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF----AGVARK--------SLL 98 + Y + EKA FLKE F A E + + + + +K L Sbjct: 253 PERIAYANTLKEKANNFLKESKFDSAIELYKRLDDELQYVVANGPTEQKELSGVTVAVQL 312 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A V K + ++ + + +++ + +G ++ + + Sbjct: 313 NLALVYLKLCKPDKCIEFCKKVLDNFSDNEK---ALFRIGQAHLLR--------KDHEEA 361 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + Y RIV + N+ A V + ++ Sbjct: 362 VVYFKRIVTKNPNN---ASAVKQVQICEEEI 389 >gi|119577819|gb|EAW57415.1| protein phosphatase 5, catalytic subunit, isoform CRA_a [Homo sapiens] Length = 485 Score = 42.8 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102 + ++ E+ +A + K +++ A ++++Q P +S A+ Sbjct: 18 EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 74 Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y+ G +A L ++YI YY S + + L Sbjct: 75 TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 116 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + +V+ + A+ + K E Sbjct: 117 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149 >gi|301119041|ref|XP_002907248.1| anaphase-promoting complex subunit 7, putative [Phytophthora infestans T30-4] gi|262105760|gb|EEY63812.1| anaphase-promoting complex subunit 7, putative [Phytophthora infestans T30-4] Length = 639 Score = 42.8 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 22/70 (31%), Gaps = 4/70 (5%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + A L +++ N A + P + A+V +Y +A + Sbjct: 531 FALADLLVEDGNLRGAIDRLQALGERHP----REEVFTKLAYVYSMDKQYAEALKYYHQA 586 Query: 121 ITQYPESKNV 130 + P S Sbjct: 587 LRLNPGSTEA 596 >gi|198475829|ref|XP_002132507.1| GA27749 [Drosophila pseudoobscura pseudoobscura] gi|198137978|gb|EDY69909.1| GA27749 [Drosophila pseudoobscura pseudoobscura] Length = 954 Score = 42.8 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 17/162 (10%), Positives = 45/162 (27%), Gaps = 47/162 (29%) Query: 109 KYQQAASLGEEYITQYP-----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 +Y +A S ++Y+ + + Y +G++Y ++ R K ++ Sbjct: 119 EYSEALSAYQKYLRFNQNNYWTNHEFI----YGIGIAYFKL--------RCFKWAIKSFQ 166 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAK--------------------EVEI----GRY 199 ++ N + E+ + Sbjct: 167 ELLYLNPNFTCANDVHLRLGFMLKHCGEYHIALKHLQLALLYTNPSTYSELHVKFQIAHL 226 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 Y + ++ AA ++ +L ++ + Y L Sbjct: 227 YEVQNKHKAAKKAYEFLLNE------KNISLKLKADVYRQLG 262 >gi|254412886|ref|ZP_05026658.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196180050|gb|EDX75042.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 456 Score = 42.8 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 61/192 (31%), Gaps = 56/192 (29%) Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM------IRDVP-- 149 L + G Y+ A + + + P ++ Y+ GMS+ I D Sbjct: 28 LSQGIASFQQGDYRHAIAALNQALQINP---DLAQAYHYRGMSHYCQGDALGAIGDFDEV 84 Query: 150 --YDQRATKL----------------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 D + + +Q ++ ++ +S Y KG ++ R L Sbjct: 85 LRLDPQNAQAYSDRGLILATLNDRWGAMQDYNQALQL--DSNYAKGYLNR-SMLRLALED 141 Query: 192 KEVEIGR-------------YYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMAR---LV 234 + I YL RG I RF+ + Y DA + A+A L Sbjct: 142 YDGAIADCDQVIRMNPNLAEGYLNRG-----IARFE--VEAYQDAIGDCDRALAINSNLA 194 Query: 235 EAYVALALMDEA 246 AY + A Sbjct: 195 AAYFNRGMNHIA 206 >gi|195110969|ref|XP_002000052.1| GI22745 [Drosophila mojavensis] gi|193916646|gb|EDW15513.1| GI22745 [Drosophila mojavensis] Length = 515 Score = 42.8 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 45/149 (30%), Gaps = 26/149 (17%) Query: 42 SSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLL 98 + D D+ E Y K LK + FSKA + +++ +P + A ++L Sbjct: 28 TKPDSATDATQHDFAAAEQYKNKGNELLKTKEFSKAIDMYSKAIELYPSSAIYYANRAL- 86 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATK 156 + A G + P Y+ YY ++ + K Sbjct: 87 ----AHLRQESFGLALQDGVSAVKTDPT-----YLKGYYRRAAAHMSL--------GKFK 129 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVG 185 L + + N A+ T Sbjct: 130 QALSDFEYVAKCRPNDK---DAKLKFTEC 155 >gi|186683976|ref|YP_001867172.1| hypothetical protein Npun_R3845 [Nostoc punctiforme PCC 73102] gi|186466428|gb|ACC82229.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102] Length = 758 Score = 42.8 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 9/103 (8%), Positives = 32/103 (31%), Gaps = 5/103 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E ++ LK+ N+ A + + ++ + G+ +A ++ + I Sbjct: 10 EAGLIALKQGNYQTAIAQLEPIASSQNNGTASLQAQVGLVMAYARTGEVPKAIAISQNLI 69 Query: 122 TQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + V ++ + + + + + + Sbjct: 70 ESN--NPQVQEWAT--RALEHLTKRKKRDRESKNVETGFVAFD 108 >gi|18767668|gb|AAL54912.2|AF170083_1 putative transcriptional repressor [Candida albicans] Length = 1085 Score = 42.8 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 38/130 (29%), Gaps = 22/130 (16%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109 D Y + + +F+ AYE F Q P + Y + Sbjct: 358 DQSDAHSWYYLGRVEMIRGDFTAAYEAFQQAVNRDARNP-TFWC-----SIGVLYYQISQ 411 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIV 166 Y+ A I P + V+Y +G Y I D L + Sbjct: 412 YRDALDAYTRAIRLNP---YISEVWYDLGTLYETCNNQISD-------ALDALDAYRQAE 461 Query: 167 ERYTNSPYVK 176 N+P++K Sbjct: 462 RLDPNNPHIK 471 >gi|257466535|ref|ZP_05630846.1| hypothetical protein FgonA2_03743 [Fusobacterium gonidiaformans ATCC 25563] gi|315917690|ref|ZP_07913930.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] gi|313691565|gb|EFS28400.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] Length = 610 Score = 42.8 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 61/153 (39%), Gaps = 27/153 (17%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM---SAFVQYSAGKYQQAA- 114 E+Y KA +E+ + +AYE + R FP++ V +KS L A +QY + ++A Sbjct: 28 ELYLKAKKEYQEKKYQEAYETLSLLKRIFPYSRV-QKSKLSDYYLALIQYQLDQKEEAIR 86 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 L + + E ++ YL+G Y + K Y R++ +S Y Sbjct: 87 GLTANILPLHTEERD-----YLLGTLYMNK--------KNPKQANLYFQRLL----SSEY 129 Query: 175 V---KGARFYV--TVGRNQLAAKEVEIGRYYLK 202 + + + +N + ++Y Sbjct: 130 SYSHEKIEKKIEQILCKNNPYYQHYFAAKFYQN 162 >gi|257452674|ref|ZP_05617973.1| hypothetical protein F3_06374 [Fusobacterium sp. 3_1_5R] gi|317059214|ref|ZP_07923699.1| predicted protein [Fusobacterium sp. 3_1_5R] gi|313684890|gb|EFS21725.1| predicted protein [Fusobacterium sp. 3_1_5R] Length = 610 Score = 42.8 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 61/153 (39%), Gaps = 27/153 (17%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM---SAFVQYSAGKYQQAA- 114 E+Y KA +E+ + +AYE + R FP++ V +KS L A +QY + ++A Sbjct: 28 ELYLKAKKEYQEKKYQEAYETLSLLKRIFPYSRV-QKSKLSDYYLALIQYQLDQKEEAIR 86 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 L + + E ++ YL+G Y + K Y R++ +S Y Sbjct: 87 GLTANILPLHTEERD-----YLLGTLYMNK--------KNPKQANLYFQRLL----SSEY 129 Query: 175 V---KGARFYV--TVGRNQLAAKEVEIGRYYLK 202 + + + +N + ++Y Sbjct: 130 SYSHEKIEKKIEQILCKNNPYYQHYFAAKFYQN 162 >gi|302879779|ref|YP_003848343.1| tol-pal system protein YbgF [Gallionella capsiferriformans ES-2] gi|302582568|gb|ADL56579.1| tol-pal system protein YbgF [Gallionella capsiferriformans ES-2] Length = 246 Score = 42.8 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 37/99 (37%), Gaps = 14/99 (14%) Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + +++Y S ++ A +++ + L +Y A+ ++ +L Sbjct: 150 LQEFIKKYPASVHIPNAAYWLGETQFAL--------------KDYKGALVTYRALLKASP 195 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 D A + + + + L + +A + + +YP Sbjct: 196 DTARAPDVLFGIAGSQQELKAVTQAAATLKQLVGKYPDS 234 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 22/131 (16%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A + +A+ + A Y AA +E+I +YP S ++ Y +G + + Sbjct: 126 AENRAIEAAYSLFKAANYANAAKALQEFIKKYPASVHIPNAAYWLGETQFAL-------- 177 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + K L +++ ++ F + + +L A Sbjct: 178 KDYKGALVTYRALLKASPDTARAPDVLFGIAGSQQEL--------------KAVTQAAAT 223 Query: 213 FQLVLANYSDA 223 + ++ Y D+ Sbjct: 224 LKQLVGKYPDS 234 >gi|296108500|ref|YP_003620201.1| hypothetical protein lpa_04153 [Legionella pneumophila 2300/99 Alcoy] gi|295650402|gb|ADG26249.1| Hypothetical protein lpa_04153 [Legionella pneumophila 2300/99 Alcoy] Length = 245 Score = 42.8 bits (100), Expect = 0.056, Method: Composition-based stats. Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 8/70 (11%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A + ++ +A + FN+ + GKY++A ++ + Sbjct: 55 AASAAYRAGDYEQAAKLFNELK--------TEQGYYNQGNALAHLGKYEEAIRAYDKALA 106 Query: 123 QYPESKNVDY 132 P +++ Y Sbjct: 107 FNPNNQDALY 116 >gi|241754900|ref|XP_002412534.1| tetratricopeptide repeat protein, tpr, putative [Ixodes scapularis] gi|215506093|gb|EEC15587.1| tetratricopeptide repeat protein, tpr, putative [Ixodes scapularis] Length = 218 Score = 42.8 bits (100), Expect = 0.056, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 40/132 (30%), Gaps = 28/132 (21%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 + + ++ Y+ + +A + +N+ + P + Y Sbjct: 106 EKNEFEKHQAAKKYYDAGQALALRGRYEEAIKEYNKAIKLKP----------DEDVLYYK 155 Query: 107 AGK-------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 G Y++A ++ I+ P + D Y G S+ D + L Sbjct: 156 KGNSLAFLGRYEEAIECYDKSISLNP--EYAD-AYNNKGNSFF--------DLEKYEEAL 204 Query: 160 QYMSRIVERYTN 171 + +E N Sbjct: 205 VEYDKAIELKPN 216 >gi|218438596|ref|YP_002376925.1| hypothetical protein PCC7424_1618 [Cyanothece sp. PCC 7424] gi|218171324|gb|ACK70057.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424] Length = 217 Score = 42.8 bits (100), Expect = 0.056, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 46/152 (30%), Gaps = 21/152 (13%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 KF L + +A+ + +++D E+ + K +N+++A Sbjct: 6 KKFNLFLPALLALSITAIPQMGNAQD-------SAPSLEELIQLGNQAAKSKNYAQAERL 58 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F + +P + A Y GK ++A + I PE Sbjct: 59 FYNAVKLYPNYP---AAYYNLAKALYDQGKLEEAETNYRRAILLNPEYAEA--------- 106 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + V DQ + + R + Sbjct: 107 --YNNLGSVLSDQGKLEEAIINFERAIHFNPQ 136 >gi|291279654|ref|YP_003496489.1| hypothetical protein DEFDS_1266 [Deferribacter desulfuricans SSM1] gi|290754356|dbj|BAI80733.1| hypothetical protein [Deferribacter desulfuricans SSM1] Length = 900 Score = 42.8 bits (100), Expect = 0.056, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 77/238 (32%), Gaps = 68/238 (28%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 ++N+ K YF + +P + ++LL+ A YQ + T Y +SK Sbjct: 677 DKENYIKYINYFFK---KYPNSKYQSEALLLRANFYEKNKLYQNCVIDAD---TAYKKSK 730 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV------------- 175 N + ++ + K + ++E+ + YV Sbjct: 731 NNE-ALFVKAKCLKYIDN---------KKAYEIFKMLLEKSSGYEYVSRKEIIDLSNDAE 780 Query: 176 --------------------------------KGARFYVTVGRNQLAAKEVEIGRYYLK- 202 + + Y+ K+ Y K Sbjct: 781 EVLTNSLFFKDKDINLYYHGLERYLNLLKTIGEDSYQYIMELLES-GDKDFVPAGLYFKG 839 Query: 203 -----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + +Y+ A+ F V + D+++ ++++ + Y+ + D+A ++ ++++ Sbjct: 840 VYLFNKKDYIYALKHFLKVYYLFKDSKYVKKSLEYAKDCYLKMGKKDKAEKIEKILKK 897 >gi|27734076|ref|NP_775555.1| prolyl 3-hydroxylase 2 precursor [Mus musculus] gi|81866302|sp|Q8CG71|P3H2_MOUSE RecName: Full=Prolyl 3-hydroxylase 2; AltName: Full=Leprecan-like protein 1; Flags: Precursor gi|27527202|emb|CAD23038.1| leprecan-like 1 protein [Mus musculus] Length = 703 Score = 42.8 bits (100), Expect = 0.056, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 33/68 (48%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P++++V L + + + + D D A+ + Sbjct: 309 FAYYRVGEYVKALECAKAYLMFHPDNEDV-----LDNVDFYESLLDDSTDP-ASIEARED 362 Query: 162 MSRIVERY 169 ++ V+R+ Sbjct: 363 LTAFVKRH 370 >gi|77464238|ref|YP_353742.1| hypothetical protein RSP_0667 [Rhodobacter sphaeroides 2.4.1] gi|126463080|ref|YP_001044194.1| hypothetical protein Rsph17029_2320 [Rhodobacter sphaeroides ATCC 17029] gi|77388656|gb|ABA79841.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1] gi|126104744|gb|ABN77422.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17029] Length = 274 Score = 42.8 bits (100), Expect = 0.056, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 10/126 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ-QAASLGEE 119 +++A L + +F A + F + + + ++ + G+ A + E Sbjct: 155 FDRAQEVLGQGDFRTAADLFKTFAETYTGGQLTYEAHYLRGEALSRLGETANAARAYLES 214 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P+ +G + D R T ++ + R+ SP A Sbjct: 215 FSGD-PDGPRAPEALLKLGRALG--------DLRQTPEACVTLAEVGTRFPGSPSAAEAA 265 Query: 180 FYVTVG 185 + Sbjct: 266 TTMQGL 271 Score = 38.6 bits (89), Expect = 0.93, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 35/123 (28%), Gaps = 20/123 (16%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q + E YT A + ++L Sbjct: 164 QGDFRTAADLFKTFAETYTGGQLTYEAHYLRGEALSRLGE-----------------TAN 206 Query: 212 RFQLVLANY---SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + L ++ D A EA+ +L A L EA ++ + R+P A T Sbjct: 207 AARAYLESFSGDPDGPRAPEALLKLGRALGDLRQTPEACVTLAEVGTRFPGSPSAAEAAT 266 Query: 269 LVK 271 ++ Sbjct: 267 TMQ 269 >gi|127512458|ref|YP_001093655.1| TPR repeat-containing protein [Shewanella loihica PV-4] gi|126637753|gb|ABO23396.1| Tetratricopeptide TPR_2 repeat protein [Shewanella loihica PV-4] Length = 240 Score = 42.8 bits (100), Expect = 0.057, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 43/129 (33%), Gaps = 22/129 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +Y +A E+I QYP S Y +G + + + Sbjct: 132 KERQYDEAIPAFREFIAQYPNSTYAANANYWLGQLLYNK--------GELAEAGKAFNTV 183 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V ++ S + + + KR + AA +Q V++ Y+++ Sbjct: 184 VNQFKESNKRGDSLVKLGMIAQ--------------KRNDNAAAKRYYQQVVSEYANSAA 229 Query: 226 AEEAMARLV 234 A A ++V Sbjct: 230 ARIAKQQMV 238 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 13/128 (10%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 YE+AV LKE+ + +A F + +P + A + + Y+ G+ +A Sbjct: 123 YERAVNLVLKERQYDEAIPAFREFIAQYPNSTYAANANYWLGQLLYNKGELAEAGKAFNT 182 Query: 120 YITQYPESKNVDYVYYLVG--MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + Q+ ES G + MI D A K +Y ++V Y NS + Sbjct: 183 VVNQFKESNK-------RGDSLVKLGMIAQKRNDNAAAK---RYYQQVVSEYANSAAARI 232 Query: 178 ARFYVTVG 185 A+ + Sbjct: 233 AKQQMVGL 240 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 16/128 (12%), Positives = 39/128 (30%), Gaps = 14/128 (10%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + + ++ +R + + +Y NS Y A +++ Sbjct: 121 ASYERAVNLVLKERQYDEAIPAFREFIAQYPNSTYAANANYWLGQLL------------- 167 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +GE A F V+ + ++ +++ +L A+ + Y Sbjct: 168 -YNKGELAEAGKAFNTVVNQFKESNKRGDSLVKLGMIAQKRNDNAAAKRYYQQVVSEYAN 226 Query: 260 GYWARYVE 267 AR + Sbjct: 227 SAAARIAK 234 >gi|315587165|gb|ADU41546.1| paralysed flagella protein [Helicobacter pylori 35A] Length = 803 Score = 42.8 bits (100), Expect = 0.057, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 188 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 247 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP ++ V Y V + + K ++Y RI+ Sbjct: 248 IKRSLLIDIGAKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 299 Query: 168 RYTNSPYVKGARFYVTV 184 Y +S Y A+ + + Sbjct: 300 EYKDSRYAPLAQMRLAI 316 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKRSLLIDIGAKWIKNYPTDPSIPEVLYY 276 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 277 VAKALDENNNYKQAMRYYKRILLEYKDSRYAPLAQMRLA 315 >gi|241998476|ref|XP_002433881.1| O-linked N-acetylglucosamine transferase, OGT, putative [Ixodes scapularis] gi|215495640|gb|EEC05281.1| O-linked N-acetylglucosamine transferase, OGT, putative [Ixodes scapularis] Length = 832 Score = 42.8 bits (100), Expect = 0.057, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 25/77 (32%), Gaps = 2/77 (2%) Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 + S + + ++ L+ E + +A + + P +SL Sbjct: 579 CAQLDSAGLKDPKTHESTKISALFNLGRLYADEGKYKEAIRVYQEAVAKMP-DHYQPQSL 637 Query: 98 L-MSAFVQYSAGKYQQA 113 M + G+Y +A Sbjct: 638 YNMMGEAYFKLGEYTEA 654 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYVALALMDEARE 248 +GR Y G+Y AI +Q +A D + +++ + EAY L EA Sbjct: 602 FNLGRLYADEGKYKEAIRVYQEAVAKMPD-HYQPQSLYNMMGEAYFKLGEYTEAER 656 >gi|148665269|gb|EDK97685.1| leprecan-like 1 [Mus musculus] Length = 540 Score = 42.8 bits (100), Expect = 0.057, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 33/68 (48%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P++++V L + + + + D D A+ + Sbjct: 146 FAYYRVGEYVKALECAKAYLMFHPDNEDV-----LDNVDFYESLLDDSTDP-ASIEARED 199 Query: 162 MSRIVERY 169 ++ V+R+ Sbjct: 200 LTAFVKRH 207 >gi|150398038|ref|YP_001328505.1| tetratricopeptide TPR_4 [Sinorhizobium medicae WSM419] gi|150029553|gb|ABR61670.1| Tetratricopeptide TPR_4 [Sinorhizobium medicae WSM419] Length = 420 Score = 42.8 bits (100), Expect = 0.057, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 69/216 (31%), Gaps = 46/216 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA--GKYQQAASLGEE 119 E+AV +F A + Q R P AR L G+Y +A E Sbjct: 194 ERAVALHAFGDFDGAEAGYRQLIRTVPGHVEARFRL-----AHLLNDVGEYDEA----EH 244 Query: 120 YIT-QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + P N D V + +G D Q + + ++ R+ Sbjct: 245 FYRTLLPTVPNPDDVLHWIG--------DTQMAQGFYRKASKTFQELLVRHPQ-----RG 291 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA------EEAMAR 232 + LA+ +R VAA F VL++ D H +E ++R Sbjct: 292 AVRYKLAVAHLASG---------RRDAAVAAFESFDDVLSD--DTNHVLCRAKAQEILSR 340 Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 L + + D + Q+ P WA + + Sbjct: 341 LKDV-AGMGEQDGEEQHD---QKGQPSLSWAPFGDE 372 >gi|320165966|gb|EFW42865.1| phosphoprotein [Capsaspora owczarzaki ATCC 30864] Length = 1153 Score = 42.8 bits (100), Expect = 0.058, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 41/109 (37%), Gaps = 12/109 (11%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 K +LFL N+ +A F + P +L+ A Y+ ++++A L + Sbjct: 139 KGMLFLLRNNYERAATQFRYVTAQNPAH---IPALMGQACAAYNLKQFKEALGLYRRVLR 195 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 P + V Y +G+ ++ + + R++E + Sbjct: 196 INPTG-SAAIVRYGIGVCLFKL--------KDLERAQLAFKRVLELVPD 235 >gi|255318933|ref|ZP_05360158.1| conserved hypothetical protein [Acinetobacter radioresistens SK82] gi|262378329|ref|ZP_06071486.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|255303950|gb|EET83142.1| conserved hypothetical protein [Acinetobacter radioresistens SK82] gi|262299614|gb|EEY87526.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 274 Score = 42.8 bits (100), Expect = 0.058, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 13/118 (11%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q K + M ++ + NS Y A F+ LA + + + Y A Sbjct: 169 QGGAKKAIAPMQNFIKNHPNSIYTGNAYFW-------LAEFNLAV-----EPPNYKEAKK 216 Query: 212 RFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + +V Y + A A+ +L A A + + YP+ A Y ++ Sbjct: 217 NYAIVADQYPTSAKASRALYQLYSIAKDVDKDTASANRFKNKLISTYPKSEEAGYFKS 274 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 44/149 (29%), Gaps = 21/149 (14%) Query: 36 VGWERQSSRDVYLDSVTDVRY--QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + SS +S T ++ Y A+ K+ KA ++ P + Sbjct: 133 IASNSTSSNLPQGNSSTQAPSDLEKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSIYT 192 Query: 94 RKSLLMSAF-------VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 + A Y K A QYP S Y + + + Sbjct: 193 GNAYFWLAEFNLAVEPPNYKEAKKNYAIVA-----DQYPTSAKASRALYQL----YSIAK 243 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYV 175 DV D T ++ ++++ Y S Sbjct: 244 DVDKD---TASANRFKNKLISTYPKSEEA 269 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 25/65 (38%), Gaps = 7/65 (10%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY----ITQYPES 127 N+ +A + + + +P + A ++L + A + I+ YP+S Sbjct: 210 NYKEAKKNYAIVADQYPTSAKASRALYQL-YSIAKDVDKDTA--SANRFKNKLISTYPKS 266 Query: 128 KNVDY 132 + Y Sbjct: 267 EEAGY 271 Score = 38.9 bits (90), Expect = 0.74, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 45/123 (36%), Gaps = 21/123 (17%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G ++A + + +I +P S Y+ ++ + + P K + + Sbjct: 167 YKQGGAKKAIAPMQNFIKNHPNSIYTGNAYFW--LAEFNLAVEPP----NYKEAKKNYAI 220 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL-VLANYSDA 223 + ++Y S A + + I + + A+ RF+ +++ Y + Sbjct: 221 VADQYPTSAKASRALYQL-----------YSIAK---DVDKDTASANRFKNKLISTYPKS 266 Query: 224 EHA 226 E A Sbjct: 267 EEA 269 >gi|254522146|ref|ZP_05134201.1| Polysaccharide deacetylase domain protein [Stenotrophomonas sp. SKA14] gi|219719737|gb|EED38262.1| Polysaccharide deacetylase domain protein [Stenotrophomonas sp. SKA14] Length = 890 Score = 42.8 bits (100), Expect = 0.058, Method: Composition-based stats. Identities = 18/136 (13%), Positives = 45/136 (33%), Gaps = 14/136 (10%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 +D + ++ ++ + +E+ + +A F + + P A ++ FV Y + Sbjct: 769 PASDRQRAQQANDRGLQLYREKQYDEAAAQFTEALKLRP--DFA-QAANNLGFVYYRQQR 825 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y +AA E + P +++ + D ++ Q + + Sbjct: 826 YAEAARWLENTLKIDPS----------RAVAHLNL-GDAYFNAGDKPKARQAYTTYLALQ 874 Query: 170 TNSPYVKGARFYVTVG 185 AR + Sbjct: 875 PQGSGAAQARAQLEKL 890 >gi|171320624|ref|ZP_02909644.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria MEX-5] gi|171094137|gb|EDT39224.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria MEX-5] Length = 285 Score = 42.8 bits (100), Expect = 0.058, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 34/100 (34%), Gaps = 4/100 (4%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 T+ F+ + L G + S Q E+ A L N A Sbjct: 3 RSVICTLAFAAVLPVLAGGCAPGIQTRPALSHKSDDPQAEL-RIADSALAGGNVELASTL 61 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + + P + +A + L V Y AG ++A L E+ Sbjct: 62 YGKVLARHPDS-LA--AQLGLGDVNYRAGDLERARILYEQ 98 >gi|15668984|ref|NP_247788.1| hypothetical protein MJ_0798 [Methanocaldococcus jannaschii DSM 2661] gi|2833599|sp|Q58208|Y798_METJA RecName: Full=TPR repeat-containing protein MJ0798 gi|1499620|gb|AAB98793.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 334 Score = 42.8 bits (100), Expect = 0.058, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 63/197 (31%), Gaps = 38/197 (19%) Query: 62 EKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +K LK A +YF + + K+L Y + + E+ Sbjct: 140 KKGYALLKLYKRDLAIKYFEKASEKDRNNY-----KALFGLGKSYYLMSDNKNSIKYFEK 194 Query: 120 YITQYPES-KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + P + ++Y +G Y + + + Y + +E + Sbjct: 195 VLELNPNDVEALEY----LGELYYE---------EDCEKAINYFKKALELKPDD------ 235 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + + +++ Y K +Y A+ F+ L + E+ + Y+ Sbjct: 236 ---IDLI--------LKVAFTYFKLKKYKHALKYFEKALKLNPNVFELEQIYESMGRIYI 284 Query: 239 ALALMDEAREVVSLIQE 255 L ++A E ++E Sbjct: 285 YLGEDEKAIECFEKLKE 301 >gi|113476308|ref|YP_722369.1| glycosyl transferase family protein [Trichodesmium erythraeum IMS101] gi|110167356|gb|ABG51896.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101] Length = 1486 Score = 42.8 bits (100), Expect = 0.058, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 64/202 (31%), Gaps = 25/202 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 A ++ + +A EY Q R P + L + GK +QA + ++ I Sbjct: 384 NLAKIYTQVNKSQEAAEYLYQAIRLEP-GKATAQDFLFTGNTLSENGKLEQAIACYQQLI 442 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + P S + + D Q +L LQ + Y + Sbjct: 443 SADPNSFEA-----------YEKLGDSLLKQGQLELSLQNYKNAQKLKP---YSTEIKQK 488 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 + G Y+ K+ + A+ ++ + NY + +L E + Sbjct: 489 IGEIY-------YRYGEYFQKKEKVEEAVKAYRQAIENYPQYDIPY---GKLGEVFSQQE 538 Query: 242 LMDEAREVVSLIQERYPQGYWA 263 +EA +V + P W Sbjct: 539 KWEEAVKVYEKASQIKPDNSWY 560 >gi|162453309|ref|YP_001615675.1| translation initiation factor IF-2, chloroplast precursor [Sorangium cellulosum 'So ce 56'] Length = 358 Score = 42.8 bits (100), Expect = 0.058, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 30/77 (38%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 R + + A L+ + + A Q FP +A++ ++ + +G AA Sbjct: 275 REELTLLGDARAALRRGDAAGALRIAEQARLRFPGGALAQEREALTIEALWQSGDRAAAA 334 Query: 115 SLGEEYITQYPESKNVD 131 ++ YP S +V Sbjct: 335 QRASAFLVAYPSSPHVP 351 >gi|304382533|ref|ZP_07365028.1| conserved hypothetical protein [Prevotella marshii DSM 16973] gi|304336364|gb|EFM02605.1| conserved hypothetical protein [Prevotella marshii DSM 16973] Length = 854 Score = 42.4 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 9/69 (13%), Positives = 21/69 (30%), Gaps = 4/69 (5%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E + N+ +A + + + + GV+ Y +A E Sbjct: 630 ENGDKEYAKGNYQQAIKDYEEVLK----GGVSADIYYNLGNAYYRIDNIPRAVLAYERAA 685 Query: 122 TQYPESKNV 130 P +++ Sbjct: 686 LLSPGDRDI 694 >gi|283781939|ref|YP_003372694.1| hypothetical protein Psta_4185 [Pirellula staleyi DSM 6068] gi|283440392|gb|ADB18834.1| hypothetical protein Psta_4185 [Pirellula staleyi DSM 6068] Length = 348 Score = 42.4 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 39/244 (15%), Positives = 77/244 (31%), Gaps = 24/244 (9%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL----FLKEQNFSKAYEYFN 81 + + G ++ ++ LD V Y A + +++A +Y+ Sbjct: 120 ALVAAKLAMTEGGDKAAAEKALLDFVRANSANWHFYAAAESLGDLAVSSGKYAEAAKYYG 179 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + PF K+ + +Y A + + I S + ++ Sbjct: 180 PIAA-APFGEYQMKANNSIGRALTAQKQYPDAITRFDAVID---GSLSTPEAAQQKTLAS 235 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL-AAKEVEIGRYY 200 + AT + ++ + L A +G Y Sbjct: 236 IGKAVCL----AATGKADEGLTIV----------NDIIAKNDPADVTLFARAYNALGNCY 281 Query: 201 LKRGEYVAAIPRF-QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 LK G+ A+ F + Y+D+E EA+ L + + D A + ++ERY Sbjct: 282 LKTGKNKDALQAFLHTDILFYADSESHAEALYHLSKLWATEEKPDRATAARTTLRERYSG 341 Query: 260 GYWA 263 WA Sbjct: 342 SVWA 345 >gi|312109539|ref|YP_003987855.1| hypothetical protein GY4MC1_0403 [Geobacillus sp. Y4.1MC1] gi|311214640|gb|ADP73244.1| Tetratricopeptide repeat protein [Geobacillus sp. Y4.1MC1] Length = 492 Score = 42.4 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 10/89 (11%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSA 101 D D D+ Q+E +A L L+++ F +A +P ++ A Sbjct: 141 EDENGDEQDDLITQQE---RARLLLEKEKFPEAIRLLEMIIDRYPEFWSAYN-----NLA 192 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNV 130 + G Q+A + E+ + + P + + Sbjct: 193 LAYFYNGNVQKAQEIIEQVLERNPGNLHA 221 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 80/214 (37%), Gaps = 32/214 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++K + ++++ KA +Y D A A + A V G+YQ + Sbjct: 24 YFKKGMQAYQQRDLYKAKKYLERAVQYDGNNASFALQ----LASVLAELGEYQASNQWL- 78 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + + +D +Y + ++A + ++Y + R + + + Sbjct: 79 -FKIIHELDETMDECFYFLANNFAHL--------GLFHEAMKYAETYLARDPDGHFAEDT 129 Query: 179 RFYVTVGR------------NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + + + + + +E R L++ ++ AI ++++ Y + A Sbjct: 130 EDLMELLKIDQEDENGDEQDDLITQQER--ARLLLEKEKFPEAIRLLEMIIDRYPEFWSA 187 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 +A AY + +A+E++ + ER P Sbjct: 188 YNNLAL---AYFYNGNVQKAQEIIEQVLERNPGN 218 >gi|255725838|ref|XP_002547845.1| serine/threonine-protein phosphatase T [Candida tropicalis MYA-3404] gi|240133769|gb|EER33324.1| serine/threonine-protein phosphatase T [Candida tropicalis MYA-3404] Length = 418 Score = 42.4 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 47/161 (29%), Gaps = 47/161 (29%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASL 116 ++ ++ +LK+ F +A E + + + P + ++ + Y A Sbjct: 8 KLKDQGNAYLKDHKFDQAIESYTEAIKLDPKNAIFYSNRAQV-----HIKLENYGLAIQD 62 Query: 117 GE-------EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + ++ YY G+S +++ K Q I+ + Sbjct: 63 CDSAISIDSNFLK----------AYYRKGVSLMAILQ--------YKQAQQNFKFILNKL 104 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 N N YLKR + AI Sbjct: 105 PNDKLTLENYK---QCTN------------YLKRQAFEKAI 130 >gi|332559127|ref|ZP_08413449.1| tol-pal system protein YbgF [Rhodobacter sphaeroides WS8N] gi|332276839|gb|EGJ22154.1| tol-pal system protein YbgF [Rhodobacter sphaeroides WS8N] Length = 274 Score = 42.4 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 10/126 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ-QAASLGEE 119 +++A L + +F A + F + + + ++ + G+ A + E Sbjct: 155 FDRAQEVLGQGDFRTAADLFKTFAETYTGGQLTYEAHYLRGEALSQLGETANAARAYLES 214 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P+ +G + D R T ++ + R+ SP A Sbjct: 215 FSGD-PDGPRAPEALLKLGRALG--------DLRQTPEACVTLAEVGTRFPGSPSAAEAA 265 Query: 180 FYVTVG 185 + Sbjct: 266 TTMQGL 271 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 35/123 (28%), Gaps = 20/123 (16%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q + E YT A + +QL Sbjct: 164 QGDFRTAADLFKTFAETYTGGQLTYEAHYLRGEALSQLGE-----------------TAN 206 Query: 212 RFQLVLANY---SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + L ++ D A EA+ +L A L EA ++ + R+P A T Sbjct: 207 AARAYLESFSGDPDGPRAPEALLKLGRALGDLRQTPEACVTLAEVGTRFPGSPSAAEAAT 266 Query: 269 LVK 271 ++ Sbjct: 267 TMQ 269 >gi|322436089|ref|YP_004218301.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium sp. MP5ACTX9] gi|321163816|gb|ADW69521.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium sp. MP5ACTX9] Length = 730 Score = 42.4 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 61/204 (29%), Gaps = 34/204 (16%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 T+ + + ++ +V +T+V + L F++A E F+Q Sbjct: 477 TVTLASGSLHIDAGVNEAKGEVLPAGLTEVLRWN---NYGIGMLDRLQFAEAVEAFHQVL 533 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + P + A +YS G+Y +A + + P Y G+ Sbjct: 534 KLDP--KYQP-GYVNVAVGEYSRGRYDEALRWLDRGLQMDPADAR---AMYFKGLCL--- 584 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 Q + + + ++Y +L G Y+ R Sbjct: 585 -----RWQTHFDEAIAVLEPVAKQYP----------RFRQVHQEL-------GYVYMVRR 622 Query: 205 EYVAAIPRFQLVLANYSDAEHAEE 228 + A ++ VL D A Sbjct: 623 RFPEAKAEYEAVLKIDPDDPVAHR 646 >gi|227538150|ref|ZP_03968199.1| possible outer membrane protein [Sphingobacterium spiritivorum ATCC 33300] gi|227241993|gb|EEI92008.1| possible outer membrane protein [Sphingobacterium spiritivorum ATCC 33300] Length = 628 Score = 42.4 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 41/122 (33%), Gaps = 19/122 (15%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYS 106 + +++Y A L++ + A E + +F + + Sbjct: 20 KPSGNAKAQQLYTSANRHLQKGEYPPAIELLKEALKIDGNFA-SAYQT-----LGDLYRK 73 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 A +Y++A + E+ +T PE L ++Y I + K L Y+ Sbjct: 74 ADQYEEARQMYEKVLTTDPE---------LTPLTYFG-IGESSLFTGHYKEALNYLETYK 123 Query: 167 ER 168 + Sbjct: 124 NK 125 >gi|227537547|ref|ZP_03967596.1| gliding motility-related protein; TPR repeat-containing protein [Sphingobacterium spiritivorum ATCC 33300] gi|227242599|gb|EEI92614.1| gliding motility-related protein; TPR repeat-containing protein [Sphingobacterium spiritivorum ATCC 33300] Length = 1023 Score = 42.4 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 10/79 (12%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + Y +A E ++ +YP + VY+ S +M + L Sbjct: 586 IYRDY-TKDPTEAIKAYENFLDRYPNTPAAAEVYF----SLYRMYEGIDK-----TKSLA 635 Query: 161 YMSRIVERYTNSPYVKGAR 179 Y ++++ + N+ + A+ Sbjct: 636 YKNKLITLFPNTIHAHVAQ 654 >gi|329942368|ref|ZP_08291178.1| tetratricopeptide repeat family protein [Chlamydophila psittaci Cal10] gi|332287010|ref|YP_004421911.1| tetratricopeptide repeat protein [Chlamydophila psittaci 6BC] gi|313847606|emb|CBY16594.1| conserved hypothetical protein [Chlamydophila psittaci RD1] gi|325506936|gb|ADZ18574.1| tetratricopeptide repeat protein [Chlamydophila psittaci 6BC] gi|328815278|gb|EGF85266.1| tetratricopeptide repeat family protein [Chlamydophila psittaci Cal10] gi|328914240|gb|AEB55073.1| type III secretion chaperone, putative [Chlamydophila psittaci 6BC] Length = 335 Score = 42.4 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 65/201 (32%), Gaps = 34/201 (16%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + +Y KAV+ N +A R P K+ + ++ ++ + Sbjct: 141 DPWNPQSLYNKAVVLTDMNNEQEAIVLLETTVRKNPL-YW--KAWIKLGYLLSRHKQWDK 197 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A E + P ++ +Y +G+ Y + + T+L L+ + Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQEAL------ 240 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 + A +G Y+ + A F L + EH E + Sbjct: 241 -----------FLNEEDADAHFYVGLAYMDLKQNRQASDAFHRALGI--NLEH-ERSHYL 286 Query: 233 LVEAYVALALMDEAREVVSLI 253 L Y ++A + +S + Sbjct: 287 LGYLYHMEGQFEKAEKELSFL 307 >gi|206603339|gb|EDZ39819.1| Protein of unknown function [Leptospirillum sp. Group II '5-way CG'] Length = 231 Score = 42.4 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 71/226 (31%), Gaps = 53/226 (23%) Query: 50 SVTDVRYQREVYEKA-VLFLKEQNFSKAY----EYFNQCSRDFPFAGVARKSLLMSAFVQ 104 S + + YE + L + KA + + ++ + A Sbjct: 17 SPSSPLAGKAFYELGRMDDLYGNDPQKAAGHYMKSLENLKD----GSIRQRVSIDLATDL 72 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---YDQRA------- 154 GK +A ++ L G+ + ++ +D A Sbjct: 73 EHLGKPDEALAI-------------------LRGLDGSNLLSTFEPRVWDLTARILEHEG 113 Query: 155 -TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 + L Y ++ +R +S + A+F + + LA ++ +R + RF Sbjct: 114 HYREALGYYKKVSDREPDSFRGQKAQFKIGLL-ESLA-SDLPSA----QRD-----LGRF 162 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + Y D+ A L + L +A ++ I+ YP Sbjct: 163 ---VKRYPDSPFTPVARFNLALTWDRLGDHQKALSILESIKGSYPN 205 >gi|75910689|ref|YP_324985.1| hypothetical protein Ava_4492 [Anabaena variabilis ATCC 29413] gi|75704414|gb|ABA24090.1| TPR repeat protein [Anabaena variabilis ATCC 29413] Length = 605 Score = 42.4 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 43/128 (33%), Gaps = 18/128 (14%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAF 102 D L S + Y + + N+ +A Q + P+ A + + + Sbjct: 135 DPLLASNINEDIANAYYYRGLHNSDHGNYQEAIIDLQQALQWHPYFAAAYSIRGNI---- 190 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y G+Y+QA + E + N+ Y G +Y + A + + Sbjct: 191 -YYKLGEYRQAIADHERAVQL---DPNLAEAYQNRGNAYYAL--------GAYQKAIADY 238 Query: 163 SRIVERYT 170 +R +E Sbjct: 239 NRTLEINP 246 Score = 35.5 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 62/208 (29%), Gaps = 35/208 (16%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 +++ A +FN P A ++ +Y + A + ++ + P Sbjct: 51 KDYQGAIAFFNLAVEINP--NYA-QAYYHRGNARYCLADFTAAIADYDQALQINPT--FA 105 Query: 131 DYVYYLVGMSYAQM----------IRDVPYDQRATKL-----MLQYMSRIVERYTNSPYV 175 +Y YY G +Y I + +D Y R + + Y Sbjct: 106 EY-YYCRGNAYLAQGDYDQAIANYISTIEFDPLLASNINEDIANAYYYRGLHNSDHGNY- 163 Query: 176 KGARFYVTVGRNQLAAKEVEIGRY------YLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 + + + L Y Y K GEY AI + + + EA Sbjct: 164 ---QEAIIDLQQALQWHPYFAAAYSIRGNIYYKLGEYRQAIADHERAVQLDPN---LAEA 217 Query: 230 MARLVEAYVALALMDEA-REVVSLIQER 256 AY AL +A + ++ Sbjct: 218 YQNRGNAYYALGAYQKAIADYNRTLEIN 245 >gi|16332208|ref|NP_442936.1| hypothetical protein slr0751 [Synechocystis sp. PCC 6803] gi|2496796|sp|Q04737|Y751_SYNY3 RecName: Full=TPR repeat-containing protein slr0751 gi|217095|dbj|BAA01277.1| ORF248 [Synechocystis sp. PCC 6803] gi|1653838|dbj|BAA18748.1| slr0751 [Synechocystis sp. PCC 6803] Length = 248 Score = 42.4 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 10/105 (9%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + L+ ++Q+ A + F Q P K+ A + G+Y QA + + Sbjct: 134 NRGNLYSQQQDHHTAIQDFTQAITYDP-NRY--KAYYNRANSYFQLGQYAQAIADYNRVL 190 Query: 122 TQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 P DY Y G+++ Q + Q Y++R Sbjct: 191 VLRP-----DYINAIYNRGLAHFQAGQLDSSRQDLLFSAQAYLNR 230 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 83/271 (30%), Gaps = 42/271 (15%) Query: 1 MSAVLGRAICIF---EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVR-Y 56 M LG C+ + + L + + ++ V + + V + Sbjct: 1 MKVNLGNCFCLSLSQKKFPLPLASLLVNVPLALMVALGMNLALERPGVTGEMVVLESPIA 60 Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ + V + N+++A E F+ P + G QA + Sbjct: 61 PEAIFAQGVKAGEAGNYAEAVELFSVVLNLSPDSPETH---YNRGLAWERLGNVDQAIAD 117 Query: 117 GEEYITQYPESKNVDYVYYL-----VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 I YY+ G Y+Q Q+ +Q ++ + N Sbjct: 118 YGRSIAL--------DRYYIPPYINRGNLYSQ--------QQDHHTAIQDFTQAITYDPN 161 Query: 172 --SPYVKGARFYVTVGRNQLAAKEVEIGRYY---LKRGEYVAAIPRFQLVLANYS--DAE 224 Y A Y QL I Y + R +Y+ AI + LA++ + Sbjct: 162 RYKAYYNRANSYF-----QLGQYAQAIADYNRVLVLRPDYINAI--YNRGLAHFQAGQLD 214 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + + + +AY+ E + + E Sbjct: 215 SSRQDLLFSAQAYLNRGDRRSYLEALDQMSE 245 >gi|282899497|ref|ZP_06307462.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] gi|281195604|gb|EFA70536.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] Length = 280 Score = 42.4 bits (99), Expect = 0.061, Method: Composition-based stats. Identities = 19/167 (11%), Positives = 43/167 (25%), Gaps = 23/167 (13%) Query: 22 FALTIFFSIAVCFLVGWERQSS-------RDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74 F + +F + V R + E Y + NF Sbjct: 17 FTILVFTGLTGILCVSCNRNQDLLVTEIGVNPPKRPTRKTSGAGEFYLQGQNQHSRGNFQ 76 Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 A +++ + A + + ++A + + + P Y Sbjct: 77 AAIAAYSKSISLN--SDYAP-AFKARGLAYFDLNNKERAINDYNQSLQINPNDPET---Y 130 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 G + A + DQ+ ++ + + N Y + Sbjct: 131 NYRGNARASLG-----DQKG---AIEDYNEAIRLSPN--YAEAFNNR 167 >gi|256082563|ref|XP_002577524.1| heat shock protein 70 [Schistosoma mansoni] gi|238662846|emb|CAZ33762.1| heat shock protein 70 (hsp70)-interacting protein, putative [Schistosoma mansoni] Length = 270 Score = 42.4 bits (99), Expect = 0.061, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 46/137 (33%), Gaps = 25/137 (18%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +A+ + + + + A + F + + P + AR++ K A + ++ Sbjct: 107 EAMAKMSDGDLTGAVDLFTEAIKLNPQSSLFHARRAS-----CFVRMKKPSHAIADCDKA 161 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I+ P+S Y + G + +MI + Q + ++ Y A Sbjct: 162 ISLNPDSAQ-PYKW--RGFAN-KMI-------GNWEAAYQDLQTSLKL----DYTDDANE 206 Query: 181 YVTVG---RNQLAAKEV 194 + ++ + Sbjct: 207 AIKEIEPKHKRIFEHNM 223 >gi|253688744|ref|YP_003017934.1| Tetratricopeptide TPR_2 repeat protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755322|gb|ACT13398.1| Tetratricopeptide TPR_2 repeat protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 389 Score = 42.4 bits (99), Expect = 0.061, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 59/180 (32%), Gaps = 28/180 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ + +A E FNQ + F A + L+ + + + A E+ + Sbjct: 114 GRDYMAAGLYDRAEESFNQLVDEEDFRRSALQ-QLLQIY--QATSDWPAAIDAAEKLVKM 170 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 + VD ++ ++ M D D L + Sbjct: 171 GKDQLRVDIAHFYCELALLAMGSD-DLD-----KALTLL-----------------KKGA 207 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 NQ A + +GR Y+ + +Y A+ + VL D E E + L E Y L Sbjct: 208 AADNQCARASIMMGRIYMAQQDYSRAVEALRQVLD--QDKELVSETLPMLQECYQHLDKP 265 >gi|332257107|ref|XP_003277657.1| PREDICTED: serine/threonine-protein phosphatase 5 isoform 1 [Nomascus leucogenys] Length = 499 Score = 42.4 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 50/166 (30%), Gaps = 34/166 (20%) Query: 40 RQSSRDVYLDSVTDV---RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VAR 94 R + D + E+ +A + K +++ A ++++Q P Sbjct: 8 RTDCAEPPRDEPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGN 67 Query: 95 KSLLMSAF----VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 +S A+ Y+ G +A L ++YI YY S + Sbjct: 68 RS---LAYLRTECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL----- 109 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + L+ +V+ + A+ + K E Sbjct: 110 ---GKFRAALRDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149 >gi|324513857|gb|ADY45676.1| Tetratricopeptide repeat protein 1 [Ascaris suum] Length = 299 Score = 42.4 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 37/120 (30%), Gaps = 13/120 (10%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS--LLMSAFVQYSAGKYQQAASLGEE 119 + E ++ +A E + + P + ++ L A + A E Sbjct: 134 NEGNRKFGEGSWQEAIELYTKALERCPLVYTSERAVYLSNRAACHIKLSDWDAAIKDCTE 193 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-YVKGA 178 I + N D YAQ + L ++++Y + YV+ A Sbjct: 194 AIKL--GAPN-DKPLERRAHCYAQTEENYD-------NALHDYDELIKKYPDKKVYVEKA 243 >gi|282895991|ref|ZP_06304022.1| TPR repeat protein [Raphidiopsis brookii D9] gi|281199101|gb|EFA73971.1| TPR repeat protein [Raphidiopsis brookii D9] Length = 805 Score = 42.4 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 22/67 (32%), Gaps = 5/67 (7%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++A L + + A + + + P L F+ +Y++A + Sbjct: 581 QEAEELLSQNRYEDALSIYEKITSIQPDHGEY----WLKRGFILNKLKRYKEAIGAYNQV 636 Query: 121 ITQYPES 127 I P Sbjct: 637 IRINPAH 643 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 51/136 (37%), Gaps = 26/136 (19%) Query: 49 DSVTDVRYQREVY--EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQ 104 + T+++ + V + + ++ +N+ +A F++ P F ++ + Sbjct: 668 NKATEIKPEESVAWLNRGLSLVELENYEEAISSFDKALEIQPSSFKIWDKR-----GYTL 722 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 G+ ++A + + + P DY Y YA Q+ +L L + Sbjct: 723 VRLGRDEEAITNFNKALELNP-----DYGSALYHKSACYAL--------QKNVELALVNL 769 Query: 163 SRIVERYTNSPYVKGA 178 + ++ + Y + A Sbjct: 770 QQAIKHKPS--YREDA 783 >gi|189053397|dbj|BAG35563.1| unnamed protein product [Homo sapiens] Length = 499 Score = 42.4 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102 + ++ E+ +A + K +++ A ++++Q P +S A+ Sbjct: 18 EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLC 74 Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y+ G +A L ++YI YY S + + L Sbjct: 75 TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 116 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + +V+ + A+ + K E Sbjct: 117 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149 >gi|169832341|ref|YP_001718323.1| TPR repeat-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169639185|gb|ACA60691.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Desulforudis audaxviator MP104C] Length = 191 Score = 42.4 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 33/95 (34%), Gaps = 13/95 (13%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 ++ ++ + F + ++ L A + G+++QA E + P Sbjct: 86 DYERSIQLFEEVLAL---EADNQRVRLDLAEMYLQLGEHEQAIGQLEALLEINPGHHR-- 140 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 YL G++ D P ++ + R + Sbjct: 141 -ALYLYGIALGFGREDYP-------EAIRALERFL 167 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 8/61 (13%), Positives = 19/61 (31%), Gaps = 4/61 (6%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-YSAGKYQQAASLGEEYIT 122 A ++L+ +A P ++L + + Y +A E ++ Sbjct: 112 AEMYLQLGEHEQAIGQLEALLEINPGHH---RALYLYGIALGFGREDYPEAIRALERFLA 168 Query: 123 Q 123 Sbjct: 169 L 169 >gi|88799631|ref|ZP_01115207.1| hypothetical protein MED297_04577 [Reinekea sp. MED297] gi|88777716|gb|EAR08915.1| hypothetical protein MED297_04577 [Reinekea sp. MED297] Length = 177 Score = 42.4 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 56/168 (33%), Gaps = 22/168 (13%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR-EVYEKAVLFLKEQNFSKAYEYFNQC 83 T+F + ++++ +T + E ++ V + + ++ A N Sbjct: 24 TLFVELGEATTAAQAEPIEQEIWSQWMTGPNEEATEALKRVVTNMNQGEWTLAMVRLNDL 83 Query: 84 SRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + P + +++ L Y G ++ + E+ + Q P + +G+ Sbjct: 84 INENPTYTEAWNKRATL-----HYMLGNADESIADIEQTLKQEPRHFG---AWSGLGLIL 135 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + + L +++ Y SP +R V QL Sbjct: 136 ERR--------GQLRAALTAHREVLKLYPTSP---SSRQRVESLEAQL 172 >gi|113476172|ref|YP_722233.1| hypothetical protein Tery_2560 [Trichodesmium erythraeum IMS101] gi|110167220|gb|ABG51760.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101] Length = 309 Score = 42.4 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 52/158 (32%), Gaps = 40/158 (25%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 LY+F +I + V FL S + + ++V+ + + + +N+ +A E Sbjct: 4 LYRFLFSIIIVVTVLFL----SFSPPMKIATANLKIGNAKKVFTEGITNSENKNYEQAVE 59 Query: 79 YF-NQCSRDFPF-AGVARK-----------------------------SLLMSAFVQYSA 107 F F F + + + + L Sbjct: 60 NFTKAIELKFKFASAYSNRCLVYLQWGKYEEAIADCTEAIKINPKNIEANLNLGLAYDKI 119 Query: 108 GKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQM 144 G YQQA + + + ++ D+ Y G++ ++ Sbjct: 120 GNYQQAIAEYNQVL----NHQHNDFRALYNRGLANFEL 153 >gi|332828930|gb|EGK01613.1| hypothetical protein HMPREF9455_02145 [Dysgonomonas gadei ATCC BAA-286] Length = 1209 Score = 42.4 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 54/164 (32%), Gaps = 20/164 (12%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 A I++YP + N++ +YY + + Y Q+ Y +++ Sbjct: 596 KLEDLPLAIETFNADISRYPATPNLEEIYYQLLLIYMQLGDQDML--------AVYRNKL 647 Query: 166 VERYTNSPYVKGARF--------YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + + Y ++ + ++ L E +R + +Q + Sbjct: 648 LTEFPQGQYAIPLSEPDFEWNFRHMPLLQDSL-YNEAYAA---YQRADVQIVRNNYQAMK 703 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A Y + + +Y + + ++ + +++P+ Sbjct: 704 AKYPFTDMMPKFAFLNALSYAQTRDVKALGDNLAEVVQKFPKAD 747 Score = 35.9 bits (82), Expect = 6.4, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 54/161 (33%), Gaps = 29/161 (18%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA----------------- 93 + Y+ +++++ + Y N+ +FP A Sbjct: 615 PATPNLEEIYYQLLLIYMQLGDQDMLAVYRNKLLTEFPQGQYAIPLSEPDFEWNFRHMPL 674 Query: 94 -RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + SL A+ Y Q + + +YP + + +L +SYAQ D Sbjct: 675 LQDSLYNEAYAAYQRADVQIVRNNYQAMKAKYPFTDMMPKFAFLNALSYAQ-----TRDV 729 Query: 153 RATKLMLQYMSRIVERYTN---SPYVKGARFYVTVGRNQLA 190 +A ++ +V+++ +P + GR L+ Sbjct: 730 KALG---DNLAEVVQKFPKADVTPLATEILERIKEGRIILS 767 >gi|325111315|ref|YP_004272383.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] gi|324971583|gb|ADY62361.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] Length = 448 Score = 42.4 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 77/235 (32%), Gaps = 45/235 (19%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKS 96 Q+ D L D Y + + +L++ N+SKA E F + KS Sbjct: 177 GQAINDFNLAIRYDKEYIDAMNNRGYAYLEQGNYSKAIENFTDAIALDETY------VKS 230 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPE------SKNVDYVYYLVGMSYAQMIRDVPY 150 F G + A + I P + + ++ + V Sbjct: 231 YNNRGFTHMKVGDNEAAVKDFSKAIELSPNVVKHYLHRRDAW------LAMGNQEKAVA- 283 Query: 151 DQRATKLMLQYM--SRIVERYTNS-----PYVK--GARFYVTVGRNQLAAKE-----VEI 196 DQ+ + Q + SR ++R + K A L+ E + Sbjct: 284 DQKQAQWTQQLLLISRRMQREPKNAELLVERAKHFVAAERFEEAFEDLSQAEKMDQDLAA 343 Query: 197 -----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 Y R EY AAI L DA+H A++ +AY+A +DEA Sbjct: 344 VHTCRAEIYYGREEYKAAIESCTKAL----DADHDFSALSLRGDAYMATGKLDEA 394 >gi|291566092|dbj|BAI88364.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 1651 Score = 42.4 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 39/213 (18%) Query: 64 AVLFLKEQNFSKAYEYFNQC-----SRDFPFAGVARKSLLMSAFVQYSAGKY-------Q 111 A L+ + ++F KA + + + + Y Q Sbjct: 264 ANLYQQTEDFEKAIAVLEKRLAIVRESQDKSGEYGLLYQIGGVY-YHQLKDYNGAFDYYQ 322 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGM------------SYAQ-MIRDVPYD---QRAT 155 A + + + + P S+ YY++G+ SY + I D Q+ Sbjct: 323 SALEVAQGFTEKQPLSE--ANAYYMLGLVSDSLNKSEDGISYFEKAIGYYEQDDSQQQWF 380 Query: 156 KLMLQYMSRIVERYTNSPY-VKGARFYVTVG---RNQLAAKEV--EIGRYYLKRGEYVAA 209 L Y+ ++ E+ +S + A + + ++ + +IG Y ++ Y A Sbjct: 381 VKSLDYIEKLSEKIGDSEKLIAVAEKRLILLGEGEDKSGKYSLVYKIGGLYYQQKNYSRA 440 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 +Q L E AY L L Sbjct: 441 FDYYQSALEVAQG--LTERQPLYEANAYYMLGL 471 >gi|194211573|ref|XP_001490817.2| PREDICTED: similar to FK506-binding protein 4 (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (p59 protein) (HSP-binding immunophilin) (HBI) (FKBP52 protein) (52 kDa FK506-binding protein) (FKBP59) [Equus caballus] Length = 560 Score = 42.4 bits (99), Expect = 0.062, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 44/144 (30%), Gaps = 26/144 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVA----RKSL-------LMSAFVQYSAGK 109 E+ ++ KE + +A + + + + + +K+ L A Sbjct: 376 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSDEDVQKAQALRLASHLNLAMCHLKLQA 435 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + D ++++ Y Sbjct: 436 FSAAIESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 484 Query: 170 TNSPYVKGARFYV--TVGRNQLAA 191 S A+ + R QLA Sbjct: 485 P-SNKAAKAQLAICQQRIRKQLAR 507 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 32/80 (40%), Gaps = 2/80 (2%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYF 80 L ++A+C L ++ + ++ D ++ ++ + L +F A F Sbjct: 418 LRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADF 477 Query: 81 NQCSRDFPFAGVARKSLLMS 100 + + +P + A K+ L Sbjct: 478 QKVLQLYP-SNKAAKAQLAI 496 >gi|332840993|ref|XP_001147729.2| PREDICTED: intraflagellar transport protein 88 homolog isoform 4 [Pan troglodytes] Length = 833 Score = 42.4 bits (99), Expect = 0.063, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 85/303 (28%), Gaps = 64/303 (21%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 437 QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 496 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 497 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 549 Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157 ++ + +N V Y + Y Q++ +P D + Sbjct: 550 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 609 Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196 QY + ++ + + A Y + + ++ + Sbjct: 610 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 669 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSL 252 + + G Q L Y D E + LV L L D A+E Sbjct: 670 ASCFRRSGN-------SQKALDTYKDTHRKFPENVECLRFLVRLCTDLGLKD-AQEYARK 721 Query: 253 IQE 255 ++ Sbjct: 722 LKR 724 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KAV +L+++++++A E + + V + + + Y + QA+S Sbjct: 429 NKAVTYLRQKDYNQAVEILKVLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 486 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 487 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 542 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y Sbjct: 543 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 578 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AI V++ +++L E Y +A + Sbjct: 579 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 617 >gi|297738576|emb|CBI27821.3| unnamed protein product [Vitis vinifera] Length = 1091 Score = 42.4 bits (99), Expect = 0.063, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 77/249 (30%), Gaps = 76/249 (30%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A + +S + + + + + +P A + + Y G++++A + + Sbjct: 168 QACVEFNRGRYSDSLDLYKRALQVYPDCPAAVRVGIGL--CCYKLGQFEKARKAFQRVLQ 225 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 PE+ LV + + D + ++ M R E Y Y A Y+ Sbjct: 226 LDPENVEA-----LVALGIMDLH---TNDASGIRKGMEKMQRAFEIYP---YCAMALNYL 274 Query: 183 T---------VGRNQLAAKEVEI---------------------------GRYYL----- 201 QL + + G YY+ Sbjct: 275 ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 334 Query: 202 -------------------KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 K G++ +++ F+ VL Y + EA+ L YV L Sbjct: 335 SNKPHDFVLPYYGLGQVQLKLGDFRSSLSNFEKVLEVYPE---NCEALKALGHIYVQLGQ 391 Query: 243 MDEAREVVS 251 ++A+E + Sbjct: 392 TEKAQEYLR 400 >gi|260554754|ref|ZP_05826975.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606] gi|260411296|gb|EEX04593.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606] Length = 294 Score = 42.4 bits (99), Expect = 0.063, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 17/120 (14%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAA 209 Q K + M ++ + NS Y A F++ ++L Y A Sbjct: 189 QGGAKKAIAPMQNFIKNHPNSIYTGNAYFWL--------------AEFHLATDPVNYNEA 234 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + +V Y ++ A A+ +L A A + + + +Y + A++ Sbjct: 235 KKNYNVVANQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKNKLLSQYSKSEEAKFFNK 294 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 42/122 (34%), Gaps = 9/122 (7%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAA 114 ++ Y A+ K+ KA ++ P + + A + Y +A Sbjct: 176 EKAAYTVALDAYKQGGAKKAIAPMQNFIKNHPNSIYTGNAYFWLAEFHLATDPVNYNEAK 235 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 QYP S Y + + +DV + T QY ++++ +Y+ S Sbjct: 236 KNYNVVANQYPNSSKAPRALYQL----YSIAKDVD---KNTVSANQYKNKLLSQYSKSEE 288 Query: 175 VK 176 K Sbjct: 289 AK 290 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 8/79 (10%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMS 163 Y G ++A + + +I +P S G +Y + + D + + Sbjct: 187 YKQGGAKKAIAPMQNFIKNHPNSIYT-------GNAYFWLAEFHLATDPVNYNEAKKNYN 239 Query: 164 RIVERYTNSPYVKGARFYV 182 + +Y NS A + + Sbjct: 240 VVANQYPNSSKAPRALYQL 258 >gi|322833962|ref|YP_004213989.1| peptidase M48 Ste24p [Rahnella sp. Y9602] gi|321169163|gb|ADW74862.1| peptidase M48 Ste24p [Rahnella sp. Y9602] Length = 512 Score = 42.4 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 35/132 (26%), Gaps = 34/132 (25%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREV---YEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 + + G E D YL +++ + ++ Y A+ F K + + +A P Sbjct: 305 ILGMYGSESFPLSDDYLLKLSNGNIREQLAAKYGHALQFYKAKKYDQARTILEPLLAQNP 364 Query: 89 FAGV--------------ARKS-----------------LLMSAFVQYSAGKYQQAASLG 117 A ++ L A K A + Sbjct: 365 GNEWLLDLATDNDIDSKRAPQAIARLEQAGAASSANAVLQLNLANAYLEGAKPANAMKIL 424 Query: 118 EEYITQYPESKN 129 Y YP N Sbjct: 425 NRYTFNYPGDPN 436 >gi|147781154|emb|CAN67377.1| hypothetical protein VITISV_017914 [Vitis vinifera] Length = 788 Score = 42.4 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 77/249 (30%), Gaps = 76/249 (30%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A + +S + + + + + +P A + + Y G++++A + + Sbjct: 168 QACVEFNRGRYSDSLDLYKRALQVYPDCPAAVRVGIGL--CCYKLGQFEKARKAFQRVLQ 225 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 PE+ LV + + D + ++ M R E Y Y A Y+ Sbjct: 226 LDPENVEA-----LVALGIMDLH---TNDASGIRKGMEKMQRAFEIYP---YCAMALNYL 274 Query: 183 T---------VGRNQLAAKEVEI---------------------------GRYYL----- 201 QL + + G YY+ Sbjct: 275 ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 334 Query: 202 -------------------KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 K G++ +++ F+ VL Y + EA+ L YV L Sbjct: 335 SNKPHDFVLPYYGLGQVQLKLGDFRSSLSNFEKVLEVYPE---NCEALKALGHIYVQLGQ 391 Query: 243 MDEAREVVS 251 ++A+E + Sbjct: 392 TEKAQEYLR 400 >gi|145553124|ref|XP_001462237.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124430075|emb|CAK94864.1| unnamed protein product [Paramecium tetraurelia] Length = 2950 Score = 42.4 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 26/210 (12%), Positives = 70/210 (33%), Gaps = 43/210 (20%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGEEYITQYPES 127 ++ F +A + + + + + + L A Y +++A ++ ++ P+ Sbjct: 2749 QEQFEQAIQIYEEI------SHLDQNEELEYNMANCYYMKNDFEEAVLHYQKALSINPD- 2801 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-----YV------- 175 ++ YY +G +Y M + + L+ R+V+ Y Sbjct: 2802 -KIE-CYYNLGNTYCIMEK--------FEEALECFERVVKDDPKHSAAFYNYANTFFVLQ 2851 Query: 176 --KGARFYVTVGRNQLAAK---EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 + A Y + + Y+++G+ AA + + + Sbjct: 2852 DYENAAKYFEKAVELQPENVDWRNYVAQLYIEKGDLNAAKRHLDESMRLQPR---NPDTL 2908 Query: 231 ARLVEAYVALA----LMDEAREVVSLIQER 256 R Y + + +A++ ++L + Sbjct: 2909 VRYANYYYQIGNYKEAIQKAKQTLALDEAN 2938 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 32/92 (34%), Gaps = 11/92 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKY 110 D ++ Y A F Q++ A +YF + P R + L G Sbjct: 2833 DPKHSAAFYNYANTFFVLQDYENAAKYFEKAVELQPENVDWRNYVAQL-----YIEKGDL 2887 Query: 111 QQAASLGEEYITQYPESKN--VDYV--YYLVG 138 A +E + P + + V Y YY +G Sbjct: 2888 NAAKRHLDESMRLQPRNPDTLVRYANYYYQIG 2919 >gi|62898005|dbj|BAD96942.1| protein phosphatase 5, catalytic subunit variant [Homo sapiens] Length = 499 Score = 42.4 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102 + +R E+ +A + K +++ A ++++Q P +S A+ Sbjct: 18 EPPADGALRRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 74 Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y+ G +A L ++YI YY S + + L Sbjct: 75 TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 116 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + +V+ + A+ + K E Sbjct: 117 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149 >gi|160874902|ref|YP_001554218.1| tol-pal system protein YbgF [Shewanella baltica OS195] gi|160860424|gb|ABX48958.1| tol-pal system protein YbgF [Shewanella baltica OS195] gi|315267139|gb|ADT93992.1| tol-pal system protein YbgF [Shewanella baltica OS678] Length = 249 Score = 42.4 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 22/124 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 KY A +I QYP+S Y +G Q + Sbjct: 139 KERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFA--------EAKQAFKTV 190 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V+R+++S + + + K G+ A +Q V+ +Y+++ Sbjct: 191 VDRFSDSNKRGDSLVKLGMIAE--------------KTGDKAGATQYYQQVVKDYANSAA 236 Query: 226 AEEA 229 A A Sbjct: 237 ARIA 240 Score = 38.9 bits (90), Expect = 0.71, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 17/131 (12%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL--- 116 YE AV LKE+ + A F + +P + A + + ++ ++ +A Sbjct: 130 YESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQAFKT 189 Query: 117 -GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + + + MI + D+ QY ++V+ Y NS Sbjct: 190 VVDRFSDSNKRGDS---------LVKLGMIAEKTGDKAG---ATQYYQQVVKDYANSAAA 237 Query: 176 KGARFYVTVGR 186 + A+ + + Sbjct: 238 RIAQQQLAAIK 248 >gi|1122931|gb|AAB60384.1| serine-threonine phosphatase [Homo sapiens] Length = 491 Score = 42.4 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102 + ++ E+ +A + K +++ A ++++Q P +S A+ Sbjct: 10 EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 66 Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y+ G +A L ++YI YY S + + L Sbjct: 67 TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 108 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + +V+ + A+ + K E Sbjct: 109 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 141 >gi|81299834|ref|YP_400042.1| TPR repeat-containing protein [Synechococcus elongatus PCC 7942] gi|81168715|gb|ABB57055.1| TPR repeat [Synechococcus elongatus PCC 7942] Length = 156 Score = 42.4 bits (99), Expect = 0.064, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 43/131 (32%), Gaps = 21/131 (16%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++A + + ++A + + P FA R+++L Y G+Y ++ + Sbjct: 45 QRAEVLMTAGEMAEAEQLLSDLINQLPDFAEAWNRRAVL-----HYLQGRYSESLEDCDR 99 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I P + G+S A + + + +E Y + Sbjct: 100 VIDLNPIHFG---ALHGKGLSLAAL--------GQYREAITAFRAALEIQP---YALINQ 145 Query: 180 FYVTVGRNQLA 190 + +L+ Sbjct: 146 RLILECTARLS 156 >gi|325110736|ref|YP_004271804.1| hypothetical protein Plabr_4209 [Planctomyces brasiliensis DSM 5305] gi|324971004|gb|ADY61782.1| hypothetical protein Plabr_4209 [Planctomyces brasiliensis DSM 5305] Length = 526 Score = 42.4 bits (99), Expect = 0.065, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 + + QLA G+ + KRG++ +AI Q+V+ ++ + + Sbjct: 431 PDLDHALELANQAVEVVPQLAEFRDTRGQIHAKRGDWKSAILDLQIVVRHFPNRKQV--- 487 Query: 230 MARLVEAYVALALMDEAREVVS 251 + L +AY L D A Sbjct: 488 LELLAKAYEELGDNDVAAAYRR 509 >gi|126173977|ref|YP_001050126.1| TPR repeat-containing protein [Shewanella baltica OS155] gi|153000269|ref|YP_001365950.1| Tol-Pal system YbgF [Shewanella baltica OS185] gi|217973702|ref|YP_002358453.1| tol-pal system protein YbgF [Shewanella baltica OS223] gi|125997182|gb|ABN61257.1| Tetratricopeptide TPR_2 repeat protein [Shewanella baltica OS155] gi|151364887|gb|ABS07887.1| Tol-Pal system YbgF [Shewanella baltica OS185] gi|217498837|gb|ACK47030.1| tol-pal system protein YbgF [Shewanella baltica OS223] Length = 249 Score = 42.4 bits (99), Expect = 0.065, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 22/124 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 KY A +I QYP+S Y +G Q + Sbjct: 139 KERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFA--------EAKQAFKTV 190 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V+R+++S + + + K G+ A +Q V+ +Y+++ Sbjct: 191 VDRFSDSNKRGDSLVKLGMIAE--------------KTGDKAGATQYYQQVVKDYANSAA 236 Query: 226 AEEA 229 A A Sbjct: 237 ARIA 240 Score = 38.9 bits (90), Expect = 0.76, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 17/131 (12%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL--- 116 YE AV LKE+ + A F + +P + A + + ++ ++ +A Sbjct: 130 YESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQAFKT 189 Query: 117 -GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + + + MI + D+ QY ++V+ Y NS Sbjct: 190 VVDRFSDSNKRGDS---------LVKLGMIAEKTGDKAG---ATQYYQQVVKDYANSAAA 237 Query: 176 KGARFYVTVGR 186 + A+ + + Sbjct: 238 RIAQQQLAAIK 248 >gi|119485353|ref|ZP_01619681.1| TPR repeat protein [Lyngbya sp. PCC 8106] gi|119457109|gb|EAW38235.1| TPR repeat protein [Lyngbya sp. PCC 8106] Length = 310 Score = 42.4 bits (99), Expect = 0.065, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 61/176 (34%), Gaps = 42/176 (23%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRY---------QREVYEKAVLFLKE---- 70 + SIAV F +G+ + L+S + Q++ Y +A+ L + Sbjct: 7 VLCSLSIAVIFWIGYSVSAFAQTPLNSPSKAENYLSQAIEQIQQQHYSQALQALNQAINL 66 Query: 71 ------------------QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 N+S+A + ++ P + + + L Y +G + Sbjct: 67 DNTLVEAYRDRCLISVQLGNYSQAIQDCLYATQLQPHSN-SNNTYLNLGIAYYRSGDFTH 125 Query: 113 AASLGEEYITQYPESKNVDYV---YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 A + + I ++ YY G++Y+++ +D L Y + + Sbjct: 126 AIAAYDHLI------EHQADAVLGYYNRGLAYSEL-QDYTNAIADYNQALNYTASL 174 >gi|114648901|ref|XP_001147935.1| PREDICTED: intraflagellar transport 88 homolog isoform 7 [Pan troglodytes] Length = 796 Score = 42.4 bits (99), Expect = 0.065, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 85/303 (28%), Gaps = 64/303 (21%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 437 QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 496 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 497 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 549 Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157 ++ + +N V Y + Y Q++ +P D + Sbjct: 550 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 609 Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196 QY + ++ + + A Y + + ++ + Sbjct: 610 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 669 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSL 252 + + G Q L Y D E + LV L L D A+E Sbjct: 670 ASCFRRSGN-------SQKALDTYKDTHRKFPENVECLRFLVRLCTDLGLKD-AQEYARK 721 Query: 253 IQE 255 ++ Sbjct: 722 LKR 724 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KAV +L+++++++A E + + V + + + Y + QA+S Sbjct: 429 NKAVTYLRQKDYNQAVEILKVLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 486 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 487 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 542 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y Sbjct: 543 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 578 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AI V++ +++L E Y +A + Sbjct: 579 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 617 >gi|94971629|ref|YP_593677.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94553679|gb|ABF43603.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 722 Score = 42.4 bits (99), Expect = 0.065, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 75/217 (34%), Gaps = 37/217 (17%) Query: 60 VYEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASL 116 +YE+ V + +KA E + P + L A + + G+ + A Sbjct: 82 MYEEMVATYGRAEYANKAIEEYRAAITADPSSDY-----LNAGLADLYWRTGRIRDAVLE 136 Query: 117 GEEYITQYPESKNVDYVY---YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 +E + + P++ + + YL + Q + D + +L ++ IV+ S Sbjct: 137 AQEILKRDPKNVDAHRLLGRIYLRSLGDMQSGNNQSRDMQ--RLAIEQYEEIVKLDPTS- 193 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 + +GR Y + A F+ + D+ EEA+ L Sbjct: 194 ----------------VEDHLLLGRLYSYSNDLTKAEKEFKTAVQIQPDS---EEAVTML 234 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 Y +A+EV+S P + + + + Sbjct: 235 AYLYTQEGDTKKAQEVLS----NIPDDDRSAKLYSTL 267 >gi|255034847|ref|YP_003085468.1| Tetratricopeptide TPR_2 repeat-containing protein [Dyadobacter fermentans DSM 18053] gi|254947603|gb|ACT92303.1| Tetratricopeptide TPR_2 repeat protein [Dyadobacter fermentans DSM 18053] Length = 352 Score = 42.4 bits (99), Expect = 0.065, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 50/132 (37%), Gaps = 14/132 (10%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G ++ D D + + ++ + + +A YF+Q P + Sbjct: 186 MGSYTEARLDFETAVALDPAQPQALNNLGLIASRNHQWQQAIAYFDQVLSRDPSEPYSLN 245 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + +GK ++A L E + + PE+ Y +GM Y Q + +T Sbjct: 246 ---NKGYALLQSGKPEEAKVLIERSLEKLPEN---GYALRNLGM-YYQQ-------KGST 291 Query: 156 KLMLQYMSRIVE 167 + L+ ++ ++ Sbjct: 292 QEALKSFNKAID 303 >gi|124516514|gb|EAY58022.1| protein of unknown function [Leptospirillum rubarum] gi|206603409|gb|EDZ39889.1| Protein of unknown function [Leptospirillum sp. Group II '5-way CG'] Length = 231 Score = 42.4 bits (99), Expect = 0.065, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 70/226 (30%), Gaps = 53/226 (23%) Query: 50 SVTDVRYQREVYEKA-VLFLKEQNFSKAY----EYFNQCSRDFPFAGVARKSLLMSAFVQ 104 S + YE + L + KA + + ++ + A Sbjct: 17 SPSSPLAGEAFYELGRMDDLYGNDPQKAAGHYMKSLENLKD----GSLRQRVSIDLATDL 72 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---YDQRA------- 154 GK +A ++ L G+ + ++ +D A Sbjct: 73 EHLGKPDEALAI-------------------LRGLDGSNLLSTFKPRVWDLTARILEHEG 113 Query: 155 -TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 + L Y ++ +R +S + A+F + + LA ++ +R + RF Sbjct: 114 HYREALGYYKKVSDREPDSFRGQKAQFKIGLL-ESLA-SDLPSA----QRD-----LGRF 162 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + Y D+ A L + L +A ++ I+ YP Sbjct: 163 ---VKRYPDSPFTPVARFNLALTWDRLGDHQKALSILESIKGSYPN 205 >gi|328789632|ref|XP_396581.4| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Apis mellifera] Length = 1255 Score = 42.4 bits (99), Expect = 0.066, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 24/141 (17%) Query: 133 VYYLVGM------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179 Y L+ + + Q +D ++R L +++ + + + Sbjct: 600 AYSLIALGNIWLQTLHQSGKDKDREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHK 659 Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 V R+ A +E + I Y+++ ++V+AI ++ L + H E Sbjct: 660 GCVNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHV-EV 718 Query: 230 MARLVEAYVALALMDEAREVV 250 + L AY + EA+ + Sbjct: 719 LQYLGRAYFKAGKLKEAKLTL 739 >gi|282879640|ref|ZP_06288371.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1] gi|281306588|gb|EFA98617.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1] Length = 875 Score = 42.4 bits (99), Expect = 0.066, Method: Composition-based stats. Identities = 9/69 (13%), Positives = 23/69 (33%), Gaps = 4/69 (5%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A + K ++ +A + + + + GV+ Y +A E Sbjct: 651 QEADMAYKHGSYQEAIKMYEELLKQ----GVSADLYYNLGNAYYRTDDLTKAILAYERAS 706 Query: 122 TQYPESKNV 130 P ++ Sbjct: 707 LLSPGDDDI 715 >gi|225620899|ref|YP_002722157.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] gi|225215719|gb|ACN84453.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] Length = 952 Score = 42.4 bits (99), Expect = 0.066, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 3/73 (4%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ + + + + + + KA FN+ + P +A L Y KY++A Sbjct: 451 EKAYFNRGLSKAQLERYKKAIVDFNKVIKLNPKNEIA---YLARGISNYELKKYEEAIVD 507 Query: 117 GEEYITQYPESKN 129 + I P ++ Sbjct: 508 FNKAIKLNPNNEE 520 Score = 38.9 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 28/219 (12%), Positives = 67/219 (30%), Gaps = 63/219 (28%) Query: 49 DSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQC-----SRDFPF------------- 89 DS+ +Y + + ++ + + +A +YFN+ + Sbjct: 34 DSIEKYNDDEYLYFNRGLEKIESKLYEEAIKYFNKTIGLNQKNRDAYFFRGLAKTELKLY 93 Query: 90 ----AGVARKSLLMS-----------AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 L A Y++A + I P+++ Y Sbjct: 94 EEAIEDFNESIELNLKNWESYFARGIAKANLKL--YEEAIEDFNKSIELNPKNEK---AY 148 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 + G+S A++ + + + ++++E + A F + +L E Sbjct: 149 FNRGISKAKL--------KKYEESIVDFNKVIELNPKNE---KAYFNRGFAKAKLKKYEK 197 Query: 195 EIGRY-------------YLKRGEYVAAIPRFQLVLANY 220 I + Y RG A + R++ + ++ Sbjct: 198 SIVDFNNAIKLDSKNVEVYFYRGISKAKLERYEESIVDF 236 Score = 38.9 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 64/202 (31%), Gaps = 48/202 (23%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + + V K + + ++ FN+ + P +S + KY++A + Sbjct: 282 ESYFNRGVSKAKLEKYEESIVDFNEVIKLNP---KNVESYFNRGVSKAKLEKYEEAIADF 338 Query: 118 EEYITQYPESKNVDYVYYLVGMS------YAQMIRDVP--------------------YD 151 I P + VY+ G++ Y + I D D Sbjct: 339 NNAIKLNPNDEK---VYFASGLAKADLERYEESIVDFNEVIKLNSKNVEAYFYRGVAKAD 395 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY------------ 199 + + + +++ + A FY V + +L E I + Sbjct: 396 LERYEESIVDFNEVIKLDPKN---VEAYFYRGVSKAKLEKYEESIIDFNEVITFNPNDEK 452 Query: 200 -YLKRGEYVAAIPRFQLVLANY 220 Y RG A + R++ + ++ Sbjct: 453 AYFNRGLSKAQLERYKKAIVDF 474 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 71/190 (37%), Gaps = 30/190 (15%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 D + + ++ + + + K + + ++ FN+ P K+ F Sbjct: 132 EDFNKSIELNPKNEKAYFNRGISKAKLKKYEESIVDFNKVIELNP---KNEKAYFNRGFA 188 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + KY+++ I +SKNV+ VY+ G+S A++ R + + + Sbjct: 189 KAKLKKYEKSIVDFNNAIKL--DSKNVE-VYFYRGISKAKLER--------YEESIVDFN 237 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAI 210 ++ +S V FY V + +L E I + Y RG A + Sbjct: 238 NAIKL--DSKNV-EVYFYRGVSKAKLERYEESIVDFNEIIKLNPKNVESYFNRGVSKAKL 294 Query: 211 PRFQLVLANY 220 +++ + ++ Sbjct: 295 EKYEESIVDF 304 >gi|224368241|ref|YP_002602404.1| hypothetical protein HRM2_11280 [Desulfobacterium autotrophicum HRM2] gi|223690957|gb|ACN14240.1| conserved hypothetical protein [Desulfobacterium autotrophicum HRM2] Length = 345 Score = 42.4 bits (99), Expect = 0.066, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 44/115 (38%), Gaps = 7/115 (6%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 ++FF + V + + +Y+D+ Y A + S A F Sbjct: 52 LIPSLFFILVVMAVDPTFGSNKGGIYIDADMQ-------YGYAQQCFNSGDPSTALVEFK 104 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + FP R++ ++ Y+ +Y++A + E ++ + + V Y++ Sbjct: 105 RFIHFFPEDTRVRQAQFLTGQAYYATKRYEEARKIFETFLFPFSQDPLVIEAYFM 159 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 10/96 (10%) Query: 96 SLLMSAFVQ--YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 + + + Q +++G A + +I +PE V +L G +Y R Sbjct: 80 ADMQYGYAQQCFNSGDPSTALVEFKRFIHFFPEDTRVRQAQFLTGQAYYATKR------- 132 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + + + ++ P V A F V+ Q+ Sbjct: 133 -YEEARKIFETFLFPFSQDPLVIEAYFMVSRTLEQM 167 Score = 35.5 bits (81), Expect = 7.9, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 27/96 (28%), Gaps = 14/96 (14%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 L R + + V+ A+ G+ Y Y A F+ L Sbjct: 99 ALVEFKRFIHFFPEDTRVRQAQ--------------FLTGQAYYATKRYEEARKIFETFL 144 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +S EA + + +A V+ + Sbjct: 145 FPFSQDPLVIEAYFMVSRTLEQMDKAGQAETVLQNL 180 >gi|206603643|gb|EDZ40123.1| Probable cellulose synthase operon protein C [Leptospirillum sp. Group II '5-way CG'] Length = 964 Score = 42.4 bits (99), Expect = 0.066, Method: Composition-based stats. Identities = 24/188 (12%), Positives = 57/188 (30%), Gaps = 45/188 (23%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 + F+IA + S L + ++Y A ++ + +A E++ + Sbjct: 13 CLLSFTIAALVSGALLSEVSDTYAL---SGDEALGQLYRNARFWMNRGDLVRASEFWTRI 69 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV------------- 130 P ++L V G ++A +L + +P + + Sbjct: 70 LDLRPDDP---RALTNLGIVSAQRGDLKKARTLLDRLSRSHPGNPGIGKIRFAIRLGKLD 126 Query: 131 ---------------------DYVYYLVGM-----SYAQMIRDVPYDQRATKLMLQYMSR 164 DY YL G ++++ + +Q + + Sbjct: 127 GKWLLLARKEKKEQHFSAAYHDYERYLKGTPPRGGIALEVLQTESAVPGHFRNAVQGLRQ 186 Query: 165 IVERYTNS 172 + +R+ S Sbjct: 187 LADRHPGS 194 >gi|154484241|ref|ZP_02026689.1| hypothetical protein EUBVEN_01953 [Eubacterium ventriosum ATCC 27560] gi|149734718|gb|EDM50635.1| hypothetical protein EUBVEN_01953 [Eubacterium ventriosum ATCC 27560] Length = 692 Score = 42.4 bits (99), Expect = 0.066, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 4/92 (4%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 +IAV + ++ S T Y +Y KA+ + +++ A + +N R Sbjct: 332 LTTIAVDNNGNIWTADGKKGFIQSFTPTEYATTIY-KALQEYENGDYTDALKDWNYVLRL 390 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + +A A Y+ +Y +A E Sbjct: 391 NQMSVLAHNG---VAKAYYNDEEYDKAMEHFE 419 >gi|114648905|ref|XP_509562.2| PREDICTED: intraflagellar transport protein 88 homolog isoform 9 [Pan troglodytes] gi|114648907|ref|XP_001147872.1| PREDICTED: intraflagellar transport 88 homolog isoform 6 [Pan troglodytes] gi|114648909|ref|XP_001147353.1| PREDICTED: intraflagellar transport 88 homolog isoform 1 [Pan troglodytes] gi|114648911|ref|XP_001147810.1| PREDICTED: intraflagellar transport 88 homolog isoform 5 [Pan troglodytes] gi|114648913|ref|XP_001147652.1| PREDICTED: intraflagellar transport 88 homolog isoform 3 [Pan troglodytes] gi|114648917|ref|XP_001148082.1| PREDICTED: intraflagellar transport 88 homolog isoform 8 [Pan troglodytes] Length = 824 Score = 42.4 bits (99), Expect = 0.066, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 85/303 (28%), Gaps = 64/303 (21%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 428 QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 487 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 488 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 540 Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157 ++ + +N V Y + Y Q++ +P D + Sbjct: 541 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 600 Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196 QY + ++ + + A Y + + ++ + Sbjct: 601 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 660 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSL 252 + + G Q L Y D E + LV L L D A+E Sbjct: 661 ASCFRRSGN-------SQKALDTYKDTHRKFPENVECLRFLVRLCTDLGLKD-AQEYARK 712 Query: 253 IQE 255 ++ Sbjct: 713 LKR 715 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KAV +L+++++++A E + + V + + + Y + QA+S Sbjct: 420 NKAVTYLRQKDYNQAVEILKVLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 477 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 478 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 533 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y Sbjct: 534 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 569 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AI V++ +++L E Y +A + Sbjct: 570 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 608 >gi|29346313|ref|NP_809816.1| hypothetical protein BT_0903 [Bacteroides thetaiotaomicron VPI-5482] gi|253568266|ref|ZP_04845677.1| BatE [Bacteroides sp. 1_1_6] gi|29338208|gb|AAO76010.1| BatE, TRP domain containing protein [Bacteroides thetaiotaomicron VPI-5482] gi|251842339|gb|EES70419.1| BatE [Bacteroides sp. 1_1_6] Length = 277 Score = 42.4 bits (99), Expect = 0.066, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 43/121 (35%), Gaps = 13/121 (10%) Query: 19 LYKFALTIFFSIAV-CFLVGWERQSS-RDVYLDSV-------TDVRYQREVYEKAVLFLK 69 + K I S++V CF G + S + DS+ +D + + + Sbjct: 1 MKKILFFILLSMSVTCFGQGTQSIDSIQITEADSIHAGSHTFSDTKLEDVTKAEGDSAYI 60 Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + +++ A + + ++ + Y AG+ +A E + P + + Sbjct: 61 KDDYATAIQIYESLLKN---GE-SADVYYNLGNSYYKAGEIAKAVLNYERALLMKPGNSD 116 Query: 130 V 130 + Sbjct: 117 I 117 >gi|145501341|ref|XP_001436652.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124403794|emb|CAK69255.1| unnamed protein product [Paramecium tetraurelia] Length = 644 Score = 42.4 bits (99), Expect = 0.067, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 7/78 (8%) Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 +K+Q + A Y N + P + ++L + A+ Y + QA ++ E+ + YP Sbjct: 18 TLIKDQKYKDAINYLNYELQFCPKS----RALSLLAYCHYMNQDFSQAVAIYEQLVKYYP 73 Query: 126 ESKNVDYVYYLVGMSYAQ 143 + DY YL SY + Sbjct: 74 --EIDDYKIYL-AQSYYK 88 >gi|145492455|ref|XP_001432225.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124399335|emb|CAK64828.1| unnamed protein product [Paramecium tetraurelia] Length = 479 Score = 42.4 bits (99), Expect = 0.067, Method: Composition-based stats. Identities = 19/153 (12%), Positives = 41/153 (26%), Gaps = 30/153 (19%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-MSAFVQYSAGK 109 + + ++ E K NF +A E++ + R L AF Sbjct: 2 IPNSPEAEKLKELGNEQFKSSNFQRAIEFYTAAADKANGNQ--RLVCLSNRAFAHIKMEN 59 Query: 110 YQQAASLGEE-------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y A +E +I YY G +Y + + + + Sbjct: 60 YGLAIIDADEILKEDSGFIK----------AYYRKGSAYLLLGKFDD-----ARKEFKRA 104 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + + + + + + +E Sbjct: 105 DTLTQG-----KDADIQAKLKQIKQAIYEREFA 132 >gi|295401536|ref|ZP_06811505.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus thermoglucosidasius C56-YS93] gi|294976448|gb|EFG52057.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus thermoglucosidasius C56-YS93] Length = 492 Score = 42.4 bits (99), Expect = 0.067, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 38/98 (38%), Gaps = 10/98 (10%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGV 92 L+ + D D D+ Q+E +A L L+++ F +A +P ++ Sbjct: 132 LMELLKIDQEDENGDEQDDLITQQE---RARLLLEKEKFPEAIRLLEMIIDRYPEFWSAY 188 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 A + G Q+A + E+ + + P + + Sbjct: 189 N-----NLALAYFYNGNVQKAQEIIEQVLERNPGNLHA 221 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 80/214 (37%), Gaps = 32/214 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++K + ++++ KA +Y D A A + A V G+YQ + Sbjct: 24 YFKKGMQAYQQRDLYKAKKYLERAVQYDGNNASFALQ----LASVLAELGEYQASNQWL- 78 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + + +D +Y + ++A + ++Y + R + + + Sbjct: 79 -FKIIHELDETMDECFYFLANNFAHL--------GLFHEAMKYAETYLARDPDGHFAEDT 129 Query: 179 RFYVTVGR------------NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + + + + + +E R L++ ++ AI ++++ Y + A Sbjct: 130 EDLMELLKIDQEDENGDEQDDLITQQER--ARLLLEKEKFPEAIRLLEMIIDRYPEFWSA 187 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 +A AY + +A+E++ + ER P Sbjct: 188 YNNLAL---AYFYNGNVQKAQEIIEQVLERNPGN 218 >gi|256076828|ref|XP_002574711.1| o-linked n-acetylglucosamine transferase ogt [Schistosoma mansoni] gi|238659924|emb|CAZ30944.1| o-linked n-acetylglucosamine transferase, ogt, putative [Schistosoma mansoni] Length = 1084 Score = 42.4 bits (99), Expect = 0.067, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 21/127 (16%) Query: 103 VQYSAGKYQQAASLGEEYITQYP--ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 Y ++ +A + I P E+ + + YL ++ Q+++ Q+ L Sbjct: 555 AYYQLNQFNKAIFDIQRVIHLSPHLENHYLLFANYLHKLANTQLVQHS--IQQYLSLAES 612 Query: 161 YMSRIVE--RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + VE R T S N L G+YY+K G Y++AI F + Sbjct: 613 EKHKQVEQMRCTKSEKA--------EIYNHL-------GQYYMKIGNYLSAIHAFTTFIQ 657 Query: 219 NYSDAEH 225 H Sbjct: 658 YNPHRPH 664 >gi|255072537|ref|XP_002499943.1| chloroplast envelope protein translocase family [Micromonas sp. RCC299] gi|226515205|gb|ACO61201.1| chloroplast envelope protein translocase family [Micromonas sp. RCC299] Length = 475 Score = 42.4 bits (99), Expect = 0.067, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 36/142 (25%), Gaps = 25/142 (17%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQ 112 + A KE ++KA E +++ P ++L AF Y Sbjct: 3 ETPETLKAAANALFKEHKYAKAVEAYSRALEVSP-----NNAILLSNRAFAHVRLENYGS 57 Query: 113 AASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + I P Y YY G S + L+ + Sbjct: 58 AIEDASKAIESDPN-----YIKAYYRRGTSQYAL--------GHLTDALKDFKTVCRMQP 104 Query: 171 NSPYVKGARFYVTVGRNQLAAK 192 R + L K Sbjct: 105 QDR---DGRMKLKECEGALRKK 123 >gi|114677991|ref|XP_512768.2| PREDICTED: serine/threonine-protein phosphatase 5 isoform 4 [Pan troglodytes] Length = 499 Score = 42.4 bits (99), Expect = 0.067, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102 + ++ E+ +A + K +++ A ++++Q P +S A+ Sbjct: 18 EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 74 Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y+ G +A L ++YI YY S + + L Sbjct: 75 TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 116 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + +V+ + A+ + K E Sbjct: 117 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149 >gi|94968182|ref|YP_590230.1| N-acetylmuramoyl-L-alanine amidase [Candidatus Koribacter versatilis Ellin345] gi|94550232|gb|ABF40156.1| N-acetylmuramoyl-L-alanine amidase [Candidatus Koribacter versatilis Ellin345] Length = 731 Score = 42.4 bits (99), Expect = 0.067, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 41/121 (33%), Gaps = 16/121 (13%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFV------QYSAGKY-QQAASLGEEYITQ-Y 124 + K E + + P + A S+L A V + K + A + E ++ + Y Sbjct: 67 YQKVIEAYKKVYFTTPASSKADASILAVAEVMAEEGRHFQDQKPLKDAIAQYE-FLRKEY 125 Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 P SK + +G + ++D ++RY S V A + Sbjct: 126 PGSKYRMDALFTIGQIQKEDLKDPA-------AAKATFEEFLQRYPKSQLVDQAHKALAD 178 Query: 185 G 185 Sbjct: 179 L 179 Score = 38.9 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 27/79 (34%), Gaps = 13/79 (16%) Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 DQ+ K + + + Y S Y A F + KE + AA Sbjct: 107 DQKPLKDAIAQYEFLRKEYPGSKYRMDALFTIGQI-----QKE--------DLKDPAAAK 153 Query: 211 PRFQLVLANYSDAEHAEEA 229 F+ L Y ++ ++A Sbjct: 154 ATFEEFLQRYPKSQLVDQA 172 >gi|5453958|ref|NP_006238.1| serine/threonine-protein phosphatase 5 isoform 1 [Homo sapiens] gi|1709744|sp|P53041|PPP5_HUMAN RecName: Full=Serine/threonine-protein phosphatase 5; Short=PP5; AltName: Full=Protein phosphatase T; Short=PP-T; Short=PPT gi|4558638|gb|AAD22669.1|AC007193_3 PPP5_HUMAN [Homo sapiens] gi|12805033|gb|AAH01970.1| Protein phosphatase 5, catalytic subunit [Homo sapiens] gi|30583389|gb|AAP35939.1| protein phosphatase 5, catalytic subunit [Homo sapiens] gi|60654847|gb|AAX31988.1| protein phosphatase 5 catalytic subunit [synthetic construct] gi|60654849|gb|AAX31989.1| protein phosphatase 5 catalytic subunit [synthetic construct] gi|119577820|gb|EAW57416.1| protein phosphatase 5, catalytic subunit, isoform CRA_b [Homo sapiens] gi|119577821|gb|EAW57417.1| protein phosphatase 5, catalytic subunit, isoform CRA_b [Homo sapiens] gi|261858320|dbj|BAI45682.1| protein phosphatase 5, catalytic subunit [synthetic construct] Length = 499 Score = 42.4 bits (99), Expect = 0.067, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102 + ++ E+ +A + K +++ A ++++Q P +S A+ Sbjct: 18 EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 74 Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y+ G +A L ++YI YY S + + L Sbjct: 75 TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 116 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + +V+ + A+ + K E Sbjct: 117 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149 >gi|218961685|ref|YP_001741460.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] gi|167730342|emb|CAO81254.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] Length = 679 Score = 42.4 bits (99), Expect = 0.068, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 40/94 (42%), Gaps = 1/94 (1%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-V 103 Y + +T E++ A +++NF A Y++Q ++ K+ M AF + Sbjct: 569 KKYPERITLTMTAEELFNYADNAARQRNFKDAIMYYDQIINNYKNNSDDYKASFMKAFLI 628 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + A L +E++ +YP D +++ Sbjct: 629 AEEMKQKDLALQLFKEFLQKYPTGDLNDSAQFMI 662 >gi|170738881|ref|YP_001767536.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp. 4-46] gi|168193155|gb|ACA15102.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp. 4-46] Length = 1056 Score = 42.4 bits (99), Expect = 0.068, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 43/138 (31%), Gaps = 17/138 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + F + ++ +A ++ + P + VA Y G+Y +A + I Sbjct: 65 NRGFAFRNKGDYDRAIADYDHALQIDPNSVVAFN---NRGDAFYHKGEYDRAIADYNRSI 121 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 S + VY G+++ + ++ + Y+ A Sbjct: 122 KL---SSDKAAVYNNRGLAFFSK--------EEYDRAIADYNQALRLDP--KYLSAALNR 168 Query: 182 VTVGRNQLAAKEVEIGRY 199 R++ + I Y Sbjct: 169 GDAFRSK-GEYDRAIADY 185 >gi|37521122|ref|NP_924499.1| hypothetical protein gll1553 [Gloeobacter violaceus PCC 7421] gi|35212118|dbj|BAC89494.1| gll1553 [Gloeobacter violaceus PCC 7421] Length = 357 Score = 42.4 bits (99), Expect = 0.068, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 41/126 (32%), Gaps = 26/126 (20%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS-- 115 +++++ A + N++KA + +N+ + + + + +Y + AA Sbjct: 59 QQLFKDAYAQQNKGNYTKALKIWNEVLQR---SPDEPAAYVNRGITRYLMRDLRGAADDF 115 Query: 116 --LGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + DY Y+ + Y D + + R +E N Sbjct: 116 GLAIDR---------KADYANAYFNRAVVY--------NDLKEFNRAVDDYGRYLELAPN 158 Query: 172 SPYVKG 177 +P Sbjct: 159 APDAPQ 164 >gi|897761|emb|CAA61595.1| protein phosphatase 5 [Homo sapiens] Length = 493 Score = 42.4 bits (99), Expect = 0.068, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102 + ++ E+ +A + K +++ A ++++Q P +S A+ Sbjct: 12 EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 68 Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y+ G +A L ++YI YY S + + L Sbjct: 69 TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 110 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + +V+ + A+ + K E Sbjct: 111 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 143 >gi|254517521|ref|ZP_05129577.1| tetratricopeptide TPR_2 repeat protein [Clostridium sp. 7_2_43FAA] gi|226911270|gb|EEH96471.1| tetratricopeptide TPR_2 repeat protein [Clostridium sp. 7_2_43FAA] Length = 388 Score = 42.4 bits (99), Expect = 0.068, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 9/117 (7%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 RE Y KA E+ ++ + + + + A G +A Sbjct: 270 RENYMKATDSFDEEKYNDTKVILESTIIYAENSHLNDDIMFLLASTYEKLGDNNEAIKNF 329 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 E+YI+ Y ++ YY + + Y RD+ D Y ++ +Y+NS Y Sbjct: 330 EKYISSYENGNYIEESYYKIALLY----RDLNKD-----KSKYYAKELISKYSNSIY 377 >gi|255524473|ref|ZP_05391428.1| TPR repeat-containing protein [Clostridium carboxidivorans P7] gi|296185974|ref|ZP_06854379.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7] gi|255511769|gb|EET88054.1| TPR repeat-containing protein [Clostridium carboxidivorans P7] gi|296049242|gb|EFG88671.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7] Length = 279 Score = 42.4 bits (99), Expect = 0.069, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 25/72 (34%), Gaps = 9/72 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 EK + FL + KA YFN+ ++ R + +Y++A + Sbjct: 10 EKGLEFLNNGEYEKAEPYFNKVLNIDNNYAEGYYFR------GYCYVKMKEYEKALMDLD 63 Query: 119 EYITQYPESKNV 130 + I P Sbjct: 64 KSIKLDPSDSRA 75 >gi|329118009|ref|ZP_08246722.1| hypothetical protein HMPREF9123_0149 [Neisseria bacilliformis ATCC BAA-1200] gi|327465897|gb|EGF12169.1| hypothetical protein HMPREF9123_0149 [Neisseria bacilliformis ATCC BAA-1200] Length = 220 Score = 42.4 bits (99), Expect = 0.069, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 10/123 (8%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E A + +++ A + R+++ + G + +G Y+ Sbjct: 105 ETARRLYAQGSYTAAARSLQYAESGGSGSDADRRAMHLLLQSHRKLGNCESVIQIGSRYV 164 Query: 122 TQYPESKNVDYVYYLVGMS-YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +++ S + VG + RDV D +++ Y SP + A Sbjct: 165 SRFARSPEAADTLFTVGQCQWDMQQRDVARD---------TWRKLMRLYPASPAAQKAAR 215 Query: 181 YVT 183 + Sbjct: 216 HAD 218 >gi|237749148|ref|ZP_04579628.1| N-acetylglucosaminyl transferase [Oxalobacter formigenes OXCC13] gi|229380510|gb|EEO30601.1| N-acetylglucosaminyl transferase [Oxalobacter formigenes OXCC13] Length = 391 Score = 42.4 bits (99), Expect = 0.069, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 7/70 (10%) Query: 52 TDVRYQREV---YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D+ ++++ YE FLK +A E F + + P++ AR++LL Sbjct: 100 PDLPAEQQMQAQYELGQDFLKAGLLDRAEEVFQKLTET-PYSIQARRALLEI---FQREK 155 Query: 109 KYQQAASLGE 118 ++QQA E Sbjct: 156 EWQQAIEAAE 165 >gi|304409846|ref|ZP_07391466.1| tol-pal system protein YbgF [Shewanella baltica OS183] gi|307304202|ref|ZP_07583955.1| tol-pal system protein YbgF [Shewanella baltica BA175] gi|304352364|gb|EFM16762.1| tol-pal system protein YbgF [Shewanella baltica OS183] gi|306913100|gb|EFN43523.1| tol-pal system protein YbgF [Shewanella baltica BA175] Length = 249 Score = 42.4 bits (99), Expect = 0.070, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 22/124 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 KY A +I QYP+S Y +G Q + Sbjct: 139 KERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFA--------EAKQAFKTV 190 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V+R+++S + + + K G+ A +Q V+ +Y+++ Sbjct: 191 VDRFSDSNKRGDSLVKLGMIAE--------------KTGDKAGATQYYQQVVKDYANSAA 236 Query: 226 AEEA 229 A A Sbjct: 237 ARIA 240 Score = 38.9 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 17/131 (12%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL--- 116 YE AV LKE+ + A F + +P + A + + ++ ++ +A Sbjct: 130 YESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQAFKT 189 Query: 117 -GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + + + MI + D+ QY ++V+ Y NS Sbjct: 190 VVDRFSDSNKRGDS---------LVKLGMIAEKTGDKAG---ATQYYQQVVKDYANSAAA 237 Query: 176 KGARFYVTVGR 186 + A+ + + Sbjct: 238 RIAQQQLAAIK 248 >gi|326386203|ref|ZP_08207827.1| hypothetical protein Y88_2095 [Novosphingobium nitrogenifigens DSM 19370] gi|326209428|gb|EGD60221.1| hypothetical protein Y88_2095 [Novosphingobium nitrogenifigens DSM 19370] Length = 350 Score = 42.4 bits (99), Expect = 0.071, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 34/105 (32%), Gaps = 20/105 (19%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + V++Y ++ RN L GR YL + AA Q Sbjct: 242 EAETALLDFVQKYPKH-------KRISYARNLL-------GRAYLDDNKPGAA---AQWF 284 Query: 217 LANYSDAEHAEEA---MARLVEAYVALALMDEAREVVSLIQERYP 258 NY + A+ A + L A L A + ++ YP Sbjct: 285 AQNYQADKAADRAPDSLLYLAVAMAKLKQPQRACIALGEFKDTYP 329 >gi|311265978|ref|XP_003130917.1| PREDICTED: intraflagellar transport protein 88 homolog [Sus scrofa] Length = 377 Score = 42.4 bits (99), Expect = 0.071, Method: Composition-based stats. Identities = 33/259 (12%), Positives = 75/259 (28%), Gaps = 55/259 (21%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99 Q+S L +D + K ++ KA E++ D + +L Sbjct: 29 QASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYN 84 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIR 146 + +A ++ + +N +V Y + Y Q++ Sbjct: 85 IGLTYKKLNRLDEALDC---FLKLHAILRNSAHVLYQIANIYELMEDPGQAVEWLMQLLS 141 Query: 147 DVPYDQRATKL-------------MLQYMSRIVERYTNS--------PYVKGAR------ 179 VP D R QY + +S Y + Sbjct: 142 VVPTDSRVLSKLGGLYDSEGDKSQAFQYYYESYRYFPSSIDVIEWLGAYYVDTQFCEKAI 201 Query: 180 ---FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 ++ + ++ + + + G Y A+ ++ + + + E + LV Sbjct: 202 QYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRMFPE---NAECLRFLVRL 258 Query: 237 YVALALMDEAREVVSLIQE 255 + L E +E + ++ Sbjct: 259 CTDIGLK-EVQEYAAKLKR 276 >gi|218709112|ref|YP_002416733.1| hypothetical protein VS_1118 [Vibrio splendidus LGP32] gi|218322131|emb|CAV18245.1| Hypothetical protein VS_1118 [Vibrio splendidus LGP32] Length = 265 Score = 42.4 bits (99), Expect = 0.071, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 46/127 (36%), Gaps = 15/127 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ QR + + + + +S + +++ G+ Y Sbjct: 152 YQNAVDMILKQRDYTGAIAAFQKFQKDFPDSTFTPNTHYWL--------------GQLYF 197 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A+ F V+ +Y D+ +A+ +L + +A++ + YP Sbjct: 198 AKKQDKEAVKSFAAVV-SYKDSNKRSDALVKLGDIATRNNNATQAKKYYQQVVTEYPNSA 256 Query: 262 WARYVET 268 A+ +T Sbjct: 257 SAKVAKT 263 Score = 40.1 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 58/158 (36%), Gaps = 17/158 (10%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDF 87 + + + S+D TDV ++ Y+ AV LK+++++ A F + +DF Sbjct: 121 AAGTATVAVTASEGSKDASGTFSTDVD-EQTAYQNAVDMILKQRDYTGAIAAFQKFQKDF 179 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAA---SLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 P + + + ++ + ++A + Y S + Sbjct: 180 PDSTFTPNTHYWLGQLYFAKKQDKEAVKSFAAVVSYKDSNKRSDAL------------VK 227 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + D+ +Y ++V Y NS K A+ ++ Sbjct: 228 LGDIATRNNNATQAKKYYQQVVTEYPNSASAKVAKTHL 265 >gi|126662666|ref|ZP_01733665.1| aerotolerance-related exported protein [Flavobacteria bacterium BAL38] gi|126626045|gb|EAZ96734.1| aerotolerance-related exported protein [Flavobacteria bacterium BAL38] Length = 252 Score = 42.4 bits (99), Expect = 0.071, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 22/70 (31%), Gaps = 3/70 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++KA + + A E F + A Y GK + E+ Sbjct: 25 FKKANDLYNKGKYQNALETFETIVNQ---GNESADLYFNMANCYYKLGKVAPSIYNYEKA 81 Query: 121 ITQYPESKNV 130 + P+ + + Sbjct: 82 LLLNPDDEAI 91 >gi|113970701|ref|YP_734494.1| hypothetical protein Shewmr4_2366 [Shewanella sp. MR-4] gi|114047930|ref|YP_738480.1| hypothetical protein Shewmr7_2438 [Shewanella sp. MR-7] gi|113885385|gb|ABI39437.1| conserved hypothetical protein [Shewanella sp. MR-4] gi|113889372|gb|ABI43423.1| conserved hypothetical protein [Shewanella sp. MR-7] Length = 250 Score = 42.4 bits (99), Expect = 0.071, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 22/124 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 KY A +I QYP+S Y +G Q + + Sbjct: 140 KERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFA--------EAKQAFNTV 191 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V R+++S + + + K G+ A +Q V+ +Y+++ Sbjct: 192 VTRFSDSNKRGDSLVKLGMIAE--------------KTGDKAGATQYYQQVVKDYANSAA 237 Query: 226 AEEA 229 A A Sbjct: 238 ARIA 241 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 46/131 (35%), Gaps = 17/131 (12%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE- 118 YE AV LKE+ + A F + +P + A + + ++ ++ +A Sbjct: 131 YESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQAFNT 190 Query: 119 ---EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + + MI + D+ QY ++V+ Y NS Sbjct: 191 VVTRFSDSNKRGDS---------LVKLGMIAEKTGDKAG---ATQYYQQVVKDYANSAAA 238 Query: 176 KGARFYVTVGR 186 + A+ + + Sbjct: 239 RIAQQQLAAIK 249 >gi|328768058|gb|EGF78105.1| hypothetical protein BATDEDRAFT_13321 [Batrachochytrium dendrobatidis JAM81] Length = 709 Score = 42.4 bits (99), Expect = 0.071, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 84/296 (28%), Gaps = 56/296 (18%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVC-FLVGWERQSSRDVYLDSVTDVRYQREVY 61 +AI + + + K T +++ FL G +QS R D + Sbjct: 339 KDFTQAIETLKTFEKKDPKLVGTAATNLSFLYFLEGDYKQSERYADTAIEHDRYNAKAQT 398 Query: 62 EKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + + + +A + + + D + +++ V Y +A + + Sbjct: 399 NRGNCDFVKGKYDQARDRYHEAINVD----AICTEAMYNLGLVYKRMNNYNEAL---QWF 451 Query: 121 ITQYPESKNVDYVYYLVGMSYAQM-------------IRDVPYDQRATKL---------- 157 + ++ V Y + Y Q I VP D + Sbjct: 452 EKLHSILRSSPEVIYQIADIYNQQGSTQQAMEWFNILISVVPTDPSVLEKLGSMFERDGD 511 Query: 158 ---MLQYMSRIVERYT--------------NSPYVKGARF---YVTVGRNQLAAKEVEIG 197 QY S Y + + A + + + I Sbjct: 512 KSQAFQYYSESYRYYPCNMDVISWLGAYYVDCEVYEQAIQFFERAILIQPNQVRWPLMIA 571 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 Y + G Y A ++ + + D E + LV L + EA E S + Sbjct: 572 SCYRRSGNYQQAFDTYKRIHEKFPD---NIECLRFLVRICTDLGMK-EATEYASKL 623 >gi|78776856|ref|YP_393171.1| von Willebrand factor, type A [Sulfurimonas denitrificans DSM 1251] gi|78497396|gb|ABB43936.1| von Willebrand factor, type A [Sulfurimonas denitrificans DSM 1251] Length = 595 Score = 42.4 bits (99), Expect = 0.071, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 36/101 (35%), Gaps = 11/101 (10%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + F ++V L+ + D++ +E Y A N+ ++ + Sbjct: 313 MSSFGRKNSLHVSVFLLLALSLHQDAQAGIFDFMDLKKAKEAYNGA-------NYEESAK 365 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +++ + + +S SA Y KY++A + Sbjct: 366 LYDE----YAQKSKSPQSYYNSANAYYKQQKYKEAIEAYNK 402 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 6/85 (7%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G + S +Y + + + Y A + K+Q + +A E +N+ + F ++++ Sbjct: 357 GANYEESAKLYDEYAQKSKSPQSYYNSANAYYKQQKYKEAIEAYNKAT----FDDESQRA 412 Query: 97 --LLMSAFVQYSAGKYQQAASLGEE 119 L G Q+A +E Sbjct: 413 KKLSNLGNAYAKDGDLQKAIDSYKE 437 >gi|148262275|ref|YP_001228981.1| hypothetical protein Gura_0192 [Geobacter uraniireducens Rf4] gi|146395775|gb|ABQ24408.1| hypothetical protein Gura_0192 [Geobacter uraniireducens Rf4] Length = 150 Score = 42.4 bits (99), Expect = 0.071, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 7/77 (9%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + ++ A +E ++ Y +S YL G+ + +D + K + + Sbjct: 78 FDTEQFNDAILHLDEILSSYSKSAAAPEAVYLRGVCRFK----SSHDAKPLKEAYE---K 130 Query: 165 IVERYTNSPYVKGARFY 181 + Y +S +VK A+ Y Sbjct: 131 LASDYPDSEWVKRAQPY 147 >gi|241826580|ref|XP_002414700.1| serine-threonine phosphatase 2A, catalytic subunit, putative [Ixodes scapularis] gi|215508912|gb|EEC18365.1| serine-threonine phosphatase 2A, catalytic subunit, putative [Ixodes scapularis] Length = 493 Score = 42.4 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 45/155 (29%), Gaps = 25/155 (16%) Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARK 95 Q+ + + + E+A + K+Q F+ A + +++ P+ + Sbjct: 12 CVHQNDSNSLKSTPEEEEQANRFKEEANEYFKKQEFNTAIDLYSKAIELDPYKAVYYGNR 71 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQR 153 S F + A S + I + YV YY ++ + Sbjct: 72 S-----FAYLKTECFGYALSDASKAIEL-----DRSYVKGYYRRAAAHMSL--------G 113 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 KL L+ + + N A Sbjct: 114 KFKLALKDFEAVTKARPNDK---DACAKYNECNKI 145 >gi|78224417|ref|YP_386164.1| peptidoglycan-binding LysM [Geobacter metallireducens GS-15] gi|78195672|gb|ABB33439.1| Peptidoglycan-binding LysM [Geobacter metallireducens GS-15] Length = 230 Score = 42.4 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 28/68 (41%), Gaps = 2/68 (2%) Query: 42 SSRDVYLDSVT--DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 +S+ V T ++ ++EK V K + ++ + F++ +P + +A + L Sbjct: 160 ASKAVSPSPATRKGGENEQTLFEKGVSAYKSGQYQQSLDAFDRFLARYPESPLAPDASLY 219 Query: 100 SAFVQYSA 107 A Sbjct: 220 RADALMKM 227 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV-YYL 136 ++L Y +G+YQQ+ + ++ +YPES Y Sbjct: 177 EQTLFEKGVSAYKSGQYQQSLDAFDRFLARYPESPLAPDASLYR 220 >gi|70990982|ref|XP_750340.1| DnaJ and TPR domain protein [Aspergillus fumigatus Af293] gi|66847972|gb|EAL88302.1| DnaJ and TPR domain protein [Aspergillus fumigatus Af293] gi|159130814|gb|EDP55927.1| DnaJ and TPR domain protein [Aspergillus fumigatus A1163] Length = 693 Score = 42.4 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 68/208 (32%), Gaps = 21/208 (10%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 F K+ N+++A E F + P + + L A SA +Y +A E + Sbjct: 205 AGNKFFKDGNYNRAIEEFTKAIEINPSSSI---YLSNRAAAYLSANRYLEALEDAERALE 261 Query: 123 QYPESKNVDY--VYYLVGMSY-AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 P++ + Y L + ++ + + Q + ++R+ A Sbjct: 262 LDPDNSKIMYRLARILTALGRPSEALEVLSRVQPPASATDRAAPEKMQRFIKQAEETLAE 321 Query: 180 FY--------VTVGRNQLAA--KE-----VEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + R L KE + LK G + + ++ + Sbjct: 322 DRGVSMVLFCIEQARQLLGRGVKEPRKWTLLTAEAQLKMGSENSFRKAQDIAISMLRENN 381 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSL 252 +A+ AY L ++A + + + Sbjct: 382 QDPDALMIRARAYYGLGESEQALKTLKM 409 >gi|303242692|ref|ZP_07329165.1| Rhomboid family protein [Acetivibrio cellulolyticus CD2] gi|302589777|gb|EFL59552.1| Rhomboid family protein [Acetivibrio cellulolyticus CD2] Length = 524 Score = 42.4 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 55/169 (32%), Gaps = 24/169 (14%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 F + + G+ +RD Y++ Y++ V + +A + Sbjct: 378 FIAATIIVVILGLYYGFNNSRNRDYYIERGK--------YKELVEMADSGKWKEAEKLGE 429 Query: 82 QCSRDFPFAGVARKSLL-MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + P + S L A + S GKY +A E + YYL G+ Sbjct: 430 EIINMRPERNDIKLSTLYNIAAAEASQGKYDEALETAESVKKV-----DAPKGYYLRGLL 484 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 Y D + +L Q ++ V+ Y + Y+ +L Sbjct: 485 Y--------LDTKQYELARQELNEAVKLNP--EYKEEVDQYLKQIEEEL 523 >gi|296134354|ref|YP_003641601.1| Tetratricopeptide TPR_2 repeat protein [Thermincola sp. JR] gi|296032932|gb|ADG83700.1| Tetratricopeptide TPR_2 repeat protein [Thermincola potens JR] Length = 211 Score = 42.4 bits (99), Expect = 0.073, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 55/175 (31%), Gaps = 31/175 (17%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L+ ++ Y G YQ+A + + + ++ +G++Y ++ + Sbjct: 67 LVELGWLYYRKGDYQRAVEVLSRAVKLNRLNPA---AHFNLGLTYQEI--------KLLD 115 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + +E S Y +G+ Y + ++ A +F+L Sbjct: 116 KAEAEFIKTLELDPESKYAY-----------------FALGKLYFSQEKWDEAAEQFKLA 158 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + E L +AY EA +R P AR +K Sbjct: 159 SQKDPVS---VENFFWLGQAYEKQGFRKEALAAYRKALDRVPNHTQAREAYYRLK 210 >gi|225849452|ref|YP_002729617.1| hypothetical protein SULAZ_1659 [Sulfurihydrogenibium azorense Az-Fu1] gi|225643936|gb|ACN98986.1| TPR repeat protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 236 Score = 42.4 bits (99), Expect = 0.073, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 60/154 (38%), Gaps = 25/154 (16%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + + VT + +++Y+ A+ + N ++ + F + + +P + + ++ + Sbjct: 97 KREGKEEVTVPQNDKQLYQYALDLYFKGNIEESRKAFVEFLKKYPDSDLYGNAIFWAGQT 156 Query: 104 QYSAGKYQQAASLGEEYITQ-----------YPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 Y+ KY+ A + I + YP+ +G SY +M Sbjct: 157 FYAEKKYKDAIDVFNLLIQKCDEGKIKRCVKYPD------AMLKIGYSYIEM-------- 202 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + +Y+ ++++Y ++ A+ + R Sbjct: 203 GDVEKGKKYLQDLIQKYPDTEPASLAKKKLEALR 236 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 14/114 (12%), Positives = 40/114 (35%), Gaps = 19/114 (16%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + + +++Y +S A G+ + +Y AI Sbjct: 124 GNIEESRKAFVEFLKKYPDSDLYGNAI--------------FWAGQTFYAEKKYKDAIDV 169 Query: 213 FQLVLAN-----YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 F L++ +AM ++ +Y+ + +++ ++ + + ++YP Sbjct: 170 FNLLIQKCDEGKIKRCVKYPDAMLKIGYSYIEMGDVEKGKKYLQDLIQKYPDTE 223 >gi|307155274|ref|YP_003890658.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822] gi|306985502|gb|ADN17383.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822] Length = 171 Score = 42.4 bits (99), Expect = 0.073, Method: Composition-based stats. Identities = 17/136 (12%), Positives = 43/136 (31%), Gaps = 8/136 (5%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 S+ L S++ + + T+ R + + + + ++ A E F + R +P Sbjct: 26 SLFSSHLPSGSGSSTQLISQAASTEDRLEDRL-VEGMDKGMLGDYQGAIEDFTEVIRLYP 84 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 + ++ G A + + + P N+ Y Y+ + + Sbjct: 85 NSA---EAYYNRGIAYSKLGNSGAAMADYNKAVELNP---NLAEAYVDRAQIYSGLGKTS 138 Query: 149 PYDQRATKLMLQYMSR 164 + K + Sbjct: 139 DA-LKDLKRAADLFKQ 153 >gi|124002760|ref|ZP_01687612.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC 23134] gi|123991988|gb|EAY31375.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC 23134] Length = 658 Score = 42.4 bits (99), Expect = 0.073, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 61/159 (38%), Gaps = 33/159 (20%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y+ G+Y +A L E+ + Y SK+ YV L ++ + Q K ++ Sbjct: 200 YYNQGRYGKAVKLYEKALKFYSTSKDKSYVINL--LTNLGA---LSLRQGQNKQAIKRFQ 254 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEV----------------------------E 195 +++ Y + K A + +G L KE Sbjct: 255 EVLDYYRANDIKKRAYPLMNIGAAYLEEKEYTKSLQYFKKALAIETKANNKNGIIDILHN 314 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 IG Y K+ +Y A+ +++ VL+ +++ + A+A + Sbjct: 315 IGVVYGKQEKYEQALIKYKKVLSMCGNSKQKDRALALIE 353 >gi|160895315|ref|ZP_02076086.1| hypothetical protein CLOL250_02874 [Clostridium sp. L2-50] gi|156863008|gb|EDO56439.1| hypothetical protein CLOL250_02874 [Clostridium sp. L2-50] Length = 469 Score = 42.4 bits (99), Expect = 0.074, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 29/99 (29%), Gaps = 21/99 (21%) Query: 90 AGVARKSLLMSAFV----------QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 + +KS A Y+ +Y +A + ++ + S + D Y + Sbjct: 334 SEYEKKSKAELADADKVSMQLALKYYNDTQYDKAMTEFDKVLE---TSPDYDVALYYKAL 390 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 Y + +++ +S Y A Sbjct: 391 CYLGTEDE--------DKAKTAFETFLDKCPDSIYYTVA 421 Score = 36.2 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 33/98 (33%), Gaps = 7/98 (7%) Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 S Y K ++ + +++ Y +Y A+ F VL + + A+ Sbjct: 334 SEYEKKSKAELADADKV----SMQLALKYYNDTQYDKAMTEFDKVLE---TSPDYDVALY 386 Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 Y+ D+A+ ++ P + +L Sbjct: 387 YKALCYLGTEDEDKAKTAFETFLDKCPDSIYYTVAVSL 424 >gi|126730925|ref|ZP_01746734.1| TPR domain protein [Sagittula stellata E-37] gi|126708641|gb|EBA07698.1| TPR domain protein [Sagittula stellata E-37] Length = 173 Score = 42.4 bits (99), Expect = 0.074, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 8/120 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D+ D +E+ ++ + + +A + F+ PF A AFV + Sbjct: 51 DNAPDEPS-QEMLDEGMRARAAFDMVRALKRFDALVNYCPF--YAE-GYNQRAFVNFIRQ 106 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 Y A + + P ++ + RD Q A + L+ +VER Sbjct: 107 DYAAALPDLDRALELNPRHIG---ALSGRALTLIALGRD-DEGQAALRAALEINPWLVER 162 >gi|117920970|ref|YP_870162.1| hypothetical protein Shewana3_2529 [Shewanella sp. ANA-3] gi|117613302|gb|ABK48756.1| conserved hypothetical protein [Shewanella sp. ANA-3] Length = 250 Score = 42.4 bits (99), Expect = 0.074, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 22/124 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 KY A +I QYP+S Y +G Q + + Sbjct: 140 KERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFA--------EAKQAFNTV 191 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V R+++S + + + K G+ A +Q V+ +Y+++ Sbjct: 192 VTRFSDSNKRGDSLVKLGMIAE--------------KTGDKAGATQYYQQVVKDYANSAA 237 Query: 226 AEEA 229 A A Sbjct: 238 ARIA 241 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 46/131 (35%), Gaps = 17/131 (12%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE- 118 YE AV LKE+ + A F + +P + A + + ++ ++ +A Sbjct: 131 YESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQAFNT 190 Query: 119 ---EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + + MI + D+ QY ++V+ Y NS Sbjct: 191 VVTRFSDSNKRGDS---------LVKLGMIAEKTGDKAG---ATQYYQQVVKDYANSAAA 238 Query: 176 KGARFYVTVGR 186 + A+ + + Sbjct: 239 RIAQQQLAAIK 249 >gi|307720704|ref|YP_003891844.1| Tetratricopeptide TPR_2 repeat-containing protein [Sulfurimonas autotrophica DSM 16294] gi|306978797|gb|ADN08832.1| Tetratricopeptide TPR_2 repeat protein [Sulfurimonas autotrophica DSM 16294] Length = 304 Score = 42.4 bits (99), Expect = 0.074, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 27/120 (22%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQ 111 E+Y +A + ++ ++KA + + + + A+ Y Y Sbjct: 189 ELYNQAKAYFDKKYYTKAIQDYKELIKR----------KYKPAYAHYMIGEMNFKRKNYA 238 Query: 112 QAASLGEEYITQYPESKNVDYVYYL-VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 QA S ++ + Y D Y+ M + + D D+ K +V +Y Sbjct: 239 QAISYFKKSASLY------DKASYMPKLMLHTAIAMDKTGDKEHAKAFYNA---VVVKYP 289 Score = 35.5 bits (81), Expect = 8.2, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 34/105 (32%), Gaps = 14/105 (13%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYI-TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 L A + Y +A +E I +Y Y +Y++G + + Sbjct: 190 LYNQAKAYFDKKYYTKAIQDYKELIKRKY----KPAYAHYMIGEMNFKR--------KNY 237 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 + Y + Y + Y+ + + ++ KE +Y Sbjct: 238 AQAISYFKKSASLYDKASYMPKLMLHTAIAMDKTGDKE-HAKAFY 281 >gi|254787333|ref|YP_003074762.1| tetratricopeptide protein [Teredinibacter turnerae T7901] gi|237684155|gb|ACR11419.1| tetratricopeptide protein [Teredinibacter turnerae T7901] Length = 254 Score = 42.4 bits (99), Expect = 0.074, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 39/98 (39%), Gaps = 3/98 (3%) Query: 55 RYQREV--YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 E+ Y A+ LK+QN+ A + +++P A +L + G+ + Sbjct: 128 SPADELKSYRAAIDLVLKQQNYDAAVVKLKEHLQNYPKGRYAGNALYWLGEIYLLKGELE 187 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + ++++P+ V + +G + M D Sbjct: 188 TSRQWFSQLLSEFPDHPKVADAQFKLGKVHHLMGDDAQ 225 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 29/59 (49%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 LK+ Y AA+ + + L NY +A A+ L E Y+ ++ +R+ S + +P Sbjct: 144 LKQQNYDAAVVKLKEHLQNYPKGRYAGNALYWLGEIYLLKGELETSRQWFSQLLSEFPD 202 Score = 35.5 bits (81), Expect = 8.3, Method: Composition-based stats. Identities = 15/113 (13%), Positives = 40/113 (35%), Gaps = 14/113 (12%) Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 + + D+ Q+ + + ++ Y Y A +++ L E+E R Sbjct: 133 LKSYRAAIDLVLKQQNYDAAVVKLKEHLQNYPKGRYAGNALYWLGEIY--LLKGELETSR 190 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 + F +L+ + D +A +L + + + +A+ ++ Sbjct: 191 QW------------FSQLLSEFPDHPKVADAQFKLGKVHHLMGDDAQAKTLLE 231 >gi|327286751|ref|XP_003228093.1| PREDICTED: serine/threonine-protein phosphatase 5-like [Anolis carolinensis] Length = 475 Score = 42.4 bits (99), Expect = 0.075, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 43/148 (29%), Gaps = 31/148 (20%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF----VQ-YSA 107 + +A + K +++ A +Y+ Q P +S A+ Y+ Sbjct: 2 ERAESLKTQANDYFKAKDYENAVKYYTQAIELNPTNAIYYGNRS---LAYLRTECYGYAL 58 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +A L ++YI YY S + K L+ +V+ Sbjct: 59 ADATKAIELDKKYIK----------GYYRRATSNMAL--------GKFKAALRDYETVVK 100 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVE 195 N A+ + K E Sbjct: 101 VKPNDK---DAKMKYQECNKIVKQKAFE 125 >gi|323345328|ref|ZP_08085551.1| hypothetical protein HMPREF0663_12087 [Prevotella oralis ATCC 33269] gi|323093442|gb|EFZ36020.1| hypothetical protein HMPREF0663_12087 [Prevotella oralis ATCC 33269] Length = 869 Score = 42.4 bits (99), Expect = 0.075, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 23/69 (33%), Gaps = 4/69 (5%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E A ++ N+ +A + + + + GV+ + QA E Sbjct: 645 ENADTEYRKGNYQQAIKDYEELLKQ----GVSADLYYNLGNAYFRTNNITQAVLAYERAY 700 Query: 122 TQYPESKNV 130 P K++ Sbjct: 701 VLSPGDKDI 709 >gi|228473745|ref|ZP_04058490.1| tetratricopeptide repeat-containing domain protein [Capnocytophaga gingivalis ATCC 33624] gi|228274766|gb|EEK13589.1| tetratricopeptide repeat-containing domain protein [Capnocytophaga gingivalis ATCC 33624] Length = 271 Score = 42.4 bits (99), Expect = 0.075, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 51/144 (35%), Gaps = 10/144 (6%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V D + Y + +L+ + +A + ++ S + P ++ +L Sbjct: 136 VIKDYSSSKAANVAYYSAGMAYLQLNKYKEAVTHLDKFSSEDP--ILSALALGNIGDAFV 193 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + + ++A ++ I +S N L Y V +Q+ K L+Y+ +I Sbjct: 194 ALKQPKEAMDYYKKAID---KSDNT-----LTAPIYMNKAALVAEEQKNYKEALEYLEKI 245 Query: 166 VERYTNSPYVKGARFYVTVGRNQL 189 Y S ++ + + Sbjct: 246 KNDYPKSQEATSVDMQISRVKTLM 269 >gi|195055729|ref|XP_001994765.1| GH17416 [Drosophila grimshawi] gi|193892528|gb|EDV91394.1| GH17416 [Drosophila grimshawi] Length = 515 Score = 42.4 bits (99), Expect = 0.075, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 44/149 (29%), Gaps = 25/149 (16%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLL 98 + V D + K LK + FSKA + +++ +P + A ++L Sbjct: 28 TKNDSVPEAGQQDFAAAEQCKNKGNDLLKTKEFSKAIDMYSKAIELYPSSAIYYANRAL- 86 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATK 156 + A G + P Y+ YY ++ + K Sbjct: 87 ----AHLRQENFGLALQDGVSAVKTDPS-----YLKGYYRRAAAHMSL--------GKFK 129 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVG 185 L L + + N A+ T Sbjct: 130 LALSDFEYVAKCRPNDK---DAKLKFTEC 155 >gi|156844451|ref|XP_001645288.1| hypothetical protein Kpol_1037p26 [Vanderwaltozyma polyspora DSM 70294] gi|156115948|gb|EDO17430.1| hypothetical protein Kpol_1037p26 [Vanderwaltozyma polyspora DSM 70294] Length = 342 Score = 42.4 bits (99), Expect = 0.075, Method: Composition-based stats. Identities = 15/125 (12%), Positives = 36/125 (28%), Gaps = 18/125 (14%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF 102 +V D + + + +++ A + + + P A ++ Sbjct: 88 NVTEDDTEASEAAEALKLEGNKAMAGKDYELAIKKYTEAIATLPTNAVYFANRAA----- 142 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 S KY +A I P Y G + + Q + L+ Sbjct: 143 AYSSLKKYDEAVEDANSAIKINPT--------YSKG---YSRLGFAKFAQGKAEDALEAY 191 Query: 163 SRIVE 167 ++++ Sbjct: 192 KKVLD 196 >gi|124024718|ref|YP_001013834.1| TPR-repeat pilus assembly protein TadD [Prochlorococcus marinus str. NATL1A] gi|123959786|gb|ABM74569.1| Flp pilus assembly protein TadD, contains TPR repeats [Prochlorococcus marinus str. NATL1A] Length = 276 Score = 42.4 bits (99), Expect = 0.075, Method: Composition-based stats. Identities = 13/129 (10%), Positives = 40/129 (31%), Gaps = 10/129 (7%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 +++K+ L + R + +++ + A ++ + +A Sbjct: 7 KIFKYLLGLSLINNFFIPNSSVAFFPRINEPNQQEFESTSKQIGKTAKQLIQFGEYKEAI 66 Query: 78 EYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 + + P A Q+ + A ++ + P++ ++ Y+ Sbjct: 67 KILKLALKLNPTEETLWTT-----LADAQFKSKDSNNALLSLDKVLVINPKNASI---YF 118 Query: 136 LVGMSYAQM 144 G Y + Sbjct: 119 AKGSIYMNL 127 >gi|148656866|ref|YP_001277071.1| hypothetical protein RoseRS_2749 [Roseiflexus sp. RS-1] gi|148568976|gb|ABQ91121.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1] Length = 615 Score = 42.4 bits (99), Expect = 0.075, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 8/120 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 QS+ D + ++ E Y ++A F + + A F + P V L+ Sbjct: 378 QSAIDDFTKALALDPDNVEAYHQRARAFYRLNQYDAAIRDFTEALERDPNNDV---ILMR 434 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 +Y +A + ++ + P +V + YY + Q + + L Sbjct: 435 RGVAYRDNRQYDEALADFDQSLQLNP---DVSFTYYHRAL-LFQATGKLDRARADFDRAL 490 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 19/145 (13%), Positives = 38/145 (26%), Gaps = 26/145 (17%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-- 90 +G Q++ D + +A + F A + F + P Sbjct: 337 LAAIGSLGQAAERYTEAIRADPSSFEAYFGRAQVNFNLSLFQSAIDDFTKALALDPDNVE 396 Query: 91 GVARKSLLMSAFVQYSAGKYQQAA----SLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 +++ Y +Y A E N D + G++Y Sbjct: 397 AYHQRAR-----AFYRLNQYDAAIRDFTEALER-------DPNNDVILMRRGVAY----- 439 Query: 147 DVPYDQRATKLMLQYMSRIVERYTN 171 D R L + ++ + Sbjct: 440 ---RDNRQYDEALADFDQSLQLNPD 461 >gi|153809210|ref|ZP_01961878.1| hypothetical protein BACCAC_03521 [Bacteroides caccae ATCC 43185] gi|149128186|gb|EDM19406.1| hypothetical protein BACCAC_03521 [Bacteroides caccae ATCC 43185] Length = 596 Score = 42.4 bits (99), Expect = 0.076, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 61/198 (30%), Gaps = 36/198 (18%) Query: 61 YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y + ++ L ++ KA + FP + L + KY S Sbjct: 128 YSQGLVSLYQQQNELDKAVTLLEEMVTRFPT---KQDPLFNLLDIYGRQEKYSDVISTLN 184 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + +++ + + + Y QM D K Q + +V Y A Sbjct: 185 RLEKRLGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVNEYP-------A 226 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 +V +G YL+ G+ A +Q VL+ D A+ + Y Sbjct: 227 DMR----------YQVILGDVYLQNGKKEEAYEAYQKVLSVEPD---NPMALFSMASYYE 273 Query: 239 ALALMDEAREVVSLIQER 256 + ++ + + Sbjct: 274 QTGQKELYQQQLDTLLLN 291 >gi|320586169|gb|EFW98848.1| transcriptional corepressor [Grosmannia clavigera kw1407] Length = 870 Score = 42.0 bits (98), Expect = 0.077, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 44/140 (31%), Gaps = 22/140 (15%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSA 107 D + Y ++ +Q + KAYE + Q P + Y Sbjct: 281 AADNNDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYREGRNP-TFWC-----SIGVLYYQI 334 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y+ A I P + V+Y +G Y + L R E Sbjct: 335 NQYRDALDAYSRAIRLNP---FISEVWYDLGTLYESCNNQIS-------DALDAYQRAAE 384 Query: 168 RYTNSPYVKGARFYVTVGRN 187 N+P++ + + + RN Sbjct: 385 LDPNNPHI---KARLQLLRN 401 >gi|294140563|ref|YP_003556541.1| hypothetical protein SVI_1792 [Shewanella violacea DSS12] gi|293327032|dbj|BAJ01763.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 246 Score = 42.0 bits (98), Expect = 0.077, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 39/124 (31%), Gaps = 22/124 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 KY +A +I +YP+S Y +G + + + Sbjct: 138 KQRKYDEAIPAFRGFIKKYPDSTYAANANYWLGQLLYNK--------SEFESAKKAFDTV 189 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V R+ +S + + + K G AA +Q V+ Y+++ Sbjct: 190 VNRFKDSNKRADSLVKLGMIAE--------------KVGTVSAAKVYYQQVIKEYANSAA 235 Query: 226 AEEA 229 + A Sbjct: 236 SRLA 239 >gi|21232652|ref|NP_638569.1| hypothetical protein XCC3223 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767264|ref|YP_242026.1| hypothetical protein XC_0932 [Xanthomonas campestris pv. campestris str. 8004] gi|21114458|gb|AAM42493.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572596|gb|AAY48006.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 604 Score = 42.0 bits (98), Expect = 0.077, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 36/117 (30%), Gaps = 9/117 (7%) Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLD-SVTDVRYQREVYEKAVLFLK 69 +F A L F + VG Q ++ + Q++ + V + Sbjct: 312 LFPVMALALLAFRRRAAVMVLALLCVGPFVQPAQAAEGTLWQRADQVQQQRLDAGVQAYR 371 Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 + +F+ A + F + G+Y A + + + Q P+ Sbjct: 372 KGDFAAAQKAFEAVP--------TDQGWYNLGNALARQGRYDDAIAAYDRALRQQPQ 420 >gi|119628672|gb|EAX08267.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_b [Homo sapiens] Length = 795 Score = 42.0 bits (98), Expect = 0.077, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 22/238 (9%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 437 QKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 496 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 497 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 549 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 ++ + +N V Y + Y M ++++ ++V P Sbjct: 550 FLKLHAILRNSAEVLYQIANIYELM--------ENPSQAIEWLMQVVSVIPTDP---QVL 598 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVLANYSDAEHAEEAMARLVEA 236 + ++ K + +YY + Y I + + A Y D + E+A+ A Sbjct: 599 SKLGELYDREGDKS-QAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERA 655 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 65/222 (29%), Gaps = 67/222 (30%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KAV +L+++++++A E + V + + + Y + QA+S Sbjct: 429 NKAVTYLRQKDYNQAVEILKVLEKKD--NRVKSAAATNLSALYYMGKDFAQASSYADIAV 486 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 487 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 542 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y Sbjct: 543 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 578 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AI V++ +++L E Y +A + Sbjct: 579 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 617 >gi|268589508|ref|ZP_06123729.1| tetratricopeptide repeat protein [Providencia rettgeri DSM 1131] gi|291315177|gb|EFE55630.1| tetratricopeptide repeat protein [Providencia rettgeri DSM 1131] Length = 390 Score = 42.0 bits (98), Expect = 0.078, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 57/188 (30%), Gaps = 28/188 (14%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ + +A F Q + + F A +SLL + +A + + Sbjct: 115 GRDYMAAGVYDRAENMFQQLTDEVDFKQSALQSLLNI---YQLTSDWTKAIETAGKLVKL 171 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 + + I + +L + + ++ A Sbjct: 172 --GHTEL-----------REQIAHFYCELATQQLASDDLEDAL------IFLNKAEQ--- 209 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 N A + GR ++++G Y AI + V D E E + L + Y Sbjct: 210 -ADNHCARVSIMKGRLFIEQGNYDKAIHVLKQVYE--QDRELVAETLPLLFDCYQHTGQA 266 Query: 244 DEAREVVS 251 DE + + Sbjct: 267 DEWEDYLR 274 >gi|198437128|ref|XP_002129989.1| PREDICTED: similar to ring finger protein 127 isoform 2 [Ciona intestinalis] Length = 758 Score = 42.0 bits (98), Expect = 0.078, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 46/147 (31%), Gaps = 23/147 (15%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V+ + R + + + L +Q + KA E FN+ P + + L A + Sbjct: 174 VFESWHKNEWQGRALTTEGIALLCKQEYKKAIEKFNKALELVPQSH---SAFLHRAKANF 230 Query: 106 SAGKYQQAASLGEEYITQYPES---KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 S G Y+ A S YY+ G Q+ + L Y Sbjct: 231 SLGNYEAALRDATR------ASVVAHKSPEAYYVKGEILYQLD--------YVEEALFYF 276 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQL 189 ++ +S K A+ L Sbjct: 277 --LICVLLDSS-RKDAKKRTHEIITTL 300 >gi|198437126|ref|XP_002129971.1| PREDICTED: similar to ring finger protein 127 isoform 1 [Ciona intestinalis] Length = 768 Score = 42.0 bits (98), Expect = 0.078, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 46/147 (31%), Gaps = 23/147 (15%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V+ + R + + + L +Q + KA E FN+ P + + L A + Sbjct: 174 VFESWHKNEWQGRALTTEGIALLCKQEYKKAIEKFNKALELVPQSH---SAFLHRAKANF 230 Query: 106 SAGKYQQAASLGEEYITQYPES---KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 S G Y+ A S YY+ G Q+ + L Y Sbjct: 231 SLGNYEAALRDATR------ASVVAHKSPEAYYVKGEILYQLD--------YVEEALFYF 276 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQL 189 ++ +S K A+ L Sbjct: 277 --LICVLLDSS-RKDAKKRTHEIITTL 300 >gi|254411497|ref|ZP_05025274.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] gi|196181998|gb|EDX76985.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] Length = 703 Score = 42.0 bits (98), Expect = 0.078, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 74/252 (29%), Gaps = 45/252 (17%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + IA+ + G + V + + + + Y + L+ + + A +N+ Sbjct: 302 LIVVLLIAMAVIAGGGGAT---VAIINWINSTNATQSYNRGETLLELRRYEDALSAYNRA 358 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMS 140 P A + L + G+ + A ++ I YPE + G + Sbjct: 359 VELQP--DYAE-AWLGQGDALLALGQSEAALDAYDQAIQIQREYPE------AWKGRGEA 409 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 A + R + + ++ + R V Sbjct: 410 LAALQR--------YEAAISAFDQVTKLQPEDVETWERRGMVQ----------------- 444 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 +K Y AAI + L + A R A L +EA + E P Sbjct: 445 MKLQRYSAAIASYDKALEIQPNYSS---AWYRRGWALHNLQQYEEAIKSYDKAVEHKPDS 501 Query: 261 --YWARYVETLV 270 YW + V Sbjct: 502 AEYWYQRGNAFV 513 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 35/101 (34%), Gaps = 10/101 (9%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + + + +A F Q + P + ++ A+ + +Y +A E+ Sbjct: 540 YSQGSILNNLNQYQEALAAFEQAVKLQPNSY---EAWYGRAWALHQLQRYDEALMAYEKA 596 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKL 157 + P S+ +Y G + + + YDQ Sbjct: 597 VKLRPNSEQ---AWYNRGNVFYTLEQYQDAIAAYDQAVAHK 634 >gi|195336539|ref|XP_002034893.1| GM14398 [Drosophila sechellia] gi|194127986|gb|EDW50029.1| GM14398 [Drosophila sechellia] Length = 1152 Score = 42.0 bits (98), Expect = 0.078, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 53/141 (37%), Gaps = 24/141 (17%) Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179 Y L+ + + RD +++ + L +++ + + + Sbjct: 601 AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHK 660 Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 V R+ A +E + I Y+++ +Y++AI ++ + + + E Sbjct: 661 GCVIEARDIFAQVREATADFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNV-EV 719 Query: 230 MARLVEAYVALALMDEAREVV 250 M L AY+ + +A+ V+ Sbjct: 720 MQYLARAYLRANKLVDAKAVL 740 >gi|28574254|ref|NP_788449.1| CG2469, isoform B [Drosophila melanogaster] gi|28574256|ref|NP_788448.1| CG2469, isoform A [Drosophila melanogaster] gi|7292059|gb|AAF47472.1| CG2469, isoform B [Drosophila melanogaster] gi|17862386|gb|AAL39670.1| LD24034p [Drosophila melanogaster] gi|23092752|gb|AAN11469.1| CG2469, isoform A [Drosophila melanogaster] gi|220947488|gb|ACL86287.1| CG2469-PA [synthetic construct] Length = 1150 Score = 42.0 bits (98), Expect = 0.078, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 53/141 (37%), Gaps = 24/141 (17%) Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179 Y L+ + + RD +++ + L +++ + + + Sbjct: 601 AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHK 660 Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 V R+ A +E + I Y+++ +Y++AI ++ + + + E Sbjct: 661 GCVIEARDIFAQVREATADFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNV-EV 719 Query: 230 MARLVEAYVALALMDEAREVV 250 M L AY+ + +A+ V+ Sbjct: 720 MQYLARAYLRANKLVDAKAVL 740 >gi|284098534|ref|ZP_06385920.1| hypothetical protein POR_0516 [Candidatus Poribacteria sp. WGA-A3] gi|283830472|gb|EFC34663.1| hypothetical protein POR_0516 [Candidatus Poribacteria sp. WGA-A3] Length = 439 Score = 42.0 bits (98), Expect = 0.079, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 8/97 (8%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A K L A + Y A L ++ +P+S + + +Y + Sbjct: 10 AEKRSLDQAEHAFLRADYATAVVLLNRFLRTHPQSSLSPEARWWLARAYQKT-------- 61 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 L++ + + + Y ARF T +L Sbjct: 62 GNPSSALEHFRFVAKTRRWNMYQTDARFRATQLEERL 98 Score = 38.9 bits (90), Expect = 0.71, Method: Composition-based stats. Identities = 8/60 (13%), Positives = 21/60 (35%), Gaps = 1/60 (1%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A +++ A N+ R P + ++ ++ A G A ++ Sbjct: 16 DQAEHAFLRADYATAVVLLNRFLRTHPQSSLSPEARWWLARAYQKTGNPSSALEHF-RFV 74 >gi|254569172|ref|XP_002491696.1| General transcriptional co-repressor, acts together with Tup1p [Pichia pastoris GS115] gi|238031493|emb|CAY69416.1| General transcriptional co-repressor, acts together with Tup1p [Pichia pastoris GS115] gi|328351799|emb|CCA38198.1| General transcriptional corepressor CYC8 [Pichia pastoris CBS 7435] Length = 807 Score = 42.0 bits (98), Expect = 0.079, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 41/137 (29%), Gaps = 25/137 (18%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109 D + Y+ + + +++ AY+ + Q P + Y + Sbjct: 303 DNSDAQTWYQLGRVHMSRGDYTSAYDAYQQAVNRDARNP-TFWC-----SIGVLYYQISQ 356 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIV 166 Y+ A I P + V+Y +G Y I D L + Sbjct: 357 YRDALDAYTRAIRLNP---YISEVWYDLGTLYETCNNQISD----------ALDAYKQAA 403 Query: 167 ERYTNSPYVKGARFYVT 183 N+P+++ + Sbjct: 404 TLDPNNPHIQERLNQLI 420 >gi|86607598|ref|YP_476360.1| Slt family transglycosylase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556140|gb|ABD01097.1| transglycosylase, SLT family [Synechococcus sp. JA-2-3B'a(2-13)] Length = 711 Score = 42.0 bits (98), Expect = 0.079, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 65/229 (28%), Gaps = 29/229 (12%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG---VARKSLLMSAFVQY 105 D + + +A L+ A + P ++ A+ Q Sbjct: 51 DPTQLPQTSTTAFLRAYAALQAGQAQSALKDLQGLEESLPVLREEIWKLRAQ---AYEQL 107 Query: 106 SAGKYQQAA--SLGEEYITQYPESKNVDYVYYLVGMSY--AQMIRDVPYDQRATK----- 156 + Q + +YP S Y + +G Q P RA K Sbjct: 108 QDKETAQGIWWPQI---LQEYPHSPVAAYALWGMGQVDRLRQQFPTHPLTGRALKHLLEL 164 Query: 157 --LMLQYMSRIVERYTNSPYVKGARFYVTVGRN-QLAAKEVEI-GRYYLKRGEYVAAIPR 212 + + + + +P + + L A + +I Y ++ EY A Sbjct: 165 NPDRYDLLRDLAQHHPQTPGLTPLLDRWRQAQEGSLTASDWQILADAYWEQREYGKAA-- 222 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y A + + R ++ +A+ + ++P G Sbjct: 223 -----RAYGRAPATSQNLYRWGRSHQISREFPQAKAAYQALLAQFPDGP 266 >gi|291566860|dbj|BAI89132.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 340 Score = 42.0 bits (98), Expect = 0.080, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 77/209 (36%), Gaps = 41/209 (19%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARK-SLLMSAFVQYSAGKYQQAASLG 117 Y + + +A +++ ++ P F + +LLMS G++++A Sbjct: 129 YGRGNALSSLSQYDEAIASYDRATQLQPNFHPAWRDRGALLMSI------GRHEEALQAF 182 Query: 118 EEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV- 175 + + P+ DY ++YL G + D P + +R + + Sbjct: 183 DRLLQIQPD----DYGIWYLRGNILMNHLDDYP-------EAAKSYTRAINIKPDFTPAL 231 Query: 176 ---KGARFYVTVGRNQLA-----------AKEVEI--GRYYLKRGEYVAAIPRFQLVLAN 219 A F + +A +E + G+ +++ Y A+ + + Sbjct: 232 TAQAQALFRLGDYGEAIASVDESLHHNPHQREAWVLRGQIFMEIKRYAQALNAYNRAI-- 289 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEARE 248 Y D+ H++ + + + AY+ EA++ Sbjct: 290 YLDSNHSQSWLGKAI-AYLRQGRDQEAKD 317 >gi|282891454|ref|ZP_06299949.1| hypothetical protein pah_c173o008 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498637|gb|EFB40961.1| hypothetical protein pah_c173o008 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 675 Score = 42.0 bits (98), Expect = 0.080, Method: Composition-based stats. Identities = 10/70 (14%), Positives = 29/70 (41%), Gaps = 3/70 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +Y + L+ ++F A + + P + + ++LL + + ++ ++ Sbjct: 142 EGLYNLGIGMLRLKDFDAAEQLLRKVISQAP-SHL--EALLNLGICLFQIHRNEEVVAIC 198 Query: 118 EEYITQYPES 127 E +T +P Sbjct: 199 ERILTIHPNH 208 >gi|154252571|ref|YP_001413395.1| Tol-Pal system YbgF [Parvibaculum lavamentivorans DS-1] gi|154156521|gb|ABS63738.1| Tol-Pal system YbgF [Parvibaculum lavamentivorans DS-1] Length = 301 Score = 42.0 bits (98), Expect = 0.080, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 43/137 (31%), Gaps = 14/137 (10%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 SV + Y+ A+ +K + +A F + + P +A + Y+ Sbjct: 170 SVLPSGTPQTQYDFAIDLMKRGQYPQARTAFLEFLQLHPKHELAGNAQYWLGETYYAENN 229 Query: 110 YQQAASLGEEYIT---QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y+QA ++ Y S +GMS + + T + Sbjct: 230 YKQAGDA---FLNGYTTYASSSKAPDSLLKLGMSLSAL--------GNTDAACTVWGELG 278 Query: 167 ERYTNSPYVKGARFYVT 183 R+ + AR + Sbjct: 279 SRFPQASPSIVARAKLE 295 Score = 40.1 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 33/105 (31%), Gaps = 14/105 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 ++ + A++++ G Y Y A F Sbjct: 195 QARTAFLEFLQLHPKHELAGNAQYWL--------------GETYYAENNYKQAGDAFLNG 240 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y+ + A +++ +L + AL D A V + R+PQ Sbjct: 241 YTTYASSSKAPDSLLKLGMSLSALGNTDAACTVWGELGSRFPQAS 285 >gi|300865159|ref|ZP_07109983.1| hypothetical protein OSCI_1490019 [Oscillatoria sp. PCC 6506] gi|300336849|emb|CBN55133.1| hypothetical protein OSCI_1490019 [Oscillatoria sp. PCC 6506] Length = 1093 Score = 42.0 bits (98), Expect = 0.081, Method: Composition-based stats. Identities = 21/185 (11%), Positives = 60/185 (32%), Gaps = 22/185 (11%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++Q + ++ F + P F + G+ +A + Sbjct: 75 GDALAQQQEWEESIAAFRKAIELNPEHFGSY-----VGLGNSLAKLGQLDEAIAAYRRAS 129 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P+++ + Y + + +++E ++ A Sbjct: 130 ELNPDAEWIHYAL-AKAL--------QQRTHSDVVEAIASYRQMIELNPDN---VEAYQN 177 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 + ++ +++G +++G+ AI ++ ++ + H + A L E L Sbjct: 178 LLQLQSDNWELWLQLGNTLVQQGKLEEAIAAYRRLIEHNP---HNQTAYYGLGECLAKLG 234 Query: 242 LMDEA 246 ++EA Sbjct: 235 QLEEA 239 >gi|153214277|ref|ZP_01949294.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|124115425|gb|EAY34245.1| conserved hypothetical protein [Vibrio cholerae 1587] Length = 254 Score = 42.0 bits (98), Expect = 0.081, Method: Composition-based stats. Identities = 20/152 (13%), Positives = 58/152 (38%), Gaps = 10/152 (6%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAG 91 + S+ + + + ++ Y+ AV LK+++++ A F + D+P + Sbjct: 112 AGVGQLPTSSNDEAAQGTFSSNANEQAAYQNAVDLILKKRDYAGAIAAFQKFQTDYPNST 171 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 + + + ++ + ++AA ++ +K D + + D+ Sbjct: 172 FSANAHYWLGQLYFAKKEDKEAAKSFAAVVSDKGSNKRAD------ALV---KLGDIAKR 222 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 + ++ + V+ Y +S K A+ + Sbjct: 223 NNNAEQARKFYQQAVDEYPDSASAKIAKENLK 254 Score = 38.9 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + Y NS + A +++ G+ Y Sbjct: 140 YQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSANAHYWL--------------GQLYF 185 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + E A F V+++ + +A+ +L + ++AR+ + YP Sbjct: 186 AKKEDKEAAKSFAAVVSD-KGSNKRADALVKLGDIAKRNNNAEQARKFYQQAVDEYPDSA 244 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 245 SAKIAKENLK 254 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 39/126 (30%), Gaps = 27/126 (21%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A + +++ T YP S +Y +G Y D K + + + Sbjct: 149 KKRDYAGAIAAFQKFQTDYPNSTFSANAHYWLGQLYFAKKED--------KEAAKSFAAV 200 Query: 166 VERYTNSPYVKGARFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 V ++ A + RN A + A +Q + Y D+ Sbjct: 201 VSDKGSNKRA-DALVKLGDIAKRNNNAEQ----------------ARKFYQQAVDEYPDS 243 Query: 224 EHAEEA 229 A+ A Sbjct: 244 ASAKIA 249 >gi|119498417|ref|XP_001265966.1| serine/threonine protein phosphatase PPT1 [Neosartorya fischeri NRRL 181] gi|119414130|gb|EAW24069.1| serine/threonine protein phosphatase PPT1 [Neosartorya fischeri NRRL 181] Length = 478 Score = 42.0 bits (98), Expect = 0.081, Method: Composition-based stats. Identities = 16/149 (10%), Positives = 46/149 (30%), Gaps = 27/149 (18%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYSAG 108 +D+ + + E + A +++ Q + P + + ++ Sbjct: 4 SDLEAATALKVQGNKAFAEHEWPTAVDFYTQAIDKYDREP-SFFSNRAQ-----AYIKLE 57 Query: 109 KYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y A + + + P Y Y+ ++ ++ + L+ +V Sbjct: 58 AYGFAIADATKALELDPS-----YVKAYWRRALANTAILN--------YREALKDFKTVV 104 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 ++ N+ A+ + + E E Sbjct: 105 KKEPNNR---DAKLKLAECEKLVRRLEFE 130 >gi|90082525|dbj|BAE90444.1| unnamed protein product [Macaca fascicularis] Length = 499 Score = 42.0 bits (98), Expect = 0.081, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 47/148 (31%), Gaps = 31/148 (20%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF----VQ-YSA 107 + E+ +A + K +++ A ++++Q P +S A+ Y+ Sbjct: 26 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLRTECYGYAL 82 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G +A L ++YI YY S + + L+ +V+ Sbjct: 83 GDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAALRDYETVVK 124 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + A+ + K E Sbjct: 125 VKPHDK---DAKMKYQECNKIVKQKAFE 149 >gi|71022837|ref|XP_761648.1| hypothetical protein UM05501.1 [Ustilago maydis 521] gi|14279385|gb|AAK58576.1|AF268097_1 TPR-containing protein Mql1 [Ustilago maydis] gi|46101125|gb|EAK86358.1| hypothetical protein UM05501.1 [Ustilago maydis 521] Length = 1292 Score = 42.0 bits (98), Expect = 0.081, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 49/150 (32%), Gaps = 36/150 (24%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL----------MSA 101 +D + Y ++ QN++KAYE + ++++ Sbjct: 392 SDPNDAQSWYLLGRAYMAGQNYNKAYEAY-------------QQAVYRDGKNPTFWCSIG 438 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + Y +Y+ A I P + V++ +G S + + D + Sbjct: 439 VLYYQINQYRDALDAYSRAIRLNP---YISEVWFDLG-SLYEACNNQISD------AIHA 488 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 R + ++P + + + RN A Sbjct: 489 YERAADLDPDNP---QIQQRLQLLRNAEAK 515 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 64/200 (32%), Gaps = 51/200 (25%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 +++ +A + R P++ A + A V + +++A + + PE+ + Sbjct: 161 EDYDRALSAYEAALRHNPYSVPALSA---IAGVHRTLDNFEKAVDYFQRVLNIVPENGDT 217 Query: 131 ----------------DYVYYLVGMSYAQMIR--------DVPYDQ-RATKLMLQYMSRI 165 Y Y + + + + YD+ + + + + + Sbjct: 218 WGSMGHCYLMMDDLQRAYTAYQQALYHLPNPKEPKLWYGIGILYDRYGSLEHAEEAFASV 277 Query: 166 VERYTNSPYVKGARFYVTVGRNQL----AAKE-------------------VEIGRYYLK 202 V N F + + Q A+ E +IG Y + Sbjct: 278 VRMDPNYEKANEIYFRLGIIYKQQNKFPASLECFRYILDNPPRPLTEIDIWFQIGHVYEQ 337 Query: 203 RGEYVAAIPRFQLVLANYSD 222 + E+ AA ++ VLA + Sbjct: 338 QKEFNAAKEAYERVLAENPN 357 >gi|332257109|ref|XP_003277658.1| PREDICTED: serine/threonine-protein phosphatase 5 isoform 2 [Nomascus leucogenys] Length = 477 Score = 42.0 bits (98), Expect = 0.082, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 50/166 (30%), Gaps = 34/166 (20%) Query: 40 RQSSRDVYLDSVTDV---RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VAR 94 R + D + E+ +A + K +++ A ++++Q P Sbjct: 8 RTDCAEPPRDEPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGN 67 Query: 95 KSLLMSAF----VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 +S A+ Y+ G +A L ++YI YY S + Sbjct: 68 RS---LAYLRTECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL----- 109 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + L+ +V+ + A+ + K E Sbjct: 110 ---GKFRAALRDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149 >gi|326315755|ref|YP_004233427.1| hypothetical protein Acav_0937 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372591|gb|ADX44860.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 667 Score = 42.0 bits (98), Expect = 0.082, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 16/115 (13%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A + F A + FN P + + LL G ++A ++ ++ I Sbjct: 556 RAESAIGANRFDDAIKDFNALL---PASPSNPRLLLGLGMAHVGKGDTREAIAMFDQLIA 612 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-NSPYVK 176 + N YY M+Y R L+ + + + N Y + Sbjct: 613 ---RAPNAA-AYYGRAMAY--------RGARQYAASLKDLDQAIRLDPRNPQYAQ 655 >gi|317048291|ref|YP_004115939.1| tetratricopeptide repeat-containing protein [Pantoea sp. At-9b] gi|316949908|gb|ADU69383.1| tetratricopeptide repeat protein [Pantoea sp. At-9b] Length = 389 Score = 42.0 bits (98), Expect = 0.082, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 68/189 (35%), Gaps = 42/189 (22%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ + +A + F+Q + F ++ L+ + +QQA + E+ + Sbjct: 114 GRDYMAAGLYDRAEDMFSQLVDETDF-RISALQQLLLI--HQATSDWQQAIEVAEKLVKL 170 Query: 124 YPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 K+ G +++ +L LQ +S + Sbjct: 171 ---GKDK-----QKGEIAHF-----------YCELALQALS-----------SDDLDRAM 200 Query: 183 TVGRN------QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 T+ + Q A + GR ++++GEY A+ R Q VL D E EA+ L Sbjct: 201 TLLKKGEAADRQSARVSIMTGRIFMEQGEYTKAVERLQRVLE--QDKELVSEALPMLETC 258 Query: 237 YVALALMDE 245 Y L ++ Sbjct: 259 YQRLNQPEQ 267 >gi|239908968|ref|YP_002955710.1| putative N-acetylmuramoyl-L-alanine amidase [Desulfovibrio magneticus RS-1] gi|239798835|dbj|BAH77824.1| putative N-acetylmuramoyl-L-alanine amidase [Desulfovibrio magneticus RS-1] Length = 642 Score = 42.0 bits (98), Expect = 0.082, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 7/92 (7%) Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y+ AASL +P D + A+ ++ + +V Sbjct: 116 DADYEAAASLYGRLAQSFPTHAWADDALLRRAVILAENLKRP-------LEAKADLETLV 168 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 +Y AR ++ + AAK+ E + Sbjct: 169 RKYPKGDMAAQARKFLAAFGDAPAAKQAEPAK 200 >gi|206890693|ref|YP_002248466.1| soluble lytic murein transglycosylase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742631|gb|ACI21688.1| soluble lytic murein transglycosylase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 636 Score = 42.0 bits (98), Expect = 0.082, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 25/71 (35%), Gaps = 2/71 (2%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 K L NF KA EY + F + LL A +Y++A E Sbjct: 32 KGKNSLNSGNFQKAEEYLTK--SLQEFKEIGDYILLWRANAYKKMNRYEEALKDINELKR 89 Query: 123 QYPESKNVDYV 133 YP+S + Sbjct: 90 NYPKSPLIKDA 100 >gi|218780317|ref|YP_002431635.1| hypothetical protein Dalk_2474 [Desulfatibacillum alkenivorans AK-01] gi|218761701|gb|ACL04167.1| protein of unknown function DUF181 [Desulfatibacillum alkenivorans AK-01] Length = 574 Score = 42.0 bits (98), Expect = 0.082, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 49/143 (34%), Gaps = 19/143 (13%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ V ++ + A F + P A L+ G+YQ+A + ++ Sbjct: 427 IFNIGVQYMALGDPETALTCFKKAMEFDPEPEDAPSILVYMGVALKDMGRYQEALGILKK 486 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS--PYVKG 177 P+ + + L+G Y + R + + ++++ S Y Sbjct: 487 AEAMDPDRTD---CHNLMGFCYFSLRRH--------EEAIASFQKVIDLDPGSAIDYANI 535 Query: 178 ARFYVTVGRNQLAAKEVEIGRYY 200 A Y + E+ I +YY Sbjct: 536 ASNYRD-----MGETEMAI-QYY 552 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 47/147 (31%), Gaps = 21/147 (14%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-- 97 + + D + VY V + +A + P ++ Sbjct: 445 TCFKKAMEFDPEPEDAPSILVY-MGVALKDMGRYQEALGILKKAEAMDP-----DRTDCH 498 Query: 98 -LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 LM F +S ++++A + ++ I P S +DY I D T+ Sbjct: 499 NLM-GFCYFSLRRHEEAIASFQKVIDLDPGS-AIDYA----------NIASNYRDMGETE 546 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVT 183 + +QY + + + + + + Sbjct: 547 MAIQYYKQALALDPSIDFARANLERLA 573 >gi|327191083|gb|EGE58135.1| putative exported protein, TonB-dependent receptor [Rhizobium etli CNPAF512] Length = 1226 Score = 42.0 bits (98), Expect = 0.083, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 74/238 (31%), Gaps = 42/238 (17%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 + + Y D T + ++ A L + +A E D P ++ ++ + Sbjct: 356 KKAEQRYPDDPTLPAVRAQL---AQLTDDREQMKEAIERSLALDPDHPM-ALSARAEYKA 411 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A+ A + I P G + + D A Sbjct: 412 AY----ESDIGGALADLNRAIELAPGDS---------GSLNSLGLLQSSRD--ANGEAET 456 Query: 161 YMSRIVERYTNSP--YVKGARFYVTVGRNQLAAKEVEIG---------------RYYLKR 203 + +E +P + A Y+ R + A +E++ RYYL+ Sbjct: 457 AFKKAIELDPQNPILHANLAMLYLDQSRTKEAKREIDTAIALDPSFDIALLVRGRYYLQI 516 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM---DEAREVVSLIQERYP 258 GE A+ + +LA + ++ L A+ ++A + + + P Sbjct: 517 GERDKAL---EDLLAASTANPAHSQSQLMLAAAHYEKGDRLPAEQALDNADRLDKNDP 571 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 6/83 (7%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 +++ R++ D + + + +L+ KA E S P +S LM Sbjct: 486 KEAKREIDTAIALDPSFDIALLVRGRYYLQIGERDKALEDLLAASTANPAHS---QSQLM 542 Query: 100 SAFVQYSAGK---YQQAASLGEE 119 A Y G +QA + Sbjct: 543 LAAAHYEKGDRLPAEQALDNADR 565 >gi|300770943|ref|ZP_07080820.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] gi|300762216|gb|EFK59035.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] Length = 1023 Score = 42.0 bits (98), Expect = 0.083, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 10/79 (12%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + Y +A E ++ +YP + VY+ S +M + L Sbjct: 586 IYRDY-TKDPTEAIKAYENFLDRYPNTPAAAEVYF----SLYRMYEGIDK-----TKSLT 635 Query: 161 YMSRIVERYTNSPYVKGAR 179 Y ++++ + N+ + A+ Sbjct: 636 YKNKLITLFPNTIHAHVAQ 654 >gi|109125223|ref|XP_001111749.1| PREDICTED: serine/threonine-protein phosphatase 5 isoform 4 [Macaca mulatta] Length = 499 Score = 42.0 bits (98), Expect = 0.083, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 47/148 (31%), Gaps = 31/148 (20%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF----VQ-YSA 107 + E+ +A + K +++ A ++++Q P +S A+ Y+ Sbjct: 26 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLRTECYGYAL 82 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G +A L ++YI YY S + + L+ +V+ Sbjct: 83 GDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAALRDYETVVK 124 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + A+ + K E Sbjct: 125 VKPHDK---DAKMKYQECNKIVKQKAFE 149 >gi|160878633|ref|YP_001557601.1| TPR repeat-containing protein [Clostridium phytofermentans ISDg] gi|160427299|gb|ABX40862.1| Tetratricopeptide TPR_2 repeat protein [Clostridium phytofermentans ISDg] Length = 469 Score = 42.0 bits (98), Expect = 0.083, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 +E Y++ +++++ KA ++ + F +L + G+Y++A + Sbjct: 387 AAKEAYQQGRAAFEKKDYEKA---LTLLTQAYSFGDPDDNTLYYLGKTEQELGQYEEAKA 443 Query: 116 LGEEYITQYPESKNVDYV 133 + + +P S Y Sbjct: 444 YYNQMLESFPNSSLAKYA 461 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 49/128 (38%), Gaps = 4/128 (3%) Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-VEIGRY 199 Y ++ T + +S++ + V + +AAKE + GR Sbjct: 338 YMELESTNSLTPENTMEVADLLSKVDPSKMENQDAVKLFEMVKEKVSPIAAKEAYQQGRA 397 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 ++ +Y A+ L+ YS + + + L + L +EA+ + + E +P Sbjct: 398 AFEKKDYEKAL---TLLTQAYSFGDPDDNTLYYLGKTEQELGQYEEAKAYYNQMLESFPN 454 Query: 260 GYWARYVE 267 A+Y + Sbjct: 455 SSLAKYAK 462 Score = 35.9 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 37/113 (32%), Gaps = 15/113 (13%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP-ESKNVDY 132 A + F + +A K + Y++A +L Y + D Sbjct: 370 QDAVKLFEMVKEK--VSPIAAKEAYQQGRAAFEKKDYEKALTLL---TQAYSFGDPD-DN 423 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 Y +G + ++ + Y ++++E + NS K A+ V Sbjct: 424 TLYYLGKTEQEL--------GQYEEAKAYYNQMLESFPNSSLAKYAKQRVNDL 468 >gi|86609376|ref|YP_478138.1| TPR domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557918|gb|ABD02875.1| TPR domain protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 182 Score = 42.0 bits (98), Expect = 0.083, Method: Composition-based stats. Identities = 14/110 (12%), Positives = 38/110 (34%), Gaps = 14/110 (12%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + L L + A ++ + P A + + ++V + ++A + E I Sbjct: 68 QGSLKLLRGDPVAALSDLDRAVQLDP--SYAP-AYVNRSYVYNQLRQPEEALADAERAIQ 124 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + Y+ G++Y Q+ + + + + ++ S Sbjct: 125 LNAG---IPEAYFSRGVAYLQLGDR--------EAAMADFRQALALFSKS 163 >gi|61680198|pdb|1WAO|1 Chain 1, Pp5 Structure gi|61680199|pdb|1WAO|2 Chain 2, Pp5 Structure gi|61680200|pdb|1WAO|3 Chain 3, Pp5 Structure gi|61680201|pdb|1WAO|4 Chain 4, Pp5 Structure Length = 477 Score = 42.0 bits (98), Expect = 0.083, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 47/148 (31%), Gaps = 31/148 (20%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF----VQ-YSA 107 + E+ +A + K +++ A ++++Q P +S A+ Y+ Sbjct: 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLRTECYGYAL 60 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G +A L ++YI YY S + + L+ +V+ Sbjct: 61 GDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAALRDYETVVK 102 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + A+ + K E Sbjct: 103 VKPHDK---DAKMKYQECNKIVKQKAFE 127 >gi|148265689|ref|YP_001232395.1| hypothetical protein Gura_3669 [Geobacter uraniireducens Rf4] gi|146399189|gb|ABQ27822.1| hypothetical protein Gura_3669 [Geobacter uraniireducens Rf4] Length = 76 Score = 42.0 bits (98), Expect = 0.083, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 30/83 (36%), Gaps = 15/83 (18%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + L + A+ F G + + +++E A K+ N A + Sbjct: 1 MRRVILLVLMLWALGF-AGCSGDNGK--------------QLFETAQFEEKQHNLEHAKQ 45 Query: 79 YFNQCSRDFPFAGVARKSLLMSA 101 + + ++ +P +K+ A Sbjct: 46 LYEEIAKKYPGGDYGKKAEERLA 68 >gi|332840996|ref|XP_003314116.1| PREDICTED: intraflagellar transport protein 88 homolog [Pan troglodytes] Length = 805 Score = 42.0 bits (98), Expect = 0.083, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 85/303 (28%), Gaps = 64/303 (21%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 409 QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 468 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 469 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 521 Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157 ++ + +N V Y + Y Q++ +P D + Sbjct: 522 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 581 Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196 QY + ++ + + A Y + + ++ + Sbjct: 582 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 641 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSL 252 + + G Q L Y D E + LV L L D A+E Sbjct: 642 ASCFRRSGN-------SQKALDTYKDTHRKFPENVECLRFLVRLCTDLGLKD-AQEYARK 693 Query: 253 IQE 255 ++ Sbjct: 694 LKR 696 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 67/222 (30%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---- 117 KAV +L+++++++A E + + V + + + Y + QA+S Sbjct: 401 NKAVTYLRQKDYNQAVEILKVLEKKD--SRVKSAAATNLSALYYMGKDFAQASSYADIAV 458 Query: 118 --EEYITQYP---ESK------NVDY-------------------VYYLVGMSYAQMIRD 147 + Y P +K N DY Y +G++Y ++ R Sbjct: 459 NSDRY---NPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNR- 514 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 L ++ NS A +I Y Sbjct: 515 -------LDEALDCFLKLHAILRNS-----------------AEVLYQIANIYELMENPS 550 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AI V++ +++L E Y +A + Sbjct: 551 QAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQY 589 >gi|300716699|ref|YP_003741502.1| Tetratricopeptide protein [Erwinia billingiae Eb661] gi|299062535|emb|CAX59652.1| Tetratricopeptide protein [Erwinia billingiae Eb661] Length = 508 Score = 42.0 bits (98), Expect = 0.083, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 43/132 (32%), Gaps = 29/132 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ ++++A +F P L Y+AG + A S ++ Sbjct: 336 QQGQRAFNRGDYAEAAAHFTN-----P---------LWRGIALYNAGDFPAATSA---FL 378 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P + + +G SYAQ Q+ + L + + + K R Sbjct: 379 QA-PATPDT---LLWIGNSYAQ--------QKQWQQALTSYDQALSLRPDWTMAKDNRAK 426 Query: 182 VTVGRNQLAAKE 193 + QL KE Sbjct: 427 IAHIIMQLRQKE 438 >gi|282901304|ref|ZP_06309230.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] gi|281193799|gb|EFA68770.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] Length = 543 Score = 42.0 bits (98), Expect = 0.083, Method: Composition-based stats. Identities = 18/147 (12%), Positives = 37/147 (25%), Gaps = 34/147 (23%) Query: 48 LDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYF-NQCSRDFPFAGVA--RKSLLMS--- 100 L + R E Y K + ++ A + + + ++ L Sbjct: 224 LPAPDMGRDVVEFYVKLGDKHFDDGDYIVAISNYSQALQNNKKNSYYQGELQAELNLSHK 283 Query: 101 -----------AF-----VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A+ Y G Y A + I N Y G+++ + Sbjct: 284 YTDNVGNIDIYAYYKLGLAYYKLGDYDMAIFNYNQVINANVNHSN---AYNKRGLAHYKS 340 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTN 171 R ++ S+ + Sbjct: 341 --------RNYHSAIEDFSQAISINPE 359 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 38/131 (29%), Gaps = 36/131 (27%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--------------MSAFVQ--- 104 +A ++ A E ++Q P + + +L + Sbjct: 366 NRAEARYLIGDYQGATEDYSQAVSIHP--DLLDQPILVEDLGELFNIKCHDEVIYKNRAD 423 Query: 105 --YSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 Y G Y++A + I N++Y YY G Y + + Sbjct: 424 HLYQLGAYEEALENYNQAIAL-----NINYVDAYYQRGKIYFNK--------GIYEAAVD 470 Query: 161 YMSRIVERYTN 171 S +++ N Sbjct: 471 DFSMVIKTQPN 481 >gi|291190309|ref|NP_001167232.1| intraflagellar transport protein 88 homolog [Salmo salar] gi|223648786|gb|ACN11151.1| Intraflagellar transport protein 88 homolog [Salmo salar] Length = 845 Score = 42.0 bits (98), Expect = 0.083, Method: Composition-based stats. Identities = 29/259 (11%), Positives = 78/259 (30%), Gaps = 55/259 (21%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLM 99 Q+ R L D + K ++++ KA E++ D + +L Sbjct: 467 QADRYADLAMTADRYNPAALINKGNTVFVKKDYEKAAEFYKEALRND---SSCTE-ALYN 522 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-------------AQMIR 146 G+ +++ ++ + +N V + + + Q+I Sbjct: 523 LGLTYKRLGRLEESLDC---FLKLHAILRNSAQVMWQLANLFEMLEDPHQAIEWLMQLIT 579 Query: 147 DVPYDQRAT-------------KLMLQYMSRIVERYT--------------NSPYVKGAR 179 P D + QY + ++ + + A Sbjct: 580 VTPTDPQVLAKLGELYDSEGDKSQAFQYYQESFRYFPSNIDVIEWLGAYYIDTQFCEKAI 639 Query: 180 F---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 T+ + ++ + Y + G Y A+ ++ + + + E + LV Sbjct: 640 QYFERATLIQPTQVKWQLMVASCYRRSGNYQKALETYKDIHRKFPE---NIECLRFLVRL 696 Query: 237 YVALALMDEAREVVSLIQE 255 + + E ++ + +++ Sbjct: 697 CTDMGMK-EVQDYATKLKK 714 >gi|145524245|ref|XP_001447950.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124415483|emb|CAK80553.1| unnamed protein product [Paramecium tetraurelia] Length = 1017 Score = 42.0 bits (98), Expect = 0.083, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 65/188 (34%), Gaps = 27/188 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 K +FL +Q +++A E F Q ++ L A KY QA L E + Sbjct: 241 AKGKIFLHQQKYAQAEEIFKQMK--------GVEAQLGLAQSCLKQKKYPQAIELYEAIL 292 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 +P++ + +G+ Y + + DQ +++E + A Sbjct: 293 KDHPKNLS---ALNNLGICYLENQK---LDQ-----AKDMFQKVIE---QNHDDMIAMSN 338 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 ++ +LA + + K+ ++ R ++ D A RL Y Sbjct: 339 LSDIEFKLAQQNKDG-----KQEAHIQETIRLSEIVTKSPDPFERAVAFNRLGACYQMQK 393 Query: 242 LMDEAREV 249 EA + Sbjct: 394 KYKEAEDA 401 >gi|313672599|ref|YP_004050710.1| hypothetical protein Calni_0635 [Calditerrivibrio nitroreducens DSM 19672] gi|312939355|gb|ADR18547.1| hypothetical protein Calni_0635 [Calditerrivibrio nitroreducens DSM 19672] Length = 892 Score = 42.0 bits (98), Expect = 0.084, Method: Composition-based stats. Identities = 27/236 (11%), Positives = 69/236 (29%), Gaps = 47/236 (19%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 + + A E N+ + FP + + + ++ ++ S G + I Sbjct: 656 RYLFENGDKKIALEQINKFLKSFPTSNYLKDAYILRGYINESLGFLDDCIKDADRVIDYN 715 Query: 125 PESKNVDYVYYLVGMSYAQMIRDV------PYDQRATKLMLQYMSRIVERYTN----SPY 174 P+ + YY+ + ++ + ++ + + IV + S Y Sbjct: 716 PKDEE---AYYIKAICSKKINKGTSLKIFEDLANKSVRFKEVSLKEIVSLSDDPAQISNY 772 Query: 175 VKGAR-----------FYV---TVGRNQLAAKEVEI-------------GRYYLK----- 202 + + + R + I YY K Sbjct: 773 LPQVKSIDILLYYKTLVRMLGLLEVRKDFPEYDKYIDELIASRDESFVPAGYYYKSVLMY 832 Query: 203 -RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + + A+ + + +A+ ++ Y + A++V +I+ Y Sbjct: 833 TKNDSKTALNYAMRCHYLFPKSPFTYKALQLAMQIYKKNNDQESAKKVEDIIK-NY 887 >gi|310824754|ref|YP_003957112.1| hypothetical protein STAUR_7530 [Stigmatella aurantiaca DW4/3-1] gi|309397826|gb|ADO75285.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 718 Score = 42.0 bits (98), Expect = 0.084, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 71/228 (31%), Gaps = 47/228 (20%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE--YIT-QYPESK 128 + +A E + +P ++++L + + Y A Y A E + YP+++ Sbjct: 77 DRKRAAESLLVVRKTYPETTASQEALYRAGVLFYEAEDYANARKSFNELLFENPIYPQAQ 136 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN- 187 +V + + A + Q +S + ER + + + Sbjct: 137 DV-----------KLKLARSALEVGAYRDAYQTLSSLAER-------AEGAERLKLLEDA 178 Query: 188 -QLAAK----------EVEIGRYYLKRGEYVAAIPRFQLVLA---NYSDAEHAEEAM--- 230 + A EVE+ E AA R + V+ ++ D E + Sbjct: 179 SRAAQGAGLYSSALTLEVELAEQAKTPEEQAAAAKRLEQVVEGRADFVDIARVAEGLSPR 238 Query: 231 --------ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 +L Y L E ++ P +A + L+ Sbjct: 239 HPAWPILTFKLARIYYHLRDWTRLEETLNRFLLEAPSHPFAAQAKELL 286 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 26/67 (38%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 Q +Y VLF + ++++ A + FN+ + P A+ L A G Y Sbjct: 93 PETTASQEALYRAGVLFYEAEDYANARKSFNELLFENPIYPQAQDVKLKLARSALEVGAY 152 Query: 111 QQAASLG 117 + A Sbjct: 153 RDAYQTL 159 >gi|289616291|emb|CBI57087.1| putative regulator of conidia morphology [Sordaria macrospora] Length = 886 Score = 42.0 bits (98), Expect = 0.084, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 46/146 (31%), Gaps = 28/146 (19%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSA 107 D + Y +++ Q + KAYE + Q P + Y Sbjct: 249 AADQTDAQSWYLLGRCYMQLQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQI 302 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSR 164 +Y+ A I P + V+Y +G Y I D L R Sbjct: 303 NQYRDALDAYSRAIRLNP---FISEVWYDLGTLYESCNNQISD----------ALDAYQR 349 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLA 190 E N+P++ + + + RN A Sbjct: 350 AAELDPNNPHI---KTRLQLLRNGQA 372 >gi|163942288|ref|YP_001647172.1| heat shock protein DnaJ domain-containing protein [Bacillus weihenstephanensis KBAB4] gi|163864485|gb|ABY45544.1| heat shock protein DnaJ domain protein [Bacillus weihenstephanensis KBAB4] Length = 397 Score = 42.0 bits (98), Expect = 0.084, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 49/129 (37%), Gaps = 14/129 (10%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 VY S+ + + +A+ + + +A N ++ + A + Sbjct: 59 VYDRSIQNGGEYDLLLNQALNYKNGSEYQEAINILNDLLINYSDSP---DVRYHLADCYF 115 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 G + A + +E I YP ++Y ++L+ + Y DQ+ + +++ Sbjct: 116 ELGWFTDAKTAIQELIFDYPS--VIEY-HFLLFLIY--------RDQQEYSKAIAQANKL 164 Query: 166 VERYTNSPY 174 ++ SPY Sbjct: 165 IKLQPQSPY 173 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 47/142 (33%), Gaps = 24/142 (16%) Query: 136 LVGMSYAQMIR-DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF-------------Y 181 + ++Y +++ + Q K Y + + Y+N Y + + Sbjct: 1 MNNLTYYELLEIEQSASQDEIKKA--YFRK-IRMYSNEKYPEEFKQLTKAYEELMNEEQR 57 Query: 182 VTVGRNQLAAKEVEI----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 R+ E ++ Y EY AI +L NYSD+ L + Y Sbjct: 58 AVYDRSIQNGGEYDLLLNQALNYKNGSEYQEAINILNDLLINYSDSPDVR---YHLADCY 114 Query: 238 VALALMDEAREVVSLIQERYPQ 259 L +A+ + + YP Sbjct: 115 FELGWFTDAKTAIQELIFDYPS 136 >gi|295092953|emb|CBK82044.1| hypothetical protein [Coprococcus sp. ART55/1] Length = 536 Score = 42.0 bits (98), Expect = 0.085, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 3/67 (4%) Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 Y + Y AAI VL D +++ A+ Y+ L+ + A V + + E Sbjct: 362 AIYKYETMTYEAAIDDLNRVL---QDTPNSDVALFYKAMCYLKLSDDNNATLVFNQLVEN 418 Query: 257 YPQGYWA 263 P + Sbjct: 419 CPNSVYY 425 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 32/104 (30%), Gaps = 20/104 (19%) Query: 89 FAGVARKSLLM--------SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + A + L + + +Y Y+ A + ++ N D + M Sbjct: 343 YGDYASQVLSDDNKARVQSAIY-KYETMTYEAAIDDLNRVLQ---DTPNSDVALFYKAMC 398 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 Y ++ D +++VE NS Y A Y Sbjct: 399 YLKLSDDNN--------ATLVFNQLVENCPNSVYYTVACDYADE 434 >gi|319789142|ref|YP_004150775.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovibrio ammonificans HB-1] gi|317113644|gb|ADU96134.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovibrio ammonificans HB-1] Length = 583 Score = 42.0 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 56/151 (37%), Gaps = 22/151 (14%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++V ++ RE+ A+L+L E +A N+ P+ LL Sbjct: 244 KEVLKKEPDNIYALREL---ALLYLAEGKTKEAVNALNRLVSLSPY----DLRLLSWVAA 296 Query: 104 Q-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + +Y+Q + E+ P + N VY+++G++Y K L+ Sbjct: 297 NLFQLKEYRQVIPVIEKIAKLNPGNPN---VYFMLGLAYEMS--------GNLKKALEAY 345 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 +++ + +P + + +L E Sbjct: 346 KKVLSFHIENP---TVLERLAIVNYKLGNYE 373 >gi|312385821|gb|EFR30226.1| hypothetical protein AND_00290 [Anopheles darlingi] Length = 1122 Score = 42.0 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 49/141 (34%), Gaps = 24/141 (17%) Query: 133 VYYLVGMSYA--QMIRDVPYDQRATKL----MLQYMSRIVERYTNSPYVKGA-------R 179 Y L+ + Q + D+ K L +++ + + + Sbjct: 640 AYSLIALGNFWLQSLHQPNRDKEKEKKHQEKALAIYKQVLRNDPKNIWAANGIGAVLAHK 699 Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 + R+ A +E + I Y+++ +Y++AI ++ L + + E Sbjct: 700 GCIIEARDIFAQVREATAEFCDVWINIAHIYVEQKQYISAIQMYENCLKKFYRHNNV-EV 758 Query: 230 MARLVEAYVALALMDEAREVV 250 M L AY + EA+ + Sbjct: 759 MQYLARAYFRAGKLKEAKMTL 779 >gi|148977415|ref|ZP_01814015.1| hypothetical protein VSWAT3_22847 [Vibrionales bacterium SWAT-3] gi|145963367|gb|EDK28632.1| hypothetical protein VSWAT3_22847 [Vibrionales bacterium SWAT-3] Length = 261 Score = 42.0 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 47/127 (37%), Gaps = 15/127 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ QR + + + + +S + + +++ G+ Y Sbjct: 148 YQNAVDMILKQRDYTGAIAAFQKFQKDFPDSTFTPNSHYWL--------------GQLYF 193 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A+ F V+ +Y D+ +A+ +L + +A++ + YP Sbjct: 194 AKKQDKEAVKSFAAVV-SYKDSNKRADALVKLGDIAARNNNAPQAKKYYQQVVTEYPNSA 252 Query: 262 WARYVET 268 A+ +T Sbjct: 253 SAKVAQT 259 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 55/150 (36%), Gaps = 23/150 (15%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + S++ TDV ++ Y+ AV LK+++++ A F + +DFP + S Sbjct: 128 SEGSKEASGTFSTDVD-EQTAYQNAVDMILKQRDYTGAIAAFQKFQKDFPDSTFTPNSHY 186 Query: 99 MSAFVQY-SAGKYQ-----QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + + + A ++ +K D + + D+ Sbjct: 187 WLGQLYFAKKQDKEAVKSFAAVVSYKD------SNKRAD------ALV---KLGDIAARN 231 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYV 182 +Y ++V Y NS K A+ ++ Sbjct: 232 NNAPQAKKYYQQVVTEYPNSASAKVAQTHL 261 >gi|332141966|ref|YP_004427704.1| ATP-dependent protease La [Alteromonas macleodii str. 'Deep ecotype'] gi|327551988|gb|AEA98706.1| ATP-dependent protease La [Alteromonas macleodii str. 'Deep ecotype'] Length = 397 Score = 42.0 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 41/111 (36%), Gaps = 3/111 (2%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + +L + AV + G S D+Y + + + +L+ N+++A + Sbjct: 6 RTSLRVSLLSAVIMVTGCVSNSQSDLYGGNFDHEEAAKTRTSLGLTYLQNNNYTQAKKNL 65 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 ++ F + A+ G ++A + I PE+ ++ Sbjct: 66 DKALA---FDPRSADVQFAMAYYYQLVGDNRRAEEFYKSAIDLAPENGDIA 113 >gi|323495046|ref|ZP_08100135.1| tetratricopeptide repeat protein [Vibrio brasiliensis LMG 20546] gi|323310703|gb|EGA63878.1| tetratricopeptide repeat protein [Vibrio brasiliensis LMG 20546] Length = 389 Score = 42.0 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 58/192 (30%), Gaps = 48/192 (25%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A ++ +A + F Q + P A L++ + ++ +A + Sbjct: 114 AKDYMASGFLDRAEKIFEQLVDE-PDHREAALQQLVAIY--QQTREWSKAIN-------- 162 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPY------DQRATK----LMLQYMSRIVERYTNSP 173 Y LV M +M + + Q + +Q R + Sbjct: 163 --------YASLLVKMGRKRMRTSIGHFWCELAMQEKAEGNHAQAMQNFKRALAEDPKCV 214 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 A G+ YL +Y + I ++VL D++ E + L Sbjct: 215 RASIAL-----------------GKLYLDNEDYRSTIKYMEMVLD--QDSDFVSEVLPTL 255 Query: 234 VEAYVALALMDE 245 E Y L DE Sbjct: 256 AECYHHLGQEDE 267 >gi|302346568|ref|YP_003814866.1| tetratricopeptide repeat protein [Prevotella melaninogenica ATCC 25845] gi|302150895|gb|ADK97156.1| tetratricopeptide repeat protein [Prevotella melaninogenica ATCC 25845] Length = 827 Score = 42.0 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 39/132 (29%), Gaps = 18/132 (13%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 M L A+ + K + + + FL+ S + + DV ++ Sbjct: 552 MKRTLDAAMKAIADMEETVKKLKPSSKKTFSFFFLIICMSIFSLQLSAQTKADV---DKL 608 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGE 118 Y ++ N+ +A + + + + + L Y A E Sbjct: 609 Y-------QKGNYMQAVKGYEKLLKQ------GESAALYYNLGNSYYRLDNIPHAVLSYE 655 Query: 119 EYITQYPESKNV 130 P +++ Sbjct: 656 RAQRLAPSDEDI 667 >gi|237731704|ref|ZP_04562185.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226907243|gb|EEH93161.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 389 Score = 42.0 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 69/189 (36%), Gaps = 30/189 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ + +A + FNQ + + F A + L+ + + ++Q+A + E + Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRVGALQ-QLLQIY--QATSEWQKAIDVAERLVKL 170 Query: 124 YPESKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + + ++ ++ ++ QM D+ K NS Sbjct: 171 GKDKQRIEIAHFYCELALQQMGSDDMDRAMTLLKKGAAADK-------NS---------- 213 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 A + +GR Y+ +G+Y A+ Q V++ D E E + L Y L Sbjct: 214 -------ARVSIMMGRVYMVKGDYAKAVESLQRVIS--QDKELVSETLEMLQSCYQHLGK 264 Query: 243 MDEAREVVS 251 DE E + Sbjct: 265 NDEWAEFLR 273 >gi|188528063|ref|YP_001910750.1| paralysed flagella protein [Helicobacter pylori Shi470] gi|188144303|gb|ACD48720.1| paralysed flagella protein [Helicobacter pylori Shi470] Length = 803 Score = 42.0 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 12/99 (12%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L + + + TD +Y Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEVIALGQLGIKKSLLIDIGAKWIKNYPTDPSIPEVLYY 276 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 277 VAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLA 315 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 188 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEVIALGQLG 247 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP ++ V Y V + + K ++Y RI+ Sbjct: 248 IKKSLLIDIGAKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 299 Query: 168 RYTNSPYVKGARFYVTV 184 Y NS Y A+ + + Sbjct: 300 EYKNSRYAPLAQMRLAI 316 >gi|317502937|ref|ZP_07961030.1| conserved hypothetical protein [Prevotella salivae DSM 15606] gi|315665947|gb|EFV05521.1| conserved hypothetical protein [Prevotella salivae DSM 15606] Length = 226 Score = 42.0 bits (98), Expect = 0.087, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 8/71 (11%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEE 119 + A KE+ + +A + + R R + L Y G Y +A E Sbjct: 2 DNANKAYKEKRYQQAIKDYELLLRT------QRTASLYYNLGNAYYRTGNYTKAILNYER 55 Query: 120 YITQYPESKNV 130 P +++ Sbjct: 56 AAKINPSDRDI 66 >gi|326434689|gb|EGD80259.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818] Length = 601 Score = 42.0 bits (98), Expect = 0.088, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 62/190 (32%), Gaps = 32/190 (16%) Query: 61 YEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 Y + + + +F +A E + + P YS G Y Sbjct: 357 YNNLGIAYRNKGDFDRAIEQYEKALAIKGETLGEKHPSTASTFN---NLGSAYYSKGDYD 413 Query: 112 QAASLGEEYITQY-----PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM-SRI 165 +A + E+ + Y + + Y +G +Y + + L + Sbjct: 414 RAIAFYEKALAIYVETLGEKHPSTAMTYNNLGSAYNNK-GEYDKAIAFYEKALAAFVETL 472 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR--GEYVAAIPRFQLVLANYSDA 223 E++ ++ + F + + ++ KE Y++R Y + V ++ D Sbjct: 473 GEKHPST---AMSYFNIGLLHDKRGDKEQACA--YMQRALDGYTS------TVGPDHPDT 521 Query: 224 EHAEEAMARL 233 AE + R+ Sbjct: 522 RDAERELRRI 531 >gi|302843696|ref|XP_002953389.1| hypothetical protein VOLCADRAFT_118323 [Volvox carteri f. nagariensis] gi|300261148|gb|EFJ45362.1| hypothetical protein VOLCADRAFT_118323 [Volvox carteri f. nagariensis] Length = 240 Score = 42.0 bits (98), Expect = 0.088, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 45/144 (31%), Gaps = 20/144 (13%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGK 109 T + YE V+ +++ F++A + + + + + + + F ++ K Sbjct: 111 TGEATCEDYYELGVILTRKKLFTQATKNLEKAKKVW-DGEESELAQVHNALGFCYFNMDK 169 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + P YV + + D + + L + Sbjct: 170 TEMAIQEYRRAVELQPG-----YV------TAWNNLGDALEKKGKWRDALVAYQEALTYA 218 Query: 170 TNSPYVKGARFYVTVGRN---QLA 190 ++ AR + +LA Sbjct: 219 PDNR---IARQRSDYCKEKVTRLA 239 >gi|193084045|gb|ACF09718.1| TPR-repeat protein [uncultured marine crenarchaeote KM3-86-C1] Length = 272 Score = 42.0 bits (98), Expect = 0.088, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 54/146 (36%), Gaps = 18/146 (12%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + + + +Y +A+ F++++ A +F + + P +L KY Sbjct: 5 ASKEKTEDLLY-QAMSFMEKREPKSAISFFKKIIKQDP---KNIDALYNQGIALNQLRKY 60 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 Q A + ++ + P+ G++ A++ T L+Y ++ +E Sbjct: 61 QDAITCFDKVLEINPKHIA---AINNRGIALAEL--------GNTDDALEYYNKAIEIDP 109 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEI 196 Y A + V ++L E I Sbjct: 110 --KYAA-AHYNKGVLYDKLLQHEEAI 132 >gi|114677995|ref|XP_001167760.1| PREDICTED: protein phosphatase 5, catalytic subunit isoform 3 [Pan troglodytes] Length = 482 Score = 42.0 bits (98), Expect = 0.088, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102 + ++ E+ +A + K +++ A ++++Q P +S A+ Sbjct: 18 EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 74 Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y+ G +A L ++YI YY S + + L Sbjct: 75 TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 116 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + +V+ + A+ + K E Sbjct: 117 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149 >gi|260170235|ref|ZP_05756647.1| hypothetical protein BacD2_00045 [Bacteroides sp. D2] gi|315918598|ref|ZP_07914838.1| BatE [Bacteroides sp. D2] gi|313692473|gb|EFS29308.1| BatE [Bacteroides sp. D2] Length = 277 Score = 42.0 bits (98), Expect = 0.089, Method: Composition-based stats. Identities = 13/122 (10%), Positives = 37/122 (30%), Gaps = 15/122 (12%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----------KAVLFL 68 + K I S+++ G + S + V + + + Sbjct: 1 MKKILFFILLSMSL-TCFGQDSLSIDTRQTNGVDSIHASHTTFSSNTLEDATKAEGDSAY 59 Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 +++++ A + + ++ A Y G+ +A E + P + Sbjct: 60 IKEDYAAAIQIYEALLKN---GE-AADVYYNLGNSYYKIGEIAKAVLNYERALLLQPGNG 115 Query: 129 NV 130 ++ Sbjct: 116 DI 117 >gi|170076790|ref|YP_001733428.1| soluble lytic transglycosylase [Synechococcus sp. PCC 7002] gi|169884459|gb|ACA98172.1| soluble lytic transglycosylase [Synechococcus sp. PCC 7002] Length = 717 Score = 42.0 bits (98), Expect = 0.089, Method: Composition-based stats. Identities = 32/233 (13%), Positives = 67/233 (28%), Gaps = 45/233 (19%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D+ R Y + +L ++ + A F +D+P + L+ +Q Sbjct: 79 DLDRNRARYLLGMDYLVAEDGAAALAAFENLEQDYP--VLTPHILIKRGRAYELVNNPEQ 136 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM------SRIV 166 A + + + YPE + R YD + + ++ Sbjct: 137 AQVIWFDVVQNYPEDAAAAEALF----------RLSAYDPKYADQAIAEYPAHPRTQSLI 186 Query: 167 ERY----TNSPYVKGARFY-------VTVGRNQLAAK-------EV--EIGRYYLKRGEY 206 ++ + R + R L E+ I + + +Y Sbjct: 187 QQRLAENPQQRDLLELRLKYDADAPDIAQVRQSLMENFADQLSPEIWQAIADSFWDQWQY 246 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 A Y +A + + RL + D+AR + + +P Sbjct: 247 ADAA-------QAYPNAPRTPQNLYRLARSLQVSDQPDQARPAYQTLIQTFPD 292 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 69/213 (32%), Gaps = 40/213 (18%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 ++ A + +P A ++L A + + QA + I +P++ Sbjct: 245 QYADAAQA-------YPNAPRTPQNLYRLARSLQVSDQPDQARPAYQTLIQTFPDAPETG 297 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN---SPYVKGARFYVTVGRNQ 188 +G+ + + + D L Y+ + +++ S A +G N+ Sbjct: 298 -----LGL---RRLASLVND----TEALTYLDQAAQKFPEEAPSALFAKADLLEKLGSNR 345 Query: 189 LA------------------AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 A + Y + G Y AI + + D A E++ Sbjct: 346 SASQTREQALNTHKDQSATTEYRWQQAERYAQEGNYTQAIEWAKAIATLTPDHTLAAESI 405 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + + L A++ + YP+ Y+A Sbjct: 406 FWTGKWHQQLGETQAAKQAFQQTLKDYPESYYA 438 >gi|160882766|ref|ZP_02063769.1| hypothetical protein BACOVA_00727 [Bacteroides ovatus ATCC 8483] gi|237720672|ref|ZP_04551153.1| BatE [Bacteroides sp. 2_2_4] gi|156111790|gb|EDO13535.1| hypothetical protein BACOVA_00727 [Bacteroides ovatus ATCC 8483] gi|229449507|gb|EEO55298.1| BatE [Bacteroides sp. 2_2_4] Length = 277 Score = 42.0 bits (98), Expect = 0.089, Method: Composition-based stats. Identities = 13/122 (10%), Positives = 37/122 (30%), Gaps = 15/122 (12%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----------KAVLFL 68 + K I S+++ G + S + V + + + Sbjct: 1 MKKILFFILLSMSL-TCFGQDSLSIDTRQTNGVDSIHASHTTFSSNTLEDATKAEGDSAY 59 Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 +++++ A + + ++ A Y G+ +A E + P + Sbjct: 60 IKEDYAAAIQIYEALLKN---GE-AADVYYNLGNSYYKIGEIAKAVLNYERALLLQPGNG 115 Query: 129 NV 130 ++ Sbjct: 116 DI 117 >gi|118384080|ref|XP_001025193.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89306960|gb|EAS04948.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 658 Score = 42.0 bits (98), Expect = 0.089, Method: Composition-based stats. Identities = 25/205 (12%), Positives = 64/205 (31%), Gaps = 36/205 (17%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +Y + +A + F + F + +L + + ++ + + Sbjct: 50 LYSLGLSQQNIYLIDEAIQSFKKCLE----FNPKHQNALNQLGYAYHQKKMINESIACYK 105 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + I +P YY +G++ +D + + ++ ++ N A Sbjct: 106 KNIELHPNDHLS---YYNLGLAL--------HDSGKFQEAISSYNKAIQLKPNYEMCYEA 154 Query: 179 ----RFYVTVGRNQLAAKE--VEI-----------GRYYLKRGEYVAAIPRFQLVLANYS 221 + + + + + + +E+ Y K G+ AI F+ + Sbjct: 155 LGNLQQDMGLIQEAIFSYNKILEVNPKYENGYNCLANIYYKIGKVDEAISIFKQCIEVNP 214 Query: 222 DAEHAEEAMARLVEAYVALALMDEA 246 E+ L Y + +EA Sbjct: 215 KHENTY---INLGLTYKRKGMSEEA 236 Score = 38.9 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 34/159 (21%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQMIRDVPYDQRATKLM 158 A + Y GK +A S+ ++ I P+ +N Y+ +G++Y + ++ Sbjct: 189 LANIYYKIGKVDEAISIFKQCIEVNPKHENT----YINLGLTYKRK--------GMSEEA 236 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 L R +E NS RN++A IG Y+ +G AI F L Sbjct: 237 LILFKRCLEI--NS-------------RNEVAHY--NIGLEYIHQGRVDEAILVF---LK 276 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256 + EE + L AY +M++A +Q Sbjct: 277 SLDLNPSYEECLNSLASAYEEKGMMEDAIETYQKCLQLN 315 >gi|145552591|ref|XP_001461971.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124429808|emb|CAK94598.1| unnamed protein product [Paramecium tetraurelia] Length = 1010 Score = 42.0 bits (98), Expect = 0.090, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 66/203 (32%), Gaps = 17/203 (8%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 Y +Y K V + A FN+ + P + + + + K+ +A Sbjct: 461 DYADGLYNKGVALCNLNQYEDAIRQFNKAIQLKPKNEC-KFAFINRGICLKNLKKFNEAI 519 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQ----RATKLMLQYMSRIV 166 +E I + +V+ +YY G ++ + YDQ + + Sbjct: 520 QNYDEAIQL-SQGTDVEDIYYFKGNCLLELNKYEDAIQLYDQAIQLESVYSSSANFQEGI 578 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKE---VEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 YTN + A Q + +G Y Y A+ +F ++ Sbjct: 579 -AYTNLKHFDDAIQSYQHAIEQNSQNSWAYFNLGITYYNLENYEQALIQFT---RSFDIQ 634 Query: 224 EHAEEAMARLVEAYVALALMDEA 246 ++A+ AY+ L EA Sbjct: 635 PTFKDAVFNEAAAYIKLKRYAEA 657 >gi|189426649|ref|YP_001953826.1| hypothetical protein Glov_3605 [Geobacter lovleyi SZ] gi|189422908|gb|ACD97306.1| Tetratricopeptide TPR_2 repeat protein [Geobacter lovleyi SZ] Length = 248 Score = 42.0 bits (98), Expect = 0.090, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 14/141 (9%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 D + R+ + + +L + ++S A E P + + V + Sbjct: 122 AVKDDLFYPRHDHALINLGLAYLGKGDYSAALEELYTARSADPRNPI---VKVAIGRVLF 178 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + GK QQAA I + + ++ +G++ + Q + Sbjct: 179 AQGKTQQAADEYRRAIEI---APDYAQAHFQLGLALMK--------QSQLAAARAAFKEV 227 Query: 166 VERYTNSPYVKGARFYVTVGR 186 V +S A Y+ + R Sbjct: 228 VRIAPDSEIGHTAIGYIDLLR 248 >gi|332838298|ref|XP_508927.3| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4 [Pan troglodytes] Length = 459 Score = 42.0 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 46/146 (31%), Gaps = 30/146 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109 E+ ++ KE + +A + + + A+K+ L A Sbjct: 275 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQA 334 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + +L ++++ Y Sbjct: 335 FSAAIESCNKALELDSNNEKG---LFRRGEAHLAVND--------FELARADFQKVLQLY 383 Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191 N+ A+ + V R QLA Sbjct: 384 PNNK---AAKTQLAVCQQRIRRQLAR 406 >gi|313674274|ref|YP_004052270.1| hypothetical protein [Marivirga tractuosa DSM 4126] gi|312940972|gb|ADR20162.1| Tetratricopeptide TPR_1 repeat-containing protein [Marivirga tractuosa DSM 4126] Length = 1080 Score = 42.0 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 53/146 (36%), Gaps = 24/146 (16%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---S 84 I++ FLV + + +S T + +E+ +A E + +A + + Sbjct: 4 LLISILFLVNFALSA-----QNSPTPLINSQELLTEANTLSNEGKYEEAIPLYLKISESD 58 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 ++ K L F ++++A ++GEEY + + Y + + Sbjct: 59 TNY------VKMLSELIFAYNKTDQFEKAITIGEEY--KNSTNP------YR--LVFYNQ 102 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYT 170 + + ++ + +E+Y Sbjct: 103 LGTAYLGLGKKEKAIKEIETALEKYP 128 >gi|193083980|gb|ACF09655.1| TPR-repeat protein [uncultured marine crenarchaeote AD1000-56-E4] Length = 272 Score = 42.0 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 28/191 (14%), Positives = 65/191 (34%), Gaps = 38/191 (19%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + + + +Y +A+ F++++ A +F + + P +L KY Sbjct: 5 TSKEKTEDLLY-QAMSFMEKREPKSAISFFKKIIKQDP---KNIDALYNQGIALNQLRKY 60 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 Q A + ++ + P+ G++ A++ T L+Y ++ +E Sbjct: 61 QDAITCFDKVLEINPKHIA---AINNKGIALAEL--------GNTDDALEYYNKAIEIDP 109 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGR---------------YYL-----KRGEYVAAI 210 Y A + V ++L E I +Y K ++ A+ Sbjct: 110 --KYAA-AHYNKGVLYDKLLQHEEAIQNLDEAIKCDSVNVNTAFYRGVVLGKMKKHEEAL 166 Query: 211 PRFQLVLANYS 221 F+ + + Sbjct: 167 NCFENIYRKHP 177 >gi|405833|gb|AAA60471.1| CDC27 [Homo sapiens] Length = 823 Score = 42.0 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 48/190 (25%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 585 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 634 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 635 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 690 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L + +Y +A+ + + + + Sbjct: 691 LNKAIVIDPKNPLCK--FHRASVLFRNEKYKSALQELEELKQIVPKESLVY---FLIGKV 745 Query: 237 YVALALMDEA 246 Y L A Sbjct: 746 YKKLGQTHLA 755 >gi|299145613|ref|ZP_07038681.1| aerotolerance-related exported protein [Bacteroides sp. 3_1_23] gi|298516104|gb|EFI39985.1| aerotolerance-related exported protein [Bacteroides sp. 3_1_23] Length = 277 Score = 42.0 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 13/122 (10%), Positives = 37/122 (30%), Gaps = 15/122 (12%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----------KAVLFL 68 + K I S+++ G + S + V + + + Sbjct: 1 MKKILFFILLSMSL-TCFGQDSLSIDTRQTNGVDSIHASHTTFSSNTLEDATKAEGDSAY 59 Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 +++++ A + + ++ A Y G+ +A E + P + Sbjct: 60 IKEDYAAAIQIYEALLKN---GE-AADVYYNLGNSYYKIGEIAKAVLNYERALLLQPGNG 115 Query: 129 NV 130 ++ Sbjct: 116 DI 117 >gi|294788232|ref|ZP_06753475.1| putative periplasmic protein [Simonsiella muelleri ATCC 29453] gi|294483663|gb|EFG31347.1| putative periplasmic protein [Simonsiella muelleri ATCC 29453] Length = 255 Score = 42.0 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 47/159 (29%), Gaps = 21/159 (13%) Query: 39 ERQSSRDVYLDSVTDVRYQREV---------YEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 Q + + +V ++ YE A +++N+ + Sbjct: 108 GTQPEKTLLAPDAPEVPTLAQIAPVTIKNDAYELAQKQFRQKNYQQVINMLRNADAGGDG 167 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + +ARK + + Q ++G+ ++ S ++VG Sbjct: 168 SIMARKQMYLLLLSHQKLNNCQSVINIGQRLAGRFSGSHEAAEAQFMVGQC--------Q 219 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 +D + + R++ NS A NQ Sbjct: 220 WDIQQRDIAKDTWRRLIASQPNS----SAAQRAKFAINQ 254 >gi|256087899|ref|XP_002580099.1| protein phosphatase-5 [Schistosoma mansoni] gi|238665607|emb|CAZ36338.1| protein phosphatase-5, putative [Schistosoma mansoni] Length = 487 Score = 42.0 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 47/149 (31%), Gaps = 28/149 (18%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAG 108 T + E+A F K+ ++ KA + + + + +A +SL Sbjct: 5 TISDEAEALKEEANKFFKDGDYEKAIDAYTKAIEIRETAVY--LANRSL-----AYLRTE 57 Query: 109 KYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 + A + I+ + YV YY ++ + K L ++ Sbjct: 58 CFGYALDDASKAISL-----DSSYVKGYYRRASAHMAL--------GQYKEALADYETVI 104 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + AR +T R + K E Sbjct: 105 RVAPSDK---MAREKLTECRKIIRRKAFE 130 >gi|268679163|ref|YP_003303594.1| hypothetical protein Sdel_0522 [Sulfurospirillum deleyianum DSM 6946] gi|268617194|gb|ACZ11559.1| Tetratricopeptide TPR_2 repeat protein [Sulfurospirillum deleyianum DSM 6946] Length = 306 Score = 42.0 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 27/67 (40%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + Y +AI ++ ++ + A + + ++ L EA+ ++ YP Sbjct: 240 YSKKSYASAIEYYKTSISLFDKAAYIPTLLYHTGTSFEKLGKAKEAQGFYKALKANYPTS 299 Query: 261 YWARYVE 267 A+ V+ Sbjct: 300 PEAKKVK 306 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 47/140 (33%), Gaps = 11/140 (7%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 ++S+ V + + ++A F + ++++ A + + K Sbjct: 178 KESTPSVTSKQDLSSKDSASLMKEADTFFENKSYTNAEPLYKELLNR---NYKPAKVNFN 234 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + YS Y A + I+ + ++ + + Y G S+ ++ K Sbjct: 235 LGEIAYSKKSYASAIEYYKTSISLFDKAAYIPTLLYHTGTSFEKL--------GKAKEAQ 286 Query: 160 QYMSRIVERYTNSPYVKGAR 179 + + Y SP K + Sbjct: 287 GFYKALKANYPTSPEAKKVK 306 >gi|223937977|ref|ZP_03629876.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514] gi|223893378|gb|EEF59840.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514] Length = 157 Score = 42.0 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 7/60 (11%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAAS 115 +E Y+ A+ ++ A F + P F + L Y Y +A Sbjct: 5 QERYDDAMYDFSMADYDGAIAKFQAILAEDPNFF-----DAQLSLGMAYYRKEDYAKAIE 59 >gi|145601929|ref|XP_359458.2| hypothetical protein MGG_05319 [Magnaporthe oryzae 70-15] gi|145010394|gb|EDJ95050.1| hypothetical protein MGG_05319 [Magnaporthe oryzae 70-15] Length = 681 Score = 42.0 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 58/191 (30%), Gaps = 23/191 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV-ARKSLLMSAFVQYSAGKYQQAASLGEE- 119 E A LK + S + ++ P+ + RK LM + + Sbjct: 307 EAAQSALKSGHASFVLRALDLAEKNLPYGALRPRKWQLMRGEALLKMAD-INSIGDAQNI 365 Query: 120 ---YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + + L G S Q +Q+ + V + Sbjct: 366 AMSLLRINNQDPE---ALGLRGRSLYA--------QGENDKAIQHFRKAVSLDPDFK--- 411 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA-EEAMARLVE 235 A ++ V + KE Y K G++ AAI ++ L D + + + Sbjct: 412 DAVKWLRVVQKLDRMKEEGNVEY--KAGKWQAAIEKYSAALQVDPDNKGTNSKILQNRAL 469 Query: 236 AYVALALMDEA 246 AY L D+A Sbjct: 470 AYNKLKQYDQA 480 >gi|114677993|ref|XP_001167704.1| PREDICTED: serine/threonine-protein phosphatase 5 isoform 1 [Pan troglodytes] Length = 477 Score = 42.0 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102 + ++ E+ +A + K +++ A ++++Q P +S A+ Sbjct: 18 EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 74 Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y+ G +A L ++YI YY S + + L Sbjct: 75 TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 116 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + +V+ + A+ + K E Sbjct: 117 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149 >gi|120554730|ref|YP_959081.1| TPR repeat-containing protein [Marinobacter aquaeolei VT8] gi|120324579|gb|ABM18894.1| Tetratricopeptide TPR_2 repeat protein [Marinobacter aquaeolei VT8] Length = 189 Score = 42.0 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 59/186 (31%), Gaps = 28/186 (15%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREV----YEKAVLFLKEQNFSKAYEYFNQCSRD 86 +C L+ +D + ++ V + +AV +K+ NF++A F Q +R+ Sbjct: 8 GLCLLLSVALSGCVTAPTPPESDPQAEQAVLEVSFSEAVKAMKQGNFTEARTVFEQLARN 67 Query: 87 FPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 +P +A + + G A E PE + +++ + Sbjct: 68 YPDKAGPMA-----NLGIIAFREGDADGAKEWFERARAVNPEH--------VQALNHLGV 114 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 I + +Y + + Y A + + + Y + Sbjct: 115 I---ARNAGEFDEAERYYRAALAADPD--YAP-AILNLAFLLDIYLGNPADAIELYER-- 166 Query: 205 EYVAAI 210 Y +A Sbjct: 167 -YQSAA 171 >gi|61355277|gb|AAX41123.1| FK506 binding protein 4 59kDa [synthetic construct] Length = 459 Score = 42.0 bits (98), Expect = 0.092, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 46/146 (31%), Gaps = 30/146 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109 E+ ++ KE + +A + + + A+K+ L A Sbjct: 275 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQA 334 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + +L ++++ Y Sbjct: 335 FSAAIESCNKALELDSNNEKG---LFRRGEAHLAVND--------FELARADFQKVLQLY 383 Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191 N+ A+ + V R QLA Sbjct: 384 PNNK---AAKTQLAVCQQRIRRQLAR 406 >gi|60653315|gb|AAX29352.1| FK506 binding protein 4 [synthetic construct] gi|60825929|gb|AAX36740.1| FK506 binding protein 4 [synthetic construct] Length = 460 Score = 42.0 bits (98), Expect = 0.092, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 46/146 (31%), Gaps = 30/146 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109 E+ ++ KE + +A + + + A+K+ L A Sbjct: 275 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQA 334 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + +L ++++ Y Sbjct: 335 FSAAIESCNKALELDSNNEKG---LFRRGEAHLAVND--------FELARADFQKVLQLY 383 Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191 N+ A+ + V R QLA Sbjct: 384 PNNK---AAKTQLAVCQQRIRRQLAR 406 >gi|54298845|ref|YP_125214.1| hypothetical protein lpp2912 [Legionella pneumophila str. Paris] gi|53752630|emb|CAH14065.1| hypothetical protein lpp2912 [Legionella pneumophila str. Paris] Length = 293 Score = 42.0 bits (98), Expect = 0.092, Method: Composition-based stats. Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 8/70 (11%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A + ++ +A + FN+ + GKY++A ++ + Sbjct: 56 AASAAYRAGDYEQAAKLFNELK--------TEQGYYNQGNALAHLGKYEEAIRAYDKALA 107 Query: 123 QYPESKNVDY 132 P +++ Y Sbjct: 108 FNPNNQDALY 117 >gi|4503729|ref|NP_002005.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Homo sapiens] gi|399866|sp|Q02790|FKBP4_HUMAN RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP4; Short=PPIase FKBP4; AltName: Full=51 kDa FK506-binding protein; Short=FKBP51; AltName: Full=52 kDa FK506-binding protein; Short=52 kDa FKBP; Short=FKBP-52; AltName: Full=59 kDa immunophilin; Short=p59; AltName: Full=FK506-binding protein 4; Short=FKBP-4; AltName: Full=FKBP59; AltName: Full=HSP-binding immunophilin; Short=HBI; AltName: Full=Immunophilin FKBP52; AltName: Full=Rotamase; Contains: RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed gi|186390|gb|AAA36111.1| immunophilin [Homo sapiens] gi|12804711|gb|AAH01786.1| FK506 binding protein 4, 59kDa [Homo sapiens] gi|14043983|gb|AAH07924.1| FK506 binding protein 4, 59kDa [Homo sapiens] gi|60656373|gb|AAX32750.1| FK506 binding protein 4 [synthetic construct] gi|60814184|gb|AAX36290.1| FK506 binding protein 4 [synthetic construct] gi|119609295|gb|EAW88889.1| FK506 binding protein 4, 59kDa, isoform CRA_a [Homo sapiens] gi|119609296|gb|EAW88890.1| FK506 binding protein 4, 59kDa, isoform CRA_a [Homo sapiens] gi|123993985|gb|ABM84594.1| FK506 binding protein 4, 59kDa [synthetic construct] gi|123998249|gb|ABM86726.1| FK506 binding protein 4, 59kDa [synthetic construct] gi|168277778|dbj|BAG10867.1| FK506 binding protein 4 [synthetic construct] Length = 459 Score = 42.0 bits (98), Expect = 0.092, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 46/146 (31%), Gaps = 30/146 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109 E+ ++ KE + +A + + + A+K+ L A Sbjct: 275 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQA 334 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + +L ++++ Y Sbjct: 335 FSAAIESCNKALELDSNNEKG---LFRRGEAHLAVND--------FELARADFQKVLQLY 383 Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191 N+ A+ + V R QLA Sbjct: 384 PNNK---AAKTQLAVCQQRIRRQLAR 406 >gi|88812660|ref|ZP_01127907.1| tfp pilus assembly protein PilF [Nitrococcus mobilis Nb-231] gi|88790076|gb|EAR21196.1| tfp pilus assembly protein PilF [Nitrococcus mobilis Nb-231] Length = 257 Score = 42.0 bits (98), Expect = 0.092, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 73/271 (26%), Gaps = 58/271 (21%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAY 77 + ++A + + VC +V ++ S ++ E+ + + +L+ +A Sbjct: 1 MRRYAAVL---LTVCNMVLAAGCATDSKPRPSPEALQKASEINTQIGIRYLQTGELQQAV 57 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV------- 130 + + + + V + QA + I P + + Sbjct: 58 RKLEKALKQDAGNA---DAHMTLGVVYERLDETVQARAHYRRAIELQPNNSSALNNYGQF 114 Query: 131 -------DYV--YYLVGMSY-AQMIRDVPY--------DQRATKLMLQYMSRIVE---RY 169 D +L VP TK + R ++ R+ Sbjct: 115 LCERDEYDRAERLFLRAAENPTYESPQVPLANAGVCAIQDGDTKRAEDFFLRALKYEPRF 174 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 S A+ + R Y +R Y+A + Sbjct: 175 P-SALAHMAQLRFD-------GRHFLSARGYYQR--YLAVA-------------RQSPST 211 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 + + AL D L++ ++P Sbjct: 212 LWLGIRLEHALGDKDAVASYKLLLKGKFPDS 242 >gi|189468200|ref|ZP_03016985.1| hypothetical protein BACINT_04596 [Bacteroides intestinalis DSM 17393] gi|189436464|gb|EDV05449.1| hypothetical protein BACINT_04596 [Bacteroides intestinalis DSM 17393] Length = 995 Score = 42.0 bits (98), Expect = 0.093, Method: Composition-based stats. Identities = 25/184 (13%), Positives = 61/184 (33%), Gaps = 34/184 (18%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLV-----GMSYAQMIRDVPYDQRATKLMLQ 160 +++A + E + ++P+ D YY + ++Y + + + Sbjct: 616 RMQDFKRAEAAFERLVREFPDFAQADEAYYQLFLTELALNYYGELPALQR-------AEK 668 Query: 161 YMSRIVERYTNSPYVKGA------------RFYVTVGRNQLAAKEVEIGRYYLKRGE-YV 207 Y + ++ R+ S Y K + + A K ++G R ++ Sbjct: 669 YKAELIARFPKSRYAKTLADPDFAENAVYGKQREDSLYAR-AYKHFQLGDTTTVRAAEHL 727 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 +A Y +H + M + D+ ++ + ++YPQ Sbjct: 728 SA--------EIYPLGQHRPKFMFLNAVTRLQGGETDQFLAILKELVQQYPQNEITDLAA 779 Query: 268 TLVK 271 ++K Sbjct: 780 HILK 783 >gi|148361165|ref|YP_001252372.1| hypothetical protein LPC_3139 [Legionella pneumophila str. Corby] gi|148282938|gb|ABQ57026.1| hypothetical protein LPC_3139 [Legionella pneumophila str. Corby] Length = 322 Score = 42.0 bits (98), Expect = 0.093, Method: Composition-based stats. Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 8/70 (11%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A + ++ +A + FN+ + GKY++A ++ + Sbjct: 55 AASAAYRAGDYEQAAKLFNELK--------TEQGYYNQGNALAHLGKYEEAIRAYDKALA 106 Query: 123 QYPESKNVDY 132 P +++ Y Sbjct: 107 FNPNNQDALY 116 >gi|74003532|ref|XP_535843.2| PREDICTED: similar to leprecan-like 1 isoform 1 [Canis familiaris] Length = 709 Score = 42.0 bits (98), Expect = 0.093, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P+ ++V L + Y + + D D A+ + Sbjct: 315 FAYYRVGEYVKALECAKAYLLLHPDDEDV-----LDNVDYYEGLLDDSSDP-ASIEARED 368 Query: 162 MSRIVERY 169 ++ V+R+ Sbjct: 369 LAMFVKRH 376 >gi|72383170|ref|YP_292525.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A] gi|72003020|gb|AAZ58822.1| TPR repeat [Prochlorococcus marinus str. NATL2A] Length = 288 Score = 42.0 bits (98), Expect = 0.093, Method: Composition-based stats. Identities = 14/130 (10%), Positives = 39/130 (30%), Gaps = 10/130 (7%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 +++K+ L + R + R++ + A+ ++ + + Sbjct: 4 TSKIFKYFLGLSLIKTFFVPNSSIAFFPRINEPNQQEFESTSRQIGKTAIQLIQFGQYKE 63 Query: 76 AYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A + + P A Q+ A ++ + P++ ++ Sbjct: 64 AIKILKLALKLNPTEETLWTT-----LADAQFKLKDSNNALLSLDKVLAINPKNASI--- 115 Query: 134 YYLVGMSYAQ 143 Y+ G Y Sbjct: 116 YFAKGSIYMN 125 >gi|87308944|ref|ZP_01091082.1| hypothetical protein DSM3645_19343 [Blastopirellula marina DSM 3645] gi|87288287|gb|EAQ80183.1| hypothetical protein DSM3645_19343 [Blastopirellula marina DSM 3645] Length = 857 Score = 42.0 bits (98), Expect = 0.093, Method: Composition-based stats. Identities = 22/188 (11%), Positives = 60/188 (31%), Gaps = 17/188 (9%) Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTD------VRYQREVYEKA 64 + Q+ + L +A +G Q + +D D + + A Sbjct: 343 LAGTSPQQMRQLGLVGIVGLAKLGRIGAAIQLLDEHQIDVSGDPGFYLLWLEGQRQFAAA 402 Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS--LLMSAFVQYSAGKYQQAASLGEEYI- 121 +E+++ +A + + P + + + Y ++ +A+ + I Sbjct: 403 EKSKEERDYKEAKVLLIKAVANPPTGDAGALAECQYVLGWCCYRLKQFAEASGAFRQAIA 462 Query: 122 --TQ-YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 P+ K V+ + +++ + D R + + + + + Y K A Sbjct: 463 GLKLSNPQ-KGVESAW----LAFVSLQSLAKTDPRYAAAAIDVLEDLKRDFPDHSYAKKA 517 Query: 179 RFYVTVGR 186 + + Sbjct: 518 DLLIARLQ 525 >gi|254410536|ref|ZP_05024315.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] gi|196182742|gb|EDX77727.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] Length = 1491 Score = 42.0 bits (98), Expect = 0.094, Method: Composition-based stats. Identities = 35/254 (13%), Positives = 70/254 (27%), Gaps = 52/254 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + K + +A F+Q P + + + G+Y++A + ++ Sbjct: 385 NRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGA-----ALFKLGRYEEALANFDQ 439 Query: 120 YITQ----YPESKNVDYVYYLVG-----MSYAQMIRDVPYDQRAT--------------K 156 I+ YP N + +G ++ + + D + Sbjct: 440 VISLQPDYYPAWDNRGAALFKLGRNEEALASFDQVISLQPDDYHAWFKRGVALGELGRNE 499 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG---EYVAAIP-- 211 L +++ + Y V L E + + +Y +A Sbjct: 500 EALASFDQVISLQPD--YYPAWDNRGVVLFE-LGRNEEALANFDQAISLQPDYSSAWNNR 556 Query: 212 --------RFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 R + L N+ A A + A L +EA + P Sbjct: 557 GAALFKLGRHEEALTNFDQAISLQPDDYHAWFKRGVALFKLGRHEEALTNFDQVISLQPD 616 Query: 260 GY--WARYVETLVK 271 Y W + L K Sbjct: 617 DYHAWFKRGVALFK 630 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 70/211 (33%), Gaps = 47/211 (22%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + + + +A F+Q P + + V + G+ ++A + ++ Sbjct: 283 NRGAALGELGRYEEALANFDQAISLQPDDSSAWNNR-----GVVLFKLGRNEEALASFDQ 337 Query: 120 YITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 I+ P+ DY ++ +G++ ++ R+ + L +++ + Y Sbjct: 338 VISLQPD----DYHAWFKLGVALGELGRN--------EEALASFDQVISLQPD--YYPAW 383 Query: 179 RFYVTVGRNQLAAKEVEIG----------RYY----------LKRGEYVAAIPRFQLVL- 217 +L E + YY K G Y A+ F V+ Sbjct: 384 DNRGAALF-KLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRYEEALANFDQVIS 442 Query: 218 ---ANYSDAEHAEEAMARLVEAYVALALMDE 245 Y ++ A+ +L ALA D+ Sbjct: 443 LQPDYYPAWDNRGAALFKLGRNEEALASFDQ 473 Score = 35.1 bits (80), Expect = 9.5, Method: Composition-based stats. Identities = 39/300 (13%), Positives = 84/300 (28%), Gaps = 94/300 (31%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 +A G+ ++S V + + + V + + V + + +A F+Q P Sbjct: 151 LLAGLKGSGYNQES---VPVSNSSTVSGAEFWFNQGVTLYELGRYEEALAKFDQAISLQP 207 Query: 89 --FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP-----------------ESK- 128 + + ++ G++++A + + I+ P K Sbjct: 208 DYYHPWDNRGGVLI-----KLGRHKEALASFDRAISLQPDYYQAWRGRGVVLGMLGRHKE 262 Query: 129 ---NVDYVY----------------------YLVGMSYAQMIRDVPYDQRAT-------- 155 N+D Y ++ + D + Sbjct: 263 ALANLDQAISLQPDFYKTWDNRGAALGELGRYEEALANFDQAISLQPDDSSAWNNRGVVL 322 Query: 156 ------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG----------RY 199 + L +++ + + F + V +L E + Y Sbjct: 323 FKLGRNEEALASFDQVISLQPDDYHAW---FKLGVALGELGRNEEALASFDQVISLQPDY 379 Query: 200 Y----------LKRGEYVAAIPRFQLVL----ANYSDAEHAEEAMARLVEAYVALALMDE 245 Y K G Y A+ F V+ Y ++ A+ +L ALA D+ Sbjct: 380 YPAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRYEEALANFDQ 439 >gi|116753411|ref|YP_842529.1| TPR repeat-containing protein [Methanosaeta thermophila PT] gi|116664862|gb|ABK13889.1| Tetratricopeptide TPR_2 repeat protein [Methanosaeta thermophila PT] Length = 366 Score = 42.0 bits (98), Expect = 0.094, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 6/116 (5%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G ++ + D + + Y K + F + A E F++ R P A K Sbjct: 236 MGIPSKAIDAIDSALTLDPEHAQSWYAKGITFRAMGLYEDALECFDRVLRIDPGNASALK 295 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 S A+ Y+ G+Y +A S E I+ P ++ +Y +G+ + R D Sbjct: 296 SR---AWSLYNLGRYAEALSACEGAISVNPLDED---AWYNMGIVLKALGRYTESD 345 >gi|326436558|gb|EGD82128.1| tetratricopeptide TPR_2 repeat protein [Salpingoeca sp. ATCC 50818] Length = 745 Score = 42.0 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 28/223 (12%), Positives = 68/223 (30%), Gaps = 42/223 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ--------CSRDFPF--AGVARKSLLMSAFVQYSAGKYQ 111 + ++ + +A E++ + P + A GK+ Sbjct: 367 NLGNAYANKREYDRAIEFYEKALAIKVETLGEKHPGTASTYN-----NLAIAYAEKGKHD 421 Query: 112 QAASLGEEYIT-----QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR-I 165 +A + E +T + + Y +G++Y + + L + + Sbjct: 422 EAIACYERALTATVEMLGEKHPSAADTYNNLGVAYRSQ-GEYKRAIGYCEKALAIRAETL 480 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 ER+ ++ + ++ + IG + A R + + Sbjct: 481 GERHPST---ADTYTNLGTVYAEIGEHDKAIGCF------EKALAIRVATLGDKHPSTAD 531 Query: 226 AEEAMARLVEAY-------VALALMDEAREVV-SLIQERYPQG 260 L AY A+A ++A++ +L+ E +P Sbjct: 532 TY---NVLGNAYADKGEYAKAIASHEKAKDAFGALLGETHPNT 571 >gi|221487515|gb|EEE25747.1| hypothetical protein TGGT1_088450 [Toxoplasma gondii GT1] Length = 548 Score = 42.0 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 49/172 (28%), Gaps = 36/172 (20%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVAR-----KSLL-MSAFVQYS 106 V + + F K + F +A E + A+ + LL AF Q + Sbjct: 58 VAEAESLKTEGNEFFKTRLFHQAVEKYTAAIDLICSNTMTAQTKQILQVLLCNRAFCQIN 117 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y A E I P YY G +Y + R K + R++ Sbjct: 118 LENYGSAVVDAERVIQMNPLFAK---AYYRRGCAYCCLSR--------YKKAQKDFERVI 166 Query: 167 ERY--TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + + Q+ + + AAI Q + Sbjct: 167 ALSATPD----PSVVSRLNECKKQI------------RLEAFAAAIETQQTM 202 >gi|86146496|ref|ZP_01064819.1| hypothetical protein MED222_12813 [Vibrio sp. MED222] gi|85835759|gb|EAQ53894.1| hypothetical protein MED222_12813 [Vibrio sp. MED222] Length = 260 Score = 42.0 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 46/127 (36%), Gaps = 15/127 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ QR + + + + +S + +++ G+ Y Sbjct: 147 YQNAVDMILKQRDYTGAIAAFQKFQKDFPDSTFTPNTHYWL--------------GQLYF 192 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A+ F V+ +Y D+ +A+ +L + +A++ + YP Sbjct: 193 AKKQDKEAVKSFAAVV-SYKDSNKRSDALVKLGDIATRNNNATQAKKYYQQVVTEYPNSA 251 Query: 262 WARYVET 268 A+ +T Sbjct: 252 SAKVAKT 258 Score = 38.9 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 56/147 (38%), Gaps = 17/147 (11%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + S+D TDV ++ Y+ AV LK+++++ A F + +DFP + + Sbjct: 127 SEGSKDASGTFSTDVD-EQTAYQNAVDMILKQRDYTGAIAAFQKFQKDFPDSTFTPNTHY 185 Query: 99 MSAFVQYSAGKYQQAA---SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + ++ + ++A + Y S + + D+ Sbjct: 186 WLGQLYFAKKQDKEAVKSFAAVVSYKDSNKRSDAL------------VKLGDIATRNNNA 233 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYV 182 +Y ++V Y NS K A+ ++ Sbjct: 234 TQAKKYYQQVVTEYPNSASAKVAKTHL 260 >gi|255262157|ref|ZP_05341499.1| TPR repeat-containing protein [Thalassiobium sp. R2A62] gi|255104492|gb|EET47166.1| TPR repeat-containing protein [Thalassiobium sp. R2A62] Length = 187 Score = 42.0 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 18/133 (13%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117 + + L ++ A ++F+ P FA A ++ + G+Y A Sbjct: 70 LVRRGRDALDARDHDAAVDHFSALVDHAPDFAEGYAGRAT-----AYFHEGQYGLAIDDL 124 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E + + P YV + G++ ++ D+ +Q L ++ + N P V Sbjct: 125 REVLNRDPNH----YVA-ITGLA--VILEDLGRNQ----DALDGYREVLRIHPNQPEVLV 173 Query: 178 ARFYVTVGRNQLA 190 + A Sbjct: 174 GVERLEALLEGQA 186 >gi|28897836|ref|NP_797441.1| hypothetical protein VP1062 [Vibrio parahaemolyticus RIMD 2210633] gi|260361767|ref|ZP_05774792.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus K5030] gi|260876996|ref|ZP_05889351.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AN-5034] gi|260899067|ref|ZP_05907508.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus Peru-466] gi|28806049|dbj|BAC59325.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|308089158|gb|EFO38853.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus Peru-466] gi|308093912|gb|EFO43607.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AN-5034] gi|308113270|gb|EFO50810.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus K5030] Length = 251 Score = 42.0 bits (98), Expect = 0.095, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + + Y +S Y A +G+ Y Sbjct: 137 YQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYS--------------ANSHYWLGQLYF 182 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A+ F V+ +Y D+ +A+ +L E +A++ + + YP Sbjct: 183 AKKQDKDAVKSFAAVV-SYKDSNKRADALLKLGEIAERNNNAAQAKKYYQQVVDEYPGSA 241 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 242 SAKLAGSKLK 251 Score = 40.9 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 23/124 (18%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A + +++ YP+S +Y +G Y +D K ++ + + Sbjct: 146 KKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKKQD--------KDAVKSFAAV 197 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V Y +S A + A + + A +Q V+ Y + Sbjct: 198 VS-YKDSNKRADALLKLGEI----AERNNNAAQ----------AKKYYQQVVDEYPGSAS 242 Query: 226 AEEA 229 A+ A Sbjct: 243 AKLA 246 Score = 35.5 bits (81), Expect = 8.1, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 49/138 (35%), Gaps = 16/138 (11%) Query: 50 SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY--- 105 T ++ Y+ AV LK+++++ A F Q +D+P + + S + + Sbjct: 126 KYTPNVDEQTAYQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKK 185 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 ++ + Y +K D + ++ + A +Y ++ Sbjct: 186 QDKDAVKSFAAVVSYKD---SNKRAD--------ALLKLGEIAERNNNAA-QAKKYYQQV 233 Query: 166 VERYTNSPYVKGARFYVT 183 V+ Y S K A + Sbjct: 234 VDEYPGSASAKLAGSKLK 251 >gi|260829076|ref|XP_002609488.1| hypothetical protein BRAFLDRAFT_95582 [Branchiostoma floridae] gi|229294845|gb|EEN65498.1| hypothetical protein BRAFLDRAFT_95582 [Branchiostoma floridae] Length = 816 Score = 42.0 bits (98), Expect = 0.096, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 4/56 (7%) Query: 60 VYEKAVLFLKEQNFSKAYE-YFNQCSRDFPFAGVARKSLL-MSAFVQYSAGKYQQA 113 +Y L + + +A E Y R P + A +SL M + + +A Sbjct: 593 IYNLGRLQHDQGRYVEAIETYLEAIRRR-P-SHYAPQSLYNMLGESLFKNSQLAEA 646 >gi|15641836|ref|NP_231468.1| hypothetical protein VC1834 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121585788|ref|ZP_01675582.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121727623|ref|ZP_01680726.1| conserved hypothetical protein [Vibrio cholerae V52] gi|147673656|ref|YP_001217370.1| hypothetical protein VC0395_A1427 [Vibrio cholerae O395] gi|153800377|ref|ZP_01954963.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|153819813|ref|ZP_01972480.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|153828571|ref|ZP_01981238.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|227081963|ref|YP_002810514.1| hypothetical protein VCM66_1757 [Vibrio cholerae M66-2] gi|229508069|ref|ZP_04397574.1| hypothetical protein VCF_003303 [Vibrio cholerae BX 330286] gi|229511692|ref|ZP_04401171.1| hypothetical protein VCE_003101 [Vibrio cholerae B33] gi|229515214|ref|ZP_04404674.1| hypothetical protein VCB_002871 [Vibrio cholerae TMA 21] gi|229518831|ref|ZP_04408274.1| hypothetical protein VCC_002856 [Vibrio cholerae RC9] gi|229529143|ref|ZP_04418533.1| hypothetical protein VCG_002236 [Vibrio cholerae 12129(1)] gi|229607630|ref|YP_002878278.1| hypothetical protein VCD_002542 [Vibrio cholerae MJ-1236] gi|254848920|ref|ZP_05238270.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255745404|ref|ZP_05419353.1| TPR repeat containing exported protein [Vibrio cholera CIRS 101] gi|262149047|ref|ZP_06028190.1| TPR repeat-containing protein [Vibrio cholerae INDRE 91/1] gi|262169823|ref|ZP_06037514.1| TPR repeat-containing protein [Vibrio cholerae RC27] gi|298498127|ref|ZP_07007934.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9656361|gb|AAF94982.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549926|gb|EAX59944.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121630010|gb|EAX62417.1| conserved hypothetical protein [Vibrio cholerae V52] gi|124124003|gb|EAY42746.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|126509652|gb|EAZ72246.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|146315539|gb|ABQ20078.1| conserved hypothetical protein [Vibrio cholerae O395] gi|148875966|gb|EDL74101.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|227009851|gb|ACP06063.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|227013733|gb|ACP09943.1| conserved hypothetical protein [Vibrio cholerae O395] gi|229332917|gb|EEN98403.1| hypothetical protein VCG_002236 [Vibrio cholerae 12129(1)] gi|229343520|gb|EEO08495.1| hypothetical protein VCC_002856 [Vibrio cholerae RC9] gi|229347919|gb|EEO12878.1| hypothetical protein VCB_002871 [Vibrio cholerae TMA 21] gi|229351657|gb|EEO16598.1| hypothetical protein VCE_003101 [Vibrio cholerae B33] gi|229355574|gb|EEO20495.1| hypothetical protein VCF_003303 [Vibrio cholerae BX 330286] gi|229370285|gb|ACQ60708.1| hypothetical protein VCD_002542 [Vibrio cholerae MJ-1236] gi|254844625|gb|EET23039.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255737234|gb|EET92630.1| TPR repeat containing exported protein [Vibrio cholera CIRS 101] gi|262022057|gb|EEY40767.1| TPR repeat-containing protein [Vibrio cholerae RC27] gi|262031147|gb|EEY49768.1| TPR repeat-containing protein [Vibrio cholerae INDRE 91/1] gi|297542460|gb|EFH78510.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|327484389|gb|AEA78796.1| TPR repeat containing exported protein; Putative periplasmic protein contains a protein prenylyltransferase domain [Vibrio cholerae LMA3894-4] Length = 254 Score = 42.0 bits (98), Expect = 0.096, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 57/146 (39%), Gaps = 10/146 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 S+ + + + ++ Y+ AV LK+++++ A F + D+P + + + Sbjct: 118 PTSSNDEAAQGTFSSDANEQAAYQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSANAH 177 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + ++ + ++AA ++ +K D + + D+ + Sbjct: 178 YWLGQLYFAKKEDKEAAKSFAAVVSDKGSNKRAD------ALV---KLGDIAKRNNNAEQ 228 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVT 183 ++ + V+ Y +S K A+ + Sbjct: 229 ARKFYQQAVDEYPDSASAKIAKENLK 254 Score = 38.9 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + Y NS + A +++ G+ Y Sbjct: 140 YQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSANAHYWL--------------GQLYF 185 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + E A F V+++ + +A+ +L + ++AR+ + YP Sbjct: 186 AKKEDKEAAKSFAAVVSD-KGSNKRADALVKLGDIAKRNNNAEQARKFYQQAVDEYPDSA 244 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 245 SAKIAKENLK 254 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 39/126 (30%), Gaps = 27/126 (21%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A + +++ T YP S +Y +G Y D K + + + Sbjct: 149 KKRDYAGAIAAFQKFQTDYPNSTFSANAHYWLGQLYFAKKED--------KEAAKSFAAV 200 Query: 166 VERYTNSPYVKGARFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 V ++ A + RN A + A +Q + Y D+ Sbjct: 201 VSDKGSNKRA-DALVKLGDIAKRNNNAEQ----------------ARKFYQQAVDEYPDS 243 Query: 224 EHAEEA 229 A+ A Sbjct: 244 ASAKIA 249 >gi|297183091|gb|ADI19235.1| hypothetical protein [uncultured delta proteobacterium HF0200_14D13] Length = 906 Score = 42.0 bits (98), Expect = 0.097, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 18/53 (33%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 Y + + + KA +F + P + + A Y K+ +A Sbjct: 518 YVLGFSSHEAKEWGKAVLFFKRLIDQHPQSPFREEGYYRLADSYYQQEKHSEA 570 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 63/185 (34%), Gaps = 35/185 (18%) Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYP-------ESKNV-DYVYYLVGMSYAQMIRDVP 149 L+ + Y G + QA + P ++ + + +L + RD Sbjct: 407 LIQGYALYQTGDHLQAYGALQ------PALATSQGGNEWIWEQALFLR-STIELRSRDFK 459 Query: 150 YDQRATKLMLQYMSRIVERYTNSPY-----VKGARFYVTVGRNQLAAKEVEI------GR 198 R + +L R S Y V + QL ++V GR Sbjct: 460 KADRHLQELLSKFEESNRR---SEYYYWLGVLQLEQRKPLRGVQLGMRQVRPDGPRGDGR 516 Query: 199 YYL------KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 +Y+ + E+ A+ F+ ++ + + EE RL ++Y EA V S Sbjct: 517 WYVLGFSSHEAKEWGKAVLFFKRLIDQHPQSPFREEGYYRLADSYYQQEKHSEADRVFSE 576 Query: 253 IQERY 257 ++ + Sbjct: 577 YRKEF 581 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 72/194 (37%), Gaps = 24/194 (12%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + +++ ++ ++ + L+ ++F KA + + F + + +Q K + Sbjct: 438 EWIWEQALFLRSTIELRSRDFKKADRHLQELLSKFEESNRRSEYYYWLGVLQLEQRKPLR 497 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 LG + P+ D +Y++G S ++ + + + R+++++ S Sbjct: 498 GVQLGMRQVR--PDGPRGDGRWYVLGFS--------SHEAKEWGKAVLFFKRLIDQHPQS 547 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 P+ + + + Y ++ ++ A F + + R Sbjct: 548 PFREEGYYRL--------------ADSYYQQEKHSEADRVFSEYRKEFQVLSKPVRVIER 593 Query: 233 LVEAYVALALMDEA 246 V+ + L ++EA Sbjct: 594 QVQNLMKLGKLEEA 607 >gi|145352000|ref|XP_001420347.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580581|gb|ABO98640.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 576 Score = 42.0 bits (98), Expect = 0.097, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 56/186 (30%), Gaps = 24/186 (12%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 YQ+ K + I + + ++ + + + E K LK+ + A Sbjct: 410 YQMDKMLIGAARQIVPALVEAYPDILEAELERLNPPEAPGESEK-TKGNEALKQGKYQDA 468 Query: 77 YEYFNQCSRDFPFAGV--ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 EY++ P + + A +++ G YQ A E I + YV Sbjct: 469 IEYYSVAIGKNPKSKIFVANRAM-----AHLKLGNYQLAEDDCTEAIKL-----DARYVK 518 Query: 135 -YLVGMSYAQMIRDVPYD-QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 YL R L + N+ K + + +A Sbjct: 519 AYLR--------RAAARSVAGNYLEALMDYEEALRFEPNNSDAKREVYRMKKIIG-MADP 569 Query: 193 EVEIGR 198 +++G Sbjct: 570 GMDVGD 575 >gi|108759977|ref|YP_631572.1| putative adventurous gliding protein T [Myxococcus xanthus DK 1622] gi|108463857|gb|ABF89042.1| putative adventurous gliding protein T [Myxococcus xanthus DK 1622] Length = 499 Score = 42.0 bits (98), Expect = 0.097, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 58/217 (26%), Gaps = 29/217 (13%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 + + + A+ + + A + F + P + + Sbjct: 59 PEQKPVPPPAQKSGSAQSAFAAALQSYEAGDLDGARKGFEAVVDELPQS---LNAQFNLG 115 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + G+ A E+ + P V V L G+ Y Q + Sbjct: 116 VIAERQGRPDDARVAYEKVLLLDPAH--VPAVVNL-GVMY--------RAQGRLDEAIAL 164 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 R ++ Y +++ ++A K E AA R VL Sbjct: 165 FQRALKT-PGREYDASLLNSLSITY-RVAG----------KLDESEAAARR---VLVRNK 209 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 D A + +A + A L + E P Sbjct: 210 DDPGAYKNLAHVAYAREKYRLAELLAGTARKHSENDP 246 >gi|324021716|ref|NP_001191213.1| serine/threonine-protein phosphatase 5 isoform 2 [Homo sapiens] Length = 477 Score = 42.0 bits (98), Expect = 0.098, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102 + ++ E+ +A + K +++ A ++++Q P +S A+ Sbjct: 18 EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 74 Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y+ G +A L ++YI YY S + + L Sbjct: 75 TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 116 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + +V+ + A+ + K E Sbjct: 117 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149 >gi|126327904|ref|XP_001367838.1| PREDICTED: similar to Collagen prolyl 4-hydroxylase alpha III subunit [Monodelphis domestica] Length = 559 Score = 42.0 bits (98), Expect = 0.098, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 39/126 (30%), Gaps = 17/126 (13%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK--------AVLFLKEQNFS 74 AL + + G + + V VTD+ R+V+ + ++ Sbjct: 154 ALMRLQDVYTLSVKGLAHGAFQRVTGSQVTDLYRPRQVFSLSADDCFHVGKVAYDMGDYY 213 Query: 75 KAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 A + F + +L AF + AG A L E++ P Sbjct: 214 HAISWLEVAVSLFRGSYGEWNTEDEGSLEDALDYLAFAYFQAGNVSNALRLSREFLHYNP 273 Query: 126 ESKNVD 131 +K V Sbjct: 274 NNKRVA 279 >gi|78101457|pdb|2AVP|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix Length = 70 Score = 42.0 bits (98), Expect = 0.098, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 3/67 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + K+ ++ +A EY+ + P + ++ Y G Y +A ++ Sbjct: 7 YNLGNAYYKQGDYDEAIEYYQKALELDPRSA---EAWYNLGNAYYKQGDYDEAIEYYQKA 63 Query: 121 ITQYPES 127 + P S Sbjct: 64 LELDPRS 70 >gi|237830289|ref|XP_002364442.1| serine/threonine protein phosphatase, putative [Toxoplasma gondii ME49] gi|211962106|gb|EEA97301.1| serine/threonine protein phosphatase, putative [Toxoplasma gondii ME49] gi|221507312|gb|EEE32916.1| serine/threonine protein phosphatase, putative [Toxoplasma gondii VEG] Length = 548 Score = 42.0 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 49/172 (28%), Gaps = 36/172 (20%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVAR-----KSLL-MSAFVQYS 106 V + + F K + F +A E + A+ + LL AF Q + Sbjct: 58 VAEAESLKTEGNEFFKTRLFHQAVEKYTAAIDLICSNTMTAQTKQILQVLLCNRAFCQIN 117 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y A E I P YY G +Y + R K + R++ Sbjct: 118 LENYGSAVVDAERVIQMNPLFAK---AYYRRGCAYCCLSR--------YKKAQKDFERVI 166 Query: 167 ERY--TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + + + Q+ + + AAI Q + Sbjct: 167 ALSATPD----PSVVSRLNECKKQI------------RLEAFAAAIETQQTM 202 >gi|197335090|ref|YP_002155725.1| Tol system periplasmic component YbgF [Vibrio fischeri MJ11] gi|197316580|gb|ACH66027.1| Tol system periplasmic component YbgF [Vibrio fischeri MJ11] Length = 257 Score = 42.0 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ ++ + V Y +S Y A +++ G+ Y Sbjct: 141 YQNAVDLILKEKNYAGATKAFQEFVTAYPDSVYSSNAHYWL--------------GQLYF 186 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + V A F V+ +Y+D+ +A+ +L E A++ + YP Sbjct: 187 AQKNDVEAAKSFAKVV-SYTDSNKRADALLKLGEVAKRNNNDAAAKKYYQKVVSEYPDST 245 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 246 TAKTAASKLK 255 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 46/132 (34%), Gaps = 14/132 (10%) Query: 57 QREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + Y+ AV LKE+N++ A + F + +P + + + + ++ +A Sbjct: 137 ENAAYQNAVDLILKEKNYAGATKAFQEFVTAYPDSVYSSNAHYWLGQLYFAQKNDVEA-- 194 Query: 116 LGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + + Y +S +G + D +Y ++V Y +S Sbjct: 195 -AKSFAKVVSYTDSNKRADALLKLGEVAKRNNNDA--------AAKKYYQKVVSEYPDST 245 Query: 174 YVKGARFYVTVG 185 K A + Sbjct: 246 TAKTAASKLKSL 257 >gi|150024239|ref|YP_001295065.1| BatE protein [Flavobacterium psychrophilum JIP02/86] gi|149770780|emb|CAL42245.1| BatE protein [Flavobacterium psychrophilum JIP02/86] Length = 247 Score = 42.0 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 10/83 (12%), Positives = 27/83 (32%), Gaps = 9/83 (10%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-SLL--MSAFVQYSA 107 +T + + ++K ++ N+ +A + + ++ + L Y Sbjct: 11 ITQTFWAQTAFDKGNNLYQKGNYQEAITVYESVVKS------GQQSAELYFNLGNCYYKL 64 Query: 108 GKYQQAASLGEEYITQYPESKNV 130 K A E+ + P + Sbjct: 65 NKVAPAIFNFEKALLLNPNDSEI 87 >gi|123509584|ref|XP_001329892.1| TPR Domain containing protein [Trichomonas vaginalis G3] gi|121912942|gb|EAY17757.1| TPR Domain containing protein [Trichomonas vaginalis G3] Length = 264 Score = 42.0 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 34/106 (32%), Gaps = 14/106 (13%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARKSLLMS 100 D+ + D ++ K L N +A Y+ F ++ Sbjct: 57 DLIPEPKYDTDAANKLKVKGNEALSAGNVDEAIRYYTEAIKVDPSQHIF--YCNRAA--- 111 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 + G YQ A E+ I+ P Y +G++ ++ + Sbjct: 112 --AYTTKGDYQAAIDDSEKAISLNPTFPKS---YSRLGLALYKLNK 152 >gi|115371978|ref|ZP_01459290.1| branched-chain amino acid transport system substrate-binding protein, putative [Stigmatella aurantiaca DW4/3-1] gi|115370943|gb|EAU69866.1| branched-chain amino acid transport system substrate-binding protein, putative [Stigmatella aurantiaca DW4/3-1] Length = 713 Score = 42.0 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 71/228 (31%), Gaps = 47/228 (20%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE--YIT-QYPESK 128 + +A E + +P ++++L + + Y A Y A E + YP+++ Sbjct: 72 DRKRAAESLLVVRKTYPETTASQEALYRAGVLFYEAEDYANARKSFNELLFENPIYPQAQ 131 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN- 187 +V + + A + Q +S + ER + + + Sbjct: 132 DV-----------KLKLARSALEVGAYRDAYQTLSSLAER-------AEGAERLKLLEDA 173 Query: 188 -QLAAK----------EVEIGRYYLKRGEYVAAIPRFQLVLA---NYSDAEHAEEAM--- 230 + A EVE+ E AA R + V+ ++ D E + Sbjct: 174 SRAAQGAGLYSSALTLEVELAEQAKTPEEQAAAAKRLEQVVEGRADFVDIARVAEGLSPR 233 Query: 231 --------ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 +L Y L E ++ P +A + L+ Sbjct: 234 HPAWPILTFKLARIYYHLRDWTRLEETLNRFLLEAPSHPFAAQAKELL 281 Score = 36.2 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 26/67 (38%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 Q +Y VLF + ++++ A + FN+ + P A+ L A G Y Sbjct: 88 PETTASQEALYRAGVLFYEAEDYANARKSFNELLFENPIYPQAQDVKLKLARSALEVGAY 147 Query: 111 QQAASLG 117 + A Sbjct: 148 RDAYQTL 154 >gi|71278988|ref|YP_270904.1| lysM domain-containing protein [Colwellia psychrerythraea 34H] gi|71144728|gb|AAZ25201.1| lysM domain protein [Colwellia psychrerythraea 34H] Length = 524 Score = 42.0 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 87/285 (30%), Gaps = 62/285 (21%) Query: 19 LYKFAL-TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK----AVLFLKEQNF 73 + K+ + T+ +I++ L G QS + V + + E+ + +LK + Sbjct: 1 MAKYLISTLLTAISMTLLSGCVTQSFENNE-PIVKNQANRDEMAATRISLGLGYLKMGDM 59 Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA--GKYQQAASLGEE----------YI 121 S+A + + F+ + +AF Y G+ A E+ + Sbjct: 60 SQAKLNLEKAKK---FSP--NLVQVHTAFAHYYETVGEGTLAIESFEQALSIKADSADTL 114 Query: 122 TQY------PESKNVDYVYYLVGMS---------YAQMIRDVPYDQRATKLMLQYMSRIV 166 Y + V +L ++ + + + Y+++ + Sbjct: 115 NNYGVFLCRQGNVAAAEVQFLKAIAVPSYLLVSESYENLASCYLQNDNFEKAEMYLNKSI 174 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 N F + + G Y A R+ L + + Sbjct: 175 YHSPN---RTSTLFQMVRLQ--------------YAMGNYKEA-KRY---LQKFERSTQR 213 Query: 227 EEA--MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 A ++ + Y L AR +++ + YPQ W L Sbjct: 214 FTANSLSLAYKLYWKLGQRRTARNYANMLVKMYPQS-WEGKQYLL 257 >gi|296448864|ref|ZP_06890696.1| tol-pal system protein YbgF [Methylosinus trichosporium OB3b] gi|296253630|gb|EFH00825.1| tol-pal system protein YbgF [Methylosinus trichosporium OB3b] Length = 197 Score = 42.0 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 30/66 (45%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +G + R + A +F + + + A EAM RL ++ A+ ++A + I Sbjct: 114 LYLGESFFLRERHREAAEKFLEISTKFPSSPQAPEAMLRLGQSLHAIGAKEQACASFNEI 173 Query: 254 QERYPQ 259 +YP Sbjct: 174 AVKYPG 179 Score = 39.3 bits (91), Expect = 0.56, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 10/111 (9%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYV-YYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 G+Y+ A ++ + +SK YL G S+ R + + Sbjct: 85 RLGEYEAAEKGFSGFLAKNAKSKLAPQATLYL-GESFFLRERH--------REAAEKFLE 135 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 I ++ +SP A + + + AKE + +Y A R + Sbjct: 136 ISTKFPSSPQAPEAMLRLGQSLHAIGAKEQACASFNEIAVKYPGAPARVKE 186 Score = 35.5 bits (81), Expect = 7.6, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 1/77 (1%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + + Q +Y F + +A E F + S FP + A +++L ++ G + Sbjct: 106 SKLAPQATLY-LGESFFLRERHREAAEKFLEISTKFPSSPQAPEAMLRLGQSLHAIGAKE 164 Query: 112 QAASLGEEYITQYPESK 128 QA + E +YP + Sbjct: 165 QACASFNEIAVKYPGAP 181 >gi|158425009|ref|YP_001526301.1| von Willebrand factor type A [Azorhizobium caulinodans ORS 571] gi|158331898|dbj|BAF89383.1| von Willebrand factor type A [Azorhizobium caulinodans ORS 571] Length = 725 Score = 42.0 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 10/70 (14%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A K ++ KA E +++ P A AGK A +E + Sbjct: 410 QASALYKAGDYEKAAEAYSRL----PNGAY------NQANALARAGKLDDAVKAYDEALK 459 Query: 123 QYPESKNVDY 132 Q P++ + Y Sbjct: 460 QNPDNADAIY 469 >gi|108761475|ref|YP_630180.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622] gi|108465355|gb|ABF90540.1| MJ0042 family finger-like domain/tetratricopeptide repeat protein [Myxococcus xanthus DK 1622] Length = 1628 Score = 42.0 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 45/143 (31%), Gaps = 28/143 (19%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS----- 106 D R R + + ++ A + + A K+ +V Y Sbjct: 1507 ADPRRTRVLGSIGDAYFAAARWNDAIKRYQS----------ALKADPKLTYVYYKVARAF 1556 Query: 107 --AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++ +A + + +S+N YY +G +Y + + + +Q Sbjct: 1557 TEQAQHAKAIDWYRKATSL--DSEN-PMAYYYLGFAYKERNKR--------REAVQAFKD 1605 Query: 165 IVERYTNSPYVKGARFYVTVGRN 187 + R ++ K + +N Sbjct: 1606 YLSRKPDATDRKDIEDEIYDLQN 1628 >gi|3114755|emb|CAA76671.1| competence lipoprotein [Campylobacter jejuni] Length = 164 Score = 42.0 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 9/106 (8%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L++ A +Y+ A +EY ++ S+N DY+ YL + +Q Sbjct: 20 LIILAQAHMDEEEYKLAEFYLDEYNKKFGNSRNADYIRYLKIKAKFDAFAVPNRNQALML 79 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + + ++ Y + Y + +T + +YL Sbjct: 80 ESQKEIDTFLKDYPYTEYEPLVQTMLTK---------FNLAVFYLN 116 >gi|71023563|ref|XP_762011.1| hypothetical protein UM05864.1 [Ustilago maydis 521] gi|46101576|gb|EAK86809.1| hypothetical protein UM05864.1 [Ustilago maydis 521] Length = 706 Score = 42.0 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 16/127 (12%), Positives = 36/127 (28%), Gaps = 20/127 (15%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMS 100 +D D Y + + F A + + + F F+ + Sbjct: 481 KDFDKAIEADAEDPDIYYHRGQVNFILGEFEAAIKDYEKSTSLDDTFIFS------QVQY 534 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A Y + + + + + S Y YY ++ DQ+ + + Sbjct: 535 AVAHYKNNNIGHSTAAFRKLLRNFDTSSEA-YNYY----------GELLLDQQKFEEAMD 583 Query: 161 YMSRIVE 167 + +E Sbjct: 584 KFDKAIE 590 >gi|315608112|ref|ZP_07883105.1| tetratricopeptide (TPR) domain protein [Prevotella buccae ATCC 33574] gi|315250581|gb|EFU30577.1| tetratricopeptide (TPR) domain protein [Prevotella buccae ATCC 33574] Length = 252 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 47/128 (36%), Gaps = 15/128 (11%) Query: 72 NFSKAYEYFNQ-CSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESK 128 N+++A +Y ++ + F+ +S +A + G+Y +A L E+ + E++ Sbjct: 77 NYAEAIQYLDKAIPQLSAFSPH-ERSFYYWSNAESHFLLGRYDEAIPLYEKMLNLCYENE 135 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 D +Y +G + + + Y + Y R + N Sbjct: 136 KAD-AFYRLGFCHMFA--------EDWQKACDNYKQAAHYY--TYYRPEERARLVQINNM 184 Query: 189 LAAKEVEI 196 +A E I Sbjct: 185 IAGCEKHI 192 >gi|260768864|ref|ZP_05877798.1| TPR repeat-containing protein [Vibrio furnissii CIP 102972] gi|260616894|gb|EEX42079.1| TPR repeat-containing protein [Vibrio furnissii CIP 102972] gi|315180557|gb|ADT87471.1| hypothetical protein vfu_A02340 [Vibrio furnissii NCTC 11218] Length = 260 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 55/146 (37%), Gaps = 10/146 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 + S ++ + + ++ YE AV LK+++++ A F Q +D+P + A S Sbjct: 124 DTSQSEEIPAGTFSSDADEQAAYENAVDLILKKRDYAGAIAAFQQFQKDYPNSNFASNSH 183 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + ++ + +A + +K D + D+ Sbjct: 184 YWLGQLYFAKKQDPEAVKSFAAVLAYKDSNKRAD---------AMVKLGDIAKRNNNAAQ 234 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVT 183 +Y ++V+ Y +S K A+ + Sbjct: 235 AKKYYQQVVDEYPDSASAKVAKENLK 260 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 40/125 (32%), Gaps = 25/125 (20%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A + +++ YP S +Y +G Y +D ++ + + Sbjct: 155 KKRDYAGAIAAFQQFQKDYPNSNFASNSHYWLGQLYFAKKQDP--------EAVKSFAAV 206 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA-AIPRFQLVLANYSDAE 224 + Y +S A + KR A A +Q V+ Y D+ Sbjct: 207 L-AYKDSNKRADAMVKLGDI---------------AKRNNNAAQAKKYYQQVVDEYPDSA 250 Query: 225 HAEEA 229 A+ A Sbjct: 251 SAKVA 255 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 44/114 (38%), Gaps = 15/114 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + + + Y NS + + +++ G+ Y + + A+ F VL Sbjct: 162 AIAAFQQFQKDYPNSNFASNSHYWL--------------GQLYFAKKQDPEAVKSFAAVL 207 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 A Y D+ +AM +L + +A++ + + YP A+ + +K Sbjct: 208 A-YKDSNKRADAMVKLGDIAKRNNNAAQAKKYYQQVVDEYPDSASAKVAKENLK 260 >gi|188997451|ref|YP_001931702.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188932518|gb|ACD67148.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 297 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 88/255 (34%), Gaps = 55/255 (21%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 FF++ + L+ V D +Y +YE + +L N + A +Y + + Sbjct: 5 FFALTLAILISSCANPQSYESDLRVGDGKY---LYEMGISYLNSGNNAMAIKYLEEALKS 61 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 + + A AG++ +A ++ I +YP+ + ++ ++ Sbjct: 62 Y----DKPEVYNALALAYQFAGEFTKAEAIFRLGIDKYPDYPEL--------LTNYGILL 109 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE----------- 195 Q+ ++Y + + + A + + + QL +++ Sbjct: 110 AS---QKKFNEAIKYFEKAINN-PTYSGKEKAYYNLGMVYLQLGKEDLFLSNLEKALMFN 165 Query: 196 ---------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM----------ARLVEA 236 +G YYL +Y AA + +L E+ +A+ RL + Sbjct: 166 SNFVNAYITLGDYYL--DKYNAAHN--KEMLKK--TREYYSKALNYVANDPSIYFRLGKV 219 Query: 237 YVALALMDEAREVVS 251 Y L + A+ + Sbjct: 220 YHELGDDELAKYYLE 234 >gi|153832523|ref|ZP_01985190.1| Tol system periplasmic component YbgF [Vibrio harveyi HY01] gi|148871318|gb|EDL70190.1| Tol system periplasmic component YbgF [Vibrio harveyi HY01] Length = 251 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + + Y +S Y A +G+ Y Sbjct: 137 YQDAVDLILKKRDYTGAIAAFQQFQKDYPDSTYS--------------ANSHYWLGQLYF 182 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A+ F V+ +Y D+ +A+ +L + +A++ + + YP Sbjct: 183 AKKQDKEAVKSFAAVV-SYKDSNKRADALVKLGDIAERNKNDAQAKKYYQQVVDEYPGSA 241 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 242 SAKVAASKLK 251 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 42/124 (33%), Gaps = 23/124 (18%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A + +++ YP+S +Y +G Y +D K ++ + + Sbjct: 146 KKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKKQD--------KEAVKSFAAV 197 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V Y +S A + + + + +YY Q V+ Y + Sbjct: 198 VS-YKDSNKRADALVKLGDIAER-NKNDAQAKKYY-------------QQVVDEYPGSAS 242 Query: 226 AEEA 229 A+ A Sbjct: 243 AKVA 246 >gi|126725521|ref|ZP_01741363.1| hypothetical protein RB2150_04933 [Rhodobacterales bacterium HTCC2150] gi|126704725|gb|EBA03816.1| hypothetical protein RB2150_04933 [Rhodobacterales bacterium HTCC2150] Length = 271 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 49/157 (31%), Gaps = 25/157 (15%) Query: 34 FLVGWERQSSRDVYLDSVTDVR---YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 L G +++ S T + +E+A L + + A F+ +P + Sbjct: 122 TLGGVSTGATQPTVAPSTTGPELAMSESGDFERAKTKLANGDSAGASIDFSTFLETYPGS 181 Query: 91 GVARKSLLMSAFVQYSAGKYQQAA----SLGEEYITQYPESKN---VDYVYYLVGMSYAQ 143 + + Y G+ +A + ++ + + +G+ + Sbjct: 182 PLTYEVQ-------YYLGEALEAQSQNKAAARAFLNSFSGDPQGALAPDALFRIGV-NLE 233 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + VP S + RY N+ V A+ Sbjct: 234 ALGQVP-------DACSMWSELGLRYPNASAVIQAQA 263 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 32/104 (30%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 S +E Y SP ++Y+ + AA F Sbjct: 167 ASIDFSTFLETYPGSPLTYEVQYYLGEALEAQSQN--------------KAAARAFLNSF 212 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + A +A+ R+ AL + +A + S + RYP Sbjct: 213 SGDPQGALAPDALFRIGVNLEALGQVPDACSMWSELGLRYPNAS 256 >gi|320159497|ref|YP_004172721.1| hypothetical protein ANT_00870 [Anaerolinea thermophila UNI-1] gi|319993350|dbj|BAJ62121.1| hypothetical protein ANT_00870 [Anaerolinea thermophila UNI-1] Length = 409 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 81/268 (30%), Gaps = 60/268 (22%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMS 100 ++ +++ + T R ++A F E F++A + D L Sbjct: 42 NTPPLFVPTPTPTRSPESFLQEARAFAAEGRFTQAEAAYQQALQAD----PKNITIYLEL 97 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNV----DYVY-----YL--------------- 136 A +Q GKY +A E I P S + YL Sbjct: 98 ARLQALYGKYAEAQKNAENAILLNPNSSLAHAIHGWALGLQGEYLPAQAELNKAIEIEPG 157 Query: 137 VGMSYAQMIRDVPY-------DQRATKLMLQYMSRIVERYTN---------------SPY 174 G++YA + + D + ++ + VE + S Y Sbjct: 158 NGLAYAYLAEVLALQKIEGKDDPTTLEKAIEASRKAVELAPDQMESYRARGYVLEITSNY 217 Query: 175 VKG--ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA--EHAEEAM 230 A + LA + +GR Y + Y AI F +A D + E A+ Sbjct: 218 ADAVVAFQQAIALNDNLADLHLALGRNYKAQDIYDKAIEEFNKAIALRPDDPRPYVETAL 277 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYP 258 Y+ +A + ++ P Sbjct: 278 -----TYLRYGEYAKAAQYAEQAIQQDP 300 >gi|322421634|ref|YP_004200857.1| family 2 glycosyl transferase [Geobacter sp. M18] gi|320128021|gb|ADW15581.1| glycosyl transferase family 2 [Geobacter sp. M18] Length = 607 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 D + E Y+ + + E + + A ++ +P A + A + Y G + Sbjct: 450 EDEQSAEERYQTSQDLVAEGDLAAAEAVLHKIIALYP--EFAP-AHNDLAVLAYQHGDKE 506 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 A + E+ P + + ++ I D Sbjct: 507 TARARYEKAARLAPGNST-----FQKNLADFYFIEGCDVD 541 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 39/121 (32%), Gaps = 13/121 (10%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + E Y + FLK +A +P VA A V Y AG Sbjct: 269 APAAELSANEAYAELAAFLKAGEPQQATTALKNHLARYPQHAVAHN---DLAAVSYQAGD 325 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 +QA + + PE ++V Y ++ + D + +++E+ Sbjct: 326 VEQALQHYRQAVRLEPE-ESV----YQKNLADLLFVETGETD-----EAINIYLKLLEKA 375 Query: 170 T 170 Sbjct: 376 P 376 >gi|253996760|ref|YP_003048824.1| hypothetical protein Mmol_1391 [Methylotenera mobilis JLW8] gi|253983439|gb|ACT48297.1| Tetratricopeptide TPR_2 repeat protein [Methylotenera mobilis JLW8] Length = 405 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 24/128 (18%) Query: 49 DSVTDVRYQREVYEKA----------VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 D + YQ+ +Y A V++ K + KA E F +A A Sbjct: 63 DELAIEAYQKSIYADASFVEAYNGLGVIYAKHGKYQKAIEAFKSALN---YAPAAAHLYS 119 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 + Y G+Y +A + ++ T P + +GM+YA+ + Sbjct: 120 NMGYAYYLQGQYAEAVATLKQATTLDPTNLR---ALNNLGMAYAKS--------GSQGES 168 Query: 159 LQYMSRIV 166 +Q ++ + Sbjct: 169 VQAFTQAI 176 >gi|114677997|ref|XP_001167730.1| PREDICTED: protein phosphatase 5, catalytic subunit isoform 2 [Pan troglodytes] Length = 442 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 31/156 (19%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102 + ++ E+ +A + K +++ A ++++Q P +S A+ Sbjct: 18 EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 74 Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y+ G +A L ++YI YY S + + L Sbjct: 75 TECYGYALGDATRAIELDKKYIK----------GYYRRAASNMAL--------GKFRAAL 116 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + +V+ + A+ + K E Sbjct: 117 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149 >gi|311745199|ref|ZP_07718984.1| hypothetical protein ALPR1_01835 [Algoriphagus sp. PR1] gi|126577722|gb|EAZ81942.1| hypothetical protein ALPR1_01835 [Algoriphagus sp. PR1] Length = 275 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 9/66 (13%), Positives = 24/66 (36%), Gaps = 3/66 (4%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + + ++ +L ++ + +A E F + P + + A + + Sbjct: 191 DPQNEDAIFNMGILAIQSGQYKRAAERFEDLIKYHPQN---LQGQFYLGVSYFEANQKSK 247 Query: 113 AASLGE 118 A + E Sbjct: 248 AKAQFE 253 >gi|91084547|ref|XP_973113.1| PREDICTED: similar to AGAP003727-PA [Tribolium castaneum] gi|270009248|gb|EFA05696.1| translocase of outer membrane 34 [Tribolium castaneum] Length = 923 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 15/130 (11%), Positives = 35/130 (26%), Gaps = 20/130 (15%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-----MSAFVQYSAGKYQQAASL 116 E+ K N+ A + + + + L A GK+++A S Sbjct: 11 EEGNAAFKSGNWDSAAKLYTKAINL----ETSESRDLSVFLKNRAAAYLKLGKFEEALSD 66 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + + P + Q + + + A + Q N+ ++ Sbjct: 67 CDRSLEIVPRDPK---ALFRR----CQALEALERFEEAYRDATQIFKD----DPNNRTIQ 115 Query: 177 GARFYVTVGR 186 + Sbjct: 116 PVLERLYRIV 125 >gi|86143683|ref|ZP_01062059.1| BatE, TRP domain containing protein [Leeuwenhoekiella blandensis MED217] gi|85829726|gb|EAQ48188.1| BatE, TRP domain containing protein [Leeuwenhoekiella blandensis MED217] Length = 257 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 26/78 (33%), Gaps = 3/78 (3%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + + ++++E + NF +A + + + + A Y + Sbjct: 24 NAQTPQQLFETGNSQYAQNNFEEAIKNYEKVLDS---GYESAAVYYNLANANYKLNRIAP 80 Query: 113 AASLGEEYITQYPESKNV 130 + E+ + P K + Sbjct: 81 SVYNYEKALALKPNDKEI 98 >gi|253701597|ref|YP_003022786.1| type II and III secretion system protein [Geobacter sp. M21] gi|251776447|gb|ACT19028.1| type II and III secretion system protein [Geobacter sp. M21] Length = 870 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 60/198 (30%), Gaps = 42/198 (21%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +++ + + L G R + KA +E N A Sbjct: 1 MHRPRPILTLMLVALALSGCTSG----------------RTAFSKAEKLEREGNLDAALV 44 Query: 79 YFNQCSRDFP-FAGVARKSLLMS----AFVQYSAGK-------YQQAASLGEEYITQY-- 124 + + S P K LL A V + G+ Y +A E+ + Y Sbjct: 45 KYAEVSAANPDIGEYRVK-LLNITETAARVHFKKGEEFFAKNNYDEAL---REFQSAYAM 100 Query: 125 -PES----KNVDYVYYLV-GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 P + D+V L +Y D +++ + + +E + ++ K Sbjct: 101 DPTNVLAKNQADHVLKLRNAQTYLLEGLDFEKNRKP-REAMIAFKHALEFHPSNKEAKEG 159 Query: 179 RFYVTV-GRNQLAAKEVE 195 + R +L E+ Sbjct: 160 LDRIIANKRQKLDGFELN 177 >gi|89891520|ref|ZP_01203025.1| putative histidine kinase [Flavobacteria bacterium BBFL7] gi|89516294|gb|EAS18956.1| putative histidine kinase [Flavobacteria bacterium BBFL7] Length = 591 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 4/81 (4%) Query: 47 YLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLL--MSAF 102 Y + D +++Y K + + +A YF + + +P + ++ A Sbjct: 211 YYEKQEDFETLKDLYNSKGQTLKQSNQYDEAIYYFEKALNDFYPIENQEKMGMVTRNLAD 270 Query: 103 VQYSAGKYQQAASLGEEYITQ 123 Y YQQ+A L + I Sbjct: 271 AYYLNKNYQQSARLYRDKIRI 291 >gi|53719291|ref|YP_108277.1| hypothetical protein BPSL1666 [Burkholderia pseudomallei K96243] gi|52209705|emb|CAH35664.1| hypothetical protein BPSL1666 [Burkholderia pseudomallei K96243] Length = 1454 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A L L +F +A F + P A +S + + A + + + Sbjct: 909 RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 965 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + ++ ++Y Sbjct: 966 LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 997 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 +LA+ G Y Y A++ R + H EA+ L Sbjct: 998 VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 1051 Query: 240 LALMDEAREVVS 251 + + E+ EV+ Sbjct: 1052 VDRLAESEEVLR 1063 >gi|50554807|ref|XP_504812.1| YALI0F00286p [Yarrowia lipolytica] gi|49650682|emb|CAG77614.1| YALI0F00286p [Yarrowia lipolytica] Length = 1442 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 12/79 (15%) Query: 58 REVYEKAVLFLKEQNFSKAYEY----FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 +E+ ++ + F A E ++ ++ L+ QY A Sbjct: 7 KELLKRCKEAISSGRFPDAIEAANDALEVDEENY-------QATLLLGKAQYLNKDNTAA 59 Query: 114 ASLGEEYITQYPESKNVDY 132 + ++ I P + Y Sbjct: 60 CAAYDKAIKLEPTQP-LAY 77 >gi|317178432|dbj|BAJ56220.1| paralysed flagella protein [Helicobacter pylori F30] Length = 803 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 188 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 247 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP ++ V Y V + + K ++Y RI+ Sbjct: 248 IKKSLLIDIGTKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 299 Query: 168 RYTNSPYVKGARFYVTV 184 Y +S Y A+ + + Sbjct: 300 EYKDSHYAPLAQMRLAI 316 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 217 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPSIPEVLYY 276 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 277 VAKALDENNNYKQAMRYYKRILLEYKDSHYAPLAQMRLA 315 >gi|261839992|gb|ACX99757.1| paralysed flagella protein [Helicobacter pylori 52] Length = 801 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 9/137 (6%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y Y +A + Q + A ++ +++P + L+ G Sbjct: 186 PLLTTKGYDLNAYLEAKKQINSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIALGQLG 245 Query: 109 -KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 K +G ++I YP ++ V Y V + + K ++Y RI+ Sbjct: 246 IKKSLLIDIGTKWIKNYPTDPSIPEVLYYVAKALDEN--------NNYKQAMRYYKRILL 297 Query: 168 RYTNSPYVKGARFYVTV 184 Y +S Y A+ + + Sbjct: 298 EYKDSHYAPLAQMRLAI 314 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + RA + ++ + L I + + TD +Y Sbjct: 215 RTISRAFKNYPQTIFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPSIPEVLYY 274 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 A + N+ +A Y+ + ++ + A + + A Sbjct: 275 VAKALDENNNYKQAMRYYKRILLEYKDSHYAPLAQMRLA 313 >gi|253699088|ref|YP_003020277.1| hypothetical protein GM21_0439 [Geobacter sp. M21] gi|251773938|gb|ACT16519.1| Tetratricopeptide domain protein [Geobacter sp. M21] Length = 1090 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 26/54 (48%) Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 AI +Q +L Y E ++ + ++ +Y L ++A V+ + +P+ + Sbjct: 161 AIALYQKLLDKYPHYEGNDQVLYQMSRSYEELGQTEDAMAVMQRMVNDFPRSRY 214 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 36/109 (33%), Gaps = 8/109 (7%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 +A + + +P + L + G+ + A ++ + + +P S+ + V Sbjct: 159 QEAIALYQKLLDKYPHYEGNDQVLYQMSRSYEELGQTEDAMAVMQRMVNDFPRSRYIHEV 218 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + + + R +VE S Y + A + + Sbjct: 219 QFRRA--------EYFFTHRQYLEAEPVYKGLVEIGPESSYYELALYKL 259 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 53/140 (37%), Gaps = 13/140 (9%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY 61 S VL A + Y+L +A + V LV SR+ + D++ +Y Sbjct: 593 SEVLKSAWVVAAHSCYELRNYAEAEAAYVQVLALVP-AEDKSREGFNDNL-----AASIY 646 Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + + A ++F + R + + + +A +++ AA++ + Sbjct: 647 KQGEQANAAKEYRLAADHFLRIGRMAATSKIRVNAEFDAAVALIQLKEWKTAATVLTGFR 706 Query: 122 TQYPESK-------NVDYVY 134 +P + + YVY Sbjct: 707 GLFPGHEMQPEVTRKLAYVY 726 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 27/203 (13%), Positives = 61/203 (30%), Gaps = 25/203 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + +A F + + +A + P + +L + Y Y + + Sbjct: 220 FRRAEYFFTHRQYLEAEPVYKGLVEIGPESSYYELALYKLGWSFYKQELYDEGLH---RF 276 Query: 121 ITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 I + S D+ Q D+ K + + + ++ A Sbjct: 277 IALLDHKVSTGYDFA---------QTTDDLER-----KRVDDTFRVLSQSFSYLHGAASA 322 Query: 179 RFYVTVGRNQLAAKEVEI----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 Y +N A E + G +Y ++ Y A + ++ + + R++ Sbjct: 323 VEYFE--KNGKRAYEDRVYGNLGEFYYEKRRYSDAAASYNAFVSRNPFHRASPQFQMRVI 380 Query: 235 EAYVALALMDEAREVVSLIQERY 257 E ++A E + Y Sbjct: 381 EIHIAGGFPTLVIEAKKEFAKTY 403 Score = 35.5 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 21/59 (35%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ AV ++ + + A FP + + A+V G+ AA E Sbjct: 683 FDAAVALIQLKEWKTAATVLTGFRGLFPGHEMQPEVTRKLAYVYKEDGQLALAAGEYER 741 >gi|84999216|ref|XP_954329.1| hypothetical protein [Theileria annulata] gi|65305327|emb|CAI73652.1| hypothetical protein, conserved [Theileria annulata] Length = 1028 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 33/72 (45%), Gaps = 11/72 (15%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y++G +++A E+ I P ++N V ++VG Y ++++ + + S Sbjct: 703 YYNSGDFEKALEFLEKSIQLNPMNEN---VQFIVGCCYLKLLK--------FENAITPFS 751 Query: 164 RIVERYTNSPYV 175 R+V ++ Sbjct: 752 RVVSINPDNSDA 763 >gi|326913950|ref|XP_003203294.1| PREDICTED: dnaJ homolog subfamily C member 3-like [Meleagris gallopavo] Length = 499 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 38/297 (12%), Positives = 86/297 (28%), Gaps = 68/297 (22%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 L + +T + +Y +A+ +++++ A ++ + A Sbjct: 126 VLKSNPSNNEEKEAQTQLTKSDELQRLYSQALSAYQQEDYEAAIPLLDEILAVCVW--DA 183 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----VYYLVG----------- 138 L A G+ +A S + ++ Y +YY +G Sbjct: 184 DLRELR-AECYIKEGEPSKAISDLKAAAKLKSDNTEAFYKISRIYYQLGDHELSLSEVRE 242 Query: 139 -----------MSYAQMIRDVPYDQRATKL---------MLQYMSRIVERYTNSP-YVKG 177 S + ++ + + + + +++ + P Y Sbjct: 243 CLKLDQDHKQCFSLYKQVKKLNKQIESAEEFIREGRYEDAISKYDSVMKTEPDVPVYATR 302 Query: 178 ARFYVTVG--RNQLAAKEVEI------------------GRYYLKRGEYVAAIPRFQLVL 217 A+ + +NQ A + + + YL Y AI ++ Sbjct: 303 AKERICHCLSKNQQATEAITVCTQVLQLEPTNVNALKDRAEAYLLEDLYEEAIKDYETAQ 362 Query: 218 ANYSDAEHAEEAMAR----LVEA-----YVALALMDEAREVVSLIQERYPQGYWARY 265 AN + + E + R L ++ Y L + AR+ + R W Sbjct: 363 ANSENDQQIREGLERAQRMLKQSQKRDYYKILGVKRNARKQEIIKAYRKLASQWHPD 419 >gi|312890049|ref|ZP_07749593.1| Tetratricopeptide TPR_2 repeat protein [Mucilaginibacter paludis DSM 18603] gi|311297581|gb|EFQ74706.1| Tetratricopeptide TPR_2 repeat protein [Mucilaginibacter paludis DSM 18603] Length = 999 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 8/76 (10%) Query: 95 KSLLMS----AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 K L A + KY+ A + + ++ + ++K YYL GM Y Sbjct: 731 KYQLDMLWLCANAWFLDKKYENAIEMLDRFLNK-QQNKVNAEAYYLRGMCYYNTHNYKAS 789 Query: 151 DQ---RATKLMLQYMS 163 +Q A KL Q Sbjct: 790 NQDLNEAVKLSQQTFR 805 >gi|254474652|ref|ZP_05088038.1| tetratricopeptide TPR_2 [Ruegeria sp. R11] gi|214028895|gb|EEB69730.1| tetratricopeptide TPR_2 [Ruegeria sp. R11] Length = 285 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 14/115 (12%), Positives = 38/115 (33%), Gaps = 10/115 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-QQAAS 115 ++ ++ A L E ++ A E F + +P + + + G + A + Sbjct: 162 EQRDFDAAKAALDEGSYQAAAEQFVAFTLAYPGSPLTSAAEYHRGKALDGLGDTREAARA 221 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + + P + + +G + ++ T +S + R+ Sbjct: 222 YLAAF-SANPAGQTAPDALFELGAALGRL--------GQTSQACVTLSEVGGRFP 267 >gi|196000432|ref|XP_002110084.1| hypothetical protein TRIADDRAFT_53679 [Trichoplax adhaerens] gi|190588208|gb|EDV28250.1| hypothetical protein TRIADDRAFT_53679 [Trichoplax adhaerens] Length = 1330 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 74/231 (32%), Gaps = 60/231 (25%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 +L + + +A + + + P +A S GK+++A Sbjct: 408 NLGNAYLDQGKYEEAISMYEKSLKIRLSVLDHNHP--DIAV-SYNNMGEAYRHQGKHEEA 464 Query: 114 ASLGEEYITQ------YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 S+ E+ + + +V Y +G +Y Q + + Sbjct: 465 ISMYEQSLKIRLSVLGH-NHPDVAMSYNNLGNAY--------RHQSKHEEAI-------- 507 Query: 168 RYTNSPYVKGARFYV-TVGRNQ--LAAKEVEIGRYYLKRGEYVAAIP--------RFQLV 216 S Y K + + +G N +A +G Y +G+Y AI R ++ Sbjct: 508 ----SMYEKSLKITLPVLGHNHPDVAGSYSNMGAVYSNQGKYEEAISMNKKSLKIRLSVL 563 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEA--------REVVSLIQERYPQ 259 N+ D + + E Y +EA + +S++ +P Sbjct: 564 GHNHPDVAASY---NNMGEVYRHQGKHEEAISMYEKSLKITLSVLGHNHPD 611 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 78/239 (32%), Gaps = 71/239 (29%) Query: 60 VYEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFP-----FAGVARKSLLMSAFVQY 105 +Y + L + + +A + + + P + + A+ Sbjct: 657 LYNNMGAVNLDQGKYEEAISMYEKSLKITLSVLGHNHPDVAASYNNMGE------AYRY- 709 Query: 106 SAGKYQQAASLGEEYITQ------YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 GK+++A S+ E+ + + ++ Y +G +Y Q + + Sbjct: 710 -QGKHEEAISMYEKSLKITLSVLGH-NHPDIAGSYNNLGNAY--------RHQGKHEEAI 759 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVG-RNQ--LAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 S Y K + ++V N +A +G Y +G+Y AI ++ Sbjct: 760 ------------SMYEKSLKITLSVLGHNHPDVAGSYNNLGNAYSNQGKYEEAISMYEKS 807 Query: 217 LA--------NYSDAEHAEEAMARLVEAYVALALMDEA--------REVVSLIQERYPQ 259 L N+ D + + EAY +EA + +S++ +P Sbjct: 808 LKIRLSVLDHNHPDIAASY---NNMGEAYRHQGKREEAISMYEKSLKIRLSVLGHNHPD 863 >gi|113475191|ref|YP_721252.1| glycosyl transferase family protein [Trichodesmium erythraeum IMS101] gi|110166239|gb|ABG50779.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101] Length = 1737 Score = 41.6 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 16/119 (13%), Positives = 43/119 (36%), Gaps = 14/119 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + + +++ + KA + + P + ++ V GK+++ Sbjct: 8 NSETPTQYFQQGQQAVAAGQLEKAVTLYKKTIELNPNLALYQQ---NLGDVLAKIGKWEE 64 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 AA++ ++ I P S +S+ + +V Q + + S+ ++ N Sbjct: 65 AATVYQKAIELKPTS----------ALSHYNL-GNVQEKQGQLEQAIASYSQAIKINPN 112 Score = 38.9 bits (90), Expect = 0.65, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 29/144 (20%) Query: 61 YEKAVLFLKEQNFSKAYEYFN---QCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAAS 115 Y + + L+ + +A + + + P + +V ++++A S Sbjct: 222 YGETLAKLR--RWDEAIAAYRQAIKLEANSPVIYHQF--------GYVLTQKQQWEEAIS 271 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + I P S + VY+ +G D Q+ + + ++ E NSP Sbjct: 272 AYRQAIKIKPNSPD---VYHHLG--------DALTQQQNWEEAVGAYRKVTELQPNSP-- 318 Query: 176 KGARFYVTVGRNQLAAKEVEIGRY 199 Y +QL E I Y Sbjct: 319 -EVYHYFGYALSQLQQWEEAIVAY 341 >gi|281347136|gb|EFB22720.1| hypothetical protein PANDA_021839 [Ailuropoda melanoleuca] Length = 520 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 67/200 (33%), Gaps = 23/200 (11%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL 98 Q+S L +D + K ++ KA E++ D + +L Sbjct: 337 TQASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALY 392 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 + +A ++ + +N V Y + Y +++ D Sbjct: 393 NIGLTYKRLNRLDEALDC---FLKLHAILRNSAQVLYQIANVY-ELMEDPN-------QA 441 Query: 159 LQYMSRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLV 216 ++++ +++ +S A + + K + +YY + Y + I + + Sbjct: 442 IEWLMQLISVVPTDSR----ALSKLGELYDSEGDKS-QAFQYYYESYRYFPSNIEVIEWL 496 Query: 217 LANYSDAEHAEEAMARLVEA 236 A Y D + E+A+ A Sbjct: 497 GAYYIDTQFCEKAIQYFERA 516 >gi|124024538|ref|YP_001018845.1| hypothetical protein P9303_28501 [Prochlorococcus marinus str. MIT 9303] gi|123964824|gb|ABM79580.1| Hypothetical protein P9303_28501 [Prochlorococcus marinus str. MIT 9303] Length = 706 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 19/130 (14%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 N+ A FN+ P A + + +Y YQ A + + IT P+ Sbjct: 466 GNYQGAIADFNKAIEINP--QYAP-AYMNRGIAKYDLKDYQGAIADYSKAITINPQH--- 519 Query: 131 DYVYYLVGMSYAQMIRDVPYDQ-RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 +++ R DQ + + ++R +E A + +L Sbjct: 520 -------AIAFNN--RSNAKDQLGDHQGAISDLNRAIEINPQ---FADAFNNRGATKYEL 567 Query: 190 AAKEVEIGRY 199 + I Y Sbjct: 568 GDHQGAIADY 577 Score = 39.7 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 23/170 (13%), Positives = 50/170 (29%), Gaps = 27/170 (15%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + K +++ A +N+ P + L+ + G YQ A + + Sbjct: 355 NRGNAKKKLKDYQGAITDYNKAIEINPQHTGPFNNRGLVKK-----NLGDYQGAIADYNK 409 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I P+ Y YY G+ + + + ++ + + Sbjct: 410 AIELDPQH---AYAYYNRGIVKKNL--------GDYQGAIADYNKAIAINPQ---LAETY 455 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRG---EYVAA-IPR--FQLVLANYSDA 223 + L + I + +Y A + R + L +Y A Sbjct: 456 SNRGGIKRVLGNYQGAIADFNKAIEINPQYAPAYMNRGIAKYDLKDYQGA 505 >gi|328707547|ref|XP_003243427.1| PREDICTED: serine/threonine-protein phosphatase 5-like [Acyrthosiphon pisum] Length = 476 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 51/157 (32%), Gaps = 30/157 (19%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD--------FPFAG-VARKSLLMSAF 102 D+ + + E+A + + ++ A +Y+++ FA A +S F Sbjct: 12 ADITHAERMKEEANVHFSAKRYADAIDYYSKAIAMCESSSTKPHNFAAYYANRS-----F 66 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQ 160 Y A + + I P+ Y+ YY +Y + K L+ Sbjct: 67 AHSKTEAYGYALADASKAIQLDPK-----YLKGYYRRATAYMSL--------GKFKEALK 113 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLA-AKEVEI 196 +V+ N K +LA K + + Sbjct: 114 DYEVVVKALPNDKDAKVKYAECNKLVKRLAFEKAISV 150 >gi|291531589|emb|CBK97174.1| ABC-type transport system, involved in lipoprotein release, permease component [Eubacterium siraeum 70/3] Length = 1144 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 17/133 (12%), Positives = 39/133 (29%), Gaps = 34/133 (25%) Query: 61 YEKAVLFLKEQ--NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAASL 116 YE ++ ++ + + A K+ + + QY++G KY + Sbjct: 476 YEDGKKQYEDGYSQYTSGLAQYESAKAQY----DAGKAQYDAGYAQYASGKAKYDSGKAE 531 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 ++ +Y Y G+ + + A + Sbjct: 532 YDK-----------NYADYEKGLKEYNEGKTAL--ETAKTDADKQF-------------A 565 Query: 177 GARFYVTVGRNQL 189 A+ + GR +L Sbjct: 566 DAQKKIDDGREKL 578 >gi|281356693|ref|ZP_06243184.1| TPR repeat-containing protein [Victivallis vadensis ATCC BAA-548] gi|281316820|gb|EFB00843.1| TPR repeat-containing protein [Victivallis vadensis ATCC BAA-548] Length = 837 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 74/203 (36%), Gaps = 26/203 (12%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A+L K + ++A + + P + + ++L +A + +Y A E+ Sbjct: 472 RALLLEKAGHSAEARSEYLKFLVAHPDSEYSPRALFSAAELAMELREYPAAVREFFEFAE 531 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + P+S + Y A + T+ ++ + ++Y SP V +R Sbjct: 532 KNPKSDSAPAALYQ-----AMQSGYFARNAAETRRAIELLE---KKYPESPVVIESR--- 580 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA---MARLVEAYVA 239 +++ Y ++ +Y A+ + V Y A+ E A + Sbjct: 581 -----------LQLADYLIRDADYDGALAQLAEV-EKYPAAKSPETASELLYDHARIARL 628 Query: 240 LALMDEAREVVSLIQERYPQGYW 262 ++A + + + + +P + Sbjct: 629 QRQDEDALKFLEQLLKEHPSNAF 651 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 25/201 (12%), Positives = 62/201 (30%), Gaps = 25/201 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +E+NF +A + + A + +Y++A + E Sbjct: 399 YLFGEYSFREKNFRQAANLLKTVADS--GSNRADAARYRLLQSLVELKRYKEAEPVAEA- 455 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + + P + + + + + + + + +S Y A Sbjct: 456 LRRSPVQTHATSADFYRALLLEKA--------GHSAEARSEYLKFLVAHPDSEYSPRAL- 506 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 ++ EY AA+ F ++ A A+ + +++ Sbjct: 507 -------------FSAAELAMELREYPAAVREFFEFAEKNPKSDSAPAALYQAMQSGYFA 553 Query: 241 ALMDEAREVVSLIQERYPQGY 261 E R + L++++YP+ Sbjct: 554 RNAAETRRAIELLEKKYPESP 574 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 18/136 (13%), Positives = 49/136 (36%), Gaps = 6/136 (4%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + +Y+ +N ++ + +P + V +S L A Sbjct: 528 EFAEKNPKSDSAPAALYQAMQSGYFARNAAETRRAIELLEKKYPESPVVIESRLQLADYL 587 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y A + E + +YP +K+ + L+ + QR + L+++ + Sbjct: 588 IRDADYDGALAQLAE-VEKYPAAKSPETASELL-----YDHARIARLQRQDEDALKFLEQ 641 Query: 165 IVERYTNSPYVKGARF 180 +++ + ++ + A Sbjct: 642 LLKEHPSNAFGAEAAL 657 Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 75/234 (32%), Gaps = 33/234 (14%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + Y + + +Y+ A + ++ A ++ Q ++ P ++ L + ++ Sbjct: 604 EKYPAAKSPETASELLYDHARIARLQRQDEDALKFLEQLLKEHPSNAFGAEAALSAGNLK 663 Query: 105 YSAGKYQQAASLGEEYITQYPESKN-------VDYVYYLVGMSYAQMIRDVPYDQRAT-- 155 G Y++A E +T P +N + Y YA+ + DQ A Sbjct: 664 ADQGNYREALKFYERALTLGPAGRNAELTRGRIADARY---NIYAETLDKNDLDQAAAIY 720 Query: 156 -KLML-----QYMSRIVERYTNS-------PYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 +L Q M + + +Y A + L + + + Sbjct: 721 RELADGSGNPQVMLQSLYKYGKCCELMDEREDALRAYEKLLYLAGDLQRRGIAPDPVWTS 780 Query: 203 RGEYVAAIPRFQLVLANYSDAEH-AEEAMARLVEAYVALALMDEAREVVSLIQE 255 RG Y A + + A A+ + Y L L + + QE Sbjct: 781 RGAYQAVLLNLKD------GTPASARRALED-IRLYEELKLTGAGEDFARIKQE 827 >gi|67922166|ref|ZP_00515681.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] gi|67856066|gb|EAM51310.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] Length = 270 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 37/244 (15%), Positives = 73/244 (29%), Gaps = 73/244 (29%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 + G ++D + + + + +KA+ + NF++A Y+ Q FP Sbjct: 16 TSVTGTGLAQTQDNPPLTEEQLEEGQSIAKKAIAATENGNFAQAETYWTQLVETFPSNPA 75 Query: 93 A---------RKSLLMSAFVQYS----------------------AGKYQQAASLGEEYI 121 A ++ L +A ++ GKY +A + + Sbjct: 76 AWSNRGNARVSQNKLEAAIADFNQAIELAPEAADPYLNRGTALEAQGKYDEAIADYNRVL 135 Query: 122 TQYPESKNVDYVYYLVG------------MSYAQMIRDVP--------------YDQRAT 155 P+ Y G ++ + ++ Y T Sbjct: 136 ELNPDD---AMAYNNRGNAKSGEGEWEQALTDYRKASEIAPNFAFARANAALVYYQIGKT 192 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI---PR 212 ++ M +V +Y P V+ A V Q E +VAA+ R Sbjct: 193 GEAVKEMRNLVRKYPMFPDVRAALTAVLWNIGQQGEAE----------SHWVAAVGMDNR 242 Query: 213 FQLV 216 +Q + Sbjct: 243 YQDL 246 >gi|223939093|ref|ZP_03630977.1| TPR repeat-containing protein [bacterium Ellin514] gi|223892253|gb|EEF58730.1| TPR repeat-containing protein [bacterium Ellin514] Length = 280 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 5/70 (7%), Positives = 23/70 (32%), Gaps = 3/70 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +E+A ++ + +A ++++ + + + ++ A + + Sbjct: 51 FEQANKCYEQGKYGEAVSHYDKLLQR---GEASEAIYFNLGNAYFKLNQFGHAIASYRQA 107 Query: 121 ITQYPESKNV 130 P + Sbjct: 108 EQLAPRDPEL 117 >gi|114771184|ref|ZP_01448604.1| hypothetical protein OM2255_07505 [alpha proteobacterium HTCC2255] gi|114548109|gb|EAU50996.1| hypothetical protein OM2255_07505 [alpha proteobacterium HTCC2255] Length = 508 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 10/126 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG-EE 119 Y+ A++ L E NF A F+ P + + +++ A E Sbjct: 389 YQTALMPLNENNFELAIIQFDSLINVIPSGPLLTAAHYSKGDAFSELEEWKAAGKSYLES 448 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P+ K VG+S +M + ++R+ R+ + V+ A+ Sbjct: 449 F-KLEPDGKYAAKALMNVGISLGKMQK--------INEACNILNRVEARFPRNQIVEEAQ 499 Query: 180 FYVTVG 185 + + + Sbjct: 500 YEMQIL 505 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 82/287 (28%), Gaps = 74/287 (25%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--------- 91 S + ++ Y+ A+ L E N+ A F++ + FP Sbjct: 215 GGSVKTSNTNAELAITEKSNYDNALKLLNENNYELALLEFDKLIKAFPNGPLTVAAHYSK 274 Query: 92 ----------------------------VARKSLLMSAFV---QYSAGKYQQAASLGEEY 120 A+K+L S +Q A ++ Sbjct: 275 GDAFIGLTAWDQGVNSYLESFSLEPNGKYAQKALKSSYDASLELLKQNDFQVALIQFDKL 334 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I + + VYY G D + K L+ + E ++ Y A Sbjct: 335 IDITSDDTFLAGVYYSRG--------DAFTGMQDWKSALRSYLKSYELESDGNYAAKALK 386 Query: 181 --------------------YVTVGRNQLAAKEVEIGRYYLKRGE------YVAAIPRFQ 214 N + + + +Y K + AA + Sbjct: 387 ASYQTALMPLNENNFELAIIQFDSLINVIPSGPLLTAAHYSKGDAFSELEEWKAAGKSYL 446 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 D ++A +A+ + + + ++EA +++ ++ R+P+ Sbjct: 447 ESFKLEPDGKYAAKALMNVGISLGKMQKINEACNILNRVEARFPRNQ 493 >gi|90023205|ref|YP_529032.1| hypothetical protein Sde_3565 [Saccharophagus degradans 2-40] gi|89952805|gb|ABD82820.1| TPR repeat [Saccharophagus degradans 2-40] Length = 222 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 20/160 (12%), Positives = 44/160 (27%), Gaps = 39/160 (24%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQR---------------------EVYEKAVLFLKEQN 72 + G S+ + + + + A +KE+ Sbjct: 22 VVAGCTSSPSKKDEAEQAATAEGEETPFVLIPSPYQPKGSAPSQAKKEFAAAQTAMKEKQ 81 Query: 73 FSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + +A + +P + V +Y++A E I P N+ Sbjct: 82 WQQAENILLLMTETYPELSGPY-----VNLGIVYLQTKRYEEAVKALEFAIETNPT--NM 134 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 D Y +G++Y +Q + +E + Sbjct: 135 D-AYSQLGLAY--------REQGLFEQADMAYQSALEVWP 165 >gi|84385371|ref|ZP_00988403.1| hypothetical protein V12B01_16911 [Vibrio splendidus 12B01] gi|84379968|gb|EAP96819.1| hypothetical protein V12B01_16911 [Vibrio splendidus 12B01] Length = 656 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 21/71 (29%), Gaps = 11/71 (15%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 K + K +F A + S + A Q GKY QA + + Sbjct: 373 KGIAQYKAGDFEAAEQTLQDLS--------GEDARYNLANAQAKQGKYDQAIKEYQRILE 424 Query: 123 QYPESKNVDYV 133 PE Y Sbjct: 425 SNPEH---AYA 432 >gi|311269779|ref|XP_003132635.1| PREDICTED: prolyl 3-hydroxylase 2-like [Sus scrofa] Length = 672 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P+ ++V L + Y + I D D + + Sbjct: 278 FAYYRVGEYVKALECAKAYLLIHPDDEDV-----LDNVDYYESILDDSIDPGSI-EARED 331 Query: 162 MSRIVERY 169 + V+R+ Sbjct: 332 LMMFVKRH 339 >gi|261404029|ref|YP_003240270.1| tetratricopeptide repeat-containing protein [Paenibacillus sp. Y412MC10] gi|261280492|gb|ACX62463.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus sp. Y412MC10] Length = 581 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 72/203 (35%), Gaps = 29/203 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +++AV L + KA +YF + P V A + G Y+ + + Sbjct: 28 FDRAVRSLDRYQYDKALKYFRKAVEYEPDNPVNH---CNMAGILSETGDYKASNDVLAHI 84 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + Q + Y+ + +YA M + + + +E N ++ A Sbjct: 85 LEQ--VDPLMTECYFYMANNYANM--------EQFEKAEEALVTYLEEDPNGQFLDEAEE 134 Query: 181 YVTVGR---------NQLAAKEVEI----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 + + N++ ++E + R L+ G++ A+ + ++ + D Sbjct: 135 MMELLHYELNRPAKLNRIKSREGVVEHEHARALLEEGKFAQAVKLLEEIVKDNPDFLA-- 192 Query: 228 EAMARLVEAYVALALMDEAREVV 250 A L AY + D A+ + Sbjct: 193 -ARNNLALAYYYMGRFDTAKRTI 214 >gi|170727074|ref|YP_001761100.1| tol-pal system protein YbgF [Shewanella woodyi ATCC 51908] gi|169812421|gb|ACA87005.1| tol-pal system protein YbgF [Shewanella woodyi ATCC 51908] Length = 243 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 50/130 (38%), Gaps = 17/130 (13%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL--- 116 YE+A+ LK++ + +A F+ ++++P + + + + Y+ G++ A Sbjct: 126 YEQALNLVLKQKRYDEAIPAFSAFTKNYPNSTYSANANYWLGQLLYNKGEFTSAKEAFST 185 Query: 117 -GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + + + MI + + K Y R+++ Y NS Sbjct: 186 VVDRFKESNKRGDS---------LVKLGMIAEKTGVPSSAK---SYYQRVLKEYANSAAA 233 Query: 176 KGARFYVTVG 185 + A+ + Sbjct: 234 RIAQQQLNAL 243 Score = 37.8 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 36/124 (29%), Gaps = 22/124 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +Y +A + YP S Y +G + S + Sbjct: 135 KQKRYDEAIPAFSAFTKNYPNSTYSANANYWLGQLLYNK--------GEFTSAKEAFSTV 186 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V+R+ S + + + K G +A +Q VL Y+++ Sbjct: 187 VDRFKESNKRGDSLVKLGMIAE--------------KTGVPSSAKSYYQRVLKEYANSAA 232 Query: 226 AEEA 229 A A Sbjct: 233 ARIA 236 >gi|149923636|ref|ZP_01912033.1| hypothetical protein PPSIR1_22456 [Plesiocystis pacifica SIR-1] gi|149815503|gb|EDM75039.1| hypothetical protein PPSIR1_22456 [Plesiocystis pacifica SIR-1] Length = 449 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 14/111 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +K++++ + D V K L F Y G A S + Sbjct: 87 NAGRRAVKKKDYDEGIVLLRGALEAD----PVNPKVLGELGFAAYKKGDLALAESSTKRA 142 Query: 121 ITQY-PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 I Q P +++ +YY +G+ + D+ A +R +E Sbjct: 143 IDQAPPGHESLGALYYNLGLI------EEARDEPA--KAKAAFARSLEARP 185 >gi|329942390|ref|ZP_08291200.1| tetratricopeptide repeat family protein [Chlamydophila psittaci Cal10] gi|332287031|ref|YP_004421932.1| putative tetratricopeptide repeat protein [Chlamydophila psittaci 6BC] gi|313847628|emb|CBY16616.1| putative lipoprotein [Chlamydophila psittaci RD1] gi|325507126|gb|ADZ18764.1| putative tetratricopeptide repeat protein [Chlamydophila psittaci 6BC] gi|328815300|gb|EGF85288.1| tetratricopeptide repeat family protein [Chlamydophila psittaci Cal10] gi|328914263|gb|AEB55096.1| TPR domain protein [Chlamydophila psittaci 6BC] Length = 318 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 53/152 (34%) Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 A +++ FP + ++L + + + +A ++ Q+ + Sbjct: 152 DALRIYDEILTAFPNKDLGAQALYLKGDLLVTKKDLPEAIKTFKKLTLQFSAHPLSPKSF 211 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 + Y + P++ + L I +++ N P V + A+ Sbjct: 212 VRLSEIYLMQAQKEPHNLQYLNLAKINEEAIGKQHPNHPLNSVVAANVRAMCERYASGLY 271 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 GR+Y K+ + AA + + NY ++ Sbjct: 272 STGRFYEKKKKPHAASIYYATAIENYPESSLV 303 >gi|260900752|ref|ZP_05909147.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AQ4037] gi|308110196|gb|EFO47736.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AQ4037] Length = 251 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + + Y +S Y A +G+ Y Sbjct: 137 YQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYS--------------ANSHYWLGQLYF 182 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A+ F V+ +Y D+ +A+ +L E +A++ + + YP Sbjct: 183 AKKQDKDAVKSFAAVV-SYKDSNKRADALLKLGEIAERNNNAAQAKKYYQQVVDEYPGSA 241 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 242 SAKLAGSKLK 251 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 23/124 (18%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A + +++ YP+S +Y +G Y +D K ++ + + Sbjct: 146 KKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKKQD--------KDAVKSFAAV 197 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V Y +S A + A + + A +Q V+ Y + Sbjct: 198 VS-YKDSNKRADALLKLGEI----AERNNNAAQ----------AKKYYQQVVDEYPGSAS 242 Query: 226 AEEA 229 A+ A Sbjct: 243 AKLA 246 Score = 35.1 bits (80), Expect = 9.8, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 52/148 (35%), Gaps = 16/148 (10%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +++ T ++ Y+ AV LK+++++ A F Q +D+P + + S Sbjct: 116 KETKPTETSGKYTPNVDEQTAYQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYSANSHY 175 Query: 99 MSAFVQY---SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + + ++ + Y +K D + ++ + A Sbjct: 176 WLGQLYFAKKQDKDAVKSFAAVVSYKD---SNKRAD--------ALLKLGEIAERNNNAA 224 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVT 183 +Y ++V+ Y S K A + Sbjct: 225 -QAKKYYQQVVDEYPGSASAKLAGSKLK 251 >gi|188990359|ref|YP_001902369.1| hypothetical protein xccb100_0963 [Xanthomonas campestris pv. campestris str. B100] gi|167732119|emb|CAP50311.1| putative membrane protein [Xanthomonas campestris pv. campestris] Length = 603 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 15/117 (12%), Positives = 36/117 (30%), Gaps = 9/117 (7%) Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLD-SVTDVRYQREVYEKAVLFLK 69 +F A L F + VG + ++ + Q++ + V + Sbjct: 311 LFPVMALALLAFRRRAAVMVLALLCVGPFVEPAQAAEGTLWQRADQVQQQRLDAGVQAYR 370 Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 + +F+ A + F + G+Y A + + + + P+ Sbjct: 371 KGDFAAAQKAFEAVP--------TDQGWYNLGNALARQGRYDDAIAAYDRALRRQPQ 419 >gi|126451956|ref|YP_001066323.1| TPR repeat-containing protein [Burkholderia pseudomallei 1106a] gi|134277247|ref|ZP_01763962.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305] gi|126225598|gb|ABN89138.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106a] gi|134250897|gb|EBA50976.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305] Length = 1454 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A L L +F +A F + P A +S + + A + + + Sbjct: 909 RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 965 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + ++ ++Y Sbjct: 966 LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 997 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 +LA+ G Y Y A++ R + H EA+ L Sbjct: 998 VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 1051 Query: 240 LALMDEAREVVS 251 + + E+ EV+ Sbjct: 1052 VDRLAESEEVLR 1063 >gi|23296072|gb|AAN12289.1| hypothetical protein [Aquifex pyrophilus] Length = 233 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 27/136 (19%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y + +A +I +YP++ D Y+ +G Y ++ + LQ + Sbjct: 118 YKMKRLNEARDAFVNFIKKYPKTNLTDNAYFWLGTIYYEL--------GNEERALQILKT 169 Query: 165 IV-----ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 ++ R + + + + + E E RY + R + Sbjct: 170 LIGKCKEGRLPDCNKLPDTYYMLVKIYAE-EGNESEAERY----------LNRLK---EE 215 Query: 220 YSDAEHAEEAMARLVE 235 + D E+A L + Sbjct: 216 FPDTPLIEKAEKVLYK 231 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 35/119 (29%), Gaps = 19/119 (15%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 +++Y + A F++ Y + G A+ + + Sbjct: 125 EARDAFVNFIKKYPKTNLTDNAYFWLGTI--------------YYELGNEERALQILKTL 170 Query: 217 LAN-----YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + D + LV+ Y EA ++ ++E +P E ++ Sbjct: 171 IGKCKEGRLPDCNKLPDTYYMLVKIYAEEGNESEAERYLNRLKEEFPDTPLIEKAEKVL 229 >gi|307178712|gb|EFN67326.1| RNA polymerase-associated protein CTR9-like protein [Camponotus floridanus] Length = 1264 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 24/141 (17%) Query: 133 VYYLVGM------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179 Y L+ + + Q +D ++R L +++ + + + Sbjct: 600 AYSLIALGNIWLQTLHQSGKDKEREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHK 659 Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 V R+ A +E + I Y+++ ++V+AI ++ L + H E Sbjct: 660 GCVNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYRYHHV-EV 718 Query: 230 MARLVEAYVALALMDEAREVV 250 + L AY + EA+ + Sbjct: 719 LQYLGRAYFKAGKLKEAKLTL 739 >gi|197122252|ref|YP_002134203.1| hypothetical protein AnaeK_1846 [Anaeromyxobacter sp. K] gi|196172101|gb|ACG73074.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. K] Length = 695 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 43/136 (31%), Gaps = 29/136 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + L+ NF+ A E + + P + A + A G A + + ++ Sbjct: 32 ARGRANLRIGNFAAAVEAYRKALAGNPGSREASRG---VALALLQNGDTDLAVAELDRHL 88 Query: 122 TQYPESKNVD-----------YVY-------YLV-GMS-------YAQMIRDVPYDQRAT 155 ++P+ + Y Y YL G++ ++ R + D+ Sbjct: 89 ARFPDDAELAFRQAGLLQWSRYAYRSKDAVRYLRMGLAVRDDPARRRELARLLARDRGTL 148 Query: 156 KLMLQYMSRIVERYTN 171 L R++ Sbjct: 149 GEALAEYDRLLAAAPE 164 >gi|167763112|ref|ZP_02435239.1| hypothetical protein BACSTE_01481 [Bacteroides stercoris ATCC 43183] gi|167699452|gb|EDS16031.1| hypothetical protein BACSTE_01481 [Bacteroides stercoris ATCC 43183] Length = 278 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 7/69 (10%), Positives = 19/69 (27%), Gaps = 4/69 (5%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + +++ A + + + A Y A +A E + Sbjct: 54 AQGDSAYMRNDYASAIQIYESLLKK---GEAAE-VYYNLGNSYYKADDIAKAILNYERAL 109 Query: 122 TQYPESKNV 130 P + ++ Sbjct: 110 LLQPGNADI 118 >gi|328473191|gb|EGF44039.1| hypothetical protein VP10329_20975 [Vibrio parahaemolyticus 10329] Length = 251 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + + Y +S Y A +G+ Y Sbjct: 137 YQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYS--------------ANSHYWLGQLYF 182 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A+ F V+ +Y D+ +A+ +L E +A++ + + YP Sbjct: 183 AKKQDKDAVKSFAAVV-SYKDSNKRADALLKLGEIAERNNNAAQAKKYYQQVVDEYPGSA 241 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 242 SAKLAGSKLK 251 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 23/124 (18%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A + +++ YP+S +Y +G Y +D K ++ + + Sbjct: 146 KKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKKQD--------KDAVKSFAAV 197 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V Y +S A + A + + A +Q V+ Y + Sbjct: 198 VS-YKDSNKRADALLKLGEI----AERNNNAAQ----------AKKYYQQVVDEYPGSAS 242 Query: 226 AEEA 229 A+ A Sbjct: 243 AKLA 246 Score = 35.1 bits (80), Expect = 9.8, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 52/148 (35%), Gaps = 16/148 (10%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +++ T ++ Y+ AV LK+++++ A F Q +D+P + + S Sbjct: 116 KETKPTETSGKYTPNVDEQTAYQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYSANSHY 175 Query: 99 MSAFVQY---SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + + ++ + Y +K D + ++ + A Sbjct: 176 WLGQLYFAKKQDKDAVKSFAAVVSYKD---SNKRAD--------ALLKLGEIAERNNNAA 224 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVT 183 +Y ++V+ Y S K A + Sbjct: 225 -QAKKYYQQVVDEYPGSASAKLAGSKLK 251 >gi|283851178|ref|ZP_06368461.1| Peptidoglycan-binding LysM [Desulfovibrio sp. FW1012B] gi|283573347|gb|EFC21324.1| Peptidoglycan-binding LysM [Desulfovibrio sp. FW1012B] Length = 447 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 24/136 (17%) Query: 39 ERQSSRDVYLDSVTDVRYQREV------YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 +++R ++ + RE+ +EK + K+ F KA E F++ + P Sbjct: 276 PSKTARASEPEAPPAMPESREMADAESSFEKGIELGKQNKFQKAVESFDKAIKLNP---- 331 Query: 93 ARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 ++ Y +Y +A + I + P N Y + G+SY + R Sbjct: 332 -NRADYFASRGHANYYMKQYPKAIDDYTKAIEKNP---NFALAYSMRGLSYTRSGRYP-- 385 Query: 151 DQRATKLMLQYMSRIV 166 + ++ + Sbjct: 386 ------QAIDDFNKAI 395 >gi|296123749|ref|YP_003631527.1| hypothetical protein Plim_3515 [Planctomyces limnophilus DSM 3776] gi|296016089|gb|ADG69328.1| Tetratricopeptide TPR_4 [Planctomyces limnophilus DSM 3776] Length = 1009 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 73/211 (34%), Gaps = 44/211 (20%) Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIR 146 + + S +A+S E++ +YP + Y + S A++IR Sbjct: 799 GTYIPDAGIDSIRAV-----QIEASSRLTEFLARYPNDPSEVQAMYQLARSQREQARLIR 853 Query: 147 DVPYDQ--RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN----------------- 187 + A KL L +I++ + + + R+ Sbjct: 854 NALKSPLAEAVKLRLAEQQKILD--------EQSLDNLVKLRDTLNKQANQTGLNTLHEA 905 Query: 188 QLAAKEVEIGR--YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 LA ++G + L+R + AI + + Y + A ++ EAY + E Sbjct: 906 ILANTAFDVGHQLFELRRDK--DAIMAYNTAINRYRNNPQVLSAFLQMAEAYRRMGKPAE 963 Query: 246 AR---EVVSLI--QERYPQGYWARYVETLVK 271 AR E +I Q++ P + +L + Sbjct: 964 ARSMLEQGRVILRQKQIPDSAFDNLGSSLTR 994 >gi|167918851|ref|ZP_02505942.1| hypothetical protein BpseBC_09870 [Burkholderia pseudomallei BCC215] Length = 1451 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A L L +F +A F + P A +S + + A + + + Sbjct: 906 RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 962 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + ++ ++Y Sbjct: 963 LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 994 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 +LA+ G Y Y A++ R + H EA+ L Sbjct: 995 VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 1048 Query: 240 LALMDEAREVVS 251 + + E+ EV+ Sbjct: 1049 VDRLAESEEVLR 1060 >gi|167815662|ref|ZP_02447342.1| hypothetical protein Bpse9_10994 [Burkholderia pseudomallei 91] gi|226197223|ref|ZP_03792800.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pakistan 9] gi|225930602|gb|EEH26612.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pakistan 9] Length = 1451 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A L L +F +A F + P A +S + + A + + + Sbjct: 906 RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 962 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + ++ ++Y Sbjct: 963 LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 994 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 +LA+ G Y Y A++ R + H EA+ L Sbjct: 995 VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 1048 Query: 240 LALMDEAREVVS 251 + + E+ EV+ Sbjct: 1049 VDRLAESEEVLR 1060 >gi|159468488|ref|XP_001692406.1| flagellar associated protein [Chlamydomonas reinhardtii] gi|158278119|gb|EDP03884.1| flagellar associated protein [Chlamydomonas reinhardtii] Length = 647 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 9/86 (10%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + + +Y + +Y +KEQ F++A ++ ++ P + R +L + + Y G+ Sbjct: 10 PIAEGQYTQTIY----TLIKEQKFAEAIQHLQYQLQNVPES---RAALSLLGYCYYYTGQ 62 Query: 110 YQQAASLGEEYITQYPESKNVDYVYY 135 Y A+ + E+ +T YP ++ DY Y Sbjct: 63 YDMASQMYEQLVTLYPSNE--DYKLY 86 Score = 35.5 bits (81), Expect = 8.3, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 5/73 (6%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 +K ++ AI Q L N ++ A++ L Y D A ++ + YP Sbjct: 24 IKEQKFAEAIQHLQYQLQNVPESRA---ALSLLGYCYYYTGQYDMASQMYEQLVTLYPSN 80 Query: 261 YWAR--YVETLVK 271 + Y ++L K Sbjct: 81 EDYKLYYAQSLYK 93 >gi|148654221|ref|YP_001274426.1| protein-glutamate O-methyltransferase [Roseiflexus sp. RS-1] gi|148566331|gb|ABQ88476.1| Protein-glutamate O-methyltransferase [Roseiflexus sp. RS-1] Length = 490 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 57/172 (33%), Gaps = 23/172 (13%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 T + ++A L A E P + +A ++L + A V + G Sbjct: 320 PKPTSSNADADHLDRAQALLDAGRLDDAMEVLRTIP---PNSSLAPRALTLVARVHANRG 376 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + A + + D Y L+G Y + Q +Q + R Sbjct: 377 ELDLAIAEVRRALEI---DALRDDAYLLLGTMYVR--------QGQWHDAIQSLERARYL 425 Query: 169 YTNSPYVKG--ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++ V A Y G+ +LAA+E L++ A R + +L Sbjct: 426 NPDAALVSYHLAMAYRQAGKKELAAREFRSA---LRK----LAAYRAEDLLE 470 >gi|317502927|ref|ZP_07961022.1| viral beta C/D like family protein [Prevotella salivae DSM 15606] gi|315665961|gb|EFV05533.1| viral beta C/D like family protein [Prevotella salivae DSM 15606] Length = 348 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 18/139 (12%), Positives = 44/139 (31%), Gaps = 22/139 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFN-QCSRDF--PFAGVARKSLLMSAFVQYS-----AGKYQQ 112 Y A ++ + A + + + + F A ++ + S + Sbjct: 84 YHDAQSSKEQSEYEYAMKSTDPAVLQAYLDTFTD-APEAHIDSIQAHLLMLQQGDKDWSN 142 Query: 113 AA-----SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 A S E YI +P+S + + I + + +T + + ++ Sbjct: 143 ALVSNSKSAFEAYIANHPDSPHKAEAEH--------KIDSIDWATVSTTNTVDAYNTYLQ 194 Query: 168 RYTNSPYVKGARFYVTVGR 186 + N +V A+ + Sbjct: 195 DHPNGEHVDEAKDGIKQVN 213 >gi|296192058|ref|XP_002743902.1| PREDICTED: tetratricopeptide repeat protein 38-like isoform 1 [Callithrix jacchus] Length = 468 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 46/147 (31%), Gaps = 29/147 (19%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYEYFN 81 L+G D LD + +++ AV + NF KA E + Sbjct: 73 GLVLIGTGSSVKLDKELDLAVKTMVEISRTQPLTRREQLHVSAVETFAKGNFPKACELWE 132 Query: 82 QCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYY 135 Q +D P M A + G +Q YP + ++ Y Sbjct: 133 QILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPLSSY 181 Query: 136 LVGMSYAQMIRDVPYDQ--RATKLMLQ 160 + G+ ++ YDQ + + L Sbjct: 182 VKGIYSFGLMETNFYDQAKKLAREALS 208 >gi|254412704|ref|ZP_05026477.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] gi|196180439|gb|EDX75430.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] Length = 501 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 81/263 (30%), Gaps = 55/263 (20%) Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE---------VY 61 E + + + L ++ V LVG + +V+ + Q + + Sbjct: 10 ETELLSVTMTRTRLFSQLTLTVITLVGLTVTLPPRINPLAVSPIFAQTQNTSKAEADRLL 69 Query: 62 EKAVLFLKEQNFSKAYEY-------FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + + + F +A E F + KSL YS +Y++A Sbjct: 70 IQGLQQFQRRQFREAIESWQKSLSIFQEIGDR----QGVAKSLTNLGIAYYSLSQYEKAI 125 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 Y +S Q I DQ L + + Y+ S Y Sbjct: 126 E------------------LYQQSLSIFQEIG----DQLGVADSLNNLG--IAYYSLSQY 161 Query: 175 VKGARFY------VTVGRNQL--AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS---DA 223 K Y +QL A G Y +Y AI FQ L + D Sbjct: 162 EKAIELYQQSLSIFQEIGDQLGVADSLNNFGNVYYSLSQYKKAIELFQQALPIFQEIGDR 221 Query: 224 EHAEEAMARLVEAYVALALMDEA 246 +++ L AY L+ ++A Sbjct: 222 RGVADSLNNLGNAYNNLSQYEKA 244 >gi|193214013|ref|YP_001995212.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193087490|gb|ACF12765.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC 35110] Length = 740 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 29/79 (36%), Gaps = 1/79 (1%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA-GKYQ 111 + ++ +Y A+ L+ + +P + + K LL F+ + + Sbjct: 578 ENAPEQILYTNAIQTLENSQADTSLAMLKTLLSRYPNSALIPKVLLGIGFIYENNLSEPD 637 Query: 112 QAASLGEEYITQYPESKNV 130 A ++ YP+S+ Sbjct: 638 SAILAYQKLAADYPKSEEA 656 Score = 37.8 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 15/132 (11%) Query: 62 EKAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + ++ A + F + F + + L +A+ Q + +A L Sbjct: 260 NTGIALREQSRARLAIKIFQDLLADDNNLENFGEI--RFELATAYAQ--NDELGKAFDLY 315 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 +E I ++P ++ +Y +G ++ +D+ Y K Sbjct: 316 QEIIYRHPGTEAAAKSFYQLGKLRMEISQDLTM-------AKTLFDSAKAAYPKGDIAKK 368 Query: 178 ARFYVTVGRNQL 189 A+ T +N L Sbjct: 369 AQEQSTTLKNLL 380 >gi|189054119|dbj|BAG36639.1| unnamed protein product [Homo sapiens] Length = 459 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 46/146 (31%), Gaps = 30/146 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109 E+ ++ KE + +A + + + A+K+ L A Sbjct: 275 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQA 334 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + +L ++++ Y Sbjct: 335 FSAAIESCNKALELDSNNEKG---LFRRGEAHLTVND--------FELARADFQKVLQLY 383 Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191 N+ A+ + V R QLA Sbjct: 384 PNNK---AAKTQLAVCQQRIRRQLAR 406 >gi|167761625|ref|ZP_02433752.1| hypothetical protein CLOSCI_04037 [Clostridium scindens ATCC 35704] gi|167660768|gb|EDS04898.1| hypothetical protein CLOSCI_04037 [Clostridium scindens ATCC 35704] Length = 174 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 68/223 (30%), Gaps = 58/223 (26%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + A L G + S EK V +L++ + +A E Sbjct: 1 MKYMKIALSVMAAAIVLTGCVKNPS------------------EKGVEYLEDGKYKEAIE 42 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQ-------YSAGKYQQAASLGEEYITQYPESKNVD 131 F A S + + + Y+ A + + +K Sbjct: 43 QFQD----------AIDSEVNAGDAYRGIGIAKWEQEDYEGAKEAFQNALDN--GAKKTG 90 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 +Y +G ++ R + L Y + + +S + + Sbjct: 91 TIYNFMGNCDMKLSR--------PESALNYFRLGIGQEDSSE---ELKKEMHF------- 132 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 + + Y + ++ +A + + LA Y D E A++ + L Sbjct: 133 -NMIVA--YEQMKDWESAKAKLKEYLAEYPDDEAAKKELEFLE 172 >gi|67923943|ref|ZP_00517398.1| TPR repeat [Crocosphaera watsonii WH 8501] gi|67854211|gb|EAM49515.1| TPR repeat [Crocosphaera watsonii WH 8501] Length = 656 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 61/184 (33%), Gaps = 30/184 (16%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-----SLLMSAFVQYSAGKYQQAASLG 117 +A+++L+ +N+ A ++ + + + L + A YQ A Sbjct: 353 RAIVYLEMKNYEAALTDLSKIIELGKNSQETEEFVVVFAYLQRGKLYQQAKNYQGAIEDF 412 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP--YV 175 I P S VY G+SYAQ+ + ++ S +++ + Y Sbjct: 413 SSLIKLQPNSPESVEVYGRRGLSYAQL--------KNYPAAIEDFSSLIKSQPKNHQGYT 464 Query: 176 KGARFYVTVGRNQLAAKE----VEIG----RYYLKR-------GEYVAAIPRFQLVLANY 220 R Y+ + A K+ V I Y R Y AAI ++ Sbjct: 465 YRCRVYIELKDYNQAMKDCNQAVAIAPNNPEVYFARAGVHSGLKNYSAAIKDADKIIEIA 524 Query: 221 SDAE 224 D Sbjct: 525 PDFP 528 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 74/216 (34%), Gaps = 46/216 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASL 116 +AV++ + +++ A + F++ +A + + + V Y+ A + Sbjct: 318 SRAVIYQQVKDYEAAIKDFSK--------AIAIQPEFIRIYGRRAIVYLEMKNYEAALTD 369 Query: 117 GEEYITQYPESKNVD-----YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + I S+ + + Y G Y Q + + ++ S +++ N Sbjct: 370 LSKIIELGKNSQETEEFVVVFAYLQRGKLYQQA--------KNYQGAIEDFSSLIKLQPN 421 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 SP GR L+ Y + Y AAI F ++ + + Sbjct: 422 SPESVE-----VYGRRGLS---------YAQLKNYPAAIEDFSSLIKSQPK---NHQGYT 464 Query: 232 RLVEAYVALALMDEARE---VVSLIQERYPQGYWAR 264 Y+ L ++A + I P+ Y+AR Sbjct: 465 YRCRVYIELKDYNQAMKDCNQAVAIAPNNPEVYFAR 500 >gi|237812363|ref|YP_002896814.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei MSHR346] gi|237506629|gb|ACQ98947.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei MSHR346] Length = 1451 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A L L +F +A F + P A +S + + A + + + Sbjct: 906 RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 962 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + ++ ++Y Sbjct: 963 LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 994 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 +LA+ G Y Y A++ R + H EA+ L Sbjct: 995 VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 1048 Query: 240 LALMDEAREVVS 251 + + E+ EV+ Sbjct: 1049 VDRLAESEEVLR 1060 >gi|254179720|ref|ZP_04886319.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655] gi|184210260|gb|EDU07303.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655] Length = 1454 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A L L +F +A F + P A +S + + A + + + Sbjct: 909 RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 965 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + ++ ++Y Sbjct: 966 LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 997 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 +LA+ G Y Y A++ R + H EA+ L Sbjct: 998 VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 1051 Query: 240 LALMDEAREVVS 251 + + E+ EV+ Sbjct: 1052 VDRLAESEEVLR 1063 >gi|167845602|ref|ZP_02471110.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei B7210] gi|254197877|ref|ZP_04904299.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13] gi|169654618|gb|EDS87311.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13] Length = 1451 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A L L +F +A F + P A +S + + A + + + Sbjct: 906 RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 962 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + ++ ++Y Sbjct: 963 LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 994 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 +LA+ G Y Y A++ R + H EA+ L Sbjct: 995 VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 1048 Query: 240 LALMDEAREVVS 251 + + E+ EV+ Sbjct: 1049 VDRLAESEEVLR 1060 >gi|167910819|ref|ZP_02497910.1| hypothetical protein Bpse112_10010 [Burkholderia pseudomallei 112] gi|254188884|ref|ZP_04895395.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pasteur 52237] gi|157936563|gb|EDO92233.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pasteur 52237] Length = 1451 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A L L +F +A F + P A +S + + A + + + Sbjct: 906 RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 962 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + ++ ++Y Sbjct: 963 LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 994 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 +LA+ G Y Y A++ R + H EA+ L Sbjct: 995 VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 1048 Query: 240 LALMDEAREVVS 251 + + E+ EV+ Sbjct: 1049 VDRLAESEEVLR 1060 >gi|189423652|ref|YP_001950829.1| peptidoglycan-binding LysM [Geobacter lovleyi SZ] gi|189419911|gb|ACD94309.1| Peptidoglycan-binding LysM [Geobacter lovleyi SZ] Length = 193 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 8/50 (16%), Positives = 21/50 (42%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 ++ Y A+ K+ + A + F++ +P + + ++ L A Sbjct: 140 EKNAYNHAMENFKKGDCEAAIKQFDRFISRYPSSSLLPEATLNRAECYLK 189 >gi|76809563|ref|YP_333589.1| TPR repeat-containing protein [Burkholderia pseudomallei 1710b] gi|167738470|ref|ZP_02411244.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei 14] gi|217421376|ref|ZP_03452880.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576] gi|242316339|ref|ZP_04815355.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b] gi|254258508|ref|ZP_04949562.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a] gi|254297570|ref|ZP_04965023.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e] gi|76579016|gb|ABA48491.1| Tetratricopeptide repeat family [Burkholderia pseudomallei 1710b] gi|157807326|gb|EDO84496.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e] gi|217395118|gb|EEC35136.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576] gi|242139578|gb|EES25980.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b] gi|254217197|gb|EET06581.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a] Length = 1451 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A L L +F +A F + P A +S + + A + + + Sbjct: 906 RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 962 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + ++ ++Y Sbjct: 963 LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 994 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 +LA+ G Y Y A++ R + H EA+ L Sbjct: 995 VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 1048 Query: 240 LALMDEAREVVS 251 + + E+ EV+ Sbjct: 1049 VDRLAESEEVLR 1060 >gi|113475906|ref|YP_721967.1| hypothetical protein Tery_2266 [Trichodesmium erythraeum IMS101] gi|110166954|gb|ABG51494.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101] Length = 1213 Score = 41.6 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 71/223 (31%), Gaps = 50/223 (22%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARKSLLMSAFVQYSAGKYQQAASL 116 +K + F +A F Q +P + A + S G ++ A Sbjct: 397 QKGNALINLSRFDEAEAVFQQLKEKYPNRPHGYERYAALTQ--------SLGDWELALKR 448 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 E + ++P +N+D+ + + R +++E+Y N Sbjct: 449 WSEAVFKFP--ENIDF-QVQKANALINLSR--------FDEAEAVFQQLIEKYPN---QP 494 Query: 177 GARFYVTVGRNQLAAKEV-------EIGR------YYLKRGEYVAAIPRFQL-------V 216 L E+ I + +YL++G+ +A + R++ V Sbjct: 495 DGYERCAALTQSLGDWELALERWENAIAKFPGHFNFYLQKGDVLANLFRYEEAEIWWEKV 554 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +A Y E + + L + A + E++P Sbjct: 555 IALYP---ARHEGLYKSAALARLLGNREFAWQRFEQAIEKFPG 594 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 66/205 (32%), Gaps = 48/205 (23%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARKSLLMSAFVQYSAGKYQQAASL 116 +K + F +A F Q +P + A + S G ++ A Sbjct: 329 QKGNALINLSRFDEAEAVFQQLKEKYPNRPHGYERYAALTQ--------SLGDWELALKR 380 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 E + ++P +N+D+ G + + R ++ E+Y N P+ Sbjct: 381 WSEAVFKFP--ENIDF-QVQKGNALINLSR--------FDEAEAVFQQLKEKYPNRPHG- 428 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE--HAEEAMARLV 234 L E+ A+ R+ + + + ++A Sbjct: 429 --YERYAALTQSLGDWEL--------------ALKRWSEAVFKFPENIDFQVQKA----- 467 Query: 235 EAYVALALMDEAREVVSLIQERYPQ 259 A + L+ DEA V + E+YP Sbjct: 468 NALINLSRFDEAEAVFQQLIEKYPN 492 Score = 35.9 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 66/212 (31%), Gaps = 46/212 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARKSLLMSAFVQYSAGKYQQAASL 116 +K + F +A F +P + AR + G + A L Sbjct: 261 QKGNTLINLARFDEAKAVFQHLKEKYPNQPQGYENYARLI--------HRLGDGELALKL 312 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 E I ++P+ V V G + + R ++ E+Y N P+ Sbjct: 313 WSEAIIKFPK-PIVFQVQ--KGNALINLSR--------FDEAEAVFQQLKEKYPNRPHG- 360 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 L E+ A+ R+ + + + + + A Sbjct: 361 --YERYAALTQSLGDWEL--------------ALKRWSEAVFKFPENIDFQ---VQKGNA 401 Query: 237 YVALALMDEAREVVSLIQERYPQGY--WARYV 266 + L+ DEA V ++E+YP + RY Sbjct: 402 LINLSRFDEAEAVFQQLKEKYPNRPHGYERYA 433 >gi|166362748|ref|YP_001655021.1| TPR repeat-containing protein [Microcystis aeruginosa NIES-843] gi|166085121|dbj|BAF99828.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843] Length = 266 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 30/232 (12%), Positives = 68/232 (29%), Gaps = 59/232 (25%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 +++ + D S +R + EKA+ ++ ++++A Y+ Q FP Sbjct: 9 LSLLLFFALPIAAYADSPTISEEQIREGEVIAEKALEATEKGDYAQAESYWTQLVAKFPT 68 Query: 90 AG--VARKS-------LLMSAFVQYSA----------------------GKYQQAASLGE 118 + + L A ++ GKYQ+A + Sbjct: 69 NPAVWSNRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEGEGKYQEAIADYN 128 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + P + Y G + + + ++ + + N + + Sbjct: 129 KVLELDPND---AFAYNNRGNAEGGL--------GDWEAAVKDYRQATQLAPNFAWAQ-- 175 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 LA E+ G Y A+ + + + Y A+ Sbjct: 176 ------ANLALALYEL---------GRYPEAVQKMRNIARKYPMFPDVRAAL 212 >gi|154493385|ref|ZP_02032705.1| hypothetical protein PARMER_02722 [Parabacteroides merdae ATCC 43184] gi|154086595|gb|EDN85640.1| hypothetical protein PARMER_02722 [Parabacteroides merdae ATCC 43184] Length = 1052 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 38/239 (15%), Positives = 83/239 (34%), Gaps = 54/239 (22%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMS 100 ++R L + D +Y + ++ ++ + KA +Y ++ F +L Sbjct: 448 TNRPKELPADFDWNSAYGLYIQGEQWMNQKVYDKAEKYLTASLEKEAYFLP----ALTSL 503 Query: 101 AFVQYSAGKYQQAA---------SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 A + Y G+Y+ A + + Y YL G+ + + Sbjct: 504 ASLYYRQGRYEDALFNCHIALSVNAYDGYSN------------YLYGLCNMALGNETD-- 549 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 K S + + ++ Y K A ++ + A Y LK ++ Sbjct: 550 ---AKDGFSVASYSIS-FRSAAYEKLAEMFLIACDWKKAEH------YALKSKDFN---- 595 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + +A L+ AY + M++A+ V+ + + P + AR+ + L+ Sbjct: 596 ------------QQNLKADQVLMIAYRKMGQMNKAKAVIDSLLDDLPLYHLARFEDLLL 642 >gi|167855102|ref|ZP_02477874.1| hypothetical protein HPS_06724 [Haemophilus parasuis 29755] gi|167853737|gb|EDS24979.1| hypothetical protein HPS_06724 [Haemophilus parasuis 29755] Length = 397 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 74/197 (37%), Gaps = 32/197 (16%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 +++ +++++ K A F+ + +A Y+ + A SL A + Sbjct: 103 IENSPHYSFEQKLLAKQQLAKDFMAAGFYDRAENYYITLLDE---PEFAVNSLSQLAVIY 159 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + ++++A ++ E+ + PE + +Y D++A LQ Sbjct: 160 HKTREWKRAINVAEKRLRIEPEMDKIPLSHYY---CEYAQAVRSD-DEKAFLTALQ---- 211 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 A YV A + +G ++ ++ E A+ F+ VL + Sbjct: 212 ------------KALSYVPHC----ARASILLGDFFFEKQEMRTALRYFEAVLEQEPN-- 253 Query: 225 HAEEAMARLVEAYVALA 241 + E + ++ + Y+AL Sbjct: 254 YISEVLHKIKQCYIALN 270 >gi|83311940|ref|YP_422204.1| O-linked N-acetylglucosamine transferase [Magnetospirillum magneticum AMB-1] gi|82946781|dbj|BAE51645.1| Predicted O-linked N-acetylglucosamine transferase [Magnetospirillum magneticum AMB-1] Length = 728 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 66/205 (32%), Gaps = 36/205 (17%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ + + L++ + +A F + A + S GK +AA Sbjct: 8 LFRQGIGALQQGKWDEAARQFRTLTGR---TPNAPEPFYYLGVALLSGGKPDEAAETLTR 64 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-------- 171 I ++ ++ L + AQ T + R++ + Sbjct: 65 LIRKHGDNPMA-----LNALGSAQAASG------KTGPAEKSFKRVLALAPDLSDAAENL 113 Query: 172 ------SPYVKG--ARFYVTVGRN--QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 S A + R +LA++ + +GR GE A+ FQ VL Sbjct: 114 ARLLIESQRAAEALAPLRSVLSREPGRLASRHL-LGRALRDTGELEGAMAEFQAVLKAQP 172 Query: 222 DAEHAEEAMARLVEAYVALALMDEA 246 D A A+ L Y A ++A Sbjct: 173 D--FAP-ALNDLGLLYFAGGKGEDA 194 >gi|312130007|ref|YP_003997347.1| histidine kinase [Leadbetterella byssophila DSM 17132] gi|311906553|gb|ADQ16994.1| histidine kinase [Leadbetterella byssophila DSM 17132] Length = 604 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 85/241 (35%), Gaps = 49/241 (20%) Query: 49 DSVTDVRYQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----- 102 + D+ R +Y+ + L ++ KA +Q + + +A +M F Sbjct: 15 PAHPDLSKARAIYDSTEVALANRGDYKKAEALLDQAQK----SSLATDVKMMLTFGLRGQ 70 Query: 103 -----VQYSAGKYQ--QAASLGEE-----YI----------TQYPESKNVDYVYYLVGMS 140 Y + +A E+ +I + N YY Sbjct: 71 IEGYRSNYFNSDFYLFEALKYAEKLNAEYFISEISHALAINKRQEGDLNAAAAYY----- 125 Query: 141 YAQMIRDVPYDQRATKLMLQYMS-RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + I + DQ++ +L L Y + +V + S F + ++ A G + Sbjct: 126 -DKAIENAEKDQKSPRLALMYNNYGLVYLHKASLDSAEMMFRKSYDLSKDAGYRSGEGYF 184 Query: 200 Y-------LKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR--LVEAYVALALMDEAREVV 250 + LK+ +Y A+ F+ + +S +A+ + + E Y AL M +A + + Sbjct: 185 FSNMGSIRLKQKKYQEALSFFEKGMEVFSGVNG-PQALLKKEMAECYFALGQMKDAEQKI 243 Query: 251 S 251 S Sbjct: 244 S 244 >gi|325107986|ref|YP_004269054.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] gi|324968254|gb|ADY59032.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] Length = 361 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 81/221 (36%), Gaps = 25/221 (11%) Query: 62 EKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 A L +++ ++ A + + P R + L Y +Y A + Sbjct: 88 NLAELSIQQDDYPAAVDELKRYVELQSSDPQG-YLRLAQL-----YYLQNRYDAAEEWLD 141 Query: 119 EYITQYPESKNV---------DYVYYLVGMS-YAQMIRDVPYDQRATKLMLQYMSRIVER 168 E I + P + + + +S Y ++ +P+ AT + + + E Sbjct: 142 EVIRRTPNNFDAVMLSARLARKQADHQKAISEYYHALQVMPHHAEATLELSELLIARHEP 201 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y S ++ + +Q A + +G Y + + A+ + + V N +D+E A + Sbjct: 202 YRASSLLRDLSRRALMEEDQ-ARTHLNLGIAYGQIDRWDDAVEQLE-VARNLNDSELARD 259 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 RL A+ +++ + L+ E G W + L Sbjct: 260 R-YRLAYAHWKSG---GSQQALKLLIEMADSGQWNERSDAL 296 >gi|300870997|ref|YP_003785868.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] gi|300688696|gb|ADK31367.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] Length = 790 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 64/193 (33%), Gaps = 30/193 (15%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 +S +D + + EK+ + L + A E N+ + Sbjct: 88 ESLKDFDISIKLNPNIDNTYLEKSNVLLDINKYEDAIENLNKAITLNQNNSY---AYFNR 144 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + + G+Y+ A I ++ + YV +G++ + + + ++ Sbjct: 145 GIAKSNLGRYEDAIDDYNRAIELNSNNEEI-YVD--IGIAKSNL--------GKYEESIE 193 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYV 207 Y ++ ++ N+ A + + L E I + Y RG Sbjct: 194 YYNKAIKLNPNN---SDAYLNRGISKGYLGKYESSINDFNKSIELTPNDENSYFNRGISK 250 Query: 208 AAIPRFQLVLANY 220 A + R++ + +Y Sbjct: 251 AYLRRYEESINDY 263 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 27/190 (14%), Positives = 53/190 (27%), Gaps = 41/190 (21%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + + + + A + +N+ + + + + GKY+++ + Sbjct: 141 YFNRGIAKSNLGRYEDAIDDYNRAIEL---NSNNEEIYVDIGIAKSNLGKYEESIEYYNK 197 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP--YVKG 177 I P + + Y G+S + + + ++ +E N Y Sbjct: 198 AIKLNPNNSD---AYLNRGISKGYL--------GKYESSINDFNKSIELTPNDENSYFNR 246 Query: 178 ARFYVTVGRNQLAAKEVEIGRY-------------YLKRGE-------YVAAIPRFQLVL 217 R E I Y YL RG Y AI F V+ Sbjct: 247 GISK-AYLR----RYEESINDYNKVIELNSNNSDAYLNRGASKFNLEIYEEAIKDFNKVI 301 Query: 218 ANYSDAEHAE 227 +A Sbjct: 302 ELNPNANDVY 311 >gi|332968277|gb|EGK07351.1| Sel1 repeat superfamily protein [Kingella kingae ATCC 23330] Length = 290 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 7/69 (10%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF---VQYSAGKY 110 +E+Y K V+ L + N +A +YF + + P A L + Y Sbjct: 16 SPETKEIYNKGVVALSKGNVKQAIDYFERVEYEHPSAAYN----LGLIYLDGADVLVPDY 71 Query: 111 QQAASLGEE 119 ++A ++ Sbjct: 72 EKARQYFQQ 80 >gi|225376603|ref|ZP_03753824.1| hypothetical protein ROSEINA2194_02245 [Roseburia inulinivorans DSM 16841] gi|225211486|gb|EEG93840.1| hypothetical protein ROSEINA2194_02245 [Roseburia inulinivorans DSM 16841] Length = 397 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 69/252 (27%), Gaps = 42/252 (16%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQ 82 +T ++ + G + + + Y + + ++ +++ A + FN Sbjct: 45 ITALTLLSFTLMTGCTN------------ERKENQTAYRQIGINAMESGDYAGAVDAFNS 92 Query: 83 CSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + L + QY+ G A I K YYL G Sbjct: 93 ALGQC-IGKITEN-ELDICYYKAAAQYAGGDPAGAVDTYTAIID---YDKKAADAYYLRG 147 Query: 139 MSYAQMIRD----VPYDQRATKLMLQYMSRIVERYTN-SPY--VKGARFYVTVGRNQLAA 191 Y + +D A K V Y N S Y + Y+ + Sbjct: 148 CVYLKQGNTEGAVSDFD-EAVKNNSSDYELYVNIYENLSAYDMTEKGEEYLNKAFDIKGN 206 Query: 192 K-EVEI--GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 E GR Y G+Y A + L E + + Y A + A Sbjct: 207 SAEDYAWRGRIYYDLGQYDNAQTELKSALDK----ESVIANLYI-AQVYEAQGDPENAET 261 Query: 249 VVSLIQERYPQG 260 + Y Sbjct: 262 YY----QNYVNS 269 >gi|224537035|ref|ZP_03677574.1| hypothetical protein BACCELL_01911 [Bacteroides cellulosilyticus DSM 14838] gi|224521343|gb|EEF90448.1| hypothetical protein BACCELL_01911 [Bacteroides cellulosilyticus DSM 14838] Length = 739 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 9/69 (13%), Positives = 21/69 (30%), Gaps = 7/69 (10%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--LMSAFVQYSAGKYQQAASLGEEYI 121 A + + N+++A E +L + Y + +A E + Sbjct: 449 ARSYNNQGNYNEAIEQLLSVKE-----ECKEDALWFYRLGYAYYYLNQLDKAQKAFERSL 503 Query: 122 TQYPESKNV 130 P ++ Sbjct: 504 ELDPSDEDA 512 >gi|255692989|ref|ZP_05416664.1| putative TPR domain protein [Bacteroides finegoldii DSM 17565] gi|260621301|gb|EEX44172.1| putative TPR domain protein [Bacteroides finegoldii DSM 17565] Length = 585 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 65/199 (32%), Gaps = 38/199 (19%) Query: 61 YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARK-SLLMSAFVQYSAGKYQQAASLG 117 Y + ++ L ++ KA FP A++ L + KY S Sbjct: 117 YSQGLVSLYQQQNELDKAVTLLETMVTRFP----AKQDPLFNLLDIYSHQEKYNDVISTL 172 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + +++ + + + Y QM D K + + +V+ Y Sbjct: 173 NRLEKRLGKNEQLSMEKFRI---YLQMKDD--------KKAFREIESLVQEYP------- 214 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 + + +V +G YL+ G+ A +Q VLA D A+ + Y Sbjct: 215 ----MDM------RYQVILGDVYLQNGKKQEAYEAYQKVLAVEPD---NPMALFSMASYY 261 Query: 238 VALALMDEAREVVSLIQER 256 + + ++ + + Sbjct: 262 DQIGQKELYQQQLDTLLLN 280 >gi|85858278|ref|YP_460480.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB] gi|85721369|gb|ABC76312.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB] Length = 649 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 62/188 (32%), Gaps = 39/188 (20%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A + + ++ A + + + P + A V KY+ A +L EE I Q Sbjct: 428 AEAHMLNKEYNLASDTLEKALKANPRS--APLLSAPLVQVYMKQKKYESALALLEERIQQ 485 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN------------ 171 P + L G Y ++ + + + +++++ Sbjct: 486 NPGD---AFALNLRGQVYNAQGDEL-KAAESYRQAMAVYEKVLQKQPENWVAANDLAFLL 541 Query: 172 SPYVKG--------ARFYVTVGRNQLAAKEV---EIGRYYLKRGEY-------VAAIPRF 213 S Y A GRN A +G Y K+G+Y V AI + Sbjct: 542 SEYGSKPGDLDRALALARKAYGRN--AENPAVLDTLGWIYYKKGDYRQAEALIVKAINKA 599 Query: 214 -QLVLANY 220 + V+ NY Sbjct: 600 PESVMLNY 607 >gi|291239488|ref|XP_002739657.1| PREDICTED: OSMotic avoidance abnormal family member (osm-5)-like [Saccoglossus kowalevskii] Length = 826 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 37/293 (12%), Positives = 84/293 (28%), Gaps = 53/293 (18%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVC-FLVGWERQSSRDVYLDSVTDVRYQREV 60 +AI + + + K A +++ FL + + + + D + Sbjct: 423 QKDTTQAIETLKGFEKKDSKCASAASTNLSFLYFLQNDYQLADKYAEMAIQADRYNPYAM 482 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 K + ++ KA EY+ + R + +L + A + Sbjct: 483 VNKGNCLFAQGDYEKAREYYQEAGRTD--SSCTE-ALYNLGLTNKKINLLEDALDC---F 536 Query: 121 ITQYPESKNVDYVYYLVGMS-------------YAQMIRDVPYDQ-------------RA 154 + + +N V Y + Y Q+I V D Sbjct: 537 LKLHAILRNSPQVLYHLATLYEMLEDSAQASEWYMQLIGVVTTDPGILARLGEIYDNEGD 596 Query: 155 TKLMLQYMSRIVERYT--------------NSPYVKGAR---FYVTVGRNQLAAKEVEIG 197 QY + +S + + A V + + ++ I Sbjct: 597 KSQAFQYHYESYRYFPSNIEIIEWLGAYYIDSQFCEKAIHYFERAAVIQPTQSKWQLMIA 656 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 + + G Y A+ ++ + + + E + LV + L +A++ Sbjct: 657 SCHRRSGNYQQALETYKHIHKKFPE---NIECLKFLVRLCTDMGLTKDAQDYA 706 >gi|255944463|ref|XP_002562999.1| Pc20g04550 [Penicillium chrysogenum Wisconsin 54-1255] gi|211587734|emb|CAP85784.1| Pc20g04550 [Penicillium chrysogenum Wisconsin 54-1255] Length = 748 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 41/134 (30%), Gaps = 26/134 (19%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 EK ++ ++ A + +++ P V + L A + + A E+ + Sbjct: 206 EKGSEHFEKGDYHSAIQCYSKALETHPSPEVLVIAQLNRALSLLKSYSFDAALGDVEDVL 265 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 S+ + + + Q+ R Q + E+Y + Sbjct: 266 QV---SEMSEKALFRKAQALYQLRRLNESCQTH--------EILAEKYPD---------- 304 Query: 182 VTVGRNQLAAKEVE 195 N LAA E Sbjct: 305 -----NTLAAHEYA 313 >gi|260494916|ref|ZP_05815045.1| tetratricopeptide repeat family protein [Fusobacterium sp. 3_1_33] gi|260197359|gb|EEW94877.1| tetratricopeptide repeat family protein [Fusobacterium sp. 3_1_33] Length = 936 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 67/204 (32%), Gaps = 29/204 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K + + + +A F + + ++ K L + A +Y +A GE+Y Sbjct: 508 YLKGIAAMGLGKYDEAEADFQKVLASGDQS-LSTKVYLNRVRNYFLAERYNEAVQAGEQY 566 Query: 121 I-TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P+ + Y L +G+SY ++ + YDQ S Y K Sbjct: 567 LSKITPDKEKAIYSEMLDKIGLSYFRLGK---YDQAR-----------------SYYSKI 606 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A + +I Y Y A ++ V NY + + E+A + + Sbjct: 607 ASMKGYEVYGK-----FQIADSYYNEKNYEKAASLYKEVYNNYGETFYGEQAYYKYIMTL 661 Query: 238 VALALMDEAREVVSLIQERYPQGY 261 D + YP Sbjct: 662 SLTGNTDAFEREKDNFMKVYPNSN 685 >gi|254000197|ref|YP_003052260.1| hypothetical protein Msip34_2496 [Methylovorus sp. SIP3-4] gi|253986876|gb|ACT51733.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. SIP3-4] Length = 380 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 62/161 (38%), Gaps = 19/161 (11%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G ++Q++ D R ++ V+ L++ N KA +YF + + G + Sbjct: 24 AGDDKQATAICQQILAADARQPEAIHLLGVIALQDGNMEKAAQYFQKAIKL---NGKNPQ 80 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY-LVGMSYAQMIRDVPYDQRA 154 V + GK +A + + I P VD +Y L + +IR Y Sbjct: 81 YHSNLGLVSHEQGKLTEAEASYRKAIQLEPR--YVD-AWYNLHAL----LIRTGDYLP-- 131 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + L + ++ +P+ + AR + + + KE+ Sbjct: 132 AREALDMVLKL------NPHDQEARLMMVILLDYAGEKELS 166 >gi|225376839|ref|ZP_03754060.1| hypothetical protein ROSEINA2194_02481 [Roseburia inulinivorans DSM 16841] gi|225211335|gb|EEG93689.1| hypothetical protein ROSEINA2194_02481 [Roseburia inulinivorans DSM 16841] Length = 460 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 8/82 (9%), Positives = 25/82 (30%), Gaps = 7/82 (8%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109 + Y +Y++ + + A ++ ++ +L A Sbjct: 368 NAEYMAALYKEGYDAYSGKKYDDAVSALSKVVEMDENYENGN----ALYYLAQAYRKNED 423 Query: 110 YQQAASLGEEYITQYPESKNVD 131 + A ++ + YP ++ Sbjct: 424 MENAKIYYQKVVELYPNTERAA 445 >gi|327273355|ref|XP_003221446.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4-like [Anolis carolinensis] Length = 433 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 2/84 (2%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKA 76 + L ++A+C L E + ++ D ++ ++ + L +F A Sbjct: 291 KAKSLRLAAHLNLAMCHLKLKEYSHVLENCNKALELDNSNEKGLFRRGEAHLAVNDFELA 350 Query: 77 YEYFNQCSRDFPFAGVARKSLLMS 100 E F + + +P + A K+ LM Sbjct: 351 REDFQKVLQLYP-SNKAAKAQLMI 373 >gi|326430017|gb|EGD75587.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818] Length = 826 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 76/245 (31%), Gaps = 61/245 (24%) Query: 50 SVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFP--------FA-G 91 D R +Y+ + + K + KA E+F + P F Sbjct: 309 EGEDGRNVAGLYDSLGIAYTKTGEYDKAIEHFEKALAIKVEVLGEKHPSTAHTYGNFGLP 368 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 +K A + +A +LGE + VY +G +Y Sbjct: 369 YLQKGENDQAIKYFERSLAIKAETLGER-------HPDTALVYNNIGGAYENKAEYGKAI 421 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 ++ K + + + E++ ++ A +G Y K+G++ AI Sbjct: 422 EQFQKALAVKVETLGEKHPST-----------------AQTYGNLGNAYYKQGKHDMAIE 464 Query: 212 RFQLVL--------ANYSDAEHAEEAMARLVEAYVALALMDEARE--------VVSLIQE 255 + L N+ + ++ + AYV + +A + + E Sbjct: 465 HAEKALQVFVETLGENHPNTAQTYKS---MGRAYVGKSDYIKAMQCYKKALAITARTLGE 521 Query: 256 RYPQG 260 ++P Sbjct: 522 KHPDT 526 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 65/221 (29%), Gaps = 65/221 (29%) Query: 64 AVLFLKEQNFSKAYEYFNQ--------CSRDFP---------FAGVARKSLL-------- 98 + +L++ +A +YF + P K+ Sbjct: 366 GLPYLQKGENDQAIKYFERSLAIKAETLGERHPDTALVYNNIGGAYENKAEYGKAIEQFQ 425 Query: 99 ----------------------MSAFVQYSAGKYQQAASLGEEYITQY-----PESKNVD 131 Y GK+ A E+ + + N Sbjct: 426 KALAVKVETLGEKHPSTAQTYGNLGNAYYKQGKHDMAIEHAEKALQVFVETLGENHPNTA 485 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Y +G +Y + Q K + + E++ ++ A Y+ VG Q + Sbjct: 486 QTYKSMGRAYVGKSDYIKAMQCYKKALAITARTLGEKHPDT-----ATAYLKVGILQFQS 540 Query: 192 KEVEIGRYYLKRGE--YVAAIPRFQLVLANYSDAEHAEEAM 230 +VE R Y++R Y+A + ++ + A +++ Sbjct: 541 GDVEQARTYIQRAHSIYMATLG------PDHPNTRRAAQSL 575 >gi|282900369|ref|ZP_06308319.1| Lytic transglycosylase, catalytic [Cylindrospermopsis raciborskii CS-505] gi|281194682|gb|EFA69629.1| Lytic transglycosylase, catalytic [Cylindrospermopsis raciborskii CS-505] Length = 724 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 2/82 (2%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +R Y A +++ A E +D+P +A LL A Q G+ A+ L Sbjct: 88 ERARYVLASDYIQTNQGKPALELLVGLEKDYP--ALAPYILLKQAQAQDMLGEKGLASDL 145 Query: 117 GEEYITQYPESKNVDYVYYLVG 138 + + YP+S YL+G Sbjct: 146 RQRVLRDYPQSPAAVKAMYLIG 167 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 73/216 (33%), Gaps = 28/216 (12%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + +Y A ++ +A + Q + FP +LL A + A Sbjct: 259 KTAKNLYRTARGLQIDKKREEATVIYKQQVKLFPKEKETGIALLRLA----EMSSGKDAI 314 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 ++ I Q+P +++ + +Q Q ++ +Y++S Sbjct: 315 PYLDQIIAQFPS--QAPQALAQKA----KLLTSLKDNQS----ANQTWKLLLSKYSSS-- 362 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 A +N LA K +Y+ A Q + ++ A A + Sbjct: 363 --DAATEYRW-QNALAK---------AKNRDYIGAWEWAQPIPTQNPESILAPRASFWVG 410 Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + L +EAR+ + +PQ Y+A ++ Sbjct: 411 KWASLLGKNEEARKSYEYVLANFPQSYYAWRSARIL 446 >gi|257052086|ref|YP_003129919.1| TPR repeat-containing protein [Halorhabdus utahensis DSM 12940] gi|256690849|gb|ACV11186.1| TPR repeat-containing protein [Halorhabdus utahensis DSM 12940] Length = 251 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 34/105 (32%), Gaps = 13/105 (12%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A L+E + A + + P + A + A+ + +G+ +QA E + Sbjct: 106 AAHAELEE--YDAAMGAYREAIEIDPDSEHAATAETNLAYALWESGRSEQALEHAERAVE 163 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 P +Y G + + R + + + + Sbjct: 164 IDPRFPQ---AWYNRG--FFLLERGL------AEEAIDAFDNAIR 197 >gi|219870698|ref|YP_002475073.1| tetratricopeptide repeat protein [Haemophilus parasuis SH0165] gi|219690902|gb|ACL32125.1| lipopolysaccharide N-acetylglucosaminyltransferase [Haemophilus parasuis SH0165] Length = 397 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 65/178 (36%), Gaps = 29/178 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A F+ + +A Y+ + A SL A + + ++++A ++ E+ + Sbjct: 122 AKDFMAAGFYDRAENYYITLLDE---PEFAVNSLSQLAVIYHKTREWKKAINVAEKRLRI 178 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 PE + +Y D++A LQ A YV Sbjct: 179 EPEMDKIPLSHYY---CEYAQAVRSD-DEKAFLTALQ----------------KALSYVP 218 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 A + +G ++ ++ E A+ F+ VL + + E + ++ + Y+AL Sbjct: 219 HC----ARASILLGDFFFEKQEMRTALHHFEAVLEQEPN--YISEVLHKIKQCYIALN 270 >gi|209527046|ref|ZP_03275562.1| glycosyl transferase group 1 [Arthrospira maxima CS-328] gi|209492557|gb|EDZ92896.1| glycosyl transferase group 1 [Arthrospira maxima CS-328] Length = 1671 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 6/69 (8%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A + + +S+A + + + + + ++ + L+ + + + +A + + + Sbjct: 578 QQAQTAMDKGEWSEAAGCWRKLWKVYA-SSLSPEVLISISHNLFKLDAFTEAQACLKRVL 636 Query: 122 TQYPESKNV 130 P+ + Sbjct: 637 ASNPQHRKA 645 >gi|192361757|ref|YP_001983772.1| tetratricopeptide repeat domain-containing protein [Cellvibrio japonicus Ueda107] gi|190687922|gb|ACE85600.1| tetratricopeptide repeat domain protein [Cellvibrio japonicus Ueda107] Length = 964 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 27/208 (12%), Positives = 54/208 (25%), Gaps = 35/208 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFP------FAGVARKSLLMSAFVQYSA-------GKY 110 + +++S+A + + Q P A A++ A Y G Sbjct: 574 GHSLFELKDYSQAEQAYTQVLALHPAHGNKPGAPSAQQVRERIAASIYRQAEASLEFGDK 633 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A S P++ Y G+ + Q ++Y Sbjct: 634 DTAISQLLRITQVTPDTDIAIKAQYDAGLYLME--------QEKWSQAENVYLGFRQKYP 685 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 + + Y + ++ A ++ + SD E +++ Sbjct: 686 QHSLTATLPAKMVLI--------------YQSQEKWQLAADELVVMERSSSDPEVKRQSL 731 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYP 258 E Y +A E YP Sbjct: 732 YMGAELYEKSGRRTQAIEQYRRYALEYP 759 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 28/218 (12%), Positives = 66/218 (30%), Gaps = 35/218 (16%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-------FAGVARKSLLMSAFVQ 104 D R + + L +Q FS+A + P F+ L+ Sbjct: 523 ADTRALPVLADAGSDLLAQQRFSEARIVAERVIAWQPPADGKLLFSAW-----LILGHSL 577 Query: 105 YSAGKYQQAASLGEEYITQYPES------KNVDYVYYLVGMSYAQMIR-DVPYDQRATKL 157 + Y QA + + +P + V + S + + + + T Sbjct: 578 FELKDYSQAEQAYTQVLALHPAHGNKPGAPSAQQVRERIAASIYRQAEASLEFGDKDT-- 635 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + + RI + ++ A+ + G Y +++ ++ A + Sbjct: 636 AISQLLRITQVTPDTDIAIKAQ--------------YDAGLYLMEQEKWSQAENVYLGFR 681 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 Y A++V Y + A + + +++ Sbjct: 682 QKYPQHSLTATLPAKMVLIYQSQEKWQLAADELVVMER 719 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 65/193 (33%), Gaps = 23/193 (11%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 R +Y +A L+ + A + ++ P +A K+ + K+ QA Sbjct: 614 ERIAASIYRQAEASLEFGDKDTAISQLLRITQVTPDTDIAIKAQYDAGLYLMEQEKWSQA 673 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 ++ + +YP+ + + + Q +L + ++ER ++ P Sbjct: 674 ENVYLGFRQKYPQHSLTA--------TLPAKMVLIYQSQEKWQLAADEL-VVMERSSSDP 724 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE-EAMAR 232 VK Y+ Y K G AI +++ Y EA + Sbjct: 725 EVKRQSLYMG-------------AELYEKSGRRTQAIEQYRRYALEYPRPFANNLEAQHK 771 Query: 233 LVEAYVALALMDE 245 L E Y A D+ Sbjct: 772 LTELYQATGEQDK 784 >gi|15893706|ref|NP_347055.1| TPR repeat-containing protein [Clostridium acetobutylicum ATCC 824] gi|15023268|gb|AAK78395.1|AE007556_5 TPR-repeat-containing protein [Clostridium acetobutylicum ATCC 824] gi|325507828|gb|ADZ19464.1| TPR-repeat-containing protein [Clostridium acetobutylicum EA 2018] Length = 436 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 70/209 (33%), Gaps = 19/209 (9%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D Y+ KA L K + A E +N+ K LL + Y++ Sbjct: 141 DPNYKEAYVSKARLEKKLGKYEDALETYNKLENL---EKNNNKILLDMIKINIDMKNYKE 197 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A S E+ I YPE + YY+ G+ + + L+ ++ + Y Sbjct: 198 ALSEVEKLIKIYPEESSG---YYIKGV-LVNYLGKSEESLKFINKALRLDTKNPKIYYEK 253 Query: 173 PYVKGARFYVTVGRNQLAA--------KEVEIGR--YYLKRGEYVAAIPRFQLVL--ANY 220 + L E I R +K G+Y A+ + ++ N Sbjct: 254 ALIYSNIKKYDKALEFLEETISIDPDYYEAYILRIDILMKTGKYSEAVYYCRTLINRDNT 313 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREV 249 +A R+ AY A+ +A E+ Sbjct: 314 KMYSAYGKAPYRMYLAYKAMGKKKDADEI 342 >gi|15639635|ref|NP_219085.1| hypothetical protein TP0648 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025873|ref|YP_001933645.1| hypothetical protein TPASS_0648 [Treponema pallidum subsp. pallidum SS14] gi|3322946|gb|AAC65621.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018448|gb|ACD71066.1| hypothetical protein TPASS_0648 [Treponema pallidum subsp. pallidum SS14] Length = 682 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 38/217 (17%) Query: 59 EVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++YE ++++ A E++ ++ + + A Y+ G+Y QA Sbjct: 47 QLYEAGRKAHVQEDWHAAIEFYQEALKKNASYN----LAYRGLAECFYALGEYDQALHHV 102 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + + L + ++ DQ I+ RY N Sbjct: 103 RKAQKL------MAQDLSLEKLCAFSLVGQGELDQ-----ARSLFEEILARYPN-----D 146 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR--------FQLVLANYSDAEHAEEA 229 LA EV GR R Y AA+ R L L +Y +A H A Sbjct: 147 VDARFG-----LAEIEVSKGRLSSARLLYQAALERQAENRKALLSLALISY-EAGHYPRA 200 Query: 230 MARLVEAYVALALMDEA---REVVSLIQERYPQGYWA 263 + + A + ++ ++ Y Sbjct: 201 LTYVERALQYHGDNAQVHFFAAYLATLRAHYEDAERY 237 >gi|209549954|ref|YP_002281871.1| hypothetical protein Rleg2_2370 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535710|gb|ACI55645.1| TPR repeat-containing protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 1272 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 6/84 (7%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +++ R++ D + + + +L+ KA E S P +S L Sbjct: 517 MKEAKREIDAALAADPSFDIALLARGRYYLQTGERDKALEDLLAASTANPAHS---QSQL 573 Query: 99 MSAFVQYSAGK---YQQAASLGEE 119 M A Y G +QA + Sbjct: 574 MLAAAHYEKGDRIPSEQAVDNADR 597 >gi|52843050|ref|YP_096849.1| hypothetical protein lpg2854 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52630161|gb|AAU28902.1| hypothetical protein lpg2854 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 308 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 8/70 (11%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A + ++ +A + FN+ + GKY++A ++ + Sbjct: 56 AASAAYRAGDYEQAAKLFNELK--------TEQGYYNQGNALAHLGKYEEAIRAYDKALA 107 Query: 123 QYPESKNVDY 132 P +++ Y Sbjct: 108 FNPNNQDALY 117 >gi|259417251|ref|ZP_05741170.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B] gi|259346157|gb|EEW57971.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B] Length = 183 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 37/126 (29%), Gaps = 20/126 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117 + + ++ Q++ A E+ + P FA + ++ + A + A + Sbjct: 66 LLRRGRDAMERQDWPAAIEHLTALTDHAPDFAEGWSERAR-----AFFHAELFGPAVADL 120 Query: 118 EEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 E + P DY + +G + D R + V Sbjct: 121 ERALALNPN----DYNAIFGLGQV-FEFFGDPER-------AYAAYERAKAIHPYHEEVT 168 Query: 177 GARFYV 182 A + Sbjct: 169 KALDRL 174 >gi|219128521|ref|XP_002184460.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404261|gb|EEC44209.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 686 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 36/125 (28%), Gaps = 17/125 (13%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL----- 98 RDV D Y L + + A E + + R+S + Sbjct: 402 RDVLGPEAPDTAASH--YALGQLLSEIGQWDAAVEQYKAAVAIHE-SVYGRQSPITASGY 458 Query: 99 -MSAFVQYSAGKYQQAASLGEEYIT-----QYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 V Y Y A + + + +V + VG++ AQ +Q Sbjct: 459 NNLGAVYYQQQNYAAALTEYRKGLDILQAVLPSNHADVAAAWNNVGLALAQQ---ASREQ 515 Query: 153 RATKL 157 KL Sbjct: 516 NVAKL 520 >gi|24374287|ref|NP_718330.1| hypothetical protein SO_2746 [Shewanella oneidensis MR-1] gi|24348825|gb|AAN55774.1|AE015714_1 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 250 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 22/124 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 KY A +I QYP+S Y +G Q + + Sbjct: 140 KERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFA--------EAKQVFNTV 191 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V R+++S + + + K G+ A +Q V+ +Y+++ Sbjct: 192 VTRFSDSNKRGDSLVKLGMIAE--------------KTGDKAGATQYYQQVVKDYANSAA 237 Query: 226 AEEA 229 A A Sbjct: 238 ARIA 241 Score = 35.5 bits (81), Expect = 7.4, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 17/131 (12%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE- 118 YE AV LKE+ + A F + +P + A + + ++ ++ +A + Sbjct: 131 YESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQVFNT 190 Query: 119 ---EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + + MI + D+ QY ++V+ Y NS Sbjct: 191 VVTRFSDSNKRGDS---------LVKLGMIAEKTGDKAG---ATQYYQQVVKDYANSAAA 238 Query: 176 KGARFYVTVGR 186 + A+ + + Sbjct: 239 RIAQQQLAAIK 249 >gi|153826257|ref|ZP_01978924.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|229520295|ref|ZP_04409721.1| hypothetical protein VIF_000815 [Vibrio cholerae TM 11079-80] gi|229523852|ref|ZP_04413257.1| hypothetical protein VCA_001431 [Vibrio cholerae bv. albensis VL426] gi|254224968|ref|ZP_04918583.1| conserved hypothetical protein [Vibrio cholerae V51] gi|297579353|ref|ZP_06941281.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|125622656|gb|EAZ50975.1| conserved hypothetical protein [Vibrio cholerae V51] gi|149740022|gb|EDM54197.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|229337433|gb|EEO02450.1| hypothetical protein VCA_001431 [Vibrio cholerae bv. albensis VL426] gi|229342661|gb|EEO07653.1| hypothetical protein VIF_000815 [Vibrio cholerae TM 11079-80] gi|297536947|gb|EFH75780.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 254 Score = 41.6 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 57/146 (39%), Gaps = 10/146 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 S+ + + + ++ Y+ AV LK+++++ A F + D+P + + + Sbjct: 118 PTSSNDEAAQGTFSSDANEQAAYQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSANAH 177 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + ++ + ++AA ++ +K D + + D+ + Sbjct: 178 YWLGQLYFAKKEDKEAAKSFAAVVSDKGSNKRAD------ALV---KLGDIAKRNNNAEQ 228 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVT 183 ++ + V+ Y +S K A+ + Sbjct: 229 ARKFYQQAVDEYPDSASAKIAKENLK 254 Score = 38.6 bits (89), Expect = 0.92, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + Y NS + A +++ G+ Y Sbjct: 140 YQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSANAHYWL--------------GQLYF 185 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + E A F V+++ + +A+ +L + ++AR+ + YP Sbjct: 186 AKKEDKEAAKSFAAVVSD-KGSNKRADALVKLGDIAKRNNNAEQARKFYQQAVDEYPDSA 244 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 245 SAKIAKENLK 254 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 39/126 (30%), Gaps = 27/126 (21%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A + +++ T YP S +Y +G Y D K + + + Sbjct: 149 KKRDYAGAIAAFQKFQTDYPNSTFSANAHYWLGQLYFAKKED--------KEAAKSFAAV 200 Query: 166 VERYTNSPYVKGARFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 V ++ A + RN A + A +Q + Y D+ Sbjct: 201 VSDKGSNKRA-DALVKLGDIAKRNNNAEQ----------------ARKFYQQAVDEYPDS 243 Query: 224 EHAEEA 229 A+ A Sbjct: 244 ASAKIA 249 >gi|108760283|ref|YP_633956.1| hypothetical protein MXAN_5819 [Myxococcus xanthus DK 1622] gi|108464163|gb|ABF89348.1| conserved domain protein [Myxococcus xanthus DK 1622] Length = 370 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 25/68 (36%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V D D E++ +F +A YF + FP + R +L + Sbjct: 38 VTADLELDKLNDEELFAGGTSAFAANDFQQAARYFGRLVDFFPDSRHRRAALYNAGLAHQ 97 Query: 106 SAGKYQQA 113 ++++A Sbjct: 98 RIKEWEEA 105 >gi|37523662|ref|NP_927039.1| kinesin light chain [Gloeobacter violaceus PCC 7421] gi|35214667|dbj|BAC92034.1| glr4093 [Gloeobacter violaceus PCC 7421] Length = 510 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 34/229 (14%), Positives = 77/229 (33%), Gaps = 60/229 (26%) Query: 64 AVLFLKEQNFSKAYEY-FNQCSRD----------FPFAGVARKSLL-MSAFVQYSAGK-- 109 A L L + ++ +A + ++ +P + L A V ++ G+ Sbjct: 259 AKLRLAQGDYGQAEDLCLESLRQNERLSGGKSPDYP-------ANLTNLAAVYHAQGRLW 311 Query: 110 -----YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 YQQA ++ ++ + ++ + ++ + + DQ + R Sbjct: 312 EAVEMYQQALAVQQDLLGEH--HPDT--------LTTLNNLAVLYRDQNRLEEAQNLFER 361 Query: 165 IV---ERYTNSPYVKGARFYVTVGRNQLAAKEVEIG-RYYLKRGEYVAAIPRFQLVLANY 220 ++ ER + S + A + + +LA ++ R YL R + + Sbjct: 362 VLKERERLSGSEHPDVAIVLNNLAQLRLARSDLAGAERLYL----------RALELFVKF 411 Query: 221 --SDAEHAEEAMARLVEAYVALALMDEAREVVSL--------IQERYPQ 259 D + A+ L E +A E++ + E +P Sbjct: 412 LGPDHPNVATALNNLAELQRRSGNDQQAEELLKRALSLRQYALGENHPD 460 >gi|163738351|ref|ZP_02145766.1| Tetratricopeptide TPR_2 [Phaeobacter gallaeciensis BS107] gi|163742232|ref|ZP_02149620.1| hypothetical protein RG210_03438 [Phaeobacter gallaeciensis 2.10] gi|161384562|gb|EDQ08943.1| hypothetical protein RG210_03438 [Phaeobacter gallaeciensis 2.10] gi|161388272|gb|EDQ12626.1| Tetratricopeptide TPR_2 [Phaeobacter gallaeciensis BS107] Length = 280 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 23/61 (37%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ ++ A L + +A E F ++ +P + +A G ++AA Sbjct: 157 EQADFDAAKAALDSGAYQEAAEKFAAFTQAYPGSPLAAAVEYNRGKALDGLGDTREAARA 216 Query: 117 G 117 Sbjct: 217 Y 217 >gi|153003360|ref|YP_001377685.1| lytic transglycosylase catalytic subunit [Anaeromyxobacter sp. Fw109-5] gi|152026933|gb|ABS24701.1| Lytic transglycosylase catalytic [Anaeromyxobacter sp. Fw109-5] Length = 748 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 27/64 (42%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ A L L+ + A E Q + + A ++L A+ +AG +++A + Sbjct: 342 ADDALFFAAELDLRGGRRAVALERLEQVAARYATGNFAPEALFRLAWEHRTAGAHEEALA 401 Query: 116 LGEE 119 + Sbjct: 402 ALDR 405 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 30/100 (30%), Gaps = 14/100 (14%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + ++ + Y + A L+ G A+ R + Sbjct: 323 QDAVRTYEALAHEYPGHAFADDAL--------------FFAAELDLRGGRRAVALERLEQ 368 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 V A Y+ A EA+ RL + +EA + + Sbjct: 369 VAARYATGNFAPEALFRLAWEHRTAGAHEEALAALDRLDR 408 >gi|313676683|ref|YP_004054679.1| hypothetical protein [Marivirga tractuosa DSM 4126] gi|312943381|gb|ADR22571.1| tetratricopeptide domain protein [Marivirga tractuosa DSM 4126] Length = 278 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 25/62 (40%), Gaps = 3/62 (4%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 D + ++ +L ++ + KA E F + + P ++ A ++G+ Sbjct: 193 EDPNNEEALFNLGILSIQSGQYGKAIERFEKLLKRHPEN---VQAEFYLALSLMNSGQKA 249 Query: 112 QA 113 +A Sbjct: 250 KA 251 >gi|257458256|ref|ZP_05623406.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC 35580] gi|257444366|gb|EEV19459.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC 35580] Length = 137 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 1/76 (1%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-RKSLLMSAFVQYSAG 108 + + ++ +KA N+ A Y+ + FP A + A + Sbjct: 29 EIPEDSSPADLTQKAQEAFDSGNYRAARVYYEVILKRFPTDESACIAAQYEIAHLHIKKH 88 Query: 109 KYQQAASLGEEYITQY 124 +++ A ++ E+ I QY Sbjct: 89 QWKAAYAILEKIIAQY 104 >gi|126331490|ref|XP_001376771.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 439 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 10/108 (9%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDF-PFAGVAR--KSLLMSAFVQYSAGKYQQAASLGEEY 120 A L +N+ KA + + ++ + AG+++ A S + Sbjct: 187 AEKMLSNKNYKKAIRILLKARERAKEGGDMKMEGEAAYDLGLAYHKAGEFELAKSALNVF 246 Query: 121 ITQYPESKNVDYVYYLVGMSY-AQMIRDVPYDQRATKLMLQYMSRIVE 167 S +D +G+S + I V Q L ++ ++VE Sbjct: 247 SDI---SIALDDA---IGLSRAYEAIAKVLVSQENMLEALAFLEKVVE 288 >gi|113476439|ref|YP_722500.1| hypothetical protein Tery_2853 [Trichodesmium erythraeum IMS101] gi|110167487|gb|ABG52027.1| TPR repeat [Trichodesmium erythraeum IMS101] Length = 3172 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 41/106 (38%), Gaps = 22/106 (20%) Query: 71 QNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE- 126 ++A +Y+ + +F ++ A + + K+ +A + ++ P+ Sbjct: 2191 GKLNEAIKYYQKAIYLEPNFAWSYY------NLAELCFLLEKWDEAVNAYRRFMEIQPDF 2244 Query: 127 SKNVD----YVYYL-------VGMSYAQM-IRDVPYDQRATKLMLQ 160 S V+ + +SY + IR+ P D ++ + L+ Sbjct: 2245 SPEVEEKLNQALHQQVQGKLEQALSYYRQGIRNDPTDVKSYEKALE 2290 >gi|311257765|ref|XP_003127282.1| PREDICTED: serine/threonine-protein phosphatase 5-like [Sus scrofa] Length = 499 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 25/153 (16%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQ 104 + ++ E+ +A + K +++ A ++++Q P +SL Sbjct: 18 EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSL-----AY 72 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y A + I + Y+ YY S + + L+ Sbjct: 73 LRTECYGYALADATRAIEM-----DKKYIKGYYRRAASNMAL--------GKFRAALRDY 119 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 +V+ + A+ + K E Sbjct: 120 QTVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149 >gi|260462445|ref|ZP_05810652.1| TPR repeat-containing protein [Mesorhizobium opportunistum WSM2075] gi|259031641|gb|EEW32910.1| TPR repeat-containing protein [Mesorhizobium opportunistum WSM2075] Length = 593 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 44/136 (32%), Gaps = 15/136 (11%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 L + + A +F + R PF +L A + A S + + Sbjct: 466 GSARLLLGDAAGAIPFFVETERLSPFDLYRFHNLGELAAAYSFLEDWPSAISTADRSLDL 525 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 P Y Y S I + R + ++ ++ ++ R+ + + + ++ Sbjct: 526 SPG-----YFY-----SRFLKIGALARSGRK-QEAMRELAILMTRHPD--FSEQRVRWIP 572 Query: 184 VGRNQLAAKEVEIGRY 199 AA E I + Sbjct: 573 FVDK--AANEFLIANF 586 >gi|225620550|ref|YP_002721807.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] gi|225215369|gb|ACN84103.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] Length = 767 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 64/190 (33%), Gaps = 56/190 (29%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-------SAFVQYSAGKYQQ 112 +Y K + ++ + + A YF + A+K + ++ +Y + Sbjct: 44 LY-KGQVCVELKEYEDAVRYFEE----------AKKVDIKTFKSYNLLGISYHAIKQYDK 92 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A E + P S Y L+G+SY + + ++ ++ +E Sbjct: 93 AIECFNETLKITPNSFK---AYNLLGISYFEK--------KDYTNAIENFNKAIEINP-- 139 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 N LA +Y K +Y AI F+ ++ +E R Sbjct: 140 --------KYDKAFNNLA-------LFYYKNKKYNEAIEFFEH-------SKSLDE---R 174 Query: 233 LVEAYVALAL 242 + +AY L + Sbjct: 175 VFKAYDMLGM 184 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 36/257 (14%), Positives = 69/257 (26%), Gaps = 70/257 (27%) Query: 69 KEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 + + KA YFN+ + + K+ A Y+ Y A + I Sbjct: 324 SNEEYDKAINYFNKSIEINDRY------YKAYNNLALAYYNLKDYNNAIENFNKSIDINN 377 Query: 126 ESKNVDYVYYLVGMSY--------------------------AQMIRDVPYDQRATKLML 159 + + Y +G+SY +++ + YD L Sbjct: 378 NNADS---YNGIGLSYYHLGEKEKSLIYLNKALELNPSYSNSYEILFSIYYDLEEYDNAL 434 Query: 160 QYMSRIVERYTNS---------------------PYVKGARFYVTVGRNQLAAKEVEIGR 198 +I+E NS Y N LA Sbjct: 435 NIADKIIEVNPNSFKYYDKLLSICFDNKDHNKVIEYASRTDKRNDDIYNMLAES------ 488 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM---ARLVEAYVA-LALMDEAREVVSLIQ 254 Y + +Y ++ + ++ N + + L + Y L + L + Sbjct: 489 -YYRIKDYDSSSICYNKLIENKKSSFELYNNLAVIYYLKKDYDMLLNTYQRYIDNFDLKE 547 Query: 255 ERYPQGYWARYVETLVK 271 + + TL+K Sbjct: 548 DNFASYNIFLLSYTLLK 564 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 22/109 (20%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + + ++++++ A E FN+ P K+ A Y KY +A E Sbjct: 115 GISYFEKKDYTNAIENFNKAIEINP--KY-DKAFNNLALFYYKNKKYNEAIEFFEH---- 167 Query: 124 YPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 SK++D Y ++GMSY I + ++ ++ ++ Sbjct: 168 ---SKSLDERVFKAYDMLGMSYYN-INNYD-------KAIECFTKFLQY 205 >gi|168068003|ref|XP_001785887.1| predicted protein [Physcomitrella patens subsp. patens] gi|162662441|gb|EDQ49296.1| predicted protein [Physcomitrella patens subsp. patens] Length = 261 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 50/150 (33%), Gaps = 23/150 (15%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLL--MS 100 +D+ + E +E + L+++ + A +Y + A + + Sbjct: 119 KDLQDQVRSGEASSEEFFELGAVMLRKKYYVLANKYLEQAIKKWD--GDEADLAQVYNAL 176 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLM 158 F + K +A +L E+ + P Y +Y +G Y +V D K Sbjct: 177 GFSYFRDNKLDEAINLFEKAVKLRPG-----YVIAWYNLGNVY-----EVKKD---FKNA 223 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 L+ + N+ A+ + + Sbjct: 224 LKAYEESLLFDPNNK---IAQRRRDAIKER 250 >gi|163738509|ref|ZP_02145924.1| Tetratricopeptide TPR_2 [Phaeobacter gallaeciensis BS107] gi|161388430|gb|EDQ12784.1| Tetratricopeptide TPR_2 [Phaeobacter gallaeciensis BS107] Length = 189 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 16/127 (12%), Positives = 41/127 (32%), Gaps = 20/127 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLG 117 + ++ L+ + A E+ + P G ++ ++AG + A + Sbjct: 72 LLKRGKDALERGDTRIAIEHLTALTDHAPGFATGWYERAR-----AYFTAGLFGPAVADL 126 Query: 118 EEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 E+ + P DY + +G + + D + + R + + + Sbjct: 127 EQTLMLNPN----DYNAIFALG-AMFEQFNDP-------QNAYEAYKRAQAIHPHHEAIT 174 Query: 177 GARFYVT 183 A + Sbjct: 175 NALDRLK 181 >gi|119489751|ref|ZP_01622509.1| hypothetical protein L8106_10407 [Lyngbya sp. PCC 8106] gi|119454325|gb|EAW35475.1| hypothetical protein L8106_10407 [Lyngbya sp. PCC 8106] Length = 276 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 13/82 (15%) Query: 64 AVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE- 119 + + + A + + D P +L Y GKY QA + E+ Sbjct: 104 GEAYFRNGKYQAAIDQIEAGLKVRSDVPG------ALFDLGNAYYMLGKYDQAIAQYEKA 157 Query: 120 YIT---QYPESKNVDYVYYLVG 138 + +P N+ V+Y G Sbjct: 158 FAQEKNLWPAINNIGLVHYERG 179 >gi|91203286|emb|CAJ72925.1| hypothetical protein kustd2180 [Candidatus Kuenenia stuttgartiensis] Length = 408 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 62/202 (30%), Gaps = 40/202 (19%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + Y + + + + + KA + R++ + + + G Y Sbjct: 228 SEEAFYGEGIFLIGNEEYEKAISLLEKAITKDRNYAH------AYFQIGYCKNKLGNYPD 281 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A ++ + PE ++ +GM+Y Q+ K ++ + V N+ Sbjct: 282 AIKNLKQAVRLKPEFPEG---HFQLGMAYFM--------QKQYKGAVESLLDAVRS--NA 328 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 + A F + + L I Y AI + V E Sbjct: 329 QFF-EAYFMLGLAYTALERHRDAI-------EAYWQAIGINKDV----------PEVHFH 370 Query: 233 LVEAYVALALMDEAREVVSLIQ 254 L AY+ A E +++ Sbjct: 371 LGMAYLQTKNKLMAYEEYKVLK 392 Score = 35.9 bits (82), Expect = 6.2, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 46/140 (32%), Gaps = 22/140 (15%) Query: 32 VCFLVGWERQSSRDVYLDSV--TDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRD 86 FL+G E L+ D Y ++ K N+ A + + + Sbjct: 236 GIFLIGNEEYEKAISLLEKAITKDRNYAHAYFQIGYCKNKLGNYPDAIKNLKQAVRLKPE 295 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 FP L A+ + +Y+ A + + + Y+++G++Y + R Sbjct: 296 FPEGHF----QLGMAY--FMQKQYKGAVESLLDAVRSNAQFFE---AYFMLGLAYTALER 346 Query: 147 DVPYDQRATKLMLQYMSRIV 166 + ++ + + Sbjct: 347 H--------RDAIEAYWQAI 358 >gi|29169122|gb|AAO66300.1| hypothetical TPR-like protein [Myxococcus xanthus] Length = 370 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 25/68 (36%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V D D E++ +F +A YF + FP + R +L + Sbjct: 38 VTADLELDKLNDEELFAGGTSAFAANDFQQAARYFGRLVDFFPDSRHRRAALYNAGLAHQ 97 Query: 106 SAGKYQQA 113 ++++A Sbjct: 98 RIKEWEEA 105 >gi|54295678|ref|YP_128093.1| hypothetical protein lpl2766 [Legionella pneumophila str. Lens] gi|53755510|emb|CAH17009.1| hypothetical protein lpl2766 [Legionella pneumophila str. Lens] Length = 278 Score = 41.6 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 8/70 (11%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A + ++ +A + FN+ + GKY++A ++ + Sbjct: 56 AASAAYRAGDYEQAAKLFNELK--------TEQGYYNQGNALAHLGKYEEAIRAYDKALA 107 Query: 123 QYPESKNVDY 132 P +++ Y Sbjct: 108 FNPNNQDALY 117 >gi|302341691|ref|YP_003806220.1| hypothetical protein Deba_0249 [Desulfarculus baarsii DSM 2075] gi|301638304|gb|ADK83626.1| hypothetical protein Deba_0249 [Desulfarculus baarsii DSM 2075] Length = 188 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 26/72 (36%), Gaps = 7/72 (9%) Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A + E I+ +P+S +L G++ + + + ++ E Y S Sbjct: 124 ALNHLERVISLHPKSAAAAEAVFLRGVAGYRQSAQALH-------LKSAYRKLTEEYPTS 176 Query: 173 PYVKGARFYVTV 184 + AR Y Sbjct: 177 VWAGRARPYKNF 188 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 1/68 (1%) Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMDEAREVVSLIQE 255 ++ + ++ A+ + V++ + + A EA+ A Y A + + E Sbjct: 112 AKFEMLERRWLGALNHLERVISLHPKSAAAAEAVFLRGVAGYRQSAQALHLKSAYRKLTE 171 Query: 256 RYPQGYWA 263 YP WA Sbjct: 172 EYPTSVWA 179 >gi|148906849|gb|ABR16570.1| unknown [Picea sitchensis] Length = 441 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 55/178 (30%), Gaps = 36/178 (20%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD----- 86 VC L G R R ++ ++A L N+S+A + Q + Sbjct: 270 VCQLCGCGRNEEETKK-----QARKVDKLGKEASKLLSSGNYSEARSLYEQIQQLQTQLW 324 Query: 87 FPFAGVARKSLLMSAFVQYS----AGKYQQAAS----LGEEYITQYPE-SKNVDYVYYLV 137 P++ + LL + ++QA Y YP ++ Sbjct: 325 HPYSVI----LLRTGDTLLKICMELYDWKQALKYCRLTIPAYERAYPTCHP-------MM 373 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-----NSPYVKGARFYVTVGRNQLA 190 G+ Y + + + T L + + + T NS ++ + + A Sbjct: 374 GLQYYACGK-LEWFLENTLEALNFFEKAAKILTVTHGRNSEFLTQLFDRIQEAHAEAA 430 >gi|119485998|ref|ZP_01620060.1| hypothetical protein L8106_05740 [Lyngbya sp. PCC 8106] gi|119456773|gb|EAW37901.1| hypothetical protein L8106_05740 [Lyngbya sp. PCC 8106] Length = 807 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 1/64 (1%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E + LK++ + KA + + P ++ + Q+A +L + + Sbjct: 23 ETGLAALKQKQYQKAITHLEAIAESQPHRSAGMRAKMALVVAYERTRNLQKAIALCQN-L 81 Query: 122 TQYP 125 TQ+P Sbjct: 82 TQHP 85 >gi|120437826|ref|YP_863512.1| TPR repeat-containing protein [Gramella forsetii KT0803] gi|117579976|emb|CAL68445.1| secreted protein containing tetratricopeptide repeats [Gramella forsetii KT0803] Length = 594 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 43/120 (35%), Gaps = 8/120 (6%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 +++N +A + + + + ++LL A + ++ A + I + + Sbjct: 478 AFQKKN-GEAIKALDSILINHKGEKIEDEALLSQAKLYEKEEDFKSAEKNYQIIIHNFND 536 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 D +Y + YA ++D +I+ + +S Y AR + R Sbjct: 537 DILADNAHYFLAELYANQLQDPER-------AKSLYEQIIFNFADSIYFVEARKKYRMLR 589 >gi|301610321|ref|XP_002934687.1| PREDICTED: LOW QUALITY PROTEIN: WD and tetratricopeptide repeats protein 1-like [Xenopus (Silurana) tropicalis] Length = 664 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 13/115 (11%), Positives = 36/115 (31%), Gaps = 21/115 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYS---AGKYQQAASL 116 +KA Q +S+A E +++ + P + ++L A G + A Sbjct: 353 QKANDAFARQQWSQAIELYSEAVQRAPGS-----AMLYGNRAAAYMKRKWDGDHYDALRD 407 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + + P ++ + ++ L+ + ++ + Sbjct: 408 CLQALALNPAHLK---AHFRLARCLFELH--------YVSEALECLEEFKVKFPD 451 >gi|115373453|ref|ZP_01460750.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca DW4/3-1] gi|115369459|gb|EAU68397.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca DW4/3-1] Length = 216 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 37/128 (28%), Gaps = 13/128 (10%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESK 128 + A + + P + + L A + + Y Q ++ S Sbjct: 25 NDLRGAIDQLTAALQRNP----PQGAELHYQVAKLYFELADYAQCELEATRLAERFATSA 80 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 VD +L + M + + + + + R+ +S A + R + Sbjct: 81 YVDDALFLRAQAIQMM-------EGRRQEASRAYADLRTRFPDSELAAHATVEMGRLRAE 133 Query: 189 LAAKEVEI 196 E I Sbjct: 134 AGENEKAI 141 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 10/78 (12%), Positives = 30/78 (38%), Gaps = 1/78 (1%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL-ALMDEARE 248 A ++ + Y + +Y + ++ + + ++A+ +A + EA Sbjct: 46 AELHYQVAKLYFELADYAQCELEATRLAERFATSAYVDDALFLRAQAIQMMEGRRQEASR 105 Query: 249 VVSLIQERYPQGYWARYV 266 + ++ R+P A + Sbjct: 106 AYADLRTRFPDSELAAHA 123 >gi|86741850|ref|YP_482250.1| hypothetical protein Francci3_3164 [Frankia sp. CcI3] gi|86568712|gb|ABD12521.1| hypothetical protein Francci3_3164 [Frankia sp. CcI3] Length = 233 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 46/111 (41%), Gaps = 14/111 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + + L + + A + P + R++ A Q++AG+Y A Sbjct: 119 YTRGMALLGHGDANAAVQLLAHAVAAEPASPSVREA---LARAQFTAGQYGAARETFAWI 175 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + ++P DY + +G+S A+ I D+ + +++++ V + Sbjct: 176 VDRHPTD---DYAQFGLGLS-ARKIGDL-------RAAVEHLALAVAMRPD 215 >gi|154152113|ref|NP_001093815.1| prolyl 3-hydroxylase 2 [Bos taurus] gi|151556332|gb|AAI48130.1| LEPREL1 protein [Bos taurus] gi|296491295|gb|DAA33358.1| prolyl 3-hydroxylase 2 [Bos taurus] Length = 706 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 31/68 (45%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P+ ++V L + Y + + D A+ + Sbjct: 312 FAYYRVGEYIKALECAKAYLLLHPDDEDV-----LDNVDYYESLLGDSADP-ASIEARED 365 Query: 162 MSRIVERY 169 ++ V+R+ Sbjct: 366 LAMFVKRH 373 >gi|262199647|ref|YP_003270856.1| hypothetical protein Hoch_6494 [Haliangium ochraceum DSM 14365] gi|262082994|gb|ACY18963.1| hypothetical protein Hoch_6494 [Haliangium ochraceum DSM 14365] Length = 823 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 64/186 (34%), Gaps = 34/186 (18%) Query: 100 SAFVQ--YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 Q + G Y AA + +Y+ +P S++ + + S + + Sbjct: 85 LIDAQVAHGTGDYDTAAVMLYDYVESHPRSRSYASALFYLADSLFERGDHL--------A 136 Query: 158 MLQYMSRIVERY-TNSPYVKGARFYVTVGRNQLA-AKEVEIGRY---------------- 199 + ++ R +S + + + LA + ++ R+ Sbjct: 137 ARERFVELLTRIGPHSSFYQQTLERLIEL--SLALRDDTDVARWLAALDQVPAERLRPSV 194 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAE----HAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + RG+Y R Q + +++ + +A L AYVA ++ A V + Sbjct: 195 HYVRGKYAYFRDRHQQAIDHFARVPIPAEYFFQARYFLGGAYVAQGNLELAEAVYRDLVA 254 Query: 256 RYPQGY 261 R P+G Sbjct: 255 RPPRGK 260 >gi|94968710|ref|YP_590758.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94550760|gb|ABF40684.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 942 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 25/69 (36%), Gaps = 3/69 (4%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A + + N+ A + +P V R + + KY QA + ++ + Sbjct: 792 ARVLRSDGNYDGAAQELQAVLAQYPKDRVVRN---DLGRIYFLQRKYDQAIAELQQVMEV 848 Query: 124 YPESKNVDY 132 PE +Y Sbjct: 849 DPEDLQANY 857 Score = 35.9 bits (82), Expect = 7.0, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 36/135 (26%), Gaps = 36/135 (26%) Query: 152 QRATKLMLQYMSRIVERYTNSPY-----------------VKGARFYVTVGRNQLAAKEV 194 Q K ++ E N+P + LA Sbjct: 730 QGDLKGAAAAFVKVTEADPNNPDGWVNLGRVAVQEGDMERAREVLTKALKINANLAR--- 786 Query: 195 EIGRYYLKR-----GEYVAAIPRFQLVLANYSDAEHAEEAM---ARLVEAYVALALMDEA 246 R++ R G Y A Q VLA Y + L Y + E Sbjct: 787 --ARFFYARVLRSDGNYDGAAQELQAVLAQYPKDRVVRNDLGRIYFLQRKYDQ--AIAEL 842 Query: 247 REVVSL----IQERY 257 ++V+ + +Q Y Sbjct: 843 QQVMEVDPEDLQANY 857 >gi|20088978|ref|NP_615053.1| hypothetical protein MA0079 [Methanosarcina acetivorans C2A] gi|19913828|gb|AAM03533.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans C2A] Length = 845 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 63/190 (33%), Gaps = 46/190 (24%) Query: 66 LFLKEQN---FSKAYEYFNQCSRDFPFAGVAR----KSLLMSAFVQYSAGKYQQAASLGE 118 L N + K + F++ P A +L++ +Y++A + + Sbjct: 549 DLLDSGNVTIYKKLLKAFDKILDLNPEDEYALSRKGNALIIL-------ERYEEATEVLD 601 Query: 119 EYITQYPESKNVDYVYYLVG--MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + PE + Y G +++ + + ++ ++++ + Y Sbjct: 602 SILDLNPEDE---YALLRKGYVLNHLER----------YEEAVEVFTKLLNLNPENEYA- 647 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 L+ K G Y AI F V S+ E+ L+EA Sbjct: 648 ------------LSGK----GHTLFSLERYEEAIEMFVKVKNITSNESFKFESTLELIEA 691 Query: 237 YVALALMDEA 246 Y++L + A Sbjct: 692 YLSLDQVAGA 701 Score = 35.9 bits (82), Expect = 6.0, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 8/100 (8%) Query: 49 DSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 D + D+ + E + K + + + +A E + P A LL +V Sbjct: 567 DKILDLNPEDEYALSRKGNALIILERYEEATEVLDSILDLNPEDEYA---LLRKGYVLNH 623 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 +Y++A + + + PE++ Y G + + R Sbjct: 624 LERYEEAVEVFTKLLNLNPENE---YALSGKGHTLFSLER 660 >gi|218261921|ref|ZP_03476589.1| hypothetical protein PRABACTJOHN_02260 [Parabacteroides johnsonii DSM 18315] gi|218223697|gb|EEC96347.1| hypothetical protein PRABACTJOHN_02260 [Parabacteroides johnsonii DSM 18315] Length = 228 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 10/69 (14%), Positives = 22/69 (31%), Gaps = 3/69 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A + ++++ KA E + + A Y K A E + Sbjct: 45 KEAEVAYTKEDYGKAIELYEGLLKTH--GESAE-IYYNLGNAYYKENKIAPAILNYERAL 101 Query: 122 TQYPESKNV 130 P ++ Sbjct: 102 LLDPGDGDI 110 >gi|196233636|ref|ZP_03132477.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] gi|196222306|gb|EDY16835.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] Length = 752 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 15/117 (12%), Positives = 34/117 (29%), Gaps = 18/117 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + + +A + F + + P A ++ G++ +A + + Sbjct: 78 FNLGNALSELGRMEEAADAFGRATELQP--DYA-QAHHNLGSALAKRGRFDEAIAAFQRA 134 Query: 121 ITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 I P DY Y +G++ R D L + + + Sbjct: 135 IELKP-----DYASAYNNLGLALKAQAR---RD-----EALAAFQQAIALQPDHAEA 178 >gi|168214778|ref|ZP_02640403.1| tetratricopeptide repeat protein [Clostridium perfringens CPE str. F4969] gi|170713792|gb|EDT25974.1| tetratricopeptide repeat protein [Clostridium perfringens CPE str. F4969] Length = 475 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 47/144 (32%), Gaps = 14/144 (9%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAF---- 102 +++ +++Y K KE+ + A + F + + F+ S L + Sbjct: 340 ENLMKTDGVKDLYLKGSDLFKEKKYEDALKDFEKA---YAFSS---DSYLRPHLIYFMGT 393 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + K +A +EY+ Y + + Y + + + +Y Sbjct: 394 SYENLDKNTEAIKYFQEYLKDYKAKPDAEDFMY-TPQCLYNLAILYNK-EGNSAESKKYA 451 Query: 163 SRIVERYTNSPYVKGARFYVTVGR 186 I Y N+ + + G+ Sbjct: 452 QEIENDYPNTMFYNDVTKKIIYGK 475 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 6/73 (8%) Query: 200 YLKRGEYVAAIPRFQLVLANY---SDAE---HAEEAMARLVEAYVALALMDEAREVVSLI 253 Y + AI FQ L +Y DAE + + + L Y E+++ I Sbjct: 395 YENLDKNTEAIKYFQEYLKDYKAKPDAEDFMYTPQCLYNLAILYNKEGNSAESKKYAQEI 454 Query: 254 QERYPQGYWARYV 266 + YP + V Sbjct: 455 ENDYPNTMFYNDV 467 >gi|113478145|ref|YP_724206.1| TPR repeat-containing serine/threonine protein kinase [Trichodesmium erythraeum IMS101] gi|110169193|gb|ABG53733.1| serine/threonine protein kinase with TPR repeats [Trichodesmium erythraeum IMS101] Length = 738 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 74/253 (29%), Gaps = 65/253 (25%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 +D Y+ Y++A+++ + N KA Q R P ++ + Sbjct: 403 KDYTAGIKIKANYEDAYYQRALVYYELDNKDKAMTDLTQTLRINP--NYT-QAYKKRGLI 459 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNV-------------------DY------------ 132 Y G Y+ A E I P+ DY Sbjct: 460 YYEIGDYKSAIQDYSESIRLNPKDSKTYINRGIARGALEDQVGAISDYTQAIKLNPNDVK 519 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN---------SPYVKGAR---- 179 YY G S +M+ + ++ ++ +E + S Y+ Sbjct: 520 AYYYRGKSLFKMLD--------YQGAIENYNQFLEVKPDDADAYTNRCSAYLHKGNDSSA 571 Query: 180 ----FYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV--LANYSDAEHAEEAMA 231 ++ LA + I Y GEY A + + + + A+A Sbjct: 572 IADCQQAIEINPQDFLAYHNLCIA--YFNLGEYQRATENCSIAIGIDKNNAKAYTNRALA 629 Query: 232 RLVEAYVALALMD 244 + Y+ A+ D Sbjct: 630 QSARGYLQEAIKD 642 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 51/168 (30%), Gaps = 39/168 (23%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + +Y+K K+ A + + + P +K+ + Y G + Sbjct: 349 QTLYKKGQELAKQGKQQAAIANYTEALKLNP-----KKASI-----YYKRGNSYYSHRSY 398 Query: 118 EEYITQYPES----KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 E+ I Y N + YY + Y ++ + +++ + N Sbjct: 399 EKAIKDYTAGIKIKANYEDAYYQRALVYYELDNK--------DKAMTDLTQTLRINPN-- 448 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 Y + + G Y + G+Y +AI + + Sbjct: 449 YTQAYKKR---------------GLIYYEIGDYKSAIQDYSESIRLNP 481 >gi|37523706|ref|NP_927083.1| hypothetical protein gll4137 [Gloeobacter violaceus PCC 7421] gi|35214711|dbj|BAC92078.1| gll4137 [Gloeobacter violaceus PCC 7421] Length = 379 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 68/206 (33%), Gaps = 43/206 (20%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ + +A +++ A +N+ R +P ++L A + Q A + Sbjct: 46 EAQQRFNEAGAKADRGDYAGAIADYNEAIRLYP--QY-YQALGKRADTRLKIEDLQGAVA 102 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS-PY 174 + + YP VY+ + +Y ++ + Y ++ Y Sbjct: 103 DYKAMLRVYPNDIG---VYHNLAKAYFKL----------------------KNYPDTVIY 137 Query: 175 VKGARFY---VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 A + R A R +++GE+ A+ + +L N + +A Sbjct: 138 TGEALNRNPGMIDVRQLRA-------RALVRQGEFARAVADYNEILQNQPEEAAV---LA 187 Query: 232 RLVEAYVALALMDEA-REVVSLIQER 256 AY L A + + +Q Sbjct: 188 DRARAYQRLGDYPRAFDDFNAALQLN 213 >gi|119384566|ref|YP_915622.1| TPR repeat-containing protein [Paracoccus denitrificans PD1222] gi|119374333|gb|ABL69926.1| TPR repeat-containing protein [Paracoccus denitrificans PD1222] Length = 245 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 20/159 (12%), Positives = 46/159 (28%), Gaps = 14/159 (8%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 +F +A W R + + + S + +Y++ L + A + + Sbjct: 93 LLFAELAQPGGETWARAETDILRIWSRSGSAAMDLLYKRGEAALDAGDTVTALGHLTALT 152 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 P A L S Y G A + E + +G ++ Sbjct: 153 DHAP--DFAAGWYLRSV-AFYLDGDLGPAIADLGEVLRLELRHFG---ALTQLGTMLEEL 206 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 D + L+ + ++ + + + A + Sbjct: 207 GDD--------RNALEAFRQSLKIHPHQQEAQDAVRRLE 237 >gi|329930344|ref|ZP_08283933.1| tetratricopeptide repeat protein [Paenibacillus sp. HGF5] gi|328935070|gb|EGG31556.1| tetratricopeptide repeat protein [Paenibacillus sp. HGF5] Length = 560 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 73/203 (35%), Gaps = 29/203 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +++AV L + KA +YF + P V A + G Y+ + + Sbjct: 7 FDRAVRSLDRYQYDKALKYFRKAVEYEPDNPVNH---CNMAGILSETGDYKASNDVLAHI 63 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + Q + Y+ + +YA M + + + +E N ++ A Sbjct: 64 LEQ--VDPLMTECYFYMANNYANM--------EQFEKAEEALVTYLEEDPNGQFLDEAEE 113 Query: 181 YVTVGR---------NQLAAKEVEI----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 + + N++ ++E + R L+ G++ A+ + ++ + D A Sbjct: 114 MMELLHYELNRPAKLNRIKSREGVVEHEHARALLEEGKFAQAVKLLEEIVKDNPDFLAAR 173 Query: 228 EAMARLVEAYVALALMDEAREVV 250 +A AY + D A+ + Sbjct: 174 NNLAL---AYYYMGRFDTAKRTI 193 >gi|325860313|ref|ZP_08173435.1| tetratricopeptide repeat protein [Prevotella denticola CRIS 18C-A] gi|325482192|gb|EGC85203.1| tetratricopeptide repeat protein [Prevotella denticola CRIS 18C-A] Length = 851 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 7/65 (10%), Positives = 20/65 (30%), Gaps = 8/65 (12%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYP 125 ++ N+++A + + + + + L Y A E P Sbjct: 633 YQKGNYAQAVKGYEKLLKQ------GESAALYYNLGNSYYRLDNIPHAVLSYERAQRLAP 686 Query: 126 ESKNV 130 +++ Sbjct: 687 GDEDI 691 >gi|319650526|ref|ZP_08004666.1| YvcD protein [Bacillus sp. 2_A_57_CT2] gi|317397707|gb|EFV78405.1| YvcD protein [Bacillus sp. 2_A_57_CT2] Length = 499 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 24/120 (20%) Query: 57 QREVYEK---------AVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQY 105 E+YE+ A L+ +F KA E N ++P ++ A + Sbjct: 144 DDELYEQDDLITKQEHARELLESGHFPKAVEILNSVIDEYPEYWSAYN-----NLALAYF 198 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 G+ Q+AA + E+ + + P + L + + D R +L+ + + +I Sbjct: 199 YLGEVQKAADILEKVLEENPGN--------LHALCNKLVFAFYERDFRQVRLLKEALKKI 250 >gi|262172999|ref|ZP_06040676.1| TPR domain protein in aerotolerance operon [Vibrio mimicus MB-451] gi|261890357|gb|EEY36344.1| TPR domain protein in aerotolerance operon [Vibrio mimicus MB-451] Length = 636 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 40/128 (31%), Gaps = 17/128 (13%) Query: 14 AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL----- 68 A + + AL + L +S + D ++ + Y +A Sbjct: 312 AALFMFRRGALFTVVLLIGASLPNQHAWASPWLNQDQQAMRDFESKQYSQAAEEFSDPRW 371 Query: 69 ------KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 ++ A + F+Q P + A AG +A SL E+ + Sbjct: 372 QGAARYNAGDYQGAIDAFSQVDN--P----DLDTQYNLANAYAQAGDLSKARSLYEQVLE 425 Query: 123 QYPESKNV 130 + P ++ Sbjct: 426 KEPNHQDA 433 >gi|189184574|ref|YP_001938359.1| TPR repeat-containing protein 08 [Orientia tsutsugamushi str. Ikeda] gi|189181345|dbj|BAG41125.1| TPR repeat-containing protein 08 [Orientia tsutsugamushi str. Ikeda] Length = 357 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 73/214 (34%), Gaps = 35/214 (16%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y K + + + +A + ++ + + K+ + G+YQ+A Sbjct: 174 NAYYNKGIALNELGRYQEAIDNYDIAIK---YKPDLAKAYINKGNALNELGRYQEAIENF 230 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + I P + YY G+S Q+++ + ++ ++ + Sbjct: 231 DTGIRYNPNDEK---AYYNKGISLYQLVQ--------YQEAIENCDIAIKHKPD------ 273 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 LA + G K G++ AI +F L + EA E+ Sbjct: 274 -----------LAEAYMNKGVALSKLGQHQEAIKKFNLAIKYKPG---FAEAYLNKGESL 319 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 L ++A + + +Y G A Y+ ++K Sbjct: 320 KQLGQREKAIKNFE-LAIKYKPGLIAPYIRDILK 352 Score = 35.5 bits (81), Expect = 7.8, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 31/170 (18%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + + K F + + + +A + FN + P++ ++ + G++Q+A Sbjct: 4 DKYFNKGNSFFQLRKYQEAIKKFNLAIKCNPYSA---EAYINKGIALDKLGQHQEAIENY 60 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + I P+S Y G+S Q+ + ++ ++ +S Sbjct: 61 DIAIKYKPDSVE---AYINKGISLKQL--------GQYQDAIKNYDIAIKYKPDSAEA-- 107 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 A E+ G+Y AI + + + D+ A Sbjct: 108 ------YINKGAALNEL---------GQYQEAIENYDIAIKYKPDSAEAY 142 >gi|118087005|ref|XP_419224.2| PREDICTED: similar to aspartyl(asparaginyl)beta-hydroxylase; HAAH [Gallus gallus] Length = 885 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 39/127 (30%), Gaps = 19/127 (14%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-------------FAGVARKSLLM 99 D + E+ + A K+ +A + +P F K+ L Sbjct: 416 DKTIKAEL-DAAEKLRKKGKVEEALRAYEALVNQYPEIKKKKKPKLLNKF-DKTIKAELD 473 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 +A GK ++A E + QYPES Y S + + + + Sbjct: 474 AAEKLRKKGKVEEALRAFEALVNQYPESPR---ARYGKAQSEDDLAEKM-RSNEMLQKAI 529 Query: 160 QYMSRIV 166 +V Sbjct: 530 NTYDEVV 536 >gi|255536648|ref|YP_003097019.1| conserved hypothetical protein, TPR domain protein [Flavobacteriaceae bacterium 3519-10] gi|255342844|gb|ACU08957.1| conserved hypothetical protein, TPR domain protein [Flavobacteriaceae bacterium 3519-10] Length = 456 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 20/114 (17%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAASLGE 118 YE + +N+ +A F+ P + A K+ + A G++ +A ++ E Sbjct: 201 YEYGQFYFNRKNYEEAIRGFDYLLAINPQSVGVYANKAACLEA-----MGEWLKAIAVYE 255 Query: 119 EYITQ-YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 E + Y +S + YY +G+ Y + + L LQ + + Sbjct: 256 EMLELEYTKS----FTYYKIGLCYKENKQQT--------LALQAFQKSLRDDPQ 297 >gi|190575665|ref|YP_001973510.1| putative transmembrane TPR repeat-containing protein [Stenotrophomonas maltophilia K279a] gi|190013587|emb|CAQ47222.1| putative transmembrane TPR repeat protein [Stenotrophomonas maltophilia K279a] Length = 614 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 19/65 (29%), Gaps = 8/65 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 V + +F+ A + F D A G Y +A + + + Sbjct: 372 ADGVQAYRAGDFATARKQFEGIDSDA--GWY------NLANTLARQGSYDEAIAAYDRAL 423 Query: 122 TQYPE 126 +P Sbjct: 424 ALHPG 428 >gi|188994389|ref|YP_001928641.1| probable aerotolerance-related exported protein BatE [Porphyromonas gingivalis ATCC 33277] gi|188594069|dbj|BAG33044.1| probable aerotolerance-related exported protein BatE [Porphyromonas gingivalis ATCC 33277] Length = 302 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 44/155 (28%), Gaps = 25/155 (16%) Query: 16 AYQLYKFALTIFFSIAVCFL-----------------VGWERQSSRDVYLDSVTDVRYQR 58 + L +F SI V ++ +V +S D Sbjct: 6 LRHIAVLPLILFLSIGSLLSLQAQNQDTSIRRSVFLPVDSSSIATSEVETESAADSSATG 65 Query: 59 EV--YEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 ++ E+ + + +A + + P A + L Y +G+ + Sbjct: 66 KILSAEEIRRLFDAKQYGRAATAYERILRETAQPDASL----LYNLGCCYYKSGEVALSI 121 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + E P K++ + G+ I D Sbjct: 122 LMFERAYRLAPNDKDIRVNLEMAGLKAFDKISDSE 156 >gi|27380929|ref|NP_772458.1| hypothetical protein bll5818 [Bradyrhizobium japonicum USDA 110] gi|27354095|dbj|BAC51083.1| bll5818 [Bradyrhizobium japonicum USDA 110] Length = 307 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 32/112 (28%), Gaps = 14/112 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + + ++ KA F+Q P A K+ G+Y+ A ++ I Sbjct: 97 NRGNAYTAKGDYDKAIRDFDQSIALKPT--YA-KAFNNRGVAYLRKGEYELAIEAFDDAI 153 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 P DYV + + + + +S Sbjct: 154 KLDP-----DYV------AAFVNRAGAYLKKNDHQRAAHDYDEAIRLQPDSQ 194 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 3/87 (3%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 RD Y + + V +L++ + A E F+ + P + + A Sbjct: 113 RDFDQSIALKPTYAKAFNNRGVAYLRKGEYELAIEAFDDAIKLDP--DYVA-AFVNRAGA 169 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNV 130 +Q+AA +E I P+S+ Sbjct: 170 YLKKNDHQRAAHDYDEAIRLQPDSQAA 196 >gi|186685791|ref|YP_001868987.1| hypothetical protein Npun_F5744 [Nostoc punctiforme PCC 73102] gi|186468243|gb|ACC84044.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102] Length = 280 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 18/172 (10%), Positives = 47/172 (27%), Gaps = 33/172 (19%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR-------EVYEKAVLFLKEQNFS 74 F + IF ++ V + S V V+ + E Y + + Sbjct: 17 FTIAIFTTLTAISSVSCSKNDSVLVTEIGVSTPSRRSATASRGGEFYLQGKNQHLNGDLQ 76 Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASLGEEYITQYPESKN 129 A +++ +++ S +A+ + G ++A + + + P Sbjct: 77 AAIASYSK--------AISQNSQYGAAYNGRGLAYFDLGDKEKAIADYNQALRINPNDAE 128 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + + + ++ S + N Y + Sbjct: 129 A-----------YNNLGNARASLEGNREAVKDYSEAIRLNPN--YAEAYNNR 167 >gi|327313512|ref|YP_004328949.1| hypothetical protein HMPREF9137_1254 [Prevotella denticola F0289] gi|326946194|gb|AEA22079.1| tetratricopeptide repeat protein [Prevotella denticola F0289] Length = 851 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 7/65 (10%), Positives = 20/65 (30%), Gaps = 8/65 (12%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYP 125 ++ N+++A + + + + + L Y A E P Sbjct: 633 YQKGNYAQAVKGYEKLLKQ------GESAALYYNLGNSYYRLDNIPHAVLSYERAQRLAP 686 Query: 126 ESKNV 130 +++ Sbjct: 687 GDEDI 691 >gi|303239588|ref|ZP_07326113.1| Tetratricopeptide TPR_2 repeat protein [Acetivibrio cellulolyticus CD2] gi|302592759|gb|EFL62482.1| Tetratricopeptide TPR_2 repeat protein [Acetivibrio cellulolyticus CD2] Length = 375 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 23/182 (12%), Positives = 61/182 (33%), Gaps = 47/182 (25%) Query: 5 LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64 L + + I + Q Y A + ++ L G + ++ L + +E++ + Sbjct: 240 LTKLLEIDKLVLEQNYVAAADMLAALNAAELKG--IEKAKYDSLRGQAMEKAAKEIFTQG 297 Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 K++ F +A E F++ +V G+++ + + Sbjct: 298 RELYKKKQFKEALEKFDKV----------------VLYV----GEWKNSNATT------- 330 Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 Y G+ Y ++ D L+ ++ +Y +S + + ++ + Sbjct: 331 ----------YYRGVCYLELNN---RD-----KALEAFKEVISKYPSSSFARYSQSRMNE 372 Query: 185 GR 186 Sbjct: 373 MN 374 >gi|256082559|ref|XP_002577522.1| heat shock protein 70 [Schistosoma mansoni] gi|238662844|emb|CAZ33760.1| heat shock protein 70 (hsp70)-interacting protein, putative [Schistosoma mansoni] Length = 271 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 46/137 (33%), Gaps = 25/137 (18%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +A+ + + + + A + F + + P + AR++ K A + ++ Sbjct: 22 EAMAKMSDGDLTGAVDLFTEAIKLNPQSSLFHARRAS-----CFVRMKKPSHAIADCDKA 76 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I+ P+S Y + G + +MI + Q + ++ Y A Sbjct: 77 ISLNPDSAQ-PYKW--RGFAN-KMI-------GNWEAAYQDLQTSLKL----DYTDDANE 121 Query: 181 YVTVG---RNQLAAKEV 194 + ++ + Sbjct: 122 AIKEIEPKHKRIFEHNM 138 >gi|45656305|ref|YP_000391.1| hypothetical protein LIC10405 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45599539|gb|AAS69028.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 688 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 31/84 (36%), Gaps = 3/84 (3%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +++ A + + + A E + + P +L+ V +Y +A + Sbjct: 379 DSLFQLAEAYYNKGDLLSAEETYRRIVSSTPGDSFTETALINLGVVLDQMERYGEAVTTL 438 Query: 118 EEYITQYPESKNVDYVYYLVGMSY 141 I P++ Y+ +G+ Y Sbjct: 439 NRVIELNPKNAK---AYHTLGIVY 459 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 69/212 (32%), Gaps = 18/212 (8%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y V + K+ +A E F + P +A S + Y+ Y+ A + Sbjct: 243 YNLGVSYFKKGEIPQAEEEFKKVVIKTPSGRLAALSHSYLGNIAYNKQDYKNAEYHFRQA 302 Query: 121 ITQYPESKNVDYVYYLV-----------GMSYAQMIRDVP-YDQRATKLMLQYMSRIVER 168 P Y+Y L + Y ++ RD D +L+ + S + + Sbjct: 303 SNLSPN--EAKYLYNLAIVLQKNGNKEEALKYLELARDAGANDPEIYRLIAEGFSNLNQ- 359 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 A ++ Y +G+ ++A ++ ++++ E Sbjct: 360 ---GEMSISALQKSLKYNPTDVDSLFQLAEAYYNKGDLLSAEETYRRIVSSTPGDSFTET 416 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 A+ L + EA ++ + E P+ Sbjct: 417 ALINLGVVLDQMERYGEAVTTLNRVIELNPKN 448 >gi|24213165|ref|NP_710646.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai str. 56601] gi|24193878|gb|AAN47664.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai str. 56601] Length = 688 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 31/84 (36%), Gaps = 3/84 (3%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +++ A + + + A E + + P +L+ V +Y +A + Sbjct: 379 DSLFQLAEAYYNKGDLLSAEETYRRIVSSTPGDSFTETALINLGVVLDQMERYGEAVTTL 438 Query: 118 EEYITQYPESKNVDYVYYLVGMSY 141 I P++ Y+ +G+ Y Sbjct: 439 NRVIELNPKNAK---AYHTLGIVY 459 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 69/212 (32%), Gaps = 18/212 (8%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y V + K+ +A E F + P +A S + Y+ Y+ A + Sbjct: 243 YNLGVSYFKKGEIPQAEEEFKKVVIKTPSGRLAALSHSYLGNIAYNKQDYKNAEYHFRQA 302 Query: 121 ITQYPESKNVDYVYYLV-----------GMSYAQMIRDVP-YDQRATKLMLQYMSRIVER 168 P Y+Y L + Y ++ RD D +L+ + S + + Sbjct: 303 SNLSPN--EAKYLYNLAIVLQKNGNKEEALKYLELARDAGANDPEIYRLIAEGFSNLNQ- 359 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 A ++ Y +G+ ++A ++ ++++ E Sbjct: 360 ---GEMSISALQKSLKYNPTDVDSLFQLAEAYYNKGDLLSAEETYRRIVSSTPGDSFTET 416 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 A+ L + EA ++ + E P+ Sbjct: 417 ALINLGVVLDQMERYGEAVTTLNRVIELNPKN 448 >gi|327404478|ref|YP_004345316.1| hypothetical protein Fluta_2493 [Fluviicola taffensis DSM 16823] gi|327319986|gb|AEA44478.1| hypothetical protein Fluta_2493 [Fluviicola taffensis DSM 16823] Length = 348 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 51/145 (35%), Gaps = 31/145 (21%) Query: 129 NVDYVYYL-VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 N+ Y+ YL ++Y K L + I++ Y + Sbjct: 230 NIPYMDYLDKSLNYTNR--------GKWKQALSRFNEIIKTYPD-----DVNAR------ 270 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-NYSDAEHAEEAMARLVEAYVALALMDEA 246 Y G+Y A F L + + +EA L E+ +A A Sbjct: 271 ------FYAAWCYYNLGQYNDACVNFSACLQLEF--SNFNDEAEWYLAESRLANGDKHSA 322 Query: 247 REVVSLIQERYPQGYWARYVETLVK 271 RE+ S I+ + +GY+++ E +K Sbjct: 323 RELFSKIKNQ--KGYYSKQAEKRLK 345 >gi|262393796|ref|YP_003285650.1| putative heat shock protein [Vibrio sp. Ex25] gi|262337390|gb|ACY51185.1| putative heat shock protein [Vibrio sp. Ex25] Length = 373 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 24/184 (13%), Positives = 56/184 (30%), Gaps = 30/184 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A ++ +A + F Q + + A + L++ + ++++A + Sbjct: 96 AKDYMVSGFLDRAEKIFEQLVEEPDYKEAALQ-QLVTIY--QQTREWEKAIYYANQLAKL 152 Query: 124 YPESKNVDYVYYLVG-MSYA-QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 +K + +++ I + T +Q+ + + A Sbjct: 153 --GNKRSR----MRANIAHFWCEIAMLDQADGNTNKAIQHFKKALAEDPKCVRASIALGR 206 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 + YL+ +Y I VL D + + + + E Y L Sbjct: 207 I-----------------YLESEDYKHTIKYLTGVLE--QDKDFISDVLPTIAECYHHLG 247 Query: 242 LMDE 245 DE Sbjct: 248 QEDE 251 >gi|255629414|gb|ACU15053.1| unknown [Glycine max] Length = 231 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 6/82 (7%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKS 96 + R+ V E+ EK + +FS A +YF++ + F+ AR Sbjct: 82 SAAEREASALVSERVSQAVELLEKGRELQTQGDFSGALDYFSKVIESYKDLAFSEYAR-- 139 Query: 97 LLMSAFVQYSAGKYQQAASLGE 118 + A Y G ++A + E Sbjct: 140 -VGRALALYEVGDREEAIAEME 160 >gi|213580480|ref|ZP_03362306.1| outer membrane protein assembly complex subunit YfiO [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 40 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 16/40 (40%) Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 D + +A+ + AY + L +A +V +I Sbjct: 1 PDTQATRDALPLMENAYRQMQLNAQADKVAKIIAANSKNT 40 >gi|158521641|ref|YP_001529511.1| peptidase M48 Ste24p [Desulfococcus oleovorans Hxd3] gi|158510467|gb|ABW67434.1| peptidase M48 Ste24p [Desulfococcus oleovorans Hxd3] Length = 474 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 3/59 (5%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y + L+ + A + + + PF +L Y G Y++A S+ E Sbjct: 301 YGLGLALLQNNRPADAIAHLEKVAEKSPFHPH---ALTDLGKAHYFTGAYEKALSILER 356 >gi|95929453|ref|ZP_01312196.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684] gi|95134569|gb|EAT16225.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684] Length = 251 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 38/239 (15%), Positives = 73/239 (30%), Gaps = 54/239 (22%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + +A+ +D +VR ++ +L + +SKA Sbjct: 1 MMRLIVWSVLMVALVVGGCGPTTKPKD-------EVRAHHKM---GQSYLARKEYSKALN 50 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD---YVYY 135 + P A ++ A Y Y+ + +E + P++ NV+ Y Sbjct: 51 ELLTAEKLAP-DDAAIQA--NLAEAYYGKRAYELSEQHFKESLLLDPDNPNVENNLAALY 107 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER--YTNSPYVKGARFYVTVGRNQ-LAAK 192 L D + ++ + + F V LA Sbjct: 108 L--------------DMQRWDDAAHLFRKVSDNLLFP---------FRVRSLTGLGLA-- 142 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 Y + G Y+ AI F L + + MA + Y+ +A D AR + Sbjct: 143 -------YQRGGNYIKAILAFNEALESAPGSTGI---MALQAQTYMRMAKYDLARTQLK 191 >gi|195391804|ref|XP_002054550.1| GJ22746 [Drosophila virilis] gi|194152636|gb|EDW68070.1| GJ22746 [Drosophila virilis] Length = 515 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 41/137 (29%), Gaps = 25/137 (18%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110 D + K LK + FSKA + +++ +P + A ++L + Sbjct: 40 DFAAAEQYKNKGNDLLKTKEFSKAIDMYSKAIELYPNSAIYYANRAL-----AHLRQESF 94 Query: 111 QQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 A G + P Y+ YY ++ + K L + + Sbjct: 95 GLALQDGVSAVKTDPS-----YLKGYYRRAAAHMSL--------GKFKQALSDFEYVAKC 141 Query: 169 YTNSPYVKGARFYVTVG 185 N A+ T Sbjct: 142 RPNDK---DAKLKFTEC 155 >gi|119593818|gb|EAW73412.1| hypothetical protein FLJ20699, isoform CRA_a [Homo sapiens] gi|119593821|gb|EAW73415.1| hypothetical protein FLJ20699, isoform CRA_a [Homo sapiens] Length = 453 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 45/150 (30%), Gaps = 29/150 (19%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYE 78 L+G D LD + +++ AV NF KA E Sbjct: 70 MATGLVLIGTGSSVKLDKELDLAVKTMVEISRTQPLTRREQLHVSAVETFANGNFPKACE 129 Query: 79 YFNQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDY 132 + Q +D P M A + G +Q YP + ++ Sbjct: 130 LWEQILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPL 178 Query: 133 VYYLVGMSYAQMIRDVPYDQ--RATKLMLQ 160 Y+ G+ ++ YDQ + K L Sbjct: 179 SSYVKGIYSFGLMETNFYDQAEKLAKEALS 208 >gi|91203185|emb|CAJ72824.1| hypothetical protein kustd2079 [Candidatus Kuenenia stuttgartiensis] Length = 319 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 76/227 (33%), Gaps = 62/227 (27%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY- 132 S+A E F + + P ++ V + +Y+ A ++ I P DY Sbjct: 96 SEAIELFQKVLKINPNQP---QAYFKIGTVYFDMEEYEPAIEYLKKTIEMNP-----DYK 147 Query: 133 -VYYLVGMSYAQ----------MIRDVPYDQRAT----------------KLMLQYMSRI 165 Y L+G+SYA+ + + + D K L ++ Sbjct: 148 VAYSLLGISYAKSGKYDEAVKVLKKRIELDPNLAITYSNLGLVYTMKGSNKEALVEYNKA 207 Query: 166 VERYTNSPYVKGARFYVTVGRNQL--------------------AAKEVEIGRYYLKRGE 205 + +PY + F + + A + +G YLK+ + Sbjct: 208 LGI---NPYHEETLFNIAFLYENMGQIDEALAYYNKTVECNSGNAKAQYNLGLNYLKKKQ 264 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 Y AI F++ L D EA L Y A + ++A+ SL Sbjct: 265 YDEAINAFEISLMANPD---NIEAYNNLGNVYAAKGMEEKAKNYFSL 308 >gi|53728749|ref|ZP_00135485.2| COG2956: Predicted N-acetylglucosaminyl transferase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208217|ref|YP_001053442.1| tetratricopeptide repeat protein [Actinobacillus pleuropneumoniae L20] gi|126097009|gb|ABN73837.1| hypothetical protein APL_0737 [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 398 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LD+ D ++++ K A F+ + +A Y+ + A SL V Sbjct: 103 LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 159 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++++A ++ E+ I P++ + +Y YAQ I++ D L +S+ Sbjct: 160 QKTKEWKKAINVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 212 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +E A + +G YYL + ++ +A+ ++ +L D Sbjct: 213 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYERILQQDPD-- 253 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256 E + ++ Y +A D A + LI+ Sbjct: 254 FISEVIEKIKACY--MAENDLANYELFLIRAN 283 >gi|31242247|ref|XP_321554.1| AGAP001559-PA [Anopheles gambiae str. PEST] gi|19572379|emb|CAD27925.1| putative TPR-containing phosphoprotein [Anopheles gambiae] gi|21288614|gb|EAA00907.1| AGAP001559-PA [Anopheles gambiae str. PEST] Length = 1200 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 49/141 (34%), Gaps = 24/141 (17%) Query: 133 VYYLVGMSYA--QMIRDVPYDQRATKL----MLQYMSRIVERYTNSPYVKGA-------R 179 Y L+ + Q + D+ K L +++ + + + Sbjct: 600 AYSLIALGNFWLQSLHQPNRDKEKEKKHQEKALAIYKQVLRNDPKNIWAANGIGAVLAHK 659 Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 + R+ A +E + I Y+++ +Y++AI ++ L + + E Sbjct: 660 GCIIEARDIFAQVREATADFCDVWINIAHIYVEQKQYISAIQMYENCLKKFYRHNNV-EV 718 Query: 230 MARLVEAYVALALMDEAREVV 250 M L AY + EA+ + Sbjct: 719 MQYLARAYFRAGKLKEAKMTL 739 >gi|302343834|ref|YP_003808363.1| peptidase M48 Ste24p [Desulfarculus baarsii DSM 2075] gi|301640447|gb|ADK85769.1| peptidase M48 Ste24p [Desulfarculus baarsii DSM 2075] Length = 503 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 50/121 (41%), Gaps = 14/121 (11%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 +Y +A+L ++++++ +A ++ R +P + +L G+ +A S Sbjct: 292 SPLPLYGQALLSMRKRDYDQALRILDEMERKWPGD---QDALKERGLCLVRVGRLDEAKS 348 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + +T+ P + + + +G +YA +D + R+V+ + Sbjct: 349 VLDAALTKDPGNPQI---LFAIGEAYAHSGQD--------DVAASAFRRVVQAQPENLEA 397 Query: 176 K 176 + Sbjct: 398 R 398 >gi|225619509|ref|YP_002720766.1| lytic transglycosylase [Brachyspira hyodysenteriae WA1] gi|225214328|gb|ACN83062.1| Lytic transglycosylase catalytic [Brachyspira hyodysenteriae WA1] Length = 723 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 42/120 (35%), Gaps = 8/120 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A + K + A F++ + R L SA Y+++ L + Sbjct: 210 YYMARIKQKSGDRRDAAALFDEYLSNLNNKSHRRLGLYYSADNYNRLKNYEKSIELYNTF 269 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +YP V +Y + ++ Y++ +++R+ S Y + A Sbjct: 270 LKEYPRDDYVPRIY--------NSFVTLSLNRNNLVQAKTYLTNVMKRFPKSRYTELALK 321 >gi|193084332|gb|ACF09989.1| TPR-repeat protein/GTP cyclohydrolase III [uncultured marine crenarchaeote SAT1000-49-D2] Length = 272 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 54/146 (36%), Gaps = 18/146 (12%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + + + +Y +A+ F++++ A F + + P +L KY Sbjct: 5 ASKEKTEDLLY-QAMSFMEKRQPKSAIPLFKKIVKQDP---KNTDALYNQGLALNQLRKY 60 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 Q A + ++ + P K + G++ A+ Q T L+Y ++ +E Sbjct: 61 QDAITCFDKVLEINP--KYIA-AINNRGIALAE--------QGNTSDALEYYNKAIEIDP 109 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEI 196 Y A + V ++L E I Sbjct: 110 --KYAA-AHYNKGVLYDKLLQHEEAI 132 >gi|220922402|ref|YP_002497704.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium nodulans ORS 2060] gi|219947009|gb|ACL57401.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium nodulans ORS 2060] Length = 818 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 48/164 (29%), Gaps = 35/164 (21%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAA 114 + Y + F + + +A ++Q R P + + L Y G+Y +A Sbjct: 26 ATDYYNRGDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGL-----AFYRKGEYDRAI 80 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + ++ + Y G+++ + + + + Y Sbjct: 81 ADYDQALRL---DPKSAVAYTHRGLAFYRK--------GEYDRAIADYDQALRLDP--KY 127 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 LA + ++GEY AI + L Sbjct: 128 AN------IYINRGLA---------FYRKGEYDRAIADYDQALR 156 >gi|307245597|ref|ZP_07527683.1| hypothetical protein appser1_8000 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307259007|ref|ZP_07540738.1| hypothetical protein appser11_8060 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853299|gb|EFM85518.1| hypothetical protein appser1_8000 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306867031|gb|EFM98888.1| hypothetical protein appser11_8060 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 391 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LD+ D ++++ K A F+ + +A Y+ + A SL V Sbjct: 96 LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 152 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++++A ++ E+ I P++ + +Y YAQ I++ D L +S+ Sbjct: 153 QKTKEWKKAINVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 205 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +E A + +G YYL + ++ +A+ ++ +L D Sbjct: 206 TLEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYEHILQQDPD-- 246 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256 E + ++ Y +A D A + LI+ Sbjct: 247 FISEVIEKIKACY--MAENDLANYELFLIRAN 276 >gi|295091438|emb|CBK77545.1| hypothetical protein [Clostridium cf. saccharolyticum K10] Length = 465 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 11/91 (12%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 ++L A+ +SAG+ A + +T P++ N V + +GM Y ++ Sbjct: 356 QTLEDLAYTMWSAGRMDDALNYYNTCLTIRPDNPN---VLFNMGMIY--------RSKQD 404 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 ++ +++ +Y +S Y + AR +T Sbjct: 405 FAKAVELFTQVSTQYGDSEYAEKARNQLTEL 435 >gi|282900431|ref|ZP_06308381.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] gi|281194744|gb|EFA69691.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] Length = 207 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 8/90 (8%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGK 109 D R RE+ E+ + ++S A + ++ P + + + ++ G Sbjct: 15 ADNRKLRELLEQGRKLVDSGDYSGAIAVYQDAAKLAP-----KNAKIYSGIGYLYAQQGN 69 Query: 110 YQQAASLGEEYITQYPESKNVDYVY-YLVG 138 + Q+ S + I+ P + + Y Y+ G Sbjct: 70 FSQSLSAYRQAISINPNNSDFYYAVGYIKG 99 >gi|254414647|ref|ZP_05028412.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196178495|gb|EDX73494.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 234 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 52/157 (33%), Gaps = 51/157 (32%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 G+Y A +L + I +P +DY G+ Y QM + + L +R Sbjct: 54 KQGEYSSAIALLSQAIKHHPTH-AIDY--NNRGLIYFQMGQR--------QKALDDYNRA 102 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 ++ E++ Y RG Y AA+ + LA+Y Sbjct: 103 LQLNP----------------------ELDSA--YNNRGNYYAAMGQLAKALADY----- 133 Query: 226 AEEAMAR----------LVEAYVALALMDEAREVVSL 252 E+A+ + L L D A E + L Sbjct: 134 -EKALDLNPRNVRTWINQAITFRELGLYDLAIENLDL 169 Score = 35.5 bits (81), Expect = 8.8, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 58/192 (30%), Gaps = 29/192 (15%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFV 103 D + + A K+ +S A +Q + P + L+ Sbjct: 31 TLTPRTPDHLSIKNLRTSAQRQAKQGEYSSAIALLSQAIKHHPTHAIDYNNRGLI----- 85 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG------------MSYAQMIRDV-PY 150 + G+ Q+A + P +D Y G ++ + D+ P Sbjct: 86 YFQMGQRQKALDDYNRALQLNP---ELDSAYNNRGNYYAAMGQLAKALADYEKALDLNPR 142 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL-AAKEVEIGRYYLKRGEYVAA 209 + R + Y + + +N + A + GR Y RG++ A Sbjct: 143 NVRTWINQAITFREL-GLYDLAIENLDLALILGCLQNHIYAER----GRTYHLRGDWNCA 197 Query: 210 IPRFQLVLANYS 221 I +Q L+ Sbjct: 198 IADYQRALSQLP 209 >gi|197285948|ref|YP_002151820.1| cellulose synthase protein [Proteus mirabilis HI4320] gi|194683435|emb|CAR44197.1| cellulose synthase protein [Proteus mirabilis HI4320] Length = 1091 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 74/219 (33%), Gaps = 44/219 (20%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + KA L Q +S A YF Q + P+ KS G + A E+ Sbjct: 280 LLAKADEALLNQEYSTAKRYFTQVRQLSPY-----KSE-----AYIGLGDIELALHQLEQ 329 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYD------QRATKLMLQYMSRIVERYTNSP 173 YY + Y + Q++ + Q+M+ + + Sbjct: 330 AER-----------YYQQALQYQPNDAATLHSLTKLYRQQSHQKAAQFMANLTSQ----Q 374 Query: 174 YVKGARFY---VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 Y A+ Y ++ + LAA + ++ Y++AI + + + Y D + Sbjct: 375 YKNLAQDYGYIISGIQQDLAADD-------EQQQHYLSAIEKRKAIAKAYPDEVWN---I 424 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 RL + + A + + + +R P RY L Sbjct: 425 YRLADDLLITQQPQLAEDYFNQLNQRRPNDPSRRYAYAL 463 >gi|196012190|ref|XP_002115958.1| hypothetical protein TRIADDRAFT_59913 [Trichoplax adhaerens] gi|190581734|gb|EDV21810.1| hypothetical protein TRIADDRAFT_59913 [Trichoplax adhaerens] Length = 1265 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 40/121 (33%), Gaps = 25/121 (20%) Query: 61 YEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 Y + ++ + N +A + + + P +AR + GK++ Sbjct: 897 YSRIGTAYMNQGNCEQAISMYKKSLEVKLSVLDDNHP--DMARSYK-DLGNAYFKQGKHE 953 Query: 112 QAASLGEEYITQYP-----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 +A S+ E+ + + +V Y +G Y QR + + + Sbjct: 954 KAISMYEKSLKIHKSTLGDNHTDVAQSYSEIGNIYYA--------QRKYEEAFSNYEKSL 1005 Query: 167 E 167 + Sbjct: 1006 K 1006 >gi|167749084|ref|ZP_02421211.1| hypothetical protein EUBSIR_00028 [Eubacterium siraeum DSM 15702] gi|167749749|ref|ZP_02421876.1| hypothetical protein EUBSIR_00716 [Eubacterium siraeum DSM 15702] gi|167657232|gb|EDS01362.1| hypothetical protein EUBSIR_00716 [Eubacterium siraeum DSM 15702] gi|167657942|gb|EDS02072.1| hypothetical protein EUBSIR_00028 [Eubacterium siraeum DSM 15702] Length = 1144 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 17/133 (12%), Positives = 38/133 (28%), Gaps = 34/133 (25%) Query: 61 YEKAVLFLKEQ--NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAASL 116 YE ++ ++ + + A K+ + + QY +G KY + Sbjct: 476 YEDGKKQYEDGYSQYTSGLAQYESAKAQY----DAGKAQYDAGYAQYVSGKAKYDSGKAE 531 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 ++ +Y Y G+ + + A + Sbjct: 532 YDK-----------NYADYEKGLKEYNEGKKAL--ETAKTDADKQF-------------A 565 Query: 177 GARFYVTVGRNQL 189 A+ + GR +L Sbjct: 566 DAQKKIDDGREKL 578 >gi|300312980|ref|YP_003777072.1| N-acetylglucosaminyl transferase [Herbaspirillum seropedicae SmR1] gi|300075765|gb|ADJ65164.1| N-acetylglucosaminyl transferase protein [Herbaspirillum seropedicae SmR1] Length = 391 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 4/70 (5%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + + +YE +LK +A E FN+ ++ A ++LL Sbjct: 100 PDLPAEHHGHALYELGQDYLKAGLLDRAEESFNRLIDTQ-YSAQAGRALLEI---YQREK 155 Query: 109 KYQQAASLGE 118 ++++A S E Sbjct: 156 EWERAISAAE 165 >gi|262404180|ref|ZP_06080735.1| TPR repeat-containing protein [Vibrio sp. RC586] gi|262349212|gb|EEY98350.1| TPR repeat-containing protein [Vibrio sp. RC586] Length = 257 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 55/146 (37%), Gaps = 16/146 (10%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 S+ D + + ++ Y+ AV LK+++++ A F + D+P + S Sbjct: 121 PSSSNDDAAQGTFSSDANEQAAYQNAVDLILKKRDYAGAIAAFKKFQADYPNSTFTANSH 180 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPE---SKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 + ++ + + A + +I + +K D + + D+ Sbjct: 181 YWLGQLYFAKKEDKDA---AKSFIAVVSQQDSNKRAD------ALV---KLGDIAKRNNN 228 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARF 180 + ++ + ++ Y +S K A+ Sbjct: 229 AEQARKFYQQAIDEYPDSASAKIAKE 254 Score = 35.9 bits (82), Expect = 6.0, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + Y NS + A +G+ Y Sbjct: 143 YQNAVDLILKKRDYAGAIAAFKKFQADYPNSTFT--------------ANSHYWLGQLYF 188 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + E A F V++ D+ +A+ +L + ++AR+ + YP Sbjct: 189 AKKEDKDAAKSFIAVVSQ-QDSNKRADALVKLGDIAKRNNNAEQARKFYQQAIDEYPDSA 247 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 248 SAKIAKESLK 257 >gi|225871860|ref|YP_002753314.1| hypothetical protein ACP_0168 [Acidobacterium capsulatum ATCC 51196] gi|225793685|gb|ACO33775.1| hypothetical protein ACP_0168 [Acidobacterium capsulatum ATCC 51196] Length = 250 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LAAK+ ++G +YL G+YV A RF+ EA+ L EA L EA + Sbjct: 165 LAAKDNKVGSFYLASGDYVGAYSRFKEAT---QVDPKNAEAVFGLAEAADRLGKRTEAIQ 221 Query: 249 VVSL 252 + Sbjct: 222 NFEI 225 >gi|183238963|gb|ACC61051.1| tetratricopeptide repeat domain protein [uncultured bacterium] Length = 968 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 4/62 (6%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A + + + A + + + P +A A+ Y +A + GE+ + Sbjct: 828 AESSMAGKQYKNAIKQYEAILKIDPANTIALN---NLAWAYYQEKD-ARALATGEQALRL 883 Query: 124 YP 125 P Sbjct: 884 NP 885 >gi|114591084|ref|XP_001160759.1| PREDICTED: leprecan-like 1 isoform 4 [Pan troglodytes] Length = 481 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P+ ++V L + Y + + D D A+ + Sbjct: 87 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSTDP-ASIEARED 140 Query: 162 MSRIVERY 169 ++ V+R+ Sbjct: 141 LTMFVKRH 148 >gi|150395286|ref|YP_001325753.1| TonB-dependent receptor [Sinorhizobium medicae WSM419] gi|150026801|gb|ABR58918.1| TonB-dependent receptor [Sinorhizobium medicae WSM419] Length = 1198 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 29/93 (31%), Gaps = 3/93 (3%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 ++ R++ D + + + ++ + +A E S P + + L Sbjct: 492 MAEAKREIDTALSVDPSFDVALVARGRYQMQNGDVDRAVEDLLAGSTANP--AYS-NAQL 548 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 + A Y G AA + P V Sbjct: 549 LLAAAHYEKGDRIPAAQALDNADRLDPNDPVVA 581 >gi|17232151|ref|NP_488699.1| hypothetical protein all4659 [Nostoc sp. PCC 7120] gi|17133796|dbj|BAB76358.1| all4659 [Nostoc sp. PCC 7120] Length = 236 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 31/95 (32%), Gaps = 31/95 (32%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFP--------------FAGVARKSL------------ 97 A+ ++ N+S+A NQ P +G +K+L Sbjct: 48 ALRSAQQGNYSEAIALLNQLINRHPDNAVDYNNRGLIYFQSGRTQKALQDYNTALQLNPD 107 Query: 98 LMSAF---VQYSA--GKYQQAASLGEEYITQYPES 127 L SA+ Y A G+ A + + I P Sbjct: 108 LASAYNNRANYYAACGQLASALADYDRAIDLNPRH 142 >gi|330504464|ref|YP_004381333.1| hypothetical protein MDS_3550 [Pseudomonas mendocina NK-01] gi|328918750|gb|AEB59581.1| hypothetical protein MDS_3550 [Pseudomonas mendocina NK-01] Length = 268 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 4/54 (7%) Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 Y +G+ Y + QR L Y +++ + S A + R Sbjct: 93 ALYQIGLIYMNRFNE----QRDDAKALNYFYKVLNEFPASQAASRAEERIATIR 142 >gi|300866713|ref|ZP_07111397.1| TPR repeat-containing protein [Oscillatoria sp. PCC 6506] gi|300335313|emb|CBN56557.1| TPR repeat-containing protein [Oscillatoria sp. PCC 6506] Length = 398 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 43/150 (28%), Gaps = 38/150 (25%) Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-NSP--------YVK 176 + YYL G+S+ DQ K + +R +E NS Y Sbjct: 265 GNPQNAEGYYLRGLSH--------LDQGKLKDAIADFNRSLELNPKNSEAYFNRGVAYAY 316 Query: 177 GARFY-----VTVGRNQLAAKEVEI------GRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 + + + I Y RG A +A++ A Sbjct: 317 QEPTRSGSNVFDPLKQAIEDYTLAIKANPGYADAYYNRGVAHLANNDKPGAIADFQKA-- 374 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQE 255 E Y L D+ ++ + I+E Sbjct: 375 --------AELYQKLGRKDDYQQALKKIKE 396 >gi|291400403|ref|XP_002716556.1| PREDICTED: leprecan-like 1 [Oryctolagus cuniculus] Length = 709 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P+ ++V L + Y + + D D + + Sbjct: 315 FAYYRVGEYVKALECAKAYLLFHPDDEDV-----LDNVDYYESLLDDDLDPESI-EARED 368 Query: 162 MSRIVERY 169 + V+R+ Sbjct: 369 SAMFVKRH 376 >gi|194373325|emb|CAM32586.2| N-acetylglucosaminyl transferase protein [Herbaspirillum seropedicae] Length = 391 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 4/70 (5%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + + +YE +LK +A E FN+ ++ A ++LL Sbjct: 100 PDLPAEHHGHALYELGQDYLKAGLLDRAEESFNRLIDTQ-YSAQAGRALLEI---YQREK 155 Query: 109 KYQQAASLGE 118 ++++A S E Sbjct: 156 EWERAISAAE 165 >gi|159027487|emb|CAO89452.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 266 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 30/232 (12%), Positives = 68/232 (29%), Gaps = 59/232 (25%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 +++ + D S +R + EKA+ ++ ++++A Y+ Q FP Sbjct: 9 LSLLLFFALPIAAYADSPTISEEQIREGEVIAEKALEATEKGDYAQAESYWTQLVAKFPT 68 Query: 90 AG--VARKS-------LLMSAFVQYSA----------------------GKYQQAASLGE 118 + + L A ++ GKYQ+A + Sbjct: 69 NPAVWSNRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEGEGKYQEAIADYN 128 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + P + Y G + + + ++ + + N + + Sbjct: 129 KVLELAPND---AFAYNNRGNAEGGL--------GDWEAAVKDYRQATQLAPNFAWAQ-- 175 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 LA E+ G Y A+ + + + Y A+ Sbjct: 176 ------ANLALALYEL---------GRYPEAVQKMRNIARKYPMFPDVRAAL 212 >gi|218131122|ref|ZP_03459926.1| hypothetical protein BACEGG_02727 [Bacteroides eggerthii DSM 20697] gi|317477000|ref|ZP_07936242.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA] gi|217986642|gb|EEC52976.1| hypothetical protein BACEGG_02727 [Bacteroides eggerthii DSM 20697] gi|316906793|gb|EFV28505.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA] Length = 281 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 7/69 (10%), Positives = 19/69 (27%), Gaps = 4/69 (5%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + +++ A + + + A Y A +A E + Sbjct: 57 AEGDSAYMRNDYASAIQIYESLLKK---GEAAE-IYYNLGNSYYKADDIAKAILNYERAL 112 Query: 122 TQYPESKNV 130 P + ++ Sbjct: 113 LLQPGNADI 121 >gi|190150049|ref|YP_001968574.1| hypothetical protein APP7_0780 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|189915180|gb|ACE61432.1| hypothetical protein APP7_0780 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 398 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LD+ D ++++ K A F+ + +A Y+ + A SL V Sbjct: 103 LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 159 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++++A ++ E+ I P++ + +Y YAQ I++ D L +S+ Sbjct: 160 QKTKEWKKAINVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 212 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +E A + +G YYL + ++ +A+ ++ +L D Sbjct: 213 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYEHILQQDPD-- 253 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256 E + ++ Y +A D A + LI+ Sbjct: 254 FISEVIEKIKACY--MAENDLANYELFLIRAN 283 >gi|124024556|ref|YP_001018863.1| hypothetical protein P9303_28681 [Prochlorococcus marinus str. MIT 9303] gi|123964842|gb|ABM79598.1| Hypothetical protein P9303_28681 [Prochlorococcus marinus str. MIT 9303] Length = 539 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 18/143 (12%), Positives = 40/143 (27%), Gaps = 27/143 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASL 116 + ++ A +N+ P +A+ + +Q A S Sbjct: 365 NRGSAKDDLGDYQGAIADYNKAIAINP--------QDDAAYNNRGNAKQKLKDHQGAISD 416 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + I P++ +SY D + + ++ +E +S Sbjct: 417 YSKAIAINPQN----------AISYTNRGNTKD-DLGDYQGAIADFNKAIEIKPDS---A 462 Query: 177 GARFYVTVGRNQLAAKEVEIGRY 199 A ++ L + I Y Sbjct: 463 NAYNNRGNAKDDLGDHQGAIADY 485 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 11/99 (11%), Positives = 30/99 (30%), Gaps = 14/99 (14%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A+ +Y YQ+A + + I +P++ + + + + Sbjct: 299 AYAKYDLRDYQEAIADYTKTIEIHPQNT-----------VSYNNRGNAKQKLKDHQGAIA 347 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 ++ + + A ++ L + I Y Sbjct: 348 DFNKAIAIDPQN---HTAYTNRGSAKDDLGDYQGAIADY 383 >gi|118359319|ref|XP_001012899.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89294666|gb|EAR92654.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 1122 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 28/191 (14%), Positives = 63/191 (32%), Gaps = 38/191 (19%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ ++A F ++ S+A E F + P + + + Y G + Sbjct: 326 EDLLDEAYSFFDQKKESEAIEKFKKVIEINPNSYETYS-----SIGYCYYIIGDTINSEE 380 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 ++ I +KN YY +G Y + + + + + ++ + Y Sbjct: 381 SFKKSIEL---NKNYSRAYYYLGCEYFMQGKQ--------EQAILNLKQSIKL---NKYD 426 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + F + Y ++GE AI F+ + + E+A + Sbjct: 427 ADSHFKIGYI--------------YYEKGEDDIAINYFKQAIKINP---YYEQAYNMIGN 469 Query: 236 AYVALALMDEA 246 Y ++A Sbjct: 470 IYNYQQKQEDA 480 Score = 36.6 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 59/216 (27%), Gaps = 30/216 (13%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 YEK + F +A + ++ M + K + A ++ Sbjct: 437 YYEKGEDDIAINYFKQAIKI----------NPYYEQAYNMIGNIYNYQQKQEDAIIWYDK 486 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-------- 171 I P + Y +G+ Y + + + +V Y N Sbjct: 487 AIQLNPNFGDN---YNNLGLQYYNQ-KQFDQALWYFQKSAEKSKNLVNAYVNQGLCYQNL 542 Query: 172 --SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 + + Y + +I ++Q+ + + +A Sbjct: 543 NQQDEAIQQYQKAIEVDPNFSDAHYNLALIYYDKKLMKESIEQYQIAIDVKPSS---YDA 599 Query: 230 MARLVEAYVALALMDEAREVVS---LIQERYPQGYW 262 + AY +L DEA + I+ Y + Sbjct: 600 YYNMGIAYHSLQQYDEAIQSYKNAIKIKANYNNAIY 635 >gi|75911170|ref|YP_325466.1| hypothetical protein Ava_4974 [Anabaena variabilis ATCC 29413] gi|75704895|gb|ABA24571.1| TPR repeat protein [Anabaena variabilis ATCC 29413] Length = 422 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 6/84 (7%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 E Y + + K+++++ A E F++ + P+ A + L Y +G A S Sbjct: 2 NNEFYNQGLEKAKQRDYAGAIEEFSRALKLTPY--FAE-AYLQRGLAYYDSGAILLAVSD 58 Query: 117 GEEYITQYPESKNVDYVYYLVGMS 140 E I PES YY ++ Sbjct: 59 YTEVIRINPESVE---AYYCRSLA 79 >gi|89898762|ref|YP_515872.1| hypothetical protein CF0955 [Chlamydophila felis Fe/C-56] gi|89332134|dbj|BAE81727.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56] Length = 335 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 38/112 (33%), Gaps = 14/112 (12%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + +Y K+V+ N A P K+ + ++ ++ + Sbjct: 141 DPWNPQSLYNKSVVLTDMGNEKDAIALLETAVSKNPL-YW--KAWIKLGYLLSRHKQWDR 197 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 A E + P ++ +Y +G+ Y + + T+L L+ Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQE 238 >gi|226229318|ref|YP_002763424.1| hypothetical protein GAU_3912 [Gemmatimonas aurantiaca T-27] gi|226092509|dbj|BAH40954.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 308 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 55/177 (31%), Gaps = 27/177 (15%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + A G + A ++ + + P S ++ Y + A+ I D D Sbjct: 33 EVSRARALIERGDGENARAVLDSLVGAAPLASLDLAEALYWRAV-LAERIGDAERD---- 87 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 R+V SP A + + L RG A P F+ Sbjct: 88 ------WKRLVIEAPLSPRTPDALLRLGEL-DML-------------RGHPADARPYFER 127 Query: 216 VLANYSDAEHAEEAMARLVEAY-VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 V+ + D+ LV +Y L + + +L P+G + L + Sbjct: 128 VVREFPDSTRIARGTIWLVRSYFDESELPRGCQTLRALPVASVPEGELRLQADELRR 184 Score = 36.6 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 41/137 (29%), Gaps = 20/137 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE-Y 120 +A ++ + A + P + L A Y + E + Sbjct: 35 SRARALIERGDGENARAVLDSLVGAAP------LASLDLAEALYWRAVLAERIGDAERDW 88 Query: 121 ITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 P S +G M+R P D R Y R+V + +S + Sbjct: 89 KRLVIEAPLSPRTPDALLRLG--ELDMLRGHPADARP------YFERVVREFPDS--TRI 138 Query: 178 ARFYVTVGRNQLAAKEV 194 AR + + R+ E+ Sbjct: 139 ARGTIWLVRSYFDESEL 155 >gi|221640122|ref|YP_002526384.1| hypothetical protein RSKD131_2023 [Rhodobacter sphaeroides KD131] gi|221160903|gb|ACM01883.1| Hypothetical Protein RSKD131_2023 [Rhodobacter sphaeroides KD131] Length = 274 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 39/126 (30%), Gaps = 10/126 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ-QAASLGEE 119 +++A L + +F A + + + + ++ + G+ A + E Sbjct: 155 FDRAQEVLGQGDFRTAADLLKTFAETYTGGQLTYEAHYLRGEALSQLGETANAARAYLES 214 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P+ +G + D R T ++ + R+ SP A Sbjct: 215 FSGD-PDGPRAPEALLKLGRALG--------DLRQTPEACVTLAEVGTRFPGSPSAAEAA 265 Query: 180 FYVTVG 185 + Sbjct: 266 TTMQGL 271 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 36/123 (29%), Gaps = 20/123 (16%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q + + E YT A + +QL Sbjct: 164 QGDFRTAADLLKTFAETYTGGQLTYEAHYLRGEALSQLGE-----------------TAN 206 Query: 212 RFQLVLANY---SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + L ++ D A EA+ +L A L EA ++ + R+P A T Sbjct: 207 AARAYLESFSGDPDGPRAPEALLKLGRALGDLRQTPEACVTLAEVGTRFPGSPSAAEAAT 266 Query: 269 LVK 271 ++ Sbjct: 267 TMQ 269 >gi|198274646|ref|ZP_03207178.1| hypothetical protein BACPLE_00798 [Bacteroides plebeius DSM 17135] gi|198272093|gb|EDY96362.1| hypothetical protein BACPLE_00798 [Bacteroides plebeius DSM 17135] Length = 250 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 7/69 (10%), Positives = 21/69 (30%), Gaps = 3/69 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +A +++ FS+A + + + + + +A E + Sbjct: 25 AEADEAYQKEKFSEAASLYEEILQT--QGE-SADIYYNLGNAYFKLKNTAKAVLNYERAL 81 Query: 122 TQYPESKNV 130 P ++ Sbjct: 82 LLNPGDADI 90 >gi|197337384|ref|YP_002158319.1| transporter [Vibrio fischeri MJ11] gi|197314636|gb|ACH64085.1| transporter [Vibrio fischeri MJ11] Length = 623 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 7/87 (8%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEY----FN-QCSRDFPFAGVARKSLLMSAFV 103 D +Y+++ Y+ A + + + A +Y + + +S A Sbjct: 347 DYNAHQQYEQKEYQAASEQFQSKQWKGAAQYKAGDYKGAIESLTGLSD--VQSQYNLANA 404 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNV 130 G+ + A + E + +P+ K+ Sbjct: 405 LAQNGQLEDAKAQYESLLQAHPDMKDA 431 >gi|169342370|ref|ZP_02863436.1| tetratricopeptide repeat protein [Clostridium perfringens C str. JGS1495] gi|169299490|gb|EDS81554.1| tetratricopeptide repeat protein [Clostridium perfringens C str. JGS1495] Length = 481 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 14/142 (9%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAF---- 102 +++ +++Y K KE+ + A + F + + F+ S L + Sbjct: 346 ENLMKTDGVKDLYLKGSDLFKEKKYEDALKDFEKA---YAFSS---DSYLRPHLIYFMGT 399 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + K +A +EY+ Y + + Y + + + +Y Sbjct: 400 SYENLDKNTEAIKYFQEYLKDYKAKPDAEDFMY-TPQCLYNLAILYNK-EGNSAESKKYA 457 Query: 163 SRIVERYTNSPYVKGARFYVTV 184 I Y N+ + + Sbjct: 458 QEIENDYPNTMFYNDVTKKIIY 479 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 6/73 (8%) Query: 200 YLKRGEYVAAIPRFQLVLANY---SDAE---HAEEAMARLVEAYVALALMDEAREVVSLI 253 Y + AI FQ L +Y DAE + + + L Y E+++ I Sbjct: 401 YENLDKNTEAIKYFQEYLKDYKAKPDAEDFMYTPQCLYNLAILYNKEGNSAESKKYAQEI 460 Query: 254 QERYPQGYWARYV 266 + YP + V Sbjct: 461 ENDYPNTMFYNDV 473 >gi|94967941|ref|YP_589989.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94549991|gb|ABF39915.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 748 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 18/133 (13%), Positives = 49/133 (36%), Gaps = 20/133 (15%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-- 94 G ++++ + + + + +Y+ A + +++ +A ++ + P A Sbjct: 622 GEFDDAAKEFQQELEVNPQSVQAMYQLAYIRMQQHQAPEASSLLSEVIKQQPNNSDAHYQ 681 Query: 95 --KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 K+LL + + + + +P DY Y+ +S+A D Sbjct: 682 LGKALLEQGDAGGATRELETSV-------KLHPT----DYAYFQ--LSHAYARTGREAD- 727 Query: 153 RATKLMLQYMSRI 165 +K L+ ++ Sbjct: 728 --SKQALEEFEKL 738 >gi|89075799|ref|ZP_01162187.1| hypothetical protein SKA34_03129 [Photobacterium sp. SKA34] gi|89048531|gb|EAR54106.1| hypothetical protein SKA34_03129 [Photobacterium sp. SKA34] Length = 240 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 10/131 (7%) Query: 57 QREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + YEKAV LKE+++ A + F +P + + + ++ + AA+ Sbjct: 119 ENAAYEKAVNLILKEKDYKGATKAFQSFLTAYPNSVYKPNASYWLGQLFFAQNQLADAAT 178 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + SK D +G+ I + D A K Y +++ Y NS Y Sbjct: 179 NFKVVADTKDSSKRAD-ALLKLGV-----IAERGNDIAAAK---TYYQEVIKAYPNSTYA 229 Query: 176 KGARFYVTVGR 186 A+ +T + Sbjct: 230 NQAKTALTKLK 240 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 39/130 (30%), Gaps = 23/130 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y+ A + ++T YP S Y +G + + + Sbjct: 132 KEKDYKGATKAFQSFLTAYPNSVYKPNASYWLGQLFFAQNQLAD--------AATNFKVV 183 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 + +S A + V + ++ + Y Q V+ Y ++ + Sbjct: 184 ADTK-DSSKRADALLKLGVIAER--GNDIAAAKTYY------------QEVIKAYPNSTY 228 Query: 226 AEEAMARLVE 235 A +A L + Sbjct: 229 ANQAKTALTK 238 >gi|307263382|ref|ZP_07544998.1| hypothetical protein appser13_7990 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306871260|gb|EFN02988.1| hypothetical protein appser13_7990 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 391 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LD+ D ++++ K A F+ + +A Y+ + A SL V Sbjct: 96 LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 152 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++++A ++ E+ I P++ + +Y YAQ I++ D L +S+ Sbjct: 153 QKTKEWKKAINVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 205 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +E A + +G YYL + ++ +A+ ++ +L D Sbjct: 206 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYEHILQQDPD-- 246 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256 E + ++ Y +A D A + LI+ Sbjct: 247 FISEVIEKIKACY--MAENDLANYELFLIRAN 276 >gi|307249950|ref|ZP_07531922.1| hypothetical protein appser4_7460 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858010|gb|EFM90094.1| hypothetical protein appser4_7460 [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 391 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LD+ D ++++ K A F+ + +A Y+ + A SL V Sbjct: 96 LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 152 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++++A ++ E+ I P++ + +Y YAQ I++ D L +S+ Sbjct: 153 QKTKEWKKAINVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 205 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +E A + +G YYL + ++ +A+ ++ +L D Sbjct: 206 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYEHILQQDPD-- 246 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256 E + ++ Y +A D A + LI+ Sbjct: 247 FISEVIEKIKACY--MAENDLANYELFLIRAN 276 >gi|301310435|ref|ZP_07216374.1| putative tetratricopeptide repeat protein [Bacteroides sp. 20_3] gi|300832009|gb|EFK62640.1| putative tetratricopeptide repeat protein [Bacteroides sp. 20_3] Length = 267 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 33/106 (31%), Gaps = 19/106 (17%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 +FF + +C + Q + ++A + +++++KA E + Sbjct: 22 VLFFLLTLCLIGSAYAQDTAL----------------KEAEVAYTKEDYAKAIELYEGIL 65 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + A Y AGK A E + P + Sbjct: 66 KSN--GESAA-VYYNLGNAYYKAGKIAPAILNYERCLLLDPGDSDA 108 >gi|298242090|ref|ZP_06965897.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963] gi|297555144|gb|EFH89008.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963] Length = 1001 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 58/169 (34%), Gaps = 29/169 (17%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYL------VGMSYAQMI 145 A + + +A + + G+Y A + I Y +++V+ Y+ ++ A Sbjct: 156 AGQIDVNAAIINFELGQYDAALRAFDRAIETYQMCNEDVE--LYIARARGNKALALAAQG 213 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 R K ERY S + LA +++ I Y +G Sbjct: 214 RFREA-VEMHKQARATF----ERYGQSEEIS------------LAREDLNIAEIYAAQGH 256 Query: 206 YVAAI---PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 Y A+ + + + E EA ++ + L EA E+ + Sbjct: 257 YSQALLLYNQCRETFERHQMLESRAEATHQMCVCLLRLNRSREAYELAA 305 >gi|168217474|ref|ZP_02643099.1| tetratricopeptide repeat protein [Clostridium perfringens NCTC 8239] gi|182380480|gb|EDT77959.1| tetratricopeptide repeat protein [Clostridium perfringens NCTC 8239] Length = 475 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 14/142 (9%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAF---- 102 +++ +++Y K KE+ + A + F + + F+ S L + Sbjct: 340 ENLMKTDGVKDLYLKGSDLFKEKKYEDALKDFEKA---YAFSS---DSYLRPHLIYFMGT 393 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + K +A +EY+ Y + + Y + + + +Y Sbjct: 394 SYENLDKNTEAIKYFQEYLKDYKAKPDAEDFMY-TPQCLYNLAILYNK-EGNSAESKKYA 451 Query: 163 SRIVERYTNSPYVKGARFYVTV 184 I Y N+ + + Sbjct: 452 QEIENDYPNTMFYNDVTKKIIY 473 Score = 37.0 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 6/73 (8%) Query: 200 YLKRGEYVAAIPRFQLVLANY---SDAE---HAEEAMARLVEAYVALALMDEAREVVSLI 253 Y + AI FQ L +Y DAE + + + L Y E+++ I Sbjct: 395 YENLDKNTEAIKYFQEYLKDYKAKPDAEDFMYTPQCLYNLAILYNKEGNSAESKKYAQEI 454 Query: 254 QERYPQGYWARYV 266 + YP + V Sbjct: 455 ENDYPNTMFYNDV 467 >gi|165976153|ref|YP_001651746.1| tetratricopeptide repeat protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165876254|gb|ABY69302.1| predicted N-acetylglucosaminyl transferase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 398 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LD+ D ++++ K A F+ + +A Y+ + A SL V Sbjct: 103 LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 159 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++++A ++ E+ I P++ + +Y YAQ I++ D L +S+ Sbjct: 160 QKTKEWKKAINVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 212 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +E A + +G YYL + ++ +A+ ++ +L D Sbjct: 213 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYEHILQQDPD-- 253 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256 E + ++ Y +A D A + LI+ Sbjct: 254 FISEVIEKIKACY--MAENDLANYELFLIRAN 283 >gi|218779222|ref|YP_002430540.1| hypothetical protein Dalk_1372 [Desulfatibacillum alkenivorans AK-01] gi|218760606|gb|ACL03072.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum alkenivorans AK-01] Length = 668 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 54/142 (38%), Gaps = 11/142 (7%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 CF G+ + D +Y A +F E+++ A +F + + PF Sbjct: 495 CFKAGFHEEGRSIRDEIVQADPEEVIVLYNIATMFYDEKDYKNAKIWFQKNTEANPFQYE 554 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A L A + G+ A + E + +P N+ V+ L+G+ Y + P Sbjct: 555 AYTFLGSIA---LNQGETDAALANYLEALNLHP---NLPEVHNLLGLLYIKKGLAAP--- 605 Query: 153 RATKLMLQYMSRIVERYTNSPY 174 + + R+ + ++PY Sbjct: 606 --AEAHFKESMRLAPDFPDAPY 625 >gi|120599217|ref|YP_963791.1| tetratricopeptide domain-containing protein [Shewanella sp. W3-18-1] gi|146292709|ref|YP_001183133.1| tetratricopeptide domain-containing protein [Shewanella putrefaciens CN-32] gi|120559310|gb|ABM25237.1| Tetratricopeptide domain protein [Shewanella sp. W3-18-1] gi|145564399|gb|ABP75334.1| Tetratricopeptide domain protein [Shewanella putrefaciens CN-32] gi|319426013|gb|ADV54087.1| tol-pal system protein YbgF [Shewanella putrefaciens 200] Length = 249 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 22/124 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 KY A +I QYP+S Y +G Q + + Sbjct: 139 KERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFA--------EAKQAFNTV 190 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V R+++S + + + K G+ A +Q V+ +Y+++ Sbjct: 191 VVRFSDSNKRGDSLVKLGMIAE--------------KTGDKAGATQYYQQVVKDYANSAA 236 Query: 226 AEEA 229 A A Sbjct: 237 ARIA 240 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 46/131 (35%), Gaps = 17/131 (12%) Query: 61 YEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE- 118 YE AV LKE+ + A F + +P + A + + ++ ++ +A Sbjct: 130 YESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQAFNT 189 Query: 119 ---EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + + MI + D+ QY ++V+ Y NS Sbjct: 190 VVVRFSDSNKRGDS---------LVKLGMIAEKTGDKAG---ATQYYQQVVKDYANSAAA 237 Query: 176 KGARFYVTVGR 186 + A+ + + Sbjct: 238 RIAQQQLAAIK 248 >gi|67920503|ref|ZP_00514023.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] gi|67857987|gb|EAM53226.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] Length = 278 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 80/263 (30%), Gaps = 65/263 (24%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV--------------Y 61 +L K +T+ I CF G + + + + + + Y Sbjct: 1 MIKLKKIYITLL--IGGCFSFGNIALNLAESFAQDNPETPQENVLEEPEETPSLTAIDWY 58 Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 K V ++ +N+ A F++ + P + + K++++ ++ I Sbjct: 59 NKGVDEIEARNYQGAIAAFSESIKLDPTDA---DAYYNRGYSYLVLEKFEESIEDYDQAI 115 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + Y Y +Y Q+ + + + S+ +E S Y Sbjct: 116 EL---KSDFAYAYGNRCYAYYQL--------KNHEQAITDCSKAIEL--ESKY------- 155 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGE-------YVAAIPRFQLVLANYSDAEHAEEAMARLV 234 G +Y+ RG + AAI + + + + +A Sbjct: 156 ---------------GDFYIYRGNAKDDLEMHEAAILDYNQAIII---SPNNPKAYYNRA 197 Query: 235 EAYVALALMDEA-REVVSLIQER 256 AY L +A + IQ Sbjct: 198 LAYNRLGKSLQAVEDYSKAIQFN 220 >gi|298375544|ref|ZP_06985501.1| tetratricopeptide repeat containing protein [Bacteroides sp. 3_1_19] gi|298268044|gb|EFI09700.1| tetratricopeptide repeat containing protein [Bacteroides sp. 3_1_19] Length = 255 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 33/106 (31%), Gaps = 19/106 (17%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 +FF + +C + Q + ++A + +++++KA E + Sbjct: 10 VLFFLLTLCLIGSAYAQDTAL----------------KEAEVAYTKEDYAKAIELYEGIL 53 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + A Y AGK A E + P + Sbjct: 54 KSN--GESAA-VYYNLGNAYYKAGKIAPAILNYERCLLLDPGDSDA 96 >gi|291556355|emb|CBL33472.1| ABC-type transport system, involved in lipoprotein release, permease component [Eubacterium siraeum V10Sc8a] Length = 1144 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 17/133 (12%), Positives = 38/133 (28%), Gaps = 34/133 (25%) Query: 61 YEKAVLFLKEQ--NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAASL 116 YE ++ ++ + + A K+ + + QY +G KY + Sbjct: 476 YEDGKKQYEDGYSQYTSGLAQYESAKAQY----DAGKAQYDAGYAQYVSGKAKYDSGKAE 531 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 ++ +Y Y G+ + + A + Sbjct: 532 YDK-----------NYADYEKGLKEYNEGKTAL--ETAKTDADKQF-------------A 565 Query: 177 GARFYVTVGRNQL 189 A+ + GR +L Sbjct: 566 DAQKKIDDGREKL 578 >gi|262381902|ref|ZP_06075040.1| BatE protein [Bacteroides sp. 2_1_33B] gi|262297079|gb|EEY85009.1| BatE protein [Bacteroides sp. 2_1_33B] Length = 253 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 33/106 (31%), Gaps = 19/106 (17%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 +FF + +C + Q + ++A + +++++KA E + Sbjct: 8 VLFFLLTLCLIGSAYAQDTAL----------------KEAEVAYTKEDYAKAIELYEGIL 51 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + A Y AGK A E + P + Sbjct: 52 KSN--GESAA-VYYNLGNAYYKAGKIAPAILNYERCLLLDPGDSDA 94 >gi|218888081|ref|YP_002437402.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218759035|gb|ACL09934.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 789 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 46/104 (44%), Gaps = 12/104 (11%) Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 A + + V + +LAA+ ++ +++AA+ R+ V++ Y + A++ Sbjct: 282 PEGELAPNAAYGMAVAQEELAARS-------WRKDDFLAAVARYNDVVSAYPEDSLADDC 334 Query: 230 MARLVEAYVALALMDEAREVVSLIQE---RYPQGYWARYVETLV 270 M R + +D+A L++ RYP+G A L+ Sbjct: 335 MLRAAR--LRATRLDDAEGAHQLLEAQLRRYPKGDMAGEARALL 376 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 43/152 (28%), Gaps = 25/152 (16%) Query: 52 TDVRYQREVYEKAVLFLK--EQNFSKAY---------EYFNQCSRDFPFAGVARKSLLMS 100 +D ++Y +A L+ + +A + P +A + Sbjct: 235 SDPAKAAKLYAEARKELEAVRGDARRAALREPWLRVMALYEGARDAAPEGELAPNAAYGM 294 Query: 101 AFVQ-------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 A Q + + A + + ++ YPE D L +R D Sbjct: 295 AVAQEELAARSWRKDDFLAAVARYNDVVSAYPEDSLADDCM-LRA----ARLRATRLD-- 347 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + Q + + RY AR + Sbjct: 348 DAEGAHQLLEAQLRRYPKGDMAGEARALLADL 379 >gi|159027771|emb|CAO89641.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 178 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 50/140 (35%), Gaps = 18/140 (12%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR--KSLL--MSAFVQYSAGKYQ 111 +E YE L+L ++ + +A + + + ++L+ F ++ + + Sbjct: 51 TAKEYYELGSLYLDKKLYVQALSLLQKALKISEEESIEPENQALIYNAIGFSYFAQEQLE 110 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A +E I YP+ Y + ++ + + + K L+ ++ N Sbjct: 111 LAIRNYKEAIKLYPQ--------YSIALNNLGNVYEKK---QMAKKALETYEETLKFDPN 159 Query: 172 SPYVKGARFYVTVGRNQLAA 191 + A+ R + A Sbjct: 160 N---TVAKKRTESLRKRFAE 176 >gi|110802315|ref|YP_698451.1| TPR repeat-containing protein [Clostridium perfringens SM101] gi|110682816|gb|ABG86186.1| tetratricopeptide repeat protein [Clostridium perfringens SM101] Length = 473 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 14/144 (9%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAF---- 102 + + +++Y K KE+ + A + F + + F+ S L + Sbjct: 338 EKLMKTDGVKDLYLKGSDLFKEKKYEDALKDFEKA---YAFSS---DSYLRPHLIYFMGT 391 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + K +A +EY+ Y + + Y + + + +Y Sbjct: 392 SYENLDKNTEAIKYFQEYLKDYKAKPDAEDFMY-TPQCLYNLAILYNK-EGNSAESKKYA 449 Query: 163 SRIVERYTNSPYVKGARFYVTVGR 186 I Y N+ + + G+ Sbjct: 450 QEIENDYPNTMFYNDVTKKIIYGK 473 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 6/73 (8%) Query: 200 YLKRGEYVAAIPRFQLVLANY---SDAE---HAEEAMARLVEAYVALALMDEAREVVSLI 253 Y + AI FQ L +Y DAE + + + L Y E+++ I Sbjct: 393 YENLDKNTEAIKYFQEYLKDYKAKPDAEDFMYTPQCLYNLAILYNKEGNSAESKKYAQEI 452 Query: 254 QERYPQGYWARYV 266 + YP + V Sbjct: 453 ENDYPNTMFYNDV 465 >gi|57106584|ref|XP_534923.1| PREDICTED: similar to FK506-binding protein 4 (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (p59 protein) (HSP binding immunophilin) (HBI) (FKBP52 protein) (52 kDa FK506 binding protein) (FKBP59) [Canis familiaris] Length = 459 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 43/144 (29%), Gaps = 26/144 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109 E+ ++ KE + +A + + + A+K+ L A Sbjct: 275 ERGTVYFKEGKYKQALLQYKKIISWLEYESSFSNEDAQKAQALRLASHLNLAMCHLKLQA 334 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + D ++++ Y Sbjct: 335 FSAAVESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 383 Query: 170 TNSPYVKGARFYV--TVGRNQLAA 191 S A+ V R QLA Sbjct: 384 P-SNKAAKAQLAVCQQRIRKQLAR 406 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 2/78 (2%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYF 80 L ++A+C L ++ + ++ D ++ ++ + L +F A F Sbjct: 317 LRLASHLNLAMCHLKLQAFSAAVESCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADF 376 Query: 81 NQCSRDFPFAGVARKSLL 98 + + +P + A K+ L Sbjct: 377 QKVLQLYP-SNKAAKAQL 393 >gi|32491159|ref|NP_871413.1| hypothetical protein WGLp410 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166366|dbj|BAC24556.1| ybgF [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 251 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 38/118 (32%), Gaps = 8/118 (6%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 L +N KA E F + +P + + + Y GK + I ++P Sbjct: 142 LGNKNHDKAIEKFKNFIKKYPKSIYTPNAKYWLGQLYYIKGKSDDSIYYFASMIKEFPNF 201 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + L Q +D+ ++ K ++ + Y + A+ + Sbjct: 202 QKTPDAL-LKIAILMQKNKDIEKAKKIYKKIINF-------YPHDKASNEAKKRLNSL 251 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 10/74 (13%), Positives = 30/74 (40%), Gaps = 14/74 (18%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 ++ +++Y S Y A++++ G+ Y +G+ +I F + Sbjct: 149 KAIEKFKNFIKKYPKSIYTPNAKYWL--------------GQLYYIKGKSDDSIYYFASM 194 Query: 217 LANYSDAEHAEEAM 230 + + + + +A+ Sbjct: 195 IKEFPNFQKTPDAL 208 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 2/63 (3%) Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 AI +F+ + Y + + A L + Y D++ + + + +P + + + Sbjct: 150 AIEKFKNFIKKYPKSIYTPNAKYWLGQLYYIKGKSDDSIYYFASMIKEFPN--FQKTPDA 207 Query: 269 LVK 271 L+K Sbjct: 208 LLK 210 >gi|86144577|ref|ZP_01062909.1| hypothetical protein MED222_09208 [Vibrio sp. MED222] gi|85837476|gb|EAQ55588.1| hypothetical protein MED222_09208 [Vibrio sp. MED222] Length = 652 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 31/119 (26%), Gaps = 27/119 (22%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----------------KAVLFLKEQNFS 74 + Q + TD + ++Y+ K + K +F Sbjct: 325 CGLAVFVSFSQPNTAFANPWKTDDQVGYQLYQDEDFQQAAEQFEQQEWKGIAQYKAGDFE 384 Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A + S + A Q GKY QA + + PE Y Sbjct: 385 AAEQTLQGLS--------GEDARYNLANAQAKQGKYDQAIKEYQRILESNPEH---AYA 432 >gi|319902113|ref|YP_004161841.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides helcogenes P 36-108] gi|319417144|gb|ADV44255.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides helcogenes P 36-108] Length = 277 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 16/120 (13%), Positives = 35/120 (29%), Gaps = 14/120 (11%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----------KAVLFLKE 70 K L + V + + + S+ + +DS++ V E + Sbjct: 2 KKTLFFVLVLVVIAINTFAQNSTDTLQIDSISSVEPHAEFSAVKQEGNVTKAEGDSAYMR 61 Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 ++ A + + + A Y AG +A E P + ++ Sbjct: 62 NDYVSAIQIYENLLKK---GEAAE-IYYNLGNSYYKAGDIARAILNYERASLLQPGNTDI 117 >gi|297181850|gb|ADI18029.1| hypothetical protein [uncultured delta proteobacterium HF0200_19J16] Length = 258 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 39/94 (41%), Gaps = 9/94 (9%) Query: 182 VTVGRNQLAAKE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 + ++ L + + +G +L+ G A + ++L Y++ + A+ Sbjct: 153 LVYLQDILKQSDKTPLKAQILMSLGNGFLEHGHATQAAYYYGIILREYTETSNVPNALYY 212 Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 L +A LA ++ + + + + +P+ A+ Sbjct: 213 LGKAMEELAETEKQNVLWNELIKNHPKSPLAKRA 246 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 42/119 (35%), Gaps = 8/119 (6%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ L+ N +A Y + + + L+ G QAA + + Sbjct: 140 GLISLQAGNPDQALVYLQDILKQSDKTPLKAQILMSLGNGFLEHGHATQAAYYYGIILRE 199 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 Y E+ NV Y +G + ++ T+ + +++ + SP K A + Sbjct: 200 YTETSNVPNALYYLGKAMEELAE--------TEKQNVLWNELIKNHPKSPLAKRAIKRL 250 >gi|193215605|ref|YP_001996804.1| tetratricopeptide domain-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193089082|gb|ACF14357.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium ATCC 35110] Length = 231 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 +++ + ++KA YF + +PF +L+M A+ Y KY++A Sbjct: 160 GLIYYGKNEYAKAERYFEKVVNLYPF-DY--DALVMLAWTNYRLKKYREA 206 >gi|78484968|ref|YP_390893.1| hypothetical protein Tcr_0623 [Thiomicrospira crunogena XCL-2] gi|78363254|gb|ABB41219.1| conserved hypothetical protein [Thiomicrospira crunogena XCL-2] Length = 213 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 14/105 (13%) Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 V Q A +L+ +++E +SPY G + I ++Y + Sbjct: 61 QVKQSQNALGDVLRDGLKLMEEQPDSPYASGVA--------------LMIAKHYFDEKAF 106 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 AI +Q + + D A RLV YV + ++A +V++ Sbjct: 107 DKAIENYQWTIEHAPDHSIQLIARLRLVTVYVQEKMFEKADQVLA 151 >gi|78356417|ref|YP_387866.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218822|gb|ABB38171.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 604 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 8/111 (7%) Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 Q + +R P + +Y R++L A+ Y +R A+ FQ + Sbjct: 66 QDFMDVYKRSPRGPLAPKSLYYAGRVRSELGARSYLASDY--RR-----AVEYFQRLANR 118 Query: 220 YSDAEHAEEAMARLVEAY-VALALMDEAREVVSLIQERYPQGYWARYVETL 269 + ++A+ R Y L AR +++ I + QG L Sbjct: 119 FPSHSWTDDALYRAAAIYKDRLGDHGTARSLLNTILRDHQQGDMYYKAIAL 169 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 43/131 (32%), Gaps = 9/131 (6%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + ++++ L +S D +S R + + A N+ + + F Sbjct: 14 LWLVIAVSLACLPAPAGAASLDASFNSA--WRQFHSLTKDARKGKYRDNWLRIEQDFMDV 71 Query: 84 SRDFPFAGVARKSLL-------MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + P +A KSL Y A Y++A + ++P D Y Sbjct: 72 YKRSPRGPLAPKSLYYAGRVRSELGARSYLASDYRRAVEYFQRLANRFPSHSWTDDALYR 131 Query: 137 VGMSYAQMIRD 147 Y + D Sbjct: 132 AAAIYKDRLGD 142 Score = 35.5 bits (81), Expect = 8.8, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 28/79 (35%), Gaps = 5/79 (6%) Query: 118 EEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 ++++ Y P Y G +++ Y + ++Y R+ R+ + + Sbjct: 66 QDFMDVYKRSPRGPLAPKSLYYAGRVRSELGAR-SYLASDYRRAVEYFQRLANRFPSHSW 124 Query: 175 VKGARFYVTVG-RNQLAAK 192 A + +++L Sbjct: 125 TDDALYRAAAIYKDRLGDH 143 >gi|323247654|gb|EGA31600.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] Length = 77 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 8/82 (9%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y+ GK AA + YP+S Y VG+ + D+ T Sbjct: 4 NYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQ 55 Query: 164 RIVERYTNSPYVKGARFYVTVG 185 +++ +Y + K A+ + Sbjct: 56 QVINKYPGTDGAKQAQKRLNAM 77 Score = 35.5 bits (81), Expect = 7.7, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 26/71 (36%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 L + A YF +++P + A ++ + G +A ++ ++ I + Sbjct: 1 GQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINK 60 Query: 124 YPESKNVDYVY 134 YP + Sbjct: 61 YPGTDGAKQAQ 71 >gi|320537415|ref|ZP_08037365.1| cyclic nucleotide-binding domain protein [Treponema phagedenis F0421] gi|320145741|gb|EFW37407.1| cyclic nucleotide-binding domain protein [Treponema phagedenis F0421] Length = 332 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 37/113 (32%), Gaps = 27/113 (23%) Query: 61 YEKAVLFLKEQNFSKAYEYF---------NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 ++ A ++N+ AY + + + + Y +Y Sbjct: 212 FKLAEDLAAQKNWKDAYIQYHSVIETGTDENIEASY----------IGAGHCLYEQREYV 261 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + L +ITQ+P+S + +G+ Y D + LQ+ + Sbjct: 262 RCLQLLTNFITQHPKSLKLAEALMYIGLCY--------RDMKRPDKALQFFDK 306 >gi|307197750|gb|EFN78899.1| RNA polymerase-associated protein CTR9-like protein [Harpegnathos saltator] Length = 1015 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 24/141 (17%) Query: 133 VYYLVGM------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179 Y L+ + + Q +D ++R L +++ + + + Sbjct: 600 AYSLIALGNIWLQTLHQSGKDKEREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHK 659 Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 V R+ A +E + I Y+++ ++V+AI ++ L + H E Sbjct: 660 GCVNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYRYHHV-EV 718 Query: 230 MARLVEAYVALALMDEAREVV 250 + L AY + EA+ + Sbjct: 719 LQYLGRAYFKAGKLKEAKLTL 739 >gi|301058344|ref|ZP_07199377.1| von Willebrand factor type A domain protein [delta proteobacterium NaphS2] gi|300447580|gb|EFK11312.1| von Willebrand factor type A domain protein [delta proteobacterium NaphS2] Length = 598 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 36/88 (40%), Gaps = 3/88 (3%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 D +D+ D+RY+ Y + + +F A F+ + K++ V Sbjct: 373 DQDMDNPRDIRYR---YNRGCADYQASDFKGAMAAFSSVLKRTDDPETRVKAVFNLGNVA 429 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDY 132 Y G + A++ ++ I P ++N Y Sbjct: 430 YKKGDFSAASAYYQQAIVLDPANENARY 457 >gi|15669619|ref|NP_248432.1| O-linked GlnNAc transferase [Methanocaldococcus jannaschii DSM 2661] gi|3183372|sp|Q58823|Y1428_METJA RecName: Full=TPR repeat-containing protein MJ1428 gi|1500309|gb|AAB99438.1| O-linked GlnNAc transferase [Methanocaldococcus jannaschii DSM 2661] Length = 567 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 69/213 (32%), Gaps = 44/213 (20%) Query: 62 EKAVLFLKEQNFSKAYE-YFNQCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +A +L E + KA E Y + A+ Y KY A E Sbjct: 19 TEANYYLDEGIYDKAVECYLKALEKKNTNPIDW-----FNLAYALYHLEKYDSALEAINE 73 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P + Y YL G+ + + I+ Y Y+K A Sbjct: 74 ALKISPSNI---YFAYLKGLIHYKR------------------GEIILAY---KYLKKAS 109 Query: 180 FYV--TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH-AEEAMARLVEA 236 + L G +K G Y A+ + L +Y A A+ + + Sbjct: 110 EKIKNEELFEIL-------GDISVKYGRYEEAL---KYYLKSYKMANSKNLNALFKAGKI 159 Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETL 269 Y+ +D+A + + I ++ P + VE + Sbjct: 160 YLLFGDIDKAYDAFNEILQQNPSHECKKIVECM 192 >gi|22299177|ref|NP_682424.1| hypothetical protein tll1634 [Thermosynechococcus elongatus BP-1] gi|22295359|dbj|BAC09186.1| tll1634 [Thermosynechococcus elongatus BP-1] Length = 581 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 6/68 (8%), Positives = 23/68 (33%), Gaps = 3/68 (4%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ + +A + + + +P ++ L+ ++ +AA + + Sbjct: 222 GEFLAQQGSLKEACAHLEKAASLYPDQPDIQRGLITL---YDRQQQWLEAALAAQRFALL 278 Query: 124 YPESKNVD 131 P+ Sbjct: 279 NPDHPATP 286 >gi|332024785|gb|EGI64973.1| RNA polymerase-associated protein CTR9-like protein [Acromyrmex echinatior] Length = 1225 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 24/141 (17%) Query: 133 VYYLVGM------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179 Y L+ + + Q +D ++R L +++ + + + Sbjct: 600 AYSLIALGNIWLQTLHQSGKDKEREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHK 659 Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 V R+ A +E + I Y+++ ++V+AI ++ L + H E Sbjct: 660 GCVNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHV-EV 718 Query: 230 MARLVEAYVALALMDEAREVV 250 + L AY + EA+ + Sbjct: 719 LQYLGRAYFKAGKLKEAKLTL 739 >gi|330721300|gb|EGG99385.1| hypothetical protein imdm_1171 [gamma proteobacterium IMCC2047] Length = 925 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 30/97 (30%), Gaps = 11/97 (11%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A+ + + + A ++ +M + +Y A + ++ I Q Sbjct: 413 AIGQIASGDINSAISELENAVTR---PDATEQTNIMLILSYLNQQQYDNAFAAIDKAIAQ 469 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 YP+S L ++Y A + Q Sbjct: 470 YPKSPAF---LNLKAIAYENQQNT-----EAAREAYQ 498 >gi|225619426|ref|YP_002720652.1| cAMP-binding protein [Brachyspira hyodysenteriae WA1] gi|225214245|gb|ACN82979.1| cAMP-binding protein [Brachyspira hyodysenteriae WA1] Length = 328 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 27/189 (14%), Positives = 61/189 (32%), Gaps = 28/189 (14%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYY-----LVGMSYAQMIRDVPYD------- 151 + KY+ A + YI + D +Y + ++ D Sbjct: 139 YFKNKKYRNALYAYKRYIQY----ADEDSAFYNTVKEKIEECKDELDITDDSDIAPPVSN 194 Query: 152 --------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ---LAAKE-VEIGRY 199 Q + ++ VE Y N+ YV + + + ++ +A +G+ Sbjct: 195 APVSNAKAQTKATINDPAYNKAVELYNNNDYVNSLKAFNNLIKSSDTAVAENSIFYMGKC 254 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y +Y A + Y + + +EA+ L ++ A +A+ + P Sbjct: 255 YYNINKYDNASTVLLSAIKKYPKSSNVKEAILFLAKSCEASGNKTKAKAYYQKVISMPPM 314 Query: 260 GYWARYVET 268 +++ Sbjct: 315 DNFSKEANA 323 Score = 35.5 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 13/126 (10%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T Y KAV ++ + + FN + VA S+ Y+ KY Sbjct: 204 TKATINDPAYNKAVELYNNNDYVNSLKAFNNLIKS-SDTAVAENSIFYMGKCYYNINKYD 262 Query: 112 QAASLGEEYITQYPESKNVDYV-YYL-----------VGMSYAQMIRDVPYDQRATKLML 159 A+++ I +YP+S NV +L +Y Q + +P +K Sbjct: 263 NASTVLLSAIKKYPKSSNVKEAILFLAKSCEASGNKTKAKAYYQKVISMPPMDNFSKEAN 322 Query: 160 QYMSRI 165 +SR+ Sbjct: 323 ASISRL 328 >gi|166364168|ref|YP_001656441.1| periplasmic protein [Microcystis aeruginosa NIES-843] gi|166086541|dbj|BAG01249.1| periplasmic protein [Microcystis aeruginosa NIES-843] Length = 363 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 81/251 (32%), Gaps = 46/251 (18%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 Q + L + CF + + V+ E+ +A +K N+ + Sbjct: 1 MKQFTRLILLVGLLAGGCFSASIAIADNPAGAI--VSKDSQVNELLRQARQLVKNGNYGE 58 Query: 76 AYEYFN---QCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 A + + F+G F+Q G Y AA ++ ++ P + + Sbjct: 59 AIAIYERAAALDGNNAKIFSG--------IGFLQTRQGDYNAAAQAYQKALSLDPSNPDF 110 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 + G S A I D A +Q + V+ Y Sbjct: 111 FHAL---GYSLAN-IGDYDNAATAYYYAIQIEPKNVQHY--------------------- 145 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 + +G L++ Y A +Q VLA + + A E + +A + EA + + Sbjct: 146 ---LGLGVVLLRQKNYAKAGEVYQWVLALDPNNQQAHE---IMGKALIEQNKSSEALDFL 199 Query: 251 SLIQERYPQGY 261 +R+P Sbjct: 200 QKSLQRFPNNS 210 >gi|91789548|ref|YP_550500.1| hypothetical protein Bpro_3702 [Polaromonas sp. JS666] gi|91698773|gb|ABE45602.1| TPR repeat [Polaromonas sp. JS666] Length = 166 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 39/112 (34%), Gaps = 5/112 (4%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + F++ F ++ V L + D V +V+ + + +N+++A Sbjct: 15 MNAFSIRSFIALPVLGLAFAGAALAADFQTMPVQNVQIDD--FAAGKKAIDAKNWAQAVS 72 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 F++ P + + GKY +A + + + P K Sbjct: 73 SFSKVVARNPTNA---DAYSYLGYANRWLGKYDEAFAAYGKALALDPRHKGA 121 >gi|237716509|ref|ZP_04546990.1| BatE [Bacteroides sp. D1] gi|262408107|ref|ZP_06084655.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294645102|ref|ZP_06722828.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a] gi|294809503|ref|ZP_06768206.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC 1b] gi|298484183|ref|ZP_07002349.1| aerotolerance-related exported protein [Bacteroides sp. D22] gi|229444156|gb|EEO49947.1| BatE [Bacteroides sp. D1] gi|262354915|gb|EEZ04007.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292639608|gb|EFF57900.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a] gi|294443321|gb|EFG12085.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC 1b] gi|298269687|gb|EFI11282.1| aerotolerance-related exported protein [Bacteroides sp. D22] Length = 277 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 13/121 (10%), Positives = 36/121 (29%), Gaps = 13/121 (10%) Query: 19 LYKFALTIFFSIAV-CFLVGWERQSSRDVYLDSVTDVRY--------QREVYEKAVLFLK 69 + K I S+++ CF S+ + + + Sbjct: 1 MKKILFFILLSMSLTCFAQDSLNIDSKQTNGADSIHASHTTFSSNTLEDATKAEGDSAYI 60 Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 +++++ A + + ++ A Y G+ +A E + P + + Sbjct: 61 KEDYAAAIQIYEALLKN---GE-AADVYYNLGNSYYKIGEIAKAVLNYERALLLQPGNGD 116 Query: 130 V 130 + Sbjct: 117 I 117 >gi|269104788|ref|ZP_06157484.1| TPR domain protein in aerotolerance operon [Photobacterium damselae subsp. damselae CIP 102761] gi|268161428|gb|EEZ39925.1| TPR domain protein in aerotolerance operon [Photobacterium damselae subsp. damselae CIP 102761] Length = 691 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 11/85 (12%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 Y D+V D K + K F +A + + Sbjct: 355 QYTDAVKDFSSPAW---KGIAQYKAGQFHQAIKTLEPLKDT--TSRY------NLGNAYA 403 Query: 106 SAGKYQQAASLGEEYITQYPESKNV 130 +G+Y++A + EE + Q P + + Sbjct: 404 QSGQYEKAINTYEEVLKQEPTNTDA 428 >gi|218675993|ref|YP_002394812.1| hypothetical protein VS_II0211 [Vibrio splendidus LGP32] gi|218324261|emb|CAV25553.1| Conserved hypothetical protein [Vibrio splendidus LGP32] Length = 609 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 31/119 (26%), Gaps = 27/119 (22%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----------------KAVLFLKEQNFS 74 + Q + TD + ++Y+ K + K +F Sbjct: 325 CGLAVFVSFSQPNTAFANPWKTDDQVGYQLYQDEDFQQAAEQFEQQEWKGIAQYKAGDFE 384 Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A + S + A Q GKY QA + + PE Y Sbjct: 385 AAEQTLQGLS--------GEDARYNLANAQAKQGKYDQAIKEYQRILESNPEH---AYA 432 >gi|167719468|ref|ZP_02402704.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei DM98] Length = 965 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A L L +F +A F + P A +S + + A + + + Sbjct: 420 RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 476 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + ++ ++Y Sbjct: 477 LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 508 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 +LA+ G Y Y A++ R + H EA+ L Sbjct: 509 VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 562 Query: 240 LALMDEAREVVS 251 + + E+ EV+ Sbjct: 563 VDRLAESEEVLR 574 >gi|325959202|ref|YP_004290668.1| hypothetical protein Metbo_1459 [Methanobacterium sp. AL-21] gi|325330634|gb|ADZ09696.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanobacterium sp. AL-21] Length = 498 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 15/110 (13%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +K + + ++ KA FN+ F ++ FV + +Y++A + ++ I Sbjct: 140 DKGIALKNKNDYYKATACFNRALD---FKAENTRAYYNKVFVFETLKEYEEALKVCDQII 196 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 P S Y +YL G+ Y +M R + L+ ++ + Sbjct: 197 KIDPSS----YAWYLKGIIYGRM--------RRYREALESFDESLKLKPD 234 >gi|325106717|ref|YP_004267785.1| methyltransferase type 11 [Planctomyces brasiliensis DSM 5305] gi|324966985|gb|ADY57763.1| Methyltransferase type 11 [Planctomyces brasiliensis DSM 5305] Length = 1391 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 61/215 (28%), Gaps = 34/215 (15%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + E +E+AV ++ A + P ++L + + + G++ Sbjct: 3 PHIPLADEAFEEAVSIHQQGRLDDAASRYQTILATSPNHA---QALHLLGVIDHQRGEHL 59 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A E + P D V + ++ + + ++ N Sbjct: 60 AAVEKIERALKLKP-----DAVLFRKNLA------SAARSAGQLEKARKSCENVLAAEPN 108 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 P + ++ E ++ A ++ L + E + Sbjct: 109 EP-------VMFTLLGRICETE----------EKWTEAARHYEESLRIGLNNSETLETLL 151 Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 L + Y + +A I +R P W + Sbjct: 152 HLGDCYSKVGRSTDAERCYRDIIDRDP---WHLFA 183 >gi|257452395|ref|ZP_05617694.1| Tetratricopeptide TPR_2 repeat protein [Fusobacterium sp. 3_1_5R] Length = 185 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 8/76 (10%) Query: 70 EQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 ++++ A +F + A+V Y KY++A E+ + P S Sbjct: 51 KKDYDTAIYFFEKLMTLDATNGNWPGF----LAYVYYEQEKYEKAIPYFEKSVDLSPNSP 106 Query: 129 NVDYVYYLVGMSYAQM 144 + Y+L+G SY+++ Sbjct: 107 FI---YFLLGNSYSRL 119 >gi|160893383|ref|ZP_02074169.1| hypothetical protein CLOL250_00933 [Clostridium sp. L2-50] gi|156864958|gb|EDO58389.1| hypothetical protein CLOL250_00933 [Clostridium sp. L2-50] Length = 713 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 61/177 (34%), Gaps = 27/177 (15%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----KAVLFLKEQNFSKAYEYFNQCS 84 I C + G S + V + + Y +A L++ + + A + + Sbjct: 283 LIMFCTMGGLSLASVACAVIGGVKKNEIKEQNYSNKILEAENALQDNDVNNAIKIYKDAI 342 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE----------EYITQYPESKNVDYVY 134 + A LL + + Y + E Y+T+Y K D V Sbjct: 343 ALDETSSDAYLGLLDT-YAYYYDATQDAEKTSSEGMDSGAKLGVRYVTKY-IDKVQDDVV 400 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRI--VERYTNSPYVKGARFYVTVGRNQL 189 Y V + Y I+D K +QY +++ E + + A +Y + N++ Sbjct: 401 YEVAILYYNEIQDY-------KAAMQYFNQVNDKENFPD--EAAQASYYSAICENKI 448 >gi|7020961|dbj|BAA91331.1| unnamed protein product [Homo sapiens] Length = 336 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 45/150 (30%), Gaps = 29/150 (19%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYE 78 L+G D LD + +++ AV NF KA E Sbjct: 70 MATGLVLIGTGSSVKLDKELDLAVKTMVEISRTQPLTRREQLHVSAVETFANGNFPKACE 129 Query: 79 YFNQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDY 132 + Q +D P M A + G +Q YP + ++ Sbjct: 130 LWEQILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPL 178 Query: 133 VYYLVGMSYAQMIRDVPYDQ--RATKLMLQ 160 Y+ G+ ++ YDQ + K L Sbjct: 179 SSYVKGIYSFGLMETNFYDQAEKLAKEALS 208 >gi|116623654|ref|YP_825810.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116226816|gb|ABJ85525.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 748 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 16/124 (12%), Positives = 39/124 (31%), Gaps = 15/124 (12%) Query: 49 DSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 + E Y + ++ + F+ A F + +R P + V + A Sbjct: 454 EVARQKPAPAEFYVELGQAWMSARKFANAIAAFEEAARRSPDSPV---VAVNLADALTEG 510 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G+ ++A ++ I E + Y +G++ R + + + Sbjct: 511 GQPERAIAVLNRAIRATQEDPLL---RYQLGITQTAAGRSA--------EAIAAFRQTIA 559 Query: 168 RYTN 171 + Sbjct: 560 LDPD 563 >gi|326431629|gb|EGD77199.1| hypothetical protein PTSG_08291 [Salpingoeca sp. ATCC 50818] Length = 822 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 21/80 (26%), Gaps = 10/80 (12%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEY 120 K K A + + R +P + ++ +Y +A E Sbjct: 131 KGNEHFKRGEHDSAVDAYTTALRLYPDSLVLYTNRAQ-----AHLKLQQYSEALDDCEWA 185 Query: 121 ITQYPESKNVDYVYYLVGMS 140 + + G++ Sbjct: 186 LRLHDRHPK---ALLRKGLA 202 >gi|307822495|ref|ZP_07652726.1| type IV pilus biogenesis/stability protein PilW [Methylobacter tundripaludum SV96] gi|307736099|gb|EFO06945.1| type IV pilus biogenesis/stability protein PilW [Methylobacter tundripaludum SV96] Length = 253 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 24/113 (21%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-IGRYYLKRGEYVAAIPRFQ 214 + Y + ++ NS Y A E++ I ++G+Y AA + Sbjct: 157 QQAENYFRQALQL--NSTYAA-------------ALSEMQKIA---YEKGDYWAA----K 194 Query: 215 LVLANYSD-AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 L Y A H E + +A AL + ARE +L+ E++P A+ + Sbjct: 195 GFLQRYLGVATHTPETLWFAAQAERALGNKELAREYKNLLLEKFPLSNEAKKI 247 >gi|261879446|ref|ZP_06005873.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270334015|gb|EFA44801.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 1122 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 33/234 (14%), Positives = 67/234 (28%), Gaps = 62/234 (26%) Query: 60 VYEKAVL---FLKEQNFSKAYEYFNQCSRDF-------------------------PFAG 91 +Y L + NF +A E + + + Sbjct: 61 LYTVGNKNSISLGKGNFDRAIEKAEKAIKLHSIKRRPVWNKRGRKTERDIEWLGRKEYNP 120 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 K+ ++ Q+ G + A+S Y Y ++ Sbjct: 121 FLWKAWMLMGRAQFYQGDFDAASSTFSYMARLYETQP----AIYGRAKAW---------- 166 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG-RNQL---AAKE--VEIGRYYLKRGE 205 + + Y + ++ A + R+ + A KE + YY+ + Sbjct: 167 -------------LAKSYIENNFLYDAEDVIRNMQRDSIHWRAQKEWDYTLADYYIHIQQ 213 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYP 258 Y AIP + V+ + + L + AL EA + +I++ P Sbjct: 214 YEQAIPYLKKVIKHEMRKKQKAREYFLLGQLQAALGNHQEAYKAYQKVIRQNPP 267 Score = 35.5 bits (81), Expect = 8.7, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 18/47 (38%) Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 ++ YS E +E L Y A +S ++ YP+ W Sbjct: 607 IVQQYSTFEKMDEVYYHLFLLYSRKGEPQLAESYISRLKSEYPKSQW 653 >gi|283796416|ref|ZP_06345569.1| putative tetratricopeptide repeat-containing domain protein [Clostridium sp. M62/1] gi|291075827|gb|EFE13191.1| putative tetratricopeptide repeat-containing domain protein [Clostridium sp. M62/1] Length = 465 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 11/91 (12%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 ++L A+ +SAG+ A + +T P++ N V + +GM Y ++ Sbjct: 356 QTLEDLAYTMWSAGRMDDALNYYNTCLTIRPDNPN---VLFNMGMIY--------RSKQD 404 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 ++ +++ +Y +S Y + AR +T Sbjct: 405 FAKAVELFTQVSTQYGDSEYAEKARNQLTEL 435 >gi|218661993|ref|ZP_03517923.1| TPR repeat-containing protein [Rhizobium etli IE4771] Length = 592 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 6/86 (6%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G +++ R++ D + + + +L+ + KA + S P +S Sbjct: 51 GRMKEAKREIDTAIALDPSFDIALLARGRYYLQTGDRDKALQDLLAASTANPAHS---QS 107 Query: 97 LLMSAFVQYSAGK---YQQAASLGEE 119 LM A Y G QQA + Sbjct: 108 QLMLAAAHYEKGDRIPSQQALDNADR 133 >gi|150400646|ref|YP_001324412.1| Pyrrolo-quinoline quinone [Methanococcus aeolicus Nankai-3] gi|150013349|gb|ABR55800.1| Pyrrolo-quinoline quinone [Methanococcus aeolicus Nankai-3] Length = 1037 Score = 41.3 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 8/99 (8%), Positives = 35/99 (35%), Gaps = 9/99 (9%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR---KSL 97 ++ + ++ T + + + + + ++ + N+ P A+ + + Sbjct: 239 DNNNEEAIEYKTKIEKILALRQDSEELYRRGEYNHSLSKLNEILDINPNDEYAKHTIQVV 298 Query: 98 LMSAFV------QYSAGKYQQAASLGEEYITQYPESKNV 130 + Y ++ A ++ E + P+ +++ Sbjct: 299 QDMIDLMEEGNKYYINNDFEDAIAIYNEILKLNPKDEHI 337 >gi|303235927|ref|ZP_07322530.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN] gi|302483800|gb|EFL46792.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN] Length = 1176 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 21/54 (38%) Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 A + V NY D E ++ L Y+ A ++ ++ YP+ W Sbjct: 613 AEKNLRRVSDNYPDYEEMDDVYYHLYLLYMRKNQPQLADSYINKLKANYPKSQW 666 >gi|254433450|ref|ZP_05046958.1| type IV pilus biogenesis/stability protein PilW [Nitrosococcus oceani AFC27] gi|207089783|gb|EDZ67054.1| type IV pilus biogenesis/stability protein PilW [Nitrosococcus oceani AFC27] Length = 253 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 31/255 (12%), Positives = 73/255 (28%), Gaps = 26/255 (10%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 + +F + + F SS++ + S+ + + + V + K+ +A + + Sbjct: 2 IGVFAIMLLGFAGCASILSSQEQDIPSIDKEKAAKINVQLGVEYFKQGELEQALKKLERA 61 Query: 84 SRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + P + +LL G+ ++A + I G+ Sbjct: 62 IQQDPKLPSAYNALALLKQ-----RLGQAEEAEKYFQRAIKL---DPEYSEAQNNYGVFL 113 Query: 142 AQMIRDVPYDQR-----------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 + R +L + ++ + +L Sbjct: 114 YNQGHYGDAEARFLEAVKNPLYGTPELAYENAGMAAQKQVEFDKAERYYRKALQLEPRLP 173 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEAMARLVEAYVALALMDEAREV 249 + ++G Y R Q L Y A H +++ + L D Sbjct: 174 KSLYHMAEISFEKGHYQ----RAQEYLQRYRVGARHTPKSLWLGIRIERELGNEDTVSSY 229 Query: 250 VSLIQERYPQGYWAR 264 L++ +P A+ Sbjct: 230 ALLLRRNFPDSPEAK 244 >gi|298243809|ref|ZP_06967616.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963] gi|297556863|gb|EFH90727.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963] Length = 1332 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 34/238 (14%), Positives = 73/238 (30%), Gaps = 44/238 (18%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 ++ RE + + + + A + N+ P ++ A + Sbjct: 1108 EISARRPDPSTAVREYMDLVRHYRQSRQIDNALKVLNELVHLAPQEP---QAHEELADIY 1164 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + G + + + N + Q I ++ + ++ L R Sbjct: 1165 INRGLLDEGIAELRLLVDANLRRNNTAEA-----AATLQRIGNIFDETGDSEEALAAFCR 1219 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL-ANYSDA 223 E NS + + R E+ + + G A R+Q V+ +Y + Sbjct: 1220 AAELDPNS---------MDLLR--------EVVGFCFRVGHPQEAA-RYQAVIARHYFET 1261 Query: 224 EHAEEAMA-----------------RLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 + +EA+A L + Y A+ ++A V + + P AR Sbjct: 1262 QQVKEAVAALQQLITIDRNNFDAYDMLGQTYQAVGEYEQASRVYRNLAKINPGSSIAR 1319 >gi|293371590|ref|ZP_06618004.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f] gi|292633435|gb|EFF52004.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f] Length = 277 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 12/122 (9%), Positives = 37/122 (30%), Gaps = 15/122 (12%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----------KAVLFL 68 + + I S+++ G + S + V + + + Sbjct: 1 MKRILFFILLSMSL-TCFGQDSLSIDTRQTNGVDSIHASHTTFSSNTLEDATKAEGDSAY 59 Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 +++++ A + + ++ A Y G+ +A E + P + Sbjct: 60 IKEDYAAAIQIYEALLKN---GE-AADVYYNLGNSYYKIGEIAKAVLNYERALLLQPGNG 115 Query: 129 NV 130 ++ Sbjct: 116 DI 117 >gi|256027035|ref|ZP_05440869.1| TPR repeat-containing protein [Fusobacterium sp. D11] gi|289765018|ref|ZP_06524396.1| tetratricopeptide repeat family protein [Fusobacterium sp. D11] gi|289716573|gb|EFD80585.1| tetratricopeptide repeat family protein [Fusobacterium sp. D11] Length = 936 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 67/204 (32%), Gaps = 29/204 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K + + + +A F + + ++ K L + A +Y +A GE+Y Sbjct: 508 YLKGIAAMGLGKYDEAEADFQKVLASGDQS-LSTKVYLNRVRNYFLAERYNEAVQAGEQY 566 Query: 121 I-TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P+ + Y L +G+SY ++ + YDQ S Y K Sbjct: 567 LSKITPDKEKAIYSEMLDKIGLSYFRLGK---YDQAR-----------------SYYSKI 606 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A + +I Y Y A ++ V NY + + E+A + + Sbjct: 607 ASMKGYEVYGK-----FQIADSYYNEKNYEKAASLYKEVYNNYGETFYGEQAYYKYIMTL 661 Query: 238 VALALMDEAREVVSLIQERYPQGY 261 D + YP Sbjct: 662 SLTGNTDAFEREKDNFMKVYPNSN 685 >gi|85859052|ref|YP_461254.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB] gi|85722143|gb|ABC77086.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus SB] Length = 569 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 75/220 (34%), Gaps = 33/220 (15%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMS 100 + V D + A L KE+ + A + + Q +R P + A Sbjct: 331 DQSVLKPRTPDSGGLAGLAGLADLDFKERRYGAAVKKYEQLARSSPPRPSIYA-----NL 385 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL--- 157 + Y ++A E+ + + + YY +G +Y ++ R D Sbjct: 386 GYAYTELKNYAESAKNYEKALKAGAKDPQI---YYNLGFAYEKLGR--EKDAIGAYEKYE 440 Query: 158 ----MLQYMSRIVERY-TNSPYVKGARFYVTVGRN--QLAAKEVEIGRYYLKRGEYVAAI 210 LQ + E Y + Y + + Y + RN + AA +G Y ++ Sbjct: 441 KDKPSLQVTQTLAELYLSEKRYDQAIQAYRKLIRNNPKKAAWYASLGYVYGRK------- 493 Query: 211 PRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEA 246 + NY A +E RL EAY + +EA Sbjct: 494 NDINNEIENYRTALRYDPEDDETCYRLAEAYERKGMYEEA 533 >gi|89069366|ref|ZP_01156725.1| hypothetical protein OG2516_15055 [Oceanicola granulosus HTCC2516] gi|89045133|gb|EAR51204.1| hypothetical protein OG2516_15055 [Oceanicola granulosus HTCC2516] Length = 185 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 42/125 (33%), Gaps = 16/125 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++E+ L+ Q+ A E+F P A + A + + A E Sbjct: 68 LFERGSRALEAQDPVAAVEHFTAVIDFAP--DFAE-AYHGRATAYFLLDQTGPALDDLRE 124 Query: 120 YITQYPESKNVDYVYYLVGMS-YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + P + G++ + I D T+ L+ R++ + + +V + Sbjct: 125 VLVLNPRHFGA-----MRGLAIILEQIGD-------TETALEVYRRVLAIHPHLAHVAES 172 Query: 179 RFYVT 183 + Sbjct: 173 VTRLE 177 >gi|332703231|ref|ZP_08423319.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio africanus str. Walvis Bay] gi|332553380|gb|EGJ50424.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio africanus str. Walvis Bay] Length = 565 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 35/243 (14%), Positives = 75/243 (30%), Gaps = 41/243 (16%) Query: 11 IFEAWAYQLYKFALTIFFS--IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68 I ++ + A+ + + I C + + L + Y VY A Sbjct: 4 IKPLAGHKGLRLAMLMLAAPAIISCASMLPTNAGQMEWRLSPSAEASYNYLVYLDAARAG 63 Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 K Q A + + ++ L A +++ GK + AA L ++ + +YP K Sbjct: 64 KAQQADGALSKVLELDKR-------QEVYLELADLKWRLGKTEDAAVLLQDGLVRYPGDK 116 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + D+ Q+ + + + + + + + R + Sbjct: 117 WL-----------TLRLADIYRLQQRYDGAATTLETYLAAHPSDAEALSRQARLALERER 165 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 A + +LA H+ E + +A V LA +A Sbjct: 166 FAQ---------------------ARDILAKLPADRHSPEVLYLRAKAEVGLAQNRKAIA 204 Query: 249 VVS 251 + Sbjct: 205 TLR 207 >gi|237743476|ref|ZP_04573957.1| tetratricopeptide repeat family protein [Fusobacterium sp. 7_1] gi|229433255|gb|EEO43467.1| tetratricopeptide repeat family protein [Fusobacterium sp. 7_1] Length = 936 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 67/204 (32%), Gaps = 29/204 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K + + + +A F + + ++ K L + A +Y +A GE+Y Sbjct: 508 YLKGIAAMGLGKYDEAEADFQKVLASGDQS-LSTKVYLNRVRNYFLAERYNEAVQAGEQY 566 Query: 121 I-TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P+ + Y L +G+SY ++ + YDQ S Y K Sbjct: 567 LSKITPDKEKAIYSEMLDKIGLSYFRLGK---YDQAR-----------------SYYSKI 606 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A + +I Y Y A ++ V NY + + E+A + + Sbjct: 607 ASMKGYEVYGK-----FQIADSYYNEKNYEKAASLYKEVYNNYGETFYGEQAYYKYIMTL 661 Query: 238 VALALMDEAREVVSLIQERYPQGY 261 D + YP Sbjct: 662 SLTGNTDAFEREKDNFMKVYPNSN 685 >gi|218516472|ref|ZP_03513312.1| hypothetical protein Retl8_23901 [Rhizobium etli 8C-3] Length = 309 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 14/100 (14%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 Q ++ + Y +S A F++ +G+Y A F Sbjct: 224 AEQEFNQYIAHYPSSARAADANFWLGEAL--------------YSQGKYNEAAKTFLNAH 269 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 Y +E A E + +L + AL + A + + +RY Sbjct: 270 QKYGSSEKAPEMLLKLGMSLAALDNKETACATLREVSKRY 309 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 14/140 (10%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 + + + + + Y+ A + ++ A + FNQ +P + Sbjct: 181 ANIGSGPIPDANGKTPQQTASLGSEADQYKAAYGHVLSGDYGTAEQEFNQYIAHYPSSAR 240 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP---ESKNVDYVYYLVGMSYAQMIRDVP 149 A + YS GKY +A + ++ + S+ + +GMS A + Sbjct: 241 AADANFWLGEALYSQGKYNEA---AKTFLNAHQKYGSSEKAPEMLLKLGMSLAALDNK-- 295 Query: 150 YDQRATKLMLQYMSRIVERY 169 + + + +RY Sbjct: 296 ------ETACATLREVSKRY 309 >gi|254464115|ref|ZP_05077526.1| hypothetical protein RBY4I_714 [Rhodobacterales bacterium Y4I] gi|206685023|gb|EDZ45505.1| hypothetical protein RBY4I_714 [Rhodobacterales bacterium Y4I] Length = 275 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 24/61 (39%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ ++ A L E + +A E ++ +P + +A + G ++AA Sbjct: 152 EQADFDAAEALLAEGQYQEAAEKLAAFNQAYPGSPLAAAAEFSRGKALDGLGDTREAARA 211 Query: 117 G 117 Sbjct: 212 Y 212 >gi|225164791|ref|ZP_03727020.1| hypothetical protein ObacDRAFT_6016 [Opitutaceae bacterium TAV2] gi|224800604|gb|EEG18971.1| hypothetical protein ObacDRAFT_6016 [Opitutaceae bacterium TAV2] Length = 1672 Score = 41.3 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 25/85 (29%), Gaps = 17/85 (20%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAY---EYFNQCSRDFPFAG---------VAR 94 + D D +YE A+ + + A + + R P+ R Sbjct: 1021 FADKDPDNTTATRLYEHALGLFMGEEYEAAESVFQRLERIDRRMPYGKAIESIKANIHFR 1080 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEE 119 ++ LM + +A + Sbjct: 1081 RAQLMRI-----QNRIPEAIAEAHR 1100 >gi|307252293|ref|ZP_07534190.1| hypothetical protein appser6_8110 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860215|gb|EFM92231.1| hypothetical protein appser6_8110 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 391 Score = 40.9 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LD+ D ++++ K A F+ + +A Y+ + A SL V Sbjct: 96 LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 152 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++++A ++ E+ I P++ + +Y YAQ I++ D L +S+ Sbjct: 153 QKTKEWKKAINVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 205 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +E A + +G YYL + ++ +A+ ++ +L D Sbjct: 206 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYERILQQDPD-- 246 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256 E + ++ Y +A D A + LI+ Sbjct: 247 FISEVIEKIKACY--MAENDLANYELFLIRAN 276 >gi|303244037|ref|ZP_07330376.1| TPR repeat-containing protein [Methanothermococcus okinawensis IH1] gi|302485689|gb|EFL48614.1| TPR repeat-containing protein [Methanothermococcus okinawensis IH1] Length = 456 Score = 40.9 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 34/111 (30%), Gaps = 9/111 (8%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A+ + +A + ++ FP + ++ A G A + I Sbjct: 258 AAICAYHLGKYDEAIKLCSEIPSKFPDSAYVGEAYRYMAISNMKKGNKNNAIKYLNDDIK 317 Query: 123 QYPE-------SK-NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 S ++ Y+ G+SY +I + D K + + Sbjct: 318 TCTNALTSKDTSPSDIPGAYFERGLSYY-LIGEYTNDTTYYKKAMNDFEYL 367 >gi|260829275|ref|XP_002609587.1| hypothetical protein BRAFLDRAFT_87801 [Branchiostoma floridae] gi|229294949|gb|EEN65597.1| hypothetical protein BRAFLDRAFT_87801 [Branchiostoma floridae] Length = 738 Score = 40.9 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 2/55 (3%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-MSAFVQYSAGKYQQA 113 +Y L + +S+A E + + R P + A +SL M + + +A Sbjct: 515 IYNLGRLQHDQGRYSEAIETYMEAIRRRP-SHYAPQSLYNMLGESLFKNSQLAEA 568 >gi|303251471|ref|ZP_07337647.1| hypothetical protein APP6_0676 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302649703|gb|EFL79883.1| hypothetical protein APP6_0676 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 398 Score = 40.9 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LD+ D ++++ K A F+ + +A Y+ + A SL V Sbjct: 103 LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 159 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++++A ++ E+ I P++ + +Y YAQ I++ D L +S+ Sbjct: 160 QKTKEWKKAINVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 212 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +E A + +G YYL + ++ +A+ ++ +L D Sbjct: 213 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYERILQQDPD-- 253 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256 E + ++ Y +A D A + LI+ Sbjct: 254 FISEVIEKIKACY--MAENDLANYELFLIRAN 283 >gi|291230778|ref|XP_002735342.1| PREDICTED: FK506 binding protein 52-like, partial [Saccoglossus kowalevskii] Length = 388 Score = 40.9 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 53/167 (31%), Gaps = 27/167 (16%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC------SRDFPFAGVAR 94 ++ +D ++ + K + K N+ KA + + + R+ + Sbjct: 175 KAKESWEMDLDEKMKSSEVIKAKGTEYFKSGNYLKAIKQYKKIVDYLSSERETEMPPETQ 234 Query: 95 K--------SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 K + L A G+ QA + ++ + +++ Y+ G Sbjct: 235 KECDKLVLAANLNLAMCYLKIGEEVQAVDVCDKALQIDNKNEKG---YFRRG-------- 283 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Q +L + ++E N+ K + V + KE Sbjct: 284 SARLIQNELQLAAEDFQTVLELEPNNKAAK--NQLILVCKKMKLQKE 328 >gi|78224670|ref|YP_386417.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] gi|78195925|gb|ABB33692.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 341 Score = 40.9 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 48/181 (26%), Gaps = 55/181 (30%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 I + + G S+ +E+A + ++ + + Q Sbjct: 46 IGILVTPMLMAGCGHLQSKPT--------------FEEANDLFNQGSYQASLSKYEQIVD 91 Query: 86 DFPFAGVARKSLLMSA--FVQYSAG--KYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 P ++L + YQ++ + I YP S+ Sbjct: 92 QQP--AAGDRALFEMGIVYSYPKNERKDYQKSLECFQRVIKDYPG-------------SH 136 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-----RFYVTVGRNQLAAKEVEI 196 + Q M+ + VK A + + + +L KE EI Sbjct: 137 YRQNS-------------QTMASYINTVP----VKDATIATQQTRIEALQRELTGKEDEI 179 Query: 197 G 197 Sbjct: 180 A 180 >gi|325108079|ref|YP_004269147.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] gi|324968347|gb|ADY59125.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] Length = 693 Score = 40.9 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 67/219 (30%), Gaps = 46/219 (21%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 +F ++F + + + S D + + LK NF +A + F Sbjct: 27 RFTSSLFGKKSSDHTLAQDDAESGKATSDKTSLASNSSSPFNAGEAALKAGNFREAKKQF 86 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD----YVYYL 136 + + P A L A Y A + P++ ++ Y Y L Sbjct: 87 QKVVQQDPNNATAHHRLAYLAD---MDKDYSIAEIHYLAALRIEPKNADIACDLGYSYLL 143 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 Q + +Y+ + + N Y K + + Sbjct: 144 ---------------QERSDDSRRYLEKALRFDPNHHYAK-----------------MNL 171 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + ++G+Y AA+ + ++ EEA A + + Sbjct: 172 ATLHSQQGDYAAAMAMLRQAVSE-------EEAQAHIAQ 203 >gi|301775374|ref|XP_002923098.1| PREDICTED: serine/threonine-protein phosphatase 5-like [Ailuropoda melanoleuca] gi|281353700|gb|EFB29284.1| hypothetical protein PANDA_012187 [Ailuropoda melanoleuca] Length = 499 Score = 40.9 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 25/153 (16%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQ 104 + ++ E+ +A + K +++ A ++++Q P +SL Sbjct: 18 EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSL-----AY 72 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y A + I + Y+ YY S + + L+ Sbjct: 73 LRTECYGYALADATRAIEI-----DKKYIKGYYRRAASNMAL--------GKFRAALRDY 119 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 +V+ + A+ + K E Sbjct: 120 ETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149 >gi|254409523|ref|ZP_05023304.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196183520|gb|EDX78503.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 385 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 17/145 (11%), Positives = 42/145 (28%), Gaps = 42/145 (28%) Query: 62 EKAVLFLKEQNFSKAYEYF-NQCS-------------------RDFPF--AGVARKSLLM 99 K + +K N+++A + + +P + + L Sbjct: 61 NKGMSLIKAGNYAEAVKAYDQAIEINGESADAWMGRGFALYGLEKYPEAVTAFNQATELD 120 Query: 100 ---------SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 GK + A + ++ + P S D+ ++ G++ ++ Sbjct: 121 PSLVGAWVGLGMALDDTGKPEDALAAYDQALKVNPNS---DWAWFHRGITLGRL----ER 173 Query: 151 DQRATKLMLQYMSRIVERYTNSPYV 175 DQ L+ + V + Sbjct: 174 DQ----EALEAYDQAVRIDPDYERA 194 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 64/200 (32%), Gaps = 38/200 (19%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110 D Y+R + + + ++ + + +A F + R P + M + Sbjct: 188 DPDYERAWFNRGYILVELERYPEAETSFAEVVRINPNSEPGW-----FMRGLALLEMEQN 242 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A E + PE+ N +Y G+ + D + R+V+ Sbjct: 243 NTALKAFERVLLINPENAN---AWYNKGIILENLDGDDW-------AIFTVFDRVVQLIP 292 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE--HAEE 228 + A + G L + Y A+ + +L D+E Sbjct: 293 D-----DAGGWFKRGNALL------------RLDRYADALNSYDRMLELEPDSEVGWYNR 335 Query: 229 --AMARLVEAYVALALMDEA 246 A+A L + A+A DEA Sbjct: 336 GIALALLERYHDAIASFDEA 355 >gi|171689182|ref|XP_001909531.1| hypothetical protein [Podospora anserina S mat+] gi|170944553|emb|CAP70664.1| unnamed protein product [Podospora anserina S mat+] Length = 846 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 22/139 (15%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSA 107 D + Y ++++Q + KAYE + Q P + Y Sbjct: 245 AADNSDAQSWYLLGRCYMQQQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQI 298 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y+ A I P + V+Y +G + + + D L R E Sbjct: 299 NQYRDALDAYSRAIRLNP---FISEVWYDLG-TLYESCNNQIAD------ALDAYQRAAE 348 Query: 168 RYTNSPYVKGARFYVTVGR 186 N+P+V + + + R Sbjct: 349 LDPNNPHV---KSRLQLLR 364 >gi|325295409|ref|YP_004281923.1| tetratricopeptide repeat domain protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065857|gb|ADY73864.1| tetratricopeptide repeat domain protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 644 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + ++YEK V L+ ++S A EYF + P + K+LLM + Y GK Sbjct: 25 KTEKESKLYEKGVKQLEIGSYSTALEYFLRLLN--PQSKYYEKTLLMLSKTYYGIGK 79 >gi|217978527|ref|YP_002362674.1| peptidase C14 caspase catalytic subunit p20 [Methylocella silvestris BL2] gi|217503903|gb|ACK51312.1| peptidase C14 caspase catalytic subunit p20 [Methylocella silvestris BL2] Length = 778 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 31/77 (40%), Gaps = 5/77 (6%) Query: 59 EVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++Y + + + + +A +++ R A K+ +Y + +A + Sbjct: 132 DLYNSRGAALVNKGEYDRAIADYDKAIRLN--GKFA-KAFYNRGQARYLKNQPDRAIADF 188 Query: 118 EEYITQYPESKNVDYVY 134 +E+I P ++ YV Sbjct: 189 DEFIKLSP-NEAKGYVQ 204 >gi|307152146|ref|YP_003887530.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822] gi|306982374|gb|ADN14255.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822] Length = 176 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 51/141 (36%), Gaps = 16/141 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKY 110 + +E YE L+L ++ + ++ F + + K+L+ + Y+ +Y Sbjct: 48 EKGTAKEYYELGSLYLDKKLYVQSVNLFQKALKADDDIETENKALIYNALGYTYYAQEQY 107 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + A +E I YPE Y++ ++ + D + L+ ++ Sbjct: 108 ELAIRNYKEAIKLYPE--------YVIALNNLANVYDKK---QMAAKALETYEETLKVDP 156 Query: 171 NSPYVKGARFYVTVGRNQLAA 191 N+ A+ R + Sbjct: 157 NNSL---AKRRAESLRKRFVE 174 >gi|94501051|ref|ZP_01307575.1| hypothetical protein RED65_05329 [Oceanobacter sp. RED65] gi|94426798|gb|EAT11782.1| hypothetical protein RED65_05329 [Oceanobacter sp. RED65] Length = 914 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 21/172 (12%), Positives = 63/172 (36%), Gaps = 24/172 (13%) Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVG-MSYAQM----IRDVPY-DQRATK----LM 158 ++A ++++ P + +V + + + + DV DQ+ + Sbjct: 29 DTKEAIRRYQQFLQLAPNNDTRVHVMHRLADLKLMDLEEILSEDVEKVDQKQVEAVYDEA 88 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + R+++ + N + + + Y +G+ V+++ Q ++A Sbjct: 89 ITTYERVLKLFPNRLDSDMLLYQL--------------AKVYSLKGDSVSSLNALQRLVA 134 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + +E E+ R+ + Y L D A + + ++ + + ++ Sbjct: 135 RFEKSELLMESYYRMGDIYFTLGQYDNAERSFAKVTQQSSDNRFYLSAQYMM 186 >gi|118346323|ref|XP_977150.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89288407|gb|EAR86395.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 1766 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 51/136 (37%), Gaps = 19/136 (13%) Query: 44 RDVYLDSVTDVRYQREV---YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 + + + + + Y++E Y KA + F ++ + + + P + L Sbjct: 281 QKINVQQLKEEYYEQEFIDKYNKARNLYSDGRFQESIQLLKEAFKIDPSSYYC----LNL 336 Query: 101 AFVQY-SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y +Y++A ++ I +PE+ VY +G Y + + ++ + Sbjct: 337 IGNNYLENKQYEEAIDYYKKSINIFPEN---AIVYKQLGHCYFNL--------KQYEIAI 385 Query: 160 QYMSRIVERYTNSPYV 175 + + + +E + Sbjct: 386 ENLKKSIEYNPEYSHA 401 >gi|145478081|ref|XP_001425063.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124392131|emb|CAK57665.1| unnamed protein product [Paramecium tetraurelia] Length = 1339 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 60/192 (31%), Gaps = 29/192 (15%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 Y +Y K V + A FN+ + P + + + + K+ +A Sbjct: 477 DYADGLYNKGVALCNLNQYEDAIRQFNKAIQLKPKNEC-KFAFINRGICLKNLKKFNEAI 535 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 +E I + +V+ +YY G ++ + + +Q + ++ S Y Sbjct: 536 QNYDEAIQL-SQGTDVEDIYYFKGNCLLELNK--------YEDAIQLYDQAIQL--ESVY 584 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 A F + Y + AI +Q + S A L Sbjct: 585 SSSANFQKGIA--------------YTNLKHFDDAIQSYQHAIEQNSQNSWAY---FNLG 627 Query: 235 EAYVALALMDEA 246 Y L ++A Sbjct: 628 ITYYNLENYEQA 639 >gi|124024108|ref|YP_001018415.1| hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT 9303] gi|123964394|gb|ABM79150.1| Hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT 9303] Length = 733 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 12/109 (11%), Positives = 31/109 (28%), Gaps = 31/109 (28%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFP------FAGVARKSLLMSAFV 103 + Y ++L + N A +F + ++P + K L +A Sbjct: 282 KTDFPEVYYNLGSIYLDQGNIETAINFFKKALILKENYPEALNNLGNSLQEKGELDAAIA 341 Query: 104 QYS----------------------AGKYQQAASLGEEYITQYPESKNV 130 Y G + + + ++ + +P+ + Sbjct: 342 AYKKALNHKPSYREAQNNLGCVYRAQGDLENSIRIFKKALALHPDHPEI 390 >gi|227820344|ref|YP_002824315.1| TonB-dependent receptor [Sinorhizobium fredii NGR234] gi|227339343|gb|ACP23562.1| putative exported protein, TonB-dependent receptor protein [Sinorhizobium fredii NGR234] Length = 1198 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 31/102 (30%), Gaps = 16/102 (15%) Query: 101 AFVQYSAG---KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 A Y A + A + + + P S + I V D+ + Sbjct: 412 ARAHYRADIENDLEGALADLQRALETAPGSPTI-----------WNAIGIVQGDRGDNRA 460 Query: 158 MLQYMSRIVERYTNSP--YVKGARFYVTVGRNQLAAKEVEIG 197 + + +E P + A Y+ R A +E++ Sbjct: 461 AERAFKKAIELDPADPNYHANLAIQYLGELRVAEAKREIDAA 502 Score = 39.3 bits (91), Expect = 0.64, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 30/96 (31%), Gaps = 9/96 (9%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 ++ R++ D + + + L+ + KA E S P A + ++ Sbjct: 494 EAKREIDAALAVDPSFDIVLVARGWYQLQNGDVEKAVEDLLAGSTANP--AFAG-AQMLL 550 Query: 101 AFVQYSAGKY---QQAASLGEEYITQYPESKNVDYV 133 A Y G + QA + P V Sbjct: 551 AAAYYEKGDHGPAAQALDSADR---LDPNDPVVPMA 583 >gi|300775931|ref|ZP_07085791.1| possible TPR repeat-containing protein [Chryseobacterium gleum ATCC 35910] gi|300505481|gb|EFK36619.1| possible TPR repeat-containing protein [Chryseobacterium gleum ATCC 35910] Length = 550 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 53/171 (30%), Gaps = 28/171 (16%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE----------VYEKAVLFLKEQNFSKAY 77 +A G Q+ D + T +++ +++ A + +N++ A Sbjct: 390 LELANIAGGGGASQAEADKGPTNPTIEALKKQVAANSQDSDALFKLATAYQNAKNWNGAI 449 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ-YPESKNV-----D 131 + + S P A + + AG + A E++I+ P + Sbjct: 450 LTWQKMSALLP--DWAP-AYYSQGYSYQQAGNNEAAKLAYEKFISTVKPADQEANKQTLA 506 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 Y Y+ ++Y D Y+++ ++ + Sbjct: 507 YAYF--AVAYMSKDSDPA-------KAKDYVAKSLQLDPTYQDAVKLNAEI 548 >gi|207109110|ref|ZP_03243272.1| hypothetical protein HpylH_07281 [Helicobacter pylori HPKX_438_CA4C1] Length = 103 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 4/79 (5%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IG 197 S+ ++ DQ + + +E+Y NS Y + + L E+ I Sbjct: 3 SHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYM--QIKFILGQNELNRAIA 60 Query: 198 RYYLKRGEYVAAIPRFQLV 216 Y KR + + + Sbjct: 61 NVYKKRHKPEGVKRYLERI 79 >gi|119181833|ref|XP_001242098.1| hypothetical protein CIMG_05994 [Coccidioides immitis RS] Length = 478 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 30/232 (12%), Positives = 71/232 (30%), Gaps = 54/232 (23%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYSAG 108 ++ + + ++ +A ++ + + P + ++ Sbjct: 4 AEIEAATALKVAGNKAFAKHDWPEALGFYTKAIEKYDRDP-SFWCNRAQ-----ANIKLE 57 Query: 109 KYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y A + + I P Y Y+ ++ ++ + L+ +V Sbjct: 58 AYGYAIADATKAIELDPS-----YVKAYWRRAVANTAILNS--------REALKDFKTVV 104 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + N A+ + ++R E+ AI + A Sbjct: 105 RKAPNDR---DAKLKLAECEKL------------VRRIEFEKAIEVAE--------PPSA 141 Query: 227 EEAMAR----LVEAYVALALMDE-AREVVSLIQERYPQGYW--ARYVETLVK 271 E + + E+Y + L DE +E + + ER+ G +Y +VK Sbjct: 142 FEGLDIEAIKVEESYDGVHLGDEMTQEFIDDMIERFKNGKKIHKKYAYKIVK 193 >gi|325474465|gb|EGC77652.1| TPR domain-containing protein [Treponema denticola F0402] Length = 415 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 33/264 (12%), Positives = 73/264 (27%), Gaps = 54/264 (20%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S +++ + E+ ++A LK + ++A F + P +L+ Sbjct: 46 SDEIFSPEDSKQVEISELSKQAYSLLKGNSITEAINVFKKILELDPTNNY---ALVGLGD 102 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY--AQMIR-------------- 146 + K+ +A ++ + +P + Y + + Y Sbjct: 103 AERKNNKFNEAIKFYKQCLEHHPSNN---YALFGLADCYKSMNQFPRAIAIWEEYLKFDD 159 Query: 147 ----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV----GRNQLAAK 192 D + + + +++E+ + Y ++ R L Sbjct: 160 KNITVLTRVADAYRKTKEFEKAEKLYQKVLEKSPKNAYALIGLGHLNYDFKKYREALVYW 219 Query: 193 E---------------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 E IG Y K + + F+ L D + + L + Y Sbjct: 220 EKVMESSGELVDIRILTSIGNCYRKMKLFDRGVYYFERALERSPDNFY---GLFGLADCY 276 Query: 238 VALALMDEAREVVSLIQERYPQGY 261 L + I E P Sbjct: 277 RGLNQQYNSIVYWKKILELDPNNK 300 >gi|312129845|ref|YP_003997185.1| tetratricopeptide tpr_1 repeat-containing protein [Leadbetterella byssophila DSM 17132] gi|311906391|gb|ADQ16832.1| Tetratricopeptide TPR_1 repeat-containing protein [Leadbetterella byssophila DSM 17132] Length = 712 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 65/169 (38%), Gaps = 17/169 (10%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 ++A ++++ Q+P+S V Y + +S + +++ QY R+ Sbjct: 553 KFRDEKKADESFKQFLEQFPKSSYEPEVLYFLALSQSNPLQN------------QYAQRL 600 Query: 166 VERYTNSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 ++ Y + + + R +T R A + + + G+ A+ + + Y Sbjct: 601 LKEYPMTSFGRQMRKGSVVMTQDREVAAQRIYQTAYNLYESGKMEEALKTLEEGMNEYVG 660 Query: 223 AEHAEEAMARL-VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + H E+ MA L + A L DE + ++ YP ++ Sbjct: 661 S-HLEDKMALLRIYALAKLGAKDEYQIALTDFVRSYPSSELLNKAREML 708 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 9/73 (12%), Positives = 27/73 (36%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + +Y+ A + +A + + ++ + + K L+ + G + Sbjct: 627 AAQRIYQTAYNLYESGKMEEALKTLEEGMNEYVGSHLEDKMALLRIYALAKLGAKDEYQI 686 Query: 116 LGEEYITQYPESK 128 +++ YP S+ Sbjct: 687 ALTDFVRSYPSSE 699 >gi|282881718|ref|ZP_06290381.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1] gi|281304477|gb|EFA96574.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1] Length = 656 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 27/249 (10%), Positives = 74/249 (29%), Gaps = 63/249 (25%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPF 89 A+C + + ++ + Y KA ++L +++ + A ++ ++ + P+ Sbjct: 132 AICLMNDKQYAKAQLQTDTIIHKWSQNANAYTLKAEIYLHQKDTTSAAKWLDKSLKVDPY 191 Query: 90 --AGVARKSLLMSAFVQYSAGKYQQ-----------------------------AASLGE 118 + ++ + A Q+ + A S + Sbjct: 192 DGSTWTMRAYISLARQQWKEADKELSQAIHLKPNQANNYVNRALARLNYNNLRGAMSDYD 251 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + P+ +Y G+ Q+ D ++ +++ + Sbjct: 252 MALDLNPQDFL---AHYNRGLLRMQLGDD--------NRAIEDFDFVIKLEPKN------ 294 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 V N+ + G AAI + V+ + + ++ Y Sbjct: 295 ---VMAIFNR--------ALLLDRTGNLRAAIRDYSAVIEQFPN---FWTGLSYRAHCYR 340 Query: 239 ALALMDEAR 247 L ++ +A Sbjct: 341 RLGMIAKAE 349 >gi|262199637|ref|YP_003270846.1| hypothetical protein Hoch_6484 [Haliangium ochraceum DSM 14365] gi|262082984|gb|ACY18953.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM 14365] Length = 1257 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 58/187 (31%), Gaps = 31/187 (16%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFN----QCSRDFPFAGVARKSLLMSAFVQYSAG 108 + +L + ++ F A E F+ ++ +++ + A Sbjct: 1094 GTSPASQHLAAGLLAMAKREFDTAQERFDQAVAALEEAQATPRQFARAHILAGRALFQAD 1153 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + + A+ E I P Y+++GM V Y + + +ER Sbjct: 1154 ELRDASKALERAIRLDPADPE---PYFVLGM--------VEYGRGEYEAAADAFEASLER 1202 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 +S A +G L+R + A F+ L D AE+ Sbjct: 1203 --DSESTPKAW--------------FYLGEVELERKKERDAKKAFRAFLERVDDGPEAEQ 1246 Query: 229 AMARLVE 235 A L E Sbjct: 1247 AQRYLRE 1253 >gi|167824071|ref|ZP_02455542.1| hypothetical protein Bpseu9_10360 [Burkholderia pseudomallei 9] Length = 1240 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 50/192 (26%), Gaps = 40/192 (20%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A L L +F +A F + P A +S + + A + + + Sbjct: 695 RAELALDTGDFDEALSQFERLREQRP---DAPESYANLIPALAALERRDDAIAALQRALE 751 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + ++ ++Y Sbjct: 752 LNSKHPG--------ALNNGVQ-----------------FYLRTQQY---DKAMELAQRY 783 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEY---VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 +LA+ G Y Y A++ R + H EA+ L Sbjct: 784 VGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIE------PHNAEALFALGTVLER 837 Query: 240 LALMDEAREVVS 251 + + E+ EV+ Sbjct: 838 VDRLAESEEVLR 849 >gi|110738736|dbj|BAF01292.1| putative O-GlcNAc transferase [Arabidopsis thaliana] Length = 808 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 51/158 (32%), Gaps = 17/158 (10%) Query: 14 AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73 WAY L + + + ++ +V + R+ + T R + + + Sbjct: 304 QWAYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCPTHFRALKLL---GSALFGVGEY 360 Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A + + A + A +S G+ ++A + + I P + Sbjct: 361 RAAVKALE--EAIYLKPDYA-DAHCDLASSLHSMGEDERAIEVFQRAIDLKPGHVD---A 414 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 Y +G Y D + + +R++ + N Sbjct: 415 LYNLGGLYM--------DLGRFQRASEMYTRVLTVWPN 444 >gi|84994186|ref|XP_951815.1| cyclophilin [Theileria annulata strain Ankara] gi|65301976|emb|CAI74083.1| cyclophilin, putative [Theileria annulata] Length = 384 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 11/144 (7%), Positives = 43/144 (29%), Gaps = 30/144 (20%) Query: 63 KAVLFLKEQNFSKAYE-YFNQCSRDFPFAGVARKSL-----------LMSAFVQYSAGKY 110 + N+ A Y + +S+ L + ++ Sbjct: 66 DGNNKFSQGNYRGAISMYLEGLEYLSESSEWPDESMKLANTTKLQCYLNLSNCYLKVSEF 125 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMS--YAQMIRDVPYDQRATKLMLQYMSRIVER 168 + A E + ++ N+ + ++ ++ ++ ++ +++ Sbjct: 126 RDAEKNASEALKL--DNHNIK-ALFRRALARLNYDILDG----------AIEDLNSLLKL 172 Query: 169 YTNSPYVKGARFYVTVGRNQLAAK 192 N+ + Y+ + + + A+ Sbjct: 173 DPNN---LDGQKYLKLAKQKQASY 193 >gi|15220436|ref|NP_172007.1| calcium-binding EF hand family protein [Arabidopsis thaliana] gi|75318061|sp|O23052|Y1515_ARATH RecName: Full=Uncharacterized TPR repeat-containing protein At1g05150 gi|2388582|gb|AAB71463.1| Contains similarity to Rattus O-GlcNAc transferase (gb|U76557) [Arabidopsis thaliana] gi|332189674|gb|AEE27795.1| Calcium-binding tetratricopeptide family protein [Arabidopsis thaliana] Length = 808 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 51/158 (32%), Gaps = 17/158 (10%) Query: 14 AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73 WAY L + + + ++ +V + R+ + T R + + + Sbjct: 304 QWAYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCPTHFRALKLL---GSALFGVGEY 360 Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A + + A + A +S G+ ++A + + I P + Sbjct: 361 RAAVKALE--EAIYLKPDYA-DAHCDLASSLHSMGEDERAIEVFQRAIDLKPGHVD---A 414 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 Y +G Y D + + +R++ + N Sbjct: 415 LYNLGGLYM--------DLGRFQRASEMYTRVLTVWPN 444 >gi|307254553|ref|ZP_07536387.1| hypothetical protein appser9_7990 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306862490|gb|EFM94450.1| hypothetical protein appser9_7990 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] Length = 338 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LD+ D ++++ K A F+ + +A Y+ + A SL V Sbjct: 43 LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 99 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++++A ++ E+ I P++ + +Y YAQ I++ D L +S+ Sbjct: 100 QKTKEWKKAINVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 152 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +E A + +G YYL + ++ +A+ ++ +L D Sbjct: 153 TLEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYEHILQQDPD-- 193 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256 E + ++ Y +A D A + LI+ Sbjct: 194 FISEVIEKIKACY--MAENDLANYELFLIRAN 223 >gi|157737822|ref|YP_001490506.1| hypothetical protein Abu_1588 [Arcobacter butzleri RM4018] gi|157699676|gb|ABV67836.1| conserved hypothetical protein [Arcobacter butzleri RM4018] Length = 314 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 41/144 (28%), Gaps = 27/144 (18%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC--------SRDFPFAGVARKSLLMSA 101 V + ++ +A + ++ A + + +F + Sbjct: 190 EVKTAEDKAKLMSEAKKDYDAKAYTTAIPKYEKLIEVNYKPAENNFYLGEM--------- 240 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 Y KY A S ++ D Y+ + I + + + Sbjct: 241 --WYKRKKYDTAISHFKKSAMLN------DKAAYMPTLLLHSAISFEN--VKDKENAKSF 290 Query: 162 MSRIVERYTNSPYVKGARFYVTVG 185 ++E Y NS K A+ ++ Sbjct: 291 YGTLIELYPNSSEAKEAKTKLSKL 314 >gi|289643933|ref|ZP_06476036.1| Tetratricopeptide domain protein [Frankia symbiont of Datisca glomerata] gi|289506262|gb|EFD27258.1| Tetratricopeptide domain protein [Frankia symbiont of Datisca glomerata] Length = 216 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 46/131 (35%), Gaps = 20/131 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + V L N + A + P + R++ A Q+ AG+Y A E + Sbjct: 97 YTRGVALLDRGNANAAVQLLAHAVAAEPGSRSVREA---LARAQFDAGQYGAAR---ESF 150 Query: 121 --ITQY-PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 I + P DY + +GM+ + +++++ V + + Sbjct: 151 AWIVAHDPTD---DYAQFGLGMA--------ARRTGDLRAAVEHLALAVAMRPDLGHYGQ 199 Query: 178 ARFYVTVGRNQ 188 A V N+ Sbjct: 200 ALRGVRAALNR 210 >gi|126325275|ref|XP_001366322.1| PREDICTED: similar to ubiquitously transcribed tetratricopeptide repeat, X chromosome isoform 1 [Monodelphis domestica] Length = 1400 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 23/196 (11%), Positives = 49/196 (25%), Gaps = 54/196 (27%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 105 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 151 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + LA + I Sbjct: 152 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFHLALVDCNPCTLSNAEIQFHIAH 211 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEA-----MARLVEAYVALALMDEAREVV-SL 252 Y + +Y +A ++ +L + +A + + L Sbjct: 212 LYETQRKYHSAKEAYEQLLQT-ENLPAQVKATVLQQLGWMHHTVDQLGDKATKESYAIQY 270 Query: 253 IQERY---PQG--YWA 263 +Q+ P W Sbjct: 271 LQKSLEADPNSGQSWY 286 >gi|126325277|ref|XP_001366383.1| PREDICTED: similar to ubiquitously transcribed tetratricopeptide repeat, X chromosome isoform 2 [Monodelphis domestica] Length = 1223 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 23/196 (11%), Positives = 49/196 (25%), Gaps = 54/196 (27%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 105 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 151 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + LA + I Sbjct: 152 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFHLALVDCNPCTLSNAEIQFHIAH 211 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEA-----MARLVEAYVALALMDEAREVV-SL 252 Y + +Y +A ++ +L + +A + + L Sbjct: 212 LYETQRKYHSAKEAYEQLLQT-ENLPAQVKATVLQQLGWMHHTVDQLGDKATKESYAIQY 270 Query: 253 IQERY---PQG--YWA 263 +Q+ P W Sbjct: 271 LQKSLEADPNSGQSWY 286 >gi|75909260|ref|YP_323556.1| lytic transglycosylase catalytic subunit [Anabaena variabilis ATCC 29413] gi|75702985|gb|ABA22661.1| Lytic transglycosylase, catalytic [Anabaena variabilis ATCC 29413] Length = 731 Score = 40.9 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 75/217 (34%), Gaps = 28/217 (12%) Query: 55 RYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + R +Y A + +N +A + Q + FP A L+ A + A Sbjct: 259 KTARNLYRTARGWQVGGKNREQAISTYKQLVQQFPDARETGLGLVRLAE---MTKTNKDA 315 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + I ++PE + + I D++A + Q +++ +Y S Sbjct: 316 LPYLNQVIAKFPEQAS-------QALVKKAEILTALKDEKAAQQTWQ---QLITKYAKSD 365 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 R+ N L K +Y +A Q ++ N ++ A A L Sbjct: 366 EAAEYRWK-----NALEK---------AKARDYTSAWKWAQPIVINNPNSILAPRAGFWL 411 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + A+ EA+ + ++P Y+A L+ Sbjct: 412 GKWAAAVGKQQEAQTAYEYVISQFPYSYYAWRSANLL 448 >gi|299140495|ref|ZP_07033633.1| hypothetical protein HMPREF0665_00042 [Prevotella oris C735] gi|298577461|gb|EFI49329.1| hypothetical protein HMPREF0665_00042 [Prevotella oris C735] Length = 348 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 43/141 (30%), Gaps = 26/141 (18%) Query: 61 YEKAVLFLKEQNFSKAYEY-----FNQCSRDFPFAGVARKSLLMSAFVQ-YS----AGKY 110 Y A + ++ + A + F A K + S + + Sbjct: 84 YRDAQVSKEQSEYEYAMKSADPAVLQAYLDTF---TDAPKVHVDSIQAHLFMLQQGDKDW 140 Query: 111 QQAA-----SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 A SL E YI +P+S + + I + + +T L + Sbjct: 141 TNALVSNSKSLLEAYIANHPDSPHKAEAEH--------KIDSIDWANVSTTNTLDAYNTY 192 Query: 166 VERYTNSPYVKGARFYVTVGR 186 ++ + N +V A+ + Sbjct: 193 LQDHPNGEHVDEAKDGIKSLN 213 >gi|260592657|ref|ZP_05858115.1| putative TPR domain protein [Prevotella veroralis F0319] gi|260535427|gb|EEX18044.1| putative TPR domain protein [Prevotella veroralis F0319] Length = 1133 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 60/174 (34%), Gaps = 32/174 (18%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA---------- 93 D Y D +Y +L++++ A Y + SR +P + Sbjct: 626 SDNYPDYEAMDDVYYHLY---LLYMRKNEPEIAETYLTKLSRQYPKSKWTTLLTDPYYKQ 682 Query: 94 --------RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 SL S + + G+Y + A+ + ++P N D ++ G+S Sbjct: 683 NLRFGVQIEDSLYASTYDAFKQGRYNEVANNAQISEKRFPMGANRDKFLFIGGLSKLNT- 741 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 L M +V++Y NS + A + A K++ G++ Sbjct: 742 -------GDANGCLTDMKEVVKKYPNSRISEMAG---MIVNGVQAGKKLRSGKF 785 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 22/54 (40%) Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 A + V NY D E ++ L Y+ + A ++ + +YP+ W Sbjct: 618 AERALRRVSDNYPDYEAMDDVYYHLYLLYMRKNEPEIAETYLTKLSRQYPKSKW 671 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV-VSLIQE 255 YYL GE A+P Q V+ + + + L + Y AL +A E +I+ Sbjct: 221 ADYYLHTGELAKAVPYLQKVIKHEMRQKQKARELYLLGQVYAALGKRQDAYEAFQRVIRT 280 Query: 256 RYP 258 P Sbjct: 281 NPP 283 >gi|119953321|ref|YP_945530.1| tetratricopeptide repeat family protein [Borrelia turicatae 91E135] gi|119862092|gb|AAX17860.1| tetratricopeptide repeat family protein [Borrelia turicatae 91E135] Length = 217 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 26/67 (38%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + + + A ++F + P K +++A Y +Y +A E + Sbjct: 103 GEAYFFQGQYKNALKHFQKYIGLEPNGARIAKVYILTADSFYKLERYNEADFAYENALRF 162 Query: 124 YPESKNV 130 P ++N+ Sbjct: 163 LPNNQNI 169 >gi|121712788|ref|XP_001274005.1| serine/threonine protein phosphatase PPT1 [Aspergillus clavatus NRRL 1] gi|119402158|gb|EAW12579.1| serine/threonine protein phosphatase PPT1 [Aspergillus clavatus NRRL 1] Length = 478 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 16/149 (10%), Positives = 46/149 (30%), Gaps = 27/149 (18%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYSAG 108 +D+ + + + + A +++ Q + P + + ++ Sbjct: 4 SDIEAATALKVQGNKAFAQHEWPAAVDFYTQAIAKYDREP-SFFSNRAQ-----AHIKLE 57 Query: 109 KYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y A + + + P Y Y+ ++ ++ + L+ +V Sbjct: 58 AYGFAIADATKALELDP-----AYVKAYWRRALANTAILN--------YRDALKDFKAVV 104 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 +R N+ A+ + + E E Sbjct: 105 KREPNNR---DAKLKLADCEKLVRRIEFE 130 >gi|89092495|ref|ZP_01165448.1| hypothetical protein MED92_14353 [Oceanospirillum sp. MED92] gi|89083007|gb|EAR62226.1| hypothetical protein MED92_14353 [Oceanospirillum sp. MED92] Length = 422 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 27/74 (36%), Gaps = 3/74 (4%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V + + +++ + + + A E F + P + ++ L A Sbjct: 22 VVTAETNEEFDPEKFFKQGMEEREAGSPYNAIESFQTILSNQP-SLH--RARLELAVAYM 78 Query: 106 SAGKYQQAASLGEE 119 +YQ+A + +E Sbjct: 79 QTLQYQEAEAQAQE 92 >gi|298387954|ref|ZP_06997503.1| TPR domain-containing protein [Bacteroides sp. 1_1_14] gi|298259361|gb|EFI02236.1| TPR domain-containing protein [Bacteroides sp. 1_1_14] Length = 584 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 65/199 (32%), Gaps = 38/199 (19%) Query: 61 YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARK-SLLMSAFVQYSAGKYQQAASLG 117 Y + + L ++ KA Q FP A++ L + KY + S Sbjct: 116 YSQGLASLYQQQNELDKAVTLLEQMVVRFP----AKQDPLFNLLDLYGRQEKYDEVISTL 171 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + +++ + + + Y QM D K Q + +V+ Y Sbjct: 172 NRLEKRMGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVQEYP------- 213 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 + + +V +G YL+ G+ A +Q VLA D A+ + Y Sbjct: 214 ----MDM------RYQVILGDVYLQNGKKQEAYDVYQKVLAAEPD---NPMAIFSMASYY 260 Query: 238 VALALMDEAREVVSLIQER 256 + ++ + + Sbjct: 261 KQTGQEELYQQQLDTLLLN 279 >gi|209527011|ref|ZP_03275527.1| protein of unknown function DUF268 [Arthrospira maxima CS-328] gi|209492522|gb|EDZ92861.1| protein of unknown function DUF268 [Arthrospira maxima CS-328] Length = 1345 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 25/75 (33%), Gaps = 17/75 (22%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-------YQQA 113 +++ L+ +A + F + +P + Y G+ ++A Sbjct: 5 FDRGNQLLQSGKLEEAVDAFQKAIAHYPHFHWS----------HYKLGEALEQLGRLEEA 54 Query: 114 ASLGEEYITQYPESK 128 + ++ + P S Sbjct: 55 KAAFQKALEINPNSP 69 >gi|254410950|ref|ZP_05024728.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196182305|gb|EDX77291.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 799 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 34/229 (14%), Positives = 71/229 (31%), Gaps = 36/229 (15%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 V E S + +D + + +F A +++ + P Sbjct: 138 VSAETSLSDSISSIENSDSEQAEVWFNRGNQQFDAGDFLGAIANYDKALQFKPDNHY--- 194 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 + M GKY++A + ++ + P+ + +Y G++ A D Sbjct: 195 AWFMRGVALADLGKYEEAIANYDKALQIQPDFHQ----AWYNRGVALA--------DLGE 242 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YL 201 + + + ++ + A + V L E I Y + Sbjct: 243 YEEAIANYDKALQIQPD---FHQAWYNRGVALADLGEYEEAIANYDKALQIQPDKHEAWY 299 Query: 202 KRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEA 246 RG + + +++ +ANY A +A A L +EA Sbjct: 300 NRGVALGNLGKYEEAIANYDKALQIQPDFHQAWFMRGVALADLGEYEEA 348 Score = 40.1 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 14/112 (12%), Positives = 40/112 (35%), Gaps = 16/112 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y + V + +A +++ + P F ++ M G+Y++A + ++ Sbjct: 299 YNRGVALGNLGKYEEAIANYDKALQIQPDF----HQAWFMRGVALADLGEYEEAIANYDK 354 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + P + Y + G++ A D + + + ++ + Sbjct: 355 ALQFKP---DFHYAWNNRGVALA--------DLGKYEEAIASFDKALQIKPD 395 >gi|154147891|ref|YP_001406275.1| TPR repeat-containing protein [Campylobacter hominis ATCC BAA-381] gi|153803900|gb|ABS50907.1| TPR repeat-containing protein [Campylobacter hominis ATCC BAA-381] Length = 272 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 39/116 (33%), Gaps = 2/116 (1%) Query: 155 TKLMLQYMSRIVERYTNSPY--VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 +K + + + Y+ Y K Y+ Q A +G Y AI Sbjct: 155 SKKETEILKEAEKLYSKKDYSGAKECYEYLVSKNYQPAKSNFMLGEISYFGKSYGEAIKY 214 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 +Q +++ + + + ++ + + A + + ++ YP A+ Sbjct: 215 YQTSISHSQTQPYTPKLLYHTAISFDKIGDTNSANKFYNALKSAYPDSKEAKSSPN 270 Score = 39.3 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 44/128 (34%), Gaps = 11/128 (8%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + + E+ ++A ++++S A E + + KS M + Y Y +A Sbjct: 155 SKKETEILKEAEKLYSKKDYSGAKECYEYLVSKN-YQP--AKSNFMLGEISYFGKSYGEA 211 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + I+ + Y +S+ ++ T ++ + + Y +S Sbjct: 212 IKYYQTSISHSQTQPYTPKLLYHTAISFDKI--------GDTNSANKFYNALKSAYPDSK 263 Query: 174 YVKGARFY 181 K + Sbjct: 264 EAKSSPNR 271 >gi|56695232|ref|YP_165580.1| TPR domain-containing protein [Ruegeria pomeroyi DSS-3] gi|56676969|gb|AAV93635.1| TPR domain protein [Ruegeria pomeroyi DSS-3] Length = 611 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 56/163 (34%), Gaps = 34/163 (20%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A + A E + ++D+P ++ + +Q Y +AA+ ++ + Sbjct: 372 RAEALRRSAKPDAAIEVLEKLAKDYPSQP---QAFVALGDLQRQQEAYDRAATAYDKALQ 428 Query: 123 Q-YPESKNVDYVYYLVGMSY------------AQMIRDVPYD---------------QRA 154 P + N+ +++Y G+ + + ++ D Q Sbjct: 429 LTDPGAPNMWFLHYARGICHERLGNWPGAEADFRAALELNPDQPQVLNYLGYSLVEKQEK 488 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 L + R V +S Y+ + +V +L + +G Sbjct: 489 LDEALDLIERAVAARPDSGYIVDSLGWVLF---RLGRYDEAVG 528 >gi|78216475|gb|ABB36656.1| p50 immunophilin [Schistosoma japonicum] Length = 424 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 51/151 (33%), Gaps = 26/151 (17%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF----AGVARK--------SLL 98 + Y + EKA FLK+ F A E + + + + +K L Sbjct: 246 PKRIGYAITLKEKANNFLKDSKFDSAIELYKRLDDELQYVVANGPTEQKELSGVTVAVQL 305 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A V K + ++ + + +++ + +G ++ + + Sbjct: 306 NLALVYLKLCKPDKCIEFCKKVLDNFSDNEK---ALFRIGQAHLLR--------KDHEEA 354 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + Y RIV + N+ A V + ++ Sbjct: 355 VVYFKRIVTKNPNN---ASAVKQVQICEEEI 382 >gi|116620862|ref|YP_823018.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116224024|gb|ABJ82733.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 388 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 58/179 (32%), Gaps = 30/179 (16%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 ++ + AG+ AA + I + S + Y YL Y++ Sbjct: 121 QAQADLGSALFDAGELAVAAEHLDRAIQIFGRSGDAAYPRYLRAKIYSER--------GE 172 Query: 155 TKLMLQYMSRIVERYTN-----SPYVKGARFYVTVGRNQLAAKEVEI------------- 196 + +S+ V + S + + + LAA + + Sbjct: 173 NEKAAADLSQAVALRPDFAEAWSDLGQTCKLRMDDA-GALAAFQRAVMLSPDDGVAQTRL 231 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 G YL +G+ A+P Q + + A+ L A + EA+EV + E Sbjct: 232 GAEYLSQGKAHEAVPHLQEATRLNPE---NQTALYSLQSALRDDGRIAEAQEVKERLVE 287 >gi|91202019|emb|CAJ75079.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 236 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 62/189 (32%), Gaps = 34/189 (17%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + VLF + +A +Y+ + P+ R + A V + G+ +A + + Sbjct: 35 QGVLFDSQGKLDEAMQYYKKALSIDPYN---RDAHCNIATVYHKKGQLNKALEEYKIVLE 91 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 YP + Y VG A R+ D + + + VE + Sbjct: 92 LYPYDPQI---LYNVG---AIQARNNNQD-----NAIAFWEKAVELKPDFTE-------- 132 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 A + I Y ++ + AI ++ VL D L AY Sbjct: 133 -------AQYALGIA--YAQKNRFDDAIKSYKKVLETQPDDPVLY---NNLGAAYTETGK 180 Query: 243 MDEAREVVS 251 +DEA + Sbjct: 181 LDEAIAALK 189 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 11/85 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGE 118 Y + + ++ F A + + + P GK +A + + Sbjct: 135 YALGIAYAQKNRFDDAIKSYKKVLETQPDDPVLYN-----NLGAAYTETGKLDEAIAALK 189 Query: 119 EYITQYP----ESKNVDYVYYLVGM 139 + I P KN+++ Y G+ Sbjct: 190 KSIQLNPKIPMSHKNLEFAYRKKGL 214 >gi|92117696|ref|YP_577425.1| tetratricopeptide TPR_2 [Nitrobacter hamburgensis X14] gi|91800590|gb|ABE62965.1| Tetratricopeptide TPR_2 [Nitrobacter hamburgensis X14] Length = 446 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 53/178 (29%), Gaps = 33/178 (18%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K T + + + ++ +T + Y A+ +N S Sbjct: 2 KLVHTAKAAFVLITTIACCSGAAAQSPAPPITAAAVVEQDY-DALFEQMYKNPSN----- 55 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 F A +++ G Y+ A E + P N+ V +G+ Sbjct: 56 --LEVSF---KFAEQAV--------KRGDYEAAIGALERMLFFNP---NLPRVKLELGVL 99 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVE--RYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 Y ++ + +L Y ++ + R Y+T +LA E + Sbjct: 100 YFKL--------GSYELARSYFQEAIKAADAPDDIRA-QVRAYLTEIDRRLARYEFSV 148 >gi|42527576|ref|NP_972674.1| TPR domain-containing protein [Treponema denticola ATCC 35405] gi|41818161|gb|AAS12585.1| TPR domain protein [Treponema denticola ATCC 35405] Length = 417 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 33/264 (12%), Positives = 73/264 (27%), Gaps = 54/264 (20%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 S +++ + E+ ++A LK + ++A F + P +L+ Sbjct: 46 SDEIFSPEDSKQVEISELSKQAYSLLKGNSITEAINVFKKILELDPTNNY---ALVGLGD 102 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY--AQMIR-------------- 146 + K+ +A ++ + +P + Y + + Y Sbjct: 103 AERKNNKFNEAIKFYKQCLEHHPSNN---YALFGLADCYKSMNQFPRAIAIWEEYLKFDD 159 Query: 147 ----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV----GRNQLAAK 192 D + + + +++E+ + Y ++ R L Sbjct: 160 KNITVLTRVADAYRKTKEFEKAEKLYQKVLEKSPKNAYALIGLGHLNYDFKKYREALVYW 219 Query: 193 E---------------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 E IG Y K + + F+ L D + + L + Y Sbjct: 220 EKVMESSGELVDIRILTSIGNCYRKMKLFDRGVYYFERALERSPDNFY---GLFGLADCY 276 Query: 238 VALALMDEAREVVSLIQERYPQGY 261 L + I E P Sbjct: 277 RGLNQQYNSIVYWKKILELDPNNK 300 >gi|326532464|dbj|BAK05161.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 413 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 16/153 (10%), Positives = 46/153 (30%), Gaps = 27/153 (17%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLL 98 +S D + + ++ + ++++ A Y+ P A +SL Sbjct: 278 KSPHTRVQDRASAEERKADLKSQGKEAFAKKDYFTAMYYYGLVMEIDPLDATLFANRSL- 336 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVG--MSYAQMIRDVPYDQRAT 155 + +A + + +P SK +Y G +S+ + + Sbjct: 337 ----CWLRMREGDRALADAQRCKMLHPGWSK----AWYREGSALSFMEDYQG-------- 380 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + S + ++ +++ Sbjct: 381 --AVDAFQEALRLDPES---SEIKKMLSEAKSK 408 >gi|325179803|emb|CCA14206.1| peptidylprolyl cistrans isomerase putative [Albugo laibachii Nc14] Length = 482 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 17/157 (10%), Positives = 49/157 (31%), Gaps = 25/157 (15%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ----CSRDFPFA 90 L+G+ + + + + ++ + K Q +++A + + + A Sbjct: 120 LLGFAEKKKESWEMSTAEKMEECTKLKAEGTELFKTQKYAEAAAKYEEGASYLDDLY-DA 178 Query: 91 GVARKSLLMSA----F-----VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 ++ + + Y +AA++ + I KN Y G++ Sbjct: 179 EEEDQAKMKEIQTICYVNASMCHLKLENYTEAAAVSSKAIK---NDKNNIKALYRRGLAR 235 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + D+ + + + S ++ A Sbjct: 236 MHL-NDLDR-------AKEDLLTAGKLDPTSRDIRRA 264 >gi|307718360|ref|YP_003873892.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192] gi|306532086|gb|ADN01620.1| TPR domain protein [Spirochaeta thermophila DSM 6192] Length = 509 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 36/102 (35%), Gaps = 11/102 (10%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 D + Y ++Y +A + A F + S P +SL+ + Sbjct: 249 DPDILPAYYYLGKIYREAKE------YHAALLSFEK-SVRHP--DYKLRSLIERGTCYLN 299 Query: 107 AGKYQQAASLGEEYITQYP--ESKNVDYVYYLVGMSYAQMIR 146 G Y+ A E + P + + Y Y + ++Y + R Sbjct: 300 MGDYESAIMELERAVKLSPEATNPEMLYARYFLSIAYEKRRR 341 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 63/216 (29%), Gaps = 39/216 (18%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV-QYSA-GKY 110 D R Y + +LK A R F + Y + + Sbjct: 108 DPRNSEAHYLLGLAYLKTGRPELALMELKMVGRIGVFTEYCPEIQYRETIAELYKSFNQP 167 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 ++A + +YPE + YY +M Y + +E Sbjct: 168 EEALKEYLLLLKRYPEMPD----YYYKCGQLFEMRNQSDR-------AFIYYRKAIELNP 216 Query: 171 NSPYVKGARFYVTVGRNQL-----AAKEVEIG-RY--------------YLKRGEYVAAI 210 Y A F + ++ A E+E RY Y + EY AA+ Sbjct: 217 --RYA-DAHFRLGALLYRMHKYPEARSELETALRYDPDILPAYYYLGKIYREAKEYHAAL 273 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 F+ + + D + ++ Y+ + + A Sbjct: 274 LSFEKSVRH-PD--YKLRSLIERGTCYLNMGDYESA 306 >gi|301059207|ref|ZP_07200145.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] gi|300446697|gb|EFK10524.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] Length = 578 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 70/211 (33%), Gaps = 43/211 (20%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y K + L+ N+ A + N+ + +L A + + ++AA E Sbjct: 188 YYYKGRINLETGNYKAAEKALNEALKR---NQTLEPALFDKATLYQITERDKEAAGAYER 244 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 ++ YP++ + R+VE Y N K A Sbjct: 245 LLSLYPDN-------------------------------IPARERLVEVYLNLDQKKDAA 273 Query: 180 FYVTVGRNQLAAKE---VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V + + E +G YL++G +I +L++ + ++ L A Sbjct: 274 HQVELIKKHSKPGEPERQFLGLIYLRQGRIDESIAELELIVRAWPK---DYKSRYYLATA 330 Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVE 267 Y ++A E + LI + R + Sbjct: 331 YEEKGDNEKAMEQLQLIDR---DSKYYRNAQ 358 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 78/288 (27%), Gaps = 85/288 (29%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEK---AVLFL 68 L + + + Q S +V VR + ++ YE A + L Sbjct: 1 MLLLVLVMVGPTGCATVDGQRSEKATNPAVETVRPKIARPDKPDATQKAYENFLLASVAL 60 Query: 69 KEQNFSKAYEYFNQCSRDFPFAGV--ARKSLL---------MSAFV-------------- 103 + F A + Q R+ P + + ++L A+ Sbjct: 61 NQGRFRDARVHLEQAIRNDPDSVYLNTKMAILLKGLKKYPEALAYAQKSVNMDPQNTRTL 120 Query: 104 ------QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 GK + A + + + Q P +K V +I + Q+ + Sbjct: 121 TLLGDLYALTGKDELAIAEYQNILKQDPGNKRV----------RLLLITILVR-QKQFEK 169 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY-----LKRGEYVAAIPR 212 L + ++++ E+ I YY L+ G Y AA Sbjct: 170 SLVQLDTLIKQDP----------------------ELIIAYYYKGRINLETGNYKAAEKA 207 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L E A+ Y EA + YP Sbjct: 208 LNEALKRNQT---LEPALFDKATLYQITERDKEAAGAYERLLSLYPDN 252 >gi|293390070|ref|ZP_06634404.1| tetratricopeptide domain protein [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950604|gb|EFE00723.1| tetratricopeptide domain protein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 396 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 75/200 (37%), Gaps = 32/200 (16%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LD+ +++++ K A F+ F +A E D P A +L + Sbjct: 103 LDNSPHYSFEQKLLAKQQLAKDFMTVGFFDRA-ENLYILMVDEP--EFAEGALQQLTVIY 159 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++++A ++ E+ P++ NV+ Y Y + ++ +P D + + Q + + Sbjct: 160 QKTKEWKKAINVAEKLAKIAPKANNVELAQY-----YCEYVQHLPADSKENRQ--QILLQ 212 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 ++ + + + +++ Y +A+ + +L Sbjct: 213 ALKVSPSCVRAS-----------------MMLADLAIQQENYKSAVGFLEEILNQSP--A 253 Query: 225 HAEEAMARLVEAYVALALMD 244 + EA+ L Y L L+D Sbjct: 254 YISEALPALKHCYQKLNLLD 273 >gi|221131863|ref|XP_002156379.1| PREDICTED: similar to Tetratricopeptide repeat protein 26 [Hydra magnipapillata] Length = 660 Score = 40.9 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 75/210 (35%), Gaps = 36/210 (17%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 FL++++++ A + + + L A+ + +G+Y++A + + + Sbjct: 30 EDFLEKRDYTGAVTLLEFTRQA---GKESDEIGLWIAYSLFHSGEYERAMKEYQAILKKK 86 Query: 125 PESKNV----DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +V Y+++GM K Q +S I + ++ Sbjct: 87 NNQPDVMCNLACCYFMLGM---------------YKEAQQALSNIKKTDLSNRLAFHLSH 131 Query: 181 YVTVGRNQLAAK---------EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM- 230 N ++ ++ + + R + AI ++ +L + + A+ Sbjct: 132 KFNDESNLMSHHSQLQDVIEDQLSLASIHYLRSHFQEAIDIYKRILLDNRE----YYALN 187 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQG 260 + Y L D ++EV+S+ + YP Sbjct: 188 VYVALCYYKLDYFDVSQEVLSVYLQHYPDS 217 >gi|320160289|ref|YP_004173513.1| secretion protein HlyD family protein [Anaerolinea thermophila UNI-1] gi|319994142|dbj|BAJ62913.1| secretion protein HlyD family protein [Anaerolinea thermophila UNI-1] Length = 465 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 53/153 (34%), Gaps = 21/153 (13%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ------NFSKAYEYFNQCSRDFPFAGVA 93 ++V+ + V+ +E+ A L + ++ +A EY P +A Sbjct: 62 SGKVQEVHGEIGDTVQDGQELARLAEDSLPQNVLLAWNDYLQAEEYLKDLQDTQP--ELA 119 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 ++ + A Q +Y++ + Y PE +NV + D+ ++ Sbjct: 120 -QAQMELAQAQ---EEYEKVE---KRYRNFNPERRNVSQA------TIDTAKADLALAEK 166 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 ++ +Y R N P A + + Sbjct: 167 NLEMAQKYFDLFKGRDANDPERAEALKMLAKAQ 199 >gi|218245992|ref|YP_002371363.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801] gi|257059043|ref|YP_003136931.1| hypothetical protein Cyan8802_1167 [Cyanothece sp. PCC 8802] gi|218166470|gb|ACK65207.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801] gi|256589209|gb|ACV00096.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802] Length = 177 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 51/145 (35%), Gaps = 24/145 (16%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVARKSLL--MSAFVQYS 106 + ++ YE L+L ++ F +A + + + P ++L+ + +S Sbjct: 49 EQGTAQDYYELGSLYLDKKLFVQAIKLLEKALKASKKVEPQN----QALIYNALGYAYFS 104 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 + A ++ I YP +Y L ++ A + + ++ + + Sbjct: 105 QEQLDVAIRHYKDAIKLYP-----EYAIALNNLANAYEKKQM------INQAVETYEQTL 153 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAA 191 + N+ A+ R +L Sbjct: 154 KYEPNNK---VAKARSEALRKRLVE 175 >gi|163754421|ref|ZP_02161543.1| BatE, TRP domain containing protein [Kordia algicida OT-1] gi|161325362|gb|EDP96689.1| BatE, TRP domain containing protein [Kordia algicida OT-1] Length = 253 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 8/77 (10%), Positives = 25/77 (32%), Gaps = 3/77 (3%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + ++E A + N+++A + + Y + + + Sbjct: 21 SQDNTALFESANTAYNDGNYAEAIAQYKSILET---GNHSAAIYYNLGNAYYKSNEIGPS 77 Query: 114 ASLGEEYITQYPESKNV 130 E+ + P+ K++ Sbjct: 78 VYYFEKALQLSPDDKDI 94 >gi|91227602|ref|ZP_01261906.1| hypothetical protein V12G01_20491 [Vibrio alginolyticus 12G01] gi|91188495|gb|EAS74788.1| hypothetical protein V12G01_20491 [Vibrio alginolyticus 12G01] Length = 250 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 45/127 (35%), Gaps = 15/127 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + + Y +S Y A +G+ Y Sbjct: 137 YQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYS--------------ANSHYWLGQLYF 182 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A+ F V+ +Y D+ +A+ +L E +A++ + + YP Sbjct: 183 AKKQDEDAVKSFAAVV-SYKDSNKRADALLKLGEIAERNNNAAQAKKYYQQVVDEYPGSA 241 Query: 262 WARYVET 268 A+ + Sbjct: 242 SAKLASS 248 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 51/134 (38%), Gaps = 10/134 (7%) Query: 50 SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 T ++ Y+ AV LK+++++ A F Q +D+P + + S + ++ Sbjct: 126 QYTPNVDEQTAYQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKK 185 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + + A ++ +K D + ++ + A +Y ++V+ Sbjct: 186 QDEDAVKSFAAVVSYKDSNKRAD--------ALLKLGEIAERNNNAA-QAKKYYQQVVDE 236 Query: 169 YTNSPYVKGARFYV 182 Y S K A + Sbjct: 237 YPGSASAKLASSKL 250 >gi|47221056|emb|CAG12750.1| unnamed protein product [Tetraodon nigroviridis] Length = 874 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 39/135 (28%), Gaps = 31/135 (22%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF----VQ-YSAGKYQQAASLGEEY 120 E+++ A +Y+++ P + +S A+ Y+ +A + + Y Sbjct: 1 FSEKDYENAIKYYSEALELNPSNAIYYSNRS---LAYLRTECYGYALADATKALEIDKNY 57 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I YY S + K L+ +V N AR Sbjct: 58 IK----------GYYRRATSNMAL--------GKFKAALKDYETVVRVRPNDK---DARM 96 Query: 181 YVTVGRNQLAAKEVE 195 + K E Sbjct: 97 KYQECNKIVKQKAFE 111 >gi|282878978|ref|ZP_06287742.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310] gi|281298977|gb|EFA91382.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310] Length = 1106 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 22/50 (44%) Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + ++ Y EH ++A L Y L A + L++ ++P+ W Sbjct: 608 LRRLVDGYPSYEHIDKAYYHLFLLYSRLGQSGVAARYIQLLKAQHPKSEW 657 >gi|114591080|ref|XP_001160806.1| PREDICTED: leprecan-like 1 isoform 5 [Pan troglodytes] gi|114591082|ref|XP_001160850.1| PREDICTED: prolyl 3-hydroxylase 2 isoform 6 [Pan troglodytes] Length = 527 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P+ ++V L + Y + + D D A+ + Sbjct: 133 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSTDP-ASIEARED 186 Query: 162 MSRIVERY 169 ++ V+R+ Sbjct: 187 LTMFVKRH 194 >gi|253568782|ref|ZP_04846192.1| TPR domain-containing protein [Bacteroides sp. 1_1_6] gi|251840801|gb|EES68882.1| TPR domain-containing protein [Bacteroides sp. 1_1_6] Length = 584 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 65/199 (32%), Gaps = 38/199 (19%) Query: 61 YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARK-SLLMSAFVQYSAGKYQQAASLG 117 Y + + L ++ KA Q FP A++ L + KY + S Sbjct: 116 YSQGLASLYQQQNELDKAVTLLEQMVVRFP----AKQDPLFNLLDLYGRQEKYDEVISTL 171 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + +++ + + + Y QM D K Q + +V+ Y Sbjct: 172 NRLEKRMGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVQEYP------- 213 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 + + +V +G YL+ G+ A +Q VLA D A+ + Y Sbjct: 214 ----MDM------RYQVILGDVYLQNGKKQEAYDVYQKVLAAEPD---NPMAIFSMASYY 260 Query: 238 VALALMDEAREVVSLIQER 256 + ++ + + Sbjct: 261 KQTGQEELYQQQLDTLLLN 279 >gi|110636602|ref|YP_676809.1| TPR repeat-containing gliding mobility protein [Cytophaga hutchinsonii ATCC 33406] gi|110279283|gb|ABG57469.1| gliding motility-related protein; TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406] Length = 794 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 67/171 (39%), Gaps = 19/171 (11%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + S + + + Q+A E + +YPESK V V Y + + Y + + Sbjct: 584 QVASIY-NHKLDEPQRAIRTYENILKRYPESKYVPEVLYNLYLIYKEQDNN--------- 633 Query: 157 LMLQYMSRIVERYTNSPYVKGAR----FYVTVGRNQLAAKEVEIGRYY--LKRGEYVAAI 210 Y +R++ + NS + K R + + N+ A E + Y K + A Sbjct: 634 KQEVYKARLLNEHPNSIFAKLIRNPNYYRDSKIANKFATVEYK--DVYALYKANRFAEAD 691 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVAL-ALMDEAREVVSLIQERYPQG 260 ++ Y D++ ++ + + + + ++ +S E++P+ Sbjct: 692 SAGTVLSNKYPDSDILDKVAYIQILCRIKIEGTGHDVQQAISNFPEKFPES 742 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 Y K E AI ++ +L Y ++++ E + L Y ++ + + +P Sbjct: 589 YNHKLDEPQRAIRTYENILKRYPESKYVPEVLYNLYLIYKE-QDNNKQEVYKARLLNEHP 647 Query: 259 QGYWAR 264 +A+ Sbjct: 648 NSIFAK 653 >gi|77458214|ref|YP_347719.1| type II and III secretion system protein [Pseudomonas fluorescens Pf0-1] gi|77382217|gb|ABA73730.1| putative general secretion pathway protein D [Pseudomonas fluorescens Pf0-1] Length = 615 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 13/119 (10%) Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYL-------VGMSYAQMIRDVPYDQRATKLML 159 G+Y+ + EE + + P +L ++ D +R Sbjct: 35 QGQYEAGLARIEEGLRENPRDTE----LHLLLNSGRAKAITALLTSGDTDRARRDFASAR 90 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 SR++ N+ + A + R+ E+ G L+RG+ A + + +L Sbjct: 91 TAYSRVLTIEPNNRRAQDALRQLDYLRSMDEKLELARGD--LRRGDIYGADRQVKQILE 147 >gi|296125876|ref|YP_003633128.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] gi|296017692|gb|ADG70929.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] Length = 1364 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 69/226 (30%), Gaps = 54/226 (23%) Query: 57 QREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 EVY K A L + +F + F + +P L S Y+ Sbjct: 1031 DDEVYPKLAQYLLDKDDFYGSRVLFEKLLAAYPNN-------LESIVGY---ADYETRLK 1080 Query: 116 LGEEYITQ-----------YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + + P +K +YVY ++G Y + ++ + Sbjct: 1081 HYDRAMELLNTAALPLYESNPFNKGKEYVYNMLGQIYYNL--------GEYGNAVRNFNE 1132 Query: 165 IV---ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY-LKRGEYVAAIPRFQLVLANY 220 + E Y ++ Y +G Y K +Y A +Q+ N Sbjct: 1133 ALAINEVYPDANY--------------------NLGNVYFYKDKDYAKAKQYYQMAYDNL 1172 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 + +++ + L Y A D A E + + ++ P Y Sbjct: 1173 APNLRSDQLLYNLSWIYYADGEYDSAFEGFNALFQKNPSNSVVSYA 1218 >gi|221055960|ref|XP_002259118.1| hypothetical protein, conserved in Plasmodium species [Plasmodium knowlesi strain H] gi|193809189|emb|CAQ39891.1| hypothetical protein, conserved in Plasmodium species [Plasmodium knowlesi strain H] Length = 472 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 54/183 (29%), Gaps = 37/183 (20%) Query: 38 WERQSSRDVYL---DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ----CSRDFPFA 90 S++ L +S ++ E+ E+N+ A YF + FP Sbjct: 98 CTHDHSKERQLYEKESKEKIKASNAFNEEGKKAFYEKNYKLACVYFRKGLIQLDYSFPDT 157 Query: 91 GVARKSL--------LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 ++ L A ++ Y + S + K YY G +Y Sbjct: 158 DQEQQEQNRLEINLHLNLAITKFHMSNYHECISECSTVLNL---DKKNAKAYYRKGQAYM 214 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + + +++E A+ + +N++A Y K Sbjct: 215 SLD--------MYSEAKKEFLKVLEINPGD---NDAKRSLLTLKNKIAN--------YTK 255 Query: 203 RGE 205 R + Sbjct: 256 REK 258 >gi|171915620|ref|ZP_02931090.1| hypothetical protein VspiD_30655 [Verrucomicrobium spinosum DSM 4136] Length = 962 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 32/228 (14%), Positives = 75/228 (32%), Gaps = 47/228 (20%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V+ + ++ + + L++ +A + F + + FP A +++ A+ + Sbjct: 430 VHQKHPQHALAPQCLFMEGICLLEQDLNREALDAFAEVPKRFP----AATAVVEDAW-YW 484 Query: 106 ------SAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 ++ A S E+Y+ +Y E + + + S + Sbjct: 485 GGMSLSLDKQHAAARSRMEDYLKRYTEKGAHAAEARFRIAFSSFGLSEHA--------RA 536 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + + ++R + + A+ + + A R L Sbjct: 537 INELGAFLKREPGTLMAEEAKLLLGDA---------------------LGAEGRIDEALR 575 Query: 219 NYS------DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 Y+ +A AEEA+ R Y DE ++ S+ +P+ Sbjct: 576 AYAEVNPKLNARFAEEAVFRTGNIYKLAERFDEMQDHFSVFVRNHPRS 623 >gi|166364038|ref|YP_001656311.1| photosystem I assembly related protein Ycf37 [Microcystis aeruginosa NIES-843] gi|166086411|dbj|BAG01119.1| photosystem I assembly related protein Ycf37 [Microcystis aeruginosa NIES-843] Length = 178 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 50/140 (35%), Gaps = 18/140 (12%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR--KSLL--MSAFVQYSAGKYQ 111 +E YE L+L ++ + +A + + + ++L+ F ++ + + Sbjct: 51 TAKEYYELGSLYLDKKLYVQALSLLQKALKISEEESIEPENQALIYNAIGFSYFAQEQLE 110 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A +E I YP+ Y + ++ + + + K L+ ++ N Sbjct: 111 LAIRNYKEAIKLYPQ--------YSIALNNLGNVYEKK---QMAKKALETYEETLKFDPN 159 Query: 172 SPYVKGARFYVTVGRNQLAA 191 + A+ R + A Sbjct: 160 N---TVAKKRAESLRKRFAE 176 >gi|197102920|ref|NP_001124594.1| tetratricopeptide repeat protein 38 [Pongo abelii] gi|75042639|sp|Q5RFF7|TTC38_PONAB RecName: Full=Tetratricopeptide repeat protein 38; Short=TPR repeat protein 38 gi|55725085|emb|CAH89410.1| hypothetical protein [Pongo abelii] gi|55725270|emb|CAH89500.1| hypothetical protein [Pongo abelii] Length = 469 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 46/148 (31%), Gaps = 29/148 (19%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYEYF 80 L+G D LD + +++ AV + NF KA E + Sbjct: 72 TGLVLIGTGSSVKLDKELDLAVKTMMEVSRTQPLTRREQLHVSAVETFAKGNFPKACELW 131 Query: 81 NQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVY 134 Q +D P M A + G +Q YP + ++ Sbjct: 132 EQILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPLSS 180 Query: 135 YLVGMSYAQMIRDVPYDQ--RATKLMLQ 160 Y+ G+ ++ YDQ + K L Sbjct: 181 YVKGIYSFGLMETNFYDQAEKLAKEALS 208 >gi|56605882|ref|NP_001008437.1| dnaJ homolog subfamily C member 3 precursor [Gallus gallus] gi|73620805|sp|Q5ZI13|DNJC3_CHICK RecName: Full=DnaJ homolog subfamily C member 3; Flags: Precursor gi|53136602|emb|CAG32630.1| hypothetical protein RCJMB04_31h14 [Gallus gallus] Length = 503 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 38/297 (12%), Positives = 86/297 (28%), Gaps = 68/297 (22%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 L + +T + +Y +A+ +++++ A ++ + A Sbjct: 130 VLKSNPSNNEEKEAQTQLTKSDELQRLYSQALSAYRQEDYEAAIPLLDEILAVCVW--DA 187 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----VYYLVG----------- 138 L A G+ +A S + ++ Y +YY +G Sbjct: 188 ELRELR-AECYIKEGEPSKAISDLKAAAKLKSDNTEAFYKISRIYYQLGDHELSLSEVRE 246 Query: 139 -----------MSYAQMIRDVPYDQRATKL---------MLQYMSRIVERYTNSP-YVKG 177 S + ++ + + + + +++ + P Y Sbjct: 247 CLKLDQDHKQCFSLYKQVKKLNKQIESAEEFIREGRYEDAISKYDSVMKTEPDVPVYATR 306 Query: 178 ARFYVTVG--RNQLAAKEVEI------------------GRYYLKRGEYVAAIPRFQLVL 217 A+ + +NQ A + + + YL Y AI ++ Sbjct: 307 AKERICHCLSKNQQATEAITVCTQVLQLEPTNVNALKDRAEAYLLEDLYEEAIKDYETAQ 366 Query: 218 ANYSDAEHAEEAMAR----LVEA-----YVALALMDEAREVVSLIQERYPQGYWARY 265 AN + + E + R L ++ Y L + AR+ + R W Sbjct: 367 ANSENDQQIREGLERAQRMLKQSQKRDYYKILGVKRNARKQEIIKAYRKLASQWHPD 423 >gi|325117705|emb|CBZ53256.1| putative TPR domain-containing protein [Neospora caninum Liverpool] Length = 780 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 22/184 (11%), Positives = 56/184 (30%), Gaps = 37/184 (20%) Query: 37 GWERQSSRDVYL---DSVTDVRYQREVYEKAVLFLKEQNFSKAY----EYFNQCSRDFPF 89 G S++ + + + ++ +E+N+ A + Q FP Sbjct: 111 GCSHDHSKERQIYEKPTGEKIDAAERFRQEGNAAFREKNYGLAAVNYRKALLQFDYTFPD 170 Query: 90 AGVARKSL--------LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 ++ + L A + Y + + P++ +Y G+++ Sbjct: 171 TDEEQERMDSVKLPCHLNLAACKLHQQDYDEVYIQCRLALEMDPKNVK---AFYRRGLAH 227 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q V + + + + NS ++ A + + R ++ Y Sbjct: 228 LQQDDFV--------KAKEDLMEALAQEPNSKEIRDA---LMLLREKIQR--------YQ 268 Query: 202 KRGE 205 +R Sbjct: 269 RRSA 272 >gi|307256760|ref|ZP_07538539.1| hypothetical protein appser10_7630 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306864808|gb|EFM96712.1| hypothetical protein appser10_7630 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 338 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LD+ D ++++ K A F+ + +A Y+ + A SL V Sbjct: 43 LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 99 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++++A ++ E+ I P++ + +Y YAQ I++ D L +S+ Sbjct: 100 QKTKEWKKAINVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 152 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +E A + +G YYL + ++ +A+ ++ +L D Sbjct: 153 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYERILQQDPD-- 193 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256 E + ++ Y +A D A + LI+ Sbjct: 194 FISEVIEKIKACY--MAENDLANYELFLIRAN 223 >gi|282901707|ref|ZP_06309623.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] gi|281193470|gb|EFA68451.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] Length = 802 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 50/136 (36%), Gaps = 26/136 (19%) Query: 49 DSVTDVRYQREVY--EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQ 104 + T+++ + V + + ++ +N+ +A F++ P F ++ + Sbjct: 665 NKATEIKPEESVAWLNRGLSLVELENYEEAISSFDKALEIQPSSFKIWDKR-----GYTL 719 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 G+ ++A + + + P DY Y YA Q+ + L + Sbjct: 720 VRLGRDEEAITNFNKALELNP-----DYGSALYHKAACYAL--------QKNVESALVNL 766 Query: 163 SRIVERYTNSPYVKGA 178 + ++ + Y + A Sbjct: 767 QQAIKHKPS--YREDA 780 Score = 38.9 bits (90), Expect = 0.71, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 43/130 (33%), Gaps = 21/130 (16%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAF 102 DV + D E+ ++A L + + A + + + P L F Sbjct: 562 DVQTVNNLDNNVDHEI-QEAEELLSQNRYEDALSIYEKITSIQPDHGEHW-----LKRGF 615 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + +Y++A + + I P Y ++ +G++ ++ + + Sbjct: 616 ILSKLKRYKEAVGVYNQVIRINPAH----YQAWFDIGITCGKLGKH--------QEAFNC 663 Query: 162 MSRIVERYTN 171 ++ E Sbjct: 664 FNKATEIKPE 673 >gi|189461341|ref|ZP_03010126.1| hypothetical protein BACCOP_01991 [Bacteroides coprocola DSM 17136] gi|189431870|gb|EDV00855.1| hypothetical protein BACCOP_01991 [Bacteroides coprocola DSM 17136] Length = 250 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 30/104 (28%), Gaps = 18/104 (17%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 SI + FL+G + +S V +A +E F+ A E + Sbjct: 4 LSIIIAFLIGLFQFASASVTK-------------AEADKDYQENKFADAIEKYEAILA-- 48 Query: 88 PFAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + + Y +A E + P ++ Sbjct: 49 --SEGESADIYYNLGNSYYKNKNIAKAVLNYERALLMNPGDADI 90 >gi|115376734|ref|ZP_01463961.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca DW4/3-1] gi|115366283|gb|EAU65291.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca DW4/3-1] Length = 1190 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 61/162 (37%), Gaps = 34/162 (20%) Query: 93 ARKSLLMSAFVQYSAGKYQQ-AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 + K+ L++ + +Y + A + + +YP + D V + +G + +D Sbjct: 141 SEKAELIA-----RSKEYGKHAVEQYTKIVQEYPSFERSDEVLFFLGNFLMEDGQD---- 191 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL-----KRGEY 206 + L R+VE++ S ++ + G YY KR E Sbjct: 192 ----RKALVAYKRLVEKFPKSKFLPDVY--------------LAFGEYYFNNSKGKRPEL 233 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 A+ ++ +++++ A+ + Y + +A++ Sbjct: 234 EKALEAYRRAAE-FTESQAYAFAIYKQGWCYFNMGEYAQAKD 274 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 8/82 (9%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 D + +Y +V F K + +A E +P + S + Sbjct: 708 VKDFPETTIADQALYNASVDFFKAKMLDRAIEVRQSLISQYPRSRFVP----DSIYANAE 763 Query: 107 A----GKYQQAASLGEEYITQY 124 A G + QAA E Y+ Y Sbjct: 764 ALEAIGDFAQAADTYELYVKGY 785 >gi|315637612|ref|ZP_07892818.1| conserved hypothetical protein [Arcobacter butzleri JV22] gi|315478066|gb|EFU68793.1| conserved hypothetical protein [Arcobacter butzleri JV22] Length = 313 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 17/135 (12%), Positives = 39/135 (28%), Gaps = 27/135 (20%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQC--------SRDFPFAGVARKSLLMSAFVQYSAGKY 110 ++ +A + ++ A + + +F + Y KY Sbjct: 198 KLMNEAKKDYDAKAYNTAIPKYEKLIEVNYKPAENNFYLGEM-----------WYKRKKY 246 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A S ++ D Y+ + I + + + ++E Y Sbjct: 247 DTAISHFKKSAMLN------DKAAYMPTLLLHSAISFEN--VKDKENAKSFYGTLIELYP 298 Query: 171 NSPYVKGARFYVTVG 185 NS K A+ ++ Sbjct: 299 NSSEAKEAKTKLSKL 313 >gi|288800162|ref|ZP_06405621.1| putative BatD protein [Prevotella sp. oral taxon 299 str. F0039] gi|288333410|gb|EFC71889.1| putative BatD protein [Prevotella sp. oral taxon 299 str. F0039] Length = 250 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 23/71 (32%), Gaps = 8/71 (11%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEE 119 + A ++ +++A + + + + V + L A Y A E Sbjct: 26 DSADTNYQKGIYTQAIKAYQELLK------VGESATLHYNLANAYYKTNNLALAVLNYER 79 Query: 120 YITQYPESKNV 130 + P K + Sbjct: 80 ALHLSPNDKGI 90 >gi|182626237|ref|ZP_02953995.1| tetratricopeptide repeat protein [Clostridium perfringens D str. JGS1721] gi|177908501|gb|EDT71034.1| tetratricopeptide repeat protein [Clostridium perfringens D str. JGS1721] Length = 475 Score = 40.9 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 14/142 (9%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAF---- 102 +++ +++Y K KE+ + A + F + + F+ S L + Sbjct: 340 ENLMKTDGVKDLYLKGSDLFKEKKYEDALKDFEKA---YAFSS---DSYLRPHLIYFMGT 393 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + K +A +EY+ Y + + Y + + + +Y Sbjct: 394 SYENLDKNTEAIKYFQEYLKDYKAKPDAEDFMY-TPQCLYNLAILYNK-EGNSAESKKYA 451 Query: 163 SRIVERYTNSPYVKGARFYVTV 184 I Y N+ + + Sbjct: 452 QEIENDYPNTMFYNDVTKKIIY 473 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 6/73 (8%) Query: 200 YLKRGEYVAAIPRFQLVLANY---SDAE---HAEEAMARLVEAYVALALMDEAREVVSLI 253 Y + AI FQ L +Y DAE + + + L Y E+++ I Sbjct: 395 YENLDKNTEAIKYFQEYLKDYKAKPDAEDFMYTPQCLYNLAILYNKEGNSAESKKYAQEI 454 Query: 254 QERYPQGYWARYV 266 + YP + V Sbjct: 455 ENDYPNTMFYNDV 467 >gi|320034523|gb|EFW16467.1| serine/threonine protein phosphatase PPT1 [Coccidioides posadasii str. Silveira] Length = 478 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 66/208 (31%), Gaps = 55/208 (26%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 ++KA E ++ P + ++ Y A + + I P Y Sbjct: 32 YTKAIEKYD----RDP-SFWCNRAQ-----ANIKLEAYGYAIADATKAIELDPS-----Y 76 Query: 133 --VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 Y+ ++ ++ + L+ +V + N A+ + Sbjct: 77 VKAYWRRAVANTAILNS--------REALKDFKTVVRKAPNDR---DAKLKLAECEKL-- 123 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR----LVEAYVALALMDE- 245 ++R E+ AI + A E + + E+Y + L DE Sbjct: 124 ----------VRRIEFEKAIEVAE--------PPSAFEGLDIEAIKVEESYDGVHLGDEM 165 Query: 246 AREVVSLIQERYPQGYW--ARYVETLVK 271 +E + + ER+ G +Y +VK Sbjct: 166 TQEFIDDMIERFKNGKKIHKKYAYKIVK 193 >gi|298368678|ref|ZP_06979996.1| tetratricopeptide repeat protein [Neisseria sp. oral taxon 014 str. F0314] gi|298282681|gb|EFI24168.1| tetratricopeptide repeat protein [Neisseria sp. oral taxon 014 str. F0314] Length = 610 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 45/141 (31%), Gaps = 27/141 (19%) Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + +A + Y+ P S + + Y +I T + + Sbjct: 461 QPDKAIADLRRYLKLNPNSAAG-----MNALGYTMLISRQSGI-SDTDEAFKLIQTAYNL 514 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 SP + + + Y ++G+ A+P Q Y D+E A Sbjct: 515 DPESPAINDS---MGWA--------------YYRKGDAQTALPYLQYAFGRYPDSEVA-- 555 Query: 229 AMARLVEAYVALALMDEAREV 249 A L E L +EA++V Sbjct: 556 --AHLGEVLWQLGQKEEAKKV 574 >gi|291060017|gb|ADD72752.1| TPR domain-containing protein [Treponema pallidum subsp. pallidum str. Chicago] Length = 658 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 38/217 (17%) Query: 59 EVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++YE ++++ A E++ ++ + + A Y+ G+Y QA Sbjct: 23 QLYEAGRKAHVQEDWHAAIEFYQEALKKNASYN----LAYRGLAECFYALGEYDQALHHV 78 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + + L + ++ DQ I+ RY N Sbjct: 79 RKAQKL------MAQDLSLEKLCAFSLVGQGELDQ-----ARSLFEEILARYPN-----D 122 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR--------FQLVLANYSDAEHAEEA 229 LA EV GR R Y AA+ R L L +Y +A H A Sbjct: 123 VDARFG-----LAEIEVSKGRLSSARLLYQAALERQAENRKALLSLALISY-EAGHYPRA 176 Query: 230 MARLVEAYVALALMDEA---REVVSLIQERYPQGYWA 263 + + A + ++ ++ Y Sbjct: 177 LTYVERALQYHGDNAQVHFFAAYLATLRAHYEDAERY 213 >gi|118400972|ref|XP_001032807.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89287152|gb|EAR85144.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 925 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 32/104 (30%), Gaps = 10/104 (9%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKS 96 + + ++ + K+ +F KA + + Q P F K+ Sbjct: 476 NSNQEQQQQKYKGDTKKQAENLHSQGFEMRKKGDFQKAIQLYTQAIELNPRHF-----KA 530 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 F Y A + + + P + Y YY G+S Sbjct: 531 FFNRGFAYDKLEMYDLAIADYSQALEIDPNN---AYAYYNRGIS 571 >gi|332706139|ref|ZP_08426210.1| Tfp pilus assembly protein PilF [Lyngbya majuscula 3L] gi|332355117|gb|EGJ34586.1| Tfp pilus assembly protein PilF [Lyngbya majuscula 3L] Length = 767 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 77/234 (32%), Gaps = 38/234 (16%) Query: 45 DVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + + D + + +Y L E + +A E + Q + VA SL A + Sbjct: 407 ENHPDVASSLNNLALLYWSMGRYDLAEPLYKQALELYKQLLGHH-YPDVAT-SLNNLALL 464 Query: 104 QYSAGKYQQAASLGEEYITQY-----PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 YS G+Y QA L ++ + Y + +V + + Y M R + + Sbjct: 465 YYSMGRYDQAEPLYQKVLELYKQLLGQDHPDVARSLNNLALLYWSMGR-YDLAEPLIQQA 523 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 L+ +++ + P V + + + Y G Y A P Q L Sbjct: 524 LELFKQLLGHH--HPLVAISLNNLGLL--------------YKSMGRYDQAEPLIQQALE 567 Query: 219 NY-----SDAEHAEEAMARLVEAYVALALMDEARE--------VVSLIQERYPQ 259 D H ++ L Y ++ D+A L+ +P Sbjct: 568 ITKQGLGQDHPHVATSLNNLAALYDSMGRYDQAEPLLQQALELYKQLLGHHHPD 621 >gi|255068170|ref|ZP_05320025.1| putative periplasmic protein [Neisseria sicca ATCC 29256] gi|255047597|gb|EET43061.1| putative periplasmic protein [Neisseria sicca ATCC 29256] Length = 246 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 16/131 (12%), Positives = 47/131 (35%), Gaps = 11/131 (8%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 ++ + + + +Y +A+ + + N++ A + AR+++ + Q G Sbjct: 119 EADSANQNETHLYNQALKYYQRNNYAAAAAVLKGADGGN-GSESARRNMYLLLQSQQHMG 177 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVE 167 + +G + ++ S + +G + +D+ ++++ Sbjct: 178 NCESVIEIGGRFANRFRNSPQAPDALFSIGQCQYKLQQKDIAR---------NTWRKLIQ 228 Query: 168 RYTNSPYVKGA 178 Y S K A Sbjct: 229 SYPGSAAAKRA 239 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 7/57 (12%) Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 RF+ ++ A +A+ + + L D AR + + YP A+ Sbjct: 190 ANRFR-------NSPQAPDALFSIGQCQYKLQQKDIARNTWRKLIQSYPGSAAAKRA 239 >gi|18310039|ref|NP_561973.1| tetratricopeptide repeat protein [Clostridium perfringens str. 13] gi|110800967|ref|YP_695759.1| TPR repeat-containing protein [Clostridium perfringens ATCC 13124] gi|18144718|dbj|BAB80763.1| conserved hypothetical protein [Clostridium perfringens str. 13] gi|110675614|gb|ABG84601.1| tetratricopeptide repeat protein [Clostridium perfringens ATCC 13124] Length = 473 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 14/142 (9%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAF---- 102 +++ +++Y K KE+ + A + F + + F+ S L + Sbjct: 338 ENLMKTDGVKDLYLKGSDLFKEKKYEDALKDFEKA---YAFSS---DSYLRPHLIYFMGT 391 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + K +A +EY+ Y + + Y + + + +Y Sbjct: 392 SYENLDKNTEAIKYFQEYLKDYKAKPDAEDFMY-TPQCLYNLAILYNK-EGNSAESKKYA 449 Query: 163 SRIVERYTNSPYVKGARFYVTV 184 I Y N+ + + Sbjct: 450 QEIENDYPNTMFYNDVTKKIIY 471 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 6/73 (8%) Query: 200 YLKRGEYVAAIPRFQLVLANY---SDAE---HAEEAMARLVEAYVALALMDEAREVVSLI 253 Y + AI FQ L +Y DAE + + + L Y E+++ I Sbjct: 393 YENLDKNTEAIKYFQEYLKDYKAKPDAEDFMYTPQCLYNLAILYNKEGNSAESKKYAQEI 452 Query: 254 QERYPQGYWARYV 266 + YP + V Sbjct: 453 ENDYPNTMFYNDV 465 >gi|117924934|ref|YP_865551.1| hypothetical protein Mmc1_1636 [Magnetococcus sp. MC-1] gi|117608690|gb|ABK44145.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1] Length = 968 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 29/225 (12%), Positives = 65/225 (28%), Gaps = 39/225 (17%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 ++ +A +L++ +A + P + A + +AG+ QA Sbjct: 2 ESPAAQL-SQAQAYLQQGQLQQAINSYQNLLAQHPESVAAWQG---IGSALLAAGQPLQA 57 Query: 114 ASLGEEYITQYPES-KNVDYVYYLVGM-SYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 E + P+ ++ + + + Q Q + +Q R + N Sbjct: 58 VDFFERALALDPQHYPSI------LALGTLYQQ-------QGRLERAVQLFLRGAQLQPN 104 Query: 172 -----------------SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 + + A + + +G + GE A+ +Q Sbjct: 105 QPLVHFNLGVVLAAQGRTEQAQSAYRKALALNENIPEAWLNLGNLLSRTGELQQALVCYQ 164 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 L +A L L EA ++ + ++ P Sbjct: 165 QAL---QRRPSFTQAGFGLANTLTTLKRHTEALTILEPLCQQNPD 206 >gi|332298495|ref|YP_004440417.1| hypothetical protein Trebr_1866 [Treponema brennaborense DSM 12168] gi|332181598|gb|AEE17286.1| hypothetical protein Trebr_1866 [Treponema brennaborense DSM 12168] Length = 158 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 39/109 (35%), Gaps = 9/109 (8%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + +F +T+F A + G ++ + E+ + A N A Sbjct: 2 KQTRFFITVFCLCAAAVMGGCYS------VPKTIPEDLSAEELVQLAQSSFDAGNIKAAE 55 Query: 78 EYFNQCSRDFPFAGVA--RKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 Y+ + + + ++ A ++ GK+++A + ++ Y Sbjct: 56 VYYETIIKRY-GNDINLLVEAEFEIAHLKVKQGKWEEAVPMLNRILSYY 103 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 18/115 (15%) Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 + +D K Y I++RY N N L E EI +K+ Sbjct: 40 QLAQSSFDAGNIKAAEVYYETIIKRYGND-------------INLLVEAEFEIAHLKVKQ 86 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 G++ A+P +L+ Y E L AY L L+D A+ ++++ P Sbjct: 87 GKWEEAVPMLNRILSYYESDES-----GYLSAAYKKLVLIDLAKAPEHMLEKAAP 136 >gi|320104835|ref|YP_004180426.1| hypothetical protein Isop_3315 [Isosphaera pallida ATCC 43644] gi|319752117|gb|ADV63877.1| hypothetical protein Isop_3315 [Isosphaera pallida ATCC 43644] Length = 986 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 78/254 (30%), Gaps = 52/254 (20%) Query: 60 VYE---KAVLFLKEQNFSKAYEYFNQC-SRDFP-FAGVARKSLLMSAFVQYSAGKYQQAA 114 +Y + + + +A +NQ P + RK G+Y AA Sbjct: 295 LYAKMWQGKCYEESGRLGEAMGLYNQLLENRDPRLGDLNRKVGYFRIVALGKRGEYALAA 354 Query: 115 SLGEEYITQYPESKNVDYVYYLVGM-----------SYAQMIRDV----PYDQRATKLML 159 ++ +P Y + G+ + + +D D AT+++ Sbjct: 355 DEANRWLLSHP-----AYAMTVEGLGVQLQKAKNMIAQMEAQKDTLARTERD-AATRVVR 408 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-Y----------LKRGEYVA 208 + +V Y SP+ A + + A + E+ + Y ++ G + Sbjct: 409 DTLRNVVRVY--SPHKAEALVLLQKYDPKSALRAEEVAKMKYDEASSAAEAAIQAGNFPE 466 Query: 209 AIP-------------RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 AI R + + A A L AY A E+ + + Sbjct: 467 AINLLKHAINQAFVEGRSNTLEERSKTLDQANRARYLLSYAYYANGDFYESATLAEFLAR 526 Query: 256 RYPQGYWARYVETL 269 RYP+ A + Sbjct: 527 RYPENGLAAKATEI 540 >gi|303318773|ref|XP_003069386.1| Serine/threonine protein phosphatase 5 , putative [Coccidioides posadasii C735 delta SOWgp] gi|240109072|gb|EER27241.1| Serine/threonine protein phosphatase 5 , putative [Coccidioides posadasii C735 delta SOWgp] Length = 478 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 66/208 (31%), Gaps = 55/208 (26%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 ++KA E ++ P + ++ Y A + + I P Y Sbjct: 32 YTKAIEKYD----RDP-SFWCNRAQ-----ANIKLEAYGYAIADATKAIELDPS-----Y 76 Query: 133 --VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 Y+ ++ ++ + L+ +V + N A+ + Sbjct: 77 VKAYWRRAVANTAILNS--------REALKDFKTVVRKAPNDR---DAKLKLAECEKL-- 123 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR----LVEAYVALALMDE- 245 ++R E+ AI + A E + + E+Y + L DE Sbjct: 124 ----------VRRIEFEKAIEVAE--------PPSAFEGLDIEAIKVEESYDGVHLGDEM 165 Query: 246 AREVVSLIQERYPQGYW--ARYVETLVK 271 +E + + ER+ G +Y +VK Sbjct: 166 TQEFIDDMIERFKNGKKIHKKYAYKIVK 193 >gi|237739094|ref|ZP_04569575.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] gi|229423694|gb|EEO38741.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] Length = 446 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 19/43 (44%) Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 E + +Y L E + + L+++ +P WA+ E L Sbjct: 399 PEIYYNIASSYAKLGNRVEVTKYIRLLKQEFPNSSWAKKSEAL 441 >gi|190344737|gb|EDK36477.2| hypothetical protein PGUG_00575 [Meyerozyma guilliermondii ATCC 6260] Length = 529 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 44/159 (27%), Gaps = 33/159 (20%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQ 111 V ++ ++ K F +A E + + P + ++ + Y Sbjct: 3 VAEAVKLKDEGNEHFKAHRFDEAIESYTKAIEVDPKNAVFYSNRAQV-----HIKLENYG 57 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A +E + P YY G++ +++ K I++ N Sbjct: 58 LAIIDCDEALKVDPSFTK---AYYRKGVAQMAILK--------YKEAQANFKTILKTLPN 106 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 N YLK+ + AI Sbjct: 107 DKLTLENYK---QCVN------------YLKKQAFEKAI 130 >gi|154252475|ref|YP_001413299.1| TPR repeat-containing protein [Parvibaculum lavamentivorans DS-1] gi|154156425|gb|ABS63642.1| TPR repeat-containing protein [Parvibaculum lavamentivorans DS-1] Length = 205 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 7/70 (10%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117 + ++ + L EQ++ +A+ YF++ P FA +++ + Y Y A Sbjct: 88 LMQRGLDALHEQDYDRAHFYFDEVVVLSPGFAEGWNKRATI-----HYIREDYSSALRDI 142 Query: 118 EEYITQYPES 127 E+ + P Sbjct: 143 EQTLRLEPRH 152 >gi|300865047|ref|ZP_07109874.1| putative Calcium/calmodulin-dependent protein kinase [Oscillatoria sp. PCC 6506] gi|300336984|emb|CBN55024.1| putative Calcium/calmodulin-dependent protein kinase [Oscillatoria sp. PCC 6506] Length = 1081 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 13/129 (10%), Positives = 37/129 (28%), Gaps = 26/129 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ ++ Q + A F++ + P + + + +Y +A + ++ Sbjct: 968 DQGKALMQLQKYEDAIAAFDKALKINPNDYPSWGSRGI-----ALTKLQRYDEALAAFDK 1022 Query: 120 YITQYPESK----NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 I N + G S + + ++ +E + Sbjct: 1023 AIAINSNDPLAWANRAWALEQWGRS---------------EDAIAAYNKAIEIKPDFQPA 1067 Query: 176 KGARFYVTV 184 AR + Sbjct: 1068 IEARKMLLE 1076 >gi|189485718|ref|YP_001956659.1| hypothetical protein TGRD_715 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287677|dbj|BAG14198.1| hypothetical protein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 214 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 64/177 (36%), Gaps = 25/177 (14%) Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 R F A + L +A+ + G + +L +E I ++P+ + Y +A Sbjct: 46 ILRLHAF-EEASSAKLAAAYASFMHGDKKSGTALIDEMIAKFPK-TSAAY--------HA 95 Query: 143 QMIR-DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 ++I+ D + L+ ++ IV + A + Y Sbjct: 96 RLIKADFLTEILEYDEALKILTEIVNNGKSDAIKSLAHARIIYI--------------YD 141 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 + +Y+ A + +A Y D + L E Y+ DEA EV + + +P Sbjct: 142 SKKDYLNAALVSKEFIAKYPDHFLTRDIYLNLAEYYILSGSKDEAAEVFNEVLVNFP 198 Score = 35.5 bits (81), Expect = 8.6, Method: Composition-based stats. Identities = 13/117 (11%), Positives = 42/117 (35%), Gaps = 14/117 (11%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES---KN 129 + +A + + + + + ++ S Y AA + +E+I +YP+ ++ Sbjct: 109 YDEALKILTEIVNNGKSDAIKSLAHARIIYIYDSKKDYLNAALVSKEFIAKYPDHFLTRD 168 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + YL ++ ++ + + ++ + + + AR + Sbjct: 169 I----YL-NLAEYYILSGSK------DEAAEVFNEVLVNFPATRAAESARNRFNQIK 214 >gi|118581067|ref|YP_902317.1| hypothetical protein Ppro_2656 [Pelobacter propionicus DSM 2379] gi|118503777|gb|ABL00260.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM 2379] Length = 568 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 74/245 (30%), Gaps = 44/245 (17%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L ++ C G S+ + + +Y ++ L E ++ A + Sbjct: 8 LFCATMLSSCATFGEYAPSTPSLSSPAYDAYSRALYLYSRSRLASLEGEYALALNCLREA 67 Query: 84 SRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 P + + + G+ Q+A I Q P + YV + G+ Sbjct: 68 IEQDPSSAFLYSAMAENKL-----KIGQVQEALENINRAIKQDPSFRE-PYV--MAGVLM 119 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-------- 193 A +D + Y+ ++ + + A ++ V ++ E Sbjct: 120 ASAGKDT--------EAVGYLRTAIQLDPS---KEDAYLHLAVSLTRMFEYEEAVTTLKS 168 Query: 194 ------------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 +GR Y + Y A+ F+ + + A + +Y AL Sbjct: 169 LVKQNPESVLGYYYLGRSYSQMKLYRDAVGYFKKSIELRPEFSQ---AAIDMAASYEALG 225 Query: 242 LMDEA 246 +A Sbjct: 226 DYTKA 230 >gi|325111043|ref|YP_004272111.1| hypothetical protein Plabr_4518 [Planctomyces brasiliensis DSM 5305] gi|324971311|gb|ADY62089.1| hypothetical protein Plabr_4518 [Planctomyces brasiliensis DSM 5305] Length = 1175 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 40/131 (30%), Gaps = 30/131 (22%) Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-IRDV 148 A ++ L +A AGKY QA + E+++ +P SK +G + ++ + Sbjct: 216 GRDAAQAQLKAARADREAGKYGQAFTRYEQFLDDFPYSKYAHEAIRELGFTRIELALTGA 275 Query: 149 PYDQRATKLMLQYM-------SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 D ++ + Y + LA I + Sbjct: 276 ASDLTEATKAIEEFVDQFRQDDDFRDTYPD-----------------LARYASRIAQ--- 315 Query: 202 KRGEYVAAIPR 212 Y A R Sbjct: 316 --EAYSEASRR 324 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 26/184 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS------AGKYQQAAS 115 + A + + +A+ + Q DFP++ A +++ F + A +A Sbjct: 225 KAARADREAGKYGQAFTRYEQFLDDFPYSKYAHEAIRELGFTRIELALTGAASDLTEATK 284 Query: 116 LGEEYITQYPESKNV-----DYVYY--LVGM-SYAQMIRDVPYD-QRATKLMLQYMSRIV 166 EE++ Q+ + + D Y + +Y++ R D L R Sbjct: 285 AIEEFVDQFRQDDDFRDTYPDLARYASRIAQEAYSEASRRHDPDYLTVGDTALSLFERFN 344 Query: 167 ERYTNSPYVKGARFYVTVGRNQL--------AAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + P R L A E++ L+ E A + F++ +A Sbjct: 345 SSEPDDPRRLELNQAAQSARADLLEFDVRKTALAEMDQS---LQAKEVSATLETFRVAIA 401 Query: 219 NYSD 222 Y + Sbjct: 402 RYPN 405 >gi|302338384|ref|YP_003803590.1| hypothetical protein Spirs_1870 [Spirochaeta smaragdinae DSM 11293] gi|301635569|gb|ADK80996.1| hypothetical protein Spirs_1870 [Spirochaeta smaragdinae DSM 11293] Length = 468 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 5/59 (8%) Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 D YY +G Y + +R + + ++Y +I E Y S Y A R Sbjct: 411 DEFYYRIGRLYEETLR-----PQNPEQAVEYYRKIREAYPWSRYWNDAVKRERYLRRHF 464 >gi|229590955|ref|YP_002873074.1| putative transmembrane protein [Pseudomonas fluorescens SBW25] gi|229362821|emb|CAY49731.1| putative transmembrane protein [Pseudomonas fluorescens SBW25] Length = 579 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 25/73 (34%), Gaps = 15/73 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVAR----KSLLMSAFVQY-------S 106 ++ LK++ ++A E+F + A + A+ Y Sbjct: 358 QQGQYLLKKKRPAEAAEHFEDPQWQGVALYEAGNYAEAIKRFAEGNDAYSHYNRGNALAK 417 Query: 107 AGKYQQAASLGEE 119 +G+ + A E+ Sbjct: 418 SGELEAAIDAYEQ 430 >gi|71907189|ref|YP_284776.1| hypothetical protein Daro_1557 [Dechloromonas aromatica RCB] gi|71846810|gb|AAZ46306.1| hypothetical protein Daro_1557 [Dechloromonas aromatica RCB] Length = 429 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 32/95 (33%), Gaps = 16/95 (16%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + +A+ L Q + D +++++ + ++ + E Sbjct: 17 LSVMLALAGLSSATAQEAVDT-----------EKLFKEGIFLREQGQVFSSIEALETVLS 65 Query: 86 DFPFAGVA-RKSLLMSAFVQYSAGKYQQAASLGEE 119 + P A ++ L A Y A Y QA ++ Sbjct: 66 NNP----ALNRARLELAVAYYRALNYDQANQQAQK 96 >gi|71422459|ref|XP_812141.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70876885|gb|EAN90290.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 703 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 25/189 (13%), Positives = 53/189 (28%), Gaps = 41/189 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + + K+ ++ +A + ++ R P K+L F Y A E + Sbjct: 270 QRGLAYRKKGDYLRAIDEYSAALRLDPKNF---KALFNRGFCNDKVEDYNAAIRDYEAAM 326 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P Y Y +Y + K + + + N+ Sbjct: 327 KLEPG-----YAY-----TYYNLGISYDRWGGHYKEAIAMFDKAIALDGNN--------- 367 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAY 237 +Y RG + +++ + +Y+ A +A Y Sbjct: 368 ---------------ADFYHNRGFSQRKLGKYREAVKDYTMALSLDPQHFKAYYNRAFCY 412 Query: 238 VALALMDEA 246 L A Sbjct: 413 DKLGEGANA 421 >gi|238897748|ref|YP_002923427.1| putative peptidase, M24 family [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465505|gb|ACQ67279.1| putative peptidase, M24 family [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 487 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 31/98 (31%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV--------------ARKS---------- 96 Y +A+L+ + + + KA + S +P A ++ Sbjct: 313 YGQAILWYQNKKYDKARQILQTLSVTYPDNIWFLDLMTDIDLSQNKAAQAITRLKKARVA 372 Query: 97 -------LLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 L A AG+ QA SL Y ++P Sbjct: 373 KQHQLIWQLNLANAYIKAGESAQAVSLLRRYTFEHPND 410 >gi|145477175|ref|XP_001424610.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124391675|emb|CAK57212.1| unnamed protein product [Paramecium tetraurelia] Length = 644 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 7/78 (8%) Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 +K+Q + +A Y N + P + ++L + A+ Y + A + E+ + YP Sbjct: 18 TLIKDQKYKEAINYLNYELQFCPKS----RALSLLAYCHYMNQDFTSAVGIYEQLVKYYP 73 Query: 126 ESKNVDYVYYLVGMSYAQ 143 + DY YL SY + Sbjct: 74 --EIDDYKIYL-AQSYYK 88 >gi|115716503|ref|XP_001201557.1| PREDICTED: similar to Transmembrane and tetratricopeptide repeat containing 3 [Strongylocentrotus purpuratus] gi|115772610|ref|XP_788963.2| PREDICTED: similar to Transmembrane and tetratricopeptide repeat containing 3 [Strongylocentrotus purpuratus] Length = 1258 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 42/100 (42%), Gaps = 4/100 (4%) Query: 55 RYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 ++Y A++F+ +++ S A Y+ + P + ++L +A + + + +A Sbjct: 1001 PPSVQLYSTLALIFMDDEDTSAALHYYQKALEIRP-SDY--QALFNTAKIHFEEERPLRA 1057 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 + E + +P + L+G ++D Q+ Sbjct: 1058 KAYLETLLKHHPNHTEIVRSMLLLGEILLNSLQDEVQSQQ 1097 >gi|157128485|ref|XP_001661450.1| Anaphase Promoting Complex, putative [Aedes aegypti] gi|108872562|gb|EAT36787.1| Anaphase Promoting Complex, putative [Aedes aegypti] Length = 577 Score = 40.9 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 38/103 (36%), Gaps = 3/103 (2%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE--KAVLFLKEQNFSKAYEYFNQ 82 F +I +G + L++ + + KA ++ + +S+A + F Sbjct: 163 LAFEAIEGLLSLGTNGIEVNTLVLNATLAPQCNDWLSNWIKAHAHMQGRKYSEAIQTFRS 222 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 + + + L++ Y G+Y+ A + + YP Sbjct: 223 IEMNTSLSNY-HQLLVLVGECYYHNGEYENAYTYLKRAHNLYP 264 >gi|149019966|gb|EDL78114.1| leprecan-like 1 [Rattus norvegicus] Length = 540 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P+ ++V L + + + + D D A+ + Sbjct: 146 FAYYRVGEYVKALECAKAYLMFHPDDQDV-----LDNVDFYESLLDDSTDP-ASIEARED 199 Query: 162 MSRIVERY 169 ++ V+R+ Sbjct: 200 LTAFVKRH 207 >gi|145498158|ref|XP_001435067.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124402196|emb|CAK67670.1| unnamed protein product [Paramecium tetraurelia] Length = 596 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 7/78 (8%) Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 +K+Q + A Y N + P + ++L + A+ Y + QA ++ E+ + YP Sbjct: 18 TLIKDQKYKDAINYLNYELQFCPKS----RALSLLAYCHYMNQDFSQAVAIYEQLVKYYP 73 Query: 126 ESKNVDYVYYLVGMSYAQ 143 + DY YL +Y + Sbjct: 74 --EIDDYKIYL-AQAYYK 88 >gi|91216717|ref|ZP_01253682.1| aerotolerance-related exported protein [Psychroflexus torquis ATCC 700755] gi|91185186|gb|EAS71564.1| aerotolerance-related exported protein [Psychroflexus torquis ATCC 700755] Length = 255 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 3/81 (3%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S T + +EKA + F KA + ++ + V+ + + Sbjct: 19 SYTGFSQSEDTFEKANDAFADDQFPKAVQLYSSLLDE---GLVSTELYFNLGNAYFKQND 75 Query: 110 YQQAASLGEEYITQYPESKNV 130 A E+ + P + V Sbjct: 76 LANAIFHYEKALQLNPADQEV 96 >gi|309357426|emb|CAP35734.2| CBR-HIP-1 protein [Caenorhabditis briggsae AF16] Length = 238 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 38/99 (38%), Gaps = 13/99 (13%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 AV +G ++ D ++ ++ R KA L +F A +F P + Sbjct: 95 AVALPMGDSNKAPSDEDVEKASEERG------KAQEALGNGDFDAALTHFTAAIEANPGS 148 Query: 91 G--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 A+++ ++ + A + ++ I+ P+S Sbjct: 149 AMLHAKRASVLL-----KLKRPIAAIADCDKAISINPDS 182 >gi|258593613|emb|CBE69954.1| protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 205 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 44/143 (30%), Gaps = 31/143 (21%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y + A ++ + P + +Y + MSY + L +Q Sbjct: 68 YYGRCMFHAAVDAAKKVLALDPTHP---WAHYRMAMSYFHL--------GKLDLAIQSFG 116 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 +++ + + I Y ++ + AI F V++ +A Sbjct: 117 KVLHADPTH---------------IMVHYHLGII--YERKRMWHDAIREFSQVVSENPEA 159 Query: 224 EHAEEAMARLVEAYVALALMDEA 246 + L AY L + D A Sbjct: 160 ASSH---FHLGLAYKRLEMSDLA 179 >gi|283787827|ref|YP_003367692.1| cellulose synthase operon protein C (TPR-repeat-containing protein) [Citrobacter rodentium ICC168] gi|282951281|emb|CBG90976.1| cellulose synthase operon protein C (TPR-repeat-containing protein) [Citrobacter rodentium ICC168] Length = 1232 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 76/210 (36%), Gaps = 24/210 (11%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 +S+ +D + + ++A + N+++A E + P + Sbjct: 512 SASQRRSIDDIERGLENDRLAQQAETLESQGNWAQAAELHRRRLALDPGSVW---ITYRL 568 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVPYD 151 A + AG+ QA + Q P Y Y YL G +++ + ++ Sbjct: 569 ARDLWQAGQRSQADAQMSALARQKPNDPEQVYAYGLYLSGAERDRAALAHLNALPRSQWN 628 Query: 152 QRATKLMLQY-MSRIVE---RYTNSPYVKGARFYVTVGRNQLA--AKEVEIGRYYLKRGE 205 +L + ++++E R +S A + R Q A ++ + + +R + Sbjct: 629 ANIQELAERLQSNQVLETANRLRDSGKEAEAEA---LLRQQPASTRLDLTLADWAQQRRD 685 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 Y A + VLA D +A+ L E Sbjct: 686 YATARGDYNRVLAREPD---NVDALLGLTE 712 >gi|147905191|ref|NP_001083459.1| hypothetical protein LOC398938 [Xenopus laevis] gi|38014437|gb|AAH60468.1| MGC68614 protein [Xenopus laevis] Length = 668 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 13/115 (11%), Positives = 37/115 (32%), Gaps = 21/115 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYS---AGKYQQAASL 116 +KA +Q +S+A E +++ + P + ++L A G + A Sbjct: 357 QKANDAFAQQQWSQAIELYSEAVQRAPHS-----AMLYGNRAAAYMKRKWDGDHYDALRD 411 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + + P ++ + ++ L+ + ++ + Sbjct: 412 CLQALALNPAHLK---AHFRLARCLFELH--------YVSEALECLEEFKVKFPD 455 >gi|71043726|ref|NP_001020798.1| prolyl 3-hydroxylase 2 precursor [Rattus norvegicus] gi|109892811|sp|Q4KLM6|P3H2_RAT RecName: Full=Prolyl 3-hydroxylase 2; AltName: Full=Leprecan-like protein 1; Flags: Precursor gi|68533818|gb|AAH99107.1| Leprecan-like 1 [Rattus norvegicus] Length = 703 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P+ ++V L + + + + D D A+ + Sbjct: 309 FAYYRVGEYVKALECAKAYLMFHPDDQDV-----LDNVDFYESLLDDSTDP-ASIEARED 362 Query: 162 MSRIVERY 169 ++ V+R+ Sbjct: 363 LTAFVKRH 370 >gi|42522672|ref|NP_968052.1| putative soluble lytic transglycosylase [Bdellovibrio bacteriovorus HD100] gi|39573868|emb|CAE79045.1| putative soluble lytic transglycosylase [Bdellovibrio bacteriovorus HD100] Length = 742 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 35/108 (32%), Gaps = 18/108 (16%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + KA E + + + A ++L ++ + + Y +++L E Sbjct: 357 GQYDKALELYKKLYTYHLGSDEAAEALFRASLIYFRKQDYTSSSALLER----------- 405 Query: 131 DYVYYLVGMSYAQMIRDV----PYDQRATKLMLQYMSRIVERYTNSPY 174 G + + ++ Q + ++ERY S Y Sbjct: 406 ---LLQQGRDRYDLNGQYWLVRSLQESKSERAAQAAADLIERYPFSYY 450 >gi|254229962|ref|ZP_04923364.1| Tol system periplasmic component YbgF [Vibrio sp. Ex25] gi|262394682|ref|YP_003286536.1| TPR repeat-containing protein [Vibrio sp. Ex25] gi|151937531|gb|EDN56387.1| Tol system periplasmic component YbgF [Vibrio sp. Ex25] gi|262338276|gb|ACY52071.1| TPR repeat-containing protein [Vibrio sp. Ex25] Length = 250 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 45/127 (35%), Gaps = 15/127 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + + Y +S Y A +G+ Y Sbjct: 137 YQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYS--------------ANSHYWLGQLYF 182 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A+ F V+ +Y D+ +A+ +L E +A++ + + YP Sbjct: 183 AKKQDKDAVKSFAAVV-SYKDSNKRADALLKLGEIAERNNNAAQAKKYYQQVVDEYPGSA 241 Query: 262 WARYVET 268 A+ + Sbjct: 242 SAKLASS 248 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 23/124 (18%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A + +++ YP+S +Y +G Y +D K ++ + + Sbjct: 146 KKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKKQD--------KDAVKSFAAV 197 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V Y +S A + A + + A +Q V+ Y + Sbjct: 198 VS-YKDSNKRADALLKLGEI----AERNNNAAQ----------AKKYYQQVVDEYPGSAS 242 Query: 226 AEEA 229 A+ A Sbjct: 243 AKLA 246 >gi|68472197|ref|XP_719894.1| hypothetical protein CaO19.6798 [Candida albicans SC5314] gi|68472432|ref|XP_719777.1| hypothetical protein CaO19.14090 [Candida albicans SC5314] gi|46441609|gb|EAL00905.1| hypothetical protein CaO19.14090 [Candida albicans SC5314] gi|46441735|gb|EAL01030.1| hypothetical protein CaO19.6798 [Candida albicans SC5314] Length = 1080 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 38/130 (29%), Gaps = 25/130 (19%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109 D Y + + +F+ AYE F Q P + Y + Sbjct: 359 DQSDAHSWYYLGRVEMIRGDFTAAYEAFQQAVNRDARNP-TFWC-----SIGVLYYQISQ 412 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIV 166 Y+ A I P + V+Y +G Y I D L + Sbjct: 413 YRDALDAYTRAIRLNP---YISEVWYDLGTLYETCNNQISD----------ALDAYRQAE 459 Query: 167 ERYTNSPYVK 176 N+P++K Sbjct: 460 RLDPNNPHIK 469 >gi|320159496|ref|YP_004172720.1| hypothetical protein ANT_00860 [Anaerolinea thermophila UNI-1] gi|319993349|dbj|BAJ62120.1| hypothetical protein ANT_00860 [Anaerolinea thermophila UNI-1] Length = 457 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 35/121 (28%), Gaps = 11/121 (9%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 ALT+ V L G + Q ++L + T R + + N A E + Sbjct: 19 LALTVILLAMVAVLRGLQTQQIEPLFLPTPTPTRTSNSYALEGQTHFQAGNLKGAIEAYQ 78 Query: 82 QCSRDFPFAG--VARKSLLMSAFVQY-------SAGKYQQAASLGEEYITQYPESKNVDY 132 Q + P + + + + +A + PE + Y Sbjct: 79 QALQSEPSNARIWMELAQI-QTYSYKSLTTREAQRQRLAEAIESANRAVELAPEDSSA-Y 136 Query: 133 V 133 Sbjct: 137 A 137 >gi|218245568|ref|YP_002370939.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 8801] gi|218166046|gb|ACK64783.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801] Length = 784 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 42/109 (38%), Gaps = 12/109 (11%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + +A + + + P V +L F+ +Y+QA S +E + P +N Sbjct: 663 GEYQEALKSCIKAIKLKPHKEVKEITLANKGFILMKLERYKQALSTFKEVLKLNPNHQN- 721 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 V Y + Y+ Q T ++Y+ + ++ Y+ A+ Sbjct: 722 --VLYKIACCYSL--------QNNTGQAIKYLKQAIKLKPE-KYINLAK 759 >gi|124005360|ref|ZP_01690201.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC 23134] gi|123989182|gb|EAY28760.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC 23134] Length = 255 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 45/133 (33%), Gaps = 19/133 (14%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS--AFVQYSAGKYQQAASLGEEY 120 V +LK+ F +A Y + F + + ++ S A +Y +A ++ Sbjct: 138 TGVAYLKQGKFQEAINYLEE----FSTSDLLVQARAYSLVADAYQELKQYDKAILNYKKA 193 Query: 121 ITQYPESKNVDYVYYLV-GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I P Y + + Y + K + R+++ Y N+ A+ Sbjct: 194 IDHEPNKFFTP-PYLMKLALVYELQNK--------PKAAIATYERLLKDYPNASDANNAK 244 Query: 180 FYVTVGRNQLAAK 192 Y LA K Sbjct: 245 KYKGKL---LAQK 254 >gi|325959562|ref|YP_004291028.1| hypothetical protein Metbo_1834 [Methanobacterium sp. AL-21] gi|325330994|gb|ADZ10056.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium sp. AL-21] Length = 693 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 64/189 (33%), Gaps = 31/189 (16%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 ++G ++ + + ++ D + ++ +++ N+ +A + F+ + Sbjct: 482 LMMLGRADEALKSYEMVTLMDPENYEAFHLTGLINMEQGNYDEALKNFDAVLNI---SPD 538 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 L+ K ++A +E + ES NV+ G++ M +D Sbjct: 539 NIDVLINKGQAYGFMDKPEKALEYFDEALDL--ESDNVE-ALNYRGVALKHMG---DHD- 591 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 ++ ++E +P+ +IG Y + GEY AI Sbjct: 592 ----ASIKTFEAVLEMEPENPWAWH-----------------QIGLNYKEVGEYEKAIES 630 Query: 213 FQLVLANYS 221 F L Sbjct: 631 FDNALDEDP 639 >gi|323449239|gb|EGB05129.1| hypothetical protein AURANDRAFT_59408 [Aureococcus anophagefferens] Length = 473 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 39/142 (27%), Gaps = 39/142 (27%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-----VARKSLLMSAFVQYSAGKYQQA 113 E+ + L ++S+A + +++ A Y A Sbjct: 5 ELKTQGNEALAAGHYSQA-------PSR-STGRTMRVLYSNRAM-----AHIKAESYGLA 51 Query: 114 ASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 S E I P Y YY G + + +L L+ + + + Sbjct: 52 ISDAEAAIRIDPT-----YIKAYYRRGSANFAL--------GKYRLALRDFKAVCKLRPS 98 Query: 172 SPYVKGARFYVTVG---RNQLA 190 AR + QLA Sbjct: 99 DR---DARTKLKECEKAVKQLA 117 >gi|323256482|gb|EGA40214.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] Length = 75 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 8/82 (9%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y+ GK AA + YP+S Y VG+ + D+ T Sbjct: 2 NYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGV--------IMQDKGDTAKAKAVYQ 53 Query: 164 RIVERYTNSPYVKGARFYVTVG 185 +++ +Y + K A+ + Sbjct: 54 QVINKYPGTDGAKQAQKRLNAM 75 >gi|313203636|ref|YP_004042293.1| hypothetical protein [Paludibacter propionicigenes WB4] gi|312442952|gb|ADQ79308.1| Tetratricopeptide TPR_1 repeat-containing protein [Paludibacter propionicigenes WB4] Length = 250 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 13/112 (11%), Positives = 31/112 (27%), Gaps = 21/112 (18%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + L I A L Q + +A + +++ A + Sbjct: 1 MKRIILFISILTAFSSL------------------TMAQSDAVSQANNLYTKGDYTSAAK 42 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + + GVA + Y + + ++ E + P + Sbjct: 43 QYETILSNQ---GVAPELYFNLGNAYYKSNEIGRSILNYERALRLSPSYDDA 91 >gi|268316401|ref|YP_003290120.1| Tetratricopeptide TPR_4 [Rhodothermus marinus DSM 4252] gi|262333935|gb|ACY47732.1| Tetratricopeptide TPR_4 [Rhodothermus marinus DSM 4252] Length = 929 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 22/51 (43%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 F+KA E + R +P + A +L++ + G Y AA E I Sbjct: 68 FNKAIEKSAEVVRRYPGSKWADDALMLIGQSYFYLGNYAGAAQKFREVIAL 118 Score = 38.9 bits (90), Expect = 0.70, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 16/98 (16%) Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 A ++ + +V RY S + A + IG+ Y G Y A +F Sbjct: 67 AFNKAIEKSAEVVRRYPGSKWADDAL--------------MLIGQSYFYLGNYAGAAQKF 112 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 + V+A EA L + VA DEA+ V+ Sbjct: 113 REVIAL--GGAKELEARFWLARSLVAARSFDEAQTVLQ 148 Score = 35.5 bits (81), Expect = 8.9, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA-LMDEAREVVSLIQ 254 + AI + V+ Y ++ A++A+ + ++Y L A++ +I Sbjct: 67 AFNKAIEKSAEVVRRYPGSKWADDALMLIGQSYFYLGNYAGAAQKFREVIA 117 >gi|91202529|emb|CAJ72168.1| hypothetical protein kustd1423 [Candidatus Kuenenia stuttgartiensis] Length = 300 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 18/136 (13%), Positives = 37/136 (27%), Gaps = 32/136 (23%) Query: 70 EQNFSKAYEYFNQCSR----------------DFPFAGVARKSLLMSAFVQYSAGKYQQA 113 +NF A + + + A Y+ G+Y++A Sbjct: 152 SKNFEDAVPQKEEVDASVEDGEERARMHNRLHRYLTGIEKETPPITIAECFYTLGEYEKA 211 Query: 114 ASLGEEYITQYPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + I P+ Y Y + + ++ L R ++ Sbjct: 212 LQGYKN-I---PQEAVTPYQYMWARYQIANC-FRQLKKYD-------DALNEFQRFIDEN 259 Query: 170 TNSPYVKGARFYVTVG 185 S + A++YV Sbjct: 260 PKSELIVQAKWYVDDI 275 >gi|163847233|ref|YP_001635277.1| protein-glutamate O-methyltransferase [Chloroflexus aurantiacus J-10-fl] gi|222525074|ref|YP_002569545.1| MCP methyltransferase, CheR-type with Tpr repeats [Chloroflexus sp. Y-400-fl] gi|163668522|gb|ABY34888.1| Protein-glutamate O-methyltransferase [Chloroflexus aurantiacus J-10-fl] gi|222448953|gb|ACM53219.1| MCP methyltransferase, CheR-type with Tpr repeats [Chloroflexus sp. Y-400-fl] Length = 472 Score = 40.9 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 31/92 (33%), Gaps = 8/92 (8%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAA 114 + V ++ ++ A E F + P A L ++A + G A Sbjct: 307 TEEAVVQEGRQLIENGQIDTALELFARV----PLAGRHAPMVLALAAQAHANRGDLDLAL 362 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 + + P + Y L+G+ Y + + Sbjct: 363 AEARRALELNPL---LTEAYLLLGLIYERQQQ 391 >gi|330790060|ref|XP_003283116.1| hypothetical protein DICPUDRAFT_146705 [Dictyostelium purpureum] gi|325086983|gb|EGC40365.1| hypothetical protein DICPUDRAFT_146705 [Dictyostelium purpureum] Length = 803 Score = 40.5 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 71/240 (29%), Gaps = 35/240 (14%) Query: 14 AWAYQLYKFALTIFFSIAVCFL-VGWERQSSRDVYLDSVTDVRYQ-REVYEKAVLFLKEQ 71 + + A+ F ++ L V + D + YQ + E+ + Sbjct: 379 LKTFNITAIAMMFFIIVSAILLPVMLTKYLKSDTEISEYKFNLYQYNQYMEEGKKNIGLG 438 Query: 72 NFSKAYEYFNQC--------SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 F+ A + + + K + S + G Y +A + E YI Sbjct: 439 QFNDAKVSYERALNVSKLLDKDQYILDSY--KGIFDSVYS---GGNYNEALVIAESYIAV 493 Query: 124 YPESKNVDYVYY--LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P S + Y + GM + + P +V +YT Y + Sbjct: 494 SPTSI-TAQLQYHQMRGMVFFNTGKLQPCIDE---------RLLVVKYTKQIYQNNS--- 540 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 NQ A +V +G Y + G Y AI + + Y + L Sbjct: 541 -----NQEAYSQVGVGTCYAEHGRYQDAIKYYTIAFNIYQTMNSTYRDKYYYAASLFHLG 595 >gi|300871059|ref|YP_003785931.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] gi|300688759|gb|ADK31430.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] Length = 653 Score = 40.5 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 73/235 (31%), Gaps = 57/235 (24%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQC------------SRDFPFAGVARKSLLMSAFVQYSA 107 ++ A ++++ + Y+N+ ++ + Y+ Sbjct: 291 LFNSAYQSDNNKDYNSSINYYNKIIEMINNLLKKYDKNSEEYSKYKNNISI----AYYNI 346 Query: 108 G-------KYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLML 159 G +Y++A ++ I P DY Y G++ + K + Sbjct: 347 GIVKNNLKQYKEAIEDYDKAIELNPN----DYMAYNNRGVAKMNL--------GQYKEAI 394 Query: 160 QYMSRIVERYTNSP--YVKGARFYVTVGRNQLAAKEVEIG--------RYYLKR------ 203 + + +E NS Y +G N+ A ++ + Y R Sbjct: 395 KDFDKSIELSQNSSETYNNRGNVKANLGLNKEAIEDYDKAIELNPNNSSAYNNRGISKSD 454 Query: 204 -GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256 G Y AI F + ++ EA + A L +EA ++ I+ Sbjct: 455 LGLYKEAIKDFDKAIELNPNSS---EAYSNRGNAKSDLNQYEEAIKDYNKAIELN 506 >gi|302307175|ref|NP_983751.2| ADL344Wp [Ashbya gossypii ATCC 10895] gi|299788873|gb|AAS51575.2| ADL344Wp [Ashbya gossypii ATCC 10895] Length = 910 Score = 40.5 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 43/142 (30%), Gaps = 22/142 (15%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108 D Y + + +++ AY+ F Q P + Y Sbjct: 307 ADSTDATTWYHLGRIHMVRNDYTAAYDAFQQAVNRDSRNP-TFWC-----SIGVLYYQIS 360 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y+ A I P + V+Y +G + + + D L + V Sbjct: 361 QYRDALDAYTRAIRLNP---YISEVWYDLG-TLYETCNNQLSD------ALDAYKQAVRL 410 Query: 169 YTNSPYVKGARFYVTVGRNQLA 190 N+ +++ + QLA Sbjct: 411 DPNNVHIRE---RLEALTAQLA 429 >gi|301111123|ref|XP_002904641.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase, putative [Phytophthora infestans T30-4] gi|262095958|gb|EEY54010.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase, putative [Phytophthora infestans T30-4] Length = 579 Score = 40.5 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 60/220 (27%), Gaps = 42/220 (19%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 D D +Y + + + ++ A F + P F Sbjct: 278 EDYTQALKMDPHNAFALYNRGISLDRSGDYQGALTDFTRAIELLPTNA---DFYHNRGFC 334 Query: 104 QYSAGKYQQAASLGEEYITQYPESK----NVDYVY------------YLVGM------SY 141 G ++ A + I P N Y Y Y + + Sbjct: 335 HRKQGNFELAIADYSRAIEFNPNHFKSLYNRAYSYDKLGRYQEAAQDYTAALRVEPENAN 394 Query: 142 AQMIRDVPYD-QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI---- 196 A R YD R T + R + S +R + +QL + + Sbjct: 395 AYHNRGSTYDKMRDTTRAIADFDRAIALQPRSVSSYNSR---GLCYDQLGRHQEALQDFA 451 Query: 197 ---------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 +Y RG + + RF+ + +YS A E Sbjct: 452 LALTLDPRSAVFYHNRGYCLRNMGRFEEAVQDYSSALALE 491 >gi|219847306|ref|YP_002461739.1| tetratricopeptide repeat-containing protein [Chloroflexus aggregans DSM 9485] gi|219541565|gb|ACL23303.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aggregans DSM 9485] Length = 1424 Score = 40.5 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 64/226 (28%), Gaps = 44/226 (19%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDF--PFAGVARKSLLMSAFVQY 105 ++ A+L + +++ A + P SL A++ Sbjct: 856 PDHPDTAASLHNLALLLASQGDYAAARPLYERALAIRERALGPDHPDTATSLDNLAYLLQ 915 Query: 106 SAGKYQQAASLGEEYI-----TQYPESKNV---------------DYV----YYLVGMSY 141 G Y A L E + P+ DY Y ++ Sbjct: 916 QQGDYAAARPLYERALAIRERALGPDHPQTATSLHNLALLLASQGDYAAARPLYERALAI 975 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL--------AAKE 193 ++ + AT L ++ ++E + + R + A Sbjct: 976 SERALGPDHPDTAT--SLNNLALLLESQGDDAAARPLYERALAIRERALGPDHPDTATSL 1033 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANY-----SDAEHAEEAMARLV 234 + R +G+Y AA P ++ LA Y D ++ L Sbjct: 1034 HNLARLLYHQGDYAAARPLYERALAIYERALGPDHPQTATSLNNLA 1079 >gi|196228021|ref|ZP_03126888.1| hypothetical protein CfE428DRAFT_0052 [Chthoniobacter flavus Ellin428] gi|196227424|gb|EDY21927.1| hypothetical protein CfE428DRAFT_0052 [Chthoniobacter flavus Ellin428] Length = 254 Score = 40.5 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 2/58 (3%) Query: 71 QNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 ++F+KA + F + A+ + M + +A + ++ T YP Sbjct: 91 KDFNKALTLLKAVTAKFKGMPSTWAQHATGMLGDTYIALNDISKAEAAYNDFKTLYPN 148 >gi|146422522|ref|XP_001487198.1| hypothetical protein PGUG_00575 [Meyerozyma guilliermondii ATCC 6260] Length = 529 Score = 40.5 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 44/159 (27%), Gaps = 33/159 (20%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQ 111 V ++ ++ K F +A E + + P + ++ + Y Sbjct: 3 VAEAVKLKDEGNEHFKAHRFDEAIESYTKAIEVDPKNAVFYSNRAQV-----HIKLENYG 57 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A +E + P YY G++ +++ K I++ N Sbjct: 58 LAIIDCDEALKVDPSFTK---AYYRKGVAQMAILK--------YKEAQANFKTILKTLPN 106 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 N YLK+ + AI Sbjct: 107 DKLTLENYK---QCVN------------YLKKQAFEKAI 130 >gi|115358177|ref|YP_775315.1| TPR repeat-containing protein [Burkholderia ambifaria AMMD] gi|115283465|gb|ABI88981.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria AMMD] Length = 285 Score = 40.5 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 4/100 (4%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + F+ + L G + S Q E+ A L N A Sbjct: 3 RSVIRALAFAAVLPVLAGGCAPGIQTRAALSHKSDDPQAEL-RIADSALSGGNVELASTL 61 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + + P + +A + L V Y AG ++A L E+ Sbjct: 62 YGKVLARHPDS-LA--AQLGLGDVNYRAGDLERARILYEQ 98 >gi|322434170|ref|YP_004216382.1| cell wall hydrolase/autolysin [Acidobacterium sp. MP5ACTX9] gi|321161897|gb|ADW67602.1| cell wall hydrolase/autolysin [Acidobacterium sp. MP5ACTX9] Length = 818 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 26/82 (31%), Gaps = 9/82 (10%) Query: 46 VYLDSVTDVRYQREVY-------EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +Y + D +Y E+ E + A F + +P +G+ +LL Sbjct: 66 IYHSNPADGHAPDAIYAVAELLAEQGRELHDEGSLRAAVAQFEFLRKQYPGSGLRTNALL 125 Query: 99 MSAFVQYSAGKYQQAASLGEEY 120 + AA E + Sbjct: 126 AEGRI--DETDLGDAAGAKERF 145 >gi|262065894|ref|ZP_06025506.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC 33693] gi|291380374|gb|EFE87892.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC 33693] Length = 438 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 18/43 (41%) Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 E + +Y L E + + L+++ +P W + E L Sbjct: 391 PEIYYNIASSYAKLGNRAEVTKYIRLLKQEFPNNSWTKKSEAL 433 >gi|209527035|ref|ZP_03275551.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] gi|209492546|gb|EDZ92885.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] Length = 1038 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 74/203 (36%), Gaps = 16/203 (7%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 +++ E R ++ + + A + + QA + E + +YP++ + Sbjct: 142 KDWQAIIEELETI-RQTENPKFSQNNYVSLAEAYRNNQQLAQAEFVAIEGLKKYPKNAKI 200 Query: 131 D--YVYYLVGMSYAQMIRDVPYDQR----ATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 Y L+ ++ I ++ + + R+++ Y NS ++ A Sbjct: 201 QNQYA--LIALAQENWIVASERLEKLLEMEAQKNWRTYYRLIQAYRNSEQLEKAELIAVK 258 Query: 185 GRNQLAAKEVE--IGRYY----LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 G + + I + Y L + ++ I + Q +L + EE A LV AY Sbjct: 259 GIQKYTNYPMFSTIQKEYCLIPLGQKDWGEEIEKLQGLLE-MQGQKAHEEVYADLVAAYS 317 Query: 239 ALALMDEAREVVSLIQERYPQGY 261 A +A + + +YP Sbjct: 318 ASQQFQKAERLATEGLHKYPNSS 340 >gi|254416035|ref|ZP_05029791.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] gi|196177210|gb|EDX72218.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] Length = 762 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 51/162 (31%), Gaps = 14/162 (8%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 + L G + + +V V +A L + A F R +P Sbjct: 4 LIGLGLAGLAISTPMVYTIPAVHAQTVPTAV-RQAFSLLSQGRVQDAIAAFEAAVRRYPD 62 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + L A G QQA + ++ + Q P ++ L + R Sbjct: 63 S---LDAKLGLAIAHRRQGNLQQAWNAYQQVLAQDPTNELA-----LKSVGLFGTYRSEW 114 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Q ++ ++ ++ N +G R + + + A Sbjct: 115 QVQG-----IEALTTLLNLNPNDIEARGLRAQLYGFQQRFAE 151 >gi|56751970|ref|YP_172671.1| soluble lytic transglycosylase [Synechococcus elongatus PCC 6301] gi|56686929|dbj|BAD80151.1| probable soluble lytic transglycosylase [Synechococcus elongatus PCC 6301] Length = 690 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 64/184 (34%), Gaps = 31/184 (16%) Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E + Q +P + V +++L G++ A + + + YP S + Sbjct: 133 ETWRQLLNTYPESPVQAEAVLAL-------GQWDLAPATIQRWPR-YPASNELA------ 178 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 Q+ + P + + L + R R+ + + N A +I Sbjct: 179 ----RQLAKRQPAEAKRWLLQIAQFGRY--RF----DIDAVLSELQALPNLTARDRQQIA 228 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 Y +R +Y A Y+ + +E + R + + + AR + + +R+ Sbjct: 229 DAYWQRDDYATAA-------DLYARSPQTDETLYRQARSLDLTSQPEVARTLYQQLLQRF 281 Query: 258 PQGY 261 PQ Sbjct: 282 PQSP 285 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 27/86 (31%), Gaps = 15/86 (17%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 A + Y AA Y S D Y S D+ + + Sbjct: 227 IADAYWQRDDYATAAD-------LYARSPQTDETLYRQARSL-----DLTSQPEVARTLY 274 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVG 185 Q ++++R+ SP + A ++ Sbjct: 275 Q---QLLQRFPQSPERERALVHLVRL 297 >gi|317060755|ref|ZP_07925240.1| predicted protein [Fusobacterium sp. D12] gi|313686431|gb|EFS23266.1| predicted protein [Fusobacterium sp. D12] Length = 409 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEA--MARLVEAYVALALMDEAREVVSLIQERY 257 Y G Y +I FQ VL + + A +L AY + E ++ +SL++ERY Sbjct: 334 YYGLGNYQQSIEYFQKVLTH-KGVSAEKRAEVYYKLASAYNKVGEKREYKKYLSLLKERY 392 Query: 258 PQGYWARYVE 267 W + + Sbjct: 393 ANTLWGKKAQ 402 >gi|218461258|ref|ZP_03501349.1| hypothetical protein RetlK5_17827 [Rhizobium etli Kim 5] Length = 110 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 14/104 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 Q ++ + RY +S A F++ +G+Y A F Sbjct: 5 AEQEFNQYIARYPSSARAADANFWLGEAL--------------YSQGKYNEAAKTFLNAH 50 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y +E A E + +L + AL + A + + +RYP+ Sbjct: 51 QKYGSSEKAPEMLLKLGMSLAALDNKETACATLREVSKRYPKAS 94 Score = 35.5 bits (81), Expect = 8.9, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 14/103 (13%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP---ESK 128 ++ A + FNQ +P + A + YS GKY +A + ++ + S+ Sbjct: 1 DYGTAEQEFNQYIARYPSSARAADANFWLGEALYSQGKYNEA---AKTFLNAHQKYGSSE 57 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + +GMS A + + + + +RY Sbjct: 58 KAPEMLLKLGMSLAALDNK--------ETACATLREVSKRYPK 92 >gi|332706444|ref|ZP_08426505.1| methyl-accepting chemotaxis protein [Lyngbya majuscula 3L] gi|332354328|gb|EGJ33807.1| methyl-accepting chemotaxis protein [Lyngbya majuscula 3L] Length = 1019 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 6/96 (6%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-YSAGKYQQAASLG 117 ++Y +A + + +A ++ DFP +LL+ + Y +Y A Sbjct: 9 QLYGEAEKAYMQGKYQEAATLVDRLIEDFPNEP---SALLLRGHIYCYGLQQYDLARQQY 65 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 E + E V+Y G+ YAQ + D Sbjct: 66 ESVLNLTSEPDFVNYANN--GLEYAQQSTNGHQDPG 99 >gi|298250743|ref|ZP_06974547.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM 44963] gi|297548747|gb|EFH82614.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM 44963] Length = 850 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 69/226 (30%), Gaps = 47/226 (20%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLM-SA 101 ++ AVL+ K +++A + D P VA L A Sbjct: 520 PDHYETASVLHNLAVLYWKMGKYAEAEPLLQRALLIRGKTLDMDHP--DVAT--TLNYLA 575 Query: 102 FVQYSAGKYQQAASLGEEYIT-----QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + + GKY +A L + + P+ N+ Y + + YA+ Q Sbjct: 576 LLYWKMGKYAEAEPLLQRALHIWEQALNPDHPNIAYPLNNLAILYAE--------QGKYA 627 Query: 157 LMLQYMSRIVERYTN---SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 R + + S + A+ N LA + + +Y A + Sbjct: 628 EAEPLFQRALHIWEQSKGSEHPDVAQA----LHN-LAELSLI-------QEKYAEAESLY 675 Query: 214 QLVL-----ANYSDAEHAEEAMARLVEAYVALALMDEARE-VVSLI 253 Q VL A+ D E + L Y EA ++ Sbjct: 676 QRVLHLRVQAHGPDHPSVAETLNSLATLYQNQGKFAEAEALYQRVL 721 >gi|257463163|ref|ZP_05627563.1| hypothetical protein FuD12_04856 [Fusobacterium sp. D12] Length = 407 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEA--MARLVEAYVALALMDEAREVVSLIQERY 257 Y G Y +I FQ VL + + A +L AY + E ++ +SL++ERY Sbjct: 332 YYGLGNYQQSIEYFQKVLTH-KGVSAEKRAEVYYKLASAYNKVGEKREYKKYLSLLKERY 390 Query: 258 PQGYWARYVE 267 W + + Sbjct: 391 ANTLWGKKAQ 400 >gi|34541238|ref|NP_905717.1| batE protein [Porphyromonas gingivalis W83] gi|34397554|gb|AAQ66616.1| batE protein [Porphyromonas gingivalis W83] Length = 302 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 8/123 (6%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQC--SRD 86 +V V ++ +V +S D ++ E+ + + +A + + Sbjct: 38 SVFLPVDSSSIATSEVETESAADSSATGKILSAEEIRRLFDAKQYGRAATAYERILRETA 97 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 P A + L Y +G+ + + E P K++ + G+ I Sbjct: 98 QPDASL----LYNLGCCYYKSGEVALSILMFERAYRLAPNDKDIRVNLEMAGLKAFDKIS 153 Query: 147 DVP 149 D Sbjct: 154 DSE 156 >gi|296105261|ref|YP_003615407.1| cellulose synthase subunit BcsC [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059720|gb|ADF64458.1| cellulose synthase subunit BcsC [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 1160 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 84/230 (36%), Gaps = 24/230 (10%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + ++ +A + +++A E + P Sbjct: 444 SLSASQRRSIDDIERSLTNEQLSAQAEQLENQGKYAQAAEVQRRRLALSPGDVW---ITY 500 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVG-------MSYAQMIRDVP 149 + YSAG+ QA +L + +Q P + Y YL G +++ + + Sbjct: 501 RLSRDLYSAGQRSQADTLMRQLASQKPTDPDQVYANGLYLSGNDQDRAALAHLETLPRSQ 560 Query: 150 YD---QRAT-KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA--AKEVEIGRYYLKR 203 ++ Q +L + R +S + A + R Q A ++ + + +R Sbjct: 561 WNGNIQELADRLQSNQVLDTANRLRDSGKEQEAE---NLLRQQPASTRIDLTLADWAQQR 617 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 G+ AA + VL E+A+ L E Y A D AR ++ + Sbjct: 618 GDLSAAKTAYSGVL---QREPQNEDAILGLTEIYSAQGDKDAARAELAKL 664 >gi|294507615|ref|YP_003571673.1| Conserved hypothetical protein containing TPR domain [Salinibacter ruber M8] gi|294343942|emb|CBH24720.1| Conserved hypothetical protein containing TPR domain [Salinibacter ruber M8] Length = 681 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 77/262 (29%), Gaps = 38/262 (14%) Query: 21 KFALTIFFSIAVCFLVGWE---RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + A + + L+G S ++ + T R + + + ++ +A Sbjct: 101 RLAPPLGAVLLCTLLMGGPPPTVASPAVLFPSADTTSPRARRLLIQGTTEAQLGDYEEAI 160 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 +F P A LL A + G A TQ S Sbjct: 161 SHFEAALEQVP---EAPVLLLALADAHEAQGALSTALFYARRAQTQ--GSPRP------- 208 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV----GRNQLAAKE 193 S + + ++ L+ ++++ N+ AR + + + + E Sbjct: 209 --SPYRRLAEMQRAAGDPAAALRTYQQLLDHVPNANDAHRARAAIQADLGRTKGAIQSYE 266 Query: 194 VEIGR--------------YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + R Y K G+ + ++ + RL E Y Sbjct: 267 IYLQRADSPPIDVYRRLLSLYRKTGDKDGVETTLRTLVERRPTVRSYQR---RLGEYYAD 323 Query: 240 LALMDEAREVVSLIQERYPQGY 261 +A +++ + ++P Sbjct: 324 EGRPRKALALLAPLGRQFPNDE 345 >gi|162449215|ref|YP_001611582.1| soluble lytic murein transglycosylase [Sorangium cellulosum 'So ce 56'] gi|161159797|emb|CAN91102.1| soluble lytic murein transglycosylase [Sorangium cellulosum 'So ce 56'] Length = 865 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 60/190 (31%), Gaps = 26/190 (13%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 R +Y L+ ++A F +++P +A + + A G Q Sbjct: 404 RRPETLYNAGRASLRVDRHAEAAARFALLEKEYPDHRLADDARYLGARALLGLGDQAQFV 463 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 L YP V + + + +M R ++ + R +ER+ Sbjct: 464 QLLTAMPDDYPSGDMVADGLFELAL--FEMERG------DWAGAVRPLERALERFP-HER 514 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 A + +GR +++ G + V+ +Y + + Sbjct: 515 AYHAAGRLPY----------YLGRAHIETGSPDKGKALLEQVIRDYPLS-------FYMA 557 Query: 235 EAYVALALMD 244 ++ LA +D Sbjct: 558 LSHARLADVD 567 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 38/102 (37%), Gaps = 12/102 (11%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQ 104 D + ++E A+ ++ +++ A + FP A + + Sbjct: 472 DYPSGDMVADGLFELALFEMERGDWAGAVRPLERALERFPHER-AYHAAGRLPYYLGRAH 530 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 G + +L E+ I YP S +Y+ +S+A++ Sbjct: 531 IETGSPDKGKALLEQVIRDYPLS------FYM-ALSHARLAD 565 >gi|91226890|ref|ZP_01261487.1| putative heat shock protein [Vibrio alginolyticus 12G01] gi|269966530|ref|ZP_06180613.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|91188853|gb|EAS75138.1| putative heat shock protein [Vibrio alginolyticus 12G01] gi|269828874|gb|EEZ83125.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 391 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 24/184 (13%), Positives = 56/184 (30%), Gaps = 30/184 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A ++ +A + F Q + + A + L++ + ++++A + Sbjct: 114 AKDYMVSGFLDRAEKIFEQLVEEPDYKEAALQ-QLVTIY--QQTREWEKAIYYANQLAKL 170 Query: 124 YPESKNVDYVYYLVG-MSYA-QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 +K + +++ I + T +Q+ + + A Sbjct: 171 --GNKRSR----MRANIAHFWCEIAMLDQADGNTNKAIQHFKKALAEDPKCVRASIALGR 224 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 + YL+ +Y I VL D + + + + E Y L Sbjct: 225 I-----------------YLESEDYKHTIKYLTGVLE--QDKDFISDVLPTIAECYHHLG 265 Query: 242 LMDE 245 DE Sbjct: 266 QEDE 269 >gi|91216109|ref|ZP_01253077.1| tetratricopeptide repeat domain protein [Psychroflexus torquis ATCC 700755] gi|91185626|gb|EAS72001.1| tetratricopeptide repeat domain protein [Psychroflexus torquis ATCC 700755] Length = 605 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 7/132 (5%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 R ++ KA L L + +A D + + L A + + ++A Sbjct: 476 RTDLKLVAKADLLLFQNQPIQALTILEGVLEDHQSPSIVDEVLFRIAKLHLANQDVEKAL 535 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + + ++ + D +L+G Y ++ Y ++ + +S Y Sbjct: 536 PYLQRIVDKHSDEILADNANFLLGTLYMDELKTPD-------QAKPYFETLIFNHPDSLY 588 Query: 175 VKGARFYVTVGR 186 AR + R Sbjct: 589 FVDARKRFRMLR 600 >gi|74318217|ref|YP_315957.1| TPR repeat-containing protein [Thiobacillus denitrificans ATCC 25259] gi|74057712|gb|AAZ98152.1| conserved hypothetical protein containing TPR repeat [Thiobacillus denitrificans ATCC 25259] Length = 555 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 49/188 (26%), Gaps = 32/188 (17%) Query: 12 FEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV------Y-EKA 64 + + AL++ + A + SS D V Y + Sbjct: 375 YRLSNGMFWSLALSVALAFAWVSSDRLQTFSSTYALWDDAAKKLPDERVLGSARVYANRG 434 Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 L ++ +F A + F + R P A K AF G + +A + I Sbjct: 435 GLRMERGDFGGAVDDFTRALRADPGYREALKGR---AFAHMKRGDHSRALADATALIRLD 491 Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR--IVERYT---------NSP 173 P ++ V DQ +L R+ +S Sbjct: 492 PSRRD-----------SYIARGHVYKDQGDWRLAKADFEYGCAGMRFPAACMAVLTRDSE 540 Query: 174 YVKGARFY 181 A Sbjct: 541 KSDPAAQR 548 >gi|322701171|gb|EFY92922.1| mitochondrial outer membrane 72Kda protein [Metarhizium acridum CQMa 102] Length = 622 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 47/141 (33%), Gaps = 20/141 (14%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDF 87 ++ +G ++ + D Y +A + + ++A + + + +DF Sbjct: 377 SISLELGEPVKADAEFAKALEQDKDDPDVYYHRAQASFIKGDLAEAQKDYQKSIDLDKDF 436 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 F+ + QY G + + I +P+ +V Y YY + Sbjct: 437 IFSH------IQLGVTQYKMGSIASSMATFRRCIKNFPKVPDV-YNYY----------GE 479 Query: 148 VPYDQRATKLMLQYMSRIVER 168 + DQ ++ +E Sbjct: 480 LLLDQSNFSEAVEKFDTAMEM 500 >gi|310816575|ref|YP_003964539.1| tetratricopeptide TPR_2 repeat protein [Ketogulonicigenium vulgare Y25] gi|308755310|gb|ADO43239.1| tetratricopeptide TPR_2 repeat protein [Ketogulonicigenium vulgare Y25] Length = 278 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 33/77 (42%), Gaps = 3/77 (3%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++E + +A L + +F A + F + +P ++ +++L Q G+ +A Sbjct: 155 EQEDFARASEALAQGDFRSAADGFATYLQTYPGGALSAEAMLRRGEAQEGLGQISEA--- 211 Query: 117 GEEYITQYPESKNVDYV 133 ++ + + + Y Sbjct: 212 ARSFLESFAGAPDGAYA 228 >gi|84501654|ref|ZP_00999826.1| hypothetical protein OB2597_15670 [Oceanicola batsensis HTCC2597] gi|84390275|gb|EAQ02834.1| hypothetical protein OB2597_15670 [Oceanicola batsensis HTCC2597] Length = 279 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 15/126 (11%), Positives = 37/126 (29%), Gaps = 22/126 (17%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-------YQQA 113 ++ A L + + + A F+ +P + + ++ L + G+ Y A Sbjct: 160 FDAAQAALDDGDAAGAATRFDSFLTTYPGSPLQAQAELGKGRALEAQGEITKASRAYLAA 219 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 S P+ + ++ + R+ ++P Sbjct: 220 FSAA-------PDGPVAAEA--------LLKLGQGLGQLGQGPEACTTLAEVANRFPDAP 264 Query: 174 YVKGAR 179 V A+ Sbjct: 265 QVAQAQ 270 >gi|224024925|ref|ZP_03643291.1| hypothetical protein BACCOPRO_01656 [Bacteroides coprophilus DSM 18228] gi|224018161|gb|EEF76159.1| hypothetical protein BACCOPRO_01656 [Bacteroides coprophilus DSM 18228] Length = 251 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 7/74 (9%), Positives = 20/74 (27%), Gaps = 13/74 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-----LMSAFVQYSAGKYQQAASL 116 A +E +++A + + +A + + +A Sbjct: 26 ADADKAYQENKYAEAIKMYENI--------LATQGESAVVYYNLGNSYFKEKNMAKAVLN 77 Query: 117 GEEYITQYPESKNV 130 E + P ++ Sbjct: 78 YERALLLNPGDADI 91 >gi|164655526|ref|XP_001728892.1| hypothetical protein MGL_3886 [Malassezia globosa CBS 7966] gi|159102780|gb|EDP41678.1| hypothetical protein MGL_3886 [Malassezia globosa CBS 7966] Length = 331 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 8/90 (8%), Positives = 30/90 (33%), Gaps = 7/90 (7%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKS 96 + ++ D S D + ++ +++ A + + + P++ + ++ Sbjct: 82 DSGANVDTKHVSEEDSSKAESLKNDGNKYMSAKDYGAALDSYTKAIELNPYSPVFYSNRA 141 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 G++ +A + + P Sbjct: 142 A-----AYSQIGQHDEAIADARKAAEINPT 166 >gi|149631899|ref|XP_001506573.1| PREDICTED: similar to KIAA0155 isoform 2 [Ornithorhynchus anatinus] Length = 1165 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 99/273 (36%), Gaps = 33/273 (12%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 A L RA E + ++T +++A + E + +Y + + + + Y Sbjct: 476 ASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYL 535 Query: 63 K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + + NF +A ++F + ++D P + L A ++ E Sbjct: 536 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 589 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSPY 174 + Q P ++N Y +G + Q + D+ R L +++ + Y Sbjct: 590 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLY 648 Query: 175 VKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVL 217 + Y R+ A +E + + Y+++ +Y++A+ ++ L Sbjct: 649 AANGIGAVLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCL 708 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 + ++ E + L A + E ++ + Sbjct: 709 RKFYKHQNTEVVLY-LARALFKCGKLQECKQTL 740 >gi|74755898|sp|Q5R3I4|TTC38_HUMAN RecName: Full=Tetratricopeptide repeat protein 38; Short=TPR repeat protein 38 gi|56208100|emb|CAI18791.1| novel protein [Homo sapiens] Length = 469 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 45/150 (30%), Gaps = 29/150 (19%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYE 78 L+G D LD + +++ AV NF KA E Sbjct: 70 MATGLVLIGTGSSVKLDKELDLAVKTMVEISRTQPLTRREQLHVSAVETFANGNFPKACE 129 Query: 79 YFNQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDY 132 + Q +D P M A + G +Q YP + ++ Sbjct: 130 LWEQILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPL 178 Query: 133 VYYLVGMSYAQMIRDVPYDQ--RATKLMLQ 160 Y+ G+ ++ YDQ + K L Sbjct: 179 SSYVKGIYSFGLMETNFYDQAEKLAKEALS 208 >gi|116812608|ref|NP_060401.2| tetratricopeptide repeat protein 38 [Homo sapiens] gi|32949297|gb|AAH18918.2| Tetratricopeptide repeat domain 38 [Homo sapiens] gi|119593820|gb|EAW73414.1| hypothetical protein FLJ20699, isoform CRA_c [Homo sapiens] gi|312151730|gb|ADQ32377.1| hypothetical protein FLJ20699 [synthetic construct] Length = 469 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 45/150 (30%), Gaps = 29/150 (19%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYE 78 L+G D LD + +++ AV NF KA E Sbjct: 70 MATGLVLIGTGSSVKLDKELDLAVKTMVEISRTQPLTRREQLHVSAVETFANGNFPKACE 129 Query: 79 YFNQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDY 132 + Q +D P M A + G +Q YP + ++ Sbjct: 130 LWEQILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPL 178 Query: 133 VYYLVGMSYAQMIRDVPYDQ--RATKLMLQ 160 Y+ G+ ++ YDQ + K L Sbjct: 179 SSYVKGIYSFGLMETNFYDQAEKLAKEALS 208 >gi|24583150|ref|NP_524895.2| FK506-binding protein FKBP59 [Drosophila melanogaster] gi|74869710|sp|Q9VL78|FKB59_DROME RecName: Full=FK506-binding protein 59; AltName: Full=Peptidyl-prolyl cis-trans isomerase; Short=PPIase; AltName: Full=Rotamase; AltName: Full=dFKBP59 gi|7297564|gb|AAF52818.1| FK506-binding protein FKBP59 [Drosophila melanogaster] gi|16198261|gb|AAL13958.1| LD47530p [Drosophila melanogaster] gi|220946436|gb|ACL85761.1| FKBP59-PA [synthetic construct] Length = 439 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 53/164 (32%), Gaps = 25/164 (15%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 LV + D + + +VY EK + K++N++ A + + +C P Sbjct: 231 LVDCGKGLEEWKLSDE--ERLAEAKVYKEKGTNYFKKENWALAIKMYTKCKNILPTTVHT 288 Query: 94 ----RKSLL----MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +K + A + + +A E + KN Y G + Sbjct: 289 NEEVKKIKVATHSNIALCHQKSNDHFEAKQECNEVLAL---DKNNVKALYRRGQCNLTI- 344 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + L+ ++++ + A V + + +L Sbjct: 345 -------NELEDALEDFQKVIQLEPGNK---AAANQVIICKQKL 378 >gi|83859797|ref|ZP_00953317.1| TPR repeat protein [Oceanicaulis alexandrii HTCC2633] gi|83852156|gb|EAP90010.1| TPR repeat protein [Oceanicaulis alexandrii HTCC2633] Length = 317 Score = 40.5 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 37/138 (26%), Gaps = 22/138 (15%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 V ++E A L + +F A E + +P ++ + G Sbjct: 185 PPEPVMDADTLFETANARLLDGDFGGARELLRDFTETYPDDQKVGQAWYWLGETHFINGD 244 Query: 110 YQQAASLG------EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 +Q AA + + +G S A + T Q ++ Sbjct: 245 FQDAADSYIASLQEDR------QGPRAPDALVRLGASLAAL--------GETSRACQVLA 290 Query: 164 RIVERYTNSPYVKGARFY 181 + + AR Sbjct: 291 TFPSEFPRA--GDDARRK 306 Score = 35.9 bits (82), Expect = 7.0, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 14/101 (13%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + + E Y + V A ++ L G + Y+A+ L Sbjct: 211 ARELLRDFTETYPDDQKVGQAWYW-------LGETHFINGDFQDAADSYIAS-------L 256 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 A +A+ RL + AL A +V++ +P Sbjct: 257 QEDRQGPRAPDALVRLGASLAALGETSRACQVLATFPSEFP 297 >gi|310822888|ref|YP_003955246.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309395960|gb|ADO73419.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 1216 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 61/162 (37%), Gaps = 34/162 (20%) Query: 93 ARKSLLMSAFVQYSAGKYQQ-AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 + K+ L++ + +Y + A + + +YP + D V + +G + +D Sbjct: 167 SEKAELIA-----RSKEYGKHAVEQYTKIVQEYPSFERSDEVLFFLGNFLMEDGQD---- 217 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL-----KRGEY 206 + L R+VE++ S ++ + G YY KR E Sbjct: 218 ----RKALVAYKRLVEKFPKSKFLPDVY--------------LAFGEYYFNNSKGKRPEL 259 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 A+ ++ +++++ A+ + Y + +A++ Sbjct: 260 EKALEAYRRAAE-FTESQAYAFAIYKQGWCYFNMGEYAQAKD 300 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 8/82 (9%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 D + +Y +V F K + +A E +P + S + Sbjct: 734 VKDFPETTIADQALYNASVDFFKAKMLDRAIEVRQSLISQYPRSRFVP----DSIYANAE 789 Query: 107 A----GKYQQAASLGEEYITQY 124 A G + QAA E Y+ Y Sbjct: 790 ALEAIGDFAQAADTYELYVKGY 811 >gi|116622726|ref|YP_824882.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116225888|gb|ABJ84597.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 547 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 66/200 (33%), Gaps = 34/200 (17%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + A+ K F +A E +++C + P + + V+ G A S E Sbjct: 270 FNLALAHQKSGRFEQAAEAYSECVKLRPQSCESHT---NLGIVREQTGDTAGARSSYERA 326 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I P+ ++ + + + +Y ++++R + ARF Sbjct: 327 IKAGPD-----------ALAPLWNLALLLEHAGQFEESERYYKQVLDRAPK---EEEARF 372 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + R L+R +Y A F+ L EA A L AY + Sbjct: 373 RMGFLR--------------LQREDYRGAAEAFEGCLKYRP---AWPEAHANLALAYSGM 415 Query: 241 ALMDEAREVVSLIQERYPQG 260 D A + + + P+ Sbjct: 416 GERDHAERLYEKMLDADPKS 435 >gi|302037598|ref|YP_003797920.1| hypothetical protein NIDE2282 [Candidatus Nitrospira defluvii] gi|300605662|emb|CBK41995.1| protein of unknown function, TPR-like [Candidatus Nitrospira defluvii] Length = 693 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 63/207 (30%), Gaps = 37/207 (17%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE--- 119 +A + A + S +P +L + Y A + Sbjct: 202 QAHSLYRMGRIKDADALYESLSSRWP------AALRADPYALLR---YADTAGEAQRGPV 252 Query: 120 -------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + YP +V + SY + R + + + ++ +Y ++ Sbjct: 253 MREQLLHFYNLYPSRPENPFVLMHLADSYKEAGR--------WEDASMFYAALMSQYPDA 304 Query: 173 PYVKGARFYVTVGRNQL--AAKEV--------EIGRYYLKRGEYVAAIPRFQLVLANYSD 222 V AR + L +EV + LK GE ++ F+ Y D Sbjct: 305 QVVPTARLRYADVQEHLTPEGEEVNLRHTIAAHLANVPLKPGEMLSPRQLFESSAKQYED 364 Query: 223 AEHAEEAMARLVEAYVALALMDEAREV 249 + EA+ L +A ++A + Sbjct: 365 SPVGSEALFHLGQALERAGKQEDALKA 391 >gi|56750530|ref|YP_171231.1| hypothetical protein syc0521_c [Synechococcus elongatus PCC 6301] gi|56685489|dbj|BAD78711.1| hypothetical protein [Synechococcus elongatus PCC 6301] Length = 135 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 31/81 (38%), Gaps = 10/81 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++A + + ++A + + P FA R+++L Y G+Y ++ + Sbjct: 45 QRAEVLMTAGEMAEAEQLLSDLINQLPDFAEAWNRRAVL-----HYLQGRYSESLEDCDR 99 Query: 120 YITQYPESKNVDYVYYLVGMS 140 I P + G+S Sbjct: 100 VIDLNPIHFG---ALHGKGLS 117 >gi|291569240|dbj|BAI91512.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 1337 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 48/141 (34%), Gaps = 21/141 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + + + KA ++Q + F ++ Y G+Y++A S ++ Sbjct: 385 YNRGLALGNLGEYEKAISSYDQAIK---FKPDYHEAWFNRGLALYDLGEYEKAISSYDQA 441 Query: 121 ITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 I P DY +++ G++ + + + + + ++ + + A Sbjct: 442 IKFKP-----DYHEAWFVRGVALSYL--------GEHEKAISSYDQAIKIKPD---LHEA 485 Query: 179 RFYVTVGRNQLAAKEVEIGRY 199 + L E I Y Sbjct: 486 WSNRGSALSHLGEYEKAISSY 506 >gi|227356456|ref|ZP_03840844.1| cellulose synthase protein [Proteus mirabilis ATCC 29906] gi|227163566|gb|EEI48487.1| cellulose synthase protein [Proteus mirabilis ATCC 29906] Length = 1090 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 78/213 (36%), Gaps = 32/213 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + KA L Q +S A YF Q + + ++ + ++ + + +QA ++ Sbjct: 279 LLAKADEALLNQEYSVAKRYFTQVRQL---SPYKSEAYIGLGDIELAQHQLEQAERYYQQ 335 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P L ++ Q++ + Q+M+ + + Y A+ Sbjct: 336 ALQYQPNDAAT-----LHSLTKLYR-------QQSHQKAAQFMANLTSQ----QYKNLAQ 379 Query: 180 FY---VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 Y ++ + LAA + ++ Y++AI + + + Y D + RL + Sbjct: 380 DYGYIISGIQQDLAADD-------EQQQHYLSAIEKRKAIAKAYPDEVWN---IYRLADD 429 Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETL 269 + A + + + +R P RY L Sbjct: 430 LLITQQPQLAEDYFNQLNQRRPNDPSRRYAYAL 462 >gi|216264231|ref|ZP_03436223.1| conserved hypothetical protein [Borrelia burgdorferi 156a] gi|223888834|ref|ZP_03623425.1| conserved hypothetical protein [Borrelia burgdorferi 64b] gi|225549074|ref|ZP_03770049.1| conserved hypothetical protein [Borrelia burgdorferi 94a] gi|215980704|gb|EEC21511.1| conserved hypothetical protein [Borrelia burgdorferi 156a] gi|223885650|gb|EEF56749.1| conserved hypothetical protein [Borrelia burgdorferi 64b] gi|225370300|gb|EEG99738.1| conserved hypothetical protein [Borrelia burgdorferi 94a] Length = 228 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 19/176 (10%), Positives = 57/176 (32%), Gaps = 36/176 (20%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 +TI + ++ + L+ + ++Y+K++L + ++KA E + Sbjct: 4 ITIMILFYGLIINVCPTTTTSILKLNKKANKHTIEKLYQKSMLLKDSKKYNKAIESLTKI 63 Query: 84 SRDFPFAGVARKSLLMSAFVQ-------YSAGKYQQAASLGEEYITQ------YPESKNV 130 A Y +++A ++Y+ ++ Sbjct: 64 INM----------DQNQADAHLLLSELEYLNKNWKKAIIKSQDYLKIIDFKDKN-NFLDI 112 Query: 131 DYVYYLVG---------MSYAQMIRDVPYDQRATKLMLQY-MSRIVERYTNSPYVK 176 + Y+L+G + + Q +++ + + + + +TN+ Sbjct: 113 SWAYFLIGEVKNSMDYIIKFFQSGKELFR--ENIFIAIDALFKKSIYHFTNNENAA 166 >gi|163786667|ref|ZP_02181115.1| hypothetical protein FBALC1_15817 [Flavobacteriales bacterium ALC-1] gi|159878527|gb|EDP72583.1| hypothetical protein FBALC1_15817 [Flavobacteriales bacterium ALC-1] Length = 594 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 7/126 (5%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y KA LF + +A ++ + + ++L A + +Y +A + E Sbjct: 471 YAKADLFAFQNKTDEAISLLDKILTEHKGESITDQTLFKQAKLFEKKKQYNKAEANYLEI 530 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I Y E D +Y + Y + + Q +I+ + +S Y AR Sbjct: 531 IKDYREDILADDAHYYLAELYNTFLAKP-------EDAKQLYEKIIFEFEDSIYFIEARK 583 Query: 181 YVTVGR 186 + R Sbjct: 584 KFRMLR 589 >gi|149176885|ref|ZP_01855495.1| hypothetical protein PM8797T_14082 [Planctomyces maris DSM 8797] gi|148844322|gb|EDL58675.1| hypothetical protein PM8797T_14082 [Planctomyces maris DSM 8797] Length = 348 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 70/210 (33%), Gaps = 30/210 (14%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 L ++++ A F R P+ + M A V + G + A + E Sbjct: 159 GESQLAKKDYVAANSAFGTVERS-PWKDYQMDAKNMKARVLLAQGNTKGALAAFETVAKM 217 Query: 124 Y---PE---SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 P +K+ +G + P D ++ + I++ ++S Sbjct: 218 DGKTPGELANKHAA----QLGSAICLEKDGKPQD------AIKVLDEIIKNVSSSQ---- 263 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE-EAMARLVEA 236 + LA ++ G Y GE A+ + V + EA+ L Sbjct: 264 --------SSLLAEAYLKKGDCYQALGESKEALIAYLHVDVLFPSEPAVHAEALYHLSTL 315 Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266 + + + E +++Q++YP W + Sbjct: 316 WGKVQKPERGNEARAVLQQQYPDSEWTQKA 345 >gi|86159124|ref|YP_465909.1| hypothetical protein Adeh_2702 [Anaeromyxobacter dehalogenans 2CP-C] gi|85775635|gb|ABC82472.1| hypothetical protein Adeh_2702 [Anaeromyxobacter dehalogenans 2CP-C] Length = 285 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 41/121 (33%), Gaps = 9/121 (7%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 ++ +A + +P A +LL SA +AG+ + A +L +Y Sbjct: 156 RAARRKGGLDRA-HALEDFTARYPRHPAADNALLESAEAYAAAGRNEAACALVRRTADEY 214 Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 P + + A++ R + R+V+ Y +P + A + Sbjct: 215 PAGDAMSAALERLAACAARLGR--------ADEERSLLQRLVDDYPGTPAAQRAGGRLGH 266 Query: 185 G 185 Sbjct: 267 L 267 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 34/120 (28%), Gaps = 26/120 (21%) Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 E++ +YP D +YA R+ + + R + Y + Sbjct: 169 ALEDFTARYPRHPAADNALLESAEAYAAAGRN--------EAACALVRRTADEYPAGDAM 220 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR--FQLVLANYSDAEHAEEAMARL 233 A + +L A R Q ++ +Y A+ A RL Sbjct: 221 SAALERLAACAARLGR----------------ADEERSLLQRLVDDYPGTPAAQRAGGRL 264 >gi|330507774|ref|YP_004384202.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6] gi|328928582|gb|AEB68384.1| TPR-repeat protein [Methanosaeta concilii GP-6] Length = 432 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 41/110 (37%), Gaps = 6/110 (5%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 V ++G ++ + D ++ Y K + + +A + +Q P Sbjct: 207 TVLGILGKYDEAIKPFDQAISIDPQFAEAWYNKGTALGRLGKYDEAIKACDQAISIDP-- 264 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 +A + Y GKY +A ++ I+ P+ + +Y G++ Sbjct: 265 QLAETWTIKGI-ALYDLGKYDEAIQAYDQAISINPQ---IAEAWYNKGVA 310 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 14/117 (11%), Positives = 36/117 (30%), Gaps = 20/117 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 K + +A + ++Q + + + K + A GKY +A + + Sbjct: 68 NKGEALRALGRYDEAIQAYDQAISIDPQYAY-AWSNKGEALRA-----LGKYDEAINACD 121 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + I+ P+ + + + G + D + + + Y Sbjct: 122 QAISINPQD---AFAWTIKGNALY--------DLGKYDEAINAYDQAISIDPQYAYA 167 >gi|322706857|gb|EFY98436.1| mitochondrial outer membrane 72K protein [Metarhizium anisopliae ARSEF 23] Length = 622 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 47/141 (33%), Gaps = 20/141 (14%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDF 87 ++ +G ++ + D Y +A + + ++A + + + +DF Sbjct: 377 SISLELGEPDKADAEFAKALEQDKDDPDVYYHRAQASFIKGDLAEAQKDYQKSIDLDKDF 436 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 F+ + QY G + + I +P+ +V Y YY + Sbjct: 437 IFSH------IQLGVTQYKMGSIASSMATFRRCIKNFPKVPDV-YNYY----------GE 479 Query: 148 VPYDQRATKLMLQYMSRIVER 168 + DQ ++ +E Sbjct: 480 LLLDQSNFSEAVEKFDTAMEM 500 >gi|260772529|ref|ZP_05881445.1| TPR repeat-containing protein [Vibrio metschnikovii CIP 69.14] gi|260611668|gb|EEX36871.1| TPR repeat-containing protein [Vibrio metschnikovii CIP 69.14] Length = 259 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 53/147 (36%), Gaps = 12/147 (8%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 + ++ L + + ++ Y+ AV LK+++++ A F + D+P + A + Sbjct: 123 AANQNDELPLGTFSSDVNEQAAYQNAVDLILKKRDYAGAIAAFEKFQADYPDSSFAANAH 182 Query: 98 LMSAFVQY-SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + + Q A S + Y +S +G D+ Sbjct: 183 YWLGQLHFAKRQDQQSAKSFAA--VLSYSDSNKRADALVKLG--------DIAARNNNAA 232 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVT 183 +Y +++ Y NS K A+ + Sbjct: 233 QAKKYYQQVINEYPNSASAKAAQDKLK 259 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 23/124 (18%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A + E++ YP+S +Y +G + + DQ++ K +S Sbjct: 154 KKRDYAGAIAAFEKFQADYPDSSFAANAHYWLGQLHFAKRQ----DQQSAKSFAAVLS-- 207 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 Y++S A + + + +Y +Q V+ Y ++ Sbjct: 208 ---YSDSNKRADALVKLGDIAARNNNA--------AQAKKY------YQQVINEYPNSAS 250 Query: 226 AEEA 229 A+ A Sbjct: 251 AKAA 254 >gi|242278388|ref|YP_002990517.1| peptidase M48 Ste24p [Desulfovibrio salexigens DSM 2638] gi|242121282|gb|ACS78978.1| peptidase M48 Ste24p [Desulfovibrio salexigens DSM 2638] Length = 440 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 62/151 (41%), Gaps = 17/151 (11%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S+ ++ E +K ++++++++A E+F++ R P A LL+ + Q + GK Sbjct: 281 SIRKIKPAIEEMQKGEGAMRKKSYNEAEEHFSKALRIAP-NDYA--GLLLMSKCQLAQGK 337 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 ++ ++ +YP+ +L GM + + R K L +R Sbjct: 338 AKEGLHYAQQAKNRYPQE---AQALHLTGM--------LSLENRQFKQALSNFDAYEKRL 386 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 +P FY V L +E+ YY Sbjct: 387 PGNP---MTTFYKGVSYEALGNREMAANEYY 414 >gi|203284442|ref|YP_002222182.1| TPR domain protein [Borrelia duttonii Ly] gi|201083885|gb|ACH93476.1| TPR domain protein [Borrelia duttonii Ly] Length = 223 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 26/67 (38%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + + + A ++F + K +++A Y +Y +A E + Sbjct: 109 GEAYFFQGQYKNALKHFQKYIGLDANGARIAKVYILTADSFYKLERYNEADFAYENALRF 168 Query: 124 YPESKNV 130 +P ++N+ Sbjct: 169 FPNNQNI 175 >gi|282897165|ref|ZP_06305167.1| TPR repeat protein [Raphidiopsis brookii D9] gi|281197817|gb|EFA72711.1| TPR repeat protein [Raphidiopsis brookii D9] Length = 231 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 45/126 (35%), Gaps = 9/126 (7%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVY-LDSVTDVRYQREVYEKAVLFLKEQNFSK 75 Y+ F L + + S+ L + R R++ E+ + ++S Sbjct: 3 YKQRSFFLATLILGGILSISPLMTTQSQAAESLLAQAGNRKLRDLLEQGRRLVDLGDYSG 62 Query: 76 AYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A + ++ P + + + ++ G + Q+ S + I+ P + + Y Sbjct: 63 AIAVYQDAAKLAP-----KNAKIYSGIGYLYAQQGNFSQSLSAYRQAISINPNNSDFYYA 117 Query: 134 Y-YLVG 138 Y+ G Sbjct: 118 VGYIKG 123 >gi|241953747|ref|XP_002419595.1| general transcriptional co-repressor, putative [Candida dubliniensis CD36] gi|223642935|emb|CAX43190.1| general transcriptional co-repressor, putative [Candida dubliniensis CD36] Length = 1076 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 39/137 (28%), Gaps = 25/137 (18%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109 D Y + + +F+ AYE F Q P + Y + Sbjct: 370 DQSDAHSWYYLGRVEMIRGDFTAAYEAFQQAVNRDARNP-TFWC-----SIGVLYYQISQ 423 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIV 166 Y+ A I P + V+Y +G Y I D L + Sbjct: 424 YRDALDAYTRAIRLNP---YISEVWYDLGTLYETCNNQISD----------ALDAYRQAE 470 Query: 167 ERYTNSPYVKGARFYVT 183 N+P++K + Sbjct: 471 RLDPNNPHIKARLEQLI 487 >gi|120554731|ref|YP_959082.1| TPR repeat-containing protein [Marinobacter aquaeolei VT8] gi|120324580|gb|ABM18895.1| Tetratricopeptide TPR_2 repeat protein [Marinobacter aquaeolei VT8] Length = 952 Score = 40.5 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 53/166 (31%), Gaps = 23/166 (13%) Query: 108 GKYQQAASLGEEYITQYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 +Y A + E YI +P S Y + ++I + T+ + + + V Sbjct: 307 EQYGDAIDVFEAYIEDHPASPWAPRY--------HIRIIDTLEL-AGFTRTVPERKADFV 357 Query: 167 ERYT-NSPYVKGA--------RFYVTVGRNQLAAKEVEIG----RYYLKRGEYVAAIPRF 213 Y S Y + A + +LA ++ + Y A + Sbjct: 358 SLYGIYSDYWQSAGPDAMGFIEQQLEQLLPELADRQYLLAGESSDQQQADDHYRKAASYY 417 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 A + D E + L E Y+ L EA + YPQ Sbjct: 418 AEFAATFPDHPRTPERLFLLGETYLELEDWAEAIAAFERVAYDYPQ 463 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 8/74 (10%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 + A + +++YPE + D +YY + ++ AT L + +V Sbjct: 110 DELAGAIEAYQRLLSEYPEREGNDKIYYQLARAWELR--------GATPQQLDTLDTLVR 161 Query: 168 RYTNSPYVKGARFY 181 RY +S Y A+F Sbjct: 162 RYPDSDYWIEAQFR 175 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 26/190 (13%), Positives = 58/190 (30%), Gaps = 26/190 (13%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE---SKN 129 + KA Y+ + + FP + L + + +A + E YP+ S Sbjct: 410 YRKAASYYAEFAATFPDHPRTPERLFLLGETYLELEDWAEAIAAFERVAYDYPQDTVSGR 469 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER-----YTNSPYVKGARFYVTV 184 Y +++ + + + Q + ++ + P A +Y+ + Sbjct: 470 AAEAGYASVLAFREYSITWNSLPISEQAAYQELQQLNRLRFANAFPEDPRAP-AVYYIAL 528 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE---EAMARLVEAYVALA 241 E + R + + ++ + AE EA+ + LA Sbjct: 529 ------QHEFD-------RNNWEETVNMAARLV-TWQPTPSAELTTEALLLSGHSLSELA 574 Query: 242 LMDEAREVVS 251 EA + Sbjct: 575 RYSEAEQAYR 584 >gi|297823015|ref|XP_002879390.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata] gi|297325229|gb|EFH55649.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata] Length = 800 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 51/158 (32%), Gaps = 17/158 (10%) Query: 14 AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73 WAY L + + + S+ +V + R+ + T R + + + Sbjct: 301 QWAYLLPQIYVNLGISLEGEGMVLSACEYYREAAILCPTHYRALKLL---GSALFGVGEY 357 Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A + + A + A ++ G+ ++A + + I P + Sbjct: 358 RAAVKALE--EAIYLKPDYA-DAHCDLASSLHAMGEDERAIEVFQRAIDLKPGHVD---A 411 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 Y +G Y D + + +R++ + N Sbjct: 412 LYNLGGLYM--------DLGRFQRASEMYTRVLAVWPN 441 >gi|198420281|ref|XP_002129495.1| PREDICTED: similar to intraflagellar transport 88 homolog (Chlamydomonas) isoform 2 [Ciona intestinalis] Length = 821 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 72/269 (26%), Gaps = 58/269 (21%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGV 92 FL G + R D + KA +E + A + D + Sbjct: 471 FLQGNAENAKRYADAAVKADRFNATSLTNKANCLYREGDAEGAVTLYKEALEND---SSC 527 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-- 150 +L V S G+ + + ++ + +N V + + S +M+ D Sbjct: 528 HE-ALYNLGLVNKSLGRLDDSL---DSFMKLHNIVRNSAQVMFQIA-SLYEMMEDGTQAM 582 Query: 151 ---------------------------DQRATKLMLQYMSRIVERYT------------- 170 D Y + Sbjct: 583 EWLMQCVGIVPTDASVMSRMADICENEDNGDRTQAFAYRMDSYRLFPADIDTVEWLGGYY 642 Query: 171 -NSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 S + + A V + ++ + Y + G Y A +++ + + D Sbjct: 643 VESQFSEKAIKYFERAAVIQPNEVKWQLMVASCYRRSGNYQGAFEKYKQIHGKFPD---N 699 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQE 255 E + L L L E +E + +++ Sbjct: 700 IECLKYLNRLCSDLGLNKELQEFANKLRK 728 >gi|254453281|ref|ZP_05066718.1| tetratricopeptide repeat domain protein [Octadecabacter antarcticus 238] gi|198267687|gb|EDY91957.1| tetratricopeptide repeat domain protein [Octadecabacter antarcticus 238] Length = 562 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 38/97 (39%), Gaps = 9/97 (9%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 ++ N + A + D P+ A + L +Q + G Y AA+ + +PE Sbjct: 94 QDGNGATAIALLEKLKSDAPYGSGYFAFRLNLNIGVIQQNIGDYPSAAASLKAAHEFFPE 153 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 +++A+++ DQ A + + ++ Sbjct: 154 HHKA-----QTALAFAELLDG--KDQAALERTTELLN 183 >gi|113478133|ref|YP_724194.1| sulfotransferase [Trichodesmium erythraeum IMS101] gi|110169181|gb|ABG53721.1| sulfotransferase [Trichodesmium erythraeum IMS101] Length = 682 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 69/205 (33%), Gaps = 34/205 (16%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 YE FL++Q + KA + Q + P K+ +A + ++ Sbjct: 3 YYELGEKFLEQQQWEKAVTSYRQAIKLNPTFSWH---YYKLGQALTQLQKWDEAITNYQK 59 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I + + + Y+ +G + + Q + + ++ NS Sbjct: 60 AIEL---NSDFPWSYHHLGNALLK--------QEKWEEAVNAYHNFIKL--NSD------ 100 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 N A ++ + K GE+ AAI +Q + + + + +A ++ Sbjct: 101 -------NYWAYHKLGEALF--KIGEFDAAIISYQKAIKINPEIKGTHQKLADIL---FH 148 Query: 240 LALMDEAREVVSLIQERYPQGYWAR 264 + ++ A + P+ W R Sbjct: 149 IGQLEAAEIAYRKAIKLNPEVVWYR 173 >gi|307247717|ref|ZP_07529755.1| hypothetical protein appser2_7080 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306855747|gb|EFM87912.1| hypothetical protein appser2_7080 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 391 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LD+ D ++++ K A F+ + +A Y+ + A SL V Sbjct: 96 LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 152 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++++A ++ E+ I P++ + +Y YAQ I++ D L +S+ Sbjct: 153 QKTKEWKKAVNVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 205 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +E A + +G YYL + ++ +A+ ++ +L D Sbjct: 206 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYERILQQDPD-- 246 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256 E + ++ Y +A D A + LI+ Sbjct: 247 FISEVIEKIKACY--MAENDLANYELFLIRAN 276 >gi|198420279|ref|XP_002129474.1| PREDICTED: similar to intraflagellar transport 88 homolog (Chlamydomonas) isoform 1 [Ciona intestinalis] Length = 833 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 72/269 (26%), Gaps = 58/269 (21%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGV 92 FL G + R D + KA +E + A + D + Sbjct: 471 FLQGNAENAKRYADAAVKADRFNATSLTNKANCLYREGDAEGAVTLYKEALEND---SSC 527 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-- 150 +L V S G+ + + ++ + +N V + + S +M+ D Sbjct: 528 HE-ALYNLGLVNKSLGRLDDSL---DSFMKLHNIVRNSAQVMFQIA-SLYEMMEDGTQAM 582 Query: 151 ---------------------------DQRATKLMLQYMSRIVERYT------------- 170 D Y + Sbjct: 583 EWLMQCVGIVPTDASVMSRMADICENEDNGDRTQAFAYRMDSYRLFPADIDTVEWLGGYY 642 Query: 171 -NSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 S + + A V + ++ + Y + G Y A +++ + + D Sbjct: 643 VESQFSEKAIKYFERAAVIQPNEVKWQLMVASCYRRSGNYQGAFEKYKQIHGKFPD---N 699 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQE 255 E + L L L E +E + +++ Sbjct: 700 IECLKYLNRLCSDLGLNKELQEFANKLRK 728 >gi|86608982|ref|YP_477744.1| TPR repeat-containing protein kinase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557524|gb|ABD02481.1| tetratricopeptide repeat/protein kinase domain protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 1270 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 42/118 (35%), Gaps = 14/118 (11%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E+A L + + +A +++ R P + L G + A + Sbjct: 832 ERAELCRQLGRWPEAIADYDEVLRQDPQ-DWT--AWLGRGMAHGQVGNWDSAIQDLSRVL 888 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 Q P+ + + G + Q+ T+ LQ ++R+++R + AR Sbjct: 889 QQDPDHRE---ALWHRGQALQQL--------GQTEAALQDLNRLLQRDPQHRMARLAR 935 Score = 39.7 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 61/200 (30%), Gaps = 38/200 (19%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ K + + A + Q + ++ +Y Y+ A + + + Sbjct: 334 QRGSARYKSGDLAGAIADYTQVIQLA--GD--ARAYFNRGIARYRLEDYEGAVADYTQAL 389 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P+ YY G +Y Q+ + + ++ SR +E R Y Sbjct: 390 GLNPQ---WAVAYYNRGNAYRQLNQQ--------QQAIEDYSRAIELNPE-----DVRAY 433 Query: 182 VT--VGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYSDAEHA 226 V R L + + Y RG + Q + +Y+ A Sbjct: 434 FNRGVVRGHLGDAQGAAADFSEVIKRDPQDGEAYFNRGVARVQLSDLQGAVEDYTQALQL 493 Query: 227 EEAMARLVEAYVALALMDEA 246 + R +AY L +A Sbjct: 494 D---PRHGKAYYHRGLARQA 510 Score = 35.1 bits (80), Expect = 9.8, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 51/181 (28%), Gaps = 51/181 (28%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVAR-------KSLL--MSAFVQYSA--GKYQQAASLGE 118 ++ F A E PF A + L+ + A Q A G +Q A + Sbjct: 260 QERFQSAAEVLEALRPLLPFPQEATLGDVSVDQVLVTRLLARAQEKARQGDFQGAIADCT 319 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQ------MIRDVPYDQRATKLMLQYMSRIVERYTNS 172 I P++ Y G + + I D + Y +R + RY Sbjct: 320 LAIQLDPQNSR---AYSQRGSARYKSGDLAGAIADYTQVIQLAGDARAYFNRGIARY--- 373 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLAN 219 +L E + Y Y RG + + Q + + Sbjct: 374 ---------------RLEDYEGAVADYTQALGLNPQWAVAYYNRGNAYRQLNQQQQAIED 418 Query: 220 Y 220 Y Sbjct: 419 Y 419 >gi|303252344|ref|ZP_07338510.1| hypothetical protein APP2_1320 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302648803|gb|EFL78993.1| hypothetical protein APP2_1320 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 398 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 34/212 (16%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LD+ D ++++ K A F+ + +A Y+ + A SL V Sbjct: 103 LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 159 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++++A ++ E+ I P++ + +Y YAQ I++ D L +S+ Sbjct: 160 QKTKEWKKAVNVAEKLIKIEPDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 212 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +E A + +G YYL + ++ +A+ ++ +L D Sbjct: 213 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYERILQQDPD-- 253 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256 E + ++ Y +A D A + LI+ Sbjct: 254 FISEVIEKIKACY--MAENDLANYELFLIRAN 283 >gi|300897293|ref|ZP_07115729.1| tetratricopeptide repeat protein [Escherichia coli MS 198-1] gi|300358941|gb|EFJ74811.1| tetratricopeptide repeat protein [Escherichia coli MS 198-1] Length = 744 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 79/238 (33%), Gaps = 40/238 (16%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--RKS 96 +S+ +D + + ++A + +++A Q P + R S Sbjct: 30 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWTQAAALQRQRLALDPGSVWITYRLS 89 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRD 147 + AG+ QA +L Q P Y Y YL G +++ I Sbjct: 90 Q-DL----WQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHGQDRAALAH---INS 141 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVE 195 +P Q + + +V R S V + G+ A ++ Sbjct: 142 LPRAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLT 195 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 196 LADWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 250 >gi|198282456|ref|YP_002218777.1| putative lipoprotein-like protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666270|ref|YP_002424653.1| lipoprotein, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|198246977|gb|ACH82570.1| Putative lipoprotein-like protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518483|gb|ACK79069.1| lipoprotein, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 612 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 45/153 (29%), Gaps = 24/153 (15%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF- 80 L + ++ C + + S + T Q + E+A + ++ +A + + Sbjct: 15 MTLALATGLSACASMPHKAPPSSNPPPVETTTAVSQTPLAERADQLMITGHYQEAAKDYI 74 Query: 81 ---NQCSRDFPFAGVARKSLLM----SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 + L +A K Q A L E + + N Sbjct: 75 HAAAAVRGR---------AQLDYLMKAAQASLKGQKPQVAILLANEVLRL--QHDNAS-- 121 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 L G + + + DQ T + I+ Sbjct: 122 --LRGAALWVRAQGLM-DQGQTPSAKGNLEEIL 151 >gi|149631897|ref|XP_001506546.1| PREDICTED: similar to KIAA0155 isoform 1 [Ornithorhynchus anatinus] Length = 1163 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 99/273 (36%), Gaps = 33/273 (12%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 A L RA E + ++T +++A + E + +Y + + + + Y Sbjct: 476 ASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYL 535 Query: 63 K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + + NF +A ++F + ++D P + L A ++ E Sbjct: 536 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 589 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSPY 174 + Q P ++N Y +G + Q + D+ R L +++ + Y Sbjct: 590 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLY 648 Query: 175 VKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVL 217 + Y R+ A +E + + Y+++ +Y++A+ ++ L Sbjct: 649 AANGIGAVLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCL 708 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 + ++ E + L A + E ++ + Sbjct: 709 RKFYKHQNTEVVLY-LARALFKCGKLQECKQTL 740 >gi|71401955|ref|XP_803945.1| mitochondrial import receptor subunit [Trypanosoma cruzi strain CL Brener] gi|70866644|gb|EAN82094.1| mitochondrial import receptor subunit, putative [Trypanosoma cruzi] Length = 403 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 12/96 (12%) Query: 50 SVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYS 106 SV + E Y + +K+ N KA +++ + P + + ++ M Sbjct: 100 SVPQKTEKAEEYRARGNDAMKQGNLRKAVRCYSEALKYEPSSSTLWSNRAAAMI-----Q 154 Query: 107 AGKYQQAASLGEEYITQYPESKNVDY----VYYLVG 138 + A S + I+ P + Y YL+G Sbjct: 155 LDRGDDALSDAKRAISLDPMNVKAYYRKASALYLLG 190 >gi|322823269|gb|EFZ29059.1| hypothetical protein TCSYLVIO_4700 [Trypanosoma cruzi] Length = 703 Score = 40.5 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 25/189 (13%), Positives = 53/189 (28%), Gaps = 41/189 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + + K+ ++ +A + ++ R P K+L F Y A E + Sbjct: 270 QRGLAYRKKGDYLRAIDEYSAALRLDPNNF---KALFNRGFCSDKVEDYNAAIRDYEAAM 326 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P Y Y +Y + K + + + N+ Sbjct: 327 KLEPG-----YAY-----TYYNLGISYDRWGGHYKEAIAMFDKAIALDGNN--------- 367 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAY 237 +Y RG + +++ + +Y+ A +A Y Sbjct: 368 ---------------ADFYHNRGFSQRKLGKYREAVKDYTMALSLDPQHFKAYYNRAFCY 412 Query: 238 VALALMDEA 246 L A Sbjct: 413 DKLGEGANA 421 >gi|300870192|ref|YP_003785063.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] gi|300687891|gb|ADK30562.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] Length = 600 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 72/199 (36%), Gaps = 29/199 (14%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 +E ++ KA +Y+ + S+ + A +++ + A Y K +A ++ I K Sbjct: 278 EENDYDKAIKYYYRLSKIKNYTN-AYEAIGLLANAYYKGSKLDEAEDNYKKIIML---DK 333 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-----------YVKG 177 D Y + + + D+ Y Q++ L+Y I TN+ Y Sbjct: 334 KDD--LYKTAL---ERLGDITYRQKSFTASLKYYKEIYTIETNNAIFKPRLGELELYYGN 388 Query: 178 ARFYVTVGRNQLAAK------EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 + + + N + + YY G Y A+ + L+ Y + E++ Sbjct: 389 SDRGIKLLENSIKESIGNAFPSRTLAIYYESIGNYNEALNYYNYTLSKYPN---DRESLY 445 Query: 232 RLVEAYVALALMDEAREVV 250 R Y +A E + Sbjct: 446 RAGMLYYRNREYKKANESL 464 >gi|262276101|ref|ZP_06053910.1| TPR repeat-containing protein [Grimontia hollisae CIP 101886] gi|262219909|gb|EEY71225.1| TPR repeat-containing protein [Grimontia hollisae CIP 101886] Length = 244 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 50/147 (34%), Gaps = 16/147 (10%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 R+ S + + + Y+ AV LK++N++ A + FN +P + + Sbjct: 108 REPDGKSSEASYSTNQSENAEYDAAVNLILKKKNYAGAVDAFNAFLTKYPESIYKPNAHY 167 Query: 99 MSAFVQYSAGKYQQAA---SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + +S + A + ++ SK D +G+ + Sbjct: 168 WLGQLYFSKSQLDDAKKNFTAVSQFAK---SSKRAD-ALLKLGIIAERQSDGAS------ 217 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYV 182 ++V+ Y + K A+ + Sbjct: 218 --AKALFEQVVKEYPGTTTAKQAQKQL 242 Score = 35.9 bits (82), Expect = 6.4, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 38/124 (30%), Gaps = 23/124 (18%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A ++T+YPES +Y +G Y + K +S+ Sbjct: 138 KKKNYAGAVDAFNAFLTKYPESIYKPNAHYWLGQLYFSKSQLDD-----AKKNFTAVSQF 192 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 + S A + + + + +A F+ V+ Y Sbjct: 193 AK----SSKRADALLKLGIIAERQSDG--------------ASAKALFEQVVKEYPGTTT 234 Query: 226 AEEA 229 A++A Sbjct: 235 AKQA 238 >gi|260777337|ref|ZP_05886231.1| TPR domain protein in aerotolerance operon [Vibrio coralliilyticus ATCC BAA-450] gi|260607003|gb|EEX33277.1| TPR domain protein in aerotolerance operon [Vibrio coralliilyticus ATCC BAA-450] Length = 616 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 40/118 (33%), Gaps = 9/118 (7%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + L +A L +S + + Y E Y++A + + + Sbjct: 318 FRRGFLFSMIILAYPLLSPKPAMASAWLNSNQQAKQLYDAEQYQEAADLFENKEWQG-IA 376 Query: 79 YFNQCSRDFPFAGVARK------SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + +FP A A K A ++ QA SL E+ + Q P +++ Sbjct: 377 QYQA--GNFPAAINALKDSQTLNGKYNLANAYAQNREFDQAISLYEDVLKQDPSNEDA 432 >gi|223937044|ref|ZP_03628952.1| TPR repeat-containing protein [bacterium Ellin514] gi|223894325|gb|EEF60778.1| TPR repeat-containing protein [bacterium Ellin514] Length = 466 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 65/231 (28%), Gaps = 43/231 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + + ++++ KA ++Q + P + + A+ G +A E Sbjct: 167 SRGRAYAMKRDWDKAIADYDQVVKLNPKQVSAYNSRG---LAYA--MKGDMDKAIRDLSE 221 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT------NSP 173 I P K+ Y G+SYA + S +++ +S Sbjct: 222 VIKLNP--KDAP-AYGSRGLSYAMK--------GDWDKAVSDFSELIKLKPTDSIGYDSR 270 Query: 174 YVKGARFYVTVGRNQLAAKEVEI-------------GRYYLKRGEYVAAIPRFQLVLANY 220 A LA I G Y+ +G++ AI + + Sbjct: 271 --ATAYQNQGKLDEALADFSEAIKLNDKDAGAFHNRGLIYVGKGDWEKAI---ENFSKSI 325 Query: 221 SDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270 +A A+ AY + ++ ++ + Sbjct: 326 QLNPQDADAFAKRGYAYYQKGEYQKGIDDINEALRLNPKDAESYNNLAWFR 376 Score = 35.9 bits (82), Expect = 6.0, Method: Composition-based stats. Identities = 28/217 (12%), Positives = 61/217 (28%), Gaps = 42/217 (19%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + ++ ++ A ++ + P + G + +E Sbjct: 31 FTIGKKAQEDGDYELAISCWSSVLKLQPTND---AAFFNRGMAYTQKGDFTSGIHDFDET 87 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR-ATKLMLQYMSRIVERYT--------- 170 I PE G +Y R YDQ+ + + + ++ Sbjct: 88 IRLNPE-----------GRAYDN--RGNLYDQKGEVEKAISDYTEAIKLNPKDAWAYAKR 134 Query: 171 --------NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 +S + A GR Y + ++ AI + V+ Sbjct: 135 AADYHKKGDSEKAISDYTQAIQINPKDANYYDSRGRAYAMKRDWDKAIADYDQVVKLNPK 194 Query: 223 --AEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256 + + + AY MD+A R++ +I+ Sbjct: 195 QVSAYNSRGL-----AYAMKGDMDKAIRDLSEVIKLN 226 >gi|115378273|ref|ZP_01465441.1| hypothetical adventurous gliding motility protein U [Stigmatella aurantiaca DW4/3-1] gi|310821097|ref|YP_003953455.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115364715|gb|EAU63782.1| hypothetical adventurous gliding motility protein U [Stigmatella aurantiaca DW4/3-1] gi|309394169|gb|ADO71628.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 1209 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 78/210 (37%), Gaps = 20/210 (9%) Query: 45 DVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 D Y + + ++ Y+ AV+ +F A F + +P +R + ++ FV Sbjct: 615 DTYNSLYPNNPDEIDLRYQAAVILYDRNHFVDAARRFGEIITKYPEERRSRDAADLTMFV 674 Query: 104 QYSAGKYQQAASLGEEYITQY----PESKNVDYVYYLVGMSYAQMIRDVP-YDQRATKLM 158 S ++Q+ +L +++ P ++ V +V S + + ++ ++ K Sbjct: 675 LESREEWQELNTLSRQFLGNKKLSKPGTEFAARVAKVVEGSQYKWVDEIVYRKEQNPKKA 734 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + V + S A Y + + A L RG V A R VL Sbjct: 735 GELFLSFVTEFPKSENADRALTYAMIIFQEAAE---------LDRG--VEAGTR---VLN 780 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEARE 248 Y D+ + + + Y +A +A E Sbjct: 781 EYPDSIFSLKVRYTMAGFYEKMAEFQKAAE 810 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 72/245 (29%), Gaps = 36/245 (14%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 D+ D ++ + + +A + + Q RDFP + + + Sbjct: 193 EDLLRDYPKYEHMDEVLFAQGYNLNELNRGPEAVKRYQQLIRDFPQSQFVPDAYIQLGNY 252 Query: 104 QYSAGKYQQAASLGE-----EYITQYPESKNVDYVYYLVGMSYAQM---IRDVPYDQRAT 155 + K A E Y Y Y + + Q A Sbjct: 253 FFENNKLAPARENYEKARDTRVPKIY------AYAIYKLAWCDFNSGGYEDGLKKLQEAV 306 Query: 156 KLML-----------QYMSRIVERYTNSPYVKGARFYVTV---GRNQ---LAAKEVEIGR 198 + + ++ + Y K A Y + Q +A V + Sbjct: 307 EFAETQGEELGDLKTEALNDLTVFYVQLDQPKEALAYFKAKAPAKRQGRLIAKTAVGLAD 366 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY- 257 G + +AI F+ ++ + +A E +V +Y L + R + + + Y Sbjct: 367 ----AGHFDSAILMFRTLVDDAPMGPNAPEYQQAIVRSYEGLRQRTQVRTEMKRMVDLYR 422 Query: 258 PQGYW 262 P G W Sbjct: 423 PGGTW 427 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 50/140 (35%), Gaps = 22/140 (15%) Query: 58 REVY---EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-QQA 113 E+Y K + L+ F A + F+ + +Y + Sbjct: 136 SELYWEKSKYLYRLEMDRFLAAEKAFDAAEAR---GEKVEAPQQD----HRDSERYRAET 188 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 SL E+ + YP+ +++D V + G + ++ R ++ +++ + S Sbjct: 189 MSLYEDLLRDYPKYEHMDEVLFAQGYNLNELNRGP--------EAVKRYQQLIRDFPQSQ 240 Query: 174 YVKGARFYV---TVGRNQLA 190 +V A + N+LA Sbjct: 241 FVPDAYIQLGNYFFENNKLA 260 >gi|75907401|ref|YP_321697.1| hypothetical protein Ava_1178 [Anabaena variabilis ATCC 29413] gi|75701126|gb|ABA20802.1| TPR repeat protein [Anabaena variabilis ATCC 29413] Length = 280 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 22/176 (12%), Positives = 51/176 (28%), Gaps = 37/176 (21%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSV---------TDVRYQREVYEKAVLFLKEQ 71 K LTI A+ + ++++V + + T+ + Y + + Sbjct: 14 KRVLTIGVLTALSAITSVSCSNNKEVLVTEIGVNPPSRRTTNNSQAGQFYVQGQRQHAQG 73 Query: 72 NFSKAYEYFNQCSRDFP-FAGVARKSLLMSAF-----VQYSAGKYQQAASLGEEYITQYP 125 + A +++ P + A+ + G Q+A + E I Sbjct: 74 DSQGAIASYDKAIGLDPDYGA---------AYRGRGLAYFDLGDKQKAIADYNEAIRL-- 122 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 S N + G + A + + + + + N Y + Sbjct: 123 -SPNDAEAFNSRGNARASLGDNAG--------AITDYNEAIRLSPN--YAEAYNNR 167 >gi|15225686|ref|NP_180804.1| calcium-binding EF hand family protein [Arabidopsis thaliana] gi|75160474|sp|Q8S8L9|Y2245_ARATH RecName: Full=Uncharacterized TPR repeat-containing protein At2g32450 gi|20197430|gb|AAM15073.1| putative O-GlcNAc transferase [Arabidopsis thaliana] gi|28393656|gb|AAO42246.1| putative O-GlcNAc transferase [Arabidopsis thaliana] gi|28973559|gb|AAO64104.1| putative O-GlcNAc transferase [Arabidopsis thaliana] gi|330253593|gb|AEC08687.1| Calcium-binding tetratricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 802 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 51/158 (32%), Gaps = 17/158 (10%) Query: 14 AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73 WAY L + + + S+ +V + R+ + T R + + + Sbjct: 299 QWAYLLPQIYVNLGISLEGEGMVLSACEYYREAAILCPTHYRALKLL---GSALFGVGEY 355 Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A + + A + A ++ G+ ++A + + I P + Sbjct: 356 RAAVKALE--EAIYLKPDYA-DAHCDLASSLHAMGEDERAIEVFQRAIDLKPGHVD---A 409 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 Y +G Y D + + +R++ + N Sbjct: 410 LYNLGGLYM--------DLGRFQRASEMYTRVLAVWPN 439 >gi|259149343|emb|CAY86147.1| Ctr9p [Saccharomyces cerevisiae EC1118] gi|323346661|gb|EGA80945.1| Ctr9p [Saccharomyces cerevisiae Lalvin QA23] Length = 1077 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 52/156 (33%), Gaps = 33/156 (21%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARK------------------------------SLL 98 + ++ KA + + + + PF A + L Sbjct: 676 SKHSYLKAIQLYQKILQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNEDVQL 735 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRAT 155 A +Y +A E + ++ K ++ L+G ++ R V + Q+A Sbjct: 736 NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQKAL 795 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 + + V+ + S ++ +F + + Q+A Sbjct: 796 ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAE 831 >gi|209525653|ref|ZP_03274190.1| sulfotransferase [Arthrospira maxima CS-328] gi|209493822|gb|EDZ94140.1| sulfotransferase [Arthrospira maxima CS-328] Length = 729 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 37/127 (29%), Gaps = 17/127 (13%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y + L + +S+A E FNQ P + + + G+ QA + Sbjct: 294 YYGLGLALLNLRQWSEAIEVFNQAINLNPDCFWSYN---NLGYCLFKQGEIPQAIDAYRK 350 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I + VY +G D Q+ + ++ + A Sbjct: 351 AIAI---DPEIPEVYIRLG--------DTLLQQQDIDGAIAAYLDAIKAQPDGE---IAY 396 Query: 180 FYVTVGR 186 + R Sbjct: 397 IKLRHLR 403 >gi|151945491|gb|EDN63732.1| cln three (cln3) requiring protein [Saccharomyces cerevisiae YJM789] gi|190407208|gb|EDV10475.1| CTR9 protein [Saccharomyces cerevisiae RM11-1a] gi|207341482|gb|EDZ69529.1| YOL145Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256270134|gb|EEU05364.1| Ctr9p [Saccharomyces cerevisiae JAY291] Length = 1077 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 52/156 (33%), Gaps = 33/156 (21%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARK------------------------------SLL 98 + ++ KA + + + + PF A + L Sbjct: 676 SKHSYLKAIQLYQKILQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNEDVQL 735 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRAT 155 A +Y +A E + ++ K ++ L+G ++ R V + Q+A Sbjct: 736 NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQKAL 795 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 + + V+ + S ++ +F + + Q+A Sbjct: 796 ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAE 831 >gi|126657057|ref|ZP_01728228.1| Tetratricopeptide TPR_4 [Cyanothece sp. CCY0110] gi|126621600|gb|EAZ92310.1| Tetratricopeptide TPR_4 [Cyanothece sp. CCY0110] Length = 543 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 47/137 (34%), Gaps = 32/137 (23%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + N++ A E F+ PF Y ++QA +++ Sbjct: 366 QQGRWLFERGNYADAAERFDN-----PF--W-------KGIAYYINKDFEQAT---QQFS 408 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P++ + Y+ +G +YAQ Q K L+ R + S Y Sbjct: 409 EIKPKTPEI---YFNLGNAYAQ--------QEDYKNALKNYDRALGM--RSDYADAQNNR 455 Query: 182 VTVGRNQLAAKEVEIGR 198 +L KE E+ + Sbjct: 456 --DLVQKLLEKEEELAK 470 >gi|85110209|ref|XP_963316.1| hypothetical protein NCU06842 [Neurospora crassa OR74A] gi|28881189|emb|CAD70370.1| related to TPR-containing protein Mql1 [Neurospora crassa] gi|28924992|gb|EAA34080.1| conserved hypothetical protein [Neurospora crassa OR74A] gi|49618689|gb|AAT67994.1| RCM-1 [Neurospora crassa] Length = 917 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 46/146 (31%), Gaps = 28/146 (19%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSA 107 D + Y +++ Q + KAYE + Q P + Y Sbjct: 288 AADQTDAQSWYLLGRCYMQLQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQI 341 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSR 164 +Y+ A I P + V+Y +G Y I D L R Sbjct: 342 NQYRDALDAYSRAIRLNP---FISEVWYDLGTLYESCNNQISD----------ALDAYQR 388 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLA 190 E N+P++ + + + R+ A Sbjct: 389 AAELDPNNPHI---KTRLQLLRSGQA 411 >gi|323352275|gb|EGA84810.1| Ctr9p [Saccharomyces cerevisiae VL3] Length = 1040 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 52/156 (33%), Gaps = 33/156 (21%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARK------------------------------SLL 98 + ++ KA + + + + PF A + L Sbjct: 676 SKHSYLKAIQLYQKILQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNEDVQL 735 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRAT 155 A +Y +A E + ++ K ++ L+G ++ R V + Q+A Sbjct: 736 NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQKAL 795 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 + + V+ + S ++ +F + + Q+A Sbjct: 796 ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAE 831 >gi|323492743|ref|ZP_08097887.1| hypothetical protein VIBR0546_00695 [Vibrio brasiliensis LMG 20546] gi|323313118|gb|EGA66238.1| hypothetical protein VIBR0546_00695 [Vibrio brasiliensis LMG 20546] Length = 389 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A L+L +QNF +A +++ Q + P A L A Y ++ + + Y+ Sbjct: 106 ADLYLNQQNFEQAIKHYYQLIKTAPETQSADDIWLRIAQAHYQIEQWSKVIPATDRYLKL 165 >gi|323307343|gb|EGA60622.1| Ctr9p [Saccharomyces cerevisiae FostersO] Length = 1040 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 52/156 (33%), Gaps = 33/156 (21%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARK------------------------------SLL 98 + ++ KA + + + + PF A + L Sbjct: 676 SKHSYLKAIQLYQKILQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNEDVQL 735 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRAT 155 A +Y +A E + ++ K ++ L+G ++ R V + Q+A Sbjct: 736 NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQKAL 795 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 + + V+ + S ++ +F + + Q+A Sbjct: 796 ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAE 831 >gi|300727141|ref|ZP_07060560.1| putative BatD protein [Prevotella bryantii B14] gi|299775685|gb|EFI72276.1| putative BatD protein [Prevotella bryantii B14] Length = 868 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 32/108 (29%), Gaps = 16/108 (14%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 L +F + V +SS D + D Y R N+ +A + +N+ Sbjct: 617 LLLLFAFVMVSLSAQAAPKSSADAASKKIADSEYLR------------GNYHQAIKDYNE 664 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + GV+ Y QA E P ++ Sbjct: 665 ILKR----GVSADIYYNLGNSYYRTDNLTQAILAYERAYLLAPGDADI 708 >gi|218438120|ref|YP_002376449.1| hypothetical protein PCC7424_1130 [Cyanothece sp. PCC 7424] gi|218170848|gb|ACK69581.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424] Length = 271 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 37/120 (30%), Gaps = 11/120 (9%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + + +C L ++ S E+Y K V L ++ A F Sbjct: 6 RLMGILAIFTYLCSLSPLAHAQNQ----PSQPQELNAVEIYNKGVDKLSAGDYQGAIADF 61 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV----DYVYYL 136 Q + P + A+ G ++ A + + + P YVY+L Sbjct: 62 TQAIQLAPNDA---DAYYNRAYGYLILGNFEGAIADYTKAVEINPNYTYAYGNRCYVYFL 118 >gi|158334579|ref|YP_001515751.1| TPR domain-containing protein [Acaryochloris marina MBIC11017] gi|158304820|gb|ABW26437.1| TPR domain protein [Acaryochloris marina MBIC11017] Length = 783 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 67/219 (30%), Gaps = 51/219 (23%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS-------AGK 109 + +A + A F++ P A ++ GK Sbjct: 30 PDALINRANKRATNGDLDGALGDFDEAIALNP----------AKATAYFNRGFLFNSLGK 79 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 ++ A E I P + D Y+ G SY + + +Q S+ + Sbjct: 80 FEAAIHDFSEAIELLP---DYDEAYFQRGNSY--------RQRGEFQRAIQDYSQAIRI- 127 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLV 216 +PY A + R +L + + Y +RG +++ + Sbjct: 128 --NPYCIKAYYKRADSRAELGDHPGALTDFSQVILRLPKDANAYCQRGIFLSQSGELEKA 185 Query: 217 LANYSDAEHAEEAMARLVEAYVA----LALMDEAREVVS 251 + ++ E RL +AY LA M EA + Sbjct: 186 IEDF--TSAIEHN-PRLADAYFHRGYCLAQMGEAEKASK 221 >gi|332259103|ref|XP_003278629.1| PREDICTED: tetratricopeptide repeat protein 38-like [Nomascus leucogenys] Length = 551 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 45/148 (30%), Gaps = 29/148 (19%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYEYF 80 L+G D L+ + +++ AV NF KA E + Sbjct: 72 TGLVLIGTGSSVKLDKELELAVKTMVEISRTQPLTRREQLHVSAVETFANGNFPKACELW 131 Query: 81 NQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVY 134 Q +D P M A + G +Q YP + ++ Sbjct: 132 EQILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPLSS 180 Query: 135 YLVGMSYAQMIRDVPYDQ--RATKLMLQ 160 Y+ G+ ++ YDQ + K L Sbjct: 181 YVKGIYSFGLMETNFYDQAEKLAKEALS 208 >gi|328542481|ref|YP_004302590.1| Tetratricopeptide repeat domain protein [polymorphum gilvum SL003B-26A1] gi|326412228|gb|ADZ69291.1| Tetratricopeptide repeat domain protein [Polymorphum gilvum SL003B-26A1] Length = 215 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 37/123 (30%), Gaps = 18/123 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117 + E+A LK N A + + P + R++ Y Y ++ Sbjct: 98 LMERAASALKAGNHPLALDLLDTVVSLRPDYTEGWNRRAT-----AHYLLQDYGRSLVDI 152 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E + P L G+ I D+RA LQ R +E + Sbjct: 153 ERVLALEPRHWGA-----LSGL----GIIQRQLDERAA--ALQSFRRALEINPGLDTARK 201 Query: 178 ARF 180 A Sbjct: 202 AVE 204 >gi|319902948|ref|YP_004162676.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides helcogenes P 36-108] gi|319417979|gb|ADV45090.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides helcogenes P 36-108] Length = 283 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 10/66 (15%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E L ++S A + D +++LLM A++ Y+ A + E ++ Sbjct: 106 ELGKDELARMDYSLALD----IEAD------NQEALLMRAYIYRQKRDYKAARADYERFL 155 Query: 122 TQYPES 127 P S Sbjct: 156 KLNPLS 161 >gi|282896805|ref|ZP_06304811.1| Lytic transglycosylase, catalytic [Raphidiopsis brookii D9] gi|281198214|gb|EFA73104.1| Lytic transglycosylase, catalytic [Raphidiopsis brookii D9] Length = 726 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 3/111 (2%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRY-QREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 ++ + +SS+ + D +R Y A +++ A E +D+ Sbjct: 59 AVGMTIAQSLPERSSKLREIAEKGDSPDRERARYVLASDYIQTNQGKPALELLVGLEKDY 118 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 P +A LL A Q G+ A+ L + + YP+S YL+G Sbjct: 119 P--VLAPYILLKQAQAQDMLGEKGLASDLRQRVLRDYPKSPAAVKAMYLIG 167 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 71/216 (32%), Gaps = 28/216 (12%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + +Y A ++ A + Q + FP +LL A + A Sbjct: 261 QTAKNLYRTARGLQLDKKRESAIVIYKQQVKLFPKEKETGTALLRLA----EMAPGRDAI 316 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + ++ I Q+P +++ + +Q Q ++ +Y++S Sbjct: 317 AYLDQIIAQFPS--QAPQALAQKA----KLLTSLKDNQS----ANQTWKLLLSKYSSSDA 366 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 R+ + + K +YV A Q + + A A + Sbjct: 367 ATEYRWQTALTK--------------AKNRDYVGAWEWAQPIPTQNPASILAPRASFWVG 412 Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + L +EAR+ + +PQ Y+A ++ Sbjct: 413 KWASLLGKNEEARKSYEYVLANFPQSYYAWRSARIL 448 >gi|269967694|ref|ZP_06181744.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|269827781|gb|EEZ82065.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 250 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 45/127 (35%), Gaps = 15/127 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + + Y +S Y A +G+ Y Sbjct: 137 YQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYS--------------ANSHYWLGQLYF 182 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A+ F V+ +Y D+ +A+ +L E +A++ + + YP Sbjct: 183 AKKQDEDAVKSFAAVV-SYKDSNKRADALLKLGEIAERNNNAAQAKKYYQQVVDEYPGSA 241 Query: 262 WARYVET 268 A+ + Sbjct: 242 SAKLASS 248 Score = 35.9 bits (82), Expect = 6.8, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 51/134 (38%), Gaps = 10/134 (7%) Query: 50 SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 T ++ Y+ AV LK+++++ A F Q +D+P + + S + ++ Sbjct: 126 QYTPNVDEQTAYQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKK 185 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + + A ++ +K D + ++ + A +Y ++V+ Sbjct: 186 QDEDAVKSFAAVVSYKDSNKRAD--------ALLKLGEIAERNNNAA-QAKKYYQQVVDE 236 Query: 169 YTNSPYVKGARFYV 182 Y S K A + Sbjct: 237 YPGSASAKLASSKL 250 >gi|298529797|ref|ZP_07017200.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira thiodismutans ASO3-1] gi|298511233|gb|EFI35136.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira thiodismutans ASO3-1] Length = 568 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 69/232 (29%), Gaps = 36/232 (15%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K L I + V +Q +T Y K++ + + KA Sbjct: 1 MGKKILVIMIAAVVLGCAPKTQQPETAKTGRELTPQAQVTYHYLKSLDYQAAGDHEKAAL 60 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + P + + A G+ Q+A + ++ YP + + Y+ Sbjct: 61 ALEKALVLGP----SVRLYQDLAREYLRQGEKQKAVDILQDATGIYPRTPEL---YFQ-- 111 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 M+ +++ D+ L+ +V + Y + Sbjct: 112 MAEFYLVKG---DRSGAVKALEKYKDLV--------PEDLDVYEDL------------AA 148 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 +Y++ +Y A+ +L E E + A L +A + Sbjct: 149 FYIEMRDYAGAV----DLLQEIPPDEMTPEMHYYMGRAKSELGEKTDAVAYL 196 >gi|149277134|ref|ZP_01883276.1| hypothetical protein PBAL39_09601 [Pedobacter sp. BAL39] gi|149232011|gb|EDM37388.1| hypothetical protein PBAL39_09601 [Pedobacter sp. BAL39] Length = 580 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 36/128 (28%), Gaps = 7/128 (5%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++Y A + +KA + FP + L+ + + + A++ + Sbjct: 454 KMYADAEMLEFRNQPAKALAKLDSIPLVFPNNSLLDDILMAKSRIYIKGKDFIAASAALK 513 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 I + S D + + +++ Y S Y A Sbjct: 514 ALIEKQSSSIWTDDAL-------FNLADLCEQKLGDNEQAKTLYQKLITDYPGSMYTAEA 566 Query: 179 RFYVTVGR 186 R R Sbjct: 567 RKRFRKLR 574 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQER 256 R Y+K +++AA + ++ S + ++A+ L + L ++A+ + + Sbjct: 497 RIYIKGKDFIAASAALKALIEKQSSSIWTDDALFNLADLCEQKLGDNEQAKTLYQKLITD 556 Query: 257 YPQGYW 262 YP + Sbjct: 557 YPGSMY 562 >gi|120435191|ref|YP_860877.1| TPR repeat-containing protein [Gramella forsetii KT0803] gi|117577341|emb|CAL65810.1| secreted protein containing tetratricopeptide repeats [Gramella forsetii KT0803] Length = 417 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 38/114 (33%), Gaps = 13/114 (11%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAV-LFLKEQNFSKAYEY-FN 81 L I F + + FL + S + TD E++ KA E N+ KA E Sbjct: 3 LKITFPLLLIFLTLFSSVSVNAQEEEFTTD-----ELFVKARTAAFDEDNYPKAIELTLQ 57 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN--VDYV 133 + + A + + K A E + + P ++ + Y Sbjct: 58 ALDKS---SSYA-DVRIFLGRLYTWTDKVDSARVAFERVLEENPGHQDGSLAYA 107 >gi|94968893|ref|YP_590941.1| von Willebrand factor, type A [Candidatus Koribacter versatilis Ellin345] gi|94550943|gb|ABF40867.1| von Willebrand factor, type A [Candidatus Koribacter versatilis Ellin345] Length = 628 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 20/168 (11%), Positives = 53/168 (31%), Gaps = 20/168 (11%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 ++ F ++ L + +R + ++++ D L ++++ A Q Sbjct: 114 VSAFNALGAAHLGLGQSDEARAAFAEAISLDDHLPNSYLNMGCAELALKDYAGAERDITQ 173 Query: 83 CSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGM 139 S P F + A+ QY YQ + + + V++ Sbjct: 174 ASSMAPLDF-----QVKAALAYSQYMNNNYQAVVATAD---DVHARKHSGAALVHFYAAA 225 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 ++ Q + + +++ SP A+ + ++ Sbjct: 226 AWDA--------QGNPAYAQRELRLLMKEDPKSPAAIQAKSLMQQLQD 265 >gi|75908225|ref|YP_322521.1| hypothetical protein Ava_2004 [Anabaena variabilis ATCC 29413] gi|75701950|gb|ABA21626.1| TPR repeat protein [Anabaena variabilis ATCC 29413] Length = 236 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 29/95 (30%), Gaps = 31/95 (32%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAG--------------VARKSL------------ 97 A+ ++ N+S+A NQ P +K++ Sbjct: 48 ALRSAQQGNYSEAIALLNQLINRHPDNAVDYNNRGLIYFQCGHTQKAIQDYNTALHLNPD 107 Query: 98 LMSAF---VQYSA--GKYQQAASLGEEYITQYPES 127 L SA+ Y A G+ A + + I P Sbjct: 108 LASAYNNRANYYAACGQLAAALADYDRAIDLNPRH 142 >gi|313124898|ref|YP_004035162.1| tetratricopeptide hypothetical protein [Halogeometricum borinquense DSM 11551] gi|312291263|gb|ADQ65723.1| tetratricopeptide repeat protein [Halogeometricum borinquense DSM 11551] Length = 248 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 12/106 (11%), Positives = 31/106 (29%), Gaps = 11/106 (10%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 K + + + +A + + R + A + A+ + G+ ++A E + Sbjct: 107 NKGAAHAQLEEYDEAIGAYKEALRIDDDSEHAASAETNLAYALWQFGETEEALHHAERAV 166 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y G + R + D + + Sbjct: 167 EI---DPRFAQAWYNRG--FFLQERGLSED------AVNAFDNAIR 201 Score = 35.1 bits (80), Expect = 9.5, Method: Composition-based stats. Identities = 26/204 (12%), Positives = 59/204 (28%), Gaps = 33/204 (16%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAG 108 D ++ + + +++ F +A E F + F + A+++ + Sbjct: 58 AKDQVDVEQLVDVGLSYMQINRFEEATETFERA-AQFADEDSLEAQEAWVNKGAAHAQLE 116 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y +A +E + + D ++ + + Sbjct: 117 EYDEAIGAYKEALR-------------------------IDDDSEHAASAETNLAYALWQ 151 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-NYSDAEHAE 227 + + + A G + +RG A+ F + +A+ E Sbjct: 152 FGETEEALHHAERAVEIDPRFAQAWYNRGFFLQERGLSEDAVNAFDNAIRLGMRNADVLE 211 Query: 228 EAMARLVEAYVALALMDEAREVVS 251 E A L DEA +V Sbjct: 212 EK----ARALEELGREDEAEQVQQ 231 >gi|149633153|ref|XP_001512517.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 419 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 1/75 (1%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEY 79 F L F ++A+ L +S D L ++ D ++ +Y + L F A E Sbjct: 281 SFLLAAFLNLAMPVLSPLGHTASHDACLAALGLDGANEKGLYRRGKARLLMNEFDLAIED 340 Query: 80 FNQCSRDFPFAGVAR 94 F + + P AR Sbjct: 341 FERVLKVNPQNRAAR 355 >gi|81300940|ref|YP_401148.1| soluble lytic transglycosylase [Synechococcus elongatus PCC 7942] gi|81169821|gb|ABB58161.1| probable soluble lytic transglycosylase [Synechococcus elongatus PCC 7942] Length = 690 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 64/184 (34%), Gaps = 31/184 (16%) Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E + Q +P + V +++L G++ A + + + YP S + Sbjct: 133 ETWRQLLNTYPESPVQAEAVLAL-------GQWDLAPATIQRWPR-YPASNELA------ 178 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 Q+ + P + + L + R R+ + + N A +I Sbjct: 179 ----RQLAKRQPAEAKRWLLQIAQFGRY--RF----DIDAVLSELQALPNLTARDRQQIA 228 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 Y +R +Y A Y+ + +E + R + + + AR + + +R+ Sbjct: 229 DAYWQRDDYATAA-------DLYARSPQTDETLYRQARSLDLSSQPEVARTLYQQLLQRF 281 Query: 258 PQGY 261 PQ Sbjct: 282 PQSP 285 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 27/86 (31%), Gaps = 15/86 (17%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 A + Y AA Y S D Y S D+ + + Sbjct: 227 IADAYWQRDDYATAAD-------LYARSPQTDETLYRQARSL-----DLSSQPEVARTLY 274 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVG 185 Q ++++R+ SP + A ++ Sbjct: 275 Q---QLLQRFPQSPERERALVHLVRL 297 >gi|327404890|ref|YP_004345728.1| hypothetical protein Fluta_2911 [Fluviicola taffensis DSM 16823] gi|327320398|gb|AEA44890.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola taffensis DSM 16823] Length = 364 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 29/86 (33%), Gaps = 3/86 (3%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 +S +D D + Y L +Q+++ A +YF + P + +A Sbjct: 135 KSEKDYEESIRLDANNPKAYYNYGTLKFLQQDYNAAIKYFTKSIELDPSSPMAYN---DR 191 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPE 126 Y +A E + + P Sbjct: 192 GSCYRMQENYPKAIEDYEAALRKNPN 217 >gi|116749053|ref|YP_845740.1| FG-GAP repeat-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116698117|gb|ABK17305.1| FG-GAP repeat protein [Syntrophobacter fumaroxidans MPOB] Length = 1133 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 42/141 (29%), Gaps = 20/141 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA---GKYQQAASLGE 118 + V + + ++ A F+ ++ P + A ++ G A S+ Sbjct: 53 NRGVGLMGQFDYEAARREFSALAQQHPDND---DIQVNLAIATFNRQTKGDEDLALSILA 109 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 PE Y G+ + +Y +++ A Sbjct: 110 GVFKHNPEHLR---ALYCTGL--------LELRVGRPAEAAEYFRKVIALDPRD---AEA 155 Query: 179 RFYVTVGRNQLAAKEVEIGRY 199 +++ QL+ E +G + Sbjct: 156 AYFLGQCLMQLSRYEEALGWF 176 >gi|291549329|emb|CBL25591.1| hypothetical protein RTO_08900 [Ruminococcus torques L2-14] Length = 487 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 29/76 (38%), Gaps = 7/76 (9%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y V L+ +++ +A EY + + +++ A G + A + Sbjct: 362 YAAGVDSLESEDYDQAIEYLTKVVKMDESYNDG----QAIYRLAQAYQGKGDTENAKTWY 417 Query: 118 EEYITQYPESKNVDYV 133 ++ + Y S+ ++ Sbjct: 418 QKMVDTYNNSRYIEDA 433 >gi|302892681|ref|XP_003045222.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256726147|gb|EEU39509.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 511 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 13/102 (12%), Positives = 30/102 (29%), Gaps = 18/102 (17%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A+ F A F++ K L + + G++++A + I Sbjct: 12 AALARYDNNEFEDAINEFSKIGD-------TSKILFNMGVIHATLGEHEKAVESYQRAIR 64 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + + Y+ G+S + + L + Sbjct: 65 L---DQYLAVAYFQQGVSNFLL--------GDFEEALANFND 95 >gi|255034468|ref|YP_003085089.1| Tetratricopeptide TPR_2 repeat-containing protein [Dyadobacter fermentans DSM 18053] gi|254947224|gb|ACT91924.1| Tetratricopeptide TPR_2 repeat protein [Dyadobacter fermentans DSM 18053] Length = 330 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 15/123 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A+ +L N A + + +P + S A V + + +A +L ++ Sbjct: 217 YHLAMNYLSTHNEPLAIQELERILIMYP-NDLTTMS--DLAVVYLATDQAGRARALIDKC 273 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + PE Y Y +I + + + + +S +V + Y A+ Sbjct: 274 LKLNPEHPKAAY--------YNALIDHIE---KRFQESHRKLSNLVTQNPP-VYGAKAKQ 321 Query: 181 YVT 183 Y+ Sbjct: 322 YLD 324 >gi|212635210|ref|YP_002311735.1| TPR domain-containing protein [Shewanella piezotolerans WP3] gi|212556694|gb|ACJ29148.1| TPR repeat protein [Shewanella piezotolerans WP3] Length = 578 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 41/126 (32%), Gaps = 30/126 (23%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ +LK+ +S+A + F Q P++ A Y A ++ A +I Sbjct: 395 QQGQRYLKKGAYSQAAQKFTQ-----PYSK---------ASAFYMAEDFKSAYIY---FI 437 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + + + AQ QR Q ++VE+Y + Sbjct: 438 RV-----DSAEALFGAANALAQ--------QREYIAARQVYQQVVEKYPAFKPAQTNLSK 484 Query: 182 VTVGRN 187 + + Sbjct: 485 IQKIID 490 >gi|4028023|gb|AAC96110.1| unknown [Desulfotomaculum thermocisternum] Length = 224 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 36/112 (32%), Gaps = 15/112 (13%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + RY R ++L+ + +A E + P ++ A G + Sbjct: 89 EPRYARGYANLGFVYLQMEKPDEAIEVLQKAIELNP---RIIQAWCNLANAYLQKGDLDR 145 Query: 113 AASLGEEYITQYP----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A + + P N+ YVYYL G D+ K L+ Sbjct: 146 ALETNLKMLEIAPDFSLGHNNLAYVYYLKG--------DMNRAAEHLKQALE 189 >gi|159904280|ref|YP_001551624.1| Tfp pilus assembly protein PilF [Prochlorococcus marinus str. MIT 9211] gi|159889456|gb|ABX09670.1| Tfp pilus assembly protein PilF [Prochlorococcus marinus str. MIT 9211] Length = 270 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 39/95 (41%), Gaps = 3/95 (3%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94 ++G ++ +D L + ++ A + ++ +A E+F++ + P +AR Sbjct: 119 VLGKWDEAVKDYELILAREPNNSLALFNLASAKGSQGDWLQAEEFFDKAANVQPGFVLAR 178 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + A Y + QA S I +YP + Sbjct: 179 ---ISKALANYQLKNFDQAESDLRAIIRKYPMFPD 210 >gi|126174973|ref|YP_001051122.1| TPR repeat-containing protein [Shewanella baltica OS155] gi|125998178|gb|ABN62253.1| Tetratricopeptide TPR_2 repeat protein [Shewanella baltica OS155] Length = 690 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 45/163 (27%), Gaps = 36/163 (22%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 A F ++ C L+ Q + + V Q+ A+ + Q+++ A + F Sbjct: 324 VASVGFATLIGCLLLAAAPQPAHASVWEDVWKTTDQQ-----AMQAYQSQDYANAAKQFE 378 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 QY AG Y+QA E+ + Y G + Sbjct: 379 SPQWR--------------GSAQYKAGDYEQALKTFEQ--------DSSAQGLYNQGNAL 416 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 Q+ + K Q + A + Sbjct: 417 MQLGK-----PDKAKERYQAALEKQADFP----AAKANLELAE 450 >gi|332664870|ref|YP_004447658.1| hypothetical protein Halhy_2921 [Haliscomenobacter hydrossis DSM 1100] gi|332333684|gb|AEE50785.1| hypothetical protein Halhy_2921 [Haliscomenobacter hydrossis DSM 1100] Length = 183 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 60/175 (34%), Gaps = 16/175 (9%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L+I + C + ++ L S T + + ++ + L + +Y Sbjct: 13 LSILLLFSACTVQEKGVSTATQAQLVS-TLGQLETQLRQAPEQDLDTAKVTTFVDYAQAL 71 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE----YITQYPESKNVDYVYYLVGM 139 + FP +A L +A + Y+ G+ A L + + Y S ++ G Sbjct: 72 AERFPQDSLAPLYLFRAAELSYATGQVDAAIDLWGKIHSGFNK-YNRSPEAA---FMQGF 127 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 D + + + + +Y P K A+ + + ++ +E+ Sbjct: 128 V-------AENDLKDKDKAINFYQAFLTQYPEHPMAKDAQVLMDNLKKGISDREL 175 >gi|330443717|ref|NP_014496.2| Ctr9p [Saccharomyces cerevisiae S288c] gi|329138967|tpg|DAA10640.2| TPA: Ctr9p [Saccharomyces cerevisiae S288c] Length = 1077 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 52/156 (33%), Gaps = 33/156 (21%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARK------------------------------SLL 98 + ++ KA + + + + PF A + L Sbjct: 676 SKHSYLKAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNEDVQL 735 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRAT 155 A +Y +A E + ++ K ++ L+G ++ R V + Q+A Sbjct: 736 NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQKAL 795 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 + + V+ + S ++ +F + + Q+A Sbjct: 796 ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAE 831 >gi|329764897|ref|ZP_08256488.1| TPR repeat-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138683|gb|EGG42928.1| TPR repeat-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 372 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 50/128 (39%), Gaps = 15/128 (11%) Query: 44 RDVYLDSVTDVRYQ-REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 +D S+ D Y +++++K V + ++ A F Q R P ++L+ + Sbjct: 19 KDHEETSLVDPDYNRKKLFKKGVNLMADEKLEDAAVIFEQALRIEPDN---IETLMKLGY 75 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 V++ +Y +A + ++ + + + L + + + Q+ L + Sbjct: 76 VRFHLEEYGEALKIYDKILDIDVTNPE---AWNLKALVHYE--------QKNYSKALDAV 124 Query: 163 SRIVERYT 170 + VE Sbjct: 125 EKAVESDP 132 >gi|328948719|ref|YP_004366056.1| hypothetical protein Tresu_1870 [Treponema succinifaciens DSM 2489] gi|328449043|gb|AEB14759.1| hypothetical protein Tresu_1870 [Treponema succinifaciens DSM 2489] Length = 299 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 3/80 (3%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y++ A ++P + + +L A Y Y+ A SL E Sbjct: 108 YQRGRALHSIGQNDSAVMALGSFCNEYPESKMYSSALYWIAECFYEDYDYETARSLYERI 167 Query: 121 ITQYPES---KNVDYVYYLV 137 I +YP+S + ++ YL+ Sbjct: 168 IYEYPDSAKCSDAEFKLYLI 187 Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 25/217 (11%), Positives = 72/217 (33%), Gaps = 37/217 (17%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K + F + + ++SS + + + ++ K++ ++ A Sbjct: 3 IKKRFVLAFLVLTFALPFAFSQKSSS---------GESAADSFVQGLICYKDKAWTDASV 53 Query: 79 YFNQCSRDFPFAGVAR--KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + Q + ++ + ++ + + A + + +I+ +PES + V Y Sbjct: 54 FLRQAADSEEYSTDSTWFMVIMSLVYS----EDFSSAVNACDYFISVFPESSLLPAVEYQ 109 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 G + + ++ + + Y S A +++ Sbjct: 110 RGRALHSIGQNDS--------AVMALGSFCNEYPESKMYSSALYWIAEC----------- 150 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 +Y Y A ++ ++ Y D+ +A +L Sbjct: 151 --FYEDYD-YETARSLYERIIYEYPDSAKCSDAEFKL 184 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 8/119 (6%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 ++FS A + FP + + +S G+ A + +YPESK Sbjct: 80 SEDFSSAVNACDYFISVFPESSLLPAVEYQRGRALHSIGQNDSAVMALGSFCNEYPESKM 139 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 Y + + + YD + RI+ Y +S A F + + Sbjct: 140 YSSALYWIAECFYE-----DYD---YETARSLYERIIYEYPDSAKCSDAEFKLYLITQH 190 >gi|258592799|emb|CBE69108.1| exported protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 249 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 74/234 (31%), Gaps = 39/234 (16%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 I + C L + + + T Y V L + +A F Q Sbjct: 5 IVIVLLGCVLAACATEQAAVKEEKADTH-------YNLGVARLASGDVKQAIAEFGQAIG 57 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 D P V R + + QA + + + P+ + Y +G ++ Q Sbjct: 58 DAPDNSVYRNA---LGLAYLMDRRLDQAVASFQRAVQLDPKFSD---AYNNLGSAFVQQ- 110 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 YDQ + + A + A + +G Y+ +G Sbjct: 111 --ADYDQ-----AVTAFRQ-------------ALLNPAYLSPEQA--HLNLGNVYMVQGR 148 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 A+ F+ L D EA RL AY+ ++ A ++L ++ P+ Sbjct: 149 TADAVMEFKRALDILPD---FAEAHNRLGYAYLVQGQLELAIAELTLAVKQAPE 199 >gi|261403114|ref|YP_003247338.1| TPR repeat-containing protein [Methanocaldococcus vulcanius M7] gi|261370107|gb|ACX72856.1| TPR repeat-containing protein [Methanocaldococcus vulcanius M7] Length = 589 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 64/224 (28%), Gaps = 44/224 (19%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +K L + +++ A F + ++L + + K+ +A EY+ Sbjct: 183 KKGRNLLLKNDYNNALIEFKKVLMRD---KYNIEALFGVGYCLNALNKFDEALGYWNEYL 239 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P+ + ++ G+S + + K + +++E Y Sbjct: 240 RLNPKDASG---WFNKGVSLYNL--------KDYKNAIYCFKKVIELNPK-----DVDSY 283 Query: 182 VTVGRNQLAAKEVEIG---------------------RYYLKRGEYVAAIPRFQLVLANY 220 + + L K+ Y Y AI ++ L Sbjct: 284 LFIINAYLYQKDYNGALEYVNEILKINPHWKFWKIKGDIYYSMKRYKDAIDSYKNALKYV 343 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 D EE + AY + A + P+ A+ Sbjct: 344 KD----EEIYISIGNAYKNIGDFKNALTYYEYALKLNPKNIIAK 383 >gi|203287976|ref|YP_002222991.1| TPR domain protein [Borrelia recurrentis A1] gi|201085196|gb|ACH94770.1| TPR domain protein [Borrelia recurrentis A1] Length = 215 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 26/67 (38%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + + + A ++F + K +++A Y +Y +A E + Sbjct: 101 GEAYFFQGQYKNALKHFQKYIGLDANGARIAKVYILTADSFYKLERYNEADFAYENALRF 160 Query: 124 YPESKNV 130 +P ++N+ Sbjct: 161 FPNNQNI 167 >gi|114591078|ref|XP_001160886.1| PREDICTED: prolyl 3-hydroxylase 2 isoform 7 [Pan troglodytes] Length = 709 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P+ ++V L + Y + + D D A+ + Sbjct: 315 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSTDP-ASIEARED 368 Query: 162 MSRIVERY 169 ++ V+R+ Sbjct: 369 LTMFVKRH 376 >gi|160880636|ref|YP_001559604.1| hypothetical protein Cphy_2504 [Clostridium phytofermentans ISDg] gi|160429302|gb|ABX42865.1| hypothetical protein Cphy_2504 [Clostridium phytofermentans ISDg] Length = 188 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 27/76 (35%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 ++Y L I I +C + + + +YE+A+ + + NF+ Sbjct: 1 MKKIYVMLLGICMIIVLCSCSKQSTNQVEESTDFATPKKDKDQIIYEEALDYAYDGNFAS 60 Query: 76 AYEYFNQCSRDFPFAG 91 A N+ + + Sbjct: 61 AVSKLNEFVEPYEDSE 76 >gi|163942289|ref|YP_001647173.1| hypothetical protein BcerKBAB4_4386 [Bacillus weihenstephanensis KBAB4] gi|163864486|gb|ABY45545.1| hypothetical protein BcerKBAB4_4386 [Bacillus weihenstephanensis KBAB4] Length = 404 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 1/75 (1%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+Y+ K+ N+ KA FN + + +A +L + + Y + L + Sbjct: 279 ELYKDGRSLYKQGNYEKAITVFNNVRKLLSDSDIADDALYFTILSKMEIKDYTEIEKLYD 338 Query: 119 EYITQYPES-KNVDY 132 E++ + K+ DY Sbjct: 339 EFLNNSSSNFKDSDY 353 >gi|186686313|ref|YP_001869509.1| hypothetical protein Npun_R6287 [Nostoc punctiforme PCC 73102] gi|186468765|gb|ACC84566.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC 73102] Length = 180 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 27/79 (34%), Gaps = 6/79 (7%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYS 106 S + + Y+ + + + +A E + + + + + Sbjct: 2 SAESLEIAKTFYQTGKIAFENGRYREAVENLEKASALLARN--SRFGGEVEICLVTAYEA 59 Query: 107 AGKYQQAASLGEEYITQYP 125 AG+ A +L E + ++P Sbjct: 60 AGRTDDAIALCER-LKRHP 77 >gi|326433829|gb|EGD79399.1| tetratricopeptide repeat domain-containing protein [Salpingoeca sp. ATCC 50818] Length = 903 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 56/171 (32%), Gaps = 34/171 (19%) Query: 93 ARKSLLMSAFVQYSAGKYQQAAS----LGEEYITQYPESKNVDYV--YYLVGMSYAQMIR 146 A + L +A+ + +Y QA E ++ P + D Y +G Y + Sbjct: 666 ASQGRLGAAYASHK--EYDQAIQHLTQALEAFLDA-PGDSDADIAGTYGCLGDVYFK-TG 721 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGE 205 D ++ K L + + L K + I G+ Y+K GE Sbjct: 722 DYVRAIKSCKEALNIYELKLGAHP------------------LTDKTLLILGQAYMKTGE 763 Query: 206 YVAAIPRFQLVLANYSDA-----EHAEEAMARLVEAYVALALMDEAREVVS 251 YV+AI F L D L AY D AR +S Sbjct: 764 YVSAIKYFNKRLQILPDTHGDNHPDTASVFHNLGSAYFKTGEYDSARHFLS 814 Score = 35.5 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 66/234 (28%), Gaps = 54/234 (23%) Query: 64 AVLFLKEQNFSKAYEYFNQCSR--------DFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 A ++ + + +A E + + D P Y KY +A Sbjct: 337 ARAYVNKGKYDRAIELLQEVLKIKESTFGHDHPSTANTYHG---LGKAWYHQSKYDEAIK 393 Query: 116 LGE-EYI----TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM-SRIVERY 169 E + T E + Y+ +G+++ D + L + E + Sbjct: 394 NFETAFEIQRRTLGEEHTDTATTYHSLGLAHHDK-GDCDTADSYYQKALSIRVRELGENH 452 Query: 170 TN--SPY------------VKGARFYVTVGRNQLAAK-----------EVEIGRYYLKRG 204 + S Y A Y N A K E +G Y +G Sbjct: 453 PDTASTYNNLGQMYNSRGNYVQAEKYFKKSLNIKADKLSDDHADTAATEHNLGHLYDNKG 512 Query: 205 EYVAAIPRFQLVLA--------NYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 E+ AI ++ L ++ D L Y + + A + + Sbjct: 513 EHDRAIKHYKKALEVRIKKLGPDHPDTACTY---HNLGLVYFKIGDDENALKQL 563 >gi|258404983|ref|YP_003197725.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfohalobium retbaense DSM 5692] gi|257797210|gb|ACV68147.1| Tetratricopeptide TPR_2 repeat protein [Desulfohalobium retbaense DSM 5692] Length = 563 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 87/273 (31%), Gaps = 64/273 (23%) Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLK 69 + +QL A T F + L+ + L + Q +Y E A + + Sbjct: 27 LTPPAQWQLSPAARTDFLFLKAQALLAEGNAPAAAQALSRALEEDPQPTLYLELAETYWR 86 Query: 70 EQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGK-YQQAASLGEEYITQYPE 126 + KA + + FP FA VA + + Y AG+ + AA+ YI +P+ Sbjct: 87 NEERQKAKTILKEATERFPDQFAFVANLAQI------YMAGQRPKAAAATLRSYIQDHPD 140 Query: 127 S---------------KNVDYVYYLVGMSYAQMIRDVPYDQRA-------------TKLM 158 + D + Q I + + + Sbjct: 141 NWTARAKLGEIQVRIQAFAD------AVDTLQTIPEPEREPEHLFFLGQAQAGLGLLQKA 194 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + V++ + A + R ++ +Y AAI + + Sbjct: 195 SDNLQSAVDKAPQ---MAKAWAELGYIRE--------------RQKDYPAAITAYTRLSE 237 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 D +E + RL+E ++ L D+A+ + Sbjct: 238 LQPD---NQEVLIRLIELHLELNNPDKAQTLAE 267 Score = 35.1 bits (80), Expect = 9.9, Method: Composition-based stats. Identities = 25/223 (11%), Positives = 65/223 (29%), Gaps = 19/223 (8%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 D R ++ KA + P K+ +++ Sbjct: 163 DTLQTIPEPEREPEHLFFLGQAQAGLGLLQKASDNLQSAVDKAPQ---MAKAWAELGYIR 219 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-IRDVPYDQRATKL---MLQ 160 Y A + P+++ V L+ + + + + Q + Sbjct: 220 ERQKDYPAAITAYTRLSELQPDNQEV-----LIRLIELHLELNNPDKAQTLAESGPGTES 274 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGR---NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + R V+ + + + AR + R + + Y+ ++ A R L Sbjct: 275 FRLRCVDVFLQNGFYTPARAMLDTIRESADFSPKTYLYEALYWYQKERNPA---RAIEAL 331 Query: 218 ANYSDA-EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + +++ L + ++ ++A +V + +P Sbjct: 332 RQIPASAPFYNQSLHFLGQMHLERDQPEQAVQVARKGKATFPD 374 >gi|298530866|ref|ZP_07018268.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510240|gb|EFI34144.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans ASO3-1] Length = 644 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 68/221 (30%), Gaps = 40/221 (18%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 D+ DS + ++ +A + ++ ++ + +L+ A Sbjct: 101 DISPDSPSIHVRLAAIFGRAKNLHQARDHARRASELD---------PHNWDALMKLARAH 151 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + + Q+A L ++ +T PE + V + + +++ R Sbjct: 152 HELEEPQKAKRLYQKVLTMNPEHPPA-----------YSSLGSVCRELNNPEEAREHLQR 200 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +E +S + L E R Y+ R + Sbjct: 201 ALELEPDSALH---HTRMGSVCKDLKLYEEA-------RDHYL----RALEI------DP 240 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 H E A +RL AY L + +A + E P A Y Sbjct: 241 HFEHAHSRLGNAYKHLGQISDALKSYRRALELDPDSVQAHY 281 >gi|183222246|ref|YP_001840242.1| TPR repeat-containing signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912298|ref|YP_001963853.1| TPR repeat-containing lipoprotein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776974|gb|ABZ95275.1| TPR-repeat-containing lipoprotein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780668|gb|ABZ98966.1| TPR-repeat-containing protein; putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 1197 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 31/264 (11%), Positives = 77/264 (29%), Gaps = 56/264 (21%) Query: 19 LYKFALTIFFSIA--VCFLVGWERQSSRDVYLDSVT-----DVRYQREVYEKAVLFLKEQ 71 + K + ++ C ++ + +D ++ + R + ++ Sbjct: 1 MKKNIILCVLLLSFIGCRSRDFQAVTVKDSVVEKSAASDRQKIEEARALIADGSNEFQKG 60 Query: 72 NFS-------KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 N + + F A + Y G Y+ A E+ Sbjct: 61 NMDVSLEKAKSSIQTFELVEG------YA-----LLGASHYQLGDYENAKIAYEKGNNLD 109 Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-NSPYVKGARFYVT 183 P+++ + L+G+ Q + L + + S Y Sbjct: 110 PQNEKI-----LIGLGTVQSTLGEN------EAALSTYQTLNKLKPEESIYTYKTG---I 155 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 + +N G Y ++ + L + D + E + +L + + L Sbjct: 156 LLKNL---------------GRYQESLVTLKS-LEDKQDFPYPVELLNQLGDVCLELKKY 199 Query: 244 DEAREVVSLIQERYPQGYWARYVE 267 +EA + ++ P+ A+ + Sbjct: 200 EEAESYFAKAEKLNPELKSAKDAK 223 Score = 38.9 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 60/191 (31%), Gaps = 42/191 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEE 119 ++ + + +A + + P K+ L A G+ ++ S+ E Sbjct: 610 KEGNALFNRKKYIEAVTPYQKAYDRVP------KASLLVKIAECYIEKGEEEKGLSILEN 663 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + E+ +S+ + I Y + K I++ +S Y Sbjct: 664 AVKSNKEN----------AISFKEGIYSFYYKKGELKRAEDGFYDILKEKPDSYYA---- 709 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA--EHAEEAMARLVEAY 237 +Y+ +KR Y AAI F + + + + + AY Sbjct: 710 YYMLGLVT-------------MKRKNYEAAIGEFDKAILVNPNFAPSNVAKGL-----AY 751 Query: 238 VALALMDEARE 248 L MD A+ Sbjct: 752 YKLNQMDAAKR 762 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 18/143 (12%), Positives = 47/143 (32%), Gaps = 18/143 (12%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSL 97 + R+ V D + Y A+ + E ++A + P F Sbjct: 757 MDAAKREFEKARVKDSEFGLSSYNLAIAYFNEDLTNEAKSILESIRKSDPDF----MDGE 812 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + A++ + K ++A + + + P ++ + + + I D Q ++ Sbjct: 813 IQLAYIYFKENKLEEAEKTIDRVLKEEPSAEAL-FAQF--------KILDAKLKQSPSEK 863 Query: 158 MLQYMSRI----VERYTNSPYVK 176 + + + Y + Y + Sbjct: 864 TKSKRNTVKEKILREYGETKYAR 886 >gi|157827613|ref|YP_001496677.1| hypothetical protein A1I_06620 [Rickettsia bellii OSU 85-389] gi|157802917|gb|ABV79640.1| hypothetical protein A1I_06620 [Rickettsia bellii OSU 85-389] Length = 250 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 17/143 (11%), Positives = 43/143 (30%), Gaps = 15/143 (10%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + DV ++ Y+ A+ K+ A F + +P + + + Sbjct: 107 KTAPEPNKDVAPDKQAYDLALASYKDNKTDDAKNKFKNFIQKYPKSSMISNAYFWYGECF 166 Query: 105 YSAGKYQQAASLGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + Y AA Y+ Y P+ + +S ++ + T Sbjct: 167 FKQKDYNTAAVN---YLKGYKESPKGAKSSDALLKLALSLGEL--------KKTTEACNI 215 Query: 162 MSRIVERYTNSPYVKGARFYVTV 184 + ++ + + + A + Sbjct: 216 LDKLNKEFPGNNRTA-ASKKMAE 237 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 44/131 (33%), Gaps = 30/131 (22%) Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 Y + ++ + + T +++Y S + A F+ Sbjct: 123 YDLALASYKDNK--------TDDAKNKFKNFIQKYPKSSMISNAYFWYGEC--------- 165 Query: 195 EIGRYYLKRGEY-VAAIPRFQLVLANYSDAE---HAEEAMARLVEAYVALALMDEAREVV 250 + K+ +Y AA+ L Y ++ + +A+ +L + L EA ++ Sbjct: 166 -----FFKQKDYNTAAVNY----LKGYKESPKGAKSSDALLKLALSLGELKKTTEACNIL 216 Query: 251 SLIQERYPQGY 261 + + +P Sbjct: 217 DKLNKEFPGNN 227 >gi|116623140|ref|YP_825296.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116226302|gb|ABJ85011.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] Length = 311 Score = 40.5 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 9/86 (10%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQY 105 L D + ++ + + + F A ++ + + P F+ L A + Sbjct: 222 LTRPGDALAESQL---GMTYFELGQFDNAVKHLERARKLDPAHFSH----PQLYLAEIHL 274 Query: 106 SAGKYQQAASLGEEYITQYPESKNVD 131 G+ AA + E+++ +P+ D Sbjct: 275 RRGEKAAAADVLEDFLLHHPDYPQAD 300 >gi|330836583|ref|YP_004411224.1| Tetratricopeptide TPR_2 repeat-containing protein [Spirochaeta coccoides DSM 17374] gi|329748486|gb|AEC01842.1| Tetratricopeptide TPR_2 repeat-containing protein [Spirochaeta coccoides DSM 17374] Length = 229 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 208 AAIPRFQLVLANY-SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 AA+ ++Q+V +Y D A A+ Y +D AR V + + YP +AR Sbjct: 163 AALGQYQMVADSYGQDIAVAPRALFGEARIYEKTGDIDLARAVFQELADAYPSSEFARIA 222 Query: 267 ET 268 + Sbjct: 223 QN 224 >gi|255639673|gb|ACU20130.1| unknown [Glycine max] Length = 357 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 23/77 (29%), Gaps = 11/77 (14%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEY 120 KA ++ N+ AY+ Q P A ++ + +A S + Sbjct: 8 KAKEAFEDDNYDLAYDLLTQAIGLSPNNADLYADRAQVNI-----KVNNLTEAVSDANKA 62 Query: 121 ITQYPESKNVDYVYYLV 137 I P YL Sbjct: 63 IELNPSHSKA----YLR 75 >gi|15606922|ref|NP_214303.1| hypothetical protein aq_1896 [Aquifex aeolicus VF5] gi|2984175|gb|AAC07708.1| hypothetical protein aq_1896 [Aquifex aeolicus VF5] Length = 342 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 66/198 (33%), Gaps = 43/198 (21%) Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 F + + K ++A Y +A + + + P+ + G+ Sbjct: 17 FPKVEQRH------WKVYYDLGTAAFAARNYSEAIANFHKALRANPDEPRIWNAL---GL 67 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-----V 194 +Y + + K + + + N AR + + +L E + Sbjct: 68 AYMEA--------KEYKKAEESFKKALSINPN---YSEARKNLGILYYKLGRYEEALKYL 116 Query: 195 EIG---RYYLKRGE---YVAAIPRFQLVLANYSDAEHAEEAMAR----------LVEAYV 238 + YY K+ E Y+A + + L NY + E+A+A L +AY Sbjct: 117 QEAANDEYYEKKHEAFYYLAKVYEAKQDLKNY--VRYLEKAVAYNPNFVQAQLELAQAYE 174 Query: 239 ALALMDEAREVVSLIQER 256 L +EA ++ + Sbjct: 175 NLGKYEEAEKIYKSLLLN 192 >gi|323499300|ref|ZP_08104277.1| TPR domain protein in aerotolerance operon [Vibrio sinaloensis DSM 21326] gi|323315688|gb|EGA68722.1| TPR domain protein in aerotolerance operon [Vibrio sinaloensis DSM 21326] Length = 587 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 27/84 (32%), Gaps = 15/84 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGV-----ARKS------LLMSAFVQYS 106 ++A ++ +A E F + ++ A Sbjct: 349 QQAKQLFDAGDYQQAAELFEDPDWKGIAQYKAGDYKGAVQTLQAAEGVEGKYNYANALAQ 408 Query: 107 AGKYQQAASLGEEYITQYPESKNV 130 +G+ ++A L E+ + PE K+ Sbjct: 409 SGELEKAVQLYEQILQTAPEHKDA 432 >gi|228473246|ref|ZP_04058001.1| aerotolerance-related protein BatE [Capnocytophaga gingivalis ATCC 33624] gi|228275396|gb|EEK14188.1| aerotolerance-related protein BatE [Capnocytophaga gingivalis ATCC 33624] Length = 254 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 9/76 (11%), Positives = 24/76 (31%), Gaps = 3/76 (3%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + E++ +A ++ +A + + + + A Y + Sbjct: 23 QSNAELFAQAGSAYNRGDWQEAIDNYRRILSK---GEASASLYYNLANAYYKTEDVAHSI 79 Query: 115 SLGEEYITQYPESKNV 130 E+ + PE K + Sbjct: 80 YYYEKALELSPEDKAI 95 >gi|114591088|ref|XP_001160575.1| PREDICTED: leprecan-like 1 isoform 2 [Pan troglodytes] Length = 689 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P+ ++V L + Y + + D D A+ + Sbjct: 315 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSTDP-ASIEARED 368 Query: 162 MSRIVERY 169 ++ V+R+ Sbjct: 369 LTMFVKRH 376 >gi|88703968|ref|ZP_01101683.1| TPR domain protein [Congregibacter litoralis KT71] gi|88701795|gb|EAQ98899.1| TPR domain protein [Congregibacter litoralis KT71] Length = 923 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 3/69 (4%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A L E N+ A + FNQ + +LL++ K A E ++ Sbjct: 273 RAQLLFDEGNYEGAIDLFNQILSV---SPDNPGALLLAGNANARINKLPIARRHLERFLE 329 Query: 123 QYPESKNVD 131 P S Sbjct: 330 LQPGSTQAA 338 >gi|195455330|ref|XP_002074672.1| GK23037 [Drosophila willistoni] gi|194170757|gb|EDW85658.1| GK23037 [Drosophila willistoni] Length = 482 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 19/163 (11%), Positives = 52/163 (31%), Gaps = 22/163 (13%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDV-RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 I+ +D+ +D V + ++ ++ ++K+ ++ A E + + +P Sbjct: 72 ISPSGSAAGTPTEKQDLPVDLVAQQHKKANDIKDRGNTYVKKGDYDHAIEAYTEAVDVYP 131 Query: 89 FAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 + + ++L Y E I K YY + + Sbjct: 132 YDPIYFSNRAL-----CYLKKEDYNSCVEDCEAAIRL---DKLCAKAYYRRMQANESLGN 183 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 ++ L+ + ++ + K + + N+L Sbjct: 184 NM--------EALKDCTSVLAIEPKNVEAKTSLARI---NNRL 215 >gi|162451084|ref|YP_001613451.1| hypothetical protein sce2812 [Sorangium cellulosum 'So ce 56'] gi|161161666|emb|CAN92971.1| hypothetical protein sce2812 [Sorangium cellulosum 'So ce 56'] Length = 557 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 50/156 (32%), Gaps = 25/156 (16%) Query: 43 SRDVYLDSVTDVRYQREVYE--KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 RD S +V + ++ + L++ A + P K + Sbjct: 3 ERDDPRPSTREVAAEEFLFHLHRGSELLQDNRVHAAKAELERALSLQPSDP---KGQDLL 59 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPES--KNVDYVY-YLVGMSYAQMIRDVPYDQRATKL 157 V + G Y +A ++ E I +PE+ ++ YL T Sbjct: 60 GIVYFRLGLYPRAIAIYERLIQAHPEAVEPRINLALSYLK-----------------TGQ 102 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Q S + + +P + A Y+ + ++ E Sbjct: 103 PAQARSELEKALEQNPKHQRAWGYLGLAFQRMGDYE 138 >gi|172062965|ref|YP_001810616.1| TPR repeat-containing protein [Burkholderia ambifaria MC40-6] gi|171995482|gb|ACB66400.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria MC40-6] Length = 285 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 4/100 (4%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + F+ + L G + S Q E+ A L N A Sbjct: 3 RSVIRALAFAAVLPVLAGGCAPGIQTRPALSQKSDDPQAEL-RIADSALAGGNVELASTL 61 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + + P + +A + L V Y AG ++A L E+ Sbjct: 62 YGKVLARHPDS-LA--AQLGLGDVNYRAGDLERARILYEQ 98 >gi|90577283|ref|ZP_01233094.1| hypothetical protein VAS14_09569 [Vibrio angustum S14] gi|90440369|gb|EAS65549.1| hypothetical protein VAS14_09569 [Vibrio angustum S14] Length = 674 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 40/128 (31%), Gaps = 33/128 (25%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A + + +A + F + + +Y A Y QA + Sbjct: 345 QQAYQTYTDGKYKQAAQDFE-----------SPQWK---GIAEYKAKDYAQAIETLK--- 387 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P ++ Y +G +YAQ + + ++ + N P + Sbjct: 388 ---PLHDSMS--QYNLGNAYAQS--------GKLQQAVDTYEKLQKADPNYP---DVKKN 431 Query: 182 VTVGRNQL 189 + + + L Sbjct: 432 LDIVKKAL 439 >gi|16082148|ref|NP_394586.1| hypothetical protein Ta1127 [Thermoplasma acidophilum DSM 1728] gi|10640440|emb|CAC12254.1| conserved hypothetical protein [Thermoplasma acidophilum] Length = 529 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 31/241 (12%), Positives = 72/241 (29%), Gaps = 60/241 (24%) Query: 63 KAVLFLKEQNFSKAYEYF---NQCSRDFP---------FAGV------------ARKSLL 98 KA ++ ++ A + ++ P + + A K+ Sbjct: 66 KADALYRKGDYEDALDVLNFAETIEKNNPELLSLKSICYGSLGKFNESKIEATKAIKADP 125 Query: 99 MSAFVQYS-------AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 F Y+ +Y A ++Y+ P + + D+ Y Sbjct: 126 NYPFAYYNRAKAEQYLEEYDIAKKDLQKYLEMQPNDPDA-----------YMDLADMEYH 174 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK--EVEIG-----RY-YLKR 203 + K LQ+++ +++ S + + + + + E+ + Y+ Sbjct: 175 EGDYKKALQHVNTAIKKDKESTDAHDLKLNILLAQKDIENYLKELLEAFKDTEDFKYIGT 234 Query: 204 --------GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 G + A + + Y D +A+AR+ Y D R L++ Sbjct: 235 LVETLKSVGSFDTAEDILKEFIKIYKDEPFLYDALARVY--YDQDRKDDAYRTYEELLKS 292 Query: 256 R 256 Sbjct: 293 N 293 >gi|148254947|ref|YP_001239532.1| SPINDLY family O-linked N-acetylglucosamine transferase [Bradyrhizobium sp. BTAi1] gi|146407120|gb|ABQ35626.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family [Bradyrhizobium sp. BTAi1] Length = 742 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 13/109 (11%), Positives = 29/109 (26%), Gaps = 16/109 (14%) Query: 64 AVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 V F +A D + ++ + G+Y++A + E I Sbjct: 64 GVSERDSGRFDEAVLVLTRAIESD----PRSAEAQSDLGLALFRLGRYEEARARYERAIA 119 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 P +G + + R + + R + + Sbjct: 120 LRPNFPA---ALTHLGNTLMNLFR--------FEEAISAHDRAIALKPD 157 >gi|67921673|ref|ZP_00515191.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] gi|67856785|gb|EAM52026.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] Length = 226 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 27/234 (11%), Positives = 71/234 (30%), Gaps = 39/234 (16%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 ++ + ++ + + S+ DV D++ +Y++A+ +K+ + Sbjct: 1 MKKIKSIMSRLSLAVILISMTACAVPSTSDVAEG---DIKKSEVLYQQALEKVKKGDLKA 57 Query: 76 AYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 A E + + + + + ++A + I + Y Sbjct: 58 ALEDYNQAIEAN----PQNSDAYSNRGNAYFLLKQPEEAMKNYNQAIKL---DPELSRPY 110 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 Y G Y + + +L ++ ++ + + Y+ A V + L + Sbjct: 111 YNRGFLYQR--------EGKPELAVKDYNKTISLNPD--YIP-AYLNRAVVLSILGDNQ- 158 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 AI + V+ + +Y L ++A E Sbjct: 159 -------------GAIEDYNKVIETDPNLPQLY---FNRAASYSELGNPEKAME 196 >gi|115377579|ref|ZP_01464777.1| TPR repeat, putative [Stigmatella aurantiaca DW4/3-1] gi|115365427|gb|EAU64464.1| TPR repeat, putative [Stigmatella aurantiaca DW4/3-1] Length = 543 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 39/112 (34%), Gaps = 18/112 (16%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 K ++ L+ +A ++F + R F ++ F+ G Y +A + + Sbjct: 260 NKGLISLQAGKKEEAKKHFIKALR---FNQEQAQAYQNLGFIYLEEGAYGKAHDNFQRAL 316 Query: 122 TQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 P DY Y +G++ +M + + + I+ N Sbjct: 317 KVNP-----DYLEARYNLGLTLMKMEKG--------EEAKKEFRTILAVNPN 355 >gi|42742275|gb|AAS45240.1| cartilage associated protein [Gallus gallus] Length = 393 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 26/72 (36%), Gaps = 13/72 (18%) Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E + R P+ + F + A +A + ++ ++P+ + + Sbjct: 127 ELLEEFQRREPY-KYLQ-------FAYFKANNLPKAIAAAHTFLLKHPDDEMM-----QR 173 Query: 138 GMSYAQMIRDVP 149 M+Y + I D Sbjct: 174 NMAYYKSIPDAD 185 >gi|1732237|gb|AAB38704.1| CTR9 [Saccharomyces cerevisiae] Length = 1077 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 52/156 (33%), Gaps = 33/156 (21%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARK------------------------------SLL 98 + ++ KA + + + + PF A + L Sbjct: 676 SKHSYLKAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNEDVQL 735 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRAT 155 A +Y +A E + ++ K ++ L+G ++ R V + Q+A Sbjct: 736 NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQKAL 795 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 + + V+ + S ++ +F + + Q+A Sbjct: 796 ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAE 831 >gi|83816032|ref|YP_445721.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855] gi|83757426|gb|ABC45539.1| Tetratricopeptide repeat family [Salinibacter ruber DSM 13855] Length = 665 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 77/262 (29%), Gaps = 38/262 (14%) Query: 21 KFALTIFFSIAVCFLVGWE---RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + A + + L+G S ++ + T R + + + ++ +A Sbjct: 85 RLAPPLGAVLLCTLLMGGPPPTVASPAVLFPSADTTSPRARRLLIQGTTEAQLGDYEEAI 144 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 +F P A LL A + G A TQ S Sbjct: 145 SHFEAALEQVP---EAPVLLLALADAHEAQGALSTALFYARRAQTQ--GSPRP------- 192 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV----GRNQLAAKE 193 S + + ++ L+ ++++ N+ AR + + + + E Sbjct: 193 --SPYRRLAEMQRAAGDPAAALRTYQQLLDHVPNANDAHRARAAIQADLGRTKGAIQSYE 250 Query: 194 VEIGR--------------YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + + R Y K G+ + ++ + RL E Y Sbjct: 251 IYLQRADSPPIDVYRRLLSLYRKTGDKDGVETTLRTLVERRPTVRSYQR---RLGEYYAD 307 Query: 240 LALMDEAREVVSLIQERYPQGY 261 +A +++ + ++P Sbjct: 308 EGRPRKALALLAPLGRQFPNDE 329 >gi|55725300|emb|CAH89515.1| hypothetical protein [Pongo abelii] Length = 475 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 86/294 (29%), Gaps = 56/294 (19%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREV 60 +A+ I + + + +++ + +G + Q+S + +D + Sbjct: 183 QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAAL 242 Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K ++ KA E++ D + +L + +A Sbjct: 243 TNKGNTVFANGDYEKAAEFYKEALRND---SSCTE-ALYNIGLTYEKLNRLDEALDC--- 295 Query: 120 YITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKL--------- 157 ++ + +N V Y + Y Q++ +P D + Sbjct: 296 FLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKLGELYDREG 355 Query: 158 ----MLQYMSRIVERYT--------------NSPYVKGARFYVT---VGRNQLAAKEVEI 196 QY + ++ + + A Y + + ++ + Sbjct: 356 DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMV 415 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 + + G Y A+ ++ + + E + LV L L D A+E Sbjct: 416 ASCFRRSGNYQKALDTYKDTRRKFPE---NVECLRFLVRLCTDLGLKD-AQEYA 465 >gi|326920762|ref|XP_003206637.1| PREDICTED: hypothetical protein LOC100538424, partial [Meleagris gallopavo] Length = 1036 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 66/201 (32%), Gaps = 41/201 (20%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV- 130 N SKA E ++ + P ++ +Q A K + A ++ I S+ + Sbjct: 497 NHSKAIECLHEAATTQPE----PSVFVLLGKIQMKAEKTEDAVGSFKQAINLLMTSEKIL 552 Query: 131 ------DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY---------- 174 +YYL+G+ Y + I + R+ Y ++ Y Sbjct: 553 PPTFEAAEMYYLMGLCYMEQINLLE-----ACDAFSMAIRLHSSYPDAFYQRGLCRMQLR 607 Query: 175 ----VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 ++ + + + A + YY +G Y AI + + ++ Sbjct: 608 QTKCIQDFNHTLELCPSHFQAY-MGRAAYYGSKGRYSKAIMNCNEAIKIHPNS------- 659 Query: 231 ARLVEAYVALALMDEAREVVS 251 V+AY ++ + + Sbjct: 660 ---VKAYFYRGILKYQNKALK 677 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 13/110 (11%), Positives = 35/110 (31%), Gaps = 13/110 (11%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + +L+++ +++ A E + P ++ Y +++ A + + Sbjct: 698 NRGLLYMELGDYANACEDLKEAVLLSPGDSQIFQA---IGTCHYRLNEFEDAVRSFNQVL 754 Query: 122 TQYPESKNVDYVYYL-VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 P S Y+ G SY + + K + + + Sbjct: 755 RLEPVSVEA----YIGRGNSYMKKGHEADL-----KQAQKDFLKAIHLNP 795 >gi|296211098|ref|XP_002752266.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4 [Callithrix jacchus] Length = 459 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 44/144 (30%), Gaps = 26/144 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRD-----FPFAGVARKSL-------LMSAFVQYSAGK 109 E+ ++ KE + +A + + + A+K+ L A Sbjct: 275 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSSEEAQKAQALRLASHLNLAMCHLKLQA 334 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + D ++++ Y Sbjct: 335 FSAAIGSCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 383 Query: 170 TNSPYVKGARFYV--TVGRNQLAA 191 N+ A+ + R QLA Sbjct: 384 PNNK-AAKAQLAMCQQRIRRQLAR 406 >gi|2565014|gb|AAB81882.1| Cdp1p [Saccharomyces cerevisiae] Length = 1077 Score = 40.5 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 52/156 (33%), Gaps = 33/156 (21%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARK------------------------------SLL 98 + ++ KA + + + + PF A + L Sbjct: 676 SKHSYLKAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNEDVQL 735 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRAT 155 A +Y +A E + ++ K ++ L+G ++ R V + Q+A Sbjct: 736 NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQKAL 795 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 + + V+ + S ++ +F + + Q+A Sbjct: 796 ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAE 831 >gi|330823109|ref|YP_004386412.1| tetratricopeptide TPR_1 repeat-containing protein [Alicycliphilus denitrificans K601] gi|329308481|gb|AEB82896.1| Tetratricopeptide TPR_1 repeat-containing protein [Alicycliphilus denitrificans K601] Length = 734 Score = 40.5 bits (94), Expect = 0.29, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 14/103 (13%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + LK ++ +A F+Q P A +L+ + ++ QA + + I Sbjct: 187 NRGNALLKSRHLLEAVASFDQALALQP--QYA-DALVNRGNARLQRKEHAQAFADLDRAI 243 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 P D Q++ + D + + LQ R Sbjct: 244 RLNP-----DQAQ------SRQLMGTLLRDSKRHEEALQEFQR 275 >gi|257457422|ref|ZP_05622592.1| putative TPR domain protein [Treponema vincentii ATCC 35580] gi|257445151|gb|EEV20224.1| putative TPR domain protein [Treponema vincentii ATCC 35580] Length = 1044 Score = 40.5 bits (94), Expect = 0.29, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 53/192 (27%), Gaps = 38/192 (19%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + A E + G + L A G Y +AA I P+ + Sbjct: 92 GRYDAALEILKKAEDI---GGDTDEILYNIAKTYKRMGNYDEAADYFSRAIEVKPDHAHA 148 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 + ++ T ++ + + N PY+ Sbjct: 149 -----------YDRLGNLYVLTGDTDKAIEVYKQGLRVDPNHPYLN-------------- 183 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA---- 246 + + Y AI + L E + + AY+ L +D+A Sbjct: 184 ---FHLAGLLRQEKRYEEAIVYYNSALRINP---AWGEVLLGIAAAYLQLDKLDDALNTY 237 Query: 247 REVVSLIQERYP 258 R ++ + E P Sbjct: 238 RSLLRVTGENAP 249 Score = 35.5 bits (81), Expect = 8.1, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 65/205 (31%), Gaps = 38/205 (18%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++E+A L Q+F A + + P K + A + G +++ + Sbjct: 8 IFERANSALITQDFEYAEQLLTNVLKKHPDILPNDKTKIESLLARIYGDEGDLERSLAA- 66 Query: 118 EEYITQYPESK-NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 Y+ Y NVD + +S ++ R + L+ + + + Sbjct: 67 --YLRLYEREPDNVD-----LMLSLGRIYRHLGR----YDAALEILKK----------AE 105 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 I + Y + G Y A F + D HA + RL Sbjct: 106 DIGGDTDEIL-------YNIAKTYKRMGNYDEAADYFSRAIEVKPDHAHAYD---RLGNL 155 Query: 237 YVALALMDEAREVVSL---IQERYP 258 YV D+A EV + +P Sbjct: 156 YVLTGDTDKAIEVYKQGLRVDPNHP 180 >gi|149922228|ref|ZP_01910666.1| hypothetical protein PPSIR1_24009 [Plesiocystis pacifica SIR-1] gi|149816968|gb|EDM76453.1| hypothetical protein PPSIR1_24009 [Plesiocystis pacifica SIR-1] Length = 407 Score = 40.5 bits (94), Expect = 0.29, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 33/87 (37%), Gaps = 4/87 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVAR---KSLLMSAFVQYSAGKYQQAASLG 117 + L++ ++A F + + + ++ L A Q G ++ A Sbjct: 58 ARGEAALEDGQPARAAALFARTLGASGAGSDASGELGRAYLGLARAQEQLGDFEAAIRAY 117 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQM 144 + +I ++P+ + V G A++ Sbjct: 118 DGFIARFPDDAQLATVLARRGACEAEL 144 >gi|322419010|ref|YP_004198233.1| TPR repeat-containing protein [Geobacter sp. M18] gi|320125397|gb|ADW12957.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp. M18] Length = 230 Score = 40.5 bits (94), Expect = 0.29, Method: Composition-based stats. Identities = 14/125 (11%), Positives = 46/125 (36%), Gaps = 14/125 (11%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + +L + ++ +A + G ++ L V ++ K + A E+ + Sbjct: 118 NLGLAYLGKGDYPQA---LSVLRAQVAKNGSDPRTRLGLGRVYFAMDKTELAVEEYEKAL 174 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 +++ +Y +G++ ++ + + +V +S + +R Y Sbjct: 175 QL---NRSYASAHYHMGLAQMKL--------KDAQAAKGAFQEVVRLAPDSEIGQLSREY 223 Query: 182 VTVGR 186 + + + Sbjct: 224 LDLLK 228 >gi|91203857|emb|CAJ71510.1| similar to O-linked GlcNAc transferase [Candidatus Kuenenia stuttgartiensis] Length = 430 Score = 40.5 bits (94), Expect = 0.29, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 55/185 (29%), Gaps = 24/185 (12%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV--- 130 + A + P +AR L A + G Y +A E I P + + Sbjct: 219 NDAINLYKNLLAKDPSNIIAR---LNLADIYMENGLYDEAILEYENIIRITPNNIHALCK 275 Query: 131 ---DYVYYLVG------MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 Y G + Y + I P A + + + + A Sbjct: 276 LGEAYAE--KGQPEKAILIYNKAIASNP----AFSKAYKELGSVYMQTGLYDDAISAWSK 329 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 + +G Y + + AI F+ L+ + + L +AY Sbjct: 330 FIALSPGSSKIHFNLGLAYANKDMFSEAIAAFKKALSIDPENIQT---LYHLADAYDKSG 386 Query: 242 LMDEA 246 L+D+A Sbjct: 387 LIDDA 391 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 58/186 (31%), Gaps = 44/186 (23%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFL----------------------KEQNFSKA 76 + S + ++ D+ + +Y++A+L ++ KA Sbjct: 230 AKDPSNIIARLNLADIYMENGLYDEAILEYENIIRITPNNIHALCKLGEAYAEKGQPEKA 289 Query: 77 YEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 +N+ P F+ K+ V G Y A S ++I P S + ++ Sbjct: 290 ILIYNKAIASNPAFS----KAYKELGSVYMQTGLYDDAISAWSKFIALSPGSSKI---HF 342 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP----YVKGARFYVTVGRNQLAA 191 +G++YA + + + + ++ A + + A Sbjct: 343 NLGLAYANKD--------MFSEAIAAFKKALSIDPENIQTLYHLADAYDKSGLIDD--AF 392 Query: 192 KEVEIG 197 E I Sbjct: 393 HEYNIA 398 >gi|47940054|gb|AAH71516.1| FK506 binding protein 4 [Danio rerio] Length = 450 Score = 40.5 bits (94), Expect = 0.29, Method: Composition-based stats. Identities = 18/145 (12%), Positives = 42/145 (28%), Gaps = 27/145 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRD-------FPFAGVARKSL-----LMSAFVQYSAGK 109 EK + KE + +A + + P K+L L A Sbjct: 270 EKGTQYFKEGKYKQAIVQYKRIVSWLEHESSMQPDDEEKAKALRLAAYLNLAMCYLKLQD 329 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 A ++ + ++ + G + M + + R++E Y Sbjct: 330 ANPALENCDKALELDANNEK---ALFRRGEALVVM--------KEFDMAKVDFQRVIELY 378 Query: 170 TNSPYVKGARFYVTVGRNQL-AAKE 193 + A+ +++ + + E Sbjct: 379 PANK---AAKSQISICQKHMREQHE 400 >gi|41393101|ref|NP_958877.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Danio rerio] gi|28279562|gb|AAH45387.1| FK506 binding protein 4 [Danio rerio] gi|182891952|gb|AAI65584.1| Fkbp4 protein [Danio rerio] Length = 449 Score = 40.5 bits (94), Expect = 0.29, Method: Composition-based stats. Identities = 18/145 (12%), Positives = 42/145 (28%), Gaps = 27/145 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRD-------FPFAGVARKSL-----LMSAFVQYSAGK 109 EK + KE + +A + + P K+L L A Sbjct: 270 EKGTQYFKEGKYKQAIVQYKRIVSWLEHESSMQPDDEEKAKALRLAAYLNLAMCYLKLQD 329 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 A ++ + ++ + G + M + + R++E Y Sbjct: 330 ANPALENCDKALELDANNEK---ALFRRGEALVVM--------KEFDMAKVDFQRVIELY 378 Query: 170 TNSPYVKGARFYVTVGRNQL-AAKE 193 + A+ +++ + + E Sbjct: 379 PANK---AAKSQISICQKHMREQHE 400 >gi|74025056|ref|XP_829094.1| hypothetical protein [Trypanosoma brucei TREU927] gi|70834480|gb|EAN79982.1| hypothetical protein, conserved [Trypanosoma brucei] Length = 411 Score = 40.5 bits (94), Expect = 0.29, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 7/75 (9%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSA 107 +++ V+ +RE YE+A+ + + F Y + P+ +A L A Sbjct: 178 NAIAQVQVEREAYEEALKEYESELFIY--RYLEQEIPASLPYGRLAA-VLYEIADCYMKE 234 Query: 108 GKYQQAASLGEEYIT 122 G ++ A E +I Sbjct: 235 GDFEGAE---ERFIK 246 >gi|261335044|emb|CBH18038.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 407 Score = 40.1 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 7/75 (9%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSA 107 +++ V+ +RE YE+A+ + + F Y + P+ +A L A Sbjct: 174 NAIAQVQVEREAYEEALKEYESELFIY--RYLEQEIPASLPYGRLAA-VLYEIADCYMKE 230 Query: 108 GKYQQAASLGEEYIT 122 G ++ A E +I Sbjct: 231 GDFEGAE---ERFIK 242 >gi|168210749|ref|ZP_02636374.1| tetratricopeptide repeat protein [Clostridium perfringens B str. ATCC 3626] gi|170711194|gb|EDT23376.1| tetratricopeptide repeat protein [Clostridium perfringens B str. ATCC 3626] Length = 473 Score = 40.1 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 44/142 (30%), Gaps = 14/142 (9%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAF---- 102 +++ +++Y K KE+ + A + F + + F+ S L + Sbjct: 338 ENLMKTDGVKDLYLKGSDLFKEKKYEDALKDFEKA---YAFSS---DSYLRPHLIYFMGT 391 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + K +A +EY+ Y + + Y + + +Y Sbjct: 392 SYENLDKNTEAIKYFQEYLKDYKAKPDAEDFMY-TPQCLYNLAILYNKEGNNA-ESKKYA 449 Query: 163 SRIVERYTNSPYVKGARFYVTV 184 I Y N+ + + Sbjct: 450 QEIENDYPNTMFYNDVTKKIIY 471 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 6/73 (8%) Query: 200 YLKRGEYVAAIPRFQLVLANY---SDAE---HAEEAMARLVEAYVALALMDEAREVVSLI 253 Y + AI FQ L +Y DAE + + + L Y E+++ I Sbjct: 393 YENLDKNTEAIKYFQEYLKDYKAKPDAEDFMYTPQCLYNLAILYNKEGNNAESKKYAQEI 452 Query: 254 QERYPQGYWARYV 266 + YP + V Sbjct: 453 ENDYPNTMFYNDV 465 >gi|332881091|ref|ZP_08448759.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681003|gb|EGJ53932.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 831 Score = 40.1 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 8/84 (9%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +AV + + +A E F + P A L A+ Y+ +YQ+ + + Sbjct: 722 LYVEAVNLYNNRRYPEAVEAFTKFLEKVP--AHADAYRLR-AYSYYNLQQYQKVIADINQ 778 Query: 120 YITQ-YPESK----NVDYVYYLVG 138 + P YY++G Sbjct: 779 MESLGNPIDPILNNYRASCYYMIG 802 >gi|312882599|ref|ZP_07742339.1| tol-pal system protein YbgF [Vibrio caribbenthicus ATCC BAA-2122] gi|309369759|gb|EFP97271.1| tol-pal system protein YbgF [Vibrio caribbenthicus ATCC BAA-2122] Length = 253 Score = 40.1 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 47/127 (37%), Gaps = 15/127 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ ++R + + Y +S + + +++ G+ Y Sbjct: 140 YQNAVDLILEKRDYTGAIAAFQAFQKNYPDSNFTPNSHYWL--------------GQLYF 185 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A+ F V+A Y D+ +A+ +L + + ++A++ + YP Sbjct: 186 AKKQDKEAVKSFAAVVA-YKDSVKRADALVKLGDIAMRNNNEEQAKKYYQQVVSEYPNSS 244 Query: 262 WARYVET 268 A + Sbjct: 245 SAELAKK 251 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 50/129 (38%), Gaps = 14/129 (10%) Query: 57 QREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ Y+ AV L++++++ A F +++P + S + ++ + ++A Sbjct: 136 EKTAYQNAVDLILEKRDYTGAIAAFQAFQKNYPDSNFTPNSHYWLGQLYFAKKQDKEAV- 194 Query: 116 LGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + + Y +S +G D+ + +Y ++V Y NS Sbjct: 195 --KSFAAVVAYKDSVKRADALVKLG--------DIAMRNNNEEQAKKYYQQVVSEYPNSS 244 Query: 174 YVKGARFYV 182 + A+ + Sbjct: 245 SAELAKKNL 253 Score = 35.1 bits (80), Expect = 9.9, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 3/71 (4%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L++ +Y AI FQ NY D+ + L + Y A EA + + + Y Sbjct: 148 LEKRDYTGAIAAFQAFQKNYPDSNFTPNSHYWLGQLYFAKKQDKEAVKSFAAVVA-YKDS 206 Query: 261 YWARYVETLVK 271 + + LVK Sbjct: 207 V--KRADALVK 215 >gi|257095754|ref|YP_003169395.1| tol-pal system protein YbgF [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048278|gb|ACV37466.1| tol-pal system protein YbgF [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 264 Score = 40.1 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 22/115 (19%) Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +P+S YY +G ++ + R K + +V ++ +P A Sbjct: 172 ARAHPDSALTPSAYYWLGNAHYAL--------RDCKKAIDAHRVVVAKWPANPKAPDALL 223 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 V + +LA + A + ++A Y D+ A A RL + Sbjct: 224 NVATCQQELAD-----AK---------GAKGTLEALVAKYPDSTAATTARQRLKK 264 >gi|254490096|ref|ZP_05103288.1| type IV pilus biogenesis/stability protein PilW [Methylophaga thiooxidans DMS010] gi|224464684|gb|EEF80941.1| type IV pilus biogenesis/stability protein PilW [Methylophaga thiooxydans DMS010] Length = 256 Score = 40.1 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 29/273 (10%), Positives = 73/273 (26%), Gaps = 59/273 (21%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K + + + L D + + +++ +++ A E Sbjct: 1 MSKGVQSWVLMVVILALTACNTTGGTRPEY-VAPDPKAAEINMRLGLNYMQRGDYAIALE 59 Query: 79 YFNQCSRDFPF--AGVARKSLL-------MSAFVQY-----SAGKYQQA----------- 113 + + P + +LL A + A +Y +A Sbjct: 60 KLQKALKQNPNLPSAHNTIALLHQRLGEDDKAEAHFLEAVERAPEYSEAQNNFGVFLCQQ 119 Query: 114 ---ASLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 ++ P + G+ I D T+ Y + ++ Sbjct: 120 GRYQDAETRFLKAVENPLYNSKAMALENAGLC-VNRIPD-------TEKAESYFRKALQI 171 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + + + + E + YL+ Y I R+Q + + Sbjct: 172 QPT---LTKSLLQMATI-----SYEQQS---YLQARAY---IQRYQ------QASSWTPQ 211 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 ++ ++ L D +++ R+P Sbjct: 212 SLFLAIKTENKLNDQDAVSSYSLILRSRFPDSD 244 >gi|213962754|ref|ZP_03391015.1| tetratricopeptide TPR_2 repeat protein [Capnocytophaga sputigena Capno] gi|213954749|gb|EEB66070.1| tetratricopeptide TPR_2 repeat protein [Capnocytophaga sputigena Capno] Length = 412 Score = 40.1 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 79/229 (34%), Gaps = 31/229 (13%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 + + + T + + A ++++++ +A + F + +P + + ++ Sbjct: 202 KAGTHEKARVEKTPSKRADIIKNIAFIYVEQKKVDEAIKAFEDAKKAYP-----KDANII 256 Query: 100 SAFV--QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 A ++ L +E P + ++ +Y +G+ Q Q Sbjct: 257 LAEANVYLQLDNKEKFKQLMQEAAQLDPNNADL---HYNIGVINMQ--------QGNILE 305 Query: 158 MLQYMSRIVERYTNSPYVKGAR----------FYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 + + ++ N Y A + N+L + +I ++ R + Sbjct: 306 ARKGFEQALKIKPN--YADAALNISTTYINEGNGLIEQMNKLGNSKADIAKFEALRDQKD 363 Query: 208 AAIPRFQLVLANYSDAE-HAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + VL NY+ A + E + +L Y AL + V L+ + Sbjct: 364 GLFKKGAEVLENYTKANGNVENILEQLKNIYGALGDSANFQRVKKLLGQ 412 >gi|325840872|ref|ZP_08167207.1| diguanylate cyclase (GGDEF) domain protein [Turicibacter sp. HGF1] gi|325490129|gb|EGC92467.1| diguanylate cyclase (GGDEF) domain protein [Turicibacter sp. HGF1] Length = 650 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 28/202 (13%), Positives = 64/202 (31%), Gaps = 26/202 (12%) Query: 9 ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68 + + + K +++ + + S L+ V D Y +A L Sbjct: 139 LAEKNVSKFYMTKLKSSLYRRFSQGIVDFSSNPQSSIPLLEFVIDKNVNEYDYLEAHRLL 198 Query: 69 K-----EQNFSKAYEYFNQCSRDFPFAGV---ARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + K+ Y R + + + + G Y+QA S+ E Sbjct: 199 TNVYLLSGYYEKSIMYLLDAYRVSVWNDYKIIQEEVSIKLGQAYFLNGDYEQAISILE-- 256 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +P +K D+ +SY + + + +++++ V S + Sbjct: 257 -SLFPRNKKDDF------ISYIPQLVESYRVVQGYDKAIEFLNDYV-----SQLSVESSE 304 Query: 181 YVTV----GRNQLAAKEVEIGR 198 ++ R LA E ++ Sbjct: 305 WLDFWYTWIRASLAINEGKVAE 326 >gi|297848776|ref|XP_002892269.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata] gi|297338111|gb|EFH68528.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata] Length = 809 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 51/158 (32%), Gaps = 17/158 (10%) Query: 14 AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73 WAY L + + + ++ +V + R+ + T R + + + Sbjct: 305 QWAYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCPTHFRALKLL---GSALFGVGEY 361 Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A + + A + A +S G+ ++A + + I P + Sbjct: 362 RAAVKALE--EAIYLKPDYA-DAHCDLASSLHSMGEDERAIEVFQRAIDLKPGHVD---A 415 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 Y +G Y D + + +R++ + N Sbjct: 416 LYNLGGLYM--------DLGRFQRASEMYTRVLAVWPN 445 >gi|254442097|ref|ZP_05055573.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] gi|198256405|gb|EDY80713.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] Length = 506 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 43/122 (35%), Gaps = 8/122 (6%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-- 97 ++ T + +Y+ AV + N+ +A F + + + Sbjct: 338 TSAADSSTTAETTGDELELSLYDSAVAAYEAGNYDEAIPLFWELL-----GENSNDAQAW 392 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + Y + A S E + P S+ + + YL+ + Q I V + +A +L Sbjct: 393 FRLSQAYYMQNNWYDAESTILEAKRRAPRSEVIAH-QYLLTIRNTQNITSVLEEIKALRL 451 Query: 158 ML 159 + Sbjct: 452 LF 453 >gi|46136823|ref|XP_390103.1| hypothetical protein FG09927.1 [Gibberella zeae PH-1] Length = 613 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 46/141 (32%), Gaps = 20/141 (14%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDF 87 ++ +G ++ + D Y +A + + + A + + + +DF Sbjct: 367 SISLELGEPEKAEAEFAKALEQDKNDPDVYYHRAQAHFIKGDLADAQKDYQKSIDLDKDF 426 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 F+ + QY G + + I +P+ +V Y YY + Sbjct: 427 IFSH------IQLGVTQYKMGSIASSMATFRRCIKNFPKVPDV-YNYY----------GE 469 Query: 148 VPYDQRATKLMLQYMSRIVER 168 + DQ ++ +E Sbjct: 470 LLLDQGNFSEAVEKFDTAMEM 490 >gi|315646851|ref|ZP_07899966.1| TPR domain protein [Paenibacillus vortex V453] gi|315277781|gb|EFU41105.1| TPR domain protein [Paenibacillus vortex V453] Length = 865 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 14/123 (11%), Positives = 41/123 (33%), Gaps = 17/123 (13%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRD-FPFAGVARKSLLMSAFVQYSA 107 + D + Q +E + +A + F+ R+ P+A AF ++ Sbjct: 554 KLDDDKGQEHYFEYGSALRLNGQYREAVQIFDADIERNNHPYAYY------NRAFARFML 607 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +++ + ++ P D + G+S + + + + + +++ Sbjct: 608 KEFELCRADLRIFMELVPGDSQFD-ANLISGISSFYL--------KDWNAAVSFFNEMLK 658 Query: 168 RYT 170 Sbjct: 659 YLP 661 >gi|319761242|ref|YP_004125179.1| tetratricopeptide tpr_1 repeat-containing protein [Alicycliphilus denitrificans BC] gi|317115803|gb|ADU98291.1| Tetratricopeptide TPR_1 repeat-containing protein [Alicycliphilus denitrificans BC] Length = 734 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 14/103 (13%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + LK ++ +A F+Q P A +L+ + ++ QA + + I Sbjct: 187 NRGNALLKSRHLLEAVASFDQALALQP--QYA-DALVNRGNARLQRKEHAQAFADLDRAI 243 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 P D Q++ + D + + LQ R Sbjct: 244 RLNP-----DQAQ------SRQLMGTLLRDSKRHEEALQEFQR 275 >gi|298372614|ref|ZP_06982604.1| tetratricopeptide repeat (TPR) family protein [Bacteroidetes oral taxon 274 str. F0058] gi|298275518|gb|EFI17069.1| tetratricopeptide repeat (TPR) family protein [Bacteroidetes oral taxon 274 str. F0058] Length = 672 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 21/154 (13%), Positives = 49/154 (31%), Gaps = 30/154 (19%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K L++F ++ + + G + + ++ A + Sbjct: 2 MKKTILSLFVAVNITLVCG----------------QVNTEHLMRVGNNAMYFNDYVLAIQ 45 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 YFN+ P ++ + AF + S Y A + I +++ + + YY G Sbjct: 46 YFNKVINAKP---YIEQAYMYRAFAKISLEDYNGALDDLDRAIA---KNQFIPHAYYARG 99 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 Y ++ S+ +E + Sbjct: 100 YVYNRL--------GEYAKAESDFSKALELSPEN 125 >gi|42522225|ref|NP_967605.1| hypothetical protein Bd0635 [Bdellovibrio bacteriovorus HD100] gi|39574756|emb|CAE78598.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100] Length = 223 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 11/98 (11%), Positives = 36/98 (36%), Gaps = 11/98 (11%) Query: 93 ARKSL---LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 A+++ +A + ++Q+ ++Y + P+ Y +G+S+ ++ Sbjct: 134 AKQAKRDAFEAAQEFFGKKDWKQSILNFQKYRDENPKGPKFADATYKIGVSFQEL----- 188 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 + +V ++ S + A+ + + Sbjct: 189 ---GMKDEAKTFYDEVVSKFPKSEEARRAKIRLKGLKK 223 >gi|327540348|gb|EGF26934.1| hypothetical protein RBWH47_03973 [Rhodopirellula baltica WH47] Length = 903 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 68/226 (30%), Gaps = 37/226 (16%) Query: 61 YEKAVLFLKEQNFSKAYE-YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y+ AV + + A ++ R + + + Q + G Y A E Sbjct: 65 YDDAVQQFRNGQYDAAATTAASEVER----GVWSERWPRLLIQCQLTQGDYADALQTYRE 120 Query: 120 YITQYPESKNVDYVYYLVGMS---YAQMIRDVPYDQRATKLMLQ-YMSRIVERY------ 169 + +YP S + Y+ G+ + + +V + +Q + + R Sbjct: 121 ALQRYPTSIALRYM----GLDVLRFNGLHDEVGTAEADLFAQMQRAFAGYITRDNLIAAG 176 Query: 170 ----TNSPYVKGARFYV---------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + LA E+ I ++G++ A Q Sbjct: 177 RFLTGRGEDARKVLEMFYDRVRDRDPDYLDAYLATAELAI-----RKGDFQVAANTLQQA 231 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 L + +A+ +E+ A ++ + + + P W Sbjct: 232 LKLEEETPDLHHLLAKAMESSDGQAATEQIAIALRINPQHLPSLQW 277 >gi|238881088|gb|EEQ44726.1| conserved hypothetical protein [Candida albicans WO-1] Length = 978 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 38/130 (29%), Gaps = 25/130 (19%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109 D Y + + +F+ AYE F Q P + Y + Sbjct: 358 DQSDAHSWYYLGRVEMIRGDFTAAYEAFQQAVNRDARNP-TFWC-----SIGVLYYQISQ 411 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIV 166 Y+ A I P + V+Y +G Y I D L + Sbjct: 412 YRDALDAYTRAIRLNP---YISEVWYDLGTLYETCNNQISD----------ALDAYRQAE 458 Query: 167 ERYTNSPYVK 176 N+P++K Sbjct: 459 RLDPNNPHIK 468 >gi|146281535|ref|YP_001171688.1| putative lipoprotein [Pseudomonas stutzeri A1501] gi|145569740|gb|ABP78846.1| lipoprotein, putative [Pseudomonas stutzeri A1501] gi|327479712|gb|AEA83022.1| putative lipoprotein [Pseudomonas stutzeri DSM 4166] Length = 125 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 30/92 (32%), Gaps = 13/92 (14%) Query: 98 LMSAFVQYSAGKYQ---QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 L A+ Y A + Q+ S E P S+ + L G + Q Sbjct: 26 LDEAYRHYEADNCERVMQSLSQAER--RSKPRSQAQPEISLLRGQCLER--------QGL 75 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + I+ER+ S Y AR + R Sbjct: 76 FVDAAETYRFIIERFPASEYAYRARARLETLR 107 >gi|197118045|ref|YP_002138472.1| TPR domain-containing protein [Geobacter bemidjiensis Bem] gi|197087405|gb|ACH38676.1| TPR domain lipoprotein [Geobacter bemidjiensis Bem] Length = 250 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 47/128 (36%), Gaps = 16/128 (12%) Query: 62 EKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + +L + + +A N+ ++ + + L V ++ K + A ++ Sbjct: 138 NLGLAYLGKGEYQQALTVLRNEVGKN--GSD--PRIRLNLGRVYFALQKNELAVEEYQKA 193 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +++ YY +G++ ++ + +V +S + +R Sbjct: 194 LQL---NRSYASAYYHLGLAQMKL--------KDADAAKSAFQDVVRLAPDSEIGQLSRE 242 Query: 181 YVTVGRNQ 188 Y+ + + + Sbjct: 243 YLELLKVR 250 >gi|15921045|ref|NP_376714.1| hypothetical protein ST0810 [Sulfolobus tokodaii str. 7] gi|15621829|dbj|BAB65823.1| 661aa long hypothetical protein [Sulfolobus tokodaii str. 7] Length = 661 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 14/76 (18%) Query: 68 LKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY--ITQY 124 L ++N+ +A +YF R F+ +L A AG+Y++A L EE I + Sbjct: 245 LGKKNYKEAVKYFEEALKRRRDFSN-----MLTLAHAYILAGEYKKALDLIEEAEKIRRN 299 Query: 125 PESKNVDYVYYLVGMS 140 +S YL G++ Sbjct: 300 AQSA------YLKGLA 309 >gi|88704866|ref|ZP_01102579.1| conserved hypothetical protein [Congregibacter litoralis KT71] gi|88701187|gb|EAQ98293.1| conserved hypothetical protein [Congregibacter litoralis KT71] Length = 513 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 41/120 (34%), Gaps = 25/120 (20%) Query: 60 VYEKAVLFLKE-----QNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 +Y A + +A + + RK+LL A S GK Q Sbjct: 189 LYTDAFNDIGNLLNDMGKHEEAIKAYESALNIEPRH------RKALLNLALSYSSMGKPQ 242 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A +L +E I PE + L G++ A + D +QY+ R++ Sbjct: 243 LAIALYQELIEMQPEDRRT-----LSGIANALLALGRDKD------AIQYLERLLRLNPE 291 >gi|152993345|ref|YP_001359066.1| hypothetical protein SUN_1762 [Sulfurovum sp. NBC37-1] gi|151425206|dbj|BAF72709.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 282 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 46/146 (31%), Gaps = 11/146 (7%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 ++ S ++Y + V ++ +++A + F + A L Sbjct: 148 KEKSTKSTDSESLGKSSNAKLYSEGVRLFNKKRYNEAKKRFTITDSKG-YKPAASNYYLG 206 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y KY A ++ Y ++ +D + G+S + + Sbjct: 207 EI-AYY-TKKYDDAIFYFKKSAGLYDQASYIDTLLLHTGISLEKT--------GEKEQAR 256 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVG 185 + I+E Y+ K A+ + Sbjct: 257 AFYKNIIENYSGKKSAKIAKDRLKKL 282 >gi|114778369|ref|ZP_01453216.1| Spermine synthase [Mariprofundus ferrooxydans PV-1] gi|114551332|gb|EAU53889.1| Spermine synthase [Mariprofundus ferrooxydans PV-1] Length = 946 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 37/126 (29%), Gaps = 10/126 (7%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++E L ++E ++ A F R P +G A Sbjct: 812 TPAALHEFGYLLMREGWYADAIAVFKYVLRQDPEHRYTA---FNLGACYEYSGDLPAALR 868 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-SPY 174 EE P+ +V Y +G Y + R Q + K L M + Y Sbjct: 869 AYEEAGRVEPDDADVP---YRIGRVYVKQGR-FDDAQASLKHALALMGE--NGRPDIYRY 922 Query: 175 VKGARF 180 + A Sbjct: 923 LAKAYE 928 >gi|77735597|ref|NP_001029494.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Bos taurus] gi|108935840|sp|Q9TRY0|FKBP4_BOVIN RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP4; Short=PPIase FKBP4; AltName: Full=52 kDa FK506-binding protein; Short=52 kDa FKBP; Short=FKBP-52; AltName: Full=FK506-binding protein 4; Short=FKBP-4; AltName: Full=HSP-binding immunophilin; Short=HBI; AltName: Full=Immunophilin FKBP52; AltName: Full=Rotamase; Contains: RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed gi|74354621|gb|AAI02457.1| FK506 binding protein 4, 59kDa [Bos taurus] gi|146231792|gb|ABQ12971.1| FK506-binding protein 4 [Bos taurus] Length = 459 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 14/140 (10%), Positives = 43/140 (30%), Gaps = 26/140 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFA-----GVARKSL-------LMSAFVQYSAGK 109 E+ ++ KE + +A + + + A K+ L A Sbjct: 275 ERGTVYFKEGKYKQAVLQYKKIVSWLEYESSFSDEDAEKAQALRLASHLNLAMCHLKLQA 334 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + D ++++ Y Sbjct: 335 FSAAIENCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 383 Query: 170 TNSPYVKGARFYVTVGRNQL 189 ++ A+ + V + ++ Sbjct: 384 PSNK---AAKAQLVVCQQRI 400 Score = 35.9 bits (82), Expect = 6.5, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 2/78 (2%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYF 80 L ++A+C L ++ + ++ D ++ ++ + L +F A F Sbjct: 317 LRLASHLNLAMCHLKLQAFSAAIENCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADF 376 Query: 81 NQCSRDFPFAGVARKSLL 98 + + +P + A K+ L Sbjct: 377 QKVLQLYP-SNKAAKAQL 393 >gi|73667569|ref|YP_303584.1| hypothetical protein Mbar_A0011 [Methanosarcina barkeri str. Fusaro] gi|72394731|gb|AAZ69004.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 1138 Score = 40.1 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 64/198 (32%), Gaps = 38/198 (19%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLG 117 +Y++ +F A +++ P K FV Y KYQQA Sbjct: 859 IYKQGKALENSGDFEGAVGCYDRILELDPGNVGAYNNK-----GFVLYKLEKYQQAIDCY 913 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 ++ + P++ +Y G +Y + + K L ++ V+ + Sbjct: 914 DKALEYSPDNVT---AWYFQGCTYLTLSSN--------KAALNCFNKTVQLKPDCI---T 959 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A + N + E A+ + VLA ++ A+ A Sbjct: 960 AWYNKGYIHNMMGETE--------------EAVSCYDNVLAISPNSPS---ALYNKRFAL 1002 Query: 238 VALALMDEAREVVSLIQE 255 L +DEA + + E Sbjct: 1003 YTLKKLDEAAACKAKLDE 1020 >gi|321478547|gb|EFX89504.1| hypothetical protein DAPPUDRAFT_303263 [Daphnia pulex] Length = 712 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 37/93 (39%), Gaps = 7/93 (7%) Query: 52 TDVRYQREVYEK--AVLFLKEQNFSKAYEYFNQCSRDFP---FAGVARKSLLMSAFVQYS 106 V Y+ ++ + + + + A + S + ++ SLL A+ Y Sbjct: 278 PHVWYEAALFLQISTKTLSDKGDVTAAKNLAEEVSNIYERSINGPMSHNSLLYFAYADYE 337 Query: 107 AG--KYQQAASLGEEYITQYPESKNVDYVYYLV 137 G KY +A + +Y+ Q+ + Y+ Y+ Sbjct: 338 EGRIKYDKAHQIYTKYLEQHDIDPTLGYIQYMR 370 >gi|262376182|ref|ZP_06069412.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] gi|262308783|gb|EEY89916.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] Length = 265 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 6/78 (7%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G +A + + +I P S + Y+ ++ + D P + Sbjct: 159 YKNGGAAKAIAPMQNFIKNNPNSVYISNAYFW--LAEFNLAIDPPK----FDEAKRNYLI 212 Query: 165 IVERYTNSPYVKGARFYV 182 +V+RY NS A + + Sbjct: 213 VVDRYPNSAKASTALYQL 230 >gi|254482621|ref|ZP_05095859.1| tetratricopeptide repeat domain protein [marine gamma proteobacterium HTCC2148] gi|214036980|gb|EEB77649.1| tetratricopeptide repeat domain protein [marine gamma proteobacterium HTCC2148] Length = 749 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 9/72 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY--SAGKYQQAASLG 117 VY A+ L N +A N+ +R FP ++ A Y G Y +A + Sbjct: 674 VYAIALHDL--GNPRQAVTELNKLNRKFPSDE-----QILLALANYSAELGDYAKARAYA 726 Query: 118 EEYITQYPESKN 129 ++ + P + N Sbjct: 727 QQLVQLAPRNTN 738 >gi|163747409|ref|ZP_02154761.1| TPR-domain containing protein [Oceanibulbus indolifex HEL-45] gi|161379262|gb|EDQ03679.1| TPR-domain containing protein [Oceanibulbus indolifex HEL-45] Length = 166 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 24/75 (32%), Gaps = 11/75 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR----KSLLMSAFVQYSAGKYQQAAS 115 + + + + + +A E+ + P A ++ Y A Y A Sbjct: 68 LLARGREAMADGDPRQAIEHLTALTDHAP--DFAEGFHTRAQ-----AYYGADLYGPALD 120 Query: 116 LGEEYITQYPESKNV 130 E + P++ N Sbjct: 121 DLERTLALNPDNYNA 135 >gi|119593819|gb|EAW73413.1| hypothetical protein FLJ20699, isoform CRA_b [Homo sapiens] Length = 404 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 45/150 (30%), Gaps = 29/150 (19%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYE 78 L+G D LD + +++ AV NF KA E Sbjct: 5 MATGLVLIGTGSSVKLDKELDLAVKTMVEISRTQPLTRREQLHVSAVETFANGNFPKACE 64 Query: 79 YFNQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDY 132 + Q +D P M A + G +Q YP + ++ Sbjct: 65 LWEQILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPL 113 Query: 133 VYYLVGMSYAQMIRDVPYDQ--RATKLMLQ 160 Y+ G+ ++ YDQ + K L Sbjct: 114 SSYVKGIYSFGLMETNFYDQAEKLAKEALS 143 >gi|119476362|ref|ZP_01616713.1| hypothetical protein GP2143_07924 [marine gamma proteobacterium HTCC2143] gi|119450226|gb|EAW31461.1| hypothetical protein GP2143_07924 [marine gamma proteobacterium HTCC2143] Length = 635 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 44/133 (33%), Gaps = 23/133 (17%) Query: 21 KFALTIFFSIAVCFLV---GWERQSSRDVYLDSVTDVRYQ-REVYEK----AVLFLKEQN 72 + L +F + L GW V L T + +++++ + +++ + Sbjct: 311 RGPLLVFLILPFALLAFRRGWLLVLPLVVILQPETGHALEWEDLWQRPDQRGEVAMQQGD 370 Query: 73 FSKAYEYFN----QCSRDFPFAGV----ARKSLLMSAFVQY-------SAGKYQQAASLG 117 +A YF + S D+ A A Y +GK +A Sbjct: 371 PEQAARYFEHKQWRASADYRSGNYKGATAGFGQEEDADAHYNLGNSLAKSGKLDEAIDAY 430 Query: 118 EEYITQYPESKNV 130 E + Q P ++ Sbjct: 431 ENALEQQPTMEDA 443 >gi|295094234|emb|CBK83325.1| Protein kinase domain. [Coprococcus sp. ART55/1] Length = 711 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 64/176 (36%), Gaps = 30/176 (17%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + + A C ++G ++ + D+ Y +V +A + E +++KA+E Sbjct: 286 FSVVAGLSILSACCAVIGGVKKG-------QLKDLDYNNKV-NEARDAVDEGDYNKAFEC 337 Query: 80 FNQCSRDFPFAGVARKSLL--MSAFVQYSAGK----YQQAASLGEEYITQYPESKN--VD 131 + P A + + M + Y + E+ I ++K+ D Sbjct: 338 YKAAVDIDPT---ASDAYIGYMETYAYYYTEDDGNTSANTETAAEKGIRLALKNKDEIKD 394 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE--RYTNSPYVKGARFYVTVG 185 V + + M Y ++D +Y + + E + + K A++Y + Sbjct: 395 DVKFKIAMLYYDEVKDYS-------AAKKYFNMVDESKDFPDQ--AKQAKYYAAIC 441 >gi|149192089|ref|ZP_01870313.1| hypothetical protein VSAK1_00450 [Vibrio shilonii AK1] gi|148834075|gb|EDL51088.1| hypothetical protein VSAK1_00450 [Vibrio shilonii AK1] Length = 262 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 44/152 (28%), Gaps = 30/152 (19%) Query: 84 SRDFPFAGVARKSLLMSAFVQ-----YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 P + + +A+ Y A +++ YP S + +Y +G Sbjct: 130 DSTAPQGKFSTDADEQTAYQNAVDLILKKRDYAGAIEAFKQFQKDYPNSTFMPNTHYWLG 189 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 Y +D + ++ + S A + Sbjct: 190 QLYFAKRQDS--------EAEKSFKAVL-GFKESNKRADALVKLGDL------------- 227 Query: 199 YYLKRGEYVA-AIPRFQLVLANYSDAEHAEEA 229 KRG A A ++ V+A Y + A+ A Sbjct: 228 --AKRGNKAAEAKKYYEQVIAEYPGSSSAKVA 257 Score = 35.9 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 49/130 (37%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R ++ + + Y NS ++ +++ G+ Y Sbjct: 148 YQNAVDLILKKRDYAGAIEAFKQFQKDYPNSTFMPNTHYWL--------------GQLYF 193 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A F+ VL + ++ +A+ +L + EA++ + YP Sbjct: 194 AKRQDSEAEKSFKAVL-GFKESNKRADALVKLGDLAKRGNKAAEAKKYYEQVIAEYPGSS 252 Query: 262 WARYVETLVK 271 A+ ++ +K Sbjct: 253 SAKVAQSNLK 262 >gi|123975181|ref|XP_001330228.1| TPR Domain containing protein [Trichomonas vaginalis G3] gi|121896222|gb|EAY01380.1| TPR Domain containing protein [Trichomonas vaginalis G3] Length = 705 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 33/230 (14%), Positives = 64/230 (27%), Gaps = 35/230 (15%) Query: 33 CFLVGWERQSSRDVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 C + +RD YL+++ + +Y V+ + +A + F + +R P Sbjct: 390 CLMQSNHEDEARDQYLEAIGVEADCVEALYNLGVVSKMMGQYEEALQVFEKLNRIIP--- 446 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 A + + AG A I P+ + + ++ D Sbjct: 447 KAPEVAFEISDCYEKAGFNTNAIEWLHRLINIQPKDPAI----------WRRLGAIWDRD 496 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q Q E Y Y + G Y+ K+ Y A+ Sbjct: 497 QNEA----QAFQCYTESY---KYCPSDIDVIQWL-----------GSYFRKKQSYDQALK 538 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 F+ A + + + + EA + + P Sbjct: 539 FFERASEL---APKQPRYLMMVASCHRNMDQKQEALTTYEKVMQLDPNNK 585 >gi|317058938|ref|ZP_07923423.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R] gi|313684614|gb|EFS21449.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R] Length = 145 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 8/76 (10%) Query: 70 EQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 ++++ A +F + A+V Y KY++A E+ + P S Sbjct: 11 KKDYDTAIYFFEKLMTLDATNGNWPGF----LAYVYYEQEKYEKAIPYFEKSVDLSPNSP 66 Query: 129 NVDYVYYLVGMSYAQM 144 + Y+L+G SY+++ Sbjct: 67 FI---YFLLGNSYSRL 79 >gi|149633879|ref|XP_001512545.1| PREDICTED: similar to ubiquitously transcribed tetratricopeptide repeat, X chromosome [Ornithorhynchus anatinus] Length = 1373 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 24/196 (12%), Positives = 50/196 (25%), Gaps = 54/196 (27%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 80 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 126 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 127 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 186 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEA-----MARLVEAYVALALMDEAREVV-SL 252 Y + +Y +A ++ +L + +A + + L Sbjct: 187 LYETQRKYHSAKEAYEQLLQT-ENLPAQVKATVLQQLGWMHHTVDQLGDKATKESYAIQY 245 Query: 253 IQERY---PQG--YWA 263 +Q+ P W Sbjct: 246 LQKSLEADPNSGQSWY 261 >gi|322505183|emb|CAM45400.2| putative intraflagellar transport protein IFT88 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 810 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 65/226 (28%), Gaps = 48/226 (21%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-- 110 + +Y + K + +A F + ++L+ S V Y Sbjct: 507 EADNVEAIYNLGLAAKKLGLYEEAVRTFKR-----------MQALVDSNEVLYQIADLSD 555 Query: 111 ----QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 A I + P N +G YA+ DV Y Sbjct: 556 LVGDPSALEWFNRLIGRVPTDPN---ALARIGSLYARDGDDV--------QAFHYYLEAY 604 Query: 167 ERY--------------TNSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 Y + A + + Q ++ + + +RG+YV A Sbjct: 605 RYYQVNMDVISWLGAYFVKNEVYDRAVQFFERASHIQPQEVKWQLMVASCHRRRGDYVQA 664 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 ++ + Y D E + LV+ L +EA E +++ Sbjct: 665 KRLYEQLHRKYPD---NVECLNYLVQLCKDAGLNEEANEWFKTMKK 707 Score = 35.5 bits (81), Expect = 7.3, Method: Composition-based stats. Identities = 29/208 (13%), Positives = 66/208 (31%), Gaps = 43/208 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFN---QCSR-----DFPFAGVARKSLLMSAFV-------QYS 106 E A+L L+ +++ A E + R + + + + QY Sbjct: 144 ESAMLALQ-KDYGAALEKAKDAGKLERSLCKKREQYG-FVEQINVDLTYAVHFNLAVQYQ 201 Query: 107 AGK-YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + Y +A + I V + + ++ Q+ L ++ ++ Sbjct: 202 NHQLYTEALNTYNLIIRN---------VQFPQAGRLRVNMGNIYLAQQNYLLAIKMYRKV 252 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 ++ G + RN I ++K G+Y A ++ V+ D Sbjct: 253 LDETP----TAGKELRYHLCRN--------IANAFVKLGQYRDAANSYETVVEGNGDVNA 300 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLI 253 L+ Y AL ++ + + + Sbjct: 301 T----YNLILCYYALGETEQMKRTFTRL 324 >gi|293376886|ref|ZP_06623104.1| diguanylate cyclase (GGDEF) domain protein [Turicibacter sanguinis PC909] gi|292644496|gb|EFF62588.1| diguanylate cyclase (GGDEF) domain protein [Turicibacter sanguinis PC909] Length = 650 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 28/202 (13%), Positives = 64/202 (31%), Gaps = 26/202 (12%) Query: 9 ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68 + + + K +++ + + S L+ V D Y +A L Sbjct: 139 LAEKNVSKFYMTKLKSSLYRRFSQGIVDFSSNPQSSIPLLEFVIDKNVNEYDYLEAHRLL 198 Query: 69 K-----EQNFSKAYEYFNQCSRDFPFAGV---ARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + K+ Y R + + + + G Y+QA S+ E Sbjct: 199 TNVYLLSGYYEKSIMYLLDAYRVSVWNDYKIIQEEVSIKLGQAYFLNGDYEQAISILE-- 256 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +P +K D+ +SY + + + +++++ V S + Sbjct: 257 -SLFPRNKKDDF------ISYIPQLVESYRVVQGYDKAIEFLNDYV-----SQLSVESSE 304 Query: 181 YVTV----GRNQLAAKEVEIGR 198 ++ R LA E ++ Sbjct: 305 WLDFWYTWIRASLAINEGKVAE 326 >gi|225619179|ref|YP_002720405.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] gi|225213998|gb|ACN82732.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] Length = 467 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 50/154 (32%), Gaps = 31/154 (20%) Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 L + Y +Y A +E + P + + + Sbjct: 140 LEIGIIYYENKQYDTAIKYFDEALDVQPNNSE---ALKYKAFCFVNI--------GNFND 188 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + M+ I +++ + P L + GR Y R +Y AI + Sbjct: 189 AISGMNNIYKKFPDDP---------------LLNYNM--GRAYRGREDYKTAIRYYSN-- 229 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 +Y D E++ ++ + Y+ L ++ A + + Sbjct: 230 -SYKDKEYSVRSLYEMGLCYIKLENIESAIKTLE 262 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 68/205 (33%), Gaps = 45/205 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E +++ + + + A +YF++ P A K AF + G + A S Sbjct: 141 EIGIIYYENKQYDTAIKYFDEALDVQPNNSEALKYK---AFCFVNIGNFNDAISGMNNIY 197 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS----PYVKG 177 ++P+ + M R + + Y+NS Y Sbjct: 198 KKFPDDP----------LLNYNMGR--------AYRGREDYKTAIRYYSNSYKDKEYSVR 239 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL--ANYSDAEHAEEAMARLVE 235 + + + + Y+K +AI + + +Y D E + L E Sbjct: 240 SLYEMGLC--------------YIKLENIESAIKTLEKAISYDSY-DKELNLAILYTLSE 284 Query: 236 AYVALALMDEAREVVS---LIQERY 257 Y + ++++ E++ ++ Y Sbjct: 285 CYDIVGNINKSMEILESVIVMDPNY 309 >gi|261420022|ref|YP_003253704.1| hypothetical protein GYMC61_2632 [Geobacillus sp. Y412MC61] gi|319766836|ref|YP_004132337.1| hypothetical protein GYMC52_1763 [Geobacillus sp. Y412MC52] gi|261376479|gb|ACX79222.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. Y412MC61] gi|317111702|gb|ADU94194.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacillus sp. Y412MC52] Length = 1385 Score = 40.1 bits (93), Expect = 0.31, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +AV++L+E KA + P +AR++L++ G+YQ+AA+L E Y Sbjct: 1239 QAVVWLQEGQHEKAERQLEAIVAEEP---LAREALMLLGEQYMETGRYQEAAALWERYTD 1295 Query: 123 QYPESKNV 130 YPE + + Sbjct: 1296 WYPEDEEL 1303 >gi|326432936|gb|EGD78506.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818] Length = 858 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 64/199 (32%), Gaps = 47/199 (23%) Query: 107 AGKYQQAASLGEEYITQY-----PESKNVDYVYYLVGMSY-AQMIRDVPYDQRATKLMLQ 160 AG+Y A SL E + Y PE NV VY M+ + + Q + LQ Sbjct: 482 AGRYDHALSLFERSLNIYLERHGPEHANVAGVY--DAMAQVYESKGEHDRAQEYFQKSLQ 539 Query: 161 -YMSRIVERYT---------------NSPYVKGARFYVTVGR---NQLAAKEVEIG---- 197 + + E + N Y + +Y + + L K ++I Sbjct: 540 IALDTLGEEHPSTAGTYGKLGGVYESNGEYDRAIEYYQKSLKIQLDTLGEKHLDIATTYN 599 Query: 198 ---RYYLKRGEYVAAIPRFQLVLANYSDA-----EHAEEAMARLVEAYVALALMDEAREV 249 + Y +GEY AI + L Y + + A L Y + D A E Sbjct: 600 GLGQVYSSKGEYDRAIHYYHKCLQTYLETLGKKHPYTATAYNNLGLVYKSKGEHDHAVEY 659 Query: 250 VS--------LIQERYPQG 260 + E +P Sbjct: 660 FQQSLQIKLDTLGEEHPST 678 >gi|254448729|ref|ZP_05062187.1| peptidase M48, Ste24p [gamma proteobacterium HTCC5015] gi|198261737|gb|EDY86024.1| peptidase M48, Ste24p [gamma proteobacterium HTCC5015] Length = 550 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 68/193 (35%), Gaps = 26/193 (13%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-RKSLLMSAFVQY 105 + D E Y A L + N++ A ++ + +A + + + Q Sbjct: 366 FRDKSQGPLKPIERYTLAQLLTQNGNYASAQKHLDTLLEQHS-GELAFQLAQVRLDNAQ- 423 Query: 106 SAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 +YQ A E YP+ S VDY+ +R + T L+ Sbjct: 424 --KRYQSALKRLETLHQLYPQYSTVVDYM--------VTTLRHTQNFEAITDLLDSRYDS 473 Query: 165 IVERYTN---SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN-- 219 V+ + Y + + R+QLA +G YY+ Y AA + + L + Sbjct: 474 GVKDWPPQWLHSYAEALKAQQLQARSQLA-----LGEYYIATARYRAAGLQIEEALDSKE 528 Query: 220 --YSDAEHAEEAM 230 +E AE A+ Sbjct: 529 LGRQLSERAERAL 541 >gi|269119154|ref|YP_003307331.1| hypothetical protein Sterm_0526 [Sebaldella termitidis ATCC 33386] gi|268613032|gb|ACZ07400.1| hypothetical protein Sterm_0526 [Sebaldella termitidis ATCC 33386] Length = 505 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 27/81 (33%), Gaps = 1/81 (1%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 F +G +S + + + VY + N+ A + FN+ F Sbjct: 97 LFQLGDFSESKKIISPMLKGNEIIPEAVYLSGQIEYITGNYKGAEDLFNKLRMRN-FKDY 155 Query: 93 ARKSLLMSAFVQYSAGKYQQA 113 K+ + Y ++ +A Sbjct: 156 YLKAETGLLYTYYQTNQFNKA 176 >gi|253583598|ref|ZP_04860796.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] gi|251834170|gb|EES62733.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] Length = 470 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 13/133 (9%), Positives = 44/133 (33%), Gaps = 24/133 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQA 113 + ++ +A +F + ++D+ + + + YQ+A Sbjct: 354 SDGENSFNQGSYVEALVHFEKALSINKDY--------AETKDIYFYMGQSNFQLENYQKA 405 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 ++ + +YY +G++Y ++ + Y + + +++ S Sbjct: 406 IDNYKKALNIEKSDDKKAEIYYNMGIAYDKL--------GNKEESRNYFTFVRQKFPKSS 457 Query: 174 YVKGARFYVTVGR 186 + + Y+ Sbjct: 458 WSTKSSIYLLKLN 470 >gi|225851122|ref|YP_002731356.1| putative slei family protein [Persephonella marina EX-H1] gi|225645133|gb|ACO03319.1| putative slei family protein [Persephonella marina EX-H1] Length = 870 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 79/209 (37%), Gaps = 33/209 (15%) Query: 49 DSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFP------FAGVARKSLLMSA 101 + ++ EVY K A +F ++F AY Y+ + P + + A Sbjct: 407 EKAAALKEDPEVYRKMADIFFNRKDFKNAYRYYKKVLSLNPKMRKDILPNYIKSVKV-LA 465 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + Y+++ S EY++ YP + + + D+ + + Y Sbjct: 466 ERNFQNKNYRKSLSFYTEYLSVYPRDVKI-----------LEKVGDIYRLLGNKRTAISY 514 Query: 162 MSRIVERYTNSPYVK-GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 ++++ N Y + R +E+G Y GEY AI ++ L + Sbjct: 515 YEKVMKI--NRKYFDRNLSGKLLDLR-------LEMGDIYFANGEYEKAIYHYKKALV-F 564 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREV 249 SD+E E +L +AY+ + R++ Sbjct: 565 SDSEKLAE---KLAKAYIKMGDRYLKRKI 590 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 3/41 (7%) Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 Y Y+ A YI P++ VYYL G Y + Sbjct: 796 SYYRLKDYKNAIKDFSSYIKLDPDNPE---VYYLRGKLYYE 833 >gi|156744127|ref|YP_001434256.1| hypothetical protein Rcas_4211 [Roseiflexus castenholzii DSM 13941] gi|156235455|gb|ABU60238.1| TPR repeat-containing protein [Roseiflexus castenholzii DSM 13941] Length = 522 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 83/229 (36%), Gaps = 39/229 (17%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLK-----EQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 D L+ + Q + Y A + + + +AY+ +C+R P G + L Sbjct: 280 DEALEEYAQIPPQDKYYVDARIRISAILKLQNKTREAYDTLFECARLHPANG---QLFLN 336 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + Y K+ A E + P +YL+G Y M R+ L Sbjct: 337 MGKLLYDMNKHAGAIKAFERAVQLLPNDPQ---AHYLLGFMYNLMGRE--------GWAL 385 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQ--LAAKEVE-IGRY--------------YLK 202 + VE ++ ++ Y+ V RN+ LAAKE + ++ Y + Sbjct: 386 AAWRKAVELAPDAHSLRYDLGYMYVRRNRYDLAAKEFARVLQFWPDDVETNFMLGLCYKE 445 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 E AIP F+ VL H +A+ L +Y+ + + + Sbjct: 446 LMEPARAIPLFEKVLRRNP--RHV-QALYYLGASYLQIGNTSLGKAYLR 491 >gi|146308279|ref|YP_001188744.1| hypothetical protein Pmen_3259 [Pseudomonas mendocina ymp] gi|145576480|gb|ABP86012.1| hypothetical protein Pmen_3259 [Pseudomonas mendocina ymp] Length = 268 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 8/56 (14%), Positives = 20/56 (35%), Gaps = 4/56 (7%) Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 Y +G+ Y + QR L Y +++ + + + + + R + Sbjct: 93 ALYQIGLIYMNRFNE----QRDDAKALNYFYQVLNEFPATQAASRSEARIELIRQR 144 >gi|322432943|ref|YP_004210192.1| hypothetical protein protein [Acidobacterium sp. MP5ACTX9] gi|321165170|gb|ADW70874.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium sp. MP5ACTX9] Length = 663 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 38/198 (19%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGEEYI 121 A + N +A + + + P + + + L+ A +G +A L + + Sbjct: 75 AKTHTHQGNTLEAIKGYERAISLNPADADSIELLAKLLLA-----SGTKDEALKLYRQLL 129 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + P+ +V Y + + +D L R+ ++P + Sbjct: 130 SLCPDRPDV----------YFNLGHLLEFD-DDKDASLNIYREAARRFPDNPDA-----H 173 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 + R A G+ AI F+ VL D E L + L Sbjct: 174 FNLARKLKAE------------GQTQQAINSFENVLLLKPD---DAETFNYLGTLFHLLG 218 Query: 242 LMDEAREVVSLIQERYPQ 259 D+A+E L + P Sbjct: 219 ETDKAKESYLLAIKHKPD 236 >gi|269103006|ref|ZP_06155703.1| TPR repeat-containing protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268162904|gb|EEZ41400.1| TPR repeat-containing protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 244 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 54/154 (35%), Gaps = 22/154 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 + +S + + + YEKAV LKE+++ A + FN +P + A + Sbjct: 104 ATNTDAKENQESYSSNLDENQAYEKAVNLILKEKDYQGATKAFNDFIATYPKSVYAPNAH 163 Query: 98 LMSAFVQYSAG------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 + ++ G ++ A ++ SK D +G + + Sbjct: 164 YWLGQLYFAQGQMKAADEHFTAVVAAKD------SSKRAD-ALLKLGAIAQKANDNA--- 213 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 QY ++V+ + +S A+ + Sbjct: 214 -----KATQYYQQVVKEFPSSTTATQAQAALNKL 242 Score = 35.9 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 42/128 (32%), Gaps = 23/128 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 YQ A ++I YP+S +Y +G Y Q K ++ + + Sbjct: 135 KEKDYQGATKAFNDFIATYPKSVYAPNAHYWLGQLYFA--------QGQMKAADEHFTAV 186 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V +S A + A K + + A +Q V+ + + Sbjct: 187 VAAK-DSSKRADALLKLGAI----AQKANDNAK----------ATQYYQQVVKEFPSSTT 231 Query: 226 AEEAMARL 233 A +A A L Sbjct: 232 ATQAQAAL 239 >gi|296125154|ref|YP_003632406.1| Crp/Fnr family transcriptional regulator [Brachyspira murdochii DSM 12563] gi|296016970|gb|ADG70207.1| putative transcriptional regulator, Crp/Fnr family [Brachyspira murdochii DSM 12563] Length = 329 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 50/139 (35%), Gaps = 13/139 (9%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + S + VY KAV N+ + + FN + A VA S+ Sbjct: 192 NSEVSSAEKTAAQAQTAVNDPVYNKAVELYNSNNYVNSIKTFNTLLKS-SNAAVAENSMF 250 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV-YYL-----------VGMSYAQMIR 146 Y+ KY A+++ I +YP+S NV +L +Y Q + Sbjct: 251 YMGKCYYNLNKYDNASTVLLSAIKKYPKSSNVKEAILFLAKTCEAKGDKTKAKAYYQKVI 310 Query: 147 DVPYDQRATKLMLQYMSRI 165 +P +K +SR+ Sbjct: 311 SMPPMDNFSKEANASVSRL 329 >gi|51892857|ref|YP_075548.1| hypothetical protein STH1719 [Symbiobacterium thermophilum IAM 14863] gi|51856546|dbj|BAD40704.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM 14863] Length = 422 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 3/94 (3%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LT+ A F G +++ + + K L LK + +A F + Sbjct: 292 LTLGNLAAALFEGGMMAEATALLDAALQKAPGDPTLLNNKGHLLLKAGQYREALACFEEA 351 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + P +L A ++ G+Y+QA + Sbjct: 352 LKRAPDDP---AALANQAACYFALGRYEQALNAY 382 >gi|13473430|ref|NP_104997.1| hypothetical protein mlr4028 [Mesorhizobium loti MAFF303099] gi|14024179|dbj|BAB50783.1| mlr4028 [Mesorhizobium loti MAFF303099] Length = 558 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 48/141 (34%), Gaps = 32/141 (22%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 A + +A L + + P YY++G + YD + L+Y +R Sbjct: 55 QAKRLPEAEELCLRVLARTPNHPL---AYYILG------TLGIGYD---NEKALRYFARA 102 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V +PY + +G YLK E+ AI Q L D Sbjct: 103 VAEEPQNPY-----------------YHLSLGETYLKVSEFTPAIRHIQQALDLKPD--- 142 Query: 226 AEEAMARLVEAYVALALMDEA 246 EA+ L +AY + A Sbjct: 143 LVEALCALGDAYNEFDKGELA 163 >gi|329954842|ref|ZP_08295859.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056] gi|328526946|gb|EGF53957.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056] Length = 280 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 7/69 (10%), Positives = 17/69 (24%), Gaps = 4/69 (5%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + +++ A + + A Y +A E + Sbjct: 56 AQGDSAYMRNDYASAIQIYESLLTK---GEAAE-IYYNLGNSYYKTDDIAKAILNYERAL 111 Query: 122 TQYPESKNV 130 P + +V Sbjct: 112 LLQPGNADV 120 >gi|296487046|gb|DAA29159.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Bos taurus] Length = 459 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 14/140 (10%), Positives = 43/140 (30%), Gaps = 26/140 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFA-----GVARKSL-------LMSAFVQYSAGK 109 E+ ++ KE + +A + + + A K+ L A Sbjct: 275 ERGTVYFKEGKYKQAVLQYKKIVSWLEYESSFSDEDAEKAQALRLASHLNLAMCHLKLQA 334 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + D ++++ Y Sbjct: 335 FSAAIENCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 383 Query: 170 TNSPYVKGARFYVTVGRNQL 189 ++ A+ + V + ++ Sbjct: 384 PSNK---AAKAQLVVCQQRI 400 Score = 35.9 bits (82), Expect = 6.7, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 2/78 (2%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYF 80 L ++A+C L ++ + ++ D ++ ++ + L +F A F Sbjct: 317 LRLASHLNLAMCHLKLQAFSAAIENCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADF 376 Query: 81 NQCSRDFPFAGVARKSLL 98 + + +P + A K+ L Sbjct: 377 QKVLQLYP-SNKAAKAQL 393 >gi|291238883|ref|XP_002739355.1| PREDICTED: ribosomal protein L31-like, partial [Saccoglossus kowalevskii] Length = 2618 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 26/91 (28%), Gaps = 10/91 (10%) Query: 64 AVLFLKEQNFSKAYEYFNQC-------SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +K++ +A E + P+ A + + Q Y +A Sbjct: 1549 GKTQIKDKKHDQAIESLEKALELMKPWQDKEPWPKEAAEVQFLIGMCQMELVNYVKAFEA 1608 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 I P YY G+ ++ + Sbjct: 1609 FNSAIRINP---EYAEAYYQRGLVRMRLKQS 1636 >gi|281423265|ref|ZP_06254178.1| hypothetical protein HMPREF0971_00195 [Prevotella oris F0302] gi|281402601|gb|EFB33432.1| hypothetical protein HMPREF0971_00195 [Prevotella oris F0302] Length = 348 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 44/141 (31%), Gaps = 26/141 (18%) Query: 61 YEKAVLFLKEQNFSKAYEY-----FNQCSRDFPFAGVARKSLLMSAFVQ-YS----AGKY 110 Y A + ++ + A + F A K+ + S + + Sbjct: 84 YRDAQVSKEQCEYEYAMKSADPAVLQAYLDTF---TDAPKAHVDSIQAHLFMLQQGDKDW 140 Query: 111 QQAA-----SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 A SL E YI +P+S + + I + + +T L + Sbjct: 141 TNALVSNSKSLFEAYIANHPDSPHKAEAEH--------KIDSIDWATVSTTNTLDAYNTY 192 Query: 166 VERYTNSPYVKGARFYVTVGR 186 ++ + N +V A+ + Sbjct: 193 LQDHPNGEHVDEAKDGIKSLN 213 >gi|218437189|ref|YP_002375518.1| hypothetical protein PCC7424_0180 [Cyanothece sp. PCC 7424] gi|218169917|gb|ACK68650.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424] Length = 178 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 16/141 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKY 110 + ++ YE L+L ++ + ++ F + + K+L+ + Y+ +Y Sbjct: 50 EKGTAKDYYELGSLYLDKKLYVQSINLFQKALKADNEVEPENKALVYNALGYAYYAQEQY 109 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + A +E I YPE Y++ ++ +V ++ T L+ ++ Sbjct: 110 EIAIRNYKEAIKLYPE--------YVIALNNLA---NVYAKKQMTAKALETYEETLKIDP 158 Query: 171 NSPYVKGARFYVTVGRNQLAA 191 N+ A+ R + Sbjct: 159 NN---SIAKRRAESLRKRFVE 176 >gi|168704998|ref|ZP_02737275.1| possible protein kinase [Gemmata obscuriglobus UQM 2246] Length = 963 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 23/187 (12%), Positives = 53/187 (28%), Gaps = 21/187 (11%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FA 90 + + R L + V R + +A L+ ++ A + P Sbjct: 584 AALIAPRVGEEVRTADLPAPLAVSGTRGAFLEAAFALRVGRYATAVPLLEALVGEQPAHG 643 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 + A+ + G Y +A + P+ + G+ Y + Sbjct: 644 A----AQFCLAYSLHQQGHYARALERYDVARALLPKDPR---PLFGRGLIYGLRTK---- 692 Query: 151 DQRATKLMLQYMSRIVERYTNS--PYVKGARFYVTVGR--NQLAAKEVEI-GRYYLKRGE 205 +L ++ + Y + + A+K + ++ + Sbjct: 693 ----PELAEAEFTKALALDPGHAESYRNRGLVRFRLAKRDEPFASKAAAVRAKFEESVAD 748 Query: 206 YVAAIPR 212 Y AA+ R Sbjct: 749 YTAALDR 755 >gi|254229658|ref|ZP_04923069.1| tetratricopeptide repeat domain protein [Vibrio sp. Ex25] gi|151937857|gb|EDN56704.1| tetratricopeptide repeat domain protein [Vibrio sp. Ex25] Length = 287 Score = 40.1 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 24/184 (13%), Positives = 56/184 (30%), Gaps = 30/184 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A ++ +A + F Q + + A + L++ + ++++A + Sbjct: 10 AKDYMVSGFLDRAEKIFEQLVEEPDYKEAALQ-QLVTIY--QQTREWEKAIYYANQLAKL 66 Query: 124 YPESKNVDYVYYLVG-MSYA-QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 +K + +++ I + T +Q+ + + A Sbjct: 67 --GNKRSR----MRANIAHFWCEIAMLDQADGNTNKAIQHFKKALAEDPKCVRASIALGR 120 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 + YL+ +Y I VL D + + + + E Y L Sbjct: 121 I-----------------YLESEDYKHTIKYLTGVLE--QDKDFISDVLPTIAECYHHLG 161 Query: 242 LMDE 245 DE Sbjct: 162 QEDE 165 >gi|330506551|ref|YP_004382979.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6] gi|328927359|gb|AEB67161.1| TPR-repeat protein [Methanosaeta concilii GP-6] Length = 261 Score = 40.1 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 40/255 (15%), Positives = 77/255 (30%), Gaps = 68/255 (26%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV----------------- 92 T E E+ + ++ +A E +++ R P V Sbjct: 17 PSTCQENAEEWLERGNELFSQGDYEEAIEAYDEALRLDPENPVAWSNKGTALINQRRYEE 76 Query: 93 ARKS---------LLMSAFVQ-----YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 A ++ L SA+ + G+Y +A ++ I PE+ ++ + L G Sbjct: 77 AIQAFDEVIRIDPELASAWSYKGGALHELGEYDEAIVALDQAIGLEPENGSI---WSLKG 133 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 + Q L + + +S + + Sbjct: 134 SALYF--------QGEYDEALTAIEEAIRLEPDSTIAWSLKADILY-------------- 171 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHA----EEAMARLVEAYVALALMDEAREVVSLIQ 254 ++G+Y AI V+ D A E + RL +L +D A ++ S + Sbjct: 172 ---EQGDYQEAITAVDEVIRLMPDYPAAWSNRGELLWRLERYDESLEALDRAIQLDSDLA 228 Query: 255 ERYPQGYWARYVETL 269 + W E L Sbjct: 229 D-----AWYNRGEAL 238 >gi|322492931|emb|CBZ28212.1| putative intraflagellar transport protein IFT88 [Leishmania mexicana MHOM/GT/2001/U1103] Length = 811 Score = 40.1 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 62/219 (28%), Gaps = 48/219 (21%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-- 110 + +Y + K + +A F + ++L+ S+ V Y Sbjct: 507 EADNVEAIYNLGLAAKKLGLYEEAVRMFKRV-----------QALVDSSEVLYQIADLSD 555 Query: 111 ----QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 A I + P N +G YA+ DV Y Sbjct: 556 LVGDPSALEWFNRLIGRVPTDPN---ALARIGSLYARDGDDV--------QAFHYYLEAY 604 Query: 167 ERY--------------TNSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 Y + A + + Q ++ + + +RG+Y A Sbjct: 605 RYYQVNMDVISWLGAYFVKNEVYDKAVQFFERASHIQPQEVKWQLMVASCHRRRGDYAQA 664 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 ++ V Y D E + LV+ L +EA E Sbjct: 665 KLLYEQVHRKYPD---NIECLNYLVQLCKDAGLNEEANE 700 Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 69/208 (33%), Gaps = 43/208 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFN---QCSR-----DFPFAGVARKSLLMSAFV-------QYS 106 E A+L L+ +++ A E + R + +A + + + QY Sbjct: 144 ESAMLALQ-KDYGAALEKAKDAGKLERSLCKKREQYG-LAEQINVDLTYAVHFNLAVQYQ 201 Query: 107 AGK-YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + Y +A + I V + + ++ Q+ L ++ ++ Sbjct: 202 NHQLYTEALNTYNLIIRN---------VQFPQAGRLRVNMGNIYLAQQNYLLAIKMYRKV 252 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 ++ G + RN I ++K G+Y A ++ V+ DA Sbjct: 253 LDETP----TAGKELRYHLCRN--------IANAFVKLGQYRDAANSYETVVEGNGDANA 300 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLI 253 L+ Y AL ++ + + + Sbjct: 301 T----FNLILCYYALGETEKMKRTFTRL 324 >gi|118085018|ref|XP_417145.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 821 Score = 40.1 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 35/283 (12%), Positives = 78/283 (27%), Gaps = 56/283 (19%) Query: 6 GRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAV 65 + +FE ++ A T + +L Q++ L +D + K Sbjct: 436 LETLKMFEKKDSRVKSAAATNLSFLY--YLENELAQATNYADLAVSSDRYNPAALTNKGN 493 Query: 66 LFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 ++ KA E++ D +L + +A ++ + Sbjct: 494 TVFANGDYEKAAEFYKEALRNDCSCTE----ALYNLGLTYKKLNRIDEALDC---FLKLH 546 Query: 125 PESKNVDYVYYLVGMSY-------------AQMIRDVPYDQ-------------RATKLM 158 N V + + Y Q+I VP D Sbjct: 547 AILGNSAQVLHQIADIYEIMEDPNQAIEWLMQLISVVPTDPHVLTKLGKLYDNEGDKSQA 606 Query: 159 LQYMSRIVERYT--------------NSPYVKGARFYVTVGRNQL---AAKEVEIGRYYL 201 Y + ++ + + A Y L ++ + Y Sbjct: 607 FHYYYESYRYFPSNIEVIEWLGAYCIDTQFCEKAIEYFERAALILPTQVKWQLMVASCYR 666 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 + G Y A+ +++++ + + E + LV + L + Sbjct: 667 RSGNYQKALEKYKVIHQKFPE---NVECLRFLVRLCTDMGLKE 706 >gi|113476830|ref|YP_722891.1| hypothetical protein Tery_3314 [Trichodesmium erythraeum IMS101] gi|110167878|gb|ABG52418.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101] Length = 1240 Score = 40.1 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 56/195 (28%), Gaps = 68/195 (34%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-------YSAGKYQQAASLGEEYITQ 123 +++ A E F ++ Y ++ A + E I Sbjct: 1101 KDYKLAIEDFTTV----------IQANPKDVDAYNYRGICLYEIQEFYGAIADFTEAIKI 1150 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 P+ N YY +S ++ + + + + ++ Sbjct: 1151 NPKDANT---YYHRAISNYKIGDN--------QQAIDDCTEAIKLEPTD----------- 1188 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA---YVAL 240 RYY R A+ R+ D E + + L +A Y Sbjct: 1189 -------------ARYYRNR-----AMLRY--------DTEDNQGGLDDLQKAADIYQKQ 1222 Query: 241 ALMDEAREVVSLIQE 255 D+ +EV+ ++++ Sbjct: 1223 GQNDDYQEVIKMMRK 1237 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 21/142 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117 +YE+A+ + N+ A +++ + + L ++ YQ A S Sbjct: 16 IYERAIANYQLANYQDAIADYSRVIEI-----KSSNAELYYSRGVAKHQMEDYQGAISDY 70 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E I P + + VY G++ +Q+ R + L ++ + N Sbjct: 71 TEAIKIDPNNSS---VYNNRGIALSQIGR--------YQDALTDVTEALRLNPND---AD 116 Query: 178 ARFYVTVGRNQLAAKEVEIGRY 199 + + + E I Y Sbjct: 117 SYYNRGFVYEATSDYEKAIADY 138 >gi|46202722|ref|ZP_00052716.2| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1] Length = 344 Score = 40.1 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 3/69 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ + V L++ + +A F + A + L S GK +AA Sbjct: 8 IFRQGVGALQQGQWDEAARQFRTLTTR---TPNAPEPLYYLGVALLSGGKPDEAAEALTR 64 Query: 120 YITQYPESK 128 I ++ ++ Sbjct: 65 LIRKHGDNP 73 >gi|149375713|ref|ZP_01893482.1| hypothetical protein MDG893_18547 [Marinobacter algicola DG893] gi|149360115|gb|EDM48570.1| hypothetical protein MDG893_18547 [Marinobacter algicola DG893] Length = 438 Score = 40.1 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 43/141 (30%), Gaps = 25/141 (17%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + LTI + + ++ + + + ++ + K + +A Sbjct: 2 RRLLTIALMLCLALSTAHAQEETSE-----------AKALFRAGIQAFKAGDMDEARRLL 50 Query: 81 NQCSRDFPFAGVARKSL-LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 G++ +SL V Y G Y+ A + T P + YY +G+ Sbjct: 51 ESAVSK----GLSSRSLNYNLGVVYYKLGLYEDAEQT---FRTLIPTRQKA-LAYYNIGL 102 Query: 140 SYAQMIRDVPYDQRATKLMLQ 160 + Q A Q Sbjct: 103 TALAREN-----QDAATEAFQ 118 >gi|94269907|ref|ZP_01291596.1| Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1] gi|93451021|gb|EAT01988.1| Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1] Length = 609 Score = 40.1 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 24/178 (13%), Positives = 59/178 (33%), Gaps = 24/178 (13%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 ++ + + + + ++P + ++ L + ++A + + +YP+S + Sbjct: 18 DWQRVRNLYRRYTVEYPDSHRREQAYLELGLAHFQMRFLREALTYFRLFEQRYPDSPLLP 77 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Y S + A L+ + ++V+ + A + Sbjct: 78 RARYWQARSMVE--------VGALAEALEILEQLVDE-PDEELAFDAMEAM--------- 119 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA-EEAMARLVEAYVALALMDEARE 248 R + +GE+ AI + + E + L Y A+ +E RE Sbjct: 120 -----ARTFTLKGEHREAIATYHEMFRRQPLLRFMDPEKLLDLGLGYFAIGWEEEGRE 172 >gi|268574572|ref|XP_002642265.1| Hypothetical protein CBG18253 [Caenorhabditis briggsae] Length = 414 Score = 40.1 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 38/99 (38%), Gaps = 13/99 (13%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 AV +G ++ D ++ ++ R KA L +F A +F P + Sbjct: 95 AVALPMGDSNKAPSDEDVEKASEERG------KAQEALGNGDFDAALTHFTAAIEANPGS 148 Query: 91 G--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 A+++ ++ + A + ++ I+ P+S Sbjct: 149 AMLHAKRASVLL-----KLKRPIAAIADCDKAISINPDS 182 >gi|71415447|ref|XP_809790.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70874225|gb|EAN87939.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 414 Score = 40.1 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 17/146 (11%), Positives = 42/146 (28%), Gaps = 23/146 (15%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CS---RDFPFAGVARK 95 + + ++ E+ K + + +A Y+ + + F A + Sbjct: 122 KAKQKFEMRNNPYQGMSAEEIKNKGNELMGMAKYKEAIAYYTKSIEMEPENHVF--FANR 179 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + Y A E I P Y Y+++ + Y ++ Sbjct: 180 AA-----AHTHLKDYDSAVIDCERAIAINPN--------YSKA--YSRLGTSLFYQEKYA 224 Query: 156 KLMLQYMSRIVERYT-NSPYVKGARF 180 + + ++ E N Y + + Sbjct: 225 R-AVDAFAKASELDPTNDRYKEDLKQ 249 >gi|186686367|ref|YP_001869563.1| TPR repeat-containing serine/threonin protein kinase [Nostoc punctiforme PCC 73102] gi|186468819|gb|ACC84620.1| serine/threonine protein kinase with TPR repeats [Nostoc punctiforme PCC 73102] Length = 709 Score = 40.1 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 57/149 (38%), Gaps = 20/149 (13%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 Y + + + L + + +A E FNQ + P + ++ + + +Y++ Sbjct: 530 KSSYYQAWFSRGNTLLNLRRYPEAIESFNQVIKYNPNSY---QAWFNLGWSLHQNQRYEE 586 Query: 113 AASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + T K+ DY ++Y +G S + + + + ++ V + Sbjct: 587 AIKSYNKAATL----KSKDYQLWYNLGNSQYILQK--------YEDAIASYNKAVRYKPD 634 Query: 172 ---SPYVK-GARFYVTVGRNQLAAKEVEI 196 S Y + A + ++ +A+ + I Sbjct: 635 HSESWYSRGNALLNLKRFQDAIASYDRAI 663 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 14/118 (11%), Positives = 36/118 (30%), Gaps = 26/118 (22%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+K + + +A + + P ++ + YQ A + + Sbjct: 470 YKKGLALQNSNRYEEAIAAYQKVVDLKP--DY-EQAWYNLGNALVNLQHYQDAFNAYD-- 524 Query: 121 ITQYPESKNVDY------VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 K V Y ++ G + + R ++ +++++ NS Sbjct: 525 -------KAVQYKSSYYQAWFSRGNTLLNLRRYP--------EAIESFNQVIKYNPNS 567 Score = 35.5 bits (81), Expect = 8.1, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 54/170 (31%), Gaps = 41/170 (24%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 K F + +A + + + D + +K L ++ +Y++A + + Sbjct: 437 AKGEAFSNLNQYDQAIKAYEKAIELKSDN-YEAWYKKGL-----ALQNSNRYEEAIAAYQ 490 Query: 119 EYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + + P DY +Y +G + + + + + V+ S Y + Sbjct: 491 KVVDLKP-----DYEQAWYNLGNALVNL--------QHYQDAFNAYDKAVQY--KSSYYQ 535 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 N L+R Y AI F V+ ++ A Sbjct: 536 AWFSRGNTLLN-------------LRR--YPEAIESFNQVIKYNPNSYQA 570 >gi|331268455|ref|YP_004394947.1| TPR-repeat-containing protein [Clostridium botulinum BKT015925] gi|329125005|gb|AEB74950.1| TPR-repeat-containing protein [Clostridium botulinum BKT015925] Length = 413 Score = 40.1 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 47/150 (31%), Gaps = 21/150 (14%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREV---YEKAVLFLKEQN-FSKAYEYFNQC----SRD 86 L G ++ L D+ + V Y ++ + + A + + Sbjct: 268 LKGKRLDTNEKTTLSRAEDILKDQGVKYFYNTGRECVEANDKWDMAIDNLTKAYDYGKDS 327 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 + + + L M + ++A EY +YP + V Y + Y + Sbjct: 328 YLYGHI----LFMLGVSYQNKQDVKEALKYYTEYDEKYPNENYIQEVLYRTAILYKNVDL 383 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + +Y ++++ Y + Y Sbjct: 384 N---------KAKEYGQKLLKNYPDCEYSN 404 Score = 35.5 bits (81), Expect = 7.9, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 26/64 (40%), Gaps = 1/64 (1%) Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y + + A+ + Y + + +E + R Y + L +A+E + + YP Sbjct: 341 YQNKQDVKEALKYYTEYDEKYPNENYIQEVLYRTAILYKNVDLN-KAKEYGQKLLKNYPD 399 Query: 260 GYWA 263 ++ Sbjct: 400 CEYS 403 >gi|283832922|ref|ZP_06352663.1| tetratricopeptide repeat protein [Citrobacter youngae ATCC 29220] gi|291071527|gb|EFE09636.1| tetratricopeptide repeat protein [Citrobacter youngae ATCC 29220] Length = 389 Score = 40.1 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 68/189 (35%), Gaps = 30/189 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ + +A + FNQ + + F A + L+ + + ++Q+A + E + Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRVGALQ-QLLQIY--QATSEWQKAIDVAERLVKL 170 Query: 124 YPESKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + + ++ ++ ++ QM D+ K NS Sbjct: 171 GKDKQRIEIAHFYCELALQQMANDDMDRAMTLLKKGAAADK-------NS---------- 213 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 A + +GR Y+ G+Y A+ Q V++ D E E + L Y L Sbjct: 214 -------ARVSIMMGRVYMLNGDYAKAVESLQRVIS--QDKELVSETLEMLQSCYQHLGK 264 Query: 243 MDEAREVVS 251 DE E + Sbjct: 265 NDEWAEFLR 273 >gi|118346379|ref|XP_977151.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89288435|gb|EAR86423.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 614 Score = 40.1 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 50/152 (32%), Gaps = 33/152 (21%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 YS +++++ + +E I P S L+G +Y + + + Y ++ Sbjct: 307 YSNEQFEESIEVLKEAIQINPSSYQS---LNLIGNNYFENNK--------YNEAINYFTQ 355 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + + +P +A K IG YL +Y AI + + Sbjct: 356 SINVFPENP---------------IAYK--SIGHSYLNLKQYETAIENLNKAVMYNPEYS 398 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256 HA L Y + A S I+ Sbjct: 399 HAY---NLLGVCYHNIGDTQNA--AESYIKAN 425 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 6/80 (7%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + + +++A YF Q FP +A KS + +Y+ A + + Sbjct: 337 GNNYFENNKYNEAINYFTQSINVFPENPIAYKS---IGHSYLNLKQYETAIENLNKAVMY 393 Query: 124 YPESKNVDYVYYLVGMSYAQ 143 PE + Y L+G+ Y Sbjct: 394 NPEYSH---AYNLLGVCYHN 410 >gi|114562407|ref|YP_749920.1| TPR repeat-containing protein [Shewanella frigidimarina NCIMB 400] gi|114333700|gb|ABI71082.1| Tetratricopeptide TPR_2 repeat protein [Shewanella frigidimarina NCIMB 400] Length = 1016 Score = 40.1 bits (93), Expect = 0.33, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 33/108 (30%), Gaps = 14/108 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q+ + + + +RY N + +T LA ++ A Sbjct: 715 QQRWQEAVDVLKPFQQRYPNHEFSAIIPAKLTQSYEALAQWDL--------------AAE 760 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + +++ N EA+ E Y+ A + YPQ Sbjct: 761 QLLIIVTNEKPGPLKREALYTAAEYYLKAGDNSNALSTFRTYAKTYPQ 808 Score = 35.5 bits (81), Expect = 8.8, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 44/136 (32%), Gaps = 22/136 (16%) Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + ++ + +YP+ +++ Y + + Q L + ++ Y + Sbjct: 130 VNEYQQLLQRYPQRSENEHIQYQLAKALDL--------QGKLDASLAEVESLLRHYPQTM 181 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y+ F Y Y AAI +Q VL + ++ ++ L Sbjct: 182 YLAELNFRRGEI--------------YYNLQNYSAAITAYQQVLTANDNQKYQLNSLYML 227 Query: 234 VEAYVALALMDEAREV 249 + L + A + Sbjct: 228 GWSEFKLNRLANADKA 243 >gi|114706795|ref|ZP_01439695.1| hypothetical protein FP2506_18304 [Fulvimarina pelagi HTCC2506] gi|114537743|gb|EAU40867.1| hypothetical protein FP2506_18304 [Fulvimarina pelagi HTCC2506] Length = 304 Score = 40.1 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 44/141 (31%), Gaps = 16/141 (11%) Query: 36 VGWERQSSRDVYLDSVTDVRY--QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 +S++ + VY++A L +++ A + F Q + +P A A Sbjct: 157 GAASGESTQPAAPNQPVAAPSGGSSAVYDQAYDQLLAGDYASAEQSFRQYVQTYPDAADA 216 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 + + Y A E ++ P + + +GMS A + Sbjct: 217 SDAQYWLGESLFQQQLYADA---AEVFLNAQKDNPAADKAPDMMLKLGMSLAAL------ 267 Query: 151 DQRATKLMLQYMSRIVERYTN 171 + + +RY Sbjct: 268 --GNQETACITYREVADRYPQ 286 Score = 39.3 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 40/127 (31%), Gaps = 22/127 (17%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 ++ A+ Q AG Y A +Y+ YP++ + Y +G S Q Q+ Sbjct: 182 AVYDQAYDQLLAGDYASAEQSFRQYVQTYPDAADASDAQYWLGESLFQ--------QQLY 233 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + + ++P A + LAA G A ++ Sbjct: 234 ADAAEVFLNAQK---DNPAADKAPDMMLKLGMSLAA-----------LGNQETACITYRE 279 Query: 216 VLANYSD 222 V Y Sbjct: 280 VADRYPQ 286 >gi|311113427|ref|YP_003984649.1| hypothetical protein HMPREF0733_11758 [Rothia dentocariosa ATCC 17931] gi|310944921|gb|ADP41215.1| conserved hypothetical protein [Rothia dentocariosa ATCC 17931] Length = 792 Score = 40.1 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 40/113 (35%), Gaps = 17/113 (15%) Query: 59 EVYEKAVLFL-----KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + Y A L L + +A ++ + A + L + G+ +QA Sbjct: 226 QAYASAQLGLGNAYKDQGKLDEAITTWSNIHHNDNPQAYAW-AQLGLGVAYHDQGEPEQA 284 Query: 114 ASLGEEYITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + + ++ + + Y +G++Y +DQ + + S++ Sbjct: 285 IAAWSK--VRHSDDPKAYAWAQYSLGVAY--------HDQGEPEQAIAAWSKV 327 >gi|124024107|ref|YP_001018414.1| hypothetical protein P9303_24161 [Prochlorococcus marinus str. MIT 9303] gi|123964393|gb|ABM79149.1| Hypothetical protein P9303_24161 [Prochlorococcus marinus str. MIT 9303] Length = 661 Score = 40.1 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 57/184 (30%), Gaps = 45/184 (24%) Query: 60 VYEKAVLFLKEQNFSKAYEYF-NQCSR-DFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y L + ++ + +A R F+ S + + A G Sbjct: 114 YYNLGKLLVADKQYGRAIPVLKEALKRDQKSFSAWNLLSK-----ASFHDEDFAGAVDSG 168 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P++ V++ +G+ Y ++ + + + + + Y+ Sbjct: 169 QRACELSPDNPE---VFFDLGV-YFNALKQLD-------KAVNAYQKAIVFKPD--YL-E 214 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 A + N L K+G+ AI FQ V+ D LV+AY Sbjct: 215 AWVNMG---NIL-----------TKQGKLEGAIRCFQKVIDLNPD----------LVDAY 250 Query: 238 VALA 241 + Sbjct: 251 FNMG 254 >gi|91205042|ref|YP_537397.1| hypothetical protein RBE_0227 [Rickettsia bellii RML369-C] gi|91068586|gb|ABE04308.1| unknown [Rickettsia bellii RML369-C] Length = 250 Score = 40.1 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 17/143 (11%), Positives = 43/143 (30%), Gaps = 15/143 (10%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + DV ++ Y+ A+ K+ A F + +P + + + Sbjct: 107 KTAPEPNKDVAPDKQAYDLALASYKDNKTDDAKNKFKNFIQKYPKSSMISNAYFWYGECF 166 Query: 105 YSAGKYQQAASLGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + Y AA Y+ Y P+ + +S ++ + T Sbjct: 167 FKQKDYNTAAVN---YLKGYKESPKGAKSSDALLKLALSLGEL--------KKTTEACNI 215 Query: 162 MSRIVERYTNSPYVKGARFYVTV 184 + ++ + + + A + Sbjct: 216 LDKLNKEFPGNNRTA-ASKKMAE 237 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 44/131 (33%), Gaps = 30/131 (22%) Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 Y + ++ + + T +++Y S + A F+ Sbjct: 123 YDLALASYKDNK--------TDDAKNKFKNFIQKYPKSSMISNAYFWYGEC--------- 165 Query: 195 EIGRYYLKRGEY-VAAIPRFQLVLANYSDAE---HAEEAMARLVEAYVALALMDEAREVV 250 + K+ +Y AA+ L Y ++ + +A+ +L + L EA ++ Sbjct: 166 -----FFKQKDYNTAAVNY----LKGYKESPKGAKSSDALLKLALSLGELKKTTEACNIL 216 Query: 251 SLIQERYPQGY 261 + + +P Sbjct: 217 DKLNKEFPGNN 227 >gi|45384146|ref|NP_990431.1| cartilage-associated protein precursor [Gallus gallus] gi|3182990|sp|Q90830|CRTAP_CHICK RecName: Full=Cartilage-associated protein; AltName: Full=Dualin; Flags: Precursor gi|1296526|emb|CAA66206.1| cartilage associated protein [Gallus gallus] Length = 271 Score = 40.1 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 26/72 (36%), Gaps = 13/72 (18%) Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 E + R P+ + F + A +A + ++ ++P+ + + Sbjct: 127 ELLEEFQRREPY-KYLQ-------FAYFKANNLPKAIAAAHTFLLKHPDDEMM-----QR 173 Query: 138 GMSYAQMIRDVP 149 M+Y + I D Sbjct: 174 NMAYYKSIPDAE 185 >gi|27375838|ref|NP_767367.1| hypothetical protein blr0727 [Bradyrhizobium japonicum USDA 110] gi|27348976|dbj|BAC45992.1| blr0727 [Bradyrhizobium japonicum USDA 110] Length = 370 Score = 40.1 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 40/133 (30%), Gaps = 17/133 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y +AV+ +K+ + A F++ +R P F K+ L A + G + A + +E Sbjct: 224 YCRAVVLVKKDDPDGAIREFDEVTRIAPAF----VKAYLARAVAWHKKGDDKHAIADFDE 279 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I P + D L + + + V A Sbjct: 280 AIRLQPGNSTA-----------YNNRAAAFRDMGQHDRALADYNEALRLDPKNQDVL-AN 327 Query: 180 FYVTVGRNQLAAK 192 + A Sbjct: 328 RGLLYMMMSDAKH 340 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 31/111 (27%), Gaps = 13/111 (11%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +A + ++F A F + P + +M + G A + E + Sbjct: 122 SRAQEYFNRRDFDLAIAGFTEAIERNPKQAY--FATVMRGEAYAAKGDTDHAVADYTEAM 179 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + P + Y L + D+ L + V S Sbjct: 180 QRNPA---AAWPYELRSAVHF--------DKGEIDEALDDCNSAVRLEPGS 219 >gi|301062314|ref|ZP_07202978.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] gi|300443579|gb|EFK07680.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] Length = 474 Score = 40.1 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 42/124 (33%), Gaps = 16/124 (12%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAF 102 +D D Y + V++ +++ ++ A + F P F + Sbjct: 353 KDFTQAINIDSENAEAYYNRGVVYARKKQYNMAIQDFQTVIGLNPAF----EDAYCNRGN 408 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 V Y+ KY A + + PE + VY+ G+SY + ++ Sbjct: 409 VYYALKKYHLAVQDYHKALEIDPEDGD---VYFNRGLSYLALGQE--------NRAFADF 457 Query: 163 SRIV 166 + V Sbjct: 458 KKAV 461 >gi|295131940|ref|YP_003582616.1| hypothetical protein ZPR_0057 [Zunongwangia profunda SM-A87] gi|294979955|gb|ADF50420.1| protein containing tetratricopeptide region [Zunongwangia profunda SM-A87] Length = 844 Score = 40.1 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 34/70 (48%) Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 Y K GEY A+ R + VLA+ + + L +AY L ++++ + + I YP Sbjct: 562 YNEKFGEYQLAVDRLEQVLASNPEDRLILPSKYNLYKAYGRLNMLNQQDRMKNDIISNYP 621 Query: 259 QGYWARYVET 268 +A +++ Sbjct: 622 NSQYAVFIQN 631 >gi|153825278|ref|ZP_01977945.1| GGDEF family protein [Vibrio cholerae MZO-2] gi|149741106|gb|EDM55165.1| GGDEF family protein [Vibrio cholerae MZO-2] Length = 667 Score = 40.1 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100 D+ L + D +Y L + + A +Y N+ + + Sbjct: 215 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 274 Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + G+Y+++ E+ + P + + YV+ +G +Y ++ V DQ Sbjct: 275 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 332 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L+Y++ + + LA + K +Y AI Sbjct: 333 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAINYANQA 374 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A S++ +AY+ LA + EA + Sbjct: 375 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 402 >gi|326798548|ref|YP_004316367.1| hypothetical protein Sph21_1128 [Sphingobacterium sp. 21] gi|326549312|gb|ADZ77697.1| TPR repeat-containing protein [Sphingobacterium sp. 21] Length = 280 Score = 40.1 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 + +G + ++ ++ A+ RF+ V+ A EA L +Y + L EA + Sbjct: 203 MSLGMFSMRSRQFDKAVNRFKTVIEIQPSA----EAWFYLATSYENIGLKAEAIKAFQ 256 >gi|219848611|ref|YP_002463044.1| Lytic transglycosylase catalytic [Chloroflexus aggregans DSM 9485] gi|219542870|gb|ACL24608.1| Lytic transglycosylase catalytic [Chloroflexus aggregans DSM 9485] Length = 782 Score = 40.1 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 34/89 (38%), Gaps = 15/89 (16%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 Q++S +++ + +P AR + + R Y KRG + +A + +L Sbjct: 74 AAQFLSELLQLFPAAPEAPQAR--------------LLLARSYAKRGAWTSAAAVLRPLL 119 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEA 246 ++ A+ A A L + A Sbjct: 120 SD-PTQPIYVPALFLNARANEAAGLHEAA 147 Score = 39.3 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 40/103 (38%), Gaps = 10/103 (9%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR----------EVYEKAVLFLKEQN 72 A+T I C+LV S + + T +++++A+ + Sbjct: 11 AVTWICGIMCCWLVACTTPSFQPSPDPTATPTELPATPTPLPITSTDLWQRAIAASVIGD 70 Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 A ++ ++ + FP A A ++ L+ A G + AA+ Sbjct: 71 EDTAAQFLSELLQLFPAAPEAPQARLLLARSYAKRGAWTSAAA 113 >gi|325959182|ref|YP_004290648.1| hypothetical protein Metbo_1438 [Methanobacterium sp. AL-21] gi|325330614|gb|ADZ09676.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium sp. AL-21] Length = 167 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 58/163 (35%), Gaps = 41/163 (25%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLL------------ 98 D + +Y++A+ ++++ + A E+FN+ P ++ K ++ Sbjct: 2 DEQDVEVLYKQALSYMEQGDKQMAIEFFNKAIAMDPNYSPAWNDKGIVHMELKEFDEAFK 61 Query: 99 -----------------MSAFVQYSAGKYQQAASLGEEYITQYPE--SKNVDYVYYLVGM 139 +V KY+ A + ++ +YP+ ++ Y YL Sbjct: 62 CFDTAMRIDSSNSMPVYNMGYVLLMQEKYEDAVHAFDMFLERYPDEKNEFYKYGLYLKAE 121 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 ++ ++ + YDQ + + ++R + + Sbjct: 122 AHYKLKQ---YDQ-----AKNLLDKAIKRDRIFKEARDLMIKI 156 >gi|126725124|ref|ZP_01740967.1| TPR domain protein [Rhodobacterales bacterium HTCC2150] gi|126706288|gb|EBA05378.1| TPR domain protein [Rhodobacterales bacterium HTCC2150] Length = 178 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 12/112 (10%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAG 108 D + Q+ + + + + F A ++ P FA +++ FV Y G Sbjct: 58 APDEKSQKTL-DLGLQLHAQGQFDAAKGAYDALIEYCPDFAEGYNQRA-----FVYYLTG 111 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 ++ A + + I P G++ Q+ R Q + L+ Sbjct: 112 RWALALADLDRAIDLSPRHLG---ALSGKGLTLMQLGRQDEA-QLMFREALK 159 >gi|189423182|ref|YP_001950359.1| hypothetical protein Glov_0102 [Geobacter lovleyi SZ] gi|189419441|gb|ACD93839.1| conserved hypothetical protein [Geobacter lovleyi SZ] Length = 152 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 7/92 (7%) Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 +P + LL +++ A I +YP S YL G+S Sbjct: 60 YPPQELIPSLLLGIGKARFNQPDRPAACDCFSSIIDRYPASPQAPEALYLNGVSRYIETH 119 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 DV ++ R+ Y +SP++ A Sbjct: 120 DVA-------NLVAIYDRLAAGYPDSPWLTRA 144 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 3/67 (4%) Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMDEAREVVSLIQERYPQGYW--AR 264 AA F ++ Y + A EA+ + Y+ + + + YP W Sbjct: 85 AACDCFSSIIDRYPASPQAPEALYLNGVSRYIETHDVANLVAIYDRLAAGYPDSPWLTRA 144 Query: 265 YVETLVK 271 L+K Sbjct: 145 DPYRLLK 151 >gi|110598921|ref|ZP_01387165.1| TPR repeat [Chlorobium ferrooxidans DSM 13031] gi|110339463|gb|EAT57994.1| TPR repeat [Chlorobium ferrooxidans DSM 13031] Length = 586 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 16/125 (12%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A + + E N+S++ + + + P +LL+ A V Y + + + I Sbjct: 115 AGVAMAEGNYSESIKRSRELLQIHPGN---LDALLLIAQVSSWQRDYDTSLATYDRLIAA 171 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-NSPYVKGARFYV 182 P V + Y + R + + L + ++RY NS A Sbjct: 172 NP-----------VPLYYREKARVLGW-MTRYDSALAEYDKAIQRYPENSALKAEAAAKR 219 Query: 183 TVGRN 187 RN Sbjct: 220 EYYRN 224 >gi|325916624|ref|ZP_08178887.1| hypothetical protein conserved in bacteria containing a divergent form of TPR repeats [Xanthomonas vesicatoria ATCC 35937] gi|325537178|gb|EGD08911.1| hypothetical protein conserved in bacteria containing a divergent form of TPR repeats [Xanthomonas vesicatoria ATCC 35937] Length = 251 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 42/132 (31%), Gaps = 19/132 (14%) Query: 64 AVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A L + N+++A + + + +L A Q+ G QA + I Sbjct: 95 ARTLLSQGNYAQAADVYEGALRGLY---RDDPDLMLGLAQAQFGLGNAAQARQTLDALIA 151 Query: 123 QYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P ++ D ++ Y + + I L +V+ Y + AR Sbjct: 152 ANPTFRSHDGHLLYARAVESSGTID----------EALHEYETLVQGYP----GEEARVR 197 Query: 182 VTVGRNQLAAKE 193 + A E Sbjct: 198 YAQLLQRAARPE 209 >gi|323345357|ref|ZP_08085580.1| hypothetical protein HMPREF0663_12116 [Prevotella oralis ATCC 33269] gi|323093471|gb|EFZ36049.1| hypothetical protein HMPREF0663_12116 [Prevotella oralis ATCC 33269] Length = 382 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 53/179 (29%), Gaps = 39/179 (21%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF-----LKE--QN 72 + + F IA+ +Y S ++E YE A+ L+ Sbjct: 97 RRTIFIVSFVIALIICATC-------IYFYSNAKGNKEQEAYEYAMKSQDPLVLQSFLDT 149 Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS-----LGEEYITQYPES 127 ++ A E + A + L + A E+Y+ ++P++ Sbjct: 150 YTDASEA-------HRDSIQAHLTALNQI-----DKDWTNAVVSNSKMAIEDYLERHPDT 197 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + + + I Q TK +E + N +V A+ + Sbjct: 198 PHKEEA-----LHKLDSIDWANAQQANTKDA---FVSYLEDHPNGEHVDDAKDGIKNIN 248 >gi|300866468|ref|ZP_07111159.1| putative Protein prenyltransferase, alpha subunit [Oscillatoria sp. PCC 6506] gi|300335512|emb|CBN56319.1| putative Protein prenyltransferase, alpha subunit [Oscillatoria sp. PCC 6506] Length = 1012 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 6/61 (9%), Positives = 23/61 (37%), Gaps = 9/61 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+ + + +A E +++ ++ + + + Y +Y +A + + Sbjct: 222 EQGNTLYNLRRYDEAIEAYDKALEIDSNY------QDAWYDKGYTLYQLWRYDEAIAAYD 275 Query: 119 E 119 + Sbjct: 276 K 276 >gi|118381868|ref|XP_001024094.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89305861|gb|EAS03849.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 850 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 16/114 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y KA+L + +A +N+ P ++ + L + +GKY++A + Sbjct: 244 YYNKAILCKQLGKNQEALNNYNKVIEINPNYSN----AYLNKGSLFLFSGKYEEAIKNYD 299 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + I P K VYY G+S + R + ++ ++ ++ N+ Sbjct: 300 KVIQLDPNHKQ---VYYNKGISLKALGR--------YQESIENYNKAIQLDPNN 342 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 26/207 (12%), Positives = 58/207 (28%), Gaps = 37/207 (17%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 Q++ ++ + + F +A +++ P + S +YQ+A Sbjct: 2 SQQKYHQAGLTQQSQGKFQEAVNSYSKAIELDP--QYTE-AYCNRGVALNSLNQYQEAIK 58 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + P K YY G+S + + + + +++VE N Sbjct: 59 NYNKALEINPNYKL---AYYNKGISLQAL--------KQLQEAISCYTKVVEIDPNYK-- 105 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 A + + ++ A+ F L A + Sbjct: 106 -QAHLNKGLC--------------FFNLNQFQEALNNFNKALQCDPKYSL---ACYNIAL 147 Query: 236 AYVALALMDEAREVVSL---IQERYPQ 259 +Y L +A + Y Sbjct: 148 SYQKLGQSQQALTYYDKAINLDPNYKN 174 >gi|83814061|ref|YP_446792.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855] gi|83755455|gb|ABC43568.1| TPR repeat protein [Salinibacter ruber DSM 13855] Length = 554 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 69/216 (31%), Gaps = 52/216 (24%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++ V +++ A E F +C+ +P + + G+ +++ Sbjct: 225 EALFNLGVTLERDEQLEAAVEAFQRCADVYPEHP---EVWYELGYCYDRLGEDEKSVEAY 281 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + ++ P SK+ +Y G+ ++ R VE Y Sbjct: 282 DNHLDIDPYSKD---AWYNRGIVLNRLGR---------------FGEAVESY------DM 317 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLK------RGEYVAAIPRFQLVLA-NYSDAEHAEEAM 230 A LA + YY + +G+ AA+ ++ VL DA Sbjct: 318 A----------LAIHDEFASAYYNRGNAEANQGDLEAAVESYERVLELEGPDAATY---- 363 Query: 231 ARLVEAYVALALMDEAREVVSL---IQERYPQGYWA 263 L AY + AR ++ YP+ W Sbjct: 364 YNLALAYEEQGDLRAARTYYEKTLDLKSNYPEA-WY 398 Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 74/248 (29%), Gaps = 65/248 (26%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAASLGEE 119 E A + +E A E ++ P+ R+ +L++ + G+ ++A E+ Sbjct: 127 EIASFYFEEGEMETALEVIDRLIELHPYTSDAWMRRGILLN-----NLGRPEEALEAYEQ 181 Query: 120 YITQYPESKN--------------VDYVY--Y--------LVGMSYAQMIRDVPYDQRAT 155 + P VD Y L G + + + D++ Sbjct: 182 ALDVNPTDTETLINLGITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQ-L 240 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLK 202 + ++ R + Y P + + ++L E + Y + Sbjct: 241 EAAVEAFQRCADVYPEHP---EVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYN 297 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMAR---LVEAYVALA--------LMDEAREVVS 251 RG + + RF + +Y + A+A AY L Sbjct: 298 RGIVLNRLGRFGEAVESY------DMALAIHDEFASAYYNRGNAEANQGDLEAAVESYER 351 Query: 252 LIQERYPQ 259 +++ P Sbjct: 352 VLELEGPD 359 Score = 35.1 bits (80), Expect = 9.9, Method: Composition-based stats. Identities = 37/236 (15%), Positives = 70/236 (29%), Gaps = 50/236 (21%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQQA 113 Y + ++ + F +A E ++ A Y + G + A Sbjct: 296 YNRGIVLNRLGRFGEAVESYDMALAIHD----------EFASAYYNRGNAEANQGDLEAA 345 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 E + E + YY + ++Y + D RA + + + Y + Sbjct: 346 VESYERVLEL--EGPDAA-TYYNLALAYEEQG-----DLRAARTYYEKTLDLKSNYPEAW 397 Query: 174 Y-----------VKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAAIPRFQLVLANY 220 Y + A N A + +++ R Y + + L +Y Sbjct: 398 YGLGCCFDTDERPEEALECFRYAVNLDA----NVPKFWTARADCAYK--VGKLDEALESY 451 Query: 221 SDA----EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG--YWARYVETLV 270 A E E A E + +EA E E P+ + R + L+ Sbjct: 452 QHAVRLDESNEHAWTGYAETLLEKEQPEEALEAYRQALELDPKSANTYFRQAKALL 507 >gi|56420359|ref|YP_147677.1| hypothetical protein GK1824 [Geobacillus kaustophilus HTA426] gi|47076784|dbj|BAD18326.1| hypothetical protein [Geobacillus kaustophilus] gi|56380201|dbj|BAD76109.1| hypothetical protein [Geobacillus kaustophilus HTA426] Length = 1358 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +AV++L+E KA + P +AR++L++ G+YQ+AA+L E Y Sbjct: 1240 QAVVWLQEGQHEKAERQLEAIVAEEP---LAREALMLLGEQYMETGRYQEAAALWERYAD 1296 Query: 123 QYPESKNV 130 YPE + + Sbjct: 1297 WYPEDEEL 1304 >gi|115470301|ref|NP_001058749.1| Os07g0113700 [Oryza sativa Japonica Group] gi|33147009|dbj|BAC80093.1| tetratricopeptide repeat(TPR)-containing protein-like [Oryza sativa Japonica Group] gi|34393726|dbj|BAC83208.1| tetratricopeptide repeat(TPR)-containing protein-like [Oryza sativa Japonica Group] gi|113610285|dbj|BAF20663.1| Os07g0113700 [Oryza sativa Japonica Group] gi|218198988|gb|EEC81415.1| hypothetical protein OsI_24660 [Oryza sativa Indica Group] Length = 1011 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 64/206 (31%), Gaps = 35/206 (16%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + + E + +A F+Q R+ P ++L+ + A S + I Sbjct: 269 SRGIAQVNEGRYDQAISIFDQILRETPTYP---EALIGRGTAYAFQRELDSAISDFTKAI 325 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P + + G + A + ++ +++ +E NSP Sbjct: 326 QSNP---SAGEAWKRRGQARAAL--------GEFTEAVEDLTKALEFEPNSP-------- 366 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 + L E I + K +Y AA+ + A L AL Sbjct: 367 -----DIL--HERGIVNF--KFKDYNAAVEDLSTCVKRDKKNSSAH---TYLGLTLSALG 414 Query: 242 LMDEAREVVSLIQERYPQGYWARYVE 267 A + L+ +Y + + + Sbjct: 415 EYKRAED-EHLLGIKYDENFLDSWAH 439 >gi|322418094|ref|YP_004197317.1| hypothetical protein GM18_0560 [Geobacter sp. M18] gi|320124481|gb|ADW12041.1| hypothetical protein GM18_0560 [Geobacter sp. M18] Length = 186 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 7/57 (12%) Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P S YL G++ + D A K + Q ++ +Y S + + A+ Y Sbjct: 134 PRSYAAPEALYLRGVARYK----SSRDNSALKEIYQ---QLAAQYPESEWTQKAQPY 183 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 3/80 (3%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSL 252 + IG+ L G++ A+ +F +L + A EA+ A + + A +E+ Sbjct: 107 LGIGKVSLDLGQFSEAVIQFNTLLNGCPRSYAAPEALYLRGVARYKSSRDNSALKEIYQQ 166 Query: 253 IQERYPQGYWARYV--ETLV 270 + +YP+ W + TL+ Sbjct: 167 LAAQYPESEWTQKAQPYTLL 186 >gi|158338544|ref|YP_001519721.1| TPR domain-containing protein [Acaryochloris marina MBIC11017] gi|158308785|gb|ABW30402.1| TPR domain protein [Acaryochloris marina MBIC11017] Length = 488 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 38/121 (31%), Gaps = 23/121 (19%) Query: 48 LDSVTDVRYQ--REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF--- 102 LD + DV+ + Y + LK ++++ A F++ P A+ Sbjct: 245 LDPLPDVQEPTAADFYLQGGDKLKRKDYAGAIADFSEAIELDP--EYVE------AYYGR 296 Query: 103 --VQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLM 158 Y +A + I P DY Y G+ A RD + Sbjct: 297 SLGHYRQRDSFKAIEDLTQAIKLNP-----DYTQAYVQRGVVKAN-SRDTSGSLSDYRQA 350 Query: 159 L 159 L Sbjct: 351 L 351 >gi|126332161|ref|XP_001367572.1| PREDICTED: similar to KIAA0155 [Monodelphis domestica] Length = 1168 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 99/273 (36%), Gaps = 33/273 (12%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 A L RA E + ++T +++A + E + +Y + + + + Y Sbjct: 476 ASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYL 535 Query: 63 K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + + NF +A ++F + ++D P + L A ++ E Sbjct: 536 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 589 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSPY 174 + Q P ++N Y +G + Q + D+ R L +++ + Y Sbjct: 590 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLY 648 Query: 175 VKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVL 217 + Y R+ A +E + + Y+++ +Y++A+ ++ L Sbjct: 649 AANGIGAVLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCL 708 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 + ++ E + L A + E ++ + Sbjct: 709 RKFYKHQNTEVVLY-LARALFKCGKLQECKQTL 740 >gi|189424871|ref|YP_001952048.1| hypothetical protein Glov_1812 [Geobacter lovleyi SZ] gi|189421130|gb|ACD95528.1| Tetratricopeptide TPR_2 repeat protein [Geobacter lovleyi SZ] Length = 406 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 58/180 (32%), Gaps = 46/180 (25%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV-GMSYAQMIRDVPYDQRAT 155 LL+ A Y +G Y A S +E + P+++ V Y G +Y D Sbjct: 46 LLLKADTAYLSGDYSTAISAYQEALRLSPDNQLV----YQKLGEAYFSAGED-------- 93 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI------------------- 196 + L +++ + L ++ I Sbjct: 94 EEALATFKTYLKK------STSTSARIHYVSGVLLERQGNIDAALDEYNAAMAIDPIHSG 147 Query: 197 -----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 Y+ RGE+ AI +Q++ ++ + +L AYV D+A EV Sbjct: 148 ARRRRADIYIIRGEFKKAINEYQILHEASPNSPIL---LYKLSRAYVKDKQFDKALEVYR 204 >gi|47227439|emb|CAG04587.1| unnamed protein product [Tetraodon nigroviridis] Length = 553 Score = 40.1 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 42/117 (35%), Gaps = 11/117 (9%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LT + AV +G + + D+ + ++ + LK+ N +A E FN+ Sbjct: 73 LTFYKRAAVFLAMGKSKSALPDLTRAIQLKPDFLAARLQRGNILLKQGNTQEAREDFNEV 132 Query: 84 SRDFPFAGVARKSLLMS----------AFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + A++ LM A Y G Y S+ E I P +V Sbjct: 133 LQRSADNEEAQQ-QLMKTHELVGLQEEAHAAYHQGDYSTTISVLERVIEISPWDPDV 188 >gi|323496602|ref|ZP_08101655.1| hypothetical protein VISI1226_13321 [Vibrio sinaloensis DSM 21326] gi|323318348|gb|EGA71306.1| hypothetical protein VISI1226_13321 [Vibrio sinaloensis DSM 21326] Length = 260 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 43/130 (33%), Gaps = 23/130 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A + +++ YP+S +Y +G Y +D K ++ + + Sbjct: 154 KKRDYTGAIAAFQQFQKDYPDSSFTPNSHYWLGQLYFAKKQD--------KEAVKSFAAV 205 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V Y S A + A + + A +Q VL Y + Sbjct: 206 VS-YKKSNKRADALVKLGDI----AGRNNNAAQ----------ANKYYQQVLDEYPSSAS 250 Query: 226 AEEAMARLVE 235 A+ A R+ + Sbjct: 251 AKLAQERIKK 260 Score = 39.3 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 55/159 (34%), Gaps = 16/159 (10%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDF 87 + A ++ + + ++ Y+ AV LK+++++ A F Q +D+ Sbjct: 113 ATAAPVAASTTDGDTKPSAGGTFSSNADEQTAYQNAVDLILKKRDYTGAIAAFQQFQKDY 172 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAA---SLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 P + S + ++ + ++A + Y +K D + Sbjct: 173 PDSSFTPNSHYWLGQLYFAKKQDKEAVKSFAAVVSYKK---SNKRAD------ALVKLGD 223 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 I +Y ++++ Y +S K A+ + Sbjct: 224 IAGRN---NNAAQANKYYQQVLDEYPSSASAKLAQERIK 259 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 47/130 (36%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + + Y +S + + +++ G+ Y Sbjct: 145 YQNAVDLILKKRDYTGAIAAFQQFQKDYPDSSFTPNSHYWL--------------GQLYF 190 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A+ F V+ +Y + +A+ +L + +A + + + YP Sbjct: 191 AKKQDKEAVKSFAAVV-SYKKSNKRADALVKLGDIAGRNNNAAQANKYYQQVLDEYPSSA 249 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 250 SAKLAQERIK 259 >gi|294783902|ref|ZP_06749224.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] gi|294479714|gb|EFG27493.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] Length = 441 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 19/43 (44%) Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 E + +Y L E + + L+++ +P WA+ E L Sbjct: 394 PEIYYNIASSYAKLGNRVEVTKYIRLLKQEFPSSSWAKKSEAL 436 >gi|294055392|ref|YP_003549050.1| Tetratricopeptide TPR_2 repeat protein [Coraliomargarita akajimensis DSM 45221] gi|293614725|gb|ADE54880.1| Tetratricopeptide TPR_2 repeat protein [Coraliomargarita akajimensis DSM 45221] Length = 652 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 13/106 (12%), Positives = 29/106 (27%), Gaps = 22/106 (20%) Query: 91 GVARKSLLMSAFVQYS-----------AGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 A ++ L A + G + A + + P S + +YY Sbjct: 558 EYASRA-LDLADDYWRCWAQLGVGYALLGDVEAAGQAFDRAVELAPNSSSA--LYYWAAF 614 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 S D + + R +E ++ + + + Sbjct: 615 S--------SRDATRVREATHAVERALELDPDNEAARRLLQKLRIL 652 >gi|294654974|ref|XP_457061.2| DEHA2B02156p [Debaryomyces hansenii CBS767] gi|199429595|emb|CAG85047.2| DEHA2B02156p [Debaryomyces hansenii] Length = 378 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 46/113 (40%), Gaps = 14/113 (12%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA-ASL 116 +++ K LKE+++ A + ++ P + ++LL + Y+ A + Sbjct: 7 EQLFTKGDTELKEKDYLSAIATYTAALKEHP---KSIQALLKRSTAYRKLNNYENAKKDV 63 Query: 117 GEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 + ++ + K + Y+ +G+ Y +R K+ L+ + VE Sbjct: 64 SDAFVIAEQKGKRAELGACYFRLGLIYYA--------ERNYKVALKNFEKSVE 108 >gi|291276674|ref|YP_003516446.1| hypothetical protein HMU04420 [Helicobacter mustelae 12198] gi|290963868|emb|CBG39704.1| putative periplasmic protein [Helicobacter mustelae 12198] Length = 322 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 48/131 (36%), Gaps = 16/131 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 V++ A L+ +N+ +A + + + +A M + YS +YQ A S + Sbjct: 205 VFQDAKSSLRSKNYDQARKSLEILVKKKY---KLAE-VYFMLGDISYSKKEYQTAVSYYK 260 Query: 119 EYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + S +D Y+ + + K ++ +V+ Y NS + Sbjct: 261 K-------SFTLDEGANYMPVL--LWRTAWSFRYLKDAKNYDRFTEILVKHYPNSEQAQK 311 Query: 178 ARFYVTVGRNQ 188 + +N+ Sbjct: 312 ILE-MREKKNK 321 >gi|118375735|ref|XP_001021051.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89302818|gb|EAS00806.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 443 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 35/252 (13%), Positives = 77/252 (30%), Gaps = 42/252 (16%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFP 88 + + + + Q + +++ D V EV+ KAV ++ + F +A Sbjct: 90 LGLAYASSGDLQKALNIFEDLVKKDPNNLEVFFNKAVALIENKKFDEAILILMDLINQ-- 147 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 K+ S K ++A ++Y Y+ + Sbjct: 148 --KY-EKAYFKLVDCFVSLNKREEAMKYLQQYYQINSGDSQKTYLLGEKAI--------- 195 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE------------- 195 D + ++ + V+ +T ++ K + Sbjct: 196 --DIQEVDYAVECFEKAVQLDPKHQNAC-LFLGMTYYNKKMYEKSIHYYLKTSEINPKNF 252 Query: 196 -----IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 +G YL++ EY A+ F+ A+ Y+ + DEA ++ Sbjct: 253 TCLNGLGIVYLEQKEYEKALQYFEQSCKLEP--RFVP-ALFHKGYTYLKMGKDDEALKIF 309 Query: 251 S---LIQERYPQ 259 + L+ + YP Sbjct: 310 NQVILMDKNYPD 321 >gi|332140188|ref|YP_004425926.1| putative unknown membrane associated protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327550210|gb|AEA96928.1| putative unknown membrane associated protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 441 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 1/72 (1%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 ++ V + + ++ A L L + N+ + Y + V K+ ++ A Sbjct: 119 AKVVEQQPIPEKFEMTTLFSLAQLNLMQGNYDETITYLERWESLN-TGPVPVKNKVIKAQ 177 Query: 103 VQYSAGKYQQAA 114 Y +Y +AA Sbjct: 178 AYYQNKQYDEAA 189 >gi|322821466|gb|EFZ27783.1| mitochondrial import receptor subunit, putative [Trypanosoma cruzi] Length = 403 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 31/94 (32%), Gaps = 11/94 (11%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAG 108 E + +K+ N KA +++ + P + + ++ M Sbjct: 102 PQKTEKAEEYRARGNDAMKQGNLRKAVRCYSEALKYEPSSSTLWSNRAAAMI-----QLD 156 Query: 109 KYQQAASLGEEYITQYPESKNVDY----VYYLVG 138 + A S + I+ P + Y YL+G Sbjct: 157 RGDDALSDAKRAISLDPMNVKAYYRKASALYLLG 190 >gi|319790424|ref|YP_004152057.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovibrio ammonificans HB-1] gi|317114926|gb|ADU97416.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovibrio ammonificans HB-1] Length = 650 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 20/107 (18%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ- 111 V + ++++K + K ++S A EYF P + +K+L M A Y+ GK Sbjct: 23 KVDVEAKLFQKGLQQFKIGSYSTALEYF--IRALKPGSKYYKKALFMLAKTYYAIGKKLG 80 Query: 112 ------QAASLGE-EYITQYPESKNV--DYVYYLVG-----MSYAQM 144 QA + E +I + + DY YYL +S+ + Sbjct: 81 NKQYLWQALNYLELYFIAV--GNHKLPWDY-YYLRAQIYESLSFYEQ 124 >gi|253989561|ref|YP_003040917.1| tetratricopeptide repeat-containing protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781011|emb|CAQ84173.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 389 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 70/190 (36%), Gaps = 32/190 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT- 122 ++ + +A F Q + F A +SLL+ S +++A + E+ + Sbjct: 114 GRDYMSAGLYDRAENMFAQLVNEKEFRQNAFQSLLVI---YQSTSDWKKAIDVAEKLVKS 170 Query: 123 -QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 ++ + + + Y + + Q + D + Y+++ V+ N Sbjct: 171 GKHELRQKIAHFYCELAL---QEMSGDDLD-----EAIGYLNKAVQADKNC--------- 213 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 A + +GR ++ R EY+ A + VL D E E++ L E Y L Sbjct: 214 --------ARVSIMLGRLFMARQEYIKAADALKSVLE--QDKELVSESLPMLQECYQHLN 263 Query: 242 LMDEAREVVS 251 DE + Sbjct: 264 QGDEWENFLR 273 >gi|166366450|ref|YP_001658723.1| heat shock protein 40 [Microcystis aeruginosa NIES-843] gi|166088823|dbj|BAG03531.1| heat shock protein 40 [Microcystis aeruginosa NIES-843] Length = 421 Score = 40.1 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 52/134 (38%), Gaps = 14/134 (10%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 ++ R + + T + Y++ + +E+N+ A ++ Q P ++ L Sbjct: 62 KEYDRSLSPEIPTFNPSAEDFYQQGWHYAQEKNYQLAIAFYQQAIAINPQ-FW--QAYLQ 118 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 A V Y + +Q S + + P + YY +G+S ++ T+ L Sbjct: 119 RAEVYYHNQQDRQVLSDCRQVLQLKP---DCSQAYYYLGLSRQRL--------GYTQSSL 167 Query: 160 QYMSRIVERYTNSP 173 + + + ++P Sbjct: 168 EAYRKAIAIDPDNP 181 >gi|315186029|gb|EFU19792.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta thermophila DSM 6578] Length = 458 Score = 40.1 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 36/102 (35%), Gaps = 11/102 (10%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 D + Y ++Y +A + A F + S P +SL+ + Sbjct: 198 DPDILPAYYYLGKIYREAKE------YHAALLSFEK-SVRHP--DYKLRSLIERGTCYLN 248 Query: 107 AGKYQQAASLGEEYITQYP--ESKNVDYVYYLVGMSYAQMIR 146 G Y+ A E + P + + Y Y + ++Y + R Sbjct: 249 MGDYESAIMELERAVKLSPEATNPEMLYARYFLSIAYEKRRR 290 >gi|170078757|ref|YP_001735395.1| TPR domain-containing protein [Synechococcus sp. PCC 7002] gi|169886426|gb|ACB00140.1| TPR domain containing protein [Synechococcus sp. PCC 7002] Length = 288 Score = 40.1 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 36/124 (29%), Gaps = 15/124 (12%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CS 84 + L+G ++ + + Y V L + NF A F+ Sbjct: 22 ILLGTVLLLGSGTPGLSQTAPETSNNAANAIQRYNAGVDALTQGNFEGAIAEFSAAINLD 81 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV----DYVYYLVGMS 140 P + + + G+YQ A + I PE + Y YL + Sbjct: 82 ESDP------DAYYNRGYSYHVLGEYQAAYDDYSQAIQLKPEFADAYGNRCYAAYL--LD 133 Query: 141 YAQM 144 + Sbjct: 134 NYEQ 137 >gi|327438801|dbj|BAK15166.1| FOG: TPR repeat [Solibacillus silvestris StLB046] Length = 508 Score = 40.1 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 12/81 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 EKA +++ +F A E Q ++P + A + G+ +QA +L Sbjct: 156 EKARRHMEQGDFKTAIEMLEQIIEEYPDLWNAYN-----NLALAYFYVGEAEQARALLYR 210 Query: 120 YITQYPESKN-----VDYVYY 135 + + + + + YY Sbjct: 211 VLRENQGNLHALCNLAVFAYY 231 >gi|294508725|ref|YP_003572784.1| Conserved hypothetical protein containing TPR domain [Salinibacter ruber M8] gi|294345055|emb|CBH25833.1| Conserved hypothetical protein containing TPR domain [Salinibacter ruber M8] Length = 554 Score = 40.1 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 69/216 (31%), Gaps = 52/216 (24%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++ V +++ A E F +C+ +P + + G+ +++ Sbjct: 225 EALFNLGVTLERDEQLEAAVEAFQRCADVYPEHP---EVWYELGYCYDRLGEDEKSVEAY 281 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + ++ P SK+ +Y G+ ++ R VE Y Sbjct: 282 DNHLDIDPYSKD---AWYNRGIVLNRLGR---------------FGEAVESY------DM 317 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLK------RGEYVAAIPRFQLVLA-NYSDAEHAEEAM 230 A LA + YY + +G+ AA+ ++ VL DA Sbjct: 318 A----------LAIHDEFASAYYNRGNAEANQGDLEAAVESYERVLELEGPDAATY---- 363 Query: 231 ARLVEAYVALALMDEAREVVSL---IQERYPQGYWA 263 L AY + AR ++ YP+ W Sbjct: 364 YNLALAYEEQGDLRAARTYYEKTLDLKSNYPEA-WY 398 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 74/248 (29%), Gaps = 65/248 (26%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAASLGEE 119 E A + +E A E ++ P+ R+ +L++ + G+ ++A E+ Sbjct: 127 EIASFYFEEGEMETALEVIDRLIELHPYTSDAWMRRGILLN-----NLGRPEEALEAYEQ 181 Query: 120 YITQYPESKN--------------VDYVY--Y--------LVGMSYAQMIRDVPYDQRAT 155 + P VD Y L G + + + D++ Sbjct: 182 ALDVNPTDTETLINLGITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQ-L 240 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLK 202 + ++ R + Y P + + ++L E + Y + Sbjct: 241 EAAVEAFQRCADVYPEHP---EVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYN 297 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMAR---LVEAYVALA--------LMDEAREVVS 251 RG + + RF + +Y + A+A AY L Sbjct: 298 RGIVLNRLGRFGEAVESY------DMALAIHDEFASAYYNRGNAEANQGDLEAAVESYER 351 Query: 252 LIQERYPQ 259 +++ P Sbjct: 352 VLELEGPD 359 >gi|171915654|ref|ZP_02931124.1| Peptidase C39, bacteriocin processing [Verrucomicrobium spinosum DSM 4136] Length = 1793 Score = 40.1 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 4/84 (4%) Query: 71 QNFSKAYEYFNQCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + +A ++F P + +K+LL V G+ +A L + Q + Sbjct: 208 GRYDEAQKWFEASQSRAPLGHPMHQKALLRLGVVAMDRGELDKATELFAR-LRQNDSDPS 266 Query: 130 -VDYVYY-LVGMSYAQMIRDVPYD 151 + Y Y + + + + D Sbjct: 267 RMTYASYWIRALGLMKAKQTALRD 290 >gi|148262450|ref|YP_001229156.1| peptidoglycan-binding LysM [Geobacter uraniireducens Rf4] gi|146395950|gb|ABQ24583.1| Peptidoglycan-binding LysM [Geobacter uraniireducens Rf4] Length = 200 Score = 40.1 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 28/62 (45%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS + + +++++KA K+ ++ +A + F++ F + +A + L A Sbjct: 132 SSVTTHPAVKQEPDAGQQLFQKAARAYKKGDYRQALKAFDRFLSKFSNSPLAADASLYRA 191 Query: 102 FV 103 Sbjct: 192 DC 193 >gi|225620512|ref|YP_002721769.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] gi|225215331|gb|ACN84065.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] Length = 712 Score = 40.1 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 69/187 (36%), Gaps = 30/187 (16%) Query: 93 ARKSLLMSAFVQYSAGKYQ----QAASLGEEYITQ-YPESKNVDYVYYLVGMSYAQMIRD 147 A +LL+ A + G+ + QA +++I PE+ V + G+ Y + Sbjct: 117 AYDALLILASSYLNNGENEADFHQAIGYYDDFIKNVKPENSKV--ARFERGLCYYNLNIL 174 Query: 148 VPYDQRATKLMLQY-MSR---------IVERYTNSPYVKGARFYVTVGRNQLAAKEVEI- 196 D A KL+ + + + T S + A F++ A+ I Sbjct: 175 TKADIEANKLIYDFPFYDDAYFLKGIILAKNGTKSEFYDDAIFFLDRAVELNASNYNAIY 234 Query: 197 --GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 G +Y + Y AI + +L + + ++ A+ ++A L + +E Sbjct: 235 ERGEWYFNKENYRKAIENYNELLKH--NNKYRLNALLGKIQALHDLIIENE--------N 284 Query: 255 ERYPQGY 261 E YP Sbjct: 285 ENYPDSQ 291 >gi|224532851|ref|ZP_03673466.1| hypothetical protein BBUWI9123_0229 [Borrelia burgdorferi WI91-23] gi|224512240|gb|EEF82626.1| hypothetical protein BBUWI9123_0229 [Borrelia burgdorferi WI91-23] Length = 791 Score = 40.1 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 75/220 (34%), Gaps = 44/220 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117 + ++ NF ++ EY N F A+K ++ + ++ K +++ Sbjct: 553 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 606 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175 + I P + ++Y YL + + + S ++E+ S Y+ Sbjct: 607 NKAIDLNP--EKIEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 655 Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222 A+ Y G A +E +G Y K Y AI F+ + N Sbjct: 656 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 712 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259 EA L + + A++++ ++ P+ Sbjct: 713 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 750 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK++N+ A ++ P + + A +G QA S E+ Sbjct: 620 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 676 Query: 120 YI 121 I Sbjct: 677 II 678 >gi|163802038|ref|ZP_02195934.1| hypothetical protein 1103602000573_AND4_03434 [Vibrio sp. AND4] gi|159174179|gb|EDP58987.1| hypothetical protein AND4_03434 [Vibrio sp. AND4] Length = 251 Score = 40.1 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 48/130 (36%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + + Y +S Y + +++ G+ Y Sbjct: 137 YQDAVDLILKKRDYSGAIAAFQQFQKDYPDSTYSANSNYWL--------------GQLYF 182 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A+ F V+++ + +A+ +L + +A++ + + YP Sbjct: 183 AKKQDKEAVKSFAAVVSD-KGSNKRADALVKLGDIAERNNNDAQAKKYYQQVVDEYPGSA 241 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 242 SAKVAGSKLK 251 >gi|124008252|ref|ZP_01692948.1| serine/threonine protein kinases [Microscilla marina ATCC 23134] gi|123986201|gb|EAY26030.1| serine/threonine protein kinases [Microscilla marina ATCC 23134] Length = 920 Score = 40.1 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 69/186 (37%), Gaps = 21/186 (11%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV---ARK 95 + + + Y S + + + + +N+ KA E + + + +R+ Sbjct: 129 AHEKAIEYYQKSYQLKPAPQLLMAQGKSYYLSKNYPKATETYQKALNIYQTKQDVGQSRQ 188 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQ 152 +L M A + + G+YQQA ++ + +S + Y +G+ + ++ Sbjct: 189 ALTMLANIYTTTGQYQQALVSSQQLLQLNQKSTQLGVLADTYNNIGVLHQKLEE-----P 243 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + E+ +S V R + + N IG Y ++ ++ A+ + Sbjct: 244 TKALAAFNQALPLYEQLPSS--VVYQRKKINLLTN--------IGTIYTQQRQFGNALNQ 293 Query: 213 FQLVLA 218 +Q + Sbjct: 294 YQKGVK 299 >gi|224534083|ref|ZP_03674666.1| hypothetical protein BBUCA112A_0219 [Borrelia burgdorferi CA-11.2a] gi|224512782|gb|EEF83150.1| hypothetical protein BBUCA112A_0219 [Borrelia burgdorferi CA-11.2a] Length = 1065 Score = 40.1 bits (93), Expect = 0.38, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK+ N+ A ++ P + + A +G QA S E+ Sbjct: 894 LYLKASINLKKGNYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 950 Query: 120 YI 121 I Sbjct: 951 II 952 Score = 39.7 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117 + ++ NF ++ +Y N F A+K ++ + ++ K +++ Sbjct: 827 KAGIVSNNLGNFKQSEKYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 880 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175 + I P + +Y YL + + + S ++E+ S Y+ Sbjct: 881 NKAIDLNP--EKSEY-LYLKASINLKK--------GNYQNAISLYSLVIEKNPENTSAYI 929 Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222 A+ Y G A +E +G Y K Y AI F+ + N Sbjct: 930 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 986 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259 EA L + + A++++ ++ P+ Sbjct: 987 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1024 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 83/279 (29%), Gaps = 74/279 (26%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSR 85 ++A + + + + Y + Q + Y+ ++ K + + + E F+ + Sbjct: 693 TLAQAYENNGDLLKAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDP 752 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +K+L K ++A E+ I KN YY G++ Sbjct: 753 KH------KKALHNKGIALMMLNKNKKAIESFEKAIQI---DKNYSTAYYQKGIA----- 798 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------------RFYVTVGR------ 186 + D + + + ++ N Y A Y+ Sbjct: 799 EEKNGDMQQAFESFKNAYNLDKK-PN--YALKAGIVSNNLGNFKQSEKYLNFFNANAKKP 855 Query: 187 NQLAAKEVEIGRY------------------------Y--------LKRGEYVAAIPRFQ 214 N++A + I ++ Y LK+G Y AI + Sbjct: 856 NEIAIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKGNYQNAISLYS 915 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 LV+ + A L +AY +A + I Sbjct: 916 LVIEKNPENTSAY---INLAKAYEKSGNKSQAISTLEKI 951 Score = 35.5 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 11/124 (8%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + ++ D + + + A + + KA + + + ++ + Sbjct: 678 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNTQEDHYKLGII 730 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 ++ KY+ + ++ I P+ K + G++ + ++ K ++ Sbjct: 731 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 779 Query: 164 RIVE 167 + ++ Sbjct: 780 KAIQ 783 >gi|308497022|ref|XP_003110698.1| hypothetical protein CRE_04860 [Caenorhabditis remanei] gi|308242578|gb|EFO86530.1| hypothetical protein CRE_04860 [Caenorhabditis remanei] Length = 242 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 13/99 (13%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 AV +G + D ++ ++ R KA +F A +F P + Sbjct: 101 AVALPMGDSSKEPTDEEVEKASEERG------KAQEAFSNGDFDAALTHFTAAIEANPGS 154 Query: 91 G--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 A+++ ++ + A + ++ I+ P+S Sbjct: 155 AMLHAKRANVLL-----KLKRPISAIADCDKAISINPDS 188 >gi|300869924|ref|YP_003784795.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] gi|300687623|gb|ADK30294.1| TPR domain protein [Brachyspira pilosicoli 95/1000] Length = 434 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 61/193 (31%), Gaps = 30/193 (15%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 ++ + ++ A + + K + Y G+Y A I Sbjct: 7 YIASEKYNLAIKKLRDILSKNKSHNKSYKIYKIIGDCYYKMGEYPFAIVEYRHAIDTGDN 66 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 S +S + + + + L +++ Y Sbjct: 67 SPETV-------ISLGRSLNAIGR----KEESLAQFLSLLKL--GGEYKVNVS------- 106 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +EIG+ Y G+Y A F+ L N D+ +EA+ YV+ +EA Sbjct: 107 -------IEIGKIYYDNGQYNTAFQFFENALEN--DST-NKEALKYKAYCYVSAGNYNEA 156 Query: 247 REVVSLIQERYPQ 259 +++ I +YP Sbjct: 157 IVIMNGIINKYPN 169 Score = 35.5 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 3/71 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E ++ ++ A+++F + A K A+ SAG Y +A + I Sbjct: 108 EIGKIYYDNGQYNTAFQFFENALENDSTNKEALKYK---AYCYVSAGNYNEAIVIMNGII 164 Query: 122 TQYPESKNVDY 132 +YP ++Y Sbjct: 165 NKYPNDPALNY 175 >gi|224532142|ref|ZP_03672774.1| tetratricopeptide repeat domain protein [Borrelia valaisiana VS116] gi|224511607|gb|EEF82013.1| tetratricopeptide repeat domain protein [Borrelia valaisiana VS116] Length = 1011 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 64/182 (35%), Gaps = 34/182 (18%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 ++ + ++ K++++ + I P + ++Y YL + + Sbjct: 805 AIYNLSIAKFENNKFEESLETINKAINLNP--EKIEY-LYLKASINLKN--------KNY 853 Query: 156 KLMLQYMSRIVERYTN--SPYVKGARFYVTVGRNQLAAKEVE-------------IGRYY 200 + + + ++ + S Y+ A+ Y +G A +E +G Y Sbjct: 854 QNAISLYNLVIAKNPENTSAYINLAKAYEKLGNKTQAISTLEKIINKNNKLALNNLGILY 913 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS---LIQERY 257 K +Y AI F+ + N EA L + + A++++ ++ Sbjct: 914 KKEKKYQKAIEIFEKAIIN-----SDIEAKYNLATTLIEINDNARAKDLLKEYTKLKPNN 968 Query: 258 PQ 259 P+ Sbjct: 969 PE 970 Score = 38.9 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK +N+ A +N P + + A G QA S E+ Sbjct: 840 LYLKASINLKNKNYQNAISLYNLVIAKNPEN---TSAYINLAKAYEKLGNKTQAISTLEK 896 Query: 120 YI 121 I Sbjct: 897 II 898 >gi|218781559|ref|YP_002432877.1| rhomboid family protein [Desulfatibacillum alkenivorans AK-01] gi|218762943|gb|ACL05409.1| Rhomboid family protein [Desulfatibacillum alkenivorans AK-01] Length = 484 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 42/132 (31%), Gaps = 33/132 (25%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR---- 212 L+ + + + +P + + L + Y EY AA+ R Sbjct: 348 EALKLLFLVEKSQPENPSIHKTAARLLAA---LGGDSAAVADVY---REYTAAVKRPALP 401 Query: 213 -------------------FQLVLANY----SDAEHAEEAMARLVEAYVALALMDEAREV 249 + ++ + D A++ L AY + + ++A + Sbjct: 402 AGLHLRLVKALARQGLLKEAEKIVGAFLRQKPDEPGVASALSALGHAYKSRGMDEKAAKC 461 Query: 250 VSLIQERYPQGY 261 +++ +YP+ Sbjct: 462 FRILERKYPRSQ 473 >gi|149376327|ref|ZP_01894090.1| hypothetical protein MDG893_05329 [Marinobacter algicola DG893] gi|149359341|gb|EDM47802.1| hypothetical protein MDG893_05329 [Marinobacter algicola DG893] Length = 955 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 3/86 (3%) Query: 180 FYVTVGRNQLAAKEVEIGRYYL---KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 R++LA E + + E AI ++ +LA Y + ++ + +L A Sbjct: 86 AKQVAVRHRLADLEFQRAENTMVETAMDEMAGAIEAYEQLLAEYPERPGNDQVLYQLARA 145 Query: 237 YVALALMDEAREVVSLIQERYPQGYW 262 Y + DE ++ + +P + Sbjct: 146 YDLRGMSDEHLATMTTLVNEHPDSKF 171 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 45/162 (27%), Gaps = 18/162 (11%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML-------- 159 +Y A + E YI P S Y++ + D K Sbjct: 310 EQYTDAIDVFERYIDARPLSPWAPR-YHMRIIDTLAQA-GFTADIPDRKAAFVRDYGIHG 367 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG---RYYLKRGEYVAAIPRFQLV 216 Y+ + + + + +LA + + Y A ++ Sbjct: 368 AYLQQA-----DDETAQYIGQQLEELIPELANRHYVLAGETEGVESDDHYRQAAVYYEAF 422 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 + E + L E +V LA EA E + +P Sbjct: 423 ADTFPAHPRTPEMLFLLGETHVELAQWPEAIEAFERVAYDFP 464 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 43/132 (32%), Gaps = 17/132 (12%) Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y+QAA E + +P + +L+G ++ ++ + ++ R+ Sbjct: 409 DDHYRQAAVYYEAFADTFPAHPRTPEMLFLLGETHVELAQWP--------EAIEAFERVA 460 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEV------EIGRYYLKRGEYVAAIPRFQLVLANY 220 + + LA +E E Y E+ + R Q + + Sbjct: 461 YDFPWEGEPPERAAEAGYA-SVLAFREYARTWPREPAETYNDYAEFQQ-LNR-QRFVNAF 517 Query: 221 SDAEHAEEAMAR 232 D +EE + Sbjct: 518 PDDPRSEEVLYI 529 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 38/116 (32%), Gaps = 13/116 (11%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 R + + E A+ + + A E + Q ++P + L A G + Sbjct: 102 RAENTMVETAMDEM-----AGAIEAYEQLLAEYPERPGNDQVLYQLARAYDLRGMSDEHL 156 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + + ++P+SK + G D+ + R Q +++ Sbjct: 157 ATMTTLVNEHPDSKFWVEAQFRRG--------DLLFSNRRYAEAEQAFRTVIDADP 204 >gi|115378507|ref|ZP_01465664.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|310819976|ref|YP_003952334.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115364476|gb|EAU63554.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|309393048|gb|ADO70507.1| tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 1369 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 39/137 (28%), Gaps = 22/137 (16%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-- 108 D + +R + +F E + +A + + ++ P ++ Y G Sbjct: 1248 AADPKRKRVLGAIGDVFFSEGRWDEAIRRYEKALKEAP----------ELTYIYYKIGRA 1297 Query: 109 --KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 + +Q + Y N Y +G +Y R K + + Sbjct: 1298 WSEREQPGRAIDWYKKAVTAEPNNAMAQYYLGFAYKAKGRR--------KEATAAFQQYL 1349 Query: 167 ERYTNSPYVKGARFYVT 183 N+ + + Sbjct: 1350 SLKPNAEDKRDIEDEIA 1366 >gi|17229169|ref|NP_485717.1| hypothetical protein alr1677 [Nostoc sp. PCC 7120] gi|17135497|dbj|BAB78043.1| alr1677 [Nostoc sp. PCC 7120] Length = 280 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 22/175 (12%), Positives = 52/175 (29%), Gaps = 35/175 (20%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSV---------TDVRYQREVYEKAVLFLKEQ 71 K LTI A+ + ++++V + + T+ + Y + + Sbjct: 14 KRVLTIGVLTALSAITSVSCSNNKEVLVTEIGVNPPSRRTTNNSQAGQFYVQGQRQHAQG 73 Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASLGEEYITQYPE 126 + A +++ P + +A+ + G Q+A + E I Sbjct: 74 DSQAAIASYDKAIGLDP--DYS------AAYRGRGLAYFDLGDKQKAIADYNEAIRL--- 122 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 S N + G + A + + + + + N Y + Sbjct: 123 SPNDAEAFNSRGNARASLGDNAG--------AITDYNEAIRLSPN--YAEAYNNR 167 >gi|310794486|gb|EFQ29947.1| tetratricopeptide [Glomerella graminicola M1.001] Length = 885 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 43/140 (30%), Gaps = 22/140 (15%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSA 107 D + Y ++ +Q + KAYE + Q P + Y Sbjct: 289 AADQGDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQI 342 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y+ A I P + V+Y +G Y + L R E Sbjct: 343 NQYRDALDAYSRAIRLNP---FISEVWYDLGTLYESCNNQIS-------DALDAYQRAAE 392 Query: 168 RYTNSPYVKGARFYVTVGRN 187 +P++ + + + RN Sbjct: 393 LDPQNPHI---KARLQLLRN 409 >gi|229541486|ref|ZP_04430546.1| Tetratricopeptide TPR_2 repeat protein [Bacillus coagulans 36D1] gi|229325906|gb|EEN91581.1| Tetratricopeptide TPR_2 repeat protein [Bacillus coagulans 36D1] Length = 503 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 78/239 (32%), Gaps = 36/239 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 + S D+V E Y K V + KA +Y + ++ P+ V Sbjct: 2 SKDSKLRQEHDNVLSFVPTGEYYFNKGVQAYDRHDIKKALKYMQRAAQLDPYDPV-IACQ 60 Query: 98 LMSAFVQYSAGKYQQAASLGEEYI-TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L + A +++A + + P + +Y + +YA D Sbjct: 61 LAIIYTHCEA--FRKAIDIFRHILAKLDPG---MVECHYFIANNYA--------DLGFFN 107 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGR---------------NQLAAKEVEIGRYYL 201 L + + +E Y + A + V +A +E R YL Sbjct: 108 EALYHARKYLELDPFGEYREEAEELIYVLDLEEEDETGAISYEQDELMARQEE--ARRYL 165 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + G + A+ ++ Y D A + A L ++A EV+ + E+ P Sbjct: 166 EAGHFDTALSELHKLIKKYPDFWSAY---NNMALACFYLGQTEKAVEVLMDLLEKNPGN 221 >gi|88602287|ref|YP_502465.1| TPR repeat-containing protein [Methanospirillum hungatei JF-1] gi|88187749|gb|ABD40746.1| TPR repeat [Methanospirillum hungatei JF-1] Length = 634 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 8/82 (9%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y++ + L+ +N+ +A F + + P ++ G + A + Sbjct: 34 YDQGLTALENENYEEAISNFLKAVEEDPQN---EQAYSKLGGSYLMTGDVESAIYAFQNV 90 Query: 121 ITQYPES----KNVDYVYYLVG 138 PE+ N+ Y YLVG Sbjct: 91 TNLNPENGVAWGNIGY-LYLVG 111 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 20/91 (21%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQQA 113 Y K +++ + + S A F + P A Y G Y +A Sbjct: 320 YWKGQVYIDQSDRSGAIAEFRTATELNP----------NLADAWYYLGGLLSDEGSYDEA 369 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + ++ I P ++ YYL G++ Q+ Sbjct: 370 TTALDKMIELRP---DLADPYYLKGLTQYQL 397 >gi|9294180|dbj|BAB02082.1| peptidylprolyl isomerase; FK506-binding protein [Arabidopsis thaliana] Length = 555 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 52/151 (34%), Gaps = 26/151 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ----CSRDFPFA-GVARKSL-------LMSAFVQYSAGK 109 E+ K +S A + + + D F+ +++ L A + Sbjct: 405 EEGNSKFKGGKYSLASKRYEKAVKFIEYDTSFSEEEKKQAKALKVACNLNDAACKLKLKD 464 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+QA L + + ES NV Y +Y ++ D+ + K L E Sbjct: 465 YKQAEKLCTKVLEL--ESTNVK-ALYRRAQAYMELS-DLDLAEFDVKKAL-------EID 513 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 N+ VK + + + KE ++Y Sbjct: 514 PNNREVKLEQKRLKEKMKEFNKKE---AKFY 541 >gi|197313662|ref|NP_001127890.1| prolyl 3-hydroxylase 2 isoform b [Homo sapiens] gi|7022921|dbj|BAA91769.1| unnamed protein product [Homo sapiens] gi|13477143|gb|AAH05029.1| LEPREL1 protein [Homo sapiens] gi|119598516|gb|EAW78110.1| leprecan-like 1, isoform CRA_b [Homo sapiens] gi|119598517|gb|EAW78111.1| leprecan-like 1, isoform CRA_b [Homo sapiens] gi|325463975|gb|ADZ15758.1| leprecan-like 1 [synthetic construct] Length = 527 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P+ ++V L + Y + + D D A+ + Sbjct: 133 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSIDP-ASIEARED 186 Query: 162 MSRIVERY 169 ++ V+R+ Sbjct: 187 LTMFVKRH 194 >gi|71650193|ref|XP_813799.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70878718|gb|EAN91948.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 703 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 25/189 (13%), Positives = 54/189 (28%), Gaps = 41/189 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + + K+ ++ +A + ++ R P K+L F Y A E + Sbjct: 270 QRGLAYRKKGDYLRAIDEYSAALRLDPKNF---KALFNRGFCSDKVEDYNAAIRDYEAAM 326 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P Y Y +Y + K + + + +N+ Sbjct: 327 KLEPG-----YAY-----TYYNLGISYDRWGGHYKEAIAMFDKAIALDSNN--------- 367 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAY 237 +Y RG + +++ + +Y+ A +A Y Sbjct: 368 ---------------ADFYHNRGFSQRKLGKYREAVEDYTMALSLDPQHFKAYYNRAFCY 412 Query: 238 VALALMDEA 246 L A Sbjct: 413 DKLGEGANA 421 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 68/237 (28%), Gaps = 55/237 (23%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA----- 107 D + + ++ + K ++++ A + + P A+ Y+ Sbjct: 295 DPKNFKALFNRGFCSDKVEDYNAAIRDYEAAMKLEPG----------YAYTYYNLGISYD 344 Query: 108 ---GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 G Y++A ++ ++ I +S N D+ Y+ G S + ++ + Sbjct: 345 RWGGHYKEAIAMFDKAIAL--DSNNADF-YHNRGFS--------QRKLGKYREAVEDYTM 393 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIP 211 + A + ++L I Y Y RG + Sbjct: 394 ALSLDPQH---FKAYYNRAFCYDKLGEGANAIADYTKAIAIQDDNPNAYHNRGAAMEKAG 450 Query: 212 RFQLVLANY-------SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 R +A+Y A AY D A + ++ P Sbjct: 451 RLDDAIADYTRAIQLDDGNPFTYNARGI---AYDRRGKSDAALQDLTQAIALSPNNP 504 >gi|332846934|ref|XP_001173695.2| PREDICTED: cell division cycle protein 27 homolog isoform 1 [Pan troglodytes] Length = 763 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 525 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 574 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 575 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 630 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 631 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 685 Query: 237 YVALALMDEA 246 Y L A Sbjct: 686 YKKLGQTHLA 695 >gi|332243161|ref|XP_003270751.1| PREDICTED: cell division cycle protein 27 homolog isoform 3 [Nomascus leucogenys] Length = 763 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 525 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 574 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 575 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 630 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 631 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 685 Query: 237 YVALALMDEA 246 Y L A Sbjct: 686 YKKLGQTHLA 695 >gi|311267004|ref|XP_003131357.1| PREDICTED: cell division cycle protein 27 homolog, partial [Sus scrofa] Length = 741 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 503 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 552 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 553 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 608 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 609 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 663 Query: 237 YVALALMDEA 246 Y L A Sbjct: 664 YKKLGQTHLA 673 >gi|297530018|ref|YP_003671293.1| hypothetical protein GC56T3_1717 [Geobacillus sp. C56-T3] gi|297253270|gb|ADI26716.1| TPR repeat-containing protein [Geobacillus sp. C56-T3] Length = 1385 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 3/68 (4%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +AV++L+E KA + + P +AR++L++ G+YQ+AA+L E Y Sbjct: 1239 QAVVWLQEGQHEKAERQLEEIVAEDP---LAREALMLLGEQYMETGRYQEAAALWERYAD 1295 Query: 123 QYPESKNV 130 YPE + + Sbjct: 1296 WYPEDEEL 1303 >gi|294055970|ref|YP_003549628.1| Tetratricopeptide TPR_4 [Coraliomargarita akajimensis DSM 45221] gi|293615303|gb|ADE55458.1| Tetratricopeptide TPR_4 [Coraliomargarita akajimensis DSM 45221] Length = 876 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 56/185 (30%), Gaps = 20/185 (10%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 KA L ++ + + + + A +S L A +AG + A Sbjct: 591 KAELLIRSGDADGGRKVLESLRVGYASSAAAERSYLREANFYSAAGNLEAAQQTLLVLAD 650 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 Y ES Y G+ ++ +SR+ E Y V A+ Sbjct: 651 TYSESPLASQAIYEAGL------LGERRGVEHYADAVRILSRLAETYPEDALVFPAQLKQ 704 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 + ++ A ++ ++ Y + AM + +ALA Sbjct: 705 ADLLRLM--------------NDFSGAQIIYENLINRYPEHPLLYIAMLSRADCMLALAR 750 Query: 243 MDEAR 247 D AR Sbjct: 751 NDLAR 755 Score = 38.9 bits (90), Expect = 0.83, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 73/217 (33%), Gaps = 31/217 (14%) Query: 58 REVYEKAVLFLKEQ--NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + +YE +L + +++ A ++ + +P + + L A + + A Sbjct: 660 QAIYEAGLLGERRGVEHYADAVRILSRLAETYPEDALVFPAQLKQADLLRLMNDFSGAQI 719 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + E I +YPE Y+ +S A + + + A L+ S ++ER Sbjct: 720 IYENLINRYPEHPL----LYIAMLSRADCMLALARNDLA---RLEDASLVLER------- 765 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-------IPRF----QLVLANYSDAE 224 + + AA + +R + AA RF + V+ Sbjct: 766 LLDLPGLPLDVQAEAAYKWAFAL--QRREMWDAAQEVYGLLSDRFLLNAENVVQLGPTGR 823 Query: 225 H-AEEAMARLVEAYVALALMDEARE-VVSLIQERYPQ 259 + AM L E +EAR +I P Sbjct: 824 YWVSRAMLDLGELLQNNGDAEEARRVYRKIIAYNLPG 860 >gi|282897129|ref|ZP_06305131.1| TPR repeat protein [Raphidiopsis brookii D9] gi|281197781|gb|EFA72675.1| TPR repeat protein [Raphidiopsis brookii D9] Length = 1279 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 34/245 (13%), Positives = 66/245 (26%), Gaps = 68/245 (27%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQ-CS--------------RDFPFAG-------- 91 Y Y + + + N+ A + + + + Sbjct: 679 DYADAYYNRGIAYYDLGNYQSAIDDYTRSIEIKPNCADTYVGRGTALYKLGDSQGAINDF 738 Query: 92 -VARKSLLMSAFVQ-------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 A A Y G YQ A + + P N Y G+ + Sbjct: 739 HHALDIDASYADAYNNRGIVRYELGDYQGAINDFNHALNINP---NYAQAYNNRGIVRYE 795 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY---- 199 + R + ++ + V NS Y + + R L +++ I + Sbjct: 796 L--------RDNQGAMEDFNHAVNI--NSNYAQAYNNR-GIVRICLGERQLAIEDFSQAI 844 Query: 200 ---YLKRGEYVAAIPRF---------QLVLANYSDA----EHAEEAMARLVEAYVALALM 243 Y Y I R Q + +++ A + +A AY L Sbjct: 845 IIAYNYTESY---INRGYARYELGNRQKAIEDFNQALNINPNYAQAYNNRGVAYTDLGDR 901 Query: 244 DEARE 248 + A++ Sbjct: 902 EWAKD 906 Score = 35.5 bits (81), Expect = 8.7, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 43/143 (30%), Gaps = 27/143 (18%) Query: 38 WERQSSRDVYLDSVTDV----RYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92 + +++ T E Y + + + + A + + Q P Sbjct: 589 CSELGDKPGAVNNYTQALNINPDDPETYIARGLTRSELGDNQGAIDDYTQALNLNP---- 644 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE----SKNVDYVYYLVGMSYAQMIRDV 148 A++ + G + + + I Y + S + YY G++Y Sbjct: 645 ------DYAYIYNNRGVVRSDIADYQRAIDDYTQALNISPDYADAYYNRGIAYY------ 692 Query: 149 PYDQRATKLMLQYMSRIVERYTN 171 D + + +R +E N Sbjct: 693 --DLGNYQSAIDDYTRSIEIKPN 713 >gi|237809814|ref|YP_002894254.1| peptidase C39 bacteriocin processing [Tolumonas auensis DSM 9187] gi|237502075|gb|ACQ94668.1| peptidase C39 bacteriocin processing [Tolumonas auensis DSM 9187] Length = 463 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 7/78 (8%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 ++ V +TD+ + Y+ A L+ +KA E F P + A L Sbjct: 44 ANGSVISSELTDLSAALQQYKTAHDPLQ----TKAIEGF---LNSHPHSAWANSLWLNLG 96 Query: 102 FVQYSAGKYQQAASLGEE 119 + AG+Y A ++ Sbjct: 97 LIYQQAGRYSDALQAYDK 114 >gi|194384564|dbj|BAG59442.1| unnamed protein product [Homo sapiens] Length = 763 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 525 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 574 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 575 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 630 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 631 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 685 Query: 237 YVALALMDEA 246 Y L A Sbjct: 686 YKKLGQTHLA 695 >gi|158338735|ref|YP_001519912.1| hypothetical protein AM1_5643 [Acaryochloris marina MBIC11017] gi|158308976|gb|ABW30593.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 2092 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 5/72 (6%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARKSLLMSAFVQYS 106 R ++ E+ ++ N++ A ++ Q + P A + +S L A+ Y Sbjct: 1279 QGESSRTLPKLLEEGRQAYQQANYADAVVHWTQAATQLSKHPDAYASVQSHLALAY-HYL 1337 Query: 107 AGKYQQAASLGE 118 G ++QA S E Sbjct: 1338 -GDWEQARSAIE 1348 >gi|148706199|gb|EDL38146.1| ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome, isoform CRA_b [Mus musculus] Length = 1221 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 35/140 (25%), Gaps = 42/140 (30%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 111 EDYSKALSSYQRYYSL-----QTDYWKNAAFLYGLGLVYFYY--------NAFQWAIRAF 157 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKE------------------------VEIGR 198 ++ N K + E I Sbjct: 158 QEVLYVDPNFCRAKEIHLRLGFMFKMNTDYESSLKHFQLALIDCNVCTLSSVEIQFHIAH 217 Query: 199 YYLKRGEYVAAIPRFQLVLA 218 Y + +Y +A ++ +L Sbjct: 218 LYETQRKYHSAKAAYEQLLQ 237 >gi|138896655|ref|YP_001127108.1| TPR repeat-containing protein [Geobacillus thermodenitrificans NG80-2] gi|134268168|gb|ABO68363.1| TPR-repeat-containing protein [Geobacillus thermodenitrificans NG80-2] Length = 432 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 41/115 (35%), Gaps = 15/115 (13%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 E+A L+++ F++A E +P ++ A + G ++A E Sbjct: 97 ERARHLLEQERFAEAIEALEAIVSRYPEFWSAHN-----NLALAYFYNGDVERAKQKLLE 151 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + + P + L + A + +DQ + + ++ + + Y Sbjct: 152 VLKRDPGN--------LHALCNALVFAYYLHDQEEVAALCETLASVYPFFREHQY 198 >gi|110665738|ref|NP_033510.2| histone demethylase UTY [Mus musculus] gi|147897749|gb|AAI40404.1| Ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome [synthetic construct] gi|148706198|gb|EDL38145.1| ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome, isoform CRA_a [Mus musculus] Length = 1212 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 35/140 (25%), Gaps = 42/140 (30%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 102 EDYSKALSSYQRYYSL-----QTDYWKNAAFLYGLGLVYFYY--------NAFQWAIRAF 148 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKE------------------------VEIGR 198 ++ N K + E I Sbjct: 149 QEVLYVDPNFCRAKEIHLRLGFMFKMNTDYESSLKHFQLALIDCNVCTLSSVEIQFHIAH 208 Query: 199 YYLKRGEYVAAIPRFQLVLA 218 Y + +Y +A ++ +L Sbjct: 209 LYETQRKYHSAKAAYEQLLQ 228 >gi|118371952|ref|XP_001019174.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89300941|gb|EAR98929.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 772 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 78/243 (32%), Gaps = 64/243 (26%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP------------FA---------GVARKS-L 97 +Y A ++L+ N+S A E N R FP ++ ++KS Sbjct: 515 LYSLAKVYLETFNYSNAIEILNTLVRLFPSNDLYLATLALAYSEIKDEQKVMEFSQKSLQ 574 Query: 98 LM---------SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 + A+ + + Q A + I P + Y+ Y I Sbjct: 575 INPQNILALNCLAYYYFLKQQNQLAIQCLQSSIKVNPCNFR---AYF-----YQAQILLS 626 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYV-----------KGARFYVTVGRNQLAAKEV--- 194 L +Y + ++ N+ ++ A Y A E+ Sbjct: 627 EGKHEDAILSAKYSMQQNSKFPNAQFLLGQVFEQIGKMDKAIKYFQEAIMIQAKYELPYI 686 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 ++ + Y K+G+Y A+ +L L N + + Y L + E ++ +S Sbjct: 687 DLSQIYRKKGQYDDALFICKLALQNNIKS----------AKIYNELGKIYEKKQYLSQ-A 735 Query: 255 ERY 257 Y Sbjct: 736 INY 738 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 67/190 (35%), Gaps = 47/190 (24%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE--SKNVD 131 +A Y ++++P++ +L + Y+ A + ++ I P S Sbjct: 434 KEAISY----NQNYPYS------ILQIGKCYFKKKMYEDAITSFKQVIKLLPTIFSP--- 480 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 YY +G+ Y + +DQ + Y ++ +E NS +N L Sbjct: 481 --YYCLGIIYYER---SEFDQ-----SISYFNKALEL--NSSN-----------QNCL-- 515 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE-VV 250 + + YL+ Y AI ++ + + +A L AY + + E Sbjct: 516 --YSLAKVYLETFNYSNAIEILNTLVRLFPSNDLY---LATLALAYSEIKDEQKVMEFSQ 570 Query: 251 SLIQERYPQG 260 +Q PQ Sbjct: 571 KSLQIN-PQN 579 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 14/123 (11%), Positives = 41/123 (33%), Gaps = 18/123 (14%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKY 110 + Y + + + K++ + A F Q + P F+ + Y ++ Sbjct: 440 NQNYPYSILQIGKCYFKKKMYEDAITSFKQVIKLLPTIFSPY-----YCLGIIYYERSEF 494 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 Q+ S + + ++N Y + Y + ++ ++ +V + Sbjct: 495 DQSISYFNKALELNSSNQN---CLYSLAKVYLETFNYSN--------AIEILNTLVRLFP 543 Query: 171 NSP 173 ++ Sbjct: 544 SND 546 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 68/181 (37%), Gaps = 27/181 (14%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 Q E++++A + + +A + + + L + + +++ S+ Sbjct: 308 QTELFQQAQKEIDNHKYQEAQVTLERLVKI---NTHNDQYLALLGLTHLEQYQCEESRSI 364 Query: 117 GEEYITQYPESKN----VDYVYYLV-----GMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 ++ ++ P+++ + Y YY M Y Q + + + + + L Y + ++ Sbjct: 365 SQKCLSINPKNEIALSCMGYYYYEKNDLKQAMCYLQ--KCLNLNPKNYR-ALTYKAFVLS 421 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKE------VEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + + + ++ + ++IG+ Y K+ Y AI F+ V+ Sbjct: 422 N------QQKLDEELLTLKEAISYNQNYPYSILQIGKCYFKKKMYEDAITSFKQVIKLLP 475 Query: 222 D 222 Sbjct: 476 T 476 >gi|73965118|ref|XP_860014.1| PREDICTED: similar to Cell division cycle protein 27 homolog (CDC27Hs) (H-NUC) isoform 5 [Canis familiaris] Length = 764 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 526 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 575 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 576 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 631 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 632 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 686 Query: 237 YVALALMDEA 246 Y L A Sbjct: 687 YKKLGQTHLA 696 >gi|74216250|dbj|BAE25094.1| unnamed protein product [Mus musculus] Length = 1149 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 35/140 (25%), Gaps = 42/140 (30%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 39 EDYSKALSSYQRYYSL-----QTDYWKNAAFLYGLGLVYFYY--------NAFQWAIRAF 85 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKE------------------------VEIGR 198 ++ N K + E I Sbjct: 86 QEVLYVDPNFCRAKEIHLRLGFMFKMNTDYESSLKHFQLALIDCNVCTLSSVEIQFHIAH 145 Query: 199 YYLKRGEYVAAIPRFQLVLA 218 Y + +Y +A ++ +L Sbjct: 146 LYETQRKYHSAKAAYEQLLQ 165 >gi|6175094|sp|P79457|UTY_MOUSE RecName: Full=Histone demethylase UTY; AltName: Full=Male-specific histocompatibility antigen H-YDB; AltName: Full=Ubiquitously transcribed TPR protein on the Y chromosome; AltName: Full=Ubiquitously transcribed Y chromosome tetratricopeptide repeat protein gi|3786392|gb|AAC67385.1| male-specific histocompatibility antigen H-YDb [Mus musculus] Length = 1212 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 35/140 (25%), Gaps = 42/140 (30%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 102 EDYSKALSSYQRYYSL-----QTDYWKNAAFLYGLGLVYFYY--------NAFQWAIRAF 148 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKE------------------------VEIGR 198 ++ N K + E I Sbjct: 149 QEVLYVDPNFCRAKEIHLRLGFMFKMNTDYESSLKHFQLALIDCNVCTLSSVEIQFHIAH 208 Query: 199 YYLKRGEYVAAIPRFQLVLA 218 Y + +Y +A ++ +L Sbjct: 209 LYETQRKYHSAKAAYEQLLQ 228 >gi|1835147|emb|CAA70422.1| male-specific histocompatibility antigen H-YDb [Mus musculus] Length = 1186 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 35/140 (25%), Gaps = 42/140 (30%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 102 EDYSKALSSYQRYYSL-----QTDYWKNAAFLYGLGLVYFYY--------NAFQWAIRAF 148 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKE------------------------VEIGR 198 ++ N K + E I Sbjct: 149 QEVLYVDPNFCRAKEIHLRLGFMFKMNTDYESSLKHFQLALIDCNVCTLSSVEIQFHIAH 208 Query: 199 YYLKRGEYVAAIPRFQLVLA 218 Y + +Y +A ++ +L Sbjct: 209 LYETQRKYHSAKAAYEQLLQ 228 >gi|304407284|ref|ZP_07388937.1| TPR repeat-containing protein [Paenibacillus curdlanolyticus YK9] gi|304343725|gb|EFM09566.1| TPR repeat-containing protein [Paenibacillus curdlanolyticus YK9] Length = 587 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 5/57 (8%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++A + L+E F++A + + P F+ + A Y G++ +A Sbjct: 160 DQARILLEEGKFAQAVKLLEEIVEQHPEFSA----ARNNLALAFYYMGQFDRAMQTI 212 >gi|110669299|ref|YP_659110.1| TPR repeat-containing protein [Haloquadratum walsbyi DSM 16790] gi|109627046|emb|CAJ53522.1| tetratricopeptide repeat protein [Haloquadratum walsbyi DSM 16790] Length = 246 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 11/109 (10%), Positives = 32/109 (29%), Gaps = 17/109 (15%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 K + + + +A + + + + A + A+ + AG+ + A E Sbjct: 105 NKGAAHGQLEEWDEAIGSYKEALHIDDE---SEHAASAETNLAYALWEAGETESALQHAE 161 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 + P +Y G +++ + + + Sbjct: 162 RAVKVDPRFPQ---AWYNRG--------FFLHERGLNEEAVSAFDNAIR 199 >gi|39995514|ref|NP_951465.1| TPR domain protein [Geobacter sulfurreducens PCA] gi|39982277|gb|AAR33738.1| TPR domain protein [Geobacter sulfurreducens PCA] Length = 748 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 24/121 (19%) Query: 132 YV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 Y Y + A+ + D ++A VER+ P+V R +L Sbjct: 541 YAPELYRRILHDAEQLGDPTLMEKAAG-------EFVERFPAHPWV----QRF---REEL 586 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AA E RG++ + R +LA+ E++ L ++ A +A Sbjct: 587 AAVE-------YNRGDFQRVVGRLSGMLAS-GTRPEYAESLYYLGKSLDASGNRRDAERA 638 Query: 250 V 250 + Sbjct: 639 M 639 >gi|45357839|ref|NP_987396.1| hypothetical protein MMP0276 [Methanococcus maripaludis S2] gi|45047399|emb|CAF29832.1| Conserved hypothetical protein [Methanococcus maripaludis S2] Length = 344 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 37/120 (30%), Gaps = 14/120 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + + + K +LK QN+ A E FN P + A ++ Sbjct: 191 DEKMETALLGKGNSYLKLQNYESAIECFNTAETINPKSEYPP---YYKADAYRDTENFEY 247 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A +E + P + ++ G+ +M + + ++ + Sbjct: 248 ALKYYDEALEINPSNSDI---LISKGICLDKM--------KNYSAAISNFDLAIQLDPKN 296 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 45/161 (27%), Gaps = 37/161 (22%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y K K + K+ + +N+ +LL Y+ A Sbjct: 165 YNKGETQFKLGEYEKSIDSYNKALLIDEK------METALLGKGNSYLKLQNYESAIECF 218 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 T P+S+ Y D D + L+Y +E ++ + Sbjct: 219 NTAETINPKSEYPPY-----------YKADAYRDTENFEYALKYYDEALEINPSNSDILI 267 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 ++ + + K Y AAI F L + Sbjct: 268 SK---GICLD--------------KMKNYSAAISNFDLAIQ 291 >gi|330840667|ref|XP_003292333.1| hypothetical protein DICPUDRAFT_99304 [Dictyostelium purpureum] gi|325077432|gb|EGC31145.1| hypothetical protein DICPUDRAFT_99304 [Dictyostelium purpureum] Length = 548 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 5/73 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y V+++K N+ A +YFN+ +D S M + G A +E Sbjct: 39 YNIGVMYIKSNNYRSAIDYFNRSIEQD----KYLAASYFMRGVAHHLGGDLNHAIVDYDE 94 Query: 120 YITQYPESKNVDY 132 +++ + +DY Sbjct: 95 TVSKLRGHEYIDY 107 >gi|307718566|ref|YP_003874098.1| hypothetical protein STHERM_c08780 [Spirochaeta thermophila DSM 6192] gi|306532291|gb|ADN01825.1| hypothetical protein STHERM_c08780 [Spirochaeta thermophila DSM 6192] Length = 305 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 30/95 (31%), Gaps = 13/95 (13%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + + + D+ + + E +FS+A E + Q Sbjct: 6 LVPAAILCLLVVTSCASSPRPDL----------AEAYFSLGNAYYDEGDFSRAVEAYTQA 55 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 R F+ + A G+Y +A +L E Sbjct: 56 LR---FSPHTPRIEYNLARTYIRMGEYDRAEALLE 87 >gi|228472629|ref|ZP_04057389.1| tetratricopeptide repeat domain protein [Capnocytophaga gingivalis ATCC 33624] gi|228276042|gb|EEK14798.1| tetratricopeptide repeat domain protein [Capnocytophaga gingivalis ATCC 33624] Length = 918 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 44/135 (32%), Gaps = 19/135 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + ++ +++A + P ++ + +Y +A E Sbjct: 384 YNRGQQLAQQGRYTEAIPDLQWVAAQ-PSFEWREDAIAALYGAYLNNHQYGKALEQAELL 442 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV-------ERYTNSP 173 I QYP+SK YL + +R P L+ +++ + S Sbjct: 443 IQQYPQSKGG----YLRKAAALSALRQYP-------QALEIYEKLIGESDAKDNDFYISG 491 Query: 174 YVKGARFYVTVGRNQ 188 Y + A Y+ + Sbjct: 492 YEETALAYIKYLNEK 506 Score = 36.6 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 37/176 (21%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 K L + G+Y++A L ++ ITQYP++ ++ +Y+ +Y +D Sbjct: 24 KKELKLIDSYFKEGQYEEAKKLLDKNITQYPKNGDIQ--FYMG--TYYYQKQDND----- 74 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 ++ R ++ N + LA+ E + Y +AI Sbjct: 75 --KARYHLLRALDELPNH----------VAAKEILASIE-------TTQKHYSSAICYVN 115 Query: 215 LVLANYS-DAEHAEE--AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 +L DAE + A+ RL EA ++ I+ YPQ + Sbjct: 116 ELLETRPYDAELWRKKIALYRLQ------GNDIEANRLLKRIRVIYPQDEQFKKDY 165 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 17/109 (15%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ---LAAKEVEIGRYYLKRGEYVAAIPR 212 K + + + +Y N Y+ N+ LA +G Y AIP Sbjct: 356 KEAYKVLEELFSKYPN--DADIRNNYLQYRYNRGQQLAQ-----------QGRYTEAIPD 402 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Q V A E E+A+A L AY+ +A E L+ ++YPQ Sbjct: 403 LQWVAAQ-PSFEWREDAIAALYGAYLNNHQYGKALEQAELLIQQYPQSK 450 >gi|47222450|emb|CAG12970.1| unnamed protein product [Tetraodon nigroviridis] Length = 788 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 65/214 (30%), Gaps = 56/214 (26%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L +V G Y +A + + + Y GM+Y + D + Sbjct: 56 ELAIGYVLIGNGLYDEAI---KHFSLLLQGDPELVSAIYGRGMAYGKKSLQ---DIKNAD 109 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVT----VGRNQLAAKEVEI-----GRYYLKRG--- 204 L L ++R++ N P V R + LA I R Y RG Sbjct: 110 LALYELNRVITLEPNWPEVYEQRAEILSPLGRISEALADLSKAIQLQPSARLYRHRGTLL 169 Query: 205 ----EYVAAIPRFQLVLANYSDAEHA---------------------EEAMAR------- 232 +YVAA+ FQ L + A +EA+ Sbjct: 170 FISEDYVAAMEDFQQSLELKKNQPIAMLYKGLTFFHRGLLKEAIETFKEALKLKSDFIDA 229 Query: 233 ---LVEAYVALALMDEAREVVS---LIQERYPQG 260 L +AY L + A E L+ + + Q Sbjct: 230 YKSLGQAYRELGDFESAMESFQRALLLDQNHIQS 263 >gi|17231874|ref|NP_488422.1| hypothetical protein all4382 [Nostoc sp. PCC 7120] gi|17133518|dbj|BAB76081.1| all4382 [Nostoc sp. PCC 7120] Length = 311 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 45/154 (29%), Gaps = 20/154 (12%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE------VYEKAVLFLKEQNFSKAYEYFN 81 F++A L G + + + + E Y ++ ++QN+ A F Sbjct: 112 FALAFANLGGSLLEGNNLQQANDYLQRALELEPRLGFAHYNLGLVRQQQQNWEGAIASFQ 171 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + + A + GK +A + + I P YY +G+ Sbjct: 172 KAVEL---SKNAPEPHYYLGISYLQQGKLNEAKNAFNQAIKINPRYSE---AYYNLGVVL 225 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 Q + L + E N P Sbjct: 226 FN--------QGQPQEALTAFRKSAEANPNYPNA 251 >gi|89072370|ref|ZP_01158949.1| hypothetical protein SKA34_06340 [Photobacterium sp. SKA34] gi|89051902|gb|EAR57354.1| hypothetical protein SKA34_06340 [Photobacterium sp. SKA34] Length = 683 Score = 39.7 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 40/128 (31%), Gaps = 33/128 (25%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A + + +A + F + + +Y A Y QA + Sbjct: 345 QQAYQTYTDGKYKQAAQDFE-----------SPQWK---GIAEYKAKNYAQAIETLK--- 387 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P ++ Y +G +YAQ + + ++ + N P + Sbjct: 388 ---PLHDSMS--QYNLGNAYAQS--------GKLQQAVDTYEKLQKADPNYP---DVKKN 431 Query: 182 VTVGRNQL 189 + + + L Sbjct: 432 LDIVKKAL 439 >gi|225873528|ref|YP_002754987.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC 51196] gi|225794548|gb|ACO34638.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC 51196] Length = 300 Score = 39.7 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 39/116 (33%), Gaps = 19/116 (16%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +AV + N +A + P A + + + Y Y +A Sbjct: 141 EAVQCEEAGNIDEAVALYEAILAQAPG--HAPSA-INLGTIYYHRKDYARA-------ER 190 Query: 123 QYPESKNVD--YVYYLVGMSYAQMIRDVPYDQRATK--LMLQYMSRIVERYTNSPY 174 Y + D Y +++ + + QR T+ Q R+V RY ++ Y Sbjct: 191 LYRGATEADPNYA-----LAFFDLGNVLDELQRMTEAIEAYQAAIRLVPRYADAHY 241 >gi|113474480|ref|YP_720541.1| hypothetical protein Tery_0626 [Trichodesmium erythraeum IMS101] gi|110165528|gb|ABG50068.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101] Length = 2059 Score = 39.7 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 82/263 (31%), Gaps = 74/263 (28%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ--YSAGKYQQAASLGEE 119 +K + + F +A F + FP + + + +S + A E Sbjct: 1213 QKGNMLINLSRFDEAESVFQRLIEKFP-----HQPQGYDGYARLTHSFADWNLALKRWEN 1267 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I ++PE +G + ++ + R++E++ + P Sbjct: 1268 AIEKFPEH---------IG--FQTQKGNMLINLSRFDEAESVFQRLIEKFPHQPQGYEGY 1316 Query: 180 FYVTVGRNQLAAKEVEIGR-------------YYLKRGE-------YVAAIPRFQLVLAN 219 + N L E+ + R +Y+++G Y A F+ +++ Sbjct: 1317 ARLA---NHLGNWELALKRWENAINHLPHHFHFYVQKGNVLITLFRYQEAETLFEELISK 1373 Query: 220 YSDAEHAEEAMARL-------------------------------VEAYVALALMDEARE 248 Y H + +AR+ AY+ L D A++ Sbjct: 1374 YPHQHHGYDGLARVLMHAQKWELALTCWQTAMDKFPNNLVFLVGKANAYIELHKFDSAQD 1433 Query: 249 VVSLIQERYPQGYWARYVETLVK 271 + I +YP + + L K Sbjct: 1434 LADRIFRQYPN--YYQQKYGLQK 1454 Score = 35.9 bits (82), Expect = 6.3, Method: Composition-based stats. Identities = 27/199 (13%), Positives = 64/199 (32%), Gaps = 38/199 (19%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ--YSAGKYQQAASLGEE 119 +K + + F +A F + FP + + + Y + A E Sbjct: 329 QKGNILINLSRFDEAESVFQRLIEKFP-----HQPQGYDGYAKLTYRFADWNLALKRWEN 383 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I ++P +N+ + G + R R++E++ + P Sbjct: 384 AIEKFP--ENIGF-QTQKGNMLINLSR--------FDEAESVFQRLIEKFPHQPQGYDGY 432 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 +T ++ A+ R++ + + + + ++ + Sbjct: 433 ARLT--------HSFA---------DWNLALKRWENAIEKFPENIGFQTQKGNML---IN 472 Query: 240 LALMDEAREVVSLIQERYP 258 L+ DEA V + E++P Sbjct: 473 LSRFDEAESVFQRLIEKFP 491 Score = 35.9 bits (82), Expect = 6.3, Method: Composition-based stats. Identities = 27/199 (13%), Positives = 64/199 (32%), Gaps = 38/199 (19%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ--YSAGKYQQAASLGEE 119 +K + + F +A F + FP + + + Y + A E Sbjct: 1009 QKGNILINLSRFDEAESVFQRLIEKFP-----HQPQGYDGYAKLTYRFADWNLALKRWEN 1063 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I ++P +N+ + G + R R++E++ + P Sbjct: 1064 AIEKFP--ENIGF-QTQKGNMLINLSR--------FDEAESVFQRLIEKFPHQPQGYDGY 1112 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 +T ++ A+ R++ + + + + ++ + Sbjct: 1113 ARLT--------HSFA---------DWNLALKRWENAIEKFPENIGFQTQKGNML---IN 1152 Query: 240 LALMDEAREVVSLIQERYP 258 L+ DEA V + E++P Sbjct: 1153 LSRFDEAESVFQRLIEKFP 1171 >gi|254458973|ref|ZP_05072396.1| hypothetical protein CBGD1_1613 [Campylobacterales bacterium GD 1] gi|207084244|gb|EDZ61533.1| hypothetical protein CBGD1_1613 [Campylobacterales bacterium GD 1] Length = 306 Score = 39.7 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 52/144 (36%), Gaps = 17/144 (11%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC-SRDF--PFAGVARKSLLMSAF 102 S D EV + A ++ ++++ EY+ +++ + Sbjct: 177 TPKKSKIDSMSNAEVAKLAQQSYDKKYYTESIEYYTHLIKKNYKPAGSHY------KLGE 230 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + Y Y +A + ++ + Y ++ + + +S + + K + Sbjct: 231 IYYYRKNYAEAIAYFKKSASLYSKASYMPTLMLHTAVSMEKTGDE--------KNAKSFY 282 Query: 163 SRIVERYTNSPYVKGARFYVTVGR 186 + +V +Y NS K A+ ++ + Sbjct: 283 NGVVVKYPNSTEAKTAKSNLSKMK 306 >gi|153839872|ref|ZP_01992539.1| tetratricopeptide repeat family protein [Vibrio parahaemolyticus AQ3810] gi|149746605|gb|EDM57593.1| tetratricopeptide repeat family protein [Vibrio parahaemolyticus AQ3810] Length = 391 Score = 39.7 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 58/186 (31%), Gaps = 34/186 (18%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A ++ +A + F Q + + A + L++ + ++++A + Sbjct: 114 AKDYMVSGFLDRAEKIFEQLVEEPDYKEAALQ-QLVTIY--QQTREWEKAIHYANQLAKM 170 Query: 124 -YPESK---NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 S+ N+ + + I + T +Q+ + + Sbjct: 171 GNQRSRMRTNIAH--------FWCEIAMLDQADGNTNKAIQHFKKALSEDPKCVRAS--- 219 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + +GR YL+ +Y I VL D + + + + E Y Sbjct: 220 --------------ISLGRIYLESEDYKQTIKYLTGVLE--QDKDFVSDVLPTIAECYHH 263 Query: 240 LALMDE 245 L DE Sbjct: 264 LGQEDE 269 >gi|118575554|ref|YP_875297.1| TPR repeat protein [Cenarchaeum symbiosum A] gi|118194075|gb|ABK76993.1| TPR repeat protein [Cenarchaeum symbiosum A] Length = 369 Score = 39.7 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 29/76 (38%), Gaps = 3/76 (3%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + D +R++++K V + ++ A E F Q R + +L+ + Sbjct: 17 KKAGTDLTDSDYQRRKLHKKGVNLMADEKLDDAAEAFEQALR---YDPENVDTLIKLGYA 73 Query: 104 QYSAGKYQQAASLGEE 119 ++ Y A + + Sbjct: 74 KFHLDDYTDALKVYDR 89 >gi|91201196|emb|CAJ74256.1| hypothetical protein kuste3493 [Candidatus Kuenenia stuttgartiensis] Length = 234 Score = 39.7 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 11/92 (11%), Positives = 35/92 (38%), Gaps = 12/92 (13%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 +Y +Y + + ++ +++A + F + + F + Sbjct: 113 KYSEALYNLGIYYYEKTQYNEAIKAFKDAVKRNTRFDMGFY------NLGVAYAAIDATD 166 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 ++ + + I P+ + YY +G++Y++ Sbjct: 167 ESIAAFKRVIELNPKYPD---AYYNLGVAYSK 195 >gi|328474640|gb|EGF45445.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus 10329] Length = 391 Score = 39.7 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 57/186 (30%), Gaps = 34/186 (18%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A ++ +A + F Q + + A + L++ + +++ A + Sbjct: 114 AKDYMVSGFLDRAEKIFEQLVEEPDYKEAALQ-QLVTIY--QQTREWENAIHYANQLAKM 170 Query: 124 -YPESK---NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 S+ N+ + + I + T +Q+ + + Sbjct: 171 GNQRSRMRTNIAH--------FWCEIAMLDQADGNTNKAIQHFKKALSEDPKCVRAS--- 219 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + +GR YL+ +Y I VL D + + + + E Y Sbjct: 220 --------------ISLGRIYLESEDYKQTIKYLTGVLE--QDKDFVSDVLPTIAECYHH 263 Query: 240 LALMDE 245 L DE Sbjct: 264 LGQEDE 269 >gi|313204167|ref|YP_004042824.1| tpr domaiN-containing protein [Paludibacter propionicigenes WB4] gi|312443483|gb|ADQ79839.1| TPR domain-containing protein [Paludibacter propionicigenes WB4] Length = 1157 Score = 39.7 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 21/172 (12%), Positives = 55/172 (31%), Gaps = 14/172 (8%) Query: 105 YSA--GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y + + EE+ ++ K V Y+ Y ++ DQ Y Sbjct: 593 YKDKIEDVPMSIATFEEFCRRFGSDKRVADAYF---NIYQIQLKSGNQDQ-----ANVYR 644 Query: 163 SRIVERYTNSPYVKGARF--YVTVGRNQLAAKEVEIGRYY--LKRGEYVAAIPRFQLVLA 218 ++++ + +S Y K Y N ++ Y + +Y + Sbjct: 645 TKLITDFPDSKYQKILSQSDYAVRLENMYKEQDSIYSLTYKAFNQSDYKTVYKQVAYAKQ 704 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 N+ + + + + + R ++ + + YP+ + + ++ Sbjct: 705 NFPLSTLMPKFLFLNALSIGKSDKEENFRTALNDLLKSYPESDVSAMAKDIL 756 >gi|296126686|ref|YP_003633938.1| Tetratricopeptide TPR_2 repeat protein [Brachyspira murdochii DSM 12563] gi|296018502|gb|ADG71739.1| Tetratricopeptide TPR_2 repeat protein [Brachyspira murdochii DSM 12563] Length = 758 Score = 39.7 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 12/79 (15%) Query: 69 KEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 + + KA EYFN+ + + K+ A Y+ Y++A + I Y Sbjct: 324 SNEEYDKAIEYFNKSIEINDRY------YKAYNNLALAYYNLKNYEKAIENFNKSIDIYS 377 Query: 126 ESKNVDYVYYLVGMSYAQM 144 + + Y +G+SY + Sbjct: 378 NNAD---AYNCIGLSYYHL 393 Score = 38.9 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 67/205 (32%), Gaps = 57/205 (27%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM----- 99 DV L V +Y K + ++ + + A YF + ARK + Sbjct: 30 DVILKKVPKNYRAN-LY-KGQVCVEMKEYEDAIRYFEE----------ARKVDIKTFKSY 77 Query: 100 --SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 ++ +Y +A E + P S Y L+G+SY Sbjct: 78 NLLGISYHAIKQYDKAIECFNETLKITPNSYK---AYNLLGISYFAK--------EDYTK 126 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 ++Y ++ +E N LA +Y K +Y AI F+ Sbjct: 127 AIEYFNKSIEINP----------KYDKAYNNLA-------LFYYKNKKYNEAIEFFEH-- 167 Query: 218 ANYSDAEHAEEAMARLVEAYVALAL 242 ++ +E R+ +AY L + Sbjct: 168 -----SKSLDE---RVFKAYDMLGM 184 Score = 35.9 bits (82), Expect = 6.7, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 42/105 (40%), Gaps = 14/105 (13%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + + +++++KA EYFN+ P K+ A Y KY +A E + Sbjct: 115 GISYFAKEDYTKAIEYFNKSIEINP--KY-DKAYNNLALFYYKNKKYNEAIEFFEHSKSL 171 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + V Y ++GMSY ++ + + ++ R + Sbjct: 172 ---DERVFKAYDMLGMSYYKI--------GSYEKAIECFKRFFQY 205 >gi|225619724|ref|YP_002720981.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] gi|225214543|gb|ACN83277.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] Length = 424 Score = 39.7 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 44/121 (36%), Gaps = 14/121 (11%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGV 92 +G + D + + +Y Y +AV ++A + ++ + + Sbjct: 286 LGLYEDAIEDFNIAINIEPKYIDAYYNRAVAKNNMGLHNEAIKDYDIVIELDSNH----- 340 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV----DYVYYLVGMSYAQMIRDV 148 + A Y+ Y++A ++ I P+S + Y +G+ Y + ++D Sbjct: 341 -INAYYNRALSYYNLSDYEEAIKNYDKVIELNPKSAEAYNNRGFAKYSIGL-YEEALKDY 398 Query: 149 P 149 Sbjct: 399 D 399 Score = 35.5 bits (81), Expect = 8.6, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 36/84 (42%), Gaps = 3/84 (3%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G ++ +D + D + Y +A+ + ++ +A + +++ P + A Sbjct: 320 MGLHNEAIKDYDIVIELDSNHINAYYNRALSYYNLSDYEEAIKNYDKVIELNPKSAEAYN 379 Query: 96 SLLMSAFVQYSAGKYQQAASLGEE 119 F +YS G Y++A ++ Sbjct: 380 ---NRGFAKYSIGLYEEALKDYDK 400 >gi|108760794|ref|YP_632793.1| TPR domain-containing protein [Myxococcus xanthus DK 1622] gi|108464674|gb|ABF89859.1| TPR domain protein [Myxococcus xanthus DK 1622] Length = 498 Score = 39.7 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 20/157 (12%), Positives = 45/157 (28%), Gaps = 24/157 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 ++ S D + +++ + L +A + + + P K+ Sbjct: 1 MTTRAKGRGETSPADDEFLQQL-SRGGELLAAGRVHEAQPFLERAHQLHP---RMEKAQN 56 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV---GMSYAQMIRDVPYDQRAT 155 + + G Y +AA L E + P L G+ Y + A Sbjct: 57 LLGLCYFKLGLYDRAAELYEMLVRDNPVDPT------LRVNLGLVYLKT--------SAL 102 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 + + + A+ Y+ + Q+ Sbjct: 103 QRAAREFETATDLAPEHQ---KAQNYLGLTLAQMGEY 136 >gi|87311607|ref|ZP_01093725.1| serine/threonine protein kinase related protein-putative PQQ-dependent oxidoreductase-like protein [Blastopirellula marina DSM 3645] gi|87285729|gb|EAQ77645.1| serine/threonine protein kinase related protein-putative PQQ-dependent oxidoreductase-like protein [Blastopirellula marina DSM 3645] Length = 1113 Score = 39.7 bits (92), Expect = 0.40, Method: Composition-based stats. Identities = 9/45 (20%), Positives = 19/45 (42%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A Y KY QA S +++++ +P G++ ++ Sbjct: 190 LAETDYEGRKYAQAVSKYDKFLSSFPTHSQAPTARVRRGLANLRL 234 >gi|296127341|ref|YP_003634593.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] gi|296019157|gb|ADG72394.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] Length = 750 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 90/270 (33%), Gaps = 61/270 (22%) Query: 14 AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQN 72 A YK AL I + ++ + + S + Y ++ D + E+ Y +A ++ Sbjct: 433 QEAINYYKRALEINPNYSLSYYNIALAEMSLEDYDKALEDFNHALELGYNEADIYTNIGL 492 Query: 73 -------FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 + KA EY+N+ P + AF + KY++A + ++ I YP Sbjct: 493 IYSREAIYDKAIEYYNKVLEINPN---KVNAYYNIAFCLSNMDKYKEALEIYDKVIRMYP 549 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + + VYY G + ++ + + ++ I+ NS + Sbjct: 550 GNFD---VYYERGYTKYRVSK--------YEEAIRDFDIIINV--NSKHYNA-------- 588 Query: 186 RNQLAAKEVEIGRYYLK------RGEYVAAIPRFQLVLANYSDAE--HAEEAMARLVEAY 237 YY + Y AI F + + ++E+A Y Sbjct: 589 -------------YYYRGCSKKYLKNYDEAIKDFDKAIEYNPNNPDYYSEKA-----SCY 630 Query: 238 VALALMDEA-REVVSLIQERYPQGYWARYV 266 L E+ I+ W Y+ Sbjct: 631 DYLNKYRESIENYDKAIELN--DNDWFLYI 658 >gi|198452029|ref|XP_002137412.1| GA26563 [Drosophila pseudoobscura pseudoobscura] gi|198131756|gb|EDY67970.1| GA26563 [Drosophila pseudoobscura pseudoobscura] Length = 522 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 40/151 (26%), Gaps = 35/151 (23%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSA 101 + + D + + LK + F+KA + + + +P + A +SL Sbjct: 38 EEGGPKNDQDFAAAEQYKNQGNDLLKTKEFTKAIDMYTKAIDLYPNSAVYYANRSL---- 93 Query: 102 FVQ-------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 Y+ A Y+ YY ++ + Sbjct: 94 -AHLRQESFGYALQDGVSAVKADPGYLK----------GYYRRAAAHMSL--------GK 134 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 K L + + N A+ T Sbjct: 135 FKQALCDFEFVAKCRPNDK---DAKLKFTEC 162 >gi|194859312|ref|XP_001969353.1| GG10059 [Drosophila erecta] gi|190661220|gb|EDV58412.1| GG10059 [Drosophila erecta] Length = 439 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 52/164 (31%), Gaps = 25/164 (15%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFP----F 89 LV + D + + +VY EK + K++N++ A + + +C P Sbjct: 231 LVDCGKGLEEWKLSDE--ERLAEAKVYKEKGTNYFKKENWALAIKMYTKCKNLLPSTADT 288 Query: 90 AGVARKSLL----MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +K + A + + +A + +N Y G + Sbjct: 289 NEEVKKVKVATHSNIALCHQKSNDHFEAKQECNAVLAL---DENNVKALYRRGQCNLTI- 344 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + L+ ++++ + A V + + +L Sbjct: 345 -------NELEDALEDFQKVIQLEPGNK---AAANQVIICKQKL 378 >gi|94971634|ref|YP_593682.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94553684|gb|ABF43608.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 1404 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 38/121 (31%), Gaps = 22/121 (18%) Query: 55 RYQREVYEKAVLFLKEQNFSKAY----EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + EK + +A + +D R + + A+ Y+ G+Y Sbjct: 589 DEPHVLVEKERYLFHSGKYQEAAVAGQRALEKLPKD-------RNASVYLAYTYYNLGRY 641 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +L ++Y P+ N + V + T +Q +R +ER Sbjct: 642 DDVLALSDKYDNIIPKEPNFP-----------LLEGHVHRQSQLTDEAVQDYTRALERDP 690 Query: 171 N 171 Sbjct: 691 K 691 Score = 35.5 bits (81), Expect = 9.3, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 41/122 (33%), Gaps = 21/122 (17%) Query: 156 KLMLQYMSRIVERYTNSPYVKG--ARFYV-----TVGRNQLAA---------KEVEIG-R 198 + + + ++ S K A+ Y+ + LA ++ + Sbjct: 120 QESINAYNHAIQTDPKSLDAKSGLAQTYMKMGRTDEAKRLLAQVLAAGSTRQNDLLVAGE 179 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 YL+ +Y I Q +A A + Y+ + +A++++ + + R P Sbjct: 180 LYLRTKDYQQGINYLQRADNLKPNA----HAELLMAMGYMKMKQPQKAKQLLDMAKRRAP 235 Query: 259 QG 260 Sbjct: 236 NN 237 >gi|15594660|ref|NP_212449.1| hypothetical protein BB0315 [Borrelia burgdorferi B31] gi|195941331|ref|ZP_03086713.1| hypothetical protein Bbur8_00415 [Borrelia burgdorferi 80a] gi|218249786|ref|YP_002374837.1| hypothetical protein BbuZS7_0320 [Borrelia burgdorferi ZS7] gi|221217696|ref|ZP_03589164.1| conserved hypothetical protein [Borrelia burgdorferi 72a] gi|224533207|ref|ZP_03673807.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23] gi|224533773|ref|ZP_03674361.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a] gi|225550163|ref|ZP_03771123.1| conserved hypothetical protein [Borrelia burgdorferi 118a] gi|226320616|ref|ZP_03796176.1| conserved hypothetical protein [Borrelia burgdorferi 29805] gi|226321632|ref|ZP_03797158.1| conserved hypothetical protein [Borrelia burgdorferi Bol26] gi|2688223|gb|AAC66704.1| predicted coding region BB0315 [Borrelia burgdorferi B31] gi|218164974|gb|ACK75035.1| conserved hypothetical protein [Borrelia burgdorferi ZS7] gi|221192373|gb|EEE18592.1| conserved hypothetical protein [Borrelia burgdorferi 72a] gi|224511934|gb|EEF82335.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23] gi|224513066|gb|EEF83429.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a] gi|225369275|gb|EEG98728.1| conserved hypothetical protein [Borrelia burgdorferi 118a] gi|226232821|gb|EEH31574.1| conserved hypothetical protein [Borrelia burgdorferi Bol26] gi|226234035|gb|EEH32756.1| conserved hypothetical protein [Borrelia burgdorferi 29805] gi|312148142|gb|ADQ30801.1| conserved hypothetical protein [Borrelia burgdorferi JD1] gi|312149570|gb|ADQ29641.1| conserved hypothetical protein [Borrelia burgdorferi N40] Length = 228 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 19/180 (10%), Positives = 57/180 (31%), Gaps = 44/180 (24%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 +TI + ++ + L+ + ++Y+K++L + ++KA E + Sbjct: 4 ITIMILFYGLIINVCPTTTTSILKLNKKANKHTIEKLYQKSMLLKDSKKYNKAIESLTKI 63 Query: 84 SRDFPFAGVARKSLLMSAFVQ-------YSAGKYQQAASLGEEYIT----------QYPE 126 A Y +++A ++Y+ Sbjct: 64 INM----------DQNQADAHLLLSELEYLNKNWKKAIIKSQDYLKIIDFKDKKNFL--- 110 Query: 127 SKNVDYVYYLVG---------MSYAQMIRDVPYDQRATKLMLQY-MSRIVERYTNSPYVK 176 ++ + Y+L+G + + Q +++ + + + + +TN+ Sbjct: 111 --DISWAYFLIGEVKNSMDYIIKFFQSGKELFR--ENIFIAIDALFKKSIYHFTNNENAA 166 >gi|253681865|ref|ZP_04862662.1| TPR domain protein [Clostridium botulinum D str. 1873] gi|253561577|gb|EES91029.1| TPR domain protein [Clostridium botulinum D str. 1873] Length = 461 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 7/77 (9%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +K L ++ + +A Y+ + P A+ L AF + +Y++A E I Sbjct: 76 KKGNNALDKKQYRRAILYYKKILLIEPKLTFAKN-KLGLAFFYHK--QYEEAVIQFRELI 132 Query: 122 TQYPESK----NVDYVY 134 P + N+ YVY Sbjct: 133 QLNPHNSIFYNNLAYVY 149 >gi|225012030|ref|ZP_03702467.1| Tetratricopeptide TPR_2 repeat protein [Flavobacteria bacterium MS024-2A] gi|225003585|gb|EEG41558.1| Tetratricopeptide TPR_2 repeat protein [Flavobacteria bacterium MS024-2A] Length = 265 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 9/76 (11%), Positives = 24/76 (31%), Gaps = 5/76 (6%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 E++E+ + +F+KA + + Y ++ Sbjct: 34 SSEELFEQGNAAYNDGDFTKAISLYVQTLD----MGSHSAALYFNMGNAYYRLNNVAESI 89 Query: 115 SLGEEYITQYPESKNV 130 E+ P++K++ Sbjct: 90 YYFEKAKQLDPDNKDI 105 >gi|218441625|ref|YP_002379954.1| serine/threonine protein kinase with TPR repeats [Cyanothece sp. PCC 7424] gi|218174353|gb|ACK73086.1| serine/threonine protein kinase with TPR repeats [Cyanothece sp. PCC 7424] Length = 730 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 41/113 (36%), Gaps = 16/113 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y+K +N+ +A + + + + P F+ ++ + KY QA + Sbjct: 501 YQKGFALQNLKNYEEAIKSYEKAVKINPSFS----QAWYQKGNSYMNLEKYSQAGESYRQ 556 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + P ++ +Y G++ ++ R + L+ + NS Sbjct: 557 AVQFQP---DLYQAWYSQGIALNRLNR--------YREALKAFEEGTQIQPNS 598 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 27/210 (12%), Positives = 60/210 (28%), Gaps = 36/210 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E+A + K S+A + + P ++ +Q Y A + + Sbjct: 434 ERAEVLEKLGKNSEAIYSYEKVIDFTP-NEW--QAWQNLGEIQVKLQDYATALVSLNKSL 490 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P+ + + +Y G + + + + ++ + V+ + Sbjct: 491 QINPDDE---WSWYQKGFALQNL--------KNYEEAIKSYEKAVKINPSFSQAW----- 534 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 + G Y+ +Y A ++ + D +A A L Sbjct: 535 ------------YQKGNSYMNLEKYSQAGESYRQAVQFQPD---LYQAWYSQGIALNRLN 579 Query: 242 LMDEAREVVSLIQERYPQG--YWARYVETL 269 EA + + P W + TL Sbjct: 580 RYREALKAFEEGTQIQPNSFEAWYQKAWTL 609 >gi|160889567|ref|ZP_02070570.1| hypothetical protein BACUNI_01991 [Bacteroides uniformis ATCC 8492] gi|270296691|ref|ZP_06202890.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317480059|ref|ZP_07939171.1| tetratricopeptide [Bacteroides sp. 4_1_36] gi|156861084|gb|EDO54515.1| hypothetical protein BACUNI_01991 [Bacteroides uniformis ATCC 8492] gi|270272678|gb|EFA18541.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316903801|gb|EFV25643.1| tetratricopeptide [Bacteroides sp. 4_1_36] Length = 281 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 14/123 (11%), Positives = 36/123 (29%), Gaps = 12/123 (9%) Query: 16 AYQLYKFALTIFFSIAV----CFLVGWERQSSRDVYLDSVTDVRYQREVYE----KAVLF 67 ++ F L++ +I V + +S + S + R+ + Sbjct: 3 MNKILFFTLSLVMAITAYGQNSASVDTLQTASDSTSVGSHAEFSAARQESNVTKAEGDSA 62 Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 +++ A + + + A Y A +A E + P + Sbjct: 63 YIRNDYASAIQIYENLLKK---GEAAE-VYYNLGNSYYKADDIARAILNYERALLLEPGN 118 Query: 128 KNV 130 ++ Sbjct: 119 ADI 121 >gi|154250089|ref|YP_001410914.1| TPR repeat-containing protein [Fervidobacterium nodosum Rt17-B1] gi|154154025|gb|ABS61257.1| TPR repeat-containing protein [Fervidobacterium nodosum Rt17-B1] Length = 533 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 75/226 (33%), Gaps = 57/226 (25%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 YEK + L E+N+++A E + + + +LL + G Y+ A Sbjct: 70 YYEKFKVLLNEKNYAEAEEILKKVKELHYDYRYHFY--NALLQA-----KMGNYEFAEIE 122 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 ++ +T P + YY +G + +E Y Y K Sbjct: 123 FKQALTLNP---DFALAYYELGNVLF---------------AEKDYEDAIEAYRK-AYEK 163 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGE-------YVAAIPRFQLVLANYSDAEHAEEA 229 F + + + IG Y++ G+ Y + I R + L Y +E Sbjct: 164 DPNFLLPLLK---------IGDTYMELGQLDDAEMFYKSIIARDK--LHQY----ATKEG 208 Query: 230 MAR--LVEAYVALA----LMDEAREVVSLIQERYPQGYWARYVETL 269 + + EAY+ L L + + + + G A L Sbjct: 209 LEIEPMPEAYLRLGVLYNLRQQYEKAEEIFKLGLSTGKKAEITYNL 254 >gi|78223239|ref|YP_384986.1| TPR repeat-containing protein [Geobacter metallireducens GS-15] gi|78194494|gb|ABB32261.1| TPR repeat protein [Geobacter metallireducens GS-15] Length = 883 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 37/112 (33%), Gaps = 22/112 (19%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + AL + G + + E+Y +AV L + N + A Sbjct: 4 RRIALICLIVATLSACGG-----------------KTKEELYAEAVKELDKGNANGAIVL 46 Query: 80 FN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 +D + + A + GK++QA ++ + Q P + + Sbjct: 47 LKNAVEKDQNYFD----ARYKLAKAYMTVGKFEQAEKEFQKALRQNPSNPEI 94 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 20/67 (29%), Gaps = 8/67 (11%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 K + +N+ +A +++ P A Y + A S + Sbjct: 268 KGIALYTRKNYDQAITELQGVVKNYQNPGAYY------YLGLSYYQRNDLESALSQFRKV 321 Query: 121 ITQYPES 127 I P+ Sbjct: 322 IDLNPKH 328 >gi|119384212|ref|YP_915268.1| methyltransferase type 12 [Paracoccus denitrificans PD1222] gi|119373979|gb|ABL69572.1| Methyltransferase type 12 [Paracoccus denitrificans PD1222] Length = 417 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 3/78 (3%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T Y +Y AV + +FS A + + + + ++ A + Sbjct: 103 TRPGYAEAMYNLAVTSMDLADFSTAADLLAEVTAV---SPADARAHFSLADALIALNDLD 159 Query: 112 QAASLGEEYITQYPESKN 129 AA Y+ P ++ Sbjct: 160 AAALSLHRYLRLAPGDEH 177 >gi|332884789|gb|EGK05045.1| hypothetical protein HMPREF9456_03198 [Dysgonomonas mossii DSM 22836] Length = 354 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 18/156 (11%), Positives = 54/156 (34%), Gaps = 39/156 (25%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRD------FPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +AV + ++ + +P+ A+ Y++A S+ Sbjct: 32 EAVKLMDCGKVEESITLLKEAQELDPANIVYPY---------EIAYAHCLEENYEEAISI 82 Query: 117 GEEYITQYP--ESKNVDYVYY-LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + P ++++ ++ ++G+ Y + + ++ + ++++ +S Sbjct: 83 LK------PIQDNEDASDTFFQMLGICYNSI--------GNNEGAIKTFEKGIKKFPDS- 127 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 Y + +A E Y ++G +AA Sbjct: 128 ----GALYFELANAYMAQDEKYTALSYFEKG--IAA 157 >gi|302912770|ref|XP_003050773.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256731711|gb|EEU45060.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 613 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 46/141 (32%), Gaps = 20/141 (14%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDF 87 ++ +G ++ + D Y +A + + + A + + + +DF Sbjct: 368 SISLELGEPDKAEAEFAKALEQDNNDPDVYYHRAQAHFIKGDLADAQKDYQKSIDLDKDF 427 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 F+ + QY G + + I +P+ +V Y YY + Sbjct: 428 IFSH------IQLGVTQYKMGSIASSMATFRRCIKNFPKVPDV-YNYY----------GE 470 Query: 148 VPYDQRATKLMLQYMSRIVER 168 + DQ ++ +E Sbjct: 471 LLLDQGNFSEAVEKFDTAMEM 491 >gi|225552004|ref|ZP_03772944.1| conserved hypothetical protein [Borrelia sp. SV1] gi|225371002|gb|EEH00432.1| conserved hypothetical protein [Borrelia sp. SV1] Length = 227 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 47/132 (35%), Gaps = 25/132 (18%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K + +F+ + + ++ + LD + ++Y+K++L + ++KA E Sbjct: 1 MKKIIIILFYGL---IINICPTTTTSILKLDEKANKYTIEKLYQKSMLLKDSKKYNKAIE 57 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQ-------YSAGKYQQAASLGEEYITQ-----YPE 126 + A Y +++A ++Y+ Sbjct: 58 SLTKIINM----------DKNQADAHLLLSELEYLNKNWKKAIIKSQDYLKIIDFKDKKN 107 Query: 127 SKNVDYVYYLVG 138 ++ + Y+L+G Sbjct: 108 FLDISWAYFLIG 119 >gi|195145512|ref|XP_002013736.1| GL24300 [Drosophila persimilis] gi|194102679|gb|EDW24722.1| GL24300 [Drosophila persimilis] Length = 522 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 40/151 (26%), Gaps = 35/151 (23%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSA 101 + + D + + LK + F+KA + + + +P + A +SL Sbjct: 38 EEGGPKNDQDFAAAEQYKNQGNDLLKTKEFTKAIDMYTKAIDLYPNSAVYYANRSL---- 93 Query: 102 FVQ-------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 Y+ A Y+ YY ++ + Sbjct: 94 -AHLRQESFGYALQDGVSAVKADPGYLK----------GYYRRAAAHMSL--------GK 134 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 K L + + N A+ T Sbjct: 135 FKQALCDFEFVAKCRPNDK---DAKLKFTEC 162 >gi|186510403|ref|NP_001118695.1| ROF1 (ROTAMASE FKBP 1); FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gi|332643476|gb|AEE76997.1| rotamase FKBP 1 [Arabidopsis thaliana] Length = 562 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 52/151 (34%), Gaps = 26/151 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ----CSRDFPFA-GVARKSL-------LMSAFVQYSAGK 109 E+ K +S A + + + D F+ +++ L A + Sbjct: 405 EEGNSKFKGGKYSLASKRYEKAVKFIEYDTSFSEEEKKQAKALKVACNLNDAACKLKLKD 464 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+QA L + + ES NV Y +Y ++ D+ + K L E Sbjct: 465 YKQAEKLCTKVLEL--ESTNVK-ALYRRAQAYMELS-DLDLAEFDVKKAL-------EID 513 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 N+ VK + + + KE ++Y Sbjct: 514 PNNREVKLEQKRLKEKMKEFNKKE---AKFY 541 >gi|305665470|ref|YP_003861757.1| tetratricopeptide repeat domain-containing protein [Maribacter sp. HTCC2170] gi|88710226|gb|EAR02458.1| tetratricopeptide repeat domain protein [Maribacter sp. HTCC2170] Length = 592 Score = 39.7 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 46/126 (36%), Gaps = 7/126 (5%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A L + +A + ++ + ++LL + S Y A ++ Sbjct: 469 YARADLLAYQNKTKEAITALDDILQNHKGEKIEDEALLKQGELLVSIKDYDAAKFNYQKI 528 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I Y D Y+ +G Y ++ + + ++ +I+ Y +S Y AR Sbjct: 529 IEFYTSDILADDAYFALGELYRNVLNEP-------EKAKEHYEKIIYNYQDSYYFPQARK 581 Query: 181 YVTVGR 186 + R Sbjct: 582 NFRLLR 587 >gi|240949273|ref|ZP_04753617.1| hypothetical protein AM305_10026 [Actinobacillus minor NM305] gi|240296389|gb|EER47033.1| hypothetical protein AM305_10026 [Actinobacillus minor NM305] Length = 397 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 74/197 (37%), Gaps = 32/197 (16%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LD D ++++ K A F+ + +A Y+ + FA + S LMS + Sbjct: 103 LDLSPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYILLLDEPEFAVNS-LSQLMSIY-- 159 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++++A ++ E+ + PE+ + +Y DQ A L + + Sbjct: 160 QKTKEWKKAINVSEKLLKIAPETDRIPLAHYY---CEYAQAVKNE-DQNAF---LSLLEK 212 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +E + A + +G Y+L+ A ++ VL D++ Sbjct: 213 ALEHFPQC-----------------ARASMMLGDYHLENQRVRTAADYYEKVL--MQDSD 253 Query: 225 HAEEAMARLVEAYVALA 241 + E + ++ Y+ L Sbjct: 254 YIGEVLDKIRTCYLTLK 270 >gi|153007329|ref|YP_001381654.1| hypothetical protein Anae109_4492 [Anaeromyxobacter sp. Fw109-5] gi|152030902|gb|ABS28670.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. Fw109-5] Length = 279 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 41/150 (27%), Gaps = 44/150 (29%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKS------------------------------ 96 +L+ +++ A Y+ + +P AR++ Sbjct: 78 YLELGDYTGAISYYRRIVALYPGGKEAREARVQIGDIYRERFRDPLAAIAQYADVAASDA 137 Query: 97 ------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 L A G + QA + ++P+ D L +++ RD Sbjct: 138 PEAPRYQLEVARAYLELGNWSQARTEARILREKWPDHALADEAQLLAAQAWSLEKRDDS- 196 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARF 180 L +++R V A Sbjct: 197 -------ALSAFQALIDRRPRPELVARALE 219 Score = 39.3 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 17/103 (16%) Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-GEYVAAIPRFQLV 216 + Y RIV Y + AR V+IG Y +R + +AAI ++ V Sbjct: 87 AISYYRRIVALYPGGKEAREAR--------------VQIGDIYRERFRDPLAAIAQYADV 132 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 A SDA A + AY+ L +AR +++E++P Sbjct: 133 AA--SDAPEAPRYQLEVARAYLELGNWSQARTEARILREKWPD 173 Score = 38.9 bits (90), Expect = 0.74, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 47/156 (30%), Gaps = 23/156 (14%) Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 G Y A S + YP K +G Y R+ D A + Sbjct: 77 SYLELGDYTGAISYYRRIVALYPGGKEAREARVQIGDIY----RERFRDPLAAIAQYADV 132 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + A ++E+ R YL+ G + A +++ + D Sbjct: 133 AA--------SDAPEAP-----------RYQLEVARAYLELGNWSQARTEARILREKWPD 173 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 A+EA +A+ D A + +R P Sbjct: 174 HALADEAQLLAAQAWSLEKRDDSALSAFQALIDRRP 209 >gi|159896623|ref|YP_001542870.1| TPR repeat-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159889662|gb|ABX02742.1| Tetratricopeptide TPR_2 repeat protein [Herpetosiphon aurantiacus ATCC 23779] Length = 1090 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 45/116 (38%), Gaps = 18/116 (15%) Query: 57 QREVYEKAVLFLK----EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + ++++A+ + +++KA + +FP ++ + A + K Q Sbjct: 4 NQAIFDRALEQYQLASRAGDWNKALTEAARAMTEFPTH---EQARIAVATALFHTNKLPQ 60 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 A L +E + + P++ + + I + Q T ++ ++ ER Sbjct: 61 ALQLWQELLKRNPDNP-----------IFTEYIAKIYRAQGDTDQAIELFMQLAER 105 Score = 35.1 bits (80), Expect = 9.7, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 23/56 (41%), Gaps = 3/56 (5%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 A + +NF A + + + P R++ A + + G+ +A + +E Sbjct: 826 AEAYAANENFEGAIQALQRVKQLLP---YDRQAYTKLADIYFRQGRLNEALTQLDE 878 >gi|149058910|gb|EDM09917.1| similar to KIAA0372 gene product (predicted), isoform CRA_a [Rattus norvegicus] gi|149058913|gb|EDM09920.1| similar to KIAA0372 gene product (predicted), isoform CRA_a [Rattus norvegicus] gi|149058914|gb|EDM09921.1| similar to KIAA0372 gene product (predicted), isoform CRA_a [Rattus norvegicus] Length = 809 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 10/133 (7%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVR-YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 A+ L LD ++D + + + L KA + +P Sbjct: 93 ALLKLSDCASLEEAVHILDQLSDTDNTPGLLVLQGLACLNTGAIDKATKIMEDLVASYP- 151 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 ++ L A+V ++ Y QA + + + + V +Y +G++Y M + Sbjct: 152 -DLSEAHALE-AYVHFTKKDYVQAETSFQRALE---KDAEVAEYHYQLGLTYWLMGEETR 206 Query: 150 YDQRATKLMLQYM 162 D+ L + Sbjct: 207 KDRT---KALNHF 216 >gi|108758818|ref|YP_635275.1| serine/threonine kinase family protein [Myxococcus xanthus DK 1622] gi|108462698|gb|ABF87883.1| serine/threonine kinase family protein [Myxococcus xanthus DK 1622] Length = 992 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 23/82 (28%), Gaps = 10/82 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFN-QCSRD----FPFAGVARKSLLMSAFVQYSAGKYQQ---- 112 E + + +A F S P ++ L A+ + +Q Sbjct: 682 ELGATRMAQLRADEAMRLFEQALSTRRAALGPSHPDVARAQLELAYAHWRRSDVEQVEAL 741 Query: 113 AASLGEEYIT-QYPESKNVDYV 133 A E + PE +V Sbjct: 742 ARGALEVFERALGPEHPDVASA 763 >gi|147676483|ref|YP_001210698.1| hypothetical protein PTH_0148 [Pelotomaculum thermopropionicum SI] gi|146272580|dbj|BAF58329.1| hypothetical protein [Pelotomaculum thermopropionicum SI] Length = 500 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 10/84 (11%) Query: 49 DSVTDVRYQREVYEKAVLF--LKEQNF---SKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + D + RE+YEK V L + A +++ P+ ++L A Sbjct: 300 EESRDPQEVRELYEKGVQAGRLSLGDLFFKKNAGKFWLILETR-PY----MRALAGLADS 354 Query: 104 QYSAGKYQQAASLGEEYITQYPES 127 + G+ QQA +E + P Sbjct: 355 LWKTGQRQQAIGHYKEMLRLNPND 378 >gi|116749723|ref|YP_846410.1| hypothetical protein Sfum_2293 [Syntrophobacter fumaroxidans MPOB] gi|116698787|gb|ABK17975.1| hypothetical protein Sfum_2293 [Syntrophobacter fumaroxidans MPOB] Length = 212 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 20/34 (58%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 L+Y ++ RY +SP+ A+F+V + R +A Sbjct: 98 EALKYFRELIARYPDSPWASQAKFWVELLRKTVA 131 >gi|330965913|gb|EGH66173.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas syringae pv. actinidiae str. M302091] Length = 252 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 9/63 (14%) Query: 64 AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + LK N +A E F + R P +SLL A + Y +Y A + + Sbjct: 148 GMTSLKLGNREQAREQFTKALRLDRQQP------RSLLEMAQLYYEDRQYVPARDYYDRF 201 Query: 121 ITQ 123 Sbjct: 202 SQL 204 >gi|298527727|ref|ZP_07015131.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira thiodismutans ASO3-1] gi|298511379|gb|EFI35281.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira thiodismutans ASO3-1] Length = 794 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 41/127 (32%), Gaps = 19/127 (14%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV----QYSAGKYQQAASLGEE 119 ++++E F A + Q R + +F G A ++ E Sbjct: 273 GAMYMEESRFQDAVQVLEQ-GRAYLGGDY------DLSFALAETYLDMGDVPAARAMLHE 325 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I + PE L + + + + YDQ + ++ R + + + + Sbjct: 326 EIKRDPEH--------LRALDAGKYLAGIYYDQGDLDKAAHQLDMVLRRNPDDVHARTMQ 377 Query: 180 FYVTVGR 186 + + R Sbjct: 378 GRIFLAR 384 >gi|153838050|ref|ZP_01990717.1| Tol system periplasmic component YbgF [Vibrio parahaemolyticus AQ3810] gi|149748584|gb|EDM59443.1| Tol system periplasmic component YbgF [Vibrio parahaemolyticus AQ3810] Length = 251 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + + Y S Y A +G+ Y Sbjct: 137 YQNAVDLILKKRDYTGAIAAFQQFQKDYPGSTYS--------------ANSHYWLGQLYF 182 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A+ F V+ +Y D+ +A+ +L E +A++ + + YP Sbjct: 183 AKKQDKDAVKSFAAVV-SYKDSNKRADALLKLGEIAERNNNAAQAKKYYQQVVDEYPGSA 241 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 242 SAKLAGSKLK 251 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 49/138 (35%), Gaps = 16/138 (11%) Query: 50 SVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY--- 105 T ++ Y+ AV LK+++++ A F Q +D+P + + S + + Sbjct: 126 KYTPNVDEQTAYQNAVDLILKKRDYTGAIAAFQQFQKDYPGSTYSANSHYWLGQLYFAKK 185 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 ++ + Y +K D + ++ + A +Y ++ Sbjct: 186 QDKDAVKSFAAVVSYKD---SNKRAD--------ALLKLGEIAERNNNAA-QAKKYYQQV 233 Query: 166 VERYTNSPYVKGARFYVT 183 V+ Y S K A + Sbjct: 234 VDEYPGSASAKLAGSKLK 251 >gi|153006594|ref|YP_001380919.1| hypothetical protein Anae109_3756 [Anaeromyxobacter sp. Fw109-5] gi|152030167|gb|ABS27935.1| Tetratricopeptide TPR_4 [Anaeromyxobacter sp. Fw109-5] Length = 516 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 36/85 (42%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + ++ AV + K +A E + ++ + VA ++L+ A + Sbjct: 339 EKLAADPRGGDAANALHNAAVAWDKAGKADRAAEIRERILKEHADSKVAGNNMLLLAVNK 398 Query: 105 YSAGKYQQAASLGEEYITQYPESKN 129 + AA L +++I +YP+S N Sbjct: 399 SKKNDHSGAAKLYDDFIARYPDSPN 423 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 10/145 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + A L E ++A + F + + D P G A +L +A AGK +AA + E Sbjct: 319 FAAAQKLLDEGKPAEAAQAFEKLAAD-PRGGDAANALHNAAVAWDKAGKADRAAEIRERI 377 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + ++ +SK L+ ++ ++ + + RY +SP A Sbjct: 378 LKEHADSKVAGNNMLLLAVNKSKKNDHSG--------AAKLYDDFIARYPDSPNRCVALQ 429 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGE 205 V + LA K Y+ G+ Sbjct: 430 NVASELD-LAKKAAPAAERYVTFGK 453 >gi|114570964|ref|YP_757644.1| hypothetical protein Mmar10_2414 [Maricaulis maris MCS10] gi|114341426|gb|ABI66706.1| conserved hypothetical protein [Maricaulis maris MCS10] Length = 291 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 29/78 (37%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 D+ + Y F +F++A + F R P A +L+ A + G Sbjct: 195 DNPDHALTAQAQYWLGETFYVRSDFTQAADAFIASLRLQPSGEKAPDALVRLAASLHGMG 254 Query: 109 KYQQAASLGEEYITQYPE 126 + + A S + Q+P Sbjct: 255 RTEDACSTLARFGRQFPN 272 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 8/86 (9%), Positives = 20/86 (23%), Gaps = 8/86 (9%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 +A + + A + E +I P+ Y +G ++ Sbjct: 171 EAARARLVDSDFIGAQAGFEGFIADNPDHALTAQAQYWLGETFYVRSD--------FTQA 222 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTV 184 + + A + Sbjct: 223 ADAFIASLRLQPSGEKAPDALVRLAA 248 >gi|51473429|ref|YP_067186.1| hypothetical protein RT0222 [Rickettsia typhi str. Wilmington] gi|51459741|gb|AAU03704.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington] Length = 242 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 25/67 (37%), Gaps = 5/67 (7%) Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + F+ P+ +++ A Y K +A + +I +YP S + Y+ Sbjct: 103 KNFDVNKDIAPY----KQA-YDLALAAYKDNKLTEAKDKFKNFIQKYPNSPLISNAYFWY 157 Query: 138 GMSYAQM 144 + + Sbjct: 158 AECFFKQ 164 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 3/90 (3%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 ++ D D+ ++ Y+ A+ K+ ++A + F + +P + + + Sbjct: 97 HDNTPKKNFDVNKDIAPYKQAYDLALAAYKDNKLTEAKDKFKNFIQKYPNSPLISNAYFW 156 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKN 129 A + Y AA Y+ Y ES Sbjct: 157 YAECFFKQKDYNGAAIN---YLKCYQESPK 183 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 22/106 (20%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY-VAAIPRFQL 215 +++Y NSP + A F+ + K+ +Y AAI Sbjct: 132 EAKDKFKNFIQKYPNSPLISNAYFWYAEC--------------FFKQKDYNGAAINY--- 174 Query: 216 VLANYSDAE---HAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 L Y ++ + + + +L + L M EA V+ + + +P Sbjct: 175 -LKCYQESPKGAKSSDGLLKLALSLGELKKMQEACNVLVTLDKEFP 219 >gi|28868639|ref|NP_791258.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv. tomato str. DC3000] gi|213971520|ref|ZP_03399631.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv. tomato T1] gi|301386125|ref|ZP_07234543.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv. tomato Max13] gi|302060175|ref|ZP_07251716.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv. tomato K40] gi|302135118|ref|ZP_07261108.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851877|gb|AAO54953.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv. tomato str. DC3000] gi|213923712|gb|EEB57296.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv. tomato T1] gi|331019382|gb|EGH99438.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 252 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 9/63 (14%) Query: 64 AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + LK N +A E F + R P +SLL A + Y +Y A + + Sbjct: 148 GMTSLKLGNREQAREQFTKALRLDRQQP------RSLLEMAQLYYEDRQYVPARDYYDRF 201 Query: 121 ITQ 123 Sbjct: 202 SQL 204 >gi|54309709|ref|YP_130729.1| hypothetical protein PBPRA2548 [Photobacterium profundum SS9] gi|46914147|emb|CAG20927.1| conserved hypothetical protein [Photobacterium profundum SS9] Length = 249 Score = 39.7 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 10/140 (7%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 + + ++ + + E YEKAV LK+++++ A FN +P + + Sbjct: 111 SADKPGSGETYSGDISENEAYEKAVNLILKKKDYAGAVTAFNAFLTTYPESTYKANAHYW 170 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + ++ K +A+ + + +K D +G+ A+ +DV +L Sbjct: 171 LGQLYFTQNKLAEASKEFKAVTSDEKSNKRSD-ALLKLGVI-AERSKDV-------ELAK 221 Query: 160 QYMSRIVERYTNSPYVKGAR 179 +Y ++ Y +S + A Sbjct: 222 KYYQEVISTYPSSTSSRQAE 241 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 23/124 (18%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A + ++T YPES +Y +G Y + + Sbjct: 140 KKKDYAGAVTAFNAFLTTYPESTYKANAHYWLGQLYFTQNK--------LAEASKEFKA- 190 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V S A + V + +K+VE+ + Y Q V++ Y + Sbjct: 191 VTSDEKSNKRSDALLKLGVIAER--SKDVELAKKYY------------QEVISTYPSSTS 236 Query: 226 AEEA 229 + +A Sbjct: 237 SRQA 240 >gi|218245633|ref|YP_002371004.1| CheR-type MCP methyltransferase with Tpr repeats [Cyanothece sp. PCC 8801] gi|218166111|gb|ACK64848.1| MCP methyltransferase, CheR-type with Tpr repeats [Cyanothece sp. PCC 8801] Length = 527 Score = 39.7 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 10/74 (13%), Positives = 33/74 (44%), Gaps = 3/74 (4%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 ++ + + + ++ E+ ++++N+S + + ++ +P + A L+ Sbjct: 351 TTTKENISQAIEEVNEIDLLEEVKQLIEQKNYSFSIKKLHKILEKYPNS-FAANYLMAEI 409 Query: 102 FVQYSAGKYQQAAS 115 + GKY++A Sbjct: 410 YAN--LGKYEEAID 421 >gi|159906151|ref|YP_001549813.1| hypothetical protein MmarC6_1770 [Methanococcus maripaludis C6] gi|159887644|gb|ABX02581.1| Tetratricopeptide TPR_2 repeat protein [Methanococcus maripaludis C6] Length = 393 Score = 39.7 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 68/208 (32%), Gaps = 42/208 (20%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S+ + + +++ EK + + + KA E+FN+ P + K Sbjct: 5 SIFETKEPKKMLEKGIGYYNNGKYQKAVEFFNKTISSEPKNP---DAWYFKGNAYQKLDK 61 Query: 110 YQQAASLGEEYITQYPESKNV--DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 + A E+ ++ P + +Y L L+ + +E Sbjct: 62 PKLAQDSYEKALSIRPNDPELVKNYAMLL--------------------NSLELFNESIE 101 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 + Y + +T + I YLK G + A+ F +L + Sbjct: 102 VL-KNVYEPDSE--ITEI--------LGIA--YLKTGRFEEALVEFDKILEKKPKYKQV- 147 Query: 228 EAMARLVEAYVALALMDEA-REVVSLIQ 254 +A+ A V L DEA +++ Sbjct: 148 --LAKKGTALVGLKKFDEALDTYEKVLK 173 >gi|197102768|ref|NP_001127468.1| serine/threonine-protein phosphatase 5 [Pongo abelii] gi|55730209|emb|CAH91828.1| hypothetical protein [Pongo abelii] Length = 499 Score = 39.7 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 50/154 (32%), Gaps = 30/154 (19%) Query: 32 VCFLVGWERQSSRDVYLDSVTD--VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 + G + + + D ++ E+ +A + K +++ A ++++Q P Sbjct: 1 MAMAEGERTECAEPRRDEPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS 60 Query: 90 AG--VARKSLLMSAF----VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +S A+ Y+ G +A L ++YI YY S Sbjct: 61 NAIYYGNRS---LAYLRTECYGYALGDATRAIELDKKYIK----------GYYRRAASNM 107 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + + L+ +V+ + K Sbjct: 108 AL--------GKFRAALRDYETVVKVKPHDKDAK 133 >gi|331007793|ref|ZP_08330907.1| TPR repeat containing exported protein [gamma proteobacterium IMCC1989] gi|330418402|gb|EGG92954.1| TPR repeat containing exported protein [gamma proteobacterium IMCC1989] Length = 266 Score = 39.7 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 1/93 (1%) Query: 53 DVRYQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + + +Y + + L +Q++S A F + F + + ++ G+ + Sbjct: 142 NSQAANALYSEGISLLLDKQDYSGAKAVFAEYLDRFKGGQYTPNVYYWTGQILFANGEKK 201 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 AA E I++Y V + + Y + Sbjct: 202 AAADNFELLISEYGTHSKVPDAQFKLARIYFEQ 234 >gi|307191462|gb|EFN75003.1| Tetratricopeptide repeat protein 21B [Camponotus floridanus] Length = 1308 Score = 39.7 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 75/249 (30%), Gaps = 37/249 (14%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 L + ++++ L G + S D T Y KA F++A Sbjct: 579 LENCIKSCQMAMSLAKLSGGSNKKSDMSASDRATLYLELIAAYSKAR------RFAEALA 632 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + + + + +A + G+ + A + YP YYL Sbjct: 633 LVEEAKLNLAGTAELERVTISTADIYLDMGELENAVDCLQ---NIYPGQP-----YYLQA 684 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-YVKGARFYV--TVGRNQLAAKE-- 193 + I R + +VE S Y Y+ + A E Sbjct: 685 HTKLAEINLNYRKDRQAFA--KCFRELVEHCPGSKTYSMLGNAYMSIQEPERAIEAYEQA 742 Query: 194 --------VEIG----RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 V+I + +K +Y AI ++ ++ + + L + Y+ + Sbjct: 743 LSQNPVDKVDIANKMGKALVKAHQYAKAINYYKDIVKQDNCTTLKLD----LAKLYMKMK 798 Query: 242 LMDEAREVV 250 D+A + Sbjct: 799 QYDKAEATL 807 >gi|220910314|ref|YP_002485625.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 7425] gi|219866925|gb|ACL47264.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425] Length = 155 Score = 39.7 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 43/110 (39%), Gaps = 18/110 (16%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ L++ + +A E + + P FA R+++L Y+ G Y++A + E+ Sbjct: 46 RSQDLLEQGDVEEAKEILTELVEEQPDFAEAWNRRAVL-----YYTQGDYRRAIADCEQV 100 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 I P + +G+ +A + V + R +E Sbjct: 101 IRLVPYHFG---ALHGLGLCHAAVGEYV--------AAIAAFRRALELQP 139 >gi|147919338|ref|YP_686926.1| hypothetical protein RCIX2537 [uncultured methanogenic archaeon RC-I] gi|110622322|emb|CAJ37600.1| hypothetical protein RCIX2537 [uncultured methanogenic archaeon RC-I] Length = 310 Score = 39.7 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 61/174 (35%), Gaps = 16/174 (9%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + D TD + +E + F N+ +A E F + S P A + + Sbjct: 11 EEEKFDLSTDQEIDQH-FEAGMDFRDMGNYGRAVEEFRKMSELEPDDAEAHR---LLGEA 66 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 Y G Y++A ++ I + DY Y + YA+M R+ Q Sbjct: 67 LYRNGAYEEALKEFDKAIQL-----DEDYTEARYWKSIVYAKMGREKESSQEYRTAYDSD 121 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG--RYYLKRGEYVAAIPRF 213 + Y + V A Y R +++ I YY R + +A+ R Sbjct: 122 PEDVELMYEWAKEVAAAGKYYEAIR---VYRDILIAHPEYYEARVDLGSALIRA 172 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 34/236 (14%), Positives = 70/236 (29%), Gaps = 51/236 (21%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G E++SS++ +D +YE A + +A + P Sbjct: 104 MGREKESSQEYRTAYDSDPEDVELMYEWAKEVAAAGKYYEAIRVYRDILIAHP--EYYE- 160 Query: 96 SLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 + + AG +Y A + P++ + +++G + + + Sbjct: 161 ARVDLGSALIRAGKENEGYEEYALARASD-------PDNPMIP---FMIG----EFLLSM 206 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 L E N IG ++G Sbjct: 207 DR----LDEALDAFKSAQELSPN---APDVYRR--------------IGDVLHRKGRVDE 245 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSL--IQERYPQGY 261 AI ++ + H E A L + Y+ + D+A RE + ++ +P Sbjct: 246 AISEYKKAIR---QKPHDVELHAGLGDLYLEKGMKDDAVREYRRVKKLEPEFPLSE 298 >gi|109465788|ref|XP_001059136.1| PREDICTED: tetratricopeptide repeat domain 37 [Rattus norvegicus] Length = 1563 Score = 39.7 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 10/133 (7%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVR-YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 A+ L LD ++D + + + L KA + +P Sbjct: 359 ALLKLSDCASLEEAVHILDQLSDTDNTPGLLVLQGLACLNTGAIDKATKIMEDLVASYP- 417 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 ++ L A+V ++ Y QA + + + + V +Y +G++Y M + Sbjct: 418 -DLSEAHALE-AYVHFTKKDYVQAETSFQRALE---KDAEVAEYHYQLGLTYWLMGEETR 472 Query: 150 YDQRATKLMLQYM 162 D+ L + Sbjct: 473 KDRT---KALNHF 482 >gi|119357636|ref|YP_912280.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119354985|gb|ABL65856.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266] Length = 3560 Score = 39.7 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 62/174 (35%), Gaps = 23/174 (13%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 + +A + + P A + A + Y + +Y++A + + I P D Sbjct: 132 RYEEALASYEKAIAINP--DFAE-AYYNRAVIFYDSDRYEEALASYDRAIVLKP-----D 183 Query: 132 Y--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 Y Y G Y ++ R + K + E Y N + A + L Sbjct: 184 YVEAYANRGNVYLKLKRYEDA-LGSYKKAIALKLECDEAYYN---MGNALLELQRYEEAL 239 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQL--VLANYSDA-EHAEEAMARL---VEAY 237 A+ E I LK + A R + VL Y DA E+A+A EAY Sbjct: 240 ASYEKAIA---LKVDYFEAYSNRGVVLLVLRRYEDALVSYEKAIALKPHHAEAY 290 Score = 39.3 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 41/131 (31%), Gaps = 21/131 (16%) Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 +Y++A + E I P + Y G + +M + K L+ Sbjct: 2980 ALQELKRYEEALASYERAIVLKP---DYADAYSNRGNTLMKMNQ--------YKEALESY 3028 Query: 163 SRIVERYTNSPYV----KGARFYVTVGRNQLAAKEVEI------GRYYLKRGEYVAAIPR 212 R + + A + LA+ E I Y RG + + R Sbjct: 3029 ERAIALKPENADACFHQGNALQELKRYNESLASYEKAIALKSVNAEVYAHRGVVLQKLSR 3088 Query: 213 FQLVLANYSDA 223 F+ + NY A Sbjct: 3089 FEDAVLNYKQA 3099 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 9/66 (13%) Query: 64 AVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 A + + + ++ A F + D P + + G+Y++A + E+ Sbjct: 2265 ASMATRRKKYTDAVSLFERALEIDPDHPVSWCT------LGIALHELGRYEEALASYEKA 2318 Query: 121 ITQYPE 126 I YP Sbjct: 2319 IVLYPG 2324 >gi|330872881|gb|EGH07030.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 252 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 9/63 (14%) Query: 64 AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + LK N +A E F + R P +SLL A + Y +Y A + + Sbjct: 148 GMTSLKLGNREQAREQFTKALRLDRQQP------RSLLEMAQLYYEDRQYVPARDYYDRF 201 Query: 121 ITQ 123 Sbjct: 202 SQL 204 >gi|225549799|ref|ZP_03770763.1| FF domain protein [Borrelia burgdorferi 118a] gi|225369607|gb|EEG99056.1| FF domain protein [Borrelia burgdorferi 118a] Length = 1119 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK+ N+ A ++ P + + A +G QA S E+ Sbjct: 948 LYLKASINLKKGNYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 1004 Query: 120 YI 121 I Sbjct: 1005 II 1006 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117 + ++ NF ++ +Y N F A+K ++ + ++ K +++ Sbjct: 881 KAGIVSNNLGNFKQSEKYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 934 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175 + I P + +Y YL + + + S ++E+ S Y+ Sbjct: 935 NKAIDLNP--EKSEY-LYLKASINLKK--------GNYQNAISLYSLVIEKNPENTSAYI 983 Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222 A+ Y G A +E +G Y K Y AI F+ + N Sbjct: 984 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 1040 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259 EA L + + A++++ ++ P+ Sbjct: 1041 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1078 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 83/279 (29%), Gaps = 74/279 (26%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSR 85 ++A + + + + Y + Q + Y+ ++ K + + + E F+ + Sbjct: 747 TLAQAYENNGDLLKAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDP 806 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +K+L K ++A E+ I KN YY G++ Sbjct: 807 KH------KKALHNKGIALMMLNKNKKAIESFEKAIQI---DKNYSTAYYQKGIA----- 852 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------------RFYVTVGR------ 186 + D + + + ++ N Y A Y+ Sbjct: 853 EEKNGDMQQAFESFKNAYNLDKK-PN--YALKAGIVSNNLGNFKQSEKYLNFFNANAKKP 909 Query: 187 NQLAAKEVEIGRY------------------------Y--------LKRGEYVAAIPRFQ 214 N++A + I ++ Y LK+G Y AI + Sbjct: 910 NEIAIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKGNYQNAISLYS 969 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 LV+ + A L +AY +A + I Sbjct: 970 LVIEKNPENTSAY---INLAKAYEKSGNKSQAISTLEKI 1005 Score = 35.5 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 11/124 (8%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + ++ D + + + A + + KA + + + ++ + Sbjct: 732 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNTQEDHYKLGII 784 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 ++ KY+ + ++ I P+ K + G++ + ++ K ++ Sbjct: 785 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 833 Query: 164 RIVE 167 + ++ Sbjct: 834 KAIQ 837 >gi|34540729|ref|NP_905208.1| TPR domain-containing protein [Porphyromonas gingivalis W83] gi|34397043|gb|AAQ66107.1| TPR domain protein [Porphyromonas gingivalis W83] Length = 750 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 16/126 (12%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFP 88 C++VG ++ +D D ++ Y + V + K+ ++ +A + F++ F Sbjct: 34 GCYIVGSYEEAIKDYSKAIELDGKFIPAYYNRGVAYFKKGSYEEAIKDFSKAIELDDKFV 93 Query: 89 FAGVARKSLLMSAFVQ---YSA--GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 A R +A+ + Y Y QA L ++YI Y + V Y G SY + Sbjct: 94 HAYHGR----GNAYSKKGWYKKAIKDYSQAIELDDKYILGY-NGRGVAYCE--KG-SYEE 145 Query: 144 MIRDVP 149 I+D Sbjct: 146 AIKDYS 151 >gi|15594555|ref|NP_212344.1| surface-located membrane protein 1 (lmp1) [Borrelia burgdorferi B31] gi|13324578|gb|AAK18792.1|AF305600_1 LMP1 [Borrelia burgdorferi] gi|13324582|gb|AAK18794.1|AF305602_1 LMP1 [Borrelia burgdorferi] gi|13324586|gb|AAK18796.1|AF305604_1 LMP1 [Borrelia burgdorferi] gi|13324590|gb|AAK18798.1|AF305606_1 LMP1 [Borrelia burgdorferi] gi|2688100|gb|AAC66595.1| surface-located membrane protein 1 (lmp1) [Borrelia burgdorferi B31] Length = 1119 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117 + ++ NF ++ EY N F A+K ++ + ++ K +++ Sbjct: 881 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 934 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175 + I P + +Y YL + + + S ++E+ S Y+ Sbjct: 935 NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 983 Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222 A+ Y G A +E +G Y K Y AI F+ + N Sbjct: 984 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 1040 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259 EA L + + A++++ ++ P+ Sbjct: 1041 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1078 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK++N+ A ++ P + + A +G QA S E+ Sbjct: 948 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 1004 Query: 120 YI 121 I Sbjct: 1005 II 1006 Score = 35.5 bits (81), Expect = 7.7, Method: Composition-based stats. Identities = 11/124 (8%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + ++ D + + + A + + KA + + + ++ + Sbjct: 732 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNTQEDHYKLGII 784 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 ++ KY+ + ++ I P+ K + G++ + ++ K ++ Sbjct: 785 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 833 Query: 164 RIVE 167 + ++ Sbjct: 834 KAIQ 837 Score = 35.5 bits (81), Expect = 8.1, Method: Composition-based stats. Identities = 39/279 (13%), Positives = 77/279 (27%), Gaps = 74/279 (26%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSR 85 ++A + + + + Y + Q + Y+ ++ K + + + E F+ + Sbjct: 747 TLAQAYENNGDLLKAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDP 806 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +K+L K ++A E+ I KN YY G++ + Sbjct: 807 KH------KKALHNKGIALMMLNKNKKAIESFEKAIQI---DKNYGTAYYQKGIAEEKN- 856 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------------RFYVTVGR------ 186 + N Y A Y+ Sbjct: 857 -------GDMQQAFASFKNAYNLDKNPNYALKAGIVSNNLGNFKQSEEYLNFFNANAKKP 909 Query: 187 NQLAAKEVEIGRY------------------------Y--------LKRGEYVAAIPRFQ 214 N++A + I ++ Y LK+ Y AI + Sbjct: 910 NEIAIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNAISLYS 969 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 LV+ + A L +AY +A + I Sbjct: 970 LVIEKNPENTSAY---INLAKAYEKSGNKSQAISTLEKI 1005 >gi|315182005|gb|ADT88918.1| hypothetical protein vfu_B00697 [Vibrio furnissii NCTC 11218] Length = 653 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 33/86 (38%), Gaps = 17/86 (19%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCS----RDF----------PFAGVAR---KSLLMSAFVQ 104 ++A+ +++++ A E F + F+ V+ +S A Sbjct: 349 QQAMQAFEQKDYQHAAEQFTDPQWQGIARYEAKDYQGAIDAFSQVSAPDSRSQYNLANAY 408 Query: 105 YSAGKYQQAASLGEEYITQYPESKNV 130 AG+ +QA ++ + P++ + Sbjct: 409 AQAGQLEQARDRYQQLLQTDPDNADA 434 >gi|299140488|ref|ZP_07033626.1| aerotolerance-related exported protein [Prevotella oris C735] gi|298577454|gb|EFI49322.1| aerotolerance-related exported protein [Prevotella oris C735] Length = 255 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 10/69 (14%), Positives = 23/69 (33%), Gaps = 4/69 (5%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +A +E+ + +A + + +GV+ Y G +A E Sbjct: 31 AEADKAYQEKKYQQAIKDYESL--LH--SGVSASLYYNLGNAYYRTGNITKAILNYERAA 86 Query: 122 TQYPESKNV 130 P + ++ Sbjct: 87 LLEPGNSDI 95 >gi|218780060|ref|YP_002431378.1| hypothetical protein Dalk_2217 [Desulfatibacillum alkenivorans AK-01] gi|218761444|gb|ACL03910.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans AK-01] Length = 702 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 61/231 (26%), Gaps = 59/231 (25%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 +A+ G + + ++ + + Y + ++ KA YF + Sbjct: 443 LGLALAH-AGRDDDAFKEFQKAVELKPDFAQANYNIGISLGHQEEHEKAIPYFEKAVEKE 501 Query: 88 PFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQY----------PESKNVDYVYY 135 P L A AG+ + A + Y P N+ Sbjct: 502 P-----ENVLYLNDLALAYMGAGRLEDAIT------RLYQALRIEPEYAPTHNNLGVAL- 549 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 Q L++ + VE Y + Y A + + L Sbjct: 550 --------------GGQAMVTQALEHFRKAVEIYPD--YA-DAHRNLGILLGNLDNHPKA 592 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 I + + V+ +A L +Y A+ ++A Sbjct: 593 IAEF--------------EKVIKLLPR---DPQANFLLGRSYAAVGKYEKA 626 >gi|159899989|ref|YP_001546236.1| TPR repeat-containing serine/threonin protein kinase [Herpetosiphon aurantiacus ATCC 23779] gi|159893028|gb|ABX06108.1| serine/threonine protein kinase with TPR repeats [Herpetosiphon aurantiacus ATCC 23779] Length = 916 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 39/126 (30%), Gaps = 13/126 (10%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 ++ KA E F + P ++ A Y Y +A L E+ I P Sbjct: 778 LYDTKDTDKAIETFKKALERDP--EY-PNAIAGLADTYYDTRYYDEALKLYEQTINLQP- 833 Query: 127 SKNVDYV-YYL-VGMSYAQMIR-DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 DY YL D DQ +T L Y + Y Y A+ + Sbjct: 834 ----DYATAYLGKANILYNNKDYDAAIDQYST--ALDYNPSLKNAYIGKAYCYQAKGDID 887 Query: 184 VGRNQL 189 R L Sbjct: 888 EARQVL 893 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 63/187 (33%), Gaps = 43/187 (22%) Query: 70 EQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQ-YSAGKYQQAASLGEEYITQYPE 126 + +++ A + + P + + +V Y +A ++ + + PE Sbjct: 746 QSDYAAAIRDYEAAIAEAPSWLSVY-----VDLGYVYLYDTKDTDKAIETFKKALERDPE 800 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYVKGARFYVTV 184 N + G++ D YD R L+ + + + + Y+ A Sbjct: 801 YPNA-----IAGLA------DTYYDTRYYDEALKLYEQTINLQPDYATAYLGKA------ 843 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 N L +Y AAI ++ L ++A A Y A +D Sbjct: 844 --NIL-----------YNNKDYDAAIDQYSTALDYNPSLKNAYIGKAY---CYQAKGDID 887 Query: 245 EAREVVS 251 EAR+V+ Sbjct: 888 EARQVLQ 894 >gi|13324592|gb|AAK18799.1|AF305607_1 LMP1 [Borrelia burgdorferi] Length = 1065 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117 + ++ NF ++ EY N F A+K ++ + ++ K +++ Sbjct: 827 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 880 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175 + I P + +Y YL + + + S ++E+ S Y+ Sbjct: 881 NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 929 Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222 A+ Y G A +E +G Y K Y AI F+ + N Sbjct: 930 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 986 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259 EA L + + A++++ ++ P+ Sbjct: 987 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1024 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK++N+ A ++ P + + A +G QA S E+ Sbjct: 894 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 950 Query: 120 YI 121 I Sbjct: 951 II 952 Score = 35.9 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 11/124 (8%), Positives = 44/124 (35%), Gaps = 18/124 (14%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + ++ D + + + A + + KA + + ++ ++ + Sbjct: 678 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKITKL----TNTQEDHYKLGII 730 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 ++ KY+ + ++ I P+ K + G++ + ++ K ++ Sbjct: 731 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 779 Query: 164 RIVE 167 + ++ Sbjct: 780 KAIQ 783 Score = 35.5 bits (81), Expect = 8.9, Method: Composition-based stats. Identities = 39/279 (13%), Positives = 76/279 (27%), Gaps = 74/279 (26%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSR 85 ++A + + + + Y Q + Y+ ++ K + + + E F+ + Sbjct: 693 TLAQAYENNGDLLKAENAYEKITKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDP 752 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +K+L K ++A E+ I KN YY G++ + Sbjct: 753 KH------KKALHNKGIALMMLNKNKKAIESFEKAIQI---DKNYGTAYYQKGIAEEKN- 802 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------------RFYVTVGR------ 186 + N Y A Y+ Sbjct: 803 -------GDMQQAFASFKNAYNLDKNPNYALKAGIVSNNLGNFKQSEEYLNFFNANAKKP 855 Query: 187 NQLAAKEVEIGRY------------------------Y--------LKRGEYVAAIPRFQ 214 N++A + I ++ Y LK+ Y AI + Sbjct: 856 NEIAIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNAISLYS 915 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 LV+ + A L +AY +A + I Sbjct: 916 LVIEKNPENTSAY---INLAKAYEKSGNKSQAISTLEKI 951 >gi|300864595|ref|ZP_07109454.1| putative Tetratricopeptide repeat domain protein [Oscillatoria sp. PCC 6506] gi|300337419|emb|CBN54602.1| putative Tetratricopeptide repeat domain protein [Oscillatoria sp. PCC 6506] Length = 851 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 88/254 (34%), Gaps = 51/254 (20%) Query: 45 DVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAY----EYFNQCSRDFPFAGVARKSLLM 99 + + ++ E Y + L + +++ ++ P ++ L Sbjct: 541 ERLKSNHPELFLNVEDYINEGNSLLSQGRYNEVISNCDRALE-IKQNCP-EIWYQRGL-- 596 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Q+ ++++A + + I + N+ +Y G++ ++ R + + Sbjct: 597 ---AQWELQQFEEAKAAFDRAIELKTDDANI---WYHRGITLKEL--------RRYEAAI 642 Query: 160 QYMSRIVERYTNSPYVK----GARFYVTVGRNQLA--AKEVEIGRYYLKRGEYVAAIPRF 213 ++++E A + + +A K +EI Y R +V R Sbjct: 643 ADFNQVLEIQPQDSKAWLHRGLALAKLKRAEDAIASFDKAIEINPDY--REAWV---NRG 697 Query: 214 ---------QLVLANYSDAEHAE--EAMARLVEAYVALALMDEAREVVS----LIQERYP 258 + ++ A H E +A+A L +AL +++ E ++ I+ Y Sbjct: 698 VALGTLQQEEEAFKSFDRAVHVEPDDAVAWLNRG-LALGVLERYEEAIASFDKSIELNYE 756 Query: 259 QGY-WARYVETLVK 271 W E LVK Sbjct: 757 SYKAWNSRGEILVK 770 >gi|297690841|ref|XP_002822814.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4-like [Pongo abelii] Length = 459 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 18/146 (12%), Positives = 46/146 (31%), Gaps = 30/146 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109 E+ ++ KE + +A + + + A+K+ L A Sbjct: 275 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQA 334 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + +L ++++ Y Sbjct: 335 FSAAIESCNKALELDSNNEKG---LFRRGEAHLAVND--------FELARADFQKVLQLY 383 Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191 ++ A+ + V R QLA Sbjct: 384 PSNK---AAKTQLAVCQQRIRRQLAR 406 >gi|195998427|ref|XP_002109082.1| hypothetical protein TRIADDRAFT_52748 [Trichoplax adhaerens] gi|190589858|gb|EDV29880.1| hypothetical protein TRIADDRAFT_52748 [Trichoplax adhaerens] Length = 548 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 39/109 (35%), Gaps = 22/109 (20%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKS--LLMSAF 102 + Y AV+ + KA E F + ++P ++S + Sbjct: 184 HTDVAQSYYNLAVVKKTQGKDDKALELFEKSLEIYLLLLDDNYP---DIKQSFIYINIGK 240 Query: 103 VQYSAGKYQQAASLGEE-------YITQYPESKNVDYVYYLVGMSYAQM 144 + Y +Y +A ++ E+ ++ + +V Y+Y +G Y Sbjct: 241 IYYRLKRYDEALAMYEKSLNAKLLFLDN--DHPDVAYLYSKMGNVYDDQ 287 >gi|216264585|ref|ZP_03436577.1| FF domain protein [Borrelia burgdorferi 156a] gi|215981058|gb|EEC21865.1| FF domain protein [Borrelia burgdorferi 156a] Length = 1173 Score = 39.7 bits (92), Expect = 0.44, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117 + ++ NF ++ EY N F A+K ++ + ++ K +++ Sbjct: 935 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 988 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175 + I P + +Y YL + + + S ++E+ S Y+ Sbjct: 989 NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 1037 Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222 A+ Y G A +E +G Y K Y AI F+ + N Sbjct: 1038 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 1094 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259 EA L + + A++++ ++ P+ Sbjct: 1095 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1132 Score = 37.8 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK++N+ A ++ P + + A +G QA S E+ Sbjct: 1002 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 1058 Query: 120 YI 121 I Sbjct: 1059 II 1060 Score = 35.5 bits (81), Expect = 7.7, Method: Composition-based stats. Identities = 11/124 (8%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + ++ D + + + A + + KA + + + ++ + Sbjct: 786 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNTQEDHYKLGII 838 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 ++ KY+ + ++ I P+ K + G++ + ++ K ++ Sbjct: 839 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 887 Query: 164 RIVE 167 + ++ Sbjct: 888 KAIQ 891 Score = 35.5 bits (81), Expect = 7.9, Method: Composition-based stats. Identities = 39/279 (13%), Positives = 77/279 (27%), Gaps = 74/279 (26%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSR 85 ++A + + + + Y + Q + Y+ ++ K + + + E F+ + Sbjct: 801 TLAQAYENNGDLLKAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDP 860 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +K+L K ++A E+ I KN YY G++ + Sbjct: 861 KH------KKALHNKGIALMMLNKNKKAIESFEKAIQI---DKNYGTAYYQKGIAEEKN- 910 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------------RFYVTVGR------ 186 + N Y A Y+ Sbjct: 911 -------GDMQQAFASFKNAYNLDKNPNYALKAGIVSNNLGNFKQSEEYLNFFNANAKKP 963 Query: 187 NQLAAKEVEIGRY------------------------Y--------LKRGEYVAAIPRFQ 214 N++A + I ++ Y LK+ Y AI + Sbjct: 964 NEIAIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNAISLYS 1023 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 LV+ + A L +AY +A + I Sbjct: 1024 LVIEKNPENTSAY---INLAKAYEKSGNKSQAISTLEKI 1059 >gi|291613009|ref|YP_003523166.1| hypothetical protein Slit_0539 [Sideroxydans lithotrophicus ES-1] gi|291583121|gb|ADE10779.1| Tetratricopeptide TPR_2 repeat protein [Sideroxydans lithotrophicus ES-1] Length = 544 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 36/101 (35%), Gaps = 14/101 (13%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSR----DFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + + +K + + A F + + P A ++G+YQ+A Sbjct: 433 YFNRGQALMKAKKWEAAASDFERSAAISPQLAPIHRY-------LADAYSNSGQYQKALI 485 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 ++ I ++ Y+ GM ++ R+ Q+ + Sbjct: 486 QYDQAIDLN--HRDAG-TYFGKGMVLKRLHRNDEARQQMVR 523 >gi|188993860|ref|YP_001905870.1| hypothetical protein xccb100_4465 [Xanthomonas campestris pv. campestris str. B100] gi|167735620|emb|CAP53838.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris] Length = 919 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 18/126 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E+ + KE+ ++ A E F + + P A + FV Y +Y +AA E + Sbjct: 810 ERGLQLYKEKRYADAAEQFAEALKLRP--DFA-LAANNLGFVYYRQERYAEAARWLENTL 866 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGAR 179 P ++Y + D+ + + + AR Sbjct: 867 KIDPS----------RAVAYLNLGDAYAKAGDREKARKAYTTYLALQ---PQGAGAEQAR 913 Query: 180 FYVTVG 185 + Sbjct: 914 AQLQTL 919 >gi|221217537|ref|ZP_03589007.1| surface-located membrane protein 1 [Borrelia burgdorferi 72a] gi|13324584|gb|AAK18795.1|AF305603_1 LMP1 [Borrelia burgdorferi] gi|221192600|gb|EEE18817.1| surface-located membrane protein 1 [Borrelia burgdorferi 72a] Length = 1011 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK+ N+ A ++ P + + A +G QA S E+ Sbjct: 840 LYLKASINLKKGNYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 896 Query: 120 YI 121 I Sbjct: 897 II 898 Score = 39.3 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117 + ++ NF ++ +Y N F A+K ++ + ++ K +++ Sbjct: 773 KAGIVSNNLGNFKQSEKYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 826 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175 + I P + +Y YL + + + S ++E+ S Y+ Sbjct: 827 NKAIDLNP--EKSEY-LYLKASINLKK--------GNYQNAISLYSLVIEKNPENTSAYI 875 Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222 A+ Y G A +E +G Y K Y AI F+ + N Sbjct: 876 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 932 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259 EA L + + A++++ ++ P+ Sbjct: 933 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 970 Score = 35.9 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 83/279 (29%), Gaps = 74/279 (26%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSR 85 ++A + + + + Y + Q + Y+ ++ K + + + E F+ + Sbjct: 639 TLAQAYENNGDLLKAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDP 698 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +K+L K ++A E+ I KN YY G++ Sbjct: 699 KH------KKALHNKGIALMMLNKNKKAIESFEKAIQI---DKNYSTAYYQKGIA----- 744 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------------RFYVTVGR------ 186 + D + + + ++ N Y A Y+ Sbjct: 745 EEKNGDMQQAFESFKNAYNLDKK-PN--YALKAGIVSNNLGNFKQSEKYLNFFNANAKKP 801 Query: 187 NQLAAKEVEIGRY------------------------Y--------LKRGEYVAAIPRFQ 214 N++A + I ++ Y LK+G Y AI + Sbjct: 802 NEIAIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKGNYQNAISLYS 861 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 LV+ + A L +AY +A + I Sbjct: 862 LVIEKNPENTSAY---INLAKAYEKSGNKSQAISTLEKI 897 Score = 35.1 bits (80), Expect = 9.6, Method: Composition-based stats. Identities = 11/124 (8%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + ++ D + + + A + + KA + + + ++ + Sbjct: 624 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNTQEDHYKLGII 676 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 ++ KY+ + ++ I P+ K + G++ + ++ K ++ Sbjct: 677 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 725 Query: 164 RIVE 167 + ++ Sbjct: 726 KAIQ 729 >gi|73536500|ref|XP_847674.1| hypothetical protein [Leishmania major strain Friedlin] gi|321438587|emb|CBZ12346.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 693 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 ++++ + +A E +FP + A + LM A+ Y G Y +AASL E+ P Sbjct: 61 YIRDHQYEEAVELLATQLEEFPRSRAA--ASLM-AYCYYMMGDYGEAASLYEQLTKICPN 117 Query: 127 SKNVDY-VYY 135 + Y VYY Sbjct: 118 IEE--YRVYY 125 >gi|58263492|ref|XP_569156.1| peroxisome targeting sequence binding protein [Cryptococcus neoformans var. neoformans JEC21] gi|134108322|ref|XP_777112.1| hypothetical protein CNBB3440 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259797|gb|EAL22465.1| hypothetical protein CNBB3440 [Cryptococcus neoformans var. neoformans B-3501A] gi|57223806|gb|AAW41849.1| peroxisome targeting sequence binding protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 799 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 38/112 (33%), Gaps = 8/112 (7%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCS 84 + + G + + D +L ++ +Y + S+A +Y++Q Sbjct: 641 VALGVLFNMSGGQDYSKAEDCFLAALEARPEDWLLYNRLGATLANSGRSSEAVQYYHQAL 700 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV--DYVY 134 R P ++L + G+YQ AA + + + Y Y Sbjct: 701 RLHPG---FVRALFNLGIAYMNLGEYQTAAQSILDALRL--QHSEASEAYAY 747 >gi|110636747|ref|YP_676954.1| DNAJ-like chaperone; heat shock protein [Cytophaga hutchinsonii ATCC 33406] gi|110279428|gb|ABG57614.1| DNAJ-like chaperone; heat shock protein [Cytophaga hutchinsonii ATCC 33406] Length = 211 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 37/111 (33%), Gaps = 24/111 (21%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + L +F I+ C Q D + + A +++ + + A+ Sbjct: 1 MKQLILFLFLVIS-CSTFAHNHQVQYDSLV---------ETYFASAKKYMQAKKYDSAHV 50 Query: 79 YFNQCSRDFPFAGVARKSLL--MSAFVQ----YSAGKYQQAASLGEEYITQ 123 F + KS + +A+ Y Y+QA E+YI Sbjct: 51 QFKALFKL--------KSTIPDEAAYYYGLNQYYRNNYKQALQGFEKYIKL 93 >gi|262193821|ref|YP_003265030.1| hypothetical protein Hoch_0498 [Haliangium ochraceum DSM 14365] gi|262077168|gb|ACY13137.1| conserved hypothetical protein [Haliangium ochraceum DSM 14365] Length = 368 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 16/92 (17%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + + R + ++E+ + + +F A + Q FP A +LL + G Sbjct: 55 NELAARRAAKPLFEEGRTLMDQGDFRAAADKLQQAQDTFP----AVGTLLNLGVCRRELG 110 Query: 109 K-------YQQAASLGEEYITQYPESKNVDYV 133 + +++AA L E + + VDY Sbjct: 111 ETIAAWEAFREAAELAER-----TKDERVDYA 137 >gi|242053671|ref|XP_002455981.1| hypothetical protein SORBIDRAFT_03g028430 [Sorghum bicolor] gi|241927956|gb|EES01101.1| hypothetical protein SORBIDRAFT_03g028430 [Sorghum bicolor] Length = 364 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 12/86 (13%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQA 113 ++ KA + +F A E + Q P A ++ G Y +A Sbjct: 2 AASDLESKAKEAFVDDDFELAAELYTQAIDAGPATAELYADRAQ-----AHIKLGNYTEA 56 Query: 114 ASLGEEYITQYPE-SKNVDYVYYLVG 138 + + I P K YY G Sbjct: 57 VADANKAIELDPTMHK----AYYRKG 78 >gi|216264005|ref|ZP_03435999.1| tetratricopeptide repeat domain protein [Borrelia afzelii ACA-1] gi|215980049|gb|EEC20871.1| tetratricopeptide repeat domain protein [Borrelia afzelii ACA-1] Length = 1013 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK N+ A +N P + + A +G QA S E+ Sbjct: 842 LYLKASINLKNGNYQNAIPLYNLVIEKNPEN---ISAYINLAKAYEKSGNKTQAISTLEK 898 Query: 120 YI 121 I Sbjct: 899 II 900 Score = 38.9 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 32/109 (29%), Gaps = 31/109 (28%) Query: 69 KEQNFSKAYEYFNQ------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 ++N+ KA E F + + A +A L +EY Sbjct: 917 NQKNYQKAIEIFEKAIINSDIEAKY-----------NLATTLIEINDNTRAKDLLKEYTK 965 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 P + Y G+ + DQ + +++++ N Sbjct: 966 LKPNNPEALYAL---GIIEYNENNN---DQT--------LRELIKKFPN 1000 >gi|16265215|ref|NP_438007.1| TonB-dependent receptor protein [Sinorhizobium meliloti 1021] gi|15141355|emb|CAC49867.1| hypothetical exported protein, TonB-dependent receptor protein [Sinorhizobium meliloti 1021] Length = 1200 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 28/93 (30%), Gaps = 3/93 (3%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 ++ R++ D + + + ++ KA E S P + + L Sbjct: 492 MAEAKREIDAALSVDPSFDVALVARGRYHMQNGEADKAVEDLLAGSTANP--AYS-NAQL 548 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 + A Y G AA + P V Sbjct: 549 LLAAAHYEKGDRIPAAQALDNADRLDPNDPVVA 581 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 12/100 (12%) Query: 101 AFVQYS---AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 A Y + A + E + P S ++ + +G+ ++ D RA + Sbjct: 412 ARAHYRYHIDNDLEGALADLERALKTAPGSSSI---WNSLGL-----VQGARGDNRAAEA 463 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + S + A Y+ R A +E++ Sbjct: 464 AFKQAIALDPLDPVS-HANLAIQYMDEMRMAEAKREIDAA 502 >gi|67526011|ref|XP_661067.1| hypothetical protein AN3463.2 [Aspergillus nidulans FGSC A4] gi|40743817|gb|EAA63003.1| hypothetical protein AN3463.2 [Aspergillus nidulans FGSC A4] gi|259485544|tpe|CBF82655.1| TPA: DnaJ and TPR domain protein (AFU_orthologue; AFUA_3G05400) [Aspergillus nidulans FGSC A4] Length = 519 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 19/126 (15%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY----LKRGE 205 D+ + ++Y+S E + S V+ + + + K YY + + Sbjct: 360 LDEDRFEDAIRYLSTAKEHHPQSKEVQTLLQKAMILQKRSKQK-----DYYKVLGVSKDA 414 Query: 206 YVAAIPRF--QLVLANYSDAEHA-----EEAMARLV---EAYVALALMDEAREVVSLIQE 255 AI R QLV ++ D + EEA R+ EAY L+ + + S + Sbjct: 415 DEKAIKRAYRQLVKQHHPDKAGSQGITKEEAEKRMAGINEAYEVLSDPELRAQYDSGVDP 474 Query: 256 RYPQGY 261 P+ Sbjct: 475 NDPESQ 480 >gi|85682788|gb|ABC73376.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 252 [Homo sapiens] Length = 887 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 40/141 (28%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFRWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|302340547|ref|YP_003805753.1| hypothetical protein Spirs_4077 [Spirochaeta smaragdinae DSM 11293] gi|301637732|gb|ADK83159.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM 11293] Length = 820 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 3/72 (4%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 RE+YE A L ++ A +Y +Q +P L++S + G++ +AA Sbjct: 2 TPRELYELARDALSLHDYETAKQYTDQLESLYPDN---LSVLILSGTIAMKRGRFAEAAG 58 Query: 116 LGEEYITQYPES 127 E ++ P++ Sbjct: 59 TFERILSFAPDN 70 >gi|225621427|ref|YP_002722686.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] gi|225216248|gb|ACN84982.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] Length = 453 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 81/272 (29%), Gaps = 77/272 (28%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 + ++V +D + ++ + K + +++A +Y+++ + P Sbjct: 82 DNKKEVDIDHLNNLTDYHDYNSKGIYKSANGEYAEAIKYYDEAIKLNP----------NM 131 Query: 101 AFVQY-------SAGKYQQAASLGEEYITQYPESKNVD--YVYYLVGMSYAQM------I 145 A Y G ++A ++ I D Y YY G+ + + I Sbjct: 132 ADAYYNKAIAKTKLGLLKEAIEEYDKAIEL-----RADYTYAYYNRGLLKSDLGLLEEAI 186 Query: 146 RDVPY----DQ----------------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 +D D +K ++ ++ ++ N Y Sbjct: 187 KDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNPN--YALAYNNR-GNA 243 Query: 186 RNQLAAKEVEIGRY-------------YLKRGE-------YVAAIPRFQLVLANYSDAEH 225 ++ L E I Y Y RG Y AI F + + Sbjct: 244 KDNLGLYEEAIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIELNPNYT- 302 Query: 226 AEEAMARLVEAYVALALMDEA-REVVSLIQER 256 +A A L L +EA ++ I+ Sbjct: 303 --DAYNNRGNAKYDLGLYEEAIKDYDKAIKLN 332 >gi|149369276|ref|ZP_01889128.1| gliding motility-related protein; TPR repeat-containing protein [unidentified eubacterium SCB49] gi|149356703|gb|EDM45258.1| gliding motility-related protein; TPR repeat-containing protein [unidentified eubacterium SCB49] Length = 892 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 85/239 (35%), Gaps = 35/239 (14%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 LYK IFF++ V L R+ + + +Y V + S Sbjct: 1 MKHLYKL---IFFALTVILLAACSRKKDSFINRNYHAVTGEFNALYNGGV-AFDKGKESL 56 Query: 76 AYEYFNQCSRDFPFAGVARKSLL----MSAFVQYSAGKYQQAASLGEE---YITQYPESK 128 A Y + P + K + S ++ + ++A + ++ YI + Sbjct: 57 AQTYNDNFWEVLPIERMETKDEIVLPGESKDPNFNRAE-EKAVKMIQKHGMYIDGKEHNP 115 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 VD Y L+G + R +P L + I++RY S + A+ + + Sbjct: 116 QVDEAYLLLGKTRYFDQRFIP--------ALDAFNFILDRYPTSNNINKAKVWKAKTNIR 167 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEAMARLVEAYVALALMDEA 246 L +EV AI + +L D E EA A + EAY+ + + EA Sbjct: 168 LKNEEV--------------AIKNLKKMLEAEEIDDEDLSEASASIAEAYLQMDSIPEA 212 >gi|110597764|ref|ZP_01386048.1| TPR repeat:Tetratricopeptide TPR_4 [Chlorobium ferrooxidans DSM 13031] gi|110340671|gb|EAT59151.1| TPR repeat:Tetratricopeptide TPR_4 [Chlorobium ferrooxidans DSM 13031] Length = 542 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 56/193 (29%), Gaps = 59/193 (30%) Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + G + +A ++ + P+ + V++ G+ V D Sbjct: 359 INLGIAYVQNGDFDKAVDAYQQAVRINPDDAS---VWFNTGL--------VCRDAGQAAK 407 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY---LKRGEYVAAIPRFQ 214 + V + A +++G Y +R + A Sbjct: 408 AVDAFEHAVRIAPEN-----------------AQYRLKLGEAYGLIDQRARQIEAYNEAL 450 Query: 215 LVLANYSDA------------EHAEE----------------AMARLVEAYVALALMDEA 246 + +Y DA AEE A+ L + Y+ +EA Sbjct: 451 RIKQDYDDAWVSLGVVYGIAGREAEEREAYLKALRINPGHNAALFNLGKDYLEHNNREEA 510 Query: 247 REVVSLIQERYPQ 259 RE+ S ++ P+ Sbjct: 511 REIYSRLKRLNPE 523 >gi|109053865|ref|XP_001092797.1| PREDICTED: prolyl 3-hydroxylase 2 isoform 3 [Macaca mulatta] Length = 705 Score = 39.7 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P+ ++V L + Y + + D D A+ + Sbjct: 311 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSIDP-ASIEARED 364 Query: 162 MSRIVERY 169 ++ V+R+ Sbjct: 365 LTMFVKRH 372 >gi|268317307|ref|YP_003291026.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus marinus DSM 4252] gi|262334841|gb|ACY48638.1| Tetratricopeptide TPR_2 repeat protein [Rhodothermus marinus DSM 4252] Length = 906 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 27/60 (45%), Gaps = 5/60 (8%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-MSAFVQYSAGKYQQAASLGEE 119 Y + ++ ++ + +A + + + +P + LL + Y +G+Y++A + Sbjct: 759 YFRGKIYQRQGEYDRALDEWMKVVARYP----RDRVLLQEIGRIHYLSGRYEEALRWFDR 814 >gi|195339555|ref|XP_002036385.1| GM17712 [Drosophila sechellia] gi|194130265|gb|EDW52308.1| GM17712 [Drosophila sechellia] Length = 439 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 52/164 (31%), Gaps = 25/164 (15%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 LV + D + + +VY EK + K++N++ A + + +C P Sbjct: 231 LVDCGKGLEEWKLSDE--ERLAEAKVYKEKGTNYFKKENWALAIKMYTKCKNILPTTVHT 288 Query: 94 ----RKSLL----MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +K + A + + +A + KN Y G + Sbjct: 289 NEEVKKIKVATHSNIALCHQKSNDHFEAKQECNAVLDL---DKNNVKALYRRGQCNLTI- 344 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + L+ ++++ + A V + + +L Sbjct: 345 -------NELEDALEDFQKVIQLEPGNK---AAANQVIICKQKL 378 >gi|218437989|ref|YP_002376318.1| hypothetical protein PCC7424_0996 [Cyanothece sp. PCC 7424] gi|218170717|gb|ACK69450.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424] Length = 499 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 43/130 (33%), Gaps = 17/130 (13%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 Y Y + + + + + + KA E +NQ R P A FV Y +Y +A Sbjct: 386 YVNAYYNRGLTYYQLKEYDKAREDYNQALRINPQFIYAYNGR---GFVYYELKEYDKALE 442 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + +T + + YY G+ Y D + + +++ + Sbjct: 443 DYHQALTINSQFTH---AYYNRGLVY--------CDLKEYDKAREDYYKVLAIDP---HY 488 Query: 176 KGARFYVTVG 185 A + Sbjct: 489 TDAYKKLKDI 498 >gi|149924351|ref|ZP_01912719.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1] gi|149814789|gb|EDM74360.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1] Length = 1270 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 67/207 (32%), Gaps = 10/207 (4%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 R +Y A + K + + D P + + L A + G+ A Sbjct: 172 KRMDEALYYYAFELGELGEEQKMQAAYQRLINDHPNSPYIANAYLAFADYYFGKGQIGNA 231 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 L E +TQ+ +S Y Y + + I + L Y + Sbjct: 232 VRLYER-VTQFKDSPVYAYALYKLAWCHLNPIGEFD---ARYDKSLAYFVETINATKEGR 287 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY-SDAEHAEEAMAR 232 A + R+ A +++ R Y+ + A F+ V D + A M Sbjct: 288 AGSEANGK-QLRRD--ARRDL--VRAYVHAAKPSKAWAFFEKVGNGPGKDEQDARRMMEL 342 Query: 233 LVEAYVALALMDEAREVVSLIQERYPQ 259 L Y E+ + +Q+R+P+ Sbjct: 343 LANQYFGDGQYTESTSIYKELQKRFPE 369 >gi|30687816|ref|NP_189160.3| ROF1 (ROTAMASE FKBP 1); FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gi|73919362|sp|Q38931|FKB70_ARATH RecName: Full=70 kDa peptidyl-prolyl isomerase; AltName: Full=Peptidyl-prolyl cis-trans isomerase; Short=PPIase; AltName: Full=Peptidylprolyl isomerase ROF1; AltName: Full=Rotamase gi|1373396|gb|AAB82062.1| rof1 [Arabidopsis thaliana] gi|332643475|gb|AEE76996.1| rotamase FKBP 1 [Arabidopsis thaliana] Length = 551 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 52/151 (34%), Gaps = 26/151 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ----CSRDFPFA-GVARKSL-------LMSAFVQYSAGK 109 E+ K +S A + + + D F+ +++ L A + Sbjct: 405 EEGNSKFKGGKYSLASKRYEKAVKFIEYDTSFSEEEKKQAKALKVACNLNDAACKLKLKD 464 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+QA L + + ES NV Y +Y ++ D+ + K L E Sbjct: 465 YKQAEKLCTKVLEL--ESTNVK-ALYRRAQAYMELS-DLDLAEFDVKKAL-------EID 513 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 N+ VK + + + KE ++Y Sbjct: 514 PNNREVKLEQKRLKEKMKEFNKKE---AKFY 541 >gi|19113401|ref|NP_596609.1| transcriptional corepressor Ssn6 [Schizosaccharomyces pombe 972h-] gi|31340484|sp|O60184|CYC8_SCHPO RecName: Full=General transcriptional corepressor ssn6 gi|3116127|emb|CAA18877.1| transcriptional corepressor Ssn6 [Schizosaccharomyces pombe] Length = 1102 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 43/138 (31%), Gaps = 22/138 (15%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108 D + Y ++ +Q ++KAYE + Q P + Y Sbjct: 579 ADDTDAQSWYLIGRCYVAQQKYNKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 632 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +YQ A I P + V+Y +G Y + L R E Sbjct: 633 QYQDALDAYSRAIRLNP---YISEVWYDLGTLYESCHNQIS-------DALDAYQRAAEL 682 Query: 169 YTNSPYVKGARFYVTVGR 186 +P++ + + + R Sbjct: 683 DPTNPHI---KARLQLLR 697 >gi|67923599|ref|ZP_00517071.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] gi|67854569|gb|EAM49856.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] Length = 1115 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 39/98 (39%), Gaps = 12/98 (12%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGK 109 T + + ++AV + + +A + ++ +P + G LM F + Sbjct: 151 TTTDEVQRLIDQAVEQYQRGEYQEAVNTVVEITQQYPNDYQGWYYLGELMGTF-----QQ 205 Query: 110 YQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIR 146 Y+QA + ++ + P+ + G++ ++ R Sbjct: 206 YEQAIASYDKALQLKPDYHP----AWVNRGVALYELGR 239 Score = 35.9 bits (82), Expect = 6.7, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 71/223 (31%), Gaps = 39/223 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + V + + +++ + P VA + + G++ +A + ++ + Sbjct: 229 NRGVALYELGRLDEEIASYDKALQLKPDDDVAWN---NRGYALGNLGRWDEAIASYDKAL 285 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P + D +Y G++ + R + + ++ + Y Sbjct: 286 QLKP---DKDEAWYNRGIALFNLGR--------WDEAIASYDKALQLKPD--YHPAWDHR 332 Query: 182 VTVGRNQLAAKEVEIGRY---------YL----KRGEYVAAIPRFQLVLANY----SDAE 224 + + L E I + Y RG ++ + RF +A+Y Sbjct: 333 GIILCDNLGRFEEAITSFEKALEIKPDYYSAWHNRGVALSNLQRFNEDIASYDKALQLKP 392 Query: 225 HAEEAMARLVEAYVALALMDEA----REVVSLIQERYPQGYWA 263 +A L +DEA + + ++ +P+ W Sbjct: 393 DLHQAWYYRGNTLGNLRRLDEAIASYDKALQ-LKPDFPEA-WY 433 >gi|330509120|ref|YP_004385548.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6] gi|328929928|gb|AEB69730.1| TPR-repeat protein [Methanosaeta concilii GP-6] Length = 420 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 11/82 (13%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 K + + +A + +++ P + K ++ Y+ G+Y++A + Sbjct: 312 KGNALFQIGRYEEAIKAYDKAIALNPKDGSAWNGKGMV-----LYNMGRYEEAIEDYDRA 366 Query: 121 ITQYPES--KNVDYVYYLVGMS 140 I P + D Y +S Sbjct: 367 IKFAPFNVTPLAD--LYAKNLS 386 >gi|304407851|ref|ZP_07389502.1| glycosyl transferase family 2 [Paenibacillus curdlanolyticus YK9] gi|304343334|gb|EFM09177.1| glycosyl transferase family 2 [Paenibacillus curdlanolyticus YK9] Length = 513 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 36/117 (30%), Gaps = 14/117 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y + +A E+ G A L + AG+ + A + Sbjct: 214 YAAGTELFGAGRWLEAIEWLAPLAEGEGLGETCGFASDVRLKLSHAYRLAGQLEAAIAHA 273 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 E + +YP+ ++ +Y D + L+ + + + +PY Sbjct: 274 EAGVREYPDFPDMCEAL---AAAYMA------RDDAPS--ALRALEQAIAIGPAAPY 319 >gi|296127458|ref|YP_003634710.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] gi|296019274|gb|ADG72511.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] Length = 687 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 79/234 (33%), Gaps = 41/234 (17%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 Y +N+++A EYFN+ F +R +Y Y+ A Sbjct: 64 ANTYYNIGASKHNLKNYNEAIEYFNKTLELDSSFFDVYYSR------GVAEYHLKFYENA 117 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 S + + P +N YY+ + YA++ + K ++ ++ + Sbjct: 118 VSDFTKALEVNPNLQN---AYYIRALCYAKINKH--------KKAIEDFDTLLNSFDEIN 166 Query: 174 YVKGARFYVTVGRNQL---AAKEVEIGRYYLKRGEYV--------AAIPRFQLVLANYSD 222 Y+ ++ L A K+ +I YYL Y+ + + F + +Y Sbjct: 167 YIYYYYRGLSKFHLNLFEEAVKDFDIAAYYLPNEGYIYYDRALSYSKLNMFDKSIRDY-- 224 Query: 223 AEHAE------EAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETL 269 + E +A +Y + +A + +I+ P A Y L Sbjct: 225 TKAIEINKNEIDAYYNRASSYCEIEEYYKAIEDYNKVIELN-PDDDEAYYNRAL 277 >gi|300776635|ref|ZP_07086493.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] gi|300502145|gb|EFK33285.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] Length = 368 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 6/84 (7%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 R+ D Y YE A+ +++++++ A + +P +LL +A+ Sbjct: 61 RECEKKDPQDYTYP---YEIALAYIRKEDYKSAISLLEKIKD-YPNIDDYYFALLGNAYD 116 Query: 104 QYSAGKYQQAASLGEEYITQYPES 127 A +QA +E + +YP S Sbjct: 117 Y--ADNPEQAIKTYDEGLKKYPSS 138 >gi|223939519|ref|ZP_03631395.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514] gi|223891791|gb|EEF58276.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514] Length = 254 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 57/150 (38%), Gaps = 22/150 (14%) Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 + + + + P ++LL++ + AGK+++A + + ++ ++ +S +G+ Sbjct: 79 YLKVANEHPGTSAGGQALLLAGGALFEAGKFKEAQAQFDRFLGEHGDSALASQA--RIGV 136 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + + Q ++ N + A+ + R Sbjct: 137 AASLEA------QGEDAQAAAKYQALISSQPNDSVIPQAKS--------------ALARL 176 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 Y K+G+Y A+ +Q + ++ + EA Sbjct: 177 YEKQGKYADALRLYQELTKQGNNDSWSAEA 206 >gi|146293561|ref|YP_001183985.1| TPR repeat-containing protein [Shewanella putrefaciens CN-32] gi|145565251|gb|ABP76186.1| TPR repeat-containing protein [Shewanella putrefaciens CN-32] Length = 663 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 37/130 (28%), Gaps = 33/130 (25%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A+ + Q++S A + F QY AG Y+QA E+ Sbjct: 359 QQAMQAYQSQDYSNAAKQFESPQWR--------------GSAQYKAGDYEQALKTFEQ-- 402 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + Y G + Q+ + K Q + A+ Sbjct: 403 ------DSSAQGLYNQGNALMQLGK-----PDKAKERYQAALEQQPNFP------DAKAN 445 Query: 182 VTVGRNQLAA 191 + + L Sbjct: 446 LALAEKLLEE 455 >gi|109464191|ref|XP_226606.4| PREDICTED: tetratricopeptide repeat domain 37 [Rattus norvegicus] Length = 1471 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 10/133 (7%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVR-YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 A+ L LD ++D + + + L KA + +P Sbjct: 359 ALLKLSDCASLEEAVHILDQLSDTDNTPGLLVLQGLACLNTGAIDKATKIMEDLVASYP- 417 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 ++ L A+V ++ Y QA + + + + V +Y +G++Y M + Sbjct: 418 -DLSEAHALE-AYVHFTKKDYVQAETSFQRALE---KDAEVAEYHYQLGLTYWLMGEETR 472 Query: 150 YDQRATKLMLQYM 162 D+ L + Sbjct: 473 KDRT---KALNHF 482 >gi|78778008|ref|YP_394323.1| TPR repeat-containing protein [Sulfurimonas denitrificans DSM 1251] gi|78498548|gb|ABB45088.1| TPR repeat [Sulfurimonas denitrificans DSM 1251] Length = 788 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 46/128 (35%), Gaps = 8/128 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K +++N+ A + N +++P + + L + + ++Y Sbjct: 181 YIKIKKLYEDKNYEFALDLCNDVIKEYPTSLFRAELLFYKIRSHAKLNDNDKLVEVAKDY 240 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + Y +NV V L+ +Y ++ + + R+ + +S Y K Sbjct: 241 LRDYSSDENVAEVLSLIARAYNKIGLNSD--------AEYFYDRLFSEHYDSIYAKWGYI 292 Query: 181 YVTVGRNQ 188 Y+ + Sbjct: 293 YMAEVLEK 300 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 43/117 (36%), Gaps = 18/117 (15%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--VEIGRYYLKRGEYVAAI 210 + + L + +++ Y S + FY +L + VE+ + YL+ Sbjct: 191 KNYEFALDLCNDVIKEYPTSLFRAELLFYKIRSHAKLNDNDKLVEVAKDYLR-------- 242 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267 +YS E+ E ++ + AY + L +A + + +A++ Sbjct: 243 --------DYSSDENVAEVLSLIARAYNKIGLNSDAEYFYDRLFSEHYDSIYAKWGY 291 >gi|118395589|ref|XP_001030142.1| Ser/Thr protein phosphatase family protein [Tetrahymena thermophila] gi|89284434|gb|EAR82479.1| Ser/Thr protein phosphatase family protein [Tetrahymena thermophila SB210] Length = 479 Score = 39.7 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 42/147 (28%), Gaps = 18/147 (12%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D + E +K K + +A +++ + + A AF Q Sbjct: 2 DTEDFQQAEEFKQKGNDCFKHSKYQEASDFYTKAIDCHSTSPKAAPYYSNRAFCQLKLEN 61 Query: 110 YQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 Y A + I P +V YY G +Y + + + + ++ Sbjct: 62 YGLALEDSKTSIKLDPN-----FVKGYYREGSAYLALGK-----LEDARNSFKAAHKLQ- 110 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEV 194 P + + + KE Sbjct: 111 -----PKDTDINEKLKKLKQMIYEKEF 132 >gi|261286858|gb|ACX68652.1| Sgt1 [Saccharum hybrid cultivar] Length = 362 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 12/86 (13%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQA 113 ++ KA + +F A E + Q P A ++ G Y +A Sbjct: 3 AASDLESKAKEAFVDDDFELAAELYTQAIDAGPATADLYADRAQ-----AHIKLGNYTEA 57 Query: 114 ASLGEEYITQYPE-SKNVDYVYYLVG 138 + + I P K YY G Sbjct: 58 VADANKAIELDPTMHK----AYYRKG 79 >gi|157374762|ref|YP_001473362.1| TPR repeat-containing protein [Shewanella sediminis HAW-EB3] gi|157317136|gb|ABV36234.1| tetratricopeptide TPR_2 repeat protein [Shewanella sediminis HAW-EB3] Length = 644 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 49/156 (31%), Gaps = 35/156 (22%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 VC + S DV + ++ + + Q + A E F+ Sbjct: 323 VCAALVCIIYQPTPALASSWDDVWQTKN--QQGMEAYQAQEYQGASEKFSD--------- 371 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 + A Y AG Y +A +L E + ++ Y G + Q Sbjct: 372 --PQWQ---ASAHYKAGDYDEALALFE-------QDESAA-GLYNQGNALMQ-------- 410 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 Q ++ R V++ +K A+ + + + Sbjct: 411 QGKYDEAIKRYERAVKKNPE---LKDAQENLELAKK 443 >gi|13324602|gb|AAK18804.1|AF305612_1 LMP1 [Borrelia burgdorferi] Length = 1013 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK N+ A +N P + + A +G QA S E+ Sbjct: 842 LYLKASINLKNGNYQNAIPLYNLVIEKNPEN---ISAYINLAKAYEKSGNKTQAISTLEK 898 Query: 120 YI 121 I Sbjct: 899 II 900 Score = 38.9 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 32/109 (29%), Gaps = 31/109 (28%) Query: 69 KEQNFSKAYEYFNQ------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 ++N+ KA E F + + A +A L +EY Sbjct: 917 NQKNYQKAIEIFEKAIINSDIEAKY-----------NLATTLIEINDNTRAKDLLKEYTK 965 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 P + Y G+ + DQ + +++++ N Sbjct: 966 LKPNNPEALYAL---GIIEYNENNN---DQT--------LRELIKKFPN 1000 >gi|322823311|gb|EFZ29090.1| hypothetical protein TCSYLVIO_4663 [Trypanosoma cruzi] Length = 414 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 17/146 (11%), Positives = 42/146 (28%), Gaps = 23/146 (15%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CS---RDFPFAGVARK 95 + + ++ E+ K + + +A Y+ + + F A + Sbjct: 122 KAKQKFEMRNNPYQGMSAEEIKNKGNELMGMAKYKEAIAYYTKSIEMEPENHVF--FANR 179 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + Y A E I P Y Y+++ + Y ++ Sbjct: 180 AA-----AHTHLKDYDSAVIDCERAIAINPN--------YSKA--YSRLGTSLFYQEKYA 224 Query: 156 KLMLQYMSRIVERYT-NSPYVKGARF 180 + + ++ E N Y + + Sbjct: 225 R-AVDAFAKASELDPTNDRYKEDLKQ 249 >gi|307301551|ref|ZP_07581311.1| FecR protein [Sinorhizobium meliloti BL225C] gi|306903608|gb|EFN34196.1| FecR protein [Sinorhizobium meliloti BL225C] Length = 1202 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 28/93 (30%), Gaps = 3/93 (3%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 ++ R++ D + + + ++ KA E S P + + L Sbjct: 492 MAEAKREIDTALSVDPSFDVALVARGRYHMQNGEADKAVEDLLAGSTANP--AYS-NAQL 548 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 + A Y G AA + P V Sbjct: 549 LLAAAHYEKGDRIPAAQALDNADRLDPNDPVVA 581 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 12/100 (12%) Query: 101 AFVQYS---AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 A Y + A + E + P S ++ + +G+ ++ D RA + Sbjct: 412 ARAHYRYHIDNDLEGALADLERALKTAPGSSSI---WNSLGL-----VQGARGDNRAAEA 463 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + + S + A Y+ R A +E++ Sbjct: 464 AFKQAIALDPLDPVS-HANLAIQYMDEMRMAEAKREIDTA 502 >gi|224369656|ref|YP_002603820.1| TPR repeat family protein [Desulfobacterium autotrophicum HRM2] gi|223692373|gb|ACN15656.1| TPR repeat family protein [Desulfobacterium autotrophicum HRM2] Length = 263 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 42/142 (29%), Gaps = 20/142 (14%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + +E++ + V LK A + F + P K GK Sbjct: 34 QAKSPQELFNEGVEELKTGEPQAAVDLFTELIMTEPGNA---KVHKNRGVALMKLGKVDL 90 Query: 113 AASLGEEYITQYPESKNVDYVYY--LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A E +T P+ Y L Y + A + + +ER Sbjct: 91 AIQDFERALTLNPDLPG----LYSNLGAAWYYKQ---------AYEKAVINYGYEIEREP 137 Query: 171 NS--PYVKGARFYVTVGRNQLA 190 S Y A V + + +LA Sbjct: 138 ESYVSYFNRALCRVLLNQPKLA 159 >gi|167836683|ref|ZP_02463566.1| hypothetical protein Bpse38_09366 [Burkholderia thailandensis MSMB43] Length = 303 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 4/95 (4%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 L + I V +VG S + + T + ++ A L + + A F++ Sbjct: 10 VLALVLPILVGPMVGCTTGSFHTRSIAAQTGPQPAADL-RVAESALSAGDATLAATLFDK 68 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 P + + L Y G +A L Sbjct: 69 VLAADPNS---LPAQLGLGDAMYQNGDLARAGVLY 100 >gi|114591090|ref|XP_001160532.1| PREDICTED: leprecan-like 1 isoform 1 [Pan troglodytes] Length = 572 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P+ ++V L + Y + + D D A+ + Sbjct: 315 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSTDP-ASIEARED 368 Query: 162 MSRIVERY 169 ++ V+R+ Sbjct: 369 LTMFVKRH 376 >gi|324502334|gb|ADY41027.1| RNA polymerase-associated protein CTR9 [Ascaris suum] Length = 1143 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 52/143 (36%), Gaps = 20/143 (13%) Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKG------ARFY-VTVGRNQLAA-KE---- 193 R D+ + L S+ ++ + + + A+ + R+ A +E Sbjct: 632 RKREKDKDYRERALMMYSKALKVHPKNIWAANGIGCILAQKGAIQEARDIFAQVREATAD 691 Query: 194 -----VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYVALALMDEAR 247 V I Y+++ +YV+AI + + + + + A+ + AY +D+ R Sbjct: 692 FWDVWVNIAHIYMEQKQYVSAIQMYDNCMKKFR--RYNDVALMQYMARAYYKAGKLDDCR 749 Query: 248 EVVSLIQERYPQGYWARYVETLV 270 ++ P ++ V Sbjct: 750 HMLEKAMCEAPDNLMVKFNYAFV 772 >gi|284036695|ref|YP_003386625.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] gi|283815988|gb|ADB37826.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74] Length = 658 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 51/155 (32%), Gaps = 28/155 (18%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYS 106 + +E+Y +A+ E+ +A + Q + P F + + + Sbjct: 41 PPLLAQSAKAKELYAQAIKLFGERKAREAIPFMEQAIKQDPDFTD----AYIKLGQLYEF 96 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 +Y+ A S I P+S G +Y + + R + L ++ + Sbjct: 97 TRQYEPALSAYRNVIKLQPDSPAS-------GAAYQSLSNTLLRLGRYS-EALPFLEKYQ 148 Query: 167 ERY-TNSPYVKGAR-FYVTVGRNQLAAKEVEIGRY 199 + S A+ +T ++E R+ Sbjct: 149 TLFAPQS-----AQGKRIT--------HQLETARF 170 >gi|268318274|ref|YP_003291993.1| hypothetical protein Rmar_2735 [Rhodothermus marinus DSM 4252] gi|262335808|gb|ACY49605.1| hypothetical protein Rmar_2735 [Rhodothermus marinus DSM 4252] Length = 194 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 6/69 (8%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G+Y +A +L EE + +P+ V M+ ++ + M ++ Sbjct: 121 GRYTEAIALLEEALGLFPKHPMAAQVMLWWAMARYLKSGG------DSRQFREDMLELLR 174 Query: 168 RYTNSPYVK 176 RY +SP + Sbjct: 175 RYPDSPEAR 183 Score = 36.2 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 2/70 (2%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA--GKYQQAASLGEEY 120 +A + +++A + FP +A + +L A +Y G +Q E Sbjct: 113 RAKELVPRGRYTEAIALLEEALGLFPKHPMAAQVMLWWAMARYLKSGGDSRQFREDMLEL 172 Query: 121 ITQYPESKNV 130 + +YP+S Sbjct: 173 LRRYPDSPEA 182 >gi|209809313|ref|YP_002264851.1| hypothetical protein VSAL_II0523 [Aliivibrio salmonicida LFI1238] gi|208010875|emb|CAQ81277.1| putative membrane protein [Aliivibrio salmonicida LFI1238] Length = 619 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 10/68 (14%), Positives = 22/68 (32%), Gaps = 8/68 (11%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 K K ++ A E + +S A +G+ ++A E + Sbjct: 372 KGAAQYKAGDYKGAIESLSGLKD--------PQSQYNLANALAQSGQLEEAKEKYESLLN 423 Query: 123 QYPESKNV 130 P+ ++ Sbjct: 424 NNPDMEDA 431 >gi|170077497|ref|YP_001734135.1| hypothetical protein SYNPCC7002_A0875 [Synechococcus sp. PCC 7002] gi|169885166|gb|ACA98879.1| conserved hypothetical protein [Synechococcus sp. PCC 7002] Length = 167 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 9/72 (12%), Positives = 30/72 (41%), Gaps = 2/72 (2%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + ++E + + ++ +YF + + P++ + + L + + ++A Sbjct: 4 TTTQILFETGKDAFLQGEYRQSIDYFQRTVANLPPYSRESGEVQLWLVSAYQANNQGEKA 63 Query: 114 ASLGEEYITQYP 125 +L E + +P Sbjct: 64 IALCRE-LMTHP 74 >gi|118379176|ref|XP_001022755.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89304522|gb|EAS02510.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 1724 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 65/207 (31%), Gaps = 40/207 (19%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR---DFPFAGVARKSLLM 99 ++ V +E+ ++A + + K E + S +FP K M Sbjct: 480 EKEERKAKEARVIDCKELIKEAKQLFTNKEYQKCIEVLQKISSVSDNFP------KVNEM 533 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + G+ ++A+ + + P + + + +G + + + Sbjct: 534 LGYSYEQIGENEKASQHYMKALQLNPNDQTL---LFNLGNCLFNLEK--------YDEAI 582 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 + + ++ N PY A + Y ++ +Y +I +Q L Sbjct: 583 EKYNILIHLNQNKPY---AYENLAAC--------------YYEKKQYQESIQFYQKALEY 625 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEA 246 L +A+ + +EA Sbjct: 626 NKVDPLTN---YGLGKAFYSNNQYEEA 649 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 63/157 (40%), Gaps = 18/157 (11%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 + + V ++ + EKA + ++ A YFNQ ++ +++ A + Sbjct: 40 HNNPEDQVDLEQNILEKAQQLFNQNDYKTAQIYFNQIVQED---SKNVQAIQNLALCNFY 96 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y + L ++ I P+ +D +YY +G +Y DQ+ L Y+ + + Sbjct: 97 LKNYDEGILLMQKAIEMQPD--YIDKLYYYLGCAY--------CDQKHYMQGLVYLEKAM 146 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 + + A F + ++ ++I + Y K+ Sbjct: 147 T---QNQNNQDAIFMLGNTYQNISC--LQIAQNYYKK 178 >gi|15668437|ref|NP_247235.1| hypothetical protein MJ_0263 [Methanocaldococcus jannaschii DSM 2661] gi|3915922|sp|O06917|Y263_METJA RecName: Full=TPR repeat-containing protein MJ0263 gi|1499043|gb|AAB98249.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 320 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 35/236 (14%), Positives = 80/236 (33%), Gaps = 38/236 (16%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 L++ I + F+ G ++ + + S + KA+++++ F KA E ++ Sbjct: 80 LLSLGNLICLTFVKGEYERTLKYIEKLSRLSKPCYLSPFHKALIYIEFGEFEKALEALDE 139 Query: 83 CSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + +P + + +K+ ++ GK +A + ++ K+ + +YL G Sbjct: 140 FLKIYPNLTSILRQKASILEI-----LGKLDEALDCVNKILSI---KKDDAHAWYLKGRI 191 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 ++ K L + + + +A E+ Sbjct: 192 LKKL--------GNIKEALDALKMAINL----------NENLVHVYKDIAYLELA----- 228 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 Y A+ L + + EA L Y L +D+A ++ I Sbjct: 229 --NNNYEEALNYITKYLEKFPN---DVEAKFYLALIYENLNKVDDALKIYDKIISN 279 >gi|148264976|ref|YP_001231682.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4] gi|146398476|gb|ABQ27109.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4] Length = 248 Score = 39.7 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 47/157 (29%), Gaps = 42/157 (26%) Query: 62 EKAVLFLKEQNFSKAYEYFNQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 V +L+ + + A + F A + + + G YQQA S+ Sbjct: 102 NLGVNYLEMKRWDDAIQQLKIVTEDIFYQNQDA--ATINLGLAYFGKGDYQQALSVFRSA 159 Query: 121 ITQYPESKNV-----------------------------DYV--YYLVGMSYAQMIRDVP 149 + YP + DY YY +G++Y ++ + Sbjct: 160 LVSYPRDPRLRMSLGRVYFALDKIEMAIGEYKRAAEIQKDYANAYYYLGLAYLKIKDNS- 218 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + +V +S +R Y+ + + Sbjct: 219 -------AAVTAFKDVVRIAPDSEIGLLSREYLDMLK 248 >gi|282890887|ref|ZP_06299404.1| conserved hypothetical protein [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499241|gb|EFB41543.1| conserved hypothetical protein [Parachlamydia acanthamoebae str. Hall's coccus] Length = 328 Score = 39.7 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 46/129 (35%), Gaps = 28/129 (21%) Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 L+G ++A+ I + R + +S + + + E E Sbjct: 74 LIGQTFAREID--------LYRAITSFKRALILLPDSKF----ERRLQI--------EYE 113 Query: 196 IGRYYLKRGEYVAAIPRFQ-----LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 I Y +YV AI F+ V A + E + L E Y L ++A ++ Sbjct: 114 IVLCYYFGQKYVEAIEAFEDSRLFQVTAEFP---AFNELVLVLYECYEKLGQPEKACAIL 170 Query: 251 SLIQERYPQ 259 +Q+ PQ Sbjct: 171 ETLQQCNPQ 179 >gi|238592086|ref|XP_002392802.1| hypothetical protein MPER_07575 [Moniliophthora perniciosa FA553] gi|215459356|gb|EEB93732.1| hypothetical protein MPER_07575 [Moniliophthora perniciosa FA553] Length = 359 Score = 39.7 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 40/115 (34%), Gaps = 22/115 (19%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 Y + + F A E + + F F+ + A QY + + A Sbjct: 225 PDIYYHRGQVLFIMNQFKDAAENYTKSTELDDQFVFSH------IQLAVAQYKSDQLASA 278 Query: 114 ASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 + + +P+ S+ ++Y Y +++ DQ+ ++ R +E Sbjct: 279 MAQFRRTMKAFPQRSEPLNY--------YGELL----LDQQRFPDAIEKFDRAIE 321 >gi|182416089|ref|YP_001821155.1| TPR repeat-containing protein [Opitutus terrae PB90-1] gi|177843303|gb|ACB77555.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1] Length = 715 Score = 39.7 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 26/194 (13%), Positives = 55/194 (28%), Gaps = 41/194 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 L ++A +F + + A + ++A E Sbjct: 552 NLGTALLTLDRAAEAIAHFERAVQLDPRYTMAHY------NLGLALAQTDRVREAIPHFE 605 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +T P + + +S A + +++ R +E +S Sbjct: 606 RVVTLQPTHAHAE-------LSLAYALASTDR----FSESIRHFERALELEPDSVEAHQT 654 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE----AMARLV 234 + LA G+ A+P F+ V+ + A A+ +L Sbjct: 655 YARM------LARH-----------GQLDQALPHFRAVVELMPQSGAAHRDLGFALRQLG 697 Query: 235 EAYVALALMDEARE 248 + A+ EA+ Sbjct: 698 RSDEAMPHFLEAQR 711 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D RY Y + + +A +F + P A L A+ S ++ + Sbjct: 577 DPRYTMAHYNLGLALAQTDRVREAIPHFERVVTLQPTHAHAE---LSLAYALASTDRFSE 633 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMI-RDVPYDQRATKLMLQYMSRIVERYTN 171 + E + P+S +YA+M+ R DQ L + +VE Sbjct: 634 SIRHFERALELEPDSVEAHQ-------TYARMLARHGQLDQ-----ALPHFRAVVELMPQ 681 Query: 172 S 172 S Sbjct: 682 S 682 >gi|218246665|ref|YP_002372036.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801] gi|257059707|ref|YP_003137595.1| hypothetical protein Cyan8802_1863 [Cyanothece sp. PCC 8802] gi|218167143|gb|ACK65880.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801] gi|256589873|gb|ACV00760.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802] Length = 344 Score = 39.7 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 74/229 (32%), Gaps = 25/229 (10%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 S+ + VT + + A+ ++E + +A F + P +++ L Sbjct: 2 SNFTPKIKRVTKPTDKSGLARMALQLVQENRYDEALLAFQEILEQDPN---TKQAHLGIG 58 Query: 102 FVQYSAGKYQQAASLGEEYITQYP----ESKNVDYVYY---LVGMSYAQMIRDVPYDQRA 154 + YQ A + + P S + YY + +S V D Sbjct: 59 RIYLKQKDYQGALTHFQTARNLDPMMVQASLAIGNAYYELKQLELSMQAFQDAVNIDPSD 118 Query: 155 TKLMLQYMSRIV--ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 L ++ ++Y K V QL + + + Y ++G+ AI Sbjct: 119 ATGYLGIGRVLIKQKQYPQ---AKEQLQKALVLNPQLILARLLMAQIYQEQGDIDQAITE 175 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + VL L AY L + +E +L ++ + Q Sbjct: 176 IESVLKLNPT----------LSNAYQGLGNLYLKQEKYALARKNFEQAQ 214 >gi|187918083|ref|YP_001883646.1| surface-located membrane protein 1 [Borrelia hermsii DAH] gi|119860931|gb|AAX16726.1| surface-located membrane protein 1 [Borrelia hermsii DAH] Length = 784 Score = 39.7 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 82/262 (31%), Gaps = 60/262 (22%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + + + ++Y V+ + Y+ ++ K + + +A + F + P +K+ Sbjct: 422 DFKKAEEIYEKIVSITNNAEDHYKVGIIKFKLKKYEEAIKAFGKTISLNPKH---KKAYT 478 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS------------YAQMIR 146 + K +QA ++ IT KN D YY G++ + Sbjct: 479 NKGTSLILSNKPKQAIEAFKKAITI---DKNYDNAYYKKGIAEEQNDDKQNAFLSFKKAY 535 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSP-YVKGARFYVTVGRNQLAAKEVEIGRY------ 199 + + + + + NS Y+ AR + + + + I ++ Sbjct: 536 GITKNPHYALKAGIIANH-IGDFKNSEKYLDKARASIKEKNDIML-YNLAIAKFENNNLN 593 Query: 200 --------------------------YLKRGEYVAAIPRFQLVLANYSD--AEHAEEAMA 231 YL + Y AIP + V+ D H Sbjct: 594 ESLKTINQALVINPKKPEYLYLKASIYLTKENYNEAIPLYNAVILKNPDNITAHIN---- 649 Query: 232 RLVEAYVALALMDEAREVVSLI 253 L AY +A E++ I Sbjct: 650 -LARAYEKSGNELKAIEILEKI 670 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 35/103 (33%), Gaps = 19/103 (18%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 ++N+ KA + F + + ++ A + ++A +EYI P + Sbjct: 688 NQKNYQKAIKIFQKAEALS-----SLEAKYNLATTFLALKDNKRAMEKLKEYIKINPNNP 742 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + +G D D + + ++ ++ N Sbjct: 743 E---ALHALGTIEYN---DNGSD--------KILKEVINKFPN 771 >gi|149743443|ref|XP_001488681.1| PREDICTED: similar to UPF0530 protein [Equus caballus] Length = 469 Score = 39.7 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 46/147 (31%), Gaps = 29/147 (19%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYEYFN 81 LVG D LD + +++ AV + NF KA E + Sbjct: 73 GLLLVGTGSSVRLDKELDLAVKTMVEIAKTQPLTQREQLHVSAVETFAKGNFPKASELWE 132 Query: 82 QCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYY 135 Q RD P M A + G +Q YP + N+ Y Sbjct: 133 QILRDHPTD--------MLALKFSHDTYFYLGHQEQMRDSVAR---VYPFWTPNIPLSSY 181 Query: 136 LVGMSYAQMIRDVPYDQ--RATKLMLQ 160 + G+ ++ YDQ + K L Sbjct: 182 VKGIYSFGLMETNFYDQAEKLAKEALS 208 >gi|119510182|ref|ZP_01629320.1| hypothetical protein N9414_10368 [Nodularia spumigena CCY9414] gi|119465132|gb|EAW46031.1| hypothetical protein N9414_10368 [Nodularia spumigena CCY9414] Length = 304 Score = 39.7 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 49/151 (32%), Gaps = 15/151 (9%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 F ++ L G Q + D ++ D + Y ++ ++Q++ +A F + Sbjct: 113 AFANLGGALLEGSNLQQASDYLERAIELDPKLGFAHYNLGLVRQQQQDWERAIASFKKAM 172 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 ++ A + GK QA + I P+ +Y +GM + Sbjct: 173 E---YSKNAPEPPYHLGTSYLQQGKVNQARDAFFQAIKNNPQYPE---AHYNLGMIWFN- 225 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 Q K L + E N P Sbjct: 226 -------QGQLKEALAAFRKSAEANPNYPNA 249 >gi|84388532|ref|ZP_00991079.1| hypothetical protein V12B01_07046 [Vibrio splendidus 12B01] gi|84377081|gb|EAP93952.1| hypothetical protein V12B01_07046 [Vibrio splendidus 12B01] Length = 262 Score = 39.7 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 47/127 (37%), Gaps = 15/127 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ QR + + + + +S + + +++ G+ Y Sbjct: 149 YQNAVDMILKQRDYTGAIAAFQKFQKDFPDSTFTPNSHYWL--------------GQLYF 194 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A+ F V+ +Y D+ +A+ +L + +A++ + YP Sbjct: 195 AKKQDKEAVKSFAAVV-SYKDSNKRADALVKLGDIAARNNNAAQAKKYYQQVVTEYPNSA 253 Query: 262 WARYVET 268 A+ +T Sbjct: 254 SAKVAKT 260 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 55/150 (36%), Gaps = 23/150 (15%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + S+D TDV ++ Y+ AV LK+++++ A F + +DFP + S Sbjct: 129 SEGSKDASGTFSTDVD-EQTAYQNAVDMILKQRDYTGAIAAFQKFQKDFPDSTFTPNSHY 187 Query: 99 MSAFVQY-SAGKYQ-----QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + + + A ++ +K D + + D+ Sbjct: 188 WLGQLYFAKKQDKEAVKSFAAVVSYKD------SNKRAD------ALV---KLGDIAARN 232 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYV 182 +Y ++V Y NS K A+ ++ Sbjct: 233 NNAAQAKKYYQQVVTEYPNSASAKVAKTHL 262 >gi|118579010|ref|YP_900260.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM 2379] gi|118501720|gb|ABK98202.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM 2379] Length = 334 Score = 39.7 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 25/97 (25%), Gaps = 43/97 (44%) Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I +P + N DY + L R++ Y S Y + + Sbjct: 100 IHSHPRNGNKDY-----------------------QKALDCFQRLIREYPASEYRRDSER 136 Query: 181 --------------------YVTVGRNQLAAKEVEIG 197 + R + A KE EI Sbjct: 137 MIFSIANVAIKDGTIADQQTRIDALRKEAADKESEIA 173 >gi|325286055|ref|YP_004261845.1| hypothetical protein Celly_1146 [Cellulophaga lytica DSM 7489] gi|324321509|gb|ADY28974.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga lytica DSM 7489] Length = 250 Score = 39.7 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 10/85 (11%), Positives = 23/85 (27%), Gaps = 9/85 (10%) Query: 57 QREVYEKAVLFLKEQNFSKAYE-YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++++KA + A + Y + + Y K + Sbjct: 20 NNDLFKKATDAYNNGKYDAAIKDYLQIIDN----GKHSAELYYNLGNSYYKLNKVAPSIY 75 Query: 116 LGEEYITQYPESK----NVDYVYYL 136 E+ + P N+ Y + Sbjct: 76 YYEKALLLKPNDSEIKNNLAYAKNM 100 >gi|317486159|ref|ZP_07945002.1| N-acetylmuramoyl-L-alanine amidase [Bilophila wadsworthia 3_1_6] gi|316922586|gb|EFV43829.1| N-acetylmuramoyl-L-alanine amidase [Bilophila wadsworthia 3_1_6] Length = 537 Score = 39.7 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 10/77 (12%) Query: 112 QAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 A + Y+ YP+S D Y ++ + D+ + +LQ +I+++ Sbjct: 220 DARRSVDRYLQLVRLYPKSSLADDSLYRAA----RLRGQILRDKAGAQELLQ---QILKK 272 Query: 169 YTNSPYVKGARFYVTVG 185 Y +S K A Y+ Sbjct: 273 YPSSNTAKDASSYLATL 289 Score = 35.9 bits (82), Expect = 6.0, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 13/82 (15%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + + + ++V Y S + + R Q+ L+ A Sbjct: 219 KDARRSVDRYLQLVRLYPKSSLADDSLYRAARLRGQI-----------LRDKA--GAQEL 265 Query: 213 FQLVLANYSDAEHAEEAMARLV 234 Q +L Y + A++A + L Sbjct: 266 LQQILKKYPSSNTAKDASSYLA 287 >gi|300863751|ref|ZP_07108682.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506] gi|300338258|emb|CBN53828.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506] Length = 272 Score = 39.7 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 74/221 (33%), Gaps = 23/221 (10%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 +L +LT+ IA+ +L + ++ E+ +KA + +F K Sbjct: 1 MIRLILTSLTVTLVIAITWLGNLTHAIALSSTPEAANPQEELGELVQKAFAATNKGDFIK 60 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 A ++ Q FP +A + + S K ++A E+ P++ + Y Sbjct: 61 AESFWTQIVEKFP--EIAP-AWSNRGNSRVSQNKLEEALLDYEKASELAPDAPD-PY--- 113 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 ++ + + + +R++E P A L ++ Sbjct: 114 ---LNRGTALEGLGR----WSEAIASYNRVLELDPEDP---AAYNNRGNAEAGLGEWDLA 163 Query: 196 IGRYYLKRGEYVA---AIPRFQLVLANYSDAEHAEEAMARL 233 I Y ++ +A A R L Y EA+ + Sbjct: 164 IADY--RKAADLAPEYAFARANYALTLYQ-TGETAEAITTM 201 >gi|150024185|ref|YP_001295011.1| hypothetical protein FP0071 [Flavobacterium psychrophilum JIP02/86] gi|149770726|emb|CAL42190.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86] Length = 592 Score = 39.7 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA-LALMDEAREVVSL 252 + IG+ Y K+ ++ A+ +Q ++ +++ + +EA+ E Y L + +A+ Sbjct: 506 LRIGKLYEKQNNFIQALNYYQQIIDQHANGIYIDEALFFTAEIYRKQLPDIAKAKTYYEK 565 Query: 253 IQERYPQGYWA 263 I + + Sbjct: 566 IIFAHQDSIYF 576 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 41/119 (34%), Gaps = 8/119 (6%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 + +N ++A + F + +LL + + QA + ++ I Q+ Sbjct: 477 YQNKN-TEALQAFETILLQHKGEKIEDITLLRIGKLYEKQNNFIQALNYYQQIIDQHANG 535 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 +D + Y + + D+ Y +I+ + +S Y AR R Sbjct: 536 IYIDEALFFTAEIYRKQLPDIA-------KAKTYYEKIIFAHQDSIYFVEARNNYRKLR 587 >gi|115378635|ref|ZP_01465786.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|310820610|ref|YP_003952968.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115364347|gb|EAU63431.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|309393682|gb|ADO71141.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 433 Score = 39.7 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 51/179 (28%), Gaps = 26/179 (14%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA----VLFLKEQNFSKAYEYF- 80 I +AV L +S + + ++ E A ++ N++ A Sbjct: 6 ILIVLAVALLGAVTPSASAQAGFERGEKALAENQLGEAAVAYRQALMESPNWAPALNGLG 65 Query: 81 -------NQCSRDFPFAGVAR------KSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 F + + AG + A E Y PE Sbjct: 66 STLFKQGQTIEATALFRSATEADPEFKLAWFNLGYAARKAGDFATAVRAYERYTQLAPED 125 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + +Y +G SY Q + + +R + +V+ AR +V R Sbjct: 126 PDG---HYGLGESYRQQGQGAK-----ALAAYETYLEKEKRPSEQKWVEQAREHVAALR 176 >gi|29348871|ref|NP_812374.1| TPR domain-containing protein [Bacteroides thetaiotaomicron VPI-5482] gi|29340777|gb|AAO78568.1| TPR domain protein [Bacteroides thetaiotaomicron VPI-5482] Length = 584 Score = 39.7 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 64/199 (32%), Gaps = 38/199 (19%) Query: 61 YEKAVLFL--KEQNFSKAYEYFNQCSRDFPFAGVARK-SLLMSAFVQYSAGKYQQAASLG 117 Y + + L ++ KA Q FP A++ L + KY + S Sbjct: 116 YSQGLASLYQQQNELDKAITLLEQMVVRFP----AKQDPLFNLLDLYGRQEKYDKVISTL 171 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 +++ + + + Y QM D K Q + +V+ Y Sbjct: 172 NRLEKHMGKNEQLSMEKFRI---YLQMKDD--------KKAFQEIESLVQEYP------- 213 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 + + +V +G YL+ G+ A +Q VLA D A+ + Y Sbjct: 214 ----MDM------RYQVILGDVYLQNGKKQEAYDVYQKVLAAEPD---NPMAIFSMASYY 260 Query: 238 VALALMDEAREVVSLIQER 256 + ++ + + Sbjct: 261 KQTGQEELYQQQLDTLLLN 279 >gi|58263450|ref|XP_569135.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|134108368|ref|XP_777135.1| hypothetical protein CNBB3670 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259820|gb|EAL22488.1| hypothetical protein CNBB3670 [Cryptococcus neoformans var. neoformans B-3501A] gi|57223785|gb|AAW41828.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21] Length = 313 Score = 39.7 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 35/120 (29%), Gaps = 26/120 (21%) Query: 39 ERQSSRDVYLDSVTDVRYQR--EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 R + +R ++Y + + F A + + + A ++ Sbjct: 8 ASTPKRKPFTPKPPRPAEERLPKLYRALTDQVDDGYFENAIKTCKKILTLDASSRTAFQT 67 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV-----DYVYY-----------LVGMS 140 LL F+ Y A SL + +P + Y Y L G+S Sbjct: 68 LL---FLHLQTDDYTSALSLLD-----HPSHEESLGFERAYCLYRLHREKEALEVLKGLS 119 >gi|301166057|emb|CBW25631.1| putative lipoprotein [Bacteriovorax marinus SJ] Length = 255 Score = 39.7 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 36/82 (43%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + + R R ++ + +N + A YF++ +FP + LL + Sbjct: 164 NKIKGKRRARILHNLGMSAYINKNNNDATVYFSKLFTEFPSSNYNANGLLYLSKTLQRLK 223 Query: 109 KYQQAASLGEEYITQYPESKNV 130 K +QA EE I ++P+SK V Sbjct: 224 KNEQAKQTLEELIKRFPKSKKV 245 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 8/62 (12%), Positives = 27/62 (43%) Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 A F + + + + + L + L ++A++ + + +R+P+ + ++ Sbjct: 191 ATVYFSKLFTEFPSSNYNANGLLYLSKTLQRLKKNEQAKQTLEELIKRFPKSKKVKEAKS 250 Query: 269 LV 270 L+ Sbjct: 251 LL 252 Score = 36.6 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 50/136 (36%), Gaps = 29/136 (21%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--RKSLL-----MSAFVQYSAGKYQQA 113 Y++A+ N+ +A + + + R++ + MSA++ + A Sbjct: 138 YQEAMGAYTSGNYKRAQSLLSGLEAE---NKIKGKRRARILHNLGMSAYINKNNND---A 191 Query: 114 ASLGEEYITQYPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + + E + +Y + YL + + ++ + Q + +++R+ Sbjct: 192 TVY---FSKLFTEFPSSNYNANGLLYL--------SKTLQRLKKN-EQAKQTLEELIKRF 239 Query: 170 TNSPYVKGARFYVTVG 185 S VK A+ + Sbjct: 240 PKSKKVKEAKSLLAKL 255 >gi|266619147|ref|ZP_06112082.1| putative tetratricopeptide repeat-containing domain protein [Clostridium hathewayi DSM 13479] gi|288869338|gb|EFD01637.1| putative tetratricopeptide repeat-containing domain protein [Clostridium hathewayi DSM 13479] Length = 560 Score = 39.7 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 62/198 (31%), Gaps = 41/198 (20%) Query: 71 QNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLG-------EEYI 121 ++ KA E + + + FP + L + G+Y++A + Y Sbjct: 295 GDYRKAIECYEKDLKLFPEYMSFWKEIGQL---YAY--LGEYEKAEEAYGHTTKMDDYYS 349 Query: 122 TQ-----YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 Y ++ +Y G+ A + Q ++ Y Sbjct: 350 RMGDLWFYQGNEKKALRFYKTGIENAAADKKAER-QSDLGEAY---MDQMQNYP------ 399 Query: 177 GARFYVTVGRNQ------LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 A ++ + L E + R Y + G+Y A + L ++ +E E Sbjct: 400 KAVVWLKRAIGRTTDHGDLFDYERYLARAYYRMGKYGPAREHAKAALEHFKLSEEGTE-- 457 Query: 231 ARLVEAYVALALMDEARE 248 E Y+A ARE Sbjct: 458 ----EDYLAYGPYKPARE 471 >gi|295673993|ref|XP_002797542.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226280192|gb|EEH35758.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 830 Score = 39.7 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 22/143 (15%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108 D + Y ++ + + KAYE + Q P + Y Sbjct: 171 ADNGDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 224 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y+ A I P + V+Y +G + + + D L R E Sbjct: 225 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQTND------ALDAYRRAAEL 274 Query: 169 YTNSPYVKGARFYVTVGRNQLAA 191 + ++ + + + ++ A Sbjct: 275 DPTNVHI---KARLQLLQSGQAG 294 >gi|166712749|ref|ZP_02243956.1| hypothetical protein Xoryp_15180 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 266 Score = 39.7 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 19/130 (14%) Query: 64 AVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A L + ++++A E++ + +L A Q+ G+ QQA + I Sbjct: 95 AETLLAQGDYAQAAEHYQGALRGLYSDDPH---LMLGLAKAQFGLGQPQQARQTLDALIA 151 Query: 123 QYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P ++ D ++ Y + D T+ L + + + Y + AR Sbjct: 152 ANPSFRSHDGHLLYARAV----------EDSGDTEAALHEYATLAQGYP----GEEARVR 197 Query: 182 VTVGRNQLAA 191 + A Sbjct: 198 YAQLLQRTAR 207 >gi|15804991|ref|NP_290110.1| cellulose synthase subunit BcsC [Escherichia coli O157:H7 EDL933] Length = 1154 Score = 39.7 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 440 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 496 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 497 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 553 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + + +V R S V + G+ A ++ + Sbjct: 554 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 607 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + L+R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 608 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 660 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 353 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 409 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 410 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 455 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 456 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 504 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 505 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 534 >gi|299538577|ref|ZP_07051860.1| hypothetical protein BFZC1_21303 [Lysinibacillus fusiformis ZC1] gi|298726164|gb|EFI66756.1| hypothetical protein BFZC1_21303 [Lysinibacillus fusiformis ZC1] Length = 422 Score = 39.7 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 7/86 (8%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVA 93 G +++ D Y+ ++ D ++ A + Q + A + + P F+ Sbjct: 185 AGAAYETAFDYYVKALEDEVKPDILFGAAYSAFQSQKYEMAIKQLEELKELDPDYFSAY- 243 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEE 119 L+ A Q+A + +E Sbjct: 244 ----LLLAESYAMTEDNQKAYAAIQE 265 >gi|294494031|gb|ADE92787.1| cellulose synthase operon protein C [Escherichia coli IHE3034] Length = 1140 Score = 39.7 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 426 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 482 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 483 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 539 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198 Q + +V R N ++ A G+ A ++ + Sbjct: 540 RGQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 594 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 595 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 646 >gi|261253449|ref|ZP_05946022.1| hypothetical protein VIA_003474 [Vibrio orientalis CIP 102891] gi|260936840|gb|EEX92829.1| hypothetical protein VIA_003474 [Vibrio orientalis CIP 102891] Length = 389 Score = 39.7 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 55/192 (28%), Gaps = 48/192 (25%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A ++ +A + F Q + P A L++ + ++ +A Sbjct: 114 AKDYMASGFLDRAEKIFEQLVDE-PDHREAALQQLVAIY--QQTREWSKAIH-------- 162 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPY------DQRATK----LMLQYMSRIVERYTNSP 173 Y LV M +M + + Q + Q + + Sbjct: 163 --------YASLLVKMGRKRMRTSIGHFWCELAMQEQAEGNHTQARQNFKKALTEDPRCV 214 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 A G+ YL+ +Y I + VL D++ E + L Sbjct: 215 RASIAL-----------------GKLYLEDEDYKRTIAYLEAVLE--QDSDFVSEVLPTL 255 Query: 234 VEAYVALALMDE 245 E Y L DE Sbjct: 256 AECYHHLGQEDE 267 >gi|242310689|ref|ZP_04809844.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239523087|gb|EEQ62953.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 318 Score = 39.7 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 17/141 (12%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 +S+ + +S + E + + L+E+ + A EY A K Sbjct: 185 ESAENNQKESKQPEKSLAEFFAEGEKLLEEKKYKLADEYLQT----------AIKGYYKP 234 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESK-NVDYVYYL--VGMSYAQMIRDVPYDQRATKL 157 A Y G+ A EE I Y S D Y+ + ++ A+ + + Sbjct: 235 ARGNYLLGEIAFAQGRYEEAIYYYKTSATRYDKADYMPRLMLNSAKSFEKIN----DKEN 290 Query: 158 MLQYMSRIVERYTNSPYVKGA 178 +++ ++ Y +S K A Sbjct: 291 AKKFLESLIALYPDSNEAKEA 311 >gi|254454611|ref|ZP_05068048.1| TPR protein [Octadecabacter antarcticus 238] gi|198269017|gb|EDY93287.1| TPR protein [Octadecabacter antarcticus 238] Length = 190 Score = 39.7 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 37/135 (27%), Gaps = 21/135 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117 +Y + + A E+F P FA ++ Y G Y A Sbjct: 73 LYRRGEDAMGAGTPDVAVEHFTALVDHAPDFAEGYNGRAS-----AYYQMGLYGPAIDDL 127 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + + P + G++ + ++ Q ++ +V Sbjct: 128 RQVLVLEPRHFGA-----MTGVAVM--LEEIGR-PEDALEAWQRIASLVPTDP------E 173 Query: 178 ARFYVTVGRNQLAAK 192 + + QL K Sbjct: 174 VASMIDRLKIQLQGK 188 >gi|254422317|ref|ZP_05036035.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC 7335] gi|196189806|gb|EDX84770.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC 7335] Length = 987 Score = 39.7 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 16/117 (13%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + + + + +A F + +R F K+ +V G+ A ++ I Sbjct: 867 NRGLALTELERYEEAVASFEKATR---FNPKLAKAWDNRGYVLMRLGRDLDALKSFDKAI 923 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 P YY + YA QR L L+ + + V + Y + A Sbjct: 924 AVNPNYAK---AYYNRALCYAL--------QRDNDLALENLQQAVRLEPS--YKQEA 967 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 54/172 (31%), Gaps = 33/172 (19%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP------F 89 +G + + + E E+ L + + A +++ P F Sbjct: 671 LGELTEKINRLEDNRPELFLTADEFIEEGDQQLANKQYEAALSAYDRALDVQPSNAELWF 730 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + K LL + ++A + +E P +Y G + Sbjct: 731 SR--SKVLLEL-------DRKEEALAALDEVTKLTPSRIE---AWYQKG--------RLL 770 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT--VGRNQLAAKEVEIGRY 199 + R + L+ + +E+ AR ++ + ++L +E I + Sbjct: 771 RELRQYQSALEAFEQAIEQDP-----IDARVWLNKGMTLSRLRKREEAIAAF 817 >gi|162905561|emb|CAP58852.1| novel protein [Homo sapiens] Length = 263 Score = 39.7 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 44/148 (29%), Gaps = 29/148 (19%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYE 78 L+G D LD + +++ AV NF KA E Sbjct: 70 MATGLVLIGTGSSVKLDKELDLAVKTMVEISRTQPLTRREQLHVSAVETFANGNFPKACE 129 Query: 79 YFNQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDY 132 + Q +D P M A + G +Q YP + ++ Sbjct: 130 LWEQILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPL 178 Query: 133 VYYLVGMSYAQMIRDVPYDQ--RATKLM 158 Y+ G+ ++ YDQ + K Sbjct: 179 SSYVKGIYSFGLMETNFYDQAEKLAKEA 206 >gi|91213036|ref|YP_543022.1| cellulose synthase subunit BcsC [Escherichia coli UTI89] gi|117625813|ref|YP_859136.1| cellulose synthase subunit BcsC [Escherichia coli APEC O1] gi|218560606|ref|YP_002393519.1| cellulose synthase subunit BcsC [Escherichia coli S88] gi|218691814|ref|YP_002400026.1| cellulose synthase subunit BcsC [Escherichia coli ED1a] gi|237703300|ref|ZP_04533781.1| cellulose synthase subunit BcsC [Escherichia sp. 3_2_53FAA] gi|91074610|gb|ABE09491.1| cellulose synthase operon protein C [Escherichia coli UTI89] gi|115514937|gb|ABJ03012.1| cellulose synthase operon protein C [Escherichia coli APEC O1] gi|218367375|emb|CAR05154.1| cellulose synthase subunit [Escherichia coli S88] gi|218429378|emb|CAR10196.1| cellulose synthase subunit [Escherichia coli ED1a] gi|222035240|emb|CAP77985.1| Cellulose synthase operon protein C [Escherichia coli LF82] gi|226902564|gb|EEH88823.1| cellulose synthase subunit BcsC [Escherichia sp. 3_2_53FAA] gi|307628609|gb|ADN72913.1| cellulose synthase subunit BcsC [Escherichia coli UM146] gi|312948089|gb|ADR28916.1| cellulose synthase subunit BcsC [Escherichia coli O83:H1 str. NRG 857C] gi|315286199|gb|EFU45635.1| tetratricopeptide repeat protein [Escherichia coli MS 110-3] gi|323949771|gb|EGB45655.1| cellulose synthase operon protein C [Escherichia coli H252] gi|323954928|gb|EGB50708.1| cellulose synthase operon protein C [Escherichia coli H263] Length = 1157 Score = 39.7 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198 Q + +V R N ++ A G+ A ++ + Sbjct: 557 RGQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 611 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663 >gi|71398866|ref|XP_802661.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70864444|gb|EAN81215.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 407 Score = 39.7 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 17/146 (11%), Positives = 42/146 (28%), Gaps = 23/146 (15%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CS---RDFPFAGVARK 95 + + ++ E+ K + + +A Y+ + + F A + Sbjct: 122 KAKQKFEMRNNPYQGMSAEEIKNKGNELMGMAKYKEAIAYYTKSIEMEPENHVF--FANR 179 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + Y A E I P Y Y+++ + Y ++ Sbjct: 180 AA-----AHTHLKDYDSAVIDCERAIAINPN--------YSKA--YSRLGTSLFYQEKYA 224 Query: 156 KLMLQYMSRIVERYT-NSPYVKGARF 180 + + ++ E N Y + + Sbjct: 225 R-AVDAFAKASELDPTNDRYKEDLKQ 249 >gi|195473571|ref|XP_002089066.1| GE26218 [Drosophila yakuba] gi|194175167|gb|EDW88778.1| GE26218 [Drosophila yakuba] Length = 1135 Score = 39.7 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 37/98 (37%), Gaps = 14/98 (14%) Query: 109 KYQQAASLGEEYITQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y +A S ++Y+ + ++ + Y +G++Y ++ R K ++ ++ Sbjct: 128 EYTEALSAYQKYLRFRENNYWTNHAFIYGIGVAYFKL--------RCFKWAIKSFQELLY 179 Query: 168 RYTNSPYVKGARFYVTVGRN-----QLAAKEVEIGRYY 200 N + + +A K +++ Y Sbjct: 180 LSPNFTCANEVHLRLGLMLKHCGEFHIAQKHLQLALLY 217 >gi|147903419|ref|NP_001084950.1| WD and tetratricopeptide repeats 1 [Xenopus laevis] gi|47122830|gb|AAH70541.1| MGC78868 protein [Xenopus laevis] Length = 671 Score = 39.7 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 14/115 (12%), Positives = 37/115 (32%), Gaps = 21/115 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYS---AGKYQQAASL 116 +KA +Q +S+A E +++ + P R ++L A G + A Sbjct: 358 QKANDAFAQQQWSQAIELYSEAVQRAP-----RSAMLYGNRAAAYMKRKWDGDHYDALRD 412 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + + P ++ + ++ L+ + ++ + Sbjct: 413 CLQALALNPAHLK---AHFRLARCLFELH--------YVSEALECLEEFKVKFPD 456 >gi|323345304|ref|ZP_08085527.1| hypothetical protein HMPREF0663_12063 [Prevotella oralis ATCC 33269] gi|323093418|gb|EFZ35996.1| hypothetical protein HMPREF0663_12063 [Prevotella oralis ATCC 33269] Length = 225 Score = 39.3 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 78/211 (36%), Gaps = 30/211 (14%) Query: 19 LYKFALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQRE----VYEKAVLFLKEQNF 73 ++K L +FF + A+C RD ++ + Y + +KA ++ Q + Sbjct: 1 MFKKILFLFFGLIAICKSYAQSTNPIRDSLSVAMEQLAYHPDSIDLCLKKAGWNIQLQQW 60 Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A E +++ + P +L A+V G+Y A + P + Sbjct: 61 QYAQETYDRVLKRDPDN---IAALYYRAYVNEKQGRYSFARMDYNNLLKIIPGNFEA--- 114 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ--LAA 191 +G++ ++ ++R+VE+Y +S AR + RN LA Sbjct: 115 --QLGLALLNQKDH------HYTEAMEQINRLVEQYPDSAVAYAARAGIECERNMFELAE 166 Query: 192 KEVEIGRYYLKRGE----YVAAIPRFQLVLA 218 + +KR Y+ + R L++ Sbjct: 167 YDYAEA---VKRDAGNTDYI--LNRADLLIR 192 >gi|270003434|gb|EEZ99881.1| hypothetical protein TcasGA2_TC002665 [Tribolium castaneum] Length = 1709 Score = 39.3 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 46/148 (31%), Gaps = 29/148 (19%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR--KS--------LLMSAFVQYSA 107 ++ E ++ +A + + FP A K+ LL + + Sbjct: 1555 NKLLEDGNTLYRKGRLREAAHRYQYALKKFPTEDQAEHNKAFRQLHMNFLLNYSRCKRKL 1614 Query: 108 GKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 + ++A L E + P+S Y YY + D + + L M + Sbjct: 1615 NETEEAMELANEVLIMNPDS----YEAYYSRAKA--------KLDLKLYENALADMREAL 1662 Query: 167 ERYTNSPYVKGARFY--VTVGRNQLAAK 192 + + R+++A K Sbjct: 1663 RLAP----AQNVEVRKVLAHLRDEIANK 1686 >gi|239996814|ref|ZP_04717338.1| putative unknown membrane associated protein [Alteromonas macleodii ATCC 27126] Length = 449 Score = 39.3 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 1/72 (1%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 ++ V + + ++ A L L + N+ Y + V K+ ++ A Sbjct: 127 AKVVEQQPIPEKFEMTTLFSLAQLNLMQGNYDDTITYLERWESLNA-GPVPVKNKVIKAQ 185 Query: 103 VQYSAGKYQQAA 114 Y +Y+QAA Sbjct: 186 AYYQNKQYEQAA 197 >gi|189235658|ref|XP_969896.2| PREDICTED: similar to rolling pebbles [Tribolium castaneum] Length = 1523 Score = 39.3 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 46/148 (31%), Gaps = 29/148 (19%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR--KS--------LLMSAFVQYSA 107 ++ E ++ +A + + FP A K+ LL + + Sbjct: 1369 NKLLEDGNTLYRKGRLREAAHRYQYALKKFPTEDQAEHNKAFRQLHMNFLLNYSRCKRKL 1428 Query: 108 GKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 + ++A L E + P+S Y YY + D + + L M + Sbjct: 1429 NETEEAMELANEVLIMNPDS----YEAYYSRAKA--------KLDLKLYENALADMREAL 1476 Query: 167 ERYTNSPYVKGARFY--VTVGRNQLAAK 192 + + R+++A K Sbjct: 1477 RLAP----AQNVEVRKVLAHLRDEIANK 1500 >gi|21115529|gb|AAM43455.1| polysaccharide deacetylase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575954|gb|AAY51364.1| polysaccharide deacetylase [Xanthomonas campestris pv. campestris str. 8004] Length = 952 Score = 39.3 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 18/126 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E+ + KE+ ++ A E F + + P A + FV Y +Y +AA E + Sbjct: 843 ERGLQLYKEKRYADAAEQFAEALKLRP--DFA-LAANNLGFVYYRQERYAEAARWLENTL 899 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGAR 179 P ++Y + D+ + + + AR Sbjct: 900 KIDPS----------RAVAYLNLGDAYAKAGDREKARKAYTTYLALQ---PQGAGAEQAR 946 Query: 180 FYVTVG 185 + Sbjct: 947 AQLQTL 952 >gi|120598361|ref|YP_962935.1| TPR repeat-containing protein [Shewanella sp. W3-18-1] gi|120558454|gb|ABM24381.1| TPR repeat-containing protein [Shewanella sp. W3-18-1] Length = 663 Score = 39.3 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 37/130 (28%), Gaps = 33/130 (25%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A+ + Q++S A + F QY AG Y+QA E+ Sbjct: 359 QQAMQAYQSQDYSNAAKQFESPQWR--------------GSAQYKAGDYEQALKTFEQ-- 402 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + Y G + Q+ + K Q + A+ Sbjct: 403 ------DSSAQGLYNQGNALMQLGK-----PDKAKERYQAALEQQPNFP------DAKAN 445 Query: 182 VTVGRNQLAA 191 + + L Sbjct: 446 LALAEKLLEE 455 >gi|327275674|ref|XP_003222598.1| PREDICTED: cell division cycle protein 27 homolog [Anolis carolinensis] Length = 833 Score = 39.3 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 59/195 (30%), Gaps = 48/195 (24%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + ++A + I P Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELEKALACFRNAIRMNPRHY 636 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-------YVKGARFY 181 N +Y +GM Y + Q L + + + S V+ A Sbjct: 637 N---AWYGLGMIYYK--------QEKFSLAEMHFQKALHINPQSSVLLCHIGVVQHALKK 685 Query: 182 VTVGRNQLAAKEVEI------GRYYLKRGEYVAAIPRFQLVLANYSDAEHA--EEAM--A 231 + L K + I ++ R + A +++ L + + +E++ Sbjct: 686 SEKALDTL-NKAINIDPKNPLCKF--HRASVLFANEKYKYALQELEELKQIVPKESLVYF 742 Query: 232 RLVEAYVALALMDEA 246 + + Y L A Sbjct: 743 LIGKVYKKLGQTHLA 757 >gi|306816118|ref|ZP_07450256.1| cellulose synthase subunit BcsC [Escherichia coli NC101] gi|305850514|gb|EFM50971.1| cellulose synthase subunit BcsC [Escherichia coli NC101] Length = 1157 Score = 39.3 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198 Q + +V R N ++ A G+ A ++ + Sbjct: 557 RGQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 611 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663 >gi|304391251|ref|ZP_07373195.1| putative tetratricopeptide repeat protein [Ahrensia sp. R2A130] gi|303296607|gb|EFL90963.1| putative tetratricopeptide repeat protein [Ahrensia sp. R2A130] Length = 228 Score = 39.3 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 35/100 (35%), Gaps = 3/100 (3%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +K TI ++AV ++ R + + + + + AV ++ +A Sbjct: 22 FWKRFGTIIIALAVAIVLAVSVW--RYMEYSAAKEAAASGDAFMSAVALAEDGKTEEAIA 79 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + + L +A G+ ++A + + Sbjct: 80 ALEKLEAEH-GGAYGAMAQLRAASELAKQGQKKEAIAAYD 118 >gi|282901136|ref|ZP_06309067.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] gi|281193968|gb|EFA68934.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] Length = 274 Score = 39.3 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 67/207 (32%), Gaps = 46/207 (22%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAAS 115 E+ +A + +F+ A +Y+ + FP + + + S K + A + Sbjct: 45 DELATQAFAATDKGDFATAEKYWTEIIERFPTNAGAWSNR-----GNSRVSQNKLEAALT 99 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + I P + Y ++ + + + + + ++E Sbjct: 100 DYNQAIKLAPNVTD-PY------LNRGTALEGLGK----WQEAIADYNHVLELDPQ---- 144 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE----AMA 231 + +A Y RG A + ++Q +A+Y A A A Sbjct: 145 -----------DAMA---------YNNRGNAQAGLGKWQEAIADYQKATQIAPNFAFARA 184 Query: 232 RLVEAYVALALMDEAREVVSLIQERYP 258 A + ++A + + I +YP Sbjct: 185 NYALAMYEIGKKEQAEKEMRNIVRKYP 211 >gi|73669941|ref|YP_305956.1| hypothetical protein Mbar_A2461 [Methanosarcina barkeri str. Fusaro] gi|72397103|gb|AAZ71376.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 398 Score = 39.3 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 19/176 (10%), Positives = 52/176 (29%), Gaps = 46/176 (26%) Query: 38 WERQSSRDVYLDSVTDVRYQREV----YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + DS + ++ + K + + +A E ++ + P +A Sbjct: 169 CRLKQHEKALGDSEKALSSNPKLGGAWHSKGSVLADLGRYEEAIEAYDAALKLNP--NLA 226 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES-------------------------- 127 + L+ F YS + +A + + P++ Sbjct: 227 -RVLVGKGFALYSLDRPVEAMIAYDAALKINPDNAKNWIGKGLIHLKLGKFKRAIAACSK 285 Query: 128 -----KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + +Y GM+++ + ++ L + R + ++ + A Sbjct: 286 AISIKPDSSDAWYCKGMAFSSLDKN--------GEALGALERALRIDPDNIEARKA 333 >gi|315295811|gb|EFU55128.1| tetratricopeptide repeat protein [Escherichia coli MS 16-3] Length = 1157 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198 Q + +V R N ++ A G+ A ++ + Sbjct: 557 RGQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 611 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663 >gi|158336407|ref|YP_001517581.1| TPR domain-containing protein [Acaryochloris marina MBIC11017] gi|158306648|gb|ABW28265.1| TPR domain protein [Acaryochloris marina MBIC11017] Length = 449 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 48/130 (36%), Gaps = 17/130 (13%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLK-EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 + V + + + +AV+ + + A ++ R P + ++ L Sbjct: 241 QSVAVSIPKQPSTADDYFLQAVMKQNVQGDLPGAMAALDEAIRLNPG--YS-QAFLTRGR 297 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQMIRDVPYDQRATKLMLQY 161 V ++ G QA + + I +P+ YV YL + + Q+ + T+ L Sbjct: 298 VNHARGNLTQALADFNQSIRIHPKG----YVGYLHRAIVHGQL--------KDTQQALAD 345 Query: 162 MSRIVERYTN 171 +++ N Sbjct: 346 YDQVIRLNPN 355 >gi|300795423|ref|NP_001179178.1| serine/threonine-protein phosphatase 5 [Bos taurus] gi|297485750|ref|XP_002695147.1| PREDICTED: protein phosphatase 5, catalytic subunit [Bos taurus] gi|296477574|gb|DAA19689.1| protein phosphatase 5, catalytic subunit [Bos taurus] Length = 499 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 48/156 (30%), Gaps = 31/156 (19%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102 + ++ E+ +A + K +++ A ++++Q P +S A+ Sbjct: 18 EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 74 Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y+ +A + ++YI YY S + + L Sbjct: 75 TECYGYALADATRAVEMDKKYIK----------GYYRRAASNMAL--------GKFRAAL 116 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + +V+ + A+ + K E Sbjct: 117 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 149 >gi|331659838|ref|ZP_08360776.1| cellulose synthase operon protein C [Escherichia coli TA206] gi|331053053|gb|EGI25086.1| cellulose synthase operon protein C [Escherichia coli TA206] Length = 1157 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198 Q + +V R N ++ A G+ A ++ + Sbjct: 557 RGQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 611 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663 >gi|226313169|ref|YP_002773063.1| hypothetical protein BBR47_35820 [Brevibacillus brevis NBRC 100599] gi|226096117|dbj|BAH44559.1| hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 1139 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 53/161 (32%), Gaps = 28/161 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV-ARKSLLMSAFVQ------Y-SAGKYQQA 113 A F ++ A +Y+ Q FA ++ A V Y + ++A Sbjct: 813 NIAKQFKLNGDYKSAEKYYYQIIDFCRFAEHHVPQAKTTIASVYSSLCLMYIDLEETEKA 872 Query: 114 ASLGEEYIT----QYPE--SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 ++ I YP ++ Y +G++Y + L +Y R Sbjct: 873 IGYSQQAIAINEMFYPNKEHPDLARDYNNLGLAYLYSHK--------YDLAKKYFKRAYR 924 Query: 168 RYTNSPYVKGARFYVTVGRNQL-----AAKEVEIGRYYLKR 203 Y + Y + N L A K++E+ + Y + Sbjct: 925 IY-KNIYENEINVDLVSVTNNLGMVSEAQKDLEVAKGYYET 964 >gi|149926798|ref|ZP_01915057.1| Tetratricopeptide TPR_2 [Limnobacter sp. MED105] gi|149824350|gb|EDM83568.1| Tetratricopeptide TPR_2 [Limnobacter sp. MED105] Length = 365 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 72/209 (34%), Gaps = 52/209 (24%) Query: 7 RAICIFEAWAYQLYKFALTIFFS-IAVCFLVGWERQS---SRDVYLDSVTDVRYQREVY- 61 + I + Y+ K+AL I +A G+ +S S+ + + + + Y Sbjct: 5 KTITSSISGKYKKSKYALLIALMGLAFAGAPGYADESDEVSKLIQSGQFEQAQARADAYL 64 Query: 62 ----EKAVLFL-------KEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAG 108 A + + ++A F + + DFP ++L + G Sbjct: 65 ANRPNDAQMRFLKGLILTERNKTAEAITVFTKLTEDFPELPEPYNNLAVL---YA--GRG 119 Query: 109 KYQQAASLGEEYITQYP----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 +Y++A E I +P +N+ VY KL Q + Sbjct: 120 EYEKARESLEMAIRTHPSYATAHENLGDVY--------------------AKLASQSYDK 159 Query: 165 IVERYT-NSPYVKGARFYVTVGRNQLAAK 192 ++ NS A+ +++ RN +A K Sbjct: 160 ALQLDGCNS----TAQTKLSLVRNLIAGK 184 >gi|59713865|ref|YP_206640.1| transporter [Vibrio fischeri ES114] gi|59482113|gb|AAW87752.1| transporter [Vibrio fischeri ES114] Length = 635 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 31/87 (35%), Gaps = 7/87 (8%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEY----FN-QCSRDFPFAGVARKSLLMSAFV 103 D +Y+++ Y+ A + + + A +Y + + +S A Sbjct: 347 DYNAHQQYEQKEYQAASEQFQSKQWKGAAQYKAGDYKGAIESLTGLSD--VQSQYNLANA 404 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNV 130 G+ + A + E + P+ K+ Sbjct: 405 LAQNGQLEDAKAQYESLLQANPDMKDA 431 >gi|26250164|ref|NP_756204.1| cellulose synthase subunit BcsC [Escherichia coli CFT073] gi|227883691|ref|ZP_04001496.1| cellulose synthase subunit BcsC [Escherichia coli 83972] gi|300971350|ref|ZP_07171419.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1] gi|301046599|ref|ZP_07193739.1| tetratricopeptide repeat protein [Escherichia coli MS 185-1] gi|26110593|gb|AAN82778.1|AE016768_196 Cellulose synthase operon protein C [Escherichia coli CFT073] gi|227839271|gb|EEJ49737.1| cellulose synthase subunit BcsC [Escherichia coli 83972] gi|300301437|gb|EFJ57822.1| tetratricopeptide repeat protein [Escherichia coli MS 185-1] gi|300411274|gb|EFJ94812.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1] gi|307555633|gb|ADN48408.1| cellulose synthase subunit [Escherichia coli ABU 83972] gi|315295429|gb|EFU54759.1| tetratricopeptide repeat protein [Escherichia coli MS 153-1] Length = 1157 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198 Q + +V R N ++ A G+ A ++ + Sbjct: 557 RGQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 611 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663 >gi|14324257|dbj|BAB59185.1| hypothetical protein [Thermoplasma volcanium GSS1] Length = 240 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 62/203 (30%), Gaps = 44/203 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEE 119 E+ + + + KA E F + + + + L YS Y QA E Sbjct: 25 ERGISYFNIGKYDKAVEEFTK-----AISIINDDADLYHNRGMAYYSMKAYDQAIEDFER 79 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I+ P S + Y + V D + L+ + + Sbjct: 80 SISLDPNSSD-----------YHNALGSVYEDMGNYEKALEEFNSAIR------------ 116 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-NYSDAEHAEEAMARLVEAYV 238 + L G Y K GE AI + +Y+D + + EA Sbjct: 117 -----LEDDLPDYYYNRGNVYWKLGEIEKAIQDYSKAADLDYTDQIYV----YKKYEALT 167 Query: 239 ALALMDEA----REVVSLIQERY 257 +L DEA + + ++ Y Sbjct: 168 SLGRYDEALETVDKAIKVVPANY 190 >gi|95929845|ref|ZP_01312586.1| hypothetical protein Dace_2499 [Desulfuromonas acetoxidans DSM 684] gi|95134141|gb|EAT15799.1| hypothetical protein Dace_2499 [Desulfuromonas acetoxidans DSM 684] Length = 786 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 54/148 (36%), Gaps = 31/148 (20%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +A ++ + +++ A E + + FP + +A ++ Y Y A + Sbjct: 341 QADVWFDQGDYAAAVERYQSLANQLADFP-SSLANFAM-----SLYRQKDYDGAIVQLKR 394 Query: 120 YIT--QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 ++ PES+++ YL+ MS MI D + +I+ + Sbjct: 395 FLEGVDDPESRDM--ARYLLAMS---MIHRGDKDAG-----YDLLHQII---PGTQGALL 441 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 A+ + A + + ++ +R Sbjct: 442 AKAKI-------ADLSMVVDDFHSRRRA 462 >gi|332711481|ref|ZP_08431412.1| hypothetical protein LYNGBM3L_67770 [Lyngbya majuscula 3L] gi|332349459|gb|EGJ29068.1| hypothetical protein LYNGBM3L_67770 [Lyngbya majuscula 3L] Length = 922 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 39/103 (37%), Gaps = 5/103 (4%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSV--TDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + FS+ VC +G ++ ++ T ++ E+ V + + ++ A E Sbjct: 13 LGILFLFSLTVCIGLGHLPSIAQPAEPGNMATTQAANPSQLVEQGVEYYQAGDYQGAIEP 72 Query: 80 FNQCSRDFPFA-GVARKSLL--MSAFVQYSAGKYQQAASLGEE 119 + + + + +++ A G Q+A S E+ Sbjct: 73 WQNALKLYQQSNNYTNSAIVRENLARAYQKIGHIQEAISNWEQ 115 >gi|298248115|ref|ZP_06971920.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter racemifer DSM 44963] gi|297550774|gb|EFH84640.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter racemifer DSM 44963] Length = 652 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 64/204 (31%), Gaps = 42/204 (20%) Query: 71 QNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 +A F Q P + + K +L+ G++++A E+ I P + Sbjct: 465 GRAEEALTAFEQVIHLEPTRISAYSHKGILLRT-----LGRHEEALEAFEQSIRLDPTNA 519 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYVKGARF--YVTV 184 + Y + +++ + + L+ + + S Y + Sbjct: 520 DA----YQ---AKGEVLDTLGR----LEEALEAFEQSIRLNPKDASVYFSKGLTLWGLKH 568 Query: 185 GRNQLAAKEVEI------GRYYLKR-------GEYVAAIPRFQLVL-------ANYSDAE 224 LA E I +Y + G A+ + + Y + Sbjct: 569 MEEALANFEYAIQLDPKNATFYRTKGILLRIIGHNEEALTALEYAVQLRPNDAEAYQNKG 628 Query: 225 HAEEAMARLVEAYVALALMDEARE 248 +A E + R+ EA+ A E RE Sbjct: 629 YALEKLGRMSEAHQAYQKAHELRE 652 >gi|256848362|ref|ZP_05553805.1| conserved hypothetical protein [Lactobacillus coleohominis 101-4-CHN] gi|256714960|gb|EEU29938.1| conserved hypothetical protein [Lactobacillus coleohominis 101-4-CHN] Length = 237 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 10/107 (9%) Query: 19 LYKFALT-----IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73 + K AL+ + F +A C + VT+ + Y+KA + + + Sbjct: 8 MSKLALSTAGVALVFGLAGCGQKNSASSDNNSTKSAKVTE-SAADKAYKKANDLITKGQY 66 Query: 74 SKAYEYFNQCS---RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 KAY+ + + + S L A Y+ G YQ+A + Sbjct: 67 QKAYDLLDDVEHENKKVEYLEEDLDSYLE-AREDYNKGDYQEAEAEL 112 >gi|223935814|ref|ZP_03627729.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514] gi|223895415|gb|EEF61861.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514] Length = 893 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 68/198 (34%), Gaps = 42/198 (21%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG----VARKSLLMSAFVQYSAGKYQQAASL 116 Y+ V + N+ +A E F++ P + L + + YS A + Sbjct: 709 YQLGVTLARGGNYRQAIEQFDRARTLTPENNNCNLW--LAQLYISTLHYSN-----ALAA 761 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + + P + + G+S Q+ + + +++++ TN+ Y Sbjct: 762 VNKALDAAPNDPD---ALFFKGISLIQL--------KDYDGAIPPLNQLLNLQTNN-YSA 809 Query: 177 GARFYVTVGRN---QLAAKEVE----IG-----RYY------LKRGEYVAAIPRFQLVLA 218 + + A K+ E + YY + + AAI ++ L Sbjct: 810 KLNRAIAYLHSGDLSAARKDYESITSVAPKVYQAYYGLAEIAYRNKDKPAAINYYKSYLT 869 Query: 219 NY-SDAEHAEEAMARLVE 235 N D + ++ +RL E Sbjct: 870 NAPPDTDEVKQVESRLKE 887 >gi|162453730|ref|YP_001616097.1| hypothetical protein sce5454 [Sorangium cellulosum 'So ce 56'] gi|161164312|emb|CAN95617.1| hypothetical protein predicted by Glimmer/Critica [Sorangium cellulosum 'So ce 56'] Length = 525 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 40/131 (30%), Gaps = 13/131 (9%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S + D + Q + + R+ SP A ++A Sbjct: 373 SDLHALGDAARLGGSPARAAQAFASLRARFPGSPEAASA----AFLLGRIAQ-------- 420 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + ++ AA F L A EA RLVEA AR +P Sbjct: 421 -DQSKDHAAAARWFARYLREQPAGAFAAEAAGRLVEAEDRRGDEAGARRAAEQYLAAHPS 479 Query: 260 GYWARYVETLV 270 G A Y + ++ Sbjct: 480 GSHAGYAKHVL 490 Score = 35.5 bits (81), Expect = 7.9, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 28/78 (35%), Gaps = 1/78 (1%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-VQYSA 107 D++ D +++ + ++A + F FP + A + + Q + Sbjct: 364 DALCDAASASDLHALGDAARLGGSPARAAQAFASLRARFPGSPEAASAAFLLGRIAQDQS 423 Query: 108 GKYQQAASLGEEYITQYP 125 + AA Y+ + P Sbjct: 424 KDHAAAARWFARYLREQP 441 >gi|15604101|ref|NP_220616.1| hypothetical protein RP230 [Rickettsia prowazekii str. Madrid E] gi|3860793|emb|CAA14693.1| unknown [Rickettsia prowazekii] gi|292571827|gb|ADE29742.1| hypothetical protein rpr22_CDS225 [Rickettsia prowazekii Rp22] Length = 250 Score = 39.3 bits (91), Expect = 0.51, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 50/159 (31%), Gaps = 27/159 (16%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 TD ++++++ A+L N SK + F P+ +++ A Y K Sbjct: 82 TDDFKKQDIFDIALLEGMHDNVSK--KTFEVNKDIAPY----KQA-YDLALAAYKDNKLT 134 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 +A + +I +YP + + Y+ + + + Y+ E Sbjct: 135 EAKDKFKNFIQKYPNNSLISNAYFWYAECFFKQKD-------YNGAAINYLKCYKES-PK 186 Query: 172 SPYVKGA----------RFYVTVGRNQLAA--KEVEIGR 198 + N LA KE I R Sbjct: 187 GAKSSDGLLKLALSLGELKKMQEACNILAKLDKEFPINR 225 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 1/86 (1%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 + L G S+ + + D+ ++ Y+ A+ K+ ++A + F + +P Sbjct: 93 IALLEGMHDNVSKKTF-EVNKDIAPYKQAYDLALAAYKDNKLTEAKDKFKNFIQKYPNNS 151 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLG 117 + + A + Y AA Sbjct: 152 LISNAYFWYAECFFKQKDYNGAAINY 177 >gi|308270597|emb|CBX27209.1| hypothetical protein N47_A12380 [uncultured Desulfobacterium sp.] Length = 286 Score = 39.3 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 27/72 (37%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + + ++ A F+ + + K+L + ++ AAS ++ Sbjct: 56 YNRGCAAYQNSDYKAADAAFSSVLKRTDDKELRYKALYNLGNTAFKQKDFESAASYYKQA 115 Query: 121 ITQYPESKNVDY 132 I P S++ Y Sbjct: 116 IICNPNSEDAGY 127 >gi|302039008|ref|YP_003799330.1| putative soluble lytic murein transglycosylase [Candidatus Nitrospira defluvii] gi|300607072|emb|CBK43405.1| putative Soluble lytic murein transglycosylase [Candidatus Nitrospira defluvii] Length = 745 Score = 39.3 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 62/198 (31%), Gaps = 19/198 (9%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 LK+ +A E + P + + K+ + YSA +A + Sbjct: 130 GESLLKQNEPIQAAELLETIPKIVPDSSLIAKAAYRTGEAWYSANVCFRAVDWLGRAVVL 189 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 + + + + R + ++ RY +SP + A+ + Sbjct: 190 AEKDPAAPLALWHQAECHIRENRLP--------EARTALKQLWLRYPHSPEAREAKARLD 241 Query: 184 VGRNQLAAKEVE--IGRYYLKRGEYVA------AIPRFQLVLANYSDAEHAEEAMARLVE 235 L + + ++ ++ A+ + LA +A +L Sbjct: 242 TA---LGGESWAPTAEDHSIRAQAFLGLAMQAEAVEELRRFLAMAPGHPRRFDARLKLGV 298 Query: 236 AYVALALMDEAREVVSLI 253 AYV L D+ARE + Sbjct: 299 AYVRLKQYDQARETFRAL 316 >gi|262199604|ref|YP_003270813.1| hypothetical protein Hoch_6451 [Haliangium ochraceum DSM 14365] gi|262082951|gb|ACY18920.1| Tetratricopeptide TPR_4 [Haliangium ochraceum DSM 14365] Length = 282 Score = 39.3 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 23/75 (30%), Gaps = 6/75 (8%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-MSAFVQYSA 107 D R +Y + + +A E F F R +LL Sbjct: 33 DDEDTDERARTLYMEGEAHYAAGRYEEAAESF--LEA---FNLSGRTALLFNLGNAYERM 87 Query: 108 GKYQQAASLGEEYIT 122 G Y++AA Y+ Sbjct: 88 GDYERAAEYLRRYVD 102 >gi|193786429|dbj|BAG51712.1| unnamed protein product [Homo sapiens] Length = 708 Score = 39.3 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P+ ++V L + Y + + D D A+ + Sbjct: 314 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSIDP-ASIEARED 367 Query: 162 MSRIVERY 169 ++ V+R+ Sbjct: 368 LTMFVKRH 375 >gi|119510581|ref|ZP_01629711.1| TPR repeat protein [Nodularia spumigena CCY9414] gi|119464742|gb|EAW45649.1| TPR repeat protein [Nodularia spumigena CCY9414] Length = 422 Score = 39.3 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 16/124 (12%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E Y + + K+++++ A E F+ + P+ A + L Y +G +A S Sbjct: 3 DEFYNQGLKKAKDKDYAGAIEEFSNSLQLIPY--FA-DAFLQRGLAYYHSGAIHKAVSDY 59 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E + P S + YY G++ ++ L + + NS Y Sbjct: 60 TEAVRLNPGSMDG---YYCRGLARLELKNLPG--------ALSDVDMAIRL--NSDYAPA 106 Query: 178 ARFY 181 Sbjct: 107 YNLR 110 >gi|13324596|gb|AAK18801.1|AF305609_1 LMP1 [Borrelia burgdorferi] Length = 1173 Score = 39.3 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117 + ++ NF ++ EY N F A+K ++ + ++ K +++ Sbjct: 935 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 988 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175 + I P + +Y YL + + + S ++E+ S Y+ Sbjct: 989 NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 1037 Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222 A+ Y G A +E +G Y K Y AI F+ + N Sbjct: 1038 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 1094 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259 EA L + + A++++ ++ P+ Sbjct: 1095 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1132 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK++N+ A ++ P + + A +G QA S E+ Sbjct: 1002 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 1058 Query: 120 YI 121 I Sbjct: 1059 II 1060 Score = 35.5 bits (81), Expect = 8.6, Method: Composition-based stats. Identities = 11/124 (8%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + ++ D + + + A + + KA + + + ++ + Sbjct: 786 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNTQEDHYKLGII 838 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 ++ KY+ + ++ I P+ K + G++ + ++ K ++ Sbjct: 839 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 887 Query: 164 RIVE 167 + ++ Sbjct: 888 KAIQ 891 Score = 35.1 bits (80), Expect = 9.4, Method: Composition-based stats. Identities = 39/279 (13%), Positives = 77/279 (27%), Gaps = 74/279 (26%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSR 85 ++A + + + + Y + Q + Y+ ++ K + + + E F+ + Sbjct: 801 TLAQAYENNGDLLKAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDP 860 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +K+L K ++A E+ I KN YY G++ + Sbjct: 861 KH------KKALHNKGIALMMLNKNKKAIESFEKAIQI---DKNYGTAYYQKGIAEEKN- 910 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------------RFYVTVGR------ 186 + N Y A Y+ Sbjct: 911 -------GDMQQAFASFKNAYNLDKNPNYALKAGIVSNNLGNFKQSEEYLNFFNANAKKP 963 Query: 187 NQLAAKEVEIGRY------------------------Y--------LKRGEYVAAIPRFQ 214 N++A + I ++ Y LK+ Y AI + Sbjct: 964 NEIAIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNAISLYS 1023 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 LV+ + A L +AY +A + I Sbjct: 1024 LVIEKNPENTSAY---INLAKAYEKSGNKSQAISTLEKI 1059 >gi|260062650|ref|YP_003195730.1| hypothetical protein RB2501_13704 [Robiginitalea biformata HTCC2501] gi|88784217|gb|EAR15387.1| hypothetical protein RB2501_13704 [Robiginitalea biformata HTCC2501] Length = 334 Score = 39.3 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 9/80 (11%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +++ + + ++ A + + D P VA ++ A + G A Sbjct: 241 SDLFVRGKRLAQTGDWDGAARLWER-ETDHPKGKVAGRAFYNMAIINEINGDLDAAIDWA 299 Query: 118 EE----YITQYPESKNVDYV 133 + T++ +DY Sbjct: 300 RRSYADFGTRH----ALDYA 315 >gi|83941127|ref|ZP_00953589.1| TPR domain protein [Sulfitobacter sp. EE-36] gi|83846947|gb|EAP84822.1| TPR domain protein [Sulfitobacter sp. EE-36] Length = 206 Score = 39.3 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 25/69 (36%), Gaps = 7/69 (10%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117 +Y + + E + + A + + P FA ++ ++AG Y A Sbjct: 89 LYSRGRDAMSEGDTTLAIAHLTALTDHAPDFAEGYHARAQ-----AYFAAGLYGPAIDDL 143 Query: 118 EEYITQYPE 126 E + P+ Sbjct: 144 ETTLALNPQ 152 >gi|330448835|ref|ZP_08312480.1| tetratricopeptide repeat family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328493026|dbj|GAA06977.1| tetratricopeptide repeat family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 288 Score = 39.3 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 38/109 (34%), Gaps = 17/109 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + ++ + ++ A E F + + + K + AF A S ++ Sbjct: 158 YNRGMIHIANNDYKSALECFEKIEKSNAY-INTPKFWINRAFAAKRTDNVSDAMSFIDKA 216 Query: 121 ITQYPESKNVDYVYY-------LVG------MSYAQMIRDVPYDQRATK 156 + P + Y Y L+G + Q ++++ D TK Sbjct: 217 LKIAPNNI---YALYNKLCYSCLLGKEDIELLKLYQKVKELNCDPDYTK 262 >gi|328541884|ref|YP_004301993.1| Thioredoxin [polymorphum gilvum SL003B-26A1] gi|326411635|gb|ADZ68698.1| Thioredoxin [Polymorphum gilvum SL003B-26A1] Length = 334 Score = 39.3 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 29/83 (34%), Gaps = 5/83 (6%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 ++ E+A L +++ +A ++F + P + ++L A G Sbjct: 155 KAPGAAETEQLLEQADALLAAKDYGQAAQHFGAVLQMAPDS---VRALAGLARCYLGTGD 211 Query: 110 YQQAASLGEEYITQYPESKNVDY 132 +A E + P + Y Sbjct: 212 AARARQALE--MVPEPGHADPAY 232 >gi|253701559|ref|YP_003022748.1| hypothetical protein GM21_2961 [Geobacter sp. M21] gi|251776409|gb|ACT18990.1| Tetratricopeptide domain protein [Geobacter sp. M21] Length = 635 Score = 39.3 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 35/113 (30%), Gaps = 16/113 (14%) Query: 146 RDVPYDQRATKLMLQY------MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + P D+ + + E Y S V A + + ++ IG Sbjct: 459 PEAPQDEEPARKDAAAPGLSQRLRDWEEIYPESEDVPEAELDIEELESH---YDLGIG-- 513 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAE-EAMARLVEAYVALALMDEAREVVS 251 Y + G Y AI F + N H + + Y D A +++ Sbjct: 514 YKEMGMYGGAIKEFDIAARN----PHRRLDCLTLQAICYREKGEADRAEDLLR 562 >gi|166367560|ref|YP_001659833.1| putative branched-chain amino acid transport system substrate-binding protein [Microcystis aeruginosa NIES-843] gi|166089933|dbj|BAG04641.1| putative branched-chain amino acid transport system substrate-binding protein [Microcystis aeruginosa NIES-843] Length = 870 Score = 39.3 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 22/175 (12%), Positives = 54/175 (30%), Gaps = 37/175 (21%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYL-----DSVTDVRYQREVYEKAVLFLKEQNFSKA 76 F L++ ++++ + G + + + Q + E+ K + + +A Sbjct: 406 FILSLLVTLSILYWGGVFSDDASKYPEISLGEEILLKTNRQDNIIERGRQAFKNKEYKQA 465 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP----------E 126 + F + P + Y+ A + + + P Sbjct: 466 IQLFKKSLDRLPNNP--------EIRIYYNN-----ARAAYQ---DRNPLKIATSVPLGN 509 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + L G++ Q + D++A ++ +V NSP A+ Sbjct: 510 NPETAQEI-LRGIALFQEELN---DEQAKNPDFHFLQVVVANDNNSP--VDAKDR 558 >gi|126654513|ref|XP_001388427.1| hypothetical protein [Cryptosporidium parvum Iowa II] gi|126117367|gb|EAZ51467.1| hypothetical protein cgd8_2120 [Cryptosporidium parvum Iowa II] Length = 514 Score = 39.3 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 49/152 (32%), Gaps = 30/152 (19%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQ----CSR------------DFPFAGVARKSLLM 99 +E+ + K N+S A E + + + + + + + L Sbjct: 30 SAKELKDAGNESYKGGNYSDAREKYEKGLELLEKIDQKDDEKEGFGEDEMSELRQSLQLN 89 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 A + ++ +A + + + + SKNV Y G++ + Sbjct: 90 LAMIYVKIQEWSKAIQVTGQVLKKN--SKNVK-ALYRRGLARLGF--------GMYEESK 138 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 + +++ ++ A + V R ++ Sbjct: 139 EDFQNVLKLDPSN---ADAHRQLKVLRQKIQE 167 >gi|157164370|ref|YP_001466352.1| ADP-heptose-LPS heptosyltransferase II [Campylobacter concisus 13826] gi|112800119|gb|EAT97463.1| TPR repeat-containing protein [Campylobacter concisus 13826] Length = 280 Score = 39.3 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 48/147 (32%), Gaps = 19/147 (12%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + S + +++ + L N ++A EYF ++ S Sbjct: 148 NANPKQQNKPTSNFSGKSDKDILADGIKLLNSGNSTEAAEYFEYLNKK---GYKTGASNY 204 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKN-VDY---VYYLVGMSYAQMIRDVPYDQRA 154 V YS Y A ++ I S++ DY + Y +S+ ++ Sbjct: 205 YLGEVAYSQKSYSTAIQYYKKSIQ----SEDKADYTPKLLYHTAISFDKI--------GD 252 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFY 181 T+ ++ + Y +S K A Sbjct: 253 TQSANRFYKALKVGYPDSKEAKAAPNR 279 >gi|308798761|ref|XP_003074160.1| anaphase promoting complex subunit 6/cell division cycle protein (IC) [Ostreococcus tauri] gi|55978030|gb|AAV68615.1| anaphase promoting complex subunit 6/cell division cycle protein 16-like protein [Ostreococcus tauri] gi|116000332|emb|CAL50012.1| anaphase promoting complex subunit 6/cell division cycle protein (IC) [Ostreococcus tauri] Length = 620 Score = 39.3 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 17/123 (13%), Positives = 46/123 (37%), Gaps = 15/123 (12%) Query: 60 VYEK-AVLFLKEQNFSKAYEYFNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ + VL ++ N+ +A E F + P + ++ A G+Y +A + Sbjct: 412 LFNEYGVLRYRQGNYEEAVENFERALDLAPKPVGSRW-ESLIVNLAQAFRKIGRYDEAIA 470 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + P + + Y +++ ++ + + L ++Y + + S Sbjct: 471 TFQSALLISPRNAST-YA----ALAFTYQMKSRCSEPVSLGLAIEYYHKAL-----SLRA 520 Query: 176 KGA 178 A Sbjct: 521 DDA 523 >gi|1354207|gb|AAB82061.1| rof1 [Arabidopsis thaliana] Length = 551 Score = 39.3 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 52/151 (34%), Gaps = 26/151 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ----CSRDFPFA-GVARKSL-------LMSAFVQYSAGK 109 E+ K +S A + + + D F+ +++ L A + Sbjct: 405 EEGNSKFKGGKYSLASKRYEKAVKFVEYDTSFSEEEKKQAKALKVACNLNDAACKLKLKD 464 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+QA L + + ES NV Y +Y ++ D+ + K L E Sbjct: 465 YKQAEKLCTKVLEL--ESTNVK-ALYRRAQAYMELS-DLDLAEFDVKKAL-------EID 513 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 N+ VK + + + KE ++Y Sbjct: 514 PNNREVKLEQKRLKEKMKEFNKKE---AKFY 541 >gi|27764882|ref|NP_060662.2| prolyl 3-hydroxylase 2 isoform a [Homo sapiens] gi|74714365|sp|Q8IVL5|P3H2_HUMAN RecName: Full=Prolyl 3-hydroxylase 2; AltName: Full=Leprecan-like protein 1; AltName: Full=Myxoid liposarcoma-associated protein 4; Flags: Precursor gi|27526730|emb|CAD23039.2| leprecan-like 1 protein [Homo sapiens] gi|119598515|gb|EAW78109.1| leprecan-like 1, isoform CRA_a [Homo sapiens] gi|193784998|dbj|BAG54151.1| unnamed protein product [Homo sapiens] Length = 708 Score = 39.3 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P+ ++V L + Y + + D D A+ + Sbjct: 314 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSIDP-ASIEARED 367 Query: 162 MSRIVERY 169 ++ V+R+ Sbjct: 368 LTMFVKRH 375 >gi|300871595|ref|YP_003786468.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] gi|300689296|gb|ADK31967.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] Length = 747 Score = 39.3 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 66/191 (34%), Gaps = 58/191 (30%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-------SAFVQYSAGKYQQ 112 +Y K L ++ + F A +YF + A++ + ++ G Y + Sbjct: 43 LY-KGQLCVEIKKFDDAIKYFEE----------AKRVDINTFKSYNLLGISYHAIGNYDK 91 Query: 113 AASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A E + P+S Y Y L+G+SY + ++ ++ +E Sbjct: 92 AIECFYETLKIIPKS----YTAYNLLGISYYKKNEH--------DKAIECFNKAIEINP- 138 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 N LA Y+ + Y AAI F+ +++ +E + Sbjct: 139 ---------KYDKAYNNLA-------LYHYRSKNYEAAINFFE-------NSKSMDEMLF 175 Query: 232 RLVEAYVALAL 242 +AY L + Sbjct: 176 ---KAYDMLGM 183 >gi|257466264|ref|ZP_05630575.1| Tetratricopeptide TPR_2 repeat protein [Fusobacterium gonidiaformans ATCC 25563] Length = 185 Score = 39.3 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 8/76 (10%) Query: 70 EQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 ++++ A +F + A+V Y KY++A E+ + P S Sbjct: 51 KKDYDTAIYFFEKLMTLDATNGNWPGF----LAYVYYEQEKYKKAIPYFEKSVDLSPNSP 106 Query: 129 NVDYVYYLVGMSYAQM 144 + Y+L+G SY+++ Sbjct: 107 FI---YFLLGNSYSRL 119 >gi|255081975|ref|XP_002508206.1| PAF1 complex protein [Micromonas sp. RCC299] gi|226523482|gb|ACO69464.1| PAF1 complex protein [Micromonas sp. RCC299] Length = 1262 Score = 39.3 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 5/77 (6%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + + + N+ A + Q + F F + + L A Y A ++A + + Sbjct: 832 NQGHIQMAKGNYVAAARNYEQAQQRFFFG-MDPRVALYQARNHYEANNMEEAKVTLKRAL 890 Query: 122 TQYP-ESK---NVDYVY 134 P + + N+ YVY Sbjct: 891 HVAPWDHRLRFNLAYVY 907 >gi|154503155|ref|ZP_02040215.1| hypothetical protein RUMGNA_00979 [Ruminococcus gnavus ATCC 29149] gi|153796149|gb|EDN78569.1| hypothetical protein RUMGNA_00979 [Ruminococcus gnavus ATCC 29149] Length = 182 Score = 39.3 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 27/99 (27%), Gaps = 22/99 (22%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K A + +++ C L G +L++ N+ +A F Sbjct: 2 KRATLLALTVSACLLTGCTNALKD-------------------GTGYLEDGNYKEAVTAF 42 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + + ++ Y Y A E+ Sbjct: 43 QKAVDE---GKKTAEAYRGLGMAYYEQEDYASAKDAFEK 78 >gi|145525781|ref|XP_001448707.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124416262|emb|CAK81310.1| unnamed protein product [Paramecium tetraurelia] Length = 479 Score = 39.3 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 40/153 (26%), Gaps = 30/153 (19%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-MSAFVQYSAGK 109 +++ ++ E K NF KA E + R L AF Sbjct: 2 ISNSPEAEKLKELGNEQFKLSNFPKAIELYTAAVEKAAGNQ--RLVCLSNRAFAHIKMEN 59 Query: 110 YQQAASLGEE-------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y A +E +I YY G +Y + + + + Sbjct: 60 YGLAIIDADEILKEDSGFIK----------AYYRKGSAYLLLGKFDD-----ARKEFKRA 104 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + + + + + + +E Sbjct: 105 DTLTQG-----KDADIQAKLKQIKQAIYEREFA 132 >gi|13324580|gb|AAK18793.1|AF305601_1 LMP1 [Borrelia burgdorferi] Length = 957 Score = 39.3 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117 + ++ NF ++ EY N F A+K ++ + ++ K +++ Sbjct: 719 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 772 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175 + I P + +Y YL + + + S ++E+ S Y+ Sbjct: 773 NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 821 Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222 A+ Y G A +E +G Y K Y AI F+ + N Sbjct: 822 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 878 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259 EA L + + A++++ ++ P+ Sbjct: 879 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 916 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK++N+ A ++ P + + A +G QA S E+ Sbjct: 786 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 842 Query: 120 YI 121 I Sbjct: 843 II 844 Score = 35.5 bits (81), Expect = 9.0, Method: Composition-based stats. Identities = 11/124 (8%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + ++ D + + + A + + KA + + + ++ + Sbjct: 570 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNTQEDHYKLGII 622 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 ++ KY+ + ++ I P+ K + G++ + ++ K ++ Sbjct: 623 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 671 Query: 164 RIVE 167 + ++ Sbjct: 672 KAIQ 675 Score = 35.1 bits (80), Expect = 9.7, Method: Composition-based stats. Identities = 39/279 (13%), Positives = 77/279 (27%), Gaps = 74/279 (26%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSR 85 ++A + + + + Y + Q + Y+ ++ K + + + E F+ + Sbjct: 585 TLAQAYENNGDLLKAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDP 644 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +K+L K ++A E+ I KN YY G++ + Sbjct: 645 KH------KKALHNKGIALMMLNKNKKAIESFEKAIQI---DKNYGTAYYQKGIAEEKN- 694 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------------RFYVTVGR------ 186 + N Y A Y+ Sbjct: 695 -------GDMQQAFASFKNAYNLDKNPNYALKAGIVSNNLGNFKQSEEYLNFFNANAKKP 747 Query: 187 NQLAAKEVEIGRY------------------------Y--------LKRGEYVAAIPRFQ 214 N++A + I ++ Y LK+ Y AI + Sbjct: 748 NEIAIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNAISLYS 807 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 LV+ + A L +AY +A + I Sbjct: 808 LVIEKNPENTSAY---INLAKAYEKSGNKSQAISTLEKI 843 >gi|77747992|ref|NP_639573.2| polysaccharide deacetylase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|77761345|ref|YP_245384.2| polysaccharide deacetylase [Xanthomonas campestris pv. campestris str. 8004] Length = 901 Score = 39.3 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 18/126 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E+ + KE+ ++ A E F + + P A + FV Y +Y +AA E + Sbjct: 792 ERGLQLYKEKRYADAAEQFAEALKLRP--DFA-LAANNLGFVYYRQERYAEAARWLENTL 848 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGAR 179 P ++Y + D+ + + + AR Sbjct: 849 KIDPS----------RAVAYLNLGDAYAKAGDREKARKAYTTYLALQ---PQGAGAEQAR 895 Query: 180 FYVTVG 185 + Sbjct: 896 AQLQTL 901 >gi|310789734|gb|EFQ25267.1| tetratricopeptide [Glomerella graminicola M1.001] Length = 523 Score = 39.3 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 18/101 (17%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A+ F +A + F + S K L + + G++++A + I Sbjct: 13 ALGRYDNNEFDEALKDFEKISD-------TSKILFNMGVIHATLGEHEKAVECYQRAIKL 65 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + + Y+ G+S + + L + Sbjct: 66 ---DQYLAVAYFQQGVSNFLL--------GDFEEALANFND 95 >gi|331221982|ref|XP_003323665.1| DnaJ and TPR domain-containing protein [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309302655|gb|EFP79246.1| DnaJ and TPR domain-containing protein [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 545 Score = 39.3 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 4/72 (5%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D +Y+KA + A + + F K+ + A + +G Y+ Sbjct: 70 DPDDYLTLYKKATTQMSLGQNHHASQSLQKVLSLKDF----DKAQIQLARIHLKSGDYEA 125 Query: 113 AASLGEEYITQY 124 + E + + Sbjct: 126 CQTELESFRKNH 137 >gi|300870120|ref|YP_003784991.1| tetratricopeptide repeat-containing protein [Brachyspira pilosicoli 95/1000] gi|300687819|gb|ADK30490.1| tetratricopeptide repeat family protein [Brachyspira pilosicoli 95/1000] Length = 420 Score = 39.3 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 74/229 (32%), Gaps = 59/229 (25%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 ++++V +D + ++ + K + +++A +Y+++ + P Sbjct: 82 DNNKEVDIDRLNNLTDYHDYNSKGIYKSANGEYAEAIKYYDEAIKLNP----------NM 131 Query: 101 AFVQY-------SAGKYQQAASLGEEYITQYPESKNVD--YVYYLVGMSYAQMIRDVPYD 151 A Y G ++A ++ I D Y YY G+ + D Sbjct: 132 ADAYYNKAIAKTKLGLLKEAIEEYDKAIEL-----RADYTYAYYNRGL--------LKSD 178 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA-AKEVEIGRYYLKRGEYVAAI 210 + ++ + + N + A + ++L +KE AI Sbjct: 179 LGLLEEAIKDFDKALSIDPN---LFDAYNNKGLLEDELGFSKE---------------AI 220 Query: 211 PRFQLVLANYSDAEHAEEAMAR--LVEAYVALALMDEA-REVVSLIQER 256 F + + A+A A L L +EA ++ I+ Sbjct: 221 KDFNKAIKLNPNY-----ALAYNNRGTAKDNLGLYEEAIKDYNKAIKLN 264 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 49/158 (31%), Gaps = 17/158 (10%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G ++ +D + Y + + +A E F++ + P Sbjct: 247 LGLYEEAIKDYNKAIKLNPNYALAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDN---TD 303 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + +Y+ Y++A ++ I P N + Y G + + Sbjct: 304 AYNNRGNAKYNLELYEEAIKDYDKTIKLNP---NYAFAYNNRGNAKDNL--------GLY 352 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + ++ + ++ + YV A + L E Sbjct: 353 EEAIEDFDKAIKLNPD--YV-DAYNNRGFTKENLGLYE 387 >gi|260769475|ref|ZP_05878408.1| TPR domain protein in aerotolerance operon [Vibrio furnissii CIP 102972] gi|260614813|gb|EEX39999.1| TPR domain protein in aerotolerance operon [Vibrio furnissii CIP 102972] Length = 647 Score = 39.3 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 33/86 (38%), Gaps = 17/86 (19%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCS----RDF----------PFAGVAR---KSLLMSAFVQ 104 ++A+ +++++ A E F + F+ VA ++ A Sbjct: 349 QQAMQAFEQKDYQHAAEQFTDPQWQGIARYEAKDYQGAIDAFSQVAAPDSRTQYNLANAY 408 Query: 105 YSAGKYQQAASLGEEYITQYPESKNV 130 AG+ +QA ++ + P++ + Sbjct: 409 AQAGQLEQARDRYQQLLQTDPDNADA 434 >gi|255084906|ref|XP_002504884.1| predicted protein [Micromonas sp. RCC299] gi|226520153|gb|ACO66142.1| predicted protein [Micromonas sp. RCC299] Length = 1072 Score = 39.3 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 25/69 (36%), Gaps = 3/69 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A L++ +A E F P + + A + Y G A S +E + Sbjct: 337 DQARLYVDIGEPKRALEQFQNLRERIPDNP---EVAVELAKMHYQMGNPDLAESTLDELM 393 Query: 122 TQYPESKNV 130 +P + Sbjct: 394 AAHPTRADA 402 >gi|148508298|gb|ABQ76082.1| tetratricopeptide repeat protein [uncultured haloarchaeon] Length = 248 Score = 39.3 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 12/106 (11%), Positives = 32/106 (30%), Gaps = 11/106 (10%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 K + + + +A + + R + A + A+ + AG+ + A E + Sbjct: 107 NKGAAHGQLEEWDEAIGSYKEALRIDDESEHAASAETNLAYALWEAGEAESALQHAERAV 166 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 P +Y G +++ + + + Sbjct: 167 KVDPRFPQ---AWYNRG--------FFLHERGLNEEAVSAFDNAIR 201 >gi|150377245|ref|YP_001313840.1| TPR repeat-containing protein [Sinorhizobium medicae WSM419] gi|150031792|gb|ABR63907.1| Tetratricopeptide TPR_2 repeat protein [Sinorhizobium medicae WSM419] Length = 175 Score = 39.3 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 47/139 (33%), Gaps = 10/139 (7%) Query: 6 GRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDS-VTDVRYQREVYEKA 64 GR + + + AL I ++ + E SS DV S VT R ++ Sbjct: 9 GRMVLCRPRGTRRTTELALAIVSAVLLSSCQTSEVLSSADVDPTSAVTGGDVSRSDLDQG 68 Query: 65 VLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 L N+ A ++F ++L+ A G++ A + + Sbjct: 69 KLQFMNGNYGLAEKHFREAVELR----RDNAEALMGLAACYDRLGRFDLADRTYSQLLKV 124 Query: 124 YPESK----NVDYVYYLVG 138 N+ Y +YL G Sbjct: 125 AGRQPRIVNNMGYSHYLRG 143 >gi|116749963|ref|YP_846650.1| TPR repeat-containing serine/threonin protein kinase [Syntrophobacter fumaroxidans MPOB] gi|116699027|gb|ABK18215.1| serine/threonine protein kinase with TPR repeats [Syntrophobacter fumaroxidans MPOB] Length = 850 Score = 39.3 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 28/100 (28%), Gaps = 4/100 (4%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + R + +FL + ++ A ++ C P + L Q Sbjct: 573 NNRAAEVYFNMGFIFLMQGDYDAAMTHYEACRALNP--PYQDEVLTNLGMCHLKKKNPAQ 630 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 A L + + P + YL G+ D Sbjct: 631 ALELFRQALDLNPSNSVAK--SYLAGLPAPTQDASPGQDP 668 >gi|325268976|ref|ZP_08135597.1| hypothetical protein HMPREF9141_0806 [Prevotella multiformis DSM 16608] gi|324988597|gb|EGC20559.1| hypothetical protein HMPREF9141_0806 [Prevotella multiformis DSM 16608] Length = 852 Score = 39.3 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 31/101 (30%), Gaps = 18/101 (17%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 +CFL+ S + + DV ++Y ++ N+ +A + + + Sbjct: 608 LCFLLVCLSVCSLQLSAQTKADV---DKMY-------QKGNYQQAVRGYEKLLKQ----- 652 Query: 92 VARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + L Y A E P +++ Sbjct: 653 -GESAALYYNLGNSYYRLDNIPHAVLSYERAQLLAPSDEDI 692 >gi|289548108|ref|YP_003473096.1| peptidase M48 Ste24p [Thermocrinis albus DSM 14484] gi|289181725|gb|ADC88969.1| peptidase M48 Ste24p [Thermocrinis albus DSM 14484] Length = 416 Score = 39.3 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 43/148 (29%), Gaps = 31/148 (20%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y G + A E I Y + + VY GM A+M R K L Y+ Sbjct: 273 YYQKGDLRTALLYMERAIRLYDRN-YMARVY--AGMILARMGRG--------KDALSYVE 321 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 R N + I Y + Y+ R + ++ +Y D Sbjct: 322 RAYREMPQ-----------VFSTNYAYGYVLFITGDYPRSVNYL---RRARDLIPSYPDT 367 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVS 251 L Y A+ + A E Sbjct: 368 Y------YYLGRCYEAMGDSERAVENYR 389 >gi|284055012|ref|ZP_06385222.1| tetratricopeptide TPR_2 [Arthrospira platensis str. Paraca] Length = 352 Score = 39.3 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 21/115 (18%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARK-SLLMSAFVQYSAGKYQQAASLG 117 Y + + +A +++ ++ P F + +LLMS G++++A Sbjct: 255 YGRGNALSSLSQYDEAIASYDRATQLQPNFHPAWRDRGALLMSI------GRHEEALQAF 308 Query: 118 EEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + + P+ DY ++YL G + D P + +R + + Sbjct: 309 DRLLQIQPD----DYGIWYLRGNILMNHLDDYP-------EAAKSYTRAINIKPD 352 >gi|251789345|ref|YP_003004066.1| tetratricopeptide repeat-containing protein [Dickeya zeae Ech1591] gi|247537966|gb|ACT06587.1| Tetratricopeptide domain protein [Dickeya zeae Ech1591] Length = 389 Score = 39.3 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 60/184 (32%), Gaps = 34/184 (18%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ + +A E F Q + F A + L+ S + A E+ + Sbjct: 114 GRDYMVAGLYDRAEEIFKQLVDEEDFRVSALQ-QLLQI--HQSTSDWPNAIDTAEKLVKL 170 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 G + Q+ ++ + + LQ M S + A + Sbjct: 171 --------------GKT--QLRSEIAHF--YCEQALQAM--------GSDDLDKAVAMLK 204 Query: 184 VGR---NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 +Q A + +GR Y+ + Y A+ Q VL D E E + L E Y L Sbjct: 205 KASATDSQCARVSIMLGRIYMAQQNYPQAVAMLQQVLD--QDTELVSETLPLLQECYRYL 262 Query: 241 ALMD 244 + Sbjct: 263 QQPE 266 >gi|261420507|ref|YP_003254189.1| hypothetical protein GYMC61_3150 [Geobacillus sp. Y412MC61] gi|319768176|ref|YP_004133677.1| hypothetical protein GYMC52_3178 [Geobacillus sp. Y412MC52] gi|261376964|gb|ACX79707.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. Y412MC61] gi|317113042|gb|ADU95534.1| Tetratricopeptide repeat protein [Geobacillus sp. Y412MC52] Length = 490 Score = 39.3 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 15/100 (15%) Query: 48 LDSVTDVRYQREVY---EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAF 102 LD + ++ ++A L+E+ F++A E +P ++ A Sbjct: 138 LDGSEWTEEEEQLMVLEDRARRLLEEERFAEAIEALEALVARYPDVWSAHN-----NLAL 192 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNV-----DYVYYLV 137 + +G +A E + + P + + + YYL Sbjct: 193 AYFYSGDVDKAKQKVREVLKRDPGNLHALCNALVFAYYLR 232 >gi|162454435|ref|YP_001616802.1| exported transglycosylase [Sorangium cellulosum 'So ce 56'] gi|161165017|emb|CAN96322.1| exported transglycosylase [Sorangium cellulosum 'So ce 56'] Length = 773 Score = 39.3 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 34/89 (38%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 R +++ A + + ++A E +R F S L++A + G+Y Sbjct: 334 PSARQAEQLHLAARSLSRLRREAEAIERHLAVARRFRKTRWGELSSLLAARLLMQVGRYA 393 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMS 140 +A + ++ YP S Y ++ Sbjct: 394 EAVAQYGRFLDAYPRSDRRGDAAYERALA 422 >gi|145512772|ref|XP_001442298.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124409633|emb|CAK74901.1| unnamed protein product [Paramecium tetraurelia] Length = 1421 Score = 39.3 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 55/158 (34%), Gaps = 31/158 (19%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y + + F +A E F + ++ P + A + Y+ AA E+ Sbjct: 1277 YYNLGDTYFTMEKFEEALECFEKVVKNDPQHS---AAFYNYANTFFVLEDYENAAKYFEK 1333 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I P+ NVD+ Y+ + I+ +Q +++ + N+P Sbjct: 1334 AIELQPQ--NVDWRNYVAQL----YIKKCDLNQ-----AKRHLDESIRLQPNNP------ 1376 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + LA YY + G Y A+ + + L Sbjct: 1377 -------DTLAKY----ANYYYQIGNYQEALQKAKQTL 1403 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ A + + Q+F++A Y+ + + + K+ A AG+ QQA + ++ Sbjct: 121 LFNIASTYYEMQDFTQAIIYYQKLIQVNKVSDY--KAYFNLAMCYEKAGENQQALEMYKQ 178 Query: 120 YITQYPE 126 I P Sbjct: 179 SIRINPN 185 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 31/92 (33%), Gaps = 11/92 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKY 110 D ++ Y A F +++ A +YF + P R + L Sbjct: 1304 DPQHSAAFYNYANTFFVLEDYENAAKYFEKAIELQPQNVDWRNYVAQL-----YIKKCDL 1358 Query: 111 QQAASLGEEYITQYPESKN--VDYV--YYLVG 138 QA +E I P + + Y YY +G Sbjct: 1359 NQAKRHLDESIRLQPNNPDTLAKYANYYYQIG 1390 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 23/202 (11%), Positives = 61/202 (30%), Gaps = 40/202 (19%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMS--AFVQYSAGKYQQAASLGEEYITQYPESKN 129 F +A + + + + + + L A Y +++A + ++ S Sbjct: 1222 QFEQAIQIYEEI------SHLDQNEELEQHMANCYYKKNDFEEAVLHYQRALSIN--SDK 1273 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS--------------PYV 175 ++ YY +G +Y M + + L+ ++V+ Sbjct: 1274 IE-CYYNLGDTYFTMEK--------FEEALECFEKVVKNDPQHSAAFYNYANTFFVLEDY 1324 Query: 176 KGARFYVTVGRNQLAAK---EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 + A Y + + Y+K+ + A + + + +A+ Sbjct: 1325 ENAAKYFEKAIELQPQNVDWRNYVAQLYIKKCDLNQAKRHLDESIRLQPN---NPDTLAK 1381 Query: 233 LVEAYVALALMDEA-REVVSLI 253 Y + EA ++ + Sbjct: 1382 YANYYYQIGNYQEALQKAKQTL 1403 >gi|116283802|gb|AAH30849.1| Ttc38 protein [Mus musculus] Length = 475 Score = 39.3 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 19/123 (15%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA---- 101 V L + + +++ AV + NF +A + + Q RD P M A Sbjct: 112 VELSQTQTLTPREQLHVSAVEMFAKGNFPRACDLWEQILRDHPTD--------MLALKFS 163 Query: 102 -FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYD--QRATKL 157 + G +Q YP + ++ Y+ G+ ++ YD Q+ K Sbjct: 164 HDAYFYLGYQEQMRDSVAR---VYPFWTPDIPLNSYVKGIYSFGLMETNFYDQAQKLAKE 220 Query: 158 MLQ 160 L Sbjct: 221 ALS 223 >gi|325180731|emb|CCA15138.1| cell division cycle protein 16 putative [Albugo laibachii Nc14] Length = 768 Score = 39.3 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 3/56 (5%) Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE---AMARLVEAYVALALMDEAR 247 EIG Y K+ Y +A+ Q L + + + L AY L EA Sbjct: 623 EIGVVYYKQKRYTSAVESLQEALQACPNTASKQTFSVTLFNLASAYRKLGRYQEAE 678 >gi|301607764|ref|XP_002933468.1| PREDICTED: TPR and ankyrin repeat-containing protein 1-like [Xenopus (Silurana) tropicalis] Length = 2877 Score = 39.3 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 7/76 (9%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + A + +Q F ++L A + K+ +A I +N+ Sbjct: 39 YDDAIGFLSQIVHLGNFQK--ELAILWCNRANALFKLEKWDEALISATRSIRLN--HRNI 94 Query: 131 DYVYYLVGMSYAQMIR 146 YY G+S+ ++ Sbjct: 95 K-AYYRSGISFIKLHD 109 >gi|300871488|ref|YP_003786361.1| hypothetical protein BP951000_1881 [Brachyspira pilosicoli 95/1000] gi|300689189|gb|ADK31860.1| hypothetical protein BP951000_1881 [Brachyspira pilosicoli 95/1000] Length = 1158 Score = 39.3 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 68/212 (32%), Gaps = 41/212 (19%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYSA--GKYQQAAS-LGE 118 A L + +F A + F + + L S + Y A Y +A L Sbjct: 835 AKYLLDKDDFYGARKLFEKLLAKYTNN-------LESIVGYADYEARLKHYDRAKEILIN 887 Query: 119 EYITQYPESK-NV--DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + Y + NV +YVY ++G Y + + + +E+ NS Y Sbjct: 888 SALPLYTSNPYNVGEEYVYNMLGQIYYNL--------KEYGSAINNFKLALEK--NSLY- 936 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY-SDAEHAEEAMARLV 234 A F + Y+ + +Y A +++ N D ++ + L Sbjct: 937 PDANFNLANL-------------YFYQDNDYKKAKEHYKIAYDNLAPDLRS-DQLLYNLS 982 Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYV 266 Y D A + + + + P Y Sbjct: 983 WLYYLDGEYDLAFQGFNDLFYKNPDNSIVSYA 1014 >gi|206603160|gb|EDZ39640.1| Protein of unknown function [Leptospirillum sp. Group II '5-way CG'] Length = 719 Score = 39.3 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 13/129 (10%) Query: 60 VYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +YE+A + L + +A + +P+ ++ + G +++A +L Sbjct: 216 LYERARIALDQDRVPEAGSFLTRALALDGVYPY-KHPEDLFTLALYAD-RKGHHRRAFAL 273 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 E+ ES V Y +G+ ++ + M + +V Y + + Sbjct: 274 YREFRRFGSESPLVPEALYRMGILSGKL--------GKPRSMEARLLEVVHEYPTTRWAD 325 Query: 177 GARFYVTVG 185 AR + Sbjct: 326 RARLEIARL 334 >gi|198414401|ref|XP_002127526.1| PREDICTED: similar to Serine/threonine-protein phosphatase 5 (PP5) (Protein phosphatase T) (PP-T) (PPT) [Ciona intestinalis] Length = 492 Score = 39.3 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 46/153 (30%), Gaps = 35/153 (22%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGK 109 +D + E+A K++ + +A + + + P + A +S F Sbjct: 15 SDRLKAEKFKEEANHLFKDKKYEEAIDLYTKAIEVNPKSAVYHANRS-----FANLRLEN 69 Query: 110 YQQAASLG-------EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y A ++YI YY +Y + KL L+ + Sbjct: 70 YGFALEDATTAISCDKKYIK----------AYYRRASAYMSL--------GKFKLALRDL 111 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 IV+ AR T + K E Sbjct: 112 EAIVKVRPTDK---DARMKYTACSKIVKQKAFE 141 >gi|170078306|ref|YP_001734944.1| TPR repeat-containing protein [Synechococcus sp. PCC 7002] gi|169885975|gb|ACA99688.1| TPR-repeat containing protein [Synechococcus sp. PCC 7002] Length = 577 Score = 39.3 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 14/112 (12%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + DV+ D Y + Y +A+ ++ +A N+ + + + S Sbjct: 466 SLDPNDDVFYRLRGDSYYCLKKYSEAIE-----DYGEAIR-LNKLIKLYLNSEYHNCSGY 519 Query: 99 --MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 M Y KY +A E + P+++N Y + I+ + Sbjct: 520 YNMRGVACYRLEKYTEALQDFENALRLNPQNQNSIY------LDNKNQIKKI 565 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 7/78 (8%) Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY-LVGMSYAQMIRDVPYDQRATK 156 L Y GKY+ A + + I+ P D V+Y L G SY + + Sbjct: 442 LDLGLTHYDMGKYEFAITDFSKAISLDPN----DDVFYRLRGDSYYCLKKYSEAI-EDYG 496 Query: 157 LMLQYMSRIVERYTNSPY 174 ++ ++++++ Y NS Y Sbjct: 497 EAIR-LNKLIKLYLNSEY 513 >gi|78223197|ref|YP_384944.1| hypothetical protein Gmet_1990 [Geobacter metallireducens GS-15] gi|78194452|gb|ABB32219.1| conserved hypothetical protein [Geobacter metallireducens GS-15] Length = 175 Score = 39.3 bits (91), Expect = 0.54, Method: Composition-based stats. Identities = 8/57 (14%), Positives = 23/57 (40%), Gaps = 4/57 (7%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFL----KEQNFSKAYEYFNQCSRDFPFAGVARKS 96 +V ++ A+L + ++ + A +Y + +++P + A +S Sbjct: 58 EEVVAAQGVRGITDEALFRLALLSMPSDLNREDLANAVKYLERLQKEYPVSPWATQS 114 >gi|251772450|gb|EES53017.1| putative TPR-domain containing protein [Leptospirillum ferrodiazotrophum] Length = 724 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 63/226 (27%), Gaps = 33/226 (14%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 R ++ ++++ + + + P + + ++LL A Sbjct: 145 RQAEKAPPPGWDKGEVLFRMGQYLVRKRFGVEGRGLLERLRSENPQSPWSYRALLSIADS 204 Query: 104 QYSAGKYQQA-----ASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATK 156 G +A + E + P SK+ D + YL G + ++ R D Sbjct: 205 YREKGDLPRAEKRLLMADPERFPV--PVSKD-DRLRWLYLAG--HLKLDRG---DILGAG 256 Query: 157 LMLQYMSRIVERYTNSPYV-KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + Y Y A +GRY + + A+ F+ Sbjct: 257 EDFLAALSLSHDYP---YAHPEAL--------------FLLGRYAYRAHHDLRAVTLFRR 299 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + + AM L D + + + P Sbjct: 300 FIRLFPNDSRLSLAMYYRARLSGRLGHPDREKGRLRELTMDEPGTP 345 >gi|260825355|ref|XP_002607632.1| hypothetical protein BRAFLDRAFT_84679 [Branchiostoma floridae] gi|229292980|gb|EEN63642.1| hypothetical protein BRAFLDRAFT_84679 [Branchiostoma floridae] Length = 519 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 4/74 (5%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLM-SAFVQYSAGKYQQAASL 116 +E +L +Q+F + + F P + + ++L A+ Y ++A Sbjct: 180 FEVGLLAYNDQDFYHVALWMEESLARFQPDPTSEHTKDAILDHLAYASYRLNNIERAYQA 239 Query: 117 GEEYITQYPESKNV 130 +E + PE N Sbjct: 240 TKELLRVNPEHSNA 253 >gi|149277323|ref|ZP_01883465.1| hypothetical protein PBAL39_10546 [Pedobacter sp. BAL39] gi|149232200|gb|EDM37577.1| hypothetical protein PBAL39_10546 [Pedobacter sp. BAL39] Length = 268 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 4/75 (5%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +G + +K G++ AI RFQ ++ + +A L AY L EA E Sbjct: 189 MSLGTFAMKSGQFDKAIVRFQDIIKIKP----SPDAYFYLATAYENLGKDAEAIEAYEKS 244 Query: 254 QERYPQGYWARYVET 268 ++ +++V+ Sbjct: 245 KKLAANATLSKFVDD 259 >gi|84996545|ref|XP_952994.1| transcription factor [Theileria annulata strain Ankara] gi|65303990|emb|CAI76369.1| transcription factor, putative [Theileria annulata] Length = 882 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 25/71 (35%), Gaps = 7/71 (9%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI-- 121 + + N +A F +C R+ + +++ A Y+ A + ++ Sbjct: 146 GEMSQESGNLDQAIYCFKKCQRNQE-GQINEQAVFALAICYIEKKDYENA---AKRFLVL 201 Query: 122 -TQYPESKNVD 131 +P K + Sbjct: 202 FNLHPNDKLIA 212 >gi|89094849|ref|ZP_01167782.1| Peptidase family M48 family protein [Oceanospirillum sp. MED92] gi|89080904|gb|EAR60143.1| Peptidase family M48 family protein [Oceanospirillum sp. MED92] Length = 478 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 6/79 (7%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 KA + + + N+S A + ++ + +P A A + +A+ + E+ + Sbjct: 341 KAEIAMAQMNYSSAVKTLSKLMQVYP-GNHA--VSFTYADALLKMEQPSKASQVYEDLVE 397 Query: 123 QYPESKNVDYVYYLVGMSY 141 + P +YL+ SY Sbjct: 398 RNPNDSR---AWYLLAESY 413 >gi|284036927|ref|YP_003386857.1| hypothetical protein Slin_2013 [Spirosoma linguale DSM 74] gi|283816220|gb|ADB38058.1| hypothetical protein Slin_2013 [Spirosoma linguale DSM 74] Length = 597 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 47/110 (42%), Gaps = 5/110 (4%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 F + LV S+ V+ +D ++ Y+ A+ ++ ++ +A N + Sbjct: 5 FLLLTRTVLVCCGLLCSQLVWAQLTSD---AQKRYKAALELVRTGDYERAKSDLNVLIQQ 61 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 +A + A + KY Q+ ++ ++ + QYP+ + +D YL Sbjct: 62 R--GPLAPYAAYHYAIAAFRQRKYPQSRAMLKQLMEQYPDWQKMDDANYL 109 >gi|289207813|ref|YP_003459879.1| peptidase M48 Ste24p [Thioalkalivibrio sp. K90mix] gi|288943444|gb|ADC71143.1| peptidase M48 Ste24p [Thioalkalivibrio sp. K90mix] Length = 480 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 51/181 (28%), Gaps = 26/181 (14%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 + R + + ++Y V L+ +A E + A L Sbjct: 284 KDPRRAIEIHRGASDPAPHQIYGAMVAHLERGELDRAAERLEEIPV-----EEAPGMTLE 338 Query: 100 SAFVQY--SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 A G ++ A + + YP + V D Sbjct: 339 LARGALERERGNHEAALEILNDLDAVYPGHPVIREVL-----------ARAHRDLDNPDR 387 Query: 158 MLQYMSRIV--ERYTNSP------YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 ++ ++ ++ ER N + Y+ + R +A +Y ++ AA Sbjct: 388 AIRIVNEMIRNERAPNPELLRLKADIADGAGYIAISREAMAEYFFHRAQYEESVRQFEAA 447 Query: 210 I 210 I Sbjct: 448 I 448 >gi|189183138|ref|YP_001936923.1| TPR repeat-containing protein 03 [Orientia tsutsugamushi str. Ikeda] gi|189179909|dbj|BAG39689.1| TPR repeat-containing protein 03 [Orientia tsutsugamushi str. Ikeda] Length = 502 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 59/186 (31%), Gaps = 37/186 (19%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 Y K + + + +A E F+ + + K+ L Y +YQ+A Sbjct: 314 PDTYYNKGACLYELRQYQEAVENFDLAIK---YNPNFEKAYLSKGACLYELRQYQEAIEC 370 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 I P YY G+ ++ + + ++ ++ N YV Sbjct: 371 CNLAIKYNPND---AEAYYNKGVCLFKLGQH--------QAAVENYDLAIKYNPN--YV- 416 Query: 177 GARFYVTVGRNQLAAKEVEIGRY-------------YLKRG-------EYVAAIPRFQLV 216 A + + ++L + + + Y +G +Y AAI F L Sbjct: 417 DAYYNKGLCLSKLGQAQEAVENFNLAIKYNPNDAEAYYNKGLCLYELRQYQAAIANFDLA 476 Query: 217 LANYSD 222 + + Sbjct: 477 IKYDPN 482 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 33/123 (26%), Gaps = 28/123 (22%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG----KYQQ 112 Y K V K A E ++ + P Y+ G K Q Sbjct: 382 AEAYYNKGVCLFKLGQHQAAVENYDLAIKYNP----------NYVDAYYNKGLCLSKLGQ 431 Query: 113 AASLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 A E + I P YY G+ ++ R + + ++ Sbjct: 432 AQEAVENFNLAIKYNPND---AEAYYNKGLCLYEL--------RQYQAAIANFDLAIKYD 480 Query: 170 TNS 172 N+ Sbjct: 481 PNN 483 >gi|307210931|gb|EFN87246.1| Tetratricopeptide repeat protein 26 [Harpegnathos saltator] Length = 1038 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 46/150 (30%), Gaps = 28/150 (18%) Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS----PYVKGARFYVTVGRNQLA 190 Y ++ + ++ Y + L + Y S ++ + LA Sbjct: 534 YKRAVTVYENLKKRDYVPPDVRTNLACCYFYLGMYPESQKILEEAADSKLRTRLLF-HLA 592 Query: 191 AK--------------------EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 K ++ + + R Y AI ++ +L + D Sbjct: 593 HKMGNESKLKEYHQMLQDVIEDQLSLASIHYLRAHYQEAIDVYKRILLDNRDYLALN--- 649 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQG 260 + Y L D A+EV+ + ++YP Sbjct: 650 VYVALCYYKLDYYDVAQEVLQVYLQKYPDS 679 >gi|301759032|ref|XP_002915381.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-3-like [Ailuropoda melanoleuca] Length = 539 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 19/131 (14%) Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70 + + + + A +F +A + D+Y + ++ + Sbjct: 138 LQDVYMLNVKGLARGVFQRVAGSAVT--------DLYSPRRLFSLTADDCFQVGKVAYDM 189 Query: 71 QNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ A + + F + +L AF + AG A SL E++ Sbjct: 190 GDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFQAGNVSCALSLSREFL 249 Query: 122 TQY-PESKNVD 131 Y P++K + Sbjct: 250 -LYSPDNKRMA 259 >gi|194386088|dbj|BAG59608.1| unnamed protein product [Homo sapiens] Length = 482 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 15/101 (14%) Query: 104 QYSAGKYQQAASLGEEYITQYP------ESKNVDYVYYLVGMSYAQMIRDVPYD---QRA 154 + A Y+ A + I P ++++ YL Y + D + Sbjct: 38 YFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLA---YLRTECYGNALGDATRAIELDKK 94 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + L+ +V+ + A+ + K E Sbjct: 95 FRAALRDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 132 >gi|187956968|gb|AAI57956.1| Cdc27 protein [Mus musculus] gi|219521189|gb|AAI72100.1| Cdc27 protein [Mus musculus] Length = 830 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 592 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 641 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 642 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 697 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 698 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 752 Query: 237 YVALALMDEA 246 Y L A Sbjct: 753 YKKLGQTHLA 762 >gi|124024560|ref|YP_001018867.1| hypothetical protein P9303_28721 [Prochlorococcus marinus str. MIT 9303] gi|123964846|gb|ABM79602.1| Hypothetical protein P9303_28721 [Prochlorococcus marinus str. MIT 9303] Length = 706 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 12/113 (10%), Positives = 32/113 (28%), Gaps = 20/113 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + +++ A +N+ + R + + G YQ A + Sbjct: 389 NRGNTKKQLKDYQGAIADYNKAIELDPQHAYGYYNR------GLAKKNLGDYQGAIADYN 442 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + IT P+ + + T+ + ++ +E Sbjct: 443 KAITINPQHADA-----------FNNRGNAKDGLGDTQGAISDYNKAIELDPQ 484 >gi|52549469|gb|AAU83318.1| O-linked GlcNAc transferase [uncultured archaeon GZfos27E6] Length = 206 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 10/69 (14%), Positives = 26/69 (37%), Gaps = 3/69 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + +++ + +A FN+ + P +A Y +Y++A +E + Sbjct: 127 NEGEALFEQKKYDEAIRCFNEAIKLNPSYELAWN---NKGTALYMLKRYKEAIKCFDEVL 183 Query: 122 TQYPESKNV 130 P ++ Sbjct: 184 KNNPNNETA 192 >gi|13324600|gb|AAK18803.1|AF305611_1 LMP1 [Borrelia burgdorferi N40] gi|312149145|gb|ADQ29216.1| Surface-located membrane protein 1 (LMP1) [Borrelia burgdorferi N40] Length = 849 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117 + ++ NF ++ EY N F A+K ++ + ++ K +++ Sbjct: 611 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 664 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175 + I P + +Y YL + + + S ++E+ S Y+ Sbjct: 665 NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 713 Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222 A+ Y G A +E +G Y K Y AI F+ + N Sbjct: 714 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 770 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259 EA L + + A++++ ++ P+ Sbjct: 771 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 808 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK++N+ A ++ P + + A +G QA S E+ Sbjct: 678 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 734 Query: 120 YI 121 I Sbjct: 735 II 736 Score = 35.5 bits (81), Expect = 9.3, Method: Composition-based stats. Identities = 11/124 (8%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + ++ D + + + A + + KA + + + ++ + Sbjct: 462 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNTQEDHYKLGII 514 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 ++ KY+ + ++ I P+ K + G++ + ++ K ++ Sbjct: 515 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 563 Query: 164 RIVE 167 + ++ Sbjct: 564 KAIQ 567 >gi|123243012|emb|CAM22622.1| cell division cycle 27 homolog (S. cerevisiae) [Mus musculus] Length = 831 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 593 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 642 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 643 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 698 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 699 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 753 Query: 237 YVALALMDEA 246 Y L A Sbjct: 754 YKKLGQTHLA 763 >gi|116625046|ref|YP_827202.1| peptidase C14, caspase catalytic subunit p20 [Candidatus Solibacter usitatus Ellin6076] gi|116228208|gb|ABJ86917.1| peptidase C14, caspase catalytic subunit p20 [Candidatus Solibacter usitatus Ellin6076] Length = 688 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 13/122 (10%), Positives = 41/122 (33%), Gaps = 21/122 (17%) Query: 55 RYQREVYEKAVLFLKEQ---NFSKAYEYFNQCSRDFPFAGVARKS-LLMSAF-VQYSAGK 109 + ++ ++ + + ++ KA F P ++ + L + + Sbjct: 384 KAALDLLQQGLREYHKGAEQDYKKAAAIFENALAADP--SYSQAAFYLGLTYSALF---D 438 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y++A + + I P+ YL + + D ++ ++ +++R Sbjct: 439 YEKAGAAYKRAIQLDPD--------YLEAHANY---GGMLLDTGDVDEAIRQLNTVLQRE 487 Query: 170 TN 171 Sbjct: 488 PK 489 >gi|186681642|ref|YP_001864838.1| hypothetical protein Npun_F1170 [Nostoc punctiforme PCC 73102] gi|186464094|gb|ACC79895.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC 73102] Length = 307 Score = 39.3 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 53/165 (32%), Gaps = 40/165 (24%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 L++ +++ + ++ FL + S+T + + E V ++ ++ + Sbjct: 1 MSNLWRLFISVIIAFSLTFLTLSAHSA-----PVSITQITASNFL-ELGVDKMRRGSYQE 54 Query: 76 AYEYFN---QCSRDFP----------------------------FAGVARKSLLMSAFVQ 104 A E FN + +DF FA ++ L Sbjct: 55 AIESFNQAIEVEKDFAVAYSDRCLAYLQLQDYHQAIADCTQAINFAPNHSEAYLNRGLAL 114 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 Y G Y A + I P YY G+++A +D Sbjct: 115 YRQGDYSGAIVDYNQAIALKPSDFR---AYYNRGLAFAGDGKDSE 156 >gi|195941941|ref|ZP_03087323.1| surface-located membrane protein 1 [Borrelia burgdorferi 80a] Length = 957 Score = 39.3 bits (91), Expect = 0.56, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117 + ++ NF ++ EY N F A+K ++ + ++ K +++ Sbjct: 719 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 772 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175 + I P + +Y YL + + + S ++E+ S Y+ Sbjct: 773 NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 821 Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222 A+ Y G A +E +G Y K Y AI F+ + N Sbjct: 822 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 878 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259 EA L + + A++++ ++ P+ Sbjct: 879 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 916 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK++N+ A ++ P + + A +G QA S E+ Sbjct: 786 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 842 Query: 120 YI 121 I Sbjct: 843 II 844 Score = 35.5 bits (81), Expect = 9.2, Method: Composition-based stats. Identities = 11/124 (8%), Positives = 43/124 (34%), Gaps = 18/124 (14%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + ++ D + + + A + + KA + + + ++ + Sbjct: 570 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNTQEDHYKLGII 622 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 ++ KY+ + ++ I P+ K + G++ + ++ K ++ Sbjct: 623 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 671 Query: 164 RIVE 167 + ++ Sbjct: 672 KAIQ 675 >gi|159477839|ref|XP_001697016.1| hypothetical protein CHLREDRAFT_184916 [Chlamydomonas reinhardtii] gi|158274928|gb|EDP00708.1| predicted protein [Chlamydomonas reinhardtii] Length = 258 Score = 39.3 bits (91), Expect = 0.56, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 17/142 (11%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGK 109 T + YE V+ +++ F++A + + + + + + + F ++ K Sbjct: 129 TGEATCEDYYELGVVLTRKKLFTQATKNLEKAKKVW-DGEESELAQVHNALGFCYFNMEK 187 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 A + P YV + + D +R LQ + Sbjct: 188 TDMAIEEYRLAVALQPG-----YV------TAWNNLGDALEKERRWPEALQAYQEALTYA 236 Query: 170 TNSPYVKGARFYVTVGRNQLAA 191 N+ AR + +++ Sbjct: 237 PNNR---IARQRCDYCKEKVSR 255 >gi|47230441|emb|CAF99634.1| unnamed protein product [Tetraodon nigroviridis] Length = 1210 Score = 39.3 bits (91), Expect = 0.56, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 74/209 (35%), Gaps = 38/209 (18%) Query: 69 KEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 + NF +A ++F + ++D P + L A ++ E + Q P Sbjct: 596 DKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFERILKQ-P 648 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSPYVKGA--- 178 ++N Y +G + Q + D+ R L +++ + Y Sbjct: 649 STQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGA 708 Query: 179 ----RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLA---NYS 221 + Y R+ A +E + + Y+++ +Y++A+ ++ L Y Sbjct: 709 VLAHKGYYREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQ 768 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVV 250 + E + L A + E ++++ Sbjct: 769 NT----EVLLYLARALFKCGKLQECKQML 793 >gi|150018780|ref|YP_001311034.1| TPR repeat-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149905245|gb|ABR36078.1| TPR repeat-containing protein [Clostridium beijerinckii NCIMB 8052] Length = 396 Score = 39.3 bits (91), Expect = 0.56, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 51/176 (28%), Gaps = 48/176 (27%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-----NQCSRDFPFAGVA 93 + S D + S + + ++A +++ + A E D Sbjct: 242 AKIDSEDQKVKSDSYKNNILGMLDEAEKSIRDGKYEIAAEDLINVKNENLDND------- 294 Query: 94 RKSLLMS------------AF----VQYSAGKYQQA------ASLGEEYITQYPESKNVD 131 K+ + Y KY +A S + I + Sbjct: 295 TKAKFDKLWQDLKISGLWPIYNDGNKLYKQKKYAEALPKLKMISQIDSDIDI------MP 348 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 ++ Y +G Y + I D L Y ++ ++Y + Y A + + N Sbjct: 349 WLMYQIGTCY-KEINDYS-------NALIYFRQVKDKYPKTEYASYADYSMKEMGN 396 >gi|322514505|ref|ZP_08067542.1| lipopolysaccharide N-acetylglucosaminyltransferase [Actinobacillus ureae ATCC 25976] gi|322119575|gb|EFX91653.1| lipopolysaccharide N-acetylglucosaminyltransferase [Actinobacillus ureae ATCC 25976] Length = 395 Score = 39.3 bits (91), Expect = 0.56, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 75/197 (38%), Gaps = 32/197 (16%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LD+ ++++ K A F+ + +A Y+ + + A SL + Sbjct: 103 LDASPHYSIEKKLLAKQQLAKDFMAAGFYDRAENYYILLLDE---SEFAVNSLTQLMVIY 159 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++++A ++ E+ + P++ V +Y Y + + + + L + + Sbjct: 160 QKTKEWKKAINVSEKLLKIEPDTDKVPLAHY-----YCEYAQTIKT--ENVEEHLNALKK 212 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +E A + +G YYL++ ++ A+ F+ ++ D Sbjct: 213 ALEYSP-----------------LCARASILLGDYYLEQYQFKQALVHFEHLVV--QDPS 253 Query: 225 HAEEAMARLVEAYVALA 241 + E + ++ Y+AL Sbjct: 254 YISEVLNKIKACYIALN 270 >gi|269849702|sp|Q8X5M0|BCSC_ECO57 RecName: Full=Putative cellulose synthase operon protein C; Flags: Precursor Length = 1154 Score = 39.3 bits (91), Expect = 0.56, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 440 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 496 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 497 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 553 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + + +V R S V + G+ A ++ + Sbjct: 554 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 607 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + L+R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 608 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 660 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 353 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 409 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 410 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 455 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 456 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 504 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 505 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 534 >gi|196249357|ref|ZP_03148055.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. G11MC16] gi|196211114|gb|EDY05875.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. G11MC16] Length = 490 Score = 39.3 bits (91), Expect = 0.56, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 41/115 (35%), Gaps = 15/115 (13%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 E+A L+++ F++A E +P ++ A + G ++A E Sbjct: 155 ERARHLLEQERFAEAIEALEAIVSRYPEFWSAHN-----NLALAYFYNGDVERAKQKLLE 209 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + + P + L + A + +DQ + + ++ + + Y Sbjct: 210 VLKRDPGN--------LHALCNALVFAYYLHDQEEVAALCETLASVYPFFREHQY 256 >gi|319426862|gb|ADV54936.1| von Willebrand factor type A [Shewanella putrefaciens 200] Length = 663 Score = 39.3 bits (91), Expect = 0.56, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 37/130 (28%), Gaps = 33/130 (25%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A+ + Q++S A + F QY AG Y+QA E+ Sbjct: 359 QQAMQAYQSQDYSNAAKQFESPQWR--------------GSAQYKAGDYEQALKTFEQ-- 402 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + Y G + Q+ + K Q + A+ Sbjct: 403 ------DSSAQGLYNQGNALMQLGK-----PDKAKERYQAALEQQPNFP------DAKAN 445 Query: 182 VTVGRNQLAA 191 + + L Sbjct: 446 LALAEKLLEE 455 >gi|332705864|ref|ZP_08425940.1| serine/threonine protein kinase [Lyngbya majuscula 3L] gi|332355656|gb|EGJ35120.1| serine/threonine protein kinase [Lyngbya majuscula 3L] Length = 614 Score = 39.3 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 22/141 (15%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEY----FNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 Y ++ K ++ QN A + + P A + + + G+Y Sbjct: 492 DYPEALWSKG-AAIESQNTPTAITLALTLYEKAIAIKP--DFA-DAWINRGVALHKLGRY 547 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 ++A I P S + + G + YDQ + M + ++ Sbjct: 548 REAIEAYNRAIKLNPNSAD---AWSNKGAALWAK---REYDQ-----AIDSMEKALQIQP 596 Query: 171 NSPYVKGARFYVTVGRNQLAA 191 N P K R R +L Sbjct: 597 NHPNAKNLRQ---QAREKLGR 614 >gi|297196360|ref|ZP_06913758.1| serine/threonine protein kinase [Streptomyces pristinaespiralis ATCC 25486] gi|297153194|gb|EDY64741.2| serine/threonine protein kinase [Streptomyces pristinaespiralis ATCC 25486] Length = 764 Score = 39.3 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 61/176 (34%), Gaps = 29/176 (16%) Query: 99 MSAFVQYSAGKYQQAASLGE-----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 A+ G++ +A + + T P+ + Y G+ ++ R Sbjct: 561 EMAYALGLMGRWAEALATYQDVAAARAATLGPDHPDTLAARYETGICLGRLGRGA----- 615 Query: 154 ATKLMLQYMSRIVERY-----TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 L +VE + P AR + V +L E + R V+ Sbjct: 616 ---EALDLYRSLVEDRTRVCGPDDPETLRARHGLGVNLGRLGRWEEALAE---ARD--VS 667 Query: 209 AIPRFQLVLANYSDAEHAEE----AMARLVEAYVALALMDE-AREVVSLIQERYPQ 259 A+ R +++ ++ D + A+ L AL + ++ A+E ++ +P Sbjct: 668 AL-RERILGPDHPDTLVSRREVAVALGWLARWAEALGVYEQVAQERERVLGPEHPD 722 >gi|197122379|ref|YP_002134330.1| lytic transglycosylase catalytic [Anaeromyxobacter sp. K] gi|196172228|gb|ACG73201.1| Lytic transglycosylase catalytic [Anaeromyxobacter sp. K] Length = 750 Score = 39.3 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 35/138 (25%), Gaps = 24/138 (17%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ A L + +A E RD P ++ A++ AG A + Sbjct: 343 ADDALFFAADLLARAGKSQEAREALAALVRDHPGGDYREEARFRLAWLLKQAGDLDGAIA 402 Query: 116 LG----------EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + Y E Y + + + + + Sbjct: 403 QLLAVEEEQAGRDGY-----EHARAAY---------WRARLLAGRGEDGRRAAEAVFTEL 448 Query: 166 VERYTNSPYVKGARFYVT 183 RY Y AR + Sbjct: 449 ATRYPTDYYGLLARARLD 466 >gi|194473652|ref|NP_001123971.1| tetratricopeptide repeat protein 38 [Rattus norvegicus] gi|149065694|gb|EDM15567.1| similar to FLJ20699 protein (predicted), isoform CRA_a [Rattus norvegicus] Length = 465 Score = 39.3 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 47/226 (20%), Positives = 74/226 (32%), Gaps = 54/226 (23%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLD---------SVTDVRYQRE-VYEKAVLFLKEQ 71 FA+ + S L+G D LD S T RE ++ AV + Sbjct: 60 FAMGLAIS-NGLVLIGTGTSVKLDKDLDLAVKTMVEFSQTQTLTPRERLHVSAVEMFAKG 118 Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE 126 NF KA E + Q RD P M A + G +Q YP Sbjct: 119 NFPKACELWEQILRDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---VYPF 167 Query: 127 -SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + + Y+ G+ ++ YDQ A KL + +S +E + ++ Sbjct: 168 WTPDTPLSSYVKGIYSFGLMETNFYDQ-AQKLAKEALS--IE--PTDAWSVHTVAHIHEM 222 Query: 186 R--------------------NQLAAKEV-EIGRYYLKRGEYVAAI 210 R + LA Y +++G+Y AA+ Sbjct: 223 RAEIKDGLEFMQHSEGHWKDSDMLACHNYWHWALYLIEKGDYEAAL 268 >gi|34556913|ref|NP_906728.1| flagellar functional protein [Wolinella succinogenes DSM 1740] gi|34482628|emb|CAE09628.1| FLAGELLAR FUNCTIONAL PROTEIN [Wolinella succinogenes] Length = 778 Score = 39.3 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 17/49 (34%) Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 + R V+ +Y A R E Y L + E+ + +P Sbjct: 458 LERLDHVIKSYPGTPEERRAYERKAETYAELGEYPKVLEIERHLDPNHP 506 >gi|260061447|ref|YP_003194527.1| BatE, TRP domain containing protein [Robiginitalea biformata HTCC2501] gi|88785579|gb|EAR16748.1| BatE, TRP domain containing protein [Robiginitalea biformata HTCC2501] Length = 244 Score = 39.3 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 22/85 (25%), Gaps = 7/85 (8%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQY 105 L + ++ KA E + +A Y+ A Y Sbjct: 3 LAAPLGWSQADSLFHKATEAYNEGAYEEAVGYYEAILGDNRHSAALY-----YNLGNAYY 57 Query: 106 SAGKYQQAASLGEEYITQYPESKNV 130 G+ + E+ + P + Sbjct: 58 KMGEIAPSIYYYEKALLLDPADPEI 82 >gi|113475743|ref|YP_721804.1| lytic transglycosylase catalytic subunit [Trichodesmium erythraeum IMS101] gi|110166791|gb|ABG51331.1| Lytic transglycosylase, catalytic [Trichodesmium erythraeum IMS101] Length = 720 Score = 39.3 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 33/234 (14%), Positives = 72/234 (30%), Gaps = 29/234 (12%) Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKS 96 WE+Q L + + +Y A ++ E + FP Sbjct: 237 WEKQDYGKGALAYQKATKTPQNLYRYARGLWLGGKIKESREAYKTLINTFPNGGEDTALG 296 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L+ + + A + I +P + ++++ + +TK Sbjct: 297 LIRLS----RLVDRKDAIPYLDRVIVNFPS--LAPEAL----LDKSKLLDKLD----STK 342 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 +++ Y+NS A + A +++ A Q + Sbjct: 343 SASLLRQQLLREYSNSD--AAAILRWKLAEQAAAGGNLQV------------AWKWAQEL 388 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 N D + A +A + + L ++A + + RYP Y+A ++ Sbjct: 389 TVNNPDHKLAAQAGFWVGKWAQQLGRTEDATKAFEYMILRYPHSYYAWRSAVML 442 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 72/219 (32%), Gaps = 31/219 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A +++ A +++ +A+ L+ A G +A + +E Sbjct: 83 YVLANDLIQQGEAELAIAQLKDLEKEY--ITLAQYILVKRAQAYEQIGDTDKAKRVWQEV 140 Query: 121 ITQYPESKNVDYVYYLVGMSY----AQMIRDVPYDQRATKLMLQYMSR---------IVE 167 + P+ V Y++G + I P K+ + + + ++ Sbjct: 141 LRYDPQEAVVVEALYILGKENPEYWDEAIAKFPGYPATVKIAQEKLKQNPNQPRLLLLIA 200 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEV------EIGRYYLKRGEYVAAIPRFQLVLANYS 221 +Y +V + R + A E+ + Y ++ +Y + LA Y Sbjct: 201 KY--GFHVPEYSTVLEQLRTKYA-SELTPEDWEMVAFGYWEKQDYG------KGALA-YQ 250 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 A + + R + E+RE + +P G Sbjct: 251 KATKTPQNLYRYARGLWLGGKIKESREAYKTLINTFPNG 289 >gi|117923499|ref|YP_864116.1| hypothetical protein Mmc1_0183 [Magnetococcus sp. MC-1] gi|117607255|gb|ABK42710.1| hypothetical protein Mmc1_0183 [Magnetococcus sp. MC-1] Length = 192 Score = 39.3 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 40/144 (27%), Gaps = 31/144 (21%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE------------------ 62 F + +A+ L G L V ++ + Sbjct: 9 SFGRAVALLLALTGLSGCASPGLPMGTLSPTEGVGFRESRFAALEALQNYRQCKQEALTM 68 Query: 63 --KAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFV-----QYSAGKYQQAA 114 +A + + + F QC P + M A+ AG +QA Sbjct: 69 DREARSSGQAARYLASARLFEQCETRLPPGSADVATEERMRAYAVGILDYIKAGDLEQAH 128 Query: 115 SLGEEYITQYPESKNVDYVYYLVG 138 +++ + K+ D YL G Sbjct: 129 VNLDKFRRTF---KDQD--LYLKG 147 >gi|237750111|ref|ZP_04580591.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] gi|229374298|gb|EEO24689.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] Length = 802 Score = 39.3 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 13/90 (14%) Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 + + N + + + G+Y + R+ VLANY + Sbjct: 443 DFLHYHPNDKLAQKVKERDDSLL-------------FQVTGDYKTKLERYNYVLANYPNT 489 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLI 253 E A++A+ + Y+ +E ++ SL+ Sbjct: 490 ESAKKALELKAKLYLENKKYEEILQMQSLL 519 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 43/126 (34%), Gaps = 15/126 (11%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV--QYSAGKYQQ--AASLGEEY 120 + + + +A E + + +P + A+ + + + + Q A + + Sbjct: 199 RELMNARKYPEALEKIAKALKMYPNSLFAKDMVYYTIIALSHSKSKESQSYLAEAAIP-W 257 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I Y + V YL+ + + K Y++R +E Y + Y A Sbjct: 258 IKAYASDDKIPEVMYLLSKTLLAQNK--------MKEAYYYLNRTIEEYPKTRYA--ALS 307 Query: 181 YVTVGR 186 + + Sbjct: 308 KMQIAN 313 >gi|229543734|ref|ZP_04432794.1| TPR repeat-containing protein [Bacillus coagulans 36D1] gi|229328154|gb|EEN93829.1| TPR repeat-containing protein [Bacillus coagulans 36D1] Length = 222 Score = 39.3 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 47/167 (28%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--------FAGV------ARKSL---------- 97 E+ + L+++ + +A ++FN+ D P F V K+ Sbjct: 5 ERGMKALQKKKYDEALKWFNEVIEDNPDDPVGYIHFGDVLLAAGEREKAQNFYRKALALK 64 Query: 98 ------LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-------- 143 +QY G Y+ AA E+ I + K+ Y+++GM + Sbjct: 65 ELPTPFYSLGTIQYEEGHYEAAAGCFEKAIQLGLKDKDT---YFMLGMCFMMLGNPRFAM 121 Query: 144 --MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + R V D+ T+ QY +++ S + A Q Sbjct: 122 PYLQRSVELDEGDTEARFQYALSLIK----SNFADEALKQFQKVLEQ 164 >gi|158523125|ref|YP_001530995.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] gi|158511951|gb|ABW68918.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] Length = 284 Score = 39.3 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 38/151 (25%), Gaps = 25/151 (16%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 + ++ + KA E F + P A + A ++ G Y+ A + + Sbjct: 1 MASVQAGQYDKAVEAFTRVLDLSP--DFAP-AYNNRAAARWDLGDYEGAVADYNRALAIN 57 Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG----ARF 180 P+ D L + R VE + A Sbjct: 58 PDFPE-----------SYNGRGKAFCDMGQMDKALADLDRAVELAPDFADAYNNRGVALR 106 Query: 181 YVTVGRNQLAAKEVEI-------GRYYLKRG 204 LA I +Y RG Sbjct: 107 KTGDFIGALADHSRAIQMRPDRAAEFYNARG 137 >gi|116284342|gb|AAH24550.1| Ttc38 protein [Mus musculus] Length = 471 Score = 39.3 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 19/123 (15%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA---- 101 V L + + +++ AV + NF +A + + Q RD P M A Sbjct: 108 VELSQTQTLTPREQLHVSAVEMFAKGNFPRACDLWEQILRDHPTD--------MLALKFS 159 Query: 102 -FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYD--QRATKL 157 + G +Q YP + ++ Y+ G+ ++ YD Q+ K Sbjct: 160 HDAYFYLGYQEQMRDSVAR---VYPFWTPDIPLNSYVKGIYSFGLMETNFYDQAQKLAKE 216 Query: 158 MLQ 160 L Sbjct: 217 ALS 219 >gi|148255708|ref|YP_001240293.1| TPR repeat-containing protein [Bradyrhizobium sp. BTAi1] gi|146407881|gb|ABQ36387.1| putative TPR repeat protein [Bradyrhizobium sp. BTAi1] Length = 1406 Score = 39.3 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 55/161 (34%), Gaps = 39/161 (24%) Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 AG+Y A E ++ P + Y + + V +Q ++ + + R + Sbjct: 863 AGRYDAAVGHYETALSLSPNHPGILYAFAM-----------VRQNQGMSEEAMVLLRRAI 911 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----------RGEYVA-------- 208 E A + A K++E + YLK +A Sbjct: 912 ENKPQHLDAHFALGNLLYT----AGKDIEAAKCYLKVLEFSPEHAETHNNIANVLLRQGH 967 Query: 209 ---AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 AI ++ +A+ D +A L AY+ L ++EA Sbjct: 968 RERAIEHYKRAIASRPD---YGDAYGNLGNAYLELNRLEEA 1005 >gi|332291862|ref|YP_004430471.1| TPR domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332169948|gb|AEE19203.1| TPR domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 847 Score = 39.3 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%) Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 K EY A R + +LA D + A+ L + Y A+ +A + I YP Sbjct: 565 KFKEYPLAAQRLEKLLAFNPDEKLVLPALYNLYQVYGAMDASAKANIYKNKITAEYPNSR 624 Query: 262 WARYVET 268 +A + Sbjct: 625 YATRINN 631 Score = 35.9 bits (82), Expect = 6.0, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 24/128 (18%) Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + +D + L+G + + VP L+ + ++ Y S + A+ + Sbjct: 114 RNPQMDEAFLLLGKARYYDQQFVP--------ALEAFNYVLAYYPKSNNIAQAKIWKEKT 165 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV--LANYSDAEHAEEAMARLVEAYVALALM 243 +L EV AI + + + + +A A L +AY+ L + Sbjct: 166 NIRLENNEV--------------AIKNLKQIFKVEKNLKDQDIADAHAMLTQAYLNLGIQ 211 Query: 244 DEAREVVS 251 D A + + Sbjct: 212 DSAFQYIQ 219 >gi|320661633|gb|EFX29048.1| cellulose synthase subunit BcsC [Escherichia coli O55:H7 str. USDA 5905] Length = 1157 Score = 39.3 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + + +V R S V + G+ A ++ + Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + L+R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 6.3, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|320639846|gb|EFX09440.1| cellulose synthase subunit BcsC [Escherichia coli O157:H7 str. G5101] gi|320655851|gb|EFX23774.1| cellulose synthase subunit BcsC [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 1157 Score = 39.3 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + + +V R S V + G+ A ++ + Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + L+R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 6.2, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|291284902|ref|YP_003501720.1| Cellulose synthase operon protein C [Escherichia coli O55:H7 str. CB9615] gi|290764775|gb|ADD58736.1| Cellulose synthase operon protein C [Escherichia coli O55:H7 str. CB9615] Length = 1157 Score = 39.3 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + + +V R S V + G+ A ++ + Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + L+R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 6.2, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|209524105|ref|ZP_03272656.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] gi|209495480|gb|EDZ95784.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] Length = 1676 Score = 39.3 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 16/121 (13%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + + E+ + +++++ KA +++ FP A FV G + Sbjct: 12 SPAAQSLAERGLWCQQQKDYGKAVDWYKRALEVYFP---WAE-VHYNLGFVLEKLGDVED 67 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A + + I P N YY +G+ Q R++ + + + Sbjct: 68 AIACYRQAIIHKPNYTN---AYYNLGLILQQSGREI--------EAIAAYQSAIYLEPET 116 Query: 173 P 173 P Sbjct: 117 P 117 >gi|168746931|ref|ZP_02771953.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4113] gi|168753343|ref|ZP_02778350.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4401] gi|168765938|ref|ZP_02790945.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4486] gi|168772515|ref|ZP_02797522.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4196] gi|168779674|ref|ZP_02804681.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4076] gi|168797361|ref|ZP_02822368.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC508] gi|195935058|ref|ZP_03080440.1| cellulose synthase subunit BcsC [Escherichia coli O157:H7 str. EC4024] gi|208808289|ref|ZP_03250626.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4206] gi|208813880|ref|ZP_03255209.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4045] gi|208820438|ref|ZP_03260758.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4042] gi|209396215|ref|YP_002273011.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4115] gi|187771657|gb|EDU35501.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4196] gi|188018261|gb|EDU56383.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4113] gi|189002386|gb|EDU71372.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4076] gi|189359264|gb|EDU77683.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4401] gi|189364597|gb|EDU83016.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4486] gi|189379934|gb|EDU98350.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC508] gi|208728090|gb|EDZ77691.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4206] gi|208735157|gb|EDZ83844.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4045] gi|208740561|gb|EDZ88243.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4042] gi|209157615|gb|ACI35048.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4115] gi|326339997|gb|EGD63804.1| Cellulose synthase operon protein C [Escherichia coli O157:H7 str. 1125] Length = 1157 Score = 39.3 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + + +V R S V + G+ A ++ + Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + L+R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 6.3, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|110331857|gb|ABG67034.1| protein phosphatase 5, catalytic subunit [Bos taurus] Length = 432 Score = 39.3 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 48/156 (30%), Gaps = 31/156 (19%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102 + ++ E+ +A + K +++ A ++++Q P +S A+ Sbjct: 13 EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 69 Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y+ +A + ++YI YY S + + L Sbjct: 70 TECYGYALADATRAVEMDKKYIK----------GYYRRAASNMAL--------GKFRAAL 111 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + +V+ + A+ + K E Sbjct: 112 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 144 >gi|15833664|ref|NP_312437.1| oxidoreductase subunit [Escherichia coli O157:H7 str. Sakai] gi|217324905|ref|ZP_03440989.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. TW14588] gi|12518248|gb|AAG58671.1|AE005579_1 putative oxidoreductase subunit [Escherichia coli O157:H7 str. EDL933] gi|13363884|dbj|BAB37833.1| putative oxidoreductase subunit [Escherichia coli O157:H7 str. Sakai] gi|217321126|gb|EEC29550.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. TW14588] Length = 1002 Score = 39.3 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 288 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 344 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 345 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 401 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + + +V R S V + G+ A ++ + Sbjct: 402 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 455 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + L+R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 456 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 508 Score = 35.9 bits (82), Expect = 6.3, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 201 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 257 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 258 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 303 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 304 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 352 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 353 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 382 >gi|315648356|ref|ZP_07901456.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus vortex V453] gi|315276291|gb|EFU39635.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus vortex V453] Length = 1112 Score = 39.3 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 36/141 (25%), Gaps = 23/141 (16%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQY-SAGKYQQ 112 + +Y L ++ + +A + FP A Y + Q Sbjct: 767 AKALYYLGNLLYDKKRYEEAVSSWEASVALDDSFPTP------QRNLALAYYNKRQDHAQ 820 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A + + + P V Y Q+ + + + ++ +VE Sbjct: 821 ALASLQTAFSLNPADARVFYEL-------DQLYKKLGHAPADRLKAMEEHMELVEL---- 869 Query: 173 PYVKGARFYVTVGRNQLAAKE 193 N L E Sbjct: 870 --RDDLYLEYITLHNTLNRYE 888 >gi|254795483|ref|YP_003080320.1| cellulose synthase subunit BcsC [Escherichia coli O157:H7 str. TW14359] gi|254594883|gb|ACT74244.1| cellulose synthase subunit [Escherichia coli O157:H7 str. TW14359] Length = 1002 Score = 39.3 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 288 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 344 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 345 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 401 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + + +V R S V + G+ A ++ + Sbjct: 402 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 455 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + L+R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 456 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 508 Score = 35.9 bits (82), Expect = 6.3, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 201 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 257 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 258 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 303 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 304 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 352 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 353 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 382 >gi|296126807|ref|YP_003634059.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] gi|296018623|gb|ADG71860.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] Length = 452 Score = 39.3 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 7/70 (10%), Positives = 23/70 (32%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 V +++ A ++++ A ++ +P + + S + Sbjct: 238 PVESNPETIALFKSAEDLKNIKDYNNAVSTYSNVISQYPKSKYSVYSYFRIGDIYNQNKD 297 Query: 110 YQQAASLGEE 119 Y A + ++ Sbjct: 298 YNNAFDMYKQ 307 >gi|154339850|ref|XP_001565882.1| intraflagellar transport protein IFT88 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 810 Score = 39.3 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 65/226 (28%), Gaps = 48/226 (21%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-- 110 + +Y + K + +A F + ++L+ S V Y Sbjct: 507 EADNVEAIYNLGLAAKKLGLYEEAVRTFKR-----------MQALVDSNEVLYQIADLSD 555 Query: 111 ----QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 A I + P N +G YA+ DV Y Sbjct: 556 LVGDPSALEWFNRLIGRVPTDPN---ALARIGSLYARDGDDV--------QAFHYYLEAY 604 Query: 167 ERY--------------TNSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 Y + A + + Q ++ + + +RG+YV A Sbjct: 605 RYYQVNMDVISWLGAYFVKNEVYDRAVQFFERASHIQPQEVKWQLMVASCHRRRGDYVQA 664 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 ++ + Y D E + L++ L +EA E +++ Sbjct: 665 KRLYEQLHRKYPD---NVECLNYLMQLCKDAGLNEEANEWFKTMKK 707 Score = 35.5 bits (81), Expect = 7.9, Method: Composition-based stats. Identities = 29/208 (13%), Positives = 66/208 (31%), Gaps = 43/208 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFN---QCSR-----DFPFAGVARKSLLMSAFV-------QYS 106 E A+L L+ +++ A E + R + + + + QY Sbjct: 144 ESAMLALQ-KDYGAALEKAKDAGKLERSLCKKREQYG-FVEQINVDLTYAVHFNLAVQYQ 201 Query: 107 AGK-YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + Y +A + I V + + ++ Q+ L ++ ++ Sbjct: 202 NHQLYTEALNTYNLIIRN---------VQFPQAGRLRVNMGNIYLAQQNYLLAIKMYRKV 252 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 ++ G + RN I ++K G+Y A ++ V+ D Sbjct: 253 LDETP----TAGKELRYHLCRN--------IANAFVKLGQYRDAANSYETVVEGNGDVNA 300 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLI 253 L+ Y AL ++ + + + Sbjct: 301 T----YNLILCYYALGETEQMKRTFTRL 324 >gi|90414550|ref|ZP_01222524.1| hypothetical protein P3TCK_02211 [Photobacterium profundum 3TCK] gi|90324357|gb|EAS40923.1| hypothetical protein P3TCK_02211 [Photobacterium profundum 3TCK] Length = 668 Score = 39.3 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 25/68 (36%), Gaps = 8/68 (11%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 K + K ++ KA E + ++S A GK +++ ++ E + Sbjct: 370 KGIAEYKSGDYEKAIETLKPLAD--------QRSRYNLANAYAQTGKLEESEAIYESILK 421 Query: 123 QYPESKNV 130 P + + Sbjct: 422 DDPNNTDA 429 >gi|21326645|gb|AAL30085.1| NodB-like protein [Xanthomonas campestris pv. campestris] Length = 900 Score = 39.3 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 18/126 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E+ + KE+ ++ A E F + + P A + FV Y +Y +AA E + Sbjct: 791 ERGLQLYKEKRYADAAEQFAEALKLRP--DFA-LAANNLGFVYYRQERYAEAARWLENTL 847 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGAR 179 P ++Y + D+ + + + AR Sbjct: 848 KIDPS----------RAVAYLNLGDAYAKAGDREKARKAYTTYLALQ---PQGAGAEQAR 894 Query: 180 FYVTVG 185 + Sbjct: 895 AQLQTL 900 >gi|325180732|emb|CCA15139.1| cell division cycle protein 16 putative [Albugo laibachii Nc14] Length = 750 Score = 39.3 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 3/56 (5%) Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE---AMARLVEAYVALALMDEAR 247 EIG Y K+ Y +A+ Q L + + + L AY L EA Sbjct: 605 EIGVVYYKQKRYTSAVESLQEALQACPNTASKQTFSVTLFNLASAYRKLGRYQEAE 660 >gi|302853740|ref|XP_002958383.1| hypothetical protein VOLCADRAFT_121713 [Volvox carteri f. nagariensis] gi|300256263|gb|EFJ40533.1| hypothetical protein VOLCADRAFT_121713 [Volvox carteri f. nagariensis] Length = 1179 Score = 39.3 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 13/76 (17%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE---- 119 A L ++Q + +A Y+ RDFP +G + L A + G A + Sbjct: 178 AGLAYQQQQYKEAMSYYRAALRDFPGSGCPAEVRLGIAACAFKLGDLATARAAYRRGLAD 237 Query: 120 --------YITQYPES 127 + +P Sbjct: 238 CLRHLLTAF-QLHPGH 252 >gi|296126399|ref|YP_003633651.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] gi|296018215|gb|ADG71452.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] Length = 376 Score = 39.3 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 37/257 (14%), Positives = 81/257 (31%), Gaps = 42/257 (16%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-----NFSKAYEYFNQCSRD 86 + L + +S + DV +Y++A+ K+ N+ +A + + R Sbjct: 101 LISLSKEDFESYKTELYKHRGDVETDLNLYDEAIEDYKKALELNPNYIEAKKALEEADRK 160 Query: 87 FPFAGVARKSLLMSAFV----QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 + ++ Y+ +++ A + I N Y G+S Sbjct: 161 --LKEYNLNKSFDNYYIEGVNYYNKKQFEDALKTLNKAIEL---DPNKAKAYLYRGVSQL 215 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY--- 199 M R+ + ++ + +E N P Y +N L E + + Sbjct: 216 VMGRN--------EEAIKDFDKAIELDPNYP---KFYLYRGHSKNLLKKYEEAVKDFDKA 264 Query: 200 ----------YLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDE 245 Y+ RG + +++ + ++ + +A + + L DE Sbjct: 265 IELDSNYAKAYMYRGVSKLGLNKYEEAIKDFDKTIELNPNYIDAYYHRGLSKLGLNQNDE 324 Query: 246 AREVVSLIQERYPQGYW 262 E I E P + Sbjct: 325 GIEDFDKIAELNPDNSF 341 Score = 38.6 bits (89), Expect = 0.97, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 53/145 (36%), Gaps = 20/145 (13%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFA 90 ++G ++ +D D Y + + + + +A + F++ ++ Sbjct: 215 LVMGRNEEAIKDFDKAIELDPNYPKFYLYRGHSKNLLKKYEEAVKDFDKAIELDSNY--- 271 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 K+ + + KY++A ++ I P +D YY G+S + ++ Sbjct: 272 ---AKAYMYRGVSKLGLNKYEEAIKDFDKTIELNPN--YID-AYYHRGLSKLGLNQN--- 322 Query: 151 DQRATKLMLQYMSRIVERYTNSPYV 175 ++ +I E ++ +V Sbjct: 323 -----DEGIEDFDKIAELNPDNSFV 342 >gi|257459072|ref|ZP_05624191.1| TPR repeat-containing protein [Campylobacter gracilis RM3268] gi|257443457|gb|EEV18581.1| TPR repeat-containing protein [Campylobacter gracilis RM3268] Length = 276 Score = 39.3 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 52/139 (37%), Gaps = 17/139 (12%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 DS + Q V ++A ++++S A E +N K+ M + Y Sbjct: 152 TKSDSDFKSKDQASVLKEADTLYAKKDYSGAKERYNYLVSK---NYKPAKANYMLGEISY 208 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 +G Y +A + ++ I+ +++ DY + Y +S+ ++ ++ Sbjct: 209 FSGSYAEAINYYKKSIS---HNESQDYTPKLLYHTAISFDKIGDKDS--------ANKFY 257 Query: 163 SRIVERYTNSPYVKGARFY 181 + Y +S K A Sbjct: 258 KALKASYPDSKEAKAAPAR 276 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 25/65 (38%) Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 G Y AI ++ +++ ++ + + ++ + D A + ++ YP A Sbjct: 211 GSYAEAINYYKKSISHNESQDYTPKLLYHTAISFDKIGDKDSANKFYKALKASYPDSKEA 270 Query: 264 RYVET 268 + Sbjct: 271 KAAPA 275 >gi|302878804|ref|YP_003847368.1| hypothetical protein Galf_1586 [Gallionella capsiferriformans ES-2] gi|302581593|gb|ADL55604.1| hypothetical protein Galf_1586 [Gallionella capsiferriformans ES-2] Length = 460 Score = 39.3 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 22/184 (11%), Positives = 49/184 (26%), Gaps = 47/184 (25%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQ--NFSKAYEYFNQCSRDFPFAGVARKSLLM 99 +S + D R+ +E E ++ A + + + V +SL Sbjct: 280 ASFKTVIADFPDADEARQAHESLANTYDENLRDYVNAIAAYEAIASRYKNDAVVLRSLQS 339 Query: 100 SAFVQY-SAGKYQQAASLGEE----Y---------------------------------I 121 A + + QA + + + Sbjct: 340 LARLYQDKTHQPAQALATYRRVYDIFKGREGLAALVKAQKIAVSHLSDWNQAIEINDLIM 399 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 YP+S Y G+ Y + +++ + + ++ RY K A+ Sbjct: 400 RAYPDSDEAVTALYGNGVIYEENKKEIEH-------ATRLYQDLINRYPQHELSKDAKRR 452 Query: 182 VTVG 185 + Sbjct: 453 INTL 456 >gi|237751976|ref|ZP_04582456.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] gi|229376543|gb|EEO26634.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] Length = 298 Score = 39.3 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 30/71 (42%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 ++ Y AI ++ Y A++ M +++ AL D A+ + + YP Sbjct: 228 FEQKRYEDAIYYYKTSATRYDKADYMPRLMLHSAKSFEALKEKDNAKRFLETLIALYPTS 287 Query: 261 YWARYVETLVK 271 A+ + L+K Sbjct: 288 SEAKEAKKLIK 298 >gi|197123198|ref|YP_002135149.1| hypothetical protein AnaeK_2795 [Anaeromyxobacter sp. K] gi|196173047|gb|ACG74020.1| conserved hypothetical protein [Anaeromyxobacter sp. K] Length = 285 Score = 39.3 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 9/118 (7%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 ++ +A + +P A +LL SA +AG+ + A +L +Y Sbjct: 156 RAARRKGGLDRA-HALEDFTARYPRHPAADNALLESAEAYAAAGRGEAACALVRRTADEY 214 Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 P + + A++ + R+V Y +P + A + Sbjct: 215 PAGDAMSAALERLAACAARL--------GHADEERTLLQRLVSDYPGTPAAQRAGGRL 264 Score = 35.5 bits (81), Expect = 7.6, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 35/122 (28%), Gaps = 26/122 (21%) Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 E++ +YP D +YA R + + R + Y + Sbjct: 169 ALEDFTARYPRHPAADNALLESAEAYAAAGRG--------EAACALVRRTADEYPAGDAM 220 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR--FQLVLANYSDAEHAEEAMARL 233 A + +L A R Q ++++Y A+ A RL Sbjct: 221 SAALERLAACAARLGH----------------ADEERTLLQRLVSDYPGTPAAQRAGGRL 264 Query: 234 VE 235 + Sbjct: 265 GQ 266 >gi|85704959|ref|ZP_01036059.1| TPR domain protein [Roseovarius sp. 217] gi|85670281|gb|EAQ25142.1| TPR domain protein [Roseovarius sp. 217] Length = 186 Score = 39.3 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 38/122 (31%), Gaps = 16/122 (13%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + + L+ + A E+ + P A L S + +Y A E+ Sbjct: 69 LLRRGQDALEAGDLGAAIEHLSAAIDHAP--DFAEAWHLRSV-AFFKQERYGLALYDIEQ 125 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ-RATKLMLQYMSRIVERYTNSPYVKGA 178 + P NV Y G+ V D+ L SR + + + V A Sbjct: 126 ALALEPRHFNVIY-----GL-------GVLLDELGQPDLAEDAFSRALAIHPHHEDVTKA 173 Query: 179 RF 180 R Sbjct: 174 RE 175 >gi|320191422|gb|EFW66072.1| Cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC1212] Length = 1157 Score = 39.3 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + + +V R S V + G+ A ++ + Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + L+R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|224024273|ref|ZP_03642639.1| hypothetical protein BACCOPRO_00996 [Bacteroides coprophilus DSM 18228] gi|224017495|gb|EEF75507.1| hypothetical protein BACCOPRO_00996 [Bacteroides coprophilus DSM 18228] Length = 1053 Score = 39.3 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 72/222 (32%), Gaps = 46/222 (20%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSA 101 R + L + +Y + +L ++ + KA Y + +D F+ +L+ + Sbjct: 450 KRPMTLPEDFNWNSAFGLYTQGEQWLNQKVWDKAESYLKKSLKQDANFSP----ALVRLS 505 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + Y G+YQ+ L E + +Y+Y G++ Sbjct: 506 SLYYREGRYQEMIPLLERALGLNTYDGEANYLY---GLAN--------RMLGNATEAKAA 554 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + + ++ S + AA E ++G Y + A Y+ Sbjct: 555 FA--IATFSASV--------------RTAAYE-QLGEMYACDRNWTKA--------EQYA 589 Query: 222 DAEHAEEAMA-----RLVEAYVALALMDEAREVVSLIQERYP 258 AM L Y + A+E +S + ++ P Sbjct: 590 KKSLTYNAMNLHARQLLTMIYRKTGRTELAKEQISQVLDQLP 631 >gi|222053755|ref|YP_002536117.1| glycosyl transferase family 2 [Geobacter sp. FRC-32] gi|221563044|gb|ACM19016.1| glycosyl transferase family 2 [Geobacter sp. FRC-32] Length = 3011 Score = 39.3 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 38/118 (32%), Gaps = 13/118 (11%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 V VY AV E N ++A R P +A + + G+ ++A Sbjct: 1098 VEAPEAVYSAAVSLANEGNVAEAQNRLEHLLRHHPKFVLAHN---DLGVLYSNLGETEKA 1154 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + E+ P + + ++ + T+ LQ +++ + Sbjct: 1155 LAHFEQATQLEPTN-----ATFQKNLADFYQVV-----LGRTEDALQIYVKLLAMHPK 1202 >gi|67614426|ref|XP_667371.1| hypothetical protein [Cryptosporidium hominis TU502] gi|54658506|gb|EAL37145.1| hypothetical protein Chro.80252 [Cryptosporidium hominis] Length = 514 Score = 39.3 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 49/152 (32%), Gaps = 30/152 (19%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQ----CSR------------DFPFAGVARKSLLM 99 +E+ + K N+S A E + + + + + + + L Sbjct: 30 SAKELKDAGNESYKGGNYSDAREKYEKGLELLEKIDQKDDEKEGFGEDEMSELRQSLQLN 89 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 A + ++ +A + + + + SKNV Y G++ + Sbjct: 90 LAMIYVKIQEWSKAIQVTGQVLKKN--SKNVK-ALYRRGLARLGF--------GMYEESK 138 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 + +++ ++ A + V R ++ Sbjct: 139 EDFQNVLKLDPSN---ADAHRQLKVLRQKIQE 167 >gi|320645346|gb|EFX14362.1| cellulose synthase subunit BcsC [Escherichia coli O157:H- str. 493-89] gi|320650657|gb|EFX19123.1| cellulose synthase subunit BcsC [Escherichia coli O157:H- str. H 2687] Length = 1157 Score = 39.3 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + + +V R S V + G+ A ++ + Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + L+R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|303247343|ref|ZP_07333616.1| Peptidoglycan-binding lysin domain protein [Desulfovibrio fructosovorans JJ] gi|302491257|gb|EFL51146.1| Peptidoglycan-binding lysin domain protein [Desulfovibrio fructosovorans JJ] Length = 453 Score = 39.3 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 40/121 (33%), Gaps = 18/121 (14%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110 +EK + F K+ F +A + FN+ + P A + Y +Y Sbjct: 302 QTSDAEAAFEKGIEFGKQNKFQQAVDSFNKAIKLNPNRADFYASR-----GHAHYYMKQY 356 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +A + I + P N Y + G+S + + + ++ + Sbjct: 357 AKAIDDYTKAIEKNP---NFALAYSMRGLSRTRS--------GQYQQAITDFNKAIGFGP 405 Query: 171 N 171 N Sbjct: 406 N 406 >gi|296224840|ref|XP_002758232.1| PREDICTED: prolyl 3-hydroxylase 2 [Callithrix jacchus] Length = 708 Score = 39.3 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P+ ++V L + Y + + D D A+ + Sbjct: 314 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSIDP-ASIEARED 367 Query: 162 MSRIVERY 169 ++ V+R+ Sbjct: 368 LTMFVKRH 375 >gi|30248172|ref|NP_840242.1| TPR repeat-containing protein [Nitrosomonas europaea ATCC 19718] gi|30180057|emb|CAD84057.1| TPR repeat [Nitrosomonas europaea ATCC 19718] Length = 263 Score = 39.3 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 45/127 (35%), Gaps = 14/127 (11%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 +R + LK+ +F +A YF + P +AR L+ +S G+ ++A Sbjct: 144 ETPERTYTNAGLCVLKQNDFERAQSYFQEALVIRPGYPLARLGLVEL---DFSRGEVKKA 200 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + Y+ YP + + + Y ++ +R+ +S Sbjct: 201 WAAINRYLQTYPPAPG-----------SLWLAVRIARANGDVNAETNYAFQLQKRFPDSR 249 Query: 174 YVKGARF 180 + +R Sbjct: 250 EARESRA 256 >gi|320666656|gb|EFX33639.1| cellulose synthase subunit BcsC [Escherichia coli O157:H7 str. LSU-61] Length = 1157 Score = 39.3 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + + +V R S V + G+ A ++ + Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + L+R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWALQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 6.0, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|281180568|dbj|BAI56898.1| putative cellulose synthase [Escherichia coli SE15] Length = 1157 Score = 39.3 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198 Q + +V R N ++ A G+ A ++ + Sbjct: 557 RAQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEALLRQQPPSSRIDLTLAD 611 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663 >gi|260912480|ref|ZP_05919016.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] gi|260633399|gb|EEX51553.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] Length = 857 Score = 39.3 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 9/67 (13%), Positives = 19/67 (28%), Gaps = 4/67 (5%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A K N+ +A + + P + + + + QA E Sbjct: 635 ADQEYKRGNYPQAIADYKSLLKKTP----SAEVYYNLGNAYFRSDSIPQAILAYERAALI 690 Query: 124 YPESKNV 130 P + + Sbjct: 691 NPGNSYI 697 >gi|255530043|ref|YP_003090415.1| TPR repeat-containing protein [Pedobacter heparinus DSM 2366] gi|255343027|gb|ACU02353.1| TPR repeat-containing protein [Pedobacter heparinus DSM 2366] Length = 289 Score = 39.3 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 + +G + +K G++ A+ RF ++A + +A L AY L +EA + Sbjct: 210 MSLGTFAMKSGQFDKAVNRFNDIIAIKP----SPDAYFYLGTAYENLGKNEEAIDA 261 >gi|220917987|ref|YP_002493291.1| hypothetical protein A2cp1_2888 [Anaeromyxobacter dehalogenans 2CP-1] gi|219955841|gb|ACL66225.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 285 Score = 39.3 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 9/118 (7%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 ++ +A + +P A +LL SA +AG+ + A +L +Y Sbjct: 156 RAARRKGGLDRA-HALEDFTARYPRHPAADNALLESAEAYAAAGRGEAACALVRRTADEY 214 Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 P + + A++ + R+V Y +P + A + Sbjct: 215 PAGDAMSAALERLAACAARL--------GHADEERTLLQRLVSDYPGTPAAQRAGGRL 264 Score = 35.5 bits (81), Expect = 7.8, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 35/122 (28%), Gaps = 26/122 (21%) Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 E++ +YP D +YA R + + R + Y + Sbjct: 169 ALEDFTARYPRHPAADNALLESAEAYAAAGRG--------EAACALVRRTADEYPAGDAM 220 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR--FQLVLANYSDAEHAEEAMARL 233 A + +L A R Q ++++Y A+ A RL Sbjct: 221 SAALERLAACAARLGH----------------ADEERTLLQRLVSDYPGTPAAQRAGGRL 264 Query: 234 VE 235 + Sbjct: 265 GQ 266 >gi|126433545|ref|YP_001069236.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium sp. JLS] gi|126233345|gb|ABN96745.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium sp. JLS] Length = 464 Score = 39.3 bits (91), Expect = 0.60, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 3/48 (6%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARK 95 ++ E Y + + + +S+A E F S D+P A ++ Sbjct: 300 TPELSPADEAYREGLDNFEAGKYSEAIENFGTALAISGDYPGAREKQR 347 >gi|302337459|ref|YP_003802665.1| hypothetical protein Spirs_0937 [Spirochaeta smaragdinae DSM 11293] gi|301634644|gb|ADK80071.1| hypothetical protein Spirs_0937 [Spirochaeta smaragdinae DSM 11293] Length = 147 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 9/115 (7%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 Y A + ++ L + + V +++++A F +A EY Sbjct: 9 YLTAAIVVSILSFSILASCASE------PEPVLSDLTPAQIFQQAQEAASNDKFQRAIEY 62 Query: 80 FNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 ++ +P +R+ + AF+ + G Q+A L + + +Y + Y Sbjct: 63 YHYFLDSYP-NETSRRVEAEYEIAFLIHKMGNDQEALRLFDALLEKYRSEEAAVY 116 >gi|260221170|emb|CBA29467.1| hypothetical protein Csp_A12290 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 152 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 28/81 (34%), Gaps = 17/81 (20%) Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 + + L+ GK +A + ++++ P + +L G+ + Sbjct: 30 DYSDVAQLV------RNGKLPEAMTKVDQFLVAKPRDPQM---RFLKGV--------IQR 72 Query: 151 DQRATKLMLQYMSRIVERYTN 171 D T + +R+ E Y Sbjct: 73 DSGKTSEAIATFTRLTEDYPE 93 >gi|225684617|gb|EEH22901.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03] Length = 982 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 22/143 (15%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108 D + Y ++ + + KAYE + Q P + Y Sbjct: 334 ADNGDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 387 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y+ A I P + V+Y +G + + + D L R E Sbjct: 388 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQTND------ALDAYRRAAEL 437 Query: 169 YTNSPYVKGARFYVTVGRNQLAA 191 + ++ + + + ++ A Sbjct: 438 DPTNVHI---KARLQLLQSGQAG 457 >gi|254457199|ref|ZP_05070627.1| tetratricopeptide repeat domain protein [Campylobacterales bacterium GD 1] gi|207085991|gb|EDZ63275.1| tetratricopeptide repeat domain protein [Campylobacterales bacterium GD 1] Length = 618 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 7/70 (10%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEY 120 +A +F+K N+ A E FN+ + PF+ +LL A ++ Y A Y Sbjct: 501 RAEMFIKSGNYPIAIEEFNKALKLAPFS-----ALLYFNIAILEGKIANYPLAIDSMNMY 555 Query: 121 ITQYPESKNV 130 I P++ NV Sbjct: 556 IKMAPQAPNV 565 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 46/143 (32%), Gaps = 32/143 (22%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF------LKEQNFS-- 74 LT+ I +R S + + Y +E Y++A L N++ Sbjct: 6 ILTLILVILFTGCASTQRSVSPQQQAFNNGTLLYSQEKYKEAAAEFKTALQLNANNYNAK 65 Query: 75 --------------KAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + FN+ + P + A+ +Y ++ S + Sbjct: 66 AWLAFSYCRSGQNGEGIDIFNKLIYNNPTHYNNFN-----GLAYCYNENQQYDESISASK 120 Query: 119 EYITQYPESKNVDYVYYLVGMSY 141 + P N Y+ +G+SY Sbjct: 121 RALELKPNYSN---AYFNMGVSY 140 >gi|220910351|ref|YP_002485662.1| TPR repeat-containing protein [Cyanothece sp. PCC 7425] gi|219866962|gb|ACL47301.1| TPR repeat-containing protein [Cyanothece sp. PCC 7425] Length = 699 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 22/132 (16%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + + + + A F++ P A K+ + G + A ++ + Sbjct: 578 NRGLALQELERYEDAIASFDKVIELNP---KAHKAWNNRGYALVKLGYDEDALESFDQAL 634 Query: 122 TQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 T P DY YY + YA Q K L+ + VE Y + A Sbjct: 635 TLDP-----DYGAAYYNKAICYAL--------QGQVKPALENLQAAVELNPT--YRQEAA 679 Query: 180 FYVTVGRNQLAA 191 ++LA Sbjct: 680 VEPDF--DELAR 689 >gi|167043992|gb|ABZ08678.1| putative TPR domain protein [uncultured marine crenarchaeote HF4000_APKG3K8] Length = 405 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 48/141 (34%), Gaps = 19/141 (13%) Query: 35 LVGWERQSSRDVYLDS-----VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 L G +++S++ + V + +++ K + + ++ A F R P Sbjct: 35 LFGLKKKSAKTELVKKDETSLVDADFNRNKLFSKGINLMADEKLEDASHVFQMILRINPN 94 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 +LL + ++ Y ++ ++ + + N D + L + Y + Sbjct: 95 D---VDALLKLGYSRFHLEDYTESMRAYDKILDI--DVANAD-AWNLKSLVYYER----- 143 Query: 150 YDQRATKLMLQYMSRIVERYT 170 + L + ++ Sbjct: 144 ---KVYGKALDSADKAIDSDP 161 >gi|110331873|gb|ABG67042.1| protein phosphatase 5, catalytic subunit [Bos taurus] Length = 430 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 48/156 (30%), Gaps = 31/156 (19%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF-- 102 + ++ E+ +A + K +++ A ++++Q P +S A+ Sbjct: 11 EPPADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS---LAYLR 67 Query: 103 --VQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y+ +A + ++YI YY S + + L Sbjct: 68 TECYGYALADATRAVEMDKKYIK----------GYYRRAASNMAL--------GKFRAAL 109 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + +V+ + A+ + K E Sbjct: 110 RDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 142 >gi|24217139|ref|NP_714622.1| TPR repeat-containing protein [Leptospira interrogans serovar Lai str. 56601] gi|24202175|gb|AAN51637.1| thioredoxin domain-containing protein [Leptospira interrogans serovar Lai str. 56601] Length = 357 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 17/153 (11%), Positives = 49/153 (32%), Gaps = 25/153 (16%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---------CSRDFPFAGVA 93 + + D + + ++ V + + + +SKA ++F + + Sbjct: 221 ENEYLENLAKDPQGIQTNFQAGVYYFEAKEYSKAIQFFQKAIDSNDSKNLEKKH------ 274 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 +L G ++ A S Y+++YP V V + +Y ++ Sbjct: 275 -DALFNLGISYLEIGNFKLAISTFNSYLSKYPNGDLVS-VLFFRANAYEEL--------N 324 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + +++E + + + + Sbjct: 325 LKEEAKADYKKVLELTLDPDEKQDLQMRIDSLN 357 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 14/99 (14%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 +Q+ + + +S K N G YL+ G + AI F Sbjct: 253 KAIQFFQKAI----DSNDSKNLEKKHDALFNL--------GISYLEIGNFKLAISTFNSY 300 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQ 254 L+ Y + + + AY L L +EA+ + +++ Sbjct: 301 LSKYPNGDLVS-VLFFRANAYEELNLKEEAKADYKKVLE 338 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 2/70 (2%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLA--NYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 + G YY + EY AI FQ + + + E +A+ L +Y+ + A + Sbjct: 239 FQAGVYYFEAKEYSKAIQFFQKAIDSNDSKNLEKKHDALFNLGISYLEIGNFKLAISTFN 298 Query: 252 LIQERYPQGY 261 +YP G Sbjct: 299 SYLSKYPNGD 308 >gi|50513343|pdb|1QZ2|A Chain A, Crystal Structure Of Fkbp52 C-Terminal Domain Complex With The C-Terminal Peptide Meevd Of Hsp90 gi|50513344|pdb|1QZ2|B Chain B, Crystal Structure Of Fkbp52 C-Terminal Domain Complex With The C-Terminal Peptide Meevd Of Hsp90 gi|50513345|pdb|1QZ2|C Chain C, Crystal Structure Of Fkbp52 C-Terminal Domain Complex With The C-Terminal Peptide Meevd Of Hsp90 Length = 336 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 46/146 (31%), Gaps = 30/146 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109 E+ ++ KE + +A + + + A+K+ L A Sbjct: 152 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQA 211 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + +L ++++ Y Sbjct: 212 FSAAIESCNKALELDSNNEKG---LFRRGEAHLAVND--------FELARADFQKVLQLY 260 Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191 N+ A+ + V R QLA Sbjct: 261 PNNK---AAKTQLAVCQQRIRRQLAR 283 >gi|324007316|gb|EGB76535.1| tetratricopeptide repeat protein [Escherichia coli MS 57-2] Length = 1157 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198 Q + +V R N ++ A G+ A ++ + Sbjct: 557 RAQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 611 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663 >gi|302037282|ref|YP_003797604.1| hypothetical protein NIDE1955 [Candidatus Nitrospira defluvii] gi|300605346|emb|CBK41679.1| conserved protein of unknown function, TPR-like [Candidatus Nitrospira defluvii] Length = 859 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 40/94 (42%), Gaps = 7/94 (7%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 +T+ VC +V + ++ + ++VT ++ E+ ++ FS+A +Y+ + Sbjct: 32 TMTLLAIFFVCIVVAGQAWTTDALAQETVT----PEKLMEQGQSAYQQGAFSQAMQYWTE 87 Query: 83 CSRDFP---FAGVARKSLLMSAFVQYSAGKYQQA 113 R + K+ + Y G +++A Sbjct: 88 AGRRYERDGKTREQIKAQVNLTQALYQTGHFKEA 121 >gi|254427897|ref|ZP_05041604.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881] gi|196194066|gb|EDX89025.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881] Length = 233 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 38/118 (32%), Gaps = 17/118 (14%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREV-------YEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 G +S V++ V ++ Y +A+ N +A F + +P Sbjct: 33 SGGAAANSDAVHIPPVPHDPKVEKIAQQAMGEYARALQTRMAGNNEQALVMFQSLAERYP 92 Query: 89 F--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 L +Q Y +A + E+ + + Y + +G++ + Sbjct: 93 QLSGP-----QLNIGLIQMELEDYDKAQAAFEQSLAINDANP---YAHNGLGLALREQ 142 >gi|195014701|ref|XP_001984064.1| GH15212 [Drosophila grimshawi] gi|193897546|gb|EDV96412.1| GH15212 [Drosophila grimshawi] Length = 1192 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 52/138 (37%), Gaps = 24/138 (17%) Query: 136 LVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------RFYV 182 L+ + + RD +++ + L +++ + + + V Sbjct: 603 LIALGNFSLQTLHQPSRDKEKERKHQEKALAIYKQVLRTDPRNIWATNGIGAVLAHKGCV 662 Query: 183 TVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 R+ A +E + I Y+++ +Y++AI ++ + + + E M Sbjct: 663 IEARDIFAQVREATADFCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNV-EVMQY 721 Query: 233 LVEAYVALALMDEAREVV 250 L AY+ + EA+ V+ Sbjct: 722 LARAYLRANKLVEAKSVL 739 >gi|124378022|ref|NP_663411.2| cell division cycle protein 27 homolog [Mus musculus] gi|281312187|sp|A2A6Q5|CDC27_MOUSE RecName: Full=Cell division cycle protein 27 homolog gi|123243011|emb|CAM22621.1| cell division cycle 27 homolog (S. cerevisiae) [Mus musculus] gi|148702274|gb|EDL34221.1| mCG11216 [Mus musculus] gi|182887965|gb|AAI60241.1| Cell division cycle 27 homolog (S. cerevisiae) [synthetic construct] Length = 825 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 636 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 637 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 692 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 693 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 747 Query: 237 YVALALMDEA 246 Y L A Sbjct: 748 YKKLGQTHLA 757 >gi|73667829|ref|YP_303844.1| TPR domain-containing protein [Methanosarcina barkeri str. Fusaro] gi|72394991|gb|AAZ69264.1| TPR-domain containing protein [Methanosarcina barkeri str. Fusaro] Length = 1013 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 75/217 (34%), Gaps = 39/217 (17%) Query: 56 YQREVYEKAVLFLK-------EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 Y R Y KA+ FL E+NF KA E F+ P VA + Y Sbjct: 5 YARAWYSKALAFLNLKNQIGAEKNFEKALEAFDAVLAVNPEDSVAWQYRGNILR--YLDR 62 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 ++A E+ + P+ N+ YL G+++ + T+ L+ + ++ R Sbjct: 63 -PEEALQAFEKALDLDPD--NIP-ARYLKGLTFGYL--------NLTEQALEAFNGVLGR 110 Query: 169 YTNSP----YVKGARFYVT------VGRNQLAAK--EVEIGRYYLKRGEYVAAIPRFQLV 216 Y A +T + A E YY RG ++A R + Sbjct: 111 DEKHIGALYYSGLALKQLTRDEEALEAFTRAAEFNPENSKAWYY--RGVILSAFGRNEEA 168 Query: 217 LANYSDA----EHAEEAMARLVEAYVALALMDEAREV 249 L Y A +AY+AL+ EA Sbjct: 169 LEAYGKTLKLEPLHSGAWEGEAKAYLALSRRREALRT 205 >gi|21228822|ref|NP_634744.1| hypothetical protein MM_2720 [Methanosarcina mazei Go1] gi|20907343|gb|AAM32416.1| hypothetical protein MM_2720 [Methanosarcina mazei Go1] Length = 1129 Score = 39.3 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 37/112 (33%), Gaps = 14/112 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + +F A +++ P A F KYQ+A + ++ Sbjct: 849 MYRQGKALEAMGDFEAAIACYDKILALDPKNIDAIN---NKGFALSKMEKYQEALATYDK 905 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + P++ +Y G + + + L+ ++ V+ + Sbjct: 906 ALEYDPDNPA---AWYFKGCANFAISSN--------NAALECFNKTVQLKPD 946 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 52/143 (36%), Gaps = 23/143 (16%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGK 109 D Y + Y+K K + A + +++ ++ A + AF G+ Sbjct: 465 DSGYAKVWYKKGYDSSKLGKYKDAVKSYDEAIDLDENYTLAWYGK------AFALAKIGR 518 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+ + + + P+S + +Y G+ ++ ++ Q A+ Q + Sbjct: 519 YEDSIVCYDRVLEVAPDSAEI---WYNKGL----LLDELGRYQEASDCYSQALQI----- 566 Query: 170 TNSPYVKGARFYVTVGRNQLAAK 192 NS Y ARF + L+ Sbjct: 567 -NSNYSV-ARFRLNKDIEMLSGN 587 >gi|302671508|ref|YP_003831468.1| TPR domain-containing protein [Butyrivibrio proteoclasticus B316] gi|302395981|gb|ADL34886.1| TPR domain-containing protein [Butyrivibrio proteoclasticus B316] Length = 472 Score = 39.3 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 32/85 (37%), Gaps = 3/85 (3%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S+ Y A K +++ A +++ + F +L Y +G Sbjct: 380 SLVGSELATSYYNAANDAYKAEDYETAIANYSKA---YQFDNTNVNTLYYLGNSYYESGD 436 Query: 110 YQQAASLGEEYITQYPESKNVDYVY 134 ++ A + + IT +P++++ Sbjct: 437 FENAKTTYDAVITNFPDTQSAAAAQ 461 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 6/77 (7%) Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA----MARLVEAYVALALMD 244 L E+ Y Y A ++ +ANYS A + + L +Y + Sbjct: 381 LVGSELATSYYNAANDAYKA--EDYETAIANYSKAYQFDNTNVNTLYYLGNSYYESGDFE 438 Query: 245 EAREVVSLIQERYPQGY 261 A+ + +P Sbjct: 439 NAKTTYDAVITNFPDTQ 455 >gi|303279024|ref|XP_003058805.1| predicted protein [Micromonas pusilla CCMP1545] gi|226459965|gb|EEH57260.1| predicted protein [Micromonas pusilla CCMP1545] Length = 669 Score = 39.3 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 66/252 (26%), Gaps = 56/252 (22%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARK 95 G + + L TD R + K L+ + A + F + Sbjct: 389 GDYENAQKYADLSVATDRYDARALVNKGNCHLQRGDLEGARDLFLEAVGVQ----ADCHE 444 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR--------- 146 ++ G Y+ A + + + + + V Y +G + Sbjct: 445 AIYNLGLAYIKLGAYEDALAA---FRKVHAMTPDNAEVLYQLGNVSDMLGDFPAAIKHLE 501 Query: 147 ----DVPYDQ-------------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 V D L Y Y + + V R Sbjct: 502 ILHAKVSTDPGILARLGAIHAAIGDEAKALHYYQESHRLYPSD---------MDVLR--- 549 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQ-LVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +G +Y+K G + A +Q + D ++ + + +++A Sbjct: 550 -----WLGTFYVKTGNWEKARELYQLACMIKPKDVKYR----LLVATCLRKVGNVNDALA 600 Query: 249 VVSLIQERYPQG 260 I + YP Sbjct: 601 AYETIHKVYPDN 612 >gi|298530906|ref|ZP_07018307.1| glycosyl transferase family 2 [Desulfonatronospira thiodismutans ASO3-1] gi|298508929|gb|EFI32834.1| glycosyl transferase family 2 [Desulfonatronospira thiodismutans ASO3-1] Length = 1943 Score = 39.3 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 17/121 (14%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVARKSLLMSAFVQYSA 107 V+ E A+ ++++N+++A + + P A SL Sbjct: 925 EPVQPDDETVAHALEAIQQENWAEAIRRWQKVFLKHKNQAPAHAYASLSL-----AHRMQ 979 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G +A L E+ YP+ K + + D+ Q + ++ Sbjct: 980 GNPDKAEKLIEQGQKNYPDDKEL--------LLEYVKTAKARRDRAEAAKRSQRLEQVSN 1031 Query: 168 R 168 R Sbjct: 1032 R 1032 >gi|145537956|ref|XP_001454689.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124422455|emb|CAK87292.1| unnamed protein product [Paramecium tetraurelia] Length = 432 Score = 39.3 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 12/106 (11%), Positives = 30/106 (28%), Gaps = 18/106 (16%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 Y +Y K + F A E ++ ++ + ++ +YQ+ Sbjct: 309 YIEAIYNKGIALFNLNRFQDAIECYDHVIAIDSNY------NDAYYNKGIALFNLNRYQE 362 Query: 113 AASLGEEYITQYPESKNVDY----VYYLV-----GMSYAQMIRDVP 149 A ++ P + Y Y++ + + Sbjct: 363 ALDCYDQATRINPNQSDAFYNKGNALYILKRYEEALECYNQSNKID 408 >gi|118594932|ref|ZP_01552279.1| SPY protein [Methylophilales bacterium HTCC2181] gi|118440710|gb|EAV47337.1| SPY protein [Methylophilales bacterium HTCC2181] Length = 621 Score = 39.3 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 42/155 (27%), Gaps = 39/155 (25%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV-------QYSAGKYQQAASLGEEYITQ 123 F A YF + FP + F + Y A + EE I Sbjct: 51 NKFDIAAGYFRRAIYQFPDND---QIRYGLGFCLQRIGNEYHKNRNYLMAQAAFEEAIEI 107 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 P++ + +G ++ Q K L ++ ++ Sbjct: 108 CPDNAEH---LFNLGNAFYA--------QGLFKKALNSFEESLQILPDNE---------- 146 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 A I Y K +YV A ++ L Sbjct: 147 ------AHH--NIANSYKKLNDYVKAKKHYEKALE 173 >gi|326914341|ref|XP_003203484.1| PREDICTED: intraflagellar transport protein 88 homolog [Meleagris gallopavo] Length = 818 Score = 39.3 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 35/283 (12%), Positives = 79/283 (27%), Gaps = 56/283 (19%) Query: 6 GRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAV 65 + +FE ++ A T + +L Q++ L +D + K Sbjct: 436 LETLKMFEKKDSRVKSAAATNLSFLY--YLENELAQATNYADLAVSSDRYNPAALTNKGN 493 Query: 66 LFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 +++ KA E++ D +L + +A ++ + Sbjct: 494 TVFANEDYEKAAEFYKEALRNDCSCTE----ALYNLGLTYKKLNRTDEALDC---FLKLH 546 Query: 125 PESKNVDYVYYLVGMSY-------------AQMIRDVPYDQ-------------RATKLM 158 N V + + Y Q+I VP D Sbjct: 547 AILGNSAQVLHQIADIYEIMEDPNQAIEWLMQLISVVPTDPHVLSKLGKLYDNEGDKSQA 606 Query: 159 LQYMSRIVERYT--------------NSPYVKGARFYVTVGRNQL---AAKEVEIGRYYL 201 Y + ++ + + A Y L ++ + Y Sbjct: 607 FHYYYESYRYFPSNIEVIEWLGAYCIDTQFCEKAIEYFERAALILPTQVKWQLMVASCYR 666 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 + G Y A+ +++++ + + E + LV + L + Sbjct: 667 RSGNYQKALEKYKVIHQKFPE---NVECLRFLVRLCTDMGLKE 706 >gi|196000837|ref|XP_002110286.1| hypothetical protein TRIADDRAFT_54126 [Trichoplax adhaerens] gi|190586237|gb|EDV26290.1| hypothetical protein TRIADDRAFT_54126 [Trichoplax adhaerens] Length = 1597 Score = 39.3 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 46/126 (36%), Gaps = 20/126 (15%) Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 V + G+ + + K ++ Y N + + AR + Sbjct: 1401 VLHYSGLCLYKQKQYNE-----AKSFFDNSLKLKRDYYNEDHFEIARTH----------H 1445 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLA---NYSDAEHAEEAMARLVEAYVALALMDEAREV 249 E IGR Y + +Y +I F L Y ++ + L ++Y +++ + Sbjct: 1446 E--IGRCYYIQKQYENSIKEFDEALRIRRKYYNSTQTLSTLIYLAKSYKNTGEVEKRKLA 1503 Query: 250 VSLIQE 255 ++L++E Sbjct: 1504 ITLLEE 1509 >gi|86160760|ref|YP_467545.1| hypothetical protein Adeh_4345 [Anaeromyxobacter dehalogenans 2CP-C] gi|85777271|gb|ABC84108.1| hypothetical protein Adeh_4345 [Anaeromyxobacter dehalogenans 2CP-C] Length = 291 Score = 39.3 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 45/145 (31%), Gaps = 25/145 (17%) Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ-RATKLMLQY 161 G YQ A + I+ +P G + D+ D+ + Sbjct: 78 SYLELGDYQSALAYYRRIISLHPGGPEAHEA---RG-----RLGDIFRDRYGDHLAAITQ 129 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + + +SP ++E+ R YL + A +++ + Sbjct: 130 YADVAGS--DSPDAP--------------RYQLEVAREYLALKRWEQARTEARILREKWP 173 Query: 222 DAEHAEEAMARLVEAYVALALMDEA 246 E A+EA +++ +EA Sbjct: 174 THELADEAQLLTAQSWALERRDEEA 198 >gi|75812429|ref|YP_320048.1| TPR repeat-containing protein [Anabaena variabilis ATCC 29413] gi|75705185|gb|ABA24859.1| TPR repeat protein [Anabaena variabilis ATCC 29413] Length = 306 Score = 39.3 bits (91), Expect = 0.62, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 55/155 (35%), Gaps = 22/155 (14%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + +F L+ ++ +LV ++ L +V + + + L N+ +A E Sbjct: 1 MNRFILSFSIAVTFAYLV----FAAPAHSLSTVKEPNAASVFLQSGIEKLLHGNYQEAIE 56 Query: 79 YFN-QCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 FN FA + + L YQ A + + + P++ V+ Sbjct: 57 NFNTAIEIQKDFAPAYSDRCL-----AYLELADYQSAIADCNQALKLTPDNIE---VHLN 108 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 G++Y ++ + + ++++ + Sbjct: 109 RGLAYYRL--------GEYRQAIADNNQVIVLKPD 135 >gi|325180730|emb|CCA15137.1| cell division cycle protein 16 putative [Albugo laibachii Nc14] Length = 769 Score = 39.3 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 3/56 (5%) Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE---AMARLVEAYVALALMDEAR 247 EIG Y K+ Y +A+ Q L + + + L AY L EA Sbjct: 624 EIGVVYYKQKRYTSAVESLQEALQACPNTASKQTFSVTLFNLASAYRKLGRYQEAE 679 >gi|281345478|gb|EFB21062.1| hypothetical protein PANDA_003771 [Ailuropoda melanoleuca] Length = 405 Score = 39.3 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 23/77 (29%), Gaps = 17/77 (22%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q + L +V +Y SP + + + LA K +R V Sbjct: 1 QGKIEEALSAFQELVRKYPQSPRARYGKA---QCEDDLAEK---------RRSNEV---- 44 Query: 212 RFQLVLANYSDAEHAEE 228 + + Y + + Sbjct: 45 -LRGAIETYQEVASLPD 60 >gi|255008442|ref|ZP_05280568.1| hypothetical protein Bfra3_04831 [Bacteroides fragilis 3_1_12] gi|313146167|ref|ZP_07808360.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313134934|gb|EFR52294.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 91 Score = 39.3 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 34/92 (36%), Gaps = 11/92 (11%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L + + G ++A +E++ P K D YYL+G +Y ++ + Sbjct: 3 QLKTIKELINQGDIEKALQALDEFLRTEPVGK--DEAYYLMGNAYRKL--------GDWQ 52 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 L +E +SP AR V N Sbjct: 53 KALNNYQSAIELNPDSP-ALQARKMVMDILNF 83 >gi|221123791|ref|XP_002167115.1| PREDICTED: similar to zinc finger, BED-type containing 4 [Hydra magnipapillata] Length = 2263 Score = 39.3 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 33/239 (13%), Positives = 71/239 (29%), Gaps = 65/239 (27%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ--CSRDFPFAGVARKSLLMSA 101 + + T +Y ++ K+ +F +A EY+ Q + ++ + + Sbjct: 1734 QKLVYQDGTHSCIADLLYNLGDVYQKKGSFDQAIEYYRQSLMINKQLYQDDPQQV-VANI 1792 Query: 102 F-----VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ---- 152 + Y+ G+++QA ++ ++I+ + DQ Sbjct: 1793 YNNLGAAYYAKGQHEQAIDSYDQ---------------------SLKIIKQIYKDQVLGV 1831 Query: 153 -------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI--------- 196 T + ++ Y S + E I Sbjct: 1832 AFSLNNLGVTYKARGEYDQAIKNYKQS----------LNIYKFIYQNETHITFADTLHNL 1881 Query: 197 GRYYLKRGEYVAAIPRFQLVLAN----YSDAEH--AEEAMARLVEAYVALALMDEAREV 249 G Y + ++ AI ++ L Y D H ++ L AY D+A + Sbjct: 1882 GLVYADQNQHKLAINYYEESLKMKNIIYQDKPHPSISYSLNDLGLAYSEKKQYDQAIKY 1940 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 82/300 (27%), Gaps = 92/300 (30%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-----------------EKAVLFLKEQ 71 S+A C +++ Y D+V + ++Y +F + Sbjct: 1145 SVADCLNNLGTAYNAKGQYNDAVKWNKASLKIYKFIYQNEPHLCIANSLNNLGEVFRNQG 1204 Query: 72 NFSKAYEYFNQ---CSRDF----PFAGVARKSLLMSAFVQY-----SAGKYQQAASLGEE 119 + KA + F + + F P + +A S + + +Y QA ++ Sbjct: 1205 QYEKAIKKFRKSLSIKKLFYKDEPHSDIA------SIYNNLGLVFGANEQYDQAIKCYKK 1258 Query: 120 YITQY-------PESKNVDYV-------------------YYLVGMSYAQMIRDVPYDQR 153 Y P V V YY ++ + +Q Sbjct: 1259 SKKIYQLVYKNEP-HPYVADVMNNLGIIYKSNLQYDQAIKYYRESLNIYKFFYQSDLNQS 1317 Query: 154 ATK----------------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 L+Y + E Y N Y + N L G Sbjct: 1318 VADIYNNLGLFYIAKNDNDTALKYCNLSFEIY-NRIYQDKPHPNIAYSLNNL-------G 1369 Query: 198 RYYLKRGEYVAAIPRFQLVLAN----YSDAEH--AEEAMARLVEAYVALALMDEAREVVS 251 Y + + AI F+ + Y D H +++ L Y + +A E Sbjct: 1370 LVYWAKEHFDNAINYFKESIKMKKLVYQDKNHPSVADSLNNLGSVYRNIGQCSKAMEYYK 1429 >gi|226320951|ref|ZP_03796499.1| tetratricopeptide repeat domain protein [Borrelia burgdorferi 29805] gi|226233653|gb|EEH32386.1| tetratricopeptide repeat domain protein [Borrelia burgdorferi 29805] Length = 1065 Score = 39.3 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117 + ++ NF ++ EY N F A+K ++ + ++ K +++ Sbjct: 827 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 880 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175 + I P + +Y YL + + + S ++E+ S Y+ Sbjct: 881 NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 929 Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222 A+ Y G A +E +G Y K Y AI F+ + N Sbjct: 930 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 986 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259 EA L + + A++++ ++ P+ Sbjct: 987 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1024 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK++N+ A ++ P + + A +G QA S E+ Sbjct: 894 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 950 Query: 120 YI 121 I Sbjct: 951 II 952 >gi|45655644|ref|YP_003453.1| thiol-disulfide interchange like protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45602615|gb|AAS72090.1| thiol-disulfide interchange like protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 357 Score = 39.3 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 17/153 (11%), Positives = 49/153 (32%), Gaps = 25/153 (16%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---------CSRDFPFAGVA 93 + + D + + ++ V + + + +SKA ++F + + Sbjct: 221 ENEYLENLTKDPQGIQTNFQAGVYYFEAKEYSKAIQFFQKAIDSNDSKNLEKKH------ 274 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 +L G ++ A S Y+++YP V V + +Y ++ Sbjct: 275 -DALFNLGISYLEIGNFKLAISTFNSYLSKYPNGDLVS-VLFFRANAYEEL--------N 324 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + +++E + + + + Sbjct: 325 LKEEAKADYKKVLELTLDPDEKQDLQMRIDSLN 357 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 14/99 (14%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 +Q+ + + +S K N G YL+ G + AI F Sbjct: 253 KAIQFFQKAI----DSNDSKNLEKKHDALFNL--------GISYLEIGNFKLAISTFNSY 300 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQ 254 L+ Y + + + AY L L +EA+ + +++ Sbjct: 301 LSKYPNGDLVS-VLFFRANAYEELNLKEEAKADYKKVLE 338 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 2/70 (2%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLA--NYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 + G YY + EY AI FQ + + + E +A+ L +Y+ + A + Sbjct: 239 FQAGVYYFEAKEYSKAIQFFQKAIDSNDSKNLEKKHDALFNLGISYLEIGNFKLAISTFN 298 Query: 252 LIQERYPQGY 261 +YP G Sbjct: 299 SYLSKYPNGD 308 >gi|37680187|ref|NP_934796.1| Flp pilus assembly protein TadD [Vibrio vulnificus YJ016] gi|37198934|dbj|BAC94767.1| Flp pilus assembly protein TadD [Vibrio vulnificus YJ016] Length = 246 Score = 39.3 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 51/177 (28%), Gaps = 37/177 (20%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 KFA + S+ LVG +S+ + A + + A + Sbjct: 2 KFASKLILSVVSILLVGCAAPASQ----------PSAESLNSLADTAFEYARYDSAKSKY 51 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE-------------YI----TQ 123 Q +P AR LM A + + A S ++ +I Sbjct: 52 QQVLDVYPEQPHAR---LMLARIDLLQDRPHAAQSQLQQLLTENADNAAEAAFILGRYQL 108 Query: 124 YPESKNVDYVYYLVGMSYAQMIRD------VPYD-QRATKLMLQYMSRIVERYTNSP 173 Y G++ + + D Q+ T Q+ R +E +S Sbjct: 109 NQGDALSASNYLQQGLALDEQHAGLHNLLAIALDEQQRTAQAKQHFLRAMELEPDSK 165 >gi|323498286|ref|ZP_08103288.1| tetratricopeptide repeat protein [Vibrio sinaloensis DSM 21326] gi|323316714|gb|EGA69723.1| tetratricopeptide repeat protein [Vibrio sinaloensis DSM 21326] Length = 389 Score = 39.3 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 56/192 (29%), Gaps = 50/192 (26%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A ++ +A + F Q + P A L+S + ++ +A Sbjct: 114 AKDYMVSGFLDRAEKIFEQLVEE-PDHREAALQQLVSIY--QQTREWSKAIH-------- 162 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPY-----------DQRATKLMLQYMSRIVERYTNS 172 Y LV + +M + + D K Q + + Sbjct: 163 --------YATLLVKLGRKRMRNSIAHFWCELAMQEKADGNDAKAA-QNFKKALSEDPKC 213 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 A G+ YL+ +Y AI ++VL D++ E + Sbjct: 214 VRASIAL-----------------GKSYLENEDYSNAIKYMEMVLE--QDSDFVSEVLPT 254 Query: 233 LVEAYVALALMD 244 L E Y L D Sbjct: 255 LAECYHHLGQED 266 >gi|194213450|ref|XP_001495951.2| PREDICTED: similar to Collagen prolyl 4-hydroxylase alpha III subunit [Equus caballus] Length = 548 Score = 39.3 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 34/102 (33%), Gaps = 11/102 (10%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA---- 93 + D+Y + ++ + ++ A + + F + Sbjct: 168 GSAVTDLYSPRRLFSLTADDCFQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEDE 227 Query: 94 ---RKSLLMSAFVQYSAGKYQQAASLGEEYITQY-PESKNVD 131 +L AF + AG A SL E++ Y P++K + Sbjct: 228 GSLEDALDHLAFAYFQAGNVSCALSLSREFL-LYSPDNKRMA 268 >gi|115528225|gb|AAI24850.1| LOC431836 protein [Xenopus laevis] Length = 508 Score = 39.3 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 58/188 (30%), Gaps = 28/188 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 E L ++A +++ P + +++ + A GK++ A Sbjct: 55 EMGRKLLAAGQLAEALTHYHAAVDGDPNNYLTYYKRAAVYLA-----MGKFRSALPDLSR 109 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I P+ ++ ++ Q + Q +++ N+ + Sbjct: 110 AIQLKPDF-----------LAARLQRGNILLKQGDVQEARQDFLSVLQSSPNNEEAQSQL 158 Query: 180 FYVTVG-RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 V RN A E +R +Y AI + V+ + A E Y+ Sbjct: 159 ERVQEVERNVGGASEAY------ERRDYYGAIALLEKVIEF---SPWDPSARELRAECYL 209 Query: 239 ALALMDEA 246 + + A Sbjct: 210 QVGELSNA 217 >gi|91202536|emb|CAJ72175.1| unknown protein [Candidatus Kuenenia stuttgartiensis] Length = 312 Score = 39.3 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 22/58 (37%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 VY + + ++ +A E F + D+ + +S L G Y+QA Sbjct: 197 VYRLGDCYFQSGDYKEALEVFRHLNNDYLNSEYQLQSRLKMGECCAKLGDYKQARKTL 254 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 42/131 (32%), Gaps = 44/131 (33%) Query: 105 YSAGKYQQAASLGEE-------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 Y G Y+ AASL + ++ N D++ Y +G Y Q K Sbjct: 168 YEQGDYKTAASLYGKGLDKSMPFL-------NEDFIVYRLGDCYFQS--------GDYKE 212 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQL-----AAKEVE----------------- 195 L+ + Y NS Y +R + +L A K + Sbjct: 213 ALEVFRHLNNDYLNSEYQLQSRLKMGECCAKLGDYKQARKTLYSVIAQEGDCKTEEDKSC 272 Query: 196 IGRYYLKRGEY 206 + Y K G+Y Sbjct: 273 VAESYFKIGDY 283 >gi|42525153|ref|NP_970533.1| hypothetical protein Bd3829 [Bdellovibrio bacteriovorus HD100] gi|39577364|emb|CAE81187.1| unknown protein [Bdellovibrio bacteriovorus HD100] Length = 251 Score = 39.3 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 36/153 (23%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQ 104 L+ +T ++ ++ ++ ++ A F + S A Sbjct: 121 VLNDLTYGNPEKAYINLGLVKFNQKEYAAARTSFGKVMD----------SQTDDCIANTY 170 Query: 105 Y-----SAGKYQQAASLGEEYI-----TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 Y Y +AA + I Y D +Y +SY ++ Sbjct: 171 YGRTFFEEKDYGRAAEALDRAIGFCQKNLY------DEPHYYSALSYYRLGEKS------ 218 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 + +++ Y Y A+ +++ R Sbjct: 219 --KSVARFEELIKYYPTGKYRDKAKGMLSLIRK 249 >gi|145495406|ref|XP_001433696.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124400815|emb|CAK66299.1| unnamed protein product [Paramecium tetraurelia] Length = 456 Score = 39.3 bits (91), Expect = 0.64, Method: Composition-based stats. Identities = 35/236 (14%), Positives = 69/236 (29%), Gaps = 57/236 (24%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + + K N+ KA E + + + + + A Y Y +A Sbjct: 129 NRGLAYDKMSNYHKAIEEYTKVFTIDKQY-YTSY-----FNRAIAYYKLKNYDRAVEDFS 182 Query: 119 EYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 I P +Y YY G Y ++ + + Q + Y + Sbjct: 183 TVIEINP-----EYYMAYYHRGEIY-ELQNKMDQASKDYVRASQLEPCLTIPYPQFKKIP 236 Query: 177 G------ARFYVTVGR-----NQLAAK-------EVE------------------IGRYY 200 + ++++ N LA E+ I Y Sbjct: 237 EKSSYETSYQHLSLAIQDQPDNILAYNNRGFVLFEMNQPLEALENYNKAIEIKPTIATLY 296 Query: 201 LKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSL 252 RG + +F+ + +YS + +A Y L DEA++ + + Sbjct: 297 YNRGNIAYFLNQFEKAIEDYSQTILIDPNYAKAYCNRGTIYKQLEKFDEAKKDIEI 352 >gi|332306165|ref|YP_004434016.1| Aspartyl/Asparaginyl beta-hydroxylase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173494|gb|AEE22748.1| Aspartyl/Asparaginyl beta-hydroxylase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 389 Score = 39.3 bits (91), Expect = 0.64, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 44/132 (33%), Gaps = 16/132 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + A+ L+ +A + F+ P ++ A+ Y + + + I Sbjct: 12 QSAIGLLQNGKMQQARKAFDTLCHQAPQ---LTQAWFGLAYACSQLQDYPASIAAIDNVI 68 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + P++ + + + + V DQ ++ L + ++ N + Sbjct: 69 QREPKN--------VKALI-FKADQLVYNDQE--RMALAFYEGALQLTANQQNLPDEIKR 117 Query: 182 VTVGRNQLAAKE 193 + LA +E Sbjct: 118 --GLKRGLALRE 127 >gi|300864251|ref|ZP_07109131.1| Stress protein (modular protein) [Oscillatoria sp. PCC 6506] gi|300337716|emb|CBN54277.1| Stress protein (modular protein) [Oscillatoria sp. PCC 6506] Length = 656 Score = 39.3 bits (91), Expect = 0.64, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 32/110 (29%), Gaps = 14/110 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + L L++ ++ A FNQ ++ L G QA + + Sbjct: 430 NQGSLKLEKADYRGAIADFNQAVSL---NQNLPQAYLGLGISHSKLGDNYQAIQYYNQAL 486 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + N Y+ G +Y +M + + + N Sbjct: 487 KF---NANFADAYFSRGQAYYEM--------GIKQKANADYEQTIRLNPN 525 Score = 35.5 bits (81), Expect = 8.7, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 31/97 (31%), Gaps = 13/97 (13%) Query: 71 QNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + +A +Y+ + FA + Y G Q+A + E+ I P Sbjct: 473 GDNYQAIQYYNQALKFNANFAD----AYFSRGQAYYEMGIKQKANADYEQTIRLNPN--- 525 Query: 130 VDYVY-YL-VGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y YL G I P + + + S+ Sbjct: 526 --YALAYLERGAIRY-QIGSKPQGLQDFRQAAELFSK 559 >gi|256822126|ref|YP_003146089.1| TPR repeat-containing protein [Kangiella koreensis DSM 16069] gi|256795665|gb|ACV26321.1| TPR repeat-containing protein [Kangiella koreensis DSM 16069] Length = 391 Score = 39.3 bits (91), Expect = 0.64, Method: Composition-based stats. Identities = 26/199 (13%), Positives = 61/199 (30%), Gaps = 44/199 (22%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC--------SRDFPFAGVARKSLLMS 100 ++ +Y+ + + + +A F + L++ Sbjct: 102 PQLSSDDRNTALYQLGLDYNAVGMYDRAVSLFTELLEDPEHKSESLH---------QLLN 152 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + + QAA + E+ + E ++ ++ + D + K L Sbjct: 153 IY--QLTKDWDQAAKVAEQLQSSMGEEQSKPLAHF------YCELADQKRSEGDIKAALA 204 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 + + + +S + G YL++ + AI +Q +L Sbjct: 205 NLKKGLSINPDSVRASILQ-----------------GDIYLQQKSFKQAIKSYQRILK-- 245 Query: 221 SDAEHAEEAMARLVEAYVA 239 D EA+ ++ EAY Sbjct: 246 QDIAFLPEALPKIAEAYNE 264 >gi|218780013|ref|YP_002431331.1| hypothetical protein Dalk_2170 [Desulfatibacillum alkenivorans AK-01] gi|218761397|gb|ACL03863.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum alkenivorans AK-01] Length = 633 Score = 39.3 bits (91), Expect = 0.64, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 5/119 (4%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 F A+ +G Q ++ + + + +Y+ +L ++ +A YFN+ Sbjct: 482 IFLGALMARLGMLHQGAKYIQRGLTLEPDNYKGLYQMGMLLMRANKPEEALTYFNKSVEL 541 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK--NVDYVYYLVGMSYAQ 143 P A ++ G Q+A + I P + +Y L M + Sbjct: 542 EP--RYAP-AVHNQGLAYQVLGDQQKAQQCIKRSIELAPTDPRGHHNYAMLLKKMGDYE 597 >gi|147919209|ref|YP_687056.1| hypothetical protein RCIX2685 [uncultured methanogenic archaeon RC-I] gi|110622452|emb|CAJ37730.1| hypothetical protein RCIX2685 [uncultured methanogenic archaeon RC-I] Length = 365 Score = 39.3 bits (91), Expect = 0.64, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 39/122 (31%), Gaps = 20/122 (16%) Query: 71 QNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 N +A + F + P + + Y G+ +A + + + P+ Sbjct: 64 GNLEEAEKSFKDALRIDDKHPG------AHSDLGNLYYCLGRLDEALAELQRSLEIDPQQ 117 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 +Y +G+ Y +M RD ++ + + + + A + Sbjct: 118 HL---AHYRLGLVYLRMDRD--------DEAIEELKKTISLKPSYADAYTALGRTYGLQG 166 Query: 188 QL 189 +L Sbjct: 167 RL 168 >gi|118387255|ref|XP_001026739.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89308506|gb|EAS06494.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 1417 Score = 39.3 bits (91), Expect = 0.64, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 44/131 (33%), Gaps = 23/131 (17%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSR---DFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 + +K + F + NF +A EYFN+ + + F K QA Sbjct: 12 LLQKGLEFQESGNFDEAVEYFNRVLNINLNH------EDANYNLGFTYEKQDKLDQALEC 65 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 ++ I+ P Y+ I V ++Q ++++ + +E N Y Sbjct: 66 YKKVISINPS--------YIKA---YVSIARVYFNQDNLDESIKFLEKAIEIDPN--YA- 111 Query: 177 GARFYVTVGRN 187 A + Sbjct: 112 EAYERLGWVYE 122 >gi|332710566|ref|ZP_08430511.1| serine/threonine protein kinase [Lyngbya majuscula 3L] gi|332350621|gb|EGJ30216.1| serine/threonine protein kinase [Lyngbya majuscula 3L] Length = 726 Score = 38.9 bits (90), Expect = 0.65, Method: Composition-based stats. Identities = 25/206 (12%), Positives = 57/206 (27%), Gaps = 49/206 (23%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + +K +N+ A F++ + P + ++ + ++ +Y+ A + + Sbjct: 455 GNVQVKSKNYFDAIASFDKALKLKPDSY---QAWYRRGWALHNLRRYKAAVESYDRALDY 511 Query: 124 YPESKNVDYVYYLVG--MSYAQMIRDVPYDQRAT------------------------KL 157 P S +Y G +S + +D + + Sbjct: 512 KPNS---AEAWYQRGNDLSNLRKYKDAAKSYQQAVQFQPNFYQAWYSWGNTLNQLGKYQE 568 Query: 158 MLQYMSRIVERYTNS-----------------PYVKGARFYVTVGRNQLAAKEVEIGRYY 200 L + V+ S A + +++ G + Sbjct: 569 ALGSFDQAVKLQPKSYQAWYSRGWTLHQVQRYEDALEAYYKAIKLKSKPYQAWYSRGNTF 628 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHA 226 K Y AI +Q + D A Sbjct: 629 YKLERYKDAIASYQQAVNYKPDYSQA 654 Score = 38.9 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 60/190 (31%), Gaps = 36/190 (18%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + + +A F+Q + P + ++ + + +Y+ A + Sbjct: 554 YSWGNTLNQLGKYQEALGSFDQAVKLQPKSY---QAWYSRGWTLHQVQRYEDALEAYYKA 610 Query: 121 ITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I K+ Y +Y G ++ ++ R K + + V + Y + Sbjct: 611 IKL----KSKPYQAWYSRGNTFYKLER--------YKDAIASYQQAVNYKPD--YSQ--- 653 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 A + +KR +Y AI + + Y + EA+ A Sbjct: 654 ----------AWYSLGNAL--VKRNKYKKAIAAYDKAVR-YQ--PNYREAIKARERANSE 698 Query: 240 LALMDEAREV 249 L +E+ Sbjct: 699 LEAQKREQEI 708 >gi|321465641|gb|EFX76641.1| hypothetical protein DAPPUDRAFT_54951 [Daphnia pulex] Length = 825 Score = 38.9 bits (90), Expect = 0.65, Method: Composition-based stats. Identities = 11/105 (10%), Positives = 34/105 (32%), Gaps = 10/105 (9%) Query: 18 QLYKFALTIFFSIAVCFLVG--------WERQSSRDVYLDSVTDVRYQREVYEKAVLFLK 69 ++ L + +A+ + + + + ++ L Sbjct: 543 RMAMAHLNMGLVLALMGMKDEAIEVYRRCSQLDGSGLKDPRTHETTKISALFNLGRLHAD 602 Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLL-MSAFVQYSAGKYQQA 113 + ++KA + +N+ + P +SL M + + ++A Sbjct: 603 DGQYTKAIDVYNEAIQRMP-THYQPQSLYNMLGEAYFKLDRLKEA 646 >gi|281353153|gb|EFB28737.1| hypothetical protein PANDA_003344 [Ailuropoda melanoleuca] Length = 456 Score = 38.9 bits (90), Expect = 0.65, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 42/130 (32%), Gaps = 17/130 (13%) Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70 + + + + A +F +A + D+Y + ++ + Sbjct: 78 LQDVYMLNVKGLARGVFQRVAGSAVT--------DLYSPRRLFSLTADDCFQVGKVAYDM 129 Query: 71 QNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ A + + F + +L AF + AG A SL E++ Sbjct: 130 GDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFQAGNVSCALSLSREFL 189 Query: 122 TQYPESKNVD 131 P++K + Sbjct: 190 LYSPDNKRMA 199 >gi|282879531|ref|ZP_06288262.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1] gi|281306479|gb|EFA98508.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1] Length = 232 Score = 38.9 bits (90), Expect = 0.65, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 50/138 (36%), Gaps = 17/138 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +KA L L+ + + A + ++Q R P L A+ G+Y A E + Sbjct: 58 KKAALNLQLEQWQYAKDEYDQVLRSHPDN---IAGLYYRAYANQQLGRYNFARLDYENLL 114 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P + +G++ + + ++R+V ++ +S AR Sbjct: 115 KVVPGHFSA-----QLGLALLNQKD------KHHTEAMNQINRLVNQFPDSAVAYAARAG 163 Query: 182 VTVGRNQLAAKEVEIGRY 199 + + + E+ + Y Sbjct: 164 MEQEQGMI---ELAVYDY 178 >gi|187934587|ref|YP_001885851.1| hypothetical protein [Clostridium botulinum B str. Eklund 17B] gi|187722740|gb|ACD23961.1| tetratricopeptide repeat protein [Clostridium botulinum B str. Eklund 17B] Length = 1094 Score = 38.9 bits (90), Expect = 0.65, Method: Composition-based stats. Identities = 29/228 (12%), Positives = 70/228 (30%), Gaps = 34/228 (14%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE--QNFSKAYEYFNQC 83 F ++ C+ + + + + Y + +Y + + +++KA E + Sbjct: 791 AFVNLGYCYGLLEDYTKAIECYTRGLEITGGNEYIYNQLGNLYENDLNDYNKAIENYKNV 850 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + P R A Y ++ + E+ I + Y+Y +G+ Y Sbjct: 851 MKLNP---EDRNGYSDIANCYRKLEDYSESLTYYEKQIE---ATGKTAYLYNCIGVLYEI 904 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 + + ++ + VE A + + E +YY K+ Sbjct: 905 RFENY-------EKAIENYKKAVELDPEHK---DAYKNIGDCYEKAWDNHEEAIKYYKKQ 954 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 +Y+ D ++ ++Y L + A+ Sbjct: 955 EKYL-------------DDTRKI--SLEI-ADSYDQLGKTESAKNYYR 986 >gi|114051830|ref|NP_001040185.1| DnaJ (Hsp40) homolog 9 [Bombyx mori] gi|87248313|gb|ABD36209.1| DnaJ-like protein isoform A [Bombyx mori] gi|253721959|gb|ACT34043.1| DnaJ-9 [Bombyx mori] gi|257122608|gb|ACV41273.1| DNAJ9 [Bombyx mori] Length = 515 Score = 38.9 bits (90), Expect = 0.65, Method: Composition-based stats. Identities = 20/159 (12%), Positives = 53/159 (33%), Gaps = 19/159 (11%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++E A L ++ + ++C ++ K L A G+ Q+A + + Sbjct: 162 LHEDAQRALDANDYRRVVFCMDRCLD---YSPSCTKCKLTKAECLALLGRCQEAQEIAND 218 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + +S++ + Y+ G+ RD + ++ +++ + Sbjct: 219 LLRL--DSQDTE-AIYVRGLCLYFEDRD--------EQAFKHFQQVLRLNPDHKKAVETY 267 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + + + G K G + A+ + L Sbjct: 268 KRAKLLKQKKEE-----GNEAFKMGRWQQALALYNEALT 301 >gi|15605416|ref|NP_220202.1| TPR-motif-containing protein [Chlamydia trachomatis D/UW-3/CX] gi|76789423|ref|YP_328509.1| TPR repeat-containing protein [Chlamydia trachomatis A/HAR-13] gi|237805034|ref|YP_002889188.1| tetratricopeptide repeat protein [Chlamydia trachomatis B/TZ1A828/OT] gi|255311510|ref|ZP_05354080.1| tetratricopeptide repeat protein [Chlamydia trachomatis 6276] gi|255317812|ref|ZP_05359058.1| tetratricopeptide repeat protein [Chlamydia trachomatis 6276s] gi|3329135|gb|AAC68278.1| TPR-motif protein [Chlamydia trachomatis D/UW-3/CX] gi|76167953|gb|AAX50961.1| tetratricopeptide repeat family protein [Chlamydia trachomatis A/HAR-13] gi|231273334|emb|CAX10249.1| tetratricopeptide repeat protein [Chlamydia trachomatis B/TZ1A828/OT] gi|296437154|gb|ADH19324.1| tetratricopeptide repeat protein [Chlamydia trachomatis G/11222] gi|297748814|gb|ADI51360.1| Tetratricopeptide repeat family protein [Chlamydia trachomatis D-EC] gi|297749694|gb|ADI52372.1| Tetratricopeptide repeat family protein [Chlamydia trachomatis D-LC] Length = 335 Score = 38.9 bits (90), Expect = 0.65, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 17/148 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + +Y KAV+ ++ A + + P K+ + ++ + + Sbjct: 141 DPWNPQGLYNKAVVLSDMEDEEGAIDLLESTVKRNPL-YW--KAWVKLGYLLSRNKIWDR 197 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A E + P ++ +Y +G+ Y + + T+L L+ + N+ Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQESLLL--NA 244 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYY 200 A FY+ + L E +Y Sbjct: 245 EDA-DAHFYIGLAHMDLKQNEQAYDAFY 271 >gi|50120884|ref|YP_050051.1| tetratricopeptide repeat protein [Pectobacterium atrosepticum SCRI1043] gi|49611410|emb|CAG74858.1| conserved hypothetical protein [Pectobacterium atrosepticum SCRI1043] Length = 389 Score = 38.9 bits (90), Expect = 0.65, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 60/178 (33%), Gaps = 28/178 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ + +A E FNQ + F A + L+ + + A + E+ + Sbjct: 114 GRDYMAAGLYDRAEEIFNQLVDEEDFRRSALQ-QLLQI--HQATSDWLTAIDVAEKLVKM 170 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 + VD ++ ++ M D D L ++ Sbjct: 171 GKDELRVDIAHFYCELALLAMGSD-DLD-----KALTFL-----------------KKGA 207 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 NQ A + +GR Y+ + +Y A+ + VL D E E + L E Y L Sbjct: 208 SADNQCARASIMMGRIYMAQQDYSRAVEALRQVLD--QDKELVSETLPMLQECYQHLG 263 >gi|281212595|gb|EFA86755.1| tetratricopeptide-like helical domain-containing protein [Polysphondylium pallidum PN500] Length = 550 Score = 38.9 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 7/67 (10%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + + ++ F +A + F + R P + +S Y +Y A E+ Sbjct: 362 NQGIEHFRKHEFPEAIKSFEEAIRRNPVDHTIYSNRSA-----AYYKLTEYPLAVKDAEK 416 Query: 120 YITQYPE 126 I P Sbjct: 417 TIELAPN 423 >gi|257457386|ref|ZP_05622557.1| cyclic nucleotide-binding protein [Treponema vincentii ATCC 35580] gi|257445308|gb|EEV20380.1| cyclic nucleotide-binding protein [Treponema vincentii ATCC 35580] Length = 344 Score = 38.9 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 1/86 (1%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ A +K++ ++ AY+ ++ + + L +A Y +Y + LG + Sbjct: 224 FQLAEDLVKQEKWADAYKQYHTIIEMKQGTKL-EAAYLGAARCLYKQAEYVRCIQLGTGF 282 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIR 146 ITQ+P+S + + L+G+ Y M R Sbjct: 283 ITQFPKSLKLAEILMLLGLCYQGMDR 308 >gi|255505888|ref|ZP_05348668.3| putative tetratricopeptide repeat-containing domain protein [Bryantella formatexigens DSM 14469] gi|255265370|gb|EET58575.1| putative tetratricopeptide repeat-containing domain protein [Bryantella formatexigens DSM 14469] Length = 493 Score = 38.9 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 10/75 (13%), Positives = 23/75 (30%), Gaps = 11/75 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYF----NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 Y + + +++ A E + + +F Y+ G + A Sbjct: 363 YNEGATAYAQGDYATAAEKLAQAVETDDNQY-------DAWYYLSFAYYNLGDTENADKA 415 Query: 117 GEEYITQYPESKNVD 131 E+ I ++P Sbjct: 416 FEQTIQKFPAQAQAA 430 >gi|260806523|ref|XP_002598133.1| hypothetical protein BRAFLDRAFT_123282 [Branchiostoma floridae] gi|229283405|gb|EEN54145.1| hypothetical protein BRAFLDRAFT_123282 [Branchiostoma floridae] Length = 1925 Score = 38.9 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 39/160 (24%), Gaps = 31/160 (19%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A V Y A + I P+ YY Y + + L L+ Sbjct: 1245 AEVYRKQDDYTSAIVNYTQAIKLQPDDHE---AYYYRAEMYEKKGDML--------LALE 1293 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 ++ + G YY G ++ A+ F +L Sbjct: 1294 DFAQATRLMPS---------RTEAVMKH--------GLYYFNNGNWIGAVNDFTALL--- 1333 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + A AY A E +S P Sbjct: 1334 QQEPNNAIARTYRGRAYAQQGHYSSAVEDLSAAIHLDPNN 1373 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 55/172 (31%), Gaps = 39/172 (22%) Query: 106 SAGKYQQAASLGEEYITQ-------YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A ++++A + I P VYY +G+S+ ++ + + Sbjct: 1591 KAKQFEEAVGTYKRAIQLLTPWQAKQPMPWEAAEVYYYLGLSHLELFQYMD--------A 1642 Query: 159 LQYMSRIVERYTNSPYVKGARFY------------VTVGRNQLA------AKEVEIGRYY 200 L+ + ++ + Y + + LA + YY Sbjct: 1643 LEAFNNALKVNPS--YAEAYYQRGLTRLRLKQSKGIQDFNRALALDPYIFQAFLSRAAYY 1700 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHA---EEAMARLVEAYVALALMDEAREV 249 +G Y AI + ++ A A+ V+ Y LA+ D ++ Sbjct: 1701 GMKGRYTKAIMNCNEAIKLQPNSVRAYLYRGALKYYVKTY-KLAVKDLSKAA 1751 >gi|307152973|ref|YP_003888357.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822] gi|306983201|gb|ADN15082.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822] Length = 277 Score = 38.9 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 81/249 (32%), Gaps = 53/249 (21%) Query: 22 FALTIFFSIAVC---FLVGWERQSSRDVYLDSVTDVRYQR--EVYEKAVLFLKEQNFSKA 76 LT+ + F G + + V S+T+ + ++ + +KA + +F A Sbjct: 7 ILLTVVLIWSGAGNEFRTGGQSAWAEPVVSSSITEQQIKQGEALAQKAFEATDKGDFPAA 66 Query: 77 YEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 +Y+ Q FP + + Q+ +A + + I P+S + Sbjct: 67 EQYWTQLIEQFPTNPAVWSNRGNCRV--SQFK---LDEAIADFNKAIELAPDSPDP---- 117 Query: 135 YL-VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 YL G ++ R + ++++ + P Sbjct: 118 YLNRGTAFEAQERYS--------EAIADYNQVLALDPSDPMA------------------ 151 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSD----AEHAEEAMARLVEAYVALALMDEAREV 249 Y RG ++ +Q LA+Y A + A A + A +EA Sbjct: 152 ------YNNRGNAQGSLGHWQEALADYQKAIDIAPNFSFAQANVALALYETGHKEEATRK 205 Query: 250 VSLIQERYP 258 + + +YP Sbjct: 206 MRSLVRKYP 214 >gi|134055728|emb|CAK44101.1| unnamed protein product [Aspergillus niger] Length = 756 Score = 38.9 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YLK ++ AA+ + VL SD E +E+A+ R +A LA +E+ +V ++ +P Sbjct: 247 YLKTHQFDAALYDLKTVL---SDQESSEKALFRKSQALYHLARFEESCKVHQVLFATFPN 303 Query: 260 GYWAR 264 A+ Sbjct: 304 NTAAK 308 >gi|47124915|gb|AAH70700.1| LOC431836 protein [Xenopus laevis] Length = 505 Score = 38.9 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 58/188 (30%), Gaps = 28/188 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 E L ++A +++ P + +++ + A GK++ A Sbjct: 52 EMGRKLLAAGQLAEALTHYHAAVDGDPNNYLTYYKRAAVYLA-----MGKFRSALPDLSR 106 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I P+ ++ ++ Q + Q +++ N+ + Sbjct: 107 AIQLKPDF-----------LAARLQRGNILLKQGDVQEARQDFLSVLQSSPNNEEAQSQL 155 Query: 180 FYVTVG-RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 V RN A E +R +Y AI + V+ + A E Y+ Sbjct: 156 ERVQEVERNVGGASEAY------ERRDYYGAIALLEKVIEF---SPWDPSARELRAECYL 206 Query: 239 ALALMDEA 246 + + A Sbjct: 207 QVGELSNA 214 >gi|34541550|ref|NP_906029.1| TPR domain-containing protein [Porphyromonas gingivalis W83] gi|34397867|gb|AAQ66928.1| TPR domain protein [Porphyromonas gingivalis W83] Length = 1160 Score = 38.9 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 30/72 (41%) Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 + + ++ + ++ +L Y + E + + RL Y + EA +LI + Sbjct: 612 AVFNERMEKFDESADTYETLLRRYPNYEKKMDVLYRLFMLYTRMNNKPEAERCRALILQY 671 Query: 257 YPQGYWARYVET 268 YP+ A+ + Sbjct: 672 YPEDNLAKALSN 683 >gi|190574022|ref|YP_001971867.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a] gi|190011944|emb|CAQ45565.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a] Length = 212 Score = 38.9 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 6/90 (6%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 +IA+ + GW+ D + Y+KA++ L++ A + Sbjct: 31 VAIAIGAIAGWQW-----YQKDQGGKLASANVEYQKALVGLQQNKLDDAAKAVKALEA-G 84 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 P + + L A Q AGK ++A + Sbjct: 85 PSSIYGDLAALQLAKAQVDAGKNEEALATL 114 >gi|150402041|ref|YP_001329335.1| hypothetical protein MmarC7_0114 [Methanococcus maripaludis C7] gi|150033071|gb|ABR65184.1| TPR repeat-containing protein [Methanococcus maripaludis C7] Length = 602 Score = 38.9 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 50/144 (34%), Gaps = 42/144 (29%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--------------RKSL------LMS- 100 + + + NF K+ E F++ R P+ A K++ L Sbjct: 33 DSGLEYFGNGNFEKSIESFDETLRINPYNMEALVSKGYILYAINESEKAIECFDKALEIN 92 Query: 101 ----------AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 + + +Y++A ++ + Y E+ VYY+ G S + R Sbjct: 93 SDYYDTWQYKGYALHDLERYEEAIECFDKSLEIYEENPE---VYYMKGASLYGLER---- 145 Query: 151 DQRATKLMLQYMSRIVERYTNSPY 174 + ++ + +E Y N+ Y Sbjct: 146 ----YEEAIECLDIALETYPNNIY 165 >gi|311748682|ref|ZP_07722467.1| gliding motility-related protein TPR repeat-containing protein [Algoriphagus sp. PR1] gi|126577215|gb|EAZ81463.1| gliding motility-related protein TPR repeat-containing protein [Algoriphagus sp. PR1] Length = 874 Score = 38.9 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 51/173 (29%), Gaps = 19/173 (10%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + + +Q+ E + QYPES YYL+ ++ D+ QY+S Sbjct: 551 YFDLEEIEQSIDNLETLVRQYPESSRKPEAYYLLYLA--------QKDRGGNFQ--QYVS 600 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLA------AKEVEIGRYYLKRGEYVAAIPRFQLVL 217 R+ + S Y LA E YY G + A Q L Sbjct: 601 RLNNEFPGSQYTYSVNNP-DAASGNLAYLASSKRYESAYEAYYD--GNFNNARTIIQQTL 657 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 Y + E + + L RE + + ++ Sbjct: 658 EEYPLTRNTERLLLLDIMVTGKLESRQSYREKLESYIQNSKDEELKDLARNML 710 >gi|219850611|ref|YP_002465044.1| TPR repeat-containing serine/threonine protein kinase [Chloroflexus aggregans DSM 9485] gi|219544870|gb|ACL26608.1| serine/threonine protein kinase with TPR repeats [Chloroflexus aggregans DSM 9485] Length = 863 Score = 38.9 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 16/123 (13%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + ++ Y + A ++ + P+ G++ + R + +D Sbjct: 639 AQAALGWLAYRDDQTDAAKQAFQQALQLNPKE----------GLALFGLGR-LAFDDENF 687 Query: 156 KLMLQYMSRIVERYTN--SPYVKGARFYVTVGRNQLAAKEVEIGRYYLK-RGEYVAAIPR 212 + L Y + ++ + S Y + G A E G +Y + Y A+ R Sbjct: 688 EQALDYFQQTIDANPDFASAYAYLGETKLFTGFQN-ADNE-TAGDWYSQAEEAYREALNR 745 Query: 213 FQL 215 Sbjct: 746 NDY 748 >gi|312148550|gb|ADQ31209.1| Surface-located membrane protein 1 (LMP1) [Borrelia burgdorferi JD1] Length = 1065 Score = 38.9 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117 + ++ NF ++ EY N F A+K ++ + ++ K +++ Sbjct: 827 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 880 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175 + I P + +Y YL + + + S ++E+ S Y+ Sbjct: 881 NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 929 Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222 A+ Y G A +E +G Y K Y AI F+ + N Sbjct: 930 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 986 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259 EA L + + A++++ ++ P+ Sbjct: 987 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1024 Score = 37.8 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK++N+ A ++ P + + A +G QA S E+ Sbjct: 894 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 950 Query: 120 YI 121 I Sbjct: 951 II 952 >gi|258591587|emb|CBE67888.1| exported protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 181 Score = 38.9 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 60/181 (33%), Gaps = 32/181 (17%) Query: 21 KFALTIFFSIAVCFLVGWERQS---------SRDVYLDSVTDVR-YQREV---YEKAVLF 67 + + + ++AV FL+G+ + S V + + E+ + A Sbjct: 11 RLIIMLGSTLAVGFLLGYLASAFVPLVQSPQSPAVSPSAAPGPKLSPSEIDSALKAAHAS 70 Query: 68 LKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 L + A+E ++Q R+ ++L + + + +A L + ++ Sbjct: 71 LDAGDLQAAWEKYHQILLTDRNH------IEALTHLGVILTQSNQPDEAIKLYDRALSLN 124 Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 P+ Y + + D + + Q +V +S K + ++ Sbjct: 125 PQ-----YAH---ALFDKGQALQAKGDAKGATEVFQRFLALVP--PDSDDAKRVKGWIAE 174 Query: 185 G 185 Sbjct: 175 L 175 >gi|220934586|ref|YP_002513485.1| hypothetical protein Tgr7_1413 [Thioalkalivibrio sp. HL-EbGR7] gi|219995896|gb|ACL72498.1| hypothetical protein Tgr7_1413 [Thioalkalivibrio sp. HL-EbGR7] Length = 236 Score = 38.9 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 31/97 (31%), Gaps = 13/97 (13%) Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 E + + A F + G+ ++ ++ E+ + P + Y +YL Sbjct: 141 AERIEAAATQH-YNRWA--------FRLHQEGQDARSLAVVEKSLAHNPRN---AYAHYL 188 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 G+ + + D D R + R + Sbjct: 189 RGLIHHKA-GDRQRDLRLLREAKAAYERALSLDPGHQ 224 >gi|169608656|ref|XP_001797747.1| hypothetical protein SNOG_07413 [Phaeosphaeria nodorum SN15] gi|160701690|gb|EAT84879.2| hypothetical protein SNOG_07413 [Phaeosphaeria nodorum SN15] Length = 818 Score = 38.9 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 49/134 (36%), Gaps = 30/134 (22%) Query: 69 KEQNFS---KAYEYFNQCSRDFP--FAGVARKSLL----------MSAFVQYSAGKYQQA 113 + N++ +A EY + S+ +P + ++++ + Y +Y+ A Sbjct: 258 QSTNYTSQEQAIEYLEK-SQKYPKAYEAY-QQAVYRDGRNPTFWCSIGVLYYQINQYRDA 315 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 I P N+ V+Y +G + + + D L R + ++ Sbjct: 316 LDAYSRAIRLNP---NISEVWYDLG-TLYESCNNQTAD------ALDAYQRAADLDPSNV 365 Query: 174 YVKGARFYVTVGRN 187 ++ + + + +N Sbjct: 366 HI---KARLQLLQN 376 >gi|126337335|ref|XP_001366332.1| PREDICTED: similar to p58 [Monodelphis domestica] Length = 504 Score = 38.9 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 36/114 (31%), Gaps = 4/114 (3%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAASL 116 ++ E A ++E + A + + P +S K +A Sbjct: 269 NKLIESAEELIREGRYVDAVSKYESVMKTEPNTPVYTIRSKERICHCFSKDEKPVEAIKA 328 Query: 117 GEEYITQYPESKNV--DYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 E + P + N D YL+ Y + I+D Q + Q + + Sbjct: 329 CSEVLQLEPANVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEK 382 >gi|73965122|ref|XP_849894.1| PREDICTED: similar to Cell division cycle protein 27 homolog (CDC27Hs) (H-NUC) isoform 2 [Canis familiaris] Length = 831 Score = 38.9 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 593 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 642 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 643 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 698 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 699 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 753 Query: 237 YVALALMDEA 246 Y L A Sbjct: 754 YKKLGQTHLA 763 >gi|15642937|ref|NP_227978.1| hypothetical protein TM0163 [Thermotoga maritima MSB8] gi|4980657|gb|AAD35256.1|AE001701_9 hypothetical protein TM_0163 [Thermotoga maritima MSB8] Length = 278 Score = 38.9 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 24/74 (32%), Gaps = 13/74 (17%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFN-------QCSRDFPFAGVARKSLLMSAFVQYS 106 V ++Y A+ E ++ +A E F P L Y+ Sbjct: 17 VSVANDLYSSALSAYLEGDYRRALELFENALREDPTIEERDP------LVKLKMGICAYA 70 Query: 107 AGKYQQAASLGEEY 120 G Y++A + + Sbjct: 71 IGDYEKARAYLSNF 84 >gi|78050040|ref|YP_366215.1| polysaccharide deacetylase precursor [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038470|emb|CAJ26215.1| Polysaccharide deacetylase precursor [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 900 Score = 38.9 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 40/126 (31%), Gaps = 18/126 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E+ + KE+ ++ A E F + + P A + FV Y G++ ++A E + Sbjct: 791 ERGLQLYKEKRYADAAEQFAEALKLRP--DFA-LAANNLGFVYYRQGRFAESARWLENTL 847 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGAR 179 P ++Y + D+ + + + AR Sbjct: 848 KIDPS----------RAVAYLNLGDAYAKAGDRDKARKAYATYLELQ---PQGSGAEQAR 894 Query: 180 FYVTVG 185 + Sbjct: 895 AQLQSL 900 >gi|116204629|ref|XP_001228125.1| hypothetical protein CHGG_10198 [Chaetomium globosum CBS 148.51] gi|88176326|gb|EAQ83794.1| hypothetical protein CHGG_10198 [Chaetomium globosum CBS 148.51] Length = 883 Score = 38.9 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 46/140 (32%), Gaps = 22/140 (15%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSA 107 D + Y +++ Q + KAYE + Q P + Y Sbjct: 287 AADNSDAQSWYLLGRCYMQMQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQI 340 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y+ A I P + V+Y +G + + + D L R E Sbjct: 341 NQYRDALDAYSRAIRLNP---WISEVWYDLG-TLYESCNNQIAD------ALDAYQRAAE 390 Query: 168 RYTNSPYVKGARFYVTVGRN 187 ++P++ + + + RN Sbjct: 391 LDPSNPHI---KTRLQLLRN 407 >gi|303240066|ref|ZP_07326587.1| TPR repeat-containing protein [Acetivibrio cellulolyticus CD2] gi|302592335|gb|EFL62062.1| TPR repeat-containing protein [Acetivibrio cellulolyticus CD2] Length = 245 Score = 38.9 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 29/80 (36%), Gaps = 8/80 (10%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + Y +G+Y +A + + + D YY + S+ L + Sbjct: 167 GYDNYKSGQYDKAIDNLQNSLKLTDKEYYSDDCYYFIAYSHLNKDNKY--------LAKE 218 Query: 161 YMSRIVERYTNSPYVKGARF 180 M+ ++ +Y +S Y A Sbjct: 219 TMNNLLTKYPDSTYKNDATE 238 Score = 35.5 bits (81), Expect = 7.7, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 1/101 (0%) Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRY-YLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 S ++ N+ A+ E I Y K G+Y AI Q L ++++ Sbjct: 141 SKNALDMYNNLSALSNKKASLEFYIDGYDNYKSGQYDKAIDNLQNSLKLTDKEYYSDDCY 200 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 + +++ A+E ++ + +YP + +K Sbjct: 201 YFIAYSHLNKDNKYLAKETMNNLLTKYPDSTYKNDATEFLK 241 >gi|296436226|gb|ADH18400.1| tetratricopeptide repeat protein [Chlamydia trachomatis G/9768] gi|296438086|gb|ADH20247.1| tetratricopeptide repeat protein [Chlamydia trachomatis G/11074] gi|297140587|gb|ADH97345.1| tetratricopeptide repeat protein [Chlamydia trachomatis G/9301] Length = 335 Score = 38.9 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 17/148 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + +Y KAV+ ++ A + + P K+ + ++ + + Sbjct: 141 DPWNPQGLYNKAVVLSDMEDEEGAIDLLESTVKRNPL-YW--KAWVKLGYLLSRNKIWDR 197 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A E + P ++ +Y +G+ Y + + T+L L+ + N+ Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQESLLL--NA 244 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYY 200 A FY+ + L E +Y Sbjct: 245 EDA-DAHFYIGLAHMDLKQNEQAYDAFY 271 >gi|296201741|ref|XP_002748164.1| PREDICTED: cell division cycle protein 27 homolog isoform 2 [Callithrix jacchus] Length = 830 Score = 38.9 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 22/190 (11%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 592 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 641 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 642 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 697 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 + +N L +Y +A+ + + + + Sbjct: 698 LNKAIIIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 752 Query: 237 YVALALMDEA 246 Y L A Sbjct: 753 YKKLGQTHLA 762 >gi|255349073|ref|ZP_05381080.1| tetratricopeptide repeat protein [Chlamydia trachomatis 70] gi|255503611|ref|ZP_05382001.1| tetratricopeptide repeat protein [Chlamydia trachomatis 70s] gi|255507290|ref|ZP_05382929.1| tetratricopeptide repeat protein [Chlamydia trachomatis D(s)2923] gi|289525727|emb|CBJ15208.1| tetratricopeptide repeat protein [Chlamydia trachomatis Sweden2] gi|296435297|gb|ADH17475.1| tetratricopeptide repeat protein [Chlamydia trachomatis E/150] gi|296439015|gb|ADH21168.1| tetratricopeptide repeat protein [Chlamydia trachomatis E/11023] Length = 335 Score = 38.9 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 17/148 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + +Y KAV+ ++ A + + P K+ + ++ + + Sbjct: 141 DPWNPQGLYNKAVVLSDMEDEEGAIDLLESTVKRNPL-YW--KAWVKLGYLLSRNKIWDR 197 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A E + P ++ +Y +G+ Y + + T+L L+ + N+ Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQESLLL--NA 244 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYY 200 A FY+ + L E +Y Sbjct: 245 EDA-DAHFYIGLAHMDLKQNEQAYDAFY 271 >gi|195037969|ref|XP_001990433.1| GH18243 [Drosophila grimshawi] gi|193894629|gb|EDV93495.1| GH18243 [Drosophila grimshawi] Length = 281 Score = 38.9 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 44/145 (30%), Gaps = 15/145 (10%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAG 108 + ++ + K ++A E + + P + +++L A + Sbjct: 102 AANKEQADKLKLEGNELFKNDEPARAVEIYTEALNICPSSNSKERAVLFGNRAAAKMKLE 161 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + A + I YPE Y+ + + + D R L R+ E Sbjct: 162 ANKSAIDDCTKAIDLYPE--------YVRAL--LRRAKLYEQDDRP-DEALADYKRVNEI 210 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKE 193 + A+ + N A E Sbjct: 211 DPGQREAREAQARLPAVIN--ARNE 233 >gi|189425152|ref|YP_001952329.1| hypothetical protein Glov_2093 [Geobacter lovleyi SZ] gi|189421411|gb|ACD95809.1| TPR repeat-containing protein [Geobacter lovleyi SZ] Length = 1714 Score = 38.9 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 3/70 (4%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 E+Y + L +++ + + P A + A G+ ++A S Sbjct: 606 SPEELYSSGAVALNDEDPEYTIRLLTELLKREPAHYEAIN---LLAGAYKKLGQLEKAIS 662 Query: 116 LGEEYITQYP 125 + + +YP Sbjct: 663 MYRAGVRRYP 672 >gi|158517895|ref|NP_001028509.2| tetratricopeptide repeat protein 38 [Mus musculus] gi|172044084|sp|A3KMP2|TTC38_MOUSE RecName: Full=Tetratricopeptide repeat protein 38; Short=TPR repeat protein 38 gi|148672473|gb|EDL04420.1| mCG11996, isoform CRA_a [Mus musculus] gi|161899631|gb|AAI32622.2| Tetratricopeptide repeat domain 38 [Mus musculus] gi|161899632|gb|AAI32624.2| Tetratricopeptide repeat domain 38 [Mus musculus] Length = 465 Score = 38.9 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 19/123 (15%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA---- 101 V L + + +++ AV + NF +A + + Q RD P M A Sbjct: 93 VELSQTQTLTPREQLHVSAVEMFAKGNFPRACDLWEQILRDHPTD--------MLALKFS 144 Query: 102 -FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYD--QRATKL 157 + G +Q YP + ++ Y+ G+ ++ YD Q+ K Sbjct: 145 HDAYFYLGYQEQMRDSVAR---VYPFWTPDIPLNSYVKGIYSFGLMETNFYDQAQKLAKE 201 Query: 158 MLQ 160 L Sbjct: 202 ALS 204 >gi|116748175|ref|YP_844862.1| N-acetylmuramoyl-L-alanine amidase [Syntrophobacter fumaroxidans MPOB] gi|116697239|gb|ABK16427.1| N-acetylmuramoyl-L-alanine amidase [Syntrophobacter fumaroxidans MPOB] Length = 484 Score = 38.9 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 40/112 (35%), Gaps = 11/112 (9%) Query: 71 QNFSKA---YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 ++ A + + + + ++ L + + Q + E + Q Sbjct: 25 GAYAAADPVERQYQEVLKRY-------RAALSDPETTHRLRELDQCIAGLREVMRQDTRE 77 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 K D +YL+G Y D D+ + + +V+++ +SP A+ Sbjct: 78 KLGDRSHYLLGQCYHARY-DATRDRDDFRSAQENYRSVVQKHHDSPLADDAQ 128 >gi|241205407|ref|YP_002976503.1| FecR protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859297|gb|ACS56964.1| FecR protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 1237 Score = 38.9 bits (90), Expect = 0.68, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 6/86 (6%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G +++ ++ D + + + +L+ KA + S P +S Sbjct: 494 GRMKEAKHEIDTAIALDPSFDIALLARGRYYLQTGERDKALQDLLAASTANPAHS---QS 550 Query: 97 LLMSAFVQYSAGK---YQQAASLGEE 119 LM A Y G QQA + Sbjct: 551 QLMLAAAHYEKGDRIPSQQALDNADR 576 >gi|220922903|ref|YP_002498205.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium nodulans ORS 2060] gi|219947510|gb|ACL57902.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium nodulans ORS 2060] Length = 784 Score = 38.9 bits (90), Expect = 0.68, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 37/90 (41%), Gaps = 12/90 (13%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAA 114 + Y + F + + +A ++Q R P + + L Y G+Y +A Sbjct: 26 ATDYYNRGDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGL-----AFYRKGEYDRAI 80 Query: 115 SLGEEYITQYPESKNVDYVYYL-VGMSYAQ 143 + ++ + P+ N+ Y+ G+++ + Sbjct: 81 ADYDQALRLDPKYANI----YINRGLAFYR 106 >gi|156973903|ref|YP_001444810.1| hypothetical protein VIBHAR_01613 [Vibrio harveyi ATCC BAA-1116] gi|156525497|gb|ABU70583.1| hypothetical protein VIBHAR_01613 [Vibrio harveyi ATCC BAA-1116] Length = 188 Score = 38.9 bits (90), Expect = 0.68, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 15/130 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + + Y +S Y A +G+ Y Sbjct: 74 YQDAVDLILKKRDYTGAIAAFQQFQKDYPDSTYS--------------ANSHYWLGQLYF 119 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A+ F V+ +Y D+ +A+ +L + A++ + + YP Sbjct: 120 AKKQDKEAVKSFAAVV-SYKDSNKRADALVKLGDIAERNKNDAHAKKYYQQVVDEYPGSA 178 Query: 262 WARYVETLVK 271 A+ + +K Sbjct: 179 SAKVAGSKLK 188 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 23/124 (18%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A + +++ YP+S +Y +G Y +D K ++ + + Sbjct: 83 KKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKKQD--------KEAVKSFAAV 134 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V Y +S A + + + +YY Q V+ Y + Sbjct: 135 VS-YKDSNKRADALVKLGDIAER-NKNDAHAKKYY-------------QQVVDEYPGSAS 179 Query: 226 AEEA 229 A+ A Sbjct: 180 AKVA 183 >gi|158520926|ref|YP_001528796.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] gi|158509752|gb|ABW66719.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] Length = 303 Score = 38.9 bits (90), Expect = 0.68, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 9/85 (10%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +YEKAV + +A E N P + +++ +Y +A + Sbjct: 192 LYEKAVQMRQTGRTKEAIEALNTVIAGNPTYLAYFERAM-----AYMEQDRYHEAIADFN 246 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQ 143 + + P+ + + GM+Y + Sbjct: 247 QTLKVEPKMRG---ALFGRGMAYLK 268 >gi|126179259|ref|YP_001047224.1| TPR repeat-containing protein [Methanoculleus marisnigri JR1] gi|125862053|gb|ABN57242.1| Tetratricopeptide TPR_2 repeat protein [Methanoculleus marisnigri JR1] Length = 1069 Score = 38.9 bits (90), Expect = 0.68, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 21/70 (30%), Gaps = 3/70 (4%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 +Y K L +++A E F P A S G+ Sbjct: 483 QGAGGAEPHLLYRKGAALLHIGRYTEAVEAFEALLNVNPADAAAENSRGE---ALVHLGR 539 Query: 110 YQQAASLGEE 119 Y++A + + Sbjct: 540 YEEALACYDR 549 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 38/121 (31%), Gaps = 22/121 (18%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + +I+ S + L+ IG YL +G+Y A+ Sbjct: 164 GDFREAAACFEKILRTNPGS-------------TDLLSR----IGAAYLNQGDYSKAVGL 206 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY--WARYVETLV 270 F VL +A+ A L L EA + + I P+ W L+ Sbjct: 207 FDRVLD---TEPQNIDALYGKARALEHLGLFQEAADCGAGIVALEPENIPAWYHRGSMLL 263 Query: 271 K 271 + Sbjct: 264 R 264 >gi|77164418|ref|YP_342943.1| tfp pilus assembly protein PilF [Nitrosococcus oceani ATCC 19707] gi|76882732|gb|ABA57413.1| tfp pilus assembly protein PilF [Nitrosococcus oceani ATCC 19707] Length = 246 Score = 38.9 bits (90), Expect = 0.68, Method: Composition-based stats. Identities = 31/253 (12%), Positives = 71/253 (28%), Gaps = 30/253 (11%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + A C + SS++ + S+ + + + V + K+ +A + + + Sbjct: 1 MLLGFAGCASI----LSSQEQDIPSIDKEKAAKINVQLGVEYFKQGELEQALKKLERAIQ 56 Query: 86 DFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 P + +LL G+ ++A + I G+ Sbjct: 57 QDPKLPSAYNALALLKQ-----RLGQAEEAEKYFQRAIKL---DPEYSEAQNNYGVFLYN 108 Query: 144 MIRDVPYDQR-----------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 + R +L + ++ + +L Sbjct: 109 QGHYGDAEARFLEAVKNPLYGTPELAYENAGMAAQKQVEFDKAERYYRKALQLEPRLPKS 168 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEAMARLVEAYVALALMDEAREVVS 251 + ++G Y R Q L Y A H +++ + L D Sbjct: 169 LYHMAEISFEKGHYQ----RAQEYLQRYRVGARHTPKSLWLGIRIERELGNEDTVSSYAL 224 Query: 252 LIQERYPQGYWAR 264 L++ +P A+ Sbjct: 225 LLRRNFPDSPEAK 237 >gi|15606285|ref|NP_213664.1| hypothetical protein aq_972 [Aquifex aeolicus VF5] gi|2983491|gb|AAC07070.1| hypothetical protein aq_972 [Aquifex aeolicus VF5] Length = 425 Score = 38.9 bits (90), Expect = 0.68, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 43/115 (37%), Gaps = 20/115 (17%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV---QYSAGKYQQAAS 115 ++Y + KE +A + F + + FP + ++ GKY++A Sbjct: 274 DLYYEGRKLYKEGLKDEALKKFEEAIKLFPNN------QIAMSYASAIYLEHGKYKRALE 327 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + + + +YL G++Y ++ + K ++ ++ +R Sbjct: 328 YAKRVSDL---DPYLLWGWYLQGIAYFKL--------KKYKESIRALNEAKKRIP 371 >gi|330445543|ref|ZP_08309195.1| tol-pal system protein YbgF [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489734|dbj|GAA03692.1| tol-pal system protein YbgF [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 240 Score = 38.9 bits (90), Expect = 0.68, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 10/149 (6%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 + ++ + + YEKAV LK++++ A + F +P + + Sbjct: 101 AEEKKEPASTEAYSSNVSENAAYEKAVNLILKDKDYKGATKAFQSFLTTYPDSVYKPNAS 160 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + ++ + AA+ + SK D +G+ A+ DV Sbjct: 161 YWLGQLFFAQNQLADAATNFKVVADTKDSSKRAD-ALLKLGVI-AERSNDVAT------- 211 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGR 186 Y +V+ Y NS + A+ + + Sbjct: 212 AKTYYQEVVKSYPNSTTAQQAKTALAKLK 240 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 42/130 (32%), Gaps = 23/130 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y+ A + ++T YP+S Y +G + + + Sbjct: 132 KDKDYKGATKAFQSFLTTYPDSVYKPNASYWLGQLFFAQNQLAD--------AATNFKVV 183 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 + +S A + V + + +V + Y Q V+ +Y ++ Sbjct: 184 ADTK-DSSKRADALLKLGVIAER--SNDVATAKTYY------------QEVVKSYPNSTT 228 Query: 226 AEEAMARLVE 235 A++A L + Sbjct: 229 AQQAKTALAK 238 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 44/121 (36%), Gaps = 21/121 (17%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYV---TVGRNQLAAKEVEIGRYYLKRGEYVAA 209 + K + + Y +S Y A +++ +NQLA AA Sbjct: 134 KDYKGATKAFQSFLTTYPDSVYKPNASYWLGQLFFAQNQLAD----------------AA 177 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 F+ V+A+ D+ +A+ +L + A+ + + YP A+ +T Sbjct: 178 TN-FK-VVADTKDSSKRADALLKLGVIAERSNDVATAKTYYQEVVKSYPNSTTAQQAKTA 235 Query: 270 V 270 + Sbjct: 236 L 236 >gi|13540875|ref|NP_110563.1| TPR repeat-containing protein [Thermoplasma volcanium GSS1] Length = 242 Score = 38.9 bits (90), Expect = 0.68, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 62/203 (30%), Gaps = 44/203 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEE 119 E+ + + + KA E F + + + + L YS Y QA E Sbjct: 27 ERGISYFNIGKYDKAVEEFTK-----AISIINDDADLYHNRGMAYYSMKAYDQAIEDFER 81 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I+ P S + Y + V D + L+ + + Sbjct: 82 SISLDPNSSD-----------YHNALGSVYEDMGNYEKALEEFNSAIR------------ 118 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-NYSDAEHAEEAMARLVEAYV 238 + L G Y K GE AI + +Y+D + + EA Sbjct: 119 -----LEDDLPDYYYNRGNVYWKLGEIEKAIQDYSKAADLDYTDQIYV----YKKYEALT 169 Query: 239 ALALMDEA----REVVSLIQERY 257 +L DEA + + ++ Y Sbjct: 170 SLGRYDEALETVDKAIKVVPANY 192 >gi|256811331|ref|YP_003128700.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus fervens AG86] gi|256794531|gb|ACV25200.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus fervens AG86] Length = 575 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 35/103 (33%), Gaps = 10/103 (9%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE-YFNQC-SRDFPFAGVARKSLLMSA 101 + + ++ + +A +L E++ KA E Y A + Sbjct: 5 KKLLNKLISGDSSYYNLISEAERYLNEKDHEKAIECYLQAFKENKGRDVDWA-----NLS 59 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + Y G Y+ A + ++ PE+ YL G ++ Sbjct: 60 YAYYQLGDYKNALEAINKALSFSPENPEF---LYLKGPILYKL 99 >gi|256810018|ref|YP_003127387.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus fervens AG86] gi|256793218|gb|ACV23887.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus fervens AG86] Length = 317 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 74/291 (25%), Gaps = 90/291 (30%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR------- 85 C G ++ + D +Y K ++ + + A +YF Sbjct: 22 CADKGNFDKALEYLEKVQKVDKNNPLVLYIKGIVLKLKGDIEDAVKYFEYLETIEKTSLL 81 Query: 86 --------DFPFAGVA-------RKSLLM---------SAFVQYSAGKYQQAASLGEEYI 121 F + S L A + G+Y +A + +E++ Sbjct: 82 SLGNLICLTFVKGEYEKTLKYIDKLSKLSNSCYLSPFHKALIYMEFGEYDKALEVLDEFL 141 Query: 122 TQYPE-------------------------------SKNVDYVYYLVGMSYAQMIRDVPY 150 YP +N YV+YL G ++ Sbjct: 142 KIYPNLTSILREKAIILENLGRLDEALECANKILKIRRNDAYVWYLKGRILKKL------ 195 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 K L + + + +A E+ Y A+ Sbjct: 196 --GNIKEALDALKIAINL----------NENLIHVYKDIAYLELA-------NNNYEDAL 236 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 L Y + EA L Y L +++A ++ I P+ Sbjct: 237 SHINKYLEKYPN---DVEAKFYLALIYENLNKIEDALKIYDEIINENPENK 284 >gi|148672474|gb|EDL04421.1| mCG11996, isoform CRA_b [Mus musculus] Length = 473 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 19/123 (15%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA---- 101 V L + + +++ AV + NF +A + + Q RD P M A Sbjct: 101 VELSQTQTLTPREQLHVSAVEMFAKGNFPRACDLWEQILRDHPTD--------MLALKFS 152 Query: 102 -FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYD--QRATKL 157 + G +Q YP + ++ Y+ G+ ++ YD Q+ K Sbjct: 153 HDAYFYLGYQEQMRDSVAR---VYPFWTPDIPLNSYVKGIYSFGLMETNFYDQAQKLAKE 209 Query: 158 MLQ 160 L Sbjct: 210 ALS 212 >gi|114666434|ref|XP_001173731.1| PREDICTED: cell division cycle protein 27 homolog isoform 4 [Pan troglodytes] Length = 830 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 592 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 641 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 642 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 697 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 698 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 752 Query: 237 YVALALMDEA 246 Y L A Sbjct: 753 YKKLGQTHLA 762 >gi|330508351|ref|YP_004384779.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6] gi|328929159|gb|AEB68961.1| TPR-repeat protein [Methanosaeta concilii GP-6] Length = 440 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 18/118 (15%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQ 112 + + + + + V + + +A + +++ R P A + K AF GK+ + Sbjct: 22 QTEEDWFYQGVALADQGKYDEAIKAYDEAIRLDPTIAAAWSNKG---VAFA--DQGKHDE 76 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A +E I P + G S A DQ ++ + Sbjct: 77 AIEAYDEAIRLDPTDAA---AWGNKGASLA--------DQGKYDEAIEAYDEAIRLDP 123 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 35/110 (31%), Gaps = 18/110 (16%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 K + + +A E +++ R P A K + A GKY +A +E Sbjct: 166 KGKSLADQGKYDEAIEAYDEAIRLDPANVAAWGNKG-VSLAD----QGKYDEAIEAYDEA 220 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 I P V+ G+S A DQ ++ + Sbjct: 221 IRLDPTDAA---VWGNKGVSLA--------DQGKHDEAIEAYDEAIRLDP 259 Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 18/111 (16%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K V + + +A E +++ R P A K + A GK+ +A +E Sbjct: 199 NKGVSLADQGKYDEAIEAYDEAIRLDPTDAAVWGNKG-VSLAD----QGKHDEAIEAYDE 253 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 I P V+ G+S DQ ++ + Sbjct: 254 AIRLDPTDAA---VWGNKGVSLV--------DQGKYDEAIEAYDEAIRLDP 293 >gi|297831424|ref|XP_002883594.1| peptidylprolyl isomerase [Arabidopsis lyrata subsp. lyrata] gi|297329434|gb|EFH59853.1| peptidylprolyl isomerase [Arabidopsis lyrata subsp. lyrata] Length = 551 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 52/151 (34%), Gaps = 26/151 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ----CSRDFPFA-GVARKSL-------LMSAFVQYSAGK 109 E+ K ++ A + + + D F+ +++ L A + Sbjct: 402 EEGNSKFKAGKYALASKRYEKAVKFIEYDTSFSEEEKKQAKALKVACNLNDAACKLKLKD 461 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+QA L + + ES NV Y +Y +M D+ + K L E Sbjct: 462 YKQAEKLCTKVLEL--ESTNVK-ALYRRAQAYMEMA-DLDLAEFDVKKAL-------EID 510 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 N+ VK + + + KE ++Y Sbjct: 511 PNNREVKLEQRRLKEKMKEFNKKE---AKFY 538 >gi|297531322|ref|YP_003672597.1| hypothetical protein GC56T3_3090 [Geobacillus sp. C56-T3] gi|297254574|gb|ADI28020.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. C56-T3] Length = 490 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 15/100 (15%) Query: 48 LDSVTDVRYQREVY---EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAF 102 LD + ++ ++A L+E+ F++A E +P ++ A Sbjct: 138 LDGSEWTEEEEQLMVLEDRARRLLEEERFAEAIEALEAIVARYPDVWSAHN-----NLAL 192 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNV-----DYVYYLV 137 + +G +A E + + P + + + YYL Sbjct: 193 AYFYSGDVDKAKQKVREVLKRDPGNLHALCNALVFAYYLR 232 >gi|296201739|ref|XP_002748163.1| PREDICTED: cell division cycle protein 27 homolog isoform 1 [Callithrix jacchus] Length = 824 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 22/190 (11%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 586 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 635 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 636 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 691 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 + +N L +Y +A+ + + + + Sbjct: 692 LNKAIIIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 746 Query: 237 YVALALMDEA 246 Y L A Sbjct: 747 YKKLGQTHLA 756 >gi|196234038|ref|ZP_03132873.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] gi|196221887|gb|EDY16422.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] Length = 733 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 25/75 (33%), Gaps = 11/75 (14%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 + ++ G+ ++A + + P VYY +G + + R D Sbjct: 82 NLGYAYHAQGRTEEAIAEFRRALELNPGD---ALVYYNLGNALGECSR---RD-----EA 130 Query: 159 LQYMSRIVERYTNSP 173 + + + N P Sbjct: 131 IAAYEQALRYRPNYP 145 >gi|223889263|ref|ZP_03623851.1| hypothetical protein BBU64B_0217 [Borrelia burgdorferi 64b] gi|223885296|gb|EEF56398.1| hypothetical protein BBU64B_0217 [Borrelia burgdorferi 64b] Length = 1119 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117 + ++ NF ++ EY N F A+K ++ + ++ K +++ Sbjct: 881 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 934 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175 + I P + +Y YL + + + S ++E+ S Y+ Sbjct: 935 NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 983 Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222 A+ Y G A +E +G Y K Y AI F+ + N Sbjct: 984 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 1040 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259 EA L + + A++++ ++ P+ Sbjct: 1041 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1078 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK++N+ A ++ P + + A +G QA S E+ Sbjct: 948 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 1004 Query: 120 YI 121 I Sbjct: 1005 II 1006 >gi|195953408|ref|YP_002121698.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp. Y04AAS1] gi|195933020|gb|ACG57720.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp. Y04AAS1] Length = 548 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 27/201 (13%), Positives = 65/201 (32%), Gaps = 34/201 (16%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ-YPESK 128 ++++ A + + FP L G+ ++A + ++ K Sbjct: 98 DKDYENAKKTLEEALSKFPQDNFFA---LNLITTYIHDGEIKKAEDIINRFLAFKNENGK 154 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + YY+ + Q+ + ++ + + +E N + Sbjct: 155 EI--FYYIRA--------RIELAQQNKEKAIEDLKKAIELKPN----------FDEAVDT 194 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA+ Y + +Y ++ +L D+ + A+ RL + L L +A + Sbjct: 195 LAS-------IYDQESKYQDEEKLYEDILKK--DSSNIS-ALERLGNLFFKLGLSYKASD 244 Query: 249 VVSLIQERYPQGYWARYVETL 269 + + E +Y L Sbjct: 245 IYKKLAELNKNNLNYQYQYAL 265 >gi|324116599|gb|EGC10516.1| cellulose synthase operon protein C [Escherichia coli E1167] Length = 1157 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 76/233 (32%), Gaps = 30/233 (12%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQM----IRDVPYDQ 152 + + AG+ QA +L Q P Y Y YL G + + I +P Q Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDHDRAALAHINSLPRAQ 559 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIGRYY 200 + +V R S V + G+ A ++ + + Sbjct: 560 WN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLADWA 613 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 614 QQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|51244493|ref|YP_064377.1| hypothetical protein DP0641 [Desulfotalea psychrophila LSv54] gi|50875530|emb|CAG35370.1| hypothetical membrane protein (BatE) [Desulfotalea psychrophila LSv54] Length = 241 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 24/69 (34%), Gaps = 3/69 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A F++A + + F+ + L A GK +A + + Sbjct: 24 DEANRHFAAGEFARAISLYENIEKQEGFS---MELLFNQANAYAQLGKTGRAVLYYQRAL 80 Query: 122 TQYPESKNV 130 P + N+ Sbjct: 81 RLDPGNANI 89 >gi|118579511|ref|YP_900761.1| hypothetical protein Ppro_1078 [Pelobacter propionicus DSM 2379] gi|118502221|gb|ABK98703.1| TPR repeat-containing protein [Pelobacter propionicus DSM 2379] Length = 423 Score = 38.9 bits (90), Expect = 0.69, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 76/245 (31%), Gaps = 47/245 (19%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + V L G+ + D L + +L+ + + +A + Sbjct: 1 MINILRFFVLMLVVSLLCGFLSGAGGDERL-------------RRGDEYLQARQWEEAID 47 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + + P +L A +AGK +A S E + ++ V Y +G Sbjct: 48 EYRAALSERP--EW-PAALERLADALMAAGKDGEAISTYERLLRL---DESRGSVRYTLG 101 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN--QLAAKEVE- 195 + + + R K + + ++ + + V R LA KE Sbjct: 102 VLHERGGR--------LKEAESQYRECLRQEPDNDDARRHLADIYVLRGNLTLATKEYRQ 153 Query: 196 -IGR------YYL-------KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 I R +Y K Y AI ++ + A H E L E Y Sbjct: 154 LITRQPANPLFYFRLARVLKKNRRYGEAIKEYRRAIEL---APHNAELRRELAELYCKRG 210 Query: 242 LMDEA 246 + D A Sbjct: 211 MGDGA 215 Score = 35.5 bits (81), Expect = 9.0, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 67/203 (33%), Gaps = 48/203 (23%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES-- 127 N + A + + Q P + A V +Y +A I P + Sbjct: 141 RGNLTLATKEYRQLITRQPANPL---FYFRLARVLKKNRRYGEAIKEYRRAIELAPHNAE 197 Query: 128 --KNVDYVYYLVGMS------YAQMIRDVPYDQRATKLML--------------QYMSRI 165 + + +Y GM Y +++R D + L Q + Sbjct: 198 LRRELAELYCKRGMGDGAIGQYRELLRLDNRD-TEARNSLISLYVKLHRYGALRQLLQEG 256 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 VER+ + P + F + + + R EY AAI ++ LA +D Sbjct: 257 VERFPDDP---DSHFRMGLMHDF--------AR------EYQAAISEYRKALALKND--- 296 Query: 226 AEEAMARLVEAYVALALMDEARE 248 A+ L + Y+ L +A+E Sbjct: 297 HARALKGLGKIYLKLGKTTKAKE 319 >gi|325279868|ref|YP_004252410.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter splanchnicus DSM 20712] gi|324311677|gb|ADY32230.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter splanchnicus DSM 20712] Length = 251 Score = 38.9 bits (90), Expect = 0.70, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 3/71 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A F +E +++A E + + + Y G+ QA E + Sbjct: 27 KQAEEFYREGKYNEAAEIYRKLRA---GGMESAILYYNLGNCYYKLGENTQAILNYERAL 83 Query: 122 TQYPESKNVDY 132 P + Y Sbjct: 84 LLDPSDASARY 94 >gi|237751469|ref|ZP_04581949.1| periplasmic protein [Helicobacter bilis ATCC 43879] gi|229372835|gb|EEO23226.1| periplasmic protein [Helicobacter bilis ATCC 43879] Length = 310 Score = 38.9 bits (90), Expect = 0.71, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 3/98 (3%) Query: 176 KGARFYVTVGRNQ---LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 + A+ Y +Q +A IG Y R EY A+P ++ + S A + + Sbjct: 211 EEAKAYFEYLIDQKFAVAESSYYIGEIYYARKEYNEALPYYKTSASLDSKASYMPILLWH 270 Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 ++ L D R+ + + +P+ R + ++ Sbjct: 271 TAWSFKYLNDSDNYRKFLQTLVALFPESEQGRKAQDIL 308 >gi|153006320|ref|YP_001380645.1| hypothetical protein Anae109_3477 [Anaeromyxobacter sp. Fw109-5] gi|152029893|gb|ABS27661.1| conserved hypothetical protein [Anaeromyxobacter sp. Fw109-5] Length = 399 Score = 38.9 bits (90), Expect = 0.71, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 47/133 (35%), Gaps = 15/133 (11%) Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y +A + + ++P S +D YL G + + D + + + + Sbjct: 85 YAEARAKFDALPVRFPTSIRLDNAAYLAGRCSYER-GTIGGDPLEFQDGALRLDAMQVAF 143 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 SP++ A GR + G+Y AA +FQ LA +A+ A Sbjct: 144 PTSPFIDNAA--------------YFAGRARFQLGDYEAARLQFQRSLAAAPTGPYADNA 189 Query: 230 MARLVEAYVALAL 242 L + L L Sbjct: 190 QYFLGRSDFELGL 202 Score = 38.6 bits (89), Expect = 0.88, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 28/101 (27%), Gaps = 7/101 (6%) Query: 51 VTDVRYQREVYEKAVLFLKEQ-------NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 T +R Y + F + FP + + + Sbjct: 100 PTSIRLDNAAYLAGRCSYERGTIGGDPLEFQDGALRLDAMQVAFPTSPFIDNAAYFAGRA 159 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 ++ G Y+ A + + P D Y +G S ++ Sbjct: 160 RFQLGDYEAARLQFQRSLAAAPTGPYADNAQYFLGRSDFEL 200 >gi|13324588|gb|AAK18797.1|AF305605_1 LMP1 [Borrelia burgdorferi] Length = 1065 Score = 38.9 bits (90), Expect = 0.71, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117 + ++ NF ++ EY N F A+K ++ + ++ K +++ Sbjct: 827 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 880 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175 + I P + +Y YL + + + S ++E+ S Y+ Sbjct: 881 NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 929 Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222 A+ Y G A +E +G Y K Y AI F+ + N Sbjct: 930 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 986 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259 EA L + + A++++ ++ P+ Sbjct: 987 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1024 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK++N+ A ++ P + + A +G QA S E+ Sbjct: 894 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 950 Query: 120 YI 121 I Sbjct: 951 II 952 >gi|332243159|ref|XP_003270750.1| PREDICTED: cell division cycle protein 27 homolog isoform 2 [Nomascus leucogenys] Length = 830 Score = 38.9 bits (90), Expect = 0.71, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 592 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 641 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 642 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 697 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 698 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 752 Query: 237 YVALALMDEA 246 Y L A Sbjct: 753 YKKLGQTHLA 762 >gi|331670362|ref|ZP_08371201.1| cellulose synthase operon protein C [Escherichia coli TA271] gi|331062424|gb|EGI34344.1| cellulose synthase operon protein C [Escherichia coli TA271] Length = 1157 Score = 38.9 bits (90), Expect = 0.71, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 76/233 (32%), Gaps = 30/233 (12%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQM----IRDVPYDQ 152 + + AG+ QA +L Q P Y Y YL G + + I +P Q Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDHDRAALAHINSLPRAQ 559 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIGRYY 200 + +V R S V + G+ A ++ + + Sbjct: 560 WN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLADWA 613 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 614 QQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|302685818|ref|XP_003032589.1| hypothetical protein SCHCODRAFT_75855 [Schizophyllum commune H4-8] gi|300106283|gb|EFI97686.1| hypothetical protein SCHCODRAFT_75855 [Schizophyllum commune H4-8] Length = 240 Score = 38.9 bits (90), Expect = 0.71, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 60/173 (34%), Gaps = 26/173 (15%) Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVAR 94 W ++ Y + R + E+ L L+E + + A + + + R + Sbjct: 52 WATSTTAHSYASDPAEAEAVRCL-EQGTLKLEEGDVNTAKDLYQRSVEIKR-------SP 103 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 +L Y ++ QA + +E I P S + ++ A +I VP Sbjct: 104 SALFNLGVTHYHLKEFDQAIAAWKESIELQPASPDA-----HTNLASAYIISPVPRPD-- 156 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG-RYYLKRGEY 206 L LQ++ P + + A ++E +YY + EY Sbjct: 157 --LALQHLRTASSLSPEDPEIA-----FNLAAVLEATGDLEGALKYYQRSKEY 202 >gi|90580129|ref|ZP_01235937.1| hypothetical protein VAS14_18126 [Vibrio angustum S14] gi|90439014|gb|EAS64197.1| hypothetical protein VAS14_18126 [Vibrio angustum S14] Length = 240 Score = 38.9 bits (90), Expect = 0.71, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 10/146 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 ++ + + YEKAV LKE+++ A + F +P + + Sbjct: 104 KKEATSSEAFSSNTDENAAYEKAVNLILKEKDYKGATKAFQSFLTTYPNSVYKPNASYWL 163 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + ++ + AA+ + SK D +G+ I + D K Sbjct: 164 GQLFFAQNQLADAATNFKVVADTKDSSKRAD-ALLKLGV-----IAERGNDIATAKK--- 214 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGR 186 Y +++ Y NS A+ +T + Sbjct: 215 YYQEVIKAYPNSTSANQAKTALTKLK 240 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 38/130 (29%), Gaps = 23/130 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y+ A + ++T YP S Y +G + + + Sbjct: 132 KEKDYKGATKAFQSFLTTYPNSVYKPNASYWLGQLFFAQNQLAD--------AATNFKVV 183 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 + +S A + V + ++ + Y Q V+ Y ++ Sbjct: 184 ADTK-DSSKRADALLKLGVIAER--GNDIATAKKYY------------QEVIKAYPNSTS 228 Query: 226 AEEAMARLVE 235 A +A L + Sbjct: 229 ANQAKTALTK 238 >gi|78188464|ref|YP_378802.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3] gi|78170663|gb|ABB27759.1| TPR repeat [Chlorobium chlorochromatii CaD3] Length = 965 Score = 38.9 bits (90), Expect = 0.71, Method: Composition-based stats. Identities = 25/205 (12%), Positives = 62/205 (30%), Gaps = 46/205 (22%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE++ + +A + + L+ Y +Y+++ + + Sbjct: 722 YEESEAA-----YRQAI----ALDEKYAY-PWFNLGQLL----HYKLERYEESEAAYRQA 767 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I +N Y + +G + + + A + + + V Y Sbjct: 768 IAI---DENNAYPWNNLGQLLHEWLGRYEEAETAYRQAIALDEKYV-------YPVTNLA 817 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + RN+ A Y + + VL + D + ++A++ L Sbjct: 818 RLLAQRNRKAE-----AETYYR-----------EAVLKDTQDTQQ------LFLQAHLFL 855 Query: 241 ALMDEAREVVSLIQERYPQGYWARY 265 A + + + E+ G + Sbjct: 856 GNRQLAMDALQALAEKAQNGNQYAF 880 >gi|67078436|ref|NP_001019964.1| cell division cycle protein 27 homolog [Rattus norvegicus] gi|81908662|sp|Q4V8A2|CDC27_RAT RecName: Full=Cell division cycle protein 27 homolog gi|66910648|gb|AAH97475.1| Cell division cycle 27 homolog (S. cerevisiae) [Rattus norvegicus] Length = 824 Score = 38.9 bits (90), Expect = 0.71, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 586 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 635 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 636 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 691 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 692 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 746 Query: 237 YVALALMDEA 246 Y L A Sbjct: 747 YKKLGQTHLA 756 >gi|312213071|emb|CBX93153.1| hypothetical protein [Leptosphaeria maculans] Length = 890 Score = 38.9 bits (90), Expect = 0.72, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 47/140 (33%), Gaps = 22/140 (15%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSA 107 +D + Y ++ +Q + KAYE + Q P + Y Sbjct: 294 ASDQTDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQI 347 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y+ A I P N+ V+Y +G + + + D L R + Sbjct: 348 NQYRDALDAYSRAIRLNP---NISEVWYDLG-TLYESCNNQTAD------ALDAYQRAAD 397 Query: 168 RYTNSPYVKGARFYVTVGRN 187 ++ ++ + + + +N Sbjct: 398 LDPSNVHI---KARLQLLQN 414 >gi|237803113|ref|YP_002888307.1| tetratricopeptide repeat protein [Chlamydia trachomatis B/Jali20/OT] gi|231274347|emb|CAX11142.1| tetratricopeptide repeat protein [Chlamydia trachomatis B/Jali20/OT] Length = 335 Score = 38.9 bits (90), Expect = 0.72, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 17/148 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + +Y KAV+ ++ A + + P K+ + ++ + + Sbjct: 141 DPWNPQGLYNKAVVLSDMEDEEGAIDLLESTVKRNPL-YW--KAWVKLGYLLSRNKIWDR 197 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A E + P ++ +Y +G+ Y + + T+L L+ + N+ Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQESLLL--NA 244 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYY 200 A FY+ + L E +Y Sbjct: 245 EDA-DAHFYIGLAHMDLKQNEQAYDAFY 271 >gi|21674651|ref|NP_662716.1| TPR domain-containing protein [Chlorobium tepidum TLS] gi|21647855|gb|AAM73058.1| TPR domain protein [Chlorobium tepidum TLS] Length = 165 Score = 38.9 bits (90), Expect = 0.72, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 56/157 (35%), Gaps = 31/157 (19%) Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 L ++ A I P +D Y +G +Y D++ Sbjct: 16 LNLGKEYARQQRFDDAIQAYRRAIKLEPG---LDEAYSALGAAYF--------DKKEFNA 64 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 L +M + V+ + + L ++ ++G Y + Y A+ +Q + Sbjct: 65 ALPWMQKRVDIAPD---------------DSL--RQFDLGNVYFQLNRYNDAVASYQKAI 107 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 N + +EA + Y+ + +DEAR++ +Q Sbjct: 108 DN---SYSFQEAWYSMAVCYIKMGKIDEARKIHKWLQ 141 >gi|113478135|ref|YP_724196.1| sulfotransferase [Trichodesmium erythraeum IMS101] gi|110169183|gb|ABG53723.1| sulfotransferase [Trichodesmium erythraeum IMS101] Length = 887 Score = 38.9 bits (90), Expect = 0.72, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 50/153 (32%), Gaps = 31/153 (20%) Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +A ++ I P + + YY +G + ++ R + + R ++ Sbjct: 366 DEAIYSYQKAIEINPNNY---WFYYSLGKALCKLSR--------YEEAITAYQRGIKIDP 414 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 N Y A + + LKR + AI ++ + D+ + Sbjct: 415 N-LY--------------FAYHNLGVALVELKR--WNQAIVAYRQAIKIKPDSYWSH--- 454 Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 L E ++ L D+A E E P W Sbjct: 455 YNLGEIFLKLQEWDKAVETYRYAIENNPNSPWY 487 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 57/174 (32%), Gaps = 32/174 (18%) Query: 60 VYEKAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 VYEK LKE+ +A + + P +Y++A + + Sbjct: 351 VYEKLGDALKEKGLIDEAIYSYQKAIEINPNNYW---FYYSLGKALCKLSRYEEAITAYQ 407 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 I N+ + Y+ +G++ ++ R + + ++ +S + Sbjct: 408 RGIKI---DPNLYFAYHNLGVALVELKR--------WNQAIVAYRQAIKIKPDSYWS--- 453 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 +G +LK E+ A+ ++ + N ++ + + Sbjct: 454 --------------HYNLGEIFLKLQEWDKAVETYRYAIENNPNSPWYYQYLGI 493 >gi|254511952|ref|ZP_05124019.1| putative transmembrane adenylate cyclase [Rhodobacteraceae bacterium KLH11] gi|221535663|gb|EEE38651.1| putative transmembrane adenylate cyclase [Rhodobacteraceae bacterium KLH11] Length = 445 Score = 38.9 bits (90), Expect = 0.72, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 4/66 (6%) Query: 64 AVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +++ A F + S PF ++ + LM+ + G+ +A L + Sbjct: 339 GAAQFHTGDYAAAIRTFEETISSGGPFGPISA-AYLMA--AHWQNGEQDEAQRLARVFSD 395 Query: 123 QYPESK 128 +P Sbjct: 396 TWPSFP 401 >gi|119953007|ref|YP_945216.1| surface-located membrane protein 1 [Borrelia turicatae 91E135] gi|119861778|gb|AAX17546.1| surface-located membrane protein 1 [Borrelia turicatae 91E135] Length = 785 Score = 38.9 bits (90), Expect = 0.72, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 35/103 (33%), Gaps = 19/103 (18%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 + N+ KA E F + + ++ A + ++A +EYI P + Sbjct: 689 NQGNYQKAIEIFQKAEA-----HSSLEAKYNLATALIAIKDNKRAMEKLKEYIKINPNNP 743 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + +G+ D D + + ++ ++ N Sbjct: 744 E---ALHALGIIEYN---DNGND--------KILKEVINKFPN 772 >gi|116250899|ref|YP_766737.1| adenylate cyclase [Rhizobium leguminosarum bv. viciae 3841] gi|115255547|emb|CAK06624.1| putative adenylate cyclase [Rhizobium leguminosarum bv. viciae 3841] Length = 634 Score = 38.9 bits (90), Expect = 0.72, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 32/76 (42%), Gaps = 9/76 (11%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A+ + + +A E Q P V+ ++LL + + G++++A + +E + Sbjct: 542 QALALFQLGRYEEAVELLLQRVSRNPVTDVS-RALLAACYGH--LGRFEEARATWQEVMR 598 Query: 123 QYPESKNVDYVY-YLV 137 P DY Y Sbjct: 599 VNP-----DYSLEYRR 609 >gi|323497736|ref|ZP_08102751.1| hypothetical protein VISI1226_04300 [Vibrio sinaloensis DSM 21326] gi|323317212|gb|EGA70208.1| hypothetical protein VISI1226_04300 [Vibrio sinaloensis DSM 21326] Length = 386 Score = 38.9 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 7/74 (9%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S ++ + + ++A L+ K + + KA E + Q +R + L A + Y G+ Sbjct: 261 SQSESLTEEQWIQQAYLWQKAKEWDKAIEVWQQLARTD------EQYYLNIAQIHYRQGE 314 Query: 110 YQQAASLGEEYITQ 123 YQ A + E I Sbjct: 315 YQPALAALER-IKL 327 >gi|317026444|ref|XP_001389609.2| TPR domain protein [Aspergillus niger CBS 513.88] Length = 730 Score = 38.9 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 YLK ++ AA+ + VL SD E +E+A+ R +A LA +E+ +V ++ +P Sbjct: 247 YLKTHQFDAALYDLKTVL---SDQESSEKALFRKSQALYHLARFEESCKVHQVLFATFPN 303 Query: 260 GYWAR 264 A+ Sbjct: 304 NTAAK 308 >gi|313226137|emb|CBY21280.1| unnamed protein product [Oikopleura dioica] Length = 477 Score = 38.9 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 38/138 (27%), Gaps = 25/138 (18%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQ 112 E+ +A K +++ +A E +++ + + +S F + Sbjct: 3 PAAEELKNQANDVFKTKDYERALELYSKAIEVDGTSAVLYSNRS-----FAYLKTESFGA 57 Query: 113 AASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + I P+ Y YY + M L+ + + Sbjct: 58 ALEDAGKAIELDPK-----YTKGYYRRASANMAM--------GQFSKALKDYESVFKVKP 104 Query: 171 NSPYVKGARFYVTVGRNQ 188 P R V R Sbjct: 105 KDP---DVRKKVQECRKI 119 >gi|261198507|ref|XP_002625655.1| serine/threonine-protein phosphatase 5 [Ajellomyces dermatitidis SLH14081] gi|239594807|gb|EEQ77388.1| serine/threonine-protein phosphatase 5 [Ajellomyces dermatitidis SLH14081] gi|239610072|gb|EEQ87059.1| serine/threonine-protein phosphatase 5 [Ajellomyces dermatitidis ER-3] gi|327350995|gb|EGE79852.1| serine/threonine protein phosphatase [Ajellomyces dermatitidis ATCC 18188] Length = 478 Score = 38.9 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 48/158 (30%), Gaps = 31/158 (19%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYS 106 + TD + + ++ +A ++++Q + P + ++ + Sbjct: 2 ATTDKEAATALKLQGNKAFASHDWIQALDFYSQAIEQYDQDP-SFFCNRAQV-----HIK 55 Query: 107 AGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y A + + I P Y Y+ ++ ++ + L+ Sbjct: 56 REAYGYAVADATKAIELDPN-----YVKAYWRRAIANTAILNS--------RAALKDFKT 102 Query: 165 IVERYTNSPYVKGARFYVTVG----RNQLAAKEVEIGR 198 +V + N A+ + R K +E+ Sbjct: 103 VVRKAPNDR---DAKLKLAECEKLVRRIEFEKAIEVAD 137 >gi|149054498|gb|EDM06315.1| cell division cycle 27 homolog (S. cerevisiae), isoform CRA_a [Rattus norvegicus] Length = 825 Score = 38.9 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 636 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 637 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 692 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 693 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 747 Query: 237 YVALALMDEA 246 Y L A Sbjct: 748 YKKLGQTHLA 757 >gi|15892235|ref|NP_359949.1| hypothetical protein RC0312 [Rickettsia conorii str. Malish 7] gi|15619372|gb|AAL02850.1| unknown [Rickettsia conorii str. Malish 7] Length = 245 Score = 38.9 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 25/86 (29%), Gaps = 8/86 (9%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A Y K +A + +I YP S + Y+ G + + +D Sbjct: 122 DLALAAYKDNKLTEAKDKFKHFIQNYPNSLLISNAYFWYGECFFKQ-KDYNR------AA 174 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTV 184 + Y+ E + + Sbjct: 175 VNYLKGYKEL-PKGAKSSDGLLKLAL 199 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 15/133 (11%), Positives = 47/133 (35%), Gaps = 12/133 (9%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D+ ++ Y+ A+ K+ ++A + F +++P + + + + Y + Sbjct: 113 DIAPDKQAYDLALAAYKDNKLTEAKDKFKHFIQNYPNSLLISNAYFWYGECFFKQKDYNR 172 Query: 113 AASLG-EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 AA + Y P+ + +S ++ + T+ +++ + + Sbjct: 173 AAVNYLKGYKEL-PKGAKSSDGLLKLALSLGEL--------KKTQEACNMLAKFDKEFPT 223 Query: 172 SPYVKGARFYVTV 184 + A + Sbjct: 224 NR--TAASKKMAE 234 >gi|305665947|ref|YP_003862234.1| TRP domain-containing protein BatE [Maribacter sp. HTCC2170] gi|88710722|gb|EAR02954.1| BatE, TRP domain containing protein [Maribacter sp. HTCC2170] Length = 252 Score = 38.9 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 10/95 (10%), Positives = 30/95 (31%), Gaps = 7/95 (7%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V+L S + ++ KA ++ + + +++ + + + Y Sbjct: 9 VFLFSFLGIAQNDVIFNKATEAYNNGDYQTSIDSYSKILEN---GQHSAELYFNLGNAYY 65 Query: 106 SAGKYQQAASLGEEYITQYPES----KNVDYVYYL 136 + + E+ + P N+ Y + Sbjct: 66 KLNQIAPSIYNYEKALLLSPNDNEIKNNLSYAQNM 100 >gi|146277600|ref|YP_001167759.1| TPR repeat-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145555841|gb|ABP70454.1| Tetratricopeptide TPR_2 repeat protein [Rhodobacter sphaeroides ATCC 17025] Length = 190 Score = 38.9 bits (90), Expect = 0.73, Method: Composition-based stats. Identities = 16/146 (10%), Positives = 42/146 (28%), Gaps = 23/146 (15%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGK 109 + + ++ + + A E+ P FA ++ + AG Sbjct: 65 SGSPSADLLLQRGREAMAAGKSTVAIEHLTALVDHAPDFAEGWNARAT-----AYFRAGM 119 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGM-SYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + + + +T P L G+ + + + + L Sbjct: 120 FGPSMADIGRVLTLNPRHFGA-----LAGLGTMLEQMERPERALEVYRAALAI------- 167 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEV 194 + + V+ A + + A +E+ Sbjct: 168 HPHLEGVEQAVKRLEA---KAAGQEL 190 >gi|332243157|ref|XP_003270749.1| PREDICTED: cell division cycle protein 27 homolog isoform 1 [Nomascus leucogenys] Length = 824 Score = 38.9 bits (90), Expect = 0.74, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 586 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 635 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 636 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 691 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 692 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 746 Query: 237 YVALALMDEA 246 Y L A Sbjct: 747 YKKLGQTHLA 756 >gi|297716052|ref|XP_002834361.1| PREDICTED: cell division cycle protein 27 homolog isoform 2 [Pongo abelii] Length = 830 Score = 38.9 bits (90), Expect = 0.74, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 592 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 641 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 642 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 697 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 698 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 752 Query: 237 YVALALMDEA 246 Y L A Sbjct: 753 YKKLGQTHLA 762 >gi|157427980|ref|NP_001098898.1| cell division cycle protein 27 homolog [Bos taurus] gi|281312186|sp|A7Z061|CDC27_BOVIN RecName: Full=Cell division cycle protein 27 homolog gi|157279359|gb|AAI53260.1| CDC27 protein [Bos taurus] gi|296476257|gb|DAA18372.1| cell division cycle protein 27 [Bos taurus] Length = 825 Score = 38.9 bits (90), Expect = 0.74, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 636 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 637 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 692 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 693 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 747 Query: 237 YVALALMDEA 246 Y L A Sbjct: 748 YKKLGQTHLA 757 >gi|73965112|ref|XP_548047.2| PREDICTED: similar to Cell division cycle protein 27 homolog (CDC27Hs) (H-NUC) isoform 1 [Canis familiaris] gi|301784248|ref|XP_002927536.1| PREDICTED: cell division cycle protein 27 homolog [Ailuropoda melanoleuca] Length = 825 Score = 38.9 bits (90), Expect = 0.74, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 636 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 637 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 692 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 693 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 747 Query: 237 YVALALMDEA 246 Y L A Sbjct: 748 YKKLGQTHLA 757 >gi|327263211|ref|XP_003216414.1| PREDICTED: tetratricopeptide repeat protein 37-like isoform 2 [Anolis carolinensis] Length = 1570 Score = 38.9 bits (90), Expect = 0.74, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 57/150 (38%), Gaps = 7/150 (4%) Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE-VYEKAVLFLK 69 ++EA + Q +K F ++A+ L G + LD V D + + K +L Sbjct: 339 LYEASSLQQHKERACCFKAVALLRLPGSDAADEAINSLDQVLDKNNNPKCIALKGQAYLN 398 Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + +A + + P +A + + +QY Y QA + + I + Sbjct: 399 KGLTGEASKIAQELKVTHP--DLAE-ADYLEGLIQYKEKNYSQAETSFQRAIE---KETE 452 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + ++ +G++Y M + D+ Sbjct: 453 MADFHFCLGLTYWFMSEETRKDKSKALTQF 482 >gi|257458911|ref|ZP_05624032.1| LemA protein [Campylobacter gracilis RM3268] gi|257443708|gb|EEV18830.1| LemA protein [Campylobacter gracilis RM3268] Length = 237 Score = 38.9 bits (90), Expect = 0.74, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 7/71 (9%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q L + +VERY + A +NQL E I + R +Y+A++ Sbjct: 143 QGELSSALSRLMLVVERYPD----LKANQNFADLQNQLEGTENRIA---VARKDYIASVQ 195 Query: 212 RFQLVLANYSD 222 + ++ + Sbjct: 196 EYNKLIRTFPT 206 >gi|224046301|ref|XP_002197252.1| PREDICTED: similar to aspartyl(asparaginyl)beta-hydroxylase; HAAH [Taeniopygia guttata] Length = 704 Score = 38.9 bits (90), Expect = 0.74, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 45/125 (36%), Gaps = 18/125 (14%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR----KSLLMSAFVQYSAG 108 D + E+ + A K+ +A F +P + AR +S A + + Sbjct: 324 DKTIKAEL-DAAEKLRKKGKVEEALRAFEALVNQYPQSPRARYGKAQSEDDLAE-KMRSN 381 Query: 109 K-YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ--RATKLMLQYMSRI 165 + QQA + +E ++ NV + + R+ Q + L + ++ Sbjct: 382 EMLQQAINTYDEVVSL----PNVP-----SDLIKLSLKREADRQQFLGRMRGSLVTLQKL 432 Query: 166 VERYT 170 V+ + Sbjct: 433 VQLFP 437 >gi|224532341|ref|ZP_03672973.1| TPR domain protein [Borrelia valaisiana VS116] gi|224511806|gb|EEF82212.1| TPR domain protein [Borrelia valaisiana VS116] Length = 379 Score = 38.9 bits (90), Expect = 0.74, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 68/212 (32%), Gaps = 36/212 (16%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 K+ N+ KA Y+ +C P +L + Y++A + EEY+ PE+ Sbjct: 70 KKNNYDKAIVYYQKCLVKHPNNNY---ALFGLGDCYRNLDDYKKATDIWEEYLKYDPEN- 125 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180 ++ + + + Q +++E + Y + Sbjct: 126 ----------ITVLTRVASSYRKLKNFQKSKQTYLKVMELMPENDYALVGIGHLYYDFKE 175 Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 Y + L E+ IG Y K E+ I F+ L + A Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLKEFTRGIYFFKKALEI---SPSNFYA 232 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + L + Y EA + I E+ P+ Sbjct: 233 IFGLADCYRGNKEYKEALKYWFDIIEKDPKNN 264 >gi|149723400|ref|XP_001501593.1| PREDICTED: cell division cycle 27 homolog (S. cerevisiae) isoform 1 [Equus caballus] Length = 825 Score = 38.9 bits (90), Expect = 0.74, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 636 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 637 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 692 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 693 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 747 Query: 237 YVALALMDEA 246 Y L A Sbjct: 748 YKKLGQTHLA 757 >gi|167466177|ref|NP_001107563.1| cell division cycle protein 27 homolog isoform 1 [Homo sapiens] gi|119578091|gb|EAW57687.1| cell division cycle 27, isoform CRA_b [Homo sapiens] Length = 830 Score = 38.9 bits (90), Expect = 0.74, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 592 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 641 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 642 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 697 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 698 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 752 Query: 237 YVALALMDEA 246 Y L A Sbjct: 753 YKKLGQTHLA 762 >gi|15079681|gb|AAH11656.1| CDC27 protein [Homo sapiens] gi|123985059|gb|ABM83706.1| cell division cycle 27 [synthetic construct] gi|123998795|gb|ABM87026.1| cell division cycle 27 [synthetic construct] Length = 830 Score = 38.9 bits (90), Expect = 0.74, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 592 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 641 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 642 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 697 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 698 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 752 Query: 237 YVALALMDEA 246 Y L A Sbjct: 753 YKKLGQTHLA 762 >gi|312968146|ref|ZP_07782356.1| cellulose synthase operon protein C [Escherichia coli 2362-75] gi|312286971|gb|EFR14881.1| cellulose synthase operon protein C [Escherichia coli 2362-75] Length = 1026 Score = 38.9 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 79/235 (33%), Gaps = 34/235 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 312 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 368 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 369 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 425 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198 Q + +V R N ++ A G+ A ++ + Sbjct: 426 RAQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 480 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VLA +A+ L E +A AR ++ + Sbjct: 481 WAQQRRDYTAARAAYQNVLAREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 532 >gi|307824180|ref|ZP_07654407.1| Sel1 domain protein repeat-containing protein [Methylobacter tundripaludum SV96] gi|307734964|gb|EFO05814.1| Sel1 domain protein repeat-containing protein [Methylobacter tundripaludum SV96] Length = 779 Score = 38.9 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 47/125 (37%), Gaps = 17/125 (13%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQ--NFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 R+ D + E+ A L +++ + +A + + + P +S ++ A Sbjct: 486 REAVERKSNDAPSRVEL---ARLLIRQGEAKYPEAERWLREVADRHPDN---EQSRVVLA 539 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + + K +A +L E++ YP++ + I+D D A + Sbjct: 540 KLLFKQNKTPEAENLLTEFLKDYPKNS---------AKNILTQIKDNTLDVSAWLDVEAD 590 Query: 162 MSRIV 166 S I+ Sbjct: 591 DSEII 595 >gi|163754734|ref|ZP_02161856.1| Tetratricopeptide repeat family protein [Kordia algicida OT-1] gi|161325675|gb|EDP97002.1| Tetratricopeptide repeat family protein [Kordia algicida OT-1] Length = 323 Score = 38.9 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 59/182 (32%), Gaps = 48/182 (26%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQ------------------------------- 71 S + + +SV+D + Y + V + ++ Sbjct: 133 SDEKHENSVSDKEKALKFYNEGVTYYRKGEYENAVVAYKKAVKKDKKFAFAWDNLGLSYR 192 Query: 72 ---NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 N+ +A + + + + P V L+ Q GKY+ A +++I YPE Sbjct: 193 RLENYRQAIKAYRKSLKLDPKGRVP---LMNLPIAQSYLGKYKDAIKSYQKFIEIYPEDP 249 Query: 129 NVDYVYYLVGMS-YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 YY G+S ++ + NSPY K A+ + + + Sbjct: 250 EG---YY--GISRMYMETKEYEKSLDNVMKSFVMYKTV-----NSPYHKDAQSIIVMLYD 299 Query: 188 QL 189 + Sbjct: 300 IM 301 >gi|126665165|ref|ZP_01736148.1| TPR repeat protein [Marinobacter sp. ELB17] gi|126630535|gb|EBA01150.1| TPR repeat protein [Marinobacter sp. ELB17] Length = 621 Score = 38.9 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 64/208 (30%), Gaps = 37/208 (17%) Query: 76 AYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 A P F ++++ + Y + + + A ++P ++ + Sbjct: 240 ALARLQTLLGKHPTFQP----AIILKGDLLYGSDQKRAALDHLMTNTRRFPGNRKMG-AL 294 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-SPYVKG-ARFYVTVGRNQLAAK 192 Y + + + R+V RY + S + A + + +A K Sbjct: 295 YGRMLVN----------EGELQAAQDEFERLVTRYPDMSEFRLSHALVAIENQQGDIARK 344 Query: 193 EVEI----------GRYYLKR-----GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 E+ YYL R V AI +Q V A + L E Sbjct: 345 ELSFLLNRGQQAAEANYYLGRLADNENHTVQAINYYQAVGEGVYYLPAQARASSLLAET- 403 Query: 238 VALALMDEAREVVSLIQERYPQGYWARY 265 +++A + +++ P A + Sbjct: 404 ---GELEQAVNAIQRLRQTNPGRSEALW 428 >gi|119578092|gb|EAW57688.1| cell division cycle 27, isoform CRA_c [Homo sapiens] Length = 823 Score = 38.9 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 585 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 634 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 635 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 690 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 691 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 745 Query: 237 YVALALMDEA 246 Y L A Sbjct: 746 YKKLGQTHLA 755 >gi|120601940|ref|YP_966340.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio vulgaris DP4] gi|120562169|gb|ABM27913.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio vulgaris DP4] Length = 568 Score = 38.9 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 8/97 (8%) Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 A + V + R LA + + + AA+ R++ V Y + A++A+ Sbjct: 80 APAALYRVALTREGLARRSMNPADF-------KAAVERYEEVARRYPRSALADDALFAAA 132 Query: 235 E-AYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + L AR+++ +P+G A ++ Sbjct: 133 KLCMERLDDASAARKILERQLREFPKGDMADAARAML 169 >gi|66516821|ref|XP_396989.2| PREDICTED: WD and tetratricopeptide repeats protein 1-like [Apis mellifera] Length = 658 Score = 38.9 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 12/158 (7%), Positives = 41/158 (25%), Gaps = 28/158 (17%) Query: 37 GWERQSSRDVYLDSVTDVRYQ--REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--V 92 + + + + E+ +A ++Q ++ A +N+ P A Sbjct: 333 CCIENNEDIDFTNKNIKILPPHVEELKRQANESFEQQKYTLAINLYNKAISYCPTAAVLF 392 Query: 93 ARKSLLMSAFVQYS---AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 A ++ G A + + P ++ + + + Sbjct: 393 ANRAA-----AYMKRTWDGDIYAALKDCQMTLLLDPGHVK---AHFRLARCLFDLHQSA- 443 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGA---RFYVTV 184 + + +++ Y + + + Sbjct: 444 -------EADKIIKDFQQKFP--EYASNSACKALKMDI 472 >gi|116625490|ref|YP_827646.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116228652|gb|ABJ87361.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 701 Score = 38.9 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 56/179 (31%), Gaps = 34/179 (18%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGEEYITQYPESK 128 +++ + + +P + + A + G A + Y Sbjct: 525 KDWDSVIKKGTEIRDMYP--DYVEEHSVYEILATAYLAKGNKAAAVEELQRYEK------ 576 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 +G D + KL+ + + + + A + Sbjct: 577 --------IG----------GRDPESLKLLSKNLEEMGR----TAEAADALNRLNFIYPM 614 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 AA +GR L +G AAI F+ VLA + +A L +AY A ++A+ Sbjct: 615 DAAAHRSLGRLSLVQGNNPAAIREFKAVLAKNPLDQA--QAHYDLAKAYQANKQTEQAK 671 >gi|313676466|ref|YP_004054462.1| hypothetical protein Ftrac_2376 [Marivirga tractuosa DSM 4126] gi|312943164|gb|ADR22354.1| hypothetical protein Ftrac_2376 [Marivirga tractuosa DSM 4126] Length = 627 Score = 38.9 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 3/62 (4%) Query: 133 VYYLVGMSYAQMIRDVPYDQ---RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 V Y G+S ++I DQ QY+ E + N Y + ++ L Sbjct: 258 VQYNKGLSSYEIINPKNPDQHIYTNGVEASQYLKIYKENFPNLEYETDSVQLFITVKDSL 317 Query: 190 AA 191 + Sbjct: 318 SQ 319 >gi|311105517|ref|YP_003978370.1| tetratricopeptide repeat family protein 6 [Achromobacter xylosoxidans A8] gi|310760206|gb|ADP15655.1| tetratricopeptide repeat family protein 6 [Achromobacter xylosoxidans A8] Length = 823 Score = 38.9 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 51/137 (37%), Gaps = 19/137 (13%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-SAFVQYSAGKYQQAASLGEEYIT 122 A + Q + +A + +R+ P R +M A G+Y +A + +++ Sbjct: 107 ARAYRDLQRWPEALAAYQAGARNHPGQSAFRAGEIMTLADA----GRYPEARAAAAQWLK 162 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 ++P + + +SY Q L + N+PYV R Y+ Sbjct: 163 RHPRDVDA-----RLALSYVHAR------QGEPYEALHQADLALAAAPNTPYV--LREYI 209 Query: 183 TVG-RNQLAAKEVEIGR 198 R ++A +E+ R Sbjct: 210 HALQRARMADVALELAR 226 >gi|307154100|ref|YP_003889484.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822] gi|306984328|gb|ADN16209.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822] Length = 214 Score = 38.9 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 49/155 (31%), Gaps = 24/155 (15%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 ++ + + + + +V L +E+ + ++NF++A Sbjct: 6 KMLRQLMPVLLAFSVTALS----------LPAVAGKQPTIQELIKAGTQAATQKNFAEAE 55 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + + +P VA Y GK ++A+ + I YP +Y Sbjct: 56 RIYRRAVELYPDDSVAN---YNLGTALYDQGKLEEASMSFKRAILIYP-----EYA---- 103 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + + V DQ + + ++ + Sbjct: 104 --AAYNNLGSVLSDQGKFEEAILNFEIAIKLDPKN 136 >gi|162451187|ref|YP_001613554.1| hypothetical protein sce2915 [Sorangium cellulosum 'So ce 56'] gi|161161769|emb|CAN93074.1| hypothetical protein sce2915 [Sorangium cellulosum 'So ce 56'] Length = 1289 Score = 38.9 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 53/170 (31%), Gaps = 31/170 (18%) Query: 74 SKAYEYFNQCSRDFP-------------FAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +A +Y+ +P G + L A+ A + + A + E Sbjct: 193 KQAIKYYTDLKTQYPKYCQSTNAADPAKSTGCTDEVLYYLAYEYEQAQQLEDARKVYFEL 252 Query: 121 ITQYPESKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I +P SK + Y +++ ++ + D L Q ++ + Y Sbjct: 253 IKNWPNSKYIPNAY----LAFGELFFNEAQGDPSKWDLAEQSYVKV------TQYPPPEN 302 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 +L G Y +G++ AI F+ + + A Sbjct: 303 KVWGYAHYKL-------GYVYWNKGDFARAISEFKKTIEYGQQFQQMPNA 345 >gi|157154865|ref|YP_001465000.1| cellulose synthase subunit BcsC [Escherichia coli E24377A] gi|157076895|gb|ABV16603.1| cellulose synthase operon protein C [Escherichia coli E24377A] Length = 1140 Score = 38.9 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 76/233 (32%), Gaps = 30/233 (12%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 426 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 482 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQM----IRDVPYDQ 152 + + AG+ QA +L Q P Y Y YL G + + I +P Q Sbjct: 483 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDHDRAALAHINSLPRAQ 542 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIGRYY 200 + +V R S V + G+ A ++ + + Sbjct: 543 WN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLADWA 596 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 597 QQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 646 Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 339 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 395 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 396 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 441 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 442 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 490 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 491 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 520 >gi|39996877|ref|NP_952828.1| type II secretion system protein [Geobacter sulfurreducens PCA] gi|39983765|gb|AAR35155.1| type II secretion system protein, putative [Geobacter sulfurreducens PCA] gi|298505890|gb|ADI84613.1| type II secretion system secretin lipoprotein PulQ [Geobacter sulfurreducens KN400] Length = 822 Score = 38.9 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 58/201 (28%), Gaps = 48/201 (23%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + A ++ + FL G + + KA +E +A Sbjct: 1 MRTIANMAIAAVVLTFLAGCTAGLT----------------AFNKAEKLEEEGKLDEAVM 44 Query: 79 YFNQCSRDFP-FAGVAR---KSLLMSAFVQYSAGK-------YQQAASLGEEYITQYP-- 125 F + + P K+ +AF G +A + ++ P Sbjct: 45 KFAEAASTNPQQTEYRMRLLKASEKAAFEHLKNGDTAYEQQLLDEALREYQSAVSLNPAL 104 Query: 126 -----ESKNVDYV-----YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 S + V YY G+ + + + + LQ + ++ + + Sbjct: 105 ARAKQRSDELIRVRNSLTYYREGLEFEKSNK--------PREALQAYRKALDLNPGNKEI 156 Query: 176 KGARFYVTVGRN-QLAAKEVE 195 K A + R +L E+ Sbjct: 157 KEALEKLLQTRRTKLEGFELN 177 >gi|282880108|ref|ZP_06288828.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1] gi|281305981|gb|EFA98021.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1] Length = 1123 Score = 38.9 bits (90), Expect = 0.76, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 20/50 (40%) Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + ++ Y EH + A L Y L A V ++ ++P+ W Sbjct: 618 LRRLVEQYPTYEHMDLAYYHLFLLYSRLHQPTLANGYVQRLKTQFPKSEW 667 >gi|296109060|ref|YP_003616009.1| TPR repeat-containing protein [Methanocaldococcus infernus ME] gi|295433874|gb|ADG13045.1| TPR repeat-containing protein [Methanocaldococcus infernus ME] Length = 535 Score = 38.9 bits (90), Expect = 0.76, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 6/81 (7%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A +L + + KA E + + V+ + AF Y+ Y A ++ + Sbjct: 20 AEEYLDKGEYKKAVELYLKILERDGHLKVSDLA--NLAFAYYNLEDYNLALEFIDKALKI 77 Query: 124 YPESKNVDYVYYLVGMSYAQM 144 Y+ G++ ++ Sbjct: 78 ----SERPEFKYIKGITLYKL 94 >gi|224538028|ref|ZP_03678567.1| hypothetical protein BACCELL_02917 [Bacteroides cellulosilyticus DSM 14838] gi|224520375|gb|EEF89480.1| hypothetical protein BACCELL_02917 [Bacteroides cellulosilyticus DSM 14838] Length = 991 Score = 38.9 bits (90), Expect = 0.76, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 65/172 (37%), Gaps = 12/172 (6%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +Q+A ++ E I Q+P+ D YY + ++ + Y ++ +Y + + Sbjct: 614 RMHDFQRAEAMFERLIRQFPDFAQADEAYYQLFLTELA----IEYYEKKGSSAEKYKAEL 669 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKE----VEIGRY-YLKRGEYVAAIPRFQLVLAN- 219 + R+ S Y K N + K+ + + Y + + G+ A + + + + Sbjct: 670 IARFPESRYAKTLADP-DFAENAVHGKQREDSLYVRAYEHFQMGD-TATVRAAEHLSSEI 727 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Y +H + M + + + + ++YPQ ++K Sbjct: 728 YPLGQHRPKFMFLEAVTRLQGGETERFLATLKELVQQYPQNEITDLAAHILK 779 Score = 38.6 bits (89), Expect = 0.90, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 45/144 (31%), Gaps = 35/144 (24%) Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 Y GM + + D R++ ++ + A + + + Sbjct: 603 ALYGAGMVFKDRMHDFQR-------AEAMFERLIRQFPDFAQADEAYYQLFLT------- 648 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA------------------EEAMARLV 234 E+ I YY K+G +A ++A + ++ +A E+++ Sbjct: 649 ELAI-EYYEKKGS--SAEKYKAELIARFPESRYAKTLADPDFAENAVHGKQREDSLYVRA 705 Query: 235 EAYVALALMDEAREVVSLIQERYP 258 + + R L E YP Sbjct: 706 YEHFQMGDTATVRAAEHLSSEIYP 729 >gi|95928344|ref|ZP_01311092.1| TPR repeat [Desulfuromonas acetoxidans DSM 684] gi|95135615|gb|EAT17266.1| TPR repeat [Desulfuromonas acetoxidans DSM 684] Length = 581 Score = 38.9 bits (90), Expect = 0.76, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 19/113 (16%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY----EKAVLFLKEQNFSKAYEYFN 81 + +A F GW V+L +E++ ++ ++Q+++ A E F+ Sbjct: 316 LAVLVAAGFRRGWLLMLCLLVWLPQPAHALQWKELWRNDNQRGQQAFEQQDYATAEEQFD 375 Query: 82 ----QCSRDFPFAGVARKSLL----MSAFVQY-------SAGKYQQAASLGEE 119 + S + + L +A Y +G+YQQA + EE Sbjct: 376 DPAWKASALYRQGNFDQAEKLWQDNDTADAWYNRGNALAKSGQYQQAINAYEE 428 >gi|77460971|ref|YP_350478.1| hypothetical protein Pfl01_4750 [Pseudomonas fluorescens Pf0-1] gi|77384974|gb|ABA76487.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 574 Score = 38.9 bits (90), Expect = 0.76, Method: Composition-based stats. Identities = 43/275 (15%), Positives = 86/275 (31%), Gaps = 76/275 (27%) Query: 41 QSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQC---------------- 83 ++ + V E+ Y A++ L+ + + +A Y Sbjct: 270 DDAKVEFSTLVQQYPEDDELRYSLALVCLEAKAWDEAKGYLEDLIARESHVDSAHLNLGR 329 Query: 84 ---SRDFPFA---GVAR--------KSLLMSAFVQYSAGKYQQAAS--LGEEYITQYPES 127 R+ P A+ + L A + + GK +A S E Sbjct: 330 IAEERNDPQGALIEYAQVGPGNDYLPAQLRQADILMNNGKTAEAQSKLAAER-------D 382 Query: 128 KNVDYV--YYLV---GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + DY YL+ +S + + + +++Y + + R Sbjct: 383 EQPDYAIQLYLIEAETLSANNQGD----------KAWKVLQQALQQYPDDLNLLYTRAMQ 432 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVA-AIPRFQLVLANYSDAEHAEEAMARLVEAYV--- 238 RN LA E ++ R +KR A A+ L++ EA A + +A+ Sbjct: 433 AEKRNDLAQMEKDL-RLIIKRDPDNAMALNALGYTLSD--RTTRYAEAKALIEQAHQINP 489 Query: 239 --------------ALALMDEAREVVSLIQERYPQ 259 + +++A + + ER+P Sbjct: 490 EDPAVLDSLGWVNFRMGNLEDAEKYLRQALERFPD 524 >gi|291406321|ref|XP_002719506.1| PREDICTED: cell division cycle protein 27 isoform 1 [Oryctolagus cuniculus] Length = 824 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 586 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 635 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 636 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 691 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 692 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 746 Query: 237 YVALALMDEA 246 Y L A Sbjct: 747 YKKLGQTHLA 756 >gi|288929510|ref|ZP_06423354.1| putative TPR domain protein [Prevotella sp. oral taxon 317 str. F0108] gi|288329015|gb|EFC67602.1| putative TPR domain protein [Prevotella sp. oral taxon 317 str. F0108] Length = 1135 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 18/169 (10%), Positives = 48/169 (28%), Gaps = 12/169 (7%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + YP+ + YY + + Y + V +Y + Sbjct: 609 KLDNLALSEKALRRLTDNYPQFDKMPQAYYHLFLLYMRKGDKVT--------AQRYADML 660 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAK---EVEIGRY-YLKRGEYVAAIPRFQLVLANYS 221 ++Y + Q + Y + K Y A ++ + Sbjct: 661 KQQYPKHELTELITDPYYFANAQRGEHIEDSLYAVTYDFFKAENYAAVKRNAKVSATKFK 720 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + ++ + + + +D + + E++PQ ++ +V Sbjct: 721 HGANRDKFLFVEALSMLHAGNIDACLNGLQTLVEQFPQSELSKMAAMIV 769 >gi|257457649|ref|ZP_05622816.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC 35580] gi|257445035|gb|EEV20111.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC 35580] Length = 715 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 6/75 (8%) Query: 7 RAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66 R F+ W +++F S L+ S VT +Y+ Sbjct: 595 RQKQTFKYWF--MHRFLPVAVMSAIALILIFCISVLSWQFIYKPVT----AESLYKTGYA 648 Query: 67 FLKEQNFSKAYEYFN 81 +L + A E FN Sbjct: 649 YLDNGQYETAIEKFN 663 >gi|170750693|ref|YP_001756953.1| TPR repeat-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170657215|gb|ACB26270.1| TPR repeat-containing protein [Methylobacterium radiotolerans JCM 2831] Length = 306 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 9/68 (13%), Positives = 17/68 (25%), Gaps = 9/68 (13%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A + + A F R + AG A + +E + Sbjct: 74 RAAALYEAGRYGDAIALFRAGGRR---------ASYNLGNALAKAGDLDGALAAYDEALR 124 Query: 123 QYPESKNV 130 P + Sbjct: 125 FNPRDADA 132 >gi|13324594|gb|AAK18800.1|AF305608_1 LMP1 [Borrelia burgdorferi] Length = 1065 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117 + ++ NF ++ EY N F A+K ++ + ++ K +++ Sbjct: 827 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 880 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175 + I P + +Y YL + + + S ++E+ S Y+ Sbjct: 881 NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 929 Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222 A+ Y G A +E +G Y K Y AI F+ + N Sbjct: 930 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 986 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259 EA L + + A++++ ++ P+ Sbjct: 987 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1024 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK++N+ A ++ P + + A +G QA S E+ Sbjct: 894 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 950 Query: 120 YI 121 I Sbjct: 951 II 952 >gi|167466175|ref|NP_001247.3| cell division cycle protein 27 homolog isoform 2 [Homo sapiens] gi|12644198|sp|P30260|CDC27_HUMAN RecName: Full=Cell division cycle protein 27 homolog; AltName: Full=Anaphase-promoting complex subunit 3; Short=APC3; AltName: Full=CDC27 homolog; Short=CDC27Hs; AltName: Full=H-NUC gi|998472|gb|AAB34378.1| H-NUC [Homo sapiens] gi|40786801|gb|AAR89911.1| cell division cycle 27 [Homo sapiens] gi|119578093|gb|EAW57689.1| cell division cycle 27, isoform CRA_d [Homo sapiens] gi|168275840|dbj|BAG10640.1| cell division cycle protein 27 homolog [synthetic construct] Length = 824 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 586 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 635 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 636 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 691 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 692 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 746 Query: 237 YVALALMDEA 246 Y L A Sbjct: 747 YKKLGQTHLA 756 >gi|330834799|ref|YP_004409527.1| hypothetical protein Mcup_0938 [Metallosphaera cuprina Ar-4] gi|329566938|gb|AEB95043.1| conserved hypothetical protein [Metallosphaera cuprina Ar-4] Length = 668 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 39/128 (30%), Gaps = 14/128 (10%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + + Y K + F +A E N + P R ++ Sbjct: 476 KSYDEKIRENPNNPEYYYAKGKVLSNLNRFEEALEELNNAIKLNPNNPEYRFGK---GYL 532 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y +Y++A I P KN Y YY G++Y + R ++ + Sbjct: 533 LYELYRYEEALEELNNAIKLNP--KNSKYHYY-KGLTYYYLDRPDD--------SIKEFN 581 Query: 164 RIVERYTN 171 + + Sbjct: 582 NAINLNPD 589 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 82/260 (31%), Gaps = 27/260 (10%) Query: 7 RAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66 R + +L + + +V ++ ERQ + D + T + Y+K+ Sbjct: 187 RRFGLKPLEYEKLKSAISSSDSNASVKGVIFPERQRNNDNVSNIETVWNSAEDYYKKSKE 246 Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 +A + ++ R P+ + + + Y + + A + I Q P Sbjct: 247 LFDNGKHDEALKEIDKAMRLDPYKP---EYHFLKGLILYDVHENEDAIEAFYKAIRQNPN 303 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + Y YY G + ++ + R+ ++ Sbjct: 304 NPE--Y-YYFKGKALYEVKKY-----EDALEAFDNAIRLNDKRPE-----------YYFF 344 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 A E++ RY + A+ + + + D A EA L ++A Sbjct: 345 KGEALYELK--RYNDAYKVLIKAVEKLEEEIKRKPDNPFYYWA---KGEALYELKRYNDA 399 Query: 247 REVVSLIQERYPQGYWARYV 266 EV++ P R++ Sbjct: 400 IEVLNRAISLNPDNSEYRFL 419 >gi|297716050|ref|XP_002834360.1| PREDICTED: cell division cycle protein 27 homolog isoform 1 [Pongo abelii] Length = 824 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 586 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 635 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 636 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 691 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 692 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 746 Query: 237 YVALALMDEA 246 Y L A Sbjct: 747 YKKLGQTHLA 756 >gi|296127389|ref|YP_003634641.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] gi|296019205|gb|ADG72442.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] Length = 425 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 44/142 (30%), Gaps = 14/142 (9%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G ++ D + Y Y +A+ A + ++ + F Sbjct: 287 LGLYEEAISDFDTALNIEPSYIDAYYNRALAKNNLGLHEYAVKDYDIVTE---FDNNNID 343 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + A Y+ Y++A ++ I P+S + Y G + M Sbjct: 344 AYYNKALSYYNLSDYKEALKNYDKVIELNPQSAD---AYNNRGFTKYCM--------GLY 392 Query: 156 KLMLQYMSRIVERYTNSPYVKG 177 + L+ + +E + K Sbjct: 393 QEALKDYDKAIEINPDYERAKQ 414 >gi|225548523|ref|ZP_03769571.1| tetratricopeptide repeat domain protein [Borrelia burgdorferi 94a] gi|225370786|gb|EEH00221.1| tetratricopeptide repeat domain protein [Borrelia burgdorferi 94a] Length = 1065 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117 + ++ NF ++ EY N F A+K ++ + ++ K +++ Sbjct: 827 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 880 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175 + I P + +Y YL + + + S ++E+ S Y+ Sbjct: 881 NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 929 Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222 A+ Y G A +E +G Y K Y AI F+ + N Sbjct: 930 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 986 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259 EA L + + A++++ ++ P+ Sbjct: 987 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1024 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK++N+ A ++ P + + A +G QA S E+ Sbjct: 894 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 950 Query: 120 YI 121 I Sbjct: 951 II 952 >gi|144897512|emb|CAM74376.1| TPR repeat [Magnetospirillum gryphiswaldense MSR-1] Length = 731 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 50/156 (32%), Gaps = 21/156 (13%) Query: 50 SVTDVRYQREVYEKAVLFLKEQN----FSKAYEYFNQCS-----RDFPFAGVARKSLLMS 100 + R R +A + L+ + +A + DF + + R S LM Sbjct: 371 EDSASRPDRAYAARARIELQLKRGLISAGEAIAQLEKLRFAWRGEDFEYQLLKRLSELMV 430 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS--YAQMIRDVPYDQRATKLM 158 A +Y A L ++ +PE +V V MS + ++ D + Sbjct: 431 ADA-----RYADALRLMRTVVSNFPEHPDVPNVQ--QAMSDTFEKLFLGGLADNLSAFAA 483 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 + + + + ++LA ++ Sbjct: 484 IGLFDEFQDLTPS---GTKGDEMIRKLADRLAQVDL 516 >gi|114666430|ref|XP_511624.2| PREDICTED: cell division cycle protein 27 homolog isoform 5 [Pan troglodytes] Length = 824 Score = 38.9 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 586 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 635 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 636 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 691 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 692 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 746 Query: 237 YVALALMDEA 246 Y L A Sbjct: 747 YKKLGQTHLA 756 >gi|302812259|ref|XP_002987817.1| hypothetical protein SELMODRAFT_447134 [Selaginella moellendorffii] gi|300144436|gb|EFJ11120.1| hypothetical protein SELMODRAFT_447134 [Selaginella moellendorffii] Length = 667 Score = 38.9 bits (90), Expect = 0.78, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 59/197 (29%), Gaps = 45/197 (22%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSA--GKYQQAAS--- 115 + + + + F +A F++ R P + + ++L Q+S Y +A Sbjct: 243 RGQVRVDAKRFEEAVADFDEAIRRQPGNYRAYSGRALAFEGLAQWSNAVADYTEALQRGR 302 Query: 116 LGEEYITQYPESKNVDYVYYLVG--MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 Y YV G ++ ++ D A+ Q + + Sbjct: 303 AATGYRD--------PYVMNSRGNALASLGRYKEALRDYSASFDAFQDARELD----GAI 350 Query: 174 YVK--GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 Y K A + VG KE+ +A R + A+ Sbjct: 351 YAKANAALMRIQVGDEANGLKEL------------LAVARRA-------PGSIDMRAAL- 390 Query: 232 RLVEAYVALALMDEARE 248 Y ++ +EA + Sbjct: 391 --AAVYWSMGRANEAED 405 >gi|281350105|gb|EFB25689.1| hypothetical protein PANDA_017323 [Ailuropoda melanoleuca] Length = 790 Score = 38.9 bits (90), Expect = 0.78, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 579 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 628 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 629 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 684 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 685 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 739 Query: 237 YVALALMDEA 246 Y L A Sbjct: 740 YKKLGQTHLA 749 >gi|195952740|ref|YP_002121030.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp. Y04AAS1] gi|195932352|gb|ACG57052.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp. Y04AAS1] Length = 149 Score = 38.9 bits (90), Expect = 0.78, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 26/69 (37%), Gaps = 3/69 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ KE+ + A +Y+ + P ++ A+ Y G + +A + Sbjct: 65 YFDLGNALFKEKKYKDAIKYYEKAIEINP---KNEDAMNNLAYTYYKLGDFTKAKFYVLK 121 Query: 120 YITQYPESK 128 + P +K Sbjct: 122 ALKLEPTNK 130 >gi|170743313|ref|YP_001771968.1| TPR repeat-containing protein [Methylobacterium sp. 4-46] gi|168197587|gb|ACA19534.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium sp. 4-46] Length = 200 Score = 38.9 bits (90), Expect = 0.78, Method: Composition-based stats. Identities = 18/133 (13%), Positives = 36/133 (27%), Gaps = 25/133 (18%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLG 117 + +A LK+++ + A E ++ P G +R++ Y A + Sbjct: 83 LASRAGQALKDKDAALAVELLDRVVTLEPGWAEGWSRRAT-----AFYLLDDQASALADL 137 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P +++ M D + L R Y Sbjct: 138 HRALQLEPRHFEA-----WSALAHLYMASD------DKERALAAFRRAEAIYPR------ 180 Query: 178 ARFYVTVGRNQLA 190 + LA Sbjct: 181 -MGKLREAIEHLA 192 >gi|126668391|ref|ZP_01739348.1| hypothetical protein MELB17_14658 [Marinobacter sp. ELB17] gi|126627100|gb|EAZ97740.1| hypothetical protein MELB17_14658 [Marinobacter sp. ELB17] Length = 258 Score = 38.9 bits (90), Expect = 0.78, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 14/129 (10%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 I D+ +Q+ + + ++ Y A +++ G YL Sbjct: 137 YNSIVDLIRNQKKYDQAITQIYEFLDTYPEGDLTVNAYYWL--------------GEVYL 182 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A F +V ++D A ++ +L L +EA + + + YP Sbjct: 183 VKPQLEQAKQAFSIVATRFADHRKAADSTYKLGVTLDRLGEKEEAGRRMQTVVKNYPDSS 242 Query: 262 WARYVETLV 270 A+ ++ + Sbjct: 243 AAKLAQSYL 251 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 54/186 (29%), Gaps = 60/186 (32%) Query: 49 DSVTDVRYQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 D + + Y V + ++ + +A + Sbjct: 125 DYRQPSAEESKAYNSIVDLIRNQKKYDQAITQ---------------------IY----- 158 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 E++ YPE YY +G Y + + Q S + Sbjct: 159 -----------EFLDTYPEGDLTVNAYYWLGEVYLVKPQ--------LEQAKQAFSIVAT 199 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 R+ + + + + V ++L KE A R Q V+ NY D+ A+ Sbjct: 200 RFADHRKAADSTYKLGVTLDRLGEKE--------------EAGRRMQTVVKNYPDSSAAK 245 Query: 228 EAMARL 233 A + L Sbjct: 246 LAQSYL 251 >gi|13324576|gb|AAK18791.1|AF305599_1 LMP1 [Borrelia burgdorferi] Length = 849 Score = 38.9 bits (90), Expect = 0.78, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117 + ++ NF ++ EY N F A+K ++ + ++ K +++ Sbjct: 611 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 664 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175 + I P + +Y YL + + + S ++E+ S Y+ Sbjct: 665 NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 713 Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222 A+ Y G A +E +G Y K Y AI F+ + N Sbjct: 714 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 770 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259 EA L + + A++++ ++ P+ Sbjct: 771 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 808 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK++N+ A ++ P + + A +G QA S E+ Sbjct: 678 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 734 Query: 120 YI 121 I Sbjct: 735 II 736 >gi|327263209|ref|XP_003216413.1| PREDICTED: tetratricopeptide repeat protein 37-like isoform 1 [Anolis carolinensis] Length = 1566 Score = 38.9 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 57/150 (38%), Gaps = 7/150 (4%) Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE-VYEKAVLFLK 69 ++EA + Q +K F ++A+ L G + LD V D + + K +L Sbjct: 339 LYEASSLQQHKERACCFKAVALLRLPGSDAADEAINSLDQVLDKNNNPKCIALKGQAYLN 398 Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + +A + + P +A + + +QY Y QA + + I + Sbjct: 399 KGLTGEASKIAQELKVTHP--DLAE-ADYLEGLIQYKEKNYSQAETSFQRAIE---KETE 452 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + ++ +G++Y M + D+ Sbjct: 453 MADFHFCLGLTYWFMSEETRKDKSKALTQF 482 >gi|297482483|ref|XP_002692844.1| PREDICTED: sperm associated antigen 1 [Bos taurus] gi|296480492|gb|DAA22607.1| sperm associated antigen 1 [Bos taurus] Length = 974 Score = 38.9 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 12/117 (10%), Positives = 36/117 (30%), Gaps = 17/117 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 EK K ++ +A +Y+ + P A ++ + A E+ Sbjct: 215 EKGNEAFKSGDYEEAVKYYTRSLSVLPTVAAYNNRAQAEL-----KLQNWNSAFQDCEKV 269 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P + +Y + + ++ +++++ ++ K Sbjct: 270 LELEPGNLK---ALLRRATTYKHQNK--------LQEAIEDLNKVLAVEPDNELAKK 315 >gi|296132604|ref|YP_003639851.1| TPR repeat-containing protein [Thermincola sp. JR] gi|296031182|gb|ADG81950.1| TPR repeat-containing protein [Thermincola potens JR] Length = 196 Score = 38.9 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 65/218 (29%), Gaps = 33/218 (15%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAY 77 ++ ++ FF + C + + D Y + Y + +++ + A Sbjct: 9 IFLISVICFFLLTGC-WTKTQGEKRIDYYKGLIEQEPNNPVHYTNLGRVLFEQKKYEDAI 67 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 F + P A A V ++ ++Q++ + ++ + P + Sbjct: 68 TCFKAALKINPNDSTAH---YNLALVYFAREEWQKSRAELDKILKAQPNHTL---ALLQL 121 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 G + + Q + + S A + G Sbjct: 122 GEVNLKS--------ENYEEARQTFKKCWKLEPTS---ASALKGL--------------G 156 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 Y+ +Y A ++L L D EA+ RL E Sbjct: 157 DSYVGLKQYEKAKAAYKLALRYVPDYGEVREALRRLEE 194 >gi|289662889|ref|ZP_06484470.1| hypothetical protein XcampvN_07338 [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 251 Score = 38.9 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 19/130 (14%) Query: 64 AVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A L + ++++A E++ + +L A Q+ G+ QQA + I Sbjct: 95 AETLLAQGDYAQAAEHYQGALRGLY---RDDPHLMLGLAKAQFGLGQPQQARQTLDALIA 151 Query: 123 QYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P ++ D ++ Y + D T+ L + + Y + AR Sbjct: 152 ANPSFRSHDGHLLYARAV----------EDSGDTEAALHEYETLAQGYP----GEEARVR 197 Query: 182 VTVGRNQLAA 191 + A Sbjct: 198 YAQLLQRTAR 207 >gi|215488807|ref|YP_002331238.1| cellulose synthase subunit BcsC [Escherichia coli O127:H6 str. E2348/69] gi|215266879|emb|CAS11320.1| cellulose synthase subunit [Escherichia coli O127:H6 str. E2348/69] Length = 1157 Score = 38.9 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 79/235 (33%), Gaps = 34/235 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198 Q + +V R N ++ A G+ A ++ + Sbjct: 557 RAQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 611 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VLA +A+ L E +A AR ++ + Sbjct: 612 WAQQRRDYTAARAAYQNVLAREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663 >gi|182677316|ref|YP_001831462.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182633199|gb|ACB93973.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 301 Score = 38.9 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 68/221 (30%), Gaps = 41/221 (18%) Query: 49 DSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQY 105 D V+ E Y+ + V + K +S+A F+Q + P ++L Sbjct: 76 DVVSRNPRSSEAYDTRGVAYAKLGKYSEAISDFSQAIKLDPNNAPAYTNRAL-----AYR 130 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + + A + I P YL G + + Q + + Sbjct: 131 QSNRNDAALADFNRAIEVNPRHAPA----YL-GRAN------LLRVQGNLDEAKSDLDQA 179 Query: 166 VERYTNSPYV--------------KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 ++ + A ++ + G YL RG+ + A Sbjct: 180 IKLNPENAQAFHARGLIYQREGNQPQAITDFDNAIDR----DPFAGAPYLARGQSLIATG 235 Query: 212 RFQLVLANYSDAEHA----EEAMARLVEAYVALALMDEARE 248 ++ + +++ A H +A A L AY +A E Sbjct: 236 KYDKAIEDFNAALHVDNKNPDAWAGLGLAYEKSGNRTKAAE 276 >gi|124006312|ref|ZP_01691147.1| TPR repeat [Microscilla marina ATCC 23134] gi|123988236|gb|EAY27894.1| TPR repeat [Microscilla marina ATCC 23134] Length = 403 Score = 38.9 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 6/79 (7%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y + L L+ Q+F A F++ + P K+ L +++ G Y+ A + ++ Sbjct: 303 YYSRGGLRLQAQDFKAALADFDKIIQLKP---KDEKAYLTRGNIKFKLGDYKGALADFDQ 359 Query: 120 YITQYPESKNVDYVYYLVG 138 I P+S+ Y++ G Sbjct: 360 AIKLAPKSRKG---YFMRG 375 >gi|156378172|ref|XP_001631018.1| predicted protein [Nematostella vectensis] gi|156218050|gb|EDO38955.1| predicted protein [Nematostella vectensis] Length = 1771 Score = 38.9 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 8/116 (6%) Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKE---VEIGRYYLKRGEYVAAIPRFQLVLA 218 ++ YT S + A + + + +E GR+++K G+ +A Q L Sbjct: 1596 FFHLITIYTQSEKTELAEKLFHTMTKRFSQSKKVWIEFGRFFMKTGKPDSARKLLQRGLK 1655 Query: 219 NYSDAEHAEEAM-ARLVEAYVALALMDEAREVVSLIQERYPQGY--WARYVETLVK 271 + +H E + L+E + V+ + YP+ W+ Y++ + K Sbjct: 1656 SLPTRKHVETIVQFALME--FKNGDPQRGQTVLESVLSNYPKRTDIWSVYIDMMSK 1709 >gi|73988166|ref|XP_851718.1| PREDICTED: similar to prolyl 4-hydroxylase, alpha III subunit precursor [Canis familiaris] Length = 544 Score = 38.9 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 19/131 (14%) Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70 + + + + A +F +A + D+Y + ++ + Sbjct: 143 LQDVYMLNVKGLARGVFQRVAGSAVT--------DLYSPRRLFSLTADDCFQVGKVAYDM 194 Query: 71 QNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ A + + F + +L AF + AG A SL E++ Sbjct: 195 GDYYHAIPWLEEAVSLFRGSYGDWKTEDEASLEDALDHLAFAYFQAGNVSCALSLSREFL 254 Query: 122 TQY-PESKNVD 131 Y P++K + Sbjct: 255 -LYSPDNKRMA 264 >gi|116623643|ref|YP_825799.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116226805|gb|ABJ85514.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 548 Score = 38.9 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 59/196 (30%), Gaps = 26/196 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + V K N+ KA + + Q + P + +S L Q A + E Sbjct: 271 FNLGVAHHKMGNYDKAAQAYRQAASLQPSSA---QSHLNLGVAQQELNDLAGARASYEHA 327 Query: 121 ITQYPESK----NVDYVYYLVGMSYA--QMIRDVPYDQRATKLM---LQYMSRIVERYTN 171 + P N+ V G ++ + D L Y+ + Y N Sbjct: 328 LNIDPNQSGVLWNLALVLEQQGERQWAEKLYARINEDAPEWGDACFRLGYLRLLRGDYIN 387 Query: 172 SPYVKGA--RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 S A + L G Y + G AA FQ VL D+ A Sbjct: 388 SAEAFEACLAHRLDWPEAHL-----NAGIAYARNGNAPAARKSFQEVLTLRPDSSDAVRG 442 Query: 230 MARLV-------EAYV 238 +A L EAY Sbjct: 443 LAALALEQEEFTEAYD 458 >gi|332297233|ref|YP_004439155.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema brennaborense DSM 12168] gi|332180336|gb|AEE16024.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema brennaborense DSM 12168] Length = 1129 Score = 38.9 bits (90), Expect = 0.80, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 73/206 (35%), Gaps = 31/206 (15%) Query: 65 VLFLKEQNFSKAYE-YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT- 122 + + +F +A + Y + + ++QYS Y +A +I Sbjct: 924 LDYFVSGDFDEALKNYLSAVQTQY----DTPSVRYKIGYIQYSKKNYAEALGS---FIKA 976 Query: 123 --QYPESKNVDYVYYLVGMSYAQMIRDVPY-DQRATKLMLQYMSRIVERY------TNSP 173 Q +V L+ + +R + Q + +LQ + RY N+ Sbjct: 977 SEQNSSDPHV-----LIALGNVLSLRGNNFAAQGYYEKLLQLLDAERSRYGIMFPQVNTE 1031 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 + Y+ A+ + + +Y L + +A+ Q ++ N + + A +A+ R Sbjct: 1032 HADIVDLYLK------ASNNLGVTQYRLAQQTGDSALN-AQAMV-NLTTSLRAWDALTRN 1083 Query: 234 VEAYVALALMDEAREVVSLIQERYPQ 259 E + L + A V+ + P Sbjct: 1084 QETMIRLGGTNLAERNVAYMSHPVPD 1109 >gi|291406323|ref|XP_002719507.1| PREDICTED: cell division cycle protein 27 isoform 2 [Oryctolagus cuniculus] Length = 825 Score = 38.9 bits (90), Expect = 0.80, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 636 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 637 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 692 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 693 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 747 Query: 237 YVALALMDEA 246 Y L A Sbjct: 748 YKKLGQTHLA 757 >gi|192358859|ref|YP_001983972.1| putative adenylate cyclase [Cellvibrio japonicus Ueda107] gi|190685024|gb|ACE82702.1| putative adenylate cyclase [Cellvibrio japonicus Ueda107] Length = 737 Score = 38.9 bits (90), Expect = 0.80, Method: Composition-based stats. Identities = 40/258 (15%), Positives = 91/258 (35%), Gaps = 44/258 (17%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAY 77 + K +++ +A + + ++ +Y+ S+ + YE A + +A Sbjct: 464 IKKDNISVMLVLASVYSDMNDIGNAEKIYVLSIQKDPKNWKAYEHYAYFLTGRGRYDEAI 523 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD---YVY 134 + + + P A A + +++AA+ E+ + N+D Y Y Sbjct: 524 KLYEKIIDFVPDNSFALN---NIAINYFYKMDFKRAAAFFEK-------ASNIDPSGYSY 573 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS----PYVKGARFYVTVGRNQLA 190 G Y + A + S ++ ++ Y+ A +++ G+N+ A Sbjct: 574 ANTGNMYYTL--------GAFDKAAEMYSEALQLEPDNYQYLAYLGDAYKHIS-GKNKQA 624 Query: 191 AKEVE-IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 ++ E + +Y AA+ R + + + L AY + +A E+ Sbjct: 625 SECFERVIKY--------AAVDR--------QNNPRSARSYYYLARAYTYFGNLAKANEL 668 Query: 250 VSLIQERYPQGYWARYVE 267 + + P A Y Sbjct: 669 MDIADGLEPNSTEANYTH 686 >gi|126308599|ref|XP_001376268.1| PREDICTED: similar to H-NUC [Monodelphis domestica] Length = 829 Score = 38.9 bits (90), Expect = 0.80, Method: Composition-based stats. Identities = 22/190 (11%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 591 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 640 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 641 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 696 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 + +N L +Y +A+ + + + + Sbjct: 697 LNKAIIIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 751 Query: 237 YVALALMDEA 246 Y L A Sbjct: 752 YKKLGQTHLA 761 >gi|308812059|ref|XP_003083337.1| FOG: TPR repeat (ISS) [Ostreococcus tauri] gi|116055217|emb|CAL57613.1| FOG: TPR repeat (ISS) [Ostreococcus tauri] Length = 345 Score = 38.9 bits (90), Expect = 0.80, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 42/129 (32%), Gaps = 18/129 (13%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + KE N ++A ++ + P VA L A G++++A + E I Sbjct: 226 DRGNVAFKEGNVAQAAVHYTEALDLDPSHVVA---LCNRAQCFLKLGEHEKALADAERAI 282 Query: 122 TQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 DY ++ G++ + R + R + + K A Sbjct: 283 EV-----KSDYVKAHFRRGLALHALERFTD--------AVHAFERALALDPKNVQAKDAL 329 Query: 180 FYVTVGRNQ 188 + Sbjct: 330 RVAEYAVVR 338 >gi|72547108|ref|XP_843178.1| hypothetical protein [Leishmania major strain Friedlin] gi|323363692|emb|CBZ12697.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 622 Score = 38.9 bits (90), Expect = 0.80, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 12/80 (15%) Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAE-----HAEEAMARLVEAYVALALMDEAREV 249 IGR ++ EY AA F A Y E E++ L Y L +DEA + Sbjct: 53 NIGRVFIDMKEYGAAENAFTEAAAIYEQVEGDKSLEYAESLELLALCYTHLKFLDEAEKA 112 Query: 250 ----VSLIQ---ERYPQGYW 262 + + + Y W Sbjct: 113 FKDSIRIFRDQCYNYGNNSW 132 >gi|282877698|ref|ZP_06286513.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310] gi|281300270|gb|EFA92624.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310] Length = 670 Score = 38.9 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 29/251 (11%), Positives = 74/251 (29%), Gaps = 67/251 (26%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPF 89 AVC + + + V Y KA ++L +++ ++A + ++ + P+ Sbjct: 145 AVCLMNEKKYDEALLQTDTIVQKWANAANAYSLKAEIYLHQKDTTQAAKSLDKSLKIDPY 204 Query: 90 --AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN------------------ 129 ++ + A ++ + + + I P N Sbjct: 205 DGNTWTTRAYISLARRKWKDADEELSRA-----IHLKPNVANNYVNRALARLNYNNLRGA 259 Query: 130 -VDY------------VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 DY +Y G+ Q+ D ++ +++ + Sbjct: 260 MADYDLALDLAPNDFLAHYNRGLLRMQLGDD--------NRAIEDFDFVIKMEPKN---- 307 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V N+ + + G+ +AI + V+ + + ++ Sbjct: 308 -----VMAIFNRALLHD--------RTGDLHSAIRDYSAVIDQFPN---FWTGLSYRANC 351 Query: 237 YVALALMDEAR 247 Y L + +A Sbjct: 352 YRRLGMTAKAE 362 >gi|158339139|ref|YP_001520316.1| TPR domain-containing protein [Acaryochloris marina MBIC11017] gi|158309380|gb|ABW30997.1| TPR domain protein [Acaryochloris marina MBIC11017] Length = 712 Score = 38.9 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 36/240 (15%), Positives = 73/240 (30%), Gaps = 64/240 (26%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-----YSAGKYQQAASLG 117 +A L++ + ++ A + ++ R P AF Q + G Q A Sbjct: 499 RATLYMAQTDYQSAIQDYSAIIRLDPKNV--------LAFSQRGSTRFIQGDQQGALKDY 550 Query: 118 EEYITQYPESKNV-------------------DYVYYLVGMSY------AQMIRDVPYDQ 152 ++ I P++ DY ++ + I + DQ Sbjct: 551 DQLIKLNPKNVEAYDRRAHVRRYSGNPQGALQDYR--MITKINPRNSRAYEQIASLSEDQ 608 Query: 153 RATKLMLQYMSRIVERYTN--SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 + + ++ N S Y + G+ Y K+ YV AI Sbjct: 609 NDLEGAIAAYGQLQTLKPNDTSVY-------------------MSRGQLYEKQKRYVEAI 649 Query: 211 PRFQLVLA--NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + ++ + + AR +A + R+V L Q++ ++E Sbjct: 650 ADYTKMIELQPFQTSWFIMRGSAR-EKAGQRAGAKADYRQVAKLYQQQGDSSSAKDWLER 708 >gi|156384208|ref|XP_001633223.1| predicted protein [Nematostella vectensis] gi|156220290|gb|EDO41160.1| predicted protein [Nematostella vectensis] Length = 287 Score = 38.9 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 56/161 (34%), Gaps = 25/161 (15%) Query: 70 EQNFSKAYEYFNQCSRDFP-FAGVARK--SLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 + + +A +F + R + + + + L+ Y GK+++A +E + Y + Sbjct: 121 QGKYEEARGHFKEALRLYQKTSDDQGQGNAHLLIGKTHYQQGKFEEAIGHYKEALRLYQK 180 Query: 127 SKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 + + + L+G ++ Q Q + + + Y + Sbjct: 181 TSDDQGQGEAHLLIGKTHDQ--------QGKYEEARGHFKEALRLYQKT--SDDQGQ--- 227 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + IG+ + +G+Y AI ++ L Y Sbjct: 228 ------GEAHLLIGKTHYLQGKYEEAIGHYKEALRLYQKTS 262 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 66/189 (34%), Gaps = 32/189 (16%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVAR---KSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 + + +A ++ + R + + K+ L GKY++A +E + Y + Sbjct: 41 QGKYEEAIGHYKEALRLYQRTSDDQGQGKAHLFIGNAHNLQGKYEEAIGHYKEALRLYQK 100 Query: 127 SKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-SPYVKGARFY 181 + + D + L+G ++ Q + + + Y S + Sbjct: 101 TSD-DQGQGKAHLLIGKTHNL--------QGKYEEARGHFKEALRLYQKTSDDQGQGNAH 151 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE---EAMARLVEAYV 238 + IG+ + ++G++ AI ++ L Y + EA + + + Sbjct: 152 LL------------IGKTHYQQGKFEEAIGHYKEALRLYQKTSDDQGQGEAHLLIGKTHD 199 Query: 239 ALALMDEAR 247 +EAR Sbjct: 200 QQGKYEEAR 208 >gi|115373495|ref|ZP_01460792.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1] gi|310825299|ref|YP_003957657.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115369501|gb|EAU68439.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1] gi|309398371|gb|ADO75830.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 273 Score = 38.9 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 21/47 (44%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 L A ++ G Y +A + ++ YP+ D +G +YAQ Sbjct: 15 QLGFAGALHAEGDYYRAIGEYKRFLYLYPDEPRADEARLSIGRAYAQ 61 >gi|71282583|ref|YP_269859.1| TPR domain-containing protein [Colwellia psychrerythraea 34H] gi|71148323|gb|AAZ28796.1| TPR domain protein [Colwellia psychrerythraea 34H] Length = 690 Score = 38.9 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 49/168 (29%), Gaps = 42/168 (25%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSV----TDVRYQREVYEK--------AVLFLK 69 LT+ FS++ V + S V +V ++++ A + Sbjct: 387 MPLTLLFSLSSISPVSFAASDSETVKSSDASTSEPNVNSASQLWQDLWKTSDQQAQQHYQ 446 Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 ++N+ +A + F + Y AG Y+QA + +S N Sbjct: 447 QENYQQAAKQFKV-------SQW-------QGSAHYKAGDYEQALQAFK-------QSDN 485 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 S + Q+ + + +E+ K Sbjct: 486 --------AQSLYNQGNSLAQLQK-VDEAIDAYKKALEKDPELNDAKD 524 >gi|67458813|ref|YP_246437.1| hypothetical protein RF_0421 [Rickettsia felis URRWXCal2] gi|67004346|gb|AAY61272.1| unknown [Rickettsia felis URRWXCal2] Length = 175 Score = 38.9 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 10/90 (11%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 Y ++ + ++ F +A +Y++Q S + F+ + +L Y+ KY +A Sbjct: 33 TSYPYALFNIGECYFQQGKFIEAIKYYSQISDNH-FSLY-QSALFNCGSSFYNLDKYAEA 90 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + + I + YY Y + Sbjct: 91 IEMYSK-IRKNSN-------YYQKAQYYLR 112 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 49/132 (37%), Gaps = 30/132 (22%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSR---DFPFAGVARKSLLMSAFVQYSAGKYQQAASLG- 117 K + + + + +A + +++ + +P+ +L + GK+ +A Sbjct: 7 TKGNNYFRNEKYKEAIKAYSKIDKSSTSYPY------ALFNIGECYFQQGKFIEAIKYYS 60 Query: 118 ---EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + + + Y + G S+ + + ++ S+I + NS Y Sbjct: 61 QISDNHFSLYQS------ALFNCGSSFYNLDKYA--------EAIEMYSKIRK---NSNY 103 Query: 175 VKGARFYVTVGR 186 + A++Y+ + Sbjct: 104 YQKAQYYLRECQ 115 >gi|322495316|emb|CBZ30620.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 617 Score = 38.9 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 12/80 (15%) Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAE-----HAEEAMARLVEAYVALALMDEAREV 249 IGR ++ EY AA F A Y E E++ L Y L +DEA + Sbjct: 53 NIGRVFIDMKEYGAAENAFTEAAAIYEQVEGDKSLEYAESLELLALCYTHLKFLDEAEKA 112 Query: 250 ----VSLIQ---ERYPQGYW 262 + + + Y W Sbjct: 113 FKDSIRIFRDQCYNYGNNSW 132 >gi|114666436|ref|XP_001173715.1| PREDICTED: cell division cycle protein 27 isoform 2 [Pan troglodytes] Length = 821 Score = 38.9 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 583 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 632 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 633 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 688 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 689 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 743 Query: 237 YVALALMDEA 246 Y L A Sbjct: 744 YKKLGQTHLA 753 >gi|53803527|ref|YP_114612.1| hypothetical protein MCA2191 [Methylococcus capsulatus str. Bath] gi|53757288|gb|AAU91579.1| hypothetical protein MCA2191 [Methylococcus capsulatus str. Bath] Length = 698 Score = 38.9 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 1/77 (1%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 E+ E A + E+++ A + + + A R++ M + G+ +A Sbjct: 150 KSPPAELQEAARRCMIEEDWPAAVALYTKLLQQ-TDASYHREAQEMVGVARERNGQSFRA 208 Query: 114 ASLGEEYITQYPESKNV 130 S E+Y+ YPE + Sbjct: 209 KSEYEKYLQLYPEGEGA 225 >gi|332884784|gb|EGK05040.1| hypothetical protein HMPREF9456_03193 [Dysgonomonas mossii DSM 22836] Length = 280 Score = 38.9 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 41/136 (30%), Gaps = 31/136 (22%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ---------REVYEKAVLFLK 69 + + L+ F + V F + Q + +V +DS T + V+ KA Sbjct: 1 MKRVILSYIFFLFV-FAISSYAQDTTNVKVDSATVKPSATIADNKGGNKTVFNKANELYN 59 Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARK-------SLL--MSAFVQYSAGKYQQAASLGEEY 120 +F KA + + + L Y + +A E Sbjct: 60 SGDFRKAIDLLE--------NEKNEQKKQGLESAELYYNLGNSYYRVNEIAKARLYYERA 111 Query: 121 ITQYPESK----NVDY 132 P + N+DY Sbjct: 112 HLLDPGDRDTKHNIDY 127 >gi|332707120|ref|ZP_08427178.1| glycosyltransferase [Lyngbya majuscula 3L] gi|332354145|gb|EGJ33627.1| glycosyltransferase [Lyngbya majuscula 3L] Length = 1933 Score = 38.9 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 63/213 (29%), Gaps = 52/213 (24%) Query: 60 VYEKAVLFLKEQNFSKAYEYF---------NQCSRDFPFAGVARKSLLMSAFVQYSAGK- 109 +Y++AV + N A YF +P A + A ++ G Sbjct: 690 LYQQAV----QNNPQDAKAYFYLGNLFTEEEAWEEAYPSYLKATQLQPNLAQAHHNLGDT 745 Query: 110 ------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 +++A + I PE + D + Sbjct: 746 LVKQQRWEEAVTAYRRAIEIQPEFSW-----------SYNNMGDALLKLERWQDAADVFR 794 Query: 164 RIVERYTNSPYV----KGARFYVTVGRNQL--AAKEVEIG-----RYY------LKRGEY 206 + +E + P+ A + + +E+ YY K G++ Sbjct: 795 KAIELKPDFPWSYQNLGDALQALEQWDEAIIAYRHGIEVKSDWPWSYYNLGQALAKTGQW 854 Query: 207 VAAIPRFQLVLANYSD----AEHAEEAMARLVE 235 + AI +Q + + H EA+AR+ E Sbjct: 855 LDAIACYQKAIELDPNFAKAYSHLGEALARIGE 887 >gi|295881341|gb|AAY16582.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 20 [Homo sapiens] Length = 992 Score = 38.9 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEXQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|254788153|ref|YP_003075582.1| tetratricopeptide repeat domain-containing protein [Teredinibacter turnerae T7901] gi|237686893|gb|ACR14157.1| tetratricopeptide repeat domain protein [Teredinibacter turnerae T7901] Length = 791 Score = 38.9 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 16/134 (11%), Positives = 42/134 (31%), Gaps = 16/134 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + + + + A + + + +S+++ AG+ +A + Sbjct: 505 YIRGMAASGKGDNEGAIAAMENLQKL---SPDSMRSMVLLVDAYIKAGQRDEAETFLNRV 561 Query: 121 ITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I P S Y Y+L G + + ++ + ++ A Sbjct: 562 IATDPNS----YTGYFLRGNLHLYF--------GEAEPAVRDYQQAIKNDPKKEGAYNAL 609 Query: 180 FYVTVGRNQLAAKE 193 + + ++A E Sbjct: 610 AKLNLRLGKVADAE 623 >gi|254510225|ref|ZP_05122292.1| TPR domain protein [Rhodobacteraceae bacterium KLH11] gi|221533936|gb|EEE36924.1| TPR domain protein [Rhodobacteraceae bacterium KLH11] Length = 202 Score = 38.9 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 44/137 (32%), Gaps = 20/137 (14%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSA 107 S + + E+ L + + A ++ + P FA ++ + Sbjct: 75 SQSGSASADLLLERGREALDDGDVEAALDHLTALTDHAPEFAEGWHVRAS-----AFFGV 129 Query: 108 GKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 ++ AA+ E +T P + Y Y +G+ + + + SR + Sbjct: 130 ERFGMAAADLEHALTLNPNN----YEAIYGLGLIFE--------IVGKPEQAFEAYSRAL 177 Query: 167 ERYTNSPYVKGARFYVT 183 + + V A + Sbjct: 178 AIHPHHEEVTNAVNRLK 194 >gi|217076661|ref|YP_002334377.1| tetratricopeptide repeat domain protein [Thermosipho africanus TCF52B] gi|217036514|gb|ACJ75036.1| tetratricopeptide repeat domain protein [Thermosipho africanus TCF52B] Length = 491 Score = 38.9 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 26/202 (12%), Positives = 64/202 (31%), Gaps = 39/202 (19%) Query: 60 VYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 YE + ++++ +A E + + F+ LL + G+++ A + Sbjct: 106 YYELGNVLYLKKDYDEAIEIYMKAFELNKEFS----LPLLKIGDTYFENGQFKDAEIAYK 161 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + + VY +G+ Y ++ + + + + Y Sbjct: 162 SALKI----EKLPQVYLRLGVLYNELQK--------FEKAEKIFRDGLSV----EYKPEI 205 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + ++ +L A+ + + NY + L + Sbjct: 206 AYNLSYTLIRLGKH--------------FQALQILKELANNYP-TPEVYNELGLLQK--- 247 Query: 239 ALALMDEAREVVSLIQERYPQG 260 L L ++A E + L E Y + Sbjct: 248 NLGLYEDAEENLKLAGEEYEEN 269 >gi|116252907|ref|YP_768745.1| TPR repeat-containing protein [Rhizobium leguminosarum bv. viciae 3841] gi|115257555|emb|CAK08652.1| conserved hypothetical TPR repeat receptor protein [Rhizobium leguminosarum bv. viciae 3841] Length = 1238 Score = 38.9 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 29/86 (33%), Gaps = 6/86 (6%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 G +++ ++ D + + + +L+ +A + S P +S Sbjct: 495 GRMKEAKHEIDTAIALDPSFDIALLARGRYYLQTGERDRALQDLLAASTANPAHS---QS 551 Query: 97 LLMSAFVQYSAGK---YQQAASLGEE 119 LM A Y G QQA + Sbjct: 552 QLMLAAAHYEKGDRIPSQQALDNADR 577 >gi|90961618|ref|YP_535534.1| hypothetical protein LSL_0641 [Lactobacillus salivarius UCC118] gi|90820812|gb|ABD99451.1| Hypothetical protein LSL_0641 [Lactobacillus salivarius UCC118] Length = 295 Score = 38.9 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 12/71 (16%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQA 113 E+Y +A K ++++KA + + K + + V + Y A Sbjct: 2 SELYFQAEEAYKNKDYTKARKLLEK--------EYLEKKTFRTNYFLFLVFFKIEDYIAA 53 Query: 114 ASLGEEYITQY 124 EYI QY Sbjct: 54 YETANEYIRQY 64 >gi|27365502|ref|NP_761030.1| tol-pal system protein YbgF [Vibrio vulnificus CMCP6] gi|320155884|ref|YP_004188263.1| hypothetical protein VVM_02032 [Vibrio vulnificus MO6-24/O] gi|27361650|gb|AAO10557.1| tol-pal system protein YbgF [Vibrio vulnificus CMCP6] gi|319931196|gb|ADV86060.1| TPR repeat containing exported protein/ Putative periplasmic protein contains a protein prenylyltransferase domain [Vibrio vulnificus MO6-24/O] Length = 260 Score = 38.9 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 16/127 (12%), Positives = 47/127 (37%), Gaps = 15/127 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + + + +S + + +++ G+ Y Sbjct: 147 YQNAVDLILKKRDYAGAIAAFKQFQKDFPDSNFAPNSHYWL--------------GQLYF 192 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A F V+ +Y D+ +A+ +L + ++A++ + +P Sbjct: 193 AQKQDKEAAKSFAAVV-SYKDSNKRADALVKLGDIAARNNNPEQAKKYYQQAIDEHPGSA 251 Query: 262 WARYVET 268 A+ ++ Sbjct: 252 SAKVAKS 258 Score = 36.2 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 40/128 (31%), Gaps = 23/128 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A + +++ +P+S +Y +G Y +D K + + + Sbjct: 156 KKRDYAGAIAAFKQFQKDFPDSNFAPNSHYWLGQLYFAQKQD--------KEAAKSFAAV 207 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V Y +S A + + A +Q + + + Sbjct: 208 VS-YKDSNKRADALVKLGDIA--------------ARNNNPEQAKKYYQQAIDEHPGSAS 252 Query: 226 AEEAMARL 233 A+ A ++L Sbjct: 253 AKVAKSKL 260 Score = 35.5 bits (81), Expect = 8.3, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 3/71 (4%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 LK+ +Y AI F+ ++ D+ A + L + Y A EA + + + Y Sbjct: 155 LKKRDYAGAIAAFKQFQKDFPDSNFAPNSHYWLGQLYFAQKQDKEAAKSFAAVVS-YKDS 213 Query: 261 YWARYVETLVK 271 + + LVK Sbjct: 214 N--KRADALVK 222 >gi|67920836|ref|ZP_00514355.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] gi|67856953|gb|EAM52193.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] Length = 380 Score = 38.9 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 50/168 (29%), Gaps = 21/168 (12%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARK 95 G + + D Y + + A + + P F K Sbjct: 107 GNHSAAVKYYQKALSLDSSNPNFYYALGDSLANVGDNNNAASAYYYAIQLNPKF----VK 162 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 S + V Y+ AA + I P + ++ Q+ Sbjct: 163 SYIGLGVVLLRQEDYEGAAEAYKRVIALDPNNPEA-----------FAIMGSSLLQQKQL 211 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 LQY+ V+R+ + + + L ++E+G+ +LKR Sbjct: 212 DQALQYLGNAVQRFP-----RDVDLRLLLATAYLQQGQLELGKEHLKR 254 >gi|323436017|ref|ZP_01049747.2| conserved hypothetical protein [Dokdonia donghaensis MED134] gi|321496332|gb|EAQ39719.2| conserved hypothetical protein [Dokdonia donghaensis MED134] Length = 845 Score = 38.9 bits (90), Expect = 0.83, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 27/67 (40%) Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 K EY A R + +L+ D + A L + Y ++ +A + I +YP Sbjct: 563 KFKEYPLAASRLEKLLSFKPDEKLVLPATYNLYQVYDSMGAFAKAETYKNEITTKYPDSR 622 Query: 262 WARYVET 268 +A + Sbjct: 623 YATRINN 629 >gi|241951018|ref|XP_002418231.1| small glutamine-rich tetratricopeptide repeat-containing protein, putative [Candida dubliniensis CD36] gi|223641570|emb|CAX43531.1| small glutamine-rich tetratricopeptide repeat-containing protein, putative [Candida dubliniensis CD36] Length = 344 Score = 38.9 bits (90), Expect = 0.83, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 44/131 (33%), Gaps = 16/131 (12%) Query: 35 LVGWERQSSRDVYLDSVTDVRY-----QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 V S + + +V ++ E+ + + +++++A + + P Sbjct: 73 TVSSNSTSEKSESVPAVKEIDADTKAKADELKVQGNRAMALKDYTEAIAKYTEAISLDPT 132 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 V L A S+ K+ +A E+ I P Y +G++ + Sbjct: 133 NVV---YLSNRAAAHSSSQKHDKAVEDAEKAIKLNPNFSK---AYSRLGLAKYALG---- 182 Query: 150 YDQRATKLMLQ 160 D +A + Sbjct: 183 -DAKAAMEAYK 192 >gi|196229622|ref|ZP_03128486.1| serine/threonine protein kinase [Chthoniobacter flavus Ellin428] gi|196225948|gb|EDY20454.1| serine/threonine protein kinase [Chthoniobacter flavus Ellin428] Length = 781 Score = 38.9 bits (90), Expect = 0.83, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 41/122 (33%), Gaps = 10/122 (8%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 FA+ +F + ++ +R + S + + + V L + A Sbjct: 372 FAMIVFVLLIGTGVL----LRNRILSGPSEEEAKKGSALVADGVDKLVGAKSTDAVTSLA 427 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES-KNVDYVYYLVGMS 140 + P + +++ Q+ AG + + + + P S K+ D G++ Sbjct: 428 ALAAQKPEQPWLNWADMLTGLAQFMAGNRPEGIAAFQRVEQRGPYSKKDAD-----KGLA 482 Query: 141 YA 142 Sbjct: 483 DF 484 >gi|157145618|ref|YP_001452937.1| tetratricopeptide repeat protein [Citrobacter koseri ATCC BAA-895] gi|157082823|gb|ABV12501.1| hypothetical protein CKO_01364 [Citrobacter koseri ATCC BAA-895] Length = 389 Score = 38.9 bits (90), Expect = 0.83, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 68/189 (35%), Gaps = 30/189 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ + +A + FNQ + + F A + L+ + + +Q+A + E + Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRVGALQ-QLLQIY--QATSDWQKAIDVAERLVKL 170 Query: 124 YPESKNVDYVYYLVGMSYAQMI-RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + + ++ ++ ++ QM D+ K NS Sbjct: 171 GKDKQRIEIAHFYCELALQQMGCDDMDRAMTLLKKGAAADK-------NS---------- 213 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 A + +GR ++ +GEY A+ Q V++ D E E + L Y L Sbjct: 214 -------ARVSIMMGRVFMAKGEYAKAVESLQRVIS--QDKELVSETLEMLQTCYQQLGK 264 Query: 243 MDEAREVVS 251 DE E + Sbjct: 265 NDEWAEFLR 273 >gi|148547360|ref|YP_001267462.1| cellulose synthase subunit BcsC [Pseudomonas putida F1] gi|148511418|gb|ABQ78278.1| cellulose synthase operon C domain protein [Pseudomonas putida F1] Length = 1172 Score = 38.9 bits (90), Expect = 0.83, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 53/165 (32%), Gaps = 17/165 (10%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 +A + + +P + R++L F + + A +L ++ P +++ Sbjct: 161 GQRPEAIRQLQRLDQQYPGSAGLRQTLTGWLFAEKRDRE---ALALLDQLARD-PGARDA 216 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 AQ D Q + ++RY SP + A + R LA Sbjct: 217 A----------AQREFDYLSGQAVSATSAAAWQAFLQRYPASPLLAQASETLQQQRKLLA 266 Query: 191 AKEVEI---GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 + G+ L +G A + + L Y A+ Sbjct: 267 DPAWQAGQRGKALLDKGRNAEAETQLRRALRQYPGDASLHGALGY 311 >gi|119489030|ref|ZP_01621965.1| TPR repeat protein [Lyngbya sp. PCC 8106] gi|119454986|gb|EAW36129.1| TPR repeat protein [Lyngbya sp. PCC 8106] Length = 155 Score = 38.9 bits (90), Expect = 0.83, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 47/129 (36%), Gaps = 21/129 (16%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +A ++L+ N +A Q D P FA R+++L Y +Y +A + ++ Sbjct: 46 QAEVWLQGGNSREAEGVLTQLIEDLPDFAEAWNRRAVL-----YYITEQYDKALADCKQV 100 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I P + +G+ YA M ++ + +E Y + Sbjct: 101 IELNPIHFG---AIHGMGLCYAAM--------GDFSAAIRAFRQALEIQP---YSVENQR 146 Query: 181 YVTVGRNQL 189 + +QL Sbjct: 147 LILECTSQL 155 >gi|119477999|ref|ZP_01618099.1| TPR domain protein [marine gamma proteobacterium HTCC2143] gi|119448912|gb|EAW30154.1| TPR domain protein [marine gamma proteobacterium HTCC2143] Length = 747 Score = 38.9 bits (90), Expect = 0.83, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 44/105 (41%), Gaps = 12/105 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y +L+++ +N A E + + P + + + A + +GK + A + ++ Sbjct: 653 YAIGLLYIRLKNLGLATESLQKAASLAPDISHYS----YVYAVALFESGKREWAITSLKQ 708 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + ++P + ++ L ++ + + + A + Q + R Sbjct: 709 TLNRHPGNPDI-----LSALASY--LNAMGRSEDAKRYADQLLER 746 >gi|111115034|ref|YP_709652.1| surface-located membrane protein 1 [Borrelia afzelii PKo] gi|110890308|gb|ABH01476.1| surface-located membrane protein 1 [Borrelia afzelii PKo] Length = 1013 Score = 38.9 bits (90), Expect = 0.83, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 32/109 (29%), Gaps = 31/109 (28%) Query: 69 KEQNFSKAYEYFNQ------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 ++N+ KA E F + + A +A L +EY Sbjct: 917 NQKNYQKAIEIFEKAIINSDIEAKY-----------NLATTLIEINDNTRAKDLLKEYTK 965 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 P + Y G+ + DQ + +++++ N Sbjct: 966 LKPNNPEALYAL---GIIEYNENNN---DQT--------LRELIKKFPN 1000 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK +N+ A +N P + + A +G QA S E+ Sbjct: 842 LYLKASINLKNENYQNAIPLYNLVIEKNPEN---ISAYINLAKAYEKSGNKTQAISTLEK 898 Query: 120 YI 121 I Sbjct: 899 II 900 >gi|149174501|ref|ZP_01853127.1| hypothetical protein PM8797T_09519 [Planctomyces maris DSM 8797] gi|148846611|gb|EDL60948.1| hypothetical protein PM8797T_09519 [Planctomyces maris DSM 8797] Length = 399 Score = 38.9 bits (90), Expect = 0.84, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 3/68 (4%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + G Y + +Y AAI + + D + A+AR +Y A + EA + Sbjct: 70 LLAGECYFVKKDYPAAIESLSQLNETFPDYRRSSFALAR---SYENTAKLAEAERTLKAH 126 Query: 254 QERYPQGY 261 +P Sbjct: 127 LAAFPDSQ 134 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 25/217 (11%), Positives = 55/217 (25%), Gaps = 36/217 (16%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +A FL E F ++ L++ + Y A Sbjct: 37 SRAQRFLAEGKPDATLNELEWLRW---FEPDQPRAQLLAGECYFVKKDYPAAIESLS--- 90 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF- 180 + Y S + R + + + + + +S Sbjct: 91 QLNETFPD-----YRR--SSFALARSYENTAKLA-EAERTLKAHLAAFPDSQEAVTQLQW 142 Query: 181 ------YVTVGRNQLAAKEVEIG-----RYY----LKRGEYVA--AIPRFQLVLANYSDA 223 + N L + +E + Y + +A +I + Sbjct: 143 IYFNQIRLRELENLL-ERSLETCPNQFLQLYHLLNTEHKNPIAQESIKLLNRINEKEPGQ 201 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 A+A + L +D+A+ + ++ PQ Sbjct: 202 PSIMRALAY---CHWKLGEIDQAKSYLEAARQAEPQN 235 >gi|124004753|ref|ZP_01689597.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC 23134] gi|123989876|gb|EAY29405.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC 23134] Length = 283 Score = 38.9 bits (90), Expect = 0.84, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 38/138 (27%), Gaps = 19/138 (13%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 KA +++N+ A + + A Y K+ A +Y Sbjct: 29 KAQKAFEDKNYLVAIHRYEHLVEQLQIND--PNVYINLAHAYYKTKKWLNAR----KYYV 82 Query: 123 QYPESKN---VDYVYYLVGMS---YAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---P 173 +++N Y+ +GM + + L+ + +++ + Sbjct: 83 LASKNENPTLSSLAYHQLGMISEENYNQDSSI----EDLRTALKLFKKAIKKNPKNLEAR 138 Query: 174 YVKGARFYVTVGRNQLAA 191 Y + A Sbjct: 139 YNYELLRKKLEALRKFAE 156 >gi|118384165|ref|XP_001025235.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89307002|gb|EAS04990.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 848 Score = 38.9 bits (90), Expect = 0.84, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 39/132 (29%), Gaps = 25/132 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K LK ++F +A EY+ + P A ++L+ +Y + + Sbjct: 137 NKGNEALKSKDFKEAIEYYTKSIEYDPKLAASYCNRALV-----YLKLKEYDKVIKDCNK 191 Query: 120 YITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 I P Y Y+ G + + I+E+ + Sbjct: 192 AIEIDPN-----YLKAYHRRGKARFAQDK--------VYEAYSDFKFIMEKDPENK---E 235 Query: 178 ARFYVTVGRNQL 189 + ++ L Sbjct: 236 VNGDLKECQDLL 247 >gi|21226703|ref|NP_632625.1| hypothetical protein MM_0601 [Methanosarcina mazei Go1] gi|20904990|gb|AAM30297.1| conserved protein [Methanosarcina mazei Go1] Length = 1024 Score = 38.9 bits (90), Expect = 0.84, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 71/219 (32%), Gaps = 43/219 (19%) Query: 56 YQREVYEKAVLFLK-------EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 Y R Y KA+ L E+NF KA E F+ P VA + Y Sbjct: 5 YARAWYSKALALLNLKNPIGSEKNFEKALEAFDALLEINPKDTVAWQYRGNILR--YLDR 62 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +A E+ + P +N+ Y G++ + + L+ ++ER Sbjct: 63 -PDEALEAFEKALAFDP--ENIP-ARYFKGLTLGYL--------NLPEKALEAFRGVIER 110 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEI--------------GRYYLKRGEYVAAIPRFQ 214 + GA +Y + NQL + G +Y RG + + + Sbjct: 111 DPEN---AGALYYSGLALNQLGRHTEAVSALSEALKINPDNPGAWYY-RGVSLYILGKCM 166 Query: 215 LVLANYSDA----EHAEEAMARLVEAYVALALMDEAREV 249 L + A +AY++L EA Sbjct: 167 EALEAFEKTLALEPSHAGAWEGKAKAYLSLGRRREALRA 205 >gi|304439484|ref|ZP_07399393.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372080|gb|EFM25677.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC BAA-1640] Length = 539 Score = 38.6 bits (89), Expect = 0.85, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 39/95 (41%), Gaps = 10/95 (10%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSL---- 97 + + +V ++ + ++++ + + N+ +A + F + + F K L Sbjct: 322 ETKVSNVKELIKSKNIFDEGNDSILKGNYLEAAKKFKKVSEKDEEH-FKEAQDKILDLER 380 Query: 98 --LMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 L A GK ++A E+++ P+S N Sbjct: 381 IFLDKAEALEDEGKVKEAIKTLEDFLAVVPDSANA 415 >gi|197122608|ref|YP_002134559.1| hypothetical protein AnaeK_2203 [Anaeromyxobacter sp. K] gi|196172457|gb|ACG73430.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. K] Length = 243 Score = 38.6 bits (89), Expect = 0.85, Method: Composition-based stats. Identities = 7/30 (23%), Positives = 11/30 (36%) Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A + L Y G + A + E Y+ Sbjct: 119 ALLAELARGDAHYKLGDWDAALASYERYLK 148 >gi|124005062|ref|ZP_01689904.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134] gi|123989314|gb|EAY28875.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134] Length = 466 Score = 38.6 bits (89), Expect = 0.85, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 62/175 (35%), Gaps = 29/175 (16%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y + + KA ++ + + A ++L A+ G + ++ Sbjct: 137 LYNIGYTYQSMGFYDKAIAFYKKALK-HNLNNEA--AVLELAYCLDITGNLEDGLEYYKK 193 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY-TNSPYVKGA 178 +I + P S +Y +GM+YA++ +Y + I + + Y++ Sbjct: 194 FIDENPYSFL---AWYHLGMTYAKLGN-----MTDALNAYEYSTLIKDDFAPG--YIEIG 243 Query: 179 RFYVTVGRNQLAA--------KEVEIGRYYLK-------RGEYVAAIPRFQLVLA 218 Y+T+ R A E Y K + EY AAI ++ + Sbjct: 244 NIYITLSRYDEAQKAFETALLHETFSADLYCKLAYTFELKKEYYAAITHYKEAME 298 >gi|330509112|ref|YP_004385540.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6] gi|328929920|gb|AEB69722.1| TPR-repeat protein [Methanosaeta concilii GP-6] Length = 598 Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 8/72 (11%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASL 116 K + + +A +++ P + ++L+ A+ + GKY +A Sbjct: 494 AKGDALNQSGRYEEAAFAYDKVVEQNPDSS---QALIAHAYGSKGDALSAWGKYDEAVIA 550 Query: 117 GEEYITQYPESK 128 + I YP Sbjct: 551 YDNAIENYPSEP 562 >gi|325926223|ref|ZP_08187581.1| putative xylanase/chitin deacetylase [Xanthomonas perforans 91-118] gi|325543405|gb|EGD14830.1| putative xylanase/chitin deacetylase [Xanthomonas perforans 91-118] Length = 883 Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 40/126 (31%), Gaps = 18/126 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E+ + KE+ ++ A E F + + P A + FV Y G++ ++A E + Sbjct: 774 ERGLQLYKEKRYADAAEQFAEALKLRP--DFA-LAANNLGFVYYRQGRFAESARWLENTL 830 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGAR 179 P ++Y + D+ + + + AR Sbjct: 831 KIDPS----------RAVAYLNLGDAYAKAGDRDKARKAYATYLELQ---PQGSGAEQAR 877 Query: 180 FYVTVG 185 + Sbjct: 878 AQLQSL 883 >gi|307634697|gb|ADI83237.2| lipoprotein, putative [Geobacter sulfurreducens KN400] Length = 696 Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 24/121 (19%) Query: 132 YV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 Y Y + A+ + D ++A VER+ P+V R +L Sbjct: 489 YAPELYRRILHDAEQLGDPTLMEKAAG-------EFVERFPAHPWV----QRF---REEL 534 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 AA E RG++ + R +LA+ E++ L ++ A +A Sbjct: 535 AAVE-------YNRGDFQRVVGRLSGMLAS-GTRPEYAESLYYLGKSLDASGNRRDAERA 586 Query: 250 V 250 + Sbjct: 587 M 587 >gi|238922452|ref|YP_002935965.1| hypothetical protein EUBREC_0026 [Eubacterium rectale ATCC 33656] gi|238874124|gb|ACR73831.1| Hypothetical protein EUBREC_0026 [Eubacterium rectale ATCC 33656] Length = 877 Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 39/175 (22%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+YEKA + A + + + R + A V G Y A + Sbjct: 48 EIYEKAE------RYQDARDILLMAYDR---SPIGRMIIYRLAEVAIKMGDYDAATEYYD 98 Query: 119 EYITQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E++ P ++ YV Y + ++ + I+E Y + Y + Sbjct: 99 EFVEIAP-HDDMKYVLRYAI--------------KKGQGASFDELITILEEYKDEEYTEE 143 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 + + Y K G+ I ++ + D + E A+ Sbjct: 144 WAYELAYL--------------YHKAGKADKCIDACDELILWFGDGPYVERALEL 184 >gi|261416281|ref|YP_003249964.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|156072342|gb|ABU45493.1| TPR domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372737|gb|ACX75482.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302325833|gb|ADL25034.1| tetratricopeptide repeat protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 746 Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 67/214 (31%), Gaps = 37/214 (17%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ------QAA 114 Y A+ + F +A F + +P + ++ Y A ++ A Sbjct: 339 YRAAMRLYLNRQFLEAAYAFGKVQTKYPAFHLVDQA------AFYKAKSFENLRMHKAAK 392 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 S+ E+ I +YP+S + Q++ + Y + + I +++ S Sbjct: 393 SVYEDAIKRYPQSD-------QRAKYHFQLMN-IDYKEGKYTEAMTKYQNIAQKFGESDV 444 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 A + + ++G Y ++ +L + A + Sbjct: 445 KADADYVAGQIK--------------FEQGLYQESVDLLASIL---PGNANYFYARYTMG 487 Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 A + DEA I E+ R ++ Sbjct: 488 IANSRMGKFDEAENCFRDITEQPVSNQSERDLQD 521 >gi|114666432|ref|XP_001173722.1| PREDICTED: cell division cycle protein 27 isoform 3 [Pan troglodytes] Length = 776 Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 538 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 587 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 588 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 643 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 644 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 698 Query: 237 YVALALMDEA 246 Y L A Sbjct: 699 YKKLGQTHLA 708 >gi|2407970|emb|CAA75047.1| TOM70 [Podospora anserina] Length = 614 Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 20/135 (14%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92 +G ++ D + Y +A L + F+ A + + + DF F+ Sbjct: 378 LGAPDKAEEDFEAALAKNPEDPDIYYHRAQLHFIKGEFADAQKDYQKSIDLDPDFIFSH- 436 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + QY G + + I +P+ +V Y YY ++ DQ Sbjct: 437 -----IQLGVTQYKLGSIASSMATFRRCIKNFPKIPDV-YNYY----------GELLLDQ 480 Query: 153 RATKLMLQYMSRIVE 167 ++ +E Sbjct: 481 TKFSEAIEKFDTAIE 495 >gi|73965120|ref|XP_860053.1| PREDICTED: similar to Cell division cycle protein 27 homolog (CDC27Hs) (H-NUC) isoform 6 [Canis familiaris] Length = 778 Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 540 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 589 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 590 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 645 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 646 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 700 Query: 237 YVALALMDEA 246 Y L A Sbjct: 701 YKKLGQTHLA 710 >gi|325474400|gb|EGC77587.1| lipoprotein [Treponema denticola F0402] Length = 153 Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 39/102 (38%), Gaps = 7/102 (6%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + + A+ L + + ++T + E+ ++A L + A EY+ Sbjct: 14 LLILTAAISLLFSCSSLPTDETVPANLTPI----ELNQRAQAELDNGSLRNALEYYKIVI 69 Query: 85 RDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGEEYITQY 124 + + + + + A + S K+ +A + + I +Y Sbjct: 70 KRY-GTDASTRTAAEYEIAHIYISQKKWLEADDMLKNIIDRY 110 >gi|218462864|ref|ZP_03502955.1| TPR repeat-containing protein [Rhizobium etli Kim 5] Length = 848 Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 6/84 (7%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +++ R++ D + + + +L+ KA + S P +S L Sbjct: 85 MKEAKREIDTAIALDPSFDIALLARGRYYLQTGERDKALQDLLAASTANPAHS---QSQL 141 Query: 99 MSAFVQYSAGK---YQQAASLGEE 119 M A Y G QQA + Sbjct: 142 MLAAAHYEKGDRIPSQQALDNADR 165 >gi|260824477|ref|XP_002607194.1| hypothetical protein BRAFLDRAFT_68009 [Branchiostoma floridae] gi|229292540|gb|EEN63204.1| hypothetical protein BRAFLDRAFT_68009 [Branchiostoma floridae] Length = 1218 Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 29/126 (23%) Query: 61 YEKAVLFLKEQNFSKAYEYFN-QCS---------RDFPFAGVARKSLLMSAFVQYSAGKY 110 Y A+ L + A F ++ P +A SL+ Y Y Sbjct: 615 YGLALQNL-TGQQTNAIRLFEQALEESRKQNAPAKEHP--QIAM-SLIKLGASYYRRANY 670 Query: 111 QQAASLGEE----YITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 +A EE Y + ++ L+G+S+ + + L Y+ Sbjct: 671 IEAIKYIEEGLTMYRKIHDHDTAHSDIAEALNLLGLSFDKA--------GDHEKALDYLH 722 Query: 164 RIVERY 169 + +E + Sbjct: 723 QTLEMH 728 >gi|166154025|ref|YP_001654143.1| TPR repeat-containing protein [Chlamydia trachomatis 434/Bu] gi|166154900|ref|YP_001653155.1| TPR repeat-containing protein [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335225|ref|ZP_07223469.1| TPR repeat-containing protein [Chlamydia trachomatis L2tet1] gi|165930013|emb|CAP03496.1| tetratricopeptide repeat protein [Chlamydia trachomatis 434/Bu] gi|165930888|emb|CAP06450.1| tetratricopeptide repeat protein [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 335 Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 17/148 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + +Y KAV+ ++ A + + P K+ + ++ + + Sbjct: 141 DPWNPQGLYNKAVILSDMEDEEGAIDLLESTVKRNPL-YW--KAWVKLGYLLSRNKIWDR 197 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A E + P ++ +Y +G+ Y + + T+L L+ + N+ Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQESLLL--NA 244 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYY 200 A FY+ + L E +Y Sbjct: 245 EDA-DAHFYIGLAHMDLKQNEQAYDAFY 271 >gi|150007599|ref|YP_001302342.1| hypothetical protein BDI_0952 [Parabacteroides distasonis ATCC 8503] gi|256839786|ref|ZP_05545295.1| BatE protein [Parabacteroides sp. D13] gi|149936023|gb|ABR42720.1| BatE, TRP domain containing protein [Parabacteroides distasonis ATCC 8503] gi|256738716|gb|EEU52041.1| BatE protein [Parabacteroides sp. D13] Length = 255 Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 33/106 (31%), Gaps = 19/106 (17%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 +FF + +C + Q + ++A + +++++KA E + Sbjct: 10 VLFFLLTLCLIGSAYAQDTAL----------------KEAEVAYTKEDYAKAIELYEGIL 53 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + A Y AGK A E + P + Sbjct: 54 KSN--GESAA-VYYNLGNTYYKAGKIAPAILNYERCLLLDPGDSDA 96 >gi|124003812|ref|ZP_01688660.1| TPR repeat protein [Microscilla marina ATCC 23134] gi|123990867|gb|EAY30334.1| TPR repeat protein [Microscilla marina ATCC 23134] Length = 236 Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 66/203 (32%), Gaps = 45/203 (22%) Query: 62 EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAAS 115 EK F++E NF +A YFN + + +AF +S Y A Sbjct: 28 EKGRTFMQEGNFKEAVRYFNWAVEK---------DAQSYAAFNARGAAYFSLKDYDNALL 78 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + I + DY ++ + +R T + ++ + + V Sbjct: 79 DFNQSIKLN----DKDYKAFM----------NRGNVRRETNDLKGALADYTQALPLNNNV 124 Query: 176 KGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYSD 222 V QL + + + Y RG + +F+ +A++ Sbjct: 125 PDLYLNRGVVNAQLQNYDAALKDFNEVIKRNKQNKNAYYNRGNILYTQKKFKEAIADFRT 184 Query: 223 AEHAEEAMARLVEAYVALALMDE 245 A + AR +A AL + + Sbjct: 185 AVQLD---ARFAKALYALGMAEL 204 >gi|119486064|ref|ZP_01620126.1| hypothetical protein L8106_06070 [Lyngbya sp. PCC 8106] gi|119456839|gb|EAW37967.1| hypothetical protein L8106_06070 [Lyngbya sp. PCC 8106] Length = 407 Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 15/78 (19%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G Y +A I P D YY G++Y ++ + + + Q ++ Sbjct: 341 GDYTEA-------IRLNPG--YAD-AYYNRGLAYLEL-KKLDLAIADFQQAAQLYRQLGR 389 Query: 168 RYTNSPYVKGARFYVTVG 185 + Y A + Sbjct: 390 ---EASYA-DAVQRIQEL 403 >gi|70988899|ref|XP_749301.1| mitochondrial outer membrane translocase receptor (TOM70), putative [Aspergillus fumigatus Af293] gi|66846932|gb|EAL87263.1| mitochondrial outer membrane translocase receptor (TOM70), putative [Aspergillus fumigatus Af293] gi|159128715|gb|EDP53829.1| mitochondrial outer membrane translocase receptor (TOM70), putative [Aspergillus fumigatus A1163] Length = 630 Score = 38.6 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 20/141 (14%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92 +G + ++ D L + Y +A L F++A + + + R F F+ Sbjct: 390 LGNKDAAADDFELAITHNKDDPDIYYHRAQLHFILGEFAEAAKDYQKSIDLDRTFIFSH- 448 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + QY G A + + + ++V VY ++ DQ Sbjct: 449 -----IQLGVTQYKMGSVASAMATFRRSVKNF---EDVPDVY--------NYYGELLLDQ 492 Query: 153 RATKLMLQYMSRIVERYTNSP 173 + ++ + VE S Sbjct: 493 QNFSEAIEKFDKAVEMEKQSK 513 >gi|255037563|ref|YP_003088184.1| hypothetical protein Dfer_3815 [Dyadobacter fermentans DSM 18053] gi|254950319|gb|ACT95019.1| Tetratricopeptide domain protein [Dyadobacter fermentans DSM 18053] Length = 233 Score = 38.6 bits (89), Expect = 0.87, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 47/148 (31%), Gaps = 35/148 (23%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG----VARKSLLMSAFVQY 105 TD Y V LK+ + +A F+ + ++ + Sbjct: 103 KGTDASNLASFYA-GVALLKQGKYDEAISRLQS------FSSSDLLIHARAQSLIGDAYL 155 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDY--------VYYLVGMSYAQMIRDVPYDQRATKL 157 + +A S + K DY VY + ++ AQ + P D Sbjct: 156 EKNQAAEAISYYK---------KAADYEKNEYFTPVYLMK-LALAQEKANQPAD------ 199 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVG 185 + R+V+ + S V A+ Y+ + Sbjct: 200 AVATYKRVVDEFPLSSEVVNAKKYMGLL 227 >gi|209527987|ref|ZP_03276470.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] gi|209491584|gb|EDZ91956.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] Length = 265 Score = 38.6 bits (89), Expect = 0.87, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 72/222 (32%), Gaps = 64/222 (28%) Query: 60 VYEKAVLFLKEQN-FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQ 111 Y + V+ + N ++A F Q R P Y +Y Sbjct: 79 YYNRGVVRFRIGNNLTEAIADFTQAIRINP----------EYVDAYYNRAIARVKVQQYW 128 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + I+ P D +YL G+ Y++ ++D + + + + Sbjct: 129 PAIDDVTQVISLDPSH---DRAFYLRGLIYSENLKDY-------QTGINDFTEAIRLNPR 178 Query: 172 S--PYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLV 216 + PY K ++ +E I Y Y R AI R+Q Sbjct: 179 NPAPYFKRGNARY-----RIGDRERAIDDYNKAIDINPSDPEPYYNR-----AISRYQ-- 226 Query: 217 LANYSDAEHAEEAMARLVEA---YVALALMDEAREVVSLIQE 255 + + A+ L ++ Y+ L ++ ++ + +++ Sbjct: 227 IGDRQG------AIFDLQKSADLYLDLGNFEKYQKAIDTLEK 262 >gi|197105306|ref|YP_002130683.1| hypothetical protein PHZ_c1843 [Phenylobacterium zucineum HLK1] gi|196478726|gb|ACG78254.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 488 Score = 38.6 bits (89), Expect = 0.87, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 58/179 (32%), Gaps = 41/179 (22%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N A +++ +P A AR A Y + +A L + + + P++ Sbjct: 283 NPQVAITKYSETDASYP-ARYAR------AIAYYQLREPDRAIRLIDAMLQEQPDNP--- 332 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK-GARFYVTVGRNQLA 190 Y++ L G + R T+ + R V ++P ++ + ++ A Sbjct: 333 YLWELKGQILFEFAR--------TEEAEEPQRRSVALKPDAPLLRVNLGQTLIALPDK-A 383 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA--RLVEAYVALALMDEAR 247 E + R + + A+A L EAY L AR Sbjct: 384 KVEEGVAEL---RKA----------------LTQEEDNAVAWRLLAEAYDKLGQDGMAR 423 >gi|171693707|ref|XP_001911778.1| hypothetical protein [Podospora anserina S mat+] gi|170946802|emb|CAP73606.1| unnamed protein product [Podospora anserina S mat+] Length = 614 Score = 38.6 bits (89), Expect = 0.87, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 20/135 (14%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92 +G ++ D + Y +A L + F+ A + + + DF F+ Sbjct: 378 LGAPDKAEEDFEAALAKNPEDPDIYYHRAQLHFIKGEFADAQKDYQKSIDLDPDFIFSH- 436 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + QY G + + I +P+ +V Y YY ++ DQ Sbjct: 437 -----IQLGVTQYKLGSIASSMATFRRCIKNFPKIPDV-YNYY----------GELLLDQ 480 Query: 153 RATKLMLQYMSRIVE 167 ++ +E Sbjct: 481 TKFSEAIEKFDTAIE 495 >gi|162453226|ref|YP_001615593.1| hypothetical protein sce4950 [Sorangium cellulosum 'So ce 56'] gi|161163808|emb|CAN95113.1| putative membrane protein [Sorangium cellulosum 'So ce 56'] Length = 416 Score = 38.6 bits (89), Expect = 0.87, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 32/116 (27%), Gaps = 21/116 (18%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + A L + D+ + +Y + A + Sbjct: 1 MKTSLCVVLMAFATTALAPSAASAEEDIEQ--------AKALYNAGAQAYAATRYRDAVQ 52 Query: 79 YFNQCSRDFPFAGVARKSLL-MSAFVQ---YSAGKYQQ----AASLGEEYITQYPE 126 F R P R +LL A Y + + A + Y+ Q P+ Sbjct: 53 SFEAAYRKAP-----RPALLFSLAQAYRRLYVVEQSPEALRAAIANYRRYLEQVPQ 103 >gi|148264105|ref|YP_001230811.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4] gi|146397605|gb|ABQ26238.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens Rf4] Length = 573 Score = 38.6 bits (89), Expect = 0.87, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 76/208 (36%), Gaps = 35/208 (16%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++ + Q+ Y A + + ++F +A E F + P + +L F+ Sbjct: 305 KEFTEILGQEPDAQQVRYYLASTYEEMEDFDRAIEEFKKIP---PSSAHYFDALGHLGFL 361 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 G+ ++ +L +E IT P ++ L G+ + + L+ ++ Sbjct: 362 YKENGEPEKGIALLKEAITNQPN--RIELYLNLAGL--YESMDQFA-------EGLRVLT 410 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 + + N P + F + V +++ K+ I R + +A Sbjct: 411 DVEGNFPNDPRL---SFRMGVLYDKMGNKDESIAR----MKKVIALA------------- 450 Query: 224 EHAEEAMARLVEAYVALALM-DEAREVV 250 + +A+ L Y L + DEA + + Sbjct: 451 PNDAQALNYLGYTYAELGVNLDEALQYL 478 Score = 37.8 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 68/225 (30%), Gaps = 56/225 (24%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 +A Y+ + P L A +Y++A + + + P+S + Y Sbjct: 131 KEAIPYYKKALEIDPS---KEDIYLHLAIAYVKGFEYEEAVNTLKVLLKVNPDS-AIGY- 185 Query: 134 YYLV-----------GMSYAQMIRDVPYD--------------QRATKLMLQYMSRI--- 165 YYL +Y + ++ D Q + + + Sbjct: 186 YYLGKTYDQMKLSKDAANYYKKAVELKPDFEQAIIDLGISQEMQGLAGEAINTYNELLRI 245 Query: 166 -----------VERYTNSPYVKGARFYVTVGRNQ----LAAKEVE--IGRYYLKRGEYVA 208 V+ Y + A +T+ +N + +E IG YL+ Y Sbjct: 246 NPVNYNVIQHLVQLYIQQKRLNDA---LTLLKNMADSGIGGQETHRKIGLIYLEMERYDD 302 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 AI F +L DA+ L Y + D A E I Sbjct: 303 AIKEFTEILGQEPDAQQVR---YYLASTYEEMEDFDRAIEEFKKI 344 >gi|116623520|ref|YP_825676.1| polysaccharide deacetylase [Candidatus Solibacter usitatus Ellin6076] gi|116226682|gb|ABJ85391.1| polysaccharide deacetylase [Candidatus Solibacter usitatus Ellin6076] Length = 899 Score = 38.6 bits (89), Expect = 0.87, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 3/69 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 L+ +A Y + + P +++ A V G+ +A EEY+ Sbjct: 824 NLGFLYFAMGRNDEAATYLEKTLQLDP---KRKEAHGNIAEVYLKMGRKPEAKQHYEEYL 880 Query: 122 TQYPESKNV 130 YP S Sbjct: 881 RLYPASPKA 889 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 44/136 (32%), Gaps = 27/136 (19%) Query: 50 SVTDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-SAFVQY 105 R + Y+ +A + + +A + + + P + LL F+ + Sbjct: 775 PAPATRSVSKAYDLDRQARDLFRARKLDEALKKSQEAVKLKPNDPI----LLNNLGFLYF 830 Query: 106 SAGKYQQAASLGEEYITQYP----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + G+ +AA+ E+ + P N+ V YL + Q+ Sbjct: 831 AMGRNDEAATYLEKTLQLDPKRKEAHGNIAEV-YLK----------MGRKP----EAKQH 875 Query: 162 MSRIVERYTNSPYVKG 177 + Y SP + Sbjct: 876 YEEYLRLYPASPKAEE 891 >gi|196016514|ref|XP_002118109.1| hypothetical protein TRIADDRAFT_62131 [Trichoplax adhaerens] gi|190579322|gb|EDV19420.1| hypothetical protein TRIADDRAFT_62131 [Trichoplax adhaerens] Length = 1424 Score = 38.6 bits (89), Expect = 0.88, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 73/224 (32%), Gaps = 48/224 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ-CSRD-----FPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + ++ + N+ +A + + + +A Y GK ++A + Sbjct: 692 NIGLSYIDQGNYEEAISTYKKTLENQLSVLGHHHSDIAILYN-NLGKAYYRQGKREEAVT 750 Query: 116 LGEEY--ITQ----YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + ++ I + +V Y +G++Y+ + + + Sbjct: 751 MFKKSLEIQLSVLGH-NHPDVASSYNNIGLAYSGQGKH---------------EEAIRMF 794 Query: 170 TNSPYVKGARFYVTVGRNQ--LAAKEVEIGRYYLKRGEYVAAIPRFQ-----LVLANYSD 222 S +K A G N LA + IG Y + ++ AI ++ +LA+ D Sbjct: 795 QKSLKIKVA----VFGHNHLDLADTYMNIGITYYYQHKHQEAISMYEKSLSIQLLAHGHD 850 Query: 223 AEHAEEAMARLVEAYVALALMDEA--------REVVSLIQERYP 258 L Y +EA + +S++ +P Sbjct: 851 HPDIATIYINLGNVYNDQGKYEEAISVFEKSLKMQMSVLDHNHP 894 >gi|81299019|ref|YP_399227.1| TPR repeat-containing protein [Synechococcus elongatus PCC 7942] gi|81167900|gb|ABB56240.1| TPR repeat [Synechococcus elongatus PCC 7942] Length = 923 Score = 38.6 bits (89), Expect = 0.88, Method: Composition-based stats. Identities = 14/117 (11%), Positives = 36/117 (30%), Gaps = 14/117 (11%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + Y++A+ + F A ++ D P A +L + Y + + Sbjct: 4 TAAAQHDYQQAIAAYQAGEFEAAIAQLDRLLGDVP--DWAA-ALGLQGLCYYCCDQKETG 60 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +L I P ++ + ++ Q L+ +++ + Sbjct: 61 ITLLRRAIALDPTDP-----------THFNNLGNLLQRQGHLTEALERLTQALAIDP 106 >gi|68846072|sp|P89105|CTR9_YEAST RecName: Full=RNA polymerase-associated protein CTR9; AltName: Full=Centromere-binding factor 1-dependent protein 1; AltName: Full=Cln three-requiring protein 9 gi|1420046|emb|CAA99166.1| CTR9 [Saccharomyces cerevisiae] Length = 1077 Score = 38.6 bits (89), Expect = 0.88, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 51/156 (32%), Gaps = 33/156 (21%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARK------------------------------SLL 98 + ++ KA + + + + PF A + L Sbjct: 676 SKHSYLKAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNEDVQL 735 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRAT 155 A +Y +A E + ++ K ++ L+G ++ V + Q+A Sbjct: 736 NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKETSVNFYQKAL 795 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 + + V+ + S ++ +F + + Q+A Sbjct: 796 ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAE 831 >gi|296126637|ref|YP_003633889.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] gi|296018453|gb|ADG71690.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] Length = 804 Score = 38.6 bits (89), Expect = 0.88, Method: Composition-based stats. Identities = 23/199 (11%), Positives = 58/199 (29%), Gaps = 38/199 (19%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-YSAGKYQ 111 D ++ +++KA Y ++ + +A + Y K + Sbjct: 5 DKSNIERLFNLGHEAFSNNDYNKAINYLDEIIDIYNKDIIAYSDGEFIIYSDSYDDNKNE 64 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 ++ + YY +S + + + ++ +++E + Sbjct: 65 DEERNIDD-EEINITHNTLVDAYYNRAISKFNL--------KNYEEAIKDFDKVIELSPD 115 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE---- 227 A Y RG + + R++ + ++ + Sbjct: 116 ---KTDA---------------------YYNRGHSKSYLKRYEEGIEDFKKVLEFDEDDF 151 Query: 228 EAMARLVEAYVALALMDEA 246 EA+ + Y LA +EA Sbjct: 152 EAVYYVGLGYFYLANYEEA 170 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 63/213 (29%), Gaps = 51/213 (23%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 D ++T Y +A+ +N+ +A + F++ P Sbjct: 71 DDEEINITHNTLVDAYYNRAISKFNLKNYEEAIKDFDKVIELSP----------DKTDAY 120 Query: 105 YSAG-------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 Y+ G +Y++ ++ + ++ Y VG+ Y + + Sbjct: 121 YNRGHSKSYLKRYEEGIEDFKKVLEF---DEDDFEAVYYVGLGYFYL--------ANYEE 169 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 ++ Y+ E I Y RG + + R++ L Sbjct: 170 AIKNF--------------DLALYLIEKTE-----EEYIADIYYYRGHSKSYLTRYEEAL 210 Query: 218 ANY----SDAEHAEEAMARLVEAYVALALMDEA 246 +++ E EA L L +EA Sbjct: 211 SDFNKLVQLREDDSEAFYFKALTEFYLGLYEEA 243 >gi|289619165|emb|CBI54433.1| unnamed protein product [Sordaria macrospora] Length = 466 Score = 38.6 bits (89), Expect = 0.88, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 35/99 (35%), Gaps = 16/99 (16%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +K + L++ +++ A + ++ + + LL + A + A E Sbjct: 8 QKGIDALEKGDYAAAISHLDKALE-----SSNSPAWLLARSKAHQKAKDLEAALHDAE-- 60 Query: 121 ITQYPESK--------NVDYVYYLVGMSYAQMIRDVPYD 151 + + ++ ++ Y + Y Q+ R D Sbjct: 61 LAYHVAAERGSGTSRSHMIQAQYRRAVIYYQLGRFADAD 99 >gi|225620848|ref|YP_002722106.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] gi|225215668|gb|ACN84402.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] Length = 798 Score = 38.6 bits (89), Expect = 0.88, Method: Composition-based stats. Identities = 24/201 (11%), Positives = 63/201 (31%), Gaps = 39/201 (19%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-YSAGK 109 + D + +++ +++ KA +Y ++ + +A + Y Sbjct: 1 MDDKKNIERLFDLGNDAFISKDYEKAIKYLDEVIDIYNRDIIAYSDSEFIIYSDSYDNED 60 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 ++ ++ +E I + YY G+SY + + + ++ +++E Sbjct: 61 EEEGKNINDEDINN--THNILVDTYYNRGLSYFNL--------KNYEEAIKDFDKVIELS 110 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA----EH 225 Y RG + + +++ + ++ E Sbjct: 111 PEKSNA------------------------YYNRGHSKSYLGKYEEGIKDFKKVLEFNED 146 Query: 226 AEEAMARLVEAYVALALMDEA 246 EA+ + Y L EA Sbjct: 147 DAEAIYYIGLGYFYLGRYQEA 167 Score = 35.5 bits (81), Expect = 7.6, Method: Composition-based stats. Identities = 17/135 (12%), Positives = 44/135 (32%), Gaps = 17/135 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E+ ++ + N+ A + F + + A A + +Y+ A I Sbjct: 461 ERGLIHYRNSNYDLAIKDFKKVIELDNESVYAN---YHLALSYDALEEYETALKYYARVI 517 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P + + YY ++ +M ++ ++++ + A F Sbjct: 518 ELDPNTPDS---YYNRALAEIEM--------ELYNEAIEDFYKVIDIDNT---IIDAYFN 563 Query: 182 VTVGRNQLAAKEVEI 196 + + + L + I Sbjct: 564 IGICYDSLKEHQKAI 578 >gi|224369967|ref|YP_002604131.1| putative Zn-dependent metalloprotease (TPR repeat protein) [Desulfobacterium autotrophicum HRM2] gi|223692684|gb|ACN15967.1| putative Zn-dependent metalloprotease (TPR repeat protein) [Desulfobacterium autotrophicum HRM2] Length = 438 Score = 38.6 bits (89), Expect = 0.88, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 51/153 (33%), Gaps = 22/153 (14%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSA 107 SV R E + ++ ++ + A F + + P + ++ M Sbjct: 280 SVRADRAAIEALQAGDQYMAKKEYQTAETQFAKAIKLAPEDYTAHVMQAKCML-----ET 334 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 ++++AA+ + +T YP+ Y+ G + + + + R Sbjct: 335 RRFERAATHADLAVTLYPDEPQ---AQYVAGFVHLNLNQFA--------RAFERFDRYAG 383 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 +P GA F+ + ++ +Y Sbjct: 384 LLPGNP---GAIFFKGYCQEKM-EHVASAAEFY 412 >gi|149061046|gb|EDM11656.1| aspartate-beta-hydroxylase (predicted), isoform CRA_a [Rattus norvegicus] gi|149061047|gb|EDM11657.1| aspartate-beta-hydroxylase (predicted), isoform CRA_a [Rattus norvegicus] Length = 506 Score = 38.6 bits (89), Expect = 0.88, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 25/80 (31%), Gaps = 17/80 (21%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 + + + +V RY SP + + + LA K +R V Sbjct: 100 RKRGKIEEAVSAFEELVRRYPQSPRARYGKA---QCEDDLAEK---------QRSNEV-- 145 Query: 210 IPRFQLVLANYSDAEHAEEA 229 + + Y +A +A Sbjct: 146 ---LRRAIETYQEAASLPDA 162 >gi|25028865|ref|NP_738919.1| putative transcription regulator [Corynebacterium efficiens YS-314] gi|259507927|ref|ZP_05750827.1| LuxR family bacterial regulatory protein [Corynebacterium efficiens YS-314] gi|23494151|dbj|BAC19119.1| putative transcription regulator [Corynebacterium efficiens YS-314] gi|259164422|gb|EEW48976.1| LuxR family bacterial regulatory protein [Corynebacterium efficiens YS-314] Length = 895 Score = 38.6 bits (89), Expect = 0.88, Method: Composition-based stats. Identities = 10/70 (14%), Positives = 26/70 (37%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + + D + + E+ + + + +A + + ++ A + +L S Sbjct: 343 EAFAATEPDSPAVKALAERGLALGRSGRWMEAAHALSLATNRTAYSEEADRYMLESIDAL 402 Query: 105 YSAGKYQQAA 114 SA QA Sbjct: 403 ISASDLPQAR 412 >gi|332706898|ref|ZP_08426959.1| putative NTPase, NACHT family protein [Lyngbya majuscula 3L] gi|332354782|gb|EGJ34261.1| putative NTPase, NACHT family protein [Lyngbya majuscula 3L] Length = 1975 Score = 38.6 bits (89), Expect = 0.89, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + A+ +L+ N+ +A E ++ P + + A Y +Y++A + Sbjct: 995 FVTALSYLRPNNYDQAIEILDEI-NQQPNSPIKGYIAWAIATCYYKKEEYEKAIGFYQ 1051 Score = 35.5 bits (81), Expect = 7.6, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 67/232 (28%), Gaps = 54/232 (23%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 Q SRD+Y Y A + + +A +Y Q A + L Sbjct: 1610 HQQSRDLYQQLDKQKDVADSWYWLADCYRNWGKYQQAVDY--QLKTL------AIRQQLD 1661 Query: 100 ----SAFVQYSAG-------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 A Y G +Y+ A + ++ Y + + + + + Sbjct: 1662 DQPRIALAYYQLGRIYESWGQYENAIASYQQSRELYDQ------------LDLQKNVANQ 1709 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 L S+ ++ Y S QL E I Y K G Sbjct: 1710 WRWLGDCYQELGDYSKAIDYYQQS----------LNLHQQLGQNE-YIANRYRKIGN--- 1755 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL---MDEAREVVSLIQERY 257 Q +LA + EA+ L + ++ + +A + + + Y Sbjct: 1756 ----SQRLLAR--NTPDTTEALHLLNQGEQSIGQAIEISQANDYKANLAYNY 1801 Score = 35.5 bits (81), Expect = 8.5, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 67/226 (29%), Gaps = 52/226 (23%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-----------SAFVQYSAGKYQQ 112 ++ + +A Y+ Q + L + +YQQ Sbjct: 1114 GRIYQDWGKYDQAIPYYEQGRDLYQ--------QLDKQKDVANLWYWLGDCYRLSSEYQQ 1165 Query: 113 AAS-----LGEEYITQYPESK-NVDYVYYLVG------------MSYAQMIRDV--PYDQ 152 A L I Q + + +V YY +G + Y Q RD+ DQ Sbjct: 1166 AVDCQLKTLA---IRQQLDHQSDVALAYYQLGRIYQDWGKYDQTIIYYQKSRDLYQQLDQ 1222 Query: 153 -RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL------AAKEVEIGRYYLKRGE 205 + +++ N + R QL A+ ++GR Y G+ Sbjct: 1223 QKDVADSWYWLASCYRELGNYQQAVDCQLKTLAIRQQLDHQPKIASAYYQLGRIYQDWGK 1282 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAM---ARLVEAYVALALMDEARE 248 Y AI +Q Y + ++ L Y EA + Sbjct: 1283 YSDAIKSYQQSRELYQQLDLQKDVANQWYWLGNCYQESGNYQEAVD 1328 Score = 35.1 bits (80), Expect = 9.4, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 70/234 (29%), Gaps = 46/234 (19%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-----------SAFV 103 R Y+ ++ + A Y+ Q + L A Sbjct: 1425 RIANAYYQLGRIYRDWGKYEDAIAYYQQSRELYQ--------QLDLQKDVAHSWYWLAVC 1476 Query: 104 QYSAGKYQQAAS------LG------EEYITQ---YPESKNVDYVYYLVGMSYAQMIRDV 148 + KYQQA +++I + + D+ Y ++Y Q RD+ Sbjct: 1477 YRLSSKYQQALDCEIKNLAICQQLDDQQWIALAYGHRGTIYKDWGKYSEAITYYQQSRDL 1536 Query: 149 PYDQRATKLMLQYMSRIVERYTN-SPY--VKGARFYVTVGRNQL------AAKEVEIGRY 199 +++ S +V+ Y + Y + R QL A +GR Sbjct: 1537 YQQLGKEEIVATLWSGLVDCYRDWGKYQQALDCQLKTLAIRQQLDDQPRIALAYWSLGRI 1596 Query: 200 YLKRGEYVAAIPRFQLVLANYSDA---EHAEEAMARLVEAYVALALMDEAREVV 250 Y G+Y AI Q Y + ++ L + Y +A + Sbjct: 1597 YQNWGKYDQAIRYHQQSRDLYQQLDKQKDVADSWYWLADCYRNWGKYQQAVDYQ 1650 >gi|300709649|ref|YP_003735463.1| TPR repeat-containing protein [Halalkalicoccus jeotgali B3] gi|299123332|gb|ADJ13671.1| TPR repeat-containing protein [Halalkalicoccus jeotgali B3] Length = 245 Score = 38.6 bits (89), Expect = 0.89, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 20/58 (34%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K V + + +A + + + A + A+ + GK +QA E Sbjct: 105 NKGVAHAELGEYDEAIGAYREALAIAERSEHAAVAETNLAYALWETGKTEQALEHAER 162 >gi|253995883|ref|YP_003047947.1| hypothetical protein Mmol_0510 [Methylotenera mobilis JLW8] gi|253982562|gb|ACT47420.1| Tetratricopeptide TPR_2 repeat protein [Methylotenera mobilis JLW8] Length = 330 Score = 38.6 bits (89), Expect = 0.89, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 36/90 (40%), Gaps = 11/90 (12%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAG 108 + + + ++ K VL ++ +A + F + + FP ++L + G Sbjct: 57 AANPKNAQALFMKGVLLAEQGRRDEAIKSFTEVTERFPNLPEPYNNLAVL---YA--DQG 111 Query: 109 KYQQAASLGEEYITQYP----ESKNVDYVY 134 ++ +A E I +P +N+ +Y Sbjct: 112 QFDKARKALETAIKTHPSYATAHENLGDIY 141 >gi|166366085|ref|YP_001658358.1| methyl-accepting chemotaxis protein [Microcystis aeruginosa NIES-843] gi|166088458|dbj|BAG03166.1| methyl-accepting chemotaxis protein [Microcystis aeruginosa NIES-843] Length = 892 Score = 38.6 bits (89), Expect = 0.89, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 9/100 (9%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + ++Y KA + N A + +P A +L+ + +Y Sbjct: 1 MPSGTEYAKLYRKANTAYCQGNLEDAAVIVKEMISKYP--EDA-NVMLLQGHIHLGLQQY 57 Query: 111 QQAASLGEEYITQ---YPESKN-VDYVYYLVGMSYAQMIR 146 + A E+ + P S + VDY G+ + +R Sbjct: 58 RLAEERYEKVLQLAKNSPTSSDLVDYAQ--RGLDQIRQLR 95 >gi|88602067|ref|YP_502245.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] gi|88187529|gb|ABD40526.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] Length = 519 Score = 38.6 bits (89), Expect = 0.89, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 49/133 (36%), Gaps = 19/133 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGEE 119 + + VL + F +A E + + P A ++LL + + +A +L ++ Sbjct: 377 FNRGVLLHRAGRFLEAIESYQKVLNKNP----ADSRALLNKGRAHQALHETHKAITLFKQ 432 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I +PE+ + ++ +G Y ++R + +++ A Sbjct: 433 VIHIHPENSD---AWFYLGQIYTNLVR--------LAEAIVCFDQVLRIDPRH---VKAM 478 Query: 180 FYVTVGRNQLAAK 192 Y N+L K Sbjct: 479 IYKAKILNELGKK 491 >gi|26989357|ref|NP_744782.1| cellulose synthase subunit BcsC [Pseudomonas putida KT2440] gi|24984215|gb|AAN68246.1|AE016458_11 cellulose synthase operon C protein, putative [Pseudomonas putida KT2440] Length = 1172 Score = 38.6 bits (89), Expect = 0.89, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 40/120 (33%), Gaps = 14/120 (11%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 +A + + +P + R++L F + + A +L ++ P +++ Sbjct: 161 GQRPEAIRQLQRLDQQYPGSAGLRQTLAGWLFAEKRDRE---ALALLDQLARD-PGARDA 216 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 AQ D Q + ++RY SP + A + R LA Sbjct: 217 A----------AQREFDYLSGQAVSATSAAAWQAFLQRYPASPLLAQASETLQQQRKLLA 266 >gi|154489946|ref|ZP_02030207.1| hypothetical protein PARMER_00175 [Parabacteroides merdae ATCC 43184] gi|154089388|gb|EDN88432.1| hypothetical protein PARMER_00175 [Parabacteroides merdae ATCC 43184] Length = 1197 Score = 38.6 bits (89), Expect = 0.90, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 54/176 (30%), Gaps = 24/176 (13%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 A EE ++P+ ++ YY V Y +R L Y +++ Sbjct: 601 KLEDIPLATEAFEELERRFPKHSHLLESYYQV---YLMALRS-----GNQALAAAYKNKL 652 Query: 166 VERYTNSPYVKGAR--------FYVTVGRNQL--AAKEVEIGRYYLKRGEYVAAIPRFQL 215 V + S Y + ++ + A + + V ++ Sbjct: 653 VTTFPESDYAVAIADPNYEYNIRMMDKVQDSIYQATYASYLA------EDTVTVRRNYRD 706 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 V A Y A+ + M YV + + + + E+YP ++K Sbjct: 707 VSAKYPLADLLPKFMFLEALTYVQAGDAEGFKNALKALVEKYPTADVTELAGEMLK 762 >gi|153810402|ref|ZP_01963070.1| hypothetical protein RUMOBE_00783 [Ruminococcus obeum ATCC 29174] gi|149833581|gb|EDM88662.1| hypothetical protein RUMOBE_00783 [Ruminococcus obeum ATCC 29174] Length = 169 Score = 38.6 bits (89), Expect = 0.90, Method: Composition-based stats. Identities = 10/74 (13%), Positives = 23/74 (31%), Gaps = 1/74 (1%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ-REVYEKAVLFLKEQNFSKAYE 78 K I F + V + + + Q +E Y++A + + A + Sbjct: 3 KKIIAVIAFVLVVTGVPFCAIKGDEAARARAKEAAESQNKEWYKEANACIDAGEYEDAIK 62 Query: 79 YFNQCSRDFPFAGV 92 + D+ + Sbjct: 63 LLEKLPTDYEDSRY 76 >gi|117926995|ref|YP_867612.1| sulfotransferase [Magnetococcus sp. MC-1] gi|117610751|gb|ABK46206.1| sulfotransferase [Magnetococcus sp. MC-1] Length = 637 Score = 38.6 bits (89), Expect = 0.90, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 10/86 (11%) Query: 64 AVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + L++ ++A F Q + A + A ++G + +L EE + Sbjct: 213 GLARLEDGRVNEAIAAFKQGLEAE----PHAAFIQINLANALRASGDFAATQALFEEGVA 268 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDV 148 +PE ++L G++ D Sbjct: 269 HHPEHP-----FFLTGLAQMVRQSDP 289 >gi|329894579|ref|ZP_08270385.1| hypothetical protein IMCC3088_743 [gamma proteobacterium IMCC3088] gi|328922933|gb|EGG30261.1| hypothetical protein IMCC3088_743 [gamma proteobacterium IMCC3088] Length = 127 Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 14/102 (13%), Positives = 33/102 (32%), Gaps = 8/102 (7%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE-----VYEKAVLFLKEQNFSKAY 77 L +F +A C ++ +R L +V+ + ++ L + A Sbjct: 9 ILVLFTLLAACETPAPKQGDTRTPSLPQAVEVQRPLSPAYLRLLDEGQQQLNAGQIADAI 68 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 F + R + + + AG + + ++ E Sbjct: 69 ATFERAQRIHADNA---RVYVALSQAYSKAGDRRASVAMAER 107 >gi|307321312|ref|ZP_07600712.1| FecR protein [Sinorhizobium meliloti AK83] gi|306893040|gb|EFN23826.1| FecR protein [Sinorhizobium meliloti AK83] Length = 1197 Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 27/93 (29%), Gaps = 3/93 (3%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 ++ R++ D + + + ++ A E S P + + L Sbjct: 492 MAEAKREIDAALSVDPSFDVALVARGRYHMQNGEADNAVEDLLAGSTANP--AYS-NAQL 548 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 + A Y G AA + P V Sbjct: 549 LLAAAHYEKGDRIPAAQALDNADRLDPNDPVVA 581 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 13/102 (12%), Positives = 28/102 (27%), Gaps = 16/102 (15%) Query: 101 AFVQYS---AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 A Y + A + E + P S ++ + V + + Sbjct: 412 ARAHYRYHIDNDLEGALADLERALKTAPGSSSI-----------WNSLGLVQGARGDNRA 460 Query: 158 MLQYMSRIVERYTNSP--YVKGARFYVTVGRNQLAAKEVEIG 197 + + P + A Y+ R A +E++ Sbjct: 461 AEAAFKQAIALDPLDPVAHANLAIQYMDEMRMAEAKREIDAA 502 >gi|189424131|ref|YP_001951308.1| lytic transglycosylase catalytic [Geobacter lovleyi SZ] gi|189420390|gb|ACD94788.1| Lytic transglycosylase catalytic [Geobacter lovleyi SZ] Length = 698 Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 50/142 (35%), Gaps = 13/142 (9%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G E+ +R + L S + E A++ S A + + +DFP +G+ + Sbjct: 316 GGSEKALARLLTLASEKGALADDALLEAALINKHNGRHSDASQILQRLIKDFPSSGLIPR 375 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQMIRDVPYDQRA 154 + A+ QY AG + E + + K+ Y + + +D Q Sbjct: 376 AGWELAWGQYLAGNLP---AAAESFRLLF---KDT---LYRERALYWYARSQDR---QNR 423 Query: 155 TKLMLQYMSRIVERYTNSPYVK 176 + +++ Y Y Sbjct: 424 PADAERAYKQLLGEYPYGFYAA 445 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 40/109 (36%), Gaps = 17/109 (15%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q + R+++ + +S + A E+ G+Y G AA F+L+ Sbjct: 355 DASQILQRLIKDFPSSGLIPR------------AGWELAWGQY--LAGNLPAAAESFRLL 400 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 + D + E A+ + +A + YP G++A + Sbjct: 401 ---FKDTLYRERALYWYARSQDRQNRPADAERAYKQLLGEYPYGFYAAW 446 >gi|162451930|ref|YP_001614297.1| hypothetical protein sce3657 [Sorangium cellulosum 'So ce 56'] gi|161162512|emb|CAN93817.1| hypothetical protein sce3657 [Sorangium cellulosum 'So ce 56'] Length = 423 Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 1/83 (1%) Query: 190 AAKEVEIGRY-YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 A +GR + +R Y A F + L A+EA+ R++E ++ EARE Sbjct: 339 AKAAFHLGRMAFDQRRSYAEAERWFLVYLEEQPGGAFAQEALGRVIECRESMGPASEARE 398 Query: 249 VVSLIQERYPQGYWARYVETLVK 271 RYP G A + L++ Sbjct: 399 AARRYLARYPAGPHAAHARDLLE 421 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 28/65 (43%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 + +++++A +F + P A+++L + S G +A Y+ +YP Sbjct: 352 QRRSYAEAERWFLVYLEEQPGGAFAQEALGRVIECRESMGPASEAREAARRYLARYPAGP 411 Query: 129 NVDYV 133 + + Sbjct: 412 HAAHA 416 >gi|145493914|ref|XP_001432952.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124400067|emb|CAK65555.1| unnamed protein product [Paramecium tetraurelia] Length = 306 Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 7/78 (8%) Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 +K+Q + +A Y N + P + ++L + A+ Y + A + E+ + YP Sbjct: 18 TLIKDQKYREAINYLNYELQFCPKS----RALSLLAYCHYMNQDFTSAVGIYEQLVKYYP 73 Query: 126 ESKNVDYVYYLVGMSYAQ 143 + DY YL SY + Sbjct: 74 --EIDDYKIYL-AQSYYK 88 >gi|119497941|ref|XP_001265728.1| mitochondrial outer membrane translocase receptor (TOM70), putative [Neosartorya fischeri NRRL 181] gi|119413892|gb|EAW23831.1| mitochondrial outer membrane translocase receptor (TOM70), putative [Neosartorya fischeri NRRL 181] Length = 630 Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 20/141 (14%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92 +G + ++ D L + Y +A L F++A + + + R F F+ Sbjct: 390 LGNKDAAADDFELAITHNKDDPDIYYHRAQLHFILGEFAEAAKDYQKSIDLDRTFIFSH- 448 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + QY G A + + + ++V VY ++ DQ Sbjct: 449 -----IQLGVTQYKMGSVASAMATFRRSVKNF---EDVPDVY--------NYYGELLLDQ 492 Query: 153 RATKLMLQYMSRIVERYTNSP 173 + ++ + VE S Sbjct: 493 QNFSEAIEKFDKAVEMEKQSK 513 >gi|121710870|ref|XP_001273051.1| mitochondrial outer membrane translocase receptor (TOM70), putative [Aspergillus clavatus NRRL 1] gi|119401201|gb|EAW11625.1| mitochondrial outer membrane translocase receptor (TOM70), putative [Aspergillus clavatus NRRL 1] Length = 630 Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 20/141 (14%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92 +G + ++ D L + Y +A L F++A + + + R F F+ Sbjct: 390 LGNKDAAADDFELAITHNKDDPDIYYHRAQLHFILGEFAEAAKDYQKSIDLDRTFIFSH- 448 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + QY G A + + + ++V VY ++ DQ Sbjct: 449 -----IQLGVTQYKMGSVASAMATFRRSVKNF---EDVPDVY--------NYYGELLLDQ 492 Query: 153 RATKLMLQYMSRIVERYTNSP 173 + ++ + VE S Sbjct: 493 QNFSEAIEKFDKAVEMEKQSK 513 >gi|255013872|ref|ZP_05285998.1| hypothetical protein B2_08187 [Bacteroides sp. 2_1_7] Length = 255 Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 33/106 (31%), Gaps = 19/106 (17%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 +FF + +C + Q + ++A + +++++KA E + Sbjct: 10 VLFFLLTLCLIGSAYAQDTAL----------------KEAEVAYTKEDYAKAIELYEGIL 53 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + A Y AGK A E + P + Sbjct: 54 KSN--GESAA-VYYNLGNTYYKAGKIAPAILNYERCLLLDPGDSDA 96 >gi|170680722|ref|YP_001745805.1| cellulose synthase subunit BcsC [Escherichia coli SMS-3-5] gi|170518440|gb|ACB16618.1| cellulose synthase operon protein C, truncated [Escherichia coli SMS-3-5] Length = 1157 Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 75/237 (31%), Gaps = 38/237 (16%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + + +A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWGQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-------------VEI 196 Q + +V R S V + + A E + + Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRE-NGKEAEAEAMLRQQPPSTRIDLTL 609 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 610 ADWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYV--AAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWGQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|114562641|ref|YP_750154.1| hypothetical protein Sfri_1464 [Shewanella frigidimarina NCIMB 400] gi|114333934|gb|ABI71316.1| conserved hypothetical protein [Shewanella frigidimarina NCIMB 400] Length = 245 Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 22/124 (17%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 KY +A +I+ YP+S Y +G Q S + Sbjct: 135 KERKYDEAIPAFRSFISTYPDSNYAANANYWLGQLLYNKSEYND--------AKQAFSTV 186 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V ++ +S + + +A KE + A + VL Y+D+ Sbjct: 187 VSKFADSNKRGDSLVKL----GMIAEKENDSA----------GARALYNKVLKEYADSAS 232 Query: 226 AEEA 229 A A Sbjct: 233 ARLA 236 Score = 35.5 bits (81), Expect = 7.4, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 31/91 (34%), Gaps = 6/91 (6%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLF-LKEQNFSKAYEYFNQCSR 85 + L + V D+ T + YE AV LKE+ + +A F Sbjct: 92 IANLTAKSSTPAAPVQADATTVAAASSTLGETGSYEAAVNLVLKERKYDEAIPAFRSFIS 151 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +P + A + + Y+ +Y A Sbjct: 152 TYPDSNYAANANYWLGQLLYNKSEYNDAKQA 182 >gi|52346058|ref|NP_001005076.1| RNA polymerase-associated protein CTR9 homolog [Xenopus (Silurana) tropicalis] gi|82235822|sp|Q6DEU9|CTR9_XENTR RecName: Full=RNA polymerase-associated protein CTR9 homolog; AltName: Full=SH2 domain-binding protein 1 gi|49900213|gb|AAH76995.1| Ctr9, Paf1/RNA polymerase II complex component, homolog [Xenopus (Silurana) tropicalis] Length = 1172 Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 101/276 (36%), Gaps = 39/276 (14%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 A L RA E + ++T +++A + E S +Y + + + + Y Sbjct: 476 ASLDRAKAEAEHDEHYYNAISVTTTYNLARLYEGLCEFHESEKLYKNILREHPNYVDCYL 535 Query: 63 K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + + NF +A ++F + ++D P + L A ++ E Sbjct: 536 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 589 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSPY 174 + Q P ++N Y +G + Q + D+ R L +++ + + Y Sbjct: 590 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLY 648 Query: 175 VKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVL 217 + YV R+ A +E + + Y+++ +Y++A+ ++ L Sbjct: 649 AANGIGAVLAHKGYVREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCL 708 Query: 218 ANY---SDAEHAEEAMARLVEAYVALALMDEAREVV 250 + + E + L A + E ++++ Sbjct: 709 RKFYKHQNT----EVLLYLARALFKCGKLQECKQIL 740 >gi|24212980|ref|NP_710461.1| cAMP-binding protein [Leptospira interrogans serovar Lai str. 56601] gi|45656142|ref|YP_000228.1| cyclic nucleotide binding protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24193659|gb|AAN47479.1| cAMP-binding protein [Leptospira interrogans serovar Lai str. 56601] gi|45599375|gb|AAS68865.1| cyclic nucleotide binding protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 405 Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 16/47 (34%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 E+Y + ++N A F + + P A ++ L Sbjct: 129 EEDPNELYNIGENYFNQKNNHHAAYAFQKYLQYLPNGPFATQAKLKL 175 >gi|45655977|ref|YP_000063.1| histidine kinase sensor protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45599210|gb|AAS68700.1| histidine kinase sensor protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 1068 Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 52/173 (30%), Gaps = 32/173 (18%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +R+ +L T Y A K+ N +A + + + K Sbjct: 897 SSLNTDKTRNDFLKEETSDWSAS--YSHARQLYKDGNVKEAIDELAEL---YSKTPEDIK 951 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL------------------V 137 + + A + + Y +A + +Y+ +S+ +Y YYL Sbjct: 952 VIKLLALLSFKDKDYIKAVEVLGKYLEV--DSELSEYWYYLSIANKKLGKFSEAIYASEK 1009 Query: 138 GMS-------YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 ++ + D+ Q + +++++ + K + Sbjct: 1010 VLAKQPDNTNNLVNLSDLYRLQNEYTRAKEIAAQVLDLDPQNENAKKILRKIE 1062 >gi|13542035|ref|NP_111723.1| TPR repeat-containing protein [Thermoplasma volcanium GSS1] Length = 510 Score = 38.6 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 59/183 (32%), Gaps = 29/183 (15%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSAGKYQ 111 D + E E+A + N+++A E ++ P SL L+ A Y G Y Sbjct: 4 DEKTPDEYAEEARSDIAAGNYAEAIEKIDKAIDKEPRNP----SLHLIRADALYRQGNYS 59 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + + + L + Y M D + ++ + Y Sbjct: 60 SAIEELNFTEHMDKNNPEL---FSLKSICYGSM-GDFKRSKEEADKAIKA----DQSYPF 111 Query: 172 SPYVKGARFYVTVGRNQLAAKEV---------------EIGRYYLKRGEYVAAIPRFQLV 216 + Y + A + A K+ ++ Y ++ +Y A+ + V Sbjct: 112 AYYNRAAALRGLGDVDG-AEKDFRKYIEMQPSDPDPHYDLAEIYFEKKDYKKAMEEVKAV 170 Query: 217 LAN 219 L N Sbjct: 171 LRN 173 >gi|329851008|ref|ZP_08265765.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum C19] gi|328839854|gb|EGF89426.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum C19] Length = 804 Score = 38.6 bits (89), Expect = 0.92, Method: Composition-based stats. Identities = 13/108 (12%), Positives = 34/108 (31%), Gaps = 14/108 (12%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + +A F P K++ F + ++A + + Y+ Q Sbjct: 188 GRTRQQNGKSDQAVRDFRMALGLSPGN---LKAVSDLIFTLTRLNRTEEAHTALDRYLRQ 244 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 +P G+ ++ D+ T+ + + ++ + N Sbjct: 245 FPNEP---------GLLLSRA--DLLRRTGKTEEAIAAYNHLLPLHPN 281 >gi|225569426|ref|ZP_03778451.1| hypothetical protein CLOHYLEM_05510 [Clostridium hylemonae DSM 15053] gi|225161634|gb|EEG74253.1| hypothetical protein CLOHYLEM_05510 [Clostridium hylemonae DSM 15053] Length = 453 Score = 38.6 bits (89), Expect = 0.92, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 10/92 (10%) Query: 49 DSVTDVRYQ---REVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAF 102 D +T Y +Y + + N+ A + + G + L+ A Sbjct: 347 DEITGELYPKMCENLYSTSKNNFEVANYDTAISNLERVMQMDEGYSDGG----AKLLLAQ 402 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 G +A ++ I YP ++ Sbjct: 403 SYEKKGDQDKANIEYQKIIEDYPNTEAAASAQ 434 >gi|193211913|ref|YP_001997866.1| hypothetical protein Cpar_0239 [Chlorobaculum parvum NCIB 8327] gi|193085390|gb|ACF10666.1| conserved hypothetical protein [Chlorobaculum parvum NCIB 8327] Length = 692 Score = 38.6 bits (89), Expect = 0.92, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 13/97 (13%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + F LT+ F+ L ++Q S +YE+A +N+S+A +Y Sbjct: 6 FSFRLTLLFAFFTLSLAACDQQESE----------PKPSALYEEAQRLEGRKNYSEALDY 55 Query: 80 FN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 +N F+ A ++L +++ G+YQ A Sbjct: 56 YNRGLAADTLKGFSAEALEALCRKGRIEFLTGRYQAA 92 >gi|148654219|ref|YP_001274424.1| hypothetical protein RoseRS_0031 [Roseiflexus sp. RS-1] gi|148566329|gb|ABQ88474.1| TPR repeat-containing protein [Roseiflexus sp. RS-1] Length = 522 Score = 38.6 bits (89), Expect = 0.92, Method: Composition-based stats. Identities = 46/229 (20%), Positives = 83/229 (36%), Gaps = 39/229 (17%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLK-----EQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 D L++ + Q Y A + + + +AY+ +C++ P G + L Sbjct: 280 DEALEAYAQIPPQDRYYVDARIRISAILKLQNKMREAYDTLFECAKLHPTNG---QLFLN 336 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + Y K+ A E + P +YL+G Y M R+ L Sbjct: 337 MGKLLYDMNKHAGAVKAFERAVQLLPNDPQ---AHYLLGFMYNLMGRE--------GWAL 385 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQ--LAAKEVE-IGRY--------------YLK 202 + VE ++ ++ Y+ V RN+ LAAKE + ++ Y + Sbjct: 386 AAWRKAVELAPDAHSLRYDLGYMYVRRNRYDLAAKEFARVLQFWPDDVETNFMLGLCYKE 445 Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 E AIP F+ VL H +A+ L +Y+ + + + Sbjct: 446 LMEPARAIPLFEKVLRRNP--RHV-QALYYLGASYLQIGNTSLGKAYLR 491 >gi|86158329|ref|YP_465114.1| lytic transglycosylase [Anaeromyxobacter dehalogenans 2CP-C] gi|85774840|gb|ABC81677.1| Lytic transglycosylase [Anaeromyxobacter dehalogenans 2CP-C] Length = 750 Score = 38.6 bits (89), Expect = 0.92, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 45/171 (26%), Gaps = 28/171 (16%) Query: 27 FFSIAVCFLVGWERQSS----RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 + +A + +R + R + D ++ A L + +A E Sbjct: 310 LYLLAGASSISGDRDEAVALYRQLARDFAGHAFADDALFFAADLLARNGKPQEAREALAA 369 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG----------EEYITQYPESKNVDY 132 RD P ++ A++ AG A + + Y E Y Sbjct: 370 LVRDHPGGDYREEARFRLAWLLKQAGDLDGAVAQLLAVEEEQAGRDGY-----EHARAAY 424 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 + + + + + RY Y AR + Sbjct: 425 ---------WRARLLAARGEDGRRAAEAVFTDLASRYPTDYYGLLARARLD 466 >gi|227818845|ref|YP_002822816.1| adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii NGR234] gi|36959103|gb|AAQ87528.1| Putative adenylate cyclase 3 [Sinorhizobium fredii NGR234] gi|227337844|gb|ACP22063.1| probable adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii NGR234] Length = 769 Score = 38.6 bits (89), Expect = 0.92, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 48/142 (33%), Gaps = 19/142 (13%) Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN--VDYVYYLVGMSYA----QM 144 A + L++ G+Y +A + + + P + V L +A Q Sbjct: 459 AYAISAQLLA-----QQGRYDEAFAAIDRAMKLAPNDPDNHVSMARVLNATGHAAEAEQQ 513 Query: 145 IRDVPY-DQRATKLMLQYMSRIVERYTNSPY--VKGARFYVTVGR-NQLAAKEVEIGRY- 199 +R D K L+ ++ V ++ Y V + + A I Y Sbjct: 514 VRLAMRIDPHPPKATLRMLA--VSLFSQGKYNEAADTLERVIEKKSDLQADYATLISSYG 571 Query: 200 YL-KRGEYVAAIPRFQLVLANY 220 YL + A I R+ + ++ Sbjct: 572 YLGRTDGIQALINRYNKLATSF 593 >gi|307352488|ref|YP_003893539.1| tetratricopeptide repeat-containing protein [Methanoplanus petrolearius DSM 11571] gi|307155721|gb|ADN35101.1| Tetratricopeptide TPR_2 repeat protein [Methanoplanus petrolearius DSM 11571] Length = 1098 Score = 38.6 bits (89), Expect = 0.93, Method: Composition-based stats. Identities = 14/117 (11%), Positives = 34/117 (29%), Gaps = 23/117 (19%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE--------VYEKAVLFLKEQNFSKAYEY 79 F+ A V S + ++ D R + +Y+K V + + + + Sbjct: 978 FTQAGTGSVSSPVMESSEYDSVNIPDTRTPTKEQLDDPDYLYKKGVALARRGYYRASLKC 1037 Query: 80 FNQCSRD------FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 F++ F+ + G + +A + + P + Sbjct: 1038 FSRIETLTEDCSDAVFSK-------GIIYA--KNGYFNEALDCFDRVLKMNPSHEKA 1085 >gi|294827566|ref|NP_710251.2| hypothetical protein LA_0070 [Leptospira interrogans serovar Lai str. 56601] gi|293385409|gb|AAN47269.2| hypothetical protein LA_0070 [Leptospira interrogans serovar Lai str. 56601] Length = 987 Score = 38.6 bits (89), Expect = 0.93, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 52/173 (30%), Gaps = 32/173 (18%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +R+ +L T Y A K+ N +A + + + K Sbjct: 816 SSLNTDKTRNDFLKEETSDWSAS--YSHARQLYKDGNVKEAIDELAEL---YSKTPEDIK 870 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL------------------V 137 + + A + + Y +A + +Y+ +S+ +Y YYL Sbjct: 871 VIKLLALLSFKDKDYIKAVEVLGKYLEV--DSELSEYWYYLSIANKKLGKFSEAIYASEK 928 Query: 138 GMS-------YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 ++ + D+ Q + +++++ + K + Sbjct: 929 VLAKQPDNTNNLVNLSDLYRLQNEYTRAKEIAAQVLDLDPQNENAKKILRKIE 981 >gi|281203477|gb|EFA77677.1| Protein phosphatase 5 [Polysphondylium pallidum PN500] Length = 556 Score = 38.6 bits (89), Expect = 0.93, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 41/136 (30%), Gaps = 28/136 (20%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSL 97 S+ + S +++ L +SKA EY P A + +S Sbjct: 52 STLSAEERLKKSDEYKAKANKLFGDQKFDLAVDEYSKAIEY-------HPTAILYSNRS- 103 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRAT 155 F + + A ++ P YV YY +G + + Sbjct: 104 ----FSYFKKELFVSALDDAKKATELDPM-----YVKGYYRLGSANMAL--------GHY 146 Query: 156 KLMLQYMSRIVERYTN 171 + +V+++ N Sbjct: 147 QDAKINFQTVVKKFPN 162 >gi|262403350|ref|ZP_06079910.1| TPR domain protein in aerotolerance operon [Vibrio sp. RC586] gi|262350849|gb|EEY99982.1| TPR domain protein in aerotolerance operon [Vibrio sp. RC586] Length = 624 Score = 38.6 bits (89), Expect = 0.93, Method: Composition-based stats. Identities = 16/118 (13%), Positives = 37/118 (31%), Gaps = 7/118 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + A+ + + +S + D ++ E Y +A + + A Sbjct: 317 FRRGAIFSLLLVIGVGFPNQQAWASAWLNQDQQAMQAFKAEQYAQAAEKFSDPKWQGAAR 376 Query: 79 YFNQCSRDFPFAGVARKS------LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 Y+ + ++ + A AG +A L E+ + Q P ++ Sbjct: 377 YYAK-DYQGAVEAYSQIADPDLATQYNLANAYAQAGNLSKARELYEQVLEQEPNHQDA 433 >gi|311234485|gb|ADP87339.1| cell wall hydrolase/autolysin [Desulfovibrio vulgaris RCH1] Length = 568 Score = 38.6 bits (89), Expect = 0.93, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 8/97 (8%) Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 A + V + R LA + + + AA+ R++ V Y + A++A+ Sbjct: 80 APAALYRVALTREGLARRSMNPADF-------KAAVDRYEEVARRYPRSALADDALFAAA 132 Query: 235 E-AYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + L AR+++ +P+G A ++ Sbjct: 133 KLCMERLDDASAARKILERQLREFPKGDMADAARAML 169 >gi|255531961|ref|YP_003092333.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366] gi|255344945|gb|ACU04271.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366] Length = 631 Score = 38.6 bits (89), Expect = 0.93, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 42/138 (30%), Gaps = 44/138 (31%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K L F CF++ + + V+ + ++KA +L+ ++ +A Sbjct: 1 MKKVTLLFFL----CFIL--------QIARAQTSTVKKAQNSFDKAQEYLRNNDYDQAIP 48 Query: 79 YF-NQCSR----DFPFAGVA---------RKSLLMS-----------AFVQY-------S 106 F F +A ++ + A Y Sbjct: 49 LLQEAIKADPAFQFAFIQLADINRRQKLYEQAKINYTSAIALGGIPDARAYYGFAESQIY 108 Query: 107 AGKYQQAASLGEEYITQY 124 G Y A + + +I QY Sbjct: 109 TGDYANALNNIKLFIAQY 126 >gi|254445653|ref|ZP_05059129.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] gi|198259961|gb|EDY84269.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] Length = 900 Score = 38.6 bits (89), Expect = 0.93, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 39/135 (28%), Gaps = 22/135 (16%) Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + +E I++ E +D Y + + + R+ S Sbjct: 339 RATLDEMISRSVEHALLDQALYYRAVFKFLEGDFPG--------AEDDAAELQRRFPTST 390 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y R + + A R Y A R Q + + +SD A + Sbjct: 391 Y----RRGMLALQASSA----------WNRERYRTAASRLQQMRSEFSDLRSDFRLSALI 436 Query: 234 VEAYVALALMDEARE 248 + Y+ L RE Sbjct: 437 ADCYLRAGLRSSTRE 451 Score = 35.1 bits (80), Expect = 9.7, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 30/77 (38%), Gaps = 3/77 (3%) Query: 56 YQREVYEKAVLFLKEQN---FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 ++E A+ + +A + + + D+P + + ++ LM A + K+ Sbjct: 671 APVALFEAALNAEQRGQDTYLDEATKLLQRIASDYPDSDIVYRARLMQADLLRRLNKFGS 730 Query: 113 AASLGEEYITQYPESKN 129 A + YP+ + Sbjct: 731 AEQIYYRLEIDYPDRPD 747 >gi|153833361|ref|ZP_01986028.1| tetratricopeptide repeat family protein [Vibrio harveyi HY01] gi|148870370|gb|EDL69296.1| tetratricopeptide repeat family protein [Vibrio harveyi HY01] Length = 391 Score = 38.6 bits (89), Expect = 0.93, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 52/191 (27%), Gaps = 44/191 (23%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY--- 120 A ++ +A + F Q + P + L++ + ++++A + Sbjct: 114 AKDYMASGFLDRAEKIFEQLVEE-PDHRESALQQLVTIY--QQTREWEKAIHYANQLAKM 170 Query: 121 ------ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 I + + + T +Q+ + + Sbjct: 171 GKKRTRIRANIAH-------------FWCELAMLDQADGNTSKAIQHFKKALSEDPKCVR 217 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 A GR YL+ +Y I VL D + + + + Sbjct: 218 ASIAL-----------------GRVYLESEDYKHTIKYLTGVLE--QDKDFISDVLPTIA 258 Query: 235 EAYVALALMDE 245 E Y L DE Sbjct: 259 ECYHHLGQEDE 269 >gi|145490955|ref|XP_001431477.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124398582|emb|CAK64079.1| unnamed protein product [Paramecium tetraurelia] Length = 850 Score = 38.6 bits (89), Expect = 0.93, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 3/46 (6%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 S L AF +Y +A ++ I N+ YL G++Y Sbjct: 61 SQLSKAFGLLKKQQYNEAMETLDKLIE---AHPNLADAQYLKGLAY 103 >gi|89052976|ref|YP_508427.1| tetratricopeptide TPR_2 [Jannaschia sp. CCS1] gi|88862525|gb|ABD53402.1| Tetratricopeptide TPR_2 [Jannaschia sp. CCS1] Length = 566 Score = 38.6 bits (89), Expect = 0.93, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 46/153 (30%), Gaps = 28/153 (18%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR-------DFPFAGVARKSLLMSAFVQ 104 D+ + Y + +++ F A E + + F AR A Sbjct: 359 PDLASVQAAY--GDILRRDEQFEGAIEAYTAVLDLVDADQPRYWFIHYAR------AISY 410 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + + A + + PE N V +G S + R+ L + R Sbjct: 411 HQTDNWDPAEADFRRALELNPEQPN---VLNYLGYSLVEQRRNFD-------EALGMIQR 460 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 V S Y+ + +V +L E + Sbjct: 461 AVAARPESGYIIDSLGWVYY---RLGRFEEAVA 490 >gi|886951|emb|CAA88282.1| orf7 [Saccharomyces cerevisiae] Length = 1045 Score = 38.6 bits (89), Expect = 0.93, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 51/156 (32%), Gaps = 33/156 (21%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARK------------------------------SLL 98 + ++ KA + + + + PF A + L Sbjct: 676 SKHSYLKAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNEDVQL 735 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRAT 155 A +Y +A E + ++ K ++ L+G ++ V + Q+A Sbjct: 736 NLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKETSVNFYQKAL 795 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 + + V+ + S ++ +F + + Q+A Sbjct: 796 ENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAE 831 >gi|22297912|ref|NP_681159.1| putative glycosyltransferase [Thermosynechococcus elongatus BP-1] gi|22294090|dbj|BAC07921.1| tll0369 [Thermosynechococcus elongatus BP-1] Length = 365 Score = 38.6 bits (89), Expect = 0.93, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 50/176 (28%), Gaps = 19/176 (10%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY 61 ++ R + AY K A +A +R + D++ Q Y Sbjct: 184 ERIMRRHLEQHPEDAYLWSKLA---GVYLARGNWEQAQRCLEEGLKTDTLPPAIAQELYY 240 Query: 62 EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSL-LMSAFVQYSAGKYQQAASLGEE 119 ++ L+ + + A + P V + L A Q ++ A + + Sbjct: 241 QQGNLYAERGEWQAAIAAYEMALGT--PTPEVMHLATYLRLAEAQKQLKRWGHALATYDR 298 Query: 120 YITQYPESKNVDY----VYYLV------GMSYAQMIRDVPYDQRATKLMLQYMSRI 165 P + Y L G++ + + DQ + + Sbjct: 299 LQRLDPT-CALAYQNQGALLLRLGQVSAGLAKLRQAIALLRDQNPA-EAQRLTQEL 352 >gi|110636430|ref|YP_676637.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406] gi|110279111|gb|ABG57297.1| TPR repeat containing protein [Cytophaga hutchinsonii ATCC 33406] Length = 466 Score = 38.6 bits (89), Expect = 0.93, Method: Composition-based stats. Identities = 26/227 (11%), Positives = 75/227 (33%), Gaps = 43/227 (18%) Query: 46 VYLDSVTDVRYQREVYE---------KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96 + ++ + ++Y+ +A + ++ +F A E + A + Sbjct: 80 TQFEEALEILDRAQLYQPNDTDIQLLRANIMAQQDDFEGAIELLEEILTL---AEEKDEI 136 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + G ++++ + +E I + ++ Y +SY+ + D + Sbjct: 137 HYHMGVIYQDMGNFEESINHLKEAIMLNSQHEDAIYE-----LSYSLEVLD------RLE 185 Query: 157 LMLQYMSRIVERYTNSPYVK-----------------GARFYVTVGRNQLAAKEVEIGRY 199 + + +++E+ S + A +V ++ ++ IG Sbjct: 186 ESIDFFKQLIEKDPYSHFAWFCLGVSYFKQGKLDEALDAYEFVIAINDKYSSAYYNIGEC 245 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 Y+ + EY A+ + + + + Y L + +A Sbjct: 246 YVYKNEYEKAL---EYFFQTMDMEDKTADVFYNIGFCYEHLGMHPKA 289 >gi|311068734|ref|YP_003973657.1| putative nucleic acid binding enzyme [Bacillus atrophaeus 1942] gi|310869251|gb|ADP32726.1| putative nucleic acid binding enzyme [Bacillus atrophaeus 1942] Length = 413 Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 3/91 (3%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 V L+ S+ + + S ++ Q E Y A F+ + S A + PF Sbjct: 263 VLSLISLYIHLSKKILIPSGSEAE-QHETYAMAKWFMAHKEISLAIKQLESIQHQ-PF-E 319 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 ++L + + + Q+AASL E + Sbjct: 320 HTDRALYDLSMLYKKQDRLQEAASLWERLMR 350 >gi|310800154|gb|EFQ35047.1| import receptor [Glomerella graminicola M1.001] Length = 624 Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 51/157 (32%), Gaps = 22/157 (14%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92 +G +++ D + Y +A L + FS A + + + RDF F+ Sbjct: 387 LGAPEKAAEDFEKAMEHNSEDPDIYYHRAQLHFIKGEFSDAAKDYQKSIDLDRDFIFSH- 445 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + QY G + S I + E +V Y YY ++ DQ Sbjct: 446 -----IQLGVTQYKMGSIASSMSTFRRCIKNFKEVPDV-YNYY----------GELLLDQ 489 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + ++ ++ S A + + L Sbjct: 490 GNFQEAIEKFDSAIDM--ESKTKPMAMNVLPLINKAL 524 >gi|322420030|ref|YP_004199253.1| TPR repeat-containing protein [Geobacter sp. M18] gi|320126417|gb|ADW13977.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp. M18] Length = 572 Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats. Identities = 33/236 (13%), Positives = 69/236 (29%), Gaps = 43/236 (18%) Query: 23 ALTIFFSIAVCFLVGWERQSS-----RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 L + I+ C S + ++ +A L E + A Sbjct: 8 LLFLPLMISACATEQASVPSPLADLGVITAPTAPPGAGRNMSLFAQARLRAAEGDQEGAL 67 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 Q P + + +A + + ++A + + I P Sbjct: 68 LLLRQAMAADPSSAFLHNA---AAQIYLQQNRPEEALAECQAAIAIDPS----------- 113 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 +S + ++ + K +Q+ +++E V + I Sbjct: 114 ALSSELLCGNILMTLQREKEAMQHYKKVIELDPTKEEVY-----------------LHIA 156 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM--ARLVEAYVALALMDEAREVVS 251 YYLK EY A+ + ++ ++ A+ L + Y + L EA Sbjct: 157 IYYLKSFEYEQAVDTLKSLVKASPES-----ALGYYYLAKTYEQMRLPREALTYYK 207 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 78/234 (33%), Gaps = 47/234 (20%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + + Q +A +++ + P + L A + +Y+QA + + Sbjct: 122 GNILMTLQREKEAMQHYKKVIELDPT---KEEVYLHIAIYYLKSFEYEQAVDTLKSLVKA 178 Query: 124 YPESKNVDYVYYLV-----------GMSYAQMIRDVPYD--------------QRATKLM 158 PES + Y YYL ++Y + D+ D Q Sbjct: 179 SPES-ALGY-YYLAKTYEQMRLPREALTYYKKAVDLKPDFEQALIEMGISQETQGLIPDA 236 Query: 159 LQYMSRIVERYTNSPYVKG--ARFYVTVGR--NQLA------AKEVE----IGRYYLKRG 204 + ++E N+ V A+ Y+ R LA K +E IG +L+ Sbjct: 237 IDSYKDLLEINPNNANVIQHLAQLYIQQKRLDEALALLQQKGGKSLETSRKIGLLFLELE 296 Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 Y AI FQ +L DA+ L AY +D+A I P Sbjct: 297 RYDEAIKTFQDILKVEPDAQQVR---FYLASAYEEKEDVDQAIVEFRKISRESP 347 >gi|296125217|ref|YP_003632469.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] gi|296017033|gb|ADG70270.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] Length = 356 Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 14/113 (12%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D Y + Y + V + + + +A F + P + A+V+ Y++ Sbjct: 237 DNNYSKSYYNRGVSKVNLKLYDEAVNDFYKVIELEPQNF---NAYFRLAYVKLKLKMYEE 293 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 A ++YI S D VY+ G + ++ K ++ ++ Sbjct: 294 AIEYYDKYIDCNNVS---DDVYFNRGFAKYKLSD--------YKNAVKDFDKV 335 Score = 35.5 bits (81), Expect = 7.7, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 59/170 (34%), Gaps = 24/170 (14%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G + +D D Y + Y + + + ++ EYFN+ + Sbjct: 152 LGLYEDAIKDFNKVLELDKNYFKAYYNIGLSKYNLKMYDESIEYFNKALELDNNSAYTYN 211 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQ---YPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 V++ GKY++A ++ + Y +S YY G+S + Sbjct: 212 ---NIGIVKHDLGKYKEALEYFDKALELDNNYSKS------YYNRGVSKVNL-------- 254 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 + + +++E + A F + + +L E I YY K Sbjct: 255 KLYDEAVNDFYKVIELEPQN---FNAYFRLAYVKLKLKMYEEAI-EYYDK 300 >gi|239815180|ref|YP_002944090.1| hypothetical protein Vapar_2189 [Variovorax paradoxus S110] gi|239801757|gb|ACS18824.1| conserved hypothetical protein [Variovorax paradoxus S110] Length = 230 Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats. Identities = 7/61 (11%), Positives = 21/61 (34%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +Y++ + + + F A+++ L++A Y G + + + Sbjct: 55 AAALYDEVERSTQSGDVERIQRVLGDMKERFAGTAYAQQAGLLAAKALYEKGNAEASRAA 114 Query: 117 G 117 Sbjct: 115 L 115 >gi|218249734|ref|YP_002374735.1| tetratricopeptide repeat domain protein [Borrelia burgdorferi ZS7] gi|218164922|gb|ACK74983.1| tetratricopeptide repeat domain protein [Borrelia burgdorferi ZS7] Length = 1004 Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117 + ++ NF ++ EY N F A+K ++ + ++ K +++ Sbjct: 773 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 826 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175 + I P + +Y YL + + + S ++E+ S Y+ Sbjct: 827 NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 875 Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222 A+ Y G A +E +G Y K Y AI F+ + N Sbjct: 876 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 932 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259 EA L + + A++++ ++ P+ Sbjct: 933 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 970 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK++N+ A ++ P + + A +G QA S E+ Sbjct: 840 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 896 Query: 120 YI 121 I Sbjct: 897 II 898 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 12/124 (9%), Positives = 44/124 (35%), Gaps = 18/124 (14%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + ++ D + + + A + + KA + + + A++ + Sbjct: 624 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNAQEDHYKLGII 676 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 ++ KY+ + ++ I P+ K + G++ + ++ K ++ Sbjct: 677 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 725 Query: 164 RIVE 167 + ++ Sbjct: 726 KAIQ 729 >gi|226321528|ref|ZP_03797054.1| FF domain protein [Borrelia burgdorferi Bol26] gi|226232717|gb|EEH31470.1| FF domain protein [Borrelia burgdorferi Bol26] Length = 1119 Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 44/220 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLG 117 + ++ NF ++ EY N F A+K ++ + ++ K +++ Sbjct: 881 KAGIVSNNLGNFKQSEEYLNF------FNANAKKPNEIAIYNLSIAKFENNKLEESLETI 934 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYV 175 + I P + +Y YL + + + S ++E+ S Y+ Sbjct: 935 NKAIDLNP--EKSEY-LYLKASINLKK--------ENYQNAISLYSLVIEKNPENTSAYI 983 Query: 176 KGARFYVTVGRNQLAAKEVE-------------IGRYYLKRGEYVAAIPRFQLVLANYSD 222 A+ Y G A +E +G Y K Y AI F+ + N Sbjct: 984 NLAKAYEKSGNKSQAISTLEKIINKNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN--- 1040 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259 EA L + + A++++ ++ P+ Sbjct: 1041 --SDIEAKYNLATTLIEINDNTRAKDLLREYTKLKPNNPE 1078 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK++N+ A ++ P + + A +G QA S E+ Sbjct: 948 LYLKASINLKKENYQNAISLYSLVIEKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 1004 Query: 120 YI 121 I Sbjct: 1005 II 1006 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 12/124 (9%), Positives = 44/124 (35%), Gaps = 18/124 (14%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + ++ D + + + A + + KA + + + A++ + Sbjct: 732 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENAYEKIIKL----TNAQEDHYKLGII 784 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 ++ KY+ + ++ I P+ K + G++ + ++ K ++ Sbjct: 785 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 833 Query: 164 RIVE 167 + ++ Sbjct: 834 KAIQ 837 >gi|119513026|ref|ZP_01632083.1| Peptidase M48 [Nodularia spumigena CCY9414] gi|119462306|gb|EAW43286.1| Peptidase M48 [Nodularia spumigena CCY9414] Length = 470 Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 27/87 (31%), Gaps = 5/87 (5%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + L+ + +Y +A N + FP + K+ Q Sbjct: 116 KMLLEKQPEFVPAYALYAEASKKY--GNEKDVIPILEKGVATFPESVELNKA---LIKAQ 170 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVD 131 A +Y +A+ ++ YP S Sbjct: 171 EEAEQYLEASITARQFAIVYPNSPEAA 197 >gi|42526637|ref|NP_971735.1| TPR domain-containing protein [Treponema denticola ATCC 35405] gi|41816830|gb|AAS11616.1| TPR domain protein [Treponema denticola ATCC 35405] Length = 725 Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 72/218 (33%), Gaps = 44/218 (20%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLM 99 + ++ + + + + V FLK N + A F++ S P + K L Sbjct: 240 AKQNADAKTRAQMEEVDRLVSEGVNFLKNGNLNSALSSFSKASSKMPDSETSFTAKKYLD 299 Query: 100 SA-----FVQYS--AGKYQQAASLGEEYITQYPESKNVD----YVYYLVGMSYAQMIRDV 148 A + G ++A S + YI +S N D +Y+ I D Sbjct: 300 MASALNDYASAREGTGDAEKALSDADSYIK---KSVNADGQNARAHYV-----YSQIADA 351 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 Q+ ++ + + + N L E+ G+ Y RG Y Sbjct: 352 ---QKQPQVAFVELEKAQSLDPD---------------NYLYNYEL--GKKYYARGHYQK 391 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 A F+ + + + A L + L L +EA Sbjct: 392 AKTSFERSVKSNPK---FDNAFFNLGMSCRKLGLENEA 426 >gi|39995489|ref|NP_951440.1| putative lipoprotein [Geobacter sulfurreducens PCA] gi|39982252|gb|AAR33713.1| lipoprotein, putative [Geobacter sulfurreducens PCA] gi|298504489|gb|ADI83212.1| lipoprotein, putative [Geobacter sulfurreducens KN400] Length = 74 Score = 38.6 bits (89), Expect = 0.94, Method: Composition-based stats. Identities = 11/87 (12%), Positives = 28/87 (32%), Gaps = 17/87 (19%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K + ++ L + +E+Y+ A K+ N A + Sbjct: 1 MRKIT-VLALVASMLTLAACSGKG--------------VQELYDTAQFEEKQHNLEHATK 45 Query: 79 YFNQCSRDFPFAGVARKSL--LMSAFV 103 + + P + +A ++ L + Sbjct: 46 LYEEIVAKHPQSELAARAKERLEAIKA 72 >gi|316935712|ref|YP_004110694.1| TPR repeat-containing protein [Rhodopseudomonas palustris DX-1] gi|315603426|gb|ADU45961.1| TPR repeat-containing protein [Rhodopseudomonas palustris DX-1] Length = 220 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 35/123 (28%), Gaps = 18/123 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117 + ++ + + +NF A + + + P + R++ + Y Y + Sbjct: 103 LMARSKVAMDAKNFDVAVKLLDAVIKLKPDYVEGWNRRATI-----YYLQNDYMHSLEDI 157 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E+ + + P L G+ K L R + + V Sbjct: 158 EQVLAREPRHFGA-----LAGLGMIMQELGDD------KRALDAFRRALALNPHLDKVPD 206 Query: 178 ARF 180 Sbjct: 207 LVK 209 >gi|282879665|ref|ZP_06288396.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1] gi|281306613|gb|EFA98642.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1] Length = 221 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 25/199 (12%), Positives = 57/199 (28%), Gaps = 46/199 (23%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 FF + + G R + V + + A+ + + + + +A F+Q ++ Sbjct: 5 FFILLWLIVSGSICHQMRGIVPSPSPTVDDTERL-KMALAYFQSEKYQEALNLFHQLDKE 63 Query: 87 FP----FAGV------------------------------ARKSLLMSAFV--QYSAGKY 110 + + A +++ A + +Y Sbjct: 64 YQLNPRYRAYIGLCHYQLWNYAEACNYLDSVSSALHVLAPAEQAVYYYANAESHFLLKEY 123 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 Q++ + E ++ ++ D YY +G Y Q +Y S + Y Sbjct: 124 QESITYFEMFLNVCHANEKAD-AYYRLGFCYLY--------QHHWLTAYEYFSSALSYYR 174 Query: 171 NSPYVKGARFYVTVGRNQL 189 R + L Sbjct: 175 QFGVTPQKRQRLVQLPKML 193 >gi|34499516|ref|NP_903731.1| hypothetical protein CV_4061 [Chromobacterium violaceum ATCC 12472] gi|34105366|gb|AAQ61721.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 582 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 81/214 (37%), Gaps = 35/214 (16%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS----AGKYQQAASLGEEY 120 V L+ ++ ++A ++ + P + L A ++ +A S E Sbjct: 236 VDRLRRKDINEAADFLQRELARRP------DAGLELQIAYPRLLVGAKRFPEARSAFEAL 289 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +P++ ++ Y G+ QM D + LQ + +Y +V+ Sbjct: 290 LKTHPDNPDLLYA---TGLLAYQM-----RDLKTADDRLQ--RALARQYPEQDFVRYTLG 339 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRG---EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 + ++ A + G +Y + G +Y+ A R +L +EA++RL Sbjct: 340 QIAE-DDRDAER---AGNWYRQVGPGQQYLPAQSRL-AMLEAADG--RLDEALSRL---- 388 Query: 238 VALALMDEAREVVSLIQERYP-QGYWARYVETLV 270 L D+ + ++L+Q + + R L+ Sbjct: 389 SGLGGTDQEKVSLALLQSQLAREAKQPRRAYDLL 422 >gi|326432946|gb|EGD78516.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818] Length = 870 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 27/232 (11%), Positives = 60/232 (25%), Gaps = 59/232 (25%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 ++ + + +A ++ + P V Y G++ +A Sbjct: 529 NIGQVYAAKGEYDRAISFYKRSLQIRLDTLGSKHPDTATTHH---DMGHVYYRKGEHDRA 585 Query: 114 ASLGEEYITQY-----PESKNVD--YV----------YYLVGMSYAQMIRDVPYD----- 151 E+ + Y P+ + Y Y + Y Q + D Sbjct: 586 IECYEKGLQSYLDTLGPQHPHTATTYASLGQVHGVKGEYDRAIHYYQQCLQIRLDTLGEK 645 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFY-VTVGRNQLAAKE-------VEIGRYYLKR 203 +T M ++ + + + L K IG+ Y + Sbjct: 646 HPSTASTYNNMGQVYSGKGEHDRAIEYYQKSLQIALDTLGEKHPDTAATYNNIGQVYYAK 705 Query: 204 GEYVAAIPRFQLVL--------ANYSDAEHAEEAMARLVEAYVALALMDEAR 247 +Y A F+ + + D Y L + +++ Sbjct: 706 SQYDRATHYFEKSVEIKLDMFGEKHPDT----------ATTYSNLGAVHDSK 747 >gi|324502765|gb|ADY41215.1| Lysine-specific demethylase 6A [Ascaris suum] Length = 1057 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 33/113 (29%), Gaps = 28/113 (24%) Query: 98 LMSAFVQYSAGKYQQAASLG--------EEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 L V A + +A S + + + Y+ +G+ Y Sbjct: 74 LKLGHVNLLAKDFAKALSAYQKAYNLDADRFWR----DPS---AYFGLGLVYFHF----- 121 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ-----LAAKEVEIG 197 RA + + +R++ Y N P + LA K + I Sbjct: 122 ---RAFSIAAESFNRLLFTYPNLPISIEVHARLGFIYKNLEKFDLALKHLNIA 171 >gi|312886240|ref|ZP_07745854.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603] gi|311301265|gb|EFQ78320.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603] Length = 244 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 7/71 (9%), Positives = 19/71 (26%), Gaps = 3/71 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ K + + A + + + Y G+ A E+ Sbjct: 18 LFTKGNDQYAKAKYQDAVKTYQAILDK---GYQSAVVYFNMGNAYYKLGEIPSAVLYYEK 74 Query: 120 YITQYPESKNV 130 P +++ Sbjct: 75 AHKLAPGDEDI 85 >gi|260903512|ref|ZP_05911907.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AQ4037] gi|308107607|gb|EFO45147.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AQ4037] Length = 391 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 25/186 (13%), Positives = 58/186 (31%), Gaps = 34/186 (18%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A ++ +A + F Q + + A + L++ + ++++A + Sbjct: 114 AKDYMVSGFLDRAEKIFEQLVEEPDYKEAALQ-QLVTIY--QQTREWEKAIHYANQLAKM 170 Query: 124 -YPESK---NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 S+ N+ + + I + + +Q+ + + Sbjct: 171 GNQRSRMRTNIAH--------FWCEIAMLDQADGNSNKAIQHFKKALSEDPKCVRAS--- 219 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + +GR YL+ +Y I VL D + + + + E Y Sbjct: 220 --------------ISLGRIYLESEDYKQTIKYLTGVLE--QDKDFVSDVLPTIAECYHH 263 Query: 240 LALMDE 245 L DE Sbjct: 264 LGQEDE 269 >gi|254469914|ref|ZP_05083319.1| peptidase M48, Ste24p [Pseudovibrio sp. JE062] gi|211961749|gb|EEA96944.1| peptidase M48, Ste24p [Pseudovibrio sp. JE062] Length = 480 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 61/159 (38%), Gaps = 31/159 (19%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP----FAGVARKSLLMSAFVQYSAGKYQQAASL 116 Y +A+ ++ SKA + P F + ++LL GK + A + Sbjct: 308 YARAIASMRSDKVSKAVRKIDALIAKAPEYPYFYEIKGQALLE-------GGKPKAAIAP 360 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE--RYTNSPY 174 + + YP + + + + + +A + DQR K ++R ++ RY+ + Y Sbjct: 361 FRKALALYPGNPH-----FEIWLGFAMV---ASNDQRYLKEAKSILTRALQKDRYSMNGY 412 Query: 175 VK--GARFY--------VTVGRNQLAAKEVEIGRYYLKR 203 + A + ++ +A ++ + Y KR Sbjct: 413 AQLAIANARLGDVAGADLATAQSHMARGDIRSAQRYAKR 451 >gi|220917161|ref|YP_002492465.1| Lytic transglycosylase catalytic [Anaeromyxobacter dehalogenans 2CP-1] gi|219955015|gb|ACL65399.1| Lytic transglycosylase catalytic [Anaeromyxobacter dehalogenans 2CP-1] Length = 750 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 45/171 (26%), Gaps = 28/171 (16%) Query: 27 FFSIAVCFLVGWERQSS----RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 + +A + +R + R + D ++ A L + +A E Sbjct: 310 LYLLAGASSISGDRDEAVALYRQLARDFAGHAFADDALFFAADLLARAGKSQEAREALAA 369 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG----------EEYITQYPESKNVDY 132 RD P ++ A++ AG A + + Y E Y Sbjct: 370 LVRDHPGGDYREEARFRLAWLLKQAGDLDGAVAQLLAVEEEQAGRDGY-----EHARAAY 424 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 + + + + + RY Y AR + Sbjct: 425 ---------WRARLLAGRGEDGRRAAEAVFTELATRYPTDYYGLLARARLD 466 >gi|149919240|ref|ZP_01907723.1| hypothetical protein PPSIR1_02446 [Plesiocystis pacifica SIR-1] gi|149819954|gb|EDM79376.1| hypothetical protein PPSIR1_02446 [Plesiocystis pacifica SIR-1] Length = 289 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 4/71 (5%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 D RE Y + ++ +F A E F + + + + A G Y+ Sbjct: 47 ADAERAREAYVRGTQLYQDADFEAALEAFQEAATYYA----SPDFQFNIARCYERLGNYE 102 Query: 112 QAASLGEEYIT 122 +A E Y+ Sbjct: 103 EAIRHYEIYLR 113 >gi|154341282|ref|XP_001566594.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134063917|emb|CAM40108.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 873 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 22/169 (13%), Positives = 53/169 (31%), Gaps = 15/169 (8%) Query: 9 ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68 + + + + + + G +S L VR + Y + V + Sbjct: 31 LEEAAKSEHNVNELLSIHCLRATLAAMKGSMDVTSITAQLAPGEPVRLPVQSYLEGVAAM 90 Query: 69 KEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 + + A R F +L+ A V Y +Y+++ + + + S Sbjct: 91 ARGDLATARRRLETAVERCEGFGA----ALVCLAAVYYLTSQYEKSYAQYCYTLKMF-GS 145 Query: 128 KNVDYVYYL-VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 V + +G+ ++ R V + + R +E + + Sbjct: 146 DEAPSVVRVGMGLCAFRLQRLVD--------ARRILERAIEVHPDDELA 186 >gi|134045733|ref|YP_001097219.1| hypothetical protein MmarC5_0693 [Methanococcus maripaludis C5] gi|132663358|gb|ABO35004.1| Tetratricopeptide TPR_2 repeat protein [Methanococcus maripaludis C5] Length = 395 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 36/104 (34%), Gaps = 5/104 (4%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S+ + + ++++ K + + + KA E FN+ P + K Sbjct: 5 SIFETKEPKKLFGKGMEYYNRGKYQKAIELFNKTINSEPNNPH---AWYFKGHAYQMLDK 61 Query: 110 YQQAASLGEEYITQYPESKNV--DYVYYLVGMSYAQMIRDVPYD 151 + A E+ ++ P + +Y L + +V D Sbjct: 62 PKLAQDSYEKALSISPNDLEMVKNYAMLLNSLELFNESVEVLKD 105 >gi|119510448|ref|ZP_01629581.1| hypothetical protein N9414_01642 [Nodularia spumigena CCY9414] gi|119464870|gb|EAW45774.1| hypothetical protein N9414_01642 [Nodularia spumigena CCY9414] Length = 731 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 70/210 (33%), Gaps = 28/210 (13%) Query: 55 RYQREVYEKAV-LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 R +Y A + + + KA +NQ + FP A +LL + A Q+A Sbjct: 259 PTPRNLYRAARGIQIGGKEREKAIATYNQLVQKFPEASETGLALLRLSE---LARSRQEA 315 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + I +P + Y ++ + L Q ++ +Y +S Sbjct: 316 IPYLDRIIANFP--EQASRAIVEKAKIYQELNEQI--------LAQQAWELLLSQYGSS- 364 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 NQ A E + K Y A Q + N ++ A A + Sbjct: 365 -------------NQAAEYRWEKAKEQAKAQNYAGAWQWAQPIATNNPNSILAPRAGFWV 411 Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWA 263 + + L EA+ + ++P Y+A Sbjct: 412 GKWAIRLGKPQEAKAAYEYVLSQFPYSYYA 441 >gi|29839817|ref|NP_828923.1| type III secretion chaperone, putative [Chlamydophila caviae GPIC] gi|29834164|gb|AAP04801.1| type III secretion chaperone, putative [Chlamydophila caviae GPIC] Length = 335 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 39/112 (34%), Gaps = 14/112 (12%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + +Y KAV+ N +A P K+ + ++ ++ + Sbjct: 141 DPWNPQSMYNKAVVLTDMDNELEAIALLETTVSKNPL-YW--KAWIKLGYLLSRHKQWDK 197 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 A E + P ++ +Y +G+ Y + + T+L L+ Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQE 238 >gi|85708479|ref|ZP_01039545.1| hypothetical protein NAP1_04550 [Erythrobacter sp. NAP1] gi|85690013|gb|EAQ30016.1| hypothetical protein NAP1_04550 [Erythrobacter sp. NAP1] Length = 492 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 44/126 (34%), Gaps = 15/126 (11%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 +F + L S +++ E+ + A + + N S+A +Y+++ Sbjct: 4 LFAILGAIALSSCSG-DSETAASTAISGGPDFLELIDDARVSVNAGNLSEAGQYYDEARE 62 Query: 86 DFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 P + A +++ G++ A + + P+ + + Q Sbjct: 63 LEPENPGLW-----VEIARLRFRGGEHLTAIEAADYALELDPQYPS---ALLMRA----Q 110 Query: 144 MIRDVP 149 ++RD Sbjct: 111 LVRDAN 116 >gi|66805883|ref|XP_636663.1| hypothetical protein DDB_G0288595 [Dictyostelium discoideum AX4] gi|60465051|gb|EAL63157.1| hypothetical protein DDB_G0288595 [Dictyostelium discoideum AX4] Length = 407 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 I ++K E AI ++ +L+N D + ++ Y L D+ + +S+I+E Sbjct: 220 IAELFIKSNEIEKAIEIYENLLSN--DTTQLLRTLLGFIQCYTNLNEPDQVEKYLSIIKE 277 Query: 256 RYPQ 259 ++P Sbjct: 278 KFPN 281 >gi|186684583|ref|YP_001867779.1| signal transduction protein [Nostoc punctiforme PCC 73102] gi|186467035|gb|ACC82836.1| putative signal transduction protein with Nacht domain protein [Nostoc punctiforme PCC 73102] Length = 1815 Score = 38.6 bits (89), Expect = 0.95, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 74/222 (33%), Gaps = 38/222 (17%) Query: 71 QNFSKAYEYFNQCSRDFPF----AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP- 125 + +A YF Q + VA + A GKY+QA G++ + QY Sbjct: 1179 GKYEQAITYFQQSRDLYEQLGKEKDVANQC-YNLARCYREWGKYEQALECGQKCLAQYQK 1237 Query: 126 --ESKNVDYVYYLVG------------MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + ++ Y+ +G ++Y Q R++ K + R+ Y + Sbjct: 1238 LEDEPDIASAYFQLGSIHQAWGKYKQAIAYFQQSRNLYEQLGKEKNVADLWYRLASCYRD 1297 Query: 172 SPYVKGARFYVTVGRNQLAAKEV----EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 + A Y ++ + +++ I Y + G A +++ + + + Sbjct: 1298 WGKYQQAVEY--ELKDLASRQQLDDQTNIADGYNQLGRIYQAWGKYEQAIPYFQQSR--- 1352 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 E Y L L + Y W +Y + L Sbjct: 1353 -------ERYEQLGLEKNVASQWYNLAGCY--REWDKYEQAL 1385 >gi|324502148|gb|ADY40947.1| Lysine-specific demethylase 6A [Ascaris suum] Length = 1099 Score = 38.6 bits (89), Expect = 0.96, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 33/113 (29%), Gaps = 28/113 (24%) Query: 98 LMSAFVQYSAGKYQQAASLG--------EEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 L V A + +A S + + + Y+ +G+ Y Sbjct: 74 LKLGHVNLLAKDFAKALSAYQKAYNLDADRFWR----DPS---AYFGLGLVYFHF----- 121 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ-----LAAKEVEIG 197 RA + + +R++ Y N P + LA K + I Sbjct: 122 ---RAFSIAAESFNRLLFTYPNLPISIEVHARLGFIYKNLEKFDLALKHLNIA 171 >gi|322796271|gb|EFZ18847.1| hypothetical protein SINV_80216 [Solenopsis invicta] Length = 1022 Score = 38.6 bits (89), Expect = 0.96, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 51/141 (36%), Gaps = 24/141 (17%) Query: 133 VYYLVGM------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179 Y L+ + + Q +D ++R L +++ + + + Sbjct: 586 AYSLIALGNIWLQTLHQSGKDKEREKRHQDRALAMYKQVLRNDPKNIWASNGIGAVLAHK 645 Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 V R+ A +E + I Y+++ ++V+AI ++ L + H E Sbjct: 646 GCVNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHV-EV 704 Query: 230 MARLVEAYVALALMDEAREVV 250 + L AY + E++ + Sbjct: 705 LQYLGRAYFKAGKLKESKLTL 725 >gi|302038729|ref|YP_003799051.1| hypothetical protein NIDE3440 [Candidatus Nitrospira defluvii] gi|300606793|emb|CBK43126.1| conserved protein of unknown function, TPR-like [Candidatus Nitrospira defluvii] Length = 561 Score = 38.6 bits (89), Expect = 0.96, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 43/150 (28%), Gaps = 39/150 (26%) Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 L +QY +Y +A E P+ + ++G+S+ Q + Sbjct: 320 LHLGVLQYRTKQYAEAIQHLREASLLNPKQPE---AHIVLGLSHFQ--------VEQYEP 368 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 LQ + ++ A G Y K + RF V+ Sbjct: 369 SLQAFQEGIRHNPDN-----------------ADLHFNAGTAYDK-------LNRFDEVV 404 Query: 218 ANYSDA----EHAEEAMARLVEAYVALALM 243 + H +AM L +Y + Sbjct: 405 KSMQTTLALDPHHADAMNYLGYSYAERGVK 434 >gi|296127703|ref|YP_003634955.1| lytic transglycosylase catalytic [Brachyspira murdochii DSM 12563] gi|296019519|gb|ADG72756.1| Lytic transglycosylase catalytic [Brachyspira murdochii DSM 12563] Length = 752 Score = 38.6 bits (89), Expect = 0.96, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 40/112 (35%), Gaps = 8/112 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A + + + A + F++ + R L SA Y ++ L + Sbjct: 239 YYMARIKQQAGDREDAAKLFDEYLSNANNKTHRRLGLYYSADNYNRLKNYDKSIELYNTF 298 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + +YP V +Y +V ++ Y++ +++++ S Sbjct: 299 LKEYPRDDYVPRIY--------NNFVNVSLNRNNLVQAKTYLTNVMKKFPKS 342 >gi|254438730|ref|ZP_05052224.1| tetratricopeptide repeat domain protein [Octadecabacter antarcticus 307] gi|198254176|gb|EDY78490.1| tetratricopeptide repeat domain protein [Octadecabacter antarcticus 307] Length = 456 Score = 38.6 bits (89), Expect = 0.96, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 51/149 (34%), Gaps = 23/149 (15%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDY----VYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + AG++ A + Y+ +YP V + Y M +M R RA L Sbjct: 17 HRAGRHSDALEGYKRYLQRYPTDAGV-WTNLGSLY-RAMGRHEMGRTAQ--MRAYALAPN 72 Query: 161 YMSRIVERYTN-----SPYVKGARFYVTVGR---NQLAAKEVEIGRYYLKRGEYVAAIPR 212 ++ Y+N Y + + + L + IGR + G+Y AAI Sbjct: 73 D-KGVINNYSNILSDLGDYTGSIKLRKKSLKIDPSHLMHHAM-IGRCFRGMGDYGAAIKY 130 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALA 241 + + + RL A+ L Sbjct: 131 LTPMAKKFPEEPEI-----RLQLAFAQLG 154 >gi|75677027|ref|YP_319448.1| peptidase C14, caspase catalytic subunit p20 [Nitrobacter winogradskyi Nb-255] gi|74421897|gb|ABA06096.1| peptidase C14, caspase catalytic subunit p20 [Nitrobacter winogradskyi Nb-255] Length = 708 Score = 38.6 bits (89), Expect = 0.96, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 20/46 (43%), Gaps = 2/46 (4%) Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + +T + R ++RY +SP + + V +N A +E Sbjct: 335 FDRLKDSTDQA--ALKRFIKRYPDSPLALQVQHRLEVLQNAAAERE 378 >gi|330506492|ref|YP_004382920.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6] gi|328927300|gb|AEB67102.1| TPR-repeat protein [Methanosaeta concilii GP-6] Length = 172 Score = 38.6 bits (89), Expect = 0.97, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 51/151 (33%), Gaps = 18/151 (11%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + + K +K+ ++ A +N+ + P ++ + K Sbjct: 30 DPFEPDIPNQWVNKGHELVKKGSYKDAINCYNEALKLNPNLP---RAWCSKGYALIKLKK 86 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+++ + +E + P + + + G ++ + K L Y+ R +E Sbjct: 87 YKESHACLDEALRINPRHVS---CWTIKGWAFNCQNKH--------KDALVYLDRAIELD 135 Query: 170 TNSPYVKGARFYVTVGR--NQLAAKEVEIGR 198 + YV N+ A +V + + Sbjct: 136 PH--YVDAWYQKHLALNDLNRKAEADVALAK 164 >gi|307105375|gb|EFN53624.1| hypothetical protein CHLNCDRAFT_36304 [Chlorella variabilis] Length = 602 Score = 38.6 bits (89), Expect = 0.97, Method: Composition-based stats. Identities = 14/125 (11%), Positives = 36/125 (28%), Gaps = 20/125 (16%) Query: 62 EKAVLFLKEQNFSKAYEYF----NQCSRDFPFAGVARKSL--------LMSAFVQYSAGK 109 +K K +S+A + + D F+ +++ L A G Sbjct: 406 DKGNAAFKAGQYSRAVQRYNKAQEIIEFDEGFSAEDKQAAKAVKKSCSLNLAAAHLKLGN 465 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--QMIRDVPYDQR---ATKLMLQYMSR 164 +A ++ + + Y ++ + D R A Sbjct: 466 PVEARKAADKVLEADGSNPK---ALYRRAQAWLATADFTEAELDIRRGLAEDPASSDFKL 522 Query: 165 IVERY 169 +++++ Sbjct: 523 LLKKF 527 >gi|254446142|ref|ZP_05059618.1| protein kinase domain [Verrucomicrobiae bacterium DG1235] gi|198260450|gb|EDY84758.1| protein kinase domain [Verrucomicrobiae bacterium DG1235] Length = 725 Score = 38.6 bits (89), Expect = 0.97, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 16/90 (17%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE--AYVALALMDEAR---- 247 + + Y +R Y AA+ + L Y D +A ARLV A + DEA+ Sbjct: 623 MSLALYEYRRANYAAAVSYAKRCL-GYPDPNAPRDATARLVLAMASYQMGRTDEAQAAFF 681 Query: 248 EVVSLIQERYP---------QGYWARYVET 268 + +++ E++ QG+W +V Sbjct: 682 KARTVVNEKFQREIDLGNPVQGFWFDWVFA 711 >gi|254411394|ref|ZP_05025171.1| Methyl-accepting chemotaxis protein signaling domain [Microcoleus chthonoplastes PCC 7420] gi|196181895|gb|EDX76882.1| Methyl-accepting chemotaxis protein signaling domain [Microcoleus chthonoplastes PCC 7420] Length = 1041 Score = 38.6 bits (89), Expect = 0.97, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 7/110 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A + + +A + ++ ++P A LL Y +Y+QA E+ Sbjct: 11 YTHAQTAYAQGKYQEAADLISRLIEEYPDDPSAL--LLKGHICCYGLQQYEQAREHYEQV 68 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIR---DVPYDQRATKLMLQYMSRIVE 167 + E ++Y + G+ A + D +T+ I E Sbjct: 69 LNLTSEPDFIEYAH--KGLEDANQLSSEFDSVDSPPSTEDFDNNFHDIDE 116 >gi|146305154|ref|YP_001185619.1| hypothetical protein Pmen_0113 [Pseudomonas mendocina ymp] gi|145573355|gb|ABP82887.1| hypothetical protein Pmen_0113 [Pseudomonas mendocina ymp] Length = 349 Score = 38.6 bits (89), Expect = 0.97, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 3/52 (5%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + ++ +A E +R P VA L A ++ G+ +QA +Y Sbjct: 280 QAGHYPEAVELLQHITRRHPDRVVAN---LNLADAYWALGEREQAREAYGQY 328 >gi|67901400|ref|XP_680956.1| hypothetical protein AN7687.2 [Aspergillus nidulans FGSC A4] gi|40742683|gb|EAA61873.1| hypothetical protein AN7687.2 [Aspergillus nidulans FGSC A4] gi|259484029|tpe|CBF79904.1| TPA: mitochondrial outer membrane translocase receptor (TOM70), putative (AFU_orthologue; AFUA_2G01660) [Aspergillus nidulans FGSC A4] Length = 636 Score = 38.6 bits (89), Expect = 0.97, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 20/141 (14%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92 +G + + D L + Y +A L F++A + + + R F ++ Sbjct: 395 LGNKDAAQDDFELAITHNKDDPDIYYHRAQLHFILGEFAEAAKDYQKSIDLDRTFIYSH- 453 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + QY G A + + + ++V VY ++ DQ Sbjct: 454 -----IQLGVTQYKMGSVASAMATFRRSVKNF---EDVPDVY--------NYYGELLLDQ 497 Query: 153 RATKLMLQYMSRIVERYTNSP 173 + ++ + VE S Sbjct: 498 QNFSEAIEKFDKAVEMEKQSK 518 >gi|325297743|ref|YP_004257660.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides salanitronis DSM 18170] gi|324317296|gb|ADY35187.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides salanitronis DSM 18170] Length = 257 Score = 38.6 bits (89), Expect = 0.98, Method: Composition-based stats. Identities = 8/71 (11%), Positives = 18/71 (25%), Gaps = 7/71 (9%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEE 119 +A +E F+ A + + + Y +A E Sbjct: 32 AEADQAYQENKFADAIAAYETIL-----GTEGESADIYYNLGNCYYKTKNIAKAVLNYER 86 Query: 120 YITQYPESKNV 130 + P ++ Sbjct: 87 ALLLNPGDADI 97 >gi|307718491|ref|YP_003874023.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192] gi|306532216|gb|ADN01750.1| TPR domain protein [Spirochaeta thermophila DSM 6192] Length = 382 Score = 38.6 bits (89), Expect = 0.98, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 6/88 (6%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++ ++ LK+ +A F + A L+ G++ +A S Sbjct: 32 QLSQEGYALLKQDRPEEAIIRFEKILELDRHNNYA---LVGLGDAYRKKGEHDRAVSYYR 88 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIR 146 E + YP + Y + + Y R Sbjct: 89 ECLRYYPGNN---YALFGLADCYKAQER 113 >gi|301773824|ref|XP_002922327.1| PREDICTED: RNA polymerase II-associated protein 3-like [Ailuropoda melanoleuca] Length = 667 Score = 38.6 bits (89), Expect = 0.98, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 72/225 (32%), Gaps = 33/225 (14%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + + EK + K+ + +A E + + P+ V A + K+ Sbjct: 129 DSQKALALKEKGNKYFKQGKYDEAIECYTKGMDADPYNPVLPT---NRASAYFRLKKFAV 185 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYA--QMIRDVPYD-------QRATKLMLQYMS 163 A S I S Y G + Q + D D + + + Sbjct: 186 AESDCNLAIALN-RSYTKAYA--RRGAARFALQKLEDAKKDYEKVLELEPNNFEAMNELK 242 Query: 164 RIVERYT--NSPYVKGARFYVTVG-----------RNQLAAKEVEIGRYYLKRGEYVAAI 210 +I + + Y K A + Q A E ++G + K G+Y AI Sbjct: 243 KINQALPSKENSYPKEADTMIKSTEGEKKQIEEQQNKQQAISEKDLGNGFFKEGKYERAI 302 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE--VVSLI 253 + +A A + AY+ + +EA + +++ Sbjct: 303 ECYTRGIAA-DGTNALLPANRAM--AYLKIQKYEEAEKDCTQAIL 344 >gi|270340079|ref|ZP_06006964.2| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270332760|gb|EFA43546.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 260 Score = 38.6 bits (89), Expect = 0.98, Method: Composition-based stats. Identities = 8/70 (11%), Positives = 18/70 (25%), Gaps = 4/70 (5%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A + + ++ A + + + Y + A E Sbjct: 37 DADMAYRRGDYQHAIASYQNLLKQ----RKSADIYYNLGNAYYRSDSITMAILAYERASL 92 Query: 123 QYPESKNVDY 132 P K++ Y Sbjct: 93 LSPGDKDIRY 102 >gi|256425984|ref|YP_003126637.1| hypothetical protein Cpin_7035 [Chitinophaga pinensis DSM 2588] gi|256040892|gb|ACU64436.1| TPR repeat-containing protein [Chitinophaga pinensis DSM 2588] Length = 384 Score = 38.6 bits (89), Expect = 0.98, Method: Composition-based stats. Identities = 11/114 (9%), Positives = 34/114 (29%), Gaps = 22/114 (19%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAASLG 117 +A+ + +++ N+ + P + + +Y + A Sbjct: 32 NEAIELMDNGKLAESITLLNEARKLDPT-------QMDIVYELALAKYQQKDFNDAIKDL 84 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + I Q+ + V M+ +V D + + ++++ Sbjct: 85 KYLIKQHAANGRV-----------YAMLGNVQDDMGKPEKAIDTYDEGLKQFPK 127 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 3/66 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 VYE A+ ++++F+ A + + G + M VQ GK ++A +E Sbjct: 64 VYELALAKYQQKDFNDAIKDLKYLIKQHAANG---RVYAMLGNVQDDMGKPEKAIDTYDE 120 Query: 120 YITQYP 125 + Q+P Sbjct: 121 GLKQFP 126 >gi|170046777|ref|XP_001850926.1| serine/threonine-protein phosphatase 5 [Culex quinquefasciatus] gi|167869430|gb|EDS32813.1| serine/threonine-protein phosphatase 5 [Culex quinquefasciatus] Length = 506 Score = 38.6 bits (89), Expect = 0.98, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 44/147 (29%), Gaps = 33/147 (22%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQC-----SRDFPFAGVARKSLLMSAFV 103 D ++ +A K +++ A + + S + A +S F Sbjct: 29 EPADKERAEDLKNQANECFKNKDYENAVRLYTDALGVDGNSAIY----YANRS-----FA 79 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + A + + I P Y+ YY ++ + KL LQ Sbjct: 80 YLRQEAFGYALNDAVQAIKCNP-----AYLKGYYRRAGAHMAL--------GKFKLALQD 126 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQ 188 + + +R N A+ + + Sbjct: 127 LEFVAKRCPNDK---DAQMKYSECKKI 150 >gi|146184699|ref|XP_001029949.2| SLEI family protein [Tetrahymena thermophila] gi|146143045|gb|EAR82286.2| SLEI family protein [Tetrahymena thermophila SB210] Length = 2342 Score = 38.6 bits (89), Expect = 0.98, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 57/173 (32%), Gaps = 34/173 (19%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 ++A +Y+ + P K+ S ++A ++ I P+ Sbjct: 366 NEAIQYYQKALELNP--DY-YKAHYNSGLAYEKDNLIEEAIESYKKAIKINPK------- 415 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 +L + + D+ ++ ++ +IV+ NS Y Sbjct: 416 -FLKALI---RLGDICVEREMIDEGIECFKKIVQLSPNSEYDF----------------- 454 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +G YL + Y AI ++ L +A+ L AY + D+A Sbjct: 455 FSLGELYLTKKIYEEAIKCYKKTLEINPQ---YIKALNNLGLAYEYQQMFDQA 504 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 16/111 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 L+ +++ + KA E + + + K L + Y + + QA + + Sbjct: 558 NMGYLYSQQKMYDKAIECYQSALQVN----ENSLKILNNLGYAYYKSNMHDQAIEIYKRV 613 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 I P+S Y +G++Y +++ ++ E + Sbjct: 614 IQIDPKSFL---ANYNIGVAYQMK--------NMFDEAIEFYKKVEEIFPK 653 Score = 35.9 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 72/203 (35%), Gaps = 23/203 (11%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 +L ++ + +A EYFN+ P VA Y ++A + + P Sbjct: 1039 YLDKKEYQQAIEYFNKVIELDPKEVVALN---NIGLAYYDQKMNEKALEYYNKALEINPT 1095 Query: 127 SKNVDY----VY-----YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + Y VY Y + Y + + ++ + L ++ ++ + NS + Sbjct: 1096 FQQSIYNTGLVYEIQNQYEKALEYYNKVLKINPTEKKSLLRVEKINEKIGNI-NSEKPEE 1154 Query: 178 ARFYVTVGRNQL-AAKEVEIG--RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 +N L +AKE +Y + + +I Q + + EA +L Sbjct: 1155 TSKK--EVQNTLSSAKEYYSKGYDFYAQMED-EKSIQCLQKAIEIDPN---YYEAYDKLG 1208 Query: 235 EAYVALALMDEA-REVVSLIQER 256 Y + DEA + + ++ Sbjct: 1209 LIYGEKGMFDEAIQNYLKALEIN 1231 >gi|116329012|ref|YP_798732.1| cAMP-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330380|ref|YP_800098.1| cAMP-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116121756|gb|ABJ79799.1| cAMP-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124069|gb|ABJ75340.1| cAMP-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 405 Score = 38.6 bits (89), Expect = 0.98, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 16/47 (34%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 E+Y + ++N A F + + P A ++ L Sbjct: 129 EEDPNELYNIGENYFNQKNNHHAAYAFQKYLQYLPNGPFATQAKLKL 175 >gi|86609433|ref|YP_478195.1| TPR repeat-containing protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557975|gb|ABD02932.1| tetratricopeptide repeat protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 359 Score = 38.6 bits (89), Expect = 0.98, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 32/112 (28%), Gaps = 16/112 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +Y + L+ + +A + P L G Y AA E Sbjct: 145 LYVLGNVHLELGDLEQAIASLQKARALSPQDGA----VLYSLGSAYLRQGSYFAAAETLE 200 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + P++ N + +G +Y + R Q + ++ Sbjct: 201 RAVALQPDNPN---ARFQLGNAYLMLDR--------WDAARQEYEKTLQLDP 241 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 33/109 (30%), Gaps = 14/109 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +L++ ++ A E + P AR ++ A E+ Sbjct: 179 LYSLGSAYLRQGSYFAAAETLERAVALQPDNPNAR---FQLGNAYLMLDRWDAARQEYEK 235 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + P Y M+ + V Y+Q + R +E Sbjct: 236 TLQLDPA--------YWPAMNNMGL---VDYEQGDLDAAIDRWERTIEM 273 >gi|315917421|ref|ZP_07913661.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] gi|313691296|gb|EFS28131.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] Length = 145 Score = 38.6 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 8/76 (10%) Query: 70 EQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 ++++ A +F + A+V Y KY++A E+ + P S Sbjct: 11 KKDYDTAIYFFEKLMTLDATNGNWPGF----LAYVYYEQEKYKKAIPYFEKSVDLSPNSP 66 Query: 129 NVDYVYYLVGMSYAQM 144 + Y+L+G SY+++ Sbjct: 67 FI---YFLLGNSYSRL 79 >gi|294827634|ref|NP_710559.2| TPR-repeat-containing protein [Leptospira interrogans serovar Lai str. 56601] gi|293385477|gb|AAN47577.2| TPR-repeat-containing protein [Leptospira interrogans serovar Lai str. 56601] Length = 378 Score = 38.6 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 39/128 (30%), Gaps = 11/128 (8%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 EKA + + A + F + + ++L A + GK A + Sbjct: 236 EKARQLYVRKQYYGAIDTFKKALDMGVSSKAEEQALFYIAESYEAIGKSDSALQYLNRVL 295 Query: 122 TQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + ++D + G Y + + ++Y +SP + A Sbjct: 296 GN--QDGSLDQTALFRKGTIYFKS--------GKYEKAAALFQEATDKYPDSPVGRKASA 345 Query: 181 YVTVGRNQ 188 + +Q Sbjct: 346 WKKESLDQ 353 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV-SL 252 +E R R +Y AI F+ L ++ E+A+ + E+Y A+ D A + + + Sbjct: 235 LEKARQLYVRKQYYGAIDTFKKALDMGVSSKAEEQALFYIAESYEAIGKSDSALQYLNRV 294 Query: 253 IQ 254 + Sbjct: 295 LG 296 >gi|293372752|ref|ZP_06619133.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f] gi|292632261|gb|EFF50858.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f] Length = 735 Score = 38.6 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 9/62 (14%), Positives = 24/62 (38%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ ++ A +L ++ + +A E + + F G + + + KY +A Sbjct: 498 WEDVLFPIADFYLSKERWDEAIEIYEELETIGGFEGESAEYYQKFGYALQKRKKYAEAIQ 557 Query: 116 LG 117 Sbjct: 558 AY 559 >gi|237723273|ref|ZP_04553754.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229447795|gb|EEO53586.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 734 Score = 38.6 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 9/62 (14%), Positives = 24/62 (38%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ ++ A +L ++ + +A E + + F G + + + KY +A Sbjct: 497 WEDVLFPIADFYLSKERWDEAIEIYEELETIGGFEGESAEYYQKFGYALQKRKKYAEAIQ 556 Query: 116 LG 117 Sbjct: 557 AY 558 >gi|257062263|ref|YP_003142321.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802] gi|256592523|gb|ACV03373.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802] Length = 279 Score = 38.6 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 52/133 (39%), Gaps = 16/133 (12%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 +D +Y + + + + + K N+ KA E F + ++ P A + Sbjct: 114 KDFEKAIKIKPKYAQAFHGQGIAYTKLGNYEKALENFRKAIQNNP--QYAE-AFNGRGIA 170 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 KY+QA + ++ I Y G++Y Q Q ++ ++ + Sbjct: 171 YIQMEKYRQALNDFDKAIKFNSNYIE---AIYNKGIAYKQ--------QGNSEKAIEAFT 219 Query: 164 RIVERYTNSPYVK 176 ++++ +S Y++ Sbjct: 220 QVIQI--DSDYLE 230 Score = 35.5 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 41/113 (36%), Gaps = 16/113 (14%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 K++ + +A + F + + P A ++ G Y++A + I P+ Sbjct: 105 KQEKYEEAIKDFEKAIKIKP--KYA-QAFHGQGIAYTKLGNYEKALENFRKAIQNNPQ-- 159 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + G++Y QM + + L + ++ NS Y++ Sbjct: 160 -YAEAFNGRGIAYIQMEK--------YRQALNDFDKAIKF--NSNYIEAIYNK 201 >gi|160886408|ref|ZP_02067411.1| hypothetical protein BACOVA_04419 [Bacteroides ovatus ATCC 8483] gi|299146888|ref|ZP_07039956.1| putative TPR domain protein [Bacteroides sp. 3_1_23] gi|156108293|gb|EDO10038.1| hypothetical protein BACOVA_04419 [Bacteroides ovatus ATCC 8483] gi|298517379|gb|EFI41260.1| putative TPR domain protein [Bacteroides sp. 3_1_23] Length = 735 Score = 38.6 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 9/62 (14%), Positives = 24/62 (38%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ ++ A +L ++ + +A E + + F G + + + KY +A Sbjct: 498 WEDVLFPIADFYLSKERWDEAIEIYEELETIGGFEGESAEYYQKFGYALQKRKKYAEAIQ 557 Query: 116 LG 117 Sbjct: 558 AY 559 >gi|45656229|ref|YP_000315.1| hemolysin [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45599463|gb|AAS68952.1| hemolysin [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 378 Score = 38.6 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 39/128 (30%), Gaps = 11/128 (8%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 EKA + + A + F + + ++L A + GK A + Sbjct: 236 EKARQLYVRKQYYGAIDTFKKALDMGVSSKAEEQALFYIAESYEAIGKSDSALQYLNRVL 295 Query: 122 TQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + ++D + G Y + + ++Y +SP + A Sbjct: 296 GN--QDGSLDQTALFRKGTIYFKS--------GKYEKAAALFQEATDKYPDSPVGRKASA 345 Query: 181 YVTVGRNQ 188 + +Q Sbjct: 346 WKKESLDQ 353 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV-SL 252 +E R R +Y AI F+ L ++ E+A+ + E+Y A+ D A + + + Sbjct: 235 LEKARQLYVRKQYYGAIDTFKKALDMGVSSKAEEQALFYIAESYEAIGKSDSALQYLNRV 294 Query: 253 IQ 254 + Sbjct: 295 LG 296 >gi|34556854|ref|NP_906669.1| hypothetical protein WS0426 [Wolinella succinogenes DSM 1740] gi|34482569|emb|CAE09569.1| hypothetical protein WS0426 [Wolinella succinogenes] Length = 494 Score = 38.6 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 22/77 (28%), Gaps = 2/77 (2%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 + +Y + + Y A ++ F +A + + P A Sbjct: 345 AETLYRTILQESPSPEAQYNLANTLYRQNRFQEAITLYARIQTKNPDLLHAL--EHNQGN 402 Query: 103 VQYSAGKYQQAASLGEE 119 Y +Y+ A E Sbjct: 403 AHYHLKEYRLALEAYER 419 >gi|298482927|ref|ZP_07001109.1| TPR domain-containing protein [Bacteroides sp. D22] gi|298270899|gb|EFI12478.1| TPR domain-containing protein [Bacteroides sp. D22] Length = 735 Score = 38.6 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 9/62 (14%), Positives = 24/62 (38%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ ++ A +L ++ + +A E + + F G + + + KY +A Sbjct: 498 WEDVLFPIADFYLSKERWDEAIEIYEELETIGGFEGESAEYYQKFGYALQKRKKYAEAIQ 557 Query: 116 LG 117 Sbjct: 558 AY 559 >gi|259418089|ref|ZP_05742008.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B] gi|259346995|gb|EEW58809.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B] Length = 281 Score = 38.6 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 18/133 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ A+ L+ +N+ A + F +P + + K Q G ++A Y Sbjct: 162 YKLAMSDLEAENYQAAADRFANFKLAYPGSPLTAKVDFGLGKAQDGLGDTREA---ARSY 218 Query: 121 ITQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + + + +G + ++ T ++ + R+ N P V Sbjct: 219 LAAFTGDTAGAIAPEALFELGAALGRL--------GQTDQACITLAEVAVRFPNDPAVTA 270 Query: 178 ARFYVTVGRNQLA 190 A R++LA Sbjct: 271 AEAE----RSKLA 279 >gi|254429722|ref|ZP_05043429.1| LemA family [Alcanivorax sp. DG881] gi|196195891|gb|EDX90850.1| LemA family [Alcanivorax sp. DG881] Length = 209 Score = 38.6 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 34/86 (39%), Gaps = 11/86 (12%) Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--VEI 196 ++ + ++ QR LQ + + ERY + A ++QL E + + Sbjct: 100 LNNPEKLKQFEQAQRQLGSALQRLMVVAERYPD----LKANQNFLALQSQLEGTENRISV 155 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSD 222 R +Y+AA+ ++ + + Sbjct: 156 A-----RRDYIAAVQQYNTEIRTFPG 176 >gi|91216014|ref|ZP_01252983.1| polyprenyl synthetase [Psychroflexus torquis ATCC 700755] gi|91185991|gb|EAS72365.1| polyprenyl synthetase [Psychroflexus torquis ATCC 700755] Length = 325 Score = 38.6 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 9/62 (14%) Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 ++ +DYV + G+SYA Q K S I++RY +S Y + + Sbjct: 271 NEVIDYVKSVGGLSYA---------QIKMKEFQSEASEILQRYPDSTYKASLQLMIDYVI 321 Query: 187 NQ 188 ++ Sbjct: 322 DR 323 >gi|86606356|ref|YP_475119.1| TPR repeat-containing protein [Synechococcus sp. JA-3-3Ab] gi|86554898|gb|ABC99856.1| tetratricopeptide repeat protein [Synechococcus sp. JA-3-3Ab] Length = 312 Score = 38.6 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 10/87 (11%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y V +L++ ++ A E + P + AR ++ +A E+ Sbjct: 131 LYSLGVAYLRQGSYFAAAETLERAVALQPDSPNAR---FQLGNAYLMLDQWDRARQEYEK 187 Query: 120 YITQYPESKNVDY--VYYLVGMSYAQM 144 + P Y +G+ + Sbjct: 188 TLELDP-----AYWPAMNNIGLVDYEQ 209 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 14/111 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y ++L+ N ++A + + P G L G Y AA E Sbjct: 97 LYVLGNVYLELGNSAQAVQVLQRARALAPQDG---DVLYSLGVAYLRQGSYFAAAETLER 153 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + P+S N + +G +Y + + Q + +E Sbjct: 154 AVALQPDSPN---ARFQLGNAYLMLDQ--------WDRARQEYEKTLELDP 193 >gi|116620924|ref|YP_823080.1| hypothetical protein Acid_1805 [Candidatus Solibacter usitatus Ellin6076] gi|116224086|gb|ABJ82795.1| hypothetical protein Acid_1805 [Candidatus Solibacter usitatus Ellin6076] Length = 268 Score = 38.6 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 68/238 (28%), Gaps = 24/238 (10%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK--EQNFSKA 76 + + +T ++ L Q+ + + E A+ L+ + N Sbjct: 1 MKRIIITGILALC-AGLTCLMAQAPAGAPKGPAPKSKAEME----ALQALQAAQGNPDAT 55 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 F +L M A + E + P++ + Sbjct: 56 IAACENLITKFADTDFKGIALFMEADAYERKNDPEHMVIFAERALDANPQNFQ---AVLM 112 Query: 137 VGMSYAQMIRDVPYDQRA-TKLMLQYMSRIVER-----YTNSPYVKGARFYVTVGRNQLA 190 + Y+ R+ D+ +Y ++++ N + V ++ A Sbjct: 113 LAKYYSTHTRENDLDREEKLGKEEKYAHQVIDMMKDAPKPNPQLTDE--QWSDVKKDIAA 170 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA--MARLVEAYVALALMDEA 246 IG L R +Y A F+ + D E M R A A DEA Sbjct: 171 EAYNAIGLGNLTRKKYDVAAGNFKQAM----DTNSRPEPAYMVRYASALQAGGKNDEA 224 >gi|330928044|ref|XP_003302103.1| hypothetical protein PTT_13802 [Pyrenophora teres f. teres 0-1] gi|311322715|gb|EFQ89794.1| hypothetical protein PTT_13802 [Pyrenophora teres f. teres 0-1] Length = 877 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 22/139 (15%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108 +D + Y ++ +Q + KAYE + Q P + Y Sbjct: 294 SDQTDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 347 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y+ A I P N+ V+Y +G + + + D L R + Sbjct: 348 QYRDALDAYSRAIRLNP---NISEVWYDLG-TLYESCNNQTAD------ALDAYQRAADL 397 Query: 169 YTNSPYVKGARFYVTVGRN 187 ++ ++ + + + +N Sbjct: 398 DPSNIHI---KARLQLLQN 413 >gi|306838683|ref|ZP_07471519.1| TPR domain-containing protein [Brucella sp. NF 2653] gi|306406326|gb|EFM62569.1| TPR domain-containing protein [Brucella sp. NF 2653] Length = 283 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 48/160 (30%), Gaps = 33/160 (20%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ--------------REVYE-KAVLFL 68 L I ++ + G + +S +D E Y + + Sbjct: 20 LIIAVALLALTVAGCQSTNSTLSTVDRAQGSSENISSLTSVIQSNPRDPEGYNVRGSAYG 79 Query: 69 KEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 K + +A F+Q P + A ++L+ Y G +A I P+ Sbjct: 80 KAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR----YM-GDNNKAVQDYSRAIQLNPQ 134 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 D Y G Y Q R DQ L ++ + Sbjct: 135 ---YDAAYIGRGNVYRQAGR---LDQ-----ALNNFNQAI 163 >gi|253996449|ref|YP_003048513.1| type II and III secretion system protein [Methylotenera mobilis JLW8] gi|253983128|gb|ACT47986.1| type II and III secretion system protein [Methylotenera mobilis JLW8] Length = 659 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 40/134 (29%), Gaps = 20/134 (14%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + K + G+ S+ + YE A L + + Sbjct: 2 NIKKLTSYLVVMTFATSCTGFNHLKSKSDD---------DNQTYEAARLLINSGDVDAGI 52 Query: 78 EYFNQCSRDFPFAG------VARK-----SLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 + Q +P ++ +LL A Q G + A S ++ + P Sbjct: 53 DKLKQLVTLYPDNPQYRSMLKVQQELQLSTLLKLADNQAQQGLFTDAESNYKKVLMLDPN 112 Query: 127 SKNVDYVYYLVGMS 140 ++ Y +G++ Sbjct: 113 NQRAQEGSYRLGLA 126 >gi|238025842|ref|YP_002910073.1| TPR domain-containing protein [Burkholderia glumae BGR1] gi|237875036|gb|ACR27369.1| TPR domain protein [Burkholderia glumae BGR1] Length = 790 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 20/54 (37%), Gaps = 3/54 (5%) Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + ++ A ++ + +P + A KSL + G+Y AA Sbjct: 187 ALYNKGRYADAVKHARTMTERYPGSAYAWKSLSN---ALHKHGEYLAAAEPLAR 237 >gi|254166562|ref|ZP_04873416.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469] gi|289596148|ref|YP_003482844.1| TPR repeat-containing protein [Aciduliprofundum boonei T469] gi|197624172|gb|EDY36733.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469] gi|289533935|gb|ADD08282.1| TPR repeat-containing protein [Aciduliprofundum boonei T469] Length = 1297 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 27/190 (14%), Positives = 60/190 (31%), Gaps = 35/190 (18%) Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 L A Y +Y A E + +++ D + L+GM Y ++ + Sbjct: 486 LDLARAYYIVSRYDDAKKTLERGLKL---NEDSDEGWNLLGMIYYKL--------GDLEN 534 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY--------------LKR 203 + N+ + +L + YY ++ Sbjct: 535 ARYSFEKASTINPNNKKYW---KNLAWVMEKLGKYNEAV-EYYEKALKLDPNDMRLWYEK 590 Query: 204 GEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVV-SLIQERYP 258 G + I R++ + ++ A +A+ ++ + L DEA ++ SLI+ Sbjct: 591 GICLKKIKRYEEAIKSFDSALKLNSEFTKALYEKGDSLIKLGNYDEALKIFTSLIKLERG 650 Query: 259 QGYW-ARYVE 267 + + Sbjct: 651 NSEYIYKRAY 660 >gi|58583105|ref|YP_202121.1| hypothetical protein XOO3482 [Xanthomonas oryzae pv. oryzae KACC10331] gi|58427699|gb|AAW76736.1| unknown protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 204 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 32/108 (29%), Gaps = 13/108 (12%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 +F + + LVG + S +A + +A + F R Sbjct: 14 MFALVLLSALVGCASAPKKAPPPSSFDATM------SRAEAEVTNGGPEQALKTFEDAGR 67 Query: 86 DFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 P R + L Q+ Y +A +E + + P D Sbjct: 68 ADPTRKEPWVRIAQL-----QFDRANYARAIVAAQEVLQRDPNDLVAD 110 >gi|19115532|ref|NP_594620.1| RNA polymerase II associated Paf1 complex subunit Tpr1 [Schizosaccharomyces pombe 972h-] gi|26400735|sp|O42668|TPR1_SCHPO RecName: Full=Tetratricopeptide repeat protein 1 gi|2664248|emb|CAA15833.1| RNA polymerase II associated Paf1 complex subunit Tpr1 [Schizosaccharomyces pombe] Length = 1039 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 57/188 (30%), Gaps = 27/188 (14%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 KA + + N+ A + + + P + ++ A S Sbjct: 181 KARILYAKGNYRSALKLYQRALVSNP--QFKPDPRIGIGLCFWNLDMKTDALSAWTRVQQ 238 Query: 123 QYPESKNVD-YVYYLVGMSYAQM-IRDVPYDQ--RATKLMLQYMSRIVERYTNSPYVKGA 178 P++ VD Y +G+ Y + ++V D + LQ++ R + N P Sbjct: 239 LDPKNTVVDTY----IGLYYYDLAFQNVNNDSFVQNYGKALQHIQRAFKTRNNDPVASSI 294 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 Y + Y I + V+ N + + + AY Sbjct: 295 LER-----------------YVYSKKNYEGCIKLAENVIQNSFSSSLIADGYYWMGRAYH 337 Query: 239 ALALMDEA 246 + ++A Sbjct: 338 QMGNNEKA 345 >gi|189347525|ref|YP_001944054.1| hypothetical protein Clim_2046 [Chlorobium limicola DSM 245] gi|189341672|gb|ACD91075.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium limicola DSM 245] Length = 208 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 14/116 (12%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D ++ + + N+ +A YF + P + V +Y + Sbjct: 82 DPEKEQLLAALGAASFNQGNYREALVYFTKYQALAPDDSLRN---YDIGNVLLQMREYDK 138 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 A + I S + D YY +G+ YA+ R + +V++ Sbjct: 139 AIAAYRRAIE---NSVSFDEAYYNLGVCYARTGR--------AAEAEEIYELLVKK 183 >gi|85101921|ref|XP_961236.1| mitochondrial precursor protein import receptor tom70 [Neurospora crassa OR74A] gi|11595524|emb|CAC18318.1| mitochondrial precursor protein import receptor tom70 [Neurospora crassa] gi|28922778|gb|EAA32000.1| mitochondrial precursor protein import receptor tom70 [Neurospora crassa OR74A] Length = 624 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 45/134 (33%), Gaps = 20/134 (14%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92 +G ++ D + Y +A L + F++A + + + DF F+ Sbjct: 387 LGHPDKAEEDFNKAIEQNAEDPDIYYHRAQLHFIKGEFAEAAKDYQKSIDLDSDFIFSH- 445 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + QY G + + + + ++ +V Y YY ++ DQ Sbjct: 446 -----IQLGVTQYKMGSIASSMATFRRCMKNFDQTPDV-YNYY----------GELLLDQ 489 Query: 153 RATKLMLQYMSRIV 166 + ++ + Sbjct: 490 NKFQEAIEKFDTAI 503 >gi|320156059|ref|YP_004188438.1| flp pilus assembly protein TadD, contains TPR repeat [Vibrio vulnificus MO6-24/O] gi|319931371|gb|ADV86235.1| flp pilus assembly protein TadD, contains TPR repeat [Vibrio vulnificus MO6-24/O] Length = 246 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 50/177 (28%), Gaps = 37/177 (20%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 KFA + S+ LVG +S+ + A + + A + Sbjct: 2 KFASKLILSVVSILLVGCAAPASQ----------PSAESLNSLADTAFEYARYDSAKSKY 51 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE-------------YI----TQ 123 Q +P AR LM A + + A S ++ +I Sbjct: 52 QQVLDVYPEQPHAR---LMLARIDLLQDRPHAAQSQLQQLLTENADNAAEAAFILGRYQL 108 Query: 124 YPESKNVDYVYYLVGMSYAQMIRD------VPYD-QRATKLMLQYMSRIVERYTNSP 173 Y G+ + + D Q+ T Q+ R +E +S Sbjct: 109 NQGDALSASNYLQQGLVLDEQHAGLHNLLAIALDEQQRTAQAKQHFLRAMELEPDSK 165 >gi|317418580|emb|CBN80618.1| Prolyl 3-hydroxylase 1 [Dicentrarchus labrax] Length = 886 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/155 (12%), Positives = 45/155 (29%), Gaps = 34/155 (21%) Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + K +A + + P+ + + Y +M+ V + Sbjct: 151 AYFKINKLDKAVAAAHTFYQANPDHMEM-----RQNLEYYRMMAGVK---------EEDF 196 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + R +A E +G+ Y + A F++ + Y Sbjct: 197 KDL------------------EARTHMA--EFLLGKSYYSDDSFGLAAKHFEVAVDEYFT 236 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 A+ A+ Y M+ + ++ + + Y Sbjct: 237 ADKECRALCEGAYNYDGYNYMEYSADLFQAMTDHY 271 >gi|262164787|ref|ZP_06032525.1| TPR domain protein in aerotolerance operon [Vibrio mimicus VM223] gi|262027167|gb|EEY45834.1| TPR domain protein in aerotolerance operon [Vibrio mimicus VM223] Length = 620 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 39/123 (31%), Gaps = 7/123 (5%) Query: 14 AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73 A + + AL + L +S + D ++ + Y +A + + Sbjct: 312 AALFMFRRGALFTVVLLIGASLPNQHAWASPWLNQDQQAMRDFESKQYSQAAEGFSDPRW 371 Query: 74 SKAYEYFNQCSRDFPFAGVAR------KSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 A Y N ++ + A AG +A +L E+ + + P Sbjct: 372 QGAARY-NAGDYQGAIDAYSQVDNPDLDTQYNLANAYAQAGDLSKARNLYEQVLEKEPNH 430 Query: 128 KNV 130 ++ Sbjct: 431 QDA 433 >gi|260173462|ref|ZP_05759874.1| hypothetical protein BacD2_16440 [Bacteroides sp. D2] gi|315921732|ref|ZP_07917972.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695607|gb|EFS32442.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 735 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 9/62 (14%), Positives = 24/62 (38%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ ++ A +L ++ + +A E + + F G + + + KY +A Sbjct: 498 WEDVLFPIADFYLSKERWDEAIEIYEELETIGGFEGESAEYYQKFGYALQKRKKYAEAIQ 557 Query: 116 LG 117 Sbjct: 558 AY 559 >gi|255321355|ref|ZP_05362515.1| tetratricopeptide repeat domain protein [Campylobacter showae RM3277] gi|255301508|gb|EET80765.1| tetratricopeptide repeat domain protein [Campylobacter showae RM3277] Length = 790 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 V+D Y +Y +L+++ S A + + P + + + L A Y++G+ Sbjct: 250 VSDENYPEVLYLVTKAYLRQELVSDANYTLDILKSEHPNSNFTKLAELEFADKLYASGRQ 309 Query: 111 QQAASLGE 118 +A + E Sbjct: 310 DEAVRMYE 317 >gi|241829150|ref|XP_002414745.1| conserved hypothetical protein [Ixodes scapularis] gi|215508957|gb|EEC18410.1| conserved hypothetical protein [Ixodes scapularis] Length = 1100 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 54/145 (37%), Gaps = 22/145 (15%) Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + A KS L + + AG + +A + + + P +NV+ G +A Sbjct: 321 SKWAYKS-LKDGVMHFKAGNHSEAFACLNKALQIDP--ENVE-ALVARGALFANN----- 371 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 + L+ + + N P AR Y++ L G+YY +RG+ A Sbjct: 372 ---SNLRRALEDFEQALTLNPNHP---NARKYMSETLVAL-------GKYYEERGDLEGA 418 Query: 210 IPRFQLVLANYSDAEHAEEAMARLV 234 + ++ + A EA+ + Sbjct: 419 VKTYKKAVKVNLSNSDAREALIAME 443 >gi|189200310|ref|XP_001936492.1| TPR repeat-containing protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983591|gb|EDU49079.1| TPR repeat-containing protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 870 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 22/139 (15%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108 +D + Y ++ +Q + KAYE + Q P + Y Sbjct: 294 SDQTDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 347 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y+ A I P N+ V+Y +G + + + D L R + Sbjct: 348 QYRDALDAYSRAIRLNP---NISEVWYDLG-TLYESCNNQTAD------ALDAYQRAADL 397 Query: 169 YTNSPYVKGARFYVTVGRN 187 ++ ++ + + + +N Sbjct: 398 DPSNIHI---KARLQLLQN 413 >gi|197117091|ref|YP_002137518.1| LysM domain-containing protein [Geobacter bemidjiensis Bem] gi|197086451|gb|ACH37722.1| LysM domain protein [Geobacter bemidjiensis Bem] Length = 200 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 23/53 (43%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + E + +A ++N+ +A E F+ + FP +G A + L A Sbjct: 142 PAQAGETESFHQARKAYLDRNYQRALELFSGFLKKFPRSGYAADASLYRADCY 194 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 17/50 (34%), Gaps = 1/50 (2%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 R D R + L+ S ++++ S Y A Y L+ Sbjct: 151 FHQARKAYLD-RNYQRALELFSGFLKKFPRSGYAADASLYRADCYLHLSG 199 >gi|83594427|ref|YP_428179.1| hypothetical protein Rru_A3097 [Rhodospirillum rubrum ATCC 11170] gi|83577341|gb|ABC23892.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170] Length = 933 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 8/132 (6%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + G + + + + + +A L + + A F+Q + P + Sbjct: 181 TMAGHQDAARALLARAAAAAPDDVDVLVAQADTALSANDPAAAEGLFSQAAARLPLNPLI 240 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--QMIRDVPYD 151 R L A Q AGK +A + P + YL G++ + D Sbjct: 241 R---LSLAQAQIEAGKNAEARQTLNTVLADIPAHP---WALYLRGLTAYRTNDMTAADKD 294 Query: 152 QRATKLMLQYMS 163 A + + + Sbjct: 295 LTAALALAKTLR 306 >gi|237756528|ref|ZP_04585056.1| tol-pal system protein YbgF [Sulfurihydrogenibium yellowstonense SS-5] gi|237691314|gb|EEP60394.1| tol-pal system protein YbgF [Sulfurihydrogenibium yellowstonense SS-5] Length = 136 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 57/144 (39%), Gaps = 27/144 (18%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + +++Y+ A+ N ++ + F + + +P + + ++ + Y+ KY+ A Sbjct: 8 QNDKQLYQYALDLYFRGNIEESRKAFTEFLKKYPDSDLYGNAIFWAGQTFYAEKKYKDAI 67 Query: 115 SLGEEYITQ-----------YPES-KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + E ++ + YP++ + Y Y +G + QY+ Sbjct: 68 DIWEIFLKKCDEGKIKKCIKYPDTMLKLGYAYIELG---------------NVEKGKQYL 112 Query: 163 SRIVERYTNSPYVKGARFYVTVGR 186 ++++Y +S A+ + V Sbjct: 113 QDLIKKYPDSEPASFAKKKLEVLN 136 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 47/131 (35%), Gaps = 31/131 (23%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + + + +++Y +S A G+ + +Y AI Sbjct: 23 RGNIEESRKAFTEFLKKYPDSDLYGNAI--------------FWAGQTFYAEKKYKDAID 68 Query: 212 RFQLVLAN-----------YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 +++ L Y D M +L AY+ L +++ ++ + + ++YP Sbjct: 69 IWEIFLKKCDEGKIKKCIKYPDT------MLKLGYAYIELGNVEKGKQYLQDLIKKYPDS 122 Query: 261 YWARYVETLVK 271 A + + ++ Sbjct: 123 EPASFAKKKLE 133 >gi|224534323|ref|ZP_03674901.1| surface-located membrane protein 1 [Borrelia spielmanii A14S] gi|224514425|gb|EEF84741.1| surface-located membrane protein 1 [Borrelia spielmanii A14S] Length = 1012 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 3/60 (5%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK +N+ A +N P + + A +G QA S E+ Sbjct: 841 LYLKASINLKSENYQNAISLYNLVIEKNPEN---TSAYINLAKAYEKSGNKTQAISTLEK 897 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 61/182 (33%), Gaps = 34/182 (18%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 ++ + ++ K ++A + + I P + +Y YL + Sbjct: 806 AIYNLSIAKFENNKLKEALEIINKAINLNP--EKSEY-LYLKASINLKS--------ENY 854 Query: 156 KLMLQYMSRIVERYTN--SPYVKGARFYVTVGRNQLA----AKEV---------EIGRYY 200 + + + ++E+ S Y+ A+ Y G A K + +G Y Sbjct: 855 QNAISLYNLVIEKNPENTSAYINLAKAYEKSGNKTQAISTLEKIMNKNNKLALNNLGILY 914 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS---LIQERY 257 K Y AI F+ + N EA L + + A++++ ++ Sbjct: 915 KKEKNYQKAIEIFEKAIIN-----SDIEAKYNLATTLIEINDNTRAKDLLKEYTKLKPNN 969 Query: 258 PQ 259 P+ Sbjct: 970 PE 971 Score = 35.9 bits (82), Expect = 6.2, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 61/210 (29%), Gaps = 36/210 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE-- 119 K + + KA E F + A + + Y G ++ ++ Sbjct: 707 NKGIALMMLNKNKKAIESFEK----------AIQIDINYDTAYYQKGIAEEKNGNIQQAF 756 Query: 120 --YITQYPESKNVDYVY-----------YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 + Y +K +Y + G +Y D + + + Sbjct: 757 TSFKNAYNLNKKTNYALKAGIVSNNLGNFKKGEAYLSFFNDNVKKPNE----IAIYNLSI 812 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEI---GRYYLKRGEYVAAIPRFQLVLANYSDA 223 ++ N+ +K A + N K + LK Y AI + LV+ + Sbjct: 813 AKFENNK-LKEALEIINKAINLNPEKSEYLYLKASINLKSENYQNAISLYNLVIEKNPEN 871 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLI 253 A L +AY +A + I Sbjct: 872 TSAY---INLAKAYEKSGNKTQAISTLEKI 898 Score = 35.5 bits (81), Expect = 8.5, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 36/118 (30%), Gaps = 31/118 (26%) Query: 69 KEQNFSKAYEYFNQ------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 KE+N+ KA E F + + A +A L +EY Sbjct: 916 KEKNYQKAIEIFEKAIINSDIEAKY-----------NLATTLIEINDNTRAKDLLKEYTK 964 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 P + + +G+ + DQ + +++++ N + + Sbjct: 965 LKPNNPE---ALHALGIIEYNENNN---DQT--------LRELIKKFPNYKKNENIKK 1008 >gi|253701371|ref|YP_003022560.1| restriction endonuclease [Geobacter sp. M21] gi|251776221|gb|ACT18802.1| restriction endonuclease [Geobacter sp. M21] Length = 520 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 50/152 (32%), Gaps = 23/152 (15%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +++ ++ A + + P + ++L+ + +Y+++ ++ I Sbjct: 7 ADGNRCMRQSDYGAAVRHLEKAVALDPRS---LEALMNLSVAYRKMCEYEKSIDAIKKAI 63 Query: 122 TQYPESKNVDYVYYLV-------------GMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 T Y Y + S + YD R ++ ++ + Sbjct: 64 TLN----EEQYALYEILATTCMSTENYCEAASAFEKALQGDYDPREASVLHARLAVCYQN 119 Query: 169 YTNSPYVKGARFY-VTVGRNQLAAKEVEIGRY 199 +S + A + + R+ L E+ R+ Sbjct: 120 SGDSNSTRTALKRSLQLHRSTL--HELYSYRF 149 >gi|163758851|ref|ZP_02165938.1| hypothetical protein HPDFL43_15547 [Hoeflea phototrophica DFL-43] gi|162284141|gb|EDQ34425.1| hypothetical protein HPDFL43_15547 [Hoeflea phototrophica DFL-43] Length = 203 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 21/130 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 A + ++ S A + +Q P FA R++ L Y+ G + ++ + + Sbjct: 90 ADKAMADKKNSLALDLLDQVVVLMPDFAEGWNRRATL-----HYAMGNHSKSMADINRVL 144 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + P + GM+ I D L L+ +++E Y + A+ Sbjct: 145 SLEPRHFGA-----MAGMA---AILDAS---GNDALALRAWEQMLEVYPANK---QAQTK 190 Query: 182 VTVGRNQLAA 191 V ++LA Sbjct: 191 VGELADKLAG 200 >gi|156044402|ref|XP_001588757.1| hypothetical protein SS1G_10304 [Sclerotinia sclerotiorum 1980] gi|154694693|gb|EDN94431.1| hypothetical protein SS1G_10304 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1043 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 44/141 (31%), Gaps = 28/141 (19%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108 +D + Y ++ +Q + KAYE + Q P + Y Sbjct: 290 SDQSDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 343 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRI 165 +Y+ A I P + V+Y +G Y I D L R Sbjct: 344 QYRDALDAYSRAIRLNP---YISEVWYDLGTLYESCNNQIND----------ALDAYQRA 390 Query: 166 VERYTNSPYVKGARFYVTVGR 186 E N+ ++ + + + R Sbjct: 391 AELDPNNVHI---KARLQLLR 408 >gi|219847042|ref|YP_002461475.1| NHL repeat-containing protein [Chloroflexus aggregans DSM 9485] gi|219541301|gb|ACL23039.1| NHL repeat-containing protein [Chloroflexus aggregans DSM 9485] Length = 680 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 20/55 (36%), Gaps = 3/55 (5%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +A+ + +A YF Q + + + + A + AG Y A + Sbjct: 356 RAMRLYLAGFYREAKPYFEQVLN-YNGSFI--MAYQGLADAYFKAGDYPAALAAY 407 >gi|94969110|ref|YP_591158.1| hypothetical protein Acid345_2083 [Candidatus Koribacter versatilis Ellin345] gi|94551160|gb|ABF41084.1| hypothetical protein Acid345_2083 [Candidatus Koribacter versatilis Ellin345] Length = 318 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 44/144 (30%), Gaps = 29/144 (20%) Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML----------QY 161 A L +P+S Y + R + QY Sbjct: 131 DARRLYYRVYDLFPQSPLAGEALY-RAADIEWQVDKADTSSRPSSKAADPNLRAQIDDQY 189 Query: 162 MSRIVERYTNSPYVKGARFYVTVGR-----NQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 M +++++ ++ + + A F++ + + L+ ++ Y +Y Sbjct: 190 MKLVMKKFPHTKWSEMAAFHLIDNKICGEWDGLSKCPLKEAEIY---EKYA--------- 237 Query: 217 LANYSDAEHAEEAMARLVEAYVAL 240 Y ++ EA+ Y AL Sbjct: 238 -EEYPNSPDTPEALYNAAYRYGAL 260 >gi|3028|emb|CAA37767.1| mitochondrial outer membrane 72K protein [Neurospora crassa] gi|227471|prf||1704253A ADP/ATP carrier receptor Length = 619 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 45/134 (33%), Gaps = 20/134 (14%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92 +G ++ D + Y +A L + F++A + + + DF F+ Sbjct: 382 LGHPDKAEEDFNKAIEQNAEDPDIYYHRAQLHFIKGEFAEAAKDYQKSIDLDSDFIFSH- 440 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + QY G + + + + ++ +V Y YY ++ DQ Sbjct: 441 -----IQLGVTQYKMGSIASSMATFRRCMKNFDQTPDV-YNYY----------GELLLDQ 484 Query: 153 RATKLMLQYMSRIV 166 + ++ + Sbjct: 485 NKFQEAIEKFDTAI 498 >gi|67477439|sp|P23231|TOM70_NEUCR RecName: Full=Mitochondrial import receptor subunit tom-70; AltName: Full=72 kDa mitochondrial outer membrane protein; AltName: Full=Mitochondrial import receptor for the ADP/ATP carrier; AltName: Full=Mitochondrial precursor proteins import receptor; AltName: Full=Translocase of outer membrane tom-70 gi|4530327|gb|AAD21979.1| mitochondrial precursor protein import receptor tom70 [Neurospora crassa] Length = 624 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 45/134 (33%), Gaps = 20/134 (14%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92 +G ++ D + Y +A L + F++A + + + DF F+ Sbjct: 387 LGHPDKAEEDFNKAIEQNAEDPDIYYHRAQLHFIKGEFAEAAKDYQKSIDLDSDFIFSH- 445 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + QY G + + + + ++ +V Y YY ++ DQ Sbjct: 446 -----IQLGVTQYKMGSIASSMATFRRCMKNFDQTPDV-YNYY----------GELLLDQ 489 Query: 153 RATKLMLQYMSRIV 166 + ++ + Sbjct: 490 NKFQEAIEKFDTAI 503 >gi|332243826|ref|XP_003271073.1| PREDICTED: lysine-specific demethylase 6A [Nomascus leucogenys] Length = 1401 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234 >gi|315187027|gb|EFU20784.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta thermophila DSM 6578] Length = 365 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 6/88 (6%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++ ++ LK+ +A F + A L+ G++ +A S Sbjct: 15 QLSQEGYALLKQDRPEEAIIRFEKILELDRHNNYA---LVGLGDAYRKKGEHDRAVSYYR 71 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIR 146 E + YP + Y + + Y R Sbjct: 72 ECLRYYPGNN---YALFGLADCYKAQER 96 >gi|70672796|gb|AAZ06657.1| ubiquitously transcribed tetratricopeptide repeat protein X-linked, transcript variant 3 [Homo sapiens] Length = 1356 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234 >gi|301787675|ref|XP_002929254.1| PREDICTED: lysine-specific demethylase 6A-like, partial [Ailuropoda melanoleuca] Length = 1359 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 65 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 111 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 112 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 171 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 172 LYETQRKYHSAKEAYEQLLQT 192 >gi|297709805|ref|XP_002831609.1| PREDICTED: lysine-specific demethylase 6A-like [Pongo abelii] Length = 1413 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234 >gi|330864769|ref|NP_001193504.1| lysine-specific demethylase 6A [Bos taurus] Length = 1453 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234 >gi|281354646|gb|EFB30230.1| hypothetical protein PANDA_019377 [Ailuropoda melanoleuca] Length = 1317 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 32 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 78 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 79 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 138 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 139 LYETQRKYHSAKEAYEQLLQT 159 >gi|238788117|ref|ZP_04631912.1| TPR repeat-containing protein yfgC [Yersinia frederiksenii ATCC 33641] gi|238723704|gb|EEQ15349.1| TPR repeat-containing protein yfgC [Yersinia frederiksenii ATCC 33641] Length = 483 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 39/139 (28%), Gaps = 35/139 (25%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV---YEKAVLFLKEQNFSKAYEYFNQ 82 +F + + + G S L++++ + ++ Y +A+L+ + + + +A Sbjct: 269 LFAKVRILGMYGSTENSLTPDLLETLSKGTTREQLAAKYGQAILWYQAKKYDEARNQLQP 328 Query: 83 CSRDFPFAGV---------------------------ARK-----SLLMSAFVQYSAGKY 110 P A+K L A G+ Sbjct: 329 LLTQQPGNIWFLDLMTDIDLGQNKPAQAIERLQKAIAAQKDEQPVLQLNLANAYVQGGQP 388 Query: 111 QQAASLGEEYITQYPESKN 129 A L Y P N Sbjct: 389 AAAIKLLNRYTFSNPNDPN 407 >gi|227540213|ref|ZP_03970262.1| phosphoglycerate mutase [Sphingobacterium spiritivorum ATCC 33300] gi|227239937|gb|EEI89952.1| phosphoglycerate mutase [Sphingobacterium spiritivorum ATCC 33300] Length = 524 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 16/88 (18%) Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS--PYVKGARFYVTVGRNQLAAKE 193 L G+ A + DQ + + + NS YVK + Y+T LA+ Sbjct: 144 LKGLCDAAQHAGLTSDQ----VFIHAFLDGRDTDPNSGIGYVKDLQDYLTHSAGTLAS-- 197 Query: 194 VEIGRYY-LKRGEYVAAIPRFQLVLANY 220 IGRYY + R R++ V Y Sbjct: 198 -AIGRYYAMDRD------NRWERVKETY 218 >gi|219519947|gb|AAI43279.1| UTX protein [Homo sapiens] Length = 1356 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234 >gi|219519945|gb|AAI43278.1| UTX protein [Homo sapiens] Length = 1453 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234 >gi|219517767|gb|AAI43273.1| UTX protein [Homo sapiens] Length = 1408 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234 >gi|194385276|dbj|BAG65015.1| unnamed protein product [Homo sapiens] Length = 1015 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234 >gi|194377488|dbj|BAG57692.1| unnamed protein product [Homo sapiens] Length = 1030 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 83 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 129 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 130 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 189 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 190 LYETQRKYHSAKEAYEQLLQT 210 >gi|194227838|ref|XP_001492320.2| PREDICTED: similar to ubiquitously transcribed tetratricopeptide repeat, X chromosome [Equus caballus] Length = 1338 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 44 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 90 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 91 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 150 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 151 LYETQRKYHSAKEAYEQLLQT 171 >gi|170064978|ref|XP_001867750.1| tetratricopeptide repeat protein 1 [Culex quinquefasciatus] gi|167882153|gb|EDS45536.1| tetratricopeptide repeat protein 1 [Culex quinquefasciatus] Length = 303 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 25/134 (18%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLL--MSAFVQYSAGKYQQ 112 E+ + K+ + K+ E + R P F+ A +S+L A + Sbjct: 126 AEELKAQGNELFKQGEYQKSAEMYTAALRICPVDFS--AERSILYANRAAAKTKLNFKPS 183 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGM----SYAQMIRDVPYDQRATKLMLQYMSRIVER 168 A + I P+ YL + + + + L+ +I+E Sbjct: 184 AIDDCTKAIEHNPK--------YLKALLRRATLYEEADKLD-------ESLEDFKQILEL 228 Query: 169 YTNSPYVKGARFYV 182 ++ + A+ + Sbjct: 229 DPDNAEARAAQARL 242 >gi|148703781|gb|EDL35728.1| ubiquitously transcribed tetratricopeptide repeat gene, X chromosome, isoform CRA_b [Mus musculus] Length = 1288 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 83 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 129 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 130 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 189 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 190 LYETQRKYHSAKEAYEQLLQT 210 >gi|148703780|gb|EDL35727.1| ubiquitously transcribed tetratricopeptide repeat gene, X chromosome, isoform CRA_a [Mus musculus] Length = 953 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 114 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 160 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 161 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 220 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 221 LYETQRKYHSAKEAYEQLLQT 241 >gi|148703782|gb|EDL35729.1| ubiquitously transcribed tetratricopeptide repeat gene, X chromosome, isoform CRA_c [Mus musculus] Length = 1333 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 83 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 129 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 130 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 189 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 190 LYETQRKYHSAKEAYEQLLQT 210 >gi|122066655|sp|O70546|KDM6A_MOUSE RecName: Full=Lysine-specific demethylase 6A; AltName: Full=Histone demethylase UTX; AltName: Full=Ubiquitously transcribed TPR protein on the X chromosome; AltName: Full=Ubiquitously transcribed X chromosome tetratricopeptide repeat protein gi|123208415|emb|CAM18408.1| ubiquitously transcribed tetratricopeptide repeat gene, X chromosome [Mus musculus] gi|123209608|emb|CAM27157.1| ubiquitously transcribed tetratricopeptide repeat gene, X chromosome [Mus musculus] Length = 1401 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 109 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 155 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 156 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 215 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 216 LYETQRKYHSAKEAYEQLLQT 236 >gi|115383820|ref|XP_001208457.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114196149|gb|EAU37849.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 748 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +L+ ++ AA+ + VL + +E+A+ R +A L ++ + LI E YP+ Sbjct: 249 FLRSHQFDAALAEAETVLHV---SPISEKALFRKSQALYYLGRFQQSYDTHKLIAEHYPE 305 Query: 260 GYWAR 264 A+ Sbjct: 306 NEMAK 310 >gi|94676677|ref|YP_588573.1| hypothetical protein BCI_0101 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219827|gb|ABF13986.1| conserved hypothetical protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 215 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 3/56 (5%) Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + ++ YP+S + YY +G + + Q + S+I + Y N Sbjct: 141 AFQRFMNTYPQSNYLPNAYYSLGQLNYNQGKKIEAIQ---EQAKAIYSKICKTYPN 193 >gi|62087170|dbj|BAD92032.1| ubiquitously transcribed tetratricopeptide repeat variant [Homo sapiens] Length = 1406 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 112 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 158 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 159 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 218 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 219 LYETQRKYHSAKEAYEQLLQT 239 >gi|189011544|ref|NP_066963.2| lysine-specific demethylase 6A [Homo sapiens] gi|332860604|ref|XP_003317483.1| PREDICTED: lysine-specific demethylase 6A [Pan troglodytes] gi|206729942|sp|O15550|KDM6A_HUMAN RecName: Full=Lysine-specific demethylase 6A; AltName: Full=Histone demethylase UTX; AltName: Full=Ubiquitously-transcribed TPR protein on the X chromosome; AltName: Full=Ubiquitously-transcribed X chromosome tetratricopeptide repeat protein gi|57162135|emb|CAI40508.1| ubiquitously transcribed tetratricopeptide repeat, X chromosome [Homo sapiens] gi|57208875|emb|CAI41479.1| ubiquitously transcribed tetratricopeptide repeat, X chromosome [Homo sapiens] gi|119579772|gb|EAW59368.1| ubiquitously transcribed tetratricopeptide repeat, X chromosome [Homo sapiens] gi|168275736|dbj|BAG10588.1| ubiquitously transcribed X chromosome tetratricopeptide repeat protein [synthetic construct] Length = 1401 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234 >gi|118350326|ref|XP_001008444.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89290211|gb|EAR88199.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 550 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 74/219 (33%), Gaps = 46/219 (21%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D R +Y +++ KE N KA F + ++ P + L + + GK + Sbjct: 334 DSRNADALYYLGIIYQKENNIQKAISIFKEVTQINP-TKYIAQIQLGQLY--HQQGKVED 390 Query: 113 AASLGEEYITQYPES----KNVDYVYYLVG-------MSYAQMIRDVP------------ 149 A + + P + + ++ Y +G + + D Sbjct: 391 AIISYKRILQVQPNNYFALNYLSFLLYELGDFNQAELLCKKALAVDPNAYEPYHNLGLIY 450 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 D+ + +++ ++ + N L G Y ++G A Sbjct: 451 QDKLLYEQAIKFYQSALKSNPDC----------AEAYNNL-------GCIYYEKGNLKEA 493 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 I +F+ + A + ++ + Y + L++++++ Sbjct: 494 INQFEEAIKANPKFAEAHKNLSII---YENMGLIEKSQQ 529 >gi|33859492|ref|NP_033509.1| lysine-specific demethylase 6A [Mus musculus] gi|31419680|gb|AAH53433.1| Ubiquitously transcribed tetratricopeptide repeat gene, X chromosome [Mus musculus] gi|123208416|emb|CAM18409.1| ubiquitously transcribed tetratricopeptide repeat gene, X chromosome [Mus musculus] gi|123209609|emb|CAM27158.1| ubiquitously transcribed tetratricopeptide repeat gene, X chromosome [Mus musculus] Length = 1424 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 109 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 155 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 156 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 215 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 216 LYETQRKYHSAKEAYEQLLQT 236 >gi|62739574|gb|AAH93868.1| Ubiquitously transcribed tetratricopeptide repeat, X chromosome [Homo sapiens] gi|109731235|gb|AAI13382.1| Ubiquitously transcribed tetratricopeptide repeat, X chromosome [Homo sapiens] Length = 1401 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234 >gi|3021457|emb|CAA05692.1| UTX [Mus musculus] Length = 1333 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 41 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 87 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 88 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 147 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 148 LYETQRKYHSAKEAYEQLLQT 168 >gi|325107034|ref|YP_004268102.1| hypothetical protein Plabr_0453 [Planctomyces brasiliensis DSM 5305] gi|324967302|gb|ADY58080.1| hypothetical protein Plabr_0453 [Planctomyces brasiliensis DSM 5305] Length = 351 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 74/211 (35%), Gaps = 32/211 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 L L N+++A F + PF + A VQ + G+ QA S + I Sbjct: 162 GQLQLASSNYAEAEAAFTKIE-QSPFDDWKLSAKSSKARVQLAQGQIDQAISGFDSVI-- 218 Query: 124 YPESKNVDYV------YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + D ++G + A + + +DQ T L Sbjct: 219 --NAPAKDDATKQRQLEAMLGKASA-LNQKNQFDQSLTLLA------------------D 257 Query: 178 ARFYVTVGRNQL-AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE-HAEEAMARLVE 235 ++ +L A +V G L +G+ A+ F LV +S + + EA+ L + Sbjct: 258 VIAKISEDNARLQAEAQVRRGTALLGQGKNQEALMAFLLVDILFSGQQDYHAEALYHLNK 317 Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYV 266 + + A E ++ YP W + + Sbjct: 318 LWPTVGQPGRAEEARGTLETEYPNSPWTKKL 348 >gi|239947836|ref|ZP_04699589.1| Tol system periplasmic component [Rickettsia endosymbiont of Ixodes scapularis] gi|239922112|gb|EER22136.1| Tol system periplasmic component [Rickettsia endosymbiont of Ixodes scapularis] Length = 245 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 18/46 (39%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A Y K +A + +I +YP S + Y+ G + + Sbjct: 122 DLALAAYKDNKLTEAKDKFKNFIQKYPNSSLISNAYFWYGECFFKQ 167 Score = 35.9 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 25/65 (38%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D+ ++ Y+ A+ K+ ++A + F + +P + + + + Y Sbjct: 113 DIAPDKQAYDLALAAYKDNKLTEAKDKFKNFIQKYPNSSLISNAYFWYGECFFKQKDYNG 172 Query: 113 AASLG 117 AA Sbjct: 173 AAVNY 177 >gi|239618068|ref|YP_002941390.1| Tetratricopeptide TPR_2 repeat protein [Kosmotoga olearia TBF 19.5.1] gi|239506899|gb|ACR80386.1| Tetratricopeptide TPR_2 repeat protein [Kosmotoga olearia TBF 19.5.1] Length = 355 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 70/226 (30%), Gaps = 43/226 (19%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 K L+++E + ++ + P + + ++ GKY++AA E+ Sbjct: 135 KGTLYIEEGKIDEGIKWLEEAIEKNPALVSAYSALGQ-----AYFNMGKYEEAAQYWEKE 189 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---PY--- 174 + P ++Y + + + + ++ N+ Y Sbjct: 190 LILVPG----------RVVTYFMLADAYSLSGQN-DKAINVLKTLISNDPNNLLARYQLI 238 Query: 175 --------VKGARFYVTVGRNQLAAK--EVEI-GRYYLKRGEYVAAIPRFQLVLANYSDA 223 + A+ N + ++EI R + G Y R + ++ + + Sbjct: 239 ELYREIGEEEEAKKLKMEILNAIPTHTNDIEIWARVQFEHGNY----DRVKEIIEKFVET 294 Query: 224 EHAEEAMA-RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + + LV Y +A ++ + W Y + Sbjct: 295 SPDMQHLKLLLVIPYAKTGDTQKACRLLKEFKNN---EMWYYYGKK 337 >gi|28898801|ref|NP_798406.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus RIMD 2210633] gi|260365325|ref|ZP_05777876.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus K5030] gi|260880825|ref|ZP_05893180.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AN-5034] gi|260897845|ref|ZP_05906341.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus Peru-466] gi|28807020|dbj|BAC60290.1| putative heat shock protein [Vibrio parahaemolyticus RIMD 2210633] gi|308087595|gb|EFO37290.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus Peru-466] gi|308093631|gb|EFO43326.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AN-5034] gi|308111243|gb|EFO48783.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus K5030] Length = 391 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 25/186 (13%), Positives = 58/186 (31%), Gaps = 34/186 (18%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A ++ +A + F Q + + A + L++ + ++++A + Sbjct: 114 AKDYMVSGFLDRAEKIFEQLVEEPDYKEAALQ-QLVTIY--QQTREWEKAIHYANQLAKM 170 Query: 124 -YPESK---NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 S+ N+ + + I + + +Q+ + + Sbjct: 171 GNQRSRMRTNIAH--------FWCEIAMLDQADGNSNKAIQHFKKALSEDPKCVRAS--- 219 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + +GR YL+ +Y I VL D + + + + E Y Sbjct: 220 --------------ISLGRIYLESEDYKQTIKYLTGVLE--QDKDFVSDVLPTIAECYHH 263 Query: 240 LALMDE 245 L DE Sbjct: 264 LGQEDE 269 >gi|67923297|ref|ZP_00516781.1| Peptidase M48, Ste24p:Peptidase M, neutral zinc metallopeptidases, zinc-binding site [Crocosphaera watsonii WH 8501] gi|67854873|gb|EAM50148.1| Peptidase M48, Ste24p:Peptidase M, neutral zinc metallopeptidases, zinc-binding site [Crocosphaera watsonii WH 8501] Length = 672 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ K + L++Q +S+A + +P + + L+ A G+ ++A +L Sbjct: 4 DLLNKGLQALQQQQYSEAVSLLGNFCQHYPDRNSDFYVQGLIALARAYRGNGQQEKAITL 63 Query: 117 GE 118 + Sbjct: 64 AQ 65 >gi|320589942|gb|EFX02398.1| NADPH oxidase regulator [Grosmannia clavigera kw1407] Length = 518 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 36/110 (32%), Gaps = 18/110 (16%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + EV+ A+ F +A F + S K L + + G++++A Sbjct: 4 KQEIEVWVAALGSYDSNEFDEALNEFEKVSD-------TSKILFNMGVIHATLGEHEKAV 56 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + I + + Y+ G+S + + L + Sbjct: 57 ECYQRAIRL---DQYLAVAYFQQGVSNFLL--------GDFEEALANFND 95 >gi|295088007|emb|CBK69530.1| hypothetical protein [Bacteroides xylanisolvens XB1A] Length = 735 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 38/99 (38%), Gaps = 9/99 (9%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ ++ A +L ++ + +A E + + F G + + + KY +A Sbjct: 498 WEDVLFPIADFYLAKERWDEAIEIYEELESIGGFEGESAEYYQKFGYALQKRKKYAEAIQ 557 Query: 116 LGEEYITQYP----ESKNVDYVY-----YLVGMSYAQMI 145 + T P ++++ Y Y ++Y + + Sbjct: 558 AYLKADTLKPDNIWNNRHLAICYRLNRNYQAALTYYKKV 596 >gi|269139428|ref|YP_003296129.1| hypothetical protein ETAE_2083 [Edwardsiella tarda EIB202] gi|267985089|gb|ACY84918.1| hypothetical protein ETAE_2083 [Edwardsiella tarda EIB202] gi|304559324|gb|ADM41988.1| predicted periplasmic heat shock protein YciM precursor [Edwardsiella tarda FL6-60] Length = 389 Score = 38.6 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 56/182 (30%), Gaps = 30/182 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ + +A E F+Q + F A + L+ + + +A E+ + Sbjct: 114 GRDYMAAGLYDRAEEMFSQLVDEADFRVSALQ-QLLLI--HQATSDWHKAIDAAEKLVRL 170 Query: 124 YPESKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + + + ++ ++ M D+ Q K V Sbjct: 171 GKDQQRGEIAHFYCELALQAMGSDDLDRAQSLLKKAAA--------------ADKGCARV 216 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 ++ R GR + GE A+ F VL D E + + Y AL Sbjct: 217 SIMR----------GRVFQALGEPAKAVAAFSQVLE--QDKAFVSEVLPLMETCYQALGQ 264 Query: 243 MD 244 + Sbjct: 265 PE 266 >gi|313683637|ref|YP_004061375.1| hypothetical protein [Sulfuricurvum kujiense DSM 16994] gi|313156497|gb|ADR35175.1| Tetratricopeptide repeat [Sulfuricurvum kujiense DSM 16994] Length = 347 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 46/137 (33%), Gaps = 23/137 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 A F + N+ K+ E ++ P + +LL+ + AG ++A ++ Sbjct: 78 AQSFEHQGNYEKSVEIYHALLSKNRDP--IFQKDALLLLGKSFFKAGFLERARQT---FM 132 Query: 122 T-QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + S + + + Y + ++ L+ M + E + + Sbjct: 133 QILH-NSPRTPQALHYLILIY-EQLQQYD-------KALEVMESLQELSPGT-----SNE 178 Query: 181 YV-TVGRNQLAAKEVEI 196 + R L ++I Sbjct: 179 KLYIECRILLNDHRIDI 195 Score = 35.5 bits (81), Expect = 8.8, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%) Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 ++ +A+ L+ Y L D+A EV+ +QE P Sbjct: 137 NSPRTPQALHYLILIYEQLQQYDKALEVMESLQELSPGTS 176 >gi|331665151|ref|ZP_08366052.1| cellulose synthase operon protein C [Escherichia coli TA143] gi|331057661|gb|EGI29647.1| cellulose synthase operon protein C [Escherichia coli TA143] Length = 1157 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 80/235 (34%), Gaps = 34/235 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198 Q + + +V R ++ ++ A G+ A ++ + Sbjct: 557 RAQWS-----SNIQELVNRLQSNQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLAD 611 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 6.0, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|254720177|ref|ZP_05181988.1| TPR repeat-containing protein [Brucella sp. 83/13] gi|265985184|ref|ZP_06097919.1| TPR repeat-containing protein [Brucella sp. 83/13] gi|264663776|gb|EEZ34037.1| TPR repeat-containing protein [Brucella sp. 83/13] Length = 295 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 48/160 (30%), Gaps = 33/160 (20%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ--------------REVYE-KAVLFL 68 L I ++ + G + +S +D E Y + + Sbjct: 32 LIIAVALLALTVAGCQSTNSTLSTVDRAQGSSENISSLTSVIQSNPRDPEGYNVRGSAYG 91 Query: 69 KEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 K + +A F+Q P + A ++L+ Y G +A I P+ Sbjct: 92 KAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR----YM-GDNNKAVQDYSRAIQLNPQ 146 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 D Y G Y Q R DQ L ++ + Sbjct: 147 ---YDAAYIGRGNVYRQAGR---LDQ-----ALNNFNQAI 175 >gi|163782042|ref|ZP_02177041.1| threonine synthase [Hydrogenivirga sp. 128-5-R1-1] gi|159882574|gb|EDP76079.1| threonine synthase [Hydrogenivirga sp. 128-5-R1-1] Length = 261 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 16/114 (14%), Positives = 36/114 (31%), Gaps = 27/114 (23%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 ++++ + Y A IG+ Y + G+ + R + + Sbjct: 152 EARDAFLNFIKKFPENKYTDNAF--------------FWIGKIYQELGD----LKRAEEI 193 Query: 217 LA---------NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 D +A +L+ V ++EA S++ +R+P Sbjct: 194 YKSLVDKCERGRLPDCNKLPDAYFQLMRINVDRGNVEEANRYYSILIDRFPTSD 247 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 50/156 (32%), Gaps = 15/156 (9%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G ++ + +V Y+KA+ + +A + F + FP Sbjct: 113 TGSLKEPQEKAEEEKEPEVEDAETAYKKAIELYSVKKLYEARDAFLNFIKKFPENKYTDN 172 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYI------TQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + G ++A + + + P+ + Y+ + + Sbjct: 173 AFFWIGKIYQELGDLKRAEEIYKSLVDKCERGRL-PDCNKLPDAYF--------QLMRIN 223 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 D+ + +Y S +++R+ S AR + Sbjct: 224 VDRGNVEEANRYYSILIDRFPTSDAAVRAREQKVLL 259 >gi|159027098|emb|CAO89283.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 363 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 38/123 (30%), Gaps = 23/123 (18%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 Q + L + CF + + V+ E+ +A +K N+ + Sbjct: 1 MKQFTRLILLVGLLAGGCFSPSIAIADNPAGAI--VSKDSQVNELLRQARQLVKNGNYGE 58 Query: 76 AYEYFNQCSRDFPFAGVARKSLLM---------SAFVQYSAGKYQQAASLGEEYITQYPE 126 A + + + L F+Q G Y AA ++ ++ P Sbjct: 59 AIAIYE------------QAAALDGNNARIFSGIGFLQTRQGDYNAAAQAYQKALSLDPS 106 Query: 127 SKN 129 + + Sbjct: 107 NPD 109 >gi|86606572|ref|YP_475335.1| Slt family transglycosylase [Synechococcus sp. JA-3-3Ab] gi|86555114|gb|ABD00072.1| transglycosylase, SLT family [Synechococcus sp. JA-3-3Ab] Length = 708 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 45/162 (27%), Gaps = 35/162 (21%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 A + +Y +AA + Y G S+ + + + Sbjct: 204 LADAYWEQREYGKAARAYGR-------APTTSRNLYRQGRSH-----QISRELPQARAAY 251 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 Q ++ ++ ++ R + + AI + V + Sbjct: 252 QA---LLAQFPDAAEASLTRRRLAELSDL------------------PTAIELLRQVGSG 290 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A EA+ L + Y A+ V + ER+P Sbjct: 291 --SDREAPEALLSLSQLYDRNGSPQSAQAVRQTLWERFPVSE 330 >gi|67920262|ref|ZP_00513782.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii WH 8501] gi|67857746|gb|EAM52985.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii WH 8501] Length = 353 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 23/177 (12%), Positives = 53/177 (29%), Gaps = 45/177 (25%) Query: 54 VRYQREVYEKAVLFLKEQNFSKA---------YEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + +++++ E + +A + N + + + ++ L A Sbjct: 23 TQSIEQLFQQGNQAQNEGRYREAESIWRQIISIDSNNAIAYFYIGLALRKQGKLEEATAA 82 Query: 105 YS----------------------AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 Y GK ++A + ++ I P + Y +G++ Sbjct: 83 YKKAIELDPNYSFAYNNMGNALRKQGKLEEAIAAYKKAIELDPND---AFAYNNMGLALD 139 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 DQ + + + +E N Y A + + N+ E I Y Sbjct: 140 --------DQGKLEEAIAAYKKAIELDPN--YAT-AYYNMGNALNRQGKLEEAIAAY 185 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 36/122 (29%), Gaps = 20/122 (16%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGK 109 D Y Y ++ +A + + ++ F + GK Sbjct: 158 DPNYATAYYNMGNALNRQGKLEEAIAAYKKAIELDPNYSF------AYNNMGVALRKQGK 211 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y +A + ++ I P N + Y +G++ Q + + +E Sbjct: 212 YDEAIAAYKKAIEINP---NYAFAYNNMGVAL--------RKQGKYDEAIAAYKKAIEIN 260 Query: 170 TN 171 N Sbjct: 261 PN 262 >gi|297460838|ref|XP_002701293.1| PREDICTED: sperm associated antigen 1 [Bos taurus] Length = 925 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 12/117 (10%), Positives = 36/117 (30%), Gaps = 17/117 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 EK K ++ +A +Y+ + P A ++ + A E+ Sbjct: 215 EKGNEAFKSGDYEEAVKYYTRSLSVLPTVAAYNNRAQAEL-----KLQNWNSAFQDCEKV 269 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P + +Y + + ++ +++++ ++ K Sbjct: 270 LELEPGNLK---ALLRRATTYKHQNK--------LQEAIEDLNKVLAVEPDNELAKK 315 >gi|282164261|ref|YP_003356646.1| hypothetical protein MCP_1591 [Methanocella paludicola SANAE] gi|282156575|dbj|BAI61663.1| hypothetical protein [Methanocella paludicola SANAE] Length = 805 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 14/119 (11%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + +A F + R P + +A ++ G +++A + +E I P + Sbjct: 519 RRPEEALNAFKEAVRLEPNSAIAHTY---LGDALWATGHHEEAIAKYKEAIQLEPTNT-- 573 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 Y +Y +G+SY+ M R L I++ V R + ++ + Sbjct: 574 -YAHYSLGISYSSM--------RKLDEALAEYDEILKINPKDEKVVMNRANIIHWKDMI 623 >gi|281423272|ref|ZP_06254185.1| aerotolerance-related exported protein [Prevotella oris F0302] gi|281402608|gb|EFB33439.1| aerotolerance-related exported protein [Prevotella oris F0302] Length = 255 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 9/69 (13%), Positives = 22/69 (31%), Gaps = 4/69 (5%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +A +E+ + +A + + +GV+ Y +A E Sbjct: 31 AEADKAYQEKKYQQAIKDYESL--LH--SGVSASLYYNLGNAYYRTDNITKAILNYERAA 86 Query: 122 TQYPESKNV 130 P + ++ Sbjct: 87 LLEPGNSDI 95 >gi|282895338|ref|ZP_06303539.1| TPR repeat protein [Raphidiopsis brookii D9] gi|281199589|gb|EFA74450.1| TPR repeat protein [Raphidiopsis brookii D9] Length = 260 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 33/115 (28%), Gaps = 14/115 (12%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 + Y + + A F+Q +P + + + G Q+A S Sbjct: 22 AQPYYNRGATRNDLGDKQGAINDFSQFINFYPRNSL---AYFNRGIAWHELGDKQRAISD 78 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + I P + YY G S + D + + ++ N Sbjct: 79 FTQVIKLNPNNVA---AYYNRGASRS--------DLGDKHGAINDFTTVINLNPN 122 >gi|257457199|ref|ZP_05622375.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC 35580] gi|257445458|gb|EEV20525.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC 35580] Length = 1152 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 10/64 (15%), Positives = 24/64 (37%), Gaps = 6/64 (9%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 E+ +KA ++ +N+ A + +P + L + ++ G Y+ A Sbjct: 707 ADELLQKADKAVQAENWDTAAALLEEGIARYPANEL---FQLKLGDMYFNNGLYEPA--- 760 Query: 117 GEEY 120 + Sbjct: 761 YRRF 764 >gi|254283922|ref|ZP_04958890.1| sulfotransferase [gamma proteobacterium NOR51-B] gi|219680125|gb|EED36474.1| sulfotransferase [gamma proteobacterium NOR51-B] Length = 663 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 20/107 (18%) Query: 157 LMLQYMSRIVERYTNS---------------PYVKGARF--YVTVGRNQLAAKEVEIGRY 199 + R+V R ++ Y A + A +++ R Sbjct: 162 EAEAILRRLVRRNPDNAEALRQLATMASEHFQYADAAALLTRAVEASPRFARGWLDLARA 221 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 YL G+Y AA+ + V+A Y + A +A L + L +EA Sbjct: 222 YLDLGDYNAALESSERVVALYPE---AADAHVVLANSQSQANLHEEA 265 >gi|145489287|ref|XP_001430646.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124397745|emb|CAK63248.1| unnamed protein product [Paramecium tetraurelia] Length = 663 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 64/226 (28%), Gaps = 43/226 (19%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQ---C 83 +I CF + E +S + ++ + Y F + +NF +A + + Sbjct: 440 IAIGNCFSLTKEIDNSIKFFGRAIQLRKDYSYAYTLSGHEFSQNENFQQAKKSYEAATSL 499 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + + + + Y KY+ A + I P + + MSYA Sbjct: 500 DQRQ-YNAWWGQGNM-----YYKTDKYEDAIKCFIQAIRINPNNPVLPTFL---AMSYAA 550 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 L+Y + + A + +K Sbjct: 551 KGEHND--------ALKYFEQSERLDP-----------MNGLNKYQKANSL------IKM 585 Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMAR-LVEAYVALALMDEARE 248 +Y A+ Q + E A+ + L + EA+ Sbjct: 586 DKYEQALSELQTLSQFIPK----EAAIYILMGRILKKLNKIQEAQN 627 >gi|262409404|ref|ZP_06085947.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294644941|ref|ZP_06722677.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a] gi|294807481|ref|ZP_06766283.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC 1b] gi|262352856|gb|EEZ01953.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292639754|gb|EFF58036.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a] gi|294445321|gb|EFG13986.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC 1b] Length = 735 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 38/99 (38%), Gaps = 9/99 (9%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ ++ A +L ++ + +A E + + F G + + + KY +A Sbjct: 498 WEDVLFPIADFYLAKERWDEAIEIYEELESIGGFEGESAEYYQKFGYALQKRKKYAEAIQ 557 Query: 116 LGEEYITQYP----ESKNVDYVY-----YLVGMSYAQMI 145 + T P ++++ Y Y ++Y + + Sbjct: 558 AYLKADTLKPDNIWNNRHLAICYRLNRNYQAALTYYKKV 596 >gi|237713690|ref|ZP_04544171.1| conserved hypothetical protein [Bacteroides sp. D1] gi|229446137|gb|EEO51928.1| conserved hypothetical protein [Bacteroides sp. D1] Length = 734 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 38/99 (38%), Gaps = 9/99 (9%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ ++ A +L ++ + +A E + + F G + + + KY +A Sbjct: 497 WEDVLFPIADFYLAKERWDEAIEIYEELESIGGFEGESAEYYQKFGYALQKRKKYAEAIQ 556 Query: 116 LGEEYITQYP----ESKNVDYVY-----YLVGMSYAQMI 145 + T P ++++ Y Y ++Y + + Sbjct: 557 AYLKADTLKPDNIWNNRHLAICYRLNRNYQAALTYYKKV 595 >gi|254515365|ref|ZP_05127426.1| putative PEP-CTERM system TPR-repeat lipoprotein [gamma proteobacterium NOR5-3] gi|219677608|gb|EED33973.1| putative PEP-CTERM system TPR-repeat lipoprotein [gamma proteobacterium NOR5-3] Length = 926 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 3/92 (3%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G + +D+ Y + + L+ + ++ A + F+Q P A Sbjct: 250 LGKAEDADKDLAQLEKLIPNYPEVNFLRGQLYFDDGDYKNAIDAFSQVLTANP--NHAG- 306 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 +LL+SA A +++T P Sbjct: 307 ALLLSANANVREQNLATAQRQYTQFLTLQPGH 338 >gi|159028702|emb|CAO88174.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 165 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 48/157 (30%), Gaps = 20/157 (12%) Query: 19 LYKFALTIFFSI----AVCFLVGWERQSSRDVYLDSVTDVRYQREV--YEKAVLFLKEQN 72 + FAL S+ + + SR + Q + Y + V +++++ Sbjct: 1 MKSFALLTTVSLISLSTLATVRPVMALESRQPAETRIAQGNNQDAIGHYNRGVDYIQQKK 60 Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 + + F + P + L + GK A S + + P + Sbjct: 61 YDLSLAEFTKAIELDP--NYTE-AYLNRGNLYQQQGKPDLALSDYNQALNINPRN---AE 114 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y G+ Y + T+ + + E Y Sbjct: 115 AYVRRGILYYYR--------QETEKAIGDFRQAAELY 143 >gi|46580776|ref|YP_011584.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio vulgaris str. Hildenborough] gi|46450196|gb|AAS96844.1| N-acetylmuramoyl-L-alanine amidase, putative [Desulfovibrio vulgaris str. Hildenborough] Length = 543 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 8/97 (8%) Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 A + V + R LA + + + AA+ R++ V Y + A++A+ Sbjct: 55 APAALYRVALTREGLARRSMNPADF-------KAAVDRYEEVARRYPRSALADDALFAAA 107 Query: 235 E-AYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + L AR+++ +P+G A ++ Sbjct: 108 KLCMERLDDASAARKILERQLREFPKGDMADAARAML 144 >gi|14325465|dbj|BAB60369.1| hypothetical protein [Thermoplasma volcanium GSS1] Length = 513 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 59/183 (32%), Gaps = 29/183 (15%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSAGKYQ 111 D + E E+A + N+++A E ++ P SL L+ A Y G Y Sbjct: 7 DEKTPDEYAEEARSDIAAGNYAEAIEKIDKAIDKEPRNP----SLHLIRADALYRQGNYS 62 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + + + L + Y M D + ++ + Y Sbjct: 63 SAIEELNFTEHMDKNNPEL---FSLKSICYGSM-GDFKRSKEEADKAIKA----DQSYPF 114 Query: 172 SPYVKGARFYVTVGRNQLAAKEV---------------EIGRYYLKRGEYVAAIPRFQLV 216 + Y + A + A K+ ++ Y ++ +Y A+ + V Sbjct: 115 AYYNRAAALRGLGDVDG-AEKDFRKYIEMQPSDPDPHYDLAEIYFEKKDYKKAMEEVKAV 173 Query: 217 LAN 219 L N Sbjct: 174 LRN 176 >gi|295132916|ref|YP_003583592.1| TPR repeat protein [Zunongwangia profunda SM-A87] gi|294980931|gb|ADF51396.1| TPR repeat protein [Zunongwangia profunda SM-A87] Length = 686 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 76/225 (33%), Gaps = 45/225 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ +L++ NF+KA +F +++P A L G+ Q+A S+ E + Sbjct: 23 QEGFGYLEKGNFAKAETFFEAILKEYPDNKTAN---LCYGRAVGLNGEPQKATSIFTELL 79 Query: 122 TQYPESKNVD--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS------- 172 +YP ++ Y L+ S+ +Y S +V+RY + Sbjct: 80 EEYPGDIEIELNYAESLLWGSHFN-------------KAKEYYSDLVQRYPENFAALLGF 126 Query: 173 -------PYVKGARFYVTVGRN--------QLAAKEVEIGRYYLKRGE--YVAAIPRFQL 215 A YV ++ K + +G Y K Y AI Sbjct: 127 ANTLSNLKEYDNALLYVNRALETSPGNPNAMVSKKYIRLGFAYQKMQNQEYEPAISLLNK 186 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L ++S E + Y+ +EA+ V + + Sbjct: 187 NLEDFSG---DRETLLNKANIYLITKETEEAKNVYLELAKNAKDS 228 >gi|32471266|ref|NP_864259.1| hypothetical protein RB1168 [Rhodopirellula baltica SH 1] gi|32396968|emb|CAD71938.1| hypothetical protein-transmembrane prediction [Rhodopirellula baltica SH 1] Length = 742 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 41/113 (36%), Gaps = 16/113 (14%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK---SLLMSAFVQYSAGKYQQA-ASLGEE 119 A L + A +N +G + + + L A+ +G+ QA + ++ Sbjct: 268 ASGLLDDGQLELAQSTYNMVID----SGDSPQLATARLGLAWCTAMSGEDDQAALTAIDQ 323 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 ++ + E +V + + + DQ + R++ ++ +S Sbjct: 324 FLKHHSEHADVPSALLMQMSCQFRTGQSESADQT--------LERLLTQHADS 368 >gi|331649352|ref|ZP_08350438.1| cellulose synthase operon protein C [Escherichia coli M605] gi|330909587|gb|EGH38101.1| cellulose synthase operon protein C [Escherichia coli AA86] gi|331041850|gb|EGI13994.1| cellulose synthase operon protein C [Escherichia coli M605] Length = 1157 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 78/235 (33%), Gaps = 34/235 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ +A +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSKADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198 Q + +V R N ++ A G+ A ++ + Sbjct: 557 RAQWN-----SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 611 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663 >gi|242279842|ref|YP_002991971.1| hypothetical protein Desal_2376 [Desulfovibrio salexigens DSM 2638] gi|242122736|gb|ACS80432.1| TPR repeat-containing protein [Desulfovibrio salexigens DSM 2638] Length = 247 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 6/65 (9%), Positives = 18/65 (27%), Gaps = 3/65 (4%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + ++ A Q ++ P + L + G + A + + + Sbjct: 46 GQELIDRGDYELAVSSLEQSLKNHPRSDW--LYSL-LGRAYFKMGDLELAEAQFRKALDI 102 Query: 124 YPESK 128 + Sbjct: 103 NKNNP 107 >gi|118588378|ref|ZP_01545787.1| probable O-linked GlcNAc transferase protein [Stappia aggregata IAM 12614] gi|118439084|gb|EAV45716.1| probable O-linked GlcNAc transferase protein [Stappia aggregata IAM 12614] Length = 271 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 53/168 (31%), Gaps = 34/168 (20%) Query: 19 LYKFA-----LTIFFSIAVCFLVG---------WERQSSRDVYLDSVTDVRYQRE-VYE- 62 ++KF + + +A C G S+ L +V D Y Sbjct: 1 MHKFLPHATLIGLASMLAACNTSGVYDDVPTNSSAGSSTNIASLTAVIDANPNDASAYST 60 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + + + + KA E FN+ + P + A + L+ G+ +QA + Sbjct: 61 RGIAYGQAGKLDKAVEDFNKALQLNPQSYQTYANRGLV-----YRRMGQNEQAVADYTRA 115 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 I P + D Y G Y Q L + ++ R Sbjct: 116 INIKP---DYDVAYVGRGNIY--------RQQGNYNAALADFNSVITR 152 >gi|84624952|ref|YP_452324.1| putative lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84368892|dbj|BAE70050.1| putative lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 204 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 33/108 (30%), Gaps = 13/108 (12%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 +F + + LVG + S +A + +A + F SR Sbjct: 14 MFALVLLSALVGCASAPKKAPSPSSFDATM------SRAEAEVTNGGPEQALKTFEDASR 67 Query: 86 DFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 P R + L Q+ Y +A +E + + P D Sbjct: 68 ADPTRKEPWVRIAQL-----QFDRANYARAIVAAQEVLQRDPNDLVAD 110 >gi|99082203|ref|YP_614357.1| tetratricopeptide TPR_2 [Ruegeria sp. TM1040] gi|99038483|gb|ABF65095.1| Tetratricopeptide TPR_2 [Ruegeria sp. TM1040] Length = 283 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y+ A+ L+ +N+ A + F +P + + + G ++AA Sbjct: 164 YKLAMSDLEAENYQAAADRFATFKEAYPGSPLTAQVDFGRGKALDGLGDTREAARAY 220 >gi|113475812|ref|YP_721873.1| hypothetical protein Tery_2167 [Trichodesmium erythraeum IMS101] gi|110166860|gb|ABG51400.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101] Length = 1014 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 46/118 (38%), Gaps = 9/118 (7%) Query: 53 DVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + R++ YE+A+ ++Q + A + + + P + L + Y YQ Sbjct: 250 ETESSRQLFYEEAIYLHQQQQWQLAEKKYQELLLWQPNNSL---VWLQLGVLYYQIENYQ 306 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Q+ S + + P S Y YY G+ + I + + + ++ ++ Y Sbjct: 307 QSISAISKSLEIEPSS----YGYYYQGLG-LEKINQIEQAIASHQQAIKLDINFIDPY 359 >gi|327403594|ref|YP_004344432.1| hypothetical protein Fluta_1602 [Fluviicola taffensis DSM 16823] gi|327319102|gb|AEA43594.1| hypothetical protein Fluta_1602 [Fluviicola taffensis DSM 16823] Length = 191 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 27/66 (40%), Gaps = 3/66 (4%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A+ ++Q + +A +F+ P++ G+Y A + + Y+ Sbjct: 110 EAIDAFEKQEYQEAIRFFSLA---APYSKYDIDIYEKRGICYLKMGQYIDALADFDYYLI 166 Query: 123 QYPESK 128 PE++ Sbjct: 167 HNPENE 172 >gi|284923560|emb|CBG36655.1| cellulose synthase operon protein C (TPR-repeat-containing protein) [Escherichia coli 042] Length = 1140 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 80/235 (34%), Gaps = 34/235 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 426 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 482 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 483 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 539 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198 Q + + +V R ++ ++ A G+ A ++ + Sbjct: 540 RAQWS-----SNIQELVNRLQSNQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLAD 594 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 595 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 646 Score = 35.9 bits (82), Expect = 6.5, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 339 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 395 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 396 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 441 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 442 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 490 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 491 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 520 >gi|251778908|ref|ZP_04821828.1| TPR-repeat-containing protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083223|gb|EES49113.1| TPR-repeat-containing protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 423 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 9/122 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K + QN+ KA F++ + + + A + +A L E Y Sbjct: 308 YGKGMEEFNIQNYEKANIEFSKAYDYSEGSYLKEHIMFYKAVTLEQLNNFDEAIKLYELY 367 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +YP+ D V Y + + + R + + Y +++ + ++ S Y Sbjct: 368 YAEYPKGSYADNVLYNLSLMFNNTDR---------EKSIYYANKLRDDFSESIYFNETIN 418 Query: 181 YV 182 + Sbjct: 419 KI 420 >gi|284037963|ref|YP_003387893.1| TIR protein [Spirosoma linguale DSM 74] gi|283817256|gb|ADB39094.1| TIR protein [Spirosoma linguale DSM 74] Length = 824 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 10/74 (13%), Positives = 23/74 (31%), Gaps = 18/74 (24%) Query: 77 YEYFNQCSRDFPFAGVARKSLLMSA-FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 E + + + +LL A + Y ++A + +I Y Sbjct: 691 IENLEKINTN----KAKEMALLSQADYDYYINNDPEEALNTIRRFIYLY----------- 735 Query: 136 LVGMSYAQMIRDVP 149 G++Y + + Sbjct: 736 --GLTYYVITKKFD 747 >gi|321252159|ref|XP_003192308.1| peroxisome targeting sequence binding protein [Cryptococcus gattii WM276] gi|317458776|gb|ADV20521.1| Peroxisome targeting sequence binding protein, putative [Cryptococcus gattii WM276] Length = 799 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 38/113 (33%), Gaps = 10/113 (8%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCS 84 + + G + + D +L ++ +Y + S+A +Y++Q Sbjct: 641 VALGVLFNMSGGEDYSKAEDCFLAALAVRPEDWLLYNRLGATLANSGRSSEAIQYYHQAL 700 Query: 85 RDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV--DYVY 134 P F ++L + G+YQ AA + + + Y Y Sbjct: 701 TLHPSF----VRALFNLGIAYMNLGQYQAAAQSILDALRL--QHSGASEAYAY 747 >gi|317484802|ref|ZP_07943698.1| tetratricopeptide [Bilophila wadsworthia 3_1_6] gi|316923932|gb|EFV45122.1| tetratricopeptide [Bilophila wadsworthia 3_1_6] Length = 282 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 18/124 (14%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--LMSAFVQYSA 107 S TD +Y KA+ + A +R+ P A+ +L +M A Sbjct: 125 SGTDAASPEVLYNKALAMYQMGLTDDAGTDLGTYAREHPNDAEAQNALGVVML-----RA 179 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G Y A + + I P + +Y YY +V +Q+ K + +R V Sbjct: 180 GNYASAKAHLDRAIALRP--EQGEY-YYNRA--------NVLKEQKEFKAAIDDYTRAVA 228 Query: 168 RYTN 171 + Sbjct: 229 FIPD 232 >gi|300716934|ref|YP_003741737.1| hypothetical protein [Erwinia billingiae Eb661] gi|299062770|emb|CAX59890.1| Conserved uncharacterized protein [Erwinia billingiae Eb661] Length = 389 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 62/189 (32%), Gaps = 30/189 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ + +A E F+Q + F A + L+ + + +A + E + Sbjct: 114 GRDYMAAGFYDRAEEMFSQLVDETDFRVGALQ-QLLII--HQATSDWPKAIEVAERLVKL 170 Query: 124 YPESKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + + ++ ++ ++ M D+ + S + AR + Sbjct: 171 GKDKQRMEIAHFYCELALQAMGSDDLDRAMGLLRKG------------ESADRQSARVSI 218 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 +GR +A GEY A+ Q VL D E E + L Y L Sbjct: 219 MMGRIHMAK------------GEYAKAVGHLQRVLE--QDKELVSETLEMLETCYQQLDQ 264 Query: 243 MDEAREVVS 251 + E + Sbjct: 265 PNAWAEYLK 273 >gi|289615867|emb|CBI57373.1| unnamed protein product [Sordaria macrospora] Length = 624 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 45/134 (33%), Gaps = 20/134 (14%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92 +G ++ D + Y +A L + F++A + + + DF F+ Sbjct: 387 LGHPDKAEEDFNKAIEQNAEDPDIYYHRAQLHFIKGEFAEAAKDYQKSIDLDSDFIFSH- 445 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + QY G + + + + ++ +V Y YY ++ DQ Sbjct: 446 -----IQLGVTQYKMGSIASSMATFRRCMKNFDQTPDV-YNYY----------GELLLDQ 489 Query: 153 RATKLMLQYMSRIV 166 + ++ + Sbjct: 490 NKFQEAIEKFDTAI 503 >gi|198275712|ref|ZP_03208243.1| hypothetical protein BACPLE_01887 [Bacteroides plebeius DSM 17135] gi|198271341|gb|EDY95611.1| hypothetical protein BACPLE_01887 [Bacteroides plebeius DSM 17135] Length = 721 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 8/70 (11%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCS--RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + + +N+ +A + F + P K+ + + +GKY++A + Sbjct: 589 LMQTGQCLAALKNYPEAIKVFYKVEFLETHP-----EKARRAIGWCYFMSGKYEEAVRMY 643 Query: 118 EEYITQ-YPE 126 E+ + P+ Sbjct: 644 EKLLALENPQ 653 >gi|85714946|ref|ZP_01045931.1| peptidase C14, caspase catalytic subunit p20 [Nitrobacter sp. Nb-311A] gi|85698143|gb|EAQ36015.1| peptidase C14, caspase catalytic subunit p20 [Nitrobacter sp. Nb-311A] Length = 725 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 20/46 (43%), Gaps = 2/46 (4%) Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + +T + R ++RY +SP + + V R+ A +E Sbjct: 352 FDRLKDSTDQA--ALKRFIKRYPDSPLALQVQHRLEVLRSAAAERE 395 >gi|319796161|ref|YP_004157801.1| lipoprotein [Variovorax paradoxus EPS] gi|315598624|gb|ADU39690.1| putative lipoprotein [Variovorax paradoxus EPS] Length = 221 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 9/104 (8%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 A FL G ++ D + + + A + S A + + + D P Sbjct: 6 IAATSFLSGC--TTTPDAAVAQSAEAFNKSLAEADAAAAAATGDKSAAIRQYQKIATDNP 63 Query: 89 --FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 +R + + ++ G+Y A S EE + + P S+ Sbjct: 64 TRGEPWSRIAQI-----YFNEGRYSLAISSAEETLRRDPTSRQA 102 >gi|307297487|ref|ZP_07577293.1| tetratricopeptide TPR_2 repeat protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306916747|gb|EFN47129.1| tetratricopeptide TPR_2 repeat protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 356 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 35/249 (14%), Positives = 75/249 (30%), Gaps = 55/249 (22%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 D+ +D+ D E+ K +FL+ + + ++ + S L++A+ Sbjct: 120 DLLMDANVDKATVCEL--KGSIFLESGDEEEGIKWLQ--------NALKIDSSLVTAYSF 169 Query: 105 -----YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y+ G + AA + I P+ + M+ D + L Sbjct: 170 LGQTFYNRGDFDSAADCWQREIAASPDH-----------LVTYFMLTDAYINAGRMDEAL 218 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--------------EI------GRY 199 + + +R +S + + ++ E+ I + Sbjct: 219 NVLKDLSKRDPDSILT---KVEMAELYEKMGNIEMRRIVEDEVLKTKPVYINDVEPWAKI 275 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 K Y L D E LV +++ DEA+ ++ + + Sbjct: 276 QFKHSNYDVVEEVATNFLKENPD---RPELKMLLVVSHMKKGQCDEAKRLLKEFEN---E 329 Query: 260 GYWARYVET 268 W Y + Sbjct: 330 QVWYFYGKK 338 >gi|296211379|ref|XP_002752387.1| PREDICTED: RNA polymerase II-associated protein 3-like [Callithrix jacchus] Length = 744 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 46/143 (32%), Gaps = 21/143 (14%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + + EK + K+ + +A + + + P+ V A + K+ Sbjct: 208 DSQKALVLKEKGNKYFKQGKYDEAIDCYTEGMDADPYNPVLPT---NRASAYFRLKKFAV 264 Query: 113 AASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A S I N Y Y G + + + + + R++E Sbjct: 265 AESDCNLAIAL-----NKSYTKAYSRRGAARFALQK--------LEEAKKDYERVLELEP 311 Query: 171 NSPYVKGARFYVTVGRNQLAAKE 193 N+ A + LA+KE Sbjct: 312 NN---FEATNELRKINQALASKE 331 >gi|288818802|ref|YP_003433150.1| tetratricopeptide repeat family protein [Hydrogenobacter thermophilus TK-6] gi|288788202|dbj|BAI69949.1| tetratricopeptide repeat family protein [Hydrogenobacter thermophilus TK-6] gi|308752388|gb|ADO45871.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobacter thermophilus TK-6] Length = 545 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 77/193 (39%), Gaps = 32/193 (16%) Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + + + +++ +L A +G+ ++A ++ E + P++ + Y Y++ Sbjct: 103 KALSALEEGYRLLPKSKEIMLFLADEYLRSGENKKAKAVIENLAKESPDNP-LPY--YML 159 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 Y + +L + Y+ + ++ ++ A + +G Sbjct: 160 ARIYLS--------EGNKELAIHYLEKSLQ-----------------IKSSFEAGFITLG 194 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 Y + GEY A ++ VL D + A+ RL YV ++EA+++ + Y Sbjct: 195 SIYEESGEYTKAEQLYKDVLKTSPDNKV---ALERLANLYVLTNRLEEAQDIYERLARLY 251 Query: 258 PQGYWARYVETLV 270 P+ +A Y LV Sbjct: 252 PEENYA-YQYALV 263 >gi|240850065|ref|YP_002971458.1| tetratricopeptide repeat protein [Bartonella grahamii as4aup] gi|240267188|gb|ACS50776.1| tetratricopeptide repeat protein [Bartonella grahamii as4aup] Length = 564 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 85/273 (31%), Gaps = 58/273 (21%) Query: 6 GRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAV 65 GR IF+ ++ LY F +A + + +Y Y Y+ Sbjct: 291 GRIARIFKQLSFALYPQNDATLFQLAHISAKLSDPHKAIKLYRALSPKSPY----YKDGQ 346 Query: 66 LFL-----KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK--------YQQ 112 L L N+ +A + + FP +++L++ Y Sbjct: 347 LHLAFLLANNNNYKEAIKLLTLLNEKFP----NDRNILITLVAFYMQDNKFLEAIKTLDT 402 Query: 113 AASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + + + D+ ++Y G+++ ++ + + + +E + N Sbjct: 403 AIAQIKNFQQD-------DWKLFYQRGIAFERL--------KQWPKAEIDLRKSLEFFPN 447 Query: 172 SP----YVKGA----------RFYVTVGRNQLAAKEVEI----GRYYLKRGEYVAAIPRF 213 P Y+ + + + L A I G Y K EY A+ Sbjct: 448 QPQVLNYLAYSLVERGEKLEESLRMLQKASALQAHNSHILDSLGWAYYKLKEYNKAVQIL 507 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 + + + + L +AY + EA Sbjct: 508 ENAVRLQPEDPTLND---HLGDAYWKVGRKREA 537 >gi|187918399|ref|YP_001883962.1| tetratricopeptide repeat family protein [Borrelia hermsii DAH] gi|119861247|gb|AAX17042.1| tetratricopeptide repeat family protein [Borrelia hermsii DAH] Length = 211 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 25/67 (37%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + + + A ++F + K +++A Y +Y +A E + Sbjct: 97 GEAYFFQGQYKNALKHFQKYISLGSNGARIAKVYILTADSFYKLERYNEADFAYENALRF 156 Query: 124 YPESKNV 130 P ++N+ Sbjct: 157 LPNNQNI 163 >gi|91783675|ref|YP_558881.1| hypothetical protein Bxe_A2139 [Burkholderia xenovorans LB400] gi|91687629|gb|ABE30829.1| Hypothetical TPR domain protein [Burkholderia xenovorans LB400] Length = 530 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 22/79 (27%), Gaps = 15/79 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVA----RKSLLMSAFVQY-------S 106 ++ L+ N+ A E F+ + A S L +A + Sbjct: 365 QQGRWNLEHGNYKAAAERFDDPMWKGRAQYLAGDYAAALETFSRLKTAQAYFYIGNTLAH 424 Query: 107 AGKYQQAASLGEEYITQYP 125 Y A + + P Sbjct: 425 LDDYAGAIKAYDNALKLQP 443 >gi|49082798|gb|AAT50799.1| PA4327 [synthetic construct] Length = 269 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 4/55 (7%) Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 Y +G+ Y DQR Y R+V + + + A+ + R + Sbjct: 94 LYQIGLIYMSRYN----DQRDDAKATDYFQRVVREFPGTHAAEHAQARLLAMRQR 144 >gi|41408601|ref|NP_961437.1| EmbR_2 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396959|gb|AAS04820.1| EmbR_2 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 380 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 8/60 (13%), Positives = 18/60 (30%), Gaps = 7/60 (11%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGEE 119 +A + +R+ P + + LM+A+ Y + A + Sbjct: 170 AQAEAEIACGRAFSVITELESLTREHP---YREQLWAQLMTAY--YLTDRQSDALAAYRR 224 >gi|332291970|ref|YP_004430579.1| Tetratricopeptide repeat protein [Krokinobacter diaphorus 4H-3-7-5] gi|332170056|gb|AEE19311.1| Tetratricopeptide repeat protein [Krokinobacter diaphorus 4H-3-7-5] Length = 254 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 7/79 (8%), Positives = 22/79 (27%), Gaps = 3/79 (3%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T + +++E+ F +A + + + + A + Sbjct: 20 TTAQTPEQLFEQGNSHYANGQFQEAIDAYKKVLDT---NQESASIYYNLANAHFKLNNVA 76 Query: 112 QAASLGEEYITQYPESKNV 130 + E+ P + + Sbjct: 77 PSIYYYEKAKRLAPADQEI 95 >gi|332291115|ref|YP_004429724.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter diaphorus 4H-3-7-5] gi|332169201|gb|AEE18456.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter diaphorus 4H-3-7-5] Length = 261 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 7/52 (13%), Positives = 18/52 (34%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 D R +++ V + A ++ + ++ + A + L Q Sbjct: 207 DFTTPRFLFKAGVAAIDLGKMDAAVKHLTRIKEEYATSEYASQVDLYLGRAQ 258 >gi|293412960|ref|ZP_06655628.1| cellulose synthase operon protein C [Escherichia coli B354] gi|291468607|gb|EFF11100.1| cellulose synthase operon protein C [Escherichia coli B354] Length = 1161 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 78/236 (33%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 447 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 503 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 504 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 560 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + + +V R S V + G+ A ++ + Sbjct: 561 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 614 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 615 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 667 Score = 36.2 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 360 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 416 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 417 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 462 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 463 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 511 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 512 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 541 >gi|298491174|ref|YP_003721351.1| Lytic transglycosylase catalytic ['Nostoc azollae' 0708] gi|298233092|gb|ADI64228.1| Lytic transglycosylase catalytic ['Nostoc azollae' 0708] Length = 729 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 74/221 (33%), Gaps = 38/221 (17%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA- 113 + + +Y A ++ +A + Q + FP A +LL A + A Sbjct: 259 KTAKNLYRTARGLQLDKKRDQAVVLYKQQVQQFPTAEETGTALLRLA---------EIAP 309 Query: 114 ----ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 S ++ I ++P K + + + D ++ + ++ +Y Sbjct: 310 GKGVISYLDQIINKFP--KQAP-----SALVKKAQLLETLKDNQSANTAWKL---LLGKY 359 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 +NS R+ + R+ K +YV A Q + + A A Sbjct: 360 SNSEEAAEYRWKTALNRS--------------KSRDYVGAWQWAQPIAIENPKSILAPRA 405 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + + L EA + ++PQ Y+A +++ Sbjct: 406 SFWVGKWATMLGKQQEAHNAYKYVLSQFPQSYYAWRSASIL 446 >gi|254411241|ref|ZP_05025018.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196181742|gb|EDX76729.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 906 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 15/154 (9%), Positives = 41/154 (26%), Gaps = 9/154 (5%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQC 83 + C +++ + + + ++ ++ A Sbjct: 35 VFLAVLTFCVTTLTHLLATQATLPPTAQPSISPQTLVQQGKTHYDAGQYTDAINLLQQAA 94 Query: 84 SRDFPFAGVARKS--LLMSAFVQYSAGKYQQAASLGEEYITQ--YPESKNVDYVYYLVGM 139 R++ L A G++Q A + ++ + + L G Sbjct: 95 DAFQSQGDRLRQAMTLTNLALAYQQLGQWQDAQDTITTSLQLLDNAQTPDT---WTLQGA 151 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + + + Q + L + V YT + Sbjct: 152 A-FNVQGQLYLAQGNLEAALDSFTTAVNSYTQTE 184 >gi|150401175|ref|YP_001324941.1| TPR repeat-containing protein [Methanococcus aeolicus Nankai-3] gi|150013878|gb|ABR56329.1| Tetratricopeptide TPR_2 repeat protein [Methanococcus aeolicus Nankai-3] Length = 723 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 32/90 (35%), Gaps = 9/90 (10%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS---------LLMSAFVQYSA 107 +++ + + + +A + + + P A+ L + Y Sbjct: 14 DKDLVNEGNKLYFKGKYLEAIDKYLEAISINPTNKTAKLKIEASNKIICLYKDISLNYQN 73 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLV 137 G Y++ L + I P+ + + Y+ Y + Sbjct: 74 GDYEKCIPLCKNIIQLNPKDQKIKYMEYRI 103 >gi|134133313|ref|NP_001077052.1| RNA polymerase-associated protein CTR9 homolog [Danio rerio] gi|126635345|dbj|BAF48400.1| RNA polymerase-associated protein Ctr9 homolog [Danio rerio] Length = 1160 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 99/276 (35%), Gaps = 39/276 (14%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 A L RA E + ++T +++A + E + +Y + + + + Y Sbjct: 476 ASLERAKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYL 535 Query: 63 K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + + NF +A ++F + ++D P + L A ++ E Sbjct: 536 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 589 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSPY 174 + Q P ++N Y +G + Q + D+ R L +++ + + Y Sbjct: 590 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLY 648 Query: 175 VKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVL 217 + Y R+ A +E + + Y+++ +Y++A+ ++ L Sbjct: 649 AANGIGAVLAHKGYFREARDVFAQVREATAEISDVWLNLAHIYVEQKQYISAVQMYENCL 708 Query: 218 A---NYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 Y + E + L A + E ++ + Sbjct: 709 KKFYKYQNT----EVLLYLARALFKCGKLQECKQTL 740 >gi|220928054|ref|YP_002504963.1| hypothetical protein Ccel_0602 [Clostridium cellulolyticum H10] gi|219998382|gb|ACL74983.1| Tetratricopeptide TPR_2 repeat protein [Clostridium cellulolyticum H10] Length = 586 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 67/219 (30%), Gaps = 37/219 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 LF+ +S+A + F + A + +Y+ A + ++ Sbjct: 332 GKLFMSVGQYSEASKVFKTYITINGVDYTGHY------NLAECYFENKEYKNAIAEYKQT 385 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I+ +S + +G+ Y + T+ + +++ N Sbjct: 386 ISLNQKSHES---LFKLGLIYDKTDE--------TEKAIDCYRAVIQLMPNFIDAYN-NL 433 Query: 181 YVTVGR-----NQLAAKEVEIG------RYYLKRGEYVAAIPRFQLVLANYSDA----EH 225 + + LAA I R Y G + I R++ ++ A Sbjct: 434 GIVFAKSQRHVESLAAYTAGIKLNPDNFRLYFNMGVVLFEIKRYEDSADAFARAVKLNPD 493 Query: 226 AEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWA 263 ++ L + L DEA + + E+ +G Sbjct: 494 DKDVYYYLGASLTELKQYDEAIKAYGRALDEKMEEGELY 532 >gi|114704715|ref|ZP_01437623.1| hypothetical protein FP2506_07261 [Fulvimarina pelagi HTCC2506] gi|114539500|gb|EAU42620.1| hypothetical protein FP2506_07261 [Fulvimarina pelagi HTCC2506] Length = 390 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 9/97 (9%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 ++ + +A VGW+R S + + Y A ++E + A E F Sbjct: 31 VSVVLIVILATGAYVGWQRYS--------IAQANATGDRYLAAQDLVREGDIDGAIEAFR 82 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + D + + A + AG+ + A + E Sbjct: 83 AIAEDGS-GAYPELAQMSIANAEAEAGRNEDAIASYE 118 >gi|116052361|ref|YP_792672.1| hypothetical protein PA14_56210 [Pseudomonas aeruginosa UCBPP-PA14] gi|115587582|gb|ABJ13597.1| hypothetical protein PA14_56210 [Pseudomonas aeruginosa UCBPP-PA14] Length = 268 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 4/55 (7%) Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 Y +G+ Y DQR Y R+V + + + A+ + R + Sbjct: 94 LYQIGLIYMSRYN----DQRDDAKATDYFQRVVREFPGTHAAEHAQARLLAMRQR 144 >gi|297273345|ref|XP_001115976.2| PREDICTED: cell division cycle protein 27 homolog isoform 1 [Macaca mulatta] Length = 790 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 38/190 (20%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 552 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 601 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTNSPYVKGA 178 N +Y +GM Y + + + + L + + S Sbjct: 602 N---AWYGLGMIYYKQEK-FSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDT 657 Query: 179 RFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 V +N L +Y +A+ + + + + Sbjct: 658 LNKAIVIDPKNPLCK--FHRASVLFANEKYKSALQELEELKQIVPKESLVY---FLIGKV 712 Query: 237 YVALALMDEA 246 Y L A Sbjct: 713 YKKLGQTHLA 722 >gi|291570132|dbj|BAI92404.1| probable transglycosylase [Arthrospira platensis NIES-39] Length = 730 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 37/110 (33%), Gaps = 12/110 (10%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY--SAGKYQQAASLGEEYITQYPESK 128 + A + + + A + L Q +AG+ A+ + + + P+S+ Sbjct: 345 GSTETASQSRQLLLSQYSDSEAA--AQLRWTLAQQGATAGRLDIASEWARQLVNKNPDSE 402 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +++G Q +K + ++ RY S Y A Sbjct: 403 LAPQATFMLG--------RWARQQGNSKDATKAFEYLLARYPESYYAWRA 444 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 64/214 (29%), Gaps = 33/214 (15%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARKSLLMSAFVQYSAGK 109 + R +Y A ++ + + FP A + A + Sbjct: 256 KTPRNMYRHARGLWLGGKIPESRRAYQELIAAFPTQTDPGGEDAGLGRIRLA----RLVE 311 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 ++A L + + +P ++ +T+ Q ++ +Y Sbjct: 312 PREALPLLNQVVENFPNH--AAEAVLDRANVLDKL--------GSTETASQSRQLLLSQY 361 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 ++S R LA + GR A + ++ D+E A +A Sbjct: 362 SDSEAAAQ-------LRWTLAQQGATAGRL-------DIASEWARQLVNKNPDSELAPQA 407 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 L +A + + RYP+ Y+A Sbjct: 408 TFMLGRWARQQGNSKDATKAFEYLLARYPESYYA 441 >gi|291567424|dbj|BAI89696.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 806 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 28/77 (36%), Gaps = 3/77 (3%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS D + + E+ + +K++ + +A + P K+ + Sbjct: 2 SSTDRSKEELNPDLNSLEL---GLAAIKQKQYQQAIALLEPIADSQPHTKAGLKAQIGLV 58 Query: 102 FVQYSAGKYQQAASLGE 118 +G+ +A SL + Sbjct: 59 KAYDRSGQSDRAISLCQ 75 >gi|291279941|ref|YP_003496776.1| hypothetical protein DEFDS_1561 [Deferribacter desulfuricans SSM1] gi|290754643|dbj|BAI81020.1| hypothetical protein [Deferribacter desulfuricans SSM1] Length = 249 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 52/146 (35%), Gaps = 32/146 (21%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G + A ++ I P N+ VYY +G++Y M + +Y + Sbjct: 109 GDLENAILNWKK-ILNDPTYPNIPLVYYNIGLAYYNMND--------YEEAKKYFKSSIR 159 Query: 168 RYTNSPYVKGARFYVTVGRNQ---LAAKE-----------------VEIGRYYLKRGEYV 207 + + + + N+ +A E +++G +Y +Y Sbjct: 160 A---NRFFVNSYLMLYEIYNKEMNMAEAEKILKKAVDNNPASRVLMLKLGEHYYNEKKYN 216 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARL 233 A F+ ++ + +E A++A L Sbjct: 217 DAASVFEDIIIKFPKSEEAKKAATYL 242 >gi|284054414|ref|ZP_06384624.1| hypothetical protein AplaP_23478 [Arthrospira platensis str. Paraca] Length = 144 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 28/77 (36%), Gaps = 3/77 (3%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS D + + E+ + +K++ + +A + P K+ + Sbjct: 2 SSTDRSKEELNPDLNSLEL---GLAAIKQKQYQQAIALLEPIADSQPHTKAGLKAQIGLV 58 Query: 102 FVQYSAGKYQQAASLGE 118 +G+ +A SL + Sbjct: 59 KAYDRSGQSDRAISLCQ 75 >gi|268326191|emb|CBH39779.1| conserved hypothetical secreted protein, containing tetratricopeptide repeats [uncultured archaeon] Length = 460 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 24/189 (12%), Positives = 48/189 (25%), Gaps = 50/189 (26%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K I + L+G + +++ + N+ A F Sbjct: 2 KITRRTALGITLIVLIGLTSWG--------LAGALEEQQYINQGKDEYNRGNYDAAIYLF 53 Query: 81 NQCSRDFPFAGV----------------------ARKSLLMS----AF-----VQYSAGK 109 N+ P ++ L S A+ Y G Sbjct: 54 NKAVELNPDNEYLYNDLGLCYVALDDSDLAIPEFSKAIELNSDCVEAYYNRGLAYYGQG- 112 Query: 110 YQQAASLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRD----VPYDQRATKLMLQYM 162 A ++ I P + + YY G++Y + +R P + Sbjct: 113 TSGAPDAISDFTKAIELDPGNVD---AYYNRGLAYNKQVRGGEPFTPEHMESYGKARADF 169 Query: 163 SRIVERYTN 171 +++E Sbjct: 170 DKVLELDPE 178 >gi|268317515|ref|YP_003291234.1| Tetratricopeptide TPR_4 [Rhodothermus marinus DSM 4252] gi|262335049|gb|ACY48846.1| Tetratricopeptide TPR_4 [Rhodothermus marinus DSM 4252] Length = 607 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 7/126 (5%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +A L + + A + N +D +A L+ A + G+ +A +L E+ Sbjct: 485 YAQARLLMAQNQPEAALDSLNVLQQDVGAHPIADDVTLLRARLLRRLGRPTEALALLLEF 544 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 +YP S L S + R D R L +R++ + SP + R Sbjct: 545 PLRYPRSP-------LRDQSLYEAARIQEEDLRDHAAALDTYTRLLTEFPGSPLIPEVRT 597 Query: 181 YVTVGR 186 + R Sbjct: 598 RIRNLR 603 >gi|196232460|ref|ZP_03131313.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] gi|196223532|gb|EDY18049.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] Length = 792 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 75/271 (27%), Gaps = 50/271 (18%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 T+ A+ VG + + D + + A L +A EY + Sbjct: 39 TLHLLGALAQQVGRTEMAIEFMRQAIAADPNHAAALSNLAATLLAGGRAGEAAEYARRAV 98 Query: 85 RDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESKNVDYVYYLV 137 P A Y+ G + ++A + + P + Sbjct: 99 EVAPG----------FADAHYNLGAVLAELGQMEEALASYRRALEIQPTHAVAE------ 142 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 + ++ + R + R ++ Y A + V ++ + I Sbjct: 143 -----NNLGNILRELRRLDEAIAAYRRAIQLQP--AYA-DAHNNLGVALSEQGKSDEAIA 194 Query: 198 RY-------------YLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVAL 240 Y + G + A R+ + Y + + L EA V L Sbjct: 195 AYGRALELKPDGNAVHANLGNALRASGRYAEAVVAYRRSLQSSPARLDICQGLGEALVLL 254 Query: 241 ALMDEAREVVSLIQERYPQGY--WARYVETL 269 DEA EV LI P WA L Sbjct: 255 GRFDEAGEVFRLIVRCNPDDPEAWASLANVL 285 >gi|171913013|ref|ZP_02928483.1| hypothetical protein VspiD_17575 [Verrucomicrobium spinosum DSM 4136] Length = 866 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 24/175 (13%), Positives = 62/175 (35%), Gaps = 41/175 (23%) Query: 96 SLLMSAFVQYSAGKYQ-QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 S L+ + A K+ A + ++++ ++P + + ++ ++ D+P +A Sbjct: 495 SQLLLEKALHLAAKHDPTAEAALQDFLREHPTHPRAVEAH--LALAELCLL-DIPVRAKA 551 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--------------------- 193 L L I G + + R L E Sbjct: 552 ASLALDVAKEIPGL------ADGWKEKIDYTRVWL--YEAAEDFPALTKVGIQYLETWRT 603 Query: 194 --------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 +++ + Y + ++ A +F+ ++ +++ +AE A +A +A+ Sbjct: 604 SQRRDQVRMKVAQAYYRMDDFTNAGTQFEELVEEQTESPYAEVAQFYAGKAALAM 658 >gi|172036154|ref|YP_001802655.1| hypothetical protein cce_1239 [Cyanothece sp. ATCC 51142] gi|171697608|gb|ACB50589.1| hypothetical protein cce_1239 [Cyanothece sp. ATCC 51142] Length = 155 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 7/71 (9%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASL 116 E+ ++ FL+ NF KA E + +++P FA R+++L +S KY++A Sbjct: 42 ELLRRSQSFLEAGNFQKAEELLTETIKNYPDFAEAWNRRAVL-----YFSLEKYEKAKED 96 Query: 117 GEEYITQYPES 127 ++ I P Sbjct: 97 CQQVIRLIPYH 107 >gi|220922451|ref|YP_002497753.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium nodulans ORS 2060] gi|219947058|gb|ACL57450.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium nodulans ORS 2060] Length = 1022 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 16/114 (14%), Positives = 38/114 (33%), Gaps = 14/114 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + F + + +A +NQ R P + +A Y G Y++A + + Sbjct: 65 NRGFTFRSKGEYDRAIADYNQALRLDPRSVIAYN---NRGDAFYHKGDYERAIADYNRAL 121 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 P+ VY G ++ + + + ++ ++ N + Sbjct: 122 QLDPKHPI---VYNNRGFAF--------HGKGEYDRAIADYNQALQLDPNYTFA 164 >gi|189426262|ref|YP_001953439.1| hypothetical protein Glov_3213 [Geobacter lovleyi SZ] gi|189422521|gb|ACD96919.1| Tetratricopeptide TPR_2 repeat protein [Geobacter lovleyi SZ] Length = 639 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 63/210 (30%), Gaps = 17/210 (8%) Query: 61 YEKAVLFLKE-----QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 Y +A L L + N +A E + + + P + L A + A Sbjct: 374 YAEARLKLADIRLGRGNTQEAVEQYVEFLKLKPESA---DIHLKLARIFVKNKNLNLAEE 430 Query: 116 LGEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + + P++ + Y + + + + + + +V Y Sbjct: 431 SYKAVLKLAPDNPEANRELAAVYRAKGATDKAVEHYTKALELQEEDNESRNALVAIYVKD 490 Query: 173 PYVKGARFYVTVGRNQL---AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 + A ++G Y + EY AI ++ D A Sbjct: 491 KKYDELAELLQEAVELAPDDANNHYKLGLIYDFKKEYDNAIASYKKAAELKPD---HARA 547 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQ 259 + L Y+ + EARE + ++ P Sbjct: 548 LHALGRVYMKTGRLSEAREALEAARKADPN 577 >gi|91203625|emb|CAJ71278.1| putative tpr repeat protein [Candidatus Kuenenia stuttgartiensis] Length = 647 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 48/143 (33%), Gaps = 26/143 (18%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESK----NVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + Y+ G +A E I P N+ Y L GM Q Sbjct: 434 LGYFYYNNGLIDKAIQAFEGSIQAMPTHPKAHSNLGAAYSLKGM------------QDKA 481 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY--LKRGEYVAAIPRF 213 LQ+ R+ E+Y A + + + ++ I Y LK Y A Sbjct: 482 IEELQFAVRLREQYP------EAHNNLGLLYKRKGMPDMAINEYVAALKTNPYYADAH-- 533 Query: 214 QLVLANYSDAEHAEEAMARLVEA 236 + + Y D EEA++ L +A Sbjct: 534 NNLGSVYIDTGRYEEALSELEKA 556 >gi|85859751|ref|YP_461953.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB] gi|85722842|gb|ABC77785.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus SB] Length = 277 Score = 38.2 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 59/176 (33%), Gaps = 35/176 (19%) Query: 61 YEKAVLFL-----KEQNFSKAYEYFNQCSRD--FPFAGVARKSLLMSAFVQYSAGKYQQA 113 Y +A FL + + +A E F + + + A + Y G Y A Sbjct: 119 YSEAYNFLGVIYSSMEKWDQAIEAFEKALSNILYDTPAYAH---YNMGWAYYKKGDYGSA 175 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 E + Q P++ ++ + + V Q T L+++ + + Sbjct: 176 LKQYELALVQDPDTVDLP--------LLEKNMGIVLLAQGRTADALKHLQKSIALMP--- 224 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 LA +GR Y+++ A FQ V+ D E AE++ Sbjct: 225 --------------SLAESHYWLGRCYIEQKNLEKAEAAFQQVMKLAPDTEWAEKS 266 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 14/125 (11%), Positives = 41/125 (32%), Gaps = 11/125 (8%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + K+ ++ A + + P V + G+ A ++ Sbjct: 160 YNMGWAYYKKGDYGSALKQYELALVQDPDTVDLPLLEKNMGIVLLAQGRTADALKHLQKS 219 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I P ++ +Y +G Y + Q+ + ++++ ++ + + +R Sbjct: 220 IALMP---SLAESHYWLGRCYIE--------QKNLEKAEAAFQQVMKLAPDTEWAEKSRG 268 Query: 181 YVTVG 185 + Sbjct: 269 KIEEL 273 Score = 35.9 bits (82), Expect = 7.0, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 87/299 (29%), Gaps = 88/299 (29%) Query: 5 LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64 + R + I WA+ + + S+A C W ++ + Sbjct: 19 MSRKLSIITLWAW------IGLIISVAGCATSPWNQEQADIHM--------------NIG 58 Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ-AASLGEEYITQ 123 +++ ++ A + Q + + A Y Q A + ++ + Sbjct: 59 NAYIQSGKYNSALKELLQAKKL---GKPNPRVHYSLAVSYYYGKGLNQLAIAELKKAVNL 115 Query: 124 YPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + DY Y +G+ Y+ M + +DQ ++ + + Sbjct: 116 -----DTDYSEAYNFLGVIYSSMEK---WDQ-----AIEAFEKALS-------------- 148 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA------------------ 223 + + A +G Y K+G+Y +A+ +++L L D Sbjct: 149 -NILYDTPAYAHYNMGWAYYKKGDYGSALKQYELALVQDPDTVDLPLLEKNMGIVLLAQG 207 Query: 224 ----------------EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 E+ L Y+ +++A + + P WA Sbjct: 208 RTADALKHLQKSIALMPSLAESHYWLGRCYIEQKNLEKAEAAFQQVMKLAPDTEWAEKS 266 >gi|332663484|ref|YP_004446272.1| hypothetical protein Halhy_1507 [Haliscomenobacter hydrossis DSM 1100] gi|332332298|gb|AEE49399.1| Tetratricopeptide TPR_1 repeat-containing protein [Haliscomenobacter hydrossis DSM 1100] Length = 259 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 39/104 (37%), Gaps = 13/104 (12%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSAG 108 ++ + ++ ++A ++ N+ A + + + AG +L + AG Sbjct: 25 NLAAAQSPTQIAQQAQESYQQGNYPAAVQAYKKLIA----AGYHNAALSFNLGNACFRAG 80 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 K +A E+ + P + ++ +++R DQ Sbjct: 81 KLGEAVLYYEKALALKPNDEAT--------LANLELVRGELTDQ 116 >gi|323189323|gb|EFZ74606.1| cellulose synthase operon protein C [Escherichia coli RN587/1] Length = 1157 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 78/236 (33%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + + +V R S V + G+ A ++ + Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|312130253|ref|YP_003997593.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132] gi|311906799|gb|ADQ17240.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132] Length = 657 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 14/119 (11%), Positives = 45/119 (37%), Gaps = 18/119 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLL--MSAFVQYSAGKYQQAASLG 117 Y++ + + +++ A F++ + P + ++ L + ++ ++ Sbjct: 25 YKRGLASFENGHYNLAIREFSKVTELDPLY-----QADLLKKTGDAFRLTNRWAESIPYY 79 Query: 118 EEYITQ-YPESK---NVDYVY-----YLVGMSYAQMI-RDVPYDQRATKLMLQYMSRIV 166 E+ + P S+ + Y + Y Y R P D+ + + + ++ ++ Sbjct: 80 EKVLALPNPASEIYYYLGYAHKSKGEYQKAKEYFSAFARTNPSDRVLAEKVQRELNALL 138 >gi|297182130|gb|ADI18303.1| FOG: tpr repeat-protein [uncultured Chromatiales bacterium HF0200_41F04] Length = 197 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 8/71 (11%), Positives = 25/71 (35%), Gaps = 7/71 (9%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASL 116 ++ +A + +++F + ++ P FA ++++ Y Y + Sbjct: 77 QIMRRAQTAMDKRDFKSSIRLLDKLVAHAPKFAEAWNQRAI-----ALYLVADYDASLRD 131 Query: 117 GEEYITQYPES 127 + + P Sbjct: 132 INQTLALEPRH 142 >gi|288942420|ref|YP_003444660.1| TPR repeat-containing protein [Allochromatium vinosum DSM 180] gi|288897792|gb|ADC63628.1| Tetratricopeptide TPR_2 repeat protein [Allochromatium vinosum DSM 180] Length = 660 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 44/111 (39%), Gaps = 12/111 (10%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ + + +E + +A R P ++ LM+ ++ G+ ++A +L Sbjct: 510 LFRRYLAQAQEGHSEEARRTLETLLRLNPQDNHGARAELMNLYL--RDGEDERALALARR 567 Query: 120 YITQYPESKNVDYVYYLVG--MSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + P+ D Y G ++ ++ R+ + K ++ + RI Sbjct: 568 F----PDDLLADLAY---GEVLALYRLGRE-ERARTVLKTAIRRLPRIPRY 610 >gi|283850638|ref|ZP_06367925.1| cell wall hydrolase/autolysin [Desulfovibrio sp. FW1012B] gi|283573881|gb|EFC21854.1| cell wall hydrolase/autolysin [Desulfovibrio sp. FW1012B] Length = 382 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 21/73 (28%), Gaps = 3/73 (4%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 E+ + L + N +KA + P + + + G +QA Sbjct: 27 DSADELANQGQDALNDGNPAKALPILLEAQAKDPRND---RVEALLGRAYFQQGDARQAL 83 Query: 115 SLGEEYITQYPES 127 + PE Sbjct: 84 HHFTAAVRLNPED 96 >gi|258619927|ref|ZP_05714968.1| fimbrial biogenesis and twitching motility protein, putative [Vibrio mimicus VM573] gi|258587797|gb|EEW12505.1| fimbrial biogenesis and twitching motility protein, putative [Vibrio mimicus VM573] Length = 136 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 10/110 (9%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 FAL + F+++ C V +++ + + R + +L+ + KA E Sbjct: 5 FALGVLFALSGCVTVTETSEAAAQSNPTEMAEARIAL-----GLGYLENGSMIKARENLE 59 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSA-GKYQQAASLGEEYITQYPESKNV 130 + + P + +S L A + A G+ A + + + Q+P++ NV Sbjct: 60 KALQHAP-SYY--RSQLSMAH-YFEAVGESDSARKMYQTALNQHPKNGNV 105 >gi|197120080|ref|YP_002140507.1| TPR domain-containing protein [Geobacter bemidjiensis Bem] gi|197089440|gb|ACH40711.1| TPR domain protein [Geobacter bemidjiensis Bem] Length = 405 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 67/207 (32%), Gaps = 30/207 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + +++++++A + P ++ A + GK +A + + Sbjct: 34 SSGLGYYQKKDYARATGELKRAISMDPTN---TQAYKFLASAYQAQGKTDEAIKTYKNSL 90 Query: 122 TQYPE----SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ-------YMSRIVERYT 170 P N+ G Y Q + +R K + + + Y Sbjct: 91 ALDPTQDSIHTNL-------GNIYLQQ-KKYNLAEREFKDAAKLNPTDTLAPYTLGQLYV 142 Query: 171 NSPYVKGARFYVTVGRNQLAAKE----VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 + A +++A + +G Y K G+Y A+ + + E A Sbjct: 143 QTERYGEAETQFKKV-SRMAPTDPNPYYSLGAVYNKEGKYADAVKQLTQAVKLRPKMEAA 201 Query: 227 EEAMARLVEAYVALALMDEAREVVSLI 253 L AY AL A++ V+ + Sbjct: 202 H---FELGVAYAALGDTTNAQKEVNTL 225 >gi|197118348|ref|YP_002138775.1| TPR domain-containing protein [Geobacter bemidjiensis Bem] gi|197087708|gb|ACH38979.1| TPR domain protein [Geobacter bemidjiensis Bem] Length = 188 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 20/157 (12%), Positives = 49/157 (31%), Gaps = 14/157 (8%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + T + V L + + + +E VL E + +A E Sbjct: 1 MRQATGTYVMLLLVAGLATGDLDPKPQRQPIDQEEYLEADDWFEAGVLMNSEGRYGEAAE 60 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F++ P V+ L Q Y +A + I P+ + Sbjct: 61 AFSKSIALSPGNAVS---WLNLGTAQALTADYPRAIESLKRSIALDPK----------LA 107 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 ++++ + R + ++ + ++E + + Sbjct: 108 LAFSNLGEVCFRIYRY-EEAVEAYTYLLELWPGNANA 143 >gi|91202926|emb|CAJ72565.1| hypothetical protein kustd1820 [Candidatus Kuenenia stuttgartiensis] Length = 645 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 38/202 (18%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 +A + F+ R F A + G +++A + ++ + P+ Sbjct: 433 DSGRLDEAIDEFHHALRL--FENYAE-AHNNLGITYRKKGMHEEAYNEYQKALQLNPDYP 489 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + V+ +G+ Y ++ R L ++ R ++ ++ + N Sbjct: 490 D---VHNNLGVLYTKINRS--------DLAMEEFKRAIK----------SKQMYSDAHNN 528 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-R 247 L G Y GE AI F+ +++ D +A A L AY+ + DEA + Sbjct: 529 L-------GILYAYTGELDLAIESFKNAISSRPD---HPDAYANLGTAYLKKGMYDEAIQ 578 Query: 248 EVVSLIQERYPQGYWARYVETL 269 + + I + + L Sbjct: 579 QFLKAISY---DNQYVKAYYYL 597 Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 27/76 (35%), Gaps = 9/76 (11%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + +LK+ + +A + F + + K+ + ++ G+Y+ Sbjct: 555 DHPDAYANLGTAYLKKGMYDEAIQQFLKAISYDNQY------VKAYYYLSTAYWNKGQYE 608 Query: 112 QAASLGEEYITQYPES 127 +AA ++ P Sbjct: 609 KAAETCRRILSIDPTH 624 >gi|27365657|ref|NP_761185.1| Flp pilus assembly protein TadD [Vibrio vulnificus CMCP6] gi|27361805|gb|AAO10712.1| Flp pilus assembly protein TadD [Vibrio vulnificus CMCP6] Length = 246 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 51/177 (28%), Gaps = 37/177 (20%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 KFA + S+ LVG +S+ + A + + A + Sbjct: 2 KFASKLILSVVSILLVGCAAPASQ----------PSAESLNSLADTAFEYARYDSAKSKY 51 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE-------------YI----TQ 123 Q +P AR LM A + + A S ++ +I Sbjct: 52 QQVLDVYPEQPHAR---LMLARIDLLQDRPHAAQSQLQQLLTEKADNAAEAAFILGRYQL 108 Query: 124 YPESKNVDYVYYLVGMSYAQMIRD------VPYD-QRATKLMLQYMSRIVERYTNSP 173 Y G++ + + D Q+ T Q+ R +E +S Sbjct: 109 NQGDALSASNYLQQGLALDEQHAGLHNLLAIALDEQQRTAQAKQHFLRAMELEPDSK 165 >gi|86134824|ref|ZP_01053406.1| conserved hypothetical protein [Polaribacter sp. MED152] gi|85821687|gb|EAQ42834.1| conserved hypothetical protein [Polaribacter sp. MED152] Length = 601 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 39/92 (42%), Gaps = 12/92 (13%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 ++ L+ ++ +A + E+ I +S VD +Y+L+ +Y + D Sbjct: 518 QAKLLI-----KEDRFLEAIASLEKIIAADNQSFLVDDIYFLMAETYNYQLND------- 565 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + ++ +I+ + +S Y+ AR R Sbjct: 566 AEKAKEFYQKIIFDHPSSIYLVEARKKFRKLR 597 >gi|325269998|ref|ZP_08136607.1| hypothetical protein HMPREF9141_1817 [Prevotella multiformis DSM 16608] gi|324987721|gb|EGC19695.1| hypothetical protein HMPREF9141_1817 [Prevotella multiformis DSM 16608] Length = 1130 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 20/50 (40%) Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + V +Y D E ++ L Y+ A V+ + +YP+ W Sbjct: 617 LRRVSDDYPDYEQMDDVYYHLYLLYMRKGDQQMADSYVARLSRKYPKSKW 666 >gi|182415050|ref|YP_001820116.1| tetratricopeptide TPR_4 [Opitutus terrae PB90-1] gi|177842264|gb|ACB76516.1| Tetratricopeptide TPR_4 [Opitutus terrae PB90-1] Length = 514 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 43/122 (35%), Gaps = 21/122 (17%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y +AVL L + ++ A + P ++ + L A +Q G+ + A + Sbjct: 36 YYRAVLRLADNDYDAATTLLRETLSRAPDYSP----AYLQLANLQLKTGELEGAERDYQR 91 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-----SPY 174 + P Y +G+ ++R + T + +++ N S Y Sbjct: 92 RLALVPRDP---YA--RLGLVRLALLR------QRTGEARGLLEELLKDAPNFSTAHSLY 140 Query: 175 VK 176 + Sbjct: 141 AE 142 >gi|169826087|ref|YP_001696245.1| hypothetical protein Bsph_0490 [Lysinibacillus sphaericus C3-41] gi|168990575|gb|ACA38115.1| hypothetical protein Bsph_0490 [Lysinibacillus sphaericus C3-41] Length = 343 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 7/77 (9%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + +S + + +++YE+ + E S+A E N+ + + KS Sbjct: 150 DIESDDNPLTTQESKDDRDKQIYEEGLTAYNEGRTSEAVEALNKINGK---SEYYEKSQE 206 Query: 99 MSAF----VQYSAGKYQ 111 M + + KY Sbjct: 207 MLKDIDKKIYWENIKYP 223 >gi|114686933|ref|XP_001137102.1| PREDICTED: tetratricopeptide repeat protein 38 isoform 2 [Pan troglodytes] Length = 469 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 45/150 (30%), Gaps = 29/150 (19%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYE 78 L+G D LD + +++ AV NF KA E Sbjct: 70 IATGLVLIGTGSSVKLDKELDLAVKTMVEISRTQPLTRREQLHVSAVETFANGNFPKACE 129 Query: 79 YFNQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDY 132 + Q +D P M A + G +Q YP + ++ Sbjct: 130 LWEQILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPL 178 Query: 133 VYYLVGMSYAQMIRDVPYDQ--RATKLMLQ 160 Y+ G+ ++ YD+ + K L Sbjct: 179 SSYVKGIYSFGLMETNFYDRAEKLAKEALS 208 >gi|325295621|ref|YP_004282135.1| hypothetical protein Dester_1446 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066069|gb|ADY74076.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 341 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 3/62 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 A+ L N +A F + +PF + A G Y++A E ++ Sbjct: 252 NLAISLLGSGNIDEAILEFQKLKNKYPFLP---EIYYNEAVAYLKKGYYKKAIEDFEIFL 308 Query: 122 TQ 123 Sbjct: 309 EL 310 >gi|313205816|ref|YP_004044993.1| tpr repeat protein [Riemerella anatipestifer DSM 15868] gi|312445132|gb|ADQ81487.1| TPR repeat protein [Riemerella anatipestifer DSM 15868] gi|315022788|gb|EFT35812.1| TPR repeat protein [Riemerella anatipestifer RA-YM] gi|325336744|gb|ADZ13018.1| putative tetratricopeptide TPR_2 repeat protein [Riemerella anatipestifer RA-GD] Length = 461 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 43/116 (37%), Gaps = 14/116 (12%) Query: 57 QREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++E+YE A L + + + A ++ + FP + + S L Y +GK + + Sbjct: 262 EQELYETNAALLIDSEKYDDALVLLDKGIKKFPKSN--KLSEL-QGTAYYKSGKTNEFVN 318 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 ++ + P K +S+ + + D+ R +E + Sbjct: 319 NLKKQLEANPNDK----------VSWYNLGVLLSKDEAKLNEAEGAFKRALEIDPD 364 >gi|311695030|gb|ADP97903.1| tetratricopeptide TPR_2 repeat protein [marine bacterium HP15] Length = 169 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 50/152 (32%), Gaps = 24/152 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + KAV ++E N ++A F Q + D+P +A + + + A S E Sbjct: 22 FAKAVSAMEEGNLAEAKTRFEQLASDYPGKAGPMA-----NLGIIAFQEEDTETAKSWFE 76 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +T PE + +++ +I + Y + N Y A Sbjct: 77 RTLTVNPEH--------VQALNHLGVI---ARNAGEFDEAEGYYRAALSADPN--YAP-A 122 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 + + K E Y + Y +A Sbjct: 123 ILNLAFLLDIYLGKPAEAVDLYER---YQSAA 151 >gi|298241367|ref|ZP_06965174.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM 44963] gi|297554421|gb|EFH88285.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM 44963] Length = 850 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 70/232 (30%), Gaps = 46/232 (19%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF--------PFAGVARKSLLMSAFV 103 + + + + A + ++ F +A E + + + P A F+ Sbjct: 562 EHPQTAKALQQWAFIHIELGKFGEALELYQRVLALYERVVAKDDP--DWAETFD-NLGFL 618 Query: 104 QYSAGKYQQAASLGEEYITQY-----PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 Y G+Y QA + + PE + V + ++Y + R +R Sbjct: 619 YYCQGRYTQAEHYYQRALDLSRQISGPEHPDTANVLNNLALTYIKQERYAEC-ERIYGQA 677 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 L R + + +N + YL++ Y A F VL Sbjct: 678 LAIYHRTL--------GAEHSHTINALQN--------VALVYLRQRRYEEAEEHFLRVLR 721 Query: 219 NYSD--------AEHAEE---AMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + + + A ++ AY ++ +++ + P Sbjct: 722 SLQENDLTNPTISSAAHRNLGSLYLDQRAYQQAEFHL--QQALAIHERNLPS 771 >gi|257464360|ref|ZP_05628737.1| Tetratricopeptide TPR_2 repeat protein [Fusobacterium sp. D12] Length = 185 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 8/76 (10%) Query: 70 EQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 ++++ A +F + + A+V Y KY++A E+ + P S Sbjct: 51 KKDYDMAVYFFEKLMKLDATNGNWPGF----LAYVYYEQEKYKKAIPYFEKSVDLSPNSP 106 Query: 129 NVDYVYYLVGMSYAQM 144 + Y+L+G SY+++ Sbjct: 107 FI---YFLLGNSYSRL 119 >gi|160903365|ref|YP_001568946.1| TPR repeat-containing protein [Petrotoga mobilis SJ95] gi|160361009|gb|ABX32623.1| Tetratricopeptide TPR_2 repeat protein [Petrotoga mobilis SJ95] Length = 1911 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 57/182 (31%), Gaps = 28/182 (15%) Query: 61 YEK-AVLFLKEQNFSKAYEYFNQCSRDF-P--------------FAGVARKSLLMSAFVQ 104 Y + A L + N+ A + + + + + P ++ + L Sbjct: 1716 YSQLAKLQMTSGNWWNAIKAYEEALKVYIPQRDSRDYAMVKKNLGDAYSQLAKLQMT--- 1772 Query: 105 YSAGKYQQAASLGEEYITQY-PESKNVDYVYYLVGMSY-AQMIRDVPYDQRATKLMLQYM 162 +G + A EE + Y P+ + DY + + DV + ++ Sbjct: 1773 --SGNWWNAIKAYEEALKVYIPQRDSRDYAIVQKNLGDAYIKLADVETTSENFENAIKAY 1830 Query: 163 SRIVERYTNSPYVKG---ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 ++ YT Y + + +QLA E + Y A+ F+ Sbjct: 1831 EEALKVYTPQQYQGDYATVKENLGDAYSQLAKLEAASENWKNALKAYKEALKIFKE--EK 1888 Query: 220 YS 221 + Sbjct: 1889 FP 1890 >gi|258572182|ref|XP_002544853.1| serine/threonine-protein phosphatase 5 [Uncinocarpus reesii 1704] gi|237905123|gb|EEP79524.1| serine/threonine-protein phosphatase 5 [Uncinocarpus reesii 1704] Length = 478 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 73/232 (31%), Gaps = 54/232 (23%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSR--DFPFAGVARKSLLMSAFVQYSAG 108 D+ + + + ++ A +++ + P + ++ Sbjct: 4 ADIEAATALKVQGNKAFAKHDWPGALDFYTQAIEKYDQDP-SFWCNRAQ-----ANIKLE 57 Query: 109 KYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y A + + I P Y Y+ ++ ++ + + L+ +V Sbjct: 58 AYGYAIADATKAIELDPS-----YVKAYWRRAIANTAIL--------SYREALRDFKAVV 104 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 ++ N A+ + ++R E+ AI + A Sbjct: 105 KKAPNDR---DAKLKLAECEKL------------VRRIEFEKAIEVAE--------PPSA 141 Query: 227 EEAMAR----LVEAYVALALMDE-AREVVSLIQERYPQGYW--ARYVETLVK 271 E + + E Y +AL DE +E + + ER+ G +Y +VK Sbjct: 142 FEGLDIDAIKVEETYDGVALGDEMTQEFIDDMIERFKNGKKIHKKYAYKIVK 193 >gi|229496266|ref|ZP_04389986.1| putative TPR domain protein [Porphyromonas endodontalis ATCC 35406] gi|229316844|gb|EEN82757.1| putative TPR domain protein [Porphyromonas endodontalis ATCC 35406] Length = 1009 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 72/220 (32%), Gaps = 41/220 (18%) Query: 61 YEKAVLFLKEQNFSKAYEYF---------NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 Y +++A YF + + QY+ Sbjct: 513 YYLGYALFNGGRYAEAKGYFASSVHDSKQGALRQSDAYTR--------LGDCQYATNALD 564 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + E I+ P S++ D + I + ++ + + R++ + + Sbjct: 565 AAFASYERAISLAP-SQSSD------ALLRLAEINGL---RKQYSRQIALLDRLITSFPD 614 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 SP A + GR YL +G AA F + YS +E A+ Sbjct: 615 SPAAAQAS--------------YQKGRAYLLQGNNDAAEKAFVATASQYSQSEEGRLALL 660 Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 +L Y ++++ + + + RYP+ A T +K Sbjct: 661 QLALLYYNTQRVEKSLDTYTQLMHRYPKSAEAATAFTHLK 700 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 1/91 (1%) Query: 45 DVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 D + S D + Y+K +L + N A + F + + + R +LL A + Sbjct: 606 DRLITSFPDSPAAAQASYQKGRAYLLQGNNDAAEKAFVATASQYSQSEEGRLALLQLALL 665 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 Y+ + +++ + + +YP+S + Sbjct: 666 YYNTQRVEKSLDTYTQLMHRYPKSAEAATAF 696 >gi|262193681|ref|YP_003264890.1| FecR protein [Haliangium ochraceum DSM 14365] gi|262077028|gb|ACY12997.1| FecR protein [Haliangium ochraceum DSM 14365] Length = 512 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 36/139 (25%), Gaps = 40/139 (28%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG------- 108 E+Y A + + ++A +P +L+ Y G Sbjct: 353 TAEELYRDAETAMGKGESARARSLLRALLGRYP-----DDALVDV--AHYELGRMAFDAA 405 Query: 109 KYQQAA----SLGEE-----YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y +A ++ E ++ P YL V Sbjct: 406 DYARARRHLGAVVERGRDPVFLE--P-------AAYLR--------CRVELADARASAAR 448 Query: 160 QYMSRIVERYTNSPYVKGA 178 Q + +R+ SP A Sbjct: 449 QCLRGFRDRFPRSPSDAEA 467 >gi|189425029|ref|YP_001952206.1| hypothetical protein Glov_1970 [Geobacter lovleyi SZ] gi|189421288|gb|ACD95686.1| hypothetical protein Glov_1970 [Geobacter lovleyi SZ] Length = 348 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%) Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 A+ + LVL Y + AE A+ + + D+A+ YPQG ET Sbjct: 282 ALAEYLLVLEEYPNLPQAEFALFNAAQTLAEMGFNDQAKLRFEQYLRLYPQGKQRSNAET 341 Query: 269 LV 270 L+ Sbjct: 342 LL 343 >gi|158338601|ref|YP_001519778.1| TPR domain-containing protein [Acaryochloris marina MBIC11017] gi|158308842|gb|ABW30459.1| TPR domain protein [Acaryochloris marina MBIC11017] Length = 287 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 36/237 (15%), Positives = 76/237 (32%), Gaps = 57/237 (24%) Query: 36 VGWERQSSRDVYLDSVTDVRYQRE---VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG- 91 G ++ + + + ++ A+ + NF+KA +Y+ + P Sbjct: 26 GGHPAFAAPEQSTPPAYTAEIETQVENLFNAAMEATNKGNFAKAEQYWTEALDFLPNNPA 85 Query: 92 -VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL------VGMSYAQM 144 + + S GK++ A + + PE + YL G++ Sbjct: 86 IWSNRGNSKI-----SQGKFEAALVDYDRSVELAPEQPDA----YLNRGAVQEGLAN--- 133 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 + + ++++E A Y G N A +G Sbjct: 134 ----------WEAAIADYNKVIELDPK-----EAAAYNNRG-NAKAG-----------QG 166 Query: 205 EYVAAIPRFQLVLANYSDAEHAE--EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 ++ AA+ F+ + A A+A + DEA + + + +YPQ Sbjct: 167 DWNAALTDFETAMELSPQFAFARGNYALAL-----YQVGERDEAIKTMRNLVRKYPQ 218 >gi|56421604|ref|YP_148922.1| hypothetical protein GK3069 [Geobacillus kaustophilus HTA426] gi|56381446|dbj|BAD77354.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 490 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 15/100 (15%) Query: 48 LDSVTDVRYQREVY---EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAF 102 LD + ++ ++A L+E+ F++A E +P ++ A Sbjct: 138 LDGSEWTEEEEQLMVLEDRARRLLEEERFAEAIEALEALVVRYPDVWSAHN-----NLAL 192 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNV-----DYVYYLV 137 + +G +A E + + P + + + YYL Sbjct: 193 AYFYSGDVDKAKQKVREVLKRDPGNLHALCNALVFAYYLR 232 >gi|332018277|gb|EGI58882.1| RNA polymerase II-associated protein 3 [Acromyrmex echinatior] Length = 504 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 34/99 (34%), Gaps = 17/99 (17%) Query: 37 GWERQSSRDVYLDSVTDVRYQREV---YEKAVLFLKEQN-------FSKAYEYFNQCSRD 86 ++ + +S + + E+ Y KA+ + ++ N + KA +++ + Sbjct: 99 ACKKLEDEEQSDESSDEPLSKEELEKNYSKAIEYKQQGNDFVKQKKWDKAIASYSEAIKL 158 Query: 87 FPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 FP+ A ++L A + I Sbjct: 159 FPYDAIFYANRAL-----CYLKQDNLYSAEADCSSAIQL 192 >gi|294678710|ref|YP_003579325.1| hypothetical protein RCAP_rcc03194 [Rhodobacter capsulatus SB 1003] gi|294477530|gb|ADE86918.1| conserved hypothetical protein [Rhodobacter capsulatus SB 1003] Length = 276 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 45/134 (33%), Gaps = 14/134 (10%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA-AS 115 ++ +++A L + +F A + F + +P + + + AG A + Sbjct: 153 EQADFDRAKGVLDQGDFRAAADLFKTFAETYPGGPLTGDAGYLRGEALMKAGDVPGAPRA 212 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + + PE K +G + + R ++ + R+ S Sbjct: 213 WLDGF-SAEPEGKRAADDLLELGKALGTLGRKT--------EACATLTEVPARFPGSE-- 261 Query: 176 KGARFYVTVGRNQL 189 AR V + L Sbjct: 262 --ARGKVAAAQASL 273 >gi|261250852|ref|ZP_05943426.1| TPR domain protein in aerotolerance operon [Vibrio orientalis CIP 102891] gi|260937725|gb|EEX93713.1| TPR domain protein in aerotolerance operon [Vibrio orientalis CIP 102891] Length = 714 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 29/84 (34%), Gaps = 15/84 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVA--------RKSL---LMSAFVQYS 106 ++A + F+ A E F + + +SL A Sbjct: 349 QQAKQLFDQGKFADAAERFTDQQWKGVSQYQNQNYSDAIETLKNEQSLDGRYNLANAYAQ 408 Query: 107 AGKYQQAASLGEEYITQYPESKNV 130 G+ +AA + +E + Q P+ ++ Sbjct: 409 NGQLDKAAEIYQEILKQAPQHQDA 432 >gi|71907572|ref|YP_285159.1| TPR repeat-containing protein [Dechloromonas aromatica RCB] gi|71847193|gb|AAZ46689.1| TPR repeat:Tetratricopeptide TPR_4 [Dechloromonas aromatica RCB] Length = 952 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 36/99 (36%), Gaps = 6/99 (6%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 L R ++ + A+ + KA EY + P + + K LL S + A Sbjct: 317 LPPAWLARREQLLMAAALAHYGLGSHEKAREYLDALIARSP-SNLGAKKLLASIYA--DA 373 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 Y +A +L E P+ V YL+G R Sbjct: 374 KDYGRAQTLLESLQRATPDDPQ---VMYLLGTVNLAQRR 409 >gi|114320406|ref|YP_742089.1| type IV pilus biogenesis/stability protein PilW [Alkalilimnicola ehrlichii MLHE-1] gi|114226800|gb|ABI56599.1| type IV pilus biogenesis/stability protein PilW [Alkalilimnicola ehrlichii MLHE-1] Length = 252 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 39/277 (14%), Positives = 77/277 (27%), Gaps = 75/277 (27%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 L + + C +G RD ++ T + + +L+E + +A Sbjct: 11 LILFLAVGVVGCGTMGQSGSGDRDRAVEVNTQL---------GLGYLQEGEYEEANRRLE 61 Query: 82 Q---CSRDFPFAGVARKSLL-------MSAFVQYS-----AGKYQQAASLGEEYI----- 121 + R + A +LL A Y G+ + ++ Sbjct: 62 RALDIDRRYA-PAHAAMALLQEQLGQPEEAGRHYRRAVRLDGENASTRNNYGRFLCEQGD 120 Query: 122 --------------TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 Y + ++ G+ + + + Y R + Sbjct: 121 LDRALDQFEAALDNPLY-RNPHIPLAN--AGVCLMR--------EGQHERAEDYFLRSLR 169 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 N+ + A + R Q E YL R Y A +A+H Sbjct: 170 E--NARFAP-ALLRMAQLRFQAGDHE--GAEEYLNR--YRA-------------EAQHTP 209 Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 ++ V+ A+ D ++ R+P AR Sbjct: 210 ASLWLGVQLARAVGDADAEASYGLSLRNRFPDSREAR 246 >gi|325119752|emb|CBZ55305.1| Peptidylprolyl isomerase D (Cyclophilin D),related [Neospora caninum Liverpool] Length = 578 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 19/153 (12%), Positives = 44/153 (28%), Gaps = 29/153 (18%) Query: 42 SSRDVYLD--SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 S +D D D+ + Y + + LK+ +F A + Sbjct: 69 SCKDAGNDVFKSGDIAAAKAKYTEGLKQLKDLDFGDAKRLRVALNS-------------N 115 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 A A + +A + + + PE+ Y G++ + Sbjct: 116 VAMCCIKAEDWSEAIAAANAVLEEEPENVK---ALYRRGVARSAF--------GFYGEAK 164 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 + ++ + AR + + ++A Sbjct: 165 ADLLQVARLDPKN---ADARKELEKVKERIAKH 194 >gi|315636306|ref|ZP_07891556.1| TPR repeat-containing protein [Arcobacter butzleri JV22] gi|315479395|gb|EFU70078.1| TPR repeat-containing protein [Arcobacter butzleri JV22] Length = 688 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 48/121 (39%), Gaps = 13/121 (10%) Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV--- 60 +L + IF+ Y++ F + IF SI E Q + + D + E+ Sbjct: 1 MLLFRMEIFKKLVYKIL-FGIFIFNSILYANNDLLESQPEIIFETERLLDSQENLEIQVD 59 Query: 61 YEKAVLFLKEQNFSKAYEYFNQ--CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + KAVL LK+ + +A + F + + P SLL Y G + A S Sbjct: 60 FNKAVLHLKKGEYEEAIKIFEKTALVIEVP-------SLLNMGIAYYKLGDTETAKSYLN 112 Query: 119 E 119 + Sbjct: 113 K 113 >gi|303240302|ref|ZP_07326821.1| TPR repeat-containing protein [Acetivibrio cellulolyticus CD2] gi|302592212|gb|EFL61941.1| TPR repeat-containing protein [Acetivibrio cellulolyticus CD2] Length = 581 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 20/117 (17%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 R+ +++ L + +A + ++ + D P A + GKY + Sbjct: 29 SSRDYFQEGNFLLNSGKYDEAIKNYDRAIKIDDDVPEFYY------NKAVCLSNLGKYNE 82 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 A L + I + Y+ G + + L +S+ +ERY Sbjct: 83 AIELYDRVIDL---DSDFKEAYFNKGACLVEAHKLAD--------ALDTVSKYIERY 128 >gi|253571826|ref|ZP_04849231.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251838423|gb|EES66509.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 734 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 39/107 (36%), Gaps = 17/107 (15%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSR----DFPFAGVARKSLLMSAFVQYSAGKYQ 111 + ++ A +LK++ +++A E + + A +K + KY Sbjct: 497 SEDILFPIADFYLKKERWNEAIEVYEEMETIGALQGRGAEYYQK----LGYALQKNKKYA 552 Query: 112 QAASLGEEYITQYP----ESKNVDYVY-----YLVGMSYAQMIRDVP 149 +A + T P ++++ Y Y +SY + + + Sbjct: 553 EAIDAYLKADTLKPDNIWNNRHLAICYRLNRNYQAALSYYKKVEEAT 599 >gi|239946448|ref|ZP_04698204.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes scapularis] gi|239920724|gb|EER20751.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes scapularis] Length = 375 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 41/112 (36%), Gaps = 14/112 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y K F K + +A + +N+ + P S Y+ G+Y+++ E+ Sbjct: 254 YYNKGNSFYKLGKYEEAIKEYNKAIKLKP--DYVE-SYYNKGISLYNIGEYEESIIAYEK 310 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 I P+ ++ Y G S + + ++ ++ +E + Sbjct: 311 AIELKPDDADI---YNNKGTSLFNL--------GEYEEAIKAYNKSIELKPD 351 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 40/132 (30%), Gaps = 28/132 (21%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 + + ++ Y+ + +A + +N+ + P + Y Sbjct: 3 EKNEFEKHQAAKKYYDAGQALALRGRYEEAIKEYNKAIKLKP----------DEDVLYYK 52 Query: 107 AGK-------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 G Y++A ++ I+ P + D Y G S+ D + L Sbjct: 53 KGNSLAFLGRYEEAIECYDKSISLNP--EYAD-AYNNKGNSFF--------DLEKYEEAL 101 Query: 160 QYMSRIVERYTN 171 + +E N Sbjct: 102 VEYDKAIELKPN 113 >gi|218245456|ref|YP_002370827.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801] gi|218165934|gb|ACK64671.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801] Length = 263 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 63/204 (30%), Gaps = 40/204 (19%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSA 107 D + + + + + +++N+ KA E + L++ + + A Sbjct: 58 AEDRKNAANLRQLGLQYRQQENYPKAIESLEKSVSLDSKNLSG------LVLLGWTLHLA 111 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 GK A E +T + +G+ Y Q + + S+ V Sbjct: 112 GKSPSAQQTLEHALTINSQHIET---LNALGIVY--------LVQGNLEQAIATHSKAVI 160 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 N N++A + + Y + +Y AI Q + H Sbjct: 161 INPN---------------NEIAHYNLNLA--YQRLQQYTKAIKHGQQAIKLEPHNPHPW 203 Query: 228 EAMARLVEAYVALALMDEAREVVS 251 A+A Y + +++E Sbjct: 204 VALAI---TYWEMGDSKKSQETYR 224 >gi|154340822|ref|XP_001566364.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 692 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++++ + +A E +FP + A LM A+ Y G Y +AASL E+ Sbjct: 60 YIRDHQYEEAVELLATQLEEFPRSRAA--VSLM-AYCYYMMGDYGEAASLYEQ 109 >gi|84687703|ref|ZP_01015576.1| hypothetical protein 1099457000251_RB2654_05632 [Maritimibacter alkaliphilus HTCC2654] gi|84664286|gb|EAQ10777.1| hypothetical protein RB2654_05632 [Rhodobacterales bacterium HTCC2654] Length = 275 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%) Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 G++ A FQ + NY +A+ EA A ++ +A Sbjct: 166 GDFAGAASMFQTFVDNYPGTPMTGQALFLKGEALNAQNMVADAARA 211 Score = 35.1 bits (80), Expect = 9.5, Method: Composition-based stats. Identities = 12/105 (11%), Positives = 31/105 (29%), Gaps = 10/105 (9%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV-QYSAGKYQQAASLGEEYITQYPES 127 + +F+ A F ++P + ++L + A + + P Sbjct: 164 EAGDFAGAASMFQTFVDNYPGTPMTGQALFLKGEALNAQNMVADAARAYLASFSAD-PTG 222 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 ++ +G + Q+ T + + R+ S Sbjct: 223 QSAPNALVQLGTALGQL--------GQTNEACATLGEVPNRFPGS 259 >gi|254774296|ref|ZP_05215812.1| putative transcriptional regulator [Mycobacterium avium subsp. avium ATCC 25291] Length = 381 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 8/60 (13%), Positives = 18/60 (30%), Gaps = 7/60 (11%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGEE 119 +A + +R+ P + + LM+A+ Y + A + Sbjct: 171 AQAEAEIACGRAFSVITELESLTREHP---YREQLWAQLMTAY--YLTDRQSDALAAYRR 225 >gi|221103525|ref|XP_002164032.1| PREDICTED: similar to nephrocystin 3, partial [Hydra magnipapillata] Length = 1469 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 50/137 (36%), Gaps = 19/137 (13%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQ-------CSRDFPFAGVAR-KSLLMSAFVQ---Y 105 +Y + + ++N+ +A YF Q ++ P A L +V Y Sbjct: 1297 AHSLYNLGIAYFSKENYDQAIHYFEQSLQMEKLIYKNQPNPRTAEILHNLGLIYVNKKQY 1356 Query: 106 SA--GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y+Q+ ++ I Q+ ++ + +G+ YA I + + LQ Sbjct: 1357 KDAINFYEQSLD-IKKLILQHQPHPSIAILLNNLGLVYAD-IEQYDQAIKYHQQALQ--- 1411 Query: 164 RIVERYTNSPYVKGARF 180 +++ + N PY Sbjct: 1412 -VIQVFENHPYTANIEK 1427 Score = 36.6 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 77/234 (32%), Gaps = 46/234 (19%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFN------QC---SRDFPFAGVARKSLLMSAF 102 + +++ + + +A + + + P + SL + Sbjct: 1206 PHPDVADSLNNLGLIYYDKGQYDQAINCYEQSLAMNKLIYQDKPHPSVAYSFNSLGLL-- 1263 Query: 103 VQYSAGKYQQAASLGEEYITQYP------ESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 S GKY QA + EE + Y + +V + Y +G++Y YDQ Sbjct: 1264 -YISIGKYDQAVNYCEESLKIYKLVYQNEQHPDVAHSLYNLGIAYFSKEN---YDQ---- 1315 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL- 215 + Y + ++ Y + L G Y+ + +Y AI ++ Sbjct: 1316 -AIHYFEQSLQM-EKLIYKNQPNPRTAEILHNL-------GLIYVNKKQYKDAINFYEQS 1366 Query: 216 -----VLANYSDAEHAEEAMARLVEAYVALALMDEA----REVVSLIQ--ERYP 258 ++ + + L Y + D+A ++ + +IQ E +P Sbjct: 1367 LDIKKLILQHQPHPSIAILLNNLGLVYADIEQYDQAIKYHQQALQVIQVFENHP 1420 >gi|220702197|pdb|2KC7|A Chain A, Solution Nmr Structure Of Bacteroides Fragilis Protein Bf1650. Northeast Structural Genomics Consortium Target Bfr218 Length = 99 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 33/92 (35%), Gaps = 11/92 (11%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L + + G + A EE++ P K D YYL+G +Y ++ + Sbjct: 3 QLKTIKELINQGDIENALQALEEFLQTEPVGK--DEAYYLMGNAYRKL--------GDWQ 52 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 L +E +SP AR V N Sbjct: 53 KALNNYQSAIELNPDSP-ALQARKMVMDILNF 83 >gi|254473178|ref|ZP_05086576.1| tetratricopeptide TPR_2 [Pseudovibrio sp. JE062] gi|211957899|gb|EEA93101.1| tetratricopeptide TPR_2 [Pseudovibrio sp. JE062] Length = 236 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 14/121 (11%), Positives = 36/121 (29%), Gaps = 18/121 (14%) Query: 66 LFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ + + A + + R P G R++ + + ++ + E+ + Sbjct: 125 RAIEGKEYGLALDLLDAVVRLDPGYVEGWNRRATV-----HFLKEDLGRSLADIEQVLRI 179 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 P Y +S MI + L+ ++ Y + A + Sbjct: 180 EPRH----YP----ALSGFAMIL---RKTGENEKALEVFQHVLSIYPLLENAQDAVKSLR 228 Query: 184 V 184 Sbjct: 229 E 229 >gi|194373965|dbj|BAG62295.1| unnamed protein product [Homo sapiens] Length = 604 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 11/81 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQ 111 ++ + ++ A + + F + +L AF + AG Sbjct: 185 FQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFRAGNVS 244 Query: 112 QAASLGEEYITQY-PESKNVD 131 A SL E++ Y P++K + Sbjct: 245 CALSLSREFL-LYSPDNKRMA 264 >gi|118465098|ref|YP_880660.1| transcriptional regulator [Mycobacterium avium 104] gi|118166385|gb|ABK67282.1| putative transcriptional regulator [Mycobacterium avium 104] Length = 381 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 8/60 (13%), Positives = 18/60 (30%), Gaps = 7/60 (11%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGEE 119 +A + +R+ P + + LM+A+ Y + A + Sbjct: 171 AQAEAEIACGRAFSVITELESLTREHP---YREQLWAQLMTAY--YLTDRQSDALAAYRR 225 >gi|91201894|emb|CAJ74954.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 505 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 29/77 (37%), Gaps = 8/77 (10%) Query: 46 VYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAF 102 Y D++ + ++++ A+ + N+ +A + ++L Sbjct: 377 TYRDAMNEYPSNKQIHTALALAYKNNGNYKEAINEYKALIA-----EDLENAVLRNNIGT 431 Query: 103 VQYSAGKYQQAASLGEE 119 V Y G+Y +A ++ Sbjct: 432 VYYRKGEYDEAIKEYKK 448 >gi|75909506|ref|YP_323802.1| hypothetical protein Ava_3299 [Anabaena variabilis ATCC 29413] gi|75703231|gb|ABA22907.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413] Length = 724 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 8/57 (14%), Positives = 22/57 (38%), Gaps = 1/57 (1%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E + LK+ N+ A + + ++ + +G+ ++A +L + Sbjct: 10 EAGLAALKQGNYQTAIAQLEPIATQGNGTA-SLQARVGLVMAYARSGELKKAIALCQ 65 >gi|17231870|ref|NP_488418.1| hypothetical protein all4378 [Nostoc sp. PCC 7120] gi|17133514|dbj|BAB76077.1| all4378 [Nostoc sp. PCC 7120] Length = 727 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 8/57 (14%), Positives = 22/57 (38%), Gaps = 1/57 (1%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E + LK+ N+ A + + ++ + +G+ ++A +L + Sbjct: 10 EAGLAALKQGNYQTAIAQLEPIATQGNGTA-SLQARVGLVMAYARSGELKKAIALCQ 65 >gi|302818335|ref|XP_002990841.1| hypothetical protein SELMODRAFT_161156 [Selaginella moellendorffii] gi|300141402|gb|EFJ08114.1| hypothetical protein SELMODRAFT_161156 [Selaginella moellendorffii] Length = 973 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 67/195 (34%), Gaps = 32/195 (16%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 K L L + ++ + ++ F P +LL A Q++ G++Q++ L + + Sbjct: 132 KGQLLLAKGDYEQMFDVFKIVLDVRPDN---LLALLGQACAQFNRGRFQESLGLYKRVLQ 188 Query: 123 QYPESK------NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 +P N+D +G+ D Q TK ML+ E Y Y Sbjct: 189 MHPGCPASLDPENLD-ALVALGIMDINA-NDAESVQEGTKKMLEAF----EIYP---YCA 239 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 A N LA Y ++ + LA+ +A ++ L + Sbjct: 240 TAL-------NHLANH-------YFYTEQHGVVEQLMETALASTDNALIKSQSYFNLARS 285 Query: 237 YVALALMDEAREVVS 251 Y + D+A Sbjct: 286 YHSKGDYDKAAAYYR 300 >gi|225551900|ref|ZP_03772840.1| FF domain protein [Borrelia sp. SV1] gi|225370898|gb|EEH00328.1| FF domain protein [Borrelia sp. SV1] Length = 903 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK++N+ A ++ + P + + A +G QA S E+ Sbjct: 732 LYLKASINLKKENYQNAIPLYSLVIKKNPEN---TSAYINLAKAYEKSGNKSQAISTLEK 788 Query: 120 YI 121 I Sbjct: 789 II 790 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 79/279 (28%), Gaps = 74/279 (26%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSR 85 ++A + + + +VY Q + Y+ ++ K + + + E F+ + Sbjct: 531 TLAQAYENNGDLLKAENVYEKITKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDP 590 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 +K+L K ++A E+ I KN YY G++ + Sbjct: 591 KH------KKALHNKGIALMMLNKNKKAIESFEKAIQI---DKNYGTAYYQKGIAEEKN- 640 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------------RFYVTVGR------ 186 + Y N Y A Y+ Sbjct: 641 -------GDMQQAFASFKNAYNLYKNPNYALKAGIVSNNLGNFKQSEEYLNFFNANAKKP 693 Query: 187 NQLAAKEVEIGRY------------------------Y--------LKRGEYVAAIPRFQ 214 N++A + I ++ Y LK+ Y AIP + Sbjct: 694 NEIAIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNAIPLYS 753 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 LV+ + A L +AY +A + I Sbjct: 754 LVIKKNPENTSAY---INLAKAYEKSGNKSQAISTLEKI 789 Score = 35.9 bits (82), Expect = 6.3, Method: Composition-based stats. Identities = 37/256 (14%), Positives = 78/256 (30%), Gaps = 65/256 (25%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS------------ 100 D Y Y+K + K + +A+ F + A K+ ++S Sbjct: 623 DKNYGTAYYQKGIAEEKNGDMQQAFASFKNAYNLYKNPNYALKAGIVSNNLGNFKQSEEY 682 Query: 101 ---------------AF----VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + ++ K +++ + I P + +Y YL Sbjct: 683 LNFFNANAKKPNEIAIYNLSIAKFENNKLEESLETINKAIDLNP--EKSEY-LYLKASIN 739 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTN--SPYVKGARFYVTVGRNQLAAKEVE---- 195 + + + S ++++ S Y+ A+ Y G A +E Sbjct: 740 LKK--------ENYQNAIPLYSLVIKKNPENTSAYINLAKAYEKSGNKSQAISTLEKIIN 791 Query: 196 ---------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +G Y K Y AI F+ + N EA L + + A Sbjct: 792 KNNKLALNNLGILYKKEKNYQKAIEIFEKAIIN-----SDIEAKYNLATTLIEINDNTRA 846 Query: 247 REVV---SLIQERYPQ 259 ++++ + ++ P+ Sbjct: 847 KDLLIEYTKLKPNNPE 862 Score = 35.1 bits (80), Expect = 9.9, Method: Composition-based stats. Identities = 11/124 (8%), Positives = 44/124 (35%), Gaps = 18/124 (14%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + ++ D + + + A + + KA + + ++ ++ + Sbjct: 516 NEFLKNNPNDAQASKTL---AQAYENNGDLLKAENVYEKITKL----TNTQEDHYKLGII 568 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 ++ KY+ + ++ I P+ K + G++ + ++ K ++ Sbjct: 569 RFKLKKYEHSIESFDQTIKLDPKHKK---ALHNKGIALMMLNKN--------KKAIESFE 617 Query: 164 RIVE 167 + ++ Sbjct: 618 KAIQ 621 >gi|149411439|ref|XP_001512529.1| PREDICTED: similar to leprecan-like 1 protein [Ornithorhynchus anatinus] Length = 532 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 25/72 (34%), Gaps = 5/72 (6%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y +Y +A + Y+ +P+ ++V +SY + + + D + Sbjct: 138 FAYYQVDEYVKALECAKSYLLFHPDDEDV-----QDNVSYYESLLEEGLDPETIEPREDA 192 Query: 162 MSRIVERYTNSP 173 + S Sbjct: 193 AKFLKRHKLESE 204 >gi|54874|emb|CAA34914.1| unknown protein [Mus musculus] Length = 519 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 18/146 (12%), Positives = 43/146 (29%), Gaps = 30/146 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARK-------SLLMSAFVQYSAGK 109 E+ + KE + +A + + + +K S L A Sbjct: 228 ERGTAYFKEGKYKQALLQYKKIVSWLEYESSFSGEEMQKVHALRLASHLNLAMCHLKLQA 287 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + D ++++ Y Sbjct: 288 FSAAIESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 336 Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191 ++ A+ + V R QLA Sbjct: 337 PSNK---AAKTQLAVCQQRTRRQLAR 359 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 35/84 (41%), Gaps = 2/84 (2%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFS 74 +++ L ++A+C L ++ + ++ D ++ ++ + L +F Sbjct: 264 MQKVHALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFD 323 Query: 75 KAYEYFNQCSRDFPFAGVARKSLL 98 A F + + +P + A K+ L Sbjct: 324 LARADFQKVLQLYP-SNKAAKTQL 346 >gi|62655561|ref|XP_576630.1| PREDICTED: peptidylprolyl isomerase D [Rattus norvegicus] gi|109487667|ref|XP_001057061.1| PREDICTED: similar to peptidylprolyl isomerase D [Rattus norvegicus] gi|149036303|gb|EDL90962.1| rCG63199 [Rattus norvegicus] Length = 370 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 2/89 (2%) Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLK 69 I +A +L AL+ +I C L Q + D L+++ D + +Y KA + Sbjct: 260 IEKADVSRLQPIALSCVLNIGACKLKMSNWQGAIDSCLEALEMDPSNTKALYRKAQGWQG 319 Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + + +A + P A ++ L Sbjct: 320 LKEYDQALADLKKAQEIAP-GDKAIQAEL 347 >gi|67459383|ref|YP_247007.1| hypothetical protein RF_0991 [Rickettsia felis URRWXCal2] gi|67004916|gb|AAY61842.1| unknown [Rickettsia felis URRWXCal2] Length = 245 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 18/46 (39%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A Y K +A + +I +YP S + Y+ G + + Sbjct: 122 DLALAAYKDNKLTEAKDKFKNFIQKYPNSSLISNAYFWYGECFFKQ 167 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 37/108 (34%), Gaps = 20/108 (18%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 +++Y NS + A F+ + K+ +Y A + Sbjct: 135 EAKDKFKNFIQKYPNSSLISNAYFWYGEC--------------FFKQKDYNGAAVNY--- 177 Query: 217 LANYSDAE---HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 L Y ++ + + + +L + L EA +++ + + +P Sbjct: 178 LKGYKESPKGAKSSDGLLKLALSLGELKKTTEACNMLAKLDKEFPTNR 225 Score = 35.9 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 25/65 (38%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D+ ++ Y+ A+ K+ ++A + F + +P + + + + Y Sbjct: 113 DIAPDKQAYDLALAAYKDNKLTEAKDKFKNFIQKYPNSSLISNAYFWYGECFFKQKDYNG 172 Query: 113 AASLG 117 AA Sbjct: 173 AAVNY 177 >gi|51948528|ref|NP_001004279.1| peptidyl-prolyl cis-trans isomerase D [Rattus norvegicus] gi|66773787|sp|Q6DGG0|PPID_RAT RecName: Full=Peptidyl-prolyl cis-trans isomerase D; Short=PPIase D; AltName: Full=40 kDa peptidyl-prolyl cis-trans isomerase; AltName: Full=Cyclophilin-40; Short=CYP-40; AltName: Full=Rotamase D gi|49900877|gb|AAH76386.1| Peptidylprolyl isomerase D (cyclophilin D) [Rattus norvegicus] Length = 370 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 2/89 (2%) Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLK 69 I +A +L AL+ +I C L Q + D L+++ D + +Y KA + Sbjct: 260 IEKADVSRLQPIALSCVLNIGACKLKMSNWQGAIDSCLEALEMDPSNTKALYRKAQGWQG 319 Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + + +A + P A ++ L Sbjct: 320 LKEYDQALADLKKAQEIAP-GDKAIQAEL 347 >gi|261328922|emb|CBH11900.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 416 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 45/146 (30%), Gaps = 23/146 (15%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARK 95 + + ++ + E+ K + N+ +A Y+ + F A + Sbjct: 121 KAREKFEKRNNPYEGMTAEEIKNKGNELMGLANYKQAVAYYTKAIEMEPENHVF--FANR 178 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + Y+ A E I+ P Y +Y+++ + Y Q Sbjct: 179 AA-----AHTHLKDYRSAIIDCERSISICPT-----YA-----KAYSRLGTTLFY-QENY 222 Query: 156 KLMLQYMSRIVERYTNSP-YVKGARF 180 + + S+ E + Y + + Sbjct: 223 QRAVDAFSKACELDPTNERYREDLKQ 248 >gi|262193399|ref|YP_003264608.1| serine/threonine protein kinase with TPR repeats [Haliangium ochraceum DSM 14365] gi|262076746|gb|ACY12715.1| serine/threonine protein kinase with TPR repeats [Haliangium ochraceum DSM 14365] Length = 967 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 3/68 (4%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A + + + KA F + +R P + + ++ +AG +AAS + Sbjct: 891 QAQIAYNQGLYGKAIPLFEKAARMRPRSA---EVQILLGQAYLAAGNKSKAASSFRRALQ 947 Query: 123 QYPESKNV 130 P Sbjct: 948 LRPGDARA 955 >gi|222099498|ref|YP_002534066.1| hypothetical protein CTN_0524 [Thermotoga neapolitana DSM 4359] gi|221571888|gb|ACM22700.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359] Length = 274 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 23/70 (32%), Gaps = 13/70 (18%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQ-------CSRDFPFAGVARKSLLMSAFVQYSAGKY 110 ++Y A+ E ++ +A F + P L Y+ G Y Sbjct: 21 NDLYTNALNAYLEGDYRRALRLFEESLQKDPTIEERDP------LVKLKMGICAYAIGDY 74 Query: 111 QQAASLGEEY 120 ++A + + Sbjct: 75 EKARAYLSNF 84 >gi|213402715|ref|XP_002172130.1| TPR repeat-containing protein [Schizosaccharomyces japonicus yFS275] gi|212000177|gb|EEB05837.1| TPR repeat-containing protein [Schizosaccharomyces japonicus yFS275] Length = 1103 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 46/149 (30%), Gaps = 22/149 (14%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108 D + Y F+ +Q ++KAYE + Q P + Y Sbjct: 567 ADSNDAQSWYLIGRCFVAQQKYNKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 620 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +YQ A I P + V+Y +G Y + L R E Sbjct: 621 QYQDALDAYSRAIRLNP---YISEVWYDLGTLYESCHNQIG-------DALDAYQRAAEL 670 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 +P++ + + + + ++ + Sbjct: 671 DPGNPHI---KARLQYLQGAQSEQQRAVA 696 >gi|157126387|ref|XP_001654613.1| fk506-binding protein [Aedes aegypti] gi|108873299|gb|EAT37524.1| fk506-binding protein [Aedes aegypti] Length = 450 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 6/91 (6%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 L ++ + A+C+ + ++D +++ D + + +Y + L +F KA E FN Sbjct: 293 LAVYLNKALCYQKLNDHDEAKDACNEALNIDKKSVKALYRRGQSRLSLGDFEKALEDFNA 352 Query: 83 CSRDFPFAGVARKSLLMSA-FVQYSAGKYQQ 112 P K+ L A + Y + Sbjct: 353 VREIEPEN----KAALNQATICKQKIKDYNE 379 >gi|78189658|ref|YP_379996.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3] gi|78171857|gb|ABB28953.1| TPR repeat [Chlorobium chlorochromatii CaD3] Length = 226 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 46/133 (34%), Gaps = 7/133 (5%) Query: 12 FEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71 ++ K AL + A + + + + + +E Sbjct: 31 KHQALRRIKKGALLLCIFAATTLTACSNNELEKLQQEAWKNPNDAALTL-QLGYKYAQEG 89 Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 + +A E F + P A ++L +A + +Y QA S ++++ + P Sbjct: 90 RYMEANESFQKVLALDPKRDEALQALGATA---FRQKQYSQAISYFQQHLERAPADSAR- 145 Query: 132 YVYYLVGMSYAQM 144 Y +G +Y Q+ Sbjct: 146 --LYNLGNAYMQL 156 >gi|50513270|pdb|1P5Q|A Chain A, Crystal Structure Of Fkbp52 C-Terminal Domain gi|50513271|pdb|1P5Q|B Chain B, Crystal Structure Of Fkbp52 C-Terminal Domain gi|50513272|pdb|1P5Q|C Chain C, Crystal Structure Of Fkbp52 C-Terminal Domain Length = 336 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 45/146 (30%), Gaps = 30/146 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109 E+ ++ KE + +A + + + A+K+ L A Sbjct: 152 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQA 211 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ G+S D +L ++++ Y Sbjct: 212 FSAAIESCNKALELDSNNE--------KGLSRRGEAHLAVND---FELARADFQKVLQLY 260 Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191 N+ A+ + V R QLA Sbjct: 261 PNNK---AAKTQLAVCQQRIRRQLAR 283 >gi|193061654|ref|ZP_03042751.1| cellulose synthase operon protein C [Escherichia coli E22] gi|194428684|ref|ZP_03061221.1| cellulose synthase operon protein C [Escherichia coli B171] gi|218556081|ref|YP_002388994.1| cellulose synthase subunit BcsC [Escherichia coli IAI1] gi|300907574|ref|ZP_07125210.1| tetratricopeptide repeat protein [Escherichia coli MS 84-1] gi|301306689|ref|ZP_07212746.1| tetratricopeptide repeat protein [Escherichia coli MS 124-1] gi|192932444|gb|EDV85041.1| cellulose synthase operon protein C [Escherichia coli E22] gi|194413267|gb|EDX29552.1| cellulose synthase operon protein C [Escherichia coli B171] gi|218362849|emb|CAR00479.1| cellulose synthase subunit [Escherichia coli IAI1] gi|300400691|gb|EFJ84229.1| tetratricopeptide repeat protein [Escherichia coli MS 84-1] gi|300838082|gb|EFK65842.1| tetratricopeptide repeat protein [Escherichia coli MS 124-1] gi|315254055|gb|EFU34023.1| tetratricopeptide repeat protein [Escherichia coli MS 85-1] gi|320198343|gb|EFW72946.1| Cellulose synthase operon protein C [Escherichia coli EC4100B] gi|323160574|gb|EFZ46515.1| cellulose synthase operon protein C [Escherichia coli E128010] Length = 1157 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + +V R S V + G+ A ++ + Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 6.3, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|330447846|ref|ZP_08311494.1| tetratricopeptide repeat family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492037|dbj|GAA05991.1| tetratricopeptide repeat family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 699 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 44/128 (34%), Gaps = 33/128 (25%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A ++ F +A + F + + +Y A Y QA + + Sbjct: 345 QQAYQSYQDGKFKQAAQDFE-----------SPQWK---GIAEYKAKNYTQAINTLK--- 387 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P S Y +G +YAQ K ++ ++++ N P A+ Sbjct: 388 ---PLSD--PMSRYNLGNAYAQS--------GQLKQAVETYEKLLKTDPNYP---DAQKN 431 Query: 182 VTVGRNQL 189 + + + L Sbjct: 432 LDIVKKAL 439 >gi|315123119|ref|YP_004065125.1| putative lytic cell-wall binding lipoprotein [Pseudoalteromonas sp. SM9913] gi|315016879|gb|ADT70216.1| putative lytic cell-wall binding lipoprotein [Pseudoalteromonas sp. SM9913] Length = 294 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 33/241 (13%), Positives = 70/241 (29%), Gaps = 40/241 (16%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR---KSL 97 S + V + + + R A+ +L N S+A + + A + Sbjct: 8 GSDKPVVENKINNAGAARTRIALALQYLNTGNNSQAKYNLERA------SEYAPNLPEVH 61 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----QMIRDVPYDQR 153 A+ G+ A ++ + P+ N ++ I + Sbjct: 62 YSLAYYYQQVGENALADKAYQKALAIKPDDPNT--------LNNYGTFLCSIDEYDRATD 113 Query: 154 ATKLMLQ--YMSRIVERYTN-------SPYVKGARFYVTVGRNQLAAKEVE----IGRYY 200 ++ R+ + Y N A Y N + + YY Sbjct: 114 QFLKAIEIPSYIRVAQSYENLALCAIEFNDFTNAESYFQQALNHSSQRASTLISLAALYY 173 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHA-EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 K Y A+ ++ Y D A+ + +++A ++ + I + YP Sbjct: 174 AKSDLYKAS-----TLIKRYDDTAQVSSRALLLSYLVKQRMGRIEDAEKIAATILQTYPN 228 Query: 260 G 260 Sbjct: 229 S 229 >gi|302343448|ref|YP_003807977.1| response regulator receiver protein [Desulfarculus baarsii DSM 2075] gi|301640061|gb|ADK85383.1| response regulator receiver protein [Desulfarculus baarsii DSM 2075] Length = 385 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 32/84 (38%), Gaps = 4/84 (4%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 D L+ + +E+ L +A E F++ + P + ++ + Sbjct: 124 DSILEKRRNPDPVDVAFERGKALLAAGKPDQALESFDEALKLSPKSPRTLLAIGEALEAL 183 Query: 105 YSAGK----YQQAASLGEEYITQY 124 + Y++AA+L E ++ + Sbjct: 184 QKDEEALSRYKEAANLAERFVKAH 207 >gi|296391031|ref|ZP_06880506.1| hypothetical protein PaerPAb_22884 [Pseudomonas aeruginosa PAb1] gi|313106851|ref|ZP_07793060.1| hypothetical protein PA39016_000780018 [Pseudomonas aeruginosa 39016] gi|310879562|gb|EFQ38156.1| hypothetical protein PA39016_000780018 [Pseudomonas aeruginosa 39016] Length = 268 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 4/55 (7%) Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 Y +G+ Y DQR Y R+V + + + A+ + R + Sbjct: 94 LYQIGLIYMSRYN----DQRDDAKATDYFQRVVREFPGTHAAEHAQARLLAMRQR 144 >gi|170018241|ref|YP_001723195.1| cellulose synthase subunit BcsC [Escherichia coli ATCC 8739] gi|169753169|gb|ACA75868.1| cellulose synthase operon C domain protein [Escherichia coli ATCC 8739] gi|323939490|gb|EGB35699.1| cellulose synthase operon protein C [Escherichia coli E482] Length = 1157 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + +V R S V + G+ A ++ + Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREP---ANADAILGLTEVDIAAGDKAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 6.3, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|91202283|emb|CAJ75343.1| hypothetical protein kuste4581 [Candidatus Kuenenia stuttgartiensis] Length = 476 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 9/99 (9%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAG 91 L+ ER S+R D ++ + Y++ +++ A + + + + P Sbjct: 106 LIPIERLSARKDPADLERNMSLAAKYYQEGNTHCDNESYDLALKSYLKAEEVYPDLPGLH 165 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 ++ G A ++YI P+SK++ Sbjct: 166 Y------NMGWLYSKLGDVDSAVDHLQKYIILAPDSKDI 198 >gi|72390447|ref|XP_845518.1| hypothetical protein [Trypanosoma brucei TREU927] gi|62360339|gb|AAX80755.1| hypothetical protein, conserved [Trypanosoma brucei] gi|70802053|gb|AAZ11959.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 416 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 45/146 (30%), Gaps = 23/146 (15%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARK 95 + + ++ + E+ K + N+ +A Y+ + F A + Sbjct: 121 KAREKFEKRNNPYEGMTAEEIKNKGNELMGLANYKQAVAYYTKAIEMEPENHVF--FANR 178 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + Y+ A E I+ P Y +Y+++ + Y Q Sbjct: 179 AA-----AHTHLKDYRSAIIDCERSISICPT-----YA-----KAYSRLGTTLFY-QENY 222 Query: 156 KLMLQYMSRIVERYTNSP-YVKGARF 180 + + S+ E + Y + + Sbjct: 223 QRAVDAFSKACELDPTNERYREDLKQ 248 >gi|15599523|ref|NP_253017.1| hypothetical protein PA4327 [Pseudomonas aeruginosa PAO1] gi|218893417|ref|YP_002442286.1| hypothetical protein PLES_47051 [Pseudomonas aeruginosa LESB58] gi|254239007|ref|ZP_04932330.1| hypothetical protein PACG_05180 [Pseudomonas aeruginosa C3719] gi|254244863|ref|ZP_04938185.1| hypothetical protein PA2G_05735 [Pseudomonas aeruginosa 2192] gi|9950552|gb|AAG07715.1|AE004849_2 hypothetical protein PA4327 [Pseudomonas aeruginosa PAO1] gi|126170938|gb|EAZ56449.1| hypothetical protein PACG_05180 [Pseudomonas aeruginosa C3719] gi|126198241|gb|EAZ62304.1| hypothetical protein PA2G_05735 [Pseudomonas aeruginosa 2192] gi|218773645|emb|CAW29459.1| hypothetical protein PLES_47051 [Pseudomonas aeruginosa LESB58] Length = 268 Score = 38.2 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 4/55 (7%) Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 Y +G+ Y DQR Y R+V + + + A+ + R + Sbjct: 94 LYQIGLIYMSRYN----DQRDDAKATDYFQRVVREFPGTHAAEHAQARLLAMRQR 144 >gi|322505269|emb|CAM39872.2| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 692 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++++ + +A E +FP + A LM A+ Y G Y +AASL E+ Sbjct: 60 YIRDHQYEEAVELLATQLEEFPRSRAA--VSLM-AYCYYMMGDYGEAASLYEQ 109 >gi|331655157|ref|ZP_08356156.1| cellulose synthase operon protein C [Escherichia coli M718] gi|331047172|gb|EGI19250.1| cellulose synthase operon protein C [Escherichia coli M718] Length = 1157 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 78/236 (33%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + + +V R S V + G+ A ++ + Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663 >gi|298246895|ref|ZP_06970700.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM 44963] gi|297549554|gb|EFH83420.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM 44963] Length = 869 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 13/104 (12%), Positives = 36/104 (34%), Gaps = 10/104 (9%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV--ARKSLLMSAFVQY 105 R + A+LF + + +A + + + +S+ A + + Sbjct: 596 PEHPDIARSLNNLAMLFYDQGKYEQAMPLYQRALHIREQALGSEHPDTARSISNLALIYH 655 Query: 106 SAGKYQQAASLGEEYITQYPE-----SKNVDYVYYLVGMSYAQM 144 G+Y+QA +L + + + ++ + + Y + Sbjct: 656 EQGEYEQAETLYQRALRIREQVLGMEHPDIARALNNLAVLYFEQ 699 >gi|284035520|ref|YP_003385450.1| hypothetical protein Slin_0587 [Spirosoma linguale DSM 74] gi|283814813|gb|ADB36651.1| Tetratricopeptide TPR_2 repeat protein [Spirosoma linguale DSM 74] Length = 1393 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 3/42 (7%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 Y G+Y +A + + ++ P + Y L G S ++ R Sbjct: 1282 YQRGQYTEAIVIYDRFLAGEPAN---AYALNLKGYSLFKLKR 1320 >gi|217076205|ref|YP_002333921.1| tetratricopeptide repeat domain protein [Thermosipho africanus TCF52B] gi|217036058|gb|ACJ74580.1| tetratricopeptide repeat domain protein [Thermosipho africanus TCF52B] Length = 354 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 26/194 (13%), Positives = 68/194 (35%), Gaps = 36/194 (18%) Query: 64 AVLFLKEQNFSKAYEY-FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 ++ + ++ KA Y + ++ + M A Y++AA++ + + Sbjct: 169 GEVYYNQGDYEKAISYWLKEIE----YSPNDIFTYFMIADAYTRMKNYEKAANILNKLLE 224 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 ++ N+ ++ ++ + + + TK I+ P + Sbjct: 225 I--DNNNI--------IAMYELSQ-IYREMGKTKEADMVEKEILNAKPIDPNGIEIWAKI 273 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 +K +Y + + ++ N D+ H + A LV Y+ L Sbjct: 274 K-----------------MKYNKYDEIVEVIEPMIDNTIDSLHLK---ALLVVPYIKLGK 313 Query: 243 MDEAREVVSLIQER 256 ++EAR+ +++ Sbjct: 314 IEEARKYYEELKQN 327 >gi|158334750|ref|YP_001515922.1| TPR repeat-containing serine/threonine protein kinase [Acaryochloris marina MBIC11017] gi|158304991|gb|ABW26608.1| serine/threonine protein kinase with TPR repeats [Acaryochloris marina MBIC11017] Length = 654 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 37/104 (35%), Gaps = 27/104 (25%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD---------YVY--YLVGMSYAQM 144 +LL S + +Y AG YQ A + +E I + +N D Y Y ++ Sbjct: 360 ALLRSGYEKYRAGDYQGAIADYDESIDL--DDQNADAFNERGLAQYGLQNYQAALADYDQ 417 Query: 145 IRDVPYDQ--------RATKLMLQYMSRIVERYT-----NSPYV 175 + DQ TK LQ VE Y NS Y Sbjct: 418 ALKLD-DQHSNAFGNRGLTKHALQDYKGAVEDYNQAIRLNSQYA 460 >gi|149371025|ref|ZP_01890620.1| aerotolerance-related exported protein [unidentified eubacterium SCB49] gi|149355811|gb|EDM44369.1| aerotolerance-related exported protein [unidentified eubacterium SCB49] Length = 259 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 8/82 (9%), Positives = 26/82 (31%), Gaps = 7/82 (8%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAG 108 V++ + ++++ + +A + + + + L A Y Sbjct: 24 VSEAQKNNALFDQGTKHYAAGQYQQAIDSWKLIEKT-----DNESAALYYNLANAYYRLN 78 Query: 109 KYQQAASLGEEYITQYPESKNV 130 K + E+ + P ++ Sbjct: 79 KVAPSIYYYEKALQLAPNDSDI 100 >gi|91093142|ref|XP_969809.1| PREDICTED: similar to Cdc27 CG8610-PA [Tribolium castaneum] gi|270003019|gb|EEZ99466.1| hypothetical protein TcasGA2_TC000032 [Tribolium castaneum] Length = 820 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 35/285 (12%), Positives = 93/285 (32%), Gaps = 41/285 (14%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 + + + +AI + + A L L A L + +++ + + + Sbjct: 438 VESCVQQAILMQKQSAEGL--MVLLRSLGQAYLHLSNFNCKAAIEELNVLPPNQFQTAWI 495 Query: 61 Y-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF--VQYSAGKYQQAASLG 117 Y + + + ++ + +YF++ P+ + M + + K ++L Sbjct: 496 YCLLGLAYFELTDYESSIKYFSKVHNLEPY-----RIQFMDVYSTALWHLQKEVALSALA 550 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV-- 175 ++ I+ S + + G ++ + +++ R V+ PY Sbjct: 551 QDLISLNKNSPVT---WCVSGNCFSL--------HKEHDTAIKFFQRAVQVDPRFPYAYT 599 Query: 176 ---------KGARFYVTVGRN--QLAAKEVE----IGRYYLKRGEYVAAIPRFQLVLANY 220 + ++ RN +L + IG Y K+ Y A + L Sbjct: 600 LLGHEYITTEELDKAMSCFRNAIRLDPRHYNAWFGIGTIYSKQERYHLAEINYSRALEIN 659 Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 + + + AL ++A + ++ P+ ++ Sbjct: 660 PQSSVI---LCHIGIVQHALKQTEKALKTFNVAIANNPKSPLCKF 701 >gi|17555058|ref|NP_499811.1| hypothetical protein T12D8.8 [Caenorhabditis elegans] gi|3879798|emb|CAB03349.1| C. elegans protein T12D8.8, confirmed by transcript evidence [Caenorhabditis elegans] gi|3880220|emb|CAB05818.1| C. elegans protein T12D8.8, confirmed by transcript evidence [Caenorhabditis elegans] Length = 422 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 10/91 (10%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKS 96 S+++ D + +R KA +F A +F P + A+++ Sbjct: 100 MGDSAKEATEDEIEKASEERG---KAQEAFSNGDFDTALTHFTAAIEANPGSAMLHAKRA 156 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 ++ + A + ++ I+ P+S Sbjct: 157 NVLL-----KLKRPVAAIADCDKAISINPDS 182 >gi|53712940|ref|YP_098932.1| hypothetical protein BF1650 [Bacteroides fragilis YCH46] gi|60681152|ref|YP_211296.1| hypothetical protein BF1658 [Bacteroides fragilis NCTC 9343] gi|253563082|ref|ZP_04840539.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|52215805|dbj|BAD48398.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|60492586|emb|CAH07358.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343] gi|251946858|gb|EES87140.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|301162641|emb|CBW22188.1| conserved hypothetical protein [Bacteroides fragilis 638R] Length = 91 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 33/92 (35%), Gaps = 11/92 (11%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L + + G + A EE++ P K D YYL+G +Y ++ + Sbjct: 3 QLKTIKELINQGDIENALQALEEFLQTEPVGK--DEAYYLMGNAYRKL--------GDWQ 52 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 L +E +SP AR V N Sbjct: 53 KALNNYQSAIELNPDSP-ALQARKMVMDILNF 83 >gi|88861397|ref|ZP_01136027.1| hypothetical protein PTD2_04856 [Pseudoalteromonas tunicata D2] gi|88816663|gb|EAR26488.1| hypothetical protein PTD2_04856 [Pseudoalteromonas tunicata D2] Length = 540 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 82/217 (37%), Gaps = 35/217 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 L L +N+++A Y + + P V + +L+ A + + ++ ++ Sbjct: 242 GKLELHLKNYNEAQIYLSSATDMSPRNIVRQNTLVNVARLNHDYEQHYDTNRAILKFAK- 300 Query: 124 YPES--KNVDYVYYL----VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + ++ YL G+ YA R T+ ++Y+S + +++ + Sbjct: 301 HSIHDCPDI----YLNVARAGVDYALTTEQSELITRLTRQTMEYLSELKQQFPD----AD 352 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLK--RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + + + R +L +YLK R + VA I ++ + ++ + + + Sbjct: 353 TQEQLDIVRARL---------HYLKDERDKAVALIN---QLVEDDGPIRSVDDTLDK-AK 399 Query: 236 AYVALALMDEAREVVSLIQE---RYP--QGYWARYVE 267 A L A E+ I E +YP + Y+ Sbjct: 400 ALHELGFHQRASELFEKIAEHCAKYPVKDSTFIAYIS 436 >gi|191165276|ref|ZP_03027119.1| cellulose synthase operon protein C [Escherichia coli B7A] gi|300815254|ref|ZP_07095479.1| tetratricopeptide repeat protein [Escherichia coli MS 107-1] gi|309796168|ref|ZP_07690579.1| tetratricopeptide repeat protein [Escherichia coli MS 145-7] gi|331679608|ref|ZP_08380278.1| cellulose synthase operon protein C [Escherichia coli H591] gi|190904678|gb|EDV64384.1| cellulose synthase operon protein C [Escherichia coli B7A] gi|300532146|gb|EFK53208.1| tetratricopeptide repeat protein [Escherichia coli MS 107-1] gi|308120229|gb|EFO57491.1| tetratricopeptide repeat protein [Escherichia coli MS 145-7] gi|331072780|gb|EGI44105.1| cellulose synthase operon protein C [Escherichia coli H591] Length = 1157 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + +V R S V + G+ A ++ + Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 6.3, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|324014177|gb|EGB83396.1| tetratricopeptide repeat protein [Escherichia coli MS 60-1] Length = 1157 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 77/235 (32%), Gaps = 34/235 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ + Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAHINSLPHAQ 559 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198 ++ + +V R N ++ A G+ A ++ + Sbjct: 560 WN--------SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 611 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663 >gi|319953090|ref|YP_004164357.1| gliding motility protein spre [Cellulophaga algicola DSM 14237] gi|319421750|gb|ADV48859.1| protein involved in gliding motility SprE [Cellulophaga algicola DSM 14237] Length = 850 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 86/259 (33%), Gaps = 46/259 (17%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY------EKAVLFLKEQNFSK 75 F L + V + +Y E+ L ++ Sbjct: 5 FKLIAALVFGGVLFNACSTKKDAFVNRNWHALNTKYNVLYNGNIAFEEGREELNA-SYQD 63 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP-------ESK 128 Y+ P + + ++ + K++ A + I ++ + Sbjct: 64 --NYWEVL----PIERITIREEIIL-DSENKNPKFELAEEKATKAIQKHSMEIKDTERNP 116 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 D + L+G + R +P L+ + I+ +Y S + A + + Sbjct: 117 QTDEAFLLLGKTRYFEQRFLP--------ALEAFNYILRKYPKSDKLNEASIWREKVNIR 168 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 L E+ + LKR + +F+ VL + + +A A + +AY+ L+ +D A + Sbjct: 169 LENDELALKN--LKR------LFKFE-VLED----QEYADAKAMMAQAYINLSKIDTAIQ 215 Query: 249 VVSLI----QERYPQGYWA 263 + + ++ +G + Sbjct: 216 NLKVASAYTKKNPEKGRYY 234 >gi|313499294|gb|ADR60660.1| Cellulose synthase subunit BcsC [Pseudomonas putida BIRD-1] Length = 1172 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 53/165 (32%), Gaps = 17/165 (10%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 +A + + +P + R++L F + + A ++ ++ P +++ Sbjct: 161 GQRPEAIRQLQRLDQQYPGSAGLRQTLAGWLFAEKRDRE---ALAVLDQLARD-PGARDA 216 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 AQ D Q + ++RY SP + A + R LA Sbjct: 217 A----------AQREFDYLSGQAVSATSAAAWQAFLQRYPASPLLAQASETLQQQRKLLA 266 Query: 191 AKEVEI---GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 + G+ L +G A + + L Y A+ Sbjct: 267 DPAWQAGQRGKALLDKGRNAEAETQLRRALRQYPGDAGLYGALGY 311 >gi|300922355|ref|ZP_07138477.1| tetratricopeptide repeat protein [Escherichia coli MS 182-1] gi|301326679|ref|ZP_07220003.1| tetratricopeptide repeat protein [Escherichia coli MS 78-1] gi|300421295|gb|EFK04606.1| tetratricopeptide repeat protein [Escherichia coli MS 182-1] gi|300846654|gb|EFK74414.1| tetratricopeptide repeat protein [Escherichia coli MS 78-1] Length = 1157 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + +V R S V + G+ A ++ + Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|281337835|gb|EFB13419.1| hypothetical protein PANDA_011292 [Ailuropoda melanoleuca] Length = 602 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 72/225 (32%), Gaps = 33/225 (14%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + + EK + K+ + +A E + + P+ V A + K+ Sbjct: 129 DSQKALALKEKGNKYFKQGKYDEAIECYTKGMDADPYNPVLPT---NRASAYFRLKKFAV 185 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYA--QMIRDVPYD-------QRATKLMLQYMS 163 A S I S Y G + Q + D D + + + Sbjct: 186 AESDCNLAIALN-RSYTKAYA--RRGAARFALQKLEDAKKDYEKVLELEPNNFEAMNELK 242 Query: 164 RIVERYT--NSPYVKGARFYVTVG-----------RNQLAAKEVEIGRYYLKRGEYVAAI 210 +I + + Y K A + Q A E ++G + K G+Y AI Sbjct: 243 KINQALPSKENSYPKEADTMIKSTEGEKKQIEEQQNKQQAISEKDLGNGFFKEGKYERAI 302 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE--VVSLI 253 + +A A + AY+ + +EA + +++ Sbjct: 303 ECYTRGIAA-DGTNALLPANRAM--AYLKIQKYEEAEKDCTQAIL 344 >gi|218697240|ref|YP_002404907.1| cellulose synthase subunit BcsC [Escherichia coli 55989] gi|218353972|emb|CAV00437.1| cellulose synthase subunit [Escherichia coli 55989] Length = 1157 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + +V R S V + G+ A ++ + Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663 >gi|218294788|ref|ZP_03495642.1| Tetratricopeptide TPR_2 repeat protein [Thermus aquaticus Y51MC23] gi|218244696|gb|EED11220.1| Tetratricopeptide TPR_2 repeat protein [Thermus aquaticus Y51MC23] Length = 447 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 7/81 (8%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 EKA LK ++ KA + + + ++ L + AG+ ++A ++ Sbjct: 23 EKAEALLKAGDYEKAALAYEEVLAQD-YGLF--EAHLGLGVALFRAGRLEEARFAFDQMT 79 Query: 122 TQYP----ESKNVDYVYYLVG 138 +P N+ VY +G Sbjct: 80 RVFPDRYEGHFNLGQVYLRLG 100 >gi|124006916|ref|ZP_01691745.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134] gi|123987369|gb|EAY27089.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134] Length = 998 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 38/250 (15%), Positives = 75/250 (30%), Gaps = 84/250 (33%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + +A + + A+ +L+ ++ G++ +A + + Y K + Sbjct: 213 YVRAISLWEKM------GNHAQTALIYNDKGYLYQRMGEFAKALYAHNKALALY---KRI 263 Query: 131 DYV-------------------------YYLVGM-------------SYAQMIRDVPYDQ 152 +Y+ YY + S Q I + DQ Sbjct: 264 NYIKGCSRVYFGLGSLYWRQNKYTQAIKYYRQALQIDLQLNRQMHAASAYQNIGGLYSDQ 323 Query: 153 RATKLMLQYMSRIVERYTNS---------------------PY--VKGARFYVTVGRNQL 189 K L Y + +E S Y + + +NQL Sbjct: 324 AKYKEALHYYRKSLEIRLKSGNKYQIAKSYLYIGQVYKNKNEYNKARKYYLKIIAMKNQL 383 Query: 190 AAKEVEIGRYY-------LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 ++ I + Y G Y A+ +Q L+ Y H EE + Y A+ + Sbjct: 384 -NDDIHIAKTYYGLGVTYWYSGNYPKALDYYQKALSTYQKNNHKEE----IARCYDAIGI 438 Query: 243 MDEAREVVSL 252 + ++ +L Sbjct: 439 VHAQQQNYAL 448 >gi|157963334|ref|YP_001503368.1| hypothetical protein Spea_3520 [Shewanella pealeana ATCC 700345] gi|157848334|gb|ABV88833.1| hypothetical protein Spea_3520 [Shewanella pealeana ATCC 700345] Length = 454 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 18/56 (32%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 L+ + + A + +A + M + Y G+YQ A L Sbjct: 108 NLGHSQLQLEQYKAAIATLTRLKLSMLDEPIAAQIRYMRGYAHYQLGQYQAAIDLL 163 >gi|332290809|ref|YP_004429418.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] gi|332168895|gb|AEE18150.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5] Length = 674 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 8/53 (15%), Positives = 21/53 (39%), Gaps = 6/53 (11%) Query: 62 EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 +K F + +++ A +Y+ ++ +++ L Y Y+ A Sbjct: 22 QKGDRFFNKGDYASAAKYYEVALRKNN-----SKEILGKLIDAYYLDQDYRSA 69 >gi|328874451|gb|EGG22816.1| hypothetical protein DFA_04946 [Dictyostelium fasciculatum] Length = 408 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 47/143 (32%), Gaps = 19/143 (13%) Query: 49 DSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQY 105 D + D + Y+ F ++Q + A EY+ P + + +++ Sbjct: 67 DPMFDNVSESLKYKDIGNKFFQQQKYKDAVEYYTLAIDLDPSSSILFSNRAI-----AYI 121 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + QA + I +S NV Y+ G++ + Q+ + L + Sbjct: 122 KLKNFHQAEADCNRSINL--DSTNVK-AYHRRGLALKE--------QKRYRESLNDFIVV 170 Query: 166 VERYTNSPYVKGARFYVTVGRNQ 188 ++ + + + + Sbjct: 171 SKKDPANKEAQTEIKGLYELIKR 193 >gi|310778588|ref|YP_003966921.1| TPR repeat-containing protein [Ilyobacter polytropus DSM 2926] gi|309747911|gb|ADO82573.1| TPR repeat-containing protein [Ilyobacter polytropus DSM 2926] Length = 363 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 35/130 (26%), Gaps = 28/130 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAA 114 + + LK Q+++ A E +N+ P Y G Y A Sbjct: 250 NRGMAKLKLQDYNGAMEDYNKVIESDP----------DYEVAYYRRGLVKTKLRDYHGAL 299 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + I N YY G+ ++ L+ + ++ N Sbjct: 300 EDYNKVIKL---DPNFKQAYYNRGIIKTKL--------GDFDGALEDFGKTIKLDPNDKD 348 Query: 175 VKGARFYVTV 184 K + Sbjct: 349 AKEMHKKFQL 358 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 28/209 (13%), Positives = 60/209 (28%), Gaps = 48/209 (22%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94 ++G + + + LD Y + + +F A E F++ P Sbjct: 57 IIGSRKDYDKTIQLDPEFKYAYD----NRGISKGDLGDFEGAVEDFDKAIELDP------ 106 Query: 95 KSLLMSAFVQ-------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 + G + A + ++ I P+ K Y+ G + Sbjct: 107 ----KFIYAYSNRGFTKTKLGDLEGAIADYDKAIKLNPKFKL---AYFNRGNAKYFSDD- 158 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------- 199 K + S+++ S A + + +L + I Y Sbjct: 159 -------YKGAINDYSKVINIDPKSQ---VAYNNRGLAKWELGEYKSSIEDYNKAIRLDP 208 Query: 200 -----YLKRGEYVAAIPRFQLVLANYSDA 223 Y RG A + ++ + +Y+ Sbjct: 209 KYKLSYNNRGFTKAQLKDYKGAINDYNKT 237 >gi|260576642|ref|ZP_05844629.1| tol-pal system protein YbgF [Rhodobacter sp. SW2] gi|259021127|gb|EEW24436.1| tol-pal system protein YbgF [Rhodobacter sp. SW2] Length = 272 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 13/130 (10%), Positives = 39/130 (30%), Gaps = 10/130 (7%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ +++A L +F A F + + + ++ + G+ AA Sbjct: 149 EQADFDRARAVLDSGDFRTAANQFATFATTYTGGPLTYEAHFLRGEALGKLGETADAARA 208 Query: 117 G-EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + P+ +G + + + ++ + R+ S Sbjct: 209 YLDAFSGA-PDGPRAAASLLKLGQALGTLGQGP--------EACVTLAEVGTRFPGSTEA 259 Query: 176 KGARFYVTVG 185 A+ + Sbjct: 260 SDAQSAMQGL 269 >gi|242279843|ref|YP_002991972.1| SpoIID/LytB domain protein [Desulfovibrio salexigens DSM 2638] gi|242122737|gb|ACS80433.1| SpoIID/LytB domain protein [Desulfovibrio salexigens DSM 2638] Length = 538 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 9/111 (8%) Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 +Y + + T Y A+ N + K + + + A +++V N Sbjct: 57 KYFEALEQYDTAVDYSPVAKTR----VNAMFGKAMVLSTF---LDAPEKAADVYRMVGRN 109 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 Y D +A+ A+ RL Y + D A V +P+G + E ++ Sbjct: 110 YPD--YADTALYRLGFLYYQMDRYDRANSVFRQYLRYFPKGKFKYQAEAVI 158 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 KA + + R++P A +L F+ Y +Y +A S+ +Y+ +P Sbjct: 97 EKAADVYRMVGRNYP--DYADTALYRLGFLYYQMDRYDRANSVFRQYLRYFP 146 >gi|254410191|ref|ZP_05023971.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196183227|gb|EDX78211.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 273 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 47/162 (29%), Gaps = 35/162 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + + + KA + Q + P +A G+++ A + ++ I Sbjct: 116 NRGTAYEGKGEWQKAIADYRQVLQINPDDAMAYN---NLGNANAGKGEWEAAIANYQKAI 172 Query: 122 TQYPESKNV----DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 P Y +G K + + +++ +Y P V+ Sbjct: 173 DLSPNFAFARANHALALYQIG---------------EKKEAILELRKLIRKYPQFPDVRA 217 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP---RFQLV 216 A E +VAAI R++ + Sbjct: 218 ALTAALWVNGNQGEAE----------SNWVAAIGLDQRYKDI 249 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 37/289 (12%), Positives = 89/289 (30%), Gaps = 63/289 (21%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSS--RDVYLDSVTDVRYQR--EVYEKAVLFLKEQNFS 74 + ++ +++ + V G S + +T + ++ E+ +KA + F+ Sbjct: 1 MKRWIVSLCGIVLVLVCSGLWITPSVMAQAQIPDLTQAQIEQLNELRQKAFTATQLGEFA 60 Query: 75 KAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 A Y+ Q P + + + S K +A + + I P++ + Y Sbjct: 61 TAEAYWTQLIELLPDNPVGWSNR-----GNARVSQNKLDEAIADFNQSIQLAPDAPD-PY 114 Query: 133 -----VY-----YLVGMSYAQMIRDVPYDQRAT--------------KLMLQYMSRIVER 168 Y + ++ + + + D + + + ++ Sbjct: 115 LNRGTAYEGKGEWQKAIADYRQVLQINPDDAMAYNNLGNANAGKGEWEAAIANYQKAIDL 174 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 N + + A + + + GE AI + ++ Y Sbjct: 175 SPNFAFAR-------------ANHALAL----YQIGEKKEAILELRKLIRKYPQFPDVRA 217 Query: 229 AMARLVEAYVALALMDEARE--VVSL-IQERYPQGYW----ARYVETLV 270 A+ A EA V ++ + +RY W R+ +V Sbjct: 218 AL---TAALWVNGNQGEAESNWVAAIGLDQRYKDIDWVENIRRWPPAMV 263 >gi|170051662|ref|XP_001861867.1| tetratricopeptide repeat domain 21B [Culex quinquefasciatus] gi|167872823|gb|EDS36206.1| tetratricopeptide repeat domain 21B [Culex quinquefasciatus] Length = 1325 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 34/122 (27%), Gaps = 40/122 (32%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-------------------AGVAR-------- 94 A ++++ NF+KA E + P+ A+ Sbjct: 665 ATADFYMQQGNFNKAVELLKNIRPNQPYYVQAKTKMAQFYLVHKKDRLTYAQCFRELVAN 724 Query: 95 ----KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV------DYV---YYLVGMSY 141 S LM S + A ++ Q P + YV Y ++Y Sbjct: 725 CPGPSSYLMLGDAYMSIQEPDDAIEAYKQAHKQNPRDSLLASKLGRAYVKTHQYKKAIAY 784 Query: 142 AQ 143 Q Sbjct: 785 YQ 786 >gi|218961254|ref|YP_001741029.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] gi|167729911|emb|CAO80823.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] Length = 391 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 34/118 (28%), Gaps = 14/118 (11%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ-YPESKNV 130 +++ A R P A KS + A K A + + + + Sbjct: 146 DYATAISNCENYLRLAPRGEFAEKSYYLIADCYLEQKKAYSAVATL---LKLQNAKLPEM 202 Query: 131 D--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 D Y YY +G +Y + + + + E+ S + + Sbjct: 203 DEQYFYYRLGYAYELSDKPID--------AIAAYRKGYEQDPYSQVAYQIEDRILELK 252 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 27/103 (26%), Gaps = 32/103 (31%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFV--------------------------QYS- 106 A FP + A+KSLL + + Sbjct: 79 EDAISAHQWLIEKFPKSPYAQKSLLELGKIFILDRKIEEATLYLRRITSPEIIERFYWLG 138 Query: 107 -----AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 Y A S E Y+ P + + YYL+ Y + Sbjct: 139 LCAWWNDDYATAISNCENYLRLAPRGEFAEKSYYLIADCYLEQ 181 >gi|66511128|ref|XP_394637.2| PREDICTED: n-alpha-acetyltransferase 15, NatA auxiliary subunit-like isoform 1 [Apis mellifera] Length = 856 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 29/127 (22%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAF 102 D Y D + D +E Y L L+ + +++A + + + P AR + Sbjct: 212 DKYSDQICDKVTVKETY--GKLRLQLKQYAEAAQVYKELLNINPENTTYYARLAEAE--- 266 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 K ++ ++ + Y +P ++ P + + Sbjct: 267 ---RHTKPEETLAMLQRYEELFP-----------RALA--------PRRLQLNYAVEDEF 304 Query: 163 SRIVERY 169 +V+RY Sbjct: 305 KTLVDRY 311 >gi|83955686|ref|ZP_00964266.1| TPR domain protein [Sulfitobacter sp. NAS-14.1] gi|83839980|gb|EAP79156.1| TPR domain protein [Sulfitobacter sp. NAS-14.1] Length = 188 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 25/69 (36%), Gaps = 7/69 (10%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117 +Y + + E + + A + + P FA ++ ++AG Y A Sbjct: 71 LYSRGREAMSEGDTTLAIAHLTALTDHAPDFAEGYHARAQ-----AYFAAGLYGPAIDDL 125 Query: 118 EEYITQYPE 126 E + P+ Sbjct: 126 ETTLALNPQ 134 >gi|330509110|ref|YP_004385538.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6] gi|328929918|gb|AEB69720.1| TPR-repeat protein [Methanosaeta concilii GP-6] Length = 722 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 37/277 (13%), Positives = 85/277 (30%), Gaps = 67/277 (24%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSL 97 S D+ S D + + + + + +A + F++ ++ + F K Sbjct: 314 NGSADLQEGSFEDNSAEDW-FNRGQELQRNDSHEEALQAFDKAIEINQSYAF-AWGGK-- 369 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYP--------------------ESKNVDYVYYL- 136 +V Y+ G+Y++A + + I P ++ Y Sbjct: 370 ---GYVLYNMGRYEEAIAAWDRAIELEPDEFYSGSKWEMKGKVLAILGRNEESAQAYERA 426 Query: 137 -----VGMSYAQMIRDVPY------------DQRATKLMLQYMSRIVERYTNSPYVKGAR 179 ++ + D+ DQ L+ ++ + + Sbjct: 427 LELADKAVTEYKTSTDLNLSAAWGFKGQLLDDQGRYVEALEAVANSSKANPEDAFAWAV- 485 Query: 180 FYVTVGRNQLAAKEVEIGRYY------------LKRGEY-VAAIPRFQLVLANYSDAEHA 226 + ++L I Y L+ Y +A++ R++ L Y+ A Sbjct: 486 -MGDILADRLGRYNESIESYNKSLEIDPKNIGALRGEGYALASLGRYEEALEYYNRALEI 544 Query: 227 EEAMAR----LVEAYVALALMDEAREVVSLIQERYPQ 259 + AR L +A + + +E+ + PQ Sbjct: 545 DSRFARAWQGLGDALRNMGMYNESIQAYDRAIAEMPQ 581 >gi|262197060|ref|YP_003268269.1| hypothetical protein Hoch_3877 [Haliangium ochraceum DSM 14365] gi|262080407|gb|ACY16376.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM 14365] Length = 378 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 26/90 (28%), Gaps = 6/90 (6%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 + + R ++ KA + F +A EYF + P L A Sbjct: 42 KASPQDEEDPERRRQISALFRKAQTAYDLREFDQAIEYFKELYTLSPHEAF----LYNIA 97 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVD 131 AG Q A + Y+ D Sbjct: 98 QSYRQAGDCQNALYFYKRYVAV--GGPEAD 125 >gi|220919579|ref|YP_002494883.1| hypothetical protein A2cp1_4500 [Anaeromyxobacter dehalogenans 2CP-1] gi|219957433|gb|ACL67817.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 291 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 37/128 (28%), Gaps = 25/128 (19%) Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ-RATKLMLQY 161 G Y A + I+ +P G + D+ D+ + Sbjct: 78 SYLELGDYPSALAYYRRIISLHPGGPEAHEA---RG-----RLGDIFRDRYGDHLAAITQ 129 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + + +SP ++E+ YL + A +++ + Sbjct: 130 YADVAGS--DSPDAP--------------RYQLEVAHEYLALKRWEQARTEARILREKWP 173 Query: 222 DAEHAEEA 229 E A+EA Sbjct: 174 THELADEA 181 >gi|270308285|ref|YP_003330343.1| hypothetical protein DhcVS_891 [Dehalococcoides sp. VS] gi|270154177|gb|ACZ62015.1| hypothetical protein DhcVS_891 [Dehalococcoides sp. VS] Length = 123 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 22/72 (30%), Gaps = 9/72 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR---KSLLMSAFVQYSAGKYQQAASLG 117 Y + ++ NF A ++ + A + F ++ +Y +A S Sbjct: 24 YNQGNDKARQGNFGIAINFYTKAIS------YAAGFNLAYTNRGFAYFALKEYSKAISDC 77 Query: 118 EEYITQYPESKN 129 I P Sbjct: 78 NYAIRLNPNDPE 89 >gi|159043750|ref|YP_001532544.1| tetratricopeptide repeat-containing protein [Dinoroseobacter shibae DFL 12] gi|157911510|gb|ABV92943.1| tetratricopeptide TPR_2 repeat protein [Dinoroseobacter shibae DFL 12] Length = 183 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 29/81 (35%), Gaps = 7/81 (8%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGK 109 + + ++ + +E +F+ A E F+ P +A +++ F ++ + Sbjct: 63 APDAAAQALLDEGMRKRREYDFAGAVEVFDALIAYCPDYAEGWNQRA-----FARFLQDR 117 Query: 110 YQQAASLGEEYITQYPESKNV 130 Y A + + P Sbjct: 118 YDAALGDLDRALALSPTHTAA 138 >gi|157164051|ref|YP_001466112.1| TPR repeat-containing protein [Campylobacter concisus 13826] gi|112800522|gb|EAT97866.1| tetratricopeptide repeat domain protein [Campylobacter concisus 13826] Length = 802 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 3/83 (3%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +D Y +Y A +LK+ S A + S + + + + L A Y G+ Sbjct: 263 PSDENYPEVLYLIARAYLKDSIASDAKYMLDILSEEHAESKFTKLATLDYADYLYKIGRQ 322 Query: 111 QQAASLGEEYITQYPESKNVDYV 133 ++A S E+ Y + ++D Sbjct: 323 KEALSDYEK--VLYSTN-DIDLA 342 >gi|157126389|ref|XP_001654614.1| fk506-binding protein [Aedes aegypti] gi|108873300|gb|EAT37525.1| fk506-binding protein [Aedes aegypti] Length = 398 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 6/91 (6%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 L ++ + A+C+ + ++D +++ D + + +Y + L +F KA E FN Sbjct: 293 LAVYLNKALCYQKLNDHDEAKDACNEALNIDKKSVKALYRRGQSRLSLGDFEKALEDFNA 352 Query: 83 CSRDFPFAGVARKSLLMSA-FVQYSAGKYQQ 112 P K+ L A + Y + Sbjct: 353 VREIEPEN----KAALNQATICKQKIKDYNE 379 >gi|191170612|ref|ZP_03032165.1| cellulose synthase operon protein C [Escherichia coli F11] gi|300976750|ref|ZP_07173569.1| tetratricopeptide repeat protein [Escherichia coli MS 200-1] gi|190909420|gb|EDV69006.1| cellulose synthase operon protein C [Escherichia coli F11] gi|300308487|gb|EFJ63007.1| tetratricopeptide repeat protein [Escherichia coli MS 200-1] Length = 1157 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 77/235 (32%), Gaps = 34/235 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ + Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAHINSLPHAQ 559 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198 ++ + +V R N ++ A G+ A ++ + Sbjct: 560 WN--------SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 611 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 612 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663 >gi|302386876|ref|YP_003822698.1| TPR repeat-containing protein [Clostridium saccharolyticum WM1] gi|302197504|gb|ADL05075.1| TPR repeat-containing protein [Clostridium saccharolyticum WM1] Length = 259 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 27/96 (28%), Gaps = 12/96 (12%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 +A+ +G +D + L + N+ A E F+Q Sbjct: 9 AAILGLALTIAIGAGGCGKKDNKYSFR----------NAGIEALNQGNYDAAVEAFDQAI 58 Query: 85 RDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGE 118 L A QY AG Y AA + Sbjct: 59 SSSKGLVGKFDVDVLKYRAEAQYLAGDYSSAADTYD 94 >gi|224824221|ref|ZP_03697329.1| Tetratricopeptide TPR_2 repeat protein [Lutiella nitroferrum 2002] gi|224603640|gb|EEG09815.1| Tetratricopeptide TPR_2 repeat protein [Lutiella nitroferrum 2002] Length = 378 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 8/75 (10%) Query: 61 YEKAVLFL-----KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 Y +A L + + A F + P + L + Y G Y +AA+ Sbjct: 77 YAEAHNALGALYAAQGRYDMAIAEFQKALTTSPGSPH---FLNNLGYTLYLQGHYAEAAA 133 Query: 116 LGEEYITQYPESKNV 130 + E+ + P + Sbjct: 134 IYEKAVALSPSDLKI 148 Score = 35.5 bits (81), Expect = 8.5, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 13/91 (14%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 Y+ + + KA F + + A A +L + + G+Y Sbjct: 42 DSPAAYYQLGRYYQGQNRADKAIPAFQKALALDSQYAEAHNALGAL----YA--AQGRYD 95 Query: 112 QAASLGEEYITQYPESK----NVDYVYYLVG 138 A + ++ +T P S N+ Y YL G Sbjct: 96 MAIAEFQKALTTSPGSPHFLNNLGYTLYLQG 126 >gi|218702295|ref|YP_002409924.1| cellulose synthase subunit BcsC [Escherichia coli IAI39] gi|218372281|emb|CAR20144.1| cellulose synthase subunit [Escherichia coli IAI39] Length = 1157 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + +V R S V + G+ A ++ + Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 6.0, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|149048292|gb|EDM00868.1| rCG62684, isoform CRA_a [Rattus norvegicus] Length = 251 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 2/89 (2%) Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLK 69 I +A +L AL+ +I C L Q + D L+++ D + +Y KA + Sbjct: 141 IEKADVSRLQPIALSCVLNIGACKLKMSNWQGAIDSCLEALEMDPSNTKALYRKAQGWQG 200 Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + + +A + P A ++ L Sbjct: 201 LKEYDQALADLKKAQEIAP-GDKAIQAEL 228 >gi|42521721|ref|NP_967101.1| hypothetical protein Bd0075 [Bdellovibrio bacteriovorus HD100] gi|39574251|emb|CAE77755.1| conserved hypothetical protein with TPR-domain [Bdellovibrio bacteriovorus HD100] Length = 981 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 33/94 (35%), Gaps = 9/94 (9%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR---DFPFAGV 92 +G ++ + +V D +++ L+L+ F +A + F + R ++P Sbjct: 776 LGLNDKALKAFLSAAVLDPTDGEALFQAGKLYLETSRFEEAIQQFKRVQRLNANYPRTHY 835 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 +++G + A + P Sbjct: 836 ------YIGKAAFASGDFATALEASKSEKKLNPN 863 >gi|325279773|ref|YP_004252315.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter splanchnicus DSM 20712] gi|324311582|gb|ADY32135.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter splanchnicus DSM 20712] Length = 561 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 26/111 (23%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y ++ ++ ++KA Y K + A+ Q + A + Sbjct: 452 YNMGLILMQNGEYAKAIPYLKD------------KPNINLAYAQLMNNDNRAALETFRK- 498 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 I ++ +DY Y+ ++ A I+D TK M + + ++ + Sbjct: 499 IKM--QN-AMDY--YMQAVA-AARIKD-------TKEMAVSLQKAIQMQPD 536 >gi|298387597|ref|ZP_06997149.1| TPR domain-containing protein [Bacteroides sp. 1_1_14] gi|298259804|gb|EFI02676.1| TPR domain-containing protein [Bacteroides sp. 1_1_14] Length = 734 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 39/107 (36%), Gaps = 17/107 (15%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSR----DFPFAGVARKSLLMSAFVQYSAGKYQ 111 + ++ A +LK++ +++A E + + A +K + KY Sbjct: 497 SEDILFPIADFYLKKERWNEAIEVYEEMETIGALQGRGAEYYQK----LGYALQKNKKYA 552 Query: 112 QAASLGEEYITQYP----ESKNVDYVY-----YLVGMSYAQMIRDVP 149 +A + T P ++++ Y Y +SY + + + Sbjct: 553 EAIDAYLKADTLKPDNIWNNRHLAICYRLNRNYQAALSYYKKVEEAT 599 >gi|254412715|ref|ZP_05026488.1| Transglycosylase SLT domain protein [Microcoleus chthonoplastes PCC 7420] gi|196180450|gb|EDX75441.1| Transglycosylase SLT domain protein [Microcoleus chthonoplastes PCC 7420] Length = 789 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 35/163 (21%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 M A + KY QA++ + PE+ N Y + +AQ D Sbjct: 297 MIAVGYWRDRKYGQASAAYAK----APETSNNAY-LVARALKFAQQYAD----------A 341 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + ++V + ++ A + + + A+P V+ Sbjct: 342 KRAYKQMVSDFPDAEETPAALVELAQLQPD------------------IEAVPYLDEVVE 383 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + E A EA+ E L A E + + Y + Sbjct: 384 RFP--ERAGEALLVKAETLERLGSYQAAEEARKQLIDEYGESD 424 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 72/214 (33%), Gaps = 30/214 (14%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + + +A+ F ++ ++ A + Q DFP A +L+ A Sbjct: 317 KAPETSNNAYLVARALKFAQQ--YADAKRAYKQMVSDFPDAEETPAALVELA----QLQP 370 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 +A +E + ++P + + + ++ + + + ++++ Y Sbjct: 371 DIEAVPYLDEVVERFP--ERAGEALLVKAETLERL--------GSYQAAEEARKQLIDEY 420 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 S + AA ++ R + + G AA + + A +A Sbjct: 421 GES--------------DAAAAYRWQVARSHAESGNVEAAWEWAKPITTENPHRFLARQA 466 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + + L +A+ + +PQ Y+A Sbjct: 467 GFWVGKWARELGHRQDAQAAFEQVITNHPQSYYA 500 >gi|251794204|ref|YP_003008935.1| hypothetical protein Pjdr2_0168 [Paenibacillus sp. JDR-2] gi|247541830|gb|ACS98848.1| TPR repeat-containing protein [Paenibacillus sp. JDR-2] Length = 581 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 3/69 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A L+E F++A + + P AR A Y G + +A + E + Sbjct: 160 DQARKLLEEGKFTEAVRILEKIIEEQPEFLAARN---NLALAYYYMGMFDKAMATIREAL 216 Query: 122 TQYPESKNV 130 P + + Sbjct: 217 ELEPGNLHA 225 >gi|148683515|gb|EDL15462.1| mCG20642 [Mus musculus] Length = 335 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 2/99 (2%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQRE 59 + V I +A +L AL+ +I C L Q + D L+++ D + Sbjct: 215 LRYVDSSKAVIEKADRSRLQPIALSCVLNIGACKLKMSNWQGAIDSCLEALEMDPSNTKA 274 Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +Y KA + + + +A + P A ++ L Sbjct: 275 LYRKAQGWQGLKEYDQALADLKKAQEIAP-GDKAIQAEL 312 >gi|74151669|dbj|BAE29632.1| unnamed protein product [Mus musculus] gi|74185251|dbj|BAE30104.1| unnamed protein product [Mus musculus] Length = 370 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 2/99 (2%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQRE 59 + V I +A +L AL+ +I C L Q + D L+++ D + Sbjct: 250 LRYVDSSKAVIEKADRSRLQPIALSCVLNIGACKLKMSNWQGAIDSCLEALEMDPSNTKA 309 Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +Y KA + + + +A + P A ++ L Sbjct: 310 LYRKAQGWQGLKEYDQALADLKKAQEIAP-GDKAIQAEL 347 >gi|13385854|ref|NP_080628.1| peptidyl-prolyl cis-trans isomerase D [Mus musculus] gi|23396571|sp|Q9CR16|PPID_MOUSE RecName: Full=Peptidyl-prolyl cis-trans isomerase D; Short=PPIase D; AltName: Full=40 kDa peptidyl-prolyl cis-trans isomerase; AltName: Full=Cyclophilin-40; Short=CYP-40; AltName: Full=Rotamase D gi|12834051|dbj|BAB22767.1| unnamed protein product [Mus musculus] gi|12851478|dbj|BAB29056.1| unnamed protein product [Mus musculus] gi|15079319|gb|AAH11499.1| Peptidylprolyl isomerase D (cyclophilin D) [Mus musculus] gi|18044681|gb|AAH19778.1| Peptidylprolyl isomerase D (cyclophilin D) [Mus musculus] gi|26342048|dbj|BAC34686.1| unnamed protein product [Mus musculus] Length = 370 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 2/99 (2%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQRE 59 + V I +A +L AL+ +I C L Q + D L+++ D + Sbjct: 250 LRYVDSSKAVIEKADRSRLQPIALSCVLNIGACKLKMSNWQGAIDSCLEALEMDPSNTKA 309 Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +Y KA + + + +A + P A ++ L Sbjct: 310 LYRKAQGWQGLKEYDQALADLKKAQEIAP-GDKAIQAEL 347 >gi|332345495|gb|AEE58829.1| cellulose synthase operon protein C [Escherichia coli UMNK88] Length = 1157 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + +V R S V + G+ A ++ + Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREP---ANADAILGLTEVDIAAGDKAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|322502894|emb|CBZ37976.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 622 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 12/80 (15%) Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAE-----HAEEAMARLVEAYVALALMDEAREV 249 IGR ++ EY AA F A Y E E++ L Y L +DEA + Sbjct: 53 NIGRVFIDMKEYGAAENAFTEAAAIYEQVEGDKSLEYAESLELLAFCYTHLKFLDEAEKA 112 Query: 250 ----VSLIQ---ERYPQGYW 262 + + + Y W Sbjct: 113 FKDSIRIFRDQCYNYGNNSW 132 >gi|320193957|gb|EFW68590.1| Cellulose synthase operon protein C [Escherichia coli WV_060327] Length = 1140 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 77/235 (32%), Gaps = 34/235 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 426 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 482 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ + Sbjct: 483 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAHINSLPHAQ 542 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----------EVEIGR 198 ++ + +V R N ++ A G+ A ++ + Sbjct: 543 WN--------SNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQPPSSRIDLTLAD 594 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 595 WAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 646 >gi|225563392|gb|EEH11671.1| transcriptional repressor [Ajellomyces capsulatus G186AR] Length = 876 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 44/143 (30%), Gaps = 22/143 (15%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108 D + Y ++ + + KAYE + Q P + Y Sbjct: 219 ADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 272 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y+ A I P + V+Y +G + + + D L R + Sbjct: 273 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQTND------ALDAYRRAADL 322 Query: 169 YTNSPYVKGARFYVTVGRNQLAA 191 + ++ + + + ++ A Sbjct: 323 DPTNTHI---KSRLQLLQSGQAG 342 >gi|167041671|gb|ABZ06416.1| putative TPR domain protein [uncultured marine microorganism HF4000_009L19] Length = 516 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 3/67 (4%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 D R + +Y+ + L+ N A E F Q P + + ++ +G Sbjct: 361 ADPRRVQPLYQIGLASLRLGNVDDAREAFEQVVARSPTHVL---AQFNLGMARFRSGDVG 417 Query: 112 QAASLGE 118 A + Sbjct: 418 AALRNFQ 424 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 37/120 (30%), Gaps = 29/120 (24%) Query: 96 SLLMS-AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 + L A + G+Y++A I Y +G++ ++ Sbjct: 333 ADLELVARTSFRVGEYEKAIDYYRRLID---ADPRRVQPLYQIGLASLRL--------GN 381 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 + ++V R LA + + R+ + G+ AA+ FQ Sbjct: 382 VDDAREAFEQVVARSPTH---------------VLAQFNLGMARF--RSGDVGAALRNFQ 424 >gi|194435786|ref|ZP_03067889.1| cellulose synthase operon protein C [Escherichia coli 101-1] gi|253771639|ref|YP_003034470.1| cellulose synthase subunit BcsC [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163452|ref|YP_003046560.1| cellulose synthase subunit BcsC [Escherichia coli B str. REL606] gi|300927975|ref|ZP_07143532.1| tetratricopeptide repeat protein [Escherichia coli MS 187-1] gi|194425329|gb|EDX41313.1| cellulose synthase operon protein C [Escherichia coli 101-1] gi|242379048|emb|CAQ33848.1| oxidase involved in cellulose synthesis [Escherichia coli BL21(DE3)] gi|253322683|gb|ACT27285.1| cellulose synthase operon C domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975353|gb|ACT41024.1| cellulose synthase subunit [Escherichia coli B str. REL606] gi|253979509|gb|ACT45179.1| cellulose synthase subunit [Escherichia coli BL21(DE3)] gi|300463982|gb|EFK27475.1| tetratricopeptide repeat protein [Escherichia coli MS 187-1] gi|323959461|gb|EGB55118.1| cellulose synthase operon protein C [Escherichia coli H489] gi|323971388|gb|EGB66627.1| cellulose synthase operon protein C [Escherichia coli TA007] Length = 1157 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + +V R S V + G+ A ++ + Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREP---ANADAILGLTEVDIAAGDKAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|330502031|ref|YP_004378900.1| TPR repeat-containing protein [Pseudomonas mendocina NK-01] gi|328916317|gb|AEB57148.1| TPR repeat-containing protein [Pseudomonas mendocina NK-01] Length = 569 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 95/278 (34%), Gaps = 82/278 (29%) Query: 41 QSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 ++ + V + ++ + A++ L+ + + +A Y + +S + Sbjct: 265 DDAKGEFSKLVQENPNDDDLRFSLALVCLEAEAWEEAIVYLEELVER--------RSHVD 316 Query: 100 SAFVQYSAGKYQQAA----SLGEEYITQYPESKNV------------------------- 130 + Y+ G+ +A S +EY P + + Sbjct: 317 A--AHYNLGRAYEALNDNDSALQEYAQVGPSNDYLPAQQRQAELLFAQQRGEEASARLAQ 374 Query: 131 ------DYV--YYLV---GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 DY YL+ G+S + + + + ++ +E+Y N + R Sbjct: 375 ARDAQPDYAIQLYLIEAEGLSNSGQV----------EPAWKAINDGLEQYPNDLNLLYTR 424 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRG-EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY- 237 + R+ LA E ++ RY ++R E+ A+ LA+ EEA + +A+ Sbjct: 425 AMLAEKRDDLAQLETDL-RYIIEREPEHAMALNALGYTLAD--RTTRYEEARDLIAKAHQ 481 Query: 238 ----------------VALALMDEAREVVSLIQERYPQ 259 L +DEA ++ E++P Sbjct: 482 LNPDDPAILDSLGWVNYRLGNLDEAERLLRQALEKFPD 519 >gi|316977960|gb|EFV60996.1| serine/threonine-protein phosphatase 5 [Trichinella spiralis] Length = 490 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 44/146 (30%), Gaps = 26/146 (17%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 V ++ + + ++A K + + +A E + + + + L + Sbjct: 13 VENIAEAKRLRQEANECFKNEQYERAIELYTDALK----YTPADPQLLGNRSLANLRIEL 68 Query: 110 YQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 Y A + I + YV YY + + KL L +V+ Sbjct: 69 YGSALADATSAIEI-----DRGYVKGYYRRAQANMAL--------GKFKLALMDYEAVVK 115 Query: 168 RYTNSPYVKGARFYVTVGR---NQLA 190 A+ + R QLA Sbjct: 116 VRPQDK---DAKNKLVECRRIVKQLA 138 >gi|313157909|gb|EFR57315.1| tetratricopeptide repeat protein [Alistipes sp. HGB5] Length = 657 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 17/139 (12%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + +A+L + ++++A E +++ + ++ A V G+ ++ Sbjct: 255 DSTNSLTYFNRAMLRTQIGDYNRALEDYDKVAL---YSPNNVLVYYNRAGVYAQLGEIEK 311 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL----MLQYMSRIVER 168 AA I YP+ N Y+Y G +R++ D + K + ++ R Sbjct: 312 AAEDYTSAIKLYPDFANA-YIY--RG-----RLRELLRDPQGAKKDRDTAQKKIAEYRSR 363 Query: 169 YTNSPYV--KGARFYVTVG 185 ++S Y Sbjct: 364 LSDSTYSIFADTTQRFDRL 382 >gi|50546166|ref|XP_500610.1| YALI0B07579p [Yarrowia lipolytica] gi|49646476|emb|CAG82843.1| YALI0B07579p [Yarrowia lipolytica] Length = 885 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 45/138 (32%), Gaps = 22/138 (15%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108 D + Y ++ +Q ++KAYE + + P + Y Sbjct: 257 ADPLEAQSWYLLGRCYMAQQKYNKAYEAYQRAVYRDGRNP-TFWC-----SIGVLYYQIN 310 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y+ A I P + V+Y +G + + + D + + E Sbjct: 311 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQVND------AIDAYQKAAEL 360 Query: 169 YTNSPYVKGARFYVTVGR 186 ++P+++ + R Sbjct: 361 DPHNPHIQE---RLLQLR 375 >gi|152977377|ref|YP_001376894.1| TPR repeat-containing protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026129|gb|ABS23899.1| Tetratricopeptide TPR_2 repeat protein [Bacillus cytotoxicus NVH 391-98] Length = 503 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 78/222 (35%), Gaps = 49/222 (22%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 E+A +++ +A ++D+P ++G A + +G QA L E Sbjct: 155 EEANRYIRNGQLEEAIATLEIVTKDYPEFWSGYN-----NLAIAHFQSGNVDQALKLTEM 209 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS------- 172 + + P + + + + + + + + + M + Y S Sbjct: 210 ILEKNPGN--------MHALCNTLIFLYSIGEHKQVEALAEQMKSV---YPISFEHRLKL 258 Query: 173 -------PYVKGARFYVTVGRNQLAAKEVEIGRYYL------KRGEYVAAIPRFQLVLAN 219 Y A ++ + + Q + ++ YY +Y A +Q V+ Sbjct: 259 GTTFATIGYFAHAYKWLKLLKRQ--GYDGDVSFYYWFAYASYMVKDYHTAEKMWQSVVEL 316 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVV-SLIQERYPQG 260 + D + E + AL L DE ++V+ +++ + + Sbjct: 317 HPDKKG--------KEPWNALNLADEGQKVLFEELRKTFQES 350 >gi|284052144|ref|ZP_06382354.1| lytic transglycosylase, catalytic [Arthrospira platensis str. Paraca] Length = 564 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 37/110 (33%), Gaps = 12/110 (10%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY--SAGKYQQAASLGEEYITQYPESK 128 + A + + + A + L Q +AG+ A+ + + + P+S+ Sbjct: 179 GSTETASQSRQLLLSQYSDSEAA--AQLRWTLAQQGATAGRLDIASEWARQLVNKNPDSE 236 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 +++G Q +K + ++ RY S Y A Sbjct: 237 LAPQATFMLG--------RWARQQGNSKDATKAFEYLLARYPESYYAWRA 278 Score = 36.6 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 64/214 (29%), Gaps = 33/214 (15%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARKSLLMSAFVQYSAGK 109 + R +Y A ++ + + FP A + A + Sbjct: 90 KTPRNMYRHARGLWLGGKIPESRRAYQELIAAFPTQTDPGGEDAGLGRIRLA----RLVE 145 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 ++A L + + +P ++ +T+ Q ++ +Y Sbjct: 146 PREALPLLNQVVENFPNH--AAEAVLDRANVLDKL--------GSTETASQSRQLLLSQY 195 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 ++S R LA + GR A + ++ D+E A +A Sbjct: 196 SDSEAAAQ-------LRWTLAQQGATAGRL-------DIASEWARQLVNKNPDSELAPQA 241 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 L +A + + RYP+ Y+A Sbjct: 242 TFMLGRWARQQGNSKDATKAFEYLLARYPESYYA 275 >gi|285019105|ref|YP_003376816.1| tpr domain protein; von willebrand factor, type a [Xanthomonas albilineans GPE PC73] gi|283474323|emb|CBA16824.1| putative tpr domain protein; von willebrand factor, type a [Xanthomonas albilineans] Length = 607 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 28/78 (35%), Gaps = 15/78 (19%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR---DFPFAGVARKSLLMSAFVQYSAG 108 D Q+ + + V ++ +F+ A + F + G Sbjct: 357 PDQVRQQRL-DTGVQAYRKGDFAAAQQQFEGVDSDVGWY-----------NLGNALARQG 404 Query: 109 KYQQAASLGEEYITQYPE 126 +Y QA + ++ +T +P+ Sbjct: 405 RYDQAIAAYDKALTLHPQ 422 >gi|196228955|ref|ZP_03127821.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] gi|196227236|gb|EDY21740.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] Length = 440 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 65/208 (31%), Gaps = 49/208 (23%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + L + KA N R P A A + ++ K A + + + Sbjct: 76 RGRLRAGRGEYDKALPDLNAAIRLKPSAEAYAHR-----GYIYQKQHKLDDALADFNQAL 130 Query: 122 TQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 P+ Y +L G+ V D TK L + + +S V AR Sbjct: 131 RLEPQH----YLALFLRGL--------VLGDTGDTKAALDDLDAALAIQPDSKEVLQARG 178 Query: 181 YVTVGRNQL------------------AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 V V R +L A G YLK F+ + +Y+ Sbjct: 179 QVHVLRKELDDAQADFERCIQLDPKDPAGHTGRGGVNYLKGD--------FKEAVEDYTQ 230 Query: 223 A----EHAEEAMARLVEAYVALALMDEA 246 A + +A+ AY + +D+A Sbjct: 231 AVELLPKDPQPLAQRGYAYAGMNEVDKA 258 >gi|254411072|ref|ZP_05024850.1| hypothetical protein MC7420_550 [Microcoleus chthonoplastes PCC 7420] gi|196182427|gb|EDX77413.1| hypothetical protein MC7420_550 [Microcoleus chthonoplastes PCC 7420] Length = 173 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 9/74 (12%), Positives = 28/74 (37%), Gaps = 9/74 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y+ + ++ A ++ + + V ++ + +AG+ +A +LG Sbjct: 12 YQTGKATFERGDYRAAVKHLEKACTLINRN--SRVGGEAQMWLVTAYEAAGQQTEAIALG 69 Query: 118 EEYITQYPESKNVD 131 ++ ++D Sbjct: 70 QQLTK----HPDLD 79 >gi|156934928|ref|YP_001438844.1| hypothetical protein ESA_02777 [Cronobacter sakazakii ATCC BAA-894] gi|156533182|gb|ABU78008.1| hypothetical protein ESA_02777 [Cronobacter sakazakii ATCC BAA-894] Length = 730 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 59/190 (31%), Gaps = 45/190 (23%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCS-RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A + ++ A E F+ P+ VA+ + M V + +A+ ++ Sbjct: 209 YLGAASAFYQGDYPAATERFSALKASSQPW--VAQTAAYMLMRVALNQ----SSAAAVDD 262 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 DY + D+ A + L Y ++ + Y AR Sbjct: 263 -----------DYGLF----------DTTKIDKTAARQALAYSEAYLKAWPEGDYADSAR 301 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 R Y ++ A PR++ L DA+ A L+E Sbjct: 302 GMQR--------------RIYWYLQDWDALAPRYEQALKAAPDADALR---ALLLENDTK 344 Query: 240 LALMDEAREV 249 L D + + Sbjct: 345 LQSKDASGDT 354 >gi|115699987|ref|XP_792593.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115930468|ref|XP_001192487.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 2174 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 71/202 (35%), Gaps = 39/202 (19%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ-YPESK-- 128 N+SKA E + + P A + ++ + A KYQ A E+ + P + Sbjct: 1599 NYSKAIEVLSSTVKVSPTAPL----YILLGKTEIKAKKYQPAVQSLEKALDLMKPWQERQ 1654 Query: 129 ----NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE---RYTNSPYVK----- 176 VYYL+GM + + I +V + + ++ Y + Y + Sbjct: 1655 SWPLEAAEVYYLIGMCHME-IPNV-------YKAYEAFNSAIKINPEYPEAYYQRGLTRT 1706 Query: 177 ---GAR-----FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA-- 226 A+ +L + YY +RG Y I + ++ A Sbjct: 1707 RLHQAKGILDFNRALALNPKLFQAYLSRAAYYGQRGRYSKGIYNCNQAIRLQPNSVRAYL 1766 Query: 227 -EEAMARLVEAYVALALMDEAR 247 A+ + A+ ALA+ D + Sbjct: 1767 YRGALKYYISAH-ALAIKDLCQ 1787 >gi|13650078|gb|AAK37555.1|AF349572_1 SHOOT1 protein [Glycine max] Length = 359 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 33/110 (30%), Gaps = 16/110 (14%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + + K + +A E F P A + A + Q A S EE Sbjct: 247 EGLQLYKNGKYDEALEKFESILGSKPEPEEAAVASYNVACCYSKLNQIQAALSSLEE--A 304 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 ++ + IR P D + + +++R+ S Sbjct: 305 LNTGFED------------FKRIRTDP-DLANAR-ASEEFDPLLKRFDES 340 >gi|53804574|ref|YP_113792.1| hypothetical protein MCA1330 [Methylococcus capsulatus str. Bath] gi|53758335|gb|AAU92626.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath] Length = 473 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 56/187 (29%), Gaps = 46/187 (24%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQQAASLGEEYITQY 124 N ++ +YF + V + Y + GK Q + EE I +Y Sbjct: 276 NPQESVDYFTAI------SEVGTRQQQDV--AHYGLALALVAQGKIGQGRPMLEELIRRY 327 Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 PE + + + D + + ++R+ + + Sbjct: 328 PEQSH-----------FFNALADAEREAKTYPAAFAIYEEALKRFPGNR-----ALTLNY 371 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 + ++ G+ + A R Q L ++ E L +A+ L Sbjct: 372 AQTL------------VRAGKPLEARKRLQDYLLHFPATPEVYE---LLAQAHSQLGNEA 416 Query: 245 EAREVVS 251 E+ ++ Sbjct: 417 ESHRYLA 423 >gi|301058339|ref|ZP_07199372.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] gi|300447575|gb|EFK11307.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] Length = 262 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 28/100 (28%), Gaps = 10/100 (10%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 Y+ L I + + D + E++ +A +E N+ +A Sbjct: 3 YRLLLPISLFLIAFMMAPSAFGQDS-------RDGKAWEELFFQANQHYREGNYQEAIAG 55 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +NQ R + + + A E Sbjct: 56 YNQLLR---MGHDSSLIQYNLGNAWFRLNQVGHAILAYER 92 >gi|301059208|ref|ZP_07200146.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] gi|300446698|gb|EFK10525.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] Length = 650 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 19/159 (11%), Positives = 56/159 (35%), Gaps = 24/159 (15%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 L K A+++ + FL + +S+R + + + + A + ++ +++ + Sbjct: 7 LLKRAISVLLAGMALFLFACQPRSTRSF----TEATQTRSDAFSVAEKYRQKGELAQSLK 62 Query: 79 YF-----NQCSR-DFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 Y+ P +A + + + + A + EE +YP+ + Sbjct: 63 YYRSFLTQAVEDDRIP---LALQRVAEIEL-----KLNNPENALASLEELSRRYPDYAWM 114 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 V Y + Q+ + + + ++ + + Sbjct: 115 PEVRYQISAILYQL----GRYEASAHKAILWLDQYQRHF 149 >gi|269961755|ref|ZP_06176115.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833538|gb|EEZ87637.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 391 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 23/191 (12%), Positives = 51/191 (26%), Gaps = 44/191 (23%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY--- 120 A ++ +A + F Q + P + L++ + ++++A + Sbjct: 114 AKDYMASGFLDRAEKIFEQLVEE-PDHRESALQQLVTIY--QQTREWEKAIHYANQLAKM 170 Query: 121 ------ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 I + + + T +Q+ + + Sbjct: 171 GKKRTRIRANIAH-------------FWCELAMLDQADGNTSKAIQHFKKALSEDPKCVR 217 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 A + YL+ +Y I VL D + + + + Sbjct: 218 ASIALGRI-----------------YLESEDYKHTIKYLTGVLE--QDKDFISDVLPTIA 258 Query: 235 EAYVALALMDE 245 E Y L DE Sbjct: 259 ECYHHLGQEDE 269 >gi|257463168|ref|ZP_05627568.1| hypothetical protein FuD12_04891 [Fusobacterium sp. D12] gi|317060760|ref|ZP_07925245.1| predicted protein [Fusobacterium sp. D12] gi|313686436|gb|EFS23271.1| predicted protein [Fusobacterium sp. D12] Length = 604 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQA 113 +Y KA +E+ + +AYE F+ R FP++ V + LL QY ++++A Sbjct: 29 LYTKAKKQYQERKYQEAYENFSLLKRTFPYSRVQKSKLLDYYLGLTQYHLEQWEEA 84 >gi|224534365|ref|ZP_03674943.1| TPR domain protein [Borrelia spielmanii A14S] gi|224514467|gb|EEF84783.1| TPR domain protein [Borrelia spielmanii A14S] Length = 379 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 68/212 (32%), Gaps = 36/212 (16%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 K+ N+ KA Y+ +C P +L S Y++A + EEY+ PE+ Sbjct: 70 KKNNYDKAIVYYQRCLVKHPNNNY---ALFGLGDCYRSLDDYKKATDIWEEYLKFDPEN- 125 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180 ++ + + + Q +++E + Y + Sbjct: 126 ----------ITVLTRVASSYRKLKNFQKSKQTYLKVMELMPENDYALVGIGHLYYDFKE 175 Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 Y + L E+ IG Y K E+ I F+ L + A Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGIYFFKKALEI---SPSNFYA 232 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + L + Y EA + I E+ P+ Sbjct: 233 VFGLADCYRGNKDYKEALKYWLDIIEKDPKNN 264 >gi|253701165|ref|YP_003022354.1| hypothetical protein GM21_2555 [Geobacter sp. M21] gi|251776015|gb|ACT18596.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21] Length = 250 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 17/161 (10%), Positives = 47/161 (29%), Gaps = 46/161 (28%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSR--DFPF---------------AGVARKSL------- 97 V +L+ + + A E F + +++L Sbjct: 102 NLGVNYLEMKRWDDAIEQFKLVQDDIFYQGQDGAAINLGLAYLGKGEY-QQALSVLRNAV 160 Query: 98 ----------LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 L V ++ K + A ++ + ++ YY +G++ ++ Sbjct: 161 GKNSSDPRIRLNLGRVYFALEKNELAIEEYQKALQL---NRFYASAYYHLGLAQMKL--- 214 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + +V +S + +R Y+ + + + Sbjct: 215 -----KDADAAKSAFQDVVRLAPDSEIGQLSREYLELLKVR 250 >gi|149200006|ref|ZP_01877032.1| hypothetical protein LNTAR_03474 [Lentisphaera araneosa HTCC2155] gi|149136879|gb|EDM25306.1| hypothetical protein LNTAR_03474 [Lentisphaera araneosa HTCC2155] Length = 761 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 18/146 (12%), Positives = 51/146 (34%), Gaps = 9/146 (6%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 LTI + +A+ +++ + + Y + + + + +A F + Sbjct: 242 LTIQYVLALIRSKKYDQARGALASIKNPNAEEEAWANYALGICYYQLGLYKQALISFEKS 301 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 + F + K+L + +A L + + +++P S L + + Sbjct: 302 LLNQNFTE-SPKALAYLIYCHLQVKDMPKALELSKVFDSKHPTSS-------LRAEIHYK 353 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERY 169 + +Q + L ++ + + Y Sbjct: 354 NSL-LALEQNNSTLAVKELQTAINVY 378 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 88/263 (33%), Gaps = 28/263 (10%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYE 78 + + A + E + ++Y + +E +YE L L++ ++A Sbjct: 89 NLRIVVQLKKAALLITKKEFDKAEELYKKITSAETNYQEHALYEYGRLLLEQGKNNEAVT 148 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYS-------AGKYQQAASLGEEYITQYPESKNVD 131 F S G A + + Y+ Y A + Sbjct: 149 TFLDLSSK----GKAEDKEVR-IYAHYALSSLYLGQENYSSAEKHLNTLTNITKDHSLKT 203 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLM-----LQYMSRIVERYT----NSPYVKGARFYV 182 + L+ A RD L + ++++ +Y S AR + Sbjct: 204 QAFILLIQLLATQERDAELITTHKTLATLNPHKENLNQLTIQYVLALIRSKKYDQARGAL 263 Query: 183 TVGRNQLAAKE----VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 +N A +E +G Y + G Y A+ F+ L N + + +A+A L+ ++ Sbjct: 264 ASIKNPNAEEEAWANYALGICYYQLGLYKQALISFEKSLLN-QNFTESPKALAYLIYCHL 322 Query: 239 ALALMDEAREVVSLIQERYPQGY 261 + M +A E+ + ++P Sbjct: 323 QVKDMPKALELSKVFDSKHPTSS 345 >gi|146092796|ref|XP_001466521.1| hypothetical protein [Leishmania infantum] gi|134070884|emb|CAM69560.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 693 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 6/70 (8%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 ++++ + +A E +FP + A LM A+ Y G Y +AASL E+ P Sbjct: 61 YIRDHQYEEAVELLATQLEEFPRSRAA--VSLM-AYCYYMMGDYGEAASLYEQLTKICPN 117 Query: 127 SKNVDY-VYY 135 + Y VYY Sbjct: 118 IEE--YRVYY 125 >gi|107100090|ref|ZP_01364008.1| hypothetical protein PaerPA_01001111 [Pseudomonas aeruginosa PACS2] Length = 268 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 4/55 (7%) Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 Y +G+ Y DQR Y R+V + + + A+ + R + Sbjct: 94 LYQIGLIYMSRYN----DQRDDAKATDYFQRVVREFPGTHAAEHAQARLLAMRQR 144 >gi|56751313|ref|YP_172014.1| hypothetical protein syc1304_c [Synechococcus elongatus PCC 6301] gi|56686272|dbj|BAD79494.1| hypothetical protein [Synechococcus elongatus PCC 6301] Length = 923 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 14/117 (11%), Positives = 36/117 (30%), Gaps = 14/117 (11%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + Y++A+ + F A ++ D P A +L + Y + + Sbjct: 4 TAAAQHDYQQAIAAYQAGEFEAAIAQLDRLLGDVP--DWAA-ALGLQGLCYYCCDQRETG 60 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +L I P ++ + ++ Q L+ +++ + Sbjct: 61 ITLLRRAIALDPTDP-----------THFNNLGNLLQRQGHLTEALERLTQALAIDP 106 >gi|332661980|ref|YP_004451449.1| sulfatase-modifying factor protein [Haliscomenobacter hydrossis DSM 1100] gi|332337477|gb|AEE54576.1| Sulphatase-modifying factor protein [Haliscomenobacter hydrossis DSM 1100] Length = 655 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 18/115 (15%) Query: 85 RDFPFAGVARKSLLMSAFVQY--SAGKYQQ-----AAS-----LGEEYITQYPESKNVDY 132 +P + Y A +Y+Q A + ++ +YP SK D Sbjct: 277 TKYPNGKYVVIAK-GLISAYYFGDAAEYEQMAWERALATNTIKAYTDFHDKYPRSKYSD- 334 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 + + ++ + + TK + R ++ SPY+K A+ V R Sbjct: 335 ----LALDALDILEEKEEWDKVTKTRQAPLLRYIQLNPQSPYLKEAQRLVDALRE 385 >gi|258624849|ref|ZP_05719777.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258582847|gb|EEW07668.1| conserved hypothetical protein [Vibrio mimicus VM603] Length = 610 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 39/123 (31%), Gaps = 7/123 (5%) Query: 14 AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73 A + + AL + L +S + D ++ + Y +A + + Sbjct: 312 AALFMFRRGALFTVALLIGTSLPNQHAWASPWLNQDQQAMRDFESKQYSQAAEGFSDPRW 371 Query: 74 SKAYEYFNQCSRDFPFAGVAR------KSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 A Y N ++ + A AG +A SL E+ + + P Sbjct: 372 QGAARY-NAGDYQGAIDAYSQVDNPDLDTQYNLANAYAQAGDLSKARSLYEQVLEKEPNH 430 Query: 128 KNV 130 ++ Sbjct: 431 QDA 433 >gi|220917391|ref|YP_002492695.1| hypothetical protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219955245|gb|ACL65629.1| tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 243 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 6/27 (22%), Positives = 10/27 (37%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYIT 122 + L Y G + A + E Y+ Sbjct: 122 AELARGDAHYKLGDWDAALASYERYLK 148 >gi|146100529|ref|XP_001468885.1| hypothetical protein [Leishmania infantum] gi|134073254|emb|CAM71977.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 622 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 12/80 (15%) Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAE-----HAEEAMARLVEAYVALALMDEAREV 249 IGR ++ EY AA F A Y E E++ L Y L +DEA + Sbjct: 53 NIGRVFIDMKEYGAAENAFTEAAAIYEQVEGDKSLEYAESLELLAFCYTHLKFLDEAEKA 112 Query: 250 ----VSLIQ---ERYPQGYW 262 + + + Y W Sbjct: 113 FKDSIRIFRDQCYNYGNNSW 132 >gi|126321340|ref|XP_001379379.1| PREDICTED: similar to aspartate beta-hydroxylase [Monodelphis domestica] Length = 730 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 21/110 (19%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK----EVEIGRYYLKRGEYVAAIP 211 + + +V +Y SP + + + LA K EV LKR AI Sbjct: 330 EDAMNAFEELVRKYPQSPRARYGKA---QCEDDLAEKRRSNEV------LKR-----AIE 375 Query: 212 RFQLVLANYSDAEH--AEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +Q V A+ + + ++ R E L M + + + +P Sbjct: 376 TYQEV-ADLPNVPADLVKLSLKRQSERQQFLGHMRGSLVTLQKLVHLFPN 424 >gi|145495950|ref|XP_001433967.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124401088|emb|CAK66570.1| unnamed protein product [Paramecium tetraurelia] Length = 463 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 42/146 (28%), Gaps = 39/146 (26%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA---------------------- 90 D ++ Y A L+L ++ F A YF++ P+ Sbjct: 316 DPKFADAYYLIANLYLDQKKFEDAIIYFDKTIDLDPYHAEAFNNKGVALKQLKKYEEAFI 375 Query: 91 --GVARKSLLMSAFVQY-------SAGKYQQAASLGEEYITQYPE--SKNVDYVYYLVGM 139 A +S + F Y Y A + P S Y +G+ Sbjct: 376 CFEKAIQSDPNNPFGHYNKGCSLIKTKNYVDAIICLNNALNLNPTCSSP-----QYEIGL 430 Query: 140 SYAQMI-RDVPYDQRATKLMLQYMSR 164 S+ +I R V + K + Sbjct: 431 SFYYLINRSVFKSPKLDKKDYHQLQD 456 >gi|124024101|ref|YP_001018408.1| hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT 9303] gi|123964387|gb|ABM79143.1| Hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT 9303] Length = 725 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 31/139 (22%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 GK ++A + P G A + D D Q + V+ Sbjct: 122 GKTEEAKQAYRNALQLNPAHAGAA------GNLGALLTDDGELD-----EAEQLFVKAVD 170 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 +Y N+ + GR LA K E+ AAI ++Q+ L A + Sbjct: 171 QYPNN-----VNLRINYGR-LLAEKA-----------EHAAAIMQYQIAL---PLAPQSP 210 Query: 228 EAMARLVEAYVALALMDEA 246 E A ++EA Sbjct: 211 ELHYNFANALKEEGDVEEA 229 >gi|94971627|ref|YP_593675.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94553677|gb|ABF43601.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 398 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 78/251 (31%), Gaps = 34/251 (13%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 AVC L ++D ++D ++ A + NF A + + Sbjct: 3 LIGAVCLLSLCASVFAQD-----LSDKAEYDKLKAHATELFNQNNFLAALPELQKLADQN 57 Query: 88 P---------FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 P +A K+LL + A E S+ ++Y Sbjct: 58 PKDYAVLEALGFALASKALLET-DADQRKADRIAARKHLLEAKKLGDNSEMINY------ 110 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE----- 193 + P K + + M + + A+ + L E Sbjct: 111 LLETTPEDGTPRKFSDNKEIERLMQTAEAHFAKGE-LNEAKA--GYLQVLLLDPENYAAA 167 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE--VVS 251 + G Y K G+Y ++I FQ + ++ E A +A L DEAR + + Sbjct: 168 LFTGDVYFKDGKYCSSIQWFQKAIEIDANTETAYR---YWGDALDHLGQKDEARRKFMEA 224 Query: 252 LIQERYPQGYW 262 +I + Y W Sbjct: 225 VIADPYNNRPW 235 >gi|21110817|gb|AAM39201.1| polysaccharide deacetylase [Xanthomonas axonopodis pv. citri str. 306] Length = 911 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 36/127 (28%), Gaps = 20/127 (15%) Query: 62 EKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 E+ + KE+ + A E F A + FV Y G++ ++A E Sbjct: 802 ERGLQLYKEKRYVDAAEQFAEALKLR---PDFA-LAANNLGFVYYRQGRFAESARWLENT 857 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGA 178 + P ++Y + D+ + + + A Sbjct: 858 LKIDPS----------RAVAYLNLGDAYAKAGDRDKARKAYSTYLELQ---PQGSGAEQA 904 Query: 179 RFYVTVG 185 R + Sbjct: 905 RTQLQSL 911 >gi|85709885|ref|ZP_01040950.1| putative Zn-dependent protease [Erythrobacter sp. NAP1] gi|85688595|gb|EAQ28599.1| putative Zn-dependent protease [Erythrobacter sp. NAP1] Length = 459 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 7/58 (12%), Positives = 22/58 (37%), Gaps = 3/58 (5%) Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + + +P + + + A+ + + ++A + + + P + Y L G Sbjct: 266 QRVMQRYPESDQSVPARYARAYAYHKDAQVEKAVAEADSLLGTEPNNP---YFLELKG 320 >gi|325663509|ref|ZP_08151919.1| hypothetical protein HMPREF0490_02660 [Lachnospiraceae bacterium 4_1_37FAA] gi|325470408|gb|EGC73639.1| hypothetical protein HMPREF0490_02660 [Lachnospiraceae bacterium 4_1_37FAA] Length = 181 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 65/167 (38%), Gaps = 26/167 (15%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E+ + +++ + +A E F + + ++ L V + KY++A + ++ Sbjct: 33 EEGMELFEQKKYDEALELFQK---EAESGEEQAEAYLGMGLVYWEQQKYEEARNAFQK-- 87 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 ++ +Y L+ Q+ + L + + ++ NS Sbjct: 88 ALNAGTEKTGTLYNLLASCEMQL--------GDYQSALNHYNLGLQSEGNS---AELTQE 136 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + NQ+AA E + Y ++ +A + + +A Y D E A++ Sbjct: 137 MEF--NQIAAYE----KLY----DWESAKAKIEEYIAKYPDDEAAKK 173 >gi|299755197|ref|XP_001828491.2| TPR-containing protein Mql1 [Coprinopsis cinerea okayama7#130] gi|298411113|gb|EAU93324.2| TPR-containing protein Mql1 [Coprinopsis cinerea okayama7#130] Length = 1127 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 62/169 (36%), Gaps = 39/169 (23%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS-------A 107 + ++ +++ ++ + ++ E F++ R+ P + +A A + + Sbjct: 109 KANEILFRLGIIYKQQGKYQESLECFDRILRN-PPSPLAH------ADIWFQIGHVFEQQ 161 Query: 108 GKYQQAASLGEEYITQYPESKNV----DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y +A E + P V ++Y+ G ++ L +QY++ Sbjct: 162 KDYHRAKDAYERVVMDNPSHAKVLQQLGWLYHQDGSAFQNQD-----------LAIQYLT 210 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 + +E A+ + +GR +A ++ Y Y A+ R Sbjct: 211 KSLEADP-----TDAQSWYLLGRAYMAGQKYNKA--Y---EAYQQAVYR 249 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 43/142 (30%), Gaps = 22/142 (15%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108 D + Y ++ Q ++KAYE + Q P + + Sbjct: 215 ADPTDAQSWYLLGRAYMAGQKYNKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYFQIN 268 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y+ A I P + V++ +G S + + D + +R E Sbjct: 269 QYRDALDAYSRAIRINP---YISEVWFDLG-SLYESCNNQITD------AIDAYARASEL 318 Query: 169 YTNSPYVKGARFYVTVGRNQLA 190 +P + + R A Sbjct: 319 DPTNP---AITQRLQLLRQAQA 337 >gi|262196490|ref|YP_003267699.1| hypothetical protein Hoch_3304 [Haliangium ochraceum DSM 14365] gi|262079837|gb|ACY15806.1| Tetratricopeptide repeat protein [Haliangium ochraceum DSM 14365] Length = 433 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + AA R++ +L + D+ +A+ L +Y L D+ +++ ++ Sbjct: 114 ERFDAAAARYEQLLRMFPDSRLVPDALYNLGLSYE---LRDQPERALAMYRQ 162 >gi|168699317|ref|ZP_02731594.1| hypothetical protein GobsU_07347 [Gemmata obscuriglobus UQM 2246] Length = 415 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 44/146 (30%), Gaps = 30/146 (20%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQ 111 ++Y + L ++ +A E +++ R P FAG ++ G Sbjct: 7 TDDATDLYTRGHNALTAGDYQEAVECYSRAIRLRPGDFAGYRFRA-----HAYIELGDRV 61 Query: 112 QAASLGEEYITQYPESK--NVDYVYYLVGMSYAQM-IRDVPY------------------ 150 +A + ++ I P+ D L I D Sbjct: 62 RALNDLDQAIRLKPDDAQTYADRAEELFAQVQYDQAITDCDRALKLDPKRVALVALRGRC 121 Query: 151 --DQRATKLMLQYMSRIVERYTNSPY 174 D+ ++ + + ++ N+ Y Sbjct: 122 HADRGDSEAAFRDFAAAIDADPNNAY 147 >gi|156846776|ref|XP_001646274.1| hypothetical protein Kpol_1032p8 [Vanderwaltozyma polyspora DSM 70294] gi|156116949|gb|EDO18416.1| hypothetical protein Kpol_1032p8 [Vanderwaltozyma polyspora DSM 70294] Length = 343 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 10/144 (6%), Positives = 39/144 (27%), Gaps = 20/144 (13%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTD--VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 ++ L +V + +++ + + + + +N+ A + +++ Sbjct: 67 ITLKGLGLQNVSDVVELEVKNEEISEDKKKEAEALKLEGNKQMSLKNYKSAIDKYSKAIE 126 Query: 86 DFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 +P + ++ + A I P Y Sbjct: 127 IYPSNPFYYSNRAA-----AYQMIEDFTNAVLDANTAIKLDPT--------YSKA---YS 170 Query: 144 MIRDVPYDQRATKLMLQYMSRIVE 167 + + + + +++E Sbjct: 171 RLGAAKLAEGNNEDAVHAFKKVLE 194 >gi|189500993|ref|YP_001960463.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides BS1] gi|189496434|gb|ACE04982.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides BS1] Length = 214 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 53/163 (32%), Gaps = 30/163 (18%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 ++ + Y +A E ++ P+S G++ + ++++ Sbjct: 67 PQAYIRLGNEYAKQQLYDKAVEAYENALSLNPQS----------GITVYPALGAAYFNRQ 116 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 L Y + + Y +IG YL + AI + Sbjct: 117 QYTEALGYFKKSL------EYSPEDSLRF-----------YDIGNVYLHLQKCDLAIEAY 159 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 + N + +EA L Y+ +A+++ + +QE+ Sbjct: 160 LQAIEN---STAFQEAHYNLAICYIRTGQKAKAQDIYAWLQEK 199 >gi|253699349|ref|YP_003020538.1| peptidoglycan-binding LysM [Geobacter sp. M21] gi|251774199|gb|ACT16780.1| Peptidoglycan-binding LysM [Geobacter sp. M21] Length = 204 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 23/53 (43%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + E + +A ++N+ +A E F+ + FP +G A + L A Sbjct: 146 PAQAGEAESFHRARKAYLDRNYQRALELFSSFLKKFPRSGYAADASLYRADCY 198 Score = 35.5 bits (81), Expect = 8.9, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 15/39 (38%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 R + L+ S ++++ S Y A Y L+ Sbjct: 165 RNYQRALELFSSFLKKFPRSGYAADASLYRADCYLHLSG 203 >gi|118594321|ref|ZP_01551668.1| TPR repeat [Methylophilales bacterium HTCC2181] gi|118440099|gb|EAV46726.1| TPR repeat [Methylophilales bacterium HTCC2181] Length = 611 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 30/231 (12%), Positives = 74/231 (32%), Gaps = 46/231 (19%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQC-----SRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 ++ F++ + ++A Y + + +L+ ++ Sbjct: 37 ETLFLIGTCFIQLNDTTQAILYLKKALNQRKNDRH--------TLMNLGAAYRKMKDFKS 88 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A +E + P + V +G +Y DQ ++ S+ + ++ Sbjct: 89 ATQYLKECLKTNPRDPD---VLNNLGATYE--------DQGLHSQSIKAFSQALSHDPSN 137 Query: 173 PYVKGARFYVTVGRNQL-------------------AAKEVEIGRYYLKRGEYVAAIPRF 213 K R + +L A E+ +K+ + AI Sbjct: 138 ETFKINRARALIAYRKLTKALSDLKQISVQSPHYFQAQYEIF--NVLIKQNNFSEAIKLG 195 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 + ++AN +H +L+E + L+ +D+A + + P + + Sbjct: 196 ESLIANSGQLDHI-RINKKLIECSMMLSQIDKANLYLKKLSLNDPDYKFYQ 245 >gi|312972198|ref|ZP_07786372.1| cellulose synthase operon protein C [Escherichia coli 1827-70] gi|310334575|gb|EFQ00780.1| cellulose synthase operon protein C [Escherichia coli 1827-70] gi|323934688|gb|EGB31078.1| cellulose synthase operon protein C [Escherichia coli E1520] Length = 1140 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 426 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 482 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 483 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 539 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + +V R S V + G+ A ++ + Sbjct: 540 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 593 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 594 DWAQQRRDYTAARAAYQNVLTREP---ANADAILGLTEVDIAAGDKAAARSQLAKL 646 Score = 35.9 bits (82), Expect = 6.8, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 339 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 395 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 396 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 441 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 442 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 490 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 491 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 520 >gi|301168118|emb|CBW27704.1| hypothetical protein BMS_2934 [Bacteriovorax marinus SJ] Length = 900 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 27/91 (29%), Gaps = 7/91 (7%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L A + Y +AA + +++I Y + + ++ Sbjct: 437 LYNVAEAYFRNSNYSKAAKVYDDFIKDYSFHSKSSEARIRIAQCWEIQEKNFD------- 489 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 ++ + R NS AR RN Sbjct: 490 ETIELYKNAINRSQNSEIGFEARIRYVALRN 520 >gi|299141251|ref|ZP_07034388.1| TPR domain-containing protein [Prevotella oris C735] gi|298577211|gb|EFI49080.1| TPR domain-containing protein [Prevotella oris C735] Length = 1007 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 40/115 (34%), Gaps = 19/115 (16%) Query: 89 FAGVARKSLLMSAFVQYSAGKYQQ----AASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 F SL +++ ++ G+Y + A + + P N D ++ +S Sbjct: 662 FGKHIEDSLYAASYTAFNEGRYNEVLGNAHVSAKRF----PNGANRDKFLFIAALSKLND 717 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 K LQ ++ +V Y S A + + A K++ ++ Sbjct: 718 --------GDAKACLQDLNTLVSTYPESQLSVMAGMIINGVK---AGKQLRGAKF 761 >gi|260846319|ref|YP_003224097.1| cellulose synthase subunit [Escherichia coli O103:H2 str. 12009] gi|257761466|dbj|BAI32963.1| cellulose synthase subunit [Escherichia coli O103:H2 str. 12009] Length = 1140 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 426 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 482 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 483 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 539 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + +V R S V + G+ A ++ + Sbjct: 540 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 593 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 594 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 646 Score = 35.9 bits (82), Expect = 6.8, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 339 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 395 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 396 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 441 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 442 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 490 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 491 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 520 >gi|224085786|ref|XP_002307696.1| predicted protein [Populus trichocarpa] gi|222857145|gb|EEE94692.1| predicted protein [Populus trichocarpa] Length = 797 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 21/158 (13%), Positives = 51/158 (32%), Gaps = 17/158 (10%) Query: 14 AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73 W Y L + + + ++ +V + R+ + T R + + + Sbjct: 300 QWGYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCPTHFRALKLL---GSALFGVGEY 356 Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A + F A + A ++ G+ ++A + ++ I P + Sbjct: 357 KAAVKALE--EAIFMKPDYA-DAHCDLASALHAMGEDEKAIEVFQKAIDLKPGHVD---A 410 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 Y +G Y D + + +R++ + N Sbjct: 411 LYNLGGLYM--------DLGRFQRASEMYTRVLAVWPN 440 >gi|148262768|ref|YP_001229474.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4] gi|146396268|gb|ABQ24901.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens Rf4] Length = 632 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 68/202 (33%), Gaps = 19/202 (9%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + F+K + + KA + +D P +L Q +AG +A + E I Sbjct: 276 QGDEFVKNKEYEKAATEYKAALKDKP--EWPE-ALQKLGDAQMAAGHDDEAIASYREAIR 332 Query: 123 QYPESKNVDY---VYYLV------GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 E+ N+ Y + Y + + + D T+ L + + + Sbjct: 333 LKAENGNLHYNLGILYERKALLDEAVVEYRQALNYTADNGDTRRRLADIYTLRGSFPQ-- 390 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 + R ++ + Y+ +Y AAI + D A +A L Sbjct: 391 -AIEQYRELIKLRKDNPLIHFKLAKVYVNSKDYPAAISEYLETTKLDPDNIEAHRDLAAL 449 Query: 234 VEAYVALALMDEA-REVVSLIQ 254 + +EA +E S+++ Sbjct: 450 ---FRKKNQNEEAEKEYRSILR 468 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 69/197 (35%), Gaps = 14/197 (7%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE--- 126 +F +A E + + + A V ++ Y A S E P+ Sbjct: 385 RGSFPQAIEQYRELIKL---RKDNPLIHFKLAKVYVNSKDYPAAISEYLETTKLDPDNIE 441 Query: 127 -SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 +++ + + ++ R K ++ + + Y + + G Sbjct: 442 AHRDLA-ALFRKKNQNEEAEKEYRSILRMKKDDVEARTALTSIYVKNKNYDELINLLKEG 500 Query: 186 RNQLAA---KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 ++G Y + +Y AAI +++ +A SD +A+ + AY+ Sbjct: 501 VELNPKDPNSHYKLGLIYEFKKDYDAAISQYKESVALKSD---HAKALNAMGRAYMKSGR 557 Query: 243 MDEAREVVSLIQERYPQ 259 + EA+E + ++ P+ Sbjct: 558 ISEAKEALETAKKADPE 574 >gi|220927469|ref|YP_002504378.1| hypothetical protein Ccel_0010 [Clostridium cellulolyticum H10] gi|219997797|gb|ACL74398.1| TPR repeat-containing protein [Clostridium cellulolyticum H10] Length = 253 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 38/140 (27%), Gaps = 26/140 (18%) Query: 63 KAVLFLKEQNFSKAYEYFN---QCSRDFP-------------FAGVARKSLLMSAFVQYS 106 A+ + +++ A + P + + KS + Y Sbjct: 122 AAMEYYNNKDYVNAAVTLKYDVKIEYLSPKVINTYNDLVEKSYGKASLKSYRD-GYRDYK 180 Query: 107 AGKYQQAASLGEEYITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A I +++ +D YY + SY + K ++ Sbjct: 181 NKNYAGAIINLNRAIDFSKKNEYYIDDAYYYLANSYYKSSNFTD-----AKRIINAFQT- 234 Query: 166 VERYTNSPYVKGARFYVTVG 185 Y S + + R + Sbjct: 235 --DYPKSEFARSMRNLLEKI 252 >gi|75909502|ref|YP_323798.1| hypothetical protein Ava_3295 [Anabaena variabilis ATCC 29413] gi|75703227|gb|ABA22903.1| TPR repeat protein [Anabaena variabilis ATCC 29413] Length = 311 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 45/154 (29%), Gaps = 20/154 (12%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE------VYEKAVLFLKEQNFSKAYEYFN 81 F++A L G + + + + E Y ++ ++QN+ A F Sbjct: 112 FALAFANLGGSLLEGNNLQQANDYLQRALELEPRLGFAHYNLGLVRQQQQNWEGAIASFQ 171 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + + A + GK +A + + I P +Y +G+ Sbjct: 172 KAVEL---SKNAPEPHYYLGLCYLQLGKLDEAKNAFNQAIKINPRYSE---AHYNLGVIL 225 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 Q ++ L E N P Sbjct: 226 FN--------QGNSQEALIAFRNSAEANPNYPNA 251 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 31/241 (12%), Positives = 63/241 (26%), Gaps = 43/241 (17%) Query: 13 EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72 Y+ AL + C + L + + + + + ++ Sbjct: 2 RLPFYKYRIVALLSLILLGECLTPANATIPAIPKLLAQYS-LPTAPTLLNQGLQAIQAGR 60 Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG----KYQQAASLGEEYITQYPESK 128 A F + P A Y+ G + Q + + Sbjct: 61 IQDAIAAFQSAIQLDP----------NLAAAHYNLGLALRQTGQLQPAADAFYRATQSDP 110 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 N + + + Y+ R +E R Sbjct: 111 NFALA--------FANLGGSLLEGNNLQQANDYLQRALELEP---------------RLG 147 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 A + + R ++ + AI FQ + +++A E L Y+ L +DEA+ Sbjct: 148 FAHYNLGLVR--QQQQNWEGAIASFQKAVEL---SKNAPEPHYYLGLCYLQLGKLDEAKN 202 Query: 249 V 249 Sbjct: 203 A 203 >gi|116749962|ref|YP_846649.1| TPR repeat-containing serine/threonin protein kinase [Syntrophobacter fumaroxidans MPOB] gi|116699026|gb|ABK18214.1| serine/threonine protein kinase with TPR repeats [Syntrophobacter fumaroxidans MPOB] Length = 747 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 27/88 (30%), Gaps = 9/88 (10%) Query: 47 YLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAF 102 Y D+V E Y + L + +++ A + P +A AF Sbjct: 537 YRDAVRVNGNAPEAYSEMGALQQAQGDYASAIRSYEAGLALRPSHPDELLA-----NVAF 591 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNV 130 QA E+ + P ++ Sbjct: 592 CHDKLNNPDQARRYYEQALEINPNNRAA 619 >gi|320109033|ref|YP_004184623.1| tetratricopeptide repeat-containing protein [Terriglobus saanensis SP1PR4] gi|319927554|gb|ADV84629.1| Tetratricopeptide TPR_1 repeat-containing protein [Terriglobus saanensis SP1PR4] Length = 330 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 41/126 (32%), Gaps = 24/126 (19%) Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-------YQQAASLGEEYITQYPESKNV 130 F + + + A + A + G +A + I P + Sbjct: 213 REFEEAEQRY---RYATEVDPFYALAFFDLGNVLDELQRLPEAIVAYQRAIALVP--EYA 267 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 D +Y + ++Y + Q + L+Y V P+ AR T R LA Sbjct: 268 D-AHYNLALAYER--------QGQRRKALKYWQAYVRLDPVGPWATHAR---TQARRILA 315 Query: 191 AKEVEI 196 +++ I Sbjct: 316 TEKLSI 321 >gi|296413480|ref|XP_002836440.1| hypothetical protein [Tuber melanosporum Mel28] gi|295630261|emb|CAZ80631.1| unnamed protein product [Tuber melanosporum] Length = 763 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 3/71 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + +A +L+ KA ++ + + +K+L SA Y G Y+ A S + Sbjct: 249 LLNRAQAYLELGYNEKALIDADKVLS---YEPLNQKALYRSALACYKDGDYESAKSRLVK 305 Query: 120 YITQYPESKNV 130 + ++PE+KN Sbjct: 306 LLKKFPENKNA 316 >gi|229148579|ref|ZP_04276833.1| hypothetical protein bcere0011_1550 [Bacillus cereus m1550] gi|228634837|gb|EEK91412.1| hypothetical protein bcere0011_1550 [Bacillus cereus m1550] Length = 254 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 5/58 (8%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQ 71 + KF L +AV VG + ++ V+ ++E+ + KA K + Sbjct: 1 MKKFILISSLVLAVGLGVGCSNEKTKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNE 58 >gi|149187171|ref|ZP_01865469.1| hypothetical protein VSAK1_16647 [Vibrio shilonii AK1] gi|148838707|gb|EDL55646.1| hypothetical protein VSAK1_16647 [Vibrio shilonii AK1] Length = 629 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 55/165 (33%), Gaps = 38/165 (23%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 +F S + L G+ S+ +DS + Q ++ +++++ A F+ Sbjct: 319 VVFCSPLLAILFGFNSNSAEASIIDSAFNN--QNQL---GYHAFQDKDYESAKNLFSN-- 371 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A QY G YQQA + ++ Y +G +YAQ Sbjct: 372 -----KQW-------LAAAQYENGDYQQAIDNLQ-------GESDIS-ALYNLGNAYAQ- 410 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 +++ + N A+F + + ++ + Sbjct: 411 -------HGELVKAADMYQQVLNQQPNH---ADAKFNLNLVKDAM 445 >gi|126739137|ref|ZP_01754831.1| TPR domain protein [Roseobacter sp. SK209-2-6] gi|126719754|gb|EBA16462.1| TPR domain protein [Roseobacter sp. SK209-2-6] Length = 217 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 7/73 (9%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAA 114 +E+ ++ + ++ A E F+Q P +A +++ FV + + QA Sbjct: 89 AQEILDRGMNRRASYDYLGALEDFDQLISYCPNYAEGYNQRA-----FVHFLQRDFAQAL 143 Query: 115 SLGEEYITQYPES 127 + E+ I P Sbjct: 144 ADLEQAIELSPRH 156 >gi|158522428|ref|YP_001530298.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] gi|158511254|gb|ABW68221.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans Hxd3] Length = 762 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 64/221 (28%), Gaps = 42/221 (19%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y + F ++ ++A F Q R P ++ K+ + G ++ A + + Sbjct: 499 YNLGLAFFDLKDMAQARTAFEQTLRVNPLYS----KAHNNLGVILMQEGDHEAAVAAYQR 554 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + Y +G+ Q Q + + + Y A Sbjct: 555 ALK---TDPRFAQAYNNLGIIAYQ--------QGNPDQAASFFKKALTADP--AYAGAAN 601 Query: 180 FYVTVGRNQLAAK-----EVE---------------IGRYYLKRGEYVAAIPRFQLVLAN 219 + R + E++ + + Y G AI ++Q LA Sbjct: 602 N-LARVRQTIEKHGPAITELKQMLHKTPNDVDLSCRLAQVYQAAGMRYGAISQYQKALAL 660 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + A+ L Y A+ +A E + P Sbjct: 661 QPGHGPSLNALGVL---YAAMGQPAKAVECFRKLSALMPGN 698 >gi|118380177|ref|XP_001023253.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89305020|gb|EAS03008.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 964 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 47/156 (30%), Gaps = 38/156 (24%) Query: 62 EKAVLFLKEQNFSKAYEYF-------NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 +K + ++++ +A E + ++L KY +A Sbjct: 210 QKGNDAMAKEDYKQAVEMYSLGLDSMKDIKAL-----WTNRAL-----AYIKLKKYSKAI 259 Query: 115 SLGEE-------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 + Y +S++ + +L SYA+ + + K L + ++ Sbjct: 260 EDCTRILDYCECFEEGYTKSRDSAFKAFLR-RSYARKEK------KDYKQALDDILEALK 312 Query: 168 RYTNSPYVKGARFYVTVGRNQ-------LAAKEVEI 196 Y N + + + L E E+ Sbjct: 313 LYPNDKAALDLKTELEFIQKHKEQASKLLPKHEFEV 348 >gi|119358229|ref|YP_912873.1| hypothetical protein Cpha266_2461 [Chlorobium phaeobacteroides DSM 266] gi|119355578|gb|ABL66449.1| conserved hypothetical protein [Chlorobium phaeobacteroides DSM 266] Length = 222 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 5/121 (4%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S+T + + +K L E+ ++KA F + FP RK+ A + + Sbjct: 16 SMTARFDEYRLMQKGNLLYTEKAYAKAETVFRDLADKFPSGYETRKARYNLAHALFMQQR 75 Query: 110 YQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +++A + +E P S+ + Y G S AQ +D + + +S +ER Sbjct: 76 FKEAGQVYKEVSKTVPTESQLLRAAQYNEGNSLAQQ----AFDTTQKEEKKRLLSLAIER 131 Query: 169 Y 169 Y Sbjct: 132 Y 132 >gi|320104419|ref|YP_004180010.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Isosphaera pallida ATCC 43644] gi|319751701|gb|ADV63461.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Isosphaera pallida ATCC 43644] Length = 688 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 39/120 (32%), Gaps = 22/120 (18%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q + + RY GA + + + LA E +VAA Sbjct: 432 QGGPIASYAAFRKALARYALDSEEPGANL-LDIQKRLLADLE-----------AFVAA-- 477 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Y + A EA+ +L A +A+ + +R+P+ R + +K Sbjct: 478 --------YPQSAEAPEALLQLANVNEFNADEAKAKSYYQTLAKRFPESGPGRKAQGALK 529 >gi|242019950|ref|XP_002430421.1| ran-binding protein, putative [Pediculus humanus corporis] gi|212515551|gb|EEB17683.1| ran-binding protein, putative [Pediculus humanus corporis] Length = 2188 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 15/80 (18%) Query: 186 RNQLAAKE-----VEIGRYYLKRGEYVAA---IPRFQLVLANYSDAEHAEEAMARLVEAY 237 RN + E +I + Y K +Y +A I R+ LV + ++ A L + Y Sbjct: 17 RNLKSENERNLKCYQIAKLYYKVKDYNSAIKYINRYILV------SSNSAAAFRLLGDCY 70 Query: 238 VALALMDEA-REVVSLIQER 256 AL L D+A + ++ Sbjct: 71 FALNLKDKAFNSYKNSLELN 90 >gi|254415985|ref|ZP_05029741.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196177160|gb|EDX72168.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 1039 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 13/132 (9%), Positives = 36/132 (27%), Gaps = 15/132 (11%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAV----CFLVGWERQSSRDVYLDSVT---- 52 M L + + A+ + F LT+ S+ V + G Sbjct: 4 MPVFLTQRQKWLTSLAWGISAFLLTLVLSLGVFPTMAQMSGTMESGQPSGIEPLPELMSL 63 Query: 53 ----DVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLL--MSAFVQY 105 ++ ++ ++ ++ A ++ ++++ A Sbjct: 64 KRQLQTMSTAQLVQQGNQSYQQGQYTDAITFWQQALETFASPGNQLNQAMILSNLALAYQ 123 Query: 106 SAGKYQQAASLG 117 G + +A Sbjct: 124 KLGNWSEAQDAI 135 >gi|254416973|ref|ZP_05030720.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196176140|gb|EDX71157.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 746 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 20/164 (12%), Positives = 47/164 (28%), Gaps = 28/164 (17%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFL 68 + K + I ++A G + + D +++++ Sbjct: 1 MSKIPVQIGVALATLMTGGIASATVQTPIEPMKFDRTPTTMPIAQAQLLDQLWQQVSQLR 60 Query: 69 KEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 + +A + + P F + F + G+Y+ A + +E + P Sbjct: 61 GVGKYREAIAILERIVQIQPEAFLAWYWRGE---IFSSW--GQYESAIASYDEALRLQPS 115 Query: 127 SKNVDY--VYYLVGMSYAQMIRD----VPYDQRATKLMLQYMSR 164 Y Y G + ++ R + Q T + Sbjct: 116 -----YLLAQYKKGQALYELQRYQAAVTTWQQTLTLNAESEYEQ 154 >gi|193084158|gb|ACF09823.1| TPR-repeat protein [uncultured marine crenarchaeote AD1000-207-H3] Length = 272 Score = 38.2 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 17/139 (12%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++ +A+ F++++ A F + + P ++ KYQ A + Sbjct: 11 EDLLHQAMSFMEKRQPKSAIPLFKKIVKQDP---KNTDAMYNQGLALNQLRKYQDAITCF 67 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 ++ + P K V G++ A++ T +Y + +E +S Y Sbjct: 68 DKTLEINP--KYVA-AINNKGIALAEL--------GNTDDAFEYYDKAIEI--DSKYAA- 113 Query: 178 ARFYVTVGRNQLAAKEVEI 196 A + V ++L + I Sbjct: 114 AHYNKGVLYDKLLQHDEAI 132 >gi|329906688|ref|ZP_08274484.1| Heat shock protein [Oxalobacteraceae bacterium IMCC9480] gi|327547183|gb|EGF32044.1| Heat shock protein [Oxalobacteraceae bacterium IMCC9480] Length = 391 Score = 37.8 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 9/70 (12%) Query: 52 TDVRYQREV---YEKAVLFLKEQNFSKAYEYFNQC-SRDFPFAGVARKSLLMSAFVQYSA 107 D+ + +V YE +LK +A E FN+ + + AR++LL Sbjct: 100 PDLPLEHQVHAQYELGQDYLKAGLLDRAEETFNRLVETQY--SAQARRALLEI---YQRE 154 Query: 108 GKYQQAASLG 117 ++ +A Sbjct: 155 KEWTRAIDAA 164 >gi|320182592|gb|EFW57482.1| Cellulose synthase operon protein C [Shigella boydii ATCC 9905] Length = 1111 Score = 37.8 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 397 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 453 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 454 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHNQDRAALAH---INSLP 510 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + +V R S V + G+ A ++ + Sbjct: 511 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 564 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 565 DWAQQRRDYTAARTAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 617 Score = 35.9 bits (82), Expect = 6.2, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 310 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 366 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 367 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 412 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 413 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 461 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 462 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 491 >gi|255644906|gb|ACU22953.1| unknown [Glycine max] Length = 324 Score = 37.8 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 39/141 (27%), Gaps = 18/141 (12%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYS 106 ++ + + ++ F K + KA + Q + P + ++ Sbjct: 3 ETKEGSGSEMSLKDQGNEFFKSGKYLKAAALYTQAIKLDPSNPTLYSNRAA-----ALLQ 57 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 K +A E I P+ + Y+ G S + ++ L + Sbjct: 58 LDKLNKALDDAEMTIKLKPQWEKG---YFRKG-SILEAMKRYD-------DALASFQIAL 106 Query: 167 ERYTNSPYVKGARFYVTVGRN 187 + S V + Sbjct: 107 QYNPQSQEVSKKIKKINQLVK 127 >gi|228956613|ref|ZP_04118406.1| hypothetical protein bthur0005_1570 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228803039|gb|EEM49864.1| hypothetical protein bthur0005_1570 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 254 Score = 37.8 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 5/58 (8%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQ 71 + KF L +AV VG + ++ V+ ++E+ + KA K + Sbjct: 1 MKKFILISSLVLAVGLGVGCSNEKTKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNE 58 >gi|298529131|ref|ZP_07016534.1| protein of unknown function DUF181 [Desulfonatronospira thiodismutans ASO3-1] gi|298510567|gb|EFI34470.1| protein of unknown function DUF181 [Desulfonatronospira thiodismutans ASO3-1] Length = 575 Score = 37.8 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 38/99 (38%), Gaps = 6/99 (6%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + + L+++ +A +YF + P + S SA+ ++ + I Sbjct: 431 QGMNLLRQEEHQQAAKYFARAESLQPDSESRGLSAFYSAYALSGLHRWPETIEHLNRAIE 490 Query: 123 QYPESKNVDYVYY-LVGMSYAQMIRDVPYDQRATKLMLQ 160 P K Y+ L G++Y + +D + + LQ Sbjct: 491 LDPLVKE----YFNLRGVAYFKQ-KDYEHAIDDFQKALQ 524 >gi|294658330|ref|XP_002770760.1| DEHA2F07040p [Debaryomyces hansenii CBS767] gi|202953050|emb|CAR66287.1| DEHA2F07040p [Debaryomyces hansenii] Length = 655 Score = 37.8 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 19/43 (44%) Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 A R + L Y H E M L E Y ++ ++++A V Sbjct: 89 AADRLTMALEKYPHVTHTGEVMQELGECYFSMGMVEQAHSAVQ 131 >gi|241206107|ref|YP_002977203.1| adenylate/guanylate cyclase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859997|gb|ACS57664.1| adenylate/guanylate cyclase with TPR repeats [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 595 Score = 37.8 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 4/60 (6%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A +S G+Y+QA + E+ + Q +S+ Y L+ Y + R ++A + L+ Sbjct: 498 ADAHFSLGEYEQAIAAIEQRLQQNSQSE-TAYA--LLASCYGHLDR-PEESRQAWEKALR 553 >gi|166363119|ref|YP_001655392.1| TPR repeat-containing protein [Microcystis aeruginosa NIES-843] gi|166085492|dbj|BAG00200.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843] Length = 1379 Score = 37.8 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 53/177 (29%), Gaps = 42/177 (23%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARK-----------------SLLMS 100 Y + L +++KA E ++ + + + S L Sbjct: 1118 YYNQQKYELALADWNKAIELDSKLAMAYSNRGNIYNDQQKYELALADFNKAIELDSKLAM 1177 Query: 101 AFV-----QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 A+ Y KY+ A + + + P N+ Y G Y +D Sbjct: 1178 AYSNRGNLYYLQQKYELALADYNKALDINP---NLAEAYLGRGGIYYYQQKD-------- 1226 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY----LKRGEYVA 208 +L L ++ +E N R + + E+ + Y + + + A Sbjct: 1227 ELALADFNKAIEINPNLVEAYNNRGNLYYLQQ---KYELALSDYNKAIKINKNAWFA 1280 >gi|119511358|ref|ZP_01630471.1| TPR repeat protein [Nodularia spumigena CCY9414] gi|119463980|gb|EAW44904.1| TPR repeat protein [Nodularia spumigena CCY9414] Length = 250 Score = 37.8 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 20/139 (14%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVY--------------LDSVTDVRYQREVY 61 Y + + I S+ F+VG + L + ++++ Sbjct: 1 MYSMVFWRCLIASSVMSLFMVGCGDGTGTSTKYATQVVQEINVAQLLTEAEASQKAQKLF 60 Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A L Q++ A + +++ P + S +Y +A + E+ I Sbjct: 61 DQANGLLDTQDYQDAVQVYDKAIAVQPKNPDT---WINRGNALTSLQQYSEALASYEQAI 117 Query: 122 TQYPESKNVDYVYYLVGMS 140 P N D +Y G + Sbjct: 118 ALQP---NKDEAWYNRGNA 133 >gi|77748781|ref|NP_644665.2| polysaccharide deacetylase [Xanthomonas axonopodis pv. citri str. 306] Length = 900 Score = 37.8 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 36/127 (28%), Gaps = 20/127 (15%) Query: 62 EKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 E+ + KE+ + A E F A + FV Y G++ ++A E Sbjct: 791 ERGLQLYKEKRYVDAAEQFAEALKLR---PDFA-LAANNLGFVYYRQGRFAESARWLENT 846 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPYVKGA 178 + P ++Y + D+ + + + A Sbjct: 847 LKIDPS----------RAVAYLNLGDAYAKAGDRDKARKAYSTYLELQ---PQGSGAEQA 893 Query: 179 RFYVTVG 185 R + Sbjct: 894 RTQLQSL 900 >gi|27377562|ref|NP_769091.1| hypothetical protein blr2451 [Bradyrhizobium japonicum USDA 110] gi|27350706|dbj|BAC47716.1| blr2451 [Bradyrhizobium japonicum USDA 110] Length = 232 Score = 37.8 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 56/177 (31%), Gaps = 28/177 (15%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV----YE-KAVLFLKEQNFSKA 76 L + ++ +V + D+ + + + YE + + L+ ++ +A Sbjct: 29 IVLGVLIGLSTHMVVNCGDEDEPDICAAVIGFSPLRGSLIAFAYEGRGRIALRHGDWRRA 88 Query: 77 YEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 F++ P ++ L A + G + A + +E I + Y Sbjct: 89 IADFDEAIHLNP-----NRASLYRDRAEARRQNGDLELAIADYDEAIA---HDPKLAAPY 140 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 + G++ A D+ + + V A+ + G LA Sbjct: 141 HQRGLALA-ATGDLDR-------AILSYNTAVRLAP-----SDAQARLDRGLAFLAR 184 >gi|328869262|gb|EGG17640.1| hypothetical protein DFA_08636 [Dictyostelium fasciculatum] Length = 921 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 10/74 (13%), Positives = 25/74 (33%), Gaps = 7/74 (9%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGK 109 + E+ ++ E+++ A +++ + P + + A Y G Sbjct: 4 PATKRSDELRQQGNRKYTEKDYKAAIKFYEEARTLTP-----ADAAIPSNLAASFYELGM 58 Query: 110 YQQAASLGEEYITQ 123 Y +A + I Sbjct: 59 YDKALLYSQRTIDL 72 >gi|327405135|ref|YP_004345973.1| hypothetical protein Fluta_3161 [Fluviicola taffensis DSM 16823] gi|327320643|gb|AEA45135.1| hypothetical protein Fluta_3161 [Fluviicola taffensis DSM 16823] Length = 703 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 24/190 (12%), Positives = 52/190 (27%), Gaps = 54/190 (28%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRD-----------------------FPFAGVARKSLL 98 E+A +++N A E F +P + +++L Sbjct: 129 EEAYDSYQKKN-DWADEKFKAIYSRDSIGYQKAKTANSSAGFDLFLKKYPESTFQKEALN 187 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 +QY + S + Q+P + V +D Y Sbjct: 188 NYYRLQYIENTDGKTVSSYLGFEKQFPSNPYVADA------------QDQVYHMSTKGSR 235 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 +Q ++ Y + V+ A + ++ + Y ++ R Sbjct: 236 VQDFKVFIKTYPKNRNVENAWRKL---------YQLYMSDY---------SLERLDKFQK 277 Query: 219 NYSDAEHAEE 228 + D + E Sbjct: 278 EFPDYPYTSE 287 >gi|322500663|emb|CBZ35740.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 693 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 6/70 (8%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 ++++ + +A E +FP + A LM A+ Y G Y +AASL E+ P Sbjct: 61 YIRDHQYEEAVELLATQLEEFPRSRAA--VSLM-AYCYYMMGDYGEAASLYEQLTKICPN 117 Query: 127 SKNVDY-VYY 135 + Y VYY Sbjct: 118 IEE--YRVYY 125 >gi|292654290|ref|YP_003534187.1| tetratricopeptide repeat-containing protein [Haloferax volcanii DS2] gi|291371884|gb|ADE04111.1| tetratricopeptide repeat protein [Haloferax volcanii DS2] Length = 246 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 13/114 (11%), Positives = 34/114 (29%), Gaps = 10/114 (8%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 K + + + +A + + + + A + A+ + AG+ A E + Sbjct: 105 NKGAAHGQLEEWDEAIGSYREALKLDDDSEHAATAHTNLAYALWEAGQTADALDHAERAV 164 Query: 122 TQYPESKNVDY----VYYLVGM------SYAQMIRDVPYDQRATKLMLQYMSRI 165 P Y + G+ ++ IR + + + + Sbjct: 165 ELDPRFPQAWYNRGFFLHERGLNEDAVNAFDNAIRLGMRTPGVHEEKARALEEL 218 >gi|291227751|ref|XP_002733846.1| PREDICTED: SH2 domain binding protein 1-like, partial [Saccoglossus kowalevskii] Length = 1197 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 54/141 (38%), Gaps = 24/141 (17%) Query: 133 VYYLVGM------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG------ARF 180 Y L+ + + Q RD ++R L +++ + Y A+ Sbjct: 553 AYSLLALGNVWLQTLYQPTRDKDKEKRHQDRALAMYKQVLRNDGKNIYAANGIGAVLAQK 612 Query: 181 -YVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 Y+ R+ + +E + + Y+++ +Y++AI ++ L + H E Sbjct: 613 GYIREARDVFSQVREATADMRDVWLNLAHIYVEQKQYISAIQMYENCLRKFYKY-HNTEV 671 Query: 230 MARLVEAYVALALMDEAREVV 250 M L AY M + ++V+ Sbjct: 672 MLYLARAYFRAGKMMDCKKVL 692 >gi|281347470|gb|EFB23054.1| hypothetical protein PANDA_015372 [Ailuropoda melanoleuca] Length = 616 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 26/210 (12%), Positives = 61/210 (29%), Gaps = 31/210 (14%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAY 77 + K + + + LD +T R + +Y A +K + +A Sbjct: 17 MNKGLIELSPIQQALIYSFCKNHDKAIQVLDGITVNRPELTMYTLLAKAQMKAKRNKEAV 76 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAG----KYQQAASLGEEYITQYPESKNVDYV 133 F + F + ++ SA Y+ G + + + + Sbjct: 77 RMFKKALDIFSHSDKGPNAIQASADCLYNLGLCYMEEGNVQMAFDCFTKAVKANPEFAEG 136 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 +Y G+ ++ +D + +R + + +++A Sbjct: 137 FYQRGLCKVKLHKDS---------SVLDFNRAITLNP---------KHYQAYLSRVA--- 175 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 +Y +G Y AI + Y + Sbjct: 176 -----FYGLKGRYSKAILNCNEAIKIYPQS 200 >gi|239828288|ref|YP_002950912.1| hypothetical protein GWCH70_2973 [Geobacillus sp. WCH70] gi|239808581|gb|ACS25646.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. WCH70] Length = 493 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 29/71 (40%), Gaps = 7/71 (9%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 E+A L+++ F +A ++P ++ A + G Q+A + E+ Sbjct: 156 ERARFLLEKEKFPEAIRLLETIIANYPEFWSAYN-----NLALAYFYNGNVQKAQEIVEQ 210 Query: 120 YITQYPESKNV 130 + + P + + Sbjct: 211 VLERNPGNLHA 221 >gi|225462328|ref|XP_002265699.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1110 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 7/68 (10%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGE 118 + +A L+++ + KA E + Q S+ FP A K + L G+ +++ S+ E Sbjct: 239 FHRASLYVELGEYQKAAESYEQISQLFPENVEAPKTGAKL-----YKKCGQVERSVSILE 293 Query: 119 EYITQYPE 126 +YI +P Sbjct: 294 DYIKDHPT 301 >gi|220909583|ref|YP_002484894.1| lytic transglycosylase catalytic subunit [Cyanothece sp. PCC 7425] gi|219866194|gb|ACL46533.1| Lytic transglycosylase catalytic [Cyanothece sp. PCC 7425] Length = 735 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 2/81 (2%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y V L++++ A E+ +D+P +A L A G+ QA + + Sbjct: 88 YLLGVDALEQRDGRAALEFLANLEQDYPL--LAAPILTKRAEAFQLTGQTAQATATWKML 145 Query: 121 ITQYPESKNVDYVYYLVGMSY 141 + Q+P+ Y +G + Sbjct: 146 LQQFPQQPEAAQALYGLGQTN 166 >gi|119483782|ref|XP_001261794.1| tetratricopeptide repeat domain protein [Neosartorya fischeri NRRL 181] gi|119409950|gb|EAW19897.1| tetratricopeptide repeat domain protein [Neosartorya fischeri NRRL 181] Length = 1250 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 35/99 (35%), Gaps = 25/99 (25%) Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 R+V+ +SPY A E+ G +Y +G+ A F +A Y Sbjct: 741 RLVDHQPDSPYGPAVLK---------ALNEL--GLFYWNQGKPSQAASMFHAAVAGY--- 786 Query: 224 EHAEEA-----------MARLVEAYVALALMDEAREVVS 251 EH E + + RL AY L+ +A Sbjct: 787 EHLERSDKLNDPSFLLTLHRLGIAYQKLSRFHDAERAFQ 825 >gi|121702613|ref|XP_001269571.1| DnaJ and TPR domain protein [Aspergillus clavatus NRRL 1] gi|119397714|gb|EAW08145.1| DnaJ and TPR domain protein [Aspergillus clavatus NRRL 1] Length = 540 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 3/70 (4%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 F K+ N+++A E F + P + V L A SA +Y +A E + Sbjct: 54 AGNKFFKDGNYNRAIEEFTKAIEINPSSSV---YLSNRAAAYLSANRYLEALEDAERALE 110 Query: 123 QYPESKNVDY 132 P + + Y Sbjct: 111 LDPTNSKIMY 120 >gi|118379651|ref|XP_001022991.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89304758|gb|EAS02746.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 1444 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 42/110 (38%), Gaps = 9/110 (8%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-- 81 L F +I C+L ++ + ++ + Y + F + + +A + Sbjct: 893 LFYFRAIVRCYLGYYQEGIADIDKAIEKSEDNVPKYFYLRGHTFGICKQYKQAISDLSIA 952 Query: 82 -QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 Q ++ +S L A + AG+ A + ++YI+ P N+ Sbjct: 953 IQLDENY------AESYLERAKCYHFAGESNNAFADLQKYISLKPTDPNI 996 >gi|148262188|ref|YP_001228894.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4] gi|146395688|gb|ABQ24321.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens Rf4] Length = 230 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 33/94 (35%), Gaps = 7/94 (7%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVARKSLLMSAFVQYSAGKY 110 D Y + L A E + + + +A + + ++ Y Sbjct: 108 DSTNPEGYYGLGAILLGSGQTDAAIEKLALAEKIYRENGSSLAMDAQYLLGVAYFNKQDY 167 Query: 111 QQAASLGEEYITQ-YPESKNVDYVYYLVGMSYAQ 143 +++ EY+ Y + ++ V YL+G+ Y Sbjct: 168 KRSR----EYLALSYAQKQDDPNVNYLLGLCYLD 197 >gi|332084569|gb|EGI89763.1| cellulose synthase operon protein C [Shigella boydii 5216-82] Length = 1157 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHNQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + +V R S V + G+ A ++ + Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWAQQRRDYTAARTAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|296481652|gb|DAA23767.1| dnaJ homolog subfamily C member 3 precursor [Bos taurus] Length = 504 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 39/114 (34%), Gaps = 4/114 (3%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ E A +KE ++ A + + P +S K +A + Sbjct: 269 NKLIESAEELIKEGRYTDAISKYESVMKTEPGVHEYTIRSKERICHCFSKDEKPVEAIRV 328 Query: 117 GEEYITQYPESKNV--DYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 E + P++ N D YL+ Y + I+D Q + Q + + Sbjct: 329 CSEVLQVEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEK 382 >gi|218201484|gb|EEC83911.1| hypothetical protein OsI_29964 [Oryza sativa Indica Group] gi|222640897|gb|EEE69029.1| hypothetical protein OsJ_28006 [Oryza sativa Japonica Group] Length = 583 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 53/151 (35%), Gaps = 23/151 (15%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ----CSRDFPFAG-VARKSL-------LMSAFVQYSAGK 109 E+ K + +A + + + D F+ ++S L +A + Sbjct: 411 EEGNALFKLGKYVRASKRYEKAAKFIEYDSSFSEDEKKQSKQLKVTCNLNNAACKLKLKD 470 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y+QA L + + +S+NV Y +Y Q+ +L + + +E Sbjct: 471 YKQAEKLCTKVLEL--DSQNVK-ALYRRAQAYMQLAD--------LELAEVDIKKALEID 519 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 ++ V + + ++ + ++Y Sbjct: 520 PDNRQVLDVKLTYKNLKEKVKEYNKKDAKFY 550 >gi|194859710|ref|XP_001969435.1| GG23959 [Drosophila erecta] gi|190661302|gb|EDV58494.1| GG23959 [Drosophila erecta] Length = 1137 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 37/98 (37%), Gaps = 14/98 (14%) Query: 109 KYQQAASLGEEYITQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y +A S ++Y+ + ++ + Y +G++Y ++ R K ++ ++ Sbjct: 129 EYSEALSAYQKYLRFRENNYWTNHAFIYGIGVAYFKL--------RCFKWAIKSFQELLY 180 Query: 168 RYTNSPYVKGARFYVTVGRN-----QLAAKEVEIGRYY 200 N + + +A K +++ Y Sbjct: 181 LSPNFTCANEVHLRLGLMLKHCGEFHVAQKHLQLALLY 218 >gi|45358706|ref|NP_988263.1| hypothetical protein MMP1143 [Methanococcus maripaludis S2] gi|45047572|emb|CAF30699.1| TPR repeat [Methanococcus maripaludis S2] Length = 126 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 3/64 (4%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + E Y K +L + N++++ + F + + P K LM Y+ +Y++A Sbjct: 26 QNPEEYYSKGILQYDDGNYTESIDLFEKAIQLNPEES---KYWLMKGKALYNLERYEEAV 82 Query: 115 SLGE 118 Sbjct: 83 DCYN 86 >gi|27807457|ref|NP_777181.1| dnaJ homolog subfamily C member 3 precursor [Bos taurus] gi|73620802|sp|Q27968|DNJC3_BOVIN RecName: Full=DnaJ homolog subfamily C member 3; AltName: Full=Interferon-induced, double-stranded RNA-activated protein kinase inhibitor; AltName: Full=Protein kinase inhibitor of 58 kDa; Short=Protein kinase inhibitor p58; Flags: Precursor gi|468012|gb|AAA17795.1| PKR inhibitor P58 [Bos taurus] Length = 504 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 39/114 (34%), Gaps = 4/114 (3%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ E A +KE ++ A + + P +S K +A + Sbjct: 269 NKLIESAEELIKEGRYTDAISKYESVMKTEPGVHEYTIRSKERICHCFSKDEKPVEAIRV 328 Query: 117 GEEYITQYPESKNV--DYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 E + P++ N D YL+ Y + I+D Q + Q + + Sbjct: 329 CSEVLQVEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEK 382 >gi|71747364|ref|XP_822737.1| chaperone protein DnaJ [Trypanosoma brucei TREU927] gi|70832405|gb|EAN77909.1| TPR-repeat-containing chaperone protein DNAJ, putative [Trypanosoma brucei] gi|261332515|emb|CBH15510.1| TPR repeat protein [Trypanosoma brucei gambiense DAL972] Length = 499 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 26/193 (13%), Positives = 54/193 (27%), Gaps = 27/193 (13%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 A+ L + + + + +E L+E+NF A + ++ FP Sbjct: 104 ALVVLEACGASPEDKKQIQELHRTAEEGQRGFEAGQRLLEERNFLAAERELVKAAQLFP- 162 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT----QYPESKNVDYVYYLVGMSYAQMI 145 A V G+ QA+ E I + Y Y+ ++ Sbjct: 163 ---------DCAIVGIMLGE-SQASLYPERVIRSLTALSSAHADDTYYLYVRALASYYS- 211 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205 Q + +E ++ + +Q E K Sbjct: 212 -----GQSGLNNAQSILRHTIELDPDNRKATELLKKIRAVESQ--KTEGNAA---FKEKR 261 Query: 206 YVAAIPRFQLVLA 218 + AA+ ++ + Sbjct: 262 FTAAVNCYKAAIE 274 >gi|323934090|gb|EGB30532.1| cellulose synthase operon protein C [Escherichia coli E1520] Length = 1109 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 395 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 451 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 452 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 508 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + +V R S V + G+ A ++ + Sbjct: 509 RAQWN-----NNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 562 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 563 DWAQQRRDYTAARAAYQNVLTREP---ANADAILGLTEVDIAAGDTAAARSQLAKL 615 Score = 35.5 bits (81), Expect = 7.6, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 308 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 364 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 365 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 410 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 411 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 459 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 460 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 489 >gi|302671233|ref|YP_003831193.1| hypothetical protein bpr_I1877 [Butyrivibrio proteoclasticus B316] gi|302395706|gb|ADL34611.1| hypothetical protein bpr_I1877 [Butyrivibrio proteoclasticus B316] Length = 595 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 40/117 (34%), Gaps = 25/117 (21%) Query: 72 NFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 N ++ EYF Q + + + L+ A Y G Y++ ++Y + + Sbjct: 236 NTTRRIEYFEQYQKTYQGYGKY----WLVLAESYYELGDYEKCIDAIDKYESMH------ 285 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 I D K + + E Y++S YV A Y+T N Sbjct: 286 --------------IDIFRKDHDYAKALAIALDAADEVYSSSEYVIHANHYLTEMLN 328 >gi|237709935|ref|ZP_04540416.1| BatE [Bacteroides sp. 9_1_42FAA] gi|229456028|gb|EEO61749.1| BatE [Bacteroides sp. 9_1_42FAA] Length = 272 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 14/115 (12%), Positives = 33/115 (28%), Gaps = 6/115 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY---EKAVLFLKEQNFSK 75 + K + F I+ + S V + + + +A +F+ Sbjct: 1 MTKIYFILIFLISFVTVYAQNESDSAQVAAQTEMPQNAAVQTFPTKTEADSAYIRNDFAA 60 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + E + R+ G + Y +A E + P + ++ Sbjct: 61 SVEIYENILRN---EGESSDIYYNLGNSYYKMNNIAKAVLNYERALLLNPGNSDI 112 >gi|225166118|ref|ZP_03727847.1| hypothetical protein ObacDRAFT_5569 [Opitutaceae bacterium TAV2] gi|224799639|gb|EEG18139.1| hypothetical protein ObacDRAFT_5569 [Opitutaceae bacterium TAV2] Length = 463 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 7/75 (9%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + +++ D + E A L + +A +Y +P A + A + Sbjct: 302 EQVVEATPDDEAAKSALETAKTTLSQFRLKEAQDYCEH----YP-NDYA--ARFNLANLY 354 Query: 105 YSAGKYQQAASLGEE 119 Y AG Y+ A + ++ Sbjct: 355 YEAGDYEDAIANYQQ 369 >gi|149178854|ref|ZP_01857434.1| hypothetical protein PM8797T_17774 [Planctomyces maris DSM 8797] gi|148842329|gb|EDL56712.1| hypothetical protein PM8797T_17774 [Planctomyces maris DSM 8797] Length = 467 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 14/123 (11%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 +T Y++ +++L +A + F + + P A +LL AG Sbjct: 137 PELTPEEKANFHYQRGMIYLPLNKPQEAAQDFTETIKLSP-DHFA--ALLALPDAYALAG 193 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + A + + I + P S VY M Y Q Q + + SR ++ Sbjct: 194 NNEMALASFNQVIQKQPNSPV---VYNNRAMFYQQ--------QGKLQEAINDFSRAIQI 242 Query: 169 YTN 171 Sbjct: 243 EPK 245 >gi|145488549|ref|XP_001430278.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124397375|emb|CAK62880.1| unnamed protein product [Paramecium tetraurelia] Length = 478 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 27/74 (36%), Gaps = 11/74 (14%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 A + G Y++A + + + YY G+ ++ DQ+ + + Sbjct: 31 LANAYKNQGNYEEAIVDYSKALELNSKHAA---AYYNRGLIFS--------DQQIYEKAI 79 Query: 160 QYMSRIVERYTNSP 173 S+ +E +P Sbjct: 80 MDYSKAIELLPANP 93 >gi|86131711|ref|ZP_01050308.1| conserved hypothetical protein [Dokdonia donghaensis MED134] gi|85817533|gb|EAQ38707.1| conserved hypothetical protein [Dokdonia donghaensis MED134] Length = 261 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 19/52 (36%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 D R +++ V ++ A +Y Q ++ + A + L Q Sbjct: 207 DFTTPRFLFKAGVTAIELGKMDAAVKYLTQVKEEYATSDYAAQVDLYLGQAQ 258 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 42/126 (33%), Gaps = 18/126 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG----VARKSLLMSAFVQYSAGKYQQAASL 116 Y + +L+ +++ KA + F+ +A + G+ ++A Sbjct: 143 YYAGMSYLEVKDYQKAISHLQD------FSSDDQMLAPLAKGAIGDAFMQLGQPEEALGY 196 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 E+ + G++ ++ ++Y++++ E Y S Y Sbjct: 197 YEKAAGLNANDFTTPRFLFKAGVTAIEL--------GKMDAAVKYLTQVKEEYATSDYAA 248 Query: 177 GARFYV 182 Y+ Sbjct: 249 QVDLYL 254 >gi|294054025|ref|YP_003547683.1| hypothetical protein Caka_0488 [Coraliomargarita akajimensis DSM 45221] gi|293613358|gb|ADE53513.1| hypothetical protein Caka_0488 [Coraliomargarita akajimensis DSM 45221] Length = 368 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 3/76 (3%) Query: 197 GRYYLKRGEYVAAIPRF--QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 G YYLKR + A+ R + + E M R + Y + + + A+ V + Sbjct: 293 GTYYLKREQLKEAM-RAVSEGIAFARPTEAWTPELMFRSAQLYERIEMPEIAQSVYQELI 351 Query: 255 ERYPQGYWARYVETLV 270 +P WA + ++ Sbjct: 352 LFFPASEWAEEAQAVI 367 >gi|237725398|ref|ZP_04555879.1| aerotolerance-related protein BatE [Bacteroides sp. D4] gi|265753587|ref|ZP_06088942.1| BatE protein [Bacteroides sp. 3_1_33FAA] gi|229436085|gb|EEO46162.1| aerotolerance-related protein BatE [Bacteroides dorei 5_1_36/D4] gi|263235301|gb|EEZ20825.1| BatE protein [Bacteroides sp. 3_1_33FAA] Length = 272 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 14/115 (12%), Positives = 33/115 (28%), Gaps = 6/115 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY---EKAVLFLKEQNFSK 75 + K + F I+ + S V + + + +A +F+ Sbjct: 1 MTKIYFILIFLISFVTVYAQNESDSAQVAAQTEMPQNAAVQTFPTKTEADSAYIRNDFAA 60 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + E + R+ G + Y +A E + P + ++ Sbjct: 61 SVEIYENILRN---EGESSDIYYNLGNSYYKMNNIAKAVLNYERALLLNPGNSDI 112 >gi|291190510|ref|NP_001167125.1| RNA polymerase-associated protein CTR9 homolog [Salmo salar] gi|223648266|gb|ACN10891.1| RNA polymerase-associated protein CTR9 homolog [Salmo salar] Length = 1158 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 99/276 (35%), Gaps = 39/276 (14%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 A L RA E + ++T +++A + E + +Y + + + + Y Sbjct: 476 ASLDRAKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYL 535 Query: 63 K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + + NF +A ++F + ++D P + L A ++ E Sbjct: 536 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 589 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSPY 174 + Q P ++N Y +G + Q + D+ R L +++ + + Y Sbjct: 590 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLY 648 Query: 175 VKGA-------RFYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVL 217 + Y R+ A +E + + Y+++ +Y++A+ ++ L Sbjct: 649 AANGIGAVLAHKGYYREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCL 708 Query: 218 ANY---SDAEHAEEAMARLVEAYVALALMDEAREVV 250 + + E + L A + E ++ + Sbjct: 709 KKFYKHQNT----EVLLYLARALFKCGKLQECKQTL 740 >gi|300940851|ref|ZP_07155381.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1] gi|300454409|gb|EFK17902.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1] Length = 944 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + +V R S V + G+ A ++ + Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663 Score = 35.5 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|254410549|ref|ZP_05024328.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196182755|gb|EDX77740.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 864 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 41/115 (35%), Gaps = 13/115 (11%) Query: 27 FFSIAVCFLVGW---------ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 F +++ LV + + + ++ + ++++ K + + FS+A Sbjct: 11 FIGLSLASLVFCISFHPWSTGQAEPATEIQQQQLLTPASEKQLVSKGIASYQIGEFSQAI 70 Query: 78 EYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + Q ++++ A G+ QA + E+ I Y S + Sbjct: 71 NLWEQALPQ--ITDENDRAIVHNNLALAYRQTGELAQAIAHWEKAIQIYQASPDA 123 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 30/227 (13%), Positives = 68/227 (29%), Gaps = 34/227 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+A + +A + + + + + +S G Y QA S + Sbjct: 135 EQAQAYNDLGQHPRAITLLESAIELATKYQDSLAEAAAQGALGNAHWSLGNYDQAISAHK 194 Query: 119 EYIT----QYPESKNVDYVYYLVGMSY-------------AQMIRDVPYDQRATKLMLQY 161 + + + + VG Y A++ DV R T+ LQ Sbjct: 195 QSLKIARALN-NNSFIATALNNVGNVYVSRASRSSYQAQVAELEGDVEQATRLTQEALQD 253 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQL-------AAKEVEIGRYYLK------RGEYVA 208 ++ + S A +T + + + + + R + Sbjct: 254 WTQARLFFEQSLETAQALGSLTEIKALMNLNRWLISRHSATVADNSAEPLSEGDRAFLQS 313 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 R + +L D+ + L E++ + +E + L+ + Sbjct: 314 NWQRVRELLPGIPDSRQKAYTLIHLAESFQQIESEASIQESIQLLTQ 360 >gi|296134920|ref|YP_003642162.1| TPR repeat-containing protein [Thiomonas intermedia K12] gi|295795042|gb|ADG29832.1| TPR repeat-containing protein [Thiomonas intermedia K12] Length = 364 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 54/150 (36%), Gaps = 27/150 (18%) Query: 42 SSRDVYLDSVTDVRYQREVYE--KAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSL 97 SS +D++ + + Y+ K V+ +++ ++A + F + +P ++ Sbjct: 37 SSALTQVDTLLAQKPKDPQYQFLKGVILTEQKKDAQAIKIFQSLTEQYPELPEPYNNLAV 96 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 L + Q G+Y++A + + I P Y + I KL Sbjct: 97 L---YAQ--QGQYEKARAALDMAIRTNPS--------YATAQANLGDI--------YAKL 135 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 Q + ++ + AR + + R Sbjct: 136 ASQAYQKALQLAPD--ENASARVKLNLIRE 163 >gi|254523546|ref|ZP_05135601.1| Tetratricopeptide repeat family protein [Stenotrophomonas sp. SKA14] gi|219721137|gb|EED39662.1| Tetratricopeptide repeat family protein [Stenotrophomonas sp. SKA14] Length = 212 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 6/90 (6%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 IA+ + GW+ D + Y+KA+L L++ A + Sbjct: 31 VVIAIGAIAGWQW-----YQKDQGGKLASANVEYQKALLGLQQNKLDDASKAVKALEA-G 84 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 P + + L A Q AGK ++A + Sbjct: 85 PSSIYGDLAALQLAKAQVDAGKNEEALATL 114 >gi|159029354|emb|CAO90730.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 272 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 54/156 (34%), Gaps = 32/156 (20%) Query: 67 FLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 L++ + +A E + ++ P + LL+ A + Y A + + +P Sbjct: 82 RLQQGDLKQAIEPLEKLAQLNPQQSDY----LLLLAEAKQQIEDYAGATASYRSLLVSHP 137 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER------YTNSPYVKGAR 179 ++ L G++ + Q + + ++R N+P Sbjct: 138 QNLRA-----LTGLTN------LFLSQNRHTEAISLVKDTIDRALKAAADPNNP------ 180 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + + ++ +G+ Y ++ Y A+ ++ Sbjct: 181 ASLIDIVSV----QLLLGKIYFEQQNYPEALNAYKQ 212 >gi|118082610|ref|XP_416208.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 554 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 70/204 (34%), Gaps = 24/204 (11%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 L ++F+ A + + L + + G Y++A E Q Sbjct: 31 EELLAGRDFTGAIALLE--FQRHA-GEQQEDADLWIGYCAFHLGDYKRALEEYEALTKQP 87 Query: 125 PESKNVDYV-----YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + +V +V Y+ +GM ++L + + + ++++ + + Sbjct: 88 SCNPDV-WVNLACTYFFLGM--YTQAEQAALKAPKSRLQNRLLFHLAHKFSDEKKLMNSH 144 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA---RLVEA 236 + ++ + + R Y AI ++ +L E +A + Sbjct: 145 QNLQDIT----EDQLSLASIHYMRSHYQEAIDIYKCILLE------NREYLALNVYVALC 194 Query: 237 YVALALMDEAREVVSLIQERYPQG 260 Y L D ++EV+++ ++ P Sbjct: 195 YYKLDYYDVSQEVLAVYLQQVPDS 218 >gi|67920457|ref|ZP_00513977.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] gi|67857941|gb|EAM53180.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] Length = 155 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 7/72 (9%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAAS 115 RE+ ++ FL + NF KA E + +++P FA R+++L +S +Y+QA Sbjct: 41 RELLRRSQSFLDKGNFQKAEELLTEAIKNYPDFAEAWNRRAVL-----YFSLERYEQAKK 95 Query: 116 LGEEYITQYPES 127 E+ I P Sbjct: 96 DCEQVIQLIPYH 107 >gi|326434630|gb|EGD80200.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818] Length = 829 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 71/225 (31%), Gaps = 46/225 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + + + +F +A + + + + P A S L Y+ GKY +A Sbjct: 320 NLGLTYDDKGDFDQAIDLYQKAKQIQAETLGNNHPGTA-AVCSSL--GNAYYAKGKYDKA 376 Query: 114 ASLGEEYI-----TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 + +E + + + Y +G Y ++ K M + + E+ Sbjct: 377 IAYYQEDLAITSEALGEKHPSAAQTYSNIGNVYYAQGEYDSAIKQYEKAMEINLEALGEK 436 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA---EH 225 + + A IG Y +GEY AI F+ Y + +H Sbjct: 437 HPGT-----------------ANTHNNIGNVYFGKGEYDRAIEHFEKARKVYVETLGEKH 479 Query: 226 AEEAMAR--LVEAYVALALMDEAREV--------VSLIQERYPQG 260 A+A + A + D A E + + +P Sbjct: 480 PTTAIAYKGIGNALSSKGEHDTAIEYYAAAKAIRLETLGPTHPDT 524 Score = 37.8 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 24/227 (10%), Positives = 59/227 (25%), Gaps = 41/227 (18%) Query: 55 RYQREVYEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQY 105 + Y ++ + + A + + + P V + Sbjct: 396 PSAAQTYSNIGNVYYAQGEYDSAIKQYEKAMEINLEALGEKHPGTANTHN---NIGNVYF 452 Query: 106 SAGKYQQAASLGEEYITQY-----PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 G+Y +A E+ Y + Y G+ A + +D Sbjct: 453 GKGEYDRAIEHFEKARKVYVETLGEKHPTTAIAY--KGIGNALSSKG-EHDTAIEYYAAA 509 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP--RFQLVLA 218 R+ P + +++ V I +++ A Q + Sbjct: 510 KAIRLETLGPTHPDTAESFSDFGNAHSEIGEYGVAI--------DHLEAAKEIHLQTLGE 561 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREV--------VSLIQERY 257 + + L AY + +A + +++ E++ Sbjct: 562 EHPTTAYT---FNNLAAAYDDMGEYSKAMKYYERARAIKAAVLGEKH 605 >gi|317486512|ref|ZP_07945336.1| tetratricopeptide [Bilophila wadsworthia 3_1_6] gi|316922241|gb|EFV43503.1| tetratricopeptide [Bilophila wadsworthia 3_1_6] Length = 847 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 31/103 (30%), Gaps = 18/103 (17%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +++FA S +C + + +++A K ++ A Sbjct: 1 MFRFAAAFLVSFMLCT---------------APVQAAGFEQTFKEAQAAYKTGKYADAAR 45 Query: 79 YF---NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 F + A+ L +A A Y A ++ E Sbjct: 46 LFVQTADLLKKAKETAKAQMVLGNAAIAYMQAEDYASAVTIYE 88 >gi|261263566|gb|ACX55120.1| Uty [Rattus norvegicus] Length = 1134 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 38/140 (27%), Gaps = 42/140 (30%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 100 EDYSKALSSYQRYYSL-----QTDYWKNAAFLYGLGLVYFYY--------NAFQWAIRAF 146 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ N K + QLA + I Sbjct: 147 QEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALRDSNVCTLSSVEIQFHIAH 206 Query: 199 YYLKRGEYVAAIPRFQLVLA 218 Y + +Y +A ++ +L Sbjct: 207 LYEIQRKYHSAKAAYEQLLQ 226 >gi|261210908|ref|ZP_05925198.1| GGDEF family protein [Vibrio sp. RC341] gi|260839883|gb|EEX66483.1| GGDEF family protein [Vibrio sp. RC341] Length = 651 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 50/138 (36%), Gaps = 14/138 (10%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100 D L + D VY L + + A EY N+ + + Sbjct: 196 DTLLKLLPDYVDPSAVYNDVGLLMSTLGQYEPALEYLNKALEYRQQQGNPLLIAQVEHSL 255 Query: 101 AFVQYSAGKYQQAASLGEEYIT----QYPES--KNVDYVYYLVGMSYAQMIRDVPYDQRA 154 V + GKY+Q+ E +I P + + YV+ +G +Y ++ DQ Sbjct: 256 GDVYFKQGKYEQSI---EHFIQAEKLLSPSNYLFGLAYVHLGLGKAYVELNNFTEGDQ-H 311 Query: 155 TKLMLQYMSRIVERYTNS 172 L Y+++ ++Y S Sbjct: 312 LLQALDYVNQHQDQYLQS 329 >gi|71906424|ref|YP_284011.1| TPR repeat-containing protein [Dechloromonas aromatica RCB] gi|71846045|gb|AAZ45541.1| TPR repeat [Dechloromonas aromatica RCB] Length = 796 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 32/249 (12%), Positives = 83/249 (33%), Gaps = 37/249 (14%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQ 82 L + +A C++ E + ++ + E+Y + ++ + ++ ++A + Sbjct: 109 LLLACRLANCYVGSGELFKANELLSGLLARYPSVGELYLLRGLVLYQLRHDAQAEADLHL 168 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 C P + ++L + Y++AA + P+ +V +Y Sbjct: 169 CLGLAPNSA---QALAALGDIYRDRELYEEAADFVDRAYQLAPDDIHVA-----RARAYL 220 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSP-----------YVKGARFYVTVGRNQL-- 189 + R ++ ++++ + A + + L Sbjct: 221 SLAL------RDWGKAADILAEVLQQAPSDVVAAVNRVAALIESGNALAAIDALEDALRV 274 Query: 190 -AA----KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 A+ E+ + +RG++ A+ + +A + L+ AY L M+ Sbjct: 275 GASEPWVHEMLGAMF-AQRGDWKIAVENLEASVAREPTST---TGWNILIVAYSKLGEME 330 Query: 245 EAREVVSLI 253 +A I Sbjct: 331 KAEAAAKKI 339 >gi|332800235|ref|YP_004461734.1| serine/threonine protein kinase with TPR repeats [Tepidanaerobacter sp. Re1] gi|332697970|gb|AEE92427.1| serine/threonine protein kinase with TPR repeats [Tepidanaerobacter sp. Re1] Length = 487 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 46/146 (31%), Gaps = 32/146 (21%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y K LF + + + +A + + + P A + + A + EE Sbjct: 370 LYLKGKLFFELKRYEEAVKVYEKLVSRNP---DDLNYRYRLACAYGLNSEQENAIDILEE 426 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ-RATKLMLQYMSRIVERYTNSPYVKGA 178 +K GM Y YDQ + K Y + + N Sbjct: 427 ------INKKTP------GMLYIVKKLGHAYDQKKDFKKARAYFNYAMRLDPNDE----- 469 Query: 179 RFYVTVGRNQLAAKEVEIGRY--YLK 202 + R++L G+Y YL+ Sbjct: 470 -----LIRDRLEEY----GKYLGYLR 486 >gi|119490481|ref|ZP_01622942.1| Tetratricopeptide [Lyngbya sp. PCC 8106] gi|119453952|gb|EAW35107.1| Tetratricopeptide [Lyngbya sp. PCC 8106] Length = 868 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 83/254 (32%), Gaps = 46/254 (18%) Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70 + L ALT+ I V + S + D + ++ + L Sbjct: 18 LSPQETPMLNLKALTVAVIIGVLAPILPMNLLSESPVIAQTPDEQKAEQLRIEGFKQLSI 77 Query: 71 QNFSKAYEYFNQCSRDF-PFAGVARKS--LLMSAFVQYSAGKYQQAASLGEE--YI---- 121 + A E + + + ++ L + G+ Q+A + ++ Sbjct: 78 YQYQAAIESLQAALKIYQETGNFSGQAWSLYGLGWAYDDTGQLQKAIESYQASLFLAKEI 137 Query: 122 ---TQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + N + YVY +G Q+ + + +Q A L + N+ Y + Sbjct: 138 EDHRLEAFNFNLIGYVYLQLG----QIEKAIELNQEALTLARR----------NNFYWEE 183 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-----NYSDAEHAEEAMAR 232 A LA +IG Y + +YV A+ Q LA ++ E A++ Sbjct: 184 AL--------FLA----DIGMAYFRLEKYVEAMRFSQQALAIAQKHDFKQIEAY--ALSD 229 Query: 233 LVEAYVALALMDEA 246 L + L +A Sbjct: 230 LGNIFRVLGSTTQA 243 >gi|90412131|ref|ZP_01220137.1| hypothetical protein P3TCK_27579 [Photobacterium profundum 3TCK] gi|90326855|gb|EAS43240.1| hypothetical protein P3TCK_27579 [Photobacterium profundum 3TCK] Length = 249 Score = 37.8 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 10/140 (7%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 + + ++ + + E YEKAV LKE++++ A FN +P + + Sbjct: 111 TADKPESGETYSSDASENEAYEKAVNLILKEKDYAGAVTAFNSFLTTYPESTYKANAHYW 170 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + ++ + +A+ + + +K D +G+ A+ +DV +L Sbjct: 171 LGQLYFTQNQLAEASKEFKAVTSDEKSNKRSD-ALLKLGVI-AERSKDV-------ELAK 221 Query: 160 QYMSRIVERYTNSPYVKGAR 179 +Y ++ Y +S + A Sbjct: 222 KYYQEVISTYPSSTSSRQAE 241 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 40/124 (32%), Gaps = 23/124 (18%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A + ++T YPES +Y +G Y Q + Sbjct: 140 KEKDYAGAVTAFNSFLTTYPESTYKANAHYWLGQLYFT--------QNQLAEASKEFKA- 190 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V S A + V + +K+VE+ + Y Q V++ Y + Sbjct: 191 VTSDEKSNKRSDALLKLGVIAER--SKDVELAKKYY------------QEVISTYPSSTS 236 Query: 226 AEEA 229 + +A Sbjct: 237 SRQA 240 >gi|330995090|ref|ZP_08319007.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT 11841] gi|329576666|gb|EGG58169.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT 11841] Length = 250 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 17/68 (25%), Gaps = 4/68 (5%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A + + +A + + A Y + A E Sbjct: 27 QADSAYAAEKYKEAIPIYTALLKK---GEHA-DIYYNLGNCYYKTDRLALAILNYERAAL 82 Query: 123 QYPESKNV 130 P + +V Sbjct: 83 LDPGNSDV 90 >gi|288925760|ref|ZP_06419691.1| aerotolerance-related exported protein [Prevotella buccae D17] gi|288337415|gb|EFC75770.1| aerotolerance-related exported protein [Prevotella buccae D17] Length = 262 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 8/69 (11%), Positives = 22/69 (31%), Gaps = 4/69 (5%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E A + ++ +A + + + R +G + +A E + Sbjct: 38 ENADAEYTKGDYQQAVKDYEEVLR----SGANADIYYNLGNAYFRLDNITKAILNYERAM 93 Query: 122 TQYPESKNV 130 P + ++ Sbjct: 94 LMQPGNADI 102 >gi|209526542|ref|ZP_03275068.1| TPR repeat-containing protein [Arthrospira maxima CS-328] gi|209493048|gb|EDZ93377.1| TPR repeat-containing protein [Arthrospira maxima CS-328] Length = 728 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 61/167 (36%), Gaps = 32/167 (19%) Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + + LL A Y G+Y QA + + + P V YV + +V Sbjct: 13 SNQSPEVLLHQAETSYLQGEYDQAIAACQRALELKPNWPPV-YV----------TMGNVS 61 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 + + ++ ++ +E N + A + G + K+G+ +A Sbjct: 62 QGRGQIEEAIRCYAKALEFDPN---LPQAHANL--------------GSMFYKQGKLESA 104 Query: 210 IPRFQLVLANYSDAEHAE----EAMARLVEAYVALALMDEAREVVSL 252 I +Q +A D A+ ++ AL + +A ++ SL Sbjct: 105 IDSYQKAIALKPDLTAVYVNLARALRQMGRESEALIVEQKANQIHSL 151 >gi|158339013|ref|YP_001520190.1| pentapeptide repeat-containing serine/threonine kinase [Acaryochloris marina MBIC11017] gi|158309254|gb|ABW30871.1| serine/threonine kinase with pentapeptide repeats [Acaryochloris marina MBIC11017] Length = 699 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 35/252 (13%), Positives = 76/252 (30%), Gaps = 55/252 (21%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 F LT+ I G + S + + + Q + ++ + ++ +A + Sbjct: 377 FTLTLLGGIGYVVAQGLQSAVSPKAITVAEVNRQVQGHL-QQGDQKFAQGDYQRALREYA 435 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESKNVDYVY 134 A + +A +++G + A + I P S + Y Sbjct: 436 A----------AIQKDPENAEAHFNSGITKRRLNDLKGAIAHYTTAIRLKPTSVD---AY 482 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 G+ +++ + + + + A +++ K+ Sbjct: 483 NNRGLVRSELGDKL--------AAIADFTEAIRLNPQH---VQAYNNRGTIYSEVGKKQA 531 Query: 195 EIGRY-------------YLKR-------GEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 I Y Y R G AAI + V+ ++ +A +A Sbjct: 532 AIADYSQAVQIDAQYYEAYFNRGIVQSDLGNTKAAISDYSQVIRL--NSNYA-QAYNNRG 588 Query: 235 EAYVALALMDEA 246 AYV L + +A Sbjct: 589 IAYVNLGNLKKA 600 >gi|148655298|ref|YP_001275503.1| hypothetical protein RoseRS_1146 [Roseiflexus sp. RS-1] gi|148567408|gb|ABQ89553.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1] Length = 1091 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 3/65 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +L+ + ++ +A E + D A + M GK +AA E+ Sbjct: 270 YSLGLLYQERGDYQRAIELLQSAAGDQ---EYALSAHYMLGQAYQELGKLPEAAHEYEQT 326 Query: 121 ITQYP 125 I P Sbjct: 327 IRLLP 331 >gi|332708493|ref|ZP_08428468.1| hypothetical protein LYNGBM3L_26290 [Lyngbya majuscula 3L] gi|332352757|gb|EGJ32322.1| hypothetical protein LYNGBM3L_26290 [Lyngbya majuscula 3L] Length = 294 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 39/115 (33%), Gaps = 20/115 (17%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMS 100 D+ L S + + + ++ NF A F + + ++P+ +A + Sbjct: 9 SDLKLASPQNPEKAKALAQQGEADRLMGNFEAALAKFTDALELNSNYPW-ALAHRGQ--- 64 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPE------SKNVDY-----VYYLVGMSYAQM 144 Y +YQ+A + I P + V Y YY + ++ Sbjct: 65 --TYYQIKRYQEARTDFSRAIDLNPNYLWALAHRGVTYRFMGEAYYTMAVADLDR 117 >gi|148733188|gb|ABR09252.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 39 [Homo sapiens] Length = 1285 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYXSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|326797333|ref|YP_004315153.1| hypothetical protein Marme_4117 [Marinomonas mediterranea MMB-1] gi|326548097|gb|ADZ93317.1| Tetratricopeptide TPR_1 repeat-containing protein [Marinomonas mediterranea MMB-1] Length = 295 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 36/117 (30%), Gaps = 26/117 (22%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYL---DSVTDVRYQREVYEKAVLFLKEQN 72 + ++F ++ + L G Q +D ++ + E + A L Sbjct: 7 THNSFRFGSLTATALLLVMLAGCSSQVIKDGEPVIENAPYEAESAEEALKLAHLLRDNGR 66 Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ----------QAASLGEE 119 + AYE + K L AFV +Y +A +L + Sbjct: 67 YKAAYEVYENMD---------EKGQLEGAFVL----EYASISASFLPPLEAIALFKR 110 >gi|301064193|ref|ZP_07204636.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] gi|300441638|gb|EFK05960.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] Length = 260 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 49/153 (32%), Gaps = 32/153 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRD--FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++L ++ KA + F + + + + A ++ G Y++A E Sbjct: 113 NMGTVYLLMGDWPKAVDCFKKAAENIKYQTPHYAYN---NLGLAYFNMGDYEKAIQNYEM 169 Query: 120 YITQYPESKNV-DY-----VYYLVG------MSYAQMIRDVPYDQRA------------- 154 I Y VY G ++Y + + P D + Sbjct: 170 SIRL--SHSYAFAYVNLAKVYEAKGNLVEAEVNYREAVLYRPRDPQVLLGFAELLIKEDK 227 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 TK + + +I++ S AR + +N Sbjct: 228 TKEAKETLIKIIKEDPRSAAGTEARKLLAKLQN 260 >gi|255646412|gb|ACU23685.1| unknown [Glycine max] Length = 379 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 36/122 (29%), Gaps = 19/122 (15%) Query: 45 DVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSA 101 D + + R ++ KAV + + N +A + P + A ++ + Sbjct: 92 DPSAEITEEQRDAAQLAKSKAVDAMSQGNLDEALAQLTEAILLNPQSAILYATRASI--- 148 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 K A + + P+S Y + GMS A + + Sbjct: 149 --YMKLKKPNAAIRDADTALKINPDSAKG---YKIRGMSRAML--------GLWEEAASD 195 Query: 162 MS 163 Sbjct: 196 FH 197 >gi|224496034|ref|NP_001139026.1| tetratricopeptide repeat protein 31 [Danio rerio] gi|220673219|emb|CAX14395.1| novel protein with a RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (zgc:123010) [Danio rerio] Length = 474 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 46/148 (31%), Gaps = 29/148 (19%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQC-----SRDFPFAGVARKSLL 98 +V S + + EK + F++E +++A F F F Sbjct: 172 EVIGFSEAKTKRSASLVEKGIRFVQEGQYTQAVSLFTEAIKCDPKDYRF-FG-------- 222 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 ++ +Y A + E+ I P+ YY G + + R Sbjct: 223 NRSYCYCCLEQYALALADAEKSIQMAPDWPKG---YYRRGSALMGLKRYS--------EA 271 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGR 186 + M ++++ + A + + Sbjct: 272 EKAMEQVLKLDGDCE---EAVNDLLYCK 296 >gi|206889255|ref|YP_002248681.1| peptidase, M48 family [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741193|gb|ACI20250.1| peptidase, M48 family [Thermodesulfovibrio yellowstonii DSM 11347] Length = 427 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 30/64 (46%), Gaps = 8/64 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--RKSLLMSAFVQYSAGKYQQAASLGEE 119 E+A ++K +N+++A ++ + + A ++L+ + KY +A S + Sbjct: 281 EEAKKYIKSRNYTQALNLLDRAIARY-GSNYAYTYRALVNL-----NLKKYNEAISDADR 334 Query: 120 YITQ 123 I+ Sbjct: 335 AISL 338 >gi|159028018|emb|CAO87978.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 421 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 72/191 (37%), Gaps = 24/191 (12%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 ++ R + + T R + Y++ + +E+N+ A ++ Q P ++ L Sbjct: 62 KEYDRSLSPEIPTFQRSAEDFYQQGWHYAQEKNYQLAIAFYQQAIAINPQ-FW--QAYLQ 118 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 A V Y + +Q S + + P + YY +G+S ++ T+ L Sbjct: 119 RAEVYYHNQQDRQVLSDCRQVLQLKP---DCSQAYYYLGLSRQRL--------GYTQSSL 167 Query: 160 QYMSRIV---ERYTNSPYVKG-ARFYVTVGRNQLAAKEVEIGRYYLKR----GEYVAAIP 211 + + + + Y +G A ++ A K+ +I K+ Y A I Sbjct: 168 EAYGKAIAIDQNNPQFYYQRGLALEELSELPA--ARKDFQIAAKKFKQQGNFRRYHAIIN 225 Query: 212 RFQLVLANYSD 222 + + V +Y Sbjct: 226 KLKYVHKSYRQ 236 >gi|332296032|ref|YP_004437955.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermodesulfobium narugense DSM 14796] gi|332179135|gb|AEE14824.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermodesulfobium narugense DSM 14796] Length = 204 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 32/90 (35%), Gaps = 8/90 (8%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 RE A F ++ + KA ++N + + A + +Y +A Sbjct: 34 SDREYLNAANSFFDKKEYFKAISFYNLAIESN----PKLVDAYFNRANTYFKLHEYDKAV 89 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + I P++ Y G+SY ++ Sbjct: 90 QDFSKVIELNPKN---AEAYEGRGLSYYKL 116 >gi|300727702|ref|ZP_07061088.1| TPR domain protein [Prevotella bryantii B14] gi|299774990|gb|EFI71596.1| TPR domain protein [Prevotella bryantii B14] Length = 246 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 13/123 (10%) Query: 72 NFSKAYEYF-NQCSRDFPFAGVARKSLLM-SAFVQYSAGKYQQAASLGEEYITQ-YPESK 128 ++ A +Y + FA R +A ++ KYQ++ L E+ + Y + Sbjct: 85 DYENAIKYLDEAIPQLDHFAPHERSVYYYCNAESHFNLQKYQESVPLYEKMLELCY--DE 142 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 V Y +G Y Q L Y ++ Y + + + +N Sbjct: 143 EKADVLYHLGFCYMF--------QEDWLLARDYYRMALKYYKKYLNIPEKQARMAQIKNM 194 Query: 189 LAA 191 +A Sbjct: 195 IAG 197 >gi|255075559|ref|XP_002501454.1| predicted protein [Micromonas sp. RCC299] gi|226516718|gb|ACO62712.1| predicted protein [Micromonas sp. RCC299] Length = 524 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 49/164 (29%), Gaps = 18/164 (10%) Query: 42 SSRDVYLDSVTDVRYQ-REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-----RK 95 +S LD ++ + E+ L L + K P A RK Sbjct: 368 ASLSAMLDEARKLKDEGNELLAGGKLALARSKYEKTVRNLEGLRGLDPAEHEAVYDLRRK 427 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + L A +G++ A + E+ + E + + +S+ Sbjct: 428 TTLNLAAALQRSGEHAAAIARLEKLLD---EDPDDAKALWRRSVSFLATHEHA------- 477 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL-AAKEVEIGR 198 +SR E ++ A+ R AA+E + Sbjct: 478 -AARSDLSRCAEIDPSTAEEVRAQLRKVERREIEGAARERAVAE 520 >gi|224086191|ref|XP_002193025.1| PREDICTED: cell division cycle protein 27 isoform 3 [Taeniopygia guttata] Length = 832 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 51/196 (26%), Gaps = 50/196 (25%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 594 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 643 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-------YVKGARFY 181 N +Y +GM Y + Q L + + ++ S V+ A Sbjct: 644 N---AWYGLGMIYYK--------QEKFSLAEMHFQKALDINPQSSVLLCHIGVVQHALKK 692 Query: 182 VTVGRNQLAAKEVEI-----------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 + L K + I +Y +A+ + + Sbjct: 693 SEKALDTL-NKAINIDPKNPLCKFHRASVLFANEKYKSALQELEELKQIVPKESLVY--- 748 Query: 231 ARLVEAYVALALMDEA 246 + + Y L A Sbjct: 749 FLIGKVYKKLGQTHLA 764 >gi|218437184|ref|YP_002375513.1| hypothetical protein PCC7424_0175 [Cyanothece sp. PCC 7424] gi|218169912|gb|ACK68645.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424] Length = 156 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 45/134 (33%), Gaps = 21/134 (15%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASL 116 E+ +A L+ +A Q ++P FA R+++L Y Y+Q+ Sbjct: 42 ELLNRAQFLLEMGQSDQAEATLTQIIHNYPDFAEAWNRRAVL-----YYLQKCYEQSKQD 96 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 E+ I P ++ +G+ A + ++ + ++ Y Sbjct: 97 CEQVIRLNPHHFG---AWHGLGLCQAAL--------GNYTKAIEAFRKALDIQP---YAL 142 Query: 177 GARFYVTVGRNQLA 190 + + ++ Sbjct: 143 INQKLILECTAMMS 156 >gi|110597396|ref|ZP_01385683.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4 [Chlorobium ferrooxidans DSM 13031] gi|110340940|gb|EAT59411.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4 [Chlorobium ferrooxidans DSM 13031] Length = 1055 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 27/223 (12%), Positives = 66/223 (29%), Gaps = 67/223 (30%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP---------FAGVARKSLLMS----- 100 + ++ V+ L++++ KA + F + +P + L + Sbjct: 46 KQADSLHMLGVIALQKKDHRKAVDLFGKAIDIYPRHSAFYNNRGNALYELRQLDAALASF 105 Query: 101 ----------AFVQ-------YSAGKYQQAASLGEEYITQ-YPESKNVDYVYYLVG--MS 140 A Y G+++ A + ++ + Y ++ YY G + Sbjct: 106 DQAIALKPDFADAYVNQGMVLYDQGEFKAALASFDKALDLKY----DLAKAYYYKGNILH 161 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 + D L + + + Y + V +++ E++ Sbjct: 162 HLNQFGD----------ALASFDQAIALKPD--YAEAYANRGLVLKDR---NELD----- 201 Query: 201 LKRGEYVAAIPRFQLVLANYSD--AEHAEEAMARLVEAYVALA 241 AA+ F + D A +A+ L++ Sbjct: 202 -------AALASFGHAIKLQPDLVAPRVNKAITLLLKGNFKEG 237 >gi|323174181|gb|EFZ59809.1| cellulose synthase operon protein C [Escherichia coli LT-68] Length = 932 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 426 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 482 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 483 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 539 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + +V R S V + G+ A ++ + Sbjct: 540 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 593 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 594 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 646 Score = 35.5 bits (81), Expect = 7.9, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 339 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 395 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 396 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 441 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 442 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 490 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 491 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 520 >gi|315608290|ref|ZP_07883280.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] gi|315250071|gb|EFU30070.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] Length = 262 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 8/69 (11%), Positives = 22/69 (31%), Gaps = 4/69 (5%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E A + ++ +A + + + R +G + +A E + Sbjct: 38 ENADAEYTKGDYQQAVKDYEEVLR----SGANADIYYNLGNAYFRLDNITKAILNYERAM 93 Query: 122 TQYPESKNV 130 P + ++ Sbjct: 94 LMQPGNADI 102 >gi|282164146|ref|YP_003356531.1| hypothetical protein MCP_1476 [Methanocella paludicola SANAE] gi|282156460|dbj|BAI61548.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 348 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 17/165 (10%), Positives = 41/165 (24%), Gaps = 37/165 (22%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + +A + + P A A E + P+ + Sbjct: 38 RGQYQEAIKELEAAVKMKPENPEAH---FDLGLAYNMMDDLDNAVKEYNETLRLKPDHLD 94 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP--------------YV 175 ++ ++ A + L ++ + S Y+ Sbjct: 95 A-----MLNLANAYLA------MGNADDALGLFKDMIAKNPESAEVFASFGVALASAGYL 143 Query: 176 KGARFYVTVGRNQLAA------KEVEIGRYYLKRGEYVAAIPRFQ 214 A + +A + + Y+ +GE AI ++ Sbjct: 144 DDAEEM---LKKAIAKDPRSFDGHLFLAGVYMDKGEVDDAIKEYR 185 >gi|154289277|ref|XP_001545282.1| hypothetical protein BC1G_16179 [Botryotinia fuckeliana B05.10] gi|150849721|gb|EDN24914.1| hypothetical protein BC1G_16179 [Botryotinia fuckeliana B05.10] Length = 611 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 28/145 (19%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108 +D + Y ++ +Q + KAYE + Q P + Y Sbjct: 295 SDQSDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 348 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRI 165 +Y+ A I P + V+Y +G Y I D L R Sbjct: 349 QYRDALDAYSRAIRLNP---YISEVWYDLGTLYESCNNQIND----------ALDAYQRA 395 Query: 166 VERYTNSPYVKGARFYVTVGRNQLA 190 E N+ ++ + + + R+ A Sbjct: 396 AELDPNNVHI---KARLQLLRSGQA 417 >gi|149926302|ref|ZP_01914564.1| cellulose synthase operon protein C [Limnobacter sp. MED105] gi|149825120|gb|EDM84332.1| cellulose synthase operon protein C [Limnobacter sp. MED105] Length = 1322 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 3/58 (5%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 YE L+ N + A +YF P AR + A + ++ G+ +A +L + Sbjct: 472 YENGKRELRLGNEAAARQYFEDTVAFNPAYPWAR---VELARLYHAQGRKDEARALID 526 >gi|145235423|ref|XP_001390360.1| import receptor subunit tom-70 [Aspergillus niger CBS 513.88] gi|134058042|emb|CAK38271.1| unnamed protein product [Aspergillus niger] Length = 629 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 20/141 (14%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92 +G + ++ D L + Y +A L F++A + + + R F ++ Sbjct: 389 LGNKDAAADDFELAITHNKDDPDIYYHRAQLHFILGEFAEAAKDYQKSIDLDRTFIYSH- 447 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + QY G A + + + E +V Y YY ++ DQ Sbjct: 448 -----IQLGVTQYKMGSVASAMATFRRSVKNFEEVPDV-YNYY----------GELLLDQ 491 Query: 153 RATKLMLQYMSRIVERYTNSP 173 + ++ + VE S Sbjct: 492 QNFSEAIEKFDKAVEMEKQSK 512 >gi|91202600|emb|CAJ72239.1| hypothetical protein kustd1494 [Candidatus Kuenenia stuttgartiensis] Length = 847 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 61/208 (29%), Gaps = 43/208 (20%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 + KA E + F A + QA S ++ + DY Sbjct: 547 YRKAIEKSQETG----FTRYAT-VHYNMGNAYKKKNQLPQAISSYKKALQI-----KQDY 596 Query: 133 --VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 + +G Y +M + + + + A + V N+ Sbjct: 597 KQAHNNLGKIYFEMEQYDD--------AFEEYNTALAIDPG---FADAHNNLGVLYNKRG 645 Query: 191 AKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR----L 233 E I Y Y G + +F+L + Y A ++A+A L Sbjct: 646 MDEDAIAAYKKAVAADPLNSDAYYNLGNVYESKNQFELAVEAYQSALAIDQALAYAHNNL 705 Query: 234 VEAYVALALMDEA-REVVSLIQER--YP 258 Y ++D+A E I+ YP Sbjct: 706 GALYDKKGILDKAIEEYRQAIKYDPLYP 733 >gi|112983280|ref|NP_001036957.1| Hsc70/Hsp90-organizing protein HOP [Bombyx mori] gi|60592739|dbj|BAD90844.1| Hsc70/Hsp90-organizing protein HOP [Bombyx mori] Length = 541 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 7/71 (9%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAAS 115 ++ +K L QNF +A + + + P + +S A Y+ A Sbjct: 5 EQLKKKGNDALVNQNFDEAIKCYTEAIALDPTNHVLYSNRSA-----AHAKAENYEAALE 59 Query: 116 LGEEYITQYPE 126 E+ ++ +P Sbjct: 60 DAEKTVSLHPN 70 >gi|332711805|ref|ZP_08431736.1| glycosyltransferase [Lyngbya majuscula 3L] gi|332349783|gb|EGJ29392.1| glycosyltransferase [Lyngbya majuscula 3L] Length = 694 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 61/219 (27%), Gaps = 46/219 (21%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +Y +L + + A E+FN P + A SL Q G+ +A Sbjct: 38 PDALYGLGMLAQQVGKYQTAEEFFNTTLLVNPESFKAWFSLGNLRQAQ---GQLSEAVEA 94 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + + P S ++ Q + + + +E N Sbjct: 95 YQRALALQPNS-----------VALYNNFGYALQQQGKWENAIACYQKALEIQPNCAEAD 143 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR-----------FQLVLANYSDAEH 225 + QL+ ++ Y AA+ + +A Y A Sbjct: 144 VNLGNALYAQGQLSQ----------EKQAYYAALNHDLGVTRKIGGDVKTAVAYYQKAIA 193 Query: 226 AEEAMARLVEAYVALA--------LMDEAREVVSLIQER 256 + LV ++ L L D ++++ Sbjct: 194 IQ---PDLVNSHYTLGVALQEQGKLDDAIASYNNVLKLN 229 >gi|239906810|ref|YP_002953551.1| N-acetylmuramoyl-L-alanine amidase family protein [Desulfovibrio magneticus RS-1] gi|239796676|dbj|BAH75665.1| N-acetylmuramoyl-L-alanine amidase family protein [Desulfovibrio magneticus RS-1] Length = 389 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 29/102 (28%), Gaps = 11/102 (10%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + +AV + W R S E+ + L N +KA ++ Sbjct: 7 VLSFLAVAGGLAWLR--------PSALFAASADELAGEGQAELTGGNVAKALVLLHEAES 58 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 P + + + G + A + + PE Sbjct: 59 KDPRND---RVQALLGRAYFQQGDARTALTHFTRAVRLNPED 97 >gi|119357814|ref|YP_912458.1| LemA family protein [Chlorobium phaeobacteroides DSM 266] gi|119355163|gb|ABL66034.1| LemA family protein [Chlorobium phaeobacteroides DSM 266] Length = 195 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 11/110 (10%) Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--VEI 196 +S Q + Q A L + +VERY + A +NQL E + + Sbjct: 89 LSDPQAMTKFQGAQGALSSSLSRLMLVVERYPD----LKANQNFRDLQNQLEGTENRITV 144 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 R Y AA+ F + + ++ + + Y +A Sbjct: 145 A-----RQRYNAAVETFNFSIRQFPNSLTNSLMLKLKAKEYFKADAAAKA 189 >gi|115380266|ref|ZP_01467282.1| TPR-domain containing protein, putative [Stigmatella aurantiaca DW4/3-1] gi|310821105|ref|YP_003953463.1| tpr domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115362721|gb|EAU61940.1| TPR-domain containing protein, putative [Stigmatella aurantiaca DW4/3-1] gi|309394177|gb|ADO71636.1| TPR repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 435 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 28/74 (37%), Gaps = 1/74 (1%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 Q E+Y + LK N+ +A F ++LL A + + AA + Sbjct: 3 QSELYRRGYEQLKAGNYDEAKRLFLAHEEK-AGTASETQALLRQAAASLAKSDLEGAAKV 61 Query: 117 GEEYITQYPESKNV 130 E+ + + P + Sbjct: 62 YEQLLERNPSLPEI 75 >gi|61402475|gb|AAH91822.1| Zgc:110801 [Danio rerio] Length = 162 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 42/142 (29%), Gaps = 21/142 (14%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQA 113 ++ EKA + K++++ A +Y+ + P + +SL Y A Sbjct: 9 SAEKLKEKANDYFKDKDYENAIKYYTEALDLNPTNPIYYSNRSL-----SYLRTECYGYA 63 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + + KN YY S + K L+ +V N Sbjct: 64 LADATRALEL---DKNYLKGYYRRATSNMAL--------GKFKAALKDYETVVRVRPNDK 112 Query: 174 YVKGARFYVTVGRNQLAAKEVE 195 A+ + K E Sbjct: 113 ---DAKMKYQECNKIVKQKAFE 131 >gi|332528870|ref|ZP_08404844.1| cellulose synthase domain-containing protein [Hylemonella gracilis ATCC 19624] gi|332041729|gb|EGI78081.1| cellulose synthase domain-containing protein [Hylemonella gracilis ATCC 19624] Length = 1135 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 70/220 (31%), Gaps = 36/220 (16%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE----VYEKAVLFLKEQNFSKA 76 + AL + +C + G +++ +V D + +E + +A L+ + +A Sbjct: 11 RIALVLAL---LCGVAGQAARAAPGEDPRAVQDAQEAQETHDALLAQARLWQERDRDDRA 67 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 E + R FP + L A+++ AG+ Q A E PE ++ Sbjct: 68 REVLAKLLRVFPDDPDGV-AQL--AYIERRAGQPQAARQGLERLRALSPEHPDIAR---- 120 Query: 137 VGMSYAQMIRDVPYDQRATKLML-------QYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + + V + A L Q ++ + E Y P Sbjct: 121 --LETLFRLDGVDQPRLAQARALARDGQPAQALAVLRELYPVGPPTGDLALEYWKIV--- 175 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 A E+ + A+ ++ Y D A Sbjct: 176 ADTEL----------GWEPALAGLTRLITQYPDTPRYRLA 205 >gi|322705849|gb|EFY97432.1| DNAJ domain containing protein [Metarhizium anisopliae ARSEF 23] Length = 696 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 4/82 (4%) Query: 50 SVTDVRYQREVYEKA-VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 V E Y+ A F K++N++KA E +++ FP + L A + S G Sbjct: 189 PVPTALDDAEAYKAAGNRFFKDKNYTKAIEQYSKAVDLFPDSP---TYLSNRAAARMSNG 245 Query: 109 KYQQAASLGEEYITQYPESKNV 130 +Y A P++ + Sbjct: 246 QYAAALEDCSRAADLDPQNSKI 267 >gi|311267002|ref|XP_003131355.1| PREDICTED: cell division cycle protein 27 homolog, partial [Sus scrofa] Length = 721 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 31/104 (29%), Gaps = 28/104 (26%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 636 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 N +Y +GM Y + Q L + + ++ S Sbjct: 637 N---AWYGLGMIYYK--------QEKFSLAEMHFQKALDINPQS 669 >gi|300726849|ref|ZP_07060279.1| putative tetratricopeptide repeat domain protein [Prevotella bryantii B14] gi|299775962|gb|EFI72542.1| putative tetratricopeptide repeat domain protein [Prevotella bryantii B14] Length = 1086 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 22/50 (44%) Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + + NYSD EH ++ L Y + A + +++ YPQ W Sbjct: 601 LRRITDNYSDYEHLDDVYYHLFLLYSREGQANRANTYIEKLKDDYPQSQW 650 Score = 35.5 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 55/151 (36%), Gaps = 33/151 (21%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVA------------------RKSLLMSAFVQYSAGKY 110 +E ++A Y + D+P + SL + + + A +Y Sbjct: 627 REGQANRANTYIEKLKDDYPQSQWTTLLTDPYYIENAKFGEQIEDSLYAATYEAFKADRY 686 Query: 111 QQ--AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 Q+ A + EY ++P N D ++ GMS TK + M IV++ Sbjct: 687 QEVKANTSISEY--RFPTGANRDKFLFIGGMSKLNS--------GDTKGCISDMKTIVDK 736 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + NS + A + + +++ ++ Sbjct: 737 FANSRLAEMAGMILNGVND---GRKLHGAKF 764 >gi|221106374|ref|XP_002163424.1| PREDICTED: similar to polaris, partial [Hydra magnipapillata] Length = 867 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 78/280 (27%), Gaps = 41/280 (14%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVC-FLVGWERQSSRDVYLDSVTDVRYQREV 60 +A I + + + K +++ FL G QS + + +D + Sbjct: 466 QKDFTKAAQILKKFEKKSSKMQSQAAVNLSFLYFLEGDVAQSDKHAEIAISSDRYNPAAL 525 Query: 61 YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 K N+ KA +Y+ + ++L K+ +A Sbjct: 526 LNKGNAEYYNGNYLKAKDYYAEALNIEASC------TEALHNLGLCYKKMSKFDEALEC- 578 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + N V +G Y + T L++ +++ Sbjct: 579 --FHKLNLVLPNNAEVICQIGQIYEND--------KNTAEALEWYQQLLNIVPTD---CE 625 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR----- 232 V + + K Y Y + I + Y DA+ E+A+ Sbjct: 626 VLRKVAMLYEEDGDKSQAFQYMYEAFRYYPSCIKTLVWLGGYYIDAQFIEKAITYFERAV 685 Query: 233 ------------LVEAYVALALMDEAREVVSLIQERYPQG 260 L Y +A E I +++P+ Sbjct: 686 QVQPLEVRWHLMLATCYRKAGNYTQAMETYKEIHKKFPEN 725 >gi|195441399|ref|XP_002068497.1| GK20387 [Drosophila willistoni] gi|194164582|gb|EDW79483.1| GK20387 [Drosophila willistoni] Length = 1185 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 24/141 (17%) Query: 133 VYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------R 179 Y L+ + + RD +++ + L +++ + + + Sbjct: 601 AYSLIALGNFSLQTLHQPSRDKEKERKHQEKALAIFKQVLRNDCRNIWAANGIGAVLAHK 660 Query: 180 FYVTVGRNQLAA-KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 V R+ A +E + I Y+++ +Y++AI ++ + + + E Sbjct: 661 GCVIEARDIFAQVREATAEFCDVWLNIAHIYVEQKQYISAIQMYENCMKKFFKHNNV-EV 719 Query: 230 MARLVEAYVALALMDEAREVV 250 M L AY+ + EA+ V+ Sbjct: 720 MQYLARAYLRANKLVEAKAVL 740 >gi|329851451|ref|ZP_08266208.1| diguanylate cyclase GGDEF domain protein [Asticcacaulis biprosthecum C19] gi|328840297|gb|EGF89869.1| diguanylate cyclase GGDEF domain protein [Asticcacaulis biprosthecum C19] Length = 595 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 9/81 (11%) Query: 106 SAGKYQQAASLGEEYITQY--PESKNVDYVYYLVGMSYAQMIRDVPYDQRA-TKLMLQYM 162 AG Y + + + D V L+ + +RD D +L Sbjct: 189 KAGDYDLVVADLNRFRRLNEALGHERADIVLELLAL----RLRDAFPDHAVLARLGEDEF 244 Query: 163 SRIVER-YTN-SPYVKGARFY 181 + + +R + S ++ A Sbjct: 245 AVLTQRGFPRVSERMRNALER 265 >gi|330002534|ref|ZP_08304358.1| tetratricopeptide repeat protein [Klebsiella sp. MS 92-3] gi|328537296|gb|EGF63553.1| tetratricopeptide repeat protein [Klebsiella sp. MS 92-3] Length = 389 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 27/189 (14%), Positives = 58/189 (30%), Gaps = 42/189 (22%) Query: 64 AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + +A + F Q DF + + + A +Q A + E + Sbjct: 114 GRDYMAAGLYDRAEDMFKQLVDETDFRLGALQQLLQIYQA-----TSDWQSAIEVAERLV 168 Query: 122 TQ----YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + G I + + ++ + + Sbjct: 169 KLGKEKH------------RG-----EIANFWCELALQQMAANDLDK-----------AM 200 Query: 178 ARFYVTVGRNQL-AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 A ++ A + +GR ++++G+Y A+ + V+ D E E + L Sbjct: 201 ALLRKGAAADRTSARVSIMMGRVWMEKGDYAKAVESLERVID--QDKELVGETLEMLQTC 258 Query: 237 YVALALMDE 245 Y L DE Sbjct: 259 YQQLGKTDE 267 >gi|307297634|ref|ZP_07577440.1| putative transcriptional regulator, Crp/Fnr family [Thermotogales bacterium mesG1.Ag.4.2] gi|306916894|gb|EFN47276.1| putative transcriptional regulator, Crp/Fnr family [Thermotogales bacterium mesG1.Ag.4.2] Length = 335 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 9/67 (13%), Positives = 25/67 (37%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + ++ +Y K + ++ + + A E + + ++R L AF + Sbjct: 107 PPLLFGEKSLYRKGIRLIERKEYPSAQEVLRSYLDQYQNSPLSRPVKLFYAFSCFLNDFL 166 Query: 111 QQAASLG 117 + A + Sbjct: 167 EDALASI 173 >gi|240142327|ref|YP_002966837.1| hypothetical protein MexAM1_META2p0649 [Methylobacterium extorquens AM1] gi|240012271|gb|ACS43496.1| hypothetical protein MexAM1_META2p0649 [Methylobacterium extorquens AM1] Length = 378 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 33/110 (30%), Gaps = 3/110 (2%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K LT+ V F G + + D R +A + + + +A + Sbjct: 50 KNPLTLTVLSTVAFAEGDLQATIDFASQAIGLDSRQSAAYANRASAYRETGRYQEALNDY 109 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 N R P A + L + Y QA + P + V Sbjct: 110 NAALRLNP---YASRVLYQRGLTHFRMTNYDQALIDYKASAALNPRDEEV 156 >gi|225470567|ref|XP_002272662.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 346 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 9/83 (10%), Positives = 29/83 (34%), Gaps = 1/83 (1%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAF 102 V + + +++ + +S+A E+F + P + + A Sbjct: 157 EKVAKEQAERRATAQLMFDLGQRAYGKGTYSRAIEFFEGALTIIPPPTLFGGEIQIWLAM 216 Query: 103 VQYSAGKYQQAASLGEEYITQYP 125 + ++ +L ++ ++P Sbjct: 217 AYEANNRHADCIALYQQLERKHP 239 >gi|221112306|ref|XP_002155948.1| PREDICTED: similar to Neutrophil cytosol factor 2 [Hydra magnipapillata] Length = 568 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 30/104 (28%), Gaps = 18/104 (17%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 AV E A + F ++ + Q AA +E I+ Sbjct: 13 AVSLYDEGKVENAIKSFEALEQNG-------RIKFNIGCSYLKLRDVQSAAKSFKEAISF 65 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 + YY++G+ Q V +Y + +E Sbjct: 66 ---DPLMAIAYYMIGLISCQEKEYVS--------AFEYFQKAIE 98 >gi|124267183|ref|YP_001021187.1| hypothetical protein Mpe_A1994 [Methylibium petroleiphilum PM1] gi|124259958|gb|ABM94952.1| conserved hypothetical transmembrane protein [Methylibium petroleiphilum PM1] Length = 228 Score = 37.8 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 25/59 (42%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++++ + + KA F+ + A ++ L++A Q+ G+ A + E Sbjct: 58 LFDELDKAVIAGDTDKAARVFSDMKDRYGSTAFAGQAGLLAAKAQFEKGQNDAARASLE 116 >gi|291388028|ref|XP_002710545.1| PREDICTED: cardiac junctin [Oryctolagus cuniculus] Length = 786 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 3/43 (6%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 + T+ ++ +V +Y SP + + + LA K Sbjct: 380 RKRGKTEEAMKAFEELVRKYPQSPRARYGKA---QCEDDLAEK 419 >gi|229529557|ref|ZP_04418947.1| GGDEF family protein [Vibrio cholerae 12129(1)] gi|229333331|gb|EEN98817.1| GGDEF family protein [Vibrio cholerae 12129(1)] Length = 519 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100 D+ L + D +Y L + + A +Y N+ + + Sbjct: 67 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 126 Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + G+Y+++ E+ + P + + YV+ +G +Y ++ V DQ Sbjct: 127 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYVELNNFVEGDQ-HLF 184 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L+Y++ + + LA + K +Y AI Sbjct: 185 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 226 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A S++ +AY+ LA + EA + Sbjct: 227 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 254 >gi|126662166|ref|ZP_01733165.1| outer membrane protein, peptidoglycan-associated lipoprotein [Flavobacteria bacterium BAL38] gi|126625545|gb|EAZ96234.1| outer membrane protein, peptidoglycan-associated lipoprotein [Flavobacteria bacterium BAL38] Length = 642 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 48/134 (35%), Gaps = 10/134 (7%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A ++ + A + + ++ + A Y Y +A ++ I Sbjct: 24 KEANEVYEKLGYMNAVSIYIEVDKN---GYGSPDIYKKIADSYYFNANYIEANKWYQKLI 80 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 S+ VDY YY YAQ ++ VP D + L S++ E + + Y Sbjct: 81 K---SSEIVDYEYYYR---YAQTLKTVP-DIEKSNYYLALFSKLKEADSRAKEYDDNTQY 133 Query: 182 VTVGRNQLAAKEVE 195 + + E+ Sbjct: 134 LKQIKTDNGRYEIS 147 >gi|86605263|ref|YP_474026.1| hypothetical protein CYA_0546 [Synechococcus sp. JA-3-3Ab] gi|86553805|gb|ABC98763.1| putative membrane protein [Synechococcus sp. JA-3-3Ab] Length = 702 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 6/67 (8%), Positives = 21/67 (31%), Gaps = 19/67 (28%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-------------SLLMSAFVQYSAG 108 + L++ F +A + + +R+ + + + G Sbjct: 7 QAGREALQQGRFQEAIQLLEA------YLAQSRQRGEAGASDSQALEAQMNLVRAYHQLG 60 Query: 109 KYQQAAS 115 + ++A + Sbjct: 61 ETEKARA 67 >gi|282859506|ref|ZP_06268611.1| tetratricopeptide repeat protein [Prevotella bivia JCVIHMP010] gi|282587734|gb|EFB92934.1| tetratricopeptide repeat protein [Prevotella bivia JCVIHMP010] Length = 221 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 44/135 (32%), Gaps = 16/135 (11%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A +L + ++ A + ++ +P +L A+ G+Y A + Sbjct: 53 KRASWYLLLEKWNSAKDDYDLILAHYPNN---VAALFFRAYANERLGRYGFARQDYNNLL 109 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P +G+ + + ++ ++E+Y S AR Sbjct: 110 KLVPGHFEA-----QLGLILLNQKD------KHYTEAMDGINGLIEQYPTSAVAYAARAG 158 Query: 182 VTVGRNQ--LAAKEV 194 + R LA + Sbjct: 159 MEEERGLLTLAEYDY 173 >gi|265763037|ref|ZP_06091605.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263255645|gb|EEZ26991.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 91 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 11/92 (11%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L + + G + A EE++ P K D YYL+G +Y ++ + Sbjct: 3 QLKTIKELINQGDIENALQALEEFLQTEPVGK--DEAYYLMGNAYRKL--------GDWQ 52 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 L + +E +SP AR V N Sbjct: 53 KALNHYQSAIELNPDSP-ALQARKMVMDILNF 83 >gi|218263597|ref|ZP_03477671.1| hypothetical protein PRABACTJOHN_03360 [Parabacteroides johnsonii DSM 18315] gi|218222607|gb|EEC95257.1| hypothetical protein PRABACTJOHN_03360 [Parabacteroides johnsonii DSM 18315] Length = 667 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 52/164 (31%), Gaps = 29/164 (17%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDFPF--AGVARKS--LL 98 +++ Y E Y + K + + A F++ + +P RK LL Sbjct: 516 EEIHAQREIQKEYAHEYYLMGNECITKAHDLNAAIRSFDKALKLYPEFVDAWVRKGVTLL 575 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 G QA + E + P+S Y G SY Q+ + Sbjct: 576 DL-------GDGFQAVTCLNEAVRLNPKSFK---ARYNRGKSYLQL--------KYYDEA 617 Query: 159 LQYMSRIVERYTN----SPYVKGARFYVTVGRNQLAAKEVEIGR 198 + + V+ Y+ A ++ +LA + +I Sbjct: 618 VSDFMKAVDLKPKHAAAHEYLAEAFLHIGE--EELARQHQDIAD 659 Score = 35.9 bits (82), Expect = 6.2, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 50/162 (30%), Gaps = 31/162 (19%) Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 A + LM A A ++ + YP + VD + G++ + Sbjct: 527 EYAHEYYLMGNECITKAHDLNAAIRSFDKALKLYP--EFVD-AWVRKGVTLLDLGDGF-- 581 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 + ++ V S + N+ G+ YL+ Y A+ Sbjct: 582 ------QAVTCLNEAVRLNPKSFKAR---------YNR--------GKSYLQLKYYDEAV 618 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 F + A E L EA++ + + AR+ + Sbjct: 619 SDFMKAVDLKPKHAAAHE---YLAEAFLHIGEEELARQHQDI 657 >gi|213026513|ref|ZP_03340960.1| hypothetical protein Salmonelentericaenterica_30360 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 200 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A + +GR Y+ RG+Y A+ Q V+ D E E + L Y L E E Sbjct: 25 ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 82 Query: 250 VS 251 + Sbjct: 83 LR 84 >gi|195578109|ref|XP_002078908.1| GD22282 [Drosophila simulans] gi|194190917|gb|EDX04493.1| GD22282 [Drosophila simulans] Length = 1136 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 31/90 (34%), Gaps = 11/90 (12%) Query: 109 KYQQAASLGEEYITQYPESKNVDYV-YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y +A S ++Y+ + ++ Y +G++Y ++ R K ++ ++ Sbjct: 129 EYTEALSAYQKYLRFRENNYWTNHAFMYGIGVAYFKL--------RCFKWAIKSFQELLY 180 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 N + + E I Sbjct: 181 LSPNFTCANEVHLRLGLMLKHCG--EFHIA 208 >gi|220922062|ref|YP_002497363.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060] gi|219946668|gb|ACL57060.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060] Length = 292 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 67/220 (30%), Gaps = 39/220 (17%) Query: 49 DSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQY 105 D + Y + + + ++++A F + + P + + ++L Sbjct: 61 DVIQRNPNDAAAYNTRGAAYARAGSYNEAIADFTKAIQLDPNSASAYSNRAL-----AYR 115 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +G+ A I P + Y +G + Q + +S+ Sbjct: 116 QSGRNDSALQDFTRAINADPNY-SAAY----IGRANLQ------RALGNYEAAYSDLSQA 164 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPR 212 + S AR + R IG + Y RG+ + A + Sbjct: 165 IRLTPESAEAYHAR---GLVRQAQGQHRAAIGDFDAAIDRNPFVNAPYAARGQSLIATNQ 221 Query: 213 FQLVLANYSDAEHA----EEAMARLVEAYVALALMDEARE 248 F + +Y+ A + ++ A AY EA E Sbjct: 222 FDKAIEDYNAALNVNNKDADSWAYRGLAYEKSGRRQEAME 261 >gi|218782714|ref|YP_002434032.1| O-antigen polymerase [Desulfatibacillum alkenivorans AK-01] gi|218764098|gb|ACL06564.1| O-antigen polymerase [Desulfatibacillum alkenivorans AK-01] Length = 762 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 27/70 (38%), Gaps = 8/70 (11%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 +L++Q KA + + +P+ +LL + G+ ++A + + + Sbjct: 593 GRAYLEKQMPEKAAPELEKVIQAYPYH---MNALLNLGVAYGTMGENEKALEVYNKVLQI 649 Query: 124 YPESKNVDYV 133 P DY Sbjct: 650 KP-----DYA 654 >gi|218778990|ref|YP_002430308.1| hypothetical protein Dalk_1137 [Desulfatibacillum alkenivorans AK-01] gi|218760374|gb|ACL02840.1| hypothetical protein Dalk_1137 [Desulfatibacillum alkenivorans AK-01] Length = 777 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 79/219 (36%), Gaps = 33/219 (15%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS-----LLMSAFVQYS--------AG 108 ++A FL + F KA + + + DFP + + +AF + A Sbjct: 436 KQAKEFLAAEEFGKALDSYKKYLADFPGGSQTGAANAKIKEIENAFETFQFEGLKALDAA 495 Query: 109 KYQQAASLGEEYITQYPESKNVDYV----------YYLVGMSYAQMIRDVPYDQRATKLM 158 Q + EY+ +P ++ D V YYL + ++ Q Sbjct: 496 DTDQRIAAYVEYLANHPNGQHKDEVSKLIWEMGDEYYL----FLNRRIELASRQENWAQA 551 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLA-AKEVEI--GRYYLKRGEYVAAIPRFQL 215 ++Y + + ++ K + +LA K E + + +Y AA+ + Sbjct: 552 IEYCDSYIRIF-DNNNAKRLSREKEGFQKRLADQKAFEAVQAKASRRGTDYDAALADYSE 610 Query: 216 VLANYSDAEHAEEAMA--RLVEAYVALALMDEAREVVSL 252 L + ++ + R+++A + +D A+ + L Sbjct: 611 FLTLHPRTTAKDKVLEQIRMLQALKYKSRIDNAQAAMRL 649 >gi|157072494|gb|ABV08791.1| Fleer [Danio rerio] Length = 664 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 5/68 (7%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 +KE + A ++ + +R +L + + Y + AA E+ +PE Sbjct: 32 IKEGRYGDAIHILSKEHQKH---TKSRAALSLLGYCYYHMQDFTNAAECYEQLTQLHPEV 88 Query: 128 KNVDYVYY 135 + DY Y Sbjct: 89 E--DYKLY 94 >gi|194365438|ref|YP_002028048.1| hypothetical protein Smal_1660 [Stenotrophomonas maltophilia R551-3] gi|194348242|gb|ACF51365.1| conserved hypothetical protein [Stenotrophomonas maltophilia R551-3] Length = 212 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 6/90 (6%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 IA+ + GW+ D + Y+KA++ L++ A + Sbjct: 31 VVIAIGAIAGWQW-----YQKDQGGKLASANVEYQKALVGLQQNKLDDASKAVKALEA-G 84 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 P + + L A Q AGK ++A + Sbjct: 85 PSSIYGDLAALQLAKAQVDAGKNEEALATL 114 >gi|154173994|ref|YP_001407448.1| TPR repeat-containing protein [Campylobacter curvus 525.92] gi|112803214|gb|EAU00558.1| tetratricopeptide repeat domain protein [Campylobacter curvus 525.92] Length = 789 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 28/68 (41%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +D Y +Y A +LK+ S A + + + + ++L A Y GK Sbjct: 250 PSDENYAEVLYLIARAYLKDGIASDAKYMLDILMAEHEKSKFTKLAMLDYADYLYRFGKQ 309 Query: 111 QQAASLGE 118 ++A + E Sbjct: 310 KEAMGIYE 317 >gi|39996216|ref|NP_952167.1| TPR domain protein [Geobacter sulfurreducens PCA] gi|39982981|gb|AAR34440.1| TPR domain protein [Geobacter sulfurreducens PCA] Length = 299 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 15/125 (12%), Positives = 40/125 (32%), Gaps = 14/125 (11%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + +L + + +A E P +AR + V ++ + + A + I Sbjct: 189 NLGLAYLGKGDLPQALETLRASVSHNPRNLIARVA---IGRVYFAMDRAEMAIQEYRKAI 245 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 +N +Y + +++ + V + +S + +R Y Sbjct: 246 EINKNYQN---AHYYLALAHVKQKDYV--------AAADAFREAIRIAPDSEKGRLSREY 294 Query: 182 VTVGR 186 + + Sbjct: 295 LDSLK 299 >gi|76666842|emb|CAJ31219.1| protein containing tetratricopeptide repeat [uncultured sulfate-reducing bacterium] Length = 616 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 61/171 (35%), Gaps = 18/171 (10%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE----VYEKAVLFLKEQNFSKA 76 K T+ + +C + + +S S + Q+E ++ + + A Sbjct: 460 KLRSTMLYYRGLCDIGEEKFESGLTELQASEREGPAQQEMGNVLFYSGFCLKELSRYDDA 519 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 + + P +A +LL F Y G++ +A E I P S +DY Sbjct: 520 IPVLKRAAEFDP-GEIAVFNLL--GFCFYKTGRHAEAVGCFERAIGIDPRS-AIDYA--- 572 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 + A+ +R++ ++ + + + N + + +T R+ Sbjct: 573 ---NLARNLREIGR----SEQAIAMYRKALSLDPNIGFARDQLRILTESRD 616 >gi|23011022|ref|ZP_00051516.1| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1] Length = 203 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 16/133 (12%), Positives = 35/133 (26%), Gaps = 18/133 (13%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGK 109 + + ++A + + A E ++ P ++ +R++ L + Sbjct: 78 SGSATADLLSDRARQAMSGNDLPLAVELMDRAVALEPNWSEGWSRRATL-----FWRLSD 132 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 A + + + P G Y V L R Y Sbjct: 133 SASAIADLQRALVLEPRHFEAWAAL---GKLYLAQDDKV--------RALDAFRRAEALY 181 Query: 170 TNSPYVKGARFYV 182 +K A + Sbjct: 182 PQWDMLKKAIERL 194 >gi|327272924|ref|XP_003221234.1| PREDICTED: RNA polymerase II-associated protein 3-like [Anolis carolinensis] Length = 622 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 72/243 (29%), Gaps = 67/243 (27%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 EK + K+ N+ A E + + P+ V + + KY A S + Sbjct: 138 EKGNNYFKQGNYDAAIECYTRGMNADPYNPVLPT---NRSSAFFRLKKYSVAESDCNLAL 194 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS--------- 172 Y G + + + K + +++E N+ Sbjct: 195 ALNKNHTKA-YA--RRGAARFALEK--------FKDAKEDYEKVLELDPNNFEAKNELRK 243 Query: 173 ------------PYVKGARFYVTVGRN-------------QLAAKEVEIGRYYLKRGEYV 207 P A + + +A K++ G Y K G+Y Sbjct: 244 IEQVLMLKENPQPDGGDASKTLDSVKEDVRQIEVEQLKQKAVAEKDL--GNGYFKEGKYE 301 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARL----VEAYVALALMDEARE--VVSLIQERYPQGY 261 AAI Y+ A+ A A L AY+ + EA E +++ Sbjct: 302 AAI-------ECYTRGMAADGANALLPANRAMAYLKIQKYKEAEEDCTKAVLL----DSS 350 Query: 262 WAR 264 +++ Sbjct: 351 YSK 353 >gi|300870173|ref|YP_003785044.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] gi|300687872|gb|ADK30543.1| TPR domain protein [Brachyspira pilosicoli 95/1000] Length = 445 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 24/184 (13%), Positives = 59/184 (32%), Gaps = 29/184 (15%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G +++ + + +Y+ ++ + + A +Y + + + Sbjct: 106 TGNSKKALDEYDYIIKIKNQDYDSLYKAGLISYQSGEWILAQKYLSLAATR---NDSNPE 162 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 L M AF Y Y A E+ I +S S A+ Sbjct: 163 LLYMLAFSYYKMRSYHAAQQNIEKAIAL--DS------------SNYNYHLLYGRILSAS 208 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + + + Y +S ++ ++ ++ +++ Y + G+Y A ++ Sbjct: 209 RDFQNAVKELEISY-DSSFIDN--------KDSIS---LDLANSYYELGDYDKANKYYRE 256 Query: 216 VLAN 219 VL Sbjct: 257 VLTK 260 >gi|296234175|ref|XP_002762304.1| PREDICTED: serine/threonine-protein phosphatase 5 isoform 3 [Callithrix jacchus] Length = 482 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 15/101 (14%) Query: 104 QYSAGKYQQAASLGEEYITQYP------ESKNVDYVYYLVGMSYAQMIRDVPYD---QRA 154 + A Y+ A + I P ++++ YL Y + D + Sbjct: 38 YFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLA---YLRTECYGYALGDATRAIELDKK 94 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + L+ +V+ + A+ + K E Sbjct: 95 FRAALRDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 132 >gi|292623167|ref|XP_001333807.3| PREDICTED: interferon-induced protein with tetratricopeptide repeats 1 [Danio rerio] Length = 435 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 46/160 (28%), Gaps = 21/160 (13%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF--NQCSRDFPFAGVARKSLLMSAF 102 + + + + +Y +K +N + + P L S F Sbjct: 200 KTAAEIDPNDLFLQSLYVLKKSEVKGENVDEEIQSLLEKSIETRNPSG-------LSSIF 252 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY------AQMIRDVPYDQRATK 156 Y ++ GE +P S V L ++ M D + + Sbjct: 253 YYYRNNSTEKGFYEGERVRKHFPTSTKV-----LKIVANLHKWKVYNMKADTEQRENLAR 307 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYV-TVGRNQLAAKEVE 195 ++ ++ Y + VK A + N A E+ Sbjct: 308 KSIELFEELLTHYPDHLKVKLALASLHQYAHNTEKANEIY 347 >gi|167759905|ref|ZP_02432032.1| hypothetical protein CLOSCI_02269 [Clostridium scindens ATCC 35704] gi|167662524|gb|EDS06654.1| hypothetical protein CLOSCI_02269 [Clostridium scindens ATCC 35704] Length = 458 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 24/77 (31%), Gaps = 8/77 (10%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ A + N+ A Q + ++L+ A G QA Sbjct: 360 LFATAQQNFEVANYDSAITNLEQVMKMDEGYNDGA----AMLLLAQSYEKKGDQDQANVK 415 Query: 117 GEEYITQYPESKNVDYV 133 ++ I YP S N Sbjct: 416 YQKIIESYP-STNAAEA 431 >gi|158339577|ref|YP_001520966.1| TPR domain-containing protein [Acaryochloris marina MBIC11017] gi|158309818|gb|ABW31434.1| TPR domain protein [Acaryochloris marina MBIC11017] Length = 161 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 4/75 (5%) Query: 58 REVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 E Y + VLF+ E+NF +A E F Q +R P + A L A Q YQ A Sbjct: 76 SEAYALRGVLFMGEKNFQEAAEDFAQVTRLQPKSAEAH---LNLAKSQLMLKDYQAALQS 132 Query: 117 GEEYITQYPESKNVD 131 + P++++ Sbjct: 133 ATKATQLDPQNQSAA 147 >gi|157785658|ref|NP_001098119.2| tetratricopeptide repeat protein 30A [Danio rerio] gi|189037062|sp|A7YE96|TT30A_DANRE RecName: Full=Tetratricopeptide repeat protein 30A; Short=TPR repeat protein 30A; AltName: Full=Protein fleer gi|190337780|gb|AAI63912.1| Fleer [Danio rerio] Length = 651 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 5/68 (7%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 +KE + A ++ + +R +L + + Y + AA E+ +PE Sbjct: 19 IKEGRYGDAIHILSKEHQKH---TKSRAALSLLGYCYYHMQDFTNAAECYEQLTQLHPEV 75 Query: 128 KNVDYVYY 135 + DY Y Sbjct: 76 E--DYKLY 81 >gi|42527650|ref|NP_972748.1| putative lipoprotein [Treponema denticola ATCC 35405] gi|41818478|gb|AAS12667.1| lipoprotein, putative [Treponema denticola ATCC 35405] Length = 153 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 39/102 (38%), Gaps = 7/102 (6%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + + A+ L + + ++T + E+ ++A L + A EY+ Sbjct: 14 LLILTAAISLLFSCSSLPTDETVPANLTPI----ELNQRAQAELDNGSLRNALEYYKIVI 69 Query: 85 RDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGEEYITQY 124 + + + + + A + S K+ +A + + I +Y Sbjct: 70 KRY-GTDASTRTAAEYEIAHIYISQKKWLEADDMLKAIIDRY 110 >gi|67920757|ref|ZP_00514276.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] gi|67856874|gb|EAM52114.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] Length = 295 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 5/62 (8%), Positives = 20/62 (32%), Gaps = 9/62 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + + ++ + +A + D P + + G+ +A ++ Sbjct: 125 FTLGNAYFQQGKYQQAATALEEGLEIKADVP------SAQFDLGNAYFKLGRMAEAIAVY 178 Query: 118 EE 119 ++ Sbjct: 179 QK 180 >gi|330446673|ref|ZP_08310325.1| type IV pilus biogenesis/stability protein PilW [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490864|dbj|GAA04822.1| type IV pilus biogenesis/stability protein PilW [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 252 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 35/263 (13%), Positives = 78/263 (29%), Gaps = 53/263 (20%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 +++ ++ G D + + + + +LK+ + +A E Sbjct: 5 SVYPLLSCLLFTGCATVEVADNGREFDPKAASEARL-NLGLNYLKDGQWERARENLELAL 63 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV-------------- 130 + P A+ ++ A+ G A + ++ + P++ +V Sbjct: 64 KYDPTYYRAQNAM---AYYYQKVGDKDAAEKMYKQALRYSPKNGDVLNNYGVFLCSEGRY 120 Query: 131 -------------DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 Y YYL+ SY Q + Y + N P Sbjct: 121 DEAIAAFVRAIEQPY-YYLISASYENAGL-CSRKQGNLEAATGYFENALAHDPNRPRSM- 177 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 QLA E+E + R + + +++ L++ Sbjct: 178 ---------LQLAQVEIETNNFKDAR----------VQLFKFNKRYGYTADSLWLLIQLE 218 Query: 238 VALALMDEAREVVSLIQERYPQG 260 + +A + L++E+YP Sbjct: 219 KQAGRLTQANKYAILLKEKYPDS 241 >gi|319954563|ref|YP_004165830.1| tetratricopeptide tpr_1 repeat-containing protein [Cellulophaga algicola DSM 14237] gi|319423223|gb|ADV50332.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga algicola DSM 14237] Length = 710 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 82/230 (35%), Gaps = 43/230 (18%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAG--KYQQAASL 116 Y + FL ++ +S+A + + + P F V + + KY +A + Sbjct: 114 YNE--SFLWDKKYSEAEPLYEELVSENPENFGAV-------LGYANTLSNLKKYSKALVM 164 Query: 117 GEEYITQYPESKNV---------DYV-------YYLVGMSYAQMIRDVPYDQRATKLMLQ 160 I PE+ + Y Y G++Y I + R L L Sbjct: 165 VNRAIALQPENVSAKVSRKYMKLGYANSYVNNQEYQKGINYLNEIFTDFPEDRDALLNLA 224 Query: 161 YMSRIVERYTNSPYVKGARFYVTV-------GRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 + I++ + K + + N +A E IG + AI Sbjct: 225 NVYLIIK---ETEKAKNIYTRLAISPKDSITALNGIALAE-HIGE--NDKEALRVAIQ-A 277 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 + + D + E+ R V+A + +A+E ++L+++RYP+ W Sbjct: 278 KEKVNAIDDTKLKEQTYDRYVQALIWNNKYGKAKEEIALLEKRYPEKNWF 327 >gi|294674568|ref|YP_003575184.1| hypothetical protein PRU_1900 [Prevotella ruminicola 23] gi|294474115|gb|ADE83504.1| tetratricopeptide repeat protein [Prevotella ruminicola 23] Length = 939 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 14/80 (17%) Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 + ++++ + I YL+R + +Y D E+ EA L Y Sbjct: 569 IILKDKMER--LNISERYLRR------------LTTDYPDYENNPEAWYHLWLLYSRQGR 614 Query: 243 MDEAREVVSLIQERYPQGYW 262 EA E ++ ++ YP + Sbjct: 615 TTEAAECLARLKADYPDNEY 634 >gi|293416975|ref|ZP_06659612.1| cellulose synthase operon protein C [Escherichia coli B185] gi|291431551|gb|EFF04536.1| cellulose synthase operon protein C [Escherichia coli B185] Length = 1157 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 78/236 (33%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + + +V R S V + G+ A ++ + Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKSAARSQLAKL 663 Score = 35.9 bits (82), Expect = 6.0, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|255009403|ref|ZP_05281529.1| aerotolerance-related exported protein [Bacteroides fragilis 3_1_12] gi|313147162|ref|ZP_07809355.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313135929|gb|EFR53289.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 278 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 15/122 (12%), Positives = 37/122 (30%), Gaps = 11/122 (9%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSV-------TDVRYQREVYEKAVLFL 68 ++ F L + ++ S++ + DSV + + + + Sbjct: 1 MKKILFFTLGLLVAVTSFGQDSLVTDSTQRMEGDSVNIRNTEFSSSKLEDATKSEGDSAY 60 Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 +F+ A + + R G A Y + +A E + P + Sbjct: 61 IRNDFASAIQIYESLLRK----GDAADVYYNLGNSYYKVNEIAKAILNYERALLLQPGNG 116 Query: 129 NV 130 ++ Sbjct: 117 DI 118 >gi|188587830|ref|YP_001919724.1| TPR-repeat-containing protein [Clostridium botulinum E3 str. Alaska E43] gi|188498111|gb|ACD51247.1| TPR-repeat-containing protein [Clostridium botulinum E3 str. Alaska E43] Length = 423 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 45/122 (36%), Gaps = 9/122 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K + QN+ KA F++ + + + A + +A L E Y Sbjct: 308 YGKGMEEFNIQNYEKANIEFSKAYDYSEGSYLKEHIIFYKAVTLEQLNNFDEAIKLYELY 367 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 ++YP+ D V Y + + + R + + Y +++ + ++ S Y Sbjct: 368 YSEYPKGSYADNVLYNLSLMFNNTDR---------EKSIYYANKLRDDFSESIYFNETIN 418 Query: 181 YV 182 + Sbjct: 419 KI 420 >gi|149921623|ref|ZP_01910073.1| putative disulphide-isomerase [Plesiocystis pacifica SIR-1] gi|149817575|gb|EDM77044.1| putative disulphide-isomerase [Plesiocystis pacifica SIR-1] Length = 408 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 30/89 (33%), Gaps = 8/89 (8%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN--VDYVYYLVGMSYAQMIRDVPYDQR 153 + A A K +++ +L +E + P+++ V Y + + D Sbjct: 207 ARYRLANAYVLAAKREESKALFDELLAADPDNEAGVAAQVLYDRAL-----FSTLKLDGD 261 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + + + RY S + A + Sbjct: 262 PAR-AIAEFQALQARYPESKQARSAYRMI 289 >gi|145345359|ref|XP_001417181.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577408|gb|ABO95474.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1059 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 9/58 (15%), Positives = 22/58 (37%), Gaps = 1/58 (1%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + ++L + + +A + + + F F +L A Y G ++A Sbjct: 722 PDILINQGHVYLAKAQYVQASKLYERAQSQFYFNQ-NENVMLYQARAHYENGNLEEAR 778 >gi|156740280|ref|YP_001430409.1| heat shock protein DnaJ domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156231608|gb|ABU56391.1| heat shock protein DnaJ domain protein [Roseiflexus castenholzii DSM 13941] Length = 451 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 3/49 (6%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 +Q E+Y++A L F +A Q R PF + L A Sbjct: 104 DHQAELYQQARDHLDAGRFVQAIAALRQLHRINPF--YRDSAEL-LADA 149 >gi|117306667|gb|AAI26581.1| DnaJ (Hsp40) homolog, subfamily C, member 3 [Bos taurus] Length = 504 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 39/114 (34%), Gaps = 4/114 (3%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ E A +KE ++ A + + P +S K +A + Sbjct: 269 NKLIESAEELIKEGRYTDAISKYESVMKTEPGVHEYTIRSKERICHCFSKDEKPVEAIRV 328 Query: 117 GEEYITQYPESKNV--DYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 E + P++ N D YL+ Y + I+D Q + Q + + Sbjct: 329 CSEVLQVEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEK 382 >gi|114686935|ref|XP_515200.2| PREDICTED: similar to FLJ20699 protein isoform 3 [Pan troglodytes] gi|114686937|ref|XP_001137018.1| PREDICTED: similar to FLJ20699 protein isoform 1 [Pan troglodytes] Length = 404 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 45/150 (30%), Gaps = 29/150 (19%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYE 78 L+G D LD + +++ AV NF KA E Sbjct: 5 IATGLVLIGTGSSVKLDKELDLAVKTMVEISRTQPLTRREQLHVSAVETFANGNFPKACE 64 Query: 79 YFNQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDY 132 + Q +D P M A + G +Q YP + ++ Sbjct: 65 LWEQILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---IYPFWTPDIPL 113 Query: 133 VYYLVGMSYAQMIRDVPYDQ--RATKLMLQ 160 Y+ G+ ++ YD+ + K L Sbjct: 114 SSYVKGIYSFGLMETNFYDRAEKLAKEALS 143 >gi|254784361|ref|YP_003071789.1| tetratricopeptide repeat domain-containing protein [Teredinibacter turnerae T7901] gi|237687029|gb|ACR14293.1| tetratricopeptide repeat domain protein [Teredinibacter turnerae T7901] Length = 733 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 60/153 (39%), Gaps = 31/153 (20%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 A + +G+Y QA L ++ + + P++ L+ ++Y +D+ + + Sbjct: 436 MAEIHRQSGEYDQAIQLIDQVLAREPDNTPAAR---LLALTY--------HDKNESAKGV 484 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 + + ++R+ ++ + K++ R YL G AI ++ VL Sbjct: 485 RILEDCIQRHP---------------KDFVNYKDL--ARIYLDNGNLEKAITNYKKVLEI 527 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 A+ L +Y L + +AR+ L Sbjct: 528 ---TPQNNAALNNLGISYYFLGELKQARKYFEL 557 >gi|218258388|ref|ZP_03474780.1| hypothetical protein PRABACTJOHN_00435 [Parabacteroides johnsonii DSM 18315] gi|218225515|gb|EEC98165.1| hypothetical protein PRABACTJOHN_00435 [Parabacteroides johnsonii DSM 18315] Length = 1223 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 53/176 (30%), Gaps = 24/176 (13%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 A EE ++P+ ++ YY V Y +R T +++ Sbjct: 627 KLEDIPLATEAFEELERRFPKHSHLLESYYQV---YLMALRSGDQVLATTYK-----NKL 678 Query: 166 VERYTNSPYVKGAR--------FYVTVGRNQL--AAKEVEIGRYYLKRGEYVAAIPRFQL 215 V + S Y + ++ + A + + V ++ Sbjct: 679 VTTFPESDYAIAIADPNYEYNIRMMDKVQDSIYQATYASYLA------EDTVTVRRNYRD 732 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 V A Y A+ + M YV + + + + E+YP ++K Sbjct: 733 VSAKYPLADLLPKFMFLEALTYVQAGDAEGFKNALKALVEKYPTADVTELAGEMLK 788 >gi|158333312|ref|YP_001514484.1| hypothetical protein AM1_0082 [Acaryochloris marina MBIC11017] gi|158303553|gb|ABW25170.1| TPR repeat-containing protein [Acaryochloris marina MBIC11017] Length = 171 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 14/93 (15%) Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 G Y A ++ + P + VYY G++Y + Q L+ S+ + Sbjct: 63 NGDYVHAIQDYDQALQLAPSNSE---VYYNRGVAYF----SINRPQS----ALRDFSQAI 111 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 N + A + R L ++ I Y Sbjct: 112 ALQPN---MAEAYGNRGLIRQTLGDRKGAIADY 141 >gi|146329307|ref|YP_001210054.1| lipoprotein [Dichelobacter nodosus VCS1703A] gi|146232777|gb|ABQ13755.1| conserved hypothetical lipoprotein [Dichelobacter nodosus VCS1703A] Length = 185 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 25/81 (30%), Gaps = 8/81 (9%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y AG + A Y+ + Y +G +Y QR K ++Y+ Sbjct: 91 YRAGDVEAAVKAFRAYLDGGARDEKAVMAQYWLGDAYYS--------QRNFKEAVRYLGT 142 Query: 165 IVERYTNSPYVKGARFYVTVG 185 ++ S A + Sbjct: 143 FLKNKPQSEKTAPALKKLIYA 163 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 23/74 (31%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 YE A+ + + A + F A + YS +++A + Sbjct: 84 YEDALNLYRAGDVEAAVKAFRAYLDGGARDEKAVMAQYWLGDAYYSQRNFKEAVRYLGTF 143 Query: 121 ITQYPESKNVDYVY 134 + P+S+ Sbjct: 144 LKNKPQSEKTAPAL 157 >gi|27777563|gb|AAN10246.1| transcriptional regulator [Streptomyces viridifaciens] Length = 329 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 9/51 (17%), Positives = 18/51 (35%), Gaps = 3/51 (5%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 L + + +A + P+ + LM Y AG+ +A + Sbjct: 226 QLDDGQYDRAIPELRKLLITHPYQERLHQ-QLMV--ALYRAGRQTEALQVY 273 >gi|319794356|ref|YP_004155996.1| hypothetical protein Varpa_3701 [Variovorax paradoxus EPS] gi|315596819|gb|ADU37885.1| Protein of unknown function DUF2133 [Variovorax paradoxus EPS] Length = 230 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 8/61 (13%), Positives = 23/61 (37%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +Y++ + + + F A+++ L++A Y GK +++ + Sbjct: 55 AAALYDEVERSTQSGDVERIQRVLGDMKERFAGTAYAQQAGLLAAKTLYEKGKVEESRAA 114 Query: 117 G 117 Sbjct: 115 L 115 >gi|157964297|ref|YP_001499121.1| hypothetical protein RMA_0318 [Rickettsia massiliae MTU5] gi|157844073|gb|ABV84574.1| hypothetical protein RMA_0318 [Rickettsia massiliae MTU5] Length = 250 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 18/46 (39%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A Y K +A + +I +YP S + Y+ G + + Sbjct: 127 DLALAAYKDNKLTEAKDKFKNFIQKYPNSSLISNAYFWYGECFFKQ 172 Score = 35.5 bits (81), Expect = 8.1, Method: Composition-based stats. Identities = 16/135 (11%), Positives = 45/135 (33%), Gaps = 16/135 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D+ ++ Y+ A+ K+ ++A + F + +P + + + + Y Sbjct: 118 DIAPDKQAYDLALAAYKDNKLTEAKDKFKNFIQKYPNSSLISNAYFWYGECFFKQKDYNG 177 Query: 113 AASLGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 AA Y+ Y P+ + +S ++ + T+ +++ + Sbjct: 178 AAVN---YLKGYKESPKGAKSSDGLLKLALSLGEL--------KKTQEACNMLAKFDNEF 226 Query: 170 TNSPYVKGARFYVTV 184 + A + Sbjct: 227 PTNR--TAASKKMAE 239 >gi|145525386|ref|XP_001448515.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124416059|emb|CAK81118.1| unnamed protein product [Paramecium tetraurelia] Length = 539 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 66/219 (30%), Gaps = 29/219 (13%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + KA+ K + +A + ++Q + P A +A + Sbjct: 249 YFNKAITLNKMNRYEEALKNYDQAIQKDPENSYYYNGK---ADTLQKMNSLDEALENYDL 305 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-NSPY---V 175 I + PE+ Y D + L+ +++ NS Y Sbjct: 306 AIQKNPENSY-----------YYNGKADTLQKMNRFEEALENYDSAIQKNPENSDYYNGK 354 Query: 176 KGARFYVTVGRNQLAAKEVEI------GRYYLKRGEYVAAIPRFQLVLANYSDA--EHAE 227 + L + I RYY + + + RF+ + NY A ++ E Sbjct: 355 ADTLQKMNRFEEALENYDSAIQKNPEDSRYYFNKAITLNNMNRFEEAVENYDSAIQKNPE 414 Query: 228 EAMARLVEA--YVALALMDEA-REVVSLIQERYPQGYWA 263 ++ +A + +EA S Q+ + Sbjct: 415 DSRYYFNKAITLNNMNRFEEALNNYDSATQKNPENSDYY 453 >gi|116496629|gb|AAI26171.1| Prolyl 4-hydroxylase, alpha polypeptide III [Homo sapiens] Length = 544 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 9/80 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQ 111 ++ + ++ A + + F + +L AF + AG Sbjct: 185 FQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFRAGNVS 244 Query: 112 QAASLGEEYITQYPESKNVD 131 A SL E++ P++K + Sbjct: 245 CALSLSREFLLYSPDNKRMA 264 >gi|33589818|ref|NP_878907.1| prolyl 4-hydroxylase subunit alpha-3 precursor [Homo sapiens] gi|114639354|ref|XP_001174896.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-3 [Pan troglodytes] gi|74738714|sp|Q7Z4N8|P4HA3_HUMAN RecName: Full=Prolyl 4-hydroxylase subunit alpha-3; Short=4-PH alpha-3; AltName: Full=Procollagen-proline,2-oxoglutarate-4-dioxygenase subunit alpha-3; Flags: Precursor gi|33188232|gb|AAP97874.1| prolyl 4-hydroxylase alpha III subunit [Homo sapiens] gi|36962719|gb|AAQ87603.1| collagen prolyl 4-hydroxylase alpha III subunit [Homo sapiens] gi|37182165|gb|AAQ88885.1| GPGA711 [Homo sapiens] gi|109658570|gb|AAI17334.1| Prolyl 4-hydroxylase, alpha polypeptide III [Homo sapiens] gi|119595341|gb|EAW74935.1| procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide III, isoform CRA_b [Homo sapiens] Length = 544 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 9/80 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQ 111 ++ + ++ A + + F + +L AF + AG Sbjct: 185 FQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFRAGNVS 244 Query: 112 QAASLGEEYITQYPESKNVD 131 A SL E++ P++K + Sbjct: 245 CALSLSREFLLYSPDNKRMA 264 >gi|307718424|ref|YP_003873956.1| cyclic nucleotide-binding protein [Spirochaeta thermophila DSM 6192] gi|306532149|gb|ADN01683.1| cyclic nucleotide-binding protein [Spirochaeta thermophila DSM 6192] Length = 325 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 49/138 (35%), Gaps = 4/138 (2%) Query: 5 LGRAICIFEAWAY-QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63 LGR + + + + K ALT + G S + + +++ Y + Sbjct: 150 LGRYLAYYPDGVHVEEVKAALTRVQAAQARGGTGALSIPSPE--PRKPSLSSAEKDFY-E 206 Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A ++ + +A F + + V R++L S + +Y + + Sbjct: 207 AESLFGQERYEEALASFTRIAEGSDQEDVRRRALFESGRCLMAMARYDEVIQHYSRFARD 266 Query: 124 YPESKNVDYVYYLVGMSY 141 + ++ +L+ +Y Sbjct: 267 FSDAPETSEALFLIARAY 284 >gi|297672763|ref|XP_002814458.1| PREDICTED: LOW QUALITY PROTEIN: prolyl 3-hydroxylase 2-like [Pongo abelii] Length = 406 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y G+Y +A + Y+ +P+ ++V L + Y + + D D A+ + Sbjct: 310 FAYYRVGEYVKALECAKAYLLCHPDDEDV-----LDNVDYYESLLDDSIDP-ASIEARED 363 Query: 162 MSRIVERY 169 ++ V+R+ Sbjct: 364 LTMFVKRH 371 >gi|298252154|ref|ZP_06975957.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter racemifer DSM 44963] gi|297546746|gb|EFH80614.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter racemifer DSM 44963] Length = 956 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 18/105 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +K + + + + +A + F + + + A KS Y G+Y++A + E+ I Sbjct: 724 DKGDVLYEMRRYQEALDAFEKAAEL--GSQDA-KSYRDRGDALYELGRYREALEMYEQLI 780 Query: 122 TQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 P Y YY G++ + + R + L + Sbjct: 781 RLSPS-----YATGYYNKGLALSALGRH--------QEALDAFEQ 812 >gi|294055224|ref|YP_003548882.1| TPR repeat protein [Coraliomargarita akajimensis DSM 45221] gi|293614557|gb|ADE54712.1| TPR repeat protein [Coraliomargarita akajimensis DSM 45221] Length = 221 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 28/83 (33%), Gaps = 17/83 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGK---------- 109 ++ L+ + ++ +A +F F+ A + + F QY + Sbjct: 43 QQGQLWFRAGDYERAARHFENPRWRG-FSLYAGQDFISAERYFAQYQDAESLLARANALA 101 Query: 110 ----YQQAASLGEEYITQYPESK 128 Y +A E +YP+ Sbjct: 102 HQTNYAEAKHAYAEMARRYPDHP 124 >gi|254295283|ref|YP_003061306.1| hypothetical protein Hbal_2940 [Hirschia baltica ATCC 49814] gi|254043814|gb|ACT60609.1| TPR repeat-containing protein [Hirschia baltica ATCC 49814] Length = 185 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 41/134 (30%), Gaps = 29/134 (21%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 S A + + I P ++ +Y G+ + D YDQ + Sbjct: 73 IDAH-SQDNLALARDMFDRVILIEP---DIAEAWYRRGVVFYL---DGKYDQ-----AIL 120 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 + +E + R AA+ ++ VL + Sbjct: 121 DFEQALELEPRHFEAWLGLAAIFEAVEH--------------RE---AALNAYRQVLKLF 163 Query: 221 SDAEHAEEAMARLV 234 + HA++++ARL Sbjct: 164 PHSRHAKQSVARLE 177 >gi|242620023|ref|YP_003002027.1| conserved hypothetical plastid protein Ycf37 [Aureococcus anophagefferens] gi|239997268|gb|ACS36791.1| conserved hypothetical plastid protein Ycf37 [Aureococcus anophagefferens] Length = 174 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 23/142 (16%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA------- 101 TD +++ L+L+++ ++KA E F C F + L A Sbjct: 44 KKTTDKNTYENLFKLGQLYLRKKIYNKAIEEFRAC-----FKTWDKNDKLGIASLFNTLG 98 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 F Y +Y A + +T P DYV L ++Y Q T + Sbjct: 99 FTYYQLKEYDIAVYYYKIALTVTP-----DYVTSLTNLAYLYQS------QNQTSELQSV 147 Query: 162 MSRIVERYTNSPYVKGARFYVT 183 S+++ +S + + Y+ Sbjct: 148 YSKLILFEPDSKKTRDIQEYLA 169 >gi|255033902|ref|YP_003084523.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254946658|gb|ACT91358.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053] Length = 638 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 58/181 (32%), Gaps = 31/181 (17%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 +++ L F + + S++DV L R R+VY+KA +E+ +A E Sbjct: 1 MHRIILFCF----ALGIFTLQSVSAQDVTL-----SRTARQVYDKAQKAWQERKLPEATE 51 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 F + P + L A V K + + P++ + +G Sbjct: 52 LFEKVLEMEPNSYDTH---LRLAQVYELQRKPDLTRKHYHKAVALRPDAPQSAPAFQWIG 108 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 + R Y + + + A+ + +LA K + Sbjct: 109 RDHFNAQRYDS--------AQFYFEKALPLFP-------AKSSL----GRLAEKSAASAK 149 Query: 199 Y 199 + Sbjct: 150 F 150 >gi|194289640|ref|YP_002005547.1| hypothetical protein RALTA_A1532 [Cupriavidus taiwanensis LMG 19424] gi|193223475|emb|CAQ69480.1| conserved hypothetical protein, Tetratricopeptide TPR_4 motif; putative membrane protein [Cupriavidus taiwanensis LMG 19424] Length = 553 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 31/85 (36%), Gaps = 15/85 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVARKSL----LMSAFVQY-------S 106 ++ ++ +F++A F+ + A+ + SA Y Sbjct: 378 QQGRRAFEQGDFARAATLFDDPMWRGIAQYRAGQYAQAVQSFARVDSAQADYNQGNALAR 437 Query: 107 AGKYQQAASLGEEYITQYPESKNVD 131 G+YQQAA+ + + + P+ Sbjct: 438 QGQYQQAAARYRQALRRQPQWPAAA 462 >gi|15384006|gb|AAK96084.1|AF393466_21 TPR-repeat protein [uncultured crenarchaeote 74A4] Length = 163 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 44/157 (28%), Gaps = 44/157 (28%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP------------FAGVAR------------- 94 + KA L N +A ++ + P F + Sbjct: 7 LLNKAQTSLNLGNPKEALSFYQKILEQDPKHLTALLKKGNIFGKFGKFNDAIMCYDGVIL 66 Query: 95 ------KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 +LL + G+Y A + + ++K Y S + Sbjct: 67 QEKENILALLNKGLCYHKIGQYDVAIECFDIVLKLKSQNKT---ALYNKASSIIKS---- 119 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 K L +S++VE +S Y + A+ + Sbjct: 120 ----GKLKEGLAVLSQLVEL--DSSYKQQAKCDIDFV 150 >gi|15894349|ref|NP_347698.1| TPR repeat-containing protein [Clostridium acetobutylicum ATCC 824] gi|15023976|gb|AAK79038.1|AE007621_12 TPR-repeat-containing protein [Clostridium acetobutylicum ATCC 824] gi|325508477|gb|ADZ20113.1| TPR-repeat-containing protein [Clostridium acetobutylicum EA 2018] Length = 359 Score = 37.8 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 48/137 (35%), Gaps = 19/137 (13%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFV 103 + D +T ++++ E A ++F KA + D+ ++G A+ Sbjct: 129 EERGDDLTVTNKEKKMLELADKKFNNKDFDKAISIYKEMIKNDYYYSGW---VYSSIAYC 185 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A ++ + N D V Y+ G + + + K ++ Sbjct: 186 YDCLENYNEALVYYDKALKN-----NKDSVIYMNKGFALQSLEKH--------KEAIENF 232 Query: 163 SRIVERYTNSP-YVKGA 178 + ++ + YV A Sbjct: 233 DKSIKIKPSKEAYVFKA 249 >gi|301053723|ref|YP_003791934.1| TPR repeat-containing protein [Bacillus anthracis CI] gi|300375892|gb|ADK04796.1| TPR repeat-containing protein [Bacillus cereus biovar anthracis str. CI] Length = 891 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 17/158 (10%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102 + D D Y A + + +A + F Q + + ++ A Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 ++++A + + T+ +++ V YL G ++ + + Sbjct: 651 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKGQLSTATVQ--------LEKAESFF 700 Query: 163 SRIV-ERYTNSPYVKG-ARFYVTVGRNQL---AAKEVE 195 + + NS Y + YV + L A KE+ Sbjct: 701 KEAIMQDSKNSIYTIELSNLYVLWNKTNLIDSAKKEMN 738 >gi|258564825|ref|XP_002583157.1| mitochondrial protein import receptor [Uncinocarpus reesii 1704] gi|237906858|gb|EEP81259.1| mitochondrial protein import receptor [Uncinocarpus reesii 1704] Length = 632 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 46/135 (34%), Gaps = 20/135 (14%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92 +G ++ + L + Y +A L ++A + + + RDF ++ Sbjct: 392 MGNREAAADNFDLALAQNKDDPDIYYHRAQLHFILGELAEAAKDYQKSIDLDRDFIYSH- 450 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + QY G A + + + ++V VY ++ DQ Sbjct: 451 -----IQLGVAQYKMGSVASAMATFRRTLKNF---EDVADVY--------NYYGELLLDQ 494 Query: 153 RATKLMLQYMSRIVE 167 + + ++ R VE Sbjct: 495 QKFEEAIEKFDRAVE 509 >gi|225714516|gb|ACO13104.1| FK506-binding protein 4 [Lepeophtheirus salmonis] Length = 428 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 6/86 (6%) Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + L E+ I YLK E++ A R +++ D+ +A R E Sbjct: 294 DDGNTELEELSKSL---ELNIIMCYLKMKEWLEAKNRCDTFISSNKDS---AKAFFRRGE 347 Query: 236 AYVALALMDEAREVVSLIQERYPQGY 261 A + L+ A++ ++ E P+ Sbjct: 348 ALMGLSDPALAKKDFKMVVELEPENK 373 >gi|157266760|gb|ABV26099.1| fleer splice variant 1 [Danio rerio] Length = 556 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 5/68 (7%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 +KE + A ++ + +R +L + + Y + AA E+ +PE Sbjct: 19 IKEGRYGDAIHILSKEHQKH---TKSRAALSLLGYCYYHMQDFTNAAECYEQLTQLHPEV 75 Query: 128 KNVDYVYY 135 + DY Y Sbjct: 76 E--DYKLY 81 >gi|149919653|ref|ZP_01908132.1| hypothetical protein PPSIR1_07268 [Plesiocystis pacifica SIR-1] gi|149819596|gb|EDM79024.1| hypothetical protein PPSIR1_07268 [Plesiocystis pacifica SIR-1] Length = 276 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 34/88 (38%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 ++ + + + ++ A LK + KA + ++ FP +A + L Sbjct: 171 AKKGTEAEPAKGADSLAVEMQLLGAARSALKAGDVKKALTKLDAHAQRFPRGALATEREL 230 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPE 126 +AG+ +A ++ +I P+ Sbjct: 231 TRVTALCAAGRSDEAETVARRFIATRPQ 258 >gi|91774854|ref|YP_544610.1| tetratricopeptide TPR_2 [Methylobacillus flagellatus KT] gi|91708841|gb|ABE48769.1| Tetratricopeptide TPR_2 [Methylobacillus flagellatus KT] Length = 345 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 11/115 (9%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAAS 115 + ++ K VL + +A + F++ + +P A ++L + G Y++A Sbjct: 58 KALFLKGVLLAESDKQDEAIQVFSELTEKYPQLPAPYNNLAVL---YAY--QGNYEKAKG 112 Query: 116 LGEEYITQYP----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 E I +P +N+ +Y + + K L + ++ Sbjct: 113 ALEAAIRTHPSYATAHENLGDIYARMASESYSRALQLDTSNSRAKSKLALIKDLL 167 >gi|325105362|ref|YP_004275016.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter saltans DSM 12145] gi|324974210|gb|ADY53194.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter saltans DSM 12145] Length = 228 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 47/144 (32%), Gaps = 18/144 (12%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSA 101 + D Y + +L + F KA + ++ + +A +L + Sbjct: 90 EKIIADYANTKSANLAYYYLGIAYLNKGEFQKAADNL----VNYSGSDAVIAPLALGSAG 145 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV--GMSYAQMIRDVPYDQRATKLML 159 +Y A + ++ I++ + YL G+ Y + Q+ K L Sbjct: 146 DAYTELKQYDDAINYYKKAISK--GNNLFAAPIYLKKLGLVYEE--------QKDFKSAL 195 Query: 160 QYMSRIVERYTNSPYVKGARFYVT 183 +I E Y SP Y+ Sbjct: 196 DSYKKIKEDYPQSPVASNIDMYIA 219 >gi|281423681|ref|ZP_06254594.1| putative TPR domain protein [Prevotella oris F0302] gi|281402233|gb|EFB33064.1| putative TPR domain protein [Prevotella oris F0302] Length = 1007 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 39/115 (33%), Gaps = 19/115 (16%) Query: 89 FAGVARKSLLMSAFVQYSAGKYQQ----AASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 F SL ++ ++ G+Y + A + + P N D ++ +S Sbjct: 662 FGKHIEDSLYADSYTAFNEGRYNEVLGNAHVSAKRF----PNGANRDKFLFIAALSKLND 717 Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 K LQ ++ +V Y S A + + A K++ ++ Sbjct: 718 --------GDAKACLQDLNTLVSTYPESQLSVMAGMIINGVK---AGKQLRGAKF 761 >gi|296125556|ref|YP_003632808.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] gi|296017372|gb|ADG70609.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] Length = 208 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 8/70 (11%), Positives = 22/70 (31%), Gaps = 12/70 (17%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQAA 114 +Y A ++++ + Y+++ + + A Y Y + Sbjct: 91 NTLYNLANTLFDLKDYNNSIYYYDKVLELYNNFIYGIY------NKAVSYYYINDYDKC- 143 Query: 115 SLGEEYITQY 124 + +I Y Sbjct: 144 --ADSFIYLY 151 >gi|225619900|ref|YP_002721157.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] gi|225214719|gb|ACN83453.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] Length = 660 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 18/111 (16%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 VY A+ + F +A + FN D F + +Y++A Sbjct: 277 EAVYNMALCKQNLELFEEAIKDFNNIIDSDNIFVYYS------LGICYLELERYEEAIDN 330 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 + +I P+ + Y+ G + D + + + ++ +E Sbjct: 331 FDAFIKLNPDYPD---AYFYRGNAKY--------DLKHYEEAIDDYNKTLE 370 >gi|257058872|ref|YP_003136760.1| hypotheticalprotein [Cyanothece sp. PCC 8802] gi|256589038|gb|ACU99924.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802] Length = 232 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 39/127 (30%), Gaps = 24/127 (18%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFL-------------KEQNFSKAYEY 79 L + +S + + YQ + ++ L + ++ A Sbjct: 5 ALDCCDSRSPEPPPKAATPNCWYQLTLGFQTGHESLSTEQLRTCIKEKADQADYRCAITL 64 Query: 80 FNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 +Q P + + L+ + G Y QA + ++ I P +D Y Sbjct: 65 LDQLILRDPESAIDYNNRGLM-----YFKQGDYDQAINDFDQAIALNP---YLDKAYNNR 116 Query: 138 GMSYAQM 144 A++ Sbjct: 117 ANCQAEL 123 >gi|254412859|ref|ZP_05026632.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196180594|gb|EDX75585.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 435 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 54/153 (35%), Gaps = 21/153 (13%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++E YE+ ++ + A + F Q R P A + ++ G Q A + Sbjct: 2 EQEFYERGREKAQQGDLEGAIQEFEQALRINP--EFAE-AYYRRGLARFDLGDCQSAIAD 58 Query: 117 GEEYITQYPESKNVDYVYYL-VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + PE + YL ++Y Q + L+ ++++ N Sbjct: 59 YSQALRVNPEHLDS----YLGRSLAYLA--------QGEAQASLEDAQQVLQIDGNREAA 106 Query: 176 KG----ARFYVTVGRNQLAAKEVEIGRYYLKRG 204 A + + +A+ + + + YL + Sbjct: 107 YKLQGTAYRRLGKTKEAIASFK-QAAKLYLDQK 138 >gi|219684538|ref|ZP_03539481.1| tetratricopeptide repeat domain protein [Borrelia garinii PBr] gi|219671900|gb|EED28954.1| tetratricopeptide repeat domain protein [Borrelia garinii PBr] Length = 1014 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 60/182 (32%), Gaps = 34/182 (18%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 ++ + ++ K +++ + I P + +Y YL + Sbjct: 808 AIYNLSIAKFENNKLEESLETINKAINLNP--EKSEY-LYLKASINLKNENYPN------ 858 Query: 156 KLMLQYMSRIVERYTN--SPYVKGARFYVTVGRNQLAAKEVE-------------IGRYY 200 + S ++E+ S Y+ A+ Y G A +E +G Y Sbjct: 859 --AISLYSSVIEKNPENTSAYINLAKAYEKSGNKAQAISTLEKIINKNNKLALNNLGILY 916 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS---LIQERY 257 K+ Y AI F+ + N EA L + + A++++ ++ Sbjct: 917 KKQKNYQKAIEIFEKAIKN-----SDIEAKYNLATTLIEINDNTRAKDLLKEYTKLKPNN 971 Query: 258 PQ 259 P+ Sbjct: 972 PE 973 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK +N+ A ++ P + + A +G QA S E+ Sbjct: 843 LYLKASINLKNENYPNAISLYSSVIEKNPEN---TSAYINLAKAYEKSGNKAQAISTLEK 899 Query: 120 YI 121 I Sbjct: 900 II 901 >gi|156348528|ref|XP_001621882.1| hypothetical protein NEMVEDRAFT_v1g143331 [Nematostella vectensis] gi|156208205|gb|EDO29782.1| predicted protein [Nematostella vectensis] Length = 274 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 8/116 (6%) Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKE---VEIGRYYLKRGEYVAAIPRFQLVLA 218 ++ YT S + A + + + +E GR+++K G+ +A Q L Sbjct: 99 FFHLITIYTQSEKTELAEKLFHTMTKRFSQSKTVWIEFGRFFMKTGKPDSARKLLQRGLK 158 Query: 219 NYSDAEHAEEAM-ARLVEAYVALALMDEAREVVSLIQERYPQGY--WARYVETLVK 271 + +H E + L+E + V+ + YP+ W+ Y++ + K Sbjct: 159 SLPTRKHVETIVQFALME--FKNGDPQRGQTVLESVLSNYPKRTDIWSVYIDMMSK 212 >gi|332521376|ref|ZP_08397832.1| ATP-binding region ATPase domain protein [Lacinutrix algicola 5H-3-7-4] gi|332043104|gb|EGI79302.1| ATP-binding region ATPase domain protein [Lacinutrix algicola 5H-3-7-4] Length = 688 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 2/65 (3%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEE 119 A L+LK+++++KA YF + K+ + Y+ AA E Sbjct: 205 NLAQLYLKKEDYNKAIRYFENALNYANGNNLELKAEILPELGGAYIKNENYKIAADNLAE 264 Query: 120 YITQY 124 I Sbjct: 265 AIKLN 269 >gi|303238806|ref|ZP_07325338.1| copper amine oxidase domain protein [Acetivibrio cellulolyticus CD2] gi|302593685|gb|EFL63401.1| copper amine oxidase domain protein [Acetivibrio cellulolyticus CD2] Length = 489 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 39/113 (34%), Gaps = 14/113 (12%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K + TI + + + T E +A + E+NF A EY Sbjct: 11 KLSTTILAVLCIIMSIFCSGL----TVYADDTKSNEASEYITEAYAAINEKNFDLALEYC 66 Query: 81 NQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 N+ F + KS + + KY +A + ++ I +P+ N Sbjct: 67 NKAIGVVSQPIF--YSLKSQI-LIY----QEKYDEALNTLDQAIALFPQYTNA 112 >gi|205363954|gb|ACI04483.1| peptidase C39-like protein [uncultured bacterium RM57] Length = 148 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 9/57 (15%), Positives = 17/57 (29%), Gaps = 3/57 (5%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +A+ ++ + A + + + P Y AGK A E Sbjct: 64 TQALEEMQHGKSADAIATLEKMAAEHPG---QTGVEHDLGLAYYRAGKLVSARHTFE 117 >gi|224086189|ref|XP_002193000.1| PREDICTED: cell division cycle protein 27 isoform 2 [Taeniopygia guttata] Length = 826 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 51/196 (26%), Gaps = 50/196 (25%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 588 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 637 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-------YVKGARFY 181 N +Y +GM Y + Q L + + ++ S V+ A Sbjct: 638 N---AWYGLGMIYYK--------QEKFSLAEMHFQKALDINPQSSVLLCHIGVVQHALKK 686 Query: 182 VTVGRNQLAAKEVEI-----------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 + L K + I +Y +A+ + + Sbjct: 687 SEKALDTL-NKAINIDPKNPLCKFHRASVLFANEKYKSALQELEELKQIVPKESLVY--- 742 Query: 231 ARLVEAYVALALMDEA 246 + + Y L A Sbjct: 743 FLIGKVYKKLGQTHLA 758 >gi|218903327|ref|YP_002451161.1| TPR domain protein [Bacillus cereus AH820] gi|228927271|ref|ZP_04090333.1| TPR repeat-containing protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229121758|ref|ZP_04250979.1| TPR repeat-containing protein [Bacillus cereus 95/8201] gi|254722186|ref|ZP_05183974.1| TPR domain protein [Bacillus anthracis str. A1055] gi|218535541|gb|ACK87939.1| TPR domain protein [Bacillus cereus AH820] gi|228661674|gb|EEL17293.1| TPR repeat-containing protein [Bacillus cereus 95/8201] gi|228832418|gb|EEM77993.1| TPR repeat-containing protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 891 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 17/158 (10%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102 + D D Y A + + +A + F Q + + ++ A Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 ++++A + + T+ +++ V YL G ++ + + Sbjct: 651 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKGQLSTATVQ--------LEKAESFF 700 Query: 163 SRIV-ERYTNSPYVKG-ARFYVTVGRNQL---AAKEVE 195 + + NS Y + YV + L A KE+ Sbjct: 701 KEAIMQDSKNSIYTIELSNLYVLWNKTNLIDSAKKEMN 738 >gi|160890864|ref|ZP_02071867.1| hypothetical protein BACUNI_03309 [Bacteroides uniformis ATCC 8492] gi|156859863|gb|EDO53294.1| hypothetical protein BACUNI_03309 [Bacteroides uniformis ATCC 8492] Length = 256 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 21/65 (32%), Gaps = 15/65 (23%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 ++ K I + A+ + Q + +Y+K ++K + A Sbjct: 2 KMNKLIRLIVLAFALSMPISIWGQCAS---------------IYQKGETYMKRGRYRDAI 46 Query: 78 EYFNQ 82 + F Sbjct: 47 KSFKA 51 >gi|112984520|ref|NP_001037195.1| prolyl 4-hydroxylase alpha subunit [Bombyx mori] gi|37543673|gb|AAM21932.1| prolyl 4-hydroxylase alpha subunit [Bombyx mori] Length = 550 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 51/147 (34%), Gaps = 23/147 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRD------FPFAGVARKSLLMSAFVQYSAGKYQQA 113 YE +++++ A + + +PF L F Y G + A Sbjct: 169 YELGRTLYNDKDYTNALAWMKEALRKYKDENVMYPFTE--VDILEYIGFAYYLNGDVKTA 226 Query: 114 ASLGEEYITQYPESK----NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + ++ P+ N+ +Y + A+ ++ QR + + + Y Sbjct: 227 LEWTQRLLSVDPKHVRARGNIP--HYQK--TIAEQEAELKKQQRG-ETSDEPEEEDGQDY 281 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEI 196 S Y K + Y ++ R E+EI Sbjct: 282 ELSEYAKERKVYESLCRG-----EMEI 303 >gi|2580570|gb|AAC51839.1| ubiquitous TPR motif, X isoform [Homo sapiens] gi|2580572|gb|AAC51840.1| ubiquitous TPR motif, X isoform [Homo sapiens] Length = 1401 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K V + QLA + I Sbjct: 154 QEVLYVDPSFCRAKEIHLRVGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234 >gi|325119616|emb|CBZ55169.1| putative TPR domain-containing protein [Neospora caninum Liverpool] Length = 546 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 3/63 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 A LKE ++S+ E+ P K+LL A +Y++A + Sbjct: 85 NIAAGLLKEGSYSRCIEHCEHVLHVQPGN---EKALLRMAKAHAELQEYKKAEDAIRRLL 141 Query: 122 TQY 124 + Sbjct: 142 KVH 144 >gi|73965114|ref|XP_859939.1| PREDICTED: similar to Cell division cycle protein 27 homolog (CDC27Hs) (H-NUC) isoform 3 [Canis familiaris] Length = 770 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 31/104 (29%), Gaps = 28/104 (26%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 636 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 N +Y +GM Y + Q L + + ++ S Sbjct: 637 N---AWYGLGMIYYK--------QEKFSLAEMHFQKALDINPQS 669 >gi|15808001|ref|NP_285665.1| GGDEF family protein [Deinococcus radiodurans R1] gi|6460735|gb|AAF12440.1|AE001863_65 GGDEF family protein [Deinococcus radiodurans R1] Length = 860 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 4/56 (7%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL----MSAFVQYSAGKYQQA 113 + +++ N+ +A + + R P + R+ L A+ Y AG A Sbjct: 181 NLGISNIEQGNYREAIYWLMEAYRAHPDSNEDRQLELATLTNLAYAHYLAGDLSLA 236 >gi|78045823|ref|YP_361998.1| hypothetical protein XCV0267 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034253|emb|CAJ21898.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 837 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 23/157 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + + D T Y E + A ++F + P +A + Sbjct: 396 SIRQNSPALPDVTTSSLDALRAYALGQQRYSEGKYGAALDFFQKAVDIDPHFALAWLGQV 455 Query: 99 MSAFVQYSAGKYQQAASL---GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 ++ Y++A E++ ++ P + Y+ S+ I D Sbjct: 456 R---AHFANVDYKKATETLRVAEQFKSRLPPRE----ALYVK--SWGVQILDPA------ 500 Query: 156 KLMLQYMSRIVERYTNSPYVK-GARFYVT-VGRNQLA 190 + ++ E Y + Y A + N+ A Sbjct: 501 -QAADFWIQMAELYPD--YAPAQANAAMDLFVANRFA 534 >gi|302817471|ref|XP_002990411.1| hypothetical protein SELMODRAFT_428896 [Selaginella moellendorffii] gi|300141796|gb|EFJ08504.1| hypothetical protein SELMODRAFT_428896 [Selaginella moellendorffii] Length = 685 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 36/112 (32%), Gaps = 17/112 (15%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSA--GKYQQAAS--- 115 + + + + F +A F++ R P + + ++L Q+S Y +A Sbjct: 264 RGQVRVDAKRFEEAVADFDEAIRRQPENYRAYSGRALAFEGLAQWSNAVADYTEALQRGR 323 Query: 116 LGEEYITQYPESKNVDYVYYLVG--MSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y YV G ++ ++ D A+ Q + Sbjct: 324 AATGYRD--------PYVMNSRGNALASLGRYKEALRDYSASFDAFQDAREL 367 >gi|301117386|ref|XP_002906421.1| RNA polymerase-associated protein CTR9 [Phytophthora infestans T30-4] gi|262107770|gb|EEY65822.1| RNA polymerase-associated protein CTR9 [Phytophthora infestans T30-4] Length = 1166 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 26/67 (38%), Gaps = 3/67 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 A +F+ E+ + +A + + ++ + + + LL A Y + + + Sbjct: 791 NLAHIFVAEERYQEAIQLYTVCLTKCYQGQDL--EVLLYLAKAYYESKDFPSCIATLSRA 848 Query: 121 ITQYPES 127 + YP Sbjct: 849 LHMYPND 855 >gi|302422306|ref|XP_003008983.1| mitochondrial precursor proteins import receptor [Verticillium albo-atrum VaMs.102] gi|261352129|gb|EEY14557.1| mitochondrial precursor proteins import receptor [Verticillium albo-atrum VaMs.102] Length = 622 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 47/136 (34%), Gaps = 20/136 (14%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92 +G +++ D + Y +A L + FS A + + + RDF F+ Sbjct: 386 LGAPEKAAEDFEKALEQNADDPDIYYHRAQLHFIKGEFSDAAKDYQKSIDLDRDFIFSH- 444 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + QY G + S+ I + E +V Y YY ++ DQ Sbjct: 445 -----IQLGVTQYKMGSIASSMSIFRRCIKNFKEVPDV-YNYY----------GELLLDQ 488 Query: 153 RATKLMLQYMSRIVER 168 + ++ +E Sbjct: 489 GNFQEAVEKFDTAIEM 504 >gi|167632739|ref|ZP_02391065.1| TPR domain protein [Bacillus anthracis str. A0442] gi|170686617|ref|ZP_02877838.1| TPR domain protein [Bacillus anthracis str. A0465] gi|254684775|ref|ZP_05148635.1| TPR domain protein [Bacillus anthracis str. CNEVA-9066] gi|254743593|ref|ZP_05201278.1| TPR domain protein [Bacillus anthracis str. Kruger B] gi|167531551|gb|EDR94216.1| TPR domain protein [Bacillus anthracis str. A0442] gi|170669693|gb|EDT20435.1| TPR domain protein [Bacillus anthracis str. A0465] Length = 891 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 17/158 (10%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102 + D D Y A + + +A + F Q + + ++ A Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 ++++A + + T+ +++ V YL G ++ + + Sbjct: 651 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKGQLSTATVQ--------LEKAESFF 700 Query: 163 SRIV-ERYTNSPYVKG-ARFYVTVGRNQL---AAKEVE 195 + + NS Y + YV + L A KE+ Sbjct: 701 KEAIMQDSKNSIYTIELSNLYVLWNKTNLIDSAKKEMN 738 >gi|146300345|ref|YP_001194936.1| TPR repeat-containing protein [Flavobacterium johnsoniae UW101] gi|146154763|gb|ABQ05617.1| Tetratricopeptide TPR_2 repeat protein [Flavobacterium johnsoniae UW101] Length = 464 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 28/103 (27%), Gaps = 20/103 (19%) Query: 71 QNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 + + +A F+ +F + + A KY +A I Sbjct: 215 KEYEEAIRAFDYATLIDDEFLG------AFMEKAKAYERLKKYNEAIESYNRTIEL---D 265 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 Y +G Y ++ LQY ++ V Sbjct: 266 DATSYALLRIGKCYEKL--------GNAVKALQYYNQTVHEDP 300 >gi|90409064|ref|ZP_01217189.1| hypothetical protein PCNPT3_10646 [Psychromonas sp. CNPT3] gi|90309821|gb|EAS37981.1| hypothetical protein PCNPT3_10646 [Psychromonas sp. CNPT3] Length = 641 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 17/84 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + A +++++ A E + +F Y KY A S E I Sbjct: 353 QNAYQAYQDKDYKHAAELYE---NNF-----------DKGAALYKNKKYSDALSAFTEVI 398 Query: 122 TQYPESKNVDYVYYLVGMSYAQMI 145 + P + + +Y G S+A++ Sbjct: 399 KKDPNNAH---AFYNQGNSFAKLD 419 >gi|88603325|ref|YP_503503.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] gi|88188787|gb|ABD41784.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] Length = 314 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 7/73 (9%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQA 113 ++ + FL +FS+A F+Q + P + L A Q AG+ +QA Sbjct: 60 TADDLLAEGERFLLNGSFSEATRAFDQVLQADPDSSPGW-----LGLARAQSGAGEQEQA 114 Query: 114 ASLGEEYITQYPE 126 EE++ ++P+ Sbjct: 115 LISLEEFLFRHPD 127 >gi|118349808|ref|XP_001008185.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89289952|gb|EAR87940.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 1242 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 13/115 (11%), Positives = 37/115 (32%), Gaps = 22/115 (19%) Query: 63 KAVLFLKEQNFSKAYEYFNQ-CS----RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 K ++ + +A + F + + + + +A + ++Q +A Sbjct: 862 KGKIYSIRKEHEEAIKNFEKALECDQSQTYLYEELANQ------YLQLKIKD--KALECY 913 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + +I YP + Y++G V + + Y + + + Sbjct: 914 QNFIQAYPYNPQ---ALYMIG------FLLVSLSEDNINKAVSYFEKSIRVQPTN 959 >gi|55981628|ref|YP_144925.1| TPR repeat-containing protein [Thermus thermophilus HB8] gi|55773041|dbj|BAD71482.1| tetratricopeptide repeat family protein [Thermus thermophilus HB8] Length = 453 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 30/81 (37%), Gaps = 7/81 (8%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E+ L E +++A F + R + ++ L G+ ++A ++ Sbjct: 28 ERGERLLSEGAYAEAVAAFEEVLRQD-YGQF--QAHLGLGVALVRLGRLEEARFAFDQMT 84 Query: 122 TQYP----ESKNVDYVYYLVG 138 +P N+ VY +G Sbjct: 85 RVFPDRYEGHFNLGQVYLRLG 105 >gi|332663336|ref|YP_004446124.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332332150|gb|AEE49251.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 665 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 61/184 (33%), Gaps = 39/184 (21%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 ++L F A+C L G + + + ++ + E+ ++KA Sbjct: 3 HKLTLLFFIGFSFFALCGLKG------------QPSSLVMAAQFTKEGDIAFTEKKYNKA 50 Query: 77 YEYFNQC----SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 + + Q AR+ + A G +QQA + + I P+ Y Sbjct: 51 IKLYKQALTISDSLHA----ARRGM---AAAFEQTGNFQQALTAYLKVIEMSPKFSRAVY 103 Query: 133 -----VYY-----LVGMSYAQMIRDVPYDQRATKLMLQY-MSRIVERYTNSPYVKGARFY 181 +YY + ++Y Q + + L + + + E+ S Y++ Sbjct: 104 YEVGQLYYKMGQKMRAVTYFQQFQRLQL-----LDALSFTTNGLHEQNLESGYLEKLPNN 158 Query: 182 VTVG 185 + Sbjct: 159 IRAC 162 >gi|300868026|ref|ZP_07112664.1| Serine/threonine protein kinase with TPR repeats [Oscillatoria sp. PCC 6506] gi|300333946|emb|CBN57842.1| Serine/threonine protein kinase with TPR repeats [Oscillatoria sp. PCC 6506] Length = 702 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 64/223 (28%), Gaps = 38/223 (17%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQ 104 YL ++ + E++ + + +A + A A Sbjct: 321 AYLVNIFNSANATELHTRGNTLYNLNRYEEALAAYNQAIKIK---GDYAE-VWKDKAKAL 376 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ-RATKLMLQYMS 163 Y KY+++ ++ I PE YL + R D+ + + Sbjct: 377 YELKKYKESREACDKAIQLNPE--------YLEAWT----DRGYTLDKLEKYQEAIASFE 424 Query: 164 RIVERYTNSPYVK----GARFYVTVGRNQLAAKEVEIG---RYY----------LKRGEY 206 R +E + P A + +A+ E + +Y +Y Sbjct: 425 RALEIQPDYPEAWKGKGDALLNLQRYEEAIASYEKAVKSQPNFYDAWYSKGIAHQNLKQY 484 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A ++ + SD +A L + L EA E Sbjct: 485 QPAFDAYKQAVELKSDNS---KAWYNLGNVQLELNKNQEAVEA 524 >gi|299469781|emb|CBN76635.1| conserved unknown protein [Ectocarpus siliculosus] Length = 544 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 55/184 (29%), Gaps = 26/184 (14%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S D + + N+ +A E + + A + L A Y Sbjct: 43 SGEDDTLEDTLMWLGYCAFHLGNYQRAIEAYQELESL--GG--ADEVTLFLACCYYYMQM 98 Query: 110 YQQAASLGE---------EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + +A + + + K +D M+Y Q + D DQ + + Sbjct: 99 FDKAEEAAKKGPECALKNR-LLFHVSHKLLDE---NKLMTYHQKLSDTNEDQ-LSLAAIH 153 Query: 161 YMSRIVERYTNSPYVKGARFY-VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 Y+ + + R+ LA V + Y K Y ++ + L Sbjct: 154 YLRS------HFQEATDIYKRLLLENRDDLALN-VYVAMCYYKLDYYDVSLEILAVYLQA 206 Query: 220 YSDA 223 + D+ Sbjct: 207 FPDS 210 >gi|297277412|ref|XP_002801350.1| PREDICTED: serine/threonine-protein phosphatase 5 [Macaca mulatta] Length = 482 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 15/101 (14%) Query: 104 QYSAGKYQQAASLGEEYITQYP------ESKNVDYVYYLVGMSYAQMIRDVPYD---QRA 154 + A Y+ A + I P ++++ YL Y + D + Sbjct: 38 YFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLA---YLRTECYGYALGDATRAIELDKK 94 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 + L+ +V+ + A+ + K E Sbjct: 95 FRAALRDYETVVKVKPHDK---DAKMKYQECNKIVKQKAFE 132 >gi|284097303|ref|ZP_06385439.1| hypothetical protein POR_0026 [Candidatus Poribacteria sp. WGA-A3] gi|283831177|gb|EFC35151.1| hypothetical protein POR_0026 [Candidatus Poribacteria sp. WGA-A3] Length = 637 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 34/109 (31%), Gaps = 20/109 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF---VQYSAGKYQQAASLGE 118 + ++ + + KA E FN+ P + + + G Y +A + Sbjct: 184 NRGRAYINKNDHDKAIEDFNKILEQDP-----ANAEIYL-YRVLAYSLKGDYDKAIADCT 237 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 + + P N + G +Y DQ + L V+ Sbjct: 238 KTLEFKPNYAN---AHLCRGFAYI--------DQGDQEKFLDAFKDFVK 275 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 69/211 (32%), Gaps = 46/211 (21%) Query: 44 RDVYLDSVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 + ++ V D ++E + +KA + ++ + + + A Sbjct: 60 ETLQINVVVDKDIEKEYLKQKAEQLDSDGSWDELIPLCTKIIDL-------EQEPHEKAS 112 Query: 103 VQYSAG-------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + G + A + + + P N Y G++Y + +D Sbjct: 113 AYFKRGIAYRHKGELDLAIADFTQALRLNPAHAN---AYIRRGIAY---DKKGDHDLT-- 164 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + ++++E + N A GR Y+ + ++ AI F Sbjct: 165 ---IADYTKVLELDPD---------------NMFAYH--NRGRAYINKNDHDKAIEDFNK 204 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEA 246 +L D +AE + R V AY D+A Sbjct: 205 ILE--QDPANAEIYLYR-VLAYSLKGDYDKA 232 >gi|284039483|ref|YP_003389413.1| beta-lactamase [Spirosoma linguale DSM 74] gi|283818776|gb|ADB40614.1| beta-lactamase [Spirosoma linguale DSM 74] Length = 496 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 3/76 (3%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + E+ + A + +A E F +P + A G + A Sbjct: 412 PNEDELNDWAYRLMSSGQTKEALELFKLNVDLYPQS-W--NVYDSLAESYERLGNSELAV 468 Query: 115 SLGEEYITQYPESKNV 130 + P++KN Sbjct: 469 KHYNRSLALNPDNKNA 484 >gi|284040468|ref|YP_003390398.1| hypothetical protein Slin_5634 [Spirosoma linguale DSM 74] gi|283819761|gb|ADB41599.1| Tetratricopeptide TPR_2 repeat protein [Spirosoma linguale DSM 74] Length = 231 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 1/85 (1%) Query: 50 SVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 S +D+ Q Y ++++++F +A +Y+ + + P + LL A Sbjct: 133 SSSDLLVQARAYALTGDAYMEKKSFDEAADYYRKAADYKPNKFFSPGYLLKLGVAYEQAK 192 Query: 109 KYQQAASLGEEYITQYPESKNVDYV 133 + +A + E I +Y +S Sbjct: 193 QNDKAIAAYNEIIEKYSQSAEAPTA 217 >gi|169827526|ref|YP_001697684.1| hypothetical protein Bsph_1967 [Lysinibacillus sphaericus C3-41] gi|168992014|gb|ACA39554.1| Hypothetical ypiA protein [Lysinibacillus sphaericus C3-41] Length = 422 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 7/86 (8%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVA 93 G +++ D YL ++ D ++ A + Q + A + + P F+ Sbjct: 185 AGAAYETALDYYLKALEDEVKPDILFGAAYSAFQSQKYEMAIKQLEELKELDPDYFSAY- 243 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEE 119 L+ A + Q+A + +E Sbjct: 244 ----LLLAESYAMTEENQKAYTAIQE 265 >gi|150005799|ref|YP_001300543.1| hypothetical protein BVU_3292 [Bacteroides vulgatus ATCC 8482] gi|212693193|ref|ZP_03301321.1| hypothetical protein BACDOR_02703 [Bacteroides dorei DSM 17855] gi|254882019|ref|ZP_05254729.1| BatE [Bacteroides sp. 4_3_47FAA] gi|294776178|ref|ZP_06741667.1| tetratricopeptide repeat protein [Bacteroides vulgatus PC510] gi|149934223|gb|ABR40921.1| BatE, TRP domain containing protein [Bacteroides vulgatus ATCC 8482] gi|212664298|gb|EEB24870.1| hypothetical protein BACDOR_02703 [Bacteroides dorei DSM 17855] gi|254834812|gb|EET15121.1| BatE [Bacteroides sp. 4_3_47FAA] gi|294450001|gb|EFG18512.1| tetratricopeptide repeat protein [Bacteroides vulgatus PC510] Length = 272 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 13/115 (11%), Positives = 33/115 (28%), Gaps = 6/115 (5%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY---EKAVLFLKEQNFSK 75 + K + F I+ + S V + + + +A +F+ Sbjct: 1 MTKIYFILIFLISFVTVYAQNESDSAQVTAQTEMPQSAAVQTFPTKTEADSAYIRNDFAA 60 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + E + ++ G + Y +A E + P + ++ Sbjct: 61 SVEMYENILKN---EGESSDIYYNLGNSYYKMNNIAKAVLNYERALLLNPGNSDI 112 >gi|153001302|ref|YP_001366983.1| TPR repeat-containing protein [Shewanella baltica OS185] gi|151365920|gb|ABS08920.1| Tetratricopeptide TPR_2 repeat protein [Shewanella baltica OS185] Length = 693 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 14/58 (24%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++A+ + QN++ A + F QY AG Y+QA E+ Sbjct: 363 QQAMQAYQSQNYANAAKQFESPQWR--------------GSAQYKAGDYEQALKTFEQ 406 Score = 35.5 bits (81), Expect = 8.3, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 22/65 (33%), Gaps = 7/65 (10%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRD--FPFAGVARKS 96 + + L + + +Y + ++ KA E + + FP A K+ Sbjct: 393 KAGDYEQALKTFEQDSSAQGLYNQGNALMQLGKPDKAKERYQAALEKQADFP----AAKA 448 Query: 97 LLMSA 101 L A Sbjct: 449 NLELA 453 >gi|332211329|ref|XP_003254773.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-3 [Nomascus leucogenys] Length = 544 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 9/80 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQ 111 ++ + ++ A + + F + +L AF + AG Sbjct: 185 FQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFQAGNVS 244 Query: 112 QAASLGEEYITQYPESKNVD 131 A SL E++ P++K + Sbjct: 245 CALSLSREFLLYSPDNKRMA 264 >gi|330722420|gb|EGH00263.1| TPR repeat protein [gamma proteobacterium IMCC2047] Length = 850 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 80/216 (37%), Gaps = 41/216 (18%) Query: 67 FLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++Q++ + E N R+ +LL+ + GKY+QA E ++ Sbjct: 272 AFQKQDYEASAELANNVLAIDRNHAG------ALLLVGTIAAIEGKYEQAEVSLERFLKL 325 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER--YTNSPYVK----- 176 P+ ++YAQ+ + + L+ + I E+ ++ + Sbjct: 326 VPQHIQA-----RKVLAYAQLNNNRQ------EQALETLHPIAEQEGAPDTQLLALIARA 374 Query: 177 -----GARFYVTVGRNQL----AAKE--VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 A R L A E + + R Y+ + + AI + + +D+E Sbjct: 375 ALRSGEAEQSSLYLRQALESDPANDEVRLALARSYILQRHFDQAIAELKS-IKGSADSEL 433 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + + V+AY+ A + ++++QE P Sbjct: 434 SAQLLV--VQAYMQSQQYQAALKELAVMQENMPDSP 467 Score = 35.9 bits (82), Expect = 6.4, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 15/105 (14%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 KA + ++ A + + Q P V +K + AG+ +A +L E Sbjct: 709 KAEQAMHLKDTQTAIKLYQQLYDKNPNLSVLQK----LVQAHWLAGQQDKALALLEVASQ 764 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +YP N+ +V YL G +Y Q T + R ++ Sbjct: 765 RYP---NLAHVAYLQGTAYQA--------QGNTPKAIGAYRRAIQ 798 >gi|313677805|ref|YP_004055801.1| hypothetical protein Ftrac_3726 [Marivirga tractuosa DSM 4126] gi|312944503|gb|ADR23693.1| hypothetical protein Ftrac_3726 [Marivirga tractuosa DSM 4126] Length = 240 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 7/105 (6%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR----EVYEKAVLFLKEQNFSKAY 77 A +I +I + FL+G + T +R E+Y KA ++ +S+A Sbjct: 89 VAASIILAIGLYFLIGEMSKPQYQEIAQIPTIHLTERSIDGEIYTKAENAFNQEQYSEAI 148 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + F+Q + + +L A G ++A L EE I Sbjct: 149 KMFDQILNEDSQN---QSIMLYKAIAHTENGATEKARMLYEELIQ 190 >gi|302342895|ref|YP_003807424.1| hypothetical protein Deba_1462 [Desulfarculus baarsii DSM 2075] gi|301639508|gb|ADK84830.1| hypothetical protein Deba_1462 [Desulfarculus baarsii DSM 2075] Length = 392 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 51/149 (34%), Gaps = 12/149 (8%) Query: 45 DVYLDSVTDVRYQREVY----EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 + ++ D + E Y E +L +++ F + +P A A + Sbjct: 66 EAIIEQCPDSTHAPEAYWRLAEVYKRYLGLPDYTAIALLFEKYLARYPRAADAPMARRQL 125 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 G+++ A+ + P + D + G+SYAQ + T Sbjct: 126 IEAYEKTGQWEPVAAYFAK--DLGPMDQLPDSRLFQDGLSYAQALEHTGR----TAQAKA 179 Query: 161 YMSRIVERYT--NSPYVKGARFYVTVGRN 187 + +IV R NSP AR + + Sbjct: 180 WYQKIVARDGGANSPAAAKARQRLAALGD 208 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 11/91 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + + I+E+ +S + A + + + YL +Y A Sbjct: 55 PQDYANQRRLLEAIIEQCPDSTHAPEAYWRLAEVYKR-----------YLGLPDYTAIAL 103 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 F+ LA Y A A A +L+EAY Sbjct: 104 LFEKYLARYPRAADAPMARRQLIEAYEKTGQ 134 >gi|293362726|ref|XP_002730231.1| PREDICTED: 4lysine (K)-specific demethylase 6A [Rattus norvegicus] Length = 1236 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 40/140 (28%), Gaps = 42/140 (30%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 +Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 106 EEYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 152 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198 ++ + K + + QL A + I Sbjct: 153 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 212 Query: 199 YYLKRGEYVAAIPRFQLVLA 218 Y + +Y +A ++ +L Sbjct: 213 LYETQRKYHSAKEAYEQLLQ 232 >gi|293350697|ref|XP_002727575.1| PREDICTED: ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome isoform 5 [Rattus norvegicus] Length = 1355 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 40/140 (28%), Gaps = 42/140 (30%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 +Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 106 EEYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 152 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198 ++ + K + + QL A + I Sbjct: 153 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 212 Query: 199 YYLKRGEYVAAIPRFQLVLA 218 Y + +Y +A ++ +L Sbjct: 213 LYETQRKYHSAKEAYEQLLQ 232 >gi|293350695|ref|XP_002727574.1| PREDICTED: ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome isoform 4 [Rattus norvegicus] Length = 1407 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 40/140 (28%), Gaps = 42/140 (30%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 +Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 106 EEYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 152 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198 ++ + K + + QL A + I Sbjct: 153 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 212 Query: 199 YYLKRGEYVAAIPRFQLVLA 218 Y + +Y +A ++ +L Sbjct: 213 LYETQRKYHSAKEAYEQLLQ 232 >gi|293350693|ref|XP_002727573.1| PREDICTED: ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome isoform 3 [Rattus norvegicus] Length = 1423 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 40/140 (28%), Gaps = 42/140 (30%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 +Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 106 EEYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 152 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198 ++ + K + + QL A + I Sbjct: 153 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 212 Query: 199 YYLKRGEYVAAIPRFQLVLA 218 Y + +Y +A ++ +L Sbjct: 213 LYETQRKYHSAKEAYEQLLQ 232 >gi|293350689|ref|XP_002727571.1| PREDICTED: ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome isoform 1 [Rattus norvegicus] Length = 1452 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 40/140 (28%), Gaps = 42/140 (30%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 +Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 106 EEYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 152 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198 ++ + K + + QL A + I Sbjct: 153 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 212 Query: 199 YYLKRGEYVAAIPRFQLVLA 218 Y + +Y +A ++ +L Sbjct: 213 LYETQRKYHSAKEAYEQLLQ 232 >gi|225873567|ref|YP_002755026.1| putative N-acetylmuramoyl-L-alanine amidase [Acidobacterium capsulatum ATCC 51196] gi|225792984|gb|ACO33074.1| putative N-acetylmuramoyl-L-alanine amidase [Acidobacterium capsulatum ATCC 51196] Length = 752 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 54/170 (31%), Gaps = 27/170 (15%) Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY-------PESKNVDYVYYLVG 138 A + L SA Q A +A E + Y P S + Y VG Sbjct: 46 RHRMDAYAEAARLRSALEQKPARDRTEA--EYERVLDAYRVVYHRDPGSMHAAASVYAVG 103 Query: 139 --MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 ++ +D +A++ + + ++Y S Y V + E+E Sbjct: 104 TLLAEYGQ---TFHDPKASRDAIGQYEFLRKQYPGSSY------RVLALLD---EGEIEA 151 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 + R AA + +L L Y + A EA L + A Sbjct: 152 RDLHEDR----AAQTKLKLFLKMYPHSAMANEARYALANLRRDDGQREAA 197 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 11/91 (12%), Positives = 28/91 (30%), Gaps = 7/91 (7%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL--- 116 + E F + A + + +P + +LL + A + + Sbjct: 106 LAEYGQTFHDPKASRDAIGQYEFLRKQYPGSSYRVLALLDEGEI--EARDLHEDRAAQTK 163 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 + ++ YP S + Y ++ + Sbjct: 164 LKLFLKMYPHSAMANEARY--ALANLRRDDG 192 >gi|149044362|gb|EDL97683.1| rCG42878, isoform CRA_b [Rattus norvegicus] Length = 1327 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 40/140 (28%), Gaps = 42/140 (30%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 +Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 106 EEYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 152 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198 ++ + K + + QL A + I Sbjct: 153 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 212 Query: 199 YYLKRGEYVAAIPRFQLVLA 218 Y + +Y +A ++ +L Sbjct: 213 LYETQRKYHSAKEAYEQLLQ 232 >gi|149044361|gb|EDL97682.1| rCG42878, isoform CRA_a [Rattus norvegicus] Length = 1372 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 40/140 (28%), Gaps = 42/140 (30%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 +Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 106 EEYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 152 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198 ++ + K + + QL A + I Sbjct: 153 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 212 Query: 199 YYLKRGEYVAAIPRFQLVLA 218 Y + +Y +A ++ +L Sbjct: 213 LYETQRKYHSAKEAYEQLLQ 232 >gi|170727983|ref|YP_001762009.1| TPR repeat-containing protein [Shewanella woodyi ATCC 51908] gi|169813330|gb|ACA87914.1| Tetratricopeptide TPR_2 repeat protein [Shewanella woodyi ATCC 51908] Length = 729 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 10/72 (13%), Positives = 23/72 (31%), Gaps = 7/72 (9%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF--VQYSAGKYQQAASLGE 118 Y + ++ +++ A +Y + P + + GK A + Sbjct: 636 YGLGLHLIRAKDYLAAEKYLENAATLAP-----QNVQYQYVYLVALDHNGKTTDALDYLK 690 Query: 119 EYITQYPESKNV 130 Y + YP + Sbjct: 691 RYFSSYPAHPQL 702 >gi|293350691|ref|XP_002727572.1| PREDICTED: ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome isoform 2 [Rattus norvegicus] Length = 1400 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 40/140 (28%), Gaps = 42/140 (30%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 +Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 106 EEYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 152 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198 ++ + K + + QL A + I Sbjct: 153 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 212 Query: 199 YYLKRGEYVAAIPRFQLVLA 218 Y + +Y +A ++ +L Sbjct: 213 LYETQRKYHSAKEAYEQLLQ 232 >gi|67458702|ref|YP_246326.1| TPR repeat-containing protein [Rickettsia felis URRWXCal2] gi|67004235|gb|AAY61161.1| Tetratricopeptide repeat domain containing protein [Rickettsia felis URRWXCal2] Length = 706 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 64/185 (34%), Gaps = 36/185 (19%) Query: 55 RYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQ 112 + E+Y K + + + +A + FN+ + P + K Y +Y++ Sbjct: 277 PTEAELYYLKGRCLYELKRYKEAVKEFNKAIKFEPDISSYYYKGQ-----ALYRLKEYKK 331 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A ++ YP+ N Y YY +S ++ R + ++ + ++ +S Sbjct: 332 AIEAYNHALS-YPQYDN--YTYYFKALSLKKLER--------YEEAIEVFNEALKI--DS 378 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRY--------------YLKRGEYVAAIPRFQLVLA 218 + V N+L E I + Y K +A + R++ + Sbjct: 379 KDERTLSAKGQVL-NELMRYEEAIKVFDKAIRIDPKNRNAIYAKGEA-LAKLMRYEEAIK 436 Query: 219 NYSDA 223 + Sbjct: 437 AFDKT 441 Score = 36.6 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 23/127 (18%) Query: 72 NFSKAYE---YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 + +A E + P+ + S+L KY++A I P Sbjct: 227 KYDEAIECCDKIIEIDSLEPYGYFNKGSMLRL------NKKYEEAIEAFNMAINLMPTEA 280 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN---SPYVKGARFYVTVG 185 + YYL G ++ R K ++ ++ ++ + Y A + + Sbjct: 281 EL---YYLKGRCLYELKR--------YKEAVKEFNKAIKFEPDISSYYYKGQALYRLKEY 329 Query: 186 RNQLAAK 192 + + A Sbjct: 330 KKAIEAY 336 >gi|323493531|ref|ZP_08098653.1| hypothetical protein VIBR0546_14460 [Vibrio brasiliensis LMG 20546] gi|323312354|gb|EGA65496.1| hypothetical protein VIBR0546_14460 [Vibrio brasiliensis LMG 20546] Length = 624 Score = 37.8 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 11/84 (13%), Positives = 30/84 (35%), Gaps = 15/84 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGV---------ARKSL--LMSAFVQYS 106 ++A+ + ++++ A E F + A + A Sbjct: 349 QQAMQRYQAKDYTAAAELFEDQKWKGIAQYQAGDFPAAIDSLQGAEQLEDKYNLANAYAQ 408 Query: 107 AGKYQQAASLGEEYITQYPESKNV 130 G+ QAA + ++ + + P+ ++ Sbjct: 409 NGQLDQAAQMYQQILAEKPDHQDA 432 >gi|297578952|ref|ZP_06940880.1| GGDEF family protein [Vibrio cholerae RC385] gi|297536546|gb|EFH75379.1| GGDEF family protein [Vibrio cholerae RC385] Length = 667 Score = 37.8 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100 D+ L + D +Y L + + A +Y N+ + + Sbjct: 215 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 274 Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + G+Y+++ E+ + P + + YV+ +G +Y ++ V DQ Sbjct: 275 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 332 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L+Y++ + + LA + K +Y AI Sbjct: 333 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 374 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A S++ +AY+ LA + EA + Sbjct: 375 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 402 >gi|296217074|ref|XP_002754870.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-3 [Callithrix jacchus] Length = 544 Score = 37.8 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 9/80 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQ 111 ++ + ++ A + + F + +L AF + AG Sbjct: 185 FQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFQAGNVS 244 Query: 112 QAASLGEEYITQYPESKNVD 131 A SL E++ P++K + Sbjct: 245 CALSLSREFLLYSPDNKRMA 264 >gi|325923961|ref|ZP_08185550.1| hypothetical protein containing a divergent form of TPR repeats [Xanthomonas gardneri ATCC 19865] gi|325545544|gb|EGD16809.1| hypothetical protein containing a divergent form of TPR repeats [Xanthomonas gardneri ATCC 19865] Length = 251 Score = 37.8 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 16/131 (12%) Query: 64 AVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A L++ ++++A E + + +L A QY G+ + + I Sbjct: 95 AQTLLEQGDYARAAELYQGALRGIY---QDDPDLMLGLAKAQYGLGQAAETRKTLDALIA 151 Query: 123 QYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-YVKGARF 180 P ++ D ++ Y + D + + L + + Y V+ A+ Sbjct: 152 ANPNYRSHDGHLLYARAV----------EDSGSIEEALHEYETLAQGYPGEEARVRYAQL 201 Query: 181 YVTVGRNQLAA 191 + R Q A Sbjct: 202 LLRAARQQEAK 212 >gi|289804499|ref|ZP_06535128.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 194 Score = 37.8 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A + +GR Y+ RG+Y A+ Q V+ D E E + L Y L E E Sbjct: 19 ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 76 Query: 250 VS 251 + Sbjct: 77 LR 78 >gi|254506313|ref|ZP_05118456.1| type IV pilus biogenesis/stability protein PilW [Vibrio parahaemolyticus 16] gi|219550793|gb|EED27775.1| type IV pilus biogenesis/stability protein PilW [Vibrio parahaemolyticus 16] Length = 236 Score = 37.8 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 40/114 (35%), Gaps = 12/114 (10%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + + + +A C V +QS + R + +L++ N KA E Sbjct: 1 MRSLSFILSLMLAGCVTVDATKQSDPSFNPTERAEARIAL-----GIGYLEQGNMVKARE 55 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQY--SAGKYQQAASLGEEYITQYPESKNV 130 + P ++ L Y G+ Q A + + + Q+P + NV Sbjct: 56 NLEKALDHSP-NYY--RAQLSM--AHYFEKVGETQSAEKMYKTALKQHPRNGNV 104 >gi|205352618|ref|YP_002226419.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272399|emb|CAR37279.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326627683|gb|EGE34026.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 371 Score = 37.8 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A + +GR Y+ RG+Y A+ Q V+ D E E + L Y L E E Sbjct: 196 ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 253 Query: 250 VS 251 + Sbjct: 254 LR 255 >gi|170030859|ref|XP_001843305.1| tetratricopeptide repeat protein 37 [Culex quinquefasciatus] gi|167868424|gb|EDS31807.1| tetratricopeptide repeat protein 37 [Culex quinquefasciatus] Length = 1231 Score = 37.8 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 6/55 (10%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 LK + +S+A E F + + ++ + A + AG+YQ++ + E Sbjct: 968 GQCLLKRKLYSEAVECFQKV------SEATYQATVGKALAYFKAGQYQESYAEYE 1016 >gi|90022221|ref|YP_528048.1| molybdopterin converting factor subunit 1 [Saccharophagus degradans 2-40] gi|89951821|gb|ABD81836.1| peptidase M48, Ste24p [Saccharophagus degradans 2-40] Length = 503 Score = 37.8 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 49/131 (37%), Gaps = 13/131 (9%) Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY---EKAVLF 67 E + K A +++ ++ R + L +Y +A ++ Sbjct: 317 ENELRGNRFSKLAAQYGLVLSLT----RAGKTERALTLAEELVAAEPENIYFTVARADVY 372 Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 ++ +F A + + + P A L A V AG+Y + A L ++ + P Sbjct: 373 AEKGDFETAVKALQEKLKTHP-NHHALNVRL--AEVLMKAGRYNECAELLNRHVQRRPND 429 Query: 128 KNVDYVYYLVG 138 DYV+YL+ Sbjct: 430 ---DYVWYLLA 437 >gi|227111825|ref|ZP_03825481.1| hypothetical protein PcarbP_02612 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 389 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 59/180 (32%), Gaps = 28/180 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ + +A E FNQ + F A + L+ + + A + E+ + Sbjct: 114 GRDYMAAGLYDRAEESFNQLVDEEDFRRSALQ-QLLQI--HQATSDWPTAIEVAEKLVKM 170 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 + VD ++ ++ M D D L + Sbjct: 171 GKDQLRVDIAHFYCELALLAMGSD-DLD-----KALTLL-----------------KKGA 207 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 +Q A + +GR Y+ + +Y A+ + VL D E E + L E Y L Sbjct: 208 TADSQCARASIMMGRIYMAQQDYSRAVESLRQVLE--QDKELVSETLPMLQECYQHLDKP 265 >gi|197362290|ref|YP_002141927.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|207856779|ref|YP_002243430.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|197093767|emb|CAR59241.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|206708582|emb|CAR32903.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261246898|emb|CBG24715.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|301158236|emb|CBW17735.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] Length = 371 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A + +GR Y+ RG+Y A+ Q V+ D E E + L Y L E E Sbjct: 196 ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 253 Query: 250 VS 251 + Sbjct: 254 LR 255 >gi|168703939|ref|ZP_02736216.1| hypothetical protein GobsU_30680 [Gemmata obscuriglobus UQM 2246] Length = 420 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 36/125 (28%), Gaps = 17/125 (13%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A +F+ + P A L M A GK+ A + EY+ P S Sbjct: 173 EAAVAHFDALLKADPQNSWA---LFMRAASNNENGKHDAAIADYTEYLKLSPNSSA---A 226 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 G + I YD ++ + +++ Y N+ E Sbjct: 227 LNNRGTVW---INKKEYD-----KAIEDFTTVLKADP--KYAVAYSNRGHALLNK-KDYE 275 Query: 194 VEIGR 198 + Sbjct: 276 KAVAD 280 >gi|91201134|emb|CAJ74193.1| unknown protein [Candidatus Kuenenia stuttgartiensis] Length = 291 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 3/57 (5%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + K N+ +A E + D + + A QY GKY +A E+ Sbjct: 27 QGNELYKNGNYDQALEKYLNVQVD---SPDVPQLSFNVADTQYKRGKYDEALKSFEK 80 >gi|85860974|ref|YP_463176.1| hypothetical protein SYN_02091 [Syntrophus aciditrophicus SB] gi|85724065|gb|ABC79008.1| hypothetical membrane protein [Syntrophus aciditrophicus SB] Length = 218 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 12/103 (11%), Positives = 35/103 (33%), Gaps = 15/103 (14%) Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQS----------SRDVYLDSVTDVRYQREV 60 + ++ + +F + +C + + + L R++ Sbjct: 30 MKKSGRKKGTLLLRVLFLNFLLCQMAACTTMTELPPERKPTITLQQSLSFPDYSADDRKL 89 Query: 61 YEKAVLFLKE-----QNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +E+ + LK +++KA + F + P + ++ L Sbjct: 90 FEEGLNCLKTIPERLPDYTKARKIFETLVQKHPESKWRIQAEL 132 >gi|325529667|gb|EGD06532.1| hypothetical protein B1M_00937 [Burkholderia sp. TJI49] Length = 422 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 60/216 (27%), Gaps = 65/216 (30%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-----------FAG-VARK 95 + + + + + K N+S A Y+ +P ++ AR Sbjct: 42 VAPTSAQQTAVTLAQHGRTAFKAGNYSLAINYYTAALELYPLVDAFMGRSLAYSAIHARD 101 Query: 96 SLLMSAFV-------------------------QYSAGKYQQAASLGEEYITQYPESKNV 130 A Y + +Y +A ++ E I P + + Sbjct: 102 ESADDAVAAAKIITGTGGNDKLASDLYHLAGLGYYLSDEYDKAIAVYTEAINLAPSNSKI 161 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY--------- 181 Y +Y Q + + L + + + S K + Sbjct: 162 ---YESRADAYKQKLD--------FEHALPDLEKAMALNPKSVSAKDSYAMAFADMGLYQ 210 Query: 182 --VTVGRNQLAAKE------VEIGRYYLKRGEYVAA 209 + LAA + + +G+ Y G+Y AA Sbjct: 211 VAIDKLNESLAADKGSSITYMNLGQVYTSMGKYAAA 246 >gi|300813979|ref|ZP_07094272.1| hypothetical protein HMPREF9131_0889 [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511873|gb|EFK39080.1| hypothetical protein HMPREF9131_0889 [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 523 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 16/73 (21%) Query: 61 YEKAVLFLKE------QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 Y +AV L + +NF+KA E + +L A V Y G A Sbjct: 342 YIEAVKSLNKVIPQDEKNFTKAGEKLEELED----------IILQKAIVFYQKGDKDNAI 391 Query: 115 SLGEEYITQYPES 127 SL + YI P S Sbjct: 392 SLIKSYIQAEPLS 404 >gi|296226568|ref|XP_002807670.1| PREDICTED: LOW QUALITY PROTEIN: aspartyl/asparaginyl beta-hydroxylase-like [Callithrix jacchus] Length = 730 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 23/79 (29%), Gaps = 17/79 (21%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 + + + +V +Y SP + + + LA K +R V Sbjct: 324 RKRGKIEEAMNAFKELVRKYPQSPRARYGKA---QCEDDLAEK---------RRSNEV-- 369 Query: 210 IPRFQLVLANYSDAEHAEE 228 + + Y + + Sbjct: 370 ---LREAIETYQEVASLPD 385 >gi|195339723|ref|XP_002036466.1| GM11868 [Drosophila sechellia] gi|194130346|gb|EDW52389.1| GM11868 [Drosophila sechellia] Length = 1136 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 31/90 (34%), Gaps = 11/90 (12%) Query: 109 KYQQAASLGEEYITQYPESKNVDYV-YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y +A S ++Y+ + ++ Y +G++Y ++ R K ++ ++ Sbjct: 129 EYSEALSAYQKYLRFRENNYWTNHAFMYGIGVAYFKL--------RCFKWAIKSFQELLY 180 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 N + + E I Sbjct: 181 LSPNFTCANEVHLRLGLMLKHCG--EFHIA 208 >gi|159126891|gb|EDP52007.1| TPR domain protein [Aspergillus fumigatus A1163] Length = 748 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +LK ++ AA+ + VLA D++ +E+A+ R +A L E+ E ++ +P Sbjct: 248 FLKTHQFDAALRDLETVLA---DSKPSEKALFRKAQALYHLQRFRESGEAHQVLAREFPS 304 Query: 260 G 260 Sbjct: 305 N 305 >gi|123498307|ref|XP_001327376.1| TPR Domain containing protein [Trichomonas vaginalis G3] gi|121910304|gb|EAY15153.1| TPR Domain containing protein [Trichomonas vaginalis G3] Length = 723 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 35/232 (15%), Positives = 68/232 (29%), Gaps = 39/232 (16%) Query: 33 CFLVGWERQSSRDVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 C + + +RD YL+++ + +Y V+ + +A + F + +R P Sbjct: 408 CLMQSNHEEEARDQYLEAIGVEADCVEALYNLGVVSKMTGQYDEALQVFEKLNRIIP--- 464 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-PY 150 A + + AG A I P+ + + I + Sbjct: 465 KAPEVAFEISDCYEKAGMNVNAIEWLHRLINIQPKDPAI-----------WRRIGAIWDR 513 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 DQ + Q E Y P ++ G Y+ K+ Y A+ Sbjct: 514 DQNES----QAFHCYTESYKFCPSDIDVIQWL--------------GSYFRKKQSYDQAL 555 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGY 261 F+ A + + + + EA ++Q P Sbjct: 556 KFFERAAEL---APKQPRYLMMVASCHRNMDQKQEALAAYEKVMQLD-PNNK 603 >gi|147905822|ref|NP_001086446.1| RNA polymerase-associated protein CTR9 homolog [Xenopus laevis] gi|82249387|sp|Q4QR29|CTR9_XENLA RecName: Full=RNA polymerase-associated protein CTR9 homolog; AltName: Full=SH2 domain-binding protein 1 gi|67677972|gb|AAH97638.1| LOC446236 protein [Xenopus laevis] Length = 1157 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 99/278 (35%), Gaps = 43/278 (15%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 A L RA E + ++T +++A + E S +Y + + + + Y Sbjct: 476 ASLDRAKAEAEHDEHYYNSISVTTSYNLARLYEGLCEFHESEKLYKNILREHPNYVDCYL 535 Query: 63 K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + + NF +A ++F + ++D P + L A ++ E Sbjct: 536 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 589 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSP- 173 + Q P ++N Y +G + Q + D+ R L +++ +S Sbjct: 590 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRN--DSKN 646 Query: 174 ---------------YVKGARFYVTVGRNQLAAKE---VEIGRYYLKRGEYVAAIPRFQL 215 YV+ AR R A + + Y+++ +Y++A+ ++ Sbjct: 647 LFAANGIGAVLAHKGYVREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYEN 706 Query: 216 VLANY---SDAEHAEEAMARLVEAYVALALMDEAREVV 250 L + + E + L A + E ++++ Sbjct: 707 CLRKFYKHQNT----EVLLYLARALFKCGKLQECKQIL 740 >gi|15641379|ref|NP_231011.1| GGDEF family protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121728519|ref|ZP_01681542.1| GGDEF family protein [Vibrio cholerae V52] gi|147674102|ref|YP_001216926.1| GGDEF family protein [Vibrio cholerae O395] gi|153819353|ref|ZP_01972020.1| GGDEF family protein [Vibrio cholerae NCTC 8457] gi|227081538|ref|YP_002810089.1| GGDEF family protein [Vibrio cholerae M66-2] gi|254848489|ref|ZP_05237839.1| GGDEF domain-containing protein [Vibrio cholerae MO10] gi|298498549|ref|ZP_07008356.1| GGDEF family protein [Vibrio cholerae MAK 757] gi|9655861|gb|AAF94525.1| GGDEF family protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121629183|gb|EAX61623.1| GGDEF family protein [Vibrio cholerae V52] gi|126510098|gb|EAZ72692.1| GGDEF family protein [Vibrio cholerae NCTC 8457] gi|146315985|gb|ABQ20524.1| GGDEF family protein [Vibrio cholerae O395] gi|227009426|gb|ACP05638.1| GGDEF family protein [Vibrio cholerae M66-2] gi|227013284|gb|ACP09494.1| GGDEF family protein [Vibrio cholerae O395] gi|254844194|gb|EET22608.1| GGDEF domain-containing protein [Vibrio cholerae MO10] gi|297542882|gb|EFH78932.1| GGDEF family protein [Vibrio cholerae MAK 757] Length = 667 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100 D+ L + D +Y L + + A +Y N+ + + Sbjct: 215 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 274 Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + G+Y+++ E+ + P + + YV+ +G +Y ++ V DQ Sbjct: 275 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 332 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L+Y++ + + LA + K +Y AI Sbjct: 333 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 374 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A S++ +AY+ LA + EA + Sbjct: 375 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 402 >gi|332187373|ref|ZP_08389111.1| tetratricopeptide repeat family protein [Sphingomonas sp. S17] gi|332012534|gb|EGI54601.1| tetratricopeptide repeat family protein [Sphingomonas sp. S17] Length = 316 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 38/100 (38%), Gaps = 9/100 (9%) Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 +A + L + ++A +Y +A + ++ + YP+S+ + L+G SY Sbjct: 187 GDLAEDAYL-YGYRLWTAKRYAEAETQLKKVVADYPKSRRASFAQNLLGRSY-------- 237 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 D L +++ + + Y+ +L Sbjct: 238 LDSGKPSLASMAFYENYKKFPDGERAPDSLLYLGQALTKL 277 Score = 35.5 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 36/108 (33%), Gaps = 2/108 (1%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 T ++A +S +D + + Y + +++A + Sbjct: 158 TPAAAVASGDTATGTPAASGAATVDKPSTGDLAEDAYLYGYRLWTAKRYAEAETQLKKVV 217 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQA-ASLGEEYITQYPESKNVD 131 D+P + A + + +GK A + E Y ++P+ + Sbjct: 218 ADYPKSRRASFAQNLLGRSYLDSGKPSLASMAFYENY-KKFPDGERAP 264 Score = 35.1 bits (80), Expect = 9.6, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 36/101 (35%), Gaps = 14/101 (13%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + ++V Y S + +N L GR YL G+ A F Sbjct: 208 EAETQLKKVVADYPKSR-------RASFAQNLL-------GRSYLDSGKPSLASMAFYEN 253 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 + D E A +++ L +A L +A +V + + Y Sbjct: 254 YKKFPDGERAPDSLLYLGQALTKLNKPADACKVYDELTDVY 294 >gi|327539541|gb|EGF26151.1| conserved hypothetical protein, secreted [Rhodopirellula baltica WH47] Length = 647 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 41/113 (36%), Gaps = 16/113 (14%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK---SLLMSAFVQYSAGKYQQA-ASLGEE 119 A L + A +N +G + + + L A+ +G+ QA + ++ Sbjct: 173 ASGLLDDGQLELAQSTYNMVID----SGDSPQLATARLGLAWCTAMSGEDDQAALTAIDQ 228 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 ++ + E +V + + + DQ + R++ ++ +S Sbjct: 229 FLKHHSEHADVPSALLMQMSCQFRTGQSESADQT--------LERLLTQHADS 273 >gi|327399104|ref|YP_004339973.1| hypothetical protein Hipma_0945 [Hippea maritima DSM 10411] gi|327181733|gb|AEA33914.1| hypothetical protein Hipma_0945 [Hippea maritima DSM 10411] Length = 295 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 14/114 (12%), Positives = 37/114 (32%), Gaps = 19/114 (16%) Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 K + + Y N+ A +++ Y+ + E AI Sbjct: 186 DFKQAELLFCKFINSYKNTDLYDNALYWLAYT--------------YIHQNETGKAIKLL 231 Query: 214 QLVLANYSDAEH-----AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + ++ + + + A+ L++ Y D +L+ +++P + Sbjct: 232 KEIIEQFPNGSVDKGGKTDAAIFALIKIYKKQNEKDLEEYYKNLLIKKFPSSRY 285 >gi|319953175|ref|YP_004164442.1| microtubule-severing atpase [Cellulophaga algicola DSM 14237] gi|319421835|gb|ADV48944.1| Microtubule-severing ATPase [Cellulophaga algicola DSM 14237] Length = 435 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 15/97 (15%) Query: 64 AVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 A L+++ +F A + + A Y GK A L EE Sbjct: 23 AKLYMQNGDFDNAEKQLYGCIDLDSTH------TDAKYELANCFYKQGKTSAAEVLLEE- 75 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 IT+ + YL + Y Q+ +D D + T Sbjct: 76 ITKNSNNIT-----YLELLCYCQLNQDNYNDAQDTYK 107 >gi|325105788|ref|YP_004275442.1| alpha-2-macroglobulin domain protein [Pedobacter saltans DSM 12145] gi|324974636|gb|ADY53620.1| alpha-2-macroglobulin domain protein [Pedobacter saltans DSM 12145] Length = 1940 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 15/85 (17%) Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 QA ++ E QY S + + Y + Y +M +V I+ + Sbjct: 291 QALNIIE---KQYSSSLVIADIRYQKALIYERMQDNVT--------AYALFQDIINLFPE 339 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEI 196 S K A+ V R KE+ I Sbjct: 340 SNTAKNAKVKVFQLR----KKELNI 360 >gi|331685187|ref|ZP_08385773.1| cellulose synthase operon protein C [Escherichia coli H299] gi|331077558|gb|EGI48770.1| cellulose synthase operon protein C [Escherichia coli H299] Length = 1157 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 78/236 (33%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A K+ + +A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALEKQGKWVQAAALQRQRLALAPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + + +V R S V + G+ A ++ + Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 64/210 (30%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSSNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYV--AAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + K+G++V AA+ R +L LA + RL + Sbjct: 459 LQ--NDRLAQQ----AEALEKQGKWVQAAALQRQRLALA--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|53771848|gb|AAU93523.1| ubiquitously transcribed tetratricopeptide repeat protein [Canis lupus familiaris] Length = 1327 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 88 EDYPKALSAYQRYYSL-----QTDYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 134 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 135 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALMDCNPCTLSSVEIQFHIAH 194 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 195 LYETQRKYHSAKEAYEQLLQT 215 >gi|46399087|gb|AAS92205.1| tetratricopeptide repeat protein [Canis lupus familiaris] Length = 1425 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 88 EDYPKALSAYQRYYSL-----QTDYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 134 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 135 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALMDCNPCTLSSVEIQFHIAH 194 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 195 LYETQRKYHSAKEAYEQLLQT 215 >gi|294673477|ref|YP_003574093.1| hypothetical protein PRU_0734 [Prevotella ruminicola 23] gi|294473988|gb|ADE83377.1| tetratricopeptide repeat protein [Prevotella ruminicola 23] Length = 217 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 55/160 (34%), Gaps = 15/160 (9%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYF 80 +F ++ + + S V ++ + E+ +KA + Q + A + + Sbjct: 1 MIAAMFVALGAAAQTPKQWRDSVSVLIEQINLTPNNLELRLKKAEANINLQQYEYARDEY 60 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 + + +L AF Q +Y A + E ++ PE +G++ Sbjct: 61 SAVLKKD---EKNLAALYFRAFCQTQLRQYSFARADYEAFLAIQPEHLEA-----RLGLA 112 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + + D ++R V+ + +S AR Sbjct: 113 HVLQLLGRKTD------AADELNRAVQMFPDSTDAYAARA 146 >gi|255534578|ref|YP_003094949.1| TPR repeat-containing protein [Flavobacteriaceae bacterium 3519-10] gi|255340774|gb|ACU06887.1| TPR repeat-containing protein [Flavobacteriaceae bacterium 3519-10] Length = 569 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 17/123 (13%), Positives = 41/123 (33%), Gaps = 11/123 (8%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + + + ++ A + + +N++ A + + S P A + + Sbjct: 436 EQLKKEVAEKPQDTDALFRLANAYQEAENWNGAILTWQKMSGLLP--DWAP-AYYSQGYA 492 Query: 104 QYSAGKYQQAASLGEEYITQ-YPESKNV-----DYVYYLVGMSYAQMIRDVPYDQRATKL 157 AG + A E++I+ P + Y Y+ ++Y D + Sbjct: 493 YQQAGNSELAKIAYEKFISTVKPADREANKEILSYAYF--AVAYLVKDSDPVKAKNYASQ 550 Query: 158 MLQ 160 +Q Sbjct: 551 SVQ 553 >gi|254286181|ref|ZP_04961141.1| GGDEF family protein [Vibrio cholerae AM-19226] gi|150423850|gb|EDN15791.1| GGDEF family protein [Vibrio cholerae AM-19226] Length = 667 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100 D+ L + D +Y L + + A +Y N+ + + Sbjct: 215 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 274 Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + G+Y+++ E+ + P + + YV+ +G +Y ++ V DQ Sbjct: 275 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 332 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L+Y++ + + LA + K +Y AI Sbjct: 333 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 374 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A S++ +AY+ LA + EA + Sbjct: 375 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 402 >gi|317061865|ref|ZP_07926350.1| conserved hypothetical protein [Fusobacterium sp. D12] gi|313687541|gb|EFS24376.1| conserved hypothetical protein [Fusobacterium sp. D12] Length = 145 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 8/76 (10%) Query: 70 EQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 ++++ A +F + + A+V Y KY++A E+ + P S Sbjct: 11 KKDYDMAVYFFEKLMKLDATNGNWPGF----LAYVYYEQEKYKKAIPYFEKSVDLSPNSP 66 Query: 129 NVDYVYYLVGMSYAQM 144 + Y+L+G SY+++ Sbjct: 67 FI---YFLLGNSYSRL 79 >gi|302785157|ref|XP_002974350.1| hypothetical protein SELMODRAFT_149863 [Selaginella moellendorffii] gi|300157948|gb|EFJ24572.1| hypothetical protein SELMODRAFT_149863 [Selaginella moellendorffii] Length = 1041 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 66/209 (31%), Gaps = 33/209 (15%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 K L L + ++ + ++ F P +LL A Q++ G++Q++ L + + Sbjct: 132 KGQLLLAKGDYEQMFDVFKIVLDVRPDN---LLALLGQACAQFNRGRFQESLGLYKRVLQ 188 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS---------- 172 +P V +G ++ Q R+++ + Sbjct: 189 MHPGCPAS--VRLGLGFCRYRL--------GQLSKARQAFQRVLQLDPENLDALVALGIM 238 Query: 173 -PYVKGARFYVTVGRNQLAAKEV---------EIGRYYLKRGEYVAAIPRFQLVLANYSD 222 A + L A E+ + +Y ++ + LA+ + Sbjct: 239 DINANDAESVQEGTKKMLEAFEIYPYCATALNHLANHYFYTEQHGVVEQLMETALASTDN 298 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVS 251 A ++ L +Y + D+A Sbjct: 299 ALIKSQSYFNLARSYHSKGDYDKAAAYYR 327 >gi|297689698|ref|XP_002822285.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-3-like [Pongo abelii] Length = 544 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 11/81 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQ 111 ++ + ++ A + + F + +L AF + AG Sbjct: 185 FQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFQAGNIS 244 Query: 112 QAASLGEEYITQY-PESKNVD 131 A SL E++ Y P++K + Sbjct: 245 CALSLSREFL-LYSPDNKRMA 264 >gi|253702402|ref|YP_003023591.1| hypothetical protein GM21_3814 [Geobacter sp. M21] gi|251777252|gb|ACT19833.1| TPR repeat-containing protein [Geobacter sp. M21] Length = 615 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 41/108 (37%), Gaps = 7/108 (6%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94 L +++ + + + Y+++ + + + A++ + +P A Sbjct: 441 LTALRQRTEEPQPPAAKDEDLAAEDRYQRSQELVSQGDLDGAFQELKEILLSYP--DFAP 498 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPES----KNVDYVYYLVG 138 + A + Y G +QA + E+ P + KN+ Y++ G Sbjct: 499 -AHNDLAVLAYQQGDKEQARAHYEKAAELAPGNGTFQKNLADFYFVEG 545 >gi|238897412|ref|YP_002923089.1| putative periplasmic protein contains a protein prenylyltransferase domain [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465167|gb|ACQ66941.1| putative periplasmic protein contains a protein prenylyltransferase domain [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 257 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 53/149 (35%), Gaps = 9/149 (6%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 +R + + +++ Y+ A+ F ++++ +A ++ + + Sbjct: 117 NKNRATKVATPESKNNEKKDYDAALFFIFEKKDDDQAIIKLQHFVEEYSESIYRPNAYYW 176 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + Y+ G +A+ + +Y +S VGM + + T Sbjct: 177 LGQLFYNKGMKNKASYYYAVLVKKYHKSPKRPDAMLKVGM--------IMQETGKTDKAK 228 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 Q R++E Y S K A+ + + + Sbjct: 229 QIYQRVIEEYPLSAAKKEAQKKLNAAKKK 257 >gi|168704791|ref|ZP_02737068.1| expressed protein [Gemmata obscuriglobus UQM 2246] Length = 285 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 16/154 (10%), Positives = 41/154 (26%), Gaps = 29/154 (18%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY--- 77 + + F++ C L ++ L ++ + ++++ ++K Sbjct: 2 RLCTAVVFALCACALGAGGQEKKDKEEL---------TKLLGEIKSLMQDRKYAKVIPLA 52 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137 + + P A +A ++ +A ++I PE Sbjct: 53 KKAAELDPTNPGPPFA------AANAHAELRQHAEAVKAWSQFIKLVPEEAKA------- 99 Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 D Q K L ++ Sbjct: 100 ----YDARGDAQLKQGNFKEALADFDEYLKHNPK 129 >gi|162453725|ref|YP_001616092.1| hypothetical protein sce5449 [Sorangium cellulosum 'So ce 56'] gi|161164307|emb|CAN95612.1| hypothetical protein predicted by Glimmer/Critica [Sorangium cellulosum 'So ce 56'] Length = 274 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 27/69 (39%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A L + + + FP + + ++ ++ G +AA LG+ ++ Sbjct: 193 DRARDALTAGDAAGCLAALDAHDSKFPRSAMGEEATVLRIEALIRLGDRARAAELGQRFL 252 Query: 122 TQYPESKNV 130 P S + Sbjct: 253 ASRPTSAHA 261 >gi|152980764|ref|YP_001354355.1| tetratricopeptide repeat protein [Janthinobacterium sp. Marseille] gi|151280841|gb|ABR89251.1| N-acetylglucosaminyl transferase [Janthinobacterium sp. Marseille] Length = 391 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 YE +L +A E FNQ + AR++LL ++++A Sbjct: 112 YELGQDYLNAGLLDRAEETFNQLVDTQ-YGAQARRALLEI---YQREKEWERAIQAA 164 >gi|119468598|ref|ZP_01611650.1| Beta-lactamase class C family protein [Alteromonadales bacterium TW-7] gi|119447654|gb|EAW28920.1| Beta-lactamase class C family protein [Alteromonadales bacterium TW-7] Length = 469 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + VY D+ R + E + L +++++A++ F FP A ++ AF Sbjct: 373 KQVYKDNGYSRFIGRTINEVGMELLSTKSWTEAFDMFEYLVSLFPN---APQAYDSLAFA 429 Query: 104 QYSAGKYQQAASL 116 S G + A S Sbjct: 430 YLSKGDSEAAKST 442 >gi|75911090|ref|YP_325386.1| hypothetical protein Ava_4894 [Anabaena variabilis ATCC 29413] gi|75704815|gb|ABA24491.1| TPR repeat protein [Anabaena variabilis ATCC 29413] Length = 156 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 18/113 (15%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEE 119 +++ L ++A Q ++ P FA R++ L YS G+YQ++ + + Sbjct: 45 DQSQKLLDAGEITEAEVMLTQLIQEQPDFAEAWNRRAFL-----YYSMGEYQKSLADCQM 99 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 I P + +G+ YA + + ++ R +E S Sbjct: 100 VIQINPVHFG---ALHGIGLCYAALGKYA--------KAIKAFKRALEIQPYS 141 >gi|46199597|ref|YP_005264.1| hypothetical protein TTC1295 [Thermus thermophilus HB27] gi|46197223|gb|AAS81637.1| hypothetical protein TT_C1295 [Thermus thermophilus HB27] Length = 453 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 30/81 (37%), Gaps = 7/81 (8%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E+ L E +++A F + R + ++ L G+ ++A ++ Sbjct: 28 ERGERLLSEGAYAEAVAAFEEVLRQD-YGQF--QAHLGLGVALVRLGRLEEARFAFDQMT 84 Query: 122 TQYP----ESKNVDYVYYLVG 138 +P N+ VY +G Sbjct: 85 RVFPDRYEGHFNLGQVYLRMG 105 >gi|17230729|ref|NP_487277.1| hypothetical protein all3237 [Nostoc sp. PCC 7120] gi|17132332|dbj|BAB74936.1| all3237 [Nostoc sp. PCC 7120] Length = 156 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 18/113 (15%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEE 119 +++ L ++A Q ++ P FA R++ L YS G+YQ++ + + Sbjct: 45 DQSQKLLDAGEITEAEVMLTQLIQEQPDFAEAWNRRAFL-----YYSMGEYQKSLADCQM 99 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 I P + +G+ YA + + ++ R +E S Sbjct: 100 VIQINPVHFG---ALHGIGLCYAALGKYA--------KAIKAFKRALEIQPYS 141 >gi|16331197|ref|NP_441925.1| hypothetical protein slr1939 [Synechocystis sp. PCC 6803] gi|1653691|dbj|BAA18603.1| slr1939 [Synechocystis sp. PCC 6803] Length = 669 Score = 37.4 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 3/67 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +K + L+ Q + A E R P + K+ + + G++ Q+ + E Sbjct: 11 QKGLKALQNQEYQSAIEALEMVCRRVPQQESPEFLKAQMALVRAYRAIGRFDQSREICE- 69 Query: 120 YITQYPE 126 Y+T+ P Sbjct: 70 YLTRNPN 76 >gi|323448338|gb|EGB04238.1| hypothetical protein AURANDRAFT_72573 [Aureococcus anophagefferens] Length = 1054 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 58/153 (37%), Gaps = 32/153 (20%) Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY-TNSPYVKGARFYVTV 184 +K++D L ++ A + D A K L++ +ERY V A + Sbjct: 773 TNKHIDQ---LRKLTKAIQDARISRDNEAIKQSLKFYDEALERYIP----VLMAMARIYW 825 Query: 185 ------GRNQL--------AAKE---VEIGR-YYLKRGEYVAAIPRFQLVL----ANYSD 222 +L + E + + ++++ ++ AI + ++ N D Sbjct: 826 DKENYPMVERLFRQSAEFCSEHEVWKLNVAHVFFMQESKFKEAIRYYDPIVKKKSENILD 885 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 +A L +Y+ + +EA E++ I++ Sbjct: 886 VPAI--VLANLCVSYIMTSQNEEAEELMRKIEK 916 >gi|310821065|ref|YP_003953423.1| transglycosylase slt domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309394137|gb|ADO71596.1| Transglycosylase SLT domain protein [Stigmatella aurantiaca DW4/3-1] Length = 806 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 26/58 (44%) Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 E + + +R+FP A +L +A + + QA + EE YP++ + + Sbjct: 391 ETYERLAREFPGHSFADDALFYAADLYVKTNQLDQALARLEELERNYPKADFLGEALF 448 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 8/50 (16%), Positives = 23/50 (46%) Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 ++ + + A++A+ + YV +D+A + ++ YP+ + Sbjct: 393 YERLAREFPGHSFADDALFYAADLYVKTNQLDQALARLEELERNYPKADF 442 >gi|300936489|ref|ZP_07151409.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1] gi|300458411|gb|EFK21904.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1] Length = 248 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 19/155 (12%), Positives = 47/155 (30%), Gaps = 23/155 (14%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS--LLMSAFVQYS 106 + + + Y A + + +A ++ Q A ++ +L A Q++ Sbjct: 78 EELAIAETNQNHYALANELARLGRYHEAVPHYQQALS----GIFAHEAVMMLSLAQAQFA 133 Query: 107 AGKYQQAASLGEEYITQYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 ++ E+ + P+ ++ D ++ + ++ Q + Sbjct: 134 IQEFAACQQTLEDVMRYNPDFQSADGHLLFARALA----------AQEKYADAESEFEVL 183 Query: 166 VERYTNSP---YVKGARFYVTVGRNQLAAKEVEIG 197 V Y Y ++ R A E I Sbjct: 184 VSYYPGPQARIYYAEMLAKMSRLRE---ANEQYIA 215 >gi|296127253|ref|YP_003634505.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] gi|296019069|gb|ADG72306.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] Length = 946 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 14/137 (10%), Positives = 35/137 (25%), Gaps = 38/137 (27%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSV---TDVRYQREVYEKAVLFL------- 68 + K + I++ L + + +D + + ++ Y A Sbjct: 1 MKKLLIIFSIFISLSSLFAQNVAPNDERNIDREFYNAEKLFFQKKYNFAREAFLLYLKRR 60 Query: 69 -----------------KEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAG 108 +++ + A +Y+ + + + A Y Sbjct: 61 PLSTNDMLYYYIGACYFQDKQYQNAIDYYKLAFDINDSYSYCN-------NIANSYYQLK 113 Query: 109 KYQQAASLGEEYI-TQY 124 Y+ A I Y Sbjct: 114 NYEDALLWYNRSIERLY 130 >gi|291569425|dbj|BAI91697.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 275 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 70/223 (31%), Gaps = 41/223 (18%) Query: 24 LTIFFSIAVCFL---------VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74 L +F ++ C+L + W + + ++ E+ E+A + F Sbjct: 4 LILFLTVVFCWLWLGVVSPYNLAWAATETVGETVAEIS-TLSLDELLERAFSTSQAGRFP 62 Query: 75 KAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 +A Y+ + +P + + + S + +A I P Sbjct: 63 EAESYWTEIINRYPDNPAMWSNRGNVRV-----SQNRLTEAIGDYNRAIELAPT---AAD 114 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 Y G++Y + R + +R +E A Y G + K Sbjct: 115 AYLNRGVAYEGLGRWSD--------AIADYNRTLELSP-----SDAIAYNNRGNAEAGQK 161 Query: 193 --EVEIGRYYLKRG---EYVAAIPRFQLVLANYSDAEHAEEAM 230 E I Y+ Y A R LA Y ++ +EA+ Sbjct: 162 NWEAAIADYFQAAELDPNY--AFARANYALALY-ESGETKEAI 201 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 28/72 (38%), Gaps = 9/72 (12%) Query: 62 EKAVLFLKEQNFSKAY-EYFNQ--CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + ++N+ A +YF ++ F + A Y +G+ ++A + Sbjct: 152 NRGNAEAGQKNWEAAIADYFQAAELDPNYAF------ARANYALALYESGETKEAIRNIK 205 Query: 119 EYITQYPESKNV 130 I +YP ++ Sbjct: 206 NLIRKYPNFADM 217 >gi|219111917|ref|XP_002177710.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217410595|gb|EEC50524.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 977 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 41/125 (32%), Gaps = 32/125 (25%) Query: 50 SVTDVRYQREVYEKAVL---------------FLKEQNFSKAYEYFN---QCSRDFPFAG 91 D+R R++Y+ A+ E+N+++A F + R Sbjct: 619 EANDIRRARQLYKAALDVDPRSSVAWLQLGVMEADEENWNEAETCFETALKFDRR----- 673 Query: 92 VARKSLLMSAFVQYS----AGKYQQAASLGEEYITQYPESKNV--DYVYYLVGMSYAQMI 145 S L+ A+ G ++A L E + P V Y Y+ + Sbjct: 674 ---NSRLLQAYALMETKRPNGNSRKAIGLLERALKANPRDAGVLQAYALYVAELGDVDAA 730 Query: 146 RDVPY 150 RD+ Sbjct: 731 RDLLR 735 >gi|171915884|ref|ZP_02931354.1| TPR domain protein [Verrucomicrobium spinosum DSM 4136] Length = 596 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 66/198 (33%), Gaps = 34/198 (17%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF------VQYSAGKYQQAA 114 Y +A+ + ++ A + F Q SR A LL F + ++ AA Sbjct: 386 YHRAIALTQGDKYADAAKLFEQASRQAETNA-AE--LLDDQFHFHWGVALERSRQFDAAA 442 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 E+ IT P + + + + DQ L +++ + Sbjct: 443 RQFEKSITLTPAH-DPP-----RAANTMNYLGYMWLDQG---QHLDKAEQLIRK------ 487 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP---RFQLVLANYSDAEHAEEAMA 231 + L G KRG+ A+ R + ++ +SD+ E + Sbjct: 488 ANELEQNNPAFVDSL-------GWLLFKRGKAKEALTELLRAEHLMKEFSDSGADAEILD 540 Query: 232 RLVEAYVALALMDEAREV 249 + +AY L ++A+ Sbjct: 541 HIAQAYEQLGQTEDAKSY 558 >gi|153212744|ref|ZP_01948401.1| GGDEF family protein [Vibrio cholerae 1587] gi|153828784|ref|ZP_01981451.1| GGDEF family protein [Vibrio cholerae 623-39] gi|124116394|gb|EAY35214.1| GGDEF family protein [Vibrio cholerae 1587] gi|148875737|gb|EDL73872.1| GGDEF family protein [Vibrio cholerae 623-39] Length = 667 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100 D+ L + D +Y L + + A +Y N+ + + Sbjct: 215 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 274 Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + G+Y+++ E+ + P + + YV+ +G +Y ++ V DQ Sbjct: 275 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 332 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L+Y++ + + LA + K +Y AI Sbjct: 333 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 374 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A S++ +AY+ LA + EA + Sbjct: 375 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 402 >gi|169863459|ref|XP_001838351.1| ADP/ATP carrier receptor [Coprinopsis cinerea okayama7#130] gi|116500644|gb|EAU83539.1| ADP/ATP carrier receptor [Coprinopsis cinerea okayama7#130] Length = 606 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 20/114 (17%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 Y + + +F KA E + + F F+ + A QY AG + Sbjct: 394 PDIYYHRGQVLFIMSDFDKAAEDYTKSTELDDQFVFSH------IQLAVAQYKAGNIANS 447 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 + + +P+ YY ++ DQ+ + ++ R +E Sbjct: 448 MAQFRRTMKAFPQRSE-PQNYY----------GELLLDQQRYQDAVEKFDRAIE 490 >gi|73542251|ref|YP_296771.1| hypothetical protein Reut_A2566 [Ralstonia eutropha JMP134] gi|72119664|gb|AAZ61927.1| TPR repeat [Ralstonia eutropha JMP134] Length = 407 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 8/84 (9%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + + + +YE FL+ +A E + P+A A++ LL Sbjct: 100 PDLPEPEREHALYELGQDFLRAGLLDRAEESLRRLMS-GPYAASAKRVLLEL---YEVEK 155 Query: 109 KYQQAASLGEEYITQYPESKNVDY 132 ++Q+A E +N DY Sbjct: 156 EWQKAIDAARELQAL----ENKDY 175 >gi|118581822|ref|YP_903072.1| hypothetical protein Ppro_3422 [Pelobacter propionicus DSM 2379] gi|118504532|gb|ABL01015.1| TPR repeat-containing protein [Pelobacter propionicus DSM 2379] Length = 713 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 56/185 (30%), Gaps = 37/185 (20%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +EV+ A L + N S+A E F Q + + +L Y KY QA S Sbjct: 202 QEVFLAAEAALYKGNLSEAEEGFAQFTSRK--TAIQPLALYRLGETHYKLQKYSQALSSF 259 Query: 118 EE-------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 E ++ P +++ + +S ++ R Sbjct: 260 REAEKLWPAFLNLNP------------AVTFY-YGDSIARG-GDLSAARSLLSGLIARLA 305 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 + + + E E A+ ++ V N+ D + AM Sbjct: 306 EKKFAPVLLVRMADILVRQ-GHEQE-------------ALGVYRTVSENFRDNKATWIAM 351 Query: 231 ARLVE 235 RL + Sbjct: 352 LRLKD 356 >gi|186686820|ref|YP_001870013.1| WD-40 repeat-containing protein [Nostoc punctiforme PCC 73102] gi|186469172|gb|ACC84972.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102] Length = 2172 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 69/226 (30%), Gaps = 55/226 (24%) Query: 55 RYQREVY---EKAVLFLKEQNFSKAYEYF-NQCS--RDFPFAGVARKSLLMSAFVQYSAG 108 ++ + Y E + NF+KA + + + + SL V S G Sbjct: 1477 DHENQAYMLRELGNAYYCLGNFTKAIASYSQSLENASKYNYLQIELNSLSNLGRVYNSLG 1536 Query: 109 KYQQAASLGEEYIT---QY--PESKNVD------YVYYLVGMSYAQMIRDVPYDQRATKL 157 Y A E + + P++K D Y YY + A+K Sbjct: 1537 DYDIAIKYYNEALKILDMHDAPQNK-TDVLRGRGYAYYQ-----------NNKLEEASKD 1584 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 LQ + + V A +V + Y G++ AI ++ L Sbjct: 1585 YLQALD-----------IDEKNKNVAGI----AINKVNLANIYFYLGDFFQAIQYYREAL 1629 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEARE------VVSLIQERY 257 EA+A L Y+A +A + + E Y Sbjct: 1630 EFSPS-----EALAGLGNIYLAFGDTAKAVDLHQQSLAKAQQDENY 1670 >gi|322694969|gb|EFY86786.1| DNAJ domain containing protein [Metarhizium acridum CQMa 102] Length = 696 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 4/82 (4%) Query: 50 SVTDVRYQREVYEKA-VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 V E Y+ A F K++N++KA E +++ FP + L A + S G Sbjct: 189 PVPTALDDAEAYKAAGNRFFKDKNYTKAIEQYSKAVDLFPDSP---TYLSNRAAARMSNG 245 Query: 109 KYQQAASLGEEYITQYPESKNV 130 +Y A P++ + Sbjct: 246 QYAAALEDCSRAADLDPQNSKI 267 >gi|294866079|ref|XP_002764601.1| Hsc70-interacting protein, putative [Perkinsus marinus ATCC 50983] gi|239864162|gb|EEQ97318.1| Hsc70-interacting protein, putative [Perkinsus marinus ATCC 50983] Length = 380 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 55/149 (36%), Gaps = 20/149 (13%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG----VARKSLL 98 +D+ D + Q + ++AV +++ + KA E + + AR++ + Sbjct: 123 DKDLNDDEMDQ---QAGLKQEAVEAMEDGDLEKALEKYTKAINI--GGATALLFARRAAV 177 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR--DVPYDQRATK 156 + + A + + + P+S Y + G++ ++ R + D A + Sbjct: 178 LL-----KLRRPLAAMNDADAALKLNPDSGR---AYRIRGVANRRLQRWEEAHSDLAAAQ 229 Query: 157 L-MLQYMSRIVERYTNSPYVKGARFYVTV 184 + + R+ + + K A+ Sbjct: 230 NIDFDEATEEIHRFVDEKWSKIAQLRRDY 258 >gi|209920990|ref|YP_002295074.1| cellulose synthase subunit BcsC [Escherichia coli SE11] gi|209914249|dbj|BAG79323.1| putative cellulose synthase [Escherichia coli SE11] gi|324021167|gb|EGB90386.1| tetratricopeptide repeat protein [Escherichia coli MS 117-3] Length = 1157 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 77/237 (32%), Gaps = 38/237 (16%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQY-PESKNVDYVY--YLVG-------MSYAQMIRDV 148 + + AG+ QA + Q+ P Y Y YL G +++ I + Sbjct: 500 RLSQDLWQAGQRSQA-DTLMRNLAQHKPNDPEQVYAYGLYLSGHDQDRAALAH---INSL 555 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEI 196 P Q + +V R S V + G+ A ++ + Sbjct: 556 PRAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTL 609 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 610 ADWAQQRRDYTAARAAYQNVLTREP---ANADAILGLTEVDIAAGDKAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 60/210 (28%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + + P Y L Sbjct: 508 AGQRSQADTLMRNLAQHKPNDPEQVYAYGL 537 >gi|111224569|ref|YP_715363.1| hypothetical protein FRAAL5188 [Frankia alni ACN14a] gi|111152101|emb|CAJ63828.1| hypothetical protein; putative TPR domains [Frankia alni ACN14a] Length = 147 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 45/111 (40%), Gaps = 14/111 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + + L + + A + P + R++ Q+SAG+Y A Sbjct: 33 YTRGMALLGHGDANAAVQLLAHAVAAEPASPSVREA---LGRAQFSAGQYVAARETFAWI 89 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + ++P DY + +G+S A+ I D+ + +++++ V + Sbjct: 90 VDRHPTD---DYAQFGLGLS-ARKIGDL-------RAAVEHLALAVAMRPD 129 >gi|160879337|ref|YP_001558305.1| peptidase S41 [Clostridium phytofermentans ISDg] gi|160428003|gb|ABX41566.1| peptidase S41 [Clostridium phytofermentans ISDg] Length = 897 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 18/149 (12%), Positives = 50/149 (33%), Gaps = 19/149 (12%) Query: 39 ERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARK 95 + Q + D+Y +++ + ++ Y A + + +A +Y + + + + K Sbjct: 395 DSQKAEDLYKNALEKNQDDYDLLYSVAEFYQDNGKYDEAIQYAERAINTDESEYKAYGIK 454 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + + G+ Q+A + ++ + YY G Y Sbjct: 455 AQ-----TFFWQGEKQKAIDTIDLMTRNNLQNAD---AYYAAGNLYMNEYE--------Y 498 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTV 184 K ++ +++E + Y + Sbjct: 499 KFAVENYDKVLEMNPLNEYACIGKIRALY 527 >gi|22298629|ref|NP_681876.1| hypothetical protein tll1085 [Thermosynechococcus elongatus BP-1] gi|22294809|dbj|BAC08638.1| tll1085 [Thermosynechococcus elongatus BP-1] Length = 689 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 12/96 (12%), Positives = 24/96 (25%), Gaps = 22/96 (22%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS----- 115 Y + ++ A F K+ L ++Q+A Sbjct: 14 YVAGLAAFNRGDYQLAIAAFKAVIASHGQRREGLKAHLHLIKAYAYTHQWQEAIELCQLL 73 Query: 116 -----------------LGEEYITQYPESKNVDYVY 134 E Y+ + P S ++ +V Sbjct: 74 ARSPVVPIRTWAQKHLPELERYMDEEPTSPHLVFVM 109 >gi|307258932|ref|ZP_07540663.1| UDP-N-acetylglucosamine-peptide-n- acetylglucosaminyltransferase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306866956|gb|EFM98813.1| UDP-N-acetylglucosamine-peptide-n- acetylglucosaminyltransferase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 495 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 30/179 (16%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL-----KEQNFSKAYEYFNQCSRDFPFA 90 +G + + + + EVY +A + L ++ F +A FN SR+ Sbjct: 7 LGKQGKVDEAIVAYRNVNREDSAEVYVRAQINLGITLGEQGKFDEAIAAFNNVSREDSTE 66 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD--Y--VYYLVGMSYAQMIR 146 A + + G+ +A + ++ Y V +L+G+ + + Sbjct: 67 LYAI-AQVNLGITLRKQGRGDEAIVAY-----RNVNREDSAKLYVKVQFLLGLIFESQDK 120 Query: 147 DVPYDQRATKLMLQY--MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 + +S VE Y A+ Y+ V + KE+ I + + R Sbjct: 121 LDE-----ARDAFNNIRLSDSVELY------TKAQVYLKVLN--IGKKEIRISLFNIHR 166 >gi|255521858|ref|ZP_05389095.1| hypothetical protein LmonocFSL_11642 [Listeria monocytogenes FSL J1-175] Length = 491 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 13/145 (8%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 + + + +E+ V ++Q +A Y + S P V L Sbjct: 2 EKDKKTPAKIYPFYPNGQFYFERGVEAFRDQRIKEAIRYLVRASELEPGEAV---ILCQL 58 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A G++ ++ L E + Q + N++Y YY + ++A M + + LQ Sbjct: 59 AICYTEIGQFHKSNQLLREVLEQ--RNGNMEYCYYFIANNFAYM--------KDYRRALQ 108 Query: 161 YMSRIVERYTNSPYVKGARFYVTVG 185 Y +R ++ T+S Y + A+ + V Sbjct: 109 YANRYLDSSTDSEYTEEAKDLIEVL 133 >gi|194214883|ref|XP_001496400.2| PREDICTED: similar to aspartyl (asparaginyl) beta hydroxylase [Equus caballus] Length = 775 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 23/79 (29%), Gaps = 17/79 (21%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 + + + +V +Y SP + + + LA K +R V Sbjct: 369 RKRGKIEEAVNAFEELVRKYPQSPRARYGKA---QCEDDLAEK---------RRSNEV-- 414 Query: 210 IPRFQLVLANYSDAEHAEE 228 + + Y + + Sbjct: 415 ---LRRAIETYQEVAALPD 430 >gi|161528527|ref|YP_001582353.1| TPR repeat-containing protein [Nitrosopumilus maritimus SCM1] gi|160339828|gb|ABX12915.1| Tetratricopeptide TPR_2 repeat protein [Nitrosopumilus maritimus SCM1] Length = 273 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 49/141 (34%), Gaps = 17/141 (12%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 ++ + V +++ A +FN+ + P ++LL KYQ Sbjct: 6 KKEDPEDLMYEGVGMMEKNQPKAAISFFNKVLKQEPEN---TEALLQKGLALNLIKKYQD 62 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A + ++ I P+ G+S A+ + +Y R +E +S Sbjct: 63 AITCFDKLIEIDPKD---AQALNNRGISMAET--------GNIQGAAEYYDRAIEA--DS 109 Query: 173 PYVKGARFYVTVGRNQLAAKE 193 Y A F V ++L E Sbjct: 110 KYAS-AYFNKGVLLDKLQEHE 129 Score = 35.1 bits (80), Expect = 9.5, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 43/197 (21%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D + + + + + + N A EY++ + + A + LL + Sbjct: 74 DPKDAQALNNRGISMAETGNIQGAAEYYDRAIEADSKYASAYFNKGVLLD------KLQE 127 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 +++A ++ E+ IT P N + Y G+ ++ R+ + L S + ++Y Sbjct: 128 HEEALTVLEKAITIDPRKPNA--MIY-KGIVLGKLKRN--------EEALNCFSNVCKKY 176 Query: 170 TNSPYV----------KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 N+ ++L K Y + A R L Sbjct: 177 PNNLDAFFQKGVQLAELDQHKKALDVFDELLKK-------YKDNVNVIYAKSRSMAALEK 229 Query: 220 YSDAEHAEEAMARLVEA 236 Y E++ L +A Sbjct: 230 YP------ESLELLKQA 240 >gi|325474428|gb|EGC77615.1| hypothetical protein HMPREF9353_01194 [Treponema denticola F0402] Length = 429 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 28/63 (44%), Gaps = 12/63 (19%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CS 84 SI V L+G +++ + + +++Y +A+ +N+ KA E + + Sbjct: 349 ISIGVKLLLGQDKRDEK---------LSTVKKLYVQALKEYNNKNYEKAIELWKEILTID 399 Query: 85 RDF 87 + + Sbjct: 400 KRY 402 >gi|298244613|ref|ZP_06968419.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter racemifer DSM 44963] gi|297552094|gb|EFH85959.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter racemifer DSM 44963] Length = 853 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 63/187 (33%), Gaps = 45/187 (24%) Query: 91 GVARKS--LL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 A+++ L A V + A +Y++A + P Y + + ++ Sbjct: 292 DWAQEASAQLWADQALVLHDAKRYEEAKETCSRALALNPRF-YEAYAH--RALIKYEL-- 346 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY------- 199 + L+ ++ +VE + ++ A Y + ++L E I Sbjct: 347 ------KDYAAALEDLNHVVEFAPD---LQVAYKYRALVYHKLEQFEQAIANQTHILERD 397 Query: 200 -------------YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA--YVALALMD 244 Y + ++ AA+ FQ + + A+A +A Y L Sbjct: 398 DADAVMYNNRGYAYQRLEQFQAALADFQQAITLFPRF-----ALAYANQAGVYRELGEFQ 452 Query: 245 EAREVVS 251 +A++ + Sbjct: 453 KAQDNIQ 459 >gi|224086187|ref|XP_002192972.1| PREDICTED: cell division cycle protein 27 isoform 1 [Taeniopygia guttata] Length = 833 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 51/196 (26%), Gaps = 50/196 (25%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 636 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-------YVKGARFY 181 N +Y +GM Y + Q L + + ++ S V+ A Sbjct: 637 N---AWYGLGMIYYK--------QEKFSLAEMHFQKALDINPQSSVLLCHIGVVQHALKK 685 Query: 182 VTVGRNQLAAKEVEI-----------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 + L K + I +Y +A+ + + Sbjct: 686 SEKALDTL-NKAINIDPKNPLCKFHRASVLFANEKYKSALQELEELKQIVPKESLVY--- 741 Query: 231 ARLVEAYVALALMDEA 246 + + Y L A Sbjct: 742 FLIGKVYKKLGQTHLA 757 >gi|255599846|ref|XP_002537324.1| conserved hypothetical protein [Ricinus communis] gi|223516734|gb|EEF25059.1| conserved hypothetical protein [Ricinus communis] Length = 313 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 55/154 (35%), Gaps = 26/154 (16%) Query: 94 RKSLLMSAFVQYSA--------GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 ++S L + ++A + E + ++P+S + +YY + ++ Sbjct: 153 QQSNLKIYNAYFEMANFYRDVLEDKKEAIATYETLLARFPQSSDKPSIYY----NLYRLY 208 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY----- 200 D+ Y +R+++ Y S + R +LA + +Y Sbjct: 209 ADID-----ATKSNDYKNRLLKEYPESVFA-KVILDPDYAR-KLADVDAVFNGFYNEVYD 261 Query: 201 -LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 + +Y I + +L Y D +A + + L Sbjct: 262 QYAQKQYAKVIEKANDLLNKYPDNRYAAQ-LYYL 294 >gi|51244491|ref|YP_064375.1| hypothetical protein DP0639 [Desulfotalea psychrophila LSv54] gi|50875528|emb|CAG35368.1| hypothetical membrane protein (BatB) [Desulfotalea psychrophila LSv54] Length = 566 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 12/104 (11%), Positives = 33/104 (31%), Gaps = 11/104 (10%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + +++ A + + + + + Y G+ A ++ + Sbjct: 366 EGEDAYNRADYAGAQKIYKSLLK---GSPDDPQLQYNMGTAAYKNGEIDTAILQFKKCLQ 422 Query: 123 QYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 ++V+ YY +G SY Q + D + ++ Sbjct: 423 T----EDVELQKRAYYNLGTSYYQKGKKSS-DTEPLEEAIKAYD 461 >gi|301025865|ref|ZP_07189353.1| tetratricopeptide repeat protein [Escherichia coli MS 69-1] gi|300395794|gb|EFJ79332.1| tetratricopeptide repeat protein [Escherichia coli MS 69-1] Length = 1157 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 78/236 (33%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + + +V R S V + G+ A ++ + Sbjct: 557 RAQWS-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA ++ VL +A+ L E +A AR ++ + Sbjct: 611 DWAQQRRDYTAARAAYKNVLTREPT---NADAILGLTEVDIAAGDKAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|256020877|ref|ZP_05434742.1| cellulose synthase subunit BcsC [Shigella sp. D9] gi|332282091|ref|ZP_08394504.1| cellulose synthase subunit [Shigella sp. D9] gi|332104443|gb|EGJ07789.1| cellulose synthase subunit [Shigella sp. D9] Length = 1157 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + +V R S V + G+ A ++ + Sbjct: 557 RAQWN-----SNIHELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWAQQRRDYTAARAAYQNVLTREPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|225850275|ref|YP_002730509.1| tetratricopeptide repeat domain protein [Persephonella marina EX-H1] gi|225644893|gb|ACO03079.1| tetratricopeptide repeat domain protein [Persephonella marina EX-H1] Length = 650 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 23/133 (17%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDF-PFAGVARKSLLMSAFVQY-------SAGKYQQAA 114 K +L ++ N+ KAYEY ++ +++ P+ L+ + + Y KY+ + Sbjct: 200 KGLLEFQKGNYEKAYEYLSKVYKEYEPY-------LIENPYYYYIFAENTYRIRKYEFSK 252 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 L I+ + + + +G D+ + Y IVE+Y +S Sbjct: 253 QLFRRIISLIKDEEIIRRSLLRLG--------DIFNIKGDKITAFNYYYSIVEKYPDSQE 304 Query: 175 VKGARFYVTVGRN 187 K A+ + + Sbjct: 305 AKVAKLKILSMED 317 >gi|239815273|ref|YP_002944183.1| hypotheticalprotein [Variovorax paradoxus S110] gi|239801850|gb|ACS18917.1| TPR repeat-containing protein [Variovorax paradoxus S110] Length = 740 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 14/107 (13%), Positives = 36/107 (33%), Gaps = 14/107 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + V L++ ++A + F+ + +L + ++Q+A + Sbjct: 148 YNRGVALLEKGRHAEALDDFDAVLAR---SSDDLDALCQRIYALCGLQRHQEALAESNHA 204 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 I ++P S + + V + Q R+++ Sbjct: 205 IARHPSSADA-----------WRAHGHVLLGMGNSLQAAQAFERVID 240 >gi|254225343|ref|ZP_04918955.1| GGDEF family protein [Vibrio cholerae V51] gi|125622184|gb|EAZ50506.1| GGDEF family protein [Vibrio cholerae V51] Length = 667 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100 D+ L + D +Y L + + A +Y N+ + + Sbjct: 215 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 274 Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + G+Y+++ E+ + P + + YV+ +G +Y ++ V DQ Sbjct: 275 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 332 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L+Y++ + + LA + K +Y AI Sbjct: 333 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 374 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A S++ +AY+ LA + EA + Sbjct: 375 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 402 >gi|94968763|ref|YP_590811.1| TPR repeat-containing serine/threonin protein kinase [Candidatus Koribacter versatilis Ellin345] gi|94550813|gb|ABF40737.1| serine/threonine protein kinase with TPR repeats [Candidatus Koribacter versatilis Ellin345] Length = 737 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 9/68 (13%), Positives = 26/68 (38%), Gaps = 3/68 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y ++ + +A + P + + M + G++++A + +E+ Sbjct: 582 YAYGLMLYYSHRWDEAAAQLRRALEVLPT---MQLAQGMRSVALARGGRHEEAKAQYQEF 638 Query: 121 ITQYPESK 128 I +P + Sbjct: 639 IRDHPTTP 646 >gi|90023206|ref|YP_529033.1| coenzyme A biosynthesis protein [Saccharophagus degradans 2-40] gi|89952806|gb|ABD82821.1| Tetratricopeptide region [Saccharophagus degradans 2-40] Length = 957 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 60/175 (34%), Gaps = 24/175 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ +V ++ + + +A +P ++R AF+ + ++ +AA++ + Sbjct: 651 YDASVYLMELKRWDEAENVLTTFKTRYPTNSLSRDIPAKLAFIYQESEQWDKAAAVLAKM 710 Query: 121 ITQYPESKNVD-----YVYYLVGMSY---------AQMIRDVPYD-QRATKLMLQYMSRI 165 S D YL Y + RD ++ + L + ++ Sbjct: 711 -----ASDESDPELRRQSRYLSAELYEKSGRPAKAIEQYRDYAHNYPQPFGLATEARYKL 765 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 V Y + + +A + + G R Y+AA+ + +Y Sbjct: 766 VTLY---EQAGDSSKRRFWLKELIAENK-KAGDSKTARSNYLAAMAASEFAQDDY 816 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 78/236 (33%), Gaps = 47/236 (19%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +R +Y+ + + + ++ + D P + A ++ A + +S G Y + L Sbjct: 126 ERILYQLSKAYALDGKLDESNQVLGALVSDHPESDYAAEAEFRRAELAFSEGDYALSEKL 185 Query: 117 GEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV------- 166 + + K + Y+ G S + + + ++ + ++ Sbjct: 186 YAQVMA---RGKETPFYLNAVYMHGWSQFKR--------NSYRASIRSFTEVLDTVLVEG 234 Query: 167 ---ERYTNSP----------------YVKGARFYVTVGRNQLAAKE------VEIGRYYL 201 E +NS Y+ GA +T N L + +++G YL Sbjct: 235 QSSEEMSNSQKNMAADTLRIVAIVFSYIDGAET-ITEVYNNLGQRHYQYMLYMQLGDLYL 293 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 ++ Y + ++ + ++ A + + +E Y E + Y Sbjct: 294 EKRRYRDSADTYRHYVKHFPTTNQAPDFSVKAIEVYNLGNFPSEILPAKEEYVQNY 349 Score = 35.9 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 17/52 (32%) Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 Y+ A + + + E E + EAY EA + + Y Sbjct: 421 YLKAADFYNQFVRTFPQDEKTPEMAFLMGEAYFEAGYYPEAADAYEAVAYDY 472 >gi|67925473|ref|ZP_00518813.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] gi|67852680|gb|EAM48099.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] Length = 240 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 26/82 (31%), Gaps = 10/82 (12%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + N+ KA ++ P + + L+ Y QA + + I Sbjct: 50 KQEANQGNYQKAIAILDKLIARLPNSAIDYNNRGLM-----YLKIADYDQAMTDFNKAIA 104 Query: 123 QYPESKNVDYVYYLVGMSYAQM 144 S ++D Y G YA Sbjct: 105 L---SPSLDRAYNNRGNCYAHQ 123 >gi|330507167|ref|YP_004383595.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6] gi|328927975|gb|AEB67777.1| TPR-repeat protein [Methanosaeta concilii GP-6] Length = 161 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 14/106 (13%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 K + ++ +F KA EYF + P A Y G+ +A + I Sbjct: 11 KGMDCVRRMDFEKAIEYFQIVTASNPDMPEAWN---NLGVAFYGLGRIDEALESYDRSIA 67 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 P + + + + +Q+ L+ ++E+ Sbjct: 68 LDPSNLDA-----------LRNRAFLLRNQKRLPEALEAYDTVLEK 102 >gi|309782751|ref|ZP_07677472.1| tetratricopeptide repeat protein [Ralstonia sp. 5_7_47FAA] gi|308918529|gb|EFP64205.1| tetratricopeptide repeat protein [Ralstonia sp. 5_7_47FAA] Length = 209 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 32/97 (32%), Gaps = 13/97 (13%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 I S G + TD + + + +A K KA + + Q + Sbjct: 13 FIVLSAVAALFAGCSTTN-----PGPQTDEAFGQSM-SEAEAAAKGGQQDKAIDLYQQIA 66 Query: 85 RDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + P R + + Q+ A KY QA EE Sbjct: 67 KQNPTRDEPWVRIAQI-----QFGAEKYPQAILAAEE 98 >gi|302816471|ref|XP_002989914.1| hypothetical protein SELMODRAFT_447866 [Selaginella moellendorffii] gi|300142225|gb|EFJ08927.1| hypothetical protein SELMODRAFT_447866 [Selaginella moellendorffii] Length = 899 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 3/62 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +Y L F +A E +++ P + ++ L A AG ++A Sbjct: 432 DALYNLGGLLRDTGRFQRAAEVYSRVLSLNP-SHW--QAQLNRAVSLLGAGDTEEARKAL 488 Query: 118 EE 119 +E Sbjct: 489 KE 490 >gi|282896150|ref|ZP_06304175.1| hypothetical protein CRD_01036 [Raphidiopsis brookii D9] gi|281198950|gb|EFA73826.1| hypothetical protein CRD_01036 [Raphidiopsis brookii D9] Length = 706 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 67/208 (32%), Gaps = 44/208 (21%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKY 110 D Y Y + +L + + A +NQ + P + L+ S G Sbjct: 514 DHNYTDAYYNRGILRSELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRS-----ELGDN 568 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 Q A + + I P N YY G ++++ + + ++ + Sbjct: 569 QVAIADYNQAIKLNP---NYALAYYNRGTVHSEL--------GDKRGAIADYNQAIRLDP 617 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRG------EY-VAAI 210 N A + + R++L K+ I Y Y RG Y AI Sbjct: 618 N---YTDAYYNRGILRSELGDKQGAIDDYNQAIKLDPNYANAYYNRGIIRSELGYNQGAI 674 Query: 211 PRFQLVLANYSDA---EHAEEAMARLVE 235 FQ + Y + +A+ R+ E Sbjct: 675 ADFQKAVNIYQQQGKENNYRDALDRIRE 702 Score = 35.5 bits (81), Expect = 9.3, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 56/166 (33%), Gaps = 25/166 (15%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKY 110 D Y Y + ++ + + A +NQ + P + L+ S G Sbjct: 412 DSNYTDAYYNRGIVRSELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRS-----ELGDN 466 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 Q A + + I P N YY G+ ++++ + + ++ + Sbjct: 467 QVAIADYNQAIKLNP---NYALAYYNRGIVHSEL--------GDKRGAIADYNQAIRL-- 513 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG---EYVAA-IPR 212 + Y A + + R++L K+ I Y Y A I R Sbjct: 514 DHNYT-DAYYNRGILRSELGDKQGAIVDYNQAIKLNPNYTNAYINR 558 >gi|218550715|ref|YP_002384506.1| hypothetical protein EFER_3426 [Escherichia fergusonii ATCC 35469] gi|218358256|emb|CAQ90903.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469] Length = 248 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 18/155 (11%), Positives = 48/155 (30%), Gaps = 23/155 (14%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS--LLMSAFVQYS 106 + + + Y A + + +A ++ Q A ++ +L A Q++ Sbjct: 78 EELAIAETNQNHYALANELARLGRYHEAVPHYQQALS----GIFAHEAVMMLSLAQAQFA 133 Query: 107 AGKYQQAASLGEEYITQYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 ++ E+ + P+ ++ D ++ + ++ Q + Sbjct: 134 IQEFAACQQTLEDVMRYNPDFQSADGHLLFARALA----------AQEKYADAESEFEVL 183 Query: 166 VERYTNSP---YVKGARFYVTVGRNQLAAKEVEIG 197 V Y + Y ++ R A E + Sbjct: 184 VSYYPSPQARIYYAELLAKMSRLRE---ANEQYVA 215 >gi|207109494|ref|ZP_03243656.1| competence lipoprotein [Helicobacter pylori HPKX_438_CA4C1] Length = 137 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 6/107 (5%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + +K L I +I V ++ +D Y Y+ + + N A Sbjct: 32 KHFKTFLLITMAIIVIGTGCANKKKKKDEYNKPAIFW------YQGILREILFANLETAD 85 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 Y++ + + + +++L +Y A+ +EYI ++ Sbjct: 86 NYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRF 132 >gi|218961446|ref|YP_001741221.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] gi|167730103|emb|CAO81015.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] Length = 1530 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 52/186 (27%), Gaps = 34/186 (18%) Query: 64 AVLFLKEQNFSKAY-EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 L + + + A R + LL +++G Y A + I Sbjct: 854 GELQMLNKEYETAINSLLRTLQRFNNQGADVIQKLL--GDCYFASGNYASAIDKYIDAIQ 911 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-----NSPYVK- 176 P N YY +G +YA+ R + + ++ Y + Sbjct: 912 LNP---NEAEFYYCLGNAYAKS--------RKAREATNNFAIAYQKMPAEVKYGFAYAQA 960 Query: 177 --------GARFYVTVGRNQLAAKEVEIG--RYY----LKRGEYVAAIPRFQLVLANYSD 222 A + +A+ +Y +K Y A Q+ L D Sbjct: 961 LDKEFRSTEALTVMDNIYQYIASDSTTTAYHEFYHDLLIKEQRYDDAWKEIQIALKYAPD 1020 Query: 223 AEHAEE 228 + +E Sbjct: 1021 NKLLQE 1026 >gi|124003540|ref|ZP_01688389.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC 23134] gi|123991109|gb|EAY30561.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC 23134] Length = 629 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 53/143 (37%), Gaps = 7/143 (4%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 RD + + Y L + + +A + + + + + + L + + Sbjct: 486 RDNTALDMDTTNSAMKAYAGVELLMFQHKDKEALDKLVEMEKKYKDHSLKDEILWSKSKL 545 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 K+Q+ + E+ + Q+ + D ++ +G Y + +++ + +Y Sbjct: 546 LLKMAKFQETIEVLEQIVKQHGQDILADDAHFTIGKIYEEYLKNP-------EKAKEYYR 598 Query: 164 RIVERYTNSPYVKGARFYVTVGR 186 + ++ S YV AR + R Sbjct: 599 NHLTKFPGSIYVVEARKRFRIIR 621 >gi|121588006|ref|ZP_01677758.1| GGDEF family protein [Vibrio cholerae 2740-80] gi|121547747|gb|EAX57838.1| GGDEF family protein [Vibrio cholerae 2740-80] Length = 667 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100 D+ L + D +Y L + + A +Y N+ + + Sbjct: 215 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 274 Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + G+Y+++ E+ + P + + YV+ +G +Y ++ V DQ Sbjct: 275 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 332 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L+Y++ + + LA + K +Y AI Sbjct: 333 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 374 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A S++ +AY+ LA + EA + Sbjct: 375 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 402 >gi|39942232|ref|XP_360653.1| hypothetical protein MGG_03196 [Magnaporthe oryzae 70-15] gi|145015819|gb|EDK00309.1| hypothetical protein MGG_03196 [Magnaporthe oryzae 70-15] Length = 923 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 44/142 (30%), Gaps = 28/142 (19%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSA 107 D + Y ++ +Q + KAYE + Q P + Y Sbjct: 289 AADNSDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQI 342 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSR 164 +Y+ A I P + V+Y +G Y I D L R Sbjct: 343 NQYRDALDAYSRAIRLNP---YLSEVWYDLGTLYESCNNQIND----------ALDAYQR 389 Query: 165 IVERYTNSPYVKGARFYVTVGR 186 E ++P++ + + + R Sbjct: 390 AAELDPSNPHI---KARLNLLR 408 >gi|87307662|ref|ZP_01089806.1| hypothetical protein DSM3645_29112 [Blastopirellula marina DSM 3645] gi|87289832|gb|EAQ81722.1| hypothetical protein DSM3645_29112 [Blastopirellula marina DSM 3645] Length = 234 Score = 37.4 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 29/91 (31%), Gaps = 24/91 (26%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQC--SRDFP--FAG----VARKSLLMSAFVQYSAGKYQQ 112 Y A + + KA E F + S D P + + + +A Y Sbjct: 27 YRAAETAYQNGEYQKAIELFTEVAKSSDNPAIYGNRANCYSSLGDIDAA-----LKDYAT 81 Query: 113 AA-----SLGEEYITQYPESKNVDYVYYLVG 138 A + G+ P N+ Y YY G Sbjct: 82 AIEKATEATGD------PNDPNLAYFYYNRG 106 >gi|328872554|gb|EGG20921.1| tetratricopeptide-like helical domain-containing protein [Dictyostelium fasciculatum] Length = 554 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 26/86 (30%), Gaps = 7/86 (8%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMS 100 R+ + E + K+ + +A + F + + P + +S Sbjct: 354 KRERDEREYINPEKSAEAKNQGNEHFKKGEYPEAIKCFEEAIKRNPSDHTIYSNRSA--- 410 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPE 126 G+Y A E+ I P Sbjct: 411 --CYSKLGEYPLAVKDAEKVIELAPT 434 >gi|300870179|ref|YP_003785050.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] gi|300687878|gb|ADK30549.1| TPR domain protein [Brachyspira pilosicoli 95/1000] Length = 631 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 31/247 (12%), Positives = 72/247 (29%), Gaps = 49/247 (19%) Query: 61 YEKAVLFLKEQNFSKAY--------------EYFNQCSRDFPFAGVAR-KSLLMSAFVQY 105 Y+ A+ +N+ + EY ++L+ A+ + Sbjct: 22 YDDALNLYNNRNYEASISVLNSLNIKPSNINEYLLLIDNYIKLQNYTMAQTLIDDAYRYH 81 Query: 106 ---------------SAGKYQQAASLGEEYITQYPESKNVDYV---------YYLVGMSY 141 K +A + + ++ +Y YY MS Sbjct: 82 SKDYRVLERKLTIELLNNKNNEARTTINQIKALDSKNYLANYAEGVLSERVGYYKTAMSL 141 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + + + + L Y+ + N+ ++A + YY Sbjct: 142 YERAMIINRTRSEATVALAYLK-LANGDRNA--ALDLFNLNVKNNPRMAESYYNLANYYY 198 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 G Y A++ + L Y + +A Y+AL D + +++++ P+ Sbjct: 199 ITGNYNASLNEIKNALYYY---TNYNDAKILQANVYMAL---DRYNDAIAILEY-LPESS 251 Query: 262 WARYVET 268 + + Sbjct: 252 FRDDTKN 258 >gi|331268802|ref|YP_004395294.1| TPR domain-containing protein [Clostridium botulinum BKT015925] gi|329125352|gb|AEB75297.1| TPR domain protein [Clostridium botulinum BKT015925] Length = 461 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 7/77 (9%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +K L ++ + +A Y+ + P A+ V + +Y++A E I Sbjct: 76 KKGNNALDKKQYRRAILYYKKILLIEPKLTFAKN---KLGLVFFYDKQYEEAIIQFRELI 132 Query: 122 TQYPESK----NVDYVY 134 P + N+ YVY Sbjct: 133 QLNPHNSIFYNNLAYVY 149 >gi|326668250|ref|XP_002662229.2| PREDICTED: tetratricopeptide repeat protein 16-like [Danio rerio] Length = 596 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 38/122 (31%), Gaps = 15/122 (12%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + YE ++ + F KA F++ P + + A +Q A Sbjct: 26 KEKAEKHYETGIISMAHSQFDKAVSCFSKAIVLQP---HKTQFYVQRAEAYLQLCDFQSA 82 Query: 114 ASLGEEYITQYPE----SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 A + P+ + + +++YL G D L+ ++ E Sbjct: 83 ALDYKHARRLEPQTEAYHQRLAFIHYLQGQCLF--------DLGNFLEALESFTKAAELK 134 Query: 170 TN 171 + Sbjct: 135 PD 136 >gi|325183067|emb|CCA17523.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 691 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 53/158 (33%), Gaps = 25/158 (15%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 ++++KA + F ++ + A + + + P S+ Sbjct: 70 EDYTKAADCFRGLVSL---NEQNAEAWGHLGYCCLMMNDLTSAHTAYQYAMYNNPNSQKD 126 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 ++Y +G Y ++ + + + ++ N +F + + Sbjct: 127 PTLWYGIGQLYERL--------GSLEHAQESFEAVLRFEPNFNMALEVKFRLGI------ 172 Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 I + +RG+Y A+ R + VL + ++ E Sbjct: 173 -----IAK---QRGDYENALERLKSVLHDVQNSVSTSE 202 >gi|157129462|ref|XP_001655398.1| tpr repeat nuclear phosphoprotein [Aedes aegypti] gi|108872219|gb|EAT36444.1| tpr repeat nuclear phosphoprotein [Aedes aegypti] Length = 1120 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 40/110 (36%), Gaps = 18/110 (16%) Query: 158 MLQYMSRIVERYTNSPYVKGA-------RFYVTVGRNQLAA-KE---------VEIGRYY 200 L +++ + + + + R+ A +E + I Y Sbjct: 631 ALAIYKQVLRNDPKNIWAANGIGAVLAHKGCIIEARDIFAQVREATADFCDVWLNIAHIY 690 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 +++ +Y++AI ++ L + + + M L AY + EA+ + Sbjct: 691 VEQKQYISAIQMYENCLKKFYKHNNV-DVMQYLARAYFRAGKLKEAKMTL 739 >gi|332708571|ref|ZP_08428545.1| hypothetical protein LYNGBM3L_27110 [Lyngbya majuscula 3L] gi|332352668|gb|EGJ32234.1| hypothetical protein LYNGBM3L_27110 [Lyngbya majuscula 3L] Length = 917 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 19/59 (32%), Gaps = 7/59 (11%) Query: 62 EKAVLFLKEQNFSKAYEYFN-----QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + +++ KA +Y+ +P SL Y G Y++A Sbjct: 286 NLGNAYYHLKDYKKAIDYYQQYLAIARENQYPRGK--ANSLASLGNAYYHLGDYEKAID 342 >gi|330800106|ref|XP_003288080.1| hypothetical protein DICPUDRAFT_152270 [Dictyostelium purpureum] gi|325081904|gb|EGC35404.1| hypothetical protein DICPUDRAFT_152270 [Dictyostelium purpureum] Length = 2127 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 42/127 (33%), Gaps = 31/127 (24%) Query: 53 DVRYQREVYEKAVLF-----------LKEQNFSKAYEYFNQCSRDFPF------------ 89 + Y+KA+ L NF A E + +F F Sbjct: 1737 HDETPLQFYDKALNLETRTKNLASIHLNIGNFYLANEKITEAKNEF-FKSLHHSEQESEK 1795 Query: 90 -AGVARKSLLMSAFVQYSAGKYQQAA----SLGEEYITQY--PESKNVDYVYYLVGMSYA 142 + KS+ A V+Y Y +A + + + K++ Y+++G+ Y Sbjct: 1796 NTPIYAKSIFKMALVEYKEKNYIEAIKKFETSINLFKELFKSSNHKDIGTCYHMIGLCYF 1855 Query: 143 QMIRDVP 149 Q+ + Sbjct: 1856 QLDDGID 1862 >gi|302343463|ref|YP_003807992.1| serine/threonine protein kinase [Desulfarculus baarsii DSM 2075] gi|301640076|gb|ADK85398.1| serine/threonine protein kinase [Desulfarculus baarsii DSM 2075] Length = 842 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 16/32 (50%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 +E+ + V F E + +A E F + + +P Sbjct: 655 PQELLVEGVRFFNEGKYQRAVENFEKVAAVYP 686 >gi|116327132|ref|YP_796852.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332211|ref|YP_801929.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116119876|gb|ABJ77919.1| Conserved hypothetical protein with tetratricopeptide repeat domain [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125900|gb|ABJ77171.1| Conserved hypothetical protein with tetratricopeptide repeat domain [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 378 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 8/70 (11%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSA--FVQYSAG 108 Q ++ K ++ K + KA F + S +P + V RK+ L + Y Sbjct: 304 QTALFRKGTIYFKSGKYEKAAALFQEASDRYPDSPVGRKASAWKKESLDQIEDNLHYKES 363 Query: 109 KYQQAASLGE 118 ++ E Sbjct: 364 DKAKSKEDLE 373 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 13/130 (10%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGEEY 120 EKA + + A + F + + A ++L A + GK A Sbjct: 236 EKARQLYVRKQYYGAIDTFKKALEMG-ISPKAEEQALFYIAESYEAVGKSDSALQYLNRV 294 Query: 121 ITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + + ++D + G Y + + +RY +SP + A Sbjct: 295 LGN--QDGSLDQTALFRKGTIYFKS--------GKYEKAAALFQEASDRYPDSPVGRKAS 344 Query: 180 FYVTVGRNQL 189 + +Q+ Sbjct: 345 AWKKESLDQI 354 >gi|59809017|gb|AAH89446.1| P4HA3 protein [Homo sapiens] Length = 528 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 9/80 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQ 111 ++ + ++ A + + F + +L AF + AG Sbjct: 169 FQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEYEASLEDALDHLAFAYFRAGNVS 228 Query: 112 QAASLGEEYITQYPESKNVD 131 A SL E++ P++K + Sbjct: 229 CALSLSREFLLYSPDNKRMA 248 >gi|57530548|ref|NP_001006331.1| cell division cycle protein 27 homolog [Gallus gallus] gi|53131851|emb|CAG31852.1| hypothetical protein RCJMB04_12e16 [Gallus gallus] Length = 833 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 51/196 (26%), Gaps = 50/196 (25%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 587 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 636 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-------YVKGARFY 181 N +Y +GM Y + Q L + + ++ S V+ A Sbjct: 637 N---AWYGLGMIYYK--------QEKFSLAEMHFQKALDINPQSSVLLCHIGVVQHALKK 685 Query: 182 VTVGRNQLAAKEVEI-----------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 + L K + I +Y +A+ + + Sbjct: 686 SEKALDTL-NKAINIDPKNPLCKFHRASVLFANEKYKSALQELEELKQIVPKESLVY--- 741 Query: 231 ARLVEAYVALALMDEA 246 + + Y L A Sbjct: 742 FLIGKVYKKLGQTHLA 757 >gi|331003852|ref|ZP_08327344.1| hypothetical protein HMPREF0491_02206 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412044|gb|EGG91441.1| hypothetical protein HMPREF0491_02206 [Lachnospiraceae oral taxon 107 str. F0167] Length = 279 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 20/99 (20%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L I A+ L G ++ +E L E +++A E F++ Sbjct: 10 LFITAIFAILLLSGCSANEKKN---------------FENGKALLDEGKYTEAVEAFDKA 54 Query: 84 SRDFPFAGVARKSLLMS----AFVQYSAGKYQQAASLGE 118 + R + A +Y AG Y+ A + Sbjct: 55 ISAH-GSKNIRGLEIDILRYRAEAEYKAGDYKAAEHTYK 92 >gi|312888884|ref|ZP_07748446.1| Tetratricopeptide TPR_2 repeat protein [Mucilaginibacter paludis DSM 18603] gi|311298625|gb|EFQ75732.1| Tetratricopeptide TPR_2 repeat protein [Mucilaginibacter paludis DSM 18603] Length = 345 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 12/123 (9%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + ++ ++ V + ++ A FN+ + P G A AF Y+ K Sbjct: 23 AQNNNTANDLIKQGVDLHNQGKYADAIAQFNEVLKTEPQNGYAN---YEMAFSLYALKKT 79 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + A E+ + S NV Y L+ Y + + + + ++ Sbjct: 80 KDAIPHLEKAVQSNNASLNVA-AYCLLANIYDEDNQH--------QKAIDTYKTGIKINP 130 Query: 171 NSP 173 + P Sbjct: 131 DYP 133 >gi|303250431|ref|ZP_07336629.1| hypothetical protein APP6_1846 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252216|ref|ZP_07534113.1| UDP-N-acetylglucosamine-peptide-n- acetylglucosaminyltransferase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650757|gb|EFL80915.1| hypothetical protein APP6_1846 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860138|gb|EFM92154.1| UDP-N-acetylglucosamine-peptide-n- acetylglucosaminyltransferase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 457 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 55/156 (35%), Gaps = 30/156 (19%) Query: 59 EVYEKAVLFL-----KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 EVY +A + L ++ F +A FN SR+ A + + G+ +A Sbjct: 181 EVYVRAQINLGITLGEQGKFDEAIAAFNNVSREDSTELYAI-AQVNLGITLRKQGRGDEA 239 Query: 114 ASLGEEYITQYPESKNVD--Y--VYYLVGMSYAQMIRDVPYDQRATKLMLQY--MSRIVE 167 + ++ Y V +L+G+ + + + +S VE Sbjct: 240 IVAY-----RNVNREDSAKLYVKVQFLLGLIFESQDK-----LDEARDAFNNIRLSDSVE 289 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 Y A+ Y+ V + KE+ I + + R Sbjct: 290 LY------TKAQVYLKVLN--IGKKEIRISLFNIHR 317 >gi|300857193|ref|YP_003782177.1| TPR-repeat-containing protein [Clostridium ljungdahlii DSM 13528] gi|300437308|gb|ADK17075.1| TPR-repeat-containing protein [Clostridium ljungdahlii DSM 13528] Length = 410 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 23/121 (19%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG----VARKSLLMSAFVQYSAGKYQQAASL 116 Y+ +L ++++ A Y + + F A + M A S+G + A + Sbjct: 295 YKLGTNYLNSKDYNNAKAYLTKA---YEFGSENYLYA-DIIYMLATTLDSSGDTKNAINY 350 Query: 117 GEEYITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 +Y + DY V Y + + Y + +Y +V++Y NS Sbjct: 351 YIQYDK---GFSDGDYEETVLYRLAVIYKDTDKS---------QAKKYAQSLVDKYPNSI 398 Query: 174 Y 174 Y Sbjct: 399 Y 399 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 40/109 (36%), Gaps = 7/109 (6%) Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL------KRGEYVAAIPRF 213 Y ++ Y NS A+ Y+T + + Y+ G+ AI + Sbjct: 292 AYFYKLGTNYLNSKDYNNAKAYLTKAYEFGSENYLYADIIYMLATTLDSSGDTKNAINYY 351 Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 +SD ++ E + RL Y +A++ + ++YP + Sbjct: 352 IQYDKGFSDGDYEETVLYRLAVIYKDTD-KSQAKKYAQSLVDKYPNSIY 399 >gi|289192976|ref|YP_003458917.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus sp. FS406-22] gi|288939426|gb|ADC70181.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus sp. FS406-22] Length = 284 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 37/88 (42%), Gaps = 5/88 (5%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91 L+ + S + L +++R ++ ++ L+ + F +A + F++ PF Sbjct: 192 ILISLNKLSEAIITLKRASEIRPDDVGVLFNLGLVHLRLKEFKEAIDAFDKVLERNPFHL 251 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEE 119 AR L A G+ +A + +E Sbjct: 252 GAR---LGKAIAYEKLGELDKALKIYDE 276 >gi|260463813|ref|ZP_05812010.1| Tetratricopeptide TPR_2 repeat protein [Mesorhizobium opportunistum WSM2075] gi|259030410|gb|EEW31689.1| Tetratricopeptide TPR_2 repeat protein [Mesorhizobium opportunistum WSM2075] Length = 1372 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 31/108 (28%), Gaps = 28/108 (25%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-VAR----------------- 94 D + Y + + +++S A F+Q R +P A Sbjct: 929 DAKDAPSYYGRGIERADSKDYSGAIADFDQAIRLYPGNPDYAVARKAAVAALKKGGAAPL 988 Query: 95 ---------KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 ++ + Y KY +A + I P K YV Sbjct: 989 AVGSDPRNLQAFMDRGNAFYGKRKYDRAIAEYSRAIALDPR-KASAYV 1035 Score = 35.9 bits (82), Expect = 6.0, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 49/171 (28%), Gaps = 23/171 (13%) Query: 30 IAVCFLVGWERQSSRDV--YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 IA+ + + V + + + K ++ ++ A + + F Sbjct: 1141 IAMAAKANASKMPGKAVGEAPAKPSSASPAAQAFSKGWTLHEKNDYDGAIALYGKAIAFF 1200 Query: 88 P-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 P F + L A + Y A + + I P + +Y + Sbjct: 1201 PAFHD----AYLARAMAWEAKRDYAHAVADYSQAIALNPN----------LAETYYDRGQ 1246 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 ++ + Q L + + S + A+ Y G + E Sbjct: 1247 NLGF-QGDYDGALADYDKAI-----SLNTRDAKVYADRGLIWMGRHEDAAA 1291 >gi|302915463|ref|XP_003051542.1| hypothetical protein NECHADRAFT_99925 [Nectria haematococca mpVI 77-13-4] gi|256732481|gb|EEU45829.1| hypothetical protein NECHADRAFT_99925 [Nectria haematococca mpVI 77-13-4] Length = 880 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 36/145 (24%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL----------MSA 101 D + + Y ++ +Q + KAYE + ++++ Sbjct: 293 ADNQDAQSWYLLGRCYMSQQKYPKAYEAY-------------QQAVYRDGKNPTFWCSIG 339 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + Y +Y+ A I P + V+Y +G + + + D L Sbjct: 340 VLYYQINQYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQITD------ALDA 389 Query: 162 MSRIVERYTNSPYVKGARFYVTVGR 186 R E +P++ + + + R Sbjct: 390 YQRAAELDPGNPHI---KARLQLLR 411 >gi|221503955|gb|EEE29632.1| tetratricopeptide repeat protein, tpr, putative [Toxoplasma gondii VEG] Length = 608 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 44/180 (24%) Query: 49 DSVTDVRYQREVY--EKAVLFLKEQNFSKA-YEYFNQCSRDFP----FAGVARKSLLMSA 101 D + +Y KA ++++ ++ K E + + F+ VA K A Sbjct: 268 DEAIEKNPNEILYLNNKAAVYMELGDYDKCLAECQKALDKRYECKADFSKVA-KVYCRMA 326 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + +G Y A Y + R T+ L Sbjct: 327 ACKTRSGDYSGAI------------------AMYEKALCEDNN--------RMTRNALNE 360 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + + +K + LA + E G Y K+G+Y AA + + Sbjct: 361 VKK----------LKEKKEKEDYINPALAEQHREKGNEYFKQGDYPAAKKEYDEAIRRNP 410 >gi|115963479|ref|XP_001196739.1| PREDICTED: similar to MGC80272 protein, partial [Strongylocentrotus purpuratus] Length = 1749 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 55/193 (28%), Gaps = 47/193 (24%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 +KE + A +Q ++ P + A SLL + + Y AA E+ +P Sbjct: 1121 QIKEGKYIDAIHILSQELQNHPRSR-AALSLL--GYCYFHVQDYANAAECYEQLSQFFP- 1176 Query: 127 SKNVD-------YVYY--------LVG---MSYAQMIRDVPYDQRATKLMLQYM---SRI 165 VD Y + + + + Q A K + + + Sbjct: 1177 --EVDTYRLYYAQALYHACAYPEAMKATFQVENQEYQPKITKLQAAIKYGEEDLPGAKSL 1234 Query: 166 VERYTN----------------SPYVKGARFYVTVGRNQL---AAKEVEIGRYYLKRGEY 206 VE+ N Y + A T + A I Y +Y Sbjct: 1235 VEQCPNDDPDTEVNLGCLLFKEGRY-EQACQKFTTAMQIMGYRADLAYNIALCYYSMKQY 1293 Query: 207 VAAIPRFQLVLAN 219 A+ ++ Sbjct: 1294 APALRNIAEIIER 1306 >gi|6456747|gb|AAF09252.1|AF200703_1 putative hemolysin [Leptospira borgpetersenii] Length = 378 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 8/70 (11%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------LLMSA--FVQYSAG 108 Q ++ K ++ K + KA F + S +P + V RK+ L + Y Sbjct: 304 QTALFRKGTIYFKSGKYEKAAALFQEASDRYPDSPVGRKASAWKKESLDQIEDNLHYKES 363 Query: 109 KYQQAASLGE 118 ++ E Sbjct: 364 DKAKSKEDLE 373 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 13/130 (10%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGEEY 120 EKA + + A + F + + A ++L A + GK A Sbjct: 236 EKARQLYVRKQYYGAIDTFKKALEMG-ISPKAEEQALFYIAESYEAVGKSDSALQYLNRV 294 Query: 121 ITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + + ++D + G Y + + +RY +SP + A Sbjct: 295 LGN--QDGSLDQTALFRKGTIYFKS--------GKYEKAAALFQEASDRYPDSPVGRKAS 344 Query: 180 FYVTVGRNQL 189 + +Q+ Sbjct: 345 AWKKESLDQI 354 >gi|163846558|ref|YP_001634602.1| lytic transglycosylase catalytic [Chloroflexus aurantiacus J-10-fl] gi|222524349|ref|YP_002568820.1| Lytic transglycosylase catalytic [Chloroflexus sp. Y-400-fl] gi|163667847|gb|ABY34213.1| Lytic transglycosylase catalytic [Chloroflexus aurantiacus J-10-fl] gi|222448228|gb|ACM52494.1| Lytic transglycosylase catalytic [Chloroflexus sp. Y-400-fl] Length = 778 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 43/134 (32%), Gaps = 8/134 (5%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + + ++ + +F+ A P + AR++ L +G + Sbjct: 314 EQNPGEALRQRGLARRALGDFAGALADLAAAREREPDSDTARQAALDWIQTYGQSGATAE 373 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 AA+L +Y P+ + + A + D D A + +RY + Sbjct: 374 AAALYRQYADDQPDDPRAP-----IALDRAAQLYDRLGDSAA---ATATRLELGQRYPTT 425 Query: 173 PYVKGARFYVTVGR 186 A + + R Sbjct: 426 TVGLTALHRIALAR 439 >gi|326934011|ref|XP_003213090.1| PREDICTED: cell division cycle protein 27 homolog [Meleagris gallopavo] Length = 882 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 51/196 (26%), Gaps = 50/196 (25%) Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAASLGEEYITQYPESK 128 A ++F + A + A+ G + +A + I P Sbjct: 636 AIKFFQR----------AIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHY 685 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-------YVKGARFY 181 N +Y +GM Y + Q L + + ++ S V+ A Sbjct: 686 N---AWYGLGMIYYK--------QEKFSLAEMHFQKALDINPQSSVLLCHIGVVQHALKK 734 Query: 182 VTVGRNQLAAKEVEI-----------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 + L K + I +Y +A+ + + Sbjct: 735 SEKALDTL-NKAINIDPKNPLCKFHRASVLFANEKYKSALQELEELKQIVPKESLVY--- 790 Query: 231 ARLVEAYVALALMDEA 246 + + Y L A Sbjct: 791 FLIGKVYKKLGQTHLA 806 >gi|317407010|gb|EFV87042.1| hypothetical protein HMPREF0005_05858 [Achromobacter xylosoxidans C54] Length = 386 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 22/70 (31%), Gaps = 8/70 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y K + +++ A F+ ++ Q +Y A + ++ Sbjct: 244 YWKGRAAYEAGDYAAALTAFSALD--------TPQAHFYVGNCQTRLRQYDAALAAYDKA 295 Query: 121 ITQYPESKNV 130 + PE + Sbjct: 296 LALRPEWPDA 305 >gi|313902667|ref|ZP_07836066.1| protein serine phosphatase with GAF(s) sensor(s) [Thermaerobacter subterraneus DSM 13965] gi|313467105|gb|EFR62620.1| protein serine phosphatase with GAF(s) sensor(s) [Thermaerobacter subterraneus DSM 13965] Length = 868 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 78/224 (34%), Gaps = 31/224 (13%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR---DFPFAGVARKS-L 97 + DV D R + E+ + + E++ A F + S + A+ Sbjct: 10 PTADVNADRALHAASMRRLVERGLQAMDERDGLTALNCFQRASDMAFKYRLGAEAQAGTQ 69 Query: 98 LMSAFVQYSAGKYQQAASLGEEYIT---QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 L A G + AAS+ + + P+ + + V+ ++G + R R Sbjct: 70 LNLALAYRLIGDLEGAASVLQRLLQGDDLVPDQRAM--VWNILGTVHFASGRY-----RP 122 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA---IP 211 L R++ R YV+ R ++A + YL+ A Sbjct: 123 AAHALLRAWRLMRN----------RRYVSELRVEVAGN---LATVYLELRRPTRALTWAS 169 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 R + + H + A +L+ A +AL + A ++ ++ Sbjct: 170 RAAWQARH-AGTPHRQFATLQLIAARLALGETERAARGIARLER 212 >gi|310778302|ref|YP_003966635.1| hypothetical protein Ilyop_0499 [Ilyobacter polytropus DSM 2926] gi|309747625|gb|ADO82287.1| hypothetical protein Ilyop_0499 [Ilyobacter polytropus DSM 2926] Length = 503 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 59/157 (37%), Gaps = 26/157 (16%) Query: 44 RDVYLDSVTDVRYQREVYEKAV----------LFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 V D V ++ +RE+Y +A + +N+ +A ++ + A Sbjct: 359 SKVSEDKVHQLKKEREIYHRAKLIKKEVDLGDEKYQGENYEEAVLFYKRAEEKDIEAARK 418 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----VYYLVGMSYAQMIRDVP 149 + + Y +Y+ AA+ E+ + ES+ + YL G+ Y +M Sbjct: 419 LDTDMKIGMSYYYITRYEDAANYFEKAM----ESEKTPMKKAEIAYLTGVCYYRMQDK-- 472 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + ++ ++ + Y + + K A Y+ R Sbjct: 473 ------EKSMKTFEKLAKDYPGTTWSKKAMVYIIRLR 503 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 26/74 (35%) Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 +++IG Y Y A F+ + + E Y + +++ + Sbjct: 422 DMKIGMSYYYITRYEDAANYFEKAMESEKTPMKKAEIAYLTGVCYYRMQDKEKSMKTFEK 481 Query: 253 IQERYPQGYWARYV 266 + + YP W++ Sbjct: 482 LAKDYPGTTWSKKA 495 >gi|238495490|ref|XP_002378981.1| mitochondrial outer membrane translocase receptor (TOM70), putative [Aspergillus flavus NRRL3357] gi|220695631|gb|EED51974.1| mitochondrial outer membrane translocase receptor (TOM70), putative [Aspergillus flavus NRRL3357] Length = 638 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 47/141 (33%), Gaps = 20/141 (14%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92 +G + ++ D L + Y +A L F++A + + + R F ++ Sbjct: 398 LGNKDAAADDFELAISHNKDDADIYYHRAQLHFILGEFAEAAKDYQKSIDLDRTFIYSH- 456 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + QY G A + + + ++V VY ++ DQ Sbjct: 457 -----IQLGVTQYKMGSVASAMATFRRSVKNF---EDVPDVY--------NYYGELLLDQ 500 Query: 153 RATKLMLQYMSRIVERYTNSP 173 + ++ + VE S Sbjct: 501 QNFSEAIEKFDKAVEMEKQSK 521 >gi|170078504|ref|YP_001735142.1| TPR domain-containing protein [Synechococcus sp. PCC 7002] gi|169886173|gb|ACA99886.1| TPR domain protein [Synechococcus sp. PCC 7002] Length = 267 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 31/291 (10%), Positives = 82/291 (28%), Gaps = 69/291 (23%) Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70 + + ++ F ++ I++C+ + + + + A+ K+ Sbjct: 1 MSDLSMRPIFSFLCSLLLWISLCWPSVALTNA----------QISEGDRLTQTAIQAAKK 50 Query: 71 QNFSKAYEYFNQCSRDFPFAG--VA----RKSLLMSAFV------------------QY- 105 + A + ++ FP + ++ L + Sbjct: 51 GDLFTAEKIWSDLIEAFPQNPALWSNRGNTRASLNQFDAALDDLNEAIRLAPNQVEPYFN 110 Query: 106 ------SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 ++ +A + ++ I P+ + + Y+ G +Y + + Sbjct: 111 RGAILEQQQRFSEAIADYDKAIELDPQ-EAI--AYHNRGNAYGSL--------GNWEQAR 159 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 Q + E + + LA +V GE AI R + ++ Sbjct: 160 QDYQKATELDPRFAWAAESYA--------LALYQV---------GENNQAIQRMKGLVRK 202 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 Y A A+ ++ + + + +RY W + Sbjct: 203 YPMFADARVALTAMLWGNHQFGEAESNWVAAAGLDDRYRDLEWLEDIRRFP 253 >gi|110834719|ref|YP_693578.1| hypothetical protein ABO_1858 [Alcanivorax borkumensis SK2] gi|110647830|emb|CAL17306.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 207 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 7/98 (7%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY--EYF 80 A I +AV L+GW R+ + Y+ V L Q +A + Sbjct: 21 ATIITVVLAVAALIGW-----REWQDHQGEQSAEASKHYQVMVEALTAQEVDEATVNQKA 75 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +FP + A + L A + AG Y+ AASL + Sbjct: 76 EALKENFPGSAYANYANLAQARLAVQAGDYESAASLLQ 113 >gi|94971671|ref|YP_593719.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94553721|gb|ABF43645.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 349 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 19/154 (12%), Positives = 43/154 (27%), Gaps = 35/154 (22%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARK-----------------SLLMSA 101 A +L + + A + + + P A+ + L A Sbjct: 182 ADAYLGAKRYPDAVKAYEKAIALDPSKAPVHNNYAQALAKTGQSDKAIAEYDAAAKLDPA 241 Query: 102 FV---QYS-------AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 ++ AGK A + ++ I YY G++ Sbjct: 242 HAGSFYFNEGAVLTNAGKTDDANAAFDKAIA---ADPTKADAYYQKGVNLMGKATQKDGK 298 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 A ++ ++ +E + P + A+ + Sbjct: 299 YVAAPGTVEAFNKYLELSPDGPNAQNAKDMIAAL 332 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 11/79 (13%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++A ++ +NF A + + + A A A +Y A E+ Sbjct: 146 KEAQADMQAKNFDAAIQIMEKATAQDATHDIIWAV-----LADAYLGAKRYPDAVKAYEK 200 Query: 120 YITQYPE----SKNVDYVY 134 I P N Sbjct: 201 AIALDPSKAPVHNNYAQAL 219 >gi|17229312|ref|NP_485860.1| hypothetical protein all1820 [Nostoc sp. PCC 7120] gi|17130910|dbj|BAB73519.1| all1820 [Nostoc sp. PCC 7120] Length = 1009 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 82/261 (31%), Gaps = 70/261 (26%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEK--AVLFLKE--QNFSKA 76 LT+ ++A L ++ + +V + + +Y+ V L+ +NF +A Sbjct: 6 IPLTLILTLASPSLAQAPTPTTEEQITQAVMLNSSGESLIYKDFFGVGELQAALENFQQA 65 Query: 77 YEYFNQCSRDFPFAGVARKS--LLMSAFVQYSAGKYQQAASLGE------EYITQYPESK 128 F + + A ++ L+ +V + +Y +A + I +++ Sbjct: 66 LAIFKK------YGAKAGEANSLVNIGYVYFRKAEYGKALEYFQSSLDIRRKIKD-RQNE 118 Query: 129 NVD-------YV---YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + YV Y + Y Q L + + NS A Sbjct: 119 WIPLSYIGEVYVNLGQYPKALEYYQ-------------PALAIIKELKAA--NSKDSSYA 163 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA--------- 229 T+ + IG Y + G+Y A L Y ++A Sbjct: 164 TSEKTLLAD--------IGAVYFRMGQYTKA-------LDFYQQTLAMQKADDDKIGGIQ 208 Query: 230 -MARLVEAYVALALMDEAREV 249 + + YV L +A + Sbjct: 209 TLNNIGVVYVNLGNYKQALDA 229 >gi|330952763|gb|EGH53023.1| TPR repeat-containing von Willebrand factor, type A [Pseudomonas syringae Cit 7] Length = 572 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 22/170 (12%), Positives = 50/170 (29%), Gaps = 34/170 (20%) Query: 8 AICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY----EK 63 + + WA Q + L + F A+ GW + ++++ ++ Sbjct: 299 QVVQLDTWADQGHWLLLPLIFIAALAGRRGWLFCLPLIFMFPQNSQAFEFQDLWLRPDQQ 358 Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 L++ ++A + F + Y A Y A ++ Sbjct: 359 GQRLLEQHRPAEAAQRFED-------SRW-------KGVALYQAQDYASA---ARQFAE- 400 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + D +Y G + A+ L + ++R + P Sbjct: 401 --GNSAAD--HYNRGNALARN--------GELAAALDAYEQALDRQPDFP 438 >gi|157384230|gb|ABV49466.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 23 [Homo sapiens] Length = 1052 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLXVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|301609916|ref|XP_002934497.1| PREDICTED: tetratricopeptide repeat protein 13 [Xenopus (Silurana) tropicalis] Length = 839 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 70/234 (29%), Gaps = 52/234 (22%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP------FAG---VARKSLLMSAFV 103 D E+ + + +A ++F+ ++ P + ARK L Sbjct: 120 DDDTNEEL-AIGYVLIGSGLQDEAIKHFSSMLQEEPDLVSAIYGRGIAYARKGLQDI--- 175 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + A I+ P+ V + ++ L ++ Sbjct: 176 ----KNAELALFELSRVISLEPDHPEV-----------FEQRAEILSPLGRISEALSDLT 220 Query: 164 RIVERYTNSP-YVKGARFYVTVGRNQLAAKE----------------VEIGRYYLKRGEY 206 R ++ ++ Y + + LAA+E + G + RG Sbjct: 221 RAIQLQPSARLYRHRGTLHFI-SEDYLAAQEDFQRSLGLNQNQPIAVLYKGLTFFHRGLL 279 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS---LIQERY 257 AI F+ L + EA L +AY L + A E ++ + + Sbjct: 280 KEAIDSFKEALK--QKSNFI-EAYKSLGQAYRELGNFEAAMENFQKALMLNQNH 330 >gi|183179365|ref|ZP_02957576.1| GGDEF family protein [Vibrio cholerae MZO-3] gi|183012776|gb|EDT88076.1| GGDEF family protein [Vibrio cholerae MZO-3] Length = 667 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100 D+ L + D +Y L + + A +Y N+ + + Sbjct: 215 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 274 Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + G+Y+++ E+ + P + + YV+ +G +Y ++ V DQ Sbjct: 275 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYVELNNFVEGDQ-HLF 332 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L+Y++ + + LA + K +Y AI Sbjct: 333 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 374 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A S++ +AY+ LA + EA + Sbjct: 375 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 402 >gi|91215455|ref|ZP_01252426.1| TPR domain protein [Psychroflexus torquis ATCC 700755] gi|91186407|gb|EAS72779.1| TPR domain protein [Psychroflexus torquis ATCC 700755] Length = 842 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 23/136 (16%) Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + D + L+G + R VP S I+ Y S + A+ +V Sbjct: 114 NPQTDEAFLLLGKARYYDQRFVP--------AKDAFSFILNHYPESSTINEAKIWVEKVN 165 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE-HAEEAMARLVEAYVALALMDE 245 +L E+ AI ++ + EA + L +AY+A + Sbjct: 166 LRLEYFEM--------------AIDNLTELINTTQLTPLESYEATSTLAQAYIADNKQRQ 211 Query: 246 AREVVSLIQERYPQGY 261 A + + + P Sbjct: 212 ALSPLKIAIQNAPDDE 227 >gi|88803527|ref|ZP_01119052.1| TPR-domain containing protein [Polaribacter irgensii 23-P] gi|88780539|gb|EAR11719.1| TPR-domain containing protein [Polaribacter irgensii 23-P] Length = 993 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 75/217 (34%), Gaps = 27/217 (12%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYS 106 S T +R Y +A + Q + +A + F S +A + L A + + Sbjct: 438 KSTTKKIKERSGYWEAETLYRMQKYQEALDGFLSLSTAKKSKEIADFADLSYAIGYSYFK 497 Query: 107 AGKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +YQ A + ++ S + + + +G S + K + +++ Sbjct: 498 LEEYQNAGNYFTAFLEIKTISDALKFDAFLRLGDSNFAL--------GKYKEAIASYTKV 549 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 V+ Y A A +IG Y A I + V+ S++ Sbjct: 550 VD-----KYGLDA-----------AYASYQIGMSYGFTTNQKAKITALKKVINAGSNSNL 593 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 ++A+ L Y L A +L+ + +P+ + Sbjct: 594 KDDALYELGNTYSKLKEEGNAHFYYNLLLKNHPKSIF 630 >gi|46124601|ref|XP_386854.1| hypothetical protein FG06678.1 [Gibberella zeae PH-1] Length = 698 Score = 37.4 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 3/71 (4%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 ++T F KE+N+ KA E +++ FPF+ L A S G Sbjct: 188 PTITPEEDAESYKNAGNRFFKEKNYYKAIEQYSKAVDLFPFSA---TYLGNRAAAYMSNG 244 Query: 109 KYQQAASLGEE 119 +++ A Sbjct: 245 QFEHALDDCSR 255 >gi|332665963|ref|YP_004448751.1| hypothetical protein Halhy_4030 [Haliscomenobacter hydrossis DSM 1100] gi|332334777|gb|AEE51878.1| Tetratricopeptide TPR_2 repeat-containing protein [Haliscomenobacter hydrossis DSM 1100] Length = 604 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 47/133 (35%), Gaps = 5/133 (3%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 E Y +A + + + F++A+ + ++P + + A V Y QA Sbjct: 472 TATALEYYAEADMLIFQNRFTEAFSKLDSLIVEYPNHSLEDDVWYLKAKVFTKKRDYAQA 531 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + + I YP+ D + + Y + + + + ++ ++ S Sbjct: 532 GKMYQMIIDNYPDEIRADNSIFALAELYENVNQLNDK-----EKASKLFEKLFIDFSGST 586 Query: 174 YVKGARFYVTVGR 186 + AR + R Sbjct: 587 FAVEARKRYRLLR 599 Score = 35.9 bits (82), Expect = 6.2, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 38/108 (35%), Gaps = 14/108 (12%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q + ++ Y N + + + K+ +Y A Sbjct: 488 QNRFTEAFSKLDSLIVEYPNHSLEDDV----WYLK----------AKVFTKKRDYAQAGK 533 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 +Q+++ NY D A+ ++ L E Y + +++ + L ++ + Sbjct: 534 MYQMIIDNYPDEIRADNSIFALAELYENVNQLNDKEKASKLFEKLFID 581 >gi|325473179|gb|EGC76375.1| TPR domain-containing protein [Treponema denticola F0402] Length = 629 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 72/218 (33%), Gaps = 44/218 (20%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLM 99 + ++ + + + + V FLK N + A F++ S P + K L Sbjct: 144 AKQNADAKTRAQMEEVDRLVSEGVNFLKNGNLNSALSSFSKASSKMPDSETSFTAKKYLD 203 Query: 100 SA-----FVQYS--AGKYQQAASLGEEYITQYPESKNVD----YVYYLVGMSYAQMIRDV 148 A + G ++A S + YI +S N D +Y+ I D Sbjct: 204 MASALNDYASAREGTGDAEKALSDADSYIK---KSVNADGQNARAHYV-----YSQIADA 255 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 Q+ ++ + + + N L E+ G+ Y RG Y Sbjct: 256 ---QKQPQVAFVELEKAQSLDPD---------------NYLYNYEL--GKKYYARGHYQK 295 Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 A F+ + + + A L + L L +EA Sbjct: 296 AKTSFERSVKSNPK---FDNAFFNLGMSCRKLGLENEA 330 >gi|300864617|ref|ZP_07109475.1| TPR repeat protein [Oscillatoria sp. PCC 6506] gi|300337366|emb|CBN54623.1| TPR repeat protein [Oscillatoria sp. PCC 6506] Length = 561 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 44/128 (34%), Gaps = 20/128 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + L +++A F + + P ++ A +Y ++ S + Sbjct: 170 YRQGCTLLHGDRYAEAVAAFERVVKLQPGNA---EAWFYRGLALMKALRYAESVSSYDRA 226 Query: 121 ITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-NSP---YV 175 + PE+ Y ++ G++ ++ R + R+++ +S Y Sbjct: 227 VQLQPEN----YQAWFNRGIALEKLHRYA--------EAVNSYDRVIQLQPGDSEAWFYK 274 Query: 176 KGARFYVT 183 A ++ Sbjct: 275 GMALKHLR 282 >gi|254569410|ref|XP_002491815.1| Component (70 kDa) of the TOM (translocase of outer membrane) complex [Pichia pastoris GS115] gi|238031612|emb|CAY69535.1| Component (70 kDa) of the TOM (translocase of outer membrane) complex [Pichia pastoris GS115] gi|328351685|emb|CCA38084.1| similar to outer mitochondrial membrane translocase [Pichia pastoris CBS 7435] Length = 605 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 9/78 (11%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 Y++ L + + A E F C R P + + A + Y GK ++A Sbjct: 382 PDIYYQRGQLSYLRGDLANASENFETCKRLNPKNVY---AYIQLACISYREGKIEEAV-- 436 Query: 117 GEEYI---TQYPESKNVD 131 E ++ +P S V Sbjct: 437 -ERFVQAKRTFPTSPEVP 453 >gi|262196972|ref|YP_003268181.1| hypothetical protein Hoch_3788 [Haliangium ochraceum DSM 14365] gi|262080319|gb|ACY16288.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM 14365] Length = 360 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++ + ++E+N+++A E F P + +LL + G+ A + Sbjct: 50 LFNQGRALMQERNYAEACEKFAASHELDP----SVGALLNLGDCREKNGQTATAWATY 103 >gi|195998540|ref|XP_002109138.1| hypothetical protein TRIADDRAFT_52860 [Trichoplax adhaerens] gi|190587262|gb|EDV27304.1| hypothetical protein TRIADDRAFT_52860 [Trichoplax adhaerens] Length = 753 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 70/218 (32%), Gaps = 57/218 (26%) Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP-----ESKNVDYV 133 Y + S P +A K ++ + + G Y QA ++ ++ + Y + N+ V Sbjct: 383 YLEKLSDKHP--NLA-KVYIILGNIYHDHGNYLQALNMYQKSLQIYRLVYDYDHPNIATV 439 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 Y + Y Q Q ++ ++ Y + + +A Sbjct: 440 YKKIATIYYQ--------QEKYDNAFFELTAALKIY---------QQMLDKDHPLIADLH 482 Query: 194 VEIGRYYLKRGEYVAAI----------------------PRFQLVLANYSDAEHAEEAMA 231 EIGR Y K+G++ AI F+ + Y ++A+ Sbjct: 483 NEIGRIYAKQGKFDDAISVCRKSLQIILNQMGKKHKYAAKTFEYLAIAYYTTSQYDKALP 542 Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQ-GYWARYVET 268 + +A L L E +P+ + + Sbjct: 543 KYEKAVSIL---------FDLFGENHPEISRLYKDIAN 571 >gi|170288582|ref|YP_001738820.1| TPR repeat-containing protein [Thermotoga sp. RQ2] gi|170176085|gb|ACB09137.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga sp. RQ2] Length = 272 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 1/68 (1%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQ 112 V ++Y A+ E ++ +A E F R+ P L Y+ G Y++ Sbjct: 11 VSVANDLYSNALSAYLEGDYRRALELFENALREDPTIEERDSLVKLKMGICAYAIGDYEK 70 Query: 113 AASLGEEY 120 A + + Sbjct: 71 ARAYLSNF 78 >gi|229586478|ref|YP_002844979.1| hypothetical protein RAF_ORF0290 [Rickettsia africae ESF-5] gi|228021528|gb|ACP53236.1| Unknown [Rickettsia africae ESF-5] Length = 245 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 18/46 (39%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A Y K +A + +I +YP S + Y+ G + + Sbjct: 122 DLALAAYKDNKLTEAKDKFKHFIQKYPNSLLISNAYFWYGECFFKQ 167 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 15/133 (11%), Positives = 45/133 (33%), Gaps = 12/133 (9%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D+ ++ Y+ A+ K+ ++A + F + +P + + + + Y Sbjct: 113 DIAPDKQAYDLALAAYKDNKLTEAKDKFKHFIQKYPNSLLISNAYFWYGECFFKQKDYNG 172 Query: 113 AASLG-EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 AA + Y P+ + +S ++ + T+ +++ + + Sbjct: 173 AAVNYLKGYKEL-PKGAKSSDGLLKLALSLGEL--------KKTQEACNMLAKFDKEFPT 223 Query: 172 SPYVKGARFYVTV 184 + A + Sbjct: 224 NR--TAASKKMAE 234 >gi|197124861|ref|YP_002136812.1| hypothetical protein AnaeK_4481 [Anaeromyxobacter sp. K] gi|196174710|gb|ACG75683.1| conserved hypothetical protein [Anaeromyxobacter sp. K] Length = 291 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 38/128 (29%), Gaps = 25/128 (19%) Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ-RATKLMLQY 161 G YQ A + I+ +P G + D+ D+ + Sbjct: 78 SYLELGDYQSALAYYRRIISLHPGGPEAHEA---RG-----RLGDIFRDRYGDHLAAITQ 129 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + + +SP ++E+ YL + A +++ + Sbjct: 130 YADVAGS--DSPDAP--------------RYQLEVAHEYLALKRWEQARTEARILREKWP 173 Query: 222 DAEHAEEA 229 E A+EA Sbjct: 174 THELADEA 181 >gi|148237288|ref|NP_001084796.1| hypothetical protein LOC431836 [Xenopus laevis] gi|118835718|gb|AAI28925.1| LOC431836 protein [Xenopus laevis] Length = 495 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 28/188 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 E L ++A +++ P + +++ + A GK++ A Sbjct: 42 EMGRKLLAAGQLAEALTHYHAAVDGDPNNYLTYYKRAAVYLA-----MGKFRSALPDLSR 96 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I P+ ++ ++ Q + Q +++ + + Sbjct: 97 AIQLKPDF-----------LAARLQRGNILLKQGDVQEARQDFLSVLQSSPTNEEAQSQL 145 Query: 180 FYVTVG-RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 V RN A E +R +Y AI + V+ + A E Y+ Sbjct: 146 ERVQEVERNVGGASEAY------ERRDYYGAIALLEKVIEF---SPWDPSARELRAECYL 196 Query: 239 ALALMDEA 246 + + A Sbjct: 197 QVGELSNA 204 >gi|62739321|gb|AAH94088.1| LOC431836 protein [Xenopus laevis] Length = 511 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 28/188 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 E L ++A +++ P + +++ + A GK++ A Sbjct: 58 EMGRKLLAAGQLAEALTHYHAAVDGDPNNYLTYYKRAAVYLA-----MGKFRSALPDLSR 112 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I P+ ++ ++ Q + Q +++ + + Sbjct: 113 AIQLKPDF-----------LAARLQRGNILLKQGDVQEARQDFLSVLQSSPTNEEAQSQL 161 Query: 180 FYVTVG-RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 V RN A E +R +Y AI + V+ + A E Y+ Sbjct: 162 ERVQEVERNVGGASEAY------ERRDYYGAIALLEKVIEF---SPWDPSARELRAECYL 212 Query: 239 ALALMDEA 246 + + A Sbjct: 213 QVGELSNA 220 >gi|119357879|ref|YP_912523.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119355228|gb|ABL66099.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides DSM 266] Length = 201 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 33/164 (20%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + + +Y +A + + P+ + V + V ++Q+ Sbjct: 53 ASIKLGTAYARNRQYAEADKAFTDALALDPKIEEV-----------YAALGAVAFNQKKY 101 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 L+Y + + RN ++G YL+ +Y AI ++ Sbjct: 102 DRALKYFNTYRSFSPD-----------DSLRN------YDVGNVYLQMKKYEPAIAAYRK 144 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI--QERY 257 +AN + EEA L Y DEA E+ + + + Y Sbjct: 145 AIAN---STAFEEAYYNLGFCYARSGRNDEAVEIYNWLVSKNNY 185 Score = 35.9 bits (82), Expect = 6.0, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 39/106 (36%), Gaps = 7/106 (6%) Query: 43 SRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 + + D++ EVY + ++ + +A +YFN F+ Sbjct: 70 ADKAFTDALALDPKIEEVYAALGAVAFNQKKYDRALKYFNTYRS---FSPDDSLRNYDVG 126 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 V KY+ A + + I S + YY +G YA+ R+ Sbjct: 127 NVYLQMKKYEPAIAAYRKAIA---NSTAFEEAYYNLGFCYARSGRN 169 >gi|332828713|gb|EGK01405.1| hypothetical protein HMPREF9455_02238 [Dysgonomonas gadei ATCC BAA-286] Length = 274 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 38/120 (31%), Gaps = 15/120 (12%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK----AVLFLKEQNFS 74 + + L+ F A+ + Q S V DS+ + ++ E A + E +F Sbjct: 1 MKRIILSCLFIFAIYSVA--YAQDSISVVSDSLAIAKVSQQQSETSSDPATIAYNEGDFR 58 Query: 75 KAYEYFNQ-----CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 KA E + + + + + A E+ + P ++ Sbjct: 59 KAIEILEAQKTEQLEK----GLESAQLYYNLGNAYFRVNDFAHARLNYEKALLLDPGDRD 114 >gi|309792802|ref|ZP_07687245.1| protein kinase [Oscillochloris trichoides DG6] gi|308225166|gb|EFO78951.1| protein kinase [Oscillochloris trichoides DG6] Length = 846 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 39/117 (33%), Gaps = 17/117 (14%) Query: 71 QNFSKAYEYFNQCSRDFPFAG--VARKSLLMS---AFVQYSAGKYQQAASLGEEYITQYP 125 N +A + P +A ++ L + +QA + E + P Sbjct: 446 GNADEALRIYTAALDRNPDNPALLAARAQLYIWWDVYTY-----TEQARADIEAALALDP 500 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + YV + A++I D ++ + LQ + R +E N A + Sbjct: 501 QH-APAYV------ARAELIAMTTEDDQSHRQALQDLDRAIELDPNLMAAYIAHARL 550 >gi|86211235|gb|ABC87284.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 29 [Homo sapiens] Length = 1095 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKGAYEQLLQT 231 >gi|194761720|ref|XP_001963076.1| GF14122 [Drosophila ananassae] gi|190616773|gb|EDV32297.1| GF14122 [Drosophila ananassae] Length = 1305 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 32/90 (35%), Gaps = 11/90 (12%) Query: 109 KYQQAASLGEEYITQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y +A S ++Y+ + ++ + Y +G++Y ++ R K ++ ++ Sbjct: 127 EYSEALSAYQKYLRFRENNYWTNHAFIYGIGVAYFKL--------RCFKWAIKSFQELLY 178 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 N + + E I Sbjct: 179 LSPNFTCANEVHLRLGLMLKHCG--EFHIA 206 >gi|163750973|ref|ZP_02158205.1| hypothetical protein KT99_07538 [Shewanella benthica KT99] gi|161329263|gb|EDQ00261.1| hypothetical protein KT99_07538 [Shewanella benthica KT99] Length = 404 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 8/54 (14%), Positives = 16/54 (29%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 A L+ +++ A ++ M + Y +YQ A Sbjct: 101 NLANAQLQAEHYQAAINTLEPLDLSDNDRSFQSQAHYMQGYAYYQLSQYQAALD 154 >gi|154282041|ref|XP_001541833.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150412012|gb|EDN07400.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 978 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 44/143 (30%), Gaps = 22/143 (15%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108 D + Y ++ + + KAYE + Q P + Y Sbjct: 333 ADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 386 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y+ A I P + V+Y +G + + + D L R + Sbjct: 387 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQTND------ALDAYRRAADL 436 Query: 169 YTNSPYVKGARFYVTVGRNQLAA 191 + ++ + + + ++ A Sbjct: 437 DPTNTHI---KSRLQLLQSGQAG 456 >gi|78223606|ref|YP_385353.1| tetratricopeptide TPR_4 [Geobacter metallireducens GS-15] gi|78194861|gb|ABB32628.1| Tetratricopeptide TPR_4 [Geobacter metallireducens GS-15] Length = 267 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 61/184 (33%), Gaps = 34/184 (18%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 +E A + + + + P +L +++ G+Y++A + + + Sbjct: 46 GEALSEEGKLQDALKEYEKGLKLAP---DDLDALTAVGDIKFELGQYKEALAAYQRVVAL 102 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 P++ + + +G+ Y + R T+ ++ + +E + Sbjct: 103 DPDNSD---AHVNIGLVYNSLER--------TQKAIKAFEKALEIDPAN----------V 141 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 N L G + E+ AI FQ + D A L E Y L Sbjct: 142 FAYNGL-------GDAWYGLDEHEKAIAAFQKGIELDPDDAAAH---FNLGELYYDLGEH 191 Query: 244 DEAR 247 DEA Sbjct: 192 DEAE 195 >gi|45550177|ref|NP_609368.3| Utx, isoform A [Drosophila melanogaster] gi|21744241|gb|AAM76179.1| LD05703p [Drosophila melanogaster] gi|33589582|gb|AAQ22558.1| LD02225p [Drosophila melanogaster] gi|45445077|gb|AAF52897.3| Utx, isoform A [Drosophila melanogaster] gi|220950358|gb|ACL87722.1| CG5640-PA [synthetic construct] Length = 1136 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 32/90 (35%), Gaps = 11/90 (12%) Query: 109 KYQQAASLGEEYITQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y +A S ++Y+ + ++ + Y +G++Y ++ R K ++ ++ Sbjct: 129 EYSEALSAYQKYLRFRENNYWTNHAFIYGIGVAYFKL--------RCFKWAIKSFQELLY 180 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 N + + E I Sbjct: 181 LSPNFTCANEVHLRLGLMLKHCG--EFHIA 208 >gi|148269897|ref|YP_001244357.1| TPR repeat-containing protein [Thermotoga petrophila RKU-1] gi|61657380|emb|CAI44296.1| hypothetical protein [Thermotoga petrophila] gi|147735441|gb|ABQ46781.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga petrophila RKU-1] Length = 278 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 1/68 (1%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQ 112 V ++Y A+ E ++ +A E F R+ P L Y+ G Y++ Sbjct: 17 VSVANDLYSNALSAYLEGDYRRALELFENALREDPTIEERDSLVKLKMGICAYAIGDYEK 76 Query: 113 AASLGEEY 120 A + + Sbjct: 77 ARAYLSNF 84 >gi|332702922|ref|ZP_08423010.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfovibrio africanus str. Walvis Bay] gi|332553071|gb|EGJ50115.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfovibrio africanus str. Walvis Bay] Length = 474 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 25/85 (29%), Gaps = 3/85 (3%) Query: 50 SVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYS 106 D+ + E+ Y A+ F+ + + A + F + + Sbjct: 353 KALDIAPEDEIIRYNLALAFMDGEEYENAAAEVERALVTNGEFGQDNDTVCFNLGHIFWR 412 Query: 107 AGKYQQAASLGEEYITQYPESKNVD 131 AG A + + P+ + Sbjct: 413 AGNLPMAMFYFTQTLKLNPDHEEAA 437 >gi|325925872|ref|ZP_08187241.1| family 3 adenylate cyclase [Xanthomonas perforans 91-118] gi|325543703|gb|EGD15117.1| family 3 adenylate cyclase [Xanthomonas perforans 91-118] Length = 837 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 46/157 (29%), Gaps = 23/157 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + + D T Y E + A ++F + P +A + Sbjct: 396 SIRQNSPALPDVTTSSLDALRAYALGQQRYSEGKYGAALDFFQKAVDIDPHFALAWLGQV 455 Query: 99 MSAFVQYSAGKYQQAASL---GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 ++ Y++A E++ ++ P + Y+ S+ I D Sbjct: 456 R---AHFANVDYKKATETLRVAEQFKSRLPPRE----ALYVK--SWGVQILDPA------ 500 Query: 156 KLMLQYMSRIVERYTNSPYVK-GARFYVT-VGRNQLA 190 ++ E Y + Y A + N+ A Sbjct: 501 -QAADSWIQMAELYPD--YAPAQANAAMDLFVANRFA 534 >gi|321453432|gb|EFX64668.1| hypothetical protein DAPPUDRAFT_204585 [Daphnia pulex] Length = 1195 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + I Y+++ +YV+AI ++ + + H E + L A+ + EA+ +SL+ Sbjct: 692 LNIAHIYVEQKQYVSAIQMYENCIRKFFRHPHV-EILQYLSRAHFRAGKLREAK--LSLL 748 Query: 254 QERY 257 + ++ Sbjct: 749 KAQH 752 >gi|320104304|ref|YP_004179895.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644] gi|319751586|gb|ADV63346.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644] Length = 1497 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 11/80 (13%) Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE-EAMARLVE 235 AR V + LA + A+ RF+ VLA + +A+ L E Sbjct: 947 DARLRVQHDQGLLALH----------LHQPERAVERFRAVLAAAESSLALRAKALGHLAE 996 Query: 236 AYVALALMDEAREVVSLIQE 255 AY L L+ A E + + Sbjct: 997 AYEQLGLIPLADETLGQLIA 1016 >gi|284928935|ref|YP_003421457.1| Flp pilus assembly protein TadD [cyanobacterium UCYN-A] gi|284809394|gb|ADB95099.1| Flp pilus assembly protein TadD [cyanobacterium UCYN-A] Length = 365 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 18/139 (12%), Positives = 41/139 (29%), Gaps = 19/139 (13%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y + A + + P + KS + V Y AA Sbjct: 112 YYALGHSLANIGDNDNAATAYYYAVQLNP---KSVKSYIGLGVVLLRKEDYDGAAEAYRR 168 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +T P + N+ ++ Q+ K ++Y+ V+++ + Sbjct: 169 VMTLEPNNPNI-----------FSIMGASLLQQKEFKQAIKYLKSAVKQFP-----RDTE 212 Query: 180 FYVTVGRNQLAAKEVEIGR 198 + + L ++ G+ Sbjct: 213 LRMLLATALLQQGQIFSGK 231 >gi|302412911|ref|XP_003004288.1| glucose repression mediator protein CYC8 [Verticillium albo-atrum VaMs.102] gi|261356864|gb|EEY19292.1| glucose repression mediator protein CYC8 [Verticillium albo-atrum VaMs.102] Length = 861 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 41/140 (29%), Gaps = 29/140 (20%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSA 107 D + Y ++ +Q + KAYE + Q P + Y Sbjct: 280 AADQNDAQSWYLLGRCYMSQQKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQI 333 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y+ A I P + V+Y +G L R E Sbjct: 334 NQYRDALDAYSRAIRLNP---FISEVWYDLG--------------TLISDALDAYQRAAE 376 Query: 168 RYTNSPYVKGARFYVTVGRN 187 +P++ + + + RN Sbjct: 377 LDPANPHI---KARLQLLRN 393 >gi|291300567|ref|YP_003511845.1| hypothetical protein Snas_3081 [Stackebrandtia nassauensis DSM 44728] gi|290569787|gb|ADD42752.1| hypothetical protein Snas_3081 [Stackebrandtia nassauensis DSM 44728] Length = 107 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 6/87 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y+ LF ++F A + + P AR ++ A Y + + +A S E Sbjct: 7 YDTGKLFFDARDFITAAGWLAEVVDAEPGHEAAR---MLLARAYYHSAQLGRAESQLREI 63 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRD 147 I + P Y Y ++G + + RD Sbjct: 64 IERNPVE---AYAYLMLGRTLQRQGRD 87 >gi|198428373|ref|XP_002124751.1| PREDICTED: similar to predicted protein, partial [Ciona intestinalis] Length = 638 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 11/104 (10%), Positives = 32/104 (30%), Gaps = 21/104 (20%) Query: 65 VLFLKEQNFSKAYEYFN---QCSRDFPFA----------GVARKSLLMSAFVQYSAGKYQ 111 +K + + +A + S + + A + + ++ Sbjct: 109 KTLMKGKRYKEAITNLKNALELSTLYTYGATTSTANEAPPEAAEIHFLLGQCYTEQLQHT 168 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMS-----YAQMIRDVPY 150 +A + + P + YY G+ +++ I+D+ Sbjct: 169 EALQAYNQALKVNP---ELAEAYYQRGLCRLKLDHSKGIQDLNR 209 >gi|194451266|ref|YP_002045752.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194409570|gb|ACF69789.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] Length = 389 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A + +GR Y+ RG+Y A+ Q V+ D E E + L Y L E E Sbjct: 214 ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 271 Query: 250 VS 251 + Sbjct: 272 LR 273 >gi|162454221|ref|YP_001616588.1| hypothetical protein sce5944 [Sorangium cellulosum 'So ce 56'] gi|161164803|emb|CAN96108.1| hypothetical protein sce5944 [Sorangium cellulosum 'So ce 56'] Length = 1431 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 13/104 (12%), Positives = 28/104 (26%), Gaps = 11/104 (10%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN-----------FSKAYEYF 80 + + + R Y A ++ + +A + Sbjct: 884 AALTRSCAVSEEQKLKEGDIARPTISRGYYIDAARAFEKAEKMPDGPARVAAWREAAALY 943 Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 P A ++ + A+ G Y QA + +I +Y Sbjct: 944 KVALEKAPARDEAPEAAMNGAYCYKQVGDYDQAIEMYSLFIKEY 987 >gi|158335792|ref|YP_001516966.1| TPR domain-containing protein [Acaryochloris marina MBIC11017] gi|158306033|gb|ABW27650.1| TPR domain protein [Acaryochloris marina MBIC11017] Length = 432 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 10/83 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAASLG 117 ++++ L+++ ++ A F Q PF+ ++ L Y +G A Sbjct: 5 LFQQGQAQLRQKQYADAIATFTQVLDADPFSIGAYCQRGL-----AYYDSGNVYAAIEDY 59 Query: 118 EEYITQYPESKNVDYVYYLVGMS 140 + + YY ++ Sbjct: 60 GKALEI---DSKSAKAYYCRALA 79 >gi|145504518|ref|XP_001438229.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124405394|emb|CAK70832.1| unnamed protein product [Paramecium tetraurelia] Length = 566 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 56/166 (33%), Gaps = 18/166 (10%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 K K N++ A +++ + P ++ F S KY +A ++ I Sbjct: 387 NKGYALFKLNNYNDAIACYDKAIQLEPN---MIRAYNNKGFALMSLNKYSEAIVWIDKAI 443 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YD---QRATKLMLQYMSRIVERYTNSPY 174 P S Y++ G + + + YD Q Y ++ Y+ + Y Sbjct: 444 QLNPNSATT---YFIKGNALHSLNKSEDAIFCYDKGIQLNPNDATAYFNKGNVLYSLNKY 500 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 + A G + + Y +GE + I + + NY Sbjct: 501 -EDAIACYDKGIELDPSHAIA----YFNKGEILTFIKNYSSAIENY 541 >gi|86606382|ref|YP_475145.1| TPR repeat-containing protein [Synechococcus sp. JA-3-3Ab] gi|86554924|gb|ABC99882.1| tetratricopeptide repeat protein [Synechococcus sp. JA-3-3Ab] Length = 110 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 12/105 (11%), Positives = 36/105 (34%), Gaps = 14/105 (13%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 + + A ++ + P A + + ++V + ++A + E I Sbjct: 1 MLRGDPVAALADLDRAVQLDP--SYAP-AYVNRSYVYNQLRQPEEALADAERAIQL---D 54 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + Y+ G++Y Q+ + + + + ++ S Sbjct: 55 PRIPEAYFSRGVAYLQL--------GDREAAMADFRQALALFSKS 91 >gi|62180273|ref|YP_216690.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127906|gb|AAX65609.1| putative N-acetylglucosaminyl transferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322714747|gb|EFZ06318.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 389 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A + +GR Y+ RG+Y A+ Q V+ D E E + L Y L E E Sbjct: 214 ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 271 Query: 250 VS 251 + Sbjct: 272 LR 273 >gi|61657512|emb|CAI44423.1| hypothetical protein [Thermotoga sp. RQ2] Length = 278 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 1/68 (1%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQ 112 V ++Y A+ E ++ +A E F R+ P L Y+ G Y++ Sbjct: 17 VSVANDLYSNALSAYLEGDYRRALELFENALREDPTIEERDSLVKLKMGICAYAIGDYEK 76 Query: 113 AASLGEEY 120 A + + Sbjct: 77 ARAYLSNF 84 >gi|168462824|ref|ZP_02696755.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195634056|gb|EDX52408.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 389 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A + +GR Y+ RG+Y A+ Q V+ D E E + L Y L E E Sbjct: 214 ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 271 Query: 250 VS 251 + Sbjct: 272 LR 273 >gi|168241280|ref|ZP_02666212.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205339167|gb|EDZ25931.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 389 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A + +GR Y+ RG+Y A+ Q V+ D E E + L Y L E E Sbjct: 214 ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 271 Query: 250 VS 251 + Sbjct: 272 LR 273 >gi|308535326|ref|YP_002139732.2| TPR domain-containing protein [Geobacter bemidjiensis Bem] gi|308052671|gb|ACH39936.2| TPR domain protein [Geobacter bemidjiensis Bem] Length = 596 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 42/154 (27%), Gaps = 31/154 (20%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 V L + N A + F + P +A KY QA + + IT Sbjct: 448 GVALLNQGNTDIAIQEFQKAISIKPNYVLAHN---DLGAAYAKQSKYDQAITEFQTAITI 504 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 P + + + + D Q ++ + S Sbjct: 505 NP-----------RAVVFHKNLGDTFAQQGNLYAAIREYQIALTLNPGS----------- 542 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 A +G + + G AA+ +Q L Sbjct: 543 ------AEIHFYLGNAFARLGNIDAAVKEYQTAL 570 >gi|152969830|ref|YP_001334939.1| tetratricopeptide repeat protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238894338|ref|YP_002919072.1| tetratricopeptide repeat protein [Klebsiella pneumoniae NTUH-K2044] gi|262042993|ref|ZP_06016137.1| tetratricopeptide repeat protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|150954679|gb|ABR76709.1| putative heat shock protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546654|dbj|BAH63005.1| putative heat shock protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259039710|gb|EEW40837.1| tetratricopeptide repeat protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 389 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 27/189 (14%), Positives = 58/189 (30%), Gaps = 42/189 (22%) Query: 64 AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + +A + F Q DF + + + A +Q A + E + Sbjct: 114 GRDYMAAGLYDRAEDMFKQLVDETDFRLGALQQLLQIYQA-----TSDWQSAIEVAERLV 168 Query: 122 TQ----YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + G I + + ++ + + Sbjct: 169 KLGKEKH------------RG-----EIANFWCELALQQMAANDLDK-----------AM 200 Query: 178 ARFYVTVGRNQ-LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 A ++ A + +GR ++++G+Y A+ + V+ D E E + L Sbjct: 201 ALLRKGAAADRNSARVSIMMGRVWMEKGDYAKAVESLERVID--QDKELVGETLEMLQTC 258 Query: 237 YVALALMDE 245 Y L DE Sbjct: 259 YQQLGKTDE 267 >gi|134046502|ref|YP_001097987.1| hypothetical protein MmarC5_1476 [Methanococcus maripaludis C5] gi|132664127|gb|ABO35773.1| Tetratricopeptide TPR_2 repeat protein [Methanococcus maripaludis C5] Length = 226 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 21/106 (19%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFP--------------FAGVARK 95 D + E+YE+ + ++ KA E +++ +P + A + Sbjct: 25 DSKTTDELYEEGKEYYNNGSYLKAVECYDKVLEMDPKYPRIMLTKNLALSKINRSERAIE 84 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + Y+ G+Y+ A + EE + N Y G+ + Sbjct: 85 YYDNGTY-FYNRGQYENAIACYEEALK---ADPNYTYAVVFKGVVF 126 >gi|17551312|ref|NP_509450.1| human UTX (Ubiquitously transcribed TPR on X) homolog family member (utx-1) [Caenorhabditis elegans] gi|746479|gb|AAB36864.1| Human utx (ubiquitously transcribed tpr on x) homolog protein 1, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 1168 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 9/55 (16%), Positives = 22/55 (40%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +++L + + A E F + FP +A ++ + Y + +L + Sbjct: 136 GLVYLHFKQWKPAIEAFTRLLYSFPTGMIALQAKVRLGVCYMELEDYNRCINLFK 190 >gi|169778217|ref|XP_001823574.1| import receptor subunit tom-70 [Aspergillus oryzae RIB40] gi|83772311|dbj|BAE62441.1| unnamed protein product [Aspergillus oryzae] Length = 632 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 47/141 (33%), Gaps = 20/141 (14%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92 +G + ++ D L + Y +A L F++A + + + R F ++ Sbjct: 392 LGNKDAAADDFELAISHNKDDADIYYHRAQLHFILGEFAEAAKDYQKSIDLDRTFIYSH- 450 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + QY G A + + + ++V VY ++ DQ Sbjct: 451 -----IQLGVTQYKMGSVASAMATFRRSVKNF---EDVPDVY--------NYYGELLLDQ 494 Query: 153 RATKLMLQYMSRIVERYTNSP 173 + ++ + VE S Sbjct: 495 QNFSEAIEKFDKAVEMEKQSK 515 >gi|67920542|ref|ZP_00514062.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] gi|67858026|gb|EAM53265.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] Length = 520 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 32/101 (31%), Gaps = 24/101 (23%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDF--PFAG----VARKSLLMSAFV 103 D Y + V+ +S+A E Q + +++ L A Sbjct: 395 DSSYLSARFNLGVILGNLGQYSQAIEQLEQVIQAEARHAEAYNSLGFIYSKQRQLDRAIT 454 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 Y QA ++ ++ +Y +GM+ Q+ Sbjct: 455 YYR-----QAINVAPKF----------AQAHYNLGMTLLQL 480 >gi|320103811|ref|YP_004179402.1| heat shock protein DnaJ domain-containing protein [Isosphaera pallida ATCC 43644] gi|319751093|gb|ADV62853.1| heat shock protein DnaJ domain protein [Isosphaera pallida ATCC 43644] Length = 1008 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 6/33 (18%), Positives = 12/33 (36%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 ++ +A Y Y A + +E + P Sbjct: 360 QARFDAADAAYKQRDYAVALAHLDELLRLDPYH 392 >gi|320544884|ref|NP_001188773.1| Utx, isoform D [Drosophila melanogaster] gi|318068407|gb|ADV37023.1| Utx, isoform D [Drosophila melanogaster] Length = 1130 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 32/90 (35%), Gaps = 11/90 (12%) Query: 109 KYQQAASLGEEYITQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y +A S ++Y+ + ++ + Y +G++Y ++ R K ++ ++ Sbjct: 129 EYSEALSAYQKYLRFRENNYWTNHAFIYGIGVAYFKL--------RCFKWAIKSFQELLY 180 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197 N + + E I Sbjct: 181 LSPNFTCANEVHLRLGLMLKHCG--EFHIA 208 >gi|313228089|emb|CBY23239.1| unnamed protein product [Oikopleura dioica] Length = 997 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 59/171 (34%), Gaps = 22/171 (12%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 + + A +++++ P + A ++ L A G A ++ + + +S Sbjct: 607 ERDDADNAVKFYSRAKTISPGSANANQATLKLADAYRLKGDLTSAQAILSKLM----DSD 662 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 +I DV D + +Q+ R+ E G + ++ Sbjct: 663 VASQAQ--------SLIADVICDTGNIQGAIQHFKRLFEG---GRDQWGILGRMMPLLHR 711 Query: 189 LAAKEVEIGRYYLKR---GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 +++++ Y+K AA +L Y E AM L++A Sbjct: 712 --NRQLDVAHQYVKNIKDNSSPAAKAYCLGMLDAYQL--RTESAMIHLLQA 758 >gi|302186719|ref|ZP_07263392.1| TPR repeat-containing protein [Pseudomonas syringae pv. syringae 642] Length = 338 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 10/99 (10%), Positives = 35/99 (35%), Gaps = 14/99 (14%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 ++ E F + + P + ++ L A + G + A + + P + Sbjct: 145 QQSAEAFQESLKSQPQSA---QNQLQLARLYLQTGDLEPALAALQRATALDPGNIEA--- 198 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 +++ +++ + + ++++E +S Sbjct: 199 ----ALAHIELLDR----KGQAEQARSLFAQLLEHNPDS 229 >gi|296282863|ref|ZP_06860861.1| hypothetical protein CbatJ_04551 [Citromicrobium bathyomarinum JL354] Length = 323 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 20/105 (19%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 Q ++ VE+Y + + T GRN L GR +L G+ A Sbjct: 215 EAQQALAAFVEKYPDH-------WRTTYGRNLL-------GRAFLDNGQ---AREAAPWF 257 Query: 217 LANYS---DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 L NY DA A +++ L E+ + L + A ++ E YP Sbjct: 258 LKNYQADNDAARAPDSLLYLAESMIELGDTNRACIALAEFSETYP 302 >gi|291279229|ref|YP_003496064.1| hypothetical protein DEFDS_0832 [Deferribacter desulfuricans SSM1] gi|290753931|dbj|BAI80308.1| hypothetical protein [Deferribacter desulfuricans SSM1] Length = 205 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 45/122 (36%), Gaps = 19/122 (15%) Query: 70 EQNFSKAYEYFNQC-----SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 ++ +++ + + FP K ++++ YQ A + ++Y++ Sbjct: 89 DKKYNELKKAYQNLSALGMDSQFP------KIYEELGVLEFNKKNYQVALNYFKKYLSTA 142 Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 + + VYY SY Q+ + + Y ++++ Y S Y A V Sbjct: 143 KNKEEIPKVYYYTAKSYLQLDDKMN--------AVYYFDKLIKEYPKSFYKNLAEKEVKE 194 Query: 185 GR 186 R Sbjct: 195 LR 196 >gi|295701041|ref|YP_003608934.1| hypothetical protein BC1002_5497 [Burkholderia sp. CCGE1002] gi|295440254|gb|ADG19423.1| TPR repeat-containing protein [Burkholderia sp. CCGE1002] Length = 280 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 19/61 (31%), Gaps = 7/61 (11%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + +A F++ FP +LL A +Y A E I P + Sbjct: 196 KYDEALSVFDRALEHFP-----EDALLHFNRAVALEELERYDAAVQAYERCIELNPTHAD 250 Query: 130 V 130 Sbjct: 251 A 251 >gi|218248390|ref|YP_002373761.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 8801] gi|257060287|ref|YP_003138175.1| hypothetical protein Cyan8802_2471 [Cyanothece sp. PCC 8802] gi|218168868|gb|ACK67605.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801] gi|256590453|gb|ACV01340.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802] Length = 406 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 17/143 (11%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 Y + + ++ A +NQ P A + +Y+ G Q A + Sbjct: 185 AEAYYNRGLAKSNLGDYQGAISDYNQAIEIKP--DYAA-AYNNRGLTKYNLGDNQGAITD 241 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + I P+ + YY G++ + + + ++ ++ + Y Sbjct: 242 YTQAIEIKPDDAD---AYYNRGLAKYNL--------GDKQGAIADYNQAIKIKPD--YAT 288 Query: 177 GARFYVTVGRNQLAAKEVEIGRY 199 N L K+ I Y Sbjct: 289 AYNNRGNAKYN-LGDKQGAIADY 310 >gi|167526271|ref|XP_001747469.1| hypothetical protein [Monosiga brevicollis MX1] gi|163773915|gb|EDQ87549.1| predicted protein [Monosiga brevicollis MX1] Length = 682 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 39/120 (32%), Gaps = 23/120 (19%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ-------CSR--DFPFA-----------GVARKSLLMS 100 +E+ F K + +++A + + P + + +LL Sbjct: 530 FEEGNTFFKSKRYAEAIIAYEKCMAHIETIENSARVPESAIPDEMLKSLQPLREAALLNM 589 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 A + KY+ A I + + YY ++ RD+ Q +L L+ Sbjct: 590 AACKLQVKKYKDAIDHTTMVIERGTSNPK---AYYRRAQAHLLRGRDLELAQADIELALE 646 >gi|154341943|ref|XP_001566923.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134064248|emb|CAM40447.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 849 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 66/238 (27%), Gaps = 52/238 (21%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + + Y++ + + A + + P K+L AF + Y Sbjct: 406 PPLLDEHYFYQRGLQHRQSGELEAAVAMYTKALEISPTHF---KALFNRAFCEDKLKNYA 462 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSY--------------------------AQMI 145 +A + P + YY +G+SY Sbjct: 463 RAIDDYTAALELDPRNPFT---YYNLGISYDHTGSHARAVQAFTRAIELDDHHPDFFHNR 519 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY------ 199 + Q A + + + N + + +L + + Y Sbjct: 520 GFMQRKQGAYTAAIADYTAAIFLDPNH---FKSHYNRAYCFAKLGYYDEAVADYTAALKI 576 Query: 200 -------YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA----YVALALMDEA 246 Y RG +A + + + + +++ A + +A + A Y L D A Sbjct: 577 DSDNSNVYHNRGAALAKLGKLRAAVEDFNRALKRDPKLAFSLNARGLVYDQLQQYDRA 634 >gi|119946441|ref|YP_944121.1| TPR repeat-containing protein [Psychromonas ingrahamii 37] gi|119865045|gb|ABM04522.1| protein containing tetratricopeptide (TPR) repeat [Psychromonas ingrahamii 37] Length = 657 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 17/123 (13%), Positives = 42/123 (34%), Gaps = 13/123 (10%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR--EVY----EKAVLFLKEQN 72 Y L + +A + ++++ + + Y + E+Y EK K + Sbjct: 332 FYTLLLALTLPVATPEVQASIWKNNQQNAFQAYQNQDYAQARELYDSPLEKGSALYKNKQ 391 Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE----SK 128 + +A F Q + + P + + +A + ++ + P + Sbjct: 392 YQQALTKFTQATINRPESA---AAFYNQGNAYAQLHNADKAIAAYQQSLKLNPTLKEAQE 448 Query: 129 NVD 131 N+D Sbjct: 449 NID 451 >gi|45358448|ref|NP_988005.1| ATP/GTP-binding motif-containing protein [Methanococcus maripaludis S2] gi|44921206|emb|CAF30441.1| TPR repeat:ATP/GTP-binding site motif A (P-loop) [Methanococcus maripaludis S2] Length = 388 Score = 37.4 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 70/206 (33%), Gaps = 38/206 (18%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S+ + +++ E + + K+ EYFN+ P + + GK Sbjct: 5 SIFKSKDPKKLLETGTEYYNSGKYQKSIEYFNKTLNSEPKNP---DAWYFKGNAYHMLGK 61 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A E+ ++ P + + SY ++ L+ VE Sbjct: 62 SKLAQDSYEKALSIRPNDLEI-----IK--SYTMLLN-----------SLELFKESVEIL 103 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 V + + +G YLK G++ AI ++ +L +E Sbjct: 104 ---KNVSESDDKIIEI----------LGDAYLKTGKFNEAILQYNNILERKPR---YKEI 147 Query: 230 MARLVEAYVALALMDEARE-VVSLIQ 254 +A+ A V L DEA E +++ Sbjct: 148 LAKKGTALVGLKKFDEALEIYEKVLK 173 >gi|313672201|ref|YP_004050312.1| tetratricopeptide tpr_1 repeat-containing protein [Calditerrivibrio nitroreducens DSM 19672] gi|312938957|gb|ADR18149.1| Tetratricopeptide TPR_1 repeat-containing protein [Calditerrivibrio nitroreducens DSM 19672] Length = 529 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 60/190 (31%), Gaps = 41/190 (21%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109 D Y V+ +++F A +Y+ + F A+ Sbjct: 294 DKNDPLSYYYLGVISEIKKDFQGAVKYYKELTLMDPRHTFGKK------RLAYAYIKIKD 347 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y +A + E + ++VDY + + + YA+ + T+ L + + + Sbjct: 348 YSKALTALESIDK---DERDVDY-FRIKALIYAEK--------KDTQNQLATLLDGLSKN 395 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 NS + L +I YY K +Y + +L+ + A Sbjct: 396 PNSE-------------DLL----FDIADYYEKVKQYDKVEYYLKKLLSINPNNAS---A 435 Query: 230 MARLVEAYVA 239 + L Y Sbjct: 436 LNYLGYLYAE 445 >gi|258591099|emb|CBE67394.1| protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 251 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 20/161 (12%), Positives = 48/161 (29%), Gaps = 35/161 (21%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKA 76 +L ++ + + V + G SR T + + E+ + + + +A Sbjct: 6 KLPSWSQILLAGVLVALVGGAFWLKSRPTMPIGATAGLESVSSILEQGIQAHNARQYEQA 65 Query: 77 YEYFNQCSRDFPFAG---------VARKSL----------------------LMSAFVQY 105 E++++ P + + Y Sbjct: 66 VEWYHRVLAQDPGHPVAHYNLGQIYTVQGQPAKAQWEYEAVLRADPRHLDAWINLGVALY 125 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 K+Q+AA + +T P + +G++ +M R Sbjct: 126 RQRKFQEAAEASRQALTLSPRHP---MALFNLGVTLLEMDR 163 >gi|224002849|ref|XP_002291096.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220972872|gb|EED91203.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 620 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 69/214 (32%), Gaps = 24/214 (11%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV---YEKAVLFLKEQNFSK 75 + + +A + SS S T Y+ ++ ++ L + Sbjct: 1 MTILTRRLPSILASIAFILSTTTSSTSSVTASTTYSEYEEKINHHLQEGNNALATGDLPL 60 Query: 76 AYEYFNQCSRDFPFAGV------ARKSLLM--SAFVQ-YSAGKYQQAASLGEEYITQYPE 126 A E++ C + P + L SA + ++A SL + +T +P+ Sbjct: 61 AAEHYESCLKLDPNQRYCLINYASTLVDLNESSADANETKEQRLEKAISLLRQVMTLHPK 120 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY-TNSPYVKGARFYVTVG 185 + + + A +++D + TK VE A + Sbjct: 121 DGDAAF-------NLALLLQDSSRSEDFTKQAANLYQIAVEASIAEGEERWDAWANMAAA 173 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 + +L G + +RG Y +I + ++ Sbjct: 174 KQELGQ---FTGPFGARRG-YERSIVFLEQMVEE 203 >gi|192360793|ref|YP_001981533.1| putative 34 kDa outer membrane protein [Cellvibrio japonicus Ueda107] gi|190686958|gb|ACE84636.1| putative 34 kDa outer membrane protein [Cellvibrio japonicus Ueda107] Length = 251 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 24/58 (41%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y + + +Q++ +A +F+ FP + + L V + G QA +L Sbjct: 172 YYWLGKISMLKQDYPQAKTWFSDLISRFPDSSKVAGAQLDLGRVFFFMGDTAQAKALL 229 >gi|42527620|ref|NP_972718.1| hypothetical protein TDE2117 [Treponema denticola ATCC 35405] gi|41818448|gb|AAS12637.1| conserved hypothetical protein [Treponema denticola ATCC 35405] Length = 429 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 6/39 (15%), Positives = 18/39 (46%), Gaps = 3/39 (7%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDF 87 + +++Y +A+ +N+ KA E + + + + Sbjct: 364 EKLSTVKKLYVQALKEYNNKNYEKAIELWKEILTIDKRY 402 >gi|255732832|ref|XP_002551339.1| predicted protein [Candida tropicalis MYA-3404] gi|240131080|gb|EER30641.1| predicted protein [Candida tropicalis MYA-3404] Length = 325 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 57/176 (32%), Gaps = 42/176 (23%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + +A ++ R P ++L+ A S ++ +AA L E+ + +PE+ Sbjct: 146 GDIERALSSYDAALRHAPNNP---EALIKLANTYRSKDQFLKAAELYEQALNFHPENGET 202 Query: 131 ----------------DYVYYLVGMSYAQMIR--------DVPYDQ-RATKLMLQYMSRI 165 Y Y + Y + + YD+ + + + R+ Sbjct: 203 WGLLGHCYLMLDDLQRAYAAYQRALFYLENPNIPKLWHGIGILYDRYGSLEYAEEAFVRV 262 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 ++ N F + + Y +G+ A+ FQ +L N Sbjct: 263 LDLDPNFDKANEIYFRLGII--------------YKHQGKLQPALECFQYILNNPP 304 >gi|240143897|ref|ZP_04742498.1| putative tetratricopeptide repeat-containing domain protein [Roseburia intestinalis L1-82] gi|257204089|gb|EEV02374.1| putative tetratricopeptide repeat-containing domain protein [Roseburia intestinalis L1-82] Length = 392 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 73/252 (28%), Gaps = 59/252 (23%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 + + +A L + L+ D R + + ++ ++ A FN Sbjct: 6 LPYMVAGAVLFAALFTGCTNERLEDELDFR------KIGINSMQSGDYEGAVAAFNSALS 59 Query: 86 DFPFAGVARKSLLMSAF----VQYSAGKYQQAASLGEEYITQYPESKNVDY------VYY 135 + L + QY+ G + A + + I DY YY Sbjct: 60 QCVGKI--TDTELDICYYKAAAQYAGGDIEGALATYQAMI---------DYDEENGNAYY 108 Query: 136 LVG-MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN------SPYVKGARFYVTVGRNQ 188 L G +S Q D + + V+ + Y A +T + Sbjct: 109 LHGCLSLKQQDTDT---------AKKDFANAVKYNPDDYELYVGIYENLAGNNMTEEGEE 159 Query: 189 LAAKEVEI-----------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 K +I GR Y G+Y A+ + + + +A L + Y Sbjct: 160 YLNKAFDIKGNSAENLTWRGRIYYLLGQYDNAVKELEGAVKK-----DSAKANLYLAQVY 214 Query: 238 VALALMDEAREV 249 A A + Sbjct: 215 EAEEDSANAEKY 226 >gi|166368546|ref|YP_001660819.1| tetratricopeptide TPR_2 [Microcystis aeruginosa NIES-843] gi|166090919|dbj|BAG05627.1| tetratricopeptide TPR_2 [Microcystis aeruginosa NIES-843] Length = 741 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 55/177 (31%), Gaps = 32/177 (18%) Query: 61 YEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y + V F +A ++ ++ Y+ G+ ++A + + Sbjct: 516 YNRGVALGNLGRFEEAIASYDRALEIK----PDKHEAWYNRGVALYNLGRLEEAIASYDR 571 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P+ + + G++ + R + + R +E + P A Sbjct: 572 ALEFKPDDPD---AWNNRGVALGNLGR--------FEQAIASYDRALEFKPDDP---DAW 617 Query: 180 FYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYSDA 223 + + L E I Y + RG + + R + +A+Y A Sbjct: 618 YNRGNALDDLGRLEEAIASYDRALEFKPDYHQAWYNRGNALDDLGRLEEAIASYDQA 674 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 46/141 (32%), Gaps = 21/141 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + V F +A +++ P A Y+ G+++QA + + Sbjct: 74 YNRGVALGNLGRFEQAIASYDRALEIKPDDPDAWN---NRGNALYNLGRFEQAIASYDRA 130 Query: 121 ITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + P DY +Y G++ + R + + R +E + P A Sbjct: 131 LEIKP-----DYHEAWYNRGVALGNLGR--------FEQAIASYDRALEFKPDDP---DA 174 Query: 179 RFYVTVGRNQLAAKEVEIGRY 199 + V L E I Y Sbjct: 175 WYNRGVALGNLGRFEQAIASY 195 Score = 35.5 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 61/204 (29%), Gaps = 36/204 (17%) Query: 61 YEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y + V F +A ++ ++ + G+ ++A + + Sbjct: 448 YNRGVALGNLGRFEEAIASYDRALEIK----PDKHEAWYNRGVALGNLGRLEEAIASYDR 503 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P+ + +Y G++ + R + + R +E + Sbjct: 504 ALEFKPDDPD---AWYNRGVALGNLGR--------FEEAIASYDRALEIKPDKHEAW--Y 550 Query: 180 FYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANYSDA--- 223 N L E I Y + RG + + RF+ +A+Y A Sbjct: 551 NRGVALYN-LGRLEEAIASYDRALEFKPDDPDAWNNRGVALGNLGRFEQAIASYDRALEF 609 Query: 224 -EHAEEAMARLVEAYVALALMDEA 246 +A A L ++EA Sbjct: 610 KPDDPDAWYNRGNALDDLGRLEEA 633 >gi|162449100|ref|YP_001611467.1| hypothetical protein sce0830 [Sorangium cellulosum 'So ce 56'] gi|161159682|emb|CAN90987.1| hypothetical protein predicted by Glimmer/Critica [Sorangium cellulosum 'So ce 56'] Length = 390 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 1/82 (1%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V + +D E +E+A L +A F + +R P VA SL + Sbjct: 48 VVVSPYSDAELAAE-FERARALLLADRAREAAPLFERLARLAPGGEVAPPSLFNAGLAHE 106 Query: 106 SAGKYQQAASLGEEYITQYPES 127 + G AA E ++P+ Sbjct: 107 ALGDRALAAERYREVAQRFPDH 128 >gi|114799586|ref|YP_760538.1| putative lipoprotein [Hyphomonas neptunium ATCC 15444] gi|114739760|gb|ABI77885.1| putative lipoprotein [Hyphomonas neptunium ATCC 15444] Length = 213 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 39/116 (33%), Gaps = 28/116 (24%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFS--KAYEYFNQCSRDFPFAGVARKSLLMSA----- 101 + +YE VL + ++ A YF++ +P AR++ Sbjct: 68 PELAPEEKAHVLYEMGVLSMSPTGYNLPGAVGYFDEVIATYPGTEWARRAEAKLPEARAQ 127 Query: 102 -------------------FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + + G+++ A L +Y + P++ +V Y +G Sbjct: 128 VGALNIVLESPDSTNTERFYALMNLGRHEDAIDLMTQY-SIEPDN-DVKLAMYQIG 181 >gi|16760172|ref|NP_455789.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765052|ref|NP_460667.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142057|ref|NP_805399.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56413366|ref|YP_150441.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161613809|ref|YP_001587774.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167549790|ref|ZP_02343548.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168230140|ref|ZP_02655198.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194446469|ref|YP_002040959.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194469605|ref|ZP_03075589.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194737248|ref|YP_002114737.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197247715|ref|YP_002146321.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265165|ref|ZP_03165239.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198242977|ref|YP_002215435.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390499|ref|ZP_03217110.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204927717|ref|ZP_03218918.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213052586|ref|ZP_03345464.1| hypothetical protein Salmoneentericaenterica_06516 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213416473|ref|ZP_03349617.1| hypothetical protein Salmonentericaenterica_00137 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213424422|ref|ZP_03357235.1| hypothetical protein SentesTyphi_01405 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213582489|ref|ZP_03364315.1| hypothetical protein SentesTyph_15343 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213647983|ref|ZP_03378036.1| hypothetical protein SentesTy_12279 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855514|ref|ZP_03383754.1| hypothetical protein SentesT_16285 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224583802|ref|YP_002637600.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238911902|ref|ZP_04655739.1| hypothetical protein SentesTe_12321 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825191|ref|ZP_06544499.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25324989|pir||AD0655 conserved hypothetical protein STY1343 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16420238|gb|AAL20626.1| putative N-acetylglucosaminyl transferase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502466|emb|CAD08423.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29137686|gb|AAO69248.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127623|gb|AAV77129.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161363173|gb|ABX66941.1| hypothetical protein SPAB_01543 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194405132|gb|ACF65354.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194455969|gb|EDX44808.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712750|gb|ACF91971.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197211418|gb|ACH48815.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243420|gb|EDY26040.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197937493|gb|ACH74826.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602944|gb|EDZ01490.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204323059|gb|EDZ08255.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205324977|gb|EDZ12816.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205335504|gb|EDZ22268.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|224468329|gb|ACN46159.1| hypothetical protein SPC_2023 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|267993649|gb|ACY88534.1| hypothetical protein STM14_2066 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|312912699|dbj|BAJ36673.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085795|emb|CBY95571.1| Uncharacterized protein HI1223 Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224336|gb|EFX49399.1| Heat shock predicted periplasmic protein YciM, precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322614966|gb|EFY11891.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621440|gb|EFY18294.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623218|gb|EFY20060.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628508|gb|EFY25296.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633672|gb|EFY30412.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638520|gb|EFY35215.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640810|gb|EFY37459.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645326|gb|EFY41854.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651791|gb|EFY48163.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654312|gb|EFY50634.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659278|gb|EFY55526.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662721|gb|EFY58928.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667668|gb|EFY63828.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671918|gb|EFY68039.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677036|gb|EFY73100.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680302|gb|EFY76341.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685269|gb|EFY81265.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323129978|gb|ADX17408.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323196181|gb|EFZ81340.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199328|gb|EFZ84422.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204786|gb|EFZ89782.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205918|gb|EFZ90881.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212719|gb|EFZ97534.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217245|gb|EGA01966.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222890|gb|EGA07243.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225572|gb|EGA09800.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232107|gb|EGA16214.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234634|gb|EGA18721.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238086|gb|EGA22145.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243311|gb|EGA27330.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248433|gb|EGA32368.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252539|gb|EGA36382.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255436|gb|EGA39202.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260838|gb|EGA44440.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267575|gb|EGA51058.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270995|gb|EGA54426.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326623182|gb|EGE29527.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332988596|gb|AEF07579.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 389 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A + +GR Y+ RG+Y A+ Q V+ D E E + L Y L E E Sbjct: 214 ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 271 Query: 250 VS 251 + Sbjct: 272 LR 273 >gi|325499002|gb|EGC96861.1| hypothetical protein ECD227_3099 [Escherichia fergusonii ECD227] Length = 248 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/155 (11%), Positives = 47/155 (30%), Gaps = 23/155 (14%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS--LLMSAFVQYS 106 + + + Y A + + +A ++ Q A ++ +L A Q++ Sbjct: 78 EELAIAETNQNHYALANELARLGRYHEAVPHYQQALS----GIFAHEAVMMLSLAQAQFA 133 Query: 107 AGKYQQAASLGEEYITQYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 ++ E+ + P+ ++ D ++ + ++ Q + Sbjct: 134 IQEFTACQQTLEDVMRYNPDFQSADGHLLFARALA----------AQEKYADAESEFEVL 183 Query: 166 VERYTNSP---YVKGARFYVTVGRNQLAAKEVEIG 197 V Y Y ++ R A E + Sbjct: 184 VSYYPGPQARIYYAEMLAKMSRLRE---ANEQYVA 215 >gi|291567441|dbj|BAI89713.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 715 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 46/131 (35%), Gaps = 28/131 (21%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 +D E E A + F++A + + +P A + Y+ Sbjct: 138 IDIEPQNIKLTEYIEVAQTLDNQGKFTQAIALYTKAMEIYP----------NVAEIHYNL 187 Query: 108 GK-------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 G+ ++ A + ++ + P ++ YVY +G DV +Q+ + + Sbjct: 188 GETFVNCQQWKSAITAYKQALEMNP---DLYYVYSRLG--------DVFTEQQNYQEAIA 236 Query: 161 YMSRIVERYTN 171 + V+ + Sbjct: 237 AYQQCVKLKPD 247 >gi|254505221|ref|ZP_05117372.1| peptidase, M48 family [Labrenzia alexandrii DFL-11] gi|222441292|gb|EEE47971.1| peptidase, M48 family [Labrenzia alexandrii DFL-11] Length = 494 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 65/193 (33%), Gaps = 28/193 (14%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 A L + S + D + Y +A+ ++ + A ++ R P Sbjct: 292 AKAKLFAFTSHPSATLRAYPRKDKSLPAQ-YARAIAAMQSRG-KGAVGEIDKLIRQHPTN 349 Query: 91 GV----ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 ++LL G + A + ++ P ++V + YA + Sbjct: 350 PYFHELKGQALLE-------GGDPKNAIAPFRRALSIRPNET-----QFMVWLGYALVAS 397 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNS--PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 D + + R ++R +NS Y + A + G A ++ + + RG Sbjct: 398 D---NPANLAEAESVLKRAIQRDSNSGTAYAQLAIAHGRQGER--AEADLATAKGLMVRG 452 Query: 205 EYVAA---IPRFQ 214 E+ AA R Q Sbjct: 453 EFEAAKRYAARAQ 465 >gi|153954567|ref|YP_001395332.1| hypothetical protein CKL_1949 [Clostridium kluyveri DSM 555] gi|146347425|gb|EDK33961.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555] Length = 278 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 59/140 (42%), Gaps = 22/140 (15%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKS 96 +++ +DV DS+ D+ + +Y + K+++ ++ N + S + + A Sbjct: 141 KENGKDVLTDSMNDLAW---MYIEGKG--KDKDLNQGATILNEAIKISPSYNESYYA--- 192 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 A+V +Y ++ S +YI ++ Y ++G+ Y + + Sbjct: 193 ---LAYVYSHLERYDESISAANKYIENTKSNEEKSNAYNILGLDYEGN--------KDYE 241 Query: 157 LMLQYMSRIVERYTNSPYVK 176 +Y ++ ++ +N+ Y K Sbjct: 242 NAKKYFNQAIQLDSNNQYAK 261 >gi|2896142|gb|AAC03120.1| Tpr1 [Schizosaccharomyces pombe] Length = 1039 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 57/188 (30%), Gaps = 27/188 (14%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 KA + + N+ A+ + + P + ++ A S Sbjct: 181 KARILYAKGNYRSAFRLYQRALVSNP--QFKPDPRIGIGLCFWNLDMKTDALSAWTRVQQ 238 Query: 123 QYPESKNVD-YVYYLVGMSYAQM-IRDVPYDQ--RATKLMLQYMSRIVERYTNSPYVKGA 178 P++ VD Y +G+ Y + ++V D + LQ++ R + N P Sbjct: 239 LDPKNTVVDTY----IGLYYYDLAFQNVNNDSFVQNYGKALQHIQRAFKTRNNDPVASSI 294 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 Y + Y I + V+ N + + + AY Sbjct: 295 LER-----------------YVYSKKNYEGCIKLAENVIQNSFSSSLIADGYYWMGRAYH 337 Query: 239 ALALMDEA 246 + ++A Sbjct: 338 QMGNNEKA 345 >gi|88803288|ref|ZP_01118814.1| hypothetical protein PI23P_11887 [Polaribacter irgensii 23-P] gi|88780854|gb|EAR12033.1| hypothetical protein PI23P_11887 [Polaribacter irgensii 23-P] Length = 255 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 19/45 (42%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 D +Y+ + ++ + F KA F + ++P + A+ Sbjct: 200 DFTAPLFLYKAGMTAMQLEEFDKAATLFTKIKENYPTSTEAKDVE 244 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 10/125 (8%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y V +L+ + + KA EY + + +L + +QA E+ Sbjct: 136 YYAGVSYLEMKQYDKAIEYLENFDSEDEM--LGPVALGAVGDAFADINQAEQALEYYEKA 193 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + Y GM+ Q+ ++I E Y S K Sbjct: 194 AKKKNNDFTAPLFLYKAGMTAMQL--------EEFDKAATLFTKIKENYPTSTEAKDVEK 245 Query: 181 YVTVG 185 ++ Sbjct: 246 FINAA 250 >gi|157384228|gb|ABV49465.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 40 [Homo sapiens] Length = 1337 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|157384186|gb|ABV49444.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 243 [Homo sapiens] Length = 1266 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|157384170|gb|ABV49436.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 62 [Homo sapiens] Length = 1367 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTXYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|157384152|gb|ABV49427.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 28 [Homo sapiens] Length = 1125 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|157384136|gb|ABV49419.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 45 [Homo sapiens] Length = 1215 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|157384132|gb|ABV49417.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 32 [Homo sapiens] Length = 1024 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|151946811|gb|ABS19052.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 189 [Homo sapiens] Length = 1137 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|151946813|gb|ABS19053.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 213 [Homo sapiens] Length = 1182 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|151946755|gb|ABS19024.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 188 [Homo sapiens] Length = 1137 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|151946739|gb|ABS19016.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 269 [Homo sapiens] Length = 1140 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSXAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|151946797|gb|ABS19045.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 203 [Homo sapiens] Length = 792 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733146|gb|ABR09231.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 52 [Homo sapiens] Length = 1331 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733174|gb|ABR09245.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 61 [Homo sapiens] Length = 1293 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733164|gb|ABR09240.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 18 [Homo sapiens] Length = 1063 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733214|gb|ABR09265.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 33 [Homo sapiens] Length = 1116 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733194|gb|ABR09255.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 25 [Homo sapiens] Length = 1140 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733184|gb|ABR09250.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 60 [Homo sapiens] Length = 1320 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733144|gb|ABR09230.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 46 [Homo sapiens] Length = 1223 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733150|gb|ABR09233.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 13 [Homo sapiens] Length = 1016 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733210|gb|ABR09263.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 43 [Homo sapiens] Length = 1256 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733140|gb|ABR09228.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 58 [Homo sapiens] Length = 1263 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733202|gb|ABR09259.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 70 [Homo sapiens] Length = 1290 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733198|gb|ABR09257.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 21 [Homo sapiens] Length = 1124 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733170|gb|ABR09243.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 22 [Homo sapiens] Length = 1176 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733152|gb|ABR09234.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 59 [Homo sapiens] Length = 1444 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWXNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733208|gb|ABR09262.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 42 [Homo sapiens] Length = 1270 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733136|gb|ABR09226.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 57 [Homo sapiens] Length = 1268 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733196|gb|ABR09256.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 207 [Homo sapiens] Length = 1030 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733138|gb|ABR09227.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 35 [Homo sapiens] Length = 1207 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733154|gb|ABR09235.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 48 [Homo sapiens] Length = 1218 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPXTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733204|gb|ABR09260.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 44 [Homo sapiens] Length = 1132 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733186|gb|ABR09251.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 41 [Homo sapiens] Length = 1315 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733160|gb|ABR09238.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 37 [Homo sapiens] Length = 1224 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733168|gb|ABR09242.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 4 [Homo sapiens] Length = 955 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733190|gb|ABR09253.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 30 [Homo sapiens] Length = 1095 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733192|gb|ABR09254.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 19 [Homo sapiens] Length = 939 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733206|gb|ABR09261.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 54 [Homo sapiens] Length = 1376 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733142|gb|ABR09229.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 63 [Homo sapiens] Length = 1335 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|148733162|gb|ABR09239.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 65 [Homo sapiens] Length = 1399 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCXPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|295881352|gb|ABC87286.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 16 [Homo sapiens] Length = 1062 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|75706636|gb|ABA25869.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 67 [Homo sapiens] Length = 1363 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|62860933|gb|AAY16586.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 14 [Homo sapiens] Length = 975 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|59799376|gb|AAX07237.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 5 [Homo sapiens] Length = 1008 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|52839882|gb|AAU87837.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 11 [Homo sapiens] Length = 1046 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|299140211|ref|ZP_07033378.1| transglutaminase domain protein [Acidobacterium sp. MP5ACTX8] gi|298597849|gb|EFI54020.1| transglutaminase domain protein [Acidobacterium sp. MP5ACTX8] Length = 1065 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 16/121 (13%), Positives = 43/121 (35%), Gaps = 24/121 (19%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-----MSAFVQYSAGK 109 ++ +A + Q++ +A+E + P ++ L A Y GK Sbjct: 652 DEAAKLIHEAFQLEQSQSWEQAHEKLDAARALNP-----NQAYLWSNYGDLA-AHY--GK 703 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 +A + I +P ++V Y +++ + T + + +++++ Sbjct: 704 ANEAIADYNREIGDHPT-EDVPY----------RLLAATQLARHNTADAARTLHLLLQQH 752 Query: 170 T 170 Sbjct: 753 P 753 >gi|256376883|ref|YP_003100543.1| hypothetical protein Amir_2764 [Actinosynnema mirum DSM 43827] gi|255921186|gb|ACU36697.1| TPR repeat-containing protein [Actinosynnema mirum DSM 43827] Length = 683 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 35/125 (28%), Gaps = 23/125 (18%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +A +A + P A ++ L Y +G+ QA + +E Sbjct: 576 QATALADAGAPDQARTLIESLTTTHPTCAQAWAIRARLE-----YESGELPQALADFDES 630 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + + V Y + + D Q ++ R + + AR Sbjct: 631 VRL----LDAPEVRYNRALV-LEETGDYTR-------AAQDYREVLARTED----EDARD 674 Query: 181 YVTVG 185 + Sbjct: 675 RLAHC 679 >gi|227937277|gb|ACP43285.1| ubiquitously transcribed tetratricopeptide repeat Y-linked isoform 3 [Gorilla gorilla] Length = 1063 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSSAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|227937276|gb|ACP43284.1| ubiquitously transcribed tetratricopeptide repeat Y-linked isoform 2 [Gorilla gorilla] Length = 1240 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSSAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|227937275|gb|ACP43283.1| ubiquitously transcribed tetratricopeptide repeat Y-linked isoform 1 [Gorilla gorilla] Length = 1347 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSSAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|219855061|ref|YP_002472183.1| hypothetical protein CKR_1718 [Clostridium kluyveri NBRC 12016] gi|219568785|dbj|BAH06769.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 279 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 59/140 (42%), Gaps = 22/140 (15%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKS 96 +++ +DV DS+ D+ + +Y + K+++ ++ N + S + + A Sbjct: 142 KENGKDVLTDSMNDLAW---MYIEGKG--KDKDLNQGATILNEAIKISPSYNESYYA--- 193 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 A+V +Y ++ S +YI ++ Y ++G+ Y + + Sbjct: 194 ---LAYVYSHLERYDESISAANKYIENTKSNEEKSNAYNILGLDYEGN--------KDYE 242 Query: 157 LMLQYMSRIVERYTNSPYVK 176 +Y ++ ++ +N+ Y K Sbjct: 243 NAKKYFNQAIQLDSNNQYAK 262 >gi|218441289|ref|YP_002379618.1| peptidase M48 Ste24p [Cyanothece sp. PCC 7424] gi|218174017|gb|ACK72750.1| peptidase M48 Ste24p [Cyanothece sp. PCC 7424] Length = 667 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 + + + L EQ +S+A + + +F + Y+ G+ ++A +L Sbjct: 2 LLKDGLKALSEQRYSEAVDLLEEYCQTPNNFNHPNYT-QGQKALIRAYYANGQTEKALAL 60 Query: 117 GEE 119 +E Sbjct: 61 CQE 63 >gi|168260077|ref|ZP_02682050.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205350584|gb|EDZ37215.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 389 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A + +GR Y+ RG+Y A+ Q V+ D E E + L Y L E E Sbjct: 214 ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 271 Query: 250 VS 251 + Sbjct: 272 LR 273 >gi|158259177|dbj|BAF85547.1| unnamed protein product [Homo sapiens] Length = 1079 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|33188431|ref|NP_009056.3| histone demethylase UTY isoform 3 [Homo sapiens] gi|226693569|sp|O14607|UTY_HUMAN RecName: Full=Histone demethylase UTY; AltName: Full=Ubiquitously-transcribed TPR protein on the Y chromosome; AltName: Full=Ubiquitously-transcribed Y chromosome tetratricopeptide repeat protein gi|119612019|gb|EAW91613.1| ubiquitously transcribed tetratricopeptide repeat gene, Y-linked [Homo sapiens] Length = 1347 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|33188427|ref|NP_872600.1| histone demethylase UTY isoform 2 [Homo sapiens] Length = 1240 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|2580576|gb|AAC51842.1| ubiquitous TPR motif, Y isoform [Homo sapiens] Length = 1240 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|71908057|ref|YP_285644.1| TPR repeat-containing protein [Dechloromonas aromatica RCB] gi|71847678|gb|AAZ47174.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4 [Dechloromonas aromatica RCB] Length = 923 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 63/198 (31%), Gaps = 39/198 (19%) Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 ++Q F +A + + P ++L + A Y +Q A S ++ + Sbjct: 242 TLFQQQKFDEASTQLDALRKIAPKHP---QTLYLDAQASYQRKDFQGARSKLQDLLKFNT 298 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + L G Q+ R+ Y+++ + + + + Sbjct: 299 NNPT---ALQLAGAVEFQL--------RSYMQAETYLNKALSQAPE----------LRLA 337 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV-EAYVALALMD 244 R L + YL+ G+ A+ Q +L + A+ L E Y+ Sbjct: 338 RRIL------VAT-YLRNGQAAKALNTLQPMLDK----ADTDSALLTLAGETYLQNGDAK 386 Query: 245 EAREV---VSLIQERYPQ 259 +A E S + P Sbjct: 387 KAEEYFAKASKLDPNDPG 404 >gi|33188429|ref|NP_872601.1| histone demethylase UTY isoform 1 [Homo sapiens] gi|2580578|gb|AAC51843.1| ubiquitous TPR motif, Y isoform [Homo sapiens] gi|147897999|gb|AAI40392.1| Ubiquitously transcribed tetratricopeptide repeat gene, Y-linked [synthetic construct] gi|261857756|dbj|BAI45400.1| ubiquitously transcribed tetratricopeptide repeat gene, Y-linked [synthetic construct] Length = 1079 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|57113895|ref|NP_001009002.1| histone demethylase UTY [Pan troglodytes] gi|55976641|sp|Q6B4Z3|UTY_PANTR RecName: Full=Histone demethylase UTY; AltName: Full=Ubiquitously transcribed TPR protein on the Y chromosome; AltName: Full=Ubiquitously transcribed Y chromosome tetratricopeptide repeat protein gi|50844491|gb|AAT84369.1| UTY [Pan troglodytes] Length = 1079 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSSAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|2580574|gb|AAC51841.1| ubiquitous TPR motif, Y isoform [Homo sapiens] Length = 1347 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|84516650|ref|ZP_01004009.1| hypothetical protein SKA53_08561 [Loktanella vestfoldensis SKA53] gi|84509686|gb|EAQ06144.1| hypothetical protein SKA53_08561 [Loktanella vestfoldensis SKA53] Length = 273 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 9/59 (15%), Positives = 22/59 (37%), Gaps = 1/59 (1%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-KYQQAASLGEEY 120 +A L +F A + + +P + +A ++ + + G A + E + Sbjct: 156 RAQEALASGDFRGAVDQLSTFGTTYPGSPLAPEAAFIRGQALAALGEDTGAARAFLESF 214 >gi|313676765|ref|YP_004054761.1| hypothetical protein [Marivirga tractuosa DSM 4126] gi|312943463|gb|ADR22653.1| Tetratricopeptide TPR_1 repeat-containing protein [Marivirga tractuosa DSM 4126] Length = 469 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 24/196 (12%), Positives = 58/196 (29%), Gaps = 42/196 (21%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +++ + + + + +A + + + ++ A+ + + + + E+ Sbjct: 138 LFQMGMAYQQLGKYEEAIKNYKAVLEE---NIDHESAIYELAYCLDVTDQLEGSIAYYEK 194 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 +I P S + +Y +G+ ++ + A Sbjct: 195 FIDADPYSYH---AWYNLGV-------------------------VLHKLGKYEKAIEAY 226 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE----EAMARLVE 235 Y A+ Y G +A+ + L +S E E R+ E Sbjct: 227 EYAVAIDENFASA-------YFNMGNTYSALEKNNKSLDAFSQTLRIEGPSAEVFCRMAE 279 Query: 236 AYVALALMDEAREVVS 251 Y L D A + Sbjct: 280 TYDKLDQADLAIKYFQ 295 >gi|295881339|gb|AAY16581.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 53 [Homo sapiens] Length = 1207 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198 ++ + K + + QL A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYXSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|86211237|gb|ABC87285.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 47 [Homo sapiens] Length = 1342 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198 ++ + K + + QL A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|290974562|ref|XP_002670014.1| predicted protein [Naegleria gruberi] gi|284083568|gb|EFC37270.1| predicted protein [Naegleria gruberi] Length = 327 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 10/108 (9%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVAR 94 G S +D+ + + Y + LF + N+S A + +++ + P + Sbjct: 136 GVITNSYQDLQKAKEINPFHPEVFYRRGNLFYFDSNYSSAIKDYSKAIANHPDFYECYFN 195 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 + L Y + + E Y+ P N L+G+SY Sbjct: 196 RGL-----CYYQLKRLDRCIKDLETYLKHVPNDPNT---LKLLGISYY 235 >gi|229505052|ref|ZP_04394562.1| GGDEF family protein [Vibrio cholerae BX 330286] gi|229518396|ref|ZP_04407840.1| GGDEF family protein [Vibrio cholerae RC9] gi|229608056|ref|YP_002878704.1| GGDEF family protein [Vibrio cholerae MJ-1236] gi|229345111|gb|EEO10085.1| GGDEF family protein [Vibrio cholerae RC9] gi|229357275|gb|EEO22192.1| GGDEF family protein [Vibrio cholerae BX 330286] gi|229370711|gb|ACQ61134.1| GGDEF family protein [Vibrio cholerae MJ-1236] Length = 640 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100 D+ L + D +Y L + + A +Y N+ + + Sbjct: 188 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 247 Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + G+Y+++ E+ + P + + YV+ +G +Y ++ V DQ Sbjct: 248 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 305 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L+Y++ + + LA + K +Y AI Sbjct: 306 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 347 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A S++ +AY+ LA + EA + Sbjct: 348 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 375 >gi|153871493|ref|ZP_02000650.1| Tetratricopeptide TPR_2 [Beggiatoa sp. PS] gi|152072041|gb|EDN69350.1| Tetratricopeptide TPR_2 [Beggiatoa sp. PS] Length = 933 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 34/239 (14%), Positives = 67/239 (28%), Gaps = 47/239 (19%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-------QCSRDFPFAGVARKSLLMSAFV 103 R +++ + ++ A E + + F + L V Sbjct: 402 PPSYRAMIQLFIEGEKAYDIADYLVASEKWQAGLKRAHKLEHKF----YTSQFLHHLGLV 457 Query: 104 QYSAGKYQQAA-------------SLGEEYITQYPESKNVDYVY-----YLVGMSYAQMI 145 +Y +A + + + S + VY Y + Y Q Sbjct: 458 YKQLEQYPKAIEYFDSALTISRNIADLQRFGA---GSSAIGEVYQDLEQYSKALRYYQQA 514 Query: 146 RDVPYDQRATKLMLQYMSRIVERY---TNSPYVKGARFY---VTVGRNQLAAKE----VE 195 + D L ++ + Y + +N+ KE Sbjct: 515 VVIFRDIGNKFLEGHCLTNMGTTYFELGQHEKALEHSQQALIINRIKNR--QKEGTNLYN 572 Query: 196 IGRYYLKRGEYVAAIPRFQLVL---ANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 IGR Y R +Y A+ +Q L ++D + + AY+ L +A + Sbjct: 573 IGRIYAHRSQYSIALNYYQQALAINREFNDKYEEGSILNNIGIAYMELGQNQDALIYLK 631 >gi|145524609|ref|XP_001448132.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124415665|emb|CAK80735.1| unnamed protein product [Paramecium tetraurelia] Length = 879 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 62/195 (31%), Gaps = 50/195 (25%) Query: 62 EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + K+++F KA E++ F KS+ F Y A S + Sbjct: 274 SQGFDARKKEDFIKAIEFYTMALM----FNPNHFKSIFNRGFAFDKLRMYNDAISDYTKA 329 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I +SKN Y YY G+SY + L ++ ++ +E S Sbjct: 330 IEM--DSKNA-YAYYNRGISYDKK--------GDYNLAIKDFAKSIELDP-SK------- 370 Query: 181 YVTVGRNQLAAKEVEIGRYY------LKRGEYV-AAIPRFQLVLANYSDAEHAEEAMARL 233 +Y +K+ V AI F + D H +A Sbjct: 371 ----------------ADFYHNKGFAMKKKNLVREAILEFNECIRL--DKNHF-KAYYNR 411 Query: 234 VEAYVALALMDEARE 248 Y L D+A++ Sbjct: 412 ANCYEKLGDFDKAQQ 426 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 11/111 (9%), Positives = 38/111 (34%), Gaps = 13/111 (11%) Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 ++ ++L + G++ +A + + I P + + Y G+ ++ Sbjct: 570 YSQENTRTLNNRGYCLAKLGQFDEAIADYTKAINLDPVNIH---AIYNRGICNERI---- 622 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + ++ + +++ + A F + + ++ I Y Sbjct: 623 ----GEFRKAIEDFTSVIQL--QNDQGANAYFNRGCCYDNIGEMDLAIADY 667 >gi|332667474|ref|YP_004450262.1| tetratricopeptide domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332336288|gb|AEE53389.1| tetratricopeptide domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 233 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 49/166 (29%), Gaps = 24/166 (14%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 F++A+ + + + D Y V L + A Y Sbjct: 82 SFAVAMLTTLPGGFKGFPKIIEDFPGTPAANLANYYSGVCLLNLGKYEAAISYLK----- 136 Query: 87 FPFAGVARKSLLM-------SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 + K +M + QA S ++ + +YL + Sbjct: 137 ----DFSAKGAIMPIMKNGALGDAYSELKDFAQAKSYYKKAVNVTKNDMLTP--FYLKRL 190 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 + M+ ++ D A + Y + + Y ++P + A Y+ Sbjct: 191 A---MLAEMEKDYAAAR---DYYQELKDEYPSAPEGQDAEKYLIYL 230 >gi|328867286|gb|EGG15669.1| hypothetical protein DFA_10511 [Dictyostelium fasciculatum] Length = 1089 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 35/162 (21%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS---------------AFVQYSAG 108 A + + KA + ++ R P + + + L AF ++S Sbjct: 338 AKVLMAAGQLEKAQAFIDKAKRSSPKSERVQNAQLELSHLVEVDKINKLMDNAFGEFSRN 397 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYY-LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 ++ QA + I S V Y L + + + ++ ++I+E Sbjct: 398 EFPQAIETFNKCIEINSHSP----VLYELRALCHMAS--------KNNAAAIEDSNKILE 445 Query: 168 ---RYTNSPYVKGARFYVTVGRNQLAAKEVEIGR----YYLK 202 + V N +A K + + +Y K Sbjct: 446 IDHNWPRKETVLSGFMNKDGQINVMAKKRWFVLKSHFLFYFK 487 >gi|313246466|emb|CBY35372.1| unnamed protein product [Oikopleura dioica] Length = 406 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 51/145 (35%), Gaps = 18/145 (12%) Query: 43 SRDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 S+ + + D +Y + Y + + L Q + E F + S F +A + L Sbjct: 257 SKSKGTERLKDQKYDLSIKHYNRVISLLDHQETKENNEKFEEISSKFKSLKLA--AFLNL 314 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + V + +A S ++ I PE++ ++ G + + + Sbjct: 315 SLVYPKIAENYKAISAADDAIKIDPENEK---AFFRRGTARMAGND--------LEAAIS 363 Query: 161 YMSRIVERYTNSPYVKGARFYVTVG 185 ++VE + K A + + Sbjct: 364 DFKKVVEV---NKENKTAAKNMKIC 385 >gi|313228454|emb|CBY23605.1| unnamed protein product [Oikopleura dioica] Length = 406 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 51/145 (35%), Gaps = 18/145 (12%) Query: 43 SRDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 S+ + + D +Y + Y + + L Q + E F + S F +A + L Sbjct: 257 SKSKGTERLKDQKYDLSIKHYNRVISLLDHQETKENNEKFEEISSKFKSLKLA--AFLNL 314 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + V + +A S ++ I PE++ ++ G + + + Sbjct: 315 SLVYPKIAENYKAISAADDAIKIDPENEK---AFFRRGTARMAGND--------LEAAIS 363 Query: 161 YMSRIVERYTNSPYVKGARFYVTVG 185 ++VE + K A + + Sbjct: 364 DFKKVVEV---NKENKTAAKNMKIC 385 >gi|301772582|ref|XP_002921709.1| PREDICTED: peptidyl-prolyl cis-trans isomerase D-like [Ailuropoda melanoleuca] Length = 370 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 2/121 (1%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQRE 59 + V G I +A +L AL+ +I C L + Q + + L+++ D + Sbjct: 250 LRYVEGSKAVIEQADRLKLQPVALSCVLNIGACKLKMSDWQGAVNSCLEALEIDPSNTKA 309 Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + + + +A + P A ++ L+ + A K ++ A+ + Sbjct: 310 LYRKAQGWQGLKEYDQALADLKKAQEIAP-EDKAIQAELLKVKQKIKAQKDKEKAAYAKM 368 Query: 120 Y 120 + Sbjct: 369 F 369 >gi|239618021|ref|YP_002941343.1| putative transcriptional regulator, Crp/Fnr family [Kosmotoga olearia TBF 19.5.1] gi|197321139|gb|ACH68643.1| hypothetical protein KO_27 [Kosmotoga olearia TBF 19.5.1] gi|239506852|gb|ACR80339.1| putative transcriptional regulator, Crp/Fnr family [Kosmotoga olearia TBF 19.5.1] Length = 362 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 21/53 (39%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + ++ +Y KAV L++ ++ A Y F + + R + A Sbjct: 133 PPLIIGEKPLYRKAVSLLRKGDYDGAIAYLESYLSQFANSPLERPVRMFLALA 185 >gi|157828188|ref|YP_001494430.1| hypothetical protein A1G_01780 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932890|ref|YP_001649679.1| Tol system periplasmic protein [Rickettsia rickettsii str. Iowa] gi|157800669|gb|ABV75922.1| hypothetical protein A1G_01780 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165907977|gb|ABY72273.1| Tol system periplasmic component [Rickettsia rickettsii str. Iowa] Length = 245 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 18/46 (39%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A Y K +A + +I +YP S + Y+ G + + Sbjct: 122 DLALAAYKDNKLTEAKDKFKNFIQKYPNSLLISNAYFWYGECFFKQ 167 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 14/133 (10%), Positives = 45/133 (33%), Gaps = 12/133 (9%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ- 111 D+ ++ Y+ A+ K+ ++A + F + +P + + + + Y Sbjct: 113 DIAPDKQAYDLALAAYKDNKLTEAKDKFKNFIQKYPNSLLISNAYFWYGECFFKQKDYNG 172 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + + Y P+ + +S ++ + T+ +++ + + Sbjct: 173 AAVNYLKGYKEL-PKGAKSSDGLLKLALSLGEL--------KKTQEACNMLAKFDKEFPT 223 Query: 172 SPYVKGARFYVTV 184 + A + Sbjct: 224 NRTA--ASKKMAE 234 >gi|124024536|ref|YP_001018843.1| hypothetical protein P9303_28481 [Prochlorococcus marinus str. MIT 9303] gi|123964822|gb|ABM79578.1| Hypothetical protein P9303_28481 [Prochlorococcus marinus str. MIT 9303] Length = 462 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 46/152 (30%), Gaps = 31/152 (20%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS-------A 107 + Y + + +++ A FN+ P A Y+ + Sbjct: 247 QDAAAYYNRGNAKDELKDYQGAISDFNKAIEINP--QYAA--------AYYNRGIVKRES 296 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G Q+A + + I P+ + ++Y+ V + T+ + +R +E Sbjct: 297 GDTQEAIADFNKAIEINPQ----------LAIAYSNRGI-VKRESGDTQEAIADFNRAIE 345 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y + + L + I Y Sbjct: 346 INP--EYAAAYNNR-GIAKKNLGNYQEAIADY 374 >gi|26325222|dbj|BAC26365.1| unnamed protein product [Mus musculus] Length = 457 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVD-YVYYLVGM 139 + + A + ++A + ++ + P+ + Y+ Y GM Sbjct: 170 YAHFKANRLEKAVAAAYTFLQRNPKHELTAKYLNYYRGM 208 >gi|117923356|ref|YP_863973.1| tetratricopeptide TPR_4 [Magnetococcus sp. MC-1] gi|117607112|gb|ABK42567.1| Tetratricopeptide TPR_4 [Magnetococcus sp. MC-1] Length = 584 Score = 37.4 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 2/68 (2%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 KA + S+A E D + +LM A Q + G++Q+A ++ Sbjct: 116 KARAHMALGQQSQALEVLESLPTD--TIDHTPELVLMMAQAQLANGQFQEARGRFSRFLV 173 Query: 123 QYPESKNV 130 + P + Sbjct: 174 ENPGHPHA 181 >gi|281412222|ref|YP_003346301.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga naphthophila RKU-10] gi|281373325|gb|ADA66887.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga naphthophila RKU-10] Length = 272 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 1/68 (1%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQ 112 V ++Y A+ E ++ +A E F R+ P L Y+ G Y++ Sbjct: 11 VSVANDLYSSALSAYLEGDYRRALELFENALREDPTIEERDSLVKLKMGICAYAIGDYEK 70 Query: 113 AASLGEEY 120 A + + Sbjct: 71 ARAYLSNF 78 >gi|238597707|ref|XP_002394401.1| hypothetical protein MPER_05711 [Moniliophthora perniciosa FA553] gi|215463378|gb|EEB95331.1| hypothetical protein MPER_05711 [Moniliophthora perniciosa FA553] Length = 282 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 36/137 (26%), Gaps = 20/137 (14%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARK 95 S+ S D E+ K + + + +A + P + + Sbjct: 24 ASSSAPRQTGPSPQDKAKAEELKAKGNSLMSSKKYDEAIAAYGEAIALDSTNPI-YYSNR 82 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + S G + A E + N Y+ +G + + Sbjct: 83 AA-----AYSSKGDHLSAIGDAE--LAL-ASDPNFVKAYHRLGHAQYCLSD--------F 126 Query: 156 KLMLQYMSRIVERYTNS 172 K R ++ N+ Sbjct: 127 KAAADAFERGLKLDPNN 143 >gi|162454222|ref|YP_001616589.1| hypothetical protein sce5945 [Sorangium cellulosum 'So ce 56'] gi|161164804|emb|CAN96109.1| 533aa long hypothetical protein [Sorangium cellulosum 'So ce 56'] Length = 802 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 26/68 (38%), Gaps = 1/68 (1%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA-RKSLLMSAFVQYSAGKYQ 111 + R + A L + +++ +A NQ +P A +L + + + +Y Sbjct: 66 EQRTPAQRIADAQLLMGSRDYERAANVLNQVVEKYPDHPTAFPDALTLLGETYFRSKQYL 125 Query: 112 QAASLGEE 119 A + + Sbjct: 126 SARRVFQR 133 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 17/51 (33%), Gaps = 1/51 (1%) Query: 204 GEYVAAIPRFQLVLANYSDAE-HAEEAMARLVEAYVALALMDEAREVVSLI 253 +Y A V+ Y D +A+ L E Y AR V I Sbjct: 84 RDYERAANVLNQVVEKYPDHPTAFPDALTLLGETYFRSKQYLSARRVFQRI 134 >gi|115378279|ref|ZP_01465447.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|310821098|ref|YP_003953456.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115364721|gb|EAU63788.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|309394170|gb|ADO71629.1| Tetratricopeptide repeat family protein [Stigmatella aurantiaca DW4/3-1] Length = 479 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 8/76 (10%), Positives = 27/76 (35%), Gaps = 3/76 (3%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 ++ ++ A+ ++ +A + F Q + + + + + G+ Sbjct: 67 SEDSGPHALFLSALAAFDAGDYDRARKGFEQVVQT---SPQSLNAQFNLGLIAERQGRLA 123 Query: 112 QAASLGEEYITQYPES 127 A + E+ + + P Sbjct: 124 DAQAAYEKVLAKEPGH 139 >gi|90414116|ref|ZP_01222098.1| hypothetical protein P3TCK_07354 [Photobacterium profundum 3TCK] gi|90324788|gb|EAS41321.1| hypothetical protein P3TCK_07354 [Photobacterium profundum 3TCK] Length = 391 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 8/77 (10%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYSAGKYQQAASLGEE 119 E A L L+E ++ KA + R +++ + A Y + +A ++ Sbjct: 313 ELAQLLLQEGHYHKALTELERVKRKD------KQADVELAKVRAYYKLDNFDKAIIHAKQ 366 Query: 120 YITQYPESKNVDYVYYL 136 P S + +V YL Sbjct: 367 ANNITPSSASKSWVKYL 383 >gi|61657362|emb|CAI44279.1| hypothetical protein [Thermotoga naphthophila RKU-10] Length = 278 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 1/68 (1%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQ 112 V ++Y A+ E ++ +A E F R+ P L Y+ G Y++ Sbjct: 17 VSVANDLYSSALSAYLEGDYRRALELFENALREDPTIEERDSLVKLKMGICAYAIGDYEK 76 Query: 113 AASLGEEY 120 A + + Sbjct: 77 ARAYLSNF 84 >gi|37680457|ref|NP_935066.1| hypothetical protein VV2273 [Vibrio vulnificus YJ016] gi|37199205|dbj|BAC95037.1| conserved hypothetical protein [Vibrio vulnificus YJ016] Length = 265 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 16/127 (12%), Positives = 46/127 (36%), Gaps = 15/127 (11%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ +R + + + +S + + +++ G+ Y Sbjct: 152 YQNAVDLILKKRDYAGAIAAFKQFQIDFPDSNFAPNSHYWL--------------GQLYF 197 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + + A F V+ +Y D+ +A+ +L + ++A++ + +P Sbjct: 198 AQKQDKEAAKSFAAVV-SYKDSNKRADALVKLGDIAARNNNPEQAKKYYQQAIDEHPGSA 256 Query: 262 WARYVET 268 A+ ++ Sbjct: 257 SAKVAKS 263 >gi|294508598|ref|YP_003572657.1| Aerotolerance-related exported protein [Salinibacter ruber M8] gi|294344927|emb|CBH25705.1| Aerotolerance-related exported protein [Salinibacter ruber M8] Length = 378 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 18/80 (22%), Gaps = 13/80 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLG 117 +E A + A E + + L + A Sbjct: 159 FEAANEAYDRGRYETAVEAYRAVLDAGH------ESAALYHNLGNAYVRLDRTGLAVWAY 212 Query: 118 EEYITQYPESK----NVDYV 133 E P N++YV Sbjct: 213 ERGRRLRPGDPRLQHNLEYV 232 >gi|282900527|ref|ZP_06308471.1| conserved hypothetical protein [Cylindrospermopsis raciborskii CS-505] gi|281194580|gb|EFA69533.1| conserved hypothetical protein [Cylindrospermopsis raciborskii CS-505] Length = 171 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 54/140 (38%), Gaps = 16/140 (11%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR-DFPFAGVARKSLLMSAFVQYSAGK 109 ++ + +Y + + + + ++ + + + F + A + + + G+ Sbjct: 3 TENLETAKNLYSQGKIAFENGEYQQSVDNLEKATSLLFQNSRFAGEVNIWLVNAYEATGR 62 Query: 110 YQQAASLGEEYITQYP----ESKNVDYVYYLVG---------MSYAQMIRDVPYDQRATK 156 Q+A +L +E ++ +P +S+ VY L M+ + Q T Sbjct: 63 SQEAIALCQE-LSHHPHYEVKSQAKRLVYILKAPKLKRPKEWMTEIPDFATISERQTKTL 121 Query: 157 LMLQYMSRIVERYTNSPYVK 176 + Q S + ++ +S YV Sbjct: 122 IAPQK-STLPKKSPDSEYVD 140 >gi|268326065|emb|CBH39653.1| conserved hypothetical secreted protein, containing tetratricopeptide repeats [uncultured archaeon] Length = 442 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 41/153 (26%), Gaps = 40/153 (26%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV----------------------A 93 +++ + N+ A FN+ P + Sbjct: 11 EEQQYINQGKDEYNRGNYDAAIYLFNKAVELNPDNEYLYNDLGLCYVALDDSDLAIPEFS 70 Query: 94 RKSLLMS----AF-----VQYSAGKY--QQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 + L S A+ Y G A S + I P + + YY G++Y Sbjct: 71 KAIELNSDCVEAYYNRGLAYYGQGTSGAPDAISDFTKAIELDPGNVD---AYYNRGLAYN 127 Query: 143 QMIRD----VPYDQRATKLMLQYMSRIVERYTN 171 + +R P + +++E Sbjct: 128 KQVRGGEPFTPEHMESYGKARADFDKVLELDPE 160 >gi|254491164|ref|ZP_05104345.1| tetratricopeptide repeat domain protein [Methylophaga thiooxidans DMS010] gi|224463677|gb|EEF79945.1| tetratricopeptide repeat domain protein [Methylophaga thiooxydans DMS010] Length = 596 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 31/250 (12%), Positives = 79/250 (31%), Gaps = 45/250 (18%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCS 84 + F++ + L + Q ++ + + ++ Y + N A +F Sbjct: 314 VLFALGLLALEDKDGQEAKSFFSQLLKQGDPTQQATYFMGLSEQMNGNLDAALVWFASVP 373 Query: 85 ---RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 F + + G+ +A + PE + Y Sbjct: 374 VHSNRF------DNAQNNYINILLERGELDKARAHLAAMRQDLPE----------QALQY 417 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL--AAKEVEIGRY 199 + + ++ ++ + +Y S ++ +R + N+L K++ R+ Sbjct: 418 YLFEASILREADQSQDAFDLLTDAMGQYPQSEELRYSRAMIAESINKLDVLEKDL---RW 474 Query: 200 YLKRGEYVA-AIPRFQLVLANYSDAEHAEEAMARLVE-----------------AYVALA 241 L++ A A+ L + + +EA+ + + AY L Sbjct: 475 ILEKDPNNAQALNALGYTLTD--RTDRHQEALVMIQKALEIKPGDPFYLDSLGWAYYRLG 532 Query: 242 LMDEAREVVS 251 +D+A + + Sbjct: 533 ELDKAEKYLR 542 >gi|188995741|ref|YP_001929993.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277] gi|188595421|dbj|BAG34396.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277] Length = 1160 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%) Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 + + ++ + ++ +L Y + E + + RL Y + EA LI + Sbjct: 612 AVFNERMEKFDESADTYETLLRRYPNYEKKMDVLYRLFMLYTRMNNKPEAERCRVLILQY 671 Query: 257 YPQGYWARYVET 268 YP+ A+ + Sbjct: 672 YPEDNLAKALSN 683 >gi|94501052|ref|ZP_01307576.1| TPR repeat protein [Oceanobacter sp. RED65] gi|94426799|gb|EAT11783.1| TPR repeat protein [Oceanobacter sp. RED65] Length = 209 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 58/158 (36%), Gaps = 13/158 (8%) Query: 18 QLYKFALTIF-FSIAVCFLVGWERQSSRDVYLDSVTDVRYQR-EVYEKAVLFLKEQNFSK 75 + K +L + ++ CF +++ V ++ + + Y+KA+ + Q +S+ Sbjct: 6 KFIKTSLIVSMLFLSGCFASAPTKENVEANVQSKVIEIPDEAAKAYKKAITHMNHQQWSQ 65 Query: 76 AYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 A ++D+P A ++ S ++ +A + ++ I + P + Sbjct: 66 AKSLLVNMTQDYPQLSGPFANLGVIAS-----QQEQWDEAVAYLQKAIEKKPNNVK---A 117 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 +G Y Q + ++ + Y N Sbjct: 118 LNQLGWVYRQQGQ-FERAEQQYLKAIDADKDYAASYRN 154 >gi|152984880|ref|YP_001350232.1| hypothetical protein PSPA7_4896 [Pseudomonas aeruginosa PA7] gi|150960038|gb|ABR82063.1| lipoprotein, putative [Pseudomonas aeruginosa PA7] Length = 268 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 4/55 (7%) Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 Y +G+ Y DQR Y R+V + + + A+ + V R + Sbjct: 94 LYQIGLIYMSRYN----DQRDDARATDYFQRVVREFPGTHAAEHAQARLLVMRQR 144 >gi|332708799|ref|ZP_08428770.1| serine/threonine protein kinase [Lyngbya majuscula 3L] gi|332352341|gb|EGJ31910.1| serine/threonine protein kinase [Lyngbya majuscula 3L] Length = 606 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 37/266 (13%), Positives = 76/266 (28%), Gaps = 71/266 (26%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRY-------------QREVYEKAVLFLK 69 L + + FL + D D TD + + + E+A K Sbjct: 374 ILGVSLLLWKTFLSAQPTGENTDYKTDYKTDYKTDYKTDYKTEATVTEEQFLEEAEQLRK 433 Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-------SAGKYQQAASLGEEYIT 122 + + +A + ++Q +A+K+ A + K + A + + Sbjct: 434 SRQYQEALKLYDQ--------AIAKKA--DFAEAYWGRCYSLNKLQKPEMAIVACNDALH 483 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN----------- 171 P + G ++ Q R V L+ ++ + + Sbjct: 484 FKPNYPEAVWSL---GQAFDQQQRSV--------EALRLYNQALTLKPDLTEAWLSQGIT 532 Query: 172 ------SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 S A + LA ++ +GE + RF + Sbjct: 533 LQKLGRSVEAITALEKAIALQRNLAEA-------WMTKGEAQMTLGRFNQAI------TS 579 Query: 226 AEEAMARLVEAYVALALMDEAREVVS 251 +A+ AL L +AR+ + Sbjct: 580 LNKALQIEPNHRNALKLRQQARKKLQ 605 >gi|242214311|ref|XP_002472979.1| predicted protein [Postia placenta Mad-698-R] gi|220727951|gb|EED81856.1| predicted protein [Postia placenta Mad-698-R] Length = 944 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 20/100 (20%) Query: 71 QNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 F +A + + + +F F+ + A QY AG + + + +P+ Sbjct: 74 NEFKEAADNYTKSTQLDDEFVFSH------IQLAVAQYKAGNTANSMATFRRTLKAFPQR 127 Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 + YY ++ DQ+ + R +E Sbjct: 128 SE-PHNYY----------GELLLDQQRFGDAVDKFERAIE 156 >gi|94267436|ref|ZP_01290875.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1] gi|93452004|gb|EAT02706.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1] Length = 560 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 57/174 (32%), Gaps = 30/174 (17%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 LL A Y G +++A ++ + + P S+ +G++ R+ P Sbjct: 368 LLEEARAAYRLGDHEEAWRAYQQALEKSPRSREAA-----MGLATVAQSRNDPL------ 416 Query: 157 LMLQYMSRIVERYTNSPYVKG----------ARFYVTVGRNQLAAK------EVEIGRYY 200 L +I+ER + A + V R+ L + +G + Sbjct: 417 TALHLYQQILERDPGDRQAQQGLVSLAPALAAAGHGEVLRDLLNRHPQAAPLHLTMGNLH 476 Query: 201 LKRGEYVAAIPRFQLVLANY--SDAEHAEEAMAR-LVEAYVALALMDEAREVVS 251 +GE+ A +Q L + + A L + L +A E Sbjct: 477 ASQGEWTRARRAYQNALEEARRQASGDIDPAYHYNLAVSLDQLGQTGQALEHYR 530 >gi|51598471|ref|YP_072659.1| surface-located membrane protein 1 [Borrelia garinii PBi] gi|51573042|gb|AAU07067.1| surface-located membrane protein 1 [Borrelia garinii PBi] Length = 906 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK +N+ A ++ P + + A G QA S E+ Sbjct: 735 LYLKASINLKNENYQNAISLYSSVIEKNPEN---TSAYINLAKAYEKLGNKAQAISTLEK 791 Query: 120 YI 121 I Sbjct: 792 II 793 >gi|27807467|ref|NP_777182.1| aspartyl/asparaginyl beta-hydroxylase [Bos taurus] gi|2498164|sp|Q28056|ASPH_BOVIN RecName: Full=Aspartyl/asparaginyl beta-hydroxylase; AltName: Full=Aspartate beta-hydroxylase; Short=ASP beta-hydroxylase; AltName: Full=Peptide-aspartate beta-dioxygenase gi|162694|gb|AAA03563.1| aspartyl (asparaginyl) beta hydroxylase [Bos taurus] gi|296480620|gb|DAA22735.1| aspartyl/asparaginyl beta-hydroxylase [Bos taurus] Length = 754 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 17/80 (21%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 + + + +V +Y SP GAR+ + LA K +R + Sbjct: 348 RKRGKIEEAVNAFEELVRKYPQSP---GARYGKAQCEDDLAEK---------RRSNEI-- 393 Query: 210 IPRFQLVLANYSDAEHAEEA 229 + + Y +A +A Sbjct: 394 ---LRRAIETYQEAASLPDA 410 >gi|317121394|ref|YP_004101397.1| hypothetical protein Tmar_0549 [Thermaerobacter marianensis DSM 12885] gi|315591374|gb|ADU50670.1| hypothetical protein Tmar_0549 [Thermaerobacter marianensis DSM 12885] Length = 430 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 32/272 (11%), Positives = 63/272 (23%), Gaps = 89/272 (32%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--------------------------------- 88 ++A + + +A P Sbjct: 160 QQAAEAFRNGRWDEARRLLEPLLSRHPQEADLWLLWGLTLWRAGSIHEAASALLRVDQCA 219 Query: 89 -----------------FAGVARKSLL--------MSAFVQYSAGKYQQAASLGEEYITQ 123 F + L + A++ AG++++A + + + Sbjct: 220 DTLGRLAATARLRWEVEFQPWPLRVELPSAPGLDLVQAYLLAQAGRHEEALAQLDGALGL 279 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 P L + R A + + +I + A + Sbjct: 280 NPGFHA---ARLLKALILVDAARSGARGDDAFHQAVALLQQIPRDDPLYLWAVAA---MG 333 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM----ARLVEAYVA 239 + E+ + A RF+ EA+ L AY A Sbjct: 334 QAFREAGQPELAV-------TALRPAT-RFRR----------DPEALKAIRYELALAYHA 375 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271 L ARE ++ I R L++ Sbjct: 376 LGDRRRAREQLARIVTEDIG---YRDARRLLE 404 >gi|311262179|ref|XP_003129052.1| PREDICTED: peptidyl-prolyl cis-trans isomerase D-like [Sus scrofa] Length = 370 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 49/121 (40%), Gaps = 2/121 (1%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQRE 59 + V G EA +L AL+ +I C L + Q + D L+++ D + Sbjct: 250 LRYVDGAKAVSEEADGLKLQPVALSCMLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKA 309 Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A + + + +A + P A ++ L+ + A K ++ A+ + Sbjct: 310 LYRRAQGWQGLKEYDQALAALKKAQEIAP-EDKAIQAELLKVKQKIKAQKDKEKAAYAKM 368 Query: 120 Y 120 + Sbjct: 369 F 369 >gi|307184736|gb|EFN71058.1| 40 kDa peptidyl-prolyl cis-trans isomerase [Camponotus floridanus] Length = 367 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 31/97 (31%), Gaps = 21/97 (21%) Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 ++ YV + N A YLKR EY I VL + +A Sbjct: 258 PDTIYVSLVDLKSVLLLNLAA--------VYLKRKEYRKVIHFCNEVLET-DNTNG--KA 306 Query: 230 MARLVEAY-----VALALMDEAREVVSLIQERYPQGY 261 + R +AY L ++D + YP Sbjct: 307 LFRRGQAYSGLNEYKLGIVDL-ERAFEI----YPNDK 338 >gi|304310431|ref|YP_003810029.1| hypothetical protein HDN1F_07870 [gamma proteobacterium HdN1] gi|301796164|emb|CBL44370.1| Hypothetical protein HDN1F_07870 [gamma proteobacterium HdN1] Length = 920 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 60/173 (34%), Gaps = 44/173 (25%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQ 104 D+ + + A + L + N S+A F + A ++L S + VQ Sbjct: 698 DNALPSDSNSLLLKLARIHLHQGNASQADALFER----------ALQALENSGYEEQNVQ 747 Query: 105 YSA-GKYQQAASLGEEY------ITQY--PESKNVDYVYYLVGMSYAQMIRDVP----YD 151 + +Y A S + Y +Y P++++ DY + + D+ + Sbjct: 748 WMTLKEYSAALSNQQRYADVLSAFDRYPIPDTEHSDY--------WYTQMLDIRAWALFS 799 Query: 152 QRATKLMLQYMSRIVERY----T--NSPYV-KGARFYVTVGRNQLA--AKEVE 195 TK ++ RY S Y A + V ++ LA EV Sbjct: 800 NGQTKEAAALYEQLASRYQSSKPAYRSKYALPDALAKLLVVQHVLAGGGNEVH 852 >gi|260427430|ref|ZP_05781409.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45] gi|260421922|gb|EEX15173.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45] Length = 510 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 23/58 (39%), Gaps = 14/58 (24%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ L +++++ +A E F P L + Y G+Y+ A + + Sbjct: 333 QQGRLAYEKRDYERAAELFTD-----P---------LWRGYALYKDGQYKAAIEVLDR 376 >gi|145473829|ref|XP_001462578.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124430418|emb|CAK95205.1| unnamed protein product [Paramecium tetraurelia] Length = 1058 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 39/95 (41%), Gaps = 13/95 (13%) Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 VA + L ++ K ++A + + Y ++Y + + YL G+ Y + Sbjct: 140 EVATSTELNEGKKLFTDNKTEEALKIFQTYQSKYGLNPD---ALYLSGLCYMSL------ 190 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 DQ + ++ +++ + Y + A Y+ + Sbjct: 191 DQE--EKYIEQFQTLIKTFPT--YKRTAYMYLAIC 221 >gi|16329708|ref|NP_440436.1| hypothetical protein slr2048 [Synechocystis sp. PCC 6803] gi|1652192|dbj|BAA17116.1| slr2048 [Synechocystis sp. PCC 6803] Length = 398 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 24/186 (12%), Positives = 58/186 (31%), Gaps = 35/186 (18%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ-------REVYEKAVLFLKEQNFSK 75 + + F AV + S + + R E+ + ++ NF + Sbjct: 33 LIPLLFGAAVSAQSPSQTNPSNLPDVTPLLAQRSATDDRRQFNELLRQGKAYVDNGNFPQ 92 Query: 76 AYEYFNQ---CSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 A + Q + L ++ G++ +A+ ++ + P + + Sbjct: 93 AIAIYQQAAMLD--------GENAELFGSMGYLYARQGQFAEASRSFQQALRVNPNNPD- 143 Query: 131 DYVYY-LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 YY +G SYA+ Q + + +S + ++ + +G L Sbjct: 144 ---YYDGLGFSYAR--------QGLLNEAASAYATAISLGPSSR--ESVKYRLALGIIML 190 Query: 190 AAKEVE 195 + Sbjct: 191 QQGDYN 196 >gi|330910839|gb|EGH39349.1| biofilm PGA outer membrane secretin PgaA [Escherichia coli AA86] Length = 807 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 76/229 (33%), Gaps = 41/229 (17%) Query: 55 RYQREVYEKAV--LFLKEQNFSKAYEYFNQCSRDFPFAGVARKS-LLMSAFVQYSAGKYQ 111 Q + Y++ ++ A Q P K+ LL A++ G+YQ Sbjct: 128 EPQNKDYQRGQILTLADAGHYDTALFKLKQLKSGAP-----DKANLLAEAYIYKLTGRYQ 182 Query: 112 QAASLGEEYI------TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 E + QYP +YV L A I D + + R+ Sbjct: 183 DELRAMTESLPENASKQQYPT----EYVLALRNNQLAAAIDDANLTPDIRADIHAELVRL 238 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKE-VEI---------GRYYLKRGEYVAAI---PR 212 T S + LA +EI +Y + +++ A+ R Sbjct: 239 SFMPTRSE-----NERYAIADRALAQYAALEILWHDNPDRTAQYQRIQVDHLGALLTRDR 293 Query: 213 FQLVLANYSDAEHAEE-----AMARLVEAYVALALMDEAREVVSLIQER 256 ++ V+++Y + + A+ + AY+ +A+ +++ + Sbjct: 294 YRDVISHYQRLKKTGQIIPPWALYWVASAYLKDQQPKKAQSIMTELFYN 342 >gi|298369448|ref|ZP_06980766.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str. F0314] gi|298369783|ref|ZP_06981100.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str. F0314] gi|298370546|ref|ZP_06981862.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str. F0314] gi|298370633|ref|ZP_06981948.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str. F0314] gi|298281243|gb|EFI22733.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str. F0314] gi|298282006|gb|EFI23495.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str. F0314] gi|298282340|gb|EFI23828.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str. F0314] gi|298283451|gb|EFI24938.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str. F0314] Length = 50 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 14/39 (35%) Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 MA + AY L A + ++ +P + + Sbjct: 1 MAMMELAYKKLGKPQLAADSRRILAGNFPASPYLQKPWR 39 >gi|257058493|ref|YP_003136381.1| hypothetical protein Cyan8802_0599 [Cyanothece sp. PCC 8802] gi|256588659|gb|ACU99545.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802] Length = 263 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 73/245 (29%), Gaps = 60/245 (24%) Query: 30 IAVCFLV-GWERQSSRDVYLDSVTDVRYQRE-------------------VYEKAVLFLK 69 I CF+ G SS+ + S + ++ + + + + + Sbjct: 17 ILGCFVFLGCSTNSSQSIPKTSEIPITKNQKPIETTAPTTTAEDRKNAANLRQLGLQYRQ 76 Query: 70 EQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 ++N+ KA E + L++ + + AGK A E +T + Sbjct: 77 QENYPKAIESLEKSVSLDSKNLSG------LVLLGWTLHLAGKSPSAQQTLEHALTINSQ 130 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 +G+ Y Q + + ++ V N Sbjct: 131 HIET---LNALGIVY--------LVQGNLEQAIATHTKAVTINPN--------------- 164 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 N++A + + Y + +Y AI Q + H A+A Y + ++ Sbjct: 165 NEIAHYNLNLA--YQRLQQYTKAIKHGQQAIKLEPHNPHPWVALAI---TYWEMGDRKKS 219 Query: 247 REVVS 251 E Sbjct: 220 HETYR 224 >gi|160875971|ref|YP_001555287.1| TPR repeat-containing protein [Shewanella baltica OS195] gi|160861493|gb|ABX50027.1| Tetratricopeptide TPR_2 repeat protein [Shewanella baltica OS195] gi|315268166|gb|ADT95019.1| von Willebrand factor type A [Shewanella baltica OS678] Length = 692 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 45/163 (27%), Gaps = 36/163 (22%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 A F ++ L+ Q + D+V Q+ A+ + Q+++ A + F Sbjct: 324 VASVGFATLIGGLLLAAAPQPAHASVWDNVWKTTDQQ-----AMQAYQSQDYANAAKQFE 378 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 QY AG Y+QA E+ + Y G + Sbjct: 379 SPQWR--------------GSAQYKAGDYEQALKTFEQ--------DSSAQGLYNQGNAL 416 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 Q+ + K Q + A + Sbjct: 417 MQLGK-----PDKAKERYQAALEKQADFP----AAKANLELAE 450 >gi|124809132|ref|XP_001348498.1| Hsp70/Hsp90 organizing protein, putative [Plasmodium falciparum 3D7] gi|75016029|sp|Q8ILC1|STI1L_PLAF7 RecName: Full=STI1-like protein gi|23497393|gb|AAN36937.1| Hsp70/Hsp90 organizing protein, putative [Plasmodium falciparum 3D7] Length = 564 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 4/61 (6%) Query: 61 YEKAVLFLKEQNFSKAYEY-FNQCSRDFPF-AGVARKSLL--MSAFVQYSAGKYQQAASL 116 Y KA + ++ +N+ KA E + F A + + L A + KY A Sbjct: 281 YNKAAVHIEMKNYDKAVETCLYAIENRYNFKAEFIQVAKLYNRLAISYINMKKYDLAIEA 340 Query: 117 G 117 Sbjct: 341 Y 341 >gi|17561782|ref|NP_508026.1| FK506-Binding protein family member (fkb-6) [Caenorhabditis elegans] gi|3876510|emb|CAB07371.1| C. elegans protein F31D4.3, confirmed by transcript evidence [Caenorhabditis elegans] Length = 431 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 51/154 (33%), Gaps = 22/154 (14%) Query: 43 SRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-SLLMS 100 + + LD+ + + +Y +K L L + +A E P +A + ++L Sbjct: 246 TAEEKLDAAKQAKDRGTMYLQKGNLKLAYNKYKRAEEVLEYEKSTDP-EKMAERETILNG 304 Query: 101 AFVQY-----SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 A++ + + ++ + P + Y + M Sbjct: 305 AYLNLSLVCSKQNEQLECIKWCDKVLETKPGNVK---ALYRKATALLTM--------NEV 353 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 + ++ +IVE + A + V RN + Sbjct: 354 RDAMKLFEKIVEVEPENK---AAAQQIIVCRNTI 384 >gi|86131260|ref|ZP_01049859.1| aerotolerance-related exported protein BatE [Dokdonia donghaensis MED134] gi|85818671|gb|EAQ39831.1| aerotolerance-related exported protein BatE [Dokdonia donghaensis MED134] Length = 254 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 7/76 (9%), Positives = 21/76 (27%), Gaps = 3/76 (3%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + +E A E + +A + + + + A + + Sbjct: 23 QTPEQYFETANAHYAEGRYQEAIDDYKKILDS---NQESAAVYYNLANAHFKLNNVAPSI 79 Query: 115 SLGEEYITQYPESKNV 130 E+ P ++ Sbjct: 80 YYYEKAKQLAPADSDI 95 >gi|332879548|ref|ZP_08447243.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682514|gb|EGJ55416.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 250 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 9/68 (13%), Positives = 18/68 (26%), Gaps = 4/68 (5%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A + + +A + ++ A Y + A E Sbjct: 27 QADSAYAAEKYEEAIPIYTALLKE---GEHA-DIYYNLGNCYYKTDRLALAILNYERAAL 82 Query: 123 QYPESKNV 130 P S +V Sbjct: 83 LDPGSSDV 90 >gi|281178140|dbj|BAI54470.1| conserved hypothetical protein [Escherichia coli SE15] Length = 807 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 76/229 (33%), Gaps = 41/229 (17%) Query: 55 RYQREVYEKAV--LFLKEQNFSKAYEYFNQCSRDFPFAGVARKS-LLMSAFVQYSAGKYQ 111 Q + Y++ ++ A Q P K+ LL A++ G+YQ Sbjct: 128 EPQNKDYQRGQILTLADAGHYDTALFKLKQLKSGAP-----DKANLLAEAYIYKLTGRYQ 182 Query: 112 QAASLGEEYI------TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 E + QYP +YV L A I D + + R+ Sbjct: 183 DELRAMTESLPENASKQQYPT----EYVLALRNNQLAAAIDDANLTPDIRADIHAELVRL 238 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKE-VEI---------GRYYLKRGEYVAAI---PR 212 T S + LA +EI +Y + +++ A+ R Sbjct: 239 SFMPTRSE-----NERYAIADRALAQYAALEILWHDNPDRTAQYQRIQVDHLGALLTRDR 293 Query: 213 FQLVLANYSDAEHAEE-----AMARLVEAYVALALMDEAREVVSLIQER 256 ++ V+++Y + + A+ + AY+ +A+ +++ + Sbjct: 294 YRDVISHYQRLKKTGQIIPPWALYWVASAYLKDQQPKKAQSIMTELFYN 342 >gi|254173324|ref|ZP_04879997.1| tetratricopeptide repeat domain protein [Thermococcus sp. AM4] gi|214032733|gb|EEB73562.1| tetratricopeptide repeat domain protein [Thermococcus sp. AM4] Length = 340 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEH-AEEAMARLVEAYVALALMDEA-REVVSL 252 EIG Y + +AI ++ V+ D A+ L +AY + ++A L Sbjct: 59 EIGHVYAHLDDVESAIELYKQVVERKKDDPEEYATALYYLADAYEHFGMPEKAIETYQKL 118 Query: 253 IQE 255 ++ Sbjct: 119 LEH 121 >gi|154495172|ref|ZP_02034177.1| hypothetical protein PARMER_04221 [Parabacteroides merdae ATCC 43184] gi|154085722|gb|EDN84767.1| hypothetical protein PARMER_04221 [Parabacteroides merdae ATCC 43184] Length = 667 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 57/196 (29%), Gaps = 48/196 (24%) Query: 67 FLKEQNFSKA-YEYF-NQCSRDFPFAGVARKSLLMSAFVQY--------SAGKYQQAASL 116 L+ N +A + + R+ A Y A A Sbjct: 500 KLQTMNTQRAQIKKLREEIHAQ-------REIQKEYAHEYYLMGNECITKAHDPNAAIRS 552 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 ++ + YP + VD + G++ M + ++ V S + Sbjct: 553 FDKALKLYP--EFVD-AWVRKGVTLLDMGDGF--------QAVTCLNEAVRLNPKSFKAR 601 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 N+ G+ YL+ Y A+ F + A E L EA Sbjct: 602 ---------YNR--------GKSYLQLKYYDEAVSDFMKAVDLKPKHAAAHE---YLAEA 641 Query: 237 YVALALMDEAREVVSL 252 ++ + + AR+ + Sbjct: 642 FLHIGEEELARQHQDI 657 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 52/164 (31%), Gaps = 29/164 (17%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDFPF--AGVARKS--LL 98 +++ Y E Y + K + + A F++ + +P RK LL Sbjct: 516 EEIHAQREIQKEYAHEYYLMGNECITKAHDPNAAIRSFDKALKLYPEFVDAWVRKGVTLL 575 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 G QA + E + P+S Y G SY Q+ + Sbjct: 576 D-------MGDGFQAVTCLNEAVRLNPKSFK---ARYNRGKSYLQL--------KYYDEA 617 Query: 159 LQYMSRIVERYTN----SPYVKGARFYVTVGRNQLAAKEVEIGR 198 + + V+ Y+ A ++ +LA + +I Sbjct: 618 VSDFMKAVDLKPKHAAAHEYLAEAFLHIGE--EELARQHQDIAD 659 >gi|126657091|ref|ZP_01728262.1| TPR repeat protein [Cyanothece sp. CCY0110] gi|126621634|gb|EAZ92344.1| TPR repeat protein [Cyanothece sp. CCY0110] Length = 279 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 65/200 (32%), Gaps = 41/200 (20%) Query: 61 YEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y K V + N+ A E F + ++ + + ++++A + Sbjct: 58 YNKGVDQIDVGNYQAAIEAFTESIKLNKSDADSYY------NRGYSYLLLEQFEEAINDY 111 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 ++ I + Y Y +Y Q+ + + ++ S+ +E + Y Sbjct: 112 DQAIEL---NAEFAYAYGNRCYAYYQL--------KNHEQAIEDCSQAIEL--EANYA-D 157 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 Y+ ++ L E AAI + +A +E+ +A AY Sbjct: 158 FYIYLGNAKDDLKMHE--------------AAILAYNQAIAL---SENNPKAYYNRALAY 200 Query: 238 VALALMDEA-REVVSLIQER 256 L +A + +Q Sbjct: 201 NRLGKSLQAVEDYTKALQLN 220 >gi|54303503|ref|YP_133496.1| hypothetical protein PBPRB1846 [Photobacterium profundum SS9] gi|46916933|emb|CAG23696.1| conserved hypothetical protein [Photobacterium profundum SS9] Length = 648 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 23/68 (33%), Gaps = 8/68 (11%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 K + K ++ KA E + KS A GK +++ ++ E + Sbjct: 370 KGIAEYKSGDYEKAIETLKPLTD--------IKSRYNLANAYAQTGKLEESEAIYESILK 421 Query: 123 QYPESKNV 130 P + Sbjct: 422 DDPNDADA 429 >gi|42521762|ref|NP_967142.1| TPR domain-containing protein [Bdellovibrio bacteriovorus HD100] gi|39574292|emb|CAE77796.1| putative TPR domain protein [Bdellovibrio bacteriovorus HD100] Length = 240 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 43/191 (22%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 +L A + G Y+ A + + + Q + V QM+ + YD+ Sbjct: 8 MLSEARGYFINGNYKMAEPILNQMLLQNTRNPEV-----------YQMLATIFYDKGQFS 56 Query: 157 LMLQYMSRIVERYT-----------------------------NSPYVKGARFYVTVGRN 187 ++ R +E S K + Sbjct: 57 KAIKTFRRALEIDPTYTDASVGLSIILNDLGKYDEGKQVFLDAQSQLEKKSGKQDPFVDE 116 Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 ++A+K E+ Y + Y A+ + +L + E R+ E +V L D A Sbjct: 117 KIASKHEELADLYYQYKRYNEAL---EQLLKAQKLSSRKAEITMRIAEVHVQLGQGDRAI 173 Query: 248 EVVSLIQERYP 258 + + + YP Sbjct: 174 KDLKSLIREYP 184 >gi|16329409|ref|NP_440137.1| mitochondrial outer membrane 72K protein [Synechocystis sp. PCC 6803] gi|1651890|dbj|BAA16817.1| mitochondrial outer membrane 72K protein [Synechocystis sp. PCC 6803] Length = 266 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 18/162 (11%), Positives = 41/162 (25%), Gaps = 42/162 (25%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 D + + Y + + A +NQ P +L + Sbjct: 64 DFTESIKLNDQDADAYYNRGYAKHVLGQYQAAITDYNQAISLNPEFAY---ALGNRCYAY 120 Query: 105 YSAGKYQQAASLGEEYITQYPESKN-------------------VDY------------V 133 + +Y +A I P + DY Sbjct: 121 FLLSQYDKAIQDCSNAIEINPNYADFYVYRGNSQSQLGNETTAIADYNDAIRINAQHANA 180 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 YY +++ ++ +D + L ++ ++ +S Sbjct: 181 YYNRALTHNRLKQD--------QQALADYNQSIQLDPDSAEA 214 >gi|34580745|ref|ZP_00142225.1| hypothetical protein [Rickettsia sibirica 246] gi|28262130|gb|EAA25634.1| unknown [Rickettsia sibirica 246] Length = 245 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 18/46 (39%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A Y K +A + +I +YP S + Y+ G + + Sbjct: 122 DLALAAYKDNKLTEAKDKFKHFIQKYPNSLLISNAYFWYGECFFKQ 167 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 14/133 (10%), Positives = 45/133 (33%), Gaps = 12/133 (9%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ- 111 D+ ++ Y+ A+ K+ ++A + F + +P + + + + Y Sbjct: 113 DIAPDKQAYDLALAAYKDNKLTEAKDKFKHFIQKYPNSLLISNAYFWYGECFFKQKDYNG 172 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + + Y P+ + +S ++ + T+ +++ + + Sbjct: 173 AAVNYLKGYKEL-PKGAKSSDGLLKLALSLGEL--------KKTQEACNMLAKFDKEFPT 223 Query: 172 SPYVKGARFYVTV 184 + A + Sbjct: 224 NR--TAASKKMAE 234 >gi|328784392|ref|XP_395911.4| PREDICTED: tetratricopeptide repeat protein 37-like [Apis mellifera] Length = 1254 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 40/120 (33%), Gaps = 34/120 (28%) Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 + + +G+ Y DQ + ++ ++ N + + Sbjct: 545 WAWLQLGLQY--------LDQGNAEQAIKAFQHVIRVDPNDSHCWESL------------ 584 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVAL--ALMDEARE 248 Y RG Y +A+ +Q VL +++ +++ A + L +EA+ Sbjct: 585 -----ADAYFIRGAYTSALKSYQRVLE------LCPKSLYPMIQLANIKLIIGQYNEAKN 633 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 36/114 (31%), Gaps = 18/114 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + +L + N +A + F R P +S A + G Y A + + Sbjct: 551 GLQYLDQGNAEQAIKAFQHVIRVDPNDSHCWES---LADAYFIRGAYTSALKSYQRVLEL 607 Query: 124 YPESKNVDYVYY-LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 P+S Y ++ ++ ++I I+ S Y+ Sbjct: 608 CPKS------LYPMIQLANIKLI------IGQYNEAKNDFEHILIY--ESRYIP 647 >gi|317178573|dbj|BAJ56361.1| hypothetical protein HPF30_0264 [Helicobacter pylori F30] Length = 331 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 61/145 (42%), Gaps = 19/145 (13%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVARK 95 R++ ++ D+ Q+E++++A+ L+++++++A E R + + A Sbjct: 189 RKTQEKAKIEFDKDLSKQKEIFQEALTLLEDKSYAEARERLLWLEANSYRLY-YVRYA-- 245 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 V Y KY++A +E ++ + + + S+ ++ D Y Sbjct: 246 ----LGEVVYGEKKYREAIKYYKESALLNKKASYMPVLLWHTAWSFKKIKDDQNY----- 296 Query: 156 KLMLQYMSRIVERYTNSPYVKGARF 180 ++++ + Y +S K A+ Sbjct: 297 ---YKFLNTLQRLYPSSEQAKMAKK 318 >gi|307261203|ref|ZP_07542878.1| hypothetical protein appser12_7670 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868934|gb|EFN00736.1| hypothetical protein appser12_7670 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 391 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 81/212 (38%), Gaps = 34/212 (16%) Query: 48 LDSVTDVRYQREVYEK---AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 LD+ D ++++ K A F+ + +A Y+ + A SL V Sbjct: 96 LDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDE---PEFAVNSLTQLMTVY 152 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 ++++A ++ E+ I ++ + +Y YAQ I++ D L +S+ Sbjct: 153 QKTKEWKKAINVAEKLIKIESDTDKIPLSHYY--CEYAQAIKNEDLDGH-----LSALSK 205 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 +E A + +G YYL + ++ +A+ ++ +L D Sbjct: 206 ALEYSPQC-----------------ARASILLGDYYLAQNQFQSALKNYERILQQDPD-- 246 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256 E + ++ Y +A D A + LI+ Sbjct: 247 FISEVIEKIKACY--MAENDLANYELFLIRAN 276 >gi|255534040|ref|YP_003094412.1| TPR repeat-containing protein [Pedobacter heparinus DSM 2366] gi|255347024|gb|ACU06350.1| TPR repeat-containing protein [Pedobacter heparinus DSM 2366] Length = 467 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 73/218 (33%), Gaps = 43/218 (19%) Query: 56 YQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + E+Y + +F + +S+A + F + FA + LL A+V + Y+ A Sbjct: 100 SEAEIYILRGNIFNSLERYSEALDNFQKALE---FAETTDEILLQIAYVYQNMLDYESAI 156 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS-- 172 ++ + Q E+K+ Y + Y + + + +++ ++ S Sbjct: 157 IYIKQSLEQNMENKDG---LYELAFCYDILDKQ--------EESIKFYQEYIDNDPYSYA 205 Query: 173 ---------------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 A Y + ++ A+ Y +G + + R+ + Sbjct: 206 AWYNLANSYHKLDLFEKAIDAYDYAILIKDNFASA-------YYNKGNALVQLDRYTEAI 258 Query: 218 ANYSDA----EHAEEAMARLVEAYVALALMDEAREVVS 251 Y + + E Y L MDEAR Sbjct: 259 EVYKQTFEYEPPNADTYCAIGECYEKLERMDEARSYYK 296 >gi|203287667|ref|YP_002222682.1| hypothetical protein BRE_208 [Borrelia recurrentis A1] gi|201084887|gb|ACH94461.1| hypothetical protein BRE_208 [Borrelia recurrentis A1] Length = 758 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 23/160 (14%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 +K +N+S+A + ++ + P + A + +A + I Sbjct: 33 GQEEIKNKNYSQAIKILSEAIQKHP---KEQDGYYFLAIAYRENNQLTEAEGALLDGIAI 89 Query: 124 YPESKNVDYVYY-LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 N+DY Y +G + + L ++Y S ++ N Sbjct: 90 ---GGNIDYKLYFELGNIMFK------RGKGYYNLAIRYYSSSIKNMPNYDKA------- 133 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 N+ A VE G+ K +Y A + + + +YS Sbjct: 134 --LLNR-ANSYVEQGKINFKEKDYKNAWDSYTMAIHDYSQ 170 >gi|218781231|ref|YP_002432549.1| transcriptional regulator, NifA subfamily, Fis Family [Desulfatibacillum alkenivorans AK-01] gi|218762615|gb|ACL05081.1| transcriptional regulator, NifA subfamily, Fis Family [Desulfatibacillum alkenivorans AK-01] Length = 1035 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 9/58 (15%), Positives = 20/58 (34%), Gaps = 4/58 (6%) Query: 70 EQNFSKAYEYFNQCSR---DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 E F++A E + + +P + + + G Y Q + + I + Sbjct: 257 EGRFTEAVESYERVVTGVEQYPRSRFPLLGAITVGYSYAQVGNYAQGIGMLDS-IRTH 313 >gi|126729321|ref|ZP_01745135.1| hypothetical protein SSE37_24014 [Sagittula stellata E-37] gi|126710311|gb|EBA09363.1| hypothetical protein SSE37_24014 [Sagittula stellata E-37] Length = 152 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 44/134 (32%), Gaps = 14/134 (10%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 S T + ++ L+ ++ A E+F + P A A + + Sbjct: 25 SKTGSPAMDLLLKRGRDALEVEDTDAALEHFRALTDHAP--DFAE-GWHGLALAFFEKER 81 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 ++ E + P+ L G++ + V ++ L + R++E Sbjct: 82 LGESMDALEHVLALNPDHFGA-----LRGVA--AIHEQVGHEV----LAYRAYERVLELR 130 Query: 170 TNSPYVKGARFYVT 183 + V+ A + Sbjct: 131 PHDEDVENALTRLE 144 >gi|307354797|ref|YP_003895848.1| TPR repeat-containing protein [Methanoplanus petrolearius DSM 11571] gi|307158030|gb|ADN37410.1| TPR repeat-containing protein [Methanoplanus petrolearius DSM 11571] Length = 253 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 30/105 (28%), Gaps = 15/105 (14%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + K L + F + + +TD Y + Y AV ++ A Sbjct: 1 MKKILLIFAVFLIAAFFTS-PACADENTSAFQITDTGYIDQ-YNNAVDLANSGDYEAA-- 56 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFV-----QYSAGKYQQAASLGE 118 ++ +A ++ + Y G + A + Sbjct: 57 -LEAINK-----SLAEEANFALGYATKSGILYVMGDFTGALEAAD 95 >gi|257464647|ref|ZP_05629018.1| hypothetical protein AM202_05319 [Actinobacillus minor 202] gi|257450307|gb|EEV24350.1| hypothetical protein AM202_05319 [Actinobacillus minor 202] Length = 351 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 8/58 (13%), Positives = 21/58 (36%), Gaps = 1/58 (1%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 E++ A ++ +A + + ++ A + + + Y GK +A Sbjct: 7 ELFSTATQLVQAGKLDEAIDIYQSIQKEDS-AEWFANAQVNLGVLFYKQGKVSEAIGA 63 >gi|238755160|ref|ZP_04616506.1| hypothetical protein yruck0001_25740 [Yersinia ruckeri ATCC 29473] gi|238706607|gb|EEP98978.1| hypothetical protein yruck0001_25740 [Yersinia ruckeri ATCC 29473] Length = 294 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 48/150 (32%), Gaps = 29/150 (19%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 + NF AYE F+ P AR L Y G++ A + + P Sbjct: 108 QAGNFDAAYEAFDSVLELDPTYNYAR---LNRGIALYYGGRFPLAQDDLQAFYQDDPNDP 164 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR----------IVERYTN--SPYVK 176 YLV + D +A ++ L+ IVE Y S Sbjct: 165 FRSLWLYLV---------EKEIDPQAAEVALKQRYEKSNRGQWGWNIVEFYLGNISEKTL 215 Query: 177 GARFYVTVGRN-QLAAK----EVEIGRYYL 201 R + N LA + +G+YYL Sbjct: 216 MERLKMDATDNTSLAEHLSETDFYLGKYYL 245 >gi|262196932|ref|YP_003268141.1| hypothetical protein Hoch_3748 [Haliangium ochraceum DSM 14365] gi|262080279|gb|ACY16248.1| hypothetical protein Hoch_3748 [Haliangium ochraceum DSM 14365] Length = 286 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 38/128 (29%), Gaps = 37/128 (28%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-----SLLMSAFVQYSAGKYQQAASL 116 +A + F +A N +P A ++ + + L+ + G A Sbjct: 28 AEAREAFRLGRFDEAIPALNYL--LYPDARLSDRGDLVEAHLLLGVAHFEVGDRADARRE 85 Query: 117 GEEYITQYPESKNVDYVYYL-------------VGMSYAQMIRDVPYD----QRATKLML 159 EE +L +++ + + V D Q + + Sbjct: 86 LEE-------------ALFLDDSVILDPLLFSEEAIAFFEERKQVFRDRAARQEEARKLA 132 Query: 160 QYMSRIVE 167 + +R+ E Sbjct: 133 EERARLRE 140 >gi|242001014|ref|XP_002435150.1| heat shock protein 70 (HSP70)-interacting protein, putative [Ixodes scapularis] gi|215498480|gb|EEC07974.1| heat shock protein 70 (HSP70)-interacting protein, putative [Ixodes scapularis] Length = 935 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 12/80 (15%) Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 + N+ AA +K Y A+ VL +A+ R Sbjct: 43 TDEENHKAVLLNNRAAAN--------IKLRRYEDAVKDATEVLEM---TPSDVKALYRRS 91 Query: 235 EAYVALALMDEA-REVVSLI 253 +AY AL ++EA R+ ++ Sbjct: 92 QAYEALGRIEEAFRDARKVL 111 >gi|209515957|ref|ZP_03264818.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. H160] gi|209503615|gb|EEA03610.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. H160] Length = 287 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 29/96 (30%), Gaps = 3/96 (3%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 + I A L G S + S + A L+ + A + + Sbjct: 10 SFAIALPFAAVLLTGCASGGSFNPRPVSSSRNTDGMSDLRVADSALRAGDVELASTLYEK 69 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 P + ++ L Y AG +A +L + Sbjct: 70 ALAANPNS---TEAQLGLGDTMYLAGDLDRARALYQ 102 >gi|257058678|ref|YP_003136566.1| MCP methyltransferase, CheR-type with Tpr repeats [Cyanothece sp. PCC 8802] gi|256588844|gb|ACU99730.1| MCP methyltransferase, CheR-type with Tpr repeats [Cyanothece sp. PCC 8802] Length = 527 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 9/74 (12%), Positives = 32/74 (43%), Gaps = 3/74 (4%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 ++ + + + + ++ E+ ++++ +S A E ++ +P + L+ Sbjct: 351 TTTEDNISQTIEELTEIDLLEEVKQLIEQKKYSFAIEKLHRILEKYPNS-FQGNYLMAEI 409 Query: 102 FVQYSAGKYQQAAS 115 + G+Y++A Sbjct: 410 YAN--LGRYEEAID 421 >gi|158299854|ref|XP_319871.4| AGAP009119-PA [Anopheles gambiae str. PEST] gi|157013718|gb|EAA14705.5| AGAP009119-PA [Anopheles gambiae str. PEST] Length = 397 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 28/100 (28%), Gaps = 14/100 (14%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVL-------FLKEQNFSKAYEYFNQCSRDFPF 89 G + V D E +++A EQ + +A + F + + P Sbjct: 84 GCVEPDTEPDQPMGVADKEPTEEEFDQANDLRAQAAAAYSEQKYDEAVKLFTEAIQLNPK 143 Query: 90 AG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127 + A++ K + P+S Sbjct: 144 SALYYAKRGQ-----AYLKLQKPNACIRDCNRALEINPDS 178 >gi|78044885|ref|YP_359093.1| TPR domain-containing protein [Carboxydothermus hydrogenoformans Z-2901] gi|77997000|gb|ABB15899.1| TPR domain protein [Carboxydothermus hydrogenoformans Z-2901] Length = 218 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 37/130 (28%), Gaps = 14/130 (10%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D +Y +L+++ + A P + + L GKY + Sbjct: 100 DKKYYPAYLNLGILYIETGKYDLAANTLKNAIALQPKSS---NAHLNLGIAYTKLGKYNE 156 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A E P S + Y +G++Y +M + +E Sbjct: 157 ALKELNEAYKLSPGSTRI---IYEIGVTYEKM--------GKIEEAKYQYKSALEFDPKF 205 Query: 173 PYVKGARFYV 182 K A + Sbjct: 206 EEAKKALERL 215 >gi|54302378|ref|YP_132371.1| hypothetical protein PBPRB0699 [Photobacterium profundum SS9] gi|46915800|emb|CAG22571.1| hypothetical protein PBPRB0699 [Photobacterium profundum SS9] Length = 391 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 24/58 (41%), Gaps = 8/58 (13%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYSAGKYQQAASLGEE 119 A L L+E ++ KA ++ A+K+ + A Y +++A ++ Sbjct: 315 AQLLLQEGHYHKALSELDRVKDK------AKKADVELAKVRAYYKLEDFERAIIHAKQ 366 >gi|298208138|ref|YP_003716317.1| hybrid sensory kinase [Croceibacter atlanticus HTCC2559] gi|83848059|gb|EAP85929.1| hybrid sensory kinase [Croceibacter atlanticus HTCC2559] Length = 730 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 15/97 (15%) Query: 61 YEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-------YSAGKYQQ 112 Y + A LF+ + +S+A +Y + F + L A+V Y G Y Sbjct: 77 YREYAQLFILQGKYSRAKDYLDLAESIFEE----EQLPLNKAYVLKEKGRIAYEEGDYIT 132 Query: 113 AASLGEEYITQYPESKNV-DYV--YYLVGMSYAQMIR 146 A + I +S + Y YL+G S+ Sbjct: 133 AIEVINLAIEDLSDSPDKYPYAQALYLIGKSHFANFN 169 >gi|119775308|ref|YP_928048.1| TPR domain-containing protein [Shewanella amazonensis SB2B] gi|119767808|gb|ABM00379.1| TPR domain protein [Shewanella amazonensis SB2B] Length = 701 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 5/53 (9%), Positives = 15/53 (28%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 R + L +Y + ++ + +A + + + P Sbjct: 378 AAHYRAGDYEAALKGFEQDSSAAGLYNQGNALMQLGRYDEAAKRYQKALEQQP 430 >gi|124266401|ref|YP_001020405.1| TPR repeat-containing protein [Methylibium petroleiphilum PM1] gi|124259176|gb|ABM94170.1| TPR repeat protein [Methylibium petroleiphilum PM1] Length = 389 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 13/97 (13%), Positives = 34/97 (35%), Gaps = 1/97 (1%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 + + S+ + +R V D + + + ++ +++ A +++ Sbjct: 160 SLLVDLGASLVALDRDAMHGEPTRLVERALALDPAHPKALAFAGLIAFDRKDYPTAVKHW 219 Query: 81 NQCSRDF-PFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +R P + A++ A + AG A S Sbjct: 220 EALARVEPPDSPFAQQIRASVAQARQLAGLPPSAESA 256 >gi|326383139|ref|ZP_08204828.1| hypothetical protein SCNU_09381 [Gordonia neofelifaecis NRRL B-59395] gi|326198275|gb|EGD55460.1| hypothetical protein SCNU_09381 [Gordonia neofelifaecis NRRL B-59395] Length = 230 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 14/102 (13%) Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV-EIGRYYLK--RGE 205 Q ++ + + + V R +L A E+ ++ Y++ G Sbjct: 42 ERTQTRLDETRARLTELPTEFPS----------VEELRAKLTADELRKVAEPYIEATTGL 91 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VALALMDEA 246 Y + R + + + EE +AR+ +AY A+ L ++A Sbjct: 92 YNSLAERGEGAVERLRQTPYVEENLARVEKAYNDAVDLTEDA 133 >gi|225850523|ref|YP_002730757.1| tetratricopeptide repeat domain protein [Persephonella marina EX-H1] gi|225644833|gb|ACO03019.1| tetratricopeptide repeat domain protein [Persephonella marina EX-H1] Length = 336 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 40/103 (38%), Gaps = 8/103 (7%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 LV + D ++D++ + V AV + ++F +A + ++ ++ Sbjct: 193 LLVLAVETGNFDEMKKYLSDLKNEETVSSIAVKLIDNEDFYRAKDILDR------YSEKE 246 Query: 94 RKSLLMSAFVQ-YS-AGKYQQAASLGEEYITQYPESKNVDYVY 134 +K + A+ Y G +A E T+ P + Y + Sbjct: 247 KKGYISYAYGYLYEANGDISRALFYYERAFTKNPSDPYIAYAF 289 >gi|224588324|gb|ACN58948.1| hypothetical protein AKSOIL_0107 [uncultured bacterium BLR7] Length = 428 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 46/181 (25%), Gaps = 39/181 (21%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 + A+ FL G S + T Y+ +E +++A + F++ Sbjct: 80 LALIAGAMLFLQGAADPPSPSSVAAAPITANTEAAAAYQDCERLFREGKYAEAVQAFSRA 139 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE------------SKNVD 131 P ++ + S Y +A + I P S D Sbjct: 140 VERDPN---MAQAYAFRGYTHNSLNDYDRAIADFARAIAIDPNDATSFSDRGMVFSNKKD 196 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKL----------------MLQYMSRIVERYTNSPYV 175 Y ++ + D + T L + N Y Sbjct: 197 YA---RAIADYDQA--IKLDPKLTYAFNGRGTVYNALGDDDRALADYDEAIRLDPN--YA 249 Query: 176 K 176 + Sbjct: 250 E 250 >gi|197335049|ref|YP_002156578.1| tetratricopeptide repeat family protein [Vibrio fischeri MJ11] gi|197316539|gb|ACH65986.1| tetratricopeptide repeat family protein [Vibrio fischeri MJ11] Length = 389 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 55/178 (30%), Gaps = 28/178 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A ++ +A + F Q + +LL + +++QA + Sbjct: 114 AKDYMVSGILDRAEKIFEQLLEE---PDHREAALLQLVAIHQQTREWEQAIQFANSLVRM 170 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 + +D +Y +L +Q ++ NS K Sbjct: 171 GRKKLKLDIAHY------------------YCELAMQELAD-----ENSNKAKQNLKKAL 207 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 NQ + + + ++ Y A+ + VL D + EA+ L E Y L Sbjct: 208 SSDNQCVRASIMMAKLLMEEDNYKGALVHLESVLD--QDIDFVSEALPLLAECYEKLD 263 >gi|257058461|ref|YP_003136349.1| peptidase M48 Ste24p [Cyanothece sp. PCC 8802] gi|256588627|gb|ACU99513.1| peptidase M48 Ste24p [Cyanothece sp. PCC 8802] Length = 669 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 9/77 (11%) Query: 62 EKAVLFLKEQNFSKAYEYFNQC-----SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 + LK Q + +A + R PF ++ + A G+ ++ +L Sbjct: 4 NDGLKALKNQQYPEAVQLLEAYCQNNSDRQSPF--Y-IQAQIALARAYRGNGELNKSLAL 60 Query: 117 GEEYITQYPESKNVDYV 133 +E +TQ ++ + Sbjct: 61 CQE-LTQNSNNEARQWA 76 >gi|196010431|ref|XP_002115080.1| hypothetical protein TRIADDRAFT_58866 [Trichoplax adhaerens] gi|190582463|gb|EDV22536.1| hypothetical protein TRIADDRAFT_58866 [Trichoplax adhaerens] Length = 1307 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 24/124 (19%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAG 108 Y ++ + + +A F + R+ P KS A Sbjct: 685 ASSYYNIGIINKMQDKYEEAISMFEKALKIQLSALGRNHP---ETAKSYFYVAEAYSKLN 741 Query: 109 KYQQAASLGEEYIT-----QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 KY++A + ++ + P NV VY I + DQ K L + Sbjct: 742 KYEEAMLMFKKSLEIQVSVLGPNHPNVSAVY--------DRIASIYDDQGNYKEALSSYN 793 Query: 164 RIVE 167 + +E Sbjct: 794 KALE 797 >gi|86158080|ref|YP_464865.1| hypothetical protein Adeh_1655 [Anaeromyxobacter dehalogenans 2CP-C] gi|85774591|gb|ABC81428.1| hypothetical protein Adeh_1655 [Anaeromyxobacter dehalogenans 2CP-C] Length = 243 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 15/42 (35%) Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + G A + L QY G++ A + E Y+ Sbjct: 107 EKVIATHGGTGAALVAELARGDAQYKLGEWDAALASYERYLK 148 >gi|108762237|ref|YP_633061.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622] gi|14517942|gb|AAK64445.1|AF377339_6 serine/threonine kinase associate protein KapB [Myxococcus xanthus] gi|108466117|gb|ABF91302.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622] Length = 271 Score = 37.0 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 3/71 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E A L + E ++ A + R P ++ L G Y +A E Sbjct: 151 ELAALMMDEGDYRSAITQLKEVVRLEPDNF---EAQLDLGICFAQKGFYAEAERAYERAR 207 Query: 122 TQYPESKNVDY 132 PE ++Y Sbjct: 208 ALNPEDLLLNY 218 >gi|332664651|ref|YP_004447439.1| hypothetical protein Halhy_2698 [Haliscomenobacter hydrossis DSM 1100] gi|332333465|gb|AEE50566.1| Tetratricopeptide TPR_1 repeat-containing protein [Haliscomenobacter hydrossis DSM 1100] Length = 243 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 6/88 (6%), Positives = 26/88 (29%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 S Y ++ + Y +++ + +A + ++ + Sbjct: 46 DSESNYRKALERKNSPKGQYNLGNAIYQQKRYQEAITRYENAAKKATTPSDKAAAYHNLG 105 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKN 129 + +++ + ++ + P K Sbjct: 106 NTHFQLNDLEKSVASYKQALRLNPADKE 133 >gi|302770493|ref|XP_002968665.1| hypothetical protein SELMODRAFT_440495 [Selaginella moellendorffii] gi|300163170|gb|EFJ29781.1| hypothetical protein SELMODRAFT_440495 [Selaginella moellendorffii] Length = 824 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 3/62 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +Y L F +A E +++ P + ++ L A AG ++A Sbjct: 432 DALYNLGGLLRDTGRFQRAAEVYSRVLSLNP-SHW--QAQLNRAVSLLGAGDTEEARKAL 488 Query: 118 EE 119 +E Sbjct: 489 KE 490 >gi|262158968|ref|ZP_06030080.1| GGDEF family protein [Vibrio cholerae INDRE 91/1] gi|262169327|ref|ZP_06037019.1| GGDEF family protein [Vibrio cholerae RC27] gi|262022140|gb|EEY40849.1| GGDEF family protein [Vibrio cholerae RC27] gi|262029153|gb|EEY47805.1| GGDEF family protein [Vibrio cholerae INDRE 91/1] Length = 578 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100 D+ L + D +Y L + + A +Y N+ + + Sbjct: 126 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 185 Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + G+Y+++ E+ + P + + YV+ +G +Y ++ V DQ Sbjct: 186 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 243 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L+Y++ + + LA + K +Y AI Sbjct: 244 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 285 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A S++ +AY+ LA + EA + Sbjct: 286 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 313 >gi|256839603|ref|ZP_05545112.1| TPR repeat-containing protein [Parabacteroides sp. D13] gi|256738533|gb|EEU51858.1| TPR repeat-containing protein [Parabacteroides sp. D13] Length = 707 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 73/223 (32%), Gaps = 48/223 (21%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCS 84 + ++AV F+ + + + D +T Y + ++L++ + KA +N+ Sbjct: 127 MLVNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAI 186 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VYYLV- 137 P+ A + A + Y Y+ A + E + +++ Y V Y + Sbjct: 187 EMDPY--YAP-AYGNRAILHYQMDDYKDALADLNEALRL--DTRESGYYINRGLVRYQMN 241 Query: 138 ----GMSYAQMIRDVPYDQRATK--------------LMLQYMSRIVERYTNSPYVKGAR 179 M+ + + + ++ ++++ ++ Sbjct: 242 DLRGAMADYDQVISMDRRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQQEPDN------- 294 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 Y+ L E G+Y A+ + +VL Y Sbjct: 295 -YMAYYNRALLRFE---------TGDYRGAVQDYDVVLKQYPT 327 >gi|152990369|ref|YP_001356091.1| hypothetical protein NIS_0620 [Nitratiruptor sp. SB155-2] gi|151422230|dbj|BAF69734.1| hypothetical protein [Nitratiruptor sp. SB155-2] Length = 660 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 52/141 (36%), Gaps = 13/141 (9%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV---ARKSLLMSAFVQ 104 ++ +T + + + + + + + N+ A + + + A Sbjct: 188 VEKLTKEQKKEYRFIRGLSYFYQGNYENAIRLL--LQTYKEYEEYLIDNPQFYYIVAENA 245 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y G+Y+ A L + I +Y ++++V + + D+ ++ + Y R Sbjct: 246 YRYGEYKTAKQLFKR-ILKYVKNRDV----LQKTL---LRLGDIAFNSNNIHESIGYYYR 297 Query: 165 IVERYTNSPYVKGARFYVTVG 185 ++ ++ S Y A+ + Sbjct: 298 LIRKFPKSKYATIAKLKLLYI 318 Score = 35.5 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 8/52 (15%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 A ++ +G YY A+ F V A + D + +A+ +L + Y+A+ Sbjct: 52 ALRDFRVGSYYD-------ALNEFSYV-AKFPDTPYFLDALYQLAKTYLAIG 95 >gi|55379675|ref|YP_137525.1| TPR repeat-containing protein [Haloarcula marismortui ATCC 43049] gi|55232400|gb|AAV47819.1| tetratricopeptide repeat protein [Haloarcula marismortui ATCC 43049] Length = 242 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 2/57 (3%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 A L+E + A + + + A + A+ + +G+ +QA E Sbjct: 106 AAHAELEE--WDAAIGAYKEALNFDEESDHAATAETNLAYALWKSGRSEQALEHAER 160 >gi|300870878|ref|YP_003785749.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] gi|300688577|gb|ADK31248.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] Length = 233 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 63/180 (35%), Gaps = 42/180 (23%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQ---CSRDFP---FAGVARKSLLMSAFVQYSAGKYQQA 113 ++KA +F E + +A Y+N+ ++ + + K+ L G+Y++A Sbjct: 16 YFDKANIFSLEGKYEEAIVYYNKSIELDNNYSVAYYNRGSVKADL---------GEYEEA 66 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + I N Y Y G++ + + ++ + +E +S Sbjct: 67 IKDYDMAIEL---DHNYTYAYNNRGLAKDYL--------GEYEEAIKDYDKAIEL--DSD 113 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRY-------------YLKRGEYVAAIPRFQLVLANY 220 Y A + +N L E + + Y RG + +++ + +Y Sbjct: 114 YS-DAYNNRGIVKNILGKYEEAVKDFNKVIELNPNDSDAYYNRGTVKDVLGQYEEAIKDY 172 >gi|209527043|ref|ZP_03275559.1| sulfotransferase [Arthrospira maxima CS-328] gi|209492554|gb|EDZ92893.1| sulfotransferase [Arthrospira maxima CS-328] Length = 514 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 39/116 (33%), Gaps = 14/116 (12%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 E+ +A + +A ++Q P A G +A + Sbjct: 2 SAGELLRQANQLKRSGKLDEAIALYHQVIDINPHFAWAYHG---LGDAWAKQGNLDEAVA 58 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 E + +P+S ++YY +G A++ + + Y+ + ++ + Sbjct: 59 WYSECLKIHPDS---AWLYYSLGEVLAEL--------GDLEAAVDYLQKAIDIKPD 103 >gi|194335812|ref|YP_002017606.1| Tetratricopeptide TPR_2 repeat protein [Pelodictyon phaeoclathratiforme BU-1] gi|194308289|gb|ACF42989.1| Tetratricopeptide TPR_2 repeat protein [Pelodictyon phaeoclathratiforme BU-1] Length = 577 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 83/257 (32%), Gaps = 55/257 (21%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 L+ A++ + C S DSV + + + A L + ++ +A E Sbjct: 22 LHMAAISSVLLFSGCASSKPVLSGS--TVPDSVVEASKRE--FVAASLKSAKGDYREAVE 77 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + + D P + A L A+V + G A E+ + P +K Y +L Sbjct: 78 RYRKLLHDQP-SNAAIHYALSKAWV--ALGVPDSARLYSEKSVLLNPRNKY--YTAFLAF 132 Query: 139 MSYAQMIRDVPY-----------DQRATK----------------LMLQYMSRIVERYTN 171 +S+ + D D +T+ L I+ R Sbjct: 133 LSH--QMHDYGRAAELYRQLAVLDPGSTEPLTSLALEYLAVDQPEKSLAVFQEILARDPK 190 Query: 172 SPYV--------------KGARFYVTVGRNQLAAKE---VEIGRYYLKRGEYVAAIPRFQ 214 + + A V Q +KE + +G YL+ +Y A F+ Sbjct: 191 NEDALVQMLFVEIKLTHYQEAIATVKELIGQSDSKEKLHLTLGELYLQTRQYGLASRTFR 250 Query: 215 LVLANYSDAEHAEEAMA 231 +L + + A A+ Sbjct: 251 ELLKSNPGSVSAWLALF 267 >gi|183222020|ref|YP_001840016.1| hypothetical protein LEPBI_I2662 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912087|ref|YP_001963642.1| hypothetical protein LBF_2580 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776763|gb|ABZ95064.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780442|gb|ABZ98740.1| Hypothetical protein; putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 314 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 39/107 (36%), Gaps = 17/107 (15%) Query: 136 LVGMSYAQMIRDVPY--DQRATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQLAAK 192 L S ++ R + + + + + ++V + P A + + V Sbjct: 175 LKIKSQFELARSLDRIGNPESEEKAYKEYLKLVTEFPKHPELTPRANYAMAVLL------ 228 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 +++ EY +A + V+ N+ ++E A L + Y + Sbjct: 229 --------IRKKEYRSAAHQLVQVIKNFKESEEFLPAHYYLGKIYES 267 >gi|134045715|ref|YP_001097201.1| hypothetical protein MmarC5_0675 [Methanococcus maripaludis C5] gi|132663340|gb|ABO34986.1| TPR repeat-containing protein [Methanococcus maripaludis C5] Length = 344 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 48/144 (33%), Gaps = 42/144 (29%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--------------RKSL------LMS- 100 + + +L NF K+ E F++ R P+ A +++ L Sbjct: 57 DSGLDYLGNGNFEKSIESFDETLRINPYHVEALVSKGYILYAINRSEEAIECYDKALEIN 116 Query: 101 ----------AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 + + +Y +A ++ + Y E+ VYY+ G S + R Sbjct: 117 SDYYDVWQYKGYALHDLERYDEAIECFDKSLEIYDENPE---VYYMKGASLYGLER---- 169 Query: 151 DQRATKLMLQYMSRIVERYTNSPY 174 L+ + +E Y N Y Sbjct: 170 ----YDEALECLDIALETYPNDIY 189 >gi|82776644|ref|YP_402993.1| tetratricopeptide repeat protein [Shigella dysenteriae Sd197] gi|309789047|ref|ZP_07683642.1| tetratricopeptide repeat family protein [Shigella dysenteriae 1617] gi|81240792|gb|ABB61502.1| putative heat shock protein [Shigella dysenteriae Sd197] gi|308923318|gb|EFP68830.1| tetratricopeptide repeat family protein [Shigella dysenteriae 1617] Length = 389 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 61/187 (32%), Gaps = 38/187 (20%) Query: 64 AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + +A + FNQ DF + + + A ++Q+A + E + Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQA-----TSEWQKAIDVAERLV 168 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR-- 179 D++ ++ + + ++ S + A Sbjct: 169 KL-------------------------GKDKQRVEIA-HFYCELALQHMASDDLDRAMTL 202 Query: 180 -FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 N A + +GR ++ +GEY A+ Q V++ D E E + L Y Sbjct: 203 LKKGAAADNNSARVSIMMGRVFMAKGEYAKAVESLQRVIS--QDRELVSETLEMLQTCYQ 260 Query: 239 ALALMDE 245 L E Sbjct: 261 QLGKTAE 267 >gi|78186368|ref|YP_374411.1| TPR repeat-containing protein [Chlorobium luteolum DSM 273] gi|78166270|gb|ABB23368.1| TPR repeat [Chlorobium luteolum DSM 273] Length = 230 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 18/155 (11%), Positives = 44/155 (28%), Gaps = 51/155 (32%) Query: 68 LKEQNFSKAYEYFNQ------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA------- 114 +F +A + + + + + L+ A Y+ GK + A Sbjct: 71 FDRGDFQRAIDGTEKEPGLKTIAEQYNGTPSGEMAELLLANAYYAIGKPKDALKAFDAAS 130 Query: 115 -------------------------SLGEEYITQYPESKNVD----YVYYLVGMSYAQMI 145 + + +++ S+ + YL+ + Sbjct: 131 PVSPDLAAAAIAGKASCQSDLQQYDAAAKSFLS---ASEKAENNALKAQYLMAAA----- 182 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 D T+ + ++V+RY S + A+ Sbjct: 183 -DCRLGAGDTEKAGELFGQVVDRYPGSSGARAAQQ 216 >gi|116626285|ref|YP_828441.1| hypothetical protein Acid_7245 [Candidatus Solibacter usitatus Ellin6076] gi|116229447|gb|ABJ88156.1| hypothetical protein Acid_7245 [Candidatus Solibacter usitatus Ellin6076] Length = 554 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 21/58 (36%), Gaps = 2/58 (3%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +Y L + + +A YF++ + A +L A+ GK + + Sbjct: 187 LYSSGQSALDNRQWDQALGYFSEVVTRN--SPRADGALYWKAYALGKLGKRDEGLAAI 242 >gi|312373067|gb|EFR20893.1| hypothetical protein AND_18345 [Anopheles darlingi] Length = 501 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 1/66 (1%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 KA ++ + +++A + + L++ Y G+Y+ A + + Sbjct: 204 KAHANIQARKYTEAIQTLRSIEATTALRNY-HQLLVLIGECYYHNGEYENAYNALKRAHG 262 Query: 123 QYPESK 128 P+S+ Sbjct: 263 MNPQSR 268 >gi|308235972|ref|NP_001184114.1| lysine-specific demethylase 6A isoform 1 [Canis lupus familiaris] Length = 1419 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFHWAIKAF 153 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198 ++ + K + + QL A + I Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234 >gi|308235931|ref|NP_001184115.1| lysine-specific demethylase 6A isoform 2 [Canis lupus familiaris] Length = 1367 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFHWAIKAF 153 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198 ++ + K + + QL A + I Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234 >gi|46519057|gb|AAS99868.1| ubiquitously transcribed X chromosome tetratricopeptide repeat protein variant 2 [Canis lupus familiaris] Length = 1367 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFHWAIKAF 153 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198 ++ + K + + QL A + I Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDSNPCTLSNAEIQFHIAH 213 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234 >gi|46519055|gb|AAS99867.1| ubiquitously transcribed X chromosome tetratricopeptide repeat protein variant 1 [Canis lupus familiaris] Length = 1419 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFHWAIKAF 153 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QL------------AAKEVEIGR 198 ++ + K + + QL A + I Sbjct: 154 QEVLYVDPSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234 >gi|304382434|ref|ZP_07364933.1| hypothetical protein HMPREF0658_0387 [Prevotella marshii DSM 16973] gi|304336442|gb|EFM02679.1| hypothetical protein HMPREF0658_0387 [Prevotella marshii DSM 16973] Length = 374 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 15/141 (10%), Positives = 39/141 (27%), Gaps = 26/141 (18%) Query: 61 YEKAVLFLKEQNFSKAYEY-----FNQCSRDFPFAGVARKSLLMSAFVQY---SAGKYQ- 111 Y A + +++ A + A + + S G + Sbjct: 110 YNGAQHDKEFEDYEYAMRSTDPMVLQSYLDRY---KDAPTAHIDSIQAHLALIKLGDQEW 166 Query: 112 ------QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + + Y+ + PES + I + +D K + + Sbjct: 167 TDAVISNSKEALQAYLAKNPESPHKAEAL--------DKIDAIDWDIAGKKNTKEGYHQY 218 Query: 166 VERYTNSPYVKGARFYVTVGR 186 + + + +V A+ + + Sbjct: 219 ITDHPDGKFVVEAQAALDKVK 239 >gi|262193701|ref|YP_003264910.1| lytic transglycosylase catalytic [Haliangium ochraceum DSM 14365] gi|262077048|gb|ACY13017.1| Lytic transglycosylase catalytic [Haliangium ochraceum DSM 14365] Length = 730 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 32/70 (45%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 R ++ A + +A +++ + + ++P A ++ ++ ++ ++ G Y A Sbjct: 273 RAAMAMFHGARALSRADRDREAIDWYQRVAAEYPRTIWAAEAQFLAGWLAFNLGDYDAAI 332 Query: 115 SLGEEYITQY 124 L E + +Y Sbjct: 333 PLLERTLDRY 342 >gi|167648281|ref|YP_001685944.1| tetratricopeptide TPR_4 [Caulobacter sp. K31] gi|167350711|gb|ABZ73446.1| Tetratricopeptide TPR_4 [Caulobacter sp. K31] Length = 520 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 47/156 (30%), Gaps = 16/156 (10%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + L +A + + + S D + +A Q++ A + Sbjct: 1 MRSLVLATALLVATLSAPAGVQARGLPLSVTSPVDQDTMSAL-AEAQADFAAQDYVSASK 59 Query: 79 YFNQCSRDFPFAGVARKSL----LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 ++ +R F + LM A + A + ++ PE+ D+ Sbjct: 60 VLDRLTRSARFKDNSSAVQRAVWLMLASSASQTQDWPAARAAIDQATAL-PEANEDDW-- 116 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 ++ D+ T L ++ I R+ Sbjct: 117 ----LARY----DIARGGGDTAETLHSLAVIARRFP 144 >gi|88603649|ref|YP_503827.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] gi|88189111|gb|ABD42108.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] Length = 436 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 61/199 (30%), Gaps = 40/199 (20%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + ++ +K + A ++F +C + P + L+ ++ +A Sbjct: 190 QDPDLLFSMGRALMKIGGYHSAIQFFKKCLKIRP--DYTA-AWLLLGNSYKVLNQFDEAI 246 Query: 115 SLGEEYITQYPES----KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 EE + P S K + VY ++G ++ Y + + ++Y + + Sbjct: 247 DAYEEAMELDPGSTKYRKYIADVYLVMG-------KEALYKEGKPQEAIEYFDKTIR--- 296 Query: 171 NSPYVKGARFYVTVGRNQLAAKE---VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 +A G Y K G Y A F V+ HA Sbjct: 297 -----------------MIANHITAWFSKGVAYKKLGAYRNATACFLKVVEMDPQNGHAY 339 Query: 228 EAMARLVEAYVALALMDEA 246 + + +EA Sbjct: 340 ---YEMAQILEKTGNNEEA 355 >gi|118349830|ref|XP_001008196.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89289963|gb|EAR87951.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 260 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 12/113 (10%) Query: 62 EKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 E+A + K +S A +++ D A K + A + + QA E Sbjct: 40 EQADKYFKLHQYSNAVDFYKEALKYDDHTKSQADKIIKNMALAYFQMNQIDQAIQCYMEL 99 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 +YP +N+ VG+ Y + ++ + L+ ++E+ N+ Sbjct: 100 QEKYPNDQNIQIA---VGLIYGKS--------QSPEKALKVFEEVLEKDPNNR 141 >gi|89899174|ref|YP_521645.1| hypothetical protein Rfer_0360 [Rhodoferax ferrireducens T118] gi|89343911|gb|ABD68114.1| Tetratricopeptide TPR_2 [Rhodoferax ferrireducens T118] Length = 160 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 41/121 (33%), Gaps = 6/121 (4%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + +L V S + T Q +E V ++ ++F +A Sbjct: 1 MKNESLWTVVLATVLAPAVMAAGSPSTSSRPAPTRQAAQPSDFELGVKAVQARDFERALP 60 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK-NVDYV--YY 135 F + +R P A F Q + Q+ + ++ + P + ++Y+ Y Sbjct: 61 LFEKVTRAEPRNADAWNY---LGFSQRQLRHFDQSLAAYQKALALNPNHRGAIEYLGELY 117 Query: 136 L 136 L Sbjct: 118 L 118 >gi|29347085|ref|NP_810588.1| hypothetical protein BT_1675 [Bacteroides thetaiotaomicron VPI-5482] gi|29338983|gb|AAO76782.1| conserved protein, with a conserved TPR domain [Bacteroides thetaiotaomicron VPI-5482] Length = 734 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 40/107 (37%), Gaps = 17/107 (15%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSR----DFPFAGVARKSLLMSAFVQYSAGKYQ 111 + ++ A +LK++ +++A E + + A +K + + KY Sbjct: 497 SEDILFPIADFYLKKERWNEAIEVYEEMETIGALQERGAEYYQK----LGYALQKSKKYA 552 Query: 112 QAASLGEEYITQYP----ESKNVDYVY-----YLVGMSYAQMIRDVP 149 +A + T P ++++ Y Y +SY + + + Sbjct: 553 EAIGAYLKADTLKPDNIWNNRHLAICYRLNRNYQAALSYYKKVEEAT 599 >gi|310820331|ref|YP_003952689.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309393403|gb|ADO70862.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 350 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 39/112 (34%), Gaps = 18/112 (16%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 K ++ L+ +A ++F + R F ++ F+ G Y +A + + Sbjct: 67 NKGLISLQAGKKEEAKKHFIKALR---FNQEQAQAYQNLGFIYLEEGAYGKAHDNFQRAL 123 Query: 122 TQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 P DY Y +G++ +M + + + I+ N Sbjct: 124 KVNP-----DYLEARYNLGLTLMKMEKG--------EEAKKEFRTILAVNPN 162 >gi|299132070|ref|ZP_07025265.1| TPR repeat-containing protein [Afipia sp. 1NLS2] gi|298592207|gb|EFI52407.1| TPR repeat-containing protein [Afipia sp. 1NLS2] Length = 210 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 7/70 (10%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117 + +A + L+ A + + + P + R++ L Y Y +A Sbjct: 93 LMARASIALENNESDVALKLLDAIIKLRPDYTEAWNRRATL-----YYKKNDYNRAMEDI 147 Query: 118 EEYITQYPES 127 EE + + P Sbjct: 148 EEVLRREPRH 157 >gi|281202386|gb|EFA76591.1| tetratricopeptide-like helical domain-containing protein [Polysphondylium pallidum PN500] Length = 352 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 45/139 (32%), Gaps = 22/139 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKS 96 + + SV ++ + L +++ A E + + + P A +S Sbjct: 131 MSAKLKFFEIKSVEIKAAAEKLKVEGNSKLSGHDYNGAVECYTKAIQYDPTNAIYFANRS 190 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRA 154 SAF +Y++A I + P Y Y+ +G + + Sbjct: 191 ---SAFSNLK--QYEKAVEDANTAIERNPS-----YGKAYFRLGSANMSL--------GK 232 Query: 155 TKLMLQYMSRIVERYTNSP 173 + + + +E N+ Sbjct: 233 IQEAVDAYKKAIELEPNNE 251 >gi|224128732|ref|XP_002320408.1| predicted protein [Populus trichocarpa] gi|222861181|gb|EEE98723.1| predicted protein [Populus trichocarpa] Length = 488 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 40/138 (28%), Gaps = 22/138 (15%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARKSLLMSAFVQYSA 107 ++V E+ A K + +A + + + + A ++ F Sbjct: 9 SNVSRAEEIKVLANEAFKAHKYGQAIDLYSQAIELNGDNAVY--WANRA-----FAHSKL 61 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y A + P+ ++ G +Y M K L+ ++ + Sbjct: 62 EEYGSAIQDASKATEIDPKYSKAKHICLERGAAYLAM--------GKFKDALKDFQQVKK 113 Query: 168 RYTNSPYVKGARFYVTVG 185 N P A + Sbjct: 114 ICPNDP---DASKKLKEC 128 >gi|254427208|ref|ZP_05040915.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881] gi|196193377|gb|EDX88336.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881] Length = 633 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 40/112 (35%), Gaps = 9/112 (8%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + LK+ N A Q D PF+ +LL Y AG ++A L E + Sbjct: 232 ASGLTELKDGNLENARADLRQVRSDGPFS---EDALLALGLANYRAGDVKRALPLWLEAV 288 Query: 122 TQYPESKNVDYVYYLVGMSYAQM------IRDVPYDQRATKLMLQYMSRIVE 167 + +V L +Y ++ + Y + L+ + R ++ Sbjct: 289 RRNSSHPSVQEALMLAPRAYEELGGLPQALSGYQYAATQYREALKDIQRAID 340 >gi|163786251|ref|ZP_02180699.1| hypothetical protein FBALC1_13737 [Flavobacteriales bacterium ALC-1] gi|159878111|gb|EDP72167.1| hypothetical protein FBALC1_13737 [Flavobacteriales bacterium ALC-1] Length = 885 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 33/81 (40%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + S ++ L + D Y +Y +LK+++F A +F +C V+ ++L Sbjct: 77 SKMSYKNKELINEVDKEYVGAIYRVGYFYLKKRDFKSAILFFEKCIEIDINKRVSGQALC 136 Query: 99 MSAFVQYSAGKYQQAASLGEE 119 + Y ++ + + Sbjct: 137 EIGKCYFELNDYYRSINYYKR 157 >gi|147920898|ref|YP_685295.1| O-linked GlcNAc transferase [uncultured methanogenic archaeon RC-I] gi|110620691|emb|CAJ35969.1| predicted O-linked GlcNAc transferase [uncultured methanogenic archaeon RC-I] Length = 368 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 39/109 (35%), Gaps = 14/109 (12%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 K L L + + +A F + + P ++ + L + Q + ++A + I Sbjct: 227 KGRLMLLSEKYEEAAGAFRKAAEIAP--DLS-DAWLYQGWAQEMQERAEEAIEAYSKAIE 283 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 P + +Y+ G+ +M + ++ +E Y + Sbjct: 284 LNPGNH---MAWYMKGVLLGRMEK--------YDAAVECFDAAIEIYPD 321 >gi|59712363|ref|YP_205139.1| hypothetical protein VF_1756 [Vibrio fischeri ES114] gi|59480464|gb|AAW86251.1| conserved protein [Vibrio fischeri ES114] Length = 389 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 57/179 (31%), Gaps = 30/179 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A ++ +A + F Q + +LL + +++QA + Sbjct: 114 AKDYMVSGILDRAEKIFEQLLEE---PDHREAALLQLVAIHQQTREWEQAIQFANSLVRM 170 Query: 124 YPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + +D +Y ++ ++ ++ ++ K L ++ V A + Sbjct: 171 GRKKLKLDIAHYYCELAMQELADENLNKAKQNLKKALSSDNQCVR----------ASIMM 220 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 ++ Y +A+ + VL D + EA+ L E Y L Sbjct: 221 AKLL--------------MEEENYKSALAHLESVLD--QDIDFVSEALPLLAECYEKLD 263 >gi|304411848|ref|ZP_07393459.1| Tetratricopeptide TPR_1 repeat-containing protein [Shewanella baltica OS183] gi|307303384|ref|ZP_07583139.1| TPR repeat-containing protein [Shewanella baltica BA175] gi|304349708|gb|EFM14115.1| Tetratricopeptide TPR_1 repeat-containing protein [Shewanella baltica OS183] gi|306913744|gb|EFN44166.1| TPR repeat-containing protein [Shewanella baltica BA175] Length = 694 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 34/100 (34%), Gaps = 19/100 (19%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTD--VRYQREVYEKAVLFLKEQNFSKAYEY 79 A F ++ L+ Q + D+ D + + +A+ + Q+++ A + Sbjct: 324 VASVGFATLIGGLLLAAAPQPAHANVWDNAWDNVWKTPDQ---QAMQAYQSQDYANAAKQ 380 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 F QY AG Y+QA E+ Sbjct: 381 FESPQWR--------------GSAQYKAGDYEQALKTFEQ 406 Score = 35.5 bits (81), Expect = 8.5, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 22/65 (33%), Gaps = 7/65 (10%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRD--FPFAGVARKS 96 + + L + + +Y + ++ KA E + + FP A K+ Sbjct: 393 KAGDYEQALKTFEQDSSAQGLYNQGNALMQLGKPDKAKERYQAALEKQADFP----AAKA 448 Query: 97 LLMSA 101 L A Sbjct: 449 NLELA 453 >gi|217967766|ref|YP_002353272.1| TPR repeat-containing protein [Dictyoglomus turgidum DSM 6724] gi|217336865|gb|ACK42658.1| TPR repeat-containing protein [Dictyoglomus turgidum DSM 6724] Length = 870 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 51/135 (37%), Gaps = 26/135 (19%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + G +++A + E ++ P KN+ + +G+ ++ +Y+ Sbjct: 666 YFQEGDFEKAKEIYERLLSINPNDKNI---LFNLGLVMYRL--------GDLNKAEEYLL 714 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAA----KEVEI-GRYYLKRG-------EYVAAIP 211 + + Y A + V QL KE++I R Y++RG +Y +A Sbjct: 715 KSLNIDPT--YSN-ALELLRVIYKQLGKEDKLKEIKIDERVYIQRGLEAYKNKDYNSAFD 771 Query: 212 RFQLVLANYSDAEHA 226 F+ L ++ Sbjct: 772 YFKKALELKPNSPEI 786 >gi|170077429|ref|YP_001734067.1| serine/threonine kinase [Synechococcus sp. PCC 7002] gi|169885098|gb|ACA98811.1| serine/threonine kinase [Synechococcus sp. PCC 7002] Length = 714 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 40/110 (36%), Gaps = 14/110 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 KA + L+ + A R + ++ ++ +Y +A + ++ + Sbjct: 437 TKARIHLRREETDAALNSLGALLRLDSQQVW---AWFEKGWIHHNRAEYNEAIAAYQQAL 493 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 ++ N+ +Y G SY+++ R + R+VE + Sbjct: 494 KLDDQNANI---WYQQGNSYSKLQR--------YREAKNAYVRVVELEPD 532 >gi|81097720|gb|AAI09401.1| Zgc:123010 [Danio rerio] Length = 343 Score = 37.0 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 46/148 (31%), Gaps = 29/148 (19%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQC-----SRDFPFAGVARKSLL 98 +V S + + EK + F++E +++A F F F Sbjct: 172 EVIGFSEAKTKRSASLVEKGIRFVQEGQYTQAVSLFTEAIKCDPKDYRF-FG-------- 222 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 ++ +Y A + E+ I P+ YY G + + R Sbjct: 223 NRSYCYCCLEQYALALADAEKSIQMAPDWPKG---YYRRGSALMGLKRYS--------EA 271 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGR 186 + M ++++ + A + + Sbjct: 272 EKAMEQVLKLDGDCE---EAVNDLLYCK 296 >gi|307132466|ref|YP_003884482.1| TPR repeat protein [Dickeya dadantii 3937] gi|306529995|gb|ADM99925.1| TPR repeat protein [Dickeya dadantii 3937] Length = 642 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 16/135 (11%), Positives = 54/135 (40%), Gaps = 8/135 (5%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA------GVARKSL 97 ++ V+ R+++ + V ++ +A + +NQ +F + + K++ Sbjct: 228 QEDKGPHAPSVKKARDLFNQGVSLGQQGKSDQAIQIYNQLITEFQDSDDPILQELVAKAM 287 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 F G+ A + IT++ ++ + + + + ++ Q + Sbjct: 288 GNKGFRLGKKGELSDAIQTYDRLITRF-KNSDSPVILQWIATAMLNKAINIGQ-QGQSDE 345 Query: 158 MLQYMSRIVERYTNS 172 +Q ++++++ +S Sbjct: 346 EIQAYDQLIDKFKDS 360 >gi|255745754|ref|ZP_05419702.1| GGDEF family protein [Vibrio cholera CIRS 101] gi|255736829|gb|EET92226.1| GGDEF family protein [Vibrio cholera CIRS 101] Length = 648 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100 D+ L + D +Y L + + A +Y N+ + + Sbjct: 196 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 255 Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + G+Y+++ E+ + P + + YV+ +G +Y ++ V DQ Sbjct: 256 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 313 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L+Y++ + + LA + K +Y AI Sbjct: 314 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 355 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A S++ +AY+ LA + EA + Sbjct: 356 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 383 >gi|261415270|ref|YP_003248953.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371726|gb|ACX74471.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327749|gb|ADL26950.1| putative BatE protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 256 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 32/112 (28%), Gaps = 16/112 (14%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78 + F I A L + + LD+ T E +F +A + Sbjct: 1 MKNFKQIILTIAAALILTSAASAADKCNGLDAGT-------------KAYNENDFERAID 47 Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + C + V Y +GK A + + +P ++ Sbjct: 48 EWRTCVDE---GIVNADLYYNLGNAYYRSGKLGFAIFYYKSALRLHPSDDDI 96 >gi|124024552|ref|YP_001018859.1| hypothetical protein P9303_28641 [Prochlorococcus marinus str. MIT 9303] gi|123964838|gb|ABM79594.1| Hypothetical protein P9303_28641 [Prochlorococcus marinus str. MIT 9303] Length = 581 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 10/90 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + ++ Y + + L+ +++ A +N+ R + L V + G YQ+ Sbjct: 425 NPQHSDAYYNRGIAKLESKDYQGAIADYNKAIRI---GTQNARIYLNRGLVYDNLGDYQR 481 Query: 113 AASLGEEYITQYPESKNVDYVY-YL-VGMS 140 A + + I P+ Y Y+ G++ Sbjct: 482 AIADYNKAIELDPQ-----YALAYVNRGLA 506 >gi|13324598|gb|AAK18802.1|AF305610_1 LMP1 [Borrelia burgdorferi] Length = 1179 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK +N+ A ++ P + + A +G QA S E+ Sbjct: 1008 LYLKASINLKNENYPNAISLYSSVIEKNPEN---TSAYINLAKAYEKSGNKAQAISTLEK 1064 Query: 120 YI 121 I Sbjct: 1065 II 1066 Score = 35.5 bits (81), Expect = 7.2, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 61/182 (33%), Gaps = 34/182 (18%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 ++ + ++ K +++ + + I P + +Y YL + Sbjct: 973 AIYNLSIAKFENNKLEESLEIINKAINLNP--EKSEY-LYLKASINLKNENYPN------ 1023 Query: 156 KLMLQYMSRIVERYTN--SPYVKGARFYVTVGRNQLAAKEVE-------------IGRYY 200 + S ++E+ S Y+ A+ Y G A +E +G Y Sbjct: 1024 --AISLYSSVIEKNPENTSAYINLAKAYEKSGNKAQAISTLEKIINKNNKLALNNLGILY 1081 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS---LIQERY 257 K+ Y AI F+ + N EA L + + A++++ ++ Sbjct: 1082 KKQKNYQKAIEIFEKAIKN-----SDIEAKYNLATTLIEINDNTRAKDLLKEYTKLKPNN 1136 Query: 258 PQ 259 P+ Sbjct: 1137 PE 1138 >gi|42525946|ref|NP_971044.1| TPR domain-containing protein [Treponema denticola ATCC 35405] gi|41815996|gb|AAS10925.1| TPR domain protein [Treponema denticola ATCC 35405] Length = 338 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 45/130 (34%), Gaps = 15/130 (11%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97 + ++RD Q E + ++++ ++A Y+ + P + Sbjct: 21 CKTTNRDTTDTEKKQNYSQAEYFNIAGNTAKEKKDGTRAIYYYTKAIEADP--AYIE-AY 77 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 L + Y ++++A + + I P+ D YY G+ + D Sbjct: 78 LNRGEMYYYVNEHEKALADFDRIIELNPKE---DKAYYFKGL--------LFNDAGNYNK 126 Query: 158 MLQYMSRIVE 167 ++ ++ + Sbjct: 127 AIENLNTAIN 136 >gi|116622674|ref|YP_824830.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116225836|gb|ABJ84545.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 389 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 20/37 (54%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 +++L+ F + +Y +A + ++ I Q P + ++ Sbjct: 18 QQNLIEEGFSHFYNLEYDEAIASFDKAIAQNPSNPDI 54 >gi|297800644|ref|XP_002868206.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297314042|gb|EFH44465.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 2149 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 8/54 (14%), Positives = 21/54 (38%), Gaps = 11/54 (20%) Query: 82 QCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY--PESKNV 130 + P ++ K +M F ++ L + Y+ ++ P ++N+ Sbjct: 890 KVETRHPIRLYSRYVDKVHIMLKFTH------EEVRDLIQRYLREHPDPNNENM 937 >gi|209523063|ref|ZP_03271620.1| hypothetical protein AmaxDRAFT_0437 [Arthrospira maxima CS-328] gi|209496650|gb|EDZ96948.1| hypothetical protein AmaxDRAFT_0437 [Arthrospira maxima CS-328] Length = 89 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 3/77 (3%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 SS D + + E+ + +K++ + +A + P V K+ + Sbjct: 2 SSTDRSKEELNPDLNSLEL---GLAAIKQKQYQQAIALLEPIADSQPHTKVGFKAQIGLV 58 Query: 102 FVQYSAGKYQQAASLGE 118 +G+ +A SL + Sbjct: 59 KAYDRSGQSDRAISLCQ 75 >gi|332283618|ref|YP_004415529.1| hypothetical protein PT7_0365 [Pusillimonas sp. T7-7] gi|330427571|gb|AEC18905.1| hypothetical protein PT7_0365 [Pusillimonas sp. T7-7] Length = 147 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 16/114 (14%), Positives = 36/114 (31%), Gaps = 26/114 (22%) Query: 51 VTDVRYQREVYEK-------AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM---- 99 + E+YE+ E +F A E + Q P + L Sbjct: 1 MEPTELPDELYEQIESLSEAGNDCSDEGDFEGAIENWRQALALLP------EPQLDWEAA 54 Query: 100 ------SAFVQYSAGKYQQAASLGEEYITQY-PESKNVDYVYYLVGMSYAQMIR 146 Y + +++ A + P+ + +++Y++G S ++ Sbjct: 55 TWLYASLGDAYYQSSEFEMAKDAL--FTALNCPDGQANPFIHYMLGKSLLRLND 106 >gi|151946817|gb|ABS19055.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 187 [Homo sapiens] Length = 1092 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 38/141 (26%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSXALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|320354473|ref|YP_004195812.1| TPR repeat-containing protein [Desulfobulbus propionicus DSM 2032] gi|320122975|gb|ADW18521.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobulbus propionicus DSM 2032] Length = 581 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 85/208 (40%), Gaps = 37/208 (17%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 YL+ D R +Y A + L+++ ++A + S P LL+ A + + Sbjct: 113 YLEKHPDKTGMRMLY--AKVLLRQKKNAEAMRQYQLISDRHPDDP---AILLLLAEMYLN 167 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 A + ++A L E + Q P Y +++ M R Q + +++ ++ + Sbjct: 168 ANQPERARPLLERILAQDP----AAY------LAHVLMARLCQL-QALPEEAIEHYTKAL 216 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 E RN + ++E+G Y+K G++ A+ ++ ++ E Sbjct: 217 E------------------RNWSSELQMELGELYVKAGQHDEAVRLYRDIIER---DEQN 255 Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQ 254 E A L+ Y+ D+A E ++ ++ Sbjct: 256 EGARVALIHVYLLQKKDDQALEELNRLK 283 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 75/197 (38%), Gaps = 39/197 (19%) Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 L++++ +A E N+ +A ++ L A + KY +A ++ E+ + + Sbjct: 267 LLQKKD-DQALEELNRLKS---YAEQPQRVDLTIARLYAKQKKYDKAVAIVEKILHK--- 319 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 +N+ Y + + + Q Q L+ + +I + + + Sbjct: 320 -ENLSEARYFLAVLFVQ--------QEKYGRALRQVRQIDREAPEYLDALFLQVRILREQ 370 Query: 187 NQLAA-KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMD 244 N+LA K++ E++AA D +AE M L+ A Y L D Sbjct: 371 NKLAEAKQLL--------EEHIAAA-----------DTRNAE--MYILLAALYQDLGRDD 409 Query: 245 EAREVVSLIQERYPQGY 261 +++V+ E +P Sbjct: 410 LSKQVLLEGIEGFPNDE 426 >gi|253827496|ref|ZP_04870381.1| flagellar functional protein [Helicobacter canadensis MIT 98-5491] gi|253510902|gb|EES89561.1| flagellar functional protein [Helicobacter canadensis MIT 98-5491] Length = 797 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 68/190 (35%), Gaps = 25/190 (13%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG---KYQQAASLGEEYI 121 LK ++ +A + N+ + +P R L M G Y++ SLG+ ++ Sbjct: 188 QNLLKRGSYQEALDSINEMLQIYPETIFKRDVLFMKLQALDEIGGEENYEEIISLGKAWL 247 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + YP ++ V L+ +Y +M + Y RI + Y N Sbjct: 248 SAYPADIHIPEVLLLLAENYVKM--------NFFEEASYYYDRIFKEYKNDK--SELLAR 297 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 ++ G+ +RG+ + +Q VL D E A A L E Y Sbjct: 298 LSYGQKI------------FERGDKKMPLELYQSVLNQTQDLEIASLAALLLGEYYREAG 345 Query: 242 LMDEAREVVS 251 A+E + Sbjct: 346 DKQRAQEYLK 355 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 39/110 (35%), Gaps = 11/110 (10%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + + L ++ +++ Y + + + F +++ +E Y I Sbjct: 193 RGSYQEALDSINEMLQIYPETIFKRDVLFMKLQALDEIGGEE-----------NYEEIIS 241 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + L+ Y H E + L E YV + +EA I + Y Sbjct: 242 LGKAWLSAYPADIHIPEVLLLLAENYVKMNFFEEASYYYDRIFKEYKNDK 291 >gi|226325486|ref|ZP_03801004.1| hypothetical protein COPCOM_03291 [Coprococcus comes ATCC 27758] gi|225206229|gb|EEG88583.1| hypothetical protein COPCOM_03291 [Coprococcus comes ATCC 27758] Length = 456 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 3/72 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSR-DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +Y A ++ N+ A + + D ++ LL A+ G A S E Sbjct: 359 LYSTAQYEVQSGNYDDAISDLEKIQKMDDSYSDGGVYKLLGDAYA--GKGDKDNAKSNYE 416 Query: 119 EYITQYPESKNV 130 + T YP ++ Sbjct: 417 KAATDYPGTQAA 428 >gi|224532842|ref|ZP_03673457.1| TPR domain protein [Borrelia burgdorferi WI91-23] gi|224512231|gb|EEF82617.1| TPR domain protein [Borrelia burgdorferi WI91-23] Length = 379 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 36/212 (16%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 K+ N+ KA Y+ +C P +L + Y++A + EEY+ PE+ Sbjct: 70 KKNNYDKAIVYYQKCLVKHPSNNY---ALFGLGDCYRNLDNYKKATDIWEEYLKYDPENI 126 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180 V V SY ++ + + Q +++E ++ Y + Sbjct: 127 T---VLTRVAASYRKL--------KNFQKSKQTYLKVMELMPDNDYALVGIGHLYYDFKE 175 Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 Y + L E+ IG Y K E+ I F+ L + A Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGIYFFKKALEI---SPSNFYA 232 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + L + Y EA + I E+ P+ Sbjct: 233 VFGLADCYRGNKEYKEALKYWIDIIEKDPKNN 264 >gi|183221128|ref|YP_001839124.1| putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911219|ref|YP_001962774.1| hypothetical protein LBF_1689 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775895|gb|ABZ94196.1| Hypothetical protein LBF_1689 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779550|gb|ABZ97848.1| Conserved hypothetical protein; putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 515 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 45/161 (27%), Gaps = 48/161 (29%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLL-----------------------MSAFVQYSA 107 KA+ N+ FP + A + L A+ + + Sbjct: 174 GEREKAFVKLNKAIDLFPGSHYAENASLLISFLEDGQKKKEELKSKKKSPEELAYSLFQS 233 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G Y++ E + Y+ S ++ T ++ ++V+ Sbjct: 234 GDYEETLKTLESLPVL--TNDQS----YIKARSMEEL--------GKTSNAVKEYIQLVK 279 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208 + N A + + IG +Y + VA Sbjct: 280 QKENKEVAIRANRRL-----------LLIGNFYQENKSLVA 309 >gi|119486472|ref|ZP_01620530.1| kinesin light chain-like protein [Lyngbya sp. PCC 8106] gi|119456374|gb|EAW37505.1| kinesin light chain-like protein [Lyngbya sp. PCC 8106] Length = 1127 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 59/180 (32%), Gaps = 29/180 (16%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWER-----------QSSRDVYLDSVTDVRYQREVYEKA 64 Y + + +L F + V VG +S + + ++ + ++A Sbjct: 58 LYPMKRTSLNPFLWLTV--FVGCSGLLTAIPPVIGQTNSAVLLVQQSDELEEANRLEQQA 115 Query: 65 VLFLKEQNFSKAY----EYFNQCSR----DFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 V ++ +++A R + P VA +SL A + G+Y +A L Sbjct: 116 VQLYQQGKYNEAIPILKRVLEIIERLLGENHP--DVA-QSLNNLAILYRDQGRYSEAEPL 172 Query: 117 GEEYITQY-----PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + +T Y +V + Y R + + + + E + + Sbjct: 173 FQRSLTIYEKALGENHPDVAQSLNNLAQLYYSQGRYSEAEPLHQRSLAIREKALGENHPD 232 >gi|157131465|ref|XP_001655859.1| hypothetical protein AaeL_AAEL012104 [Aedes aegypti] gi|108871530|gb|EAT35755.1| conserved hypothetical protein [Aedes aegypti] Length = 1326 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 60/191 (31%), Gaps = 39/191 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYSAGKYQQAASLGEE 119 A ++++ NF KA E P ++ A ++ + + + + Sbjct: 666 ATADFYMQQGNFVKAIELLKTIK---PNQQYYIQAKTKMAHFYLVHKKDR----LAYAQC 718 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + G S M+ D + ++ + ++ + A Sbjct: 719 FRELVANCP---------GPSSYLMLGDAYMSIQEADEAIEAYRQAQKQNP-----RDA- 763 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 LA+K +GR Y+K +Y AI +Q +A L E ++ Sbjct: 764 --------LLASK---LGRAYVKTHQYKKAISYYQEAIA----TPENSLLKLDLAELFLK 808 Query: 240 LALMDEAREVV 250 L A + + Sbjct: 809 LKQYSNAEQTL 819 >gi|332707846|ref|ZP_08427868.1| hypothetical protein LYNGBM3L_58420 [Lyngbya majuscula 3L] gi|332353383|gb|EGJ32901.1| hypothetical protein LYNGBM3L_58420 [Lyngbya majuscula 3L] Length = 310 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 54/153 (35%), Gaps = 32/153 (20%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 G Y++A I ++P Y Y ++ V + + ++ + Sbjct: 6 EMGDYEKAYQELNTQIHKFPGH----YELY-------NLLGAVASECEHFEKAIRAYQKA 54 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 ++ NS +A + + Y K GE A+ +Q+VL + +H Sbjct: 55 LKIRPNSD---------------VARHNLGLA--YRKNGEPEKALKEYQIVLNS---GKH 94 Query: 226 AEEAMARLVEAYVALALMDEAREVVS-LIQERY 257 + + M L + Y L ++A ++ + Sbjct: 95 SYQLMHNLGDTYFDLGHFEQAATYFRNALKHNF 127 >gi|271967342|ref|YP_003341538.1| hypothetical protein Sros_6063 [Streptosporangium roseum DSM 43021] gi|270510517|gb|ACZ88795.1| hypothetical protein Sros_6063 [Streptosporangium roseum DSM 43021] Length = 143 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 40/101 (39%), Gaps = 6/101 (5%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 S ++ + +++ + L E + + A + + P + R++ Sbjct: 6 SGPSDSPSPETGAPAGDVYDWFQRGMKLLAEGSPAAAVALLERAADAEPESRSIREA--- 62 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 A Q+++ +Y +A +I + DY Y+ +G++ Sbjct: 63 LARAQFNSRQYAEAVDSF-RWIVD--ANPAEDYAYFGLGLA 100 >gi|296083407|emb|CBI23360.3| unnamed protein product [Vitis vinifera] Length = 197 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 9/83 (10%), Positives = 29/83 (34%), Gaps = 1/83 (1%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAF 102 V + + +++ + +S+A E+F + P + + A Sbjct: 8 EKVAKEQAERRATAQLMFDLGQRAYGKGTYSRAIEFFEGALTIIPPPTLFGGEIQIWLAM 67 Query: 103 VQYSAGKYQQAASLGEEYITQYP 125 + ++ +L ++ ++P Sbjct: 68 AYEANNRHADCIALYQQLERKHP 90 >gi|229122896|ref|ZP_04252104.1| TPR domain protein [Bacillus cereus 95/8201] gi|228660480|gb|EEL16112.1| TPR domain protein [Bacillus cereus 95/8201] Length = 304 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 56/151 (37%), Gaps = 36/151 (23%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 +++K++ + +A E F + P + ++ A Y+ G+ ++A E ++ Sbjct: 75 GDIYMKQKKWEEAKEAFQKSISIQP----SDEAYHNVAVAHYNLGELEEA---SEFFLR- 126 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 + + DY+ Y SY + + D+ K L +R Sbjct: 127 --AAGDSDYIMY----SYVKCLIDLGR-TTEAKEKLDAFNR------------------- 160 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 N L E+ + Y++ Y AI F+ Sbjct: 161 ESDNFLG--EMMVADLYVELNCYKEAIEWFE 189 >gi|227828833|ref|YP_002830613.1| hypothetical protein M1425_2607 [Sulfolobus islandicus M.14.25] gi|238621025|ref|YP_002915851.1| Tetratricopeptide TPR_2 repeat protein [Sulfolobus islandicus M.16.4] gi|227460629|gb|ACP39315.1| Tetratricopeptide TPR_2 repeat protein [Sulfolobus islandicus M.14.25] gi|238382095|gb|ACR43183.1| Tetratricopeptide TPR_2 repeat protein [Sulfolobus islandicus M.16.4] Length = 302 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 45/117 (38%), Gaps = 24/117 (20%) Query: 63 KAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 K + + + +++A E + + K+L A+ ++ GKY+QA + I Sbjct: 149 KGDILFQLKKYNEAIEEYRTNLND--------DKNLYAIAYTYFTIGKYEQALEYYDRAI 200 Query: 122 TQYPESKNVDYVYYLVG--MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 PE Y Y + + + I + + + ++ ++PY+K Sbjct: 201 GVNPEDP---YHYEGKARTLIFMEKIN----------EAYETIKKAIDIDPDNPYIK 244 >gi|187918082|ref|YP_001883645.1| mucin 2 precursor [Borrelia hermsii DAH] gi|119860930|gb|AAX16725.1| mucin 2 precursor [Borrelia hermsii DAH] Length = 605 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 58/168 (34%), Gaps = 23/168 (13%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 Y + + + +K +N+ +A + ++ + +P + A + +A Sbjct: 37 YSQRLIKIGQEEIKNKNYLQAIKILSEAIQKYP---KVQNGYYFLAIAYRENNQLTEAEG 93 Query: 116 LGEEYITQYPESKNVDYVYY-LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + I ++DY Y +G + + L ++Y S V+ N Sbjct: 94 ALLDGIAI---GGDIDYKLYFELGNIMFK------RGEGYYNLAIKYYSNSVKNMPNYDK 144 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 N+ A VE G+ K +Y A + + + +YS Sbjct: 145 A---------LLNR-ANSYVEQGKINFKEKDYKNAWDSYSMAIHDYSQ 182 >gi|308802594|ref|XP_003078610.1| COG0457: FOG: TPR repeat (ISS) [Ostreococcus tauri] gi|116057063|emb|CAL51490.1| COG0457: FOG: TPR repeat (ISS) [Ostreococcus tauri] Length = 1474 Score = 37.0 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 44/158 (27%), Gaps = 39/158 (24%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA----ASLGEE 119 A ++L + + KA F+ R P + + + +G + A + + Sbjct: 625 ANIYLSQGHTEKAIALFDIAIRRDPVSAIGH---FNIGNAHFMSGDWASARTSYLAALDR 681 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + Y + M+ DV + K Sbjct: 682 -------EPH-----YYKALYNLAMLLDVT--------------GFI------AEAKDTM 709 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 R +G Y+K G++ A +F+ L Sbjct: 710 KRAVEIRRSDVRGVYAMGLLYVKLGQWKKAEEQFKNAL 747 >gi|329847187|ref|ZP_08262215.1| transglutaminase-like superfamily protein [Asticcacaulis biprosthecum C19] gi|328842250|gb|EGF91819.1| transglutaminase-like superfamily protein [Asticcacaulis biprosthecum C19] Length = 1097 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 12/40 (30%), Gaps = 3/40 (7%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 AFV + Y A + P YL G+ Sbjct: 745 QAFVYWRRLDYPAAIDAVTRVLDINPADPA---ARYLRGL 781 >gi|85682784|gb|ABC73374.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 68 [Homo sapiens] Length = 1305 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYRSAKEAYEQLLQT 231 >gi|289163725|ref|YP_003453863.1| TPR repeat protein, weakly similar to eukaryotic proteins [Legionella longbeachae NSW150] gi|288856898|emb|CBJ10712.1| TPR repeat protein, weakly similar to eukaryotic proteins [Legionella longbeachae NSW150] Length = 1060 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 36/255 (14%), Positives = 78/255 (30%), Gaps = 52/255 (20%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 +FF++ ++ S D + Q + ++ + E+++ KA + Sbjct: 1 MLLRILFFAVLSLLVINSSPSYS--------LDSQAQSALPKEGLQAEMEKDWEKAISIY 52 Query: 81 NQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 P R + + Y KY A + + P + Sbjct: 53 TGLLLKKPDNIDLWLRVAQIE-----YHLKKYPLAIDAYKHALRIQPNN----------- 96 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN----------- 187 ++ + + ++ K L ++ ++ ++ A+ +T Sbjct: 97 VTLHKDLSEIYAAANQPKEALIAINEAIKLSPDNVDYLLAKAKITNWNKQPAVALESYQK 156 Query: 188 --QLAAKE----------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 QL E +EIGR + Y AI + V+ D E + + Sbjct: 157 ILQLGKSEKIKVNTKEILIEIGRLQTQLKNYPDAINSYNQVIFLNPDNPKLYEEL---AQ 213 Query: 236 AYVALALMDEAREVV 250 Y A D+A + + Sbjct: 214 VYAAAKEPDKAIDTI 228 >gi|229541640|ref|ZP_04430700.1| Tetratricopeptide TPR_2 repeat protein [Bacillus coagulans 36D1] gi|229326060|gb|EEN91735.1| Tetratricopeptide TPR_2 repeat protein [Bacillus coagulans 36D1] Length = 565 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 35/83 (42%), Gaps = 8/83 (9%) Query: 63 KAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + L+L+ + + +A + S + ++ ++++AA+ E+ Sbjct: 434 QGDLYLERKKYKEAIRAYEAANQISHSY-GGEKTIEAYFNLGIAYVENQQFEKAAAAFEK 492 Query: 120 YITQYPESKN--VDYVYYLVGMS 140 Y ++K ++ +YY GM+ Sbjct: 493 M--LYQKNKANPIELMYYHYGMA 513 >gi|167763146|ref|ZP_02435273.1| hypothetical protein BACSTE_01516 [Bacteroides stercoris ATCC 43183] gi|167698440|gb|EDS15019.1| hypothetical protein BACSTE_01516 [Bacteroides stercoris ATCC 43183] Length = 283 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 27/68 (39%), Gaps = 3/68 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + +A ++++ + A ++ ++LLM A++ Y+ A + E Sbjct: 97 LLNRATIYMELGRNNLAQADYSLVLDL---EKDNEEALLMRAYIYMQQRDYKMAKADYER 153 Query: 120 YITQYPES 127 + P S Sbjct: 154 LLKVNPTS 161 >gi|146101793|ref|XP_001469207.1| MAP kinase kinase-like protein; protein kinase [Leishmania infantum] gi|134073576|emb|CAM72310.1| MAP kinase kinase-like protein [Leishmania infantum JPCM5] Length = 1343 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 15/139 (10%), Positives = 44/139 (31%), Gaps = 33/139 (23%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119 E+ K + +A Y+ Q P + +S F ++ +++++A+ + Sbjct: 49 EEGNEAFKAGRYHEAIRYYTQAIEVDPDSEFLYTNRS-----FAYFNIKEFEKSAADAAK 103 Query: 120 -------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + + Y +G++ + D + + + S Sbjct: 104 AVEINANFFKGH----------YRLGLAQMSL-NDFGHAMESLRKAWALA-------P-S 144 Query: 173 PYVKGARFYVTVGRNQLAA 191 + R + +++A Sbjct: 145 ENKEAIRVAMAKCESKMAR 163 >gi|118577182|ref|YP_876925.1| TPR repeat protein [Cenarchaeum symbiosum A] gi|118195703|gb|ABK78621.1| TPR repeat protein [Cenarchaeum symbiosum A] Length = 206 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 9/73 (12%), Positives = 28/73 (38%), Gaps = 3/73 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + ++A ++ + +A ++ + P A + + G +++A S Sbjct: 8 DSLLDEANQLFLKKRYDEAVHFYEEVLDTDPGNLSAIN---NAGYALSKTGSFEKALSYY 64 Query: 118 EEYITQYPESKNV 130 + + YP ++ Sbjct: 65 GKGLELYPGDVSI 77 >gi|310642524|ref|YP_003947282.1| hypothetical protein PPSC2_c3081 [Paenibacillus polymyxa SC2] gi|309247474|gb|ADO57041.1| Hypothetical protein PPSC2_c3081 [Paenibacillus polymyxa SC2] Length = 210 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 30/88 (34%), Gaps = 5/88 (5%) Query: 38 WERQSSRDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 R + D ++E+ + + + + + +A + F Q FP + + Sbjct: 58 CLRAAGFSAEADMSDAELPEKELPAFNRGQGYYRLLMYPEAIQQFEQVLEHFPDS-W--Q 114 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQ 123 S + + +A S ++ + Sbjct: 115 SRIYMGMAHFQLDDPAEAISQFQKVLHL 142 >gi|309791748|ref|ZP_07686238.1| Lytic transglycosylase catalytic [Oscillochloris trichoides DG6] gi|308226241|gb|EFO79979.1| Lytic transglycosylase catalytic [Oscillochloris trichoides DG6] Length = 787 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 22/53 (41%) Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A +Q ANY D A EA+ R + L A + + ERYPQ Sbjct: 375 ASVAYQEYAANYPDDPRAPEALDRAAQLRERLGDSAGALAIQRTLGERYPQSS 427 >gi|294338857|emb|CAZ87191.1| putative Protein prenylyltransferase [Thiomonas sp. 3As] Length = 364 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 53/150 (35%), Gaps = 27/150 (18%) Query: 42 SSRDVYLDSVTDVRYQREVYE--KAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSL 97 SS +D++ + + Y+ K V+ +++ ++A + F + +P ++ Sbjct: 37 SSALTQVDTLLTQKPKDPQYQFLKGVILTEQKKDAQAIKIFQSLTEQYPELPEPYNNLAV 96 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 L + Q G+Y +A + + I P Y + I KL Sbjct: 97 L---YAQ--QGQYDKARAALDMAIRTNPS--------YATAQANLGDI--------YAKL 135 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 Q + ++ + AR + + R Sbjct: 136 ASQAYQKALQLAPD--ENASARVKLNLIRE 163 >gi|289207527|ref|YP_003459593.1| hypothetical protein TK90_0342 [Thioalkalivibrio sp. K90mix] gi|288943158|gb|ADC70857.1| Tetratricopeptide TPR_2 repeat protein [Thioalkalivibrio sp. K90mix] Length = 582 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 61/206 (29%), Gaps = 65/206 (31%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A + L+ + S A E F Q P +AR++ + A + G+Y A + Sbjct: 371 AARMTLEIEGESAARERFEQMQ-QGPDTELARRAYVGEANLLREKGEYTAARERLNRGLV 429 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 Q+P + Y+ G+ + + + I++ + Sbjct: 430 QFPGDTRL---LYMRGLVHERQDD--------IEAAEADFRAILDNDPEN---------- 468 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY----- 237 VAA+ LA+ + EEA+ + AY Sbjct: 469 ------------------------VAALNALGYTLAD--RTDRYEEALDLIERAYAQEPD 502 Query: 238 ------------VALALMDEAREVVS 251 L +DEA + + Sbjct: 503 DAAIIDSYGWVLYRLGRLDEAEDFLR 528 >gi|289192214|ref|YP_003458155.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22] gi|288938664|gb|ADC69419.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22] Length = 635 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 24/66 (36%), Gaps = 1/66 (1%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 V + + + +A EYF + P + + Y+ Y +A ++ + Sbjct: 82 GVCYYSKGEYGRAIEYFEKALELCP-DEEKWRIWISLGDCYYNIRDYDKAIDYYKKALKM 140 Query: 124 YPESKN 129 PE K Sbjct: 141 CPEDKK 146 >gi|238650408|ref|YP_002916260.1| Tol system periplasmic component [Rickettsia peacockii str. Rustic] gi|238624506|gb|ACR47212.1| Tol system periplasmic component [Rickettsia peacockii str. Rustic] Length = 245 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 18/46 (39%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 A Y K +A + +I +YP S + Y+ G + + Sbjct: 122 DLALAAYKDNKLTEAKDKFKNFIQKYPNSLLISNAYFWYGECFFKQ 167 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 14/133 (10%), Positives = 45/133 (33%), Gaps = 12/133 (9%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ- 111 D+ ++ Y+ A+ K+ ++A + F + +P + + + + Y Sbjct: 113 DIAPDKQAYDLALAAYKDNKLTEAKDKFKNFIQKYPNSLLISNAYFWYGECFFKQKDYNG 172 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A + + Y P+ + +S ++ + T+ +++ + + Sbjct: 173 AAVNYLKGYKEL-PKGAKSSDGLLKLALSLGEL--------KKTQEACNMLAKFDKEFPT 223 Query: 172 SPYVKGARFYVTV 184 + A + Sbjct: 224 NR--TAASKKMAE 234 >gi|255038772|ref|YP_003089393.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053] gi|254951528|gb|ACT96228.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053] Length = 748 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Query: 94 RKSLLMSAFVQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 ++L + + + +A + E +++YP+++ D +YYL+ +S +Q Sbjct: 570 EEALYNLGKIYRFDLKESNRAIAAFERVLSEYPKTEYKDEIYYLLFLSN---------EQ 620 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARF 180 A + + S+++ Y NS Y + Sbjct: 621 NAAQK-DSWKSKLLSEYPNSTYARLVNK 647 >gi|222481092|ref|YP_002567329.1| Tetratricopeptide TPR_2 repeat protein [Halorubrum lacusprofundi ATCC 49239] gi|222453994|gb|ACM58259.1| Tetratricopeptide TPR_2 repeat protein [Halorubrum lacusprofundi ATCC 49239] Length = 301 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 5/76 (6%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A L+E + +A + + R + A + A+ + +G+ +QA E + Sbjct: 109 AAHAELEE--YDQAIGAYEEALRIDGDSEHAATAETNLAYALWESGRGEQALEHAERAVE 166 Query: 123 QYPESKNVDYVYYLVG 138 +Y G Sbjct: 167 I---DPRFAEAWYNRG 179 >gi|149179248|ref|ZP_01857813.1| TPR repeat protein [Planctomyces maris DSM 8797] gi|148841927|gb|EDL56325.1| TPR repeat protein [Planctomyces maris DSM 8797] Length = 609 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 43/138 (31%), Gaps = 21/138 (15%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKY 110 + +Y + ++ + KA E + + P + L+ AG+ Sbjct: 486 NPQYAPAYFTLGRIWESRGDLDKARELYEATLQHAPGFDSAWYNLGLIDL-----KAGRQ 540 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 +A + + + P + + +G+ Y Q+ + + Sbjct: 541 PEAIAAFQRALEINPRHAS---AHNNLGVIYLF--------QQNFSQAKFHFEEALHIDP 589 Query: 171 NSPYVKGARFYVTVGRNQ 188 +K A+ + ++Q Sbjct: 590 E---LKQAKQGLEYMKSQ 604 >gi|170740913|ref|YP_001769568.1| TPR repeat-containing protein [Methylobacterium sp. 4-46] gi|168195187|gb|ACA17134.1| TPR repeat-containing protein [Methylobacterium sp. 4-46] Length = 292 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 76/234 (32%), Gaps = 43/234 (18%) Query: 39 ERQSSRDVYLDSVTDV----RYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPF--AG 91 ++ + DV + S+TDV Y + + + N+ +A F + + P + Sbjct: 47 DKTGAADVNIASLTDVIQRNPSDPAAYNTRGAAYARAGNYGEAIADFTKAVQLDPNSASA 106 Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 + ++L +G+ A +++ N Y +G + Q Sbjct: 107 YSNRAL-----AYRQSGRNDAAL---QDFTRALTADPNYSAAY--IGRANLQ------RA 150 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY------------ 199 + +S+ + S AR + R IG + Sbjct: 151 MGNYEAAYSDLSQAIRLTPESAEAYHAR---GLVRQAQGQHRAAIGDFDAAIDRNPFVSA 207 Query: 200 -YLKRGEYVAAIPRFQLVLANYSDAEHA----EEAMARLVEAYVALALMDEARE 248 Y RG+ + A ++ + +++ A + ++ A AY EA E Sbjct: 208 PYAARGQSLIATNQYDKAIEDFNAALNVNNKDADSWAYRGVAYEKSGRRQEAME 261 >gi|148733176|gb|ABR09246.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 66 [Homo sapiens] Length = 1377 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 38/141 (26%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ K + + ++ L A + I Sbjct: 151 QDVLYVDPXFCRAKEIHLRLGLMFKVNTDXKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|283785422|ref|YP_003365287.1| tetratricopeptide repeat protein [Citrobacter rodentium ICC168] gi|282948876|emb|CBG88478.1| tetratricopeptide repeat protein [Citrobacter rodentium ICC168] Length = 389 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 66/183 (36%), Gaps = 30/183 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ + +A + FNQ + + F A + L+ + + +Q+A + E + Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRVGALQ-QLLQIY--QATSDWQKAIEVAERLVKL 170 Query: 124 YPESKNVDYVYYLVGMSYAQMI-RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 E + V+ ++ ++ QM D+ K NS Sbjct: 171 GKEKQRVEIAHFYCELALQQMAGDDLDRAMTLLKKGAAADK-------NS---------- 213 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 A + +GR ++ +G+Y A+ Q V++ D E E + L Y L Sbjct: 214 -------ARVSIMMGRVWMAKGDYAKAVESLQRVIS--QDKELVSETLEMLQTCYQQLGK 264 Query: 243 MDE 245 +E Sbjct: 265 NEE 267 >gi|224418169|ref|ZP_03656175.1| flagellar functional protein [Helicobacter canadensis MIT 98-5491] gi|313141704|ref|ZP_07803897.1| flagellar functional protein [Helicobacter canadensis MIT 98-5491] gi|313130735|gb|EFR48352.1| flagellar functional protein [Helicobacter canadensis MIT 98-5491] Length = 785 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 68/190 (35%), Gaps = 25/190 (13%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG---KYQQAASLGEEYI 121 LK ++ +A + N+ + +P R L M G Y++ SLG+ ++ Sbjct: 176 QNLLKRGSYQEALDSINEMLQIYPETIFKRDVLFMKLQALDEIGGEENYEEIISLGKAWL 235 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + YP ++ V L+ +Y +M + Y RI + Y N Sbjct: 236 SAYPADIHIPEVLLLLAENYVKM--------NFFEEASYYYDRIFKEYKNDK--SELLAR 285 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 ++ G+ +RG+ + +Q VL D E A A L E Y Sbjct: 286 LSYGQKI------------FERGDKKMPLELYQSVLNQTQDLEIASLAALLLGEYYREAG 333 Query: 242 LMDEAREVVS 251 A+E + Sbjct: 334 DKQRAQEYLK 343 Score = 36.2 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 39/110 (35%), Gaps = 11/110 (10%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + + + L ++ +++ Y + + + F +++ +E Y I Sbjct: 181 RGSYQEALDSINEMLQIYPETIFKRDVLFMKLQALDEIGGEE-----------NYEEIIS 229 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + L+ Y H E + L E YV + +EA I + Y Sbjct: 230 LGKAWLSAYPADIHIPEVLLLLAENYVKMNFFEEASYYYDRIFKEYKNDK 279 >gi|145538077|ref|XP_001454744.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124422521|emb|CAK87347.1| unnamed protein product [Paramecium tetraurelia] Length = 844 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 79/224 (35%), Gaps = 32/224 (14%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + L ++ + A N FP + L M A + K QQ + E+ + Sbjct: 417 RGKLLQAQKKYDDAITCLNDGITKFPSN---IEILNMLALIYKITLKVQQELEIYEKILV 473 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 P+++ Y G++Y + + +D L+ ++ + + K +Y+ Sbjct: 474 IQPQNEL---CLYEKGLNYYNDLGLILFDLNNFSESLEIFIQLNK----TEQAKDLNYYL 526 Query: 183 TVGRNQLAAKEVEIG----RYYLKRGE------Y--VAAIP----RFQLVLANYSD---- 222 + N+ KE Y+K G+ Y + + +F + +Y + Sbjct: 527 GICYNE--KKEYFNVLNHLNQYVKSGKENLEKVYCIMGSANLFLLKFDESIESYQNCIKI 584 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 + +A +L Y L+DEA+E + P + Sbjct: 585 NPNNADAHYQLGNVYKQDKLLDEAKESFEQAVKIQPSNILYKQA 628 >gi|333031360|ref|ZP_08459421.1| WD40-like beta Propeller containing protein [Bacteroides coprosuis DSM 18011] gi|332741957|gb|EGJ72439.1| WD40-like beta Propeller containing protein [Bacteroides coprosuis DSM 18011] Length = 479 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Query: 95 KSL-LMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 ++ + A Y+ KY++A + E+++ YP + N Sbjct: 28 QAQTIDEARALYAHNKYEEAKPMFEKFLKSYPNNPN 63 >gi|330959357|gb|EGH59617.1| TPR repeat-containing von Willebrand factor, type A [Pseudomonas syringae pv. maculicola str. ES4326] Length = 571 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 14/110 (12%), Positives = 32/110 (29%), Gaps = 30/110 (27%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ L+ ++A + F + Y AG Y A + + Sbjct: 356 QQGQRLLEHHRPAEAAQRFED-------SRW-------KGVALYQAGDYASA---AQRFA 398 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + D +Y G + A+ + L + ++R + Sbjct: 399 E---GNSAAD--HYNRGNALARS--------GELEAALDAYEQALDRQPD 435 >gi|322503219|emb|CBZ38304.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1343 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 15/139 (10%), Positives = 44/139 (31%), Gaps = 33/139 (23%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119 E+ K + +A Y+ Q P + +S F ++ +++++A+ + Sbjct: 49 EEGNEAFKAGRYHEAIRYYTQAIEVDPDSEFLYTNRS-----FAYFNIKEFEKSAADAAK 103 Query: 120 -------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + + Y +G++ + D + + + S Sbjct: 104 AVEINANFFKGH----------YRLGLAQMSL-NDFGHAMESLRKAWALA-------P-S 144 Query: 173 PYVKGARFYVTVGRNQLAA 191 + R + +++A Sbjct: 145 ENKEAIRVAMAKCESKMAR 163 >gi|302851112|ref|XP_002957081.1| hypothetical protein VOLCADRAFT_98115 [Volvox carteri f. nagariensis] gi|300257637|gb|EFJ41883.1| hypothetical protein VOLCADRAFT_98115 [Volvox carteri f. nagariensis] Length = 572 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 13/104 (12%), Positives = 32/104 (30%), Gaps = 14/104 (13%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + +A + F + + P + ++ A G+ Q+AA + P+ + Sbjct: 118 AGRWREAADAFERANEKDP---LNVAVMMNLARALREEGRQQRAAEVYGAVTKLQPDHPS 174 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 +Y G + R + L + + + Sbjct: 175 ---AHYRRG--------AILRSIRHNEAALAAFRQHLRLHPEHQ 207 >gi|212635447|ref|YP_002311972.1| TPR domain-containing protein [Shewanella piezotolerans WP3] gi|212556931|gb|ACJ29385.1| TPR repeat protein [Shewanella piezotolerans WP3] Length = 342 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 55/166 (33%), Gaps = 37/166 (22%) Query: 51 VTDVRYQREVYEKAVLFLKE--QNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYS 106 V D VY A+ L + + A +YF P + ++L + Y Sbjct: 180 VPDRDSPARVYN-AIAILDDVQNDHESARKYFRLLLELQPHS-----AILISNLGYSYYL 233 Query: 107 AGKYQQAASLGEEYITQYPESKNVD---------YV---YYLVGMSYAQMI---RDVPYD 151 G+ A + I E +N+D YV Y ++ + D D Sbjct: 234 TGELTSAERYLRQAIR---EDQNLDRAWTNLGLVYVRKGLYKRALATFEQAMEPADALND 290 Query: 152 -------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 + + ++ R ++ + Y + A+ + + +L+ Sbjct: 291 LGYFLMLEGKYQQAIELFERAIDTSPS--YFEQAQKNLKRAKAELS 334 >gi|203284129|ref|YP_002221869.1| hypothetical protein BDU_209 [Borrelia duttonii Ly] gi|201083572|gb|ACH93163.1| hypothetical protein BDU_209 [Borrelia duttonii Ly] Length = 731 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 23/160 (14%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 +K +N+S+A + ++ + P + A + +A + I Sbjct: 33 GQEEIKNKNYSQAIKILSEAIQKHP---KEQDGYYFLAIAYRENNQLTEAEGALLDGIAI 89 Query: 124 YPESKNVDYVYY-LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 N+DY Y +G + + L ++Y S ++ N Sbjct: 90 ---GGNIDYKLYFELGNIMFK------RGKGYYNLAIRYYSSSIKNMPNYDKA------- 133 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 N+ A VE G+ K +Y A + + + +YS Sbjct: 134 --LLNR-ANSYVEQGKINFKEKDYKNAWDSYTMAIHDYSQ 170 >gi|196013721|ref|XP_002116721.1| hypothetical protein TRIADDRAFT_60779 [Trichoplax adhaerens] gi|190580699|gb|EDV20780.1| hypothetical protein TRIADDRAFT_60779 [Trichoplax adhaerens] Length = 1397 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 59/187 (31%), Gaps = 45/187 (24%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ-CSRD-----FPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 +++ + N+ +A + + + VA +S V Y+ G +++A S Sbjct: 1114 NIGLVYYDQGNYEEALPMYQKSLKIRLSVLGHEHSAVA-QSYNNIGAVYYAQGNHEEALS 1172 Query: 116 LGEEYITQ------YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + E+ + + +V Y +G Y R L Sbjct: 1173 MYEKSLKIRLSVQSH-NHPDVAQSYNNIGFIYCNQGRH--------DEAL---------- 1213 Query: 170 TNSPYVKGARFYVTVGRN---QLAAKEVEIGRYYLKRGEYVAAI--------PRFQLVLA 218 S Y K + + + +A IG Y +G+ AI R ++ Sbjct: 1214 --SMYEKSLEIRLLILDDNHPAIAQSYDNIGNLYDDQGKDEEAIPMYEKSLKIRLSVLKD 1271 Query: 219 NYSDAEH 225 NY D Sbjct: 1272 NYPDVAA 1278 >gi|216264688|ref|ZP_03436680.1| TPR domain protein [Borrelia burgdorferi 156a] gi|221217520|ref|ZP_03588990.1| TPR domain protein [Borrelia burgdorferi 72a] gi|225549782|ref|ZP_03770746.1| TPR domain protein [Borrelia burgdorferi 118a] gi|226320896|ref|ZP_03796447.1| TPR domain protein [Borrelia burgdorferi 29805] gi|215981161|gb|EEC21968.1| TPR domain protein [Borrelia burgdorferi 156a] gi|221192583|gb|EEE18800.1| TPR domain protein [Borrelia burgdorferi 72a] gi|225369590|gb|EEG99039.1| TPR domain protein [Borrelia burgdorferi 118a] gi|226233668|gb|EEH32398.1| TPR domain protein [Borrelia burgdorferi 29805] Length = 379 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 36/212 (16%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 K+ N+ KA Y+ +C P +L + Y++A + EEY+ PE+ Sbjct: 70 KKNNYDKAIVYYQKCLVKHPSNNY---ALFGLGDCYRNLDNYKKATDIWEEYLKYDPENI 126 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180 V V SY ++ + + Q +++E ++ Y + Sbjct: 127 T---VLTRVAASYRKL--------KNFQKSKQTYLKVMELMPDNDYALVGIGHLYYDFKE 175 Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 Y + L E+ IG Y K E+ I F+ L + A Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGIYFFKKALEI---SPSNFYA 232 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + L + Y EA + I E+ P+ Sbjct: 233 VFGLADCYRGNKEYKEALKYWLDIIEKDPKNN 264 >gi|138280889|gb|ABO72631.1| DnaJ-like protein [Microcystis aeruginosa PCC 7806] Length = 335 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 43/101 (42%), Gaps = 6/101 (5%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 ++ R + + T R + Y++ + +E+N+ A ++ Q P ++ L Sbjct: 62 KEYDRSLSPEIPTFQRSAEDFYQQGWHYAQEKNYQLAIAFYQQAIAINPQ-FW--QAYLQ 118 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 A V Y + +Q +S + + P + YY +G+S Sbjct: 119 RAEVYYHNQQDRQVSSDCRQVLQLKP---DCSQAYYYLGLS 156 >gi|158522486|ref|YP_001530356.1| peptidoglycan-binding LysM [Desulfococcus oleovorans Hxd3] gi|158511312|gb|ABW68279.1| Peptidoglycan-binding LysM [Desulfococcus oleovorans Hxd3] Length = 632 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 27/247 (10%), Positives = 75/247 (30%), Gaps = 38/247 (15%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE----VYEKAVLFLKEQNFSKAYEY 79 L I ++ G + R ++ +A + ++ + A + Sbjct: 5 LFIAAALTFLLTAGCPAPVTTLQKGGPAKPARTPSANSYYLFTQAQIEKEKGSLDSATAW 64 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 + P + ++ A + + +A E+ + +P+ +VD G Sbjct: 65 MTRAVAADPDSAYLKR---ELAILFLMKKENDRARQTVEQLLAVHPD--DVD------GQ 113 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 ++ + + Q + + + +E + + +G Sbjct: 114 I---LLAGILHHQGDLQGAARLYEQALENDPDQE-----------------GLYLVLGNL 153 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 Y ++G+ +A ++ + ++ D + L + L EA + P+ Sbjct: 154 YTEQGQMESAAGVYEKMTRHFPD---LWDGHFFLGNTRKEMGLAKEAEKSYKTAIRLNPE 210 Query: 260 GYWARYV 266 R+ Sbjct: 211 ALSPRFA 217 >gi|103487082|ref|YP_616643.1| hypothetical protein Sala_1597 [Sphingopyxis alaskensis RB2256] gi|98977159|gb|ABF53310.1| conserved hypothetical protein [Sphingopyxis alaskensis RB2256] Length = 313 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 34/108 (31%), Gaps = 14/108 (12%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 +D + + +V ++ S Y +N L GR YL G+ A Sbjct: 199 WDAKLYPEAQAQLKSVVAKWPQSSYAS-------FAQNLL-------GRAYLDEGKPSLA 244 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 F + A ++ + A L +A + + E Y Sbjct: 245 AVAFYNNYKDRPSGPRAPHSLMYMGVALDRLGRKADACKAFRELDEVY 292 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 14/127 (11%), Positives = 36/127 (28%), Gaps = 14/127 (11%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 ++ ++ Y+ + + +A +P + A + + Sbjct: 179 VEVPATGNETKDAYDYGYRLWDAKLYPEAQAQLKSVVAKWPQSSYASFAQNLLGRAYLDE 238 Query: 108 GKYQQAASLGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 GK AA + Y P + +G++ ++ R + Sbjct: 239 GKPSLAAVA---FYNNYKDRPSGPRAPHSLMYMGVALDRLGRKAD--------ACKAFRE 287 Query: 165 IVERYTN 171 + E Y + Sbjct: 288 LDEVYGD 294 >gi|67922186|ref|ZP_00515701.1| SLT:SLT [Crocosphaera watsonii WH 8501] gi|67856086|gb|EAM51330.1| SLT:SLT [Crocosphaera watsonii WH 8501] Length = 726 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 72/251 (28%), Gaps = 61/251 (24%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A LKE A + +++P + LL + + A + +E Sbjct: 91 YLLASDLLKEYEGGPALRQLERLEKEYP--PMKPYILLKRGRGYELSNETDLAQATWKEL 148 Query: 121 ITQYPESKNVDYVYYLVGM---SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 I YP+S Y +G SY + + + R+ E P + Sbjct: 149 IETYPDSLASAKALYKLGNYDPSYWDQ--GIERFPQHPNIQAVIRQRLKEN-PKQPQLLL 205 Query: 178 ARFYVTV-------GRNQLAAKEVE---------IGRYYL-KRGEYVAAI---------- 210 R++L + I Y Y AAI Sbjct: 206 LLAKYAANDPQSNPIRDRLVNQYAAQLTPEDWQIIADGYWIVNDYYKAAIAYQKAPKTPQ 265 Query: 211 ----------------PR------FQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 R ++ ++ + +AE A+ RL L+ A Sbjct: 266 NYYRIARGQQLQPRGNNRETVIAAYRQLMFGFPEAEETALALKRLA----QLSPPQTAIT 321 Query: 249 VVSLIQERYPQ 259 + I +++P+ Sbjct: 322 YLDEIIKKFPE 332 >gi|157829345|gb|ABV82622.1| ubiquitously transcribed tetratricopeptide repeat protein X-linked transcript variant 6 [Homo sapiens] Length = 1293 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 40/141 (28%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A + ++ Sbjct: 107 EDYPKALSAYQRYYSL-----QSDYWKNAAFLYGLGLVYFHY--------NAFQWAIKAF 153 Query: 163 SRIVERYT------------------NSPYVKGARFYVTVGRN----QL--AAKEVEIGR 198 ++ N+ Y + + + L A + I Sbjct: 154 QEVLYVDPSFCRAKEIHLRXGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAH 213 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 214 LYETQRKYHSAKEAYEQLLQT 234 >gi|53771850|gb|AAU93524.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 26 [Homo sapiens] Length = 1076 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKKIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|227329221|ref|ZP_03833245.1| hypothetical protein PcarcW_18557 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 389 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 65/194 (33%), Gaps = 29/194 (14%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ + +A E FNQ + F A + L+ + + A + E+ + Sbjct: 114 GRDYMAAGLYDRAEESFNQLVDEEDFRRSALQ-QLLQI--HQATSDWPTAIDVAEKLVKM 170 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 + VD ++ ++ M D D L + Sbjct: 171 GKDQLRVDIAHFYCELALLAMGSD-DLD-----KALTLL-----------------KKGA 207 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243 +Q A + +GR Y+ + +Y A+ + VL D E E + L E Y L Sbjct: 208 TADSQCARASIMMGRIYMAQQDYSRAVEALRQVLD--QDKELVSETLPMLQECYQHLDKP 265 Query: 244 -DEAREVVSLIQER 256 D A + ++E Sbjct: 266 LDWANFLRRCVEEN 279 >gi|212704558|ref|ZP_03312686.1| hypothetical protein DESPIG_02618 [Desulfovibrio piger ATCC 29098] gi|212671957|gb|EEB32440.1| hypothetical protein DESPIG_02618 [Desulfovibrio piger ATCC 29098] Length = 611 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 38/272 (13%), Positives = 89/272 (32%), Gaps = 55/272 (20%) Query: 46 VYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + + E YE+ + + KA F + +R + +A +LL +A ++ Sbjct: 76 TWPNRPAALFKAAECYEELSRRSFAISDARKAAGTFEEVARQHDSSRLADDALLRAARIR 135 Query: 105 Y-SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + A L + YP ++ +++ + A + +Q Sbjct: 136 ADRLKDTRGALELLDRLCRDYPRGDMYAEA--------RRLQQELAPAKTAARPAVQPAR 187 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQL----AAK---------EVEIGRY---YLKRGE-- 205 +I + + + A + + A K E G + Y R Sbjct: 188 QISDT-PPADDARQALQRYENAKKTMELLRADKRRSCWREPWENLQGDFMQVYQSRPNAT 246 Query: 206 --------------------YVAAIPR-FQLVL----ANYSDAEHAEEAMARLVE-AYVA 239 ++AA R + +L + + A++A+ + + + Sbjct: 247 VSAAALFRAGVSARSLADCSHLAADYRTARTLLLRVPEEFPGSALADDALLQAAQISAEE 306 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271 L EA +++ +++ YP+G L + Sbjct: 307 LKDRAEAMRLLARLEKEYPRGDMRPQATALRQ 338 >gi|210617943|ref|ZP_03291829.1| hypothetical protein CLONEX_04061 [Clostridium nexile DSM 1787] gi|210149082|gb|EEA80091.1| hypothetical protein CLONEX_04061 [Clostridium nexile DSM 1787] Length = 190 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 58/174 (33%), Gaps = 37/174 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASL 116 E+ V L+E+ + +A + F + + + L A+ + ++++A Sbjct: 42 EEGVSQLEEKQYEEASKSFQK--------EIDEEKNLDEAYRGMGIAYFEMEEFEKAIDA 93 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 E + ++ +Y +G+S +M + + + + Sbjct: 94 FGEALDN--GAEETATLYNFIGISNMKM--------ENYEEAVSAFEKGMSM----EDCS 139 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEA 229 + N + + E K G++ A + Y D++ +EA Sbjct: 140 DTMKR-EMLFNTVVSYE--------KLGDWDNAKEKVSEYNEQYPGDSKAEKEA 184 >gi|187251042|ref|YP_001875524.1| hypothetical protein Emin_0632 [Elusimicrobium minutum Pei191] gi|186971202|gb|ACC98187.1| hypothetical protein Emin_0632 [Elusimicrobium minutum Pei191] Length = 110 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 11/110 (10%), Positives = 29/110 (26%), Gaps = 22/110 (20%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSV----------------TDVRYQREVYE 62 + K A+ ++ ++ + + + Y Sbjct: 1 MKKIAILSVLALGSALVIACGGNKKTEAEEMPQQVVEVEEIKVQEVVVDPNKAAAEQKYI 60 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPF------AGVARKSLLMSAFVQYS 106 + + ++ A + + + + P A KS L A +Y Sbjct: 61 EGLRLFNAADYKGALKVWEEGEKLDPTNYDIKRGIDAAKSYLEQATAKYK 110 >gi|219849276|ref|YP_002463709.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485] gi|219543535|gb|ACL25273.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485] Length = 520 Score = 37.0 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 65/201 (32%), Gaps = 39/201 (19%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLK-----EQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 D + Q Y A L + ++ +AYE C+R P G + L Sbjct: 281 DEAYAEYEQIPPQHRHYVDARLRMSAILRLQKKPKQAYEILFACARLNPHHG---QLFLQ 337 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + Y G +QA E + P +YL+G Y M RD + A + + Sbjct: 338 MGKLLYDMGMTRQAVRAFERAVQLLPTD---AQAHYLLGFVYNTMGRD-TWALAAWRKAV 393 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 Q A R ++G Y++RG Y A FQ VL Sbjct: 394 QL-------------APDAHS----LR-------FDLGYMYIRRGRYDLAAKEFQQVLEQ 429 Query: 220 YSDAEHAEEAMARLVEAYVAL 240 + D + L Y L Sbjct: 430 WPDDIETQ---FMLGLCYKEL 447 >gi|223935403|ref|ZP_03627320.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514] gi|223895813|gb|EEF62257.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514] Length = 288 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 49/136 (36%), Gaps = 18/136 (13%) Query: 57 QREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++Y E+ L + + A FN+ + P + +A L AG ++A Sbjct: 46 NPQLYLERGELHRLHEEWEGALADFNRAAALDPTSKLAE---LGRGRALLGAGNPKEALL 102 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN--SP 173 E ++ +P ++YA+ + + + S++++ + Sbjct: 103 ALEIFLKAFPHHIEAR-------LTYARALSRLNRPA----EAAENFSQVIQLTPDPMPD 151 Query: 174 YVKGARFYVTVGRNQL 189 Y R + V N+L Sbjct: 152 YYLE-RARMLVLANRL 166 >gi|188584720|ref|YP_001916265.1| stage II sporulation protein E, protein serine/threonine phosphatase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349407|gb|ACB83677.1| stage II sporulation protein E, protein serine/threonine phosphatase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 833 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSK-AYEYFNQCSRDFPFAGVARKSLLMSA 101 D V D+ + +EKA+ LK ++ + A E + R + + ++ A Sbjct: 755 DGVFDMGDGEKWFEKAISNLKSKDPQEMAEELLEKVKRRYSYGDFPDDVTILIA 808 >gi|158285098|ref|XP_308135.4| AGAP003902-PA [Anopheles gambiae str. PEST] gi|157020735|gb|EAA03879.4| AGAP003902-PA [Anopheles gambiae str. PEST] Length = 585 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 11/72 (15%) Query: 63 KAVLFLKEQNFSKAYEYFNQCS-----RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 KA ++ + +++A + R++ + L++ Y G Y+QA Sbjct: 207 KAHANIQARKYTEAIQTLRSIEANTCLRNY------HQLLVLIGECYYHNGDYEQAYITL 260 Query: 118 EEYITQYPESKN 129 + P+SKN Sbjct: 261 KRAHAMQPQSKN 272 >gi|118591248|ref|ZP_01548647.1| hypothetical protein SIAM614_16517 [Stappia aggregata IAM 12614] gi|118436324|gb|EAV42966.1| hypothetical protein SIAM614_16517 [Stappia aggregata IAM 12614] Length = 583 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 15/43 (34%) Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 I +D + + Y + RY + + AR + + Sbjct: 268 QIELAYWDSIKSAESIAYFETYLNRYPDGQFADIARIRIDELK 310 >gi|85859714|ref|YP_461916.1| putative cytoplasmic protein [Syntrophus aciditrophicus SB] gi|85722805|gb|ABC77748.1| hypothetical cytosolic protein [Syntrophus aciditrophicus SB] Length = 152 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 29/82 (35%), Gaps = 7/82 (8%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 LL V + +A S ++ YPES YL G+S DV Sbjct: 70 LLGIGKVFFGQPDRPKAISYFKQITMAYPESFQAPEAVYLKGVSQYIEDHDVA------- 122 Query: 157 LMLQYMSRIVERYTNSPYVKGA 178 + + RY +S ++ A Sbjct: 123 NLFDIYECLKSRYPDSEWLMRA 144 >gi|325183179|emb|CCA17636.1| sporangia induced BardetBiedl syndrome 4 protein put [Albugo laibachii Nc14] Length = 909 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 64/196 (32%), Gaps = 42/196 (21%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + +Y KA++ E ++++ F S P K GK+ A Sbjct: 549 QSEYPLYVKALIARHEGKIEQSFQLFQAISCLNPGNRETIK---QIGRSFLLLGKHANAI 605 Query: 115 SLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + +E + K D+ V+Y +G Y + + +Q R Sbjct: 606 KVFKEVLNM---DKTEDWRVHYNIGTCYTYL--------KQFDNAIQSFQRA-------- 646 Query: 174 YVKGARFYVTVGRNQLAAKE---VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 N ++ + + + Y +G+Y AI +Q L D + + Sbjct: 647 -------------NAISRHDTTFLHLADVYETQGDYKNAINTYQEALEFSPD---NPKLL 690 Query: 231 ARLVEAYVALALMDEA 246 + L AY+ A Sbjct: 691 SGLGLAYLRTGDSFAA 706 >gi|323494243|ref|ZP_08099355.1| hypothetical protein VIBR0546_06797 [Vibrio brasiliensis LMG 20546] gi|323311406|gb|EGA64558.1| hypothetical protein VIBR0546_06797 [Vibrio brasiliensis LMG 20546] Length = 634 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 35/104 (33%), Gaps = 15/104 (14%) Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 TK L R VE S + LA YL + Y AI Sbjct: 288 GHTKQALAMAQRCVEV---SQESGNTDHMLVNCYEALATA-------YLAKKNYPEAISY 337 Query: 213 FQLVLANYSDAEHAE-----EAMARLVEAYVALALMDEAREVVS 251 VL D+E E + +++LVEAY A +A + Sbjct: 338 ANKVLDKLEDSESDEVVWEMDILSKLVEAYEATGDYQQALNYMK 381 >gi|320105829|ref|YP_004181419.1| tetratricopeptide repeat-containing protein [Terriglobus saanensis SP1PR4] gi|319924350|gb|ADV81425.1| Tetratricopeptide TPR_1 repeat-containing protein [Terriglobus saanensis SP1PR4] Length = 764 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 36/86 (41%), Gaps = 11/86 (12%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 +V + G+Y A S E+ P + ++ +Y +GM+Y+++ R Sbjct: 689 LGWVYFRKGQYDSARSYLEDAAKLDPNNASI---HYHLGMTYSRLNRKPD--------AQ 737 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVG 185 ++++ + N+ +K A + Sbjct: 738 VHLNKAITLAPNTQTMKDATQELQRL 763 >gi|300865339|ref|ZP_07110150.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506] gi|300336642|emb|CBN55300.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506] Length = 894 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 15/121 (12%), Positives = 40/121 (33%), Gaps = 8/121 (6%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60 M ++ + + ++ + LT+ ++A+ L +V + ++ Sbjct: 30 MLKIIAKFPWLSSKISFTISLALLTLCLTVALPTLA---TLPPIAQQSPTVEPISTPAQL 86 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM----SAFVQYSAGKYQQAASL 116 ++ F++A + Q + + A + M A G+ + A S Sbjct: 87 LDRGRQLYGAGRFAEAITLWEQVQKIYA-TEGATLNQAMTLNYLATAYQELGQLETAKSA 145 Query: 117 G 117 Sbjct: 146 I 146 >gi|296159240|ref|ZP_06842066.1| TPR repeat-containing protein [Burkholderia sp. Ch1-1] gi|295890499|gb|EFG70291.1| TPR repeat-containing protein [Burkholderia sp. Ch1-1] Length = 530 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 22/79 (27%), Gaps = 15/79 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVA----RKSLLMSAFVQY-------S 106 ++ L+ N+ A E F+ + A S L +A + Sbjct: 365 QQGRWNLEHGNYKAAAERFDDPMWKGRAQYLAGDYAAALETFSRLKTAQSYFYIGNTLAH 424 Query: 107 AGKYQQAASLGEEYITQYP 125 Y A + + P Sbjct: 425 LDDYAGAIKAYDNALQLQP 443 >gi|303278488|ref|XP_003058537.1| predicted protein [Micromonas pusilla CCMP1545] gi|226459697|gb|EEH56992.1| predicted protein [Micromonas pusilla CCMP1545] Length = 556 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 57/205 (27%), Gaps = 62/205 (30%) Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-SAFVQYSAGKYQQAASLGEEYI--- 121 FLK+++++ A + P + S L A+ + AG ++A Y+ Sbjct: 30 DFLKDRDYAGAIALLEFKRQQSP----SDVSNLEWLAYAYFHAGDPEKALDTY-RYLLRR 84 Query: 122 -----------------------------------TQYPE------SKNVDYVYYLVGMS 140 + K D M+ Sbjct: 85 ESDPDPTYHTFAAACLFYLGQYDEAEEEAKKGPKTKLHTRVLFHCAHKQNDEA---KLMT 141 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY-VTVGRNQLAAKEVEIGRY 199 Y Q + D DQ L L + + + + R LA V + Sbjct: 142 YHQQLTDSVEDQ----LSLASIHYLRSHF---QEATDIYKRLLLENREHLALN-VYVALC 193 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAE 224 Y K Y ++ + L +Y D+ Sbjct: 194 YCKLEYYDVSLEILNVYLQSYPDSP 218 >gi|254446689|ref|ZP_05060164.1| Tetratricopeptide repeat family [Verrucomicrobiae bacterium DG1235] gi|198256114|gb|EDY80423.1| Tetratricopeptide repeat family [Verrucomicrobiae bacterium DG1235] Length = 1065 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 11/93 (11%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 +E +FS A + P + ++ L+ A G Y A +L EE +Q + Sbjct: 379 EEGDFSGAIITLRNLVANRPESS---EAKLLLAEAYNRQGNYDAALALYEEIDSQAESTP 435 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 ++ Y +S +R D+ + + Sbjct: 436 DISY------LSGITQLRSRNRDE--ARRAFES 460 >gi|114762301|ref|ZP_01441759.1| Tetratricopeptide TPR_4 [Pelagibaca bermudensis HTCC2601] gi|114544919|gb|EAU47923.1| Tetratricopeptide TPR_4 [Roseovarius sp. HTCC2601] Length = 525 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 41/132 (31%), Gaps = 33/132 (25%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + +++ +A + F P L + Y G+Y A + + Sbjct: 332 QQGRIAFDRKDYERAADLF--VD---P---------LWRGYALYRDGQYDDAVLVLDR-- 375 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + GM+ I+ R + ++ + R + P GA Sbjct: 376 ------VETAQAASIQGMA---QIKG-----RHYRDGVRAFETALARDPDYP---GAAEN 418 Query: 182 VTVGRNQLAAKE 193 + + +A E Sbjct: 419 LETAKRIVAYVE 430 >gi|157426917|ref|NP_001098729.1| tetratricopeptide repeat protein 38 [Bos taurus] gi|296486863|gb|DAA28976.1| tetratricopeptide repeat domain 38 [Bos taurus] Length = 466 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 47/147 (31%), Gaps = 29/147 (19%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYEYFN 81 L+G D LD+ + +++ AV + NF KA E + Sbjct: 73 GLVLIGTGSSVRLDKELDAAVKTMVEISKTQPLTHREQLHVSAVETFAKGNFPKACELWE 132 Query: 82 QCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYY 135 Q +D P M A + G +Q YP + ++ Y Sbjct: 133 QILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---VYPFWTPDISLSSY 181 Query: 136 LVGMSYAQMIRDVPYDQ--RATKLMLQ 160 + G+ ++ YDQ + K L Sbjct: 182 VKGIYSFGLMETNLYDQAKKLAKEALA 208 >gi|71028630|ref|XP_763958.1| hypothetical protein [Theileria parva strain Muguga] gi|68350912|gb|EAN31675.1| hypothetical protein TP04_0323 [Theileria parva] Length = 882 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 24/71 (33%), Gaps = 7/71 (9%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI-- 121 + + N +A F +C RD + +++ A Y A + ++ Sbjct: 157 GEMSQETGNIDQAIYCFKKCQRDQE-GQINEQAVFALAICYIEKKDYDNA---AKRFLVL 212 Query: 122 -TQYPESKNVD 131 +P K + Sbjct: 213 FNLHPNDKLIA 223 >gi|125973651|ref|YP_001037561.1| TPR repeat-containing serine/threonin protein kinase [Clostridium thermocellum ATCC 27405] gi|125713876|gb|ABN52368.1| serine/threonine protein kinase with TPR repeats [Clostridium thermocellum ATCC 27405] Length = 486 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 52/155 (33%), Gaps = 32/155 (20%) Query: 44 RDVYLDSVTDVRYQ----REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 +D+ + V D+R + +Y K LF + + + +A + + + P Sbjct: 349 KDIDITQVEDIRQEALEDNLLYLKGKLFFELKKYEEAVKVYEKLVSRNP---DDLNYRYK 405 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSY-AQMIRDVPYDQRATKL 157 A + +++ + E+ +K + Y+ + + I+D K Sbjct: 406 LACAYGLNDEQEKSIEILED------INKKTPGMLYIVKKLGHAYDQIKDF-------KK 452 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 Y + + + T+ RN+L Sbjct: 453 ARAYFNYAIRLDPSD----------TIIRNRLEEY 477 >gi|312961301|ref|ZP_07775806.1| TPR domain protein [Pseudomonas fluorescens WH6] gi|311284959|gb|EFQ63535.1| TPR domain protein [Pseudomonas fluorescens WH6] Length = 579 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 25/73 (34%), Gaps = 15/73 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVAR----KSLLMSAFVQY-------S 106 ++ LK++ ++A E+F + A + A+ Y Sbjct: 358 QQGQYLLKKKRPAEAAEHFQDPQWQGVALYEAGNYAEAIKRFAEGNDAYSHYNRGNALAR 417 Query: 107 AGKYQQAASLGEE 119 +G+ + A E+ Sbjct: 418 SGELEAAVDAYEQ 430 >gi|301064231|ref|ZP_07204674.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] gi|300441676|gb|EFK05998.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] Length = 260 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 39/115 (33%), Gaps = 18/115 (15%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E Y+KA + S A +++ + P ++L + Y A E Sbjct: 136 ETYQKARALHHDGRLSDAAKWYEKVISVDPGH---VEALNNRGVLYLHEKDYSSAQRYFE 192 Query: 119 EYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + I P DYV YY + A R + L+Y+ + + + Sbjct: 193 KAIRLKP-----DYVDPYYNLACVSAATDR--------VRQSLRYLQKAISMDPD 234 >gi|288555804|ref|YP_003427739.1| rhomboid protein membrane-associated serine peptidase [Bacillus pseudofirmus OF4] gi|288546964|gb|ADC50847.1| rhomboid protein, putative membrane-associated serine peptidase [Bacillus pseudofirmus OF4] Length = 512 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 43/112 (38%), Gaps = 22/112 (19%) Query: 64 AVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 A +++E F +AY D P ++ + A+++Y G+Y++A + Sbjct: 405 AQEYMQEGRFDEAYPLIETVLEEENDNP------EAYFLMAYLEYEFGQYEKARESLLKT 458 Query: 121 ITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + P + +Y + ++++++ T+ + + + Sbjct: 459 VELRPSFHE----AHYNLALTHSRL--------GNTEEAIASLEEAIALAPE 498 >gi|156362617|ref|XP_001625872.1| predicted protein [Nematostella vectensis] gi|156212725|gb|EDO33772.1| predicted protein [Nematostella vectensis] Length = 442 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 69/229 (30%), Gaps = 64/229 (27%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + + V + D +E+ K + L +Q A YF Q + P + + Sbjct: 7 ANKEKKTVDPKNTYDRSIAKEL-NKGMALLDKQKVEDALRYFRQLVEEHPKSPL------ 59 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 Y ++ ++ DQR + + Sbjct: 60 ----------------------------------ALYGKAVALDKLA-----DQRRSNDL 80 Query: 159 LQYMSRIVERYTNSPYVKG--ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 LQ ++ Y P + A ++A + +GR R AA + V Sbjct: 81 LQ---ECIQNYRKIPELPDCPAELKKIALV-RMAGRLSFLGR---MRQA--AAA--LEKV 129 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREV-VSLIQERYPQGYWAR 264 + + + + L Y+ +A +V +++ P +A+ Sbjct: 130 ASLFP---SDVKVLKDLGVQYLMYGNNQDAEKVFKKVLKLN-PGSGFAK 174 >gi|82592706|gb|ABB84522.1| unknown [Myxococcus xanthus] Length = 596 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 25/72 (34%), Gaps = 14/72 (19%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSL--LMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + +A E N+C P ++ L + + ++ A + ++ P Sbjct: 526 RYRQAIEQLNKCLELEP-----TRAECHLYLGSAYANDNQPEKGAVHYKRFLELAPNH-- 578 Query: 130 VDYVYY--LVGM 139 YY + G+ Sbjct: 579 ---AYYERVKGL 587 >gi|56786614|gb|AAW29409.1| P-209 [Borrelia hermsii DAH] Length = 593 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 58/168 (34%), Gaps = 23/168 (13%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 Y + + + +K +N+ +A + ++ + +P + A + +A Sbjct: 25 YSQRLIKIGQEEIKNKNYLQAIKILSEAIQKYP---KVQNGYYFLAIAYRENNQLTEAEG 81 Query: 116 LGEEYITQYPESKNVDYVYY-LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + I ++DY Y +G + + L ++Y S V+ N Sbjct: 82 ALLDGIAI---GGDIDYKLYFELGNIMFK------RGEGYYNLAIKYYSNSVKNMPNYDK 132 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 N+ A VE G+ K +Y A + + + +YS Sbjct: 133 A---------LLNR-ANSYVEQGKINFKEKDYKNAWDSYSMAIHDYSQ 170 >gi|75907536|ref|YP_321832.1| heat shock protein DnaJ-like protein [Anabaena variabilis ATCC 29413] gi|75701261|gb|ABA20937.1| Heat shock protein DnaJ-like protein [Anabaena variabilis ATCC 29413] Length = 204 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 34/94 (36%), Gaps = 8/94 (8%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ----CSRDFPFAGVARKS 96 Q++++ + E+ + V +E+ + KA +Y C ++ Sbjct: 97 QATQEENREREPLTIPLAELLSEGVTACQEKRYPKAIKYLEDYCHICQDRH-TQAY-IQA 154 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + G+ Q+A +L + + +P V Sbjct: 155 QMWLIKAYQLGGQLQRAVALCQ-MLVNHP-HPQV 186 >gi|15594540|ref|NP_212329.1| cell division control protein 27, putative [Borrelia burgdorferi B31] gi|218249485|ref|YP_002374723.1| TPR domain protein [Borrelia burgdorferi ZS7] gi|223889253|ref|ZP_03623841.1| TPR domain protein [Borrelia burgdorferi 64b] gi|226321513|ref|ZP_03797039.1| TPR domain protein [Borrelia burgdorferi Bol26] gi|2688072|gb|AAC66569.1| cell division control protein 27, putative [Borrelia burgdorferi B31] gi|218164673|gb|ACK74734.1| TPR domain protein [Borrelia burgdorferi ZS7] gi|223885286|gb|EEF56388.1| TPR domain protein [Borrelia burgdorferi 64b] gi|226232702|gb|EEH31455.1| TPR domain protein [Borrelia burgdorferi Bol26] gi|312147863|gb|ADQ30522.1| TPR domain protein [Borrelia burgdorferi JD1] Length = 379 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 36/212 (16%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 K+ N+ KA Y+ +C P +L + Y++A + EEY+ PE+ Sbjct: 70 KKNNYDKAIVYYQKCLVKHPSNNY---ALFGLGDCYRNLDNYKKATDIWEEYLKYDPENI 126 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180 V V SY ++ + + Q +++E ++ Y + Sbjct: 127 T---VLTRVAASYRKL--------KNFQKSKQTYLKVMELIPDNDYALVGIGHLYYDFKE 175 Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 Y + L E+ IG Y K E+ I F+ L + A Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGIYFFKKALEI---SPSNFYA 232 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + L + Y EA + I E+ P+ Sbjct: 233 VFGLADCYRGNKEYKEALKYWLDIIEKDPKNN 264 >gi|54302895|ref|YP_132888.1| hypothetical protein PBPRB1216 [Photobacterium profundum SS9] gi|46916319|emb|CAG23088.1| conserved hypothetical protein [Photobacterium profundum SS9] Length = 388 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 8/77 (10%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYSAGKYQQAASLGEE 119 E A L L+E ++ KA Q R +++ + A Y + +A ++ Sbjct: 310 ELAQLLLQEGHYHKALTELEQVKRKD------KQADVELAKVRAYYKLENFDKAIIHAKQ 363 Query: 120 YITQYPESKNVDYVYYL 136 P S + +V YL Sbjct: 364 ANNITPSSASKSWVKYL 380 >gi|315186422|gb|EFU20182.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta thermophila DSM 6578] Length = 305 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 13/95 (13%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L + + + D+ + + +E +FS+A + Q Sbjct: 6 LVPAAILCLLVMTSCASSPRPDL----------AEAYFSLGNAYYEEGDFSRAVGAYTQA 55 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 R F+ + A G+Y +A +L E Sbjct: 56 LR---FSPHTPRIEYNLARTYIRTGEYDRAEALLE 87 >gi|299116794|emb|CBN74907.1| kinesin light chain-like protein [Ectocarpus siliculosus] Length = 874 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 72/231 (31%), Gaps = 29/231 (12%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN---QC--SRDFPFAGVARKSLLMSAFVQ 104 + D+ +++ +AV ++ + +A P +L A + Sbjct: 595 DLDDLAVAKDLCNQAVGLSQQGKYEEAEPLSERSLAICEKSLGPDHPDVATALNSRAILL 654 Query: 105 YSAGKYQQAASLGEEYI-----TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + GKY++A L E + + P +V G + + L Sbjct: 655 MNQGKYEEAGPLLERSLAIREKSLGPNHPDVATALNNRGELLMSQGKYEEAGP-LVERAL 713 Query: 160 QYMSRIVERYTNSPYVKGA-RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + + P V A + NQ A + G+ Y++ G R ++L Sbjct: 714 AIREKSLG--PIHPLVATALNSRANLLMNQ-ANLLMNQGK-YMETG---PLFERSLVILE 766 Query: 219 NY--SDAEHAEEAMARLVEAYVALALMDEA----REVVSL----IQERYPQ 259 Y D H + + V +EA +++ + +P Sbjct: 767 KYLGPDHPHVATTLNYRANSLVDQGKYEEAGPLFERSLAIREKSLGPEHPD 817 >gi|168025779|ref|XP_001765411.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683464|gb|EDQ69874.1| predicted protein [Physcomitrella patens subsp. patens] Length = 461 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 59/211 (27%), Gaps = 45/211 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + ++ +A F++ P A +L S G+Y++AA+ E + Sbjct: 200 NRGNSRSRQGKMEEALADFDRSIELAP---YAADPVLNRGVTLESLGRYEEAAADYEAVL 256 Query: 122 TQYPESKNV--------------DYVY--YLVGM----------SYAQMIRDVPYDQRAT 155 P D Y + + +I Y Sbjct: 257 LAQPNDPAAWNNLGNVKAASGLWDEALSNYRRAVQIAPEFSFAAANYALIL---YQVGKE 313 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY----YLKR------GE 205 + ++ +Y P V+ A + A E GR Y R + Sbjct: 314 NEAFKQFRSLLRKYPEFPDVRAALAVTLYAQGLTAEAETNWGRVEDLRYRDRNWVRNTRK 373 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 + R L + D + +A + ++ Sbjct: 374 WPP---RLVKALEGFLDVKAVAKASTLMTKS 401 >gi|89889650|ref|ZP_01201161.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7] gi|89517923|gb|EAS20579.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7] Length = 459 Score = 37.0 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 50/159 (31%), Gaps = 27/159 (16%) Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 E P ++ + ++ G + + +++ P S Y Sbjct: 200 IESLEAEIERNPTN---EQAYINLIYMHGRNGDKEALFEVAQDFERNVPNSDAAHLALYK 256 Query: 137 V---------GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 + G++ + I R TK ++ + + S VT + Sbjct: 257 IFIENDRIDDGVASLEKILTSDKIDRETK--MKVLQDFISM---SDGRVDLENAVTQAID 311 Query: 188 QL--------AAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 L A + + G YYLK+ + V AI ++ L Sbjct: 312 WLSDDVEDPNAYRAM--GDYYLKKNDAVQAIAFYEKGLE 348 >gi|240102220|ref|YP_002958528.1| hypothetical protein TGAM_0162 [Thermococcus gammatolerans EJ3] gi|239909773|gb|ACS32664.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3] Length = 340 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEH-AEEAMARLVEAYVALALMDEA-REVVSL 252 EIG Y + +AI ++ V+ D A+ L +AY + ++A L Sbjct: 59 EIGHVYAHLDDVESAIELYRRVVERKKDDPEEYATALYYLADAYEHFGMPEKAIETYQKL 118 Query: 253 IQE 255 ++ Sbjct: 119 LEH 121 >gi|256820362|ref|YP_003141641.1| hypothetical protein Coch_1535 [Capnocytophaga ochracea DSM 7271] gi|315223479|ref|ZP_07865336.1| TPR repeat-containing protein [Capnocytophaga ochracea F0287] gi|256581945|gb|ACU93080.1| Tetratricopeptide TPR_2 repeat protein [Capnocytophaga ochracea DSM 7271] gi|314946652|gb|EFS98643.1| TPR repeat-containing protein [Capnocytophaga ochracea F0287] Length = 251 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 8/70 (11%), Positives = 23/70 (32%), Gaps = 3/70 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +EKA + + + A + + + + A Y ++ E+ Sbjct: 26 FEKATQYYDQGEYQNAIDQYKSILKS---GKESSALYYNLANTYYKLNHVPESIYYYEKA 82 Query: 121 ITQYPESKNV 130 + P+++ Sbjct: 83 LQLNPKNQQA 92 >gi|158335983|ref|YP_001517157.1| TPR repeat-containing serine/threonine protein kinase [Acaryochloris marina MBIC11017] gi|158306224|gb|ABW27841.1| serine/threonine kinase with TPR repeats [Acaryochloris marina MBIC11017] Length = 810 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 17/146 (11%), Positives = 41/146 (28%), Gaps = 23/146 (15%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + Y + N+ A E F + D+ ++ L GKY +A Sbjct: 341 PQWHYFWGQQAAQSGNWQSATENFEQALELKADY------TEAALKLGETYAEIGKYPEA 394 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + + + Q P++ + ++ + + + + + Sbjct: 395 IAQFDTLLKQQPKTAAA-----------FRERGEIRFATGGYQAAISDYNEALTLDPKD- 442 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRY 199 + + +L E I Y Sbjct: 443 --AETYNHRGDAQVELGKYEAAIADY 466 >gi|94969216|ref|YP_591264.1| hypothetical protein Acid345_2189 [Candidatus Koribacter versatilis Ellin345] gi|94551266|gb|ABF41190.1| hypothetical protein Acid345_2189 [Candidatus Koribacter versatilis Ellin345] Length = 216 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 15/86 (17%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP------FAGVARKSLLMSAF 102 ++ + + E Y+ A+ + ++ A E+F++ + P + ++L Sbjct: 104 ENASKFKTPEEHYDFAISLVNMGDYITAREHFDKLLKTHPTKDFIWYGA----AVLECLT 159 Query: 103 VQYSAGKYQQAASLGEEYITQYPESK 128 Y +A E I P ++ Sbjct: 160 SHY-----PEALRALAESIRLNPSNR 180 >gi|14270308|emb|CAC39452.1| immunophilin FKBP-52 [Mus musculus] Length = 453 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 18/146 (12%), Positives = 43/146 (29%), Gaps = 30/146 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARK-------SLLMSAFVQYSAGK 109 E+ + KE + +A + + + +K S L A Sbjct: 270 ERGTAYFKEGKYKQALLQYKKIVSWLEYESSFSGEEMQKVHALRLASHLNLAMCHLKLQA 329 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + D ++++ Y Sbjct: 330 FSAAIESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 378 Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191 ++ A+ + V R QLA Sbjct: 379 PSNK---AAKTQLAVCQQRTRRQLAR 401 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 35/84 (41%), Gaps = 2/84 (2%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFS 74 +++ L ++A+C L ++ + ++ D ++ ++ + L +F Sbjct: 306 MQKVHALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFD 365 Query: 75 KAYEYFNQCSRDFPFAGVARKSLL 98 A F + + +P + A K+ L Sbjct: 366 LARADFQKVLQLYP-SNKAAKTQL 388 >gi|322791824|gb|EFZ16038.1| hypothetical protein SINV_06722 [Solenopsis invicta] Length = 245 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 11/83 (13%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119 +AV E+++ KA +++ + P A A++S + K Sbjct: 123 SEAVSAFVEKDYEKAIQFYTEAIVLNPQAALLYAKRSQVFLI-----LNKPNACIRDCNR 177 Query: 120 YITQYPE----SKNVDYVYYLVG 138 I P+ K YYL+G Sbjct: 178 AIELNPDSAAAHKFRGRAYYLLG 200 >gi|300869756|ref|YP_003784627.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] gi|300687455|gb|ADK30126.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] Length = 933 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 24/78 (30%), Gaps = 12/78 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 Y + +++ + A Y+ + + F A Y Y +A Sbjct: 70 YYYIGACYFQDKQYENAINYYKLAFDINDSYSFCN-------NIANSYYQLKNYDEALIW 122 Query: 117 GEEYI-TQY-PESKNVDY 132 I Y P + ++Y Sbjct: 123 YNRAIERLYSPYNAKLNY 140 >gi|295094334|emb|CBK83425.1| hypothetical protein [Coprococcus sp. ART55/1] Length = 563 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 9/68 (13%), Positives = 29/68 (42%), Gaps = 17/68 (25%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP---------FAGVARKSLLMSAFVQYSAGKYQ 111 Y+KA + K +++ A + +++ +D+ + + ++ Y +Y+ Sbjct: 344 YKKAEQYYKNKDYENAIKSYDKVDKDYKDCVAEKDKCYQALGAQA--------YKDKEYK 395 Query: 112 QAASLGEE 119 ++ E+ Sbjct: 396 KSVDYYEK 403 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 30/217 (13%), Positives = 60/217 (27%), Gaps = 43/217 (19%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + + + + Y + + ++ A + FN + + Sbjct: 212 SSDGDEESFSSDDAFDKAYQCYYNAGMDQMNAASYDAAIDAFNNA------GSY-KDASD 264 Query: 99 MSAFVQYS-------AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151 Y A KY A S+ I +Y +S+ L+ Y ++ D Sbjct: 265 KVIECTYKKAEALITAKKYDDAISIL-STIEEYSDSQT------LLAKCYYNKASEL-LD 316 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Y S + + + + A + Y K +Y AI Sbjct: 317 GGKYDDAYD-------MYMKSEF-DDYKNKASECTYKKAEQ-------YYKNKDYENAIK 361 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 + V +Y D ++ + Y AL + Sbjct: 362 SYDKVDKDYKDCVAEKD------KCYQALGAQAYKDK 392 >gi|290994703|ref|XP_002679971.1| predicted protein [Naegleria gruberi] gi|284093590|gb|EFC47227.1| predicted protein [Naegleria gruberi] Length = 1064 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 65/208 (31%), Gaps = 37/208 (17%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A + ++ + +A F QC P L Y +++A E + Sbjct: 192 ACIKYHKKQYKEALSEFEQCLLMNPQGP--ADIRLGMGLCHYQLDNFERAKQCFERVLQL 249 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML-QYMSRIVERYT-NSPYVKGARFY 181 P + + + Y +I D+ + + Y+ R NS Sbjct: 250 DPNN--------VSALIYLAIIDLNSRDEELLQNAVKNYLKRAYSLDPGNSQ-------- 293 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE---EAMARLVEAYV 238 N L ++ +R +LV A + + + + E+ + AY Sbjct: 294 ---VLNLLGNH------FFFRRE----VDKTEELVFAAFHNTKSPKIKAESCYNMARAYH 340 Query: 239 ALALMDEA-REVVSLIQERYPQGYWARY 265 D A + ++ +P+ ARY Sbjct: 341 HKKDYDSAFKYYYRIVSRLWPEYTLARY 368 >gi|149176413|ref|ZP_01855027.1| putative methyltransferase [Planctomyces maris DSM 8797] gi|148844765|gb|EDL59114.1| putative methyltransferase [Planctomyces maris DSM 8797] Length = 1398 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 37/112 (33%), Gaps = 6/112 (5%) Query: 30 IAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 +A+ E+Q + D Y ++ Y + L L+ +A E Q R P Sbjct: 112 LAITLANSGEKQRAIDAYRKALELKPGYPDALINLGNLLLETDEVEEAIEICKQVVRLAP 171 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV--DYVYYLVG 138 + A A + A + + + P+ + +Y +L Sbjct: 172 ---DLHTAQFNLANALAKAEDTESADAAYQRALQLAPDHLDTMKNYAVFLSA 220 >gi|126658024|ref|ZP_01729176.1| hypothetical protein CY0110_05397 [Cyanothece sp. CCY0110] gi|126620662|gb|EAZ91379.1| hypothetical protein CY0110_05397 [Cyanothece sp. CCY0110] Length = 214 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 25/199 (12%), Positives = 61/199 (30%), Gaps = 46/199 (23%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--- 88 + ++G QSS SV V E+ ++ + ++ N+ A FNQ P Sbjct: 1 MSLIIGCNNQSSSVPIESSVLTVDTV-EMVQQGIEKSRQGNYEAAVNDFNQVIAQNPQDI 59 Query: 89 ---------FAGVAR-------------------KSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ + + ++ + V G+ ++A + E+ Sbjct: 60 NAYFNRGFAYSSLGQFEQALADFTKVLKLDPQMVQAYVNRGNVYLQLGEDKKAIADYEKA 119 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + P + +G+++ + +L ++ V Y + Sbjct: 120 LKINPND---AFAQNNLGLAHLNA--------GSPELAEIDFTQAVTIDP--MYGEAYYN 166 Query: 181 YVTVGRNQLAAKEVEIGRY 199 + L + I + Sbjct: 167 RGLALID-LGETKKAIADF 184 >gi|124004229|ref|ZP_01689075.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC 23134] gi|123990299|gb|EAY29798.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC 23134] Length = 483 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 10/83 (12%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 K + A + FNQ P + +L++ A + KY +A ++ Sbjct: 272 KGATHSDNAEYKSAIKIFNQALTLEPQNKI---ALILHANTAFKMKKYDKAIENYDQIQA 328 Query: 123 QYPESKNVDYV--YYLVGMSYAQ 143 + DY YY G +Y + Sbjct: 329 L-----DADYAYSYYGKGNAYKE 346 >gi|11024656|ref|NP_067592.1| synaptonemal complex protein SC65 [Rattus norvegicus] gi|57192|emb|CAA46449.1| Sc65 synaptonemal complex protein [Rattus norvegicus] gi|444751|prf||1908200A synaptonemal complex protein Length = 431 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVD-YVYYLVGM 139 + + A + ++A + ++ + P+ + Y+ Y GM Sbjct: 123 YAHFKANRLEKAVAAAYTFLQRNPKHELTAKYLNYYRGM 161 >gi|332883325|gb|EGK03608.1| hypothetical protein HMPREF9456_01675 [Dysgonomonas mossii DSM 22836] Length = 1200 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 50/136 (36%), Gaps = 17/136 (12%) Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 ++ Y +G+ Y ++D+ + + + R+ N+P ++ + + + +L Sbjct: 604 IEDALYKMGLIYKDKLQDMDL-------AIDAFNTNIHRFPNTPNLEEIYYQLFLIYMRL 656 Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLA-----NYSDAEHAEEAMARLVEAYVALALMD 244 + Y K A+ V N+ + ++++ EAY A D Sbjct: 657 GDNNMM-ATYRSKLMNEFASGKYAGPVSQPDYEWNFRNMASLQDSLYN--EAYKAYQQAD 713 Query: 245 --EAREVVSLIQERYP 258 R + + +YP Sbjct: 714 VETVRRNYAAMNTKYP 729 >gi|327404353|ref|YP_004345191.1| hypothetical protein Fluta_2367 [Fluviicola taffensis DSM 16823] gi|327319861|gb|AEA44353.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola taffensis DSM 16823] Length = 322 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 25/187 (13%), Positives = 56/187 (29%), Gaps = 40/187 (21%) Query: 69 KEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 K++N+SKA +F + +++ F YS G +A + + P Sbjct: 164 KQKNYSKAITHFQTLISKDSLY------KEAYNNLGFCYYSLGDNIKALKAINKALEIDP 217 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 V K L+ +++ + Y Sbjct: 218 RYPEA-----------YDKRSQVWMATGDYKKALEDLNKALSLYP-------------FL 253 Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245 L + + YL+ +Y A+ L+L A+ + + + Y + + Sbjct: 254 STSLNNRALI----YLEMKQYSDALGDMNLLL---QTAKPTADLLIIRAQIYKEMGNFEL 306 Query: 246 AREVVSL 252 + + + Sbjct: 307 MEQDLKI 313 >gi|254417606|ref|ZP_05031343.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] gi|196175628|gb|EDX70655.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] Length = 909 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 62/179 (34%), Gaps = 30/179 (16%) Query: 71 QNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 + + +A F+Q P + + +++ + +Y++A + ++ I P+ Sbjct: 272 ERYEEAIASFDQAITLNPDYYKAWNGRGIVLI-----NLKRYEEAIASYDQAIALNPD-- 324 Query: 129 NVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187 DY + G++ + R + + + + + Y A V Sbjct: 325 --DYQAWNNRGVALGNLER--------YEEAIASYDQAIALNPD-DY--QAWNNRGVALG 371 Query: 188 QLAAKEVEIGRY----YLKRGEYVAAIPRFQLV--LANYSDAEH-AEEAMARLVEAYVA 239 L E I Y L Y A R + L Y +A ++A+A + Y A Sbjct: 372 NLERYEEAIASYDQAIALNPDNYEAWNNRGNTLRNLERYEEAIASYDKALALNPDNYEA 430 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 9/113 (7%), Positives = 41/113 (36%), Gaps = 18/113 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + + + + +A ++Q P + ++ + +Y++A + + Sbjct: 670 FMRGIALRNLEKYEEAIASYDQAIALNPDFY-----QAWFNRGNTLRNLERYEEAIASYD 724 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 + I P+ + +++ G++ + R + + ++ + + Sbjct: 725 QAIALNPDDSS---AWFMRGIALGNLER--------YEEAIASFNQAIALTPD 766 >gi|83945716|ref|ZP_00958061.1| TPR domain protein [Oceanicaulis alexandrii HTCC2633] gi|83850917|gb|EAP88777.1| TPR domain protein [Oceanicaulis alexandrii HTCC2633] Length = 685 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 48/128 (37%), Gaps = 14/128 (10%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 G + ++ +Y + + ++ A+ ++ ++++A E F++ P Sbjct: 236 FGKALEEAQTLYDRDPDNPVFISQL---AIERMQTGDYARAVELFDRVLERAPGDP---- 288 Query: 96 SLLMS-AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 + L S + G+ ++A + + P + +Y G++ + R D+RA Sbjct: 289 ATLTSRGHALKTWGRSEEAIASYQAACQSDPAHGD---AWY--GLANLKTYR-FDADERA 342 Query: 155 TKLMLQYM 162 Sbjct: 343 IMQAEDSR 350 >gi|114563847|ref|YP_751361.1| TPR repeat-containing protein [Shewanella frigidimarina NCIMB 400] gi|114335140|gb|ABI72522.1| TPR repeat-containing protein [Shewanella frigidimarina NCIMB 400] Length = 701 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 47/146 (32%), Gaps = 25/146 (17%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 L + S+ + + +S+ + ++ ++A ++ FS+A E F Sbjct: 322 LTLMLSPSLLLATAMTLSLANSQPAQASVWQGLWKTKD--QQAQSAFEQGEFSQAAETFE 379 Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 + A QY AG YQQA E+ + Y G + Sbjct: 380 N-----------PQWQ---ASAQYKAGNYQQALEGFEQ--------DSSAQGLYNQGNAL 417 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVE 167 + D + + + S+ E Sbjct: 418 M-QLEDYQEAIKRYQQAIAAQSQFTE 442 >gi|326435520|gb|EGD81090.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818] Length = 819 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 65/232 (28%), Gaps = 55/232 (23%) Query: 60 VYEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +Y + + + +A Y+++ P G Y Sbjct: 314 LYNNLGNAYFSKGAYDRAIHYYDKALAIKVETLGEKHPSTAETYN---NLGNAYARKGDY 370 Query: 111 QQAASLGEEYI-----TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM-SR 164 +A L E+ + T + + Y +G +YA D + L Sbjct: 371 DKAIELYEKALAIKVETLGEKHPSTAETYNNLGSAYASK-GDYDRAIAFYEKDLAITVET 429 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL------- 217 + E++ ++ N L G Y +G Y AI ++ L Sbjct: 430 LGEKHPSTADT----------YNNL-------GNAYYSKGAYDRAIHFYEKALAITAEAL 472 Query: 218 -ANYSDAEHAEEAMARLVEAYVALALMDEA----REVVS----LIQERYPQG 260 + + AY D A + ++ ++ +++P Sbjct: 473 GEKHPSTAQTYNNLGI---AYKNKGEYDRAIAFYEQALAITVEVLGKKHPST 521 Score = 35.5 bits (81), Expect = 7.2, Method: Composition-based stats. Identities = 37/242 (15%), Positives = 70/242 (28%), Gaps = 69/242 (28%) Query: 55 RYQREVYEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQY 105 E Y + ++ ++ KA E + + P Sbjct: 351 PSTAETYNNLGNAYARKGDYDKAIELYEKALAIKVETLGEKHPSTAETYN---NLGSAYA 407 Query: 106 SAGKYQQAASLGEEYITQ--------YPESKNVDY-----VYYLVGMSYAQMIRDVPYDQ 152 S G Y +A + E+ + +P + + Y YY G +Y + I Sbjct: 408 SKGDYDRAIAFYEKDLAITVETLGEKHPSTADT-YNNLGNAYYSKG-AYDRAIHFYEKAL 465 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212 T L E++ ++ A+ Y + I Y +GEY AI Sbjct: 466 AITAEALG------EKHPST-----AQTY----------NNLGIA--YKNKGEYDRAIAF 502 Query: 213 FQLVL--------ANYSDAEHAEEAMARLVEAYVALALMDEA----REVVSL----IQER 256 ++ L + L AY +A + ++ + E+ Sbjct: 503 YEQALAITVEVLGKKHPSTAQTY---NNLGNAYKNKGDYGKAIECYEKARAVYVEALGEK 559 Query: 257 YP 258 +P Sbjct: 560 HP 561 >gi|322495645|emb|CBZ30951.1| MAP kinase kinase-like protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1343 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 15/139 (10%), Positives = 44/139 (31%), Gaps = 33/139 (23%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119 E+ K + +A Y+ Q P + +S F ++ +++++A+ + Sbjct: 49 EEGNEAFKAGRYHEAIRYYTQAIEVDPDSEFLYTNRS-----FAYFNIKEFEKSAADAAK 103 Query: 120 -------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + + Y +G++ + D + + + S Sbjct: 104 AVEINANFFKGH----------YRLGLAQMSL-NDFGHAMESLRKAWALA-------P-S 144 Query: 173 PYVKGARFYVTVGRNQLAA 191 + R + +++A Sbjct: 145 ENKEAIRVAMAKCESKMAR 163 >gi|295689557|ref|YP_003593250.1| peptidase M48 Ste24p [Caulobacter segnis ATCC 21756] gi|295431460|gb|ADG10632.1| peptidase M48 Ste24p [Caulobacter segnis ATCC 21756] Length = 478 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 11/89 (12%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 N A + + FP A AR A Y ++ L + I +P++ Sbjct: 272 NPQVALMKYKETDASFP-ARYAR------AIAYYQMKDPDRSLKLIDALIADHPDNP--- 321 Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 Y++ L G + R + + + +Q Sbjct: 322 YLWELKGQVLFEFNR-ITLAEEPQRKSVQ 349 >gi|193212037|ref|YP_001997990.1| TPR repeat-containing protein [Chlorobaculum parvum NCIB 8327] gi|193085514|gb|ACF10790.1| Tetratricopeptide TPR_2 repeat protein [Chlorobaculum parvum NCIB 8327] Length = 201 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 52/163 (31%), Gaps = 37/163 (22%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 ++ L ++ +A + I P +D Y +G +Y Sbjct: 49 RAYLNLGREYARQQRFDEAIESYQRAIKIEPG---LDEAYSGLGAAYFNKE--------- 96 Query: 155 TKLMLQYMSRIVERYTNSPYVKG---ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Y + V + + ++G Y + Y A+ Sbjct: 97 ------------------EYAAALPWMQKRVGIAPDDSLRH-FDLGNVYYQLKRYDEALD 137 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +Q + N + +EA + Y+ +DEAR++++ +Q Sbjct: 138 SYQKAIDN---SYSFQEAYYTMGMCYLQQGKIDEARKILTWLQ 177 >gi|94967944|ref|YP_589992.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94549994|gb|ABF39918.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 324 Score = 37.0 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 28/91 (30%), Gaps = 16/91 (17%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-----MSAFVQYSAGKYQ 111 ++V A L + +A + + +S + Y G Y Sbjct: 14 PQKVIADAHRQLDHGQYDEAIVQLQKLQQ--------EQSAIEGLVREIGIAYYKKGDYL 65 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 A ++ +++ L+G+SY Sbjct: 66 SAIRYLKQATK---QNEKDSEAVQLLGLSYY 93 >gi|332307031|ref|YP_004434882.1| Tetratricopeptide TPR_1 repeat-containing protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174360|gb|AEE23614.1| Tetratricopeptide TPR_1 repeat-containing protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 660 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 11/87 (12%), Positives = 27/87 (31%), Gaps = 21/87 (24%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSA------------- 107 ++ + +N++ A E+F A K+ +A + Sbjct: 365 QQGQQAFQAENYNAAAEHFEDPMWR---GAAAYKAQDYDAALAAFQQAKGAQARYNEGNT 421 Query: 108 ----GKYQQAASLGEEYITQYPESKNV 130 GK +A ++ + P ++ Sbjct: 422 LAQLGKLDEAIEAYDKALEIDPAHEDA 448 >gi|325852031|ref|ZP_08171114.1| tetratricopeptide repeat protein [Prevotella denticola CRIS 18C-A] gi|325484587|gb|EGC87503.1| tetratricopeptide repeat protein [Prevotella denticola CRIS 18C-A] Length = 1122 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 20/50 (40%) Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + V +Y D E ++ L Y+ A V+ + +YP+ W Sbjct: 617 LRRVSDDYPDYEQMDDVYYHLYLLYMRKGDQQMADSYVTRLSRKYPKSKW 666 >gi|322700636|gb|EFY92390.1| NADPH oxidase regulator NoxR [Metarhizium acridum CQMa 102] Length = 533 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 13/102 (12%), Positives = 31/102 (30%), Gaps = 18/102 (17%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A+ F A F++ + K L + + G++++A + I Sbjct: 12 AALARYDNNEFDDALGEFDKIAD-------TSKILFNMGVIHATLGEHEKAVECYQRAIR 64 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + + Y+ G+S + + L + Sbjct: 65 L---DQYLAVAYFQQGVSNFLL--------GDFEEALANFND 95 >gi|301759847|ref|XP_002915760.1| PREDICTED: aspartyl/asparaginyl beta-hydroxylase-like [Ailuropoda melanoleuca] Length = 747 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 23/79 (29%), Gaps = 17/79 (21%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 + + L +V +Y SP + + + LA K +R V Sbjct: 341 RKRGKIEEALSAFQELVRKYPQSPRARYGKA---QCEDDLAEK---------RRSNEV-- 386 Query: 210 IPRFQLVLANYSDAEHAEE 228 + + Y + + Sbjct: 387 ---LRGAIETYQEVASLPD 402 >gi|198434475|ref|XP_002126132.1| PREDICTED: similar to CG6915 CG6915-PA [Ciona intestinalis] Length = 1834 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 56/159 (35%), Gaps = 21/159 (13%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQR 153 ++L + +S G + A E I+ + + +V + + D Sbjct: 604 RALYNLGYAYFSLGDHASAVDCYNECISVASQCNDDVTMA---RAFCNLGLAK---KDLG 657 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213 L++ + +E S ++ AR N IG Y +R E A+ + Sbjct: 658 DLDAALEFQKKFLE---TSLEIRSARGVFKALGN--------IGDLYFERKELDDAVKFY 706 Query: 214 QLVLANYSDAEH---AEEAMARLVEAYVALALMDEAREV 249 Q L + ++ +A A L A + ++A E+ Sbjct: 707 QQQLETAQENKNPVLTAQACASLAIALRLMGEKEKAVEI 745 >gi|195112913|ref|XP_002001016.1| GI10560 [Drosophila mojavensis] gi|193917610|gb|EDW16477.1| GI10560 [Drosophila mojavensis] Length = 450 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +A+ +LK N+ A + C R P K+LL A Y+ G +++ + + + Sbjct: 241 NRAISYLKLNNYLLAIKDCEACLRLEPDN---VKALLRLADANYNQGYRRESYGIYQRVL 297 Query: 122 TQYPESKNV 130 P + + Sbjct: 298 ELEPNNASA 306 Score = 35.9 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 45/145 (31%), Gaps = 13/145 (8%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 L V +Y + + + K + + A + + P A +S A Sbjct: 190 AKLSQVEREQYAEKFRLRGNEYFKAKEYENAVREYTRAITFDP--AQAARSYNNRAISYL 247 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 Y A E + P++ + + + D Y+Q + R+ Sbjct: 248 KLNNYLLAIKDCEACLRLEPDN--------VKAL---LRLADANYNQGYRRESYGIYQRV 296 Query: 166 VERYTNSPYVKGARFYVTVGRNQLA 190 +E N+ K + + +LA Sbjct: 297 LELEPNNASAKKSLEQLRQQVGELA 321 >gi|159467379|ref|XP_001691869.1| HSP70-HSP90 organizing protein [Chlamydomonas reinhardtii] gi|158278596|gb|EDP04359.1| HSP70-HSP90 organizing protein [Chlamydomonas reinhardtii] Length = 567 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 42/131 (32%), Gaps = 13/131 (9%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 EK KEQ + +A + + + + P A K A G Y + ++ Sbjct: 378 EKGNTAFKEQRYPEAVQAYQEALKRGPPAVNPEAYKLYSNLAACYTKLGAYPEGVKAADK 437 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I P D+ G + Y + ++ ++ +E +S ++ Sbjct: 438 CIELKP-----DFA---KG---YSRKGTLQYFMKEYDKAIETYNKGLELEPDSTELQEGL 486 Query: 180 FYVTVGRNQLA 190 ++ A Sbjct: 487 QRAVEAISRFA 497 >gi|156839553|ref|XP_001643466.1| hypothetical protein Kpol_1006p4 [Vanderwaltozyma polyspora DSM 70294] gi|156114078|gb|EDO15608.1| hypothetical protein Kpol_1006p4 [Vanderwaltozyma polyspora DSM 70294] Length = 732 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 41/132 (31%), Gaps = 20/132 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGE 118 Y + + +++ AYE F Q + Y +Y+ A Sbjct: 290 YHLGRIHMIRSDYNAAYEAFQQAVNRDARNPIFWC-----SIGVLYYQIYQYRDALDAYT 344 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 I P + V+Y +G + + + D L + ++ +++ Sbjct: 345 RAIRLNP---YISEVWYDLG-TLYETCNNQLTD------ALDAYKQAARLEPDNTHIRE- 393 Query: 179 RFYVTVGRNQLA 190 + NQL+ Sbjct: 394 --RLDALTNQLS 403 >gi|217972769|ref|YP_002357520.1| tetratricopeptide repeat-containing protein [Shewanella baltica OS223] gi|217497904|gb|ACK46097.1| Tetratricopeptide TPR_2 repeat protein [Shewanella baltica OS223] Length = 692 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 14/58 (24%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++A+ + Q+++ A + F QY AG Y+QA E+ Sbjct: 359 QQAMQAYQSQDYANAAKQFESPQWR--------------GSAQYKAGDYEQALKTFEQ 402 Score = 35.5 bits (81), Expect = 8.4, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 22/65 (33%), Gaps = 7/65 (10%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRD--FPFAGVARKS 96 + + L + + +Y + ++ KA E + + FP A K+ Sbjct: 389 KAGDYEQALKTFEQDSSAQGLYNQGNALMQLGKPDKAKERYQAALEKQADFP----AAKA 444 Query: 97 LLMSA 101 L A Sbjct: 445 NLELA 449 >gi|158521254|ref|YP_001529124.1| hypothetical protein Dole_1241 [Desulfococcus oleovorans Hxd3] gi|158510080|gb|ABW67047.1| protein of unknown function DUF181 [Desulfococcus oleovorans Hxd3] Length = 575 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 9/57 (15%), Positives = 21/57 (36%), Gaps = 18/57 (31%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV-----------------YYLVGM 139 F + ++++A ++ I+ P S +DY YY++ + Sbjct: 501 MGFCHFKRQEHEKAIDCFKKVISLNPGS-AIDYANIGVNYRALGNMEKAVQYYMMAL 556 >gi|221134893|ref|ZP_03561196.1| putative unknown membrane associated protein [Glaciecola sp. HTCC2999] Length = 438 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 1/71 (1%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 + + + + Q ++ A L L + N+ + + + V K L + A Sbjct: 116 KKVIEEPGIPESFEQSTLFTLAQLSLMQGNYKDSIHFLERWEYLNV-GDVPPKHLFIKAQ 174 Query: 103 VQYSAGKYQQA 113 Y +Y+QA Sbjct: 175 AYYQDKQYEQA 185 >gi|109094549|ref|XP_001110757.1| PREDICTED: tetratricopeptide repeat protein 38-like isoform 1 [Macaca mulatta] Length = 439 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 47/148 (31%), Gaps = 29/148 (19%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYEYF 80 L+G D LD + +++ AV + NF KA E + Sbjct: 72 TGLVLIGTGSSVKLDKELDLAVKTMVEISRTQPLTRREQLHVSAVETFAKGNFLKASELW 131 Query: 81 NQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVY 134 Q RD P M A V + G +Q YP + ++ Sbjct: 132 EQILRDHPTD--------MLALKFSHDVYFYLGCQEQMRDSVAR---VYPFWTPDIPLSS 180 Query: 135 YLVGMSYAQMIRDVPYDQ--RATKLMLQ 160 Y+ G+ ++ YD+ + K L Sbjct: 181 YVKGIYSFGLMETNFYDRAEKLAKEALS 208 >gi|90021388|ref|YP_527215.1| TPR domain-containing protein [Saccharophagus degradans 2-40] gi|89950988|gb|ABD81003.1| TPR repeat [Saccharophagus degradans 2-40] Length = 658 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 9/64 (14%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 KAV K++N+ +A E FNQ + + + L KY +A + +E ++ Sbjct: 385 KAVSEYKQKNYEQAAELFNQNTATDLYNRANALTQLE---------KYDEAIAAYDEALS 435 Query: 123 QYPE 126 Q P Sbjct: 436 QNPN 439 >gi|332140757|ref|YP_004426495.1| TPR domain protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327550779|gb|AEA97497.1| TPR domain protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 667 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 37/123 (30%), Gaps = 31/123 (25%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A+ + + A F+ L A Y +G+Y++A + E I Sbjct: 389 QEALNSYQRGKYKDAVSQFDD--------------KLWKASSLYKSGEYERALAAFEN-I 433 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P Y G + A++ + ++ R ++ + Sbjct: 434 ---PG----PESLYNQGNALAKL--------GKLEKAIEKYERALQEAPDFEDA-KTNKK 477 Query: 182 VTV 184 + Sbjct: 478 IIE 480 >gi|327312382|ref|YP_004327819.1| hypothetical protein HMPREF9137_0067 [Prevotella denticola F0289] gi|326945155|gb|AEA21040.1| tetratricopeptide repeat protein [Prevotella denticola F0289] Length = 1122 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 20/50 (40%) Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + V +Y D E ++ L Y+ A V+ + +YP+ W Sbjct: 617 LRRVSDDYPDYEQMDDVYYHLYLLYMRKGDQQMADSYVTRLSRKYPKSKW 666 >gi|317478699|ref|ZP_07937853.1| hypothetical protein HMPREF1007_00969 [Bacteroides sp. 4_1_36] gi|316905129|gb|EFV26929.1| hypothetical protein HMPREF1007_00969 [Bacteroides sp. 4_1_36] Length = 1056 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 75/230 (32%), Gaps = 36/230 (15%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSA 101 +R L + D +Y + +L ++ + A +Y +D +L+ + Sbjct: 452 NRPKELPADFDWNSTYGLYMQGKDWLNQKMYGNAEKYLKAALEKD----VYFIPALVSLS 507 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + Y G Y A L + ++ +Y+Y G+ Sbjct: 508 SLYYKKGMYLDACELVKRVLSLDTYHGEANYLY---GLC--------SRAMGNLADAKDG 556 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 S + + AA E ++G Y++ + A L Sbjct: 557 FS-VATFSPGF---------------RTAAYE-QLGELYMREENWEKAEQYALKSLEYNQ 599 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 +A++ + L Y ++A + + E+ P +W R+ E L++ Sbjct: 600 MNLYAKQLLIVL---YRKSNHAEKALSEIEKMTEQLPLLHWVRFEEYLLE 646 >gi|307131408|ref|YP_003883424.1| hypothetical protein Dda3937_04037 [Dickeya dadantii 3937] gi|306528937|gb|ADM98867.1| conserved protein [Dickeya dadantii 3937] Length = 389 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 57/184 (30%), Gaps = 34/184 (18%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ + +A E F Q + F A + L+ S + A E+ + Sbjct: 114 GRDYMVAGLYDRAEEIFKQLVDEEDFRVSALQ-QLLQI--HQSTSDWPNAIDTAEKLVKL 170 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 Q +++ Y + ++ S + A + Sbjct: 171 -------------------------GKTQLRSEIAHFYCEQSLQAM-GSDDLDKAMTMLK 204 Query: 184 ---VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 NQ A + +GR Y+ + Y A+ + VL D E E + L E Y L Sbjct: 205 KASAADNQCARVSIMLGRIYMAQQNYAQAVAVLEQVLQ--QDMELVSETLPMLQECYRHL 262 Query: 241 ALMD 244 + Sbjct: 263 QQPE 266 >gi|291539579|emb|CBL12690.1| hypothetical protein RO1_21780 [Roseburia intestinalis XB6B4] Length = 384 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 71/249 (28%), Gaps = 59/249 (23%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 +A L + L+ D R + + ++ ++ A FN Sbjct: 1 MVAGAVLFAALFTGCTNERLEDELDFR------KIGINSMQSGDYEGAVAAFNSALSQCV 54 Query: 89 FAGVARKSLLMSAF----VQYSAGKYQQAASLGEEYITQYPESKNVDY------VYYLVG 138 + L + QY+ G + A + + I DY YYL G Sbjct: 55 GKI--TDTELDICYYKAAAQYAGGDIEGALATYQAMI---------DYDEENGNAYYLHG 103 Query: 139 -MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN------SPYVKGARFYVTVGRNQLAA 191 +S Q D + + V+ + Y A +T + Sbjct: 104 CLSLKQQDTDT---------AKKDFANAVKYNPDDYELYVGIYENLAGNNMTEEGEEYLN 154 Query: 192 KEVEI-----------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 K +I GR Y G+Y A+ + + + +A L + Y A Sbjct: 155 KAFDIKGNSAENLTWRGRIYYLLGQYDNAVKELEGAVKK-----DSAKANLYLAQVYEAE 209 Query: 241 ALMDEAREV 249 A + Sbjct: 210 EDSANAEKY 218 >gi|260439095|ref|ZP_05792911.1| putative tetratricopeptide repeat-containing domain protein [Butyrivibrio crossotus DSM 2876] gi|292808407|gb|EFF67612.1| putative tetratricopeptide repeat-containing domain protein [Butyrivibrio crossotus DSM 2876] Length = 460 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 51/131 (38%), Gaps = 11/131 (8%) Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Y + +SY D +D +L ++++ S Y + N A Sbjct: 327 YAGLIDAVSYYL---DDDFDNTMVELAKIDVTKLPTDKAKSLYTL-----LDENCNSGAE 378 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 ++ G + +Y+ A+ + + +Y ++EA+ L ++ L D+ +E Sbjct: 379 TYLKAGSNAYDKSDYITAV---KYLELSYKFNSESDEAIYYLAMSHFRLNENDKGKEYAD 435 Query: 252 LIQERYPQGYW 262 +++ ++ + Sbjct: 436 ILKSKFGNSKF 446 >gi|218885322|ref|YP_002434643.1| hypothetical protein DvMF_0216 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756276|gb|ACL07175.1| hypothetical protein DvMF_0216 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 193 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 +A L++ +++A + Q + + P + ++ + + Y G Y A + Sbjct: 29 RASSLLEQGRYAEAATAYAQVTTENP-SDW--RAGVRHGYALYRQGDYAGARA 78 >gi|196229678|ref|ZP_03128542.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] gi|196226004|gb|EDY20510.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] Length = 474 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 34/238 (14%), Positives = 74/238 (31%), Gaps = 50/238 (21%) Query: 54 VRYQREVYEKAVLFLKEQNFSKA--YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 V ++ L+E +A ++++ + GK + Sbjct: 98 VNDPEQLLNYGEQLLREGYAPEAGLAAMQRAVEAR----PDDARAVIGLTMAYRTQGKLE 153 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 +A + + ++PE G + + + D + L R++E N Sbjct: 154 EARATITPFTEKHPEDP--------RGFFFLATVCNALGDAEGERKALD---RVLELDPN 202 Query: 172 ---------------------SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 S + A + LA+ I R KRG+ AA+ Sbjct: 203 AQQPLGIRFGLNDAEHDPAKESELARWAEERKSWMAYILASN---IAR---KRGDAKAAL 256 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 + +Y A E+ + L A L + ++V +++ G +++ + Sbjct: 257 ---KWAEKSYEIAPENEDVVLHLTAA---LGEARDFEKMVRIVKPLVESGKYSKRLNW 308 >gi|195391166|ref|XP_002054234.1| GJ22915 [Drosophila virilis] gi|194152320|gb|EDW67754.1| GJ22915 [Drosophila virilis] Length = 474 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 4/85 (4%) Query: 44 RDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 + L V D Y +AV +LK++N+ A + C R P K+LL A Sbjct: 254 EEYTLAIVYDPAQAARAYNNRAVSYLKKKNYLAAIDDCEACLRLEPDN---VKALLRLAD 310 Query: 103 VQYSAGKYQQAASLGEEYITQYPES 127 Y G+ +++ + + P + Sbjct: 311 ANYGQGRRRESYGFYQRVLALEPNN 335 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 39/129 (30%), Gaps = 16/129 (12%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + + K + + A E + P A ++ A Y A E + Sbjct: 239 RGNEYFKAKEYDNAIEEYTLAIVYDP--AQAARAYNNRAVSYLKKKNYLAAIDDCEACLR 296 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 P++ + + + D Y Q + + R++ N+ K A + Sbjct: 297 LEPDN--------VKAL---LRLADANYGQGRRRESYGFYQRVLALEPNNISAKKA---L 342 Query: 183 TVGRNQLAA 191 R QL Sbjct: 343 DELRQQLGE 351 >gi|17228741|ref|NP_485289.1| hypothetical protein alr1246 [Nostoc sp. PCC 7120] gi|17130593|dbj|BAB73203.1| alr1246 [Nostoc sp. PCC 7120] Length = 173 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 10/82 (12%), Positives = 31/82 (37%), Gaps = 6/82 (7%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYS 106 S + + Y+ + + +A E + + + + + + Sbjct: 2 STESLELAKTRYQAGKFAFENGQYREAVENLEKASALVARN--SRLGGEVEIWLVTAYEA 59 Query: 107 AGKYQQAASLGEEYITQYPESK 128 AG+ + A +L ++ + ++P S+ Sbjct: 60 AGRTEDAIALCQQ-LRRHPHSE 80 >gi|327484037|gb|AEA78444.1| GGDEF family protein [Vibrio cholerae LMA3894-4] Length = 648 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100 D+ L + D +Y L + + A +Y N+ + + Sbjct: 196 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 255 Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + G+Y+++ E+ + P + + YV+ +G +Y ++ V DQ Sbjct: 256 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYVELNNFVEGDQ-HLF 313 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L+Y++ + + LA + K +Y AI Sbjct: 314 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 355 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A S++ +AY+ LA + EA + Sbjct: 356 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 383 >gi|307546187|ref|YP_003898666.1| ABC transporter permease [Halomonas elongata DSM 2581] gi|307218211|emb|CBV43481.1| ABC-type transport system permease protein [Halomonas elongata DSM 2581] Length = 467 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 75/218 (34%), Gaps = 49/218 (22%) Query: 68 LKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQA----ASLGEEYI 121 ++++ + A E +N R +P + S+ +Y+++ E + Sbjct: 1 MQKRQWRVAIERWNVLRRLYPNGVAVWVQSSI-----AHRQLKEYEESERLLREAWERF- 54 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS----PYVKG 177 P + +V ++ + D+ D A+ L+ + + + + Sbjct: 55 ---PLNASV--------LAQWSEL-DIDRDDLAS--ALERLKMLRDNFPGHVVGWARAAD 100 Query: 178 ARFYV-----TVGRNQLAAKE--------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + V N+ A + V+ +K ++ A+ R+ V + + D Sbjct: 101 VLERLGRHDEAVTMNRHAREHCPDRPLPWVQYAEMAMKARDWPTALERWADVRSRFPD-- 158 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 + R EA A+ + +R++ + + Y W Sbjct: 159 -HAQGYIRAAEAAEAMGQVRYSRQLK--LAQEY-GNDW 192 >gi|302392828|ref|YP_003828648.1| hypothetical protein Acear_2093 [Acetohalobium arabaticum DSM 5501] gi|302204905|gb|ADL13583.1| Tetratricopeptide TPR_2 repeat protein [Acetohalobium arabaticum DSM 5501] Length = 729 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 67/210 (31%), Gaps = 47/210 (22%) Query: 48 LDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQY 105 L +++ + + Y K A + ++ ++KA E D+ ++ L Y Sbjct: 283 LKQAVEIKPKIKYYRKLAEFYREQSRYNKAIEAIKEALVLDY------KRGEL-----HY 331 Query: 106 SAGKY-------QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 + G+ QA S E + P +K YL + R + + Sbjct: 332 TLGELHLQLQNIDQARSSLERAVNLAPTNKE-----YLERL--FWTYRRSAVNDTMLENA 384 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + ++++ N A ++ G Y K ++ A+ R+Q + Sbjct: 385 QNTLDKLIDLAPNK-----------------AKYQIYSGDLYRKADKHHQAVHRYQRAI- 426 Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEARE 248 +L +Y L A + Sbjct: 427 --QITPEDSWGYIKLARSYEELDRYQIAEQ 454 >gi|301310686|ref|ZP_07216625.1| TPR domain protein [Bacteroides sp. 20_3] gi|300832260|gb|EFK62891.1| TPR domain protein [Bacteroides sp. 20_3] Length = 707 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 71/225 (31%), Gaps = 52/225 (23%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCS 84 + ++AV F+ + + + D +T Y + ++L++ + KA +N+ Sbjct: 127 MLVNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAI 186 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQ 143 P+ A + A + Y Y+ A + E + YY+ G+ Q Sbjct: 187 EMDPY--YAP-AYGNRAILHYQMDDYKDALADLNEALRLDTRESG----YYINRGLVRYQ 239 Query: 144 MIR----DVPYDQ----------------------RATKLMLQYMSRIVERYTNSPYVKG 177 M YDQ ++ ++++ ++ Sbjct: 240 MNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQQEPDN----- 294 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 Y+ L E G+Y A+ + +VL Y Sbjct: 295 ---YMAYYNRALLRFE---------TGDYRGAVQDYDVVLKQYPT 327 >gi|295133311|ref|YP_003583987.1| TPR repeat-containing protein [Zunongwangia profunda SM-A87] gi|294981326|gb|ADF51791.1| TPR repeat-containing protein [Zunongwangia profunda SM-A87] Length = 264 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 15/129 (11%), Positives = 34/129 (26%), Gaps = 32/129 (24%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y +L + +A +Y D +A + + ++A Sbjct: 145 YNAGFAYLYTGKYQEAIDYLEDFKSDDE--ILAPLATGGIGDAFMQLEQPEEALD----- 197 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVP-----------YDQRATKLMLQYMSRIVERY 169 YY+ + + + + L+Y++++ Y Sbjct: 198 -------------YYVKA-ANMRSNSFTTPKFLLKAAITALEVGNAEDALKYLNKLENEY 243 Query: 170 TNSPYVKGA 178 SP A Sbjct: 244 PESPEAGEA 252 >gi|164519037|ref|NP_945318.2| transmembrane and TPR repeat-containing protein 1 [Mus musculus] Length = 942 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 27/212 (12%), Positives = 60/212 (28%), Gaps = 51/212 (24%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A + +A ++ + +P A +L +A ++ Sbjct: 547 YNYANFLKDQGRNKEAIYHYRTALKLYP--RHAS-ALNNLG---TLTKDMAEAKMYYQKA 600 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +P+ + +G ++ Q T+ + + ++ + A Sbjct: 601 LQLHPQHNR---ALFNLG--------NLLKSQEKTEEAIMLLKESIKYGPD---FADAYS 646 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF--------------------QLVLANY 220 + LA +E R+ Y A I + +A+Y Sbjct: 647 SLASL---LAEQE----RFKEAEDIYQAGIKNCPDSSDLHNNYAVFLVDSGFPEKAVAHY 699 Query: 221 SD----AEHAEEAMARLVEAYVALALMDEARE 248 + A+ L Y +L +A E Sbjct: 700 QQAIQLSPSHHVAVVNLGRLYRSLGENSKAEE 731 >gi|119510808|ref|ZP_01629934.1| hypothetical protein N9414_04020 [Nodularia spumigena CCY9414] gi|119464571|gb|EAW45482.1| hypothetical protein N9414_04020 [Nodularia spumigena CCY9414] Length = 240 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 42/138 (30%), Gaps = 21/138 (15%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 A+ ++ N+++A Q P + L+ + +G+ +A + Sbjct: 49 ALSSARQGNYTEAIALLTQLIDRRPQNSVNYNNRGLI-----YFQSGEMPKALGDYNTAL 103 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P N+ Y +A L R ++ + YV+ Sbjct: 104 QLNP---NLASAYNNRANYHAAC--------EEFAAALADYDRAIDLNPS--YVRARINR 150 Query: 182 VTVGRNQLAAKEVEIGRY 199 R+ LA E I + Sbjct: 151 GITLRD-LAQYEEAIENF 167 >gi|115433392|ref|XP_001216833.1| mitochondrial precursor proteins import receptor [Aspergillus terreus NIH2624] gi|114189685|gb|EAU31385.1| mitochondrial precursor proteins import receptor [Aspergillus terreus NIH2624] Length = 630 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 45/141 (31%), Gaps = 20/141 (14%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGV 92 +G + + D L + Y +A L F++A + + + R F F+ Sbjct: 390 LGNKDAAGDDFELAISHNKDDPDIYYHRAQLHFILGEFAEAAKDYQKSIDLDRSFIFSH- 448 Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152 + QY G A + + + ++V VY ++ DQ Sbjct: 449 -----IQLGVTQYKMGSVASAMATFRRSVKNF---EDVPDVY--------NYYGELLLDQ 492 Query: 153 RATKLMLQYMSRIVERYTNSP 173 ++ + VE S Sbjct: 493 SNFAEAIEKFDKAVEMEKQSK 513 >gi|38569925|gb|AAR24495.1| TPR-repeat protein [uncultured crenarchaeote DeepAnt-EC39] Length = 275 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 52/146 (35%), Gaps = 22/146 (15%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + + +Y +A+ F+++ A +F + + P +L KYQ Sbjct: 10 KEKTEDLLY-QAMSFMEKGQAKNAISFFKKIIKQEP---KNIDALYNQGLALNQLKKYQD 65 Query: 113 AASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + ++ I P +Y G++ A++ T +Y ++ ++ Sbjct: 66 AITCFDKVIKISP-----EYFAAINNRGIALAEL--------GNTDGAFEYYNKAIKINP 112 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEI 196 Y A + V ++L E I Sbjct: 113 --KYAA-AHYNKGVLYDKLLQHEEAI 135 >gi|123788588|sp|Q3UV71|TMTC1_MOUSE RecName: Full=Transmembrane and TPR repeat-containing protein 1 gi|74210446|dbj|BAE23402.1| unnamed protein product [Mus musculus] Length = 942 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 27/212 (12%), Positives = 60/212 (28%), Gaps = 51/212 (24%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A + +A ++ + +P A +L +A ++ Sbjct: 547 YNYANFLKDQGRNKEAIYHYRTALKLYP--RHAS-ALNNLG---TLTKDMAEAKMYYQKA 600 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +P+ + +G ++ Q T+ + + ++ + A Sbjct: 601 LQLHPQHNR---ALFNLG--------NLLKSQEKTEEAIMLLKESIKYGPD---FADAYS 646 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF--------------------QLVLANY 220 + LA +E R+ Y A I + +A+Y Sbjct: 647 SLASL---LAEQE----RFKEAEDIYQAGIKNCPDSSDLHNNYAVFLVDSGFPEKAVAHY 699 Query: 221 SD----AEHAEEAMARLVEAYVALALMDEARE 248 + A+ L Y +L +A E Sbjct: 700 QQAIQLSPSHHVAVVNLGRLYRSLGENSKAEE 731 >gi|226943993|ref|YP_002799066.1| tetratricopeptide (TPR) repeat and VWA domain-containing protein [Azotobacter vinelandii DJ] gi|226718920|gb|ACO78091.1| tetratricopeptide (TPR) repeat and VWA domain-containing protein [Azotobacter vinelandii DJ] Length = 577 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 14/112 (12%), Positives = 29/112 (25%), Gaps = 18/112 (16%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVA----RKSLLMSAFVQY-------S 106 ++ + L+ +A F + A R + A Y Sbjct: 356 QQGRILLQAGRPGEAARRFEDSQWQGLALYQAGDYAAAAERFAQGQGAAAHYNSGNALAR 415 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 AG+ + A E + P + + + A + + A Sbjct: 416 AGEPEAALDAYERALELQPALEA---AQHNKALVEALLRQRQARQPDADGSA 464 >gi|222823243|ref|YP_002574816.1| hypothetical protein Cla_0202 [Campylobacter lari RM2100] gi|222538464|gb|ACM63565.1| conserved hypothetical protein [Campylobacter lari RM2100] Length = 329 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 42/143 (29%), Gaps = 25/143 (17%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 D E+ +KA+ + F A E F + +S ++Y Sbjct: 204 EVKDDSWKKLQSSEILKKAIEETNKNQFEVAKEKFEHLISIH-YKP--ARSTFWLGEIRY 260 Query: 106 SAGKYQQAASLGEEYITQYPESKNV----DYV---YYLVGMSYAQMIRDVPYDQRATKLM 158 Y A ++ S + DYV Y +S D D ++ Sbjct: 261 KQQDYAGALGFYKK-------SSAISTKGDYVPKLLYHTAISL-----DKVGDPKSANKF 308 Query: 159 LQYMSRIVERYTNSPYVKGARFY 181 + + Y +SP K + Sbjct: 309 YKALKT---AYPDSPEAKASPDR 328 >gi|325104627|ref|YP_004274281.1| tetratricopeptide domain protein [Pedobacter saltans DSM 12145] gi|324973475|gb|ADY52459.1| tetratricopeptide domain protein [Pedobacter saltans DSM 12145] Length = 189 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 10/87 (11%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGV--ARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + +FS A YF + ++ L + + Y A Y+++ S ++ I Sbjct: 11 GQRSMMNGDFSSAANYFEK-----AYSADNSNMNVLYLMGYSAYHANNYRKSISAFDKLI 65 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDV 148 + P +++ YY G + + + + Sbjct: 66 SFKP-DESI--AYYYRGKAKMNLCQQI 89 >gi|193214090|ref|YP_001995289.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193087567|gb|ACF12842.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC 35110] Length = 361 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 56/171 (32%), Gaps = 20/171 (11%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQ-CSRDFP 88 A + + D Y +++ Y E+Y+ + L+ K + A F + Sbjct: 154 ARTLTALGLTKDAIDSYNNAIGKEAYDPELYKLRGDLYAKLGFYGDALADFEKALELRDS 213 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 +A L A V G Y +A I P + YY G+ +I Sbjct: 214 YA----LCYLSRADVYRRLGLYAEAIEDVNVAIKLIPSNPEG---YYYRGLI---LISRG 263 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 Y Q ++ + + N AR V + LA ++ I Y Sbjct: 264 GYPQ-----AIRNFDYALSQDPNYHLAYHAR---GVAHDSLAQYQMSISDY 306 >gi|150007314|ref|YP_001302057.1| TPR repeat-containing protein [Parabacteroides distasonis ATCC 8503] gi|149935738|gb|ABR42435.1| putative exported Tpr repeat-family protein [Parabacteroides distasonis ATCC 8503] Length = 707 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 71/225 (31%), Gaps = 52/225 (23%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCS 84 + ++AV F+ + + + D +T Y + ++L++ + KA +N+ Sbjct: 127 MLVNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAI 186 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQ 143 P+ A + A + Y Y+ A + E + YY+ G+ Q Sbjct: 187 EMDPY--YAP-AYGNRAILHYQMDDYKDALADLNEALRLDTRESG----YYINRGLVRYQ 239 Query: 144 MIR----DVPYDQ----------------------RATKLMLQYMSRIVERYTNSPYVKG 177 M YDQ ++ ++++ ++ Sbjct: 240 MNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQQEPDN----- 294 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 Y+ L E G+Y A+ + +VL Y Sbjct: 295 ---YMAYYNRALLRFE---------TGDYRGAVQDYDVVLKQYPT 327 >gi|126340092|ref|XP_001366229.1| PREDICTED: similar to FKBP52; 52 kD FK506 binding protein [Monodelphis domestica] Length = 462 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 34/78 (43%), Gaps = 2/78 (2%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYF 80 L ++A+C L ++ + ++ D ++ ++ + +L +F A + F Sbjct: 320 LRLASHLNLAMCHLKLHSFSAAVESCNKALELDNNNEKGLFRRGEAYLAVNDFELARDDF 379 Query: 81 NQCSRDFPFAGVARKSLL 98 + + +P + A ++ L Sbjct: 380 QKVLKLYP-SNKAARTQL 396 >gi|126338705|ref|XP_001363721.1| PREDICTED: similar to FAM10A4 protein [Monodelphis domestica] Length = 367 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 29/89 (32%), Gaps = 9/89 (10%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLL 98 D + D +++V A+ L N A E F + + P A+++ + Sbjct: 100 GDENAEVTDEMIDQANEKKV--AAIDALNSGNLESAIELFTEAIKLNPRLAILYAKRASI 157 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPES 127 K A + I P+S Sbjct: 158 FI-----KLQKPNAAIRDCDRAIEINPDS 181 >gi|13097417|gb|AAH03447.1| FK506 binding protein 4 [Mus musculus] Length = 458 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 17/146 (11%), Positives = 42/146 (28%), Gaps = 30/146 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSL-------LMSAFVQYSAGK 109 E+ + KE + +A + + + +K L A Sbjct: 275 ERGTAYFKEGKYKQALLQYKKIVSWLEYESSFSGEEMQKVRALRLASHLNLAMCHLKLQA 334 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + D ++++ Y Sbjct: 335 FSAAIESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 383 Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191 ++ A+ + V R QLA Sbjct: 384 PSNK---AAKTQLAVCQQRTRRQLAR 406 >gi|56460107|ref|YP_155388.1| TPR repeat- / von Willebrand factor type A domain-containing protein [Idiomarina loihiensis L2TR] gi|56179117|gb|AAV81839.1| Uncharacterized protein containing a von Willebrand factor type A (vWA) domain and TPR repeats [Idiomarina loihiensis L2TR] Length = 610 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 6/58 (10%), Positives = 18/58 (31%), Gaps = 8/58 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + ++ ++ A E F+Q + ++ +Y A + Sbjct: 384 FRQGAALYRDGDYEAAAEAFSQSD--------SAEAQYNLGNALAKQQQYDAAIEAYD 433 >gi|32471191|ref|NP_864184.1| O-linked GlcNAc transferase [Rhodopirellula baltica SH 1] gi|32396893|emb|CAD71861.1| probable O-linked GlcNAc transferase [Rhodopirellula baltica SH 1] Length = 508 Score = 37.0 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 26/81 (32%), Gaps = 11/81 (13%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 G+ + A + + + + +V + + R + D + + R Sbjct: 432 ETGQPELAVAAYRGALALHDDYPDV----------HYNLARILE-DLHRSVEAEHHWRRF 480 Query: 166 VERYTNSPYVKGARFYVTVGR 186 ++ SP+ A + R Sbjct: 481 LQLSPGSPWADEAHARLEELR 501 >gi|148733182|gb|ABR09249.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 51 [Homo sapiens] Length = 1389 Score = 37.0 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAX 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|312382640|gb|EFR28030.1| hypothetical protein AND_04523 [Anopheles darlingi] Length = 380 Score = 37.0 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 26/143 (18%) Query: 61 YEKAVLFLKEQNFSKAYEYFN----QCSRDFPFAGVARKSL------LMSAFVQYSAGKY 110 + + + KA Y+N Q +R +P + L A V+ +Y Sbjct: 240 FRDGDDVRANRRYKKAERYYNFFTNQLNRQYPRERQTQLEQFQLLNCLNQAAVRLRLKEY 299 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + PE+ Y G++ +M R + L + R ++R Sbjct: 300 ANVVHACNVALAIDPENTK---ALYRRGLAQNEM--------RNYERALDDLGRALQRLP 348 Query: 171 -----NSPYVKGARFYVTVGRNQ 188 S Y + + + + Q Sbjct: 349 EDKLIQSEYERTRKNLLNYTQQQ 371 >gi|218781367|ref|YP_002432685.1| hypothetical protein Dalk_3529 [Desulfatibacillum alkenivorans AK-01] gi|218762751|gb|ACL05217.1| Tetratricopeptide domain protein [Desulfatibacillum alkenivorans AK-01] Length = 451 Score = 37.0 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 83/261 (31%), Gaps = 44/261 (16%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 Y+ L + + V + + S++ SV + +Y KA + E +A Sbjct: 23 YKFKNLMLAVMAFALLVPGVCFAKADSQESLPLSVRQI-----LY-KAYTAMNENKPGEA 76 Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFV----QYSAGKYQQAASLGEEYITQYPESKNVDY 132 + ++ A ++ M F +Y A Y+ A + E+ + P Sbjct: 77 AALLCKFKQNPKNAKDMAEARTMVEFAEGNGRYMAKDYKGAMACFEQAVKSDPN------ 130 Query: 133 VYYLVGMSYAQMIRDVPYD-QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191 Y S ++ D RA + LQ + E+ + Y A Sbjct: 131 --YSAAWSNMAVLCHEMGDTLRAAQCFLQAYNTAEEKKPDLLYSAAAA------------ 176 Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSD--AEHAEEAMARLVEAYVALALMDEAREV 249 +L +Y +I F+ + + E V AY+ +A + Sbjct: 177 --------FLMTEQYADSIAAFERLFTEFPQQVTNQWRE---YAVHAYLGSKQPRKALRL 225 Query: 250 VSLIQERYPQGYWARYVETLV 270 V + W R+ E L+ Sbjct: 226 VEYLAVNTEGNEWRRWNEFLL 246 >gi|157738163|ref|YP_001490847.1| TPR repeat-containing protein [Arcobacter butzleri RM4018] gi|157700017|gb|ABV68177.1| TPR repeat protein [Arcobacter butzleri RM4018] Length = 696 Score = 37.0 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 13/121 (10%) Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV--- 60 +L + I + Y++ F + IF SI E Q + + D + E+ Sbjct: 9 MLLFRMEILKKLVYKIL-FGIFIFNSILYANNDLLESQPEIIFETERLLDSQENLEIQVD 67 Query: 61 YEKAVLFLKEQNFSKAYEYFNQ--CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + KAVL LK+ + +A + F + + P SLL Y G + A S Sbjct: 68 FNKAVLHLKKGEYEEAIKIFEKTALVIEVP-------SLLNMGIAYYKLGDTETAKSYLN 120 Query: 119 E 119 + Sbjct: 121 K 121 >gi|72549273|ref|XP_843506.1| MAP kinase kinase-like protein [Leishmania major strain Friedlin] gi|323364023|emb|CBZ13029.1| putative protein kinase [Leishmania major strain Friedlin] Length = 1343 Score = 37.0 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 15/139 (10%), Positives = 44/139 (31%), Gaps = 33/139 (23%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119 E+ K + +A Y+ Q P + +S F ++ +++++A+ + Sbjct: 49 EEGNEAFKAGRYHEAIRYYTQAIEVDPDSEFLYTNRS-----FAYFNIKEFEKSAADAAK 103 Query: 120 -------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + + Y +G++ + D + + + S Sbjct: 104 AVEINANFFKGH----------YRLGLAQMSL-NDFGHAMESLRKAWALA-------P-S 144 Query: 173 PYVKGARFYVTVGRNQLAA 191 + R + +++A Sbjct: 145 ENKEAIRVAMAKCESKMAR 163 >gi|86133820|ref|ZP_01052402.1| hypothetical protein MED152_03910 [Polaribacter sp. MED152] gi|85820683|gb|EAQ41830.1| hypothetical protein MED152_03910 [Polaribacter sp. MED152] Length = 978 Score = 37.0 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 19/147 (12%), Positives = 43/147 (29%), Gaps = 19/147 (12%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 D+ Y + +Y+ A ++ A F + F A + + ++ Sbjct: 371 EKFPTDTDITYAYNKLMYDTAKNYVASNQDQLALPIFEELVSSPDFQKEAEQ-QIYGIYI 429 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 KY +A ++ I P + + + + + + L+ Sbjct: 430 S--QQKYDEATDQIDKLIGLDPNNPD-----------FLRRKSTLYQEMELFDDALEITR 476 Query: 164 RIVERYTNSP-----YVKGARFYVTVG 185 + + Y + YV Y T Sbjct: 477 NLEQNYPLNQTYPALYVDQIEAYATYL 503 >gi|151946827|gb|ABS19060.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 200 [Homo sapiens] Length = 1014 Score = 37.0 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEXHLRLGLMFKVBTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|326435682|gb|EGD81252.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818] Length = 736 Score = 37.0 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 64/231 (27%), Gaps = 55/231 (23%) Query: 60 VYEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +Y + + + +A + + + P YS G Y Sbjct: 314 LYNNLGAAYADKGEYDRAVQLYEKALAITVEALGEKHPSTADTYN---NLGNAYYSKGDY 370 Query: 111 QQAASLGE-----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY-MSR 164 +A + E T + + Y +G++Y D + L + Sbjct: 371 DKAVAFYEKALAIRVETLGEKHPSTAQTYNNLGIAYHSK-GDYDKAIAYHEKALAIKVET 429 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL------- 217 + E + N+ N L G Y +GEY AI ++ L Sbjct: 430 LGEHHPNT----------ATTYNNL-------GEAYYSKGEYDRAIGCYEKALTIKVDTV 472 Query: 218 -ANYSDAEHAEEAMARLVEAYVALALMDEARE--------VVSLIQERYPQ 259 + L Y + D+A + V + E++P Sbjct: 473 GEKHPSTASTY---GNLGSVYHSKGDYDKAIQLYEKDLAITVEALGEKHPS 520 >gi|258591282|emb|CBE67579.1| putative TPR domain protein [NC10 bacterium 'Dutch sediment'] Length = 585 Score = 37.0 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 41/134 (30%), Gaps = 23/134 (17%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA---GVARKSLLMSAFVQYSAGKYQ 111 RY ++ + + +++ + +A + + P LL + + Y Sbjct: 359 RYPDALFHRGYILSQKERYVEAGDLLSIAGSLRPNEGVIPY----LLGLIY--FQQKSYP 412 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 QA + E + P N Y Y +G S + R + R++ Sbjct: 413 QAIAQLERALGLEPS--NAAY-LYQLG-SAFERSRQID-------KAETIFRRLLTVDPK 461 Query: 172 SPYVKGARFYVTVG 185 A Y+ Sbjct: 462 H---ADAYNYLGYM 472 >gi|293453834|ref|ZP_06664253.1| cellulose synthase operon protein C [Escherichia coli B088] gi|291321960|gb|EFE61391.1| cellulose synthase operon protein C [Escherichia coli B088] Length = 1161 Score = 37.0 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 77/237 (32%), Gaps = 38/237 (16%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 447 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 503 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQY-PESKNVDYVY--YLVG-------MSYAQMIRDV 148 + + AG+ QA + Q+ P Y Y YL G +++ I + Sbjct: 504 RLSQDLWQAGQRSQA-DTLMRNLAQHKPNDPEQVYAYGLYLSGHDQDRAALAH---INSL 559 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEI 196 P Q + +V R S V + G+ A ++ + Sbjct: 560 PRAQWN-----SNIQELVNRL-QSDQVMETANRLRESGKEAEAEAMLRQQPPSTRIDLTL 613 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 614 ADWAQQRRDYTAARAAYQNVLTLEPT---NADAILGLTEVDIAAGDTAAARSQLAKL 667 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 60/210 (28%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 360 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 416 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 417 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 462 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 463 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 511 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + + P Y L Sbjct: 512 AGQRSQADTLMRNLAQHKPNDPEQVYAYGL 541 >gi|158339554|ref|YP_001520943.1| hemagglutination activity domain-containing protein [Acaryochloris marina MBIC11017] gi|158309795|gb|ABW31411.1| haemagglutination activity domain protein [Acaryochloris marina MBIC11017] Length = 1756 Score = 37.0 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 7/72 (9%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC-----SRDFPFAGVARKSLLMSAFVQ 104 R ++ E A ++ + +A Y+ Q P A + +S L A+ Sbjct: 942 QGESSRSLPQLLEAARQEYQQAKYPEAITYWTQAVNQLSKSKHPGAYASVQSHLALAYHH 1001 Query: 105 YSAGKYQQAASL 116 G + +A Sbjct: 1002 --LGDWDKAREA 1011 >gi|145219214|ref|YP_001129923.1| TPR repeat-containing protein [Prosthecochloris vibrioformis DSM 265] gi|145205378|gb|ABP36421.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeovibrioides DSM 265] Length = 201 Score = 37.0 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 52/164 (31%), Gaps = 33/164 (20%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 ++L +Y +A + + +D Y+ +G +D P Sbjct: 53 AMLRLGNAYAQQNRYDEAEETYKNALAL---DPELDAAYHSLGAVSFNR-QDYPR----- 103 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 ++ SR +ER + N L ++ Y A + Sbjct: 104 --AREWFSRHLERSPKD------SLRLYDLGNAL-----------MQMKAYDEAADAYSA 144 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI--QERY 257 + N + EA L ++ MDEAR++ + + + Y Sbjct: 145 AIDN---SRSFTEAHYNLAVCFIKTGRMDEARQIYNWLLDKNNY 185 >gi|126657794|ref|ZP_01728948.1| hypothetical protein CY0110_26383 [Cyanothece sp. CCY0110] gi|126621011|gb|EAZ91726.1| hypothetical protein CY0110_26383 [Cyanothece sp. CCY0110] Length = 308 Score = 37.0 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 5/62 (8%), Positives = 20/62 (32%), Gaps = 9/62 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + + ++ + +A + D P + + G+ +A ++ Sbjct: 125 FTLGNAYFQQGKYQQAATELEEGLKIKSDVP------SAQFDLGNAYFKLGRMGEAIAVY 178 Query: 118 EE 119 ++ Sbjct: 179 QK 180 >gi|323179519|gb|EFZ65086.1| cellulose synthase operon protein C [Escherichia coli 1180] Length = 1157 Score = 36.6 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 500 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 556 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + +V R S V + G+ A ++ + Sbjct: 557 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 610 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 611 DWAQQRRDYTAARAAYQNVLTLEPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 6.2, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 537 >gi|162448624|ref|YP_001610991.1| hypothetical protein sce0354 [Sorangium cellulosum 'So ce 56'] gi|161159206|emb|CAN90511.1| hypothetical protein predicted by Glimmer/Critica [Sorangium cellulosum 'So ce 56'] Length = 330 Score = 36.6 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 34/99 (34%), Gaps = 11/99 (11%) Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 AL + +I + +G Q + D ++ R E+Y + ++ A F + Sbjct: 6 ALALCAAIVLSAPLGAFAQPAGDKTEEADARFRRGVELYNEV-------DYGAALTEFRR 58 Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 P A + L A Y Y A E Y+ Sbjct: 59 AYELAP----AYQVLYNIAGTCYQLKDYACALRAFERYL 93 >gi|160889656|ref|ZP_02070659.1| hypothetical protein BACUNI_02083 [Bacteroides uniformis ATCC 8492] gi|156860648|gb|EDO54079.1| hypothetical protein BACUNI_02083 [Bacteroides uniformis ATCC 8492] Length = 993 Score = 36.6 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 75/230 (32%), Gaps = 36/230 (15%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSA 101 +R L + D +Y + +L ++ + A +Y +D +L+ + Sbjct: 389 NRPKELPADFDWNSTYGLYMQGKDWLNQKMYGNAEKYLKAALEKD----VYFIPALVSLS 444 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 + Y G Y A L + ++ +Y+Y G+ Sbjct: 445 SLYYKKGMYLDACELVKRVLSLDTYHGEANYLY---GLC--------SRAMGNLADAKDG 493 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 S + + AA E ++G Y++ + A L Sbjct: 494 FS-VATFSPGF---------------RTAAYE-QLGELYMREENWEKAEQYALKSLEYNQ 536 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 +A++ + L Y ++A + + E+ P +W R+ E L++ Sbjct: 537 MNLYAKQLLIVL---YRKSNHAEKALSEIEKMTEQLPLLHWVRFEEYLLE 583 >gi|156540612|ref|XP_001603671.1| PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] Length = 1346 Score = 36.6 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 5/94 (5%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM----SAFVQYSAG 108 D R + + L+ +F KA + F + P ARK + Sbjct: 330 DPRNVEGLVARGALYANSGSFKKAIDDFETALKLNPSHANARKYMAETLVALGRSYEDEK 389 Query: 109 KYQQAASLGEEYITQYPESKNVD-YVYYLVGMSY 141 KY++A E ++ P + + Y+ G + Sbjct: 390 KYEEALKAYENCLSIAPYHEEAKNSIEYIKGKTN 423 >gi|158522865|ref|YP_001530735.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] gi|158511691|gb|ABW68658.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans Hxd3] Length = 222 Score = 36.6 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 AA F+ + A + H E A+ L Y + +++++ + I YP +A Sbjct: 159 AAADCFETIAAT-PVSAHKETALFNLARLYEQVGETEKSQKAFAQIVSEYPDSMYADIA 216 >gi|219849278|ref|YP_002463711.1| MCP methyltransferase, CheR-type with Tpr repeats [Chloroflexus aggregans DSM 9485] gi|219543537|gb|ACL25275.1| MCP methyltransferase, CheR-type with Tpr repeats [Chloroflexus aggregans DSM 9485] Length = 477 Score = 36.6 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 42/142 (29%), Gaps = 23/142 (16%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + ++ A E F P A L ++A + G+ A + + Sbjct: 319 EGRRMIESGQIEAALELF----AHAPLAGRYAPAVLALTAQAHANRGELDLALAEARRAL 374 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM--------LQYMSRIVERYTNSP 173 P V + L+G+ Y + + R + L + E Y + Sbjct: 375 ELNPL---VTEAHILLGLIYERQ-QQFTLAIRHLERARYLNSDSPLVAFH-LAECYRQTD 429 Query: 174 YVKGARFYVTVGRNQLAAKEVE 195 V A + RN A + Sbjct: 430 RVADA---IREYRN--AEHLLH 446 >gi|108764009|ref|YP_633730.1| FHA domain- TPR-repeat-containing protein [Myxococcus xanthus DK 1622] gi|108467889|gb|ABF93074.1| FHA domain/tetratricopeptide repeat protein [Myxococcus xanthus DK 1622] Length = 574 Score = 36.6 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 25/72 (34%), Gaps = 14/72 (19%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSL--LMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + +A E N+C P ++ L + + ++ A + ++ P Sbjct: 504 RYRQAIEQLNKCLELEP-----TRAECHLYLGSAYANDNQPEKGAVHYKRFLELAPNH-- 556 Query: 130 VDYVYY--LVGM 139 YY + G+ Sbjct: 557 ---AYYERVKGL 565 >gi|28868247|ref|NP_790866.1| cellulose synthase operon protein C [Pseudomonas syringae pv. tomato str. DC3000] gi|28851484|gb|AAO54561.1| cellulose synthase operon protein C [Pseudomonas syringae pv. tomato str. DC3000] Length = 1230 Score = 36.6 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 64/213 (30%), Gaps = 34/213 (15%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A + KA Q R P L A VQ AG+ A + + + Sbjct: 290 QEARDLQAKGQTGKAQALLAQAQRQNPDN---IDVRLTLADVQVQAGQLDAAQAGYRQVL 346 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF- 180 + + G+ R + + + + A+ Sbjct: 347 ATQRGNPQA-----IRGLINVLAQRG---------QADEALRLLDTLSP----GEQAKLG 388 Query: 181 ---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 R+ ++ R +RG+ AA + + N D +ARL Y Sbjct: 389 DSGRFKALRST------QVARLAEQRGDVRAAQVALKDAVKNDPDNVWTRFDLARL---Y 439 Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLV 270 + +AR ++ + + P A Y L+ Sbjct: 440 LKTDEAPKARALIDELLKAQPNNIDALYTSALL 472 >gi|27806463|ref|NP_776578.1| peptidyl-prolyl cis-trans isomerase D [Bos taurus] gi|2507229|sp|P26882|PPID_BOVIN RecName: Full=Peptidyl-prolyl cis-trans isomerase D; Short=PPIase D; AltName: Full=40 kDa peptidyl-prolyl cis-trans isomerase; AltName: Full=Cyclophilin-40; Short=CYP-40; AltName: Full=Cyclophilin-related protein; AltName: Full=Estrogen receptor-binding cyclophilin; AltName: Full=Rotamase D gi|14277809|pdb|1IHG|A Chain A, Bovine Cyclophilin 40, Monoclinic Form gi|14277815|pdb|1IIP|A Chain A, Bovine Cyclophilin 40, Tetragonal Form gi|393300|dbj|BAA03159.1| cyclophilin [Bos taurus] gi|87578323|gb|AAI13319.1| Peptidylprolyl isomerase D [Bos taurus] gi|296478699|gb|DAA20814.1| peptidylprolyl isomerase D [Bos taurus] Length = 370 Score = 36.6 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 49/121 (40%), Gaps = 2/121 (1%) Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQRE 59 + V G +A +L AL+ +I C L + Q + D L+++ D + Sbjct: 250 LRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKA 309 Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A + + + +A + P A ++ L+ + A K ++ A+ + Sbjct: 310 LYRRAQGWQGLKEYDQALADLKKAQEIAP-EDKAIQAELLKVKQKIKAQKDKEKAAYAKM 368 Query: 120 Y 120 + Sbjct: 369 F 369 >gi|332305582|ref|YP_004433433.1| type IV pilus biogenesis/stability protein PilW [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172911|gb|AEE22165.1| type IV pilus biogenesis/stability protein PilW [Glaciecola agarilytica 4H-3-7+YE-5] Length = 329 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 15/114 (13%), Positives = 42/114 (36%), Gaps = 8/114 (7%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + ++F + + L Q+S D + + + +L+ N+S+A Sbjct: 2 KFFRFFVVVLIF----GLSACASQNSGTAVDDFDKQKAAKTRL-SLGLTYLENGNYSQAK 56 Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 ++ FA A+ + + + A+ ++ I+ P++ ++ Sbjct: 57 FNLDKALA---FAPNLADVHYGMAYYYQNVEEPESASKAYQKAISLAPKNADIA 107 >gi|326922163|ref|XP_003207321.1| PREDICTED: cartilage-associated protein-like [Meleagris gallopavo] Length = 265 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 20/48 (41%), Gaps = 5/48 (10%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 F + A +A + ++ ++P+ + + M+Y + I D Sbjct: 15 FAYFKANNLPKAIAAAHTFLLKHPDDEMM-----QRNMAYYKSIPDAE 57 >gi|254784608|ref|YP_003072036.1| response regulator receiver protein [Teredinibacter turnerae T7901] gi|237687115|gb|ACR14379.1| response regulator receiver protein [Teredinibacter turnerae T7901] Length = 557 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 80/223 (35%), Gaps = 23/223 (10%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFL-----KEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 D + + + + E Y +A L + ++F+ A +R P + + + L Sbjct: 230 DSAEEILNSIIEEDERYVEAHDLLAEVHKERKDFAAAQRATENATRVSPKSVLRHRQLAE 289 Query: 100 SAFVQYSAGKYQQAASLGEEYIT--QYPESK-NVDYVYYLVGMSYAQMIRDVPYDQRATK 156 A + A + I + DY Y +S + + T+ Sbjct: 290 LAE---QNNDDEIALKSHQNAIRWGFNSCHESEQDYFNYARKVSEVVQGDNSNNAKTLTR 346 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 ++ R +R+ + P + + + + L + E + + AA+ + + + Sbjct: 347 QGHNFLDRARKRFADRPEIA-VQAQLVEIQLHLGSGE---------QKKAEAAVEKAREM 396 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + + E ++ + A+ DEARE+++ + R+ Sbjct: 397 YNDLA-TPPVETSLE-MARTLHAMNNEDEARELLTQLAARHEN 437 >gi|228910825|ref|ZP_04074634.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus thuringiensis IBL 200] gi|228848776|gb|EEM93621.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus thuringiensis IBL 200] Length = 273 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 24/66 (36%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 +Q+ K LT S ++ L + + L E+ EKA L+++ Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60 Query: 76 AYEYFN 81 + F Sbjct: 61 EIKKFQ 66 >gi|195126158|ref|XP_002007541.1| GI12333 [Drosophila mojavensis] gi|193919150|gb|EDW18017.1| GI12333 [Drosophila mojavensis] Length = 661 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 8/69 (11%) Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGV---- 92 R +SV + E+Y +A ++ Q ++A E F + F A + Sbjct: 581 CPRCRKNVSLKESVAKLIKIEELYREAAEAMQAQKTNEAIELFKEGIDAFFQIAALPHKD 640 Query: 93 ---ARKSLL 98 A+++LL Sbjct: 641 TLIAQQALL 649 >gi|167043246|gb|ABZ07952.1| putative TPR domain protein [uncultured marine crenarchaeote HF4000_ANIW141M12] Length = 272 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 52/141 (36%), Gaps = 21/141 (14%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +++ KA+ F++++ A F + + P ++ KYQ A + Sbjct: 11 EDLFYKAMFFMEKRQPKAAIPLFKKIVKQDP---KNIAAIYNQGLALNQLKKYQDAITCF 67 Query: 118 EEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 ++ I P+ Y G+S A++ T+ L+Y ++ +E Sbjct: 68 DKVIEINPK-----YVSAINNRGISLAEL--------GNTEDALEYYNKAIEIDPKH--- 111 Query: 176 KGARFYVTVGRNQLAAKEVEI 196 A + V ++L E I Sbjct: 112 AAAHYNKGVLYDKLLLHEEAI 132 >gi|172035680|ref|YP_001802181.1| hypothetical protein cce_0764 [Cyanothece sp. ATCC 51142] gi|171697134|gb|ACB50115.1| unknown [Cyanothece sp. ATCC 51142] Length = 294 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 5/62 (8%), Positives = 20/62 (32%), Gaps = 9/62 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + + ++ + +A + D P + + G+ +A ++ Sbjct: 125 FTLGNAYFQQGKYKQAATELEEGLNIKSDVP------SAQFDLGNAYFKLGRMGEAIAVY 178 Query: 118 EE 119 ++ Sbjct: 179 QK 180 >gi|224534068|ref|ZP_03674651.1| TPR domain protein [Borrelia burgdorferi CA-11.2a] gi|225548538|ref|ZP_03769586.1| TPR domain protein [Borrelia burgdorferi 94a] gi|224512767|gb|EEF83135.1| TPR domain protein [Borrelia burgdorferi CA-11.2a] gi|225370801|gb|EEH00236.1| TPR domain protein [Borrelia burgdorferi 94a] gi|312149253|gb|ADQ29324.1| TPR domain protein [Borrelia burgdorferi N40] Length = 379 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 36/212 (16%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 K+ N+ KA Y+ +C P +L + Y++A + EEY+ PE+ Sbjct: 70 KKNNYDKAIVYYQKCLVKHPSNNY---ALFGLGDCYRNLDNYKKATDIWEEYLKYDPENI 126 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180 V V SY ++ + + Q +++E ++ Y + Sbjct: 127 T---VLTRVAASYRKL--------KNFQKSKQTYLKVMELMPDNDYALVGIGHLYYDFKE 175 Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 Y + L E+ IG Y K E+ I F+ L + A Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGIYFFKKALEI---SPSNFYA 232 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + L + Y EA + I E+ P+ Sbjct: 233 VFGLADCYRGNKEYKEALKYWLDIIEKDPKNN 264 >gi|153008498|ref|YP_001369713.1| TPR repeat-containing protein [Ochrobactrum anthropi ATCC 49188] gi|151560386|gb|ABS13884.1| Tetratricopeptide TPR_2 repeat protein [Ochrobactrum anthropi ATCC 49188] Length = 230 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 42/130 (32%), Gaps = 17/130 (13%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + + A + E+ + A ++ N+ P A + A V + Y A Sbjct: 113 LMQWANAAMLERRYPSAIDFLNEAIALDP--EYAE-AWNRRATVYFLQKDYAHAMYDINR 169 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P L GM+ +R + + L+ + + Y ++ A+ Sbjct: 170 TLELEPRHYGA-----LTGMAAILRLRGLK------EQALKAYEQALIVYPM---MRDAQ 215 Query: 180 FYVTVGRNQL 189 ++L Sbjct: 216 KNFNDLADEL 225 >gi|222056431|ref|YP_002538793.1| hypothetical protein Geob_3349 [Geobacter sp. FRC-32] gi|221565720|gb|ACM21692.1| conserved hypothetical protein [Geobacter sp. FRC-32] Length = 180 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 68/197 (34%), Gaps = 36/197 (18%) Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE----------- 59 +F+ +L L + F+ A+ L+G S + T +RE Sbjct: 1 MFKDRFDKLLWLLLFMVFA-ALAMLIGRHTSSGKTNAPAVATSKAMEREMAFQARVTLLQ 59 Query: 60 -VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +Y + A ++ +R +P +M + + AG ++A S Sbjct: 60 KLYAPVEDLRLRGDMQGALLRLDELNRSYPGEAHG---YIMKGQILHQAGAIEEAVSS-- 114 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR-ATKLMLQYMSRIVERY---TNSPY 174 YV + +S + R P +R K +++ +I+ R ++ Sbjct: 115 -------------YVQGIK-LSGNYIDRKNPLSRRDDVKRLVEEGQQIIRRARANPDNIS 160 Query: 175 VKGARFYVTVGRNQLAA 191 + A + R++LA Sbjct: 161 LAAAVKNINYLRSRLAG 177 >gi|110597057|ref|ZP_01385346.1| TPR repeat [Chlorobium ferrooxidans DSM 13031] gi|110341248|gb|EAT59713.1| TPR repeat [Chlorobium ferrooxidans DSM 13031] Length = 573 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 87/266 (32%), Gaps = 65/266 (24%) Query: 7 RAICIF-EAWAYQLY-KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64 R++C AW + +Y + F +IA+ + R + DS+++ + + + A Sbjct: 2 RSLCGAIPAWRHAVYFMLLFSAFLAIALSGCSSEPVVAGRSLKADSLSESKRRE--FVGA 59 Query: 65 VLFLKEQNFSKAYEYFNQCSR--------DFPFAG-------------VARKS-LLMSAF 102 +L + A + + + ++ + + +S L + Sbjct: 60 LLLNIKGEHRAAVDRYRALLKSDASTPAINYALSRSFYSIGVSDSARFYSERSVKLDPSN 119 Query: 103 VQY---------SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 Y Y AA L + +T P +S + + DQ Sbjct: 120 TYYLRYLAELSHQMTDYTYAAELYQRLVTLEPGRPE--------NLSLL-AVEYLSADQ- 169 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR-----------NQLAA----KE---VE 195 + L I+ + A+ + + N+L KE + Sbjct: 170 -PEKALAVFQEILRIDPKNE-TTQAQVLLLEIKLRHYQNAIGTLNELVEQGDGKEKLRLT 227 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYS 221 +G YL+ G+Y +A F+ V+ + Sbjct: 228 LGELYLQTGQYESAFKSFRDVIDDNP 253 >gi|90418691|ref|ZP_01226602.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gi|90336771|gb|EAS50476.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 360 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 35/100 (35%), Gaps = 9/100 (9%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 Y A I + +VGW+R + + Y A+ ++ +A Sbjct: 29 YILAAVILVVVITAAVVGWDRYQT--------AQANASGDAYLAALQLARDGKPDEAITA 80 Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + + D + + + V + GK+ +A + ++ Sbjct: 81 LDALAAD-SYGAYPDLARMSIGGVYQAQGKFDEAVAAFDK 119 >gi|26342579|dbj|BAC34946.1| unnamed protein product [Mus musculus] Length = 721 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 20/99 (20%) Query: 62 EKAVLFLKEQNFSKAYEYF--------NQCSRDFPFAGVARKS-----LLMSAFVQYSAG 108 ++ + + +A F A KS L + + G Sbjct: 566 NTGIILMNQGKTEEARRTFLKCSEIPDENLKD-----PHAHKSSVTSCLYNLGKLYHEQG 620 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYY-LVGMSYAQMIR 146 +Y++A S+ E I + P Y ++G +Y ++ + Sbjct: 621 RYEEALSVYREAIQKMPRH-FAPQSLYNMMGEAYMRLSK 658 >gi|332705486|ref|ZP_08425564.1| hypothetical protein LYNGBM3L_07980 [Lyngbya majuscula 3L] gi|332355846|gb|EGJ35308.1| hypothetical protein LYNGBM3L_07980 [Lyngbya majuscula 3L] Length = 810 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 27/66 (40%), Gaps = 3/66 (4%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A L+E +A + F Q + +P + + + A G QA ++ + Sbjct: 85 RAFNLLREGRVEEAIKEFEQAVQRYPQS---IDAKIGLAIAYRRQGLIDQAWDAYQQVLA 141 Query: 123 QYPESK 128 Q P ++ Sbjct: 142 QDPTNE 147 >gi|332665441|ref|YP_004448229.1| sporulation domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332334255|gb|AEE51356.1| Sporulation domain-containing protein [Haliscomenobacter hydrossis DSM 1100] Length = 687 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 43/122 (35%), Gaps = 32/122 (26%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ--CSRDFPFAGVARKSLLMSAFVQYSAGKY 110 + + +++ + + N+ +A ++F + P +++ + Y Y Sbjct: 19 NAQTAKKLMRQGEDAFTKGNYVQAADFFEKSWVKGKKP------EAVFKAGEAYYLLRNY 72 Query: 111 QQAASLG-------EEYITQYPESKNVDYVYYLVGMSYAQMI-RDVPYDQRATKLMLQYM 162 ++A+ +++ P LVG+ YA+ + +D YD+ Sbjct: 73 RKASEAYLNVKDKNDQF----P----------LVGLKYARSLKQDGQYDK--ASKAFSDF 116 Query: 163 SR 164 Sbjct: 117 RD 118 >gi|148733166|gb|ABR09241.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 38 [Homo sapiens] Length = 1269 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 38/141 (26%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYXL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|300786250|ref|YP_003766541.1| hypothetical protein AMED_4366 [Amycolatopsis mediterranei U32] gi|299795764|gb|ADJ46139.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] Length = 1052 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 39/137 (28%), Gaps = 17/137 (12%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A+ N A F + P A + A + AG+ +A + + I Sbjct: 774 RALAHRDSGNHGLAMADFARALEINPEADWIFR---DRAQTHHLAGRLAEALADYDRTIE 830 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + + V D + L ++R+ E + + Sbjct: 831 L---DPEYSWAVRQRAL--------VLRDLGRLEEALTSLTRLAEADPATAWRW--CDRG 877 Query: 183 TVGRNQLAAKEVEIGRY 199 + +L E + + Sbjct: 878 AILH-RLGRFEEAVADF 893 >gi|257093693|ref|YP_003167334.1| type IV pilus biogenesis/stability protein PilW [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046217|gb|ACV35405.1| type IV pilus biogenesis/stability protein PilW [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 267 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 32/276 (11%), Positives = 86/276 (31%), Gaps = 41/276 (14%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDS-----VTDVRYQREVYEK-AVLFLKEQN 72 L AL + + + + + + +DS D R + +++ + L+L+ N Sbjct: 6 LATVALLCLGACSSTTVAPTAKAKAAEDEVDSRRPTPPRDARTRAKLHTELGSLYLQSGN 65 Query: 73 FSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + A + P + ++L + + + A + ++ ++ Sbjct: 66 LAVALQELLIAIDIDPDYGKAYGTRAL-----AHFGIRELELADRDFQRALSIDRNDPDI 120 Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK-----------GAR 179 +Y + + + + + + + Y+ Sbjct: 121 S-------NNYGWFLCQIGRGKEGITYLQRALKDPLYETPERAYLNAGGCYATLGDLDRA 173 Query: 180 FYVTVGRNQLA----AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 +LA E+++ Y +RG+ A + ++ E EA+ +V Sbjct: 174 ETFVQQSLRLAPGNPQAELQLANIYYRRGDLQLANEQLASLVRK---TEPNAEALWLMVR 230 Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 +L + ++ ++P E L+K Sbjct: 231 VERSLGNRQAEARYSAQLRRKFPLSP---EAEELLK 263 >gi|255065140|ref|ZP_05316995.1| tetratricopeptide repeat protein [Neisseria sicca ATCC 29256] gi|255050561|gb|EET46025.1| tetratricopeptide repeat protein [Neisseria sicca ATCC 29256] Length = 627 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 76/215 (35%), Gaps = 44/215 (20%) Query: 64 AVLFLKEQNFSKA------YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 A L ++ N A + + + + ++ L F Q+A S Sbjct: 386 ASLEAEQGNGKAALAEARRAQSLPEQEGRYFGSKELQRVTL---FALSKHDNLQEALSEL 442 Query: 118 EEY---ITQYPES-KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + I++ P++ + + V Y M Y D DQ + + R+VE ++ Sbjct: 443 NKMLPKISRQPDAMEQLPDVLYQRAMIY-----DRMGDQG---KAIADLRRVVELAPDNA 494 Query: 174 YVKGA---------RFYVTVGRNQL-AAKEVE---------IGRYYLKRGEYVAAIPRFQ 214 A + + + AA ++E +G Y + + A+P Q Sbjct: 495 NGLNALGYILLSPTKKNLDEAFKLIQAAYQIEPENPAINDSLGWAYFLKDDVQTALPYLQ 554 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 Y DAE A A L EA A ++A+++ Sbjct: 555 YAFEKYPDAEVA----AHLGEALWASGEQEKAKKI 585 >gi|228905964|ref|ZP_04069859.1| hypothetical protein bthur0013_1540 [Bacillus thuringiensis IBL 200] gi|228937472|ref|ZP_04100116.1| hypothetical protein bthur0008_1560 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970360|ref|ZP_04131017.1| hypothetical protein bthur0003_1560 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228976930|ref|ZP_04137340.1| hypothetical protein bthur0002_1560 [Bacillus thuringiensis Bt407] gi|229077535|ref|ZP_04210179.1| hypothetical protein bcere0023_2450 [Bacillus cereus Rock4-2] gi|228705735|gb|EEL58077.1| hypothetical protein bcere0023_2450 [Bacillus cereus Rock4-2] gi|228782782|gb|EEM30950.1| hypothetical protein bthur0002_1560 [Bacillus thuringiensis Bt407] gi|228789352|gb|EEM37274.1| hypothetical protein bthur0003_1560 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228822191|gb|EEM68175.1| hypothetical protein bthur0008_1560 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228853651|gb|EEM98413.1| hypothetical protein bthur0013_1540 [Bacillus thuringiensis IBL 200] gi|326937963|gb|AEA13859.1| hypothetical protein CT43_CH0166 [Bacillus thuringiensis serovar chinensis CT-43] Length = 254 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 5/58 (8%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQ 71 + K L +AV VG + ++ V+ ++E+ + KA K + Sbjct: 1 MKKLILISSLVLAVGLGVGCSNEKTKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNE 58 >gi|220909066|ref|YP_002484377.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 7425] gi|219865677|gb|ACL46016.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425] Length = 293 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 27/187 (14%), Positives = 58/187 (31%), Gaps = 34/187 (18%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 S + +D + + V FL ++ + +A F + P Sbjct: 125 AALAIASCKKAVELKPSDAQTHLFL---GVAFLAQRQWQRAEMSFRKTLALDPNH---VD 178 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 + + + K +A + I P+ N+ Y +G+ D Q Sbjct: 179 AYYQLGYALLAQEKLSEAEAAFRRSIAMEPQ-ANLTY----IGL------GDALVAQEQF 227 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + + + ++R P + R +G Y ++ + AI +Q Sbjct: 228 EAAISAYRQSIQRVPAYP--------LAYLR---------LGNLYTRQNRWAEAIAIYQQ 270 Query: 216 VLANYSD 222 V+ Y + Sbjct: 271 VVKIYPN 277 >gi|149919660|ref|ZP_01908138.1| hypothetical protein PPSIR1_03293 [Plesiocystis pacifica SIR-1] gi|149819431|gb|EDM78861.1| hypothetical protein PPSIR1_03293 [Plesiocystis pacifica SIR-1] Length = 283 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 29/101 (28%), Gaps = 15/101 (14%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY---EKAVLFLKEQNFSKAYEYFNQCS 84 ++ +VG + + + E + E+AV + + +A E F + Sbjct: 14 LALCTATVVGAPTAHASLAIQPAESGAAPAGEAHRFTERAVADFEAGRYEQAVENFER-- 71 Query: 85 RDFPFAGVARKS----LLMSAFVQYSAGKYQQAASLGEEYI 121 A L V AG A ++ Sbjct: 72 ------AYALDGNVNNLFNIGRVYEEAGDLPAAIDYYTRFL 106 >gi|118365491|ref|XP_001015966.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89297733|gb|EAR95721.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 3373 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 66/222 (29%), Gaps = 44/222 (19%) Query: 47 YLDSVTDVRYQRE--VYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFV 103 YL+ D E + +++ +++ + A + + + + L Sbjct: 487 YLNQALDKSPGNEEFLVQRSNIYVDIGKYQDAIDDLTEALKKK----PLDPQVLYKRGLA 542 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDY------VYYLVGMSYAQMIRDVPYDQRATKL 157 Y ++++A + +N Y ++Y +G+SY+ M Sbjct: 543 FYKNKQFEKAIKDL--FRAL----ENKPYYSYESDIHYHLGISYSNM-EIYERSIEPLSK 595 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 +Q S Y + + YL GEY ++ F V+ Sbjct: 596 AIQL----------SKYEP------CYIHER--------AKSYLLVGEYQKSVDDFTRVI 631 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 HA +++ L E E + P+ Sbjct: 632 ELQPRNPHAYFGRGFALKSLKKYELASEDFEKAKELDPNNPK 673 >gi|21230813|ref|NP_636730.1| hypothetical protein XCC1356 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769188|ref|YP_243950.1| hypothetical protein XC_2882 [Xanthomonas campestris pv. campestris str. 8004] gi|188992335|ref|YP_001904345.1| hypothetical protein xccb100_2940 [Xanthomonas campestris pv. campestris str. B100] gi|21112414|gb|AAM40654.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574520|gb|AAY49930.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] gi|167734095|emb|CAP52301.1| Putative membrane protein [Xanthomonas campestris pv. campestris] Length = 251 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 40/130 (30%), Gaps = 19/130 (14%) Query: 64 AVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A L + ++++A E+F + +L A Q+ G+ Q + I Sbjct: 95 AETLLAQGDYAQAAEHFQGALRGLY---RDDLHLMLGLAKAQFGLGQPAQTRQTLDALIA 151 Query: 123 QYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P ++ D ++ Y + D L + + Y + AR Sbjct: 152 ANPTFRSHDGHLLYARAV----------EDSGDIDAALHEYETLAQGYP----GEEARVR 197 Query: 182 VTVGRNQLAA 191 + A Sbjct: 198 YAQLLQRTAR 207 >gi|116748131|ref|YP_844818.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116697195|gb|ABK16383.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter fumaroxidans MPOB] Length = 626 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 84/257 (32%), Gaps = 35/257 (13%) Query: 7 RAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66 R + + + ++ +L +F + W + ++ ++ +Y AV Sbjct: 285 RFLEKHQQHIPKAFQSSLMLFLADLNTQTKNWAKAATS-YEKAIKAGIKDPDVLYNLAVT 343 Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 + + + KA + + + P KS L +Q G QA S E + + P+ Sbjct: 344 YQQSDDPDKAIQALEKYLQKNPGD---TKSWLQLGELQEKKGALTQARSTYEAMLQKNPQ 400 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 ++ + I + D+ A + Q ++ T R Sbjct: 401 NRE--------ALVRLVAILEKGKDKGALQAAYQKLAA------------------TQPR 434 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 N+ + + Y +Y A F+ V+A E+ L++ Y A Sbjct: 435 NKTIQHNLGV--LYYDARKYDKAAACFEAVVALDPK---DVESRKYLLDIYRKQKNDKAA 489 Query: 247 REVVSLIQERYPQGYWA 263 V+ + + P+ Sbjct: 490 TAVIQSLAQLDPKNTSY 506 >gi|297268736|ref|XP_001115675.2| PREDICTED: prolyl 4-hydroxylase subunit alpha-3-like [Macaca mulatta] Length = 567 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 24/73 (32%), Gaps = 10/73 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQ 111 ++ + ++ A + + F + +L AF + AG Sbjct: 185 FQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFQAGNVS 244 Query: 112 QAASLGEEYITQY 124 A SL E++ Y Sbjct: 245 CALSLSREFL-LY 256 >gi|291569299|dbj|BAI91571.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 530 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 23/203 (11%), Positives = 52/203 (25%), Gaps = 41/203 (20%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ A L++ +A +NQ + P + GK +A + + Sbjct: 6 FDTANQLLRKGQLDEAIASYNQAIAESPQSAW---YYHNLGEALSQQGKIDEAIAAYRQA 62 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS-------- 172 P S + + Q + + +E + Sbjct: 63 TELNPNSAW-----------SYDNLGTLLNQQGNLPEAVSCFRKAIELDPDFSEFYHNLA 111 Query: 173 ---------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 + A +G+ Y ++ +Y A+ ++ L Sbjct: 112 LVLIKEGRLEEAVSLLQKAIELKADDAELYHSLGKAYQQQQQYSEAVTAYRQGLELNP-- 169 Query: 224 EHAEEAMARLVEAYVALALMDEA 246 + Y++L EA Sbjct: 170 --------YWSDCYLSLGQTLEA 184 >gi|301098252|ref|XP_002898219.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262105282|gb|EEY63334.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 661 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 26/106 (24%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153 + Y +Y QA E+++ P+ Y G + ++ R Sbjct: 92 QFSRGYAYYRLQQYAQA---AEDFLECSRSDPDH--AASALYNRGCALYKLRRHA----- 141 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 ++ +S+ ++ + +P +R V KE+ GR+ Sbjct: 142 ---EAVKDLSKALKLDSKNPLFVESRARVL--------KEM--GRF 174 >gi|300024151|ref|YP_003756762.1| hypothetical protein Hden_2645 [Hyphomicrobium denitrificans ATCC 51888] gi|299525972|gb|ADJ24441.1| Tetratricopeptide TPR_2 repeat protein [Hyphomicrobium denitrificans ATCC 51888] Length = 239 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 14/126 (11%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++A LF + KA + P A + A+++Y Y A + Sbjct: 124 DRAELFSSKNENDKALPLLDAAVDLAP--DYAE-AWSHRAYIEYRLNNYPAALGDLRRAL 180 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P L GM+ + K L+ ++++ + N + AR Sbjct: 181 ALDPNHFRA-----LDGMA------KILTQMGEKKAALEAYDQLLKIHPNIEGAETARDE 229 Query: 182 VTVGRN 187 + Sbjct: 230 LKKAVE 235 >gi|225181010|ref|ZP_03734457.1| TPR repeat-containing protein [Dethiobacter alkaliphilus AHT 1] gi|225168207|gb|EEG77011.1| TPR repeat-containing protein [Dethiobacter alkaliphilus AHT 1] Length = 319 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 7/74 (9%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ A LK+ +A + + P + R A + Y A + QA + Sbjct: 135 QLVAAAEAALKKGLPQEAAQNYKAALELKPAAGSLYQR-----IADLYYDAEDFSQAVTA 189 Query: 117 GEEYITQYPESKNV 130 +Y+ P +V Sbjct: 190 YHKYLQHNPNDHSV 203 >gi|203284115|ref|YP_002221855.1| hypothetical protein BDU_193 [Borrelia duttonii Ly] gi|201083558|gb|ACH93149.1| uncharacterized conserved protein [Borrelia duttonii Ly] Length = 380 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 76/212 (35%), Gaps = 36/212 (16%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 K++NF KA Y+ +C +L S G Y++A + EEY+ +S+ Sbjct: 70 KKRNFDKAIIYYQKCLAKHSNNNY---ALFGLGDCYRSLGDYKKATDVWEEYLKY--DSE 124 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180 N+ V V SY ++ + + Q R++E ++ Y + Sbjct: 125 NIT-VLTRVASSYRKL--------KNFQKSRQSYLRVLELVPDNDYALVGIGHLYYDFKE 175 Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 Y + L E+ IG Y K E+ I F+ L + + A Sbjct: 176 YKEALKYWLKMYEINQVKIDVRVLTSIGNCYRKLKEFGKGIYFFKRALEI---SPNNFYA 232 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + L + Y EA + I +R P+ Sbjct: 233 IFGLADCYRGSKEYAEALKYWLTIIDRDPKNN 264 >gi|253698929|ref|YP_003020118.1| hypothetical protein GM21_0276 [Geobacter sp. M21] gi|251773779|gb|ACT16360.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21] Length = 624 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 45/224 (20%) Query: 61 YEKAVLFLKE-----QNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYSAGKYQQ 112 Y A L E + + A + + P + A + +Y Sbjct: 372 YGDARRRLAEIHSVRGDLNAAIAQYRELVSRHGDNPLSYY------KLARLYEQGRQYAD 425 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A + + I +S+ Q I + ++ + +++ ++ Sbjct: 426 AIAAYSKAIELDQDSEVA-----------HQGIARLYLKRKQAEEAEKHLLEVLRLDPKH 474 Query: 173 PYVKGA-------------RFYVTVGRNQL----AAKEVEIGRYYLKRGEYVAAIPRFQL 215 + + +L A + +G Y RG A ++Q Sbjct: 475 AEARELLISLYVKARRYDDTEKLLKASAELNPDSANDQYRLGVIYAFRGNNDGAREQYQK 534 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 L D A+ L + Y+ L ++ARE ++ ++ P Sbjct: 535 ALELKPD---HARALNALGKLYLRLGQKEKAREALAAARKADPD 575 >gi|189425157|ref|YP_001952334.1| hypothetical protein Glov_2098 [Geobacter lovleyi SZ] gi|189421416|gb|ACD95814.1| Tetratricopeptide TPR_2 repeat protein [Geobacter lovleyi SZ] Length = 566 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 69/234 (29%), Gaps = 44/234 (18%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 D D V + Y +A LF E N +A Q P Sbjct: 15 AACGSVRPADSPEDGVASAHLHSGLGAYAQARLFWNEGNVEQALILTRQAQTADPVTPYP 74 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQ 152 L+ A + +G+ Q + + + I P DY YL+G S + Sbjct: 75 I---LLEAEILLKSGRVQDSLAAVDRAIKVAP-----DYRPSYLLGGSIMSTM------- 119 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE------------------- 193 TK Y+ V + A ++ QL E Sbjct: 120 GKTKEAAAYLRNAVRLEPG---KEDAVLHLVTTLMQLFEYEESVTVLKSLIKVKPESAVG 176 Query: 194 -VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 + + Y + Y +I +Q L + +A + +Y AL D+A Sbjct: 177 NYYLAKVYSQMKLYRESIGYYQKALELRPE---FIQATIDMAISYEALGEYDKA 227 >gi|159027046|emb|CAO89232.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 970 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 23/142 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGE 118 Y + + F +A +++ P F + L + G+Y++A + + Sbjct: 214 YNRGIALRNLGRFEQAIASYDRALEFKPDFHEAWTNRGL-----ALKNLGRYEEAIASYD 268 Query: 119 EYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + P+ + +Y G++ + R + + +E + Y + Sbjct: 269 RALEIKPDCHE----AWYNRGIALHNLGRFA--------EAIASYDQALEIKPD--YHEA 314 Query: 178 ARFYVTVGRNQLAAKEVEIGRY 199 N L E I + Sbjct: 315 WYNRGIALHN-LGRFEQAIASW 335 >gi|311745836|ref|ZP_07719621.1| putative tetratricopeptide TPR_2 [Algoriphagus sp. PR1] gi|126576039|gb|EAZ80317.1| putative tetratricopeptide TPR_2 [Algoriphagus sp. PR1] Length = 221 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 26/60 (43%), Gaps = 3/60 (5%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + E+ + + + +Q++S+A YF++ P A + + K+++A Sbjct: 5 PSEEELLQAGIEKMDQQSWSEAIPYFDRALEQNPENATALNAK---GVALFQQEKFEEAI 61 >gi|86159752|ref|YP_466537.1| hypothetical protein Adeh_3333 [Anaeromyxobacter dehalogenans 2CP-C] gi|85776263|gb|ABC83100.1| tetratricopeptide repeat protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 274 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 61/189 (32%), Gaps = 46/189 (24%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY-EYFNQCSRDFPFAGVARK 95 GW ++ + + D A ++ +++ + +A EY R P Sbjct: 26 GWLDEAINEFHKAIELDPSSAHAHDNLATVYSEKKRYREALNEYLTAL-RLEP------- 77 Query: 96 SLLMSAFVQYSAG------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 SA Y+ A + ++ I P+ + + +G++ A Sbjct: 78 ---DSATAHYNLACFLATHGPDMAIAEYQDAIQLEPDHPD---AHLNLGLTLA------- 124 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 DQ T+ ++ + +E P+ E+ + G+Y AA Sbjct: 125 -DQGKTEEAVKELGVAIELEPTDPFP---------------RHEL--AGLLMDEGDYRAA 166 Query: 210 IPRFQLVLA 218 I + V+ Sbjct: 167 IAHLKEVVR 175 >gi|116620738|ref|YP_822894.1| peptidase C14, caspase catalytic subunit p20 [Candidatus Solibacter usitatus Ellin6076] gi|116223900|gb|ABJ82609.1| peptidase C14, caspase catalytic subunit p20 [Candidatus Solibacter usitatus Ellin6076] Length = 911 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 38/140 (27%), Gaps = 31/140 (22%) Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 KY A + I P Y Y +G++Y +M R + Sbjct: 598 QKKYTDAIDSLRQSIRLEPR---AAYAYNALGIAYLEMARYDD--------AAHAFQDAI 646 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 +R Y R + + Q + + YVAA + + Sbjct: 647 DRAPLWAYP---RHNLALAHWQQGQYRLAVAD-------YVAA-------MEKAPTYFYL 689 Query: 227 EEAMARLVEAYVALALMDEA 246 + L Y L EA Sbjct: 690 PYNLGLL---YATLNQQKEA 706 >gi|327479191|gb|AEA82501.1| HemY protein [Pseudomonas stutzeri DSM 4166] Length = 406 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 8/71 (11%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA---RKSLLMSAFVQYSAGKYQQAASLGEE 119 A + ++++ E + P A +A ++ L A G+Y +A + Sbjct: 125 AARAANELGEYAQSDELLQKAREREPEAALAIGLTQAQLQIA-----RGQYVEARASLSA 179 Query: 120 YITQYPESKNV 130 + +P V Sbjct: 180 LQSDHPRHPYV 190 >gi|322827979|gb|EFZ31941.1| DNA-J protein, putative [Trypanosoma cruzi] Length = 551 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 33/177 (18%) Query: 50 SVTDVRYQREVY----------EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL- 98 S ++R+ E+Y E FL+E++F+ A +R FP A + + Sbjct: 116 SKEEIRHVHELYLNAEEGSKAIENGQRFLEERDFAAAERCLASTARSFP--DCAPVAFIF 173 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A + ++ + ++ E + Y Y+ +S Q K+ Sbjct: 174 GEARA---PRQPEEVNRALVRFAQKHEEDPS--Y-LYVRALSNYY------RGQDGFKVA 221 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-----GEYVAAI 210 + + +E ++ + V + KE Y KR Y AAI Sbjct: 222 QGILRQALELDPDNRKASALLKMIRVMESH---KERGNAAYREKRYRDAINAYAAAI 275 >gi|322495154|emb|CBZ30458.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 425 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 73/243 (30%), Gaps = 39/243 (16%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQC--SR 85 A +G + T ++E+ E +A ++ FS A E + + S+ Sbjct: 51 ASSGGIGSNASTGDSSTGTDATADLSEKELIELNKEAAEAFEKGEFSSAIEAWEKVAQSK 110 Query: 86 DF-PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY-----LVGM 139 P + L A G + L E S+++ Y GM Sbjct: 111 QHTPNSPTLMSCLNNLACAYGEMGDSIRKLKLLER-------SRDLVQAVYGTDHPQYGM 163 Query: 140 SYAQMI---RDVPYDQRATKLMLQYMSRIVERY-TNSPYVKGARFYVTVGRNQLAAKEVE 195 M ++ +L+ Q ++ +R+ V + L E Sbjct: 164 VLYNMACAKEEMGLYPDMKQLLEQSLALHEKRFNPRHAKVGRVLLLLAAAHGHLGEHE-- 221 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE--AMARLVEAYVALALMD----EAREV 249 + R ++ + EH + AM L AY A ++ A+ Sbjct: 222 ---------AQLRTAERAYEIVKRHCGPEHVQTTIAMMTLGRAYGAAGQVERQLQLAQAA 272 Query: 250 VSL 252 S+ Sbjct: 273 YSI 275 >gi|300087339|ref|YP_003757861.1| preprotein translocase subunit SecA [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527072|gb|ADJ25540.1| preprotein translocase, SecA subunit [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 1072 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 17/121 (14%) Query: 149 PYDQRATKLMLQYMSRIVER----YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204 T+ +V R +S Y F + RN LAAKE +Y + Sbjct: 322 ERQAELTEEGWIKFENLVRREGLLKADSVYDPQNAFLIRHLRNALAAKE-----FYHRDR 376 Query: 205 EYV----AAIPRFQLVLANYSDAEHA----EEAMARLVEAYVALALMDEAREVVSLIQER 256 +YV R +++ ++ + E + + +EA + + E + S+ + Sbjct: 377 QYVVDRDPDGGRGIVIVDEFTGRKMVGRRYSEGLHQAIEAKEGVKIRQETKTYASITIQN 436 Query: 257 Y 257 Y Sbjct: 437 Y 437 >gi|291403762|ref|XP_002718007.1| PREDICTED: tetratricopeptide repeat domain 6 [Oryctolagus cuniculus] Length = 1265 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 35/88 (39%), Gaps = 3/88 (3%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94 L+G ++ + +D + Y + ++ + FS+A +YF++ + P AR Sbjct: 1105 LMGQKQNAMKDYQAAISLNPAYSLAYFNAGNIYFHHRQFSQASDYFSKALKFDPENEYAR 1164 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + A KY++A I Sbjct: 1165 ---MNRAVAHMLLKKYEEAKDDFARVID 1189 >gi|224369058|ref|YP_002603222.1| tetratricopeptide repeat protein (TPR family protein) [Desulfobacterium autotrophicum HRM2] gi|223691775|gb|ACN15058.1| tetratricopeptide repeat protein (TPR family protein) [Desulfobacterium autotrophicum HRM2] Length = 787 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 81/262 (30%), Gaps = 70/262 (26%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRD 86 F + F++G + + +R+ + + + ++ A ++E+N A + ++ Sbjct: 106 FRLGQVFILGRQTKKARETAQNILAKQPENTKALHLLATAQVQERNIDAAIKTLDKAISI 165 Query: 87 FPFAGVARKSLLMSAFV------QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 P + Y ++++ + YL +S Sbjct: 166 EPGNAH--------LYAFLGFLFYYDKNDFEKSEAA------------------YLKAIS 199 Query: 141 YAQMIRD-------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV--GRNQLAA 191 I + + D++ + + + + ++ RNQL Sbjct: 200 IDNSIDEPYEELLAIYKDKKMFEKAESLLVYLTNT-PKN-HIPKLSKLADFYASRNQLKK 257 Query: 192 KE------------------VEIGRYYLKRGEYVAAIPRFQLV--LANYSDAEHAEEAMA 231 E +G +Y++ Y +A+ F V + N D Sbjct: 258 AEKIYLQAVQESNKKDYLPLYNLGTFYVRTKNYKSAVNSFNKVLSIKNDPDIRSD----- 312 Query: 232 RLVEAYVALALMDEAREVVSLI 253 L Y L ++A+E ++I Sbjct: 313 -LANVYFELKEFEKAKEQATII 333 >gi|240981045|ref|XP_002403605.1| SET and MYND domain-containing protein (SMYD), putative [Ixodes scapularis] gi|215491387|gb|EEC01028.1| SET and MYND domain-containing protein (SMYD), putative [Ixodes scapularis] Length = 770 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 39/121 (32%), Gaps = 21/121 (17%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQ--CSRDFPFAGVAR--KSLLMSAFVQ----- 104 E+ + L + ++KA E + Q S FP A + F Sbjct: 66 WEKASELRSEGNLCFNRKQYAKAAELYTQSVLSAPFPDTPDAEGHSEEMSLGFANRSAAF 125 Query: 105 YSAGKYQQAASLGE-EYITQYPESKNVDYVYYLV-GMSYAQMIRDVPYDQRATKLMLQYM 162 + AGKY+QA + YP Y YL G Y ++ + L+ Sbjct: 126 FHAGKYKQALCDVRYAFELGYPVHLR--YKLYLRKGQCYLRL--------GKPREALENF 175 Query: 163 S 163 Sbjct: 176 D 176 >gi|126644183|ref|XP_001388227.1| phosphoprotein phosphatase related [Cryptosporidium parvum Iowa II] gi|126117300|gb|EAZ51400.1| phosphoprotein phosphatase related, putative [Cryptosporidium parvum Iowa II] Length = 525 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 16/137 (11%), Positives = 38/137 (27%), Gaps = 29/137 (21%) Query: 63 KAVLFLKEQNFSKAYEYFN-QCSRDFPFAG---------VARKSLLMSAFVQYSAGKYQQ 112 K K +++A EY+ + ++L + Sbjct: 20 KGNESFKSGKYNEAIEYYTLAIKTSQASNETQNKNLHIYYSNRAL-----CHIRLENFGS 74 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A E I P YY G++Y +++ L + ++ + Sbjct: 75 AIEDSGESIKCCPSFSK---AYYRRGIAYFNLLKYS--------LARKDFMMVLNL---T 120 Query: 173 PYVKGARFYVTVGRNQL 189 + A+ + + + Sbjct: 121 QNDRDAQSKIQICTKLI 137 >gi|4102831|gb|AAD01597.1| peptidyl-prolyl cis-trans isomerase [Brugia malayi] Length = 426 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 13/136 (9%), Positives = 40/136 (29%), Gaps = 19/136 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAAS 115 +++ + L + + E R +LL++ + V + + Sbjct: 266 FKQGKMRLPAAKYMRVIELLEYEKSLENETKSRRDALLLAGYLNSALVYAKQDETVECIK 325 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 ++ + P+ Y ++ + I + +++E ++ Sbjct: 326 NCDKALEVDPKCVK---ALYRKALALQEQID--------ADEAIIKYKKVLEYEPDNK-- 372 Query: 176 KGARFYVTVGRNQLAA 191 A + + LA Sbjct: 373 -AAIAQIAACKKMLAE 387 >gi|15893695|ref|NP_347044.1| TPR repeat-containing serine/threonin protein kinase [Clostridium acetobutylicum ATCC 824] gi|15023256|gb|AAK78384.1|AE007555_4 Serine/threonine protein kinase fused to TPR repeats domain [Clostridium acetobutylicum ATCC 824] Length = 657 Score = 36.6 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 22/111 (19%) Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y + +QN KA EYF ++ K+ + G+Y Q+ Sbjct: 326 YNNIIENGSKQNGDKAVEYFKQAVDKN----SSNPKAYIKIIDTYLENGEYDQSID---- 377 Query: 120 YITQYPESKNVD-----YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +I +K + + + +GM+Y D + QY ++I Sbjct: 378 FIETNLNNKQSELLKDNELLFKIGMAYF--------DDESYAKAYQYFNKI 420 >gi|332827935|gb|EGK00657.1| hypothetical protein HMPREF9455_02931 [Dysgonomonas gadei ATCC BAA-286] Length = 661 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 L A + AG Y+QAA +E++ YP ++ Sbjct: 97 VTLQYARSLHKAGDYKQAAKYYQEFLQLYPGNQFA 131 >gi|228950716|ref|ZP_04112849.1| hypothetical protein bthur0006_1550 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228808952|gb|EEM55438.1| hypothetical protein bthur0006_1550 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 254 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 5/58 (8%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQ 71 + K L +AV VG + ++ V+ ++E+ + KA K + Sbjct: 1 MKKLILISSLVLAVGLGVGCSNEKTKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNE 58 >gi|227536270|ref|ZP_03966319.1| flagellar motor protein MotB [Sphingobacterium spiritivorum ATCC 33300] gi|227243877|gb|EEI93892.1| flagellar motor protein MotB [Sphingobacterium spiritivorum ATCC 33300] Length = 301 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 28/90 (31%), Gaps = 10/90 (11%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSS----RDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74 + + L I ++ FL + Y T+ R + Y++ L L E Sbjct: 2 MKQSVLPISILLSGLFLTSCVSSGKFKSLQTDYDKLQTEHRDLAQKYQQGQLDLTEGRTR 61 Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + + A + L A+ Sbjct: 62 --IKSLEE---QLAY-EKANNAQLKEAYAN 85 >gi|254421497|ref|ZP_05035215.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC 7335] gi|196188986|gb|EDX83950.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC 7335] Length = 322 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 17/131 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y+ +L+L +Q +S A + F + +D+ A A Sbjct: 203 YQIGLLYLSQQQYSNAQKAFENAIELDKDYAEAHY------NLGVSFVRQNILAPAVIAF 256 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + I P N + YY +++A + R A K +L S I NS + Sbjct: 257 DAAINLQP---NFAHAYYAKALAFADLQRY-----EAAKELLTTASNIYLTQGNSEWATI 308 Query: 178 ARFYVTVGRNQ 188 A+ +T+ +Q Sbjct: 309 AQNQITLIEDQ 319 >gi|195396103|ref|XP_002056672.1| GJ11067 [Drosophila virilis] gi|194143381|gb|EDW59784.1| GJ11067 [Drosophila virilis] Length = 947 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 8/116 (6%) Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-----GRYYLKRGE 205 D A + + + E + + + + Y + KE+ + YLK + Sbjct: 5 DTTAAAEAISHKDKGNEAFKAAKWTDAVQEYSAAIKLGAKHKELPVFYKNRAAAYLKLEK 64 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 Y A+ L + +A+ R +AY AL +EA + + + + P Sbjct: 65 YTEAVDDCNESLRLGPN---DPKALFRRAQAYEALNKPEEAYKDATALFKADPGNK 117 Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 15/136 (11%), Positives = 40/136 (29%), Gaps = 21/136 (15%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-----MSAFVQYSAGKYQQAASL 116 +K K ++ A + ++ + A+ L A KY +A Sbjct: 17 DKGNEAFKAAKWTDAVQEYSAAIKLG-----AKHKELPVFYKNRAAAYLKLEKYTEAVDD 71 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 E + P + +Y + + + + + + + + V+ Sbjct: 72 CNESLRLGPNDPK---ALFRRAQAYEALNK--------PEEAYKDATALFKADPGNKSVQ 120 Query: 177 GARFYVTVGRNQLAAK 192 + + + AA+ Sbjct: 121 PMLQRLHLIVQENAAR 136 >gi|168702109|ref|ZP_02734386.1| TPR repeat [Gemmata obscuriglobus UQM 2246] Length = 489 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 37/137 (27%), Gaps = 26/137 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + + F+KA + + R P + + + +Y +A +E I Sbjct: 230 SRGNVLSDRRQFAKAIADYTEVIRRSPQSSL---AYCNRGHAYNDTKEYDKALKDLDESI 286 Query: 122 TQYPE----SKNVDYVYYLVG---MSYAQMIRDVPYDQR------------ATK----LM 158 P +Y G + A + D R A K Sbjct: 287 RLNPRYVPAHLTRGKAWYGKGEHDKAIANYTEALRLDPRYISPYLHRGLAWAAKGEHDKA 346 Query: 159 LQYMSRIVERYTNSPYV 175 + S V S Y Sbjct: 347 IADYSAAVRLDPKSIYA 363 >gi|148673721|gb|EDL05668.1| aspartate-beta-hydroxylase, isoform CRA_b [Mus musculus] Length = 717 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 3/67 (4%) Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E++ KRG+ A+ F+ ++ Y + A + LA + EV+ Sbjct: 303 ELDAAEKLRKRGKIEEAVNAFEELVRKYPQSP---RARYGKAQCEDDLAEKQRSNEVLRR 359 Query: 253 IQERYPQ 259 E Y + Sbjct: 360 AIETYQE 366 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 17/80 (21%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 + + + +V +Y SP + + + LA K +R V Sbjct: 311 RKRGKIEEAVNAFEELVRKYPQSPRARYGKA---QCEDDLAEK---------QRSNEV-- 356 Query: 210 IPRFQLVLANYSDAEHAEEA 229 + + Y +A +A Sbjct: 357 ---LRRAIETYQEAADLPDA 373 >gi|148673725|gb|EDL05672.1| aspartate-beta-hydroxylase, isoform CRA_f [Mus musculus] Length = 741 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 3/67 (4%) Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E++ KRG+ A+ F+ ++ Y + A + LA + EV+ Sbjct: 327 ELDAAEKLRKRGKIEEAVNAFEELVRKYPQSP---RARYGKAQCEDDLAEKQRSNEVLRR 383 Query: 253 IQERYPQ 259 E Y + Sbjct: 384 AIETYQE 390 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 17/80 (21%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 + + + +V +Y SP + + + LA K +R V Sbjct: 335 RKRGKIEEAVNAFEELVRKYPQSPRARYGKA---QCEDDLAEK---------QRSNEV-- 380 Query: 210 IPRFQLVLANYSDAEHAEEA 229 + + Y +A +A Sbjct: 381 ---LRRAIETYQEAADLPDA 397 >gi|148673726|gb|EDL05673.1| aspartate-beta-hydroxylase, isoform CRA_g [Mus musculus] Length = 702 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 3/67 (4%) Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E++ KRG+ A+ F+ ++ Y + A + LA + EV+ Sbjct: 288 ELDAAEKLRKRGKIEEAVNAFEELVRKYPQSP---RARYGKAQCEDDLAEKQRSNEVLRR 344 Query: 253 IQERYPQ 259 E Y + Sbjct: 345 AIETYQE 351 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 17/80 (21%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 + + + +V +Y SP + + + LA K +R V Sbjct: 296 RKRGKIEEAVNAFEELVRKYPQSPRARYGKA---QCEDDLAEK---------QRSNEV-- 341 Query: 210 IPRFQLVLANYSDAEHAEEA 229 + + Y +A +A Sbjct: 342 ---LRRAIETYQEAADLPDA 358 >gi|308809489|ref|XP_003082054.1| chloroplast Toc64-2 (ISS) [Ostreococcus tauri] gi|116060521|emb|CAL55857.1| chloroplast Toc64-2 (ISS) [Ostreococcus tauri] Length = 612 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 38/141 (26%), Gaps = 23/141 (16%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119 K LK+ + A EY+ P VA +++ G Y+ Sbjct: 490 AKGNEALKKGKYQDAIEYYGVAIGKNPKNPVYVANRAM-----AHLKLGNYELCEDDCTT 544 Query: 120 YITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 I + Y Y + R V L + N+ K Sbjct: 545 AIKL-----DRKYTKAYLRRATA-----RSVG---GNYLEALMDFEEALRLEPNNSDAKR 591 Query: 178 ARFYVTVGRNQLAAKEVEIGR 198 + +A +++G+ Sbjct: 592 EVNRMKKIIG-MADPGMDVGK 611 >gi|328874966|gb|EGG23331.1| hypothetical protein DFA_05463 [Dictyostelium fasciculatum] Length = 647 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 81/236 (34%), Gaps = 54/236 (22%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA---GVARKSLLMSA 101 + +T +++ ++A + L ++N+++A E+F Q P + +++ + L S Sbjct: 181 EPEEKPMTPEEQSKDLCDQANILLWKKNYAQALEFFTQAQHLNPSSYEIPLSKAAALNS- 239 Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ------------------ 143 +G+Y+ A + + K++D + GM + Sbjct: 240 -----SGRYEDAIAECQ---------KSLDLAQEMKGMVNQKGYLPDNQDEVKEEIILRI 285 Query: 144 ---MIRDVPYDQRAT------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 M R + K QY+ + +E + NS + V L++ EV Sbjct: 286 EQMMSRSCARMATSFMGNGDYKQARQYIVQAIETF-NSAEFEEMLKMVNELIG-LSSTEV 343 Query: 195 EI----GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 + + +Y AI + VL + +A Y L A Sbjct: 344 TALYKSAKDMYRAQDYQEAIRLYTEVLQIDPNNNII---LANRAMCYNKLKQYPMA 396 >gi|298504919|gb|ADI83642.1| ABC transporter, membrane protein [Geobacter sulfurreducens KN400] Length = 340 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCS--RDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ +A + + A E + R +S + A + ++A + +A + Sbjct: 33 DALFREANDLMGAGDLPAAMEVLKKVPAPRAGEEGDAFVRSRMQIAKLHFAAKEMDEALA 92 Query: 116 LGEEYITQYPESKNV 130 E ++ YP++ Sbjct: 93 AAREVLSLYPDNSEA 107 >gi|268326096|emb|CBH39684.1| conserved hypothetical protein, containing TPR repeat [uncultured archaeon] Length = 479 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 63/183 (34%), Gaps = 50/183 (27%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYY---LVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 G+Y +A L E I P + Y YY L G Y ++ + + Sbjct: 283 GEYNKAIELCNEEIAL-PIFEWYPYAYYAYTLRGACYYEL--------GEYGKAISDFEK 333 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKE-----------------VEIGRY-------- 199 ++E Y S A Y+ + ++ A E +E+G + Sbjct: 334 VIEEY-ESELEAHAYMYLGMAHSE-AGNETEARAAFESAVDLYNVTIEVGGWVGAGTYND 391 Query: 200 ----YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL-------MDEARE 248 YL EY AIP F+ V+ + A +EAY L + D+AR+ Sbjct: 392 RGLCYLGLDEYDLAIPDFEKVIELEPNYVDAHSGKNLYIEAYKNLGIAYSASGDKDKARD 451 Query: 249 VVS 251 + Sbjct: 452 YLE 454 >gi|255014061|ref|ZP_05286187.1| TPR repeat-containing protein [Bacteroides sp. 2_1_7] Length = 707 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 71/225 (31%), Gaps = 52/225 (23%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCS 84 + ++AV F+ + + + D +T Y + ++L++ + KA +N+ Sbjct: 127 MLVNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAI 186 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQ 143 P+ A + A + Y Y+ A + E + YY+ G+ Q Sbjct: 187 EMDPY--YAP-AYGNRAILHYQMDDYKDALADLNEALRLDTRESG----YYINRGLVRYQ 239 Query: 144 MIR----DVPYDQ----------------------RATKLMLQYMSRIVERYTNSPYVKG 177 M YDQ ++ ++++ ++ Sbjct: 240 MNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQQEPDN----- 294 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 Y+ L E G+Y A+ + +VL Y Sbjct: 295 ---YMAYYNRALLRFE---------TGDYRGAVQDYDVVLKQYPT 327 >gi|254425291|ref|ZP_05039009.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC 7335] gi|196192780|gb|EDX87744.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC 7335] Length = 174 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 51/145 (35%), Gaps = 26/145 (17%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL---MSAFVQYSAGK 109 + E YE L L ++ +++A Y + ++ P A ++L + ++ + Sbjct: 49 EKGTALEYYELGSLLLDKKLYAQAAAYLKKALKELP-EEEAENAVLVHNALGYSYFAQDQ 107 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A E + P+ Y+ ++ T Q M + +E Y Sbjct: 108 FDLAIRQYNEALKIRPD--------YVTALNNL----------GHTYERKQLMPQALETY 149 Query: 170 TNS----PYVKGARFYVTVGRNQLA 190 S P + A+ R +LA Sbjct: 150 EKSLATEPANETAKRRADSLRKRLA 174 >gi|162456024|ref|YP_001618391.1| hypothetical protein sce7742 [Sorangium cellulosum 'So ce 56'] gi|161166606|emb|CAN97911.1| hypothetical protein sce7742 [Sorangium cellulosum 'So ce 56'] Length = 293 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 11/84 (13%), Positives = 34/84 (40%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106 + + + + + +A +++ + S A + + FP + + + + Sbjct: 196 QPATPSTLAAEMALLREAQDAVRDGDPSAALDRLDDLGARFPEGQLREERMAARVLALCA 255 Query: 107 AGKYQQAASLGEEYITQYPESKNV 130 AG+ +A + E + + P S ++ Sbjct: 256 AGRAPEARAEAERLLGEAPGSVHM 279 >gi|161525096|ref|YP_001580108.1| cellulose synthase domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189350160|ref|YP_001945788.1| hypothetical protein BMULJ_01316 [Burkholderia multivorans ATCC 17616] gi|160342525|gb|ABX15611.1| cellulose synthase operon C domain protein [Burkholderia multivorans ATCC 17616] gi|189334182|dbj|BAG43252.1| conserved hypothetical protein [Burkholderia multivorans ATCC 17616] Length = 1313 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 21/119 (17%) Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 YA + DV Q ++ V R + P + A + Sbjct: 760 YALELADVERAQGRYDAARDALAPFVARQPDDPDTQLALARIDE---------------- 803 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYVALALMDEAREVVSLIQERYP 258 + G AA+ R + VLA D + A+ R + A L D+A++V + ++ YP Sbjct: 804 -ESGRRAAALARVEAVLARTPDDDVVTRLAVVRRLNA---LGRPDDAQQVTAPLRAAYP 858 >gi|126731915|ref|ZP_01747719.1| TPR domain protein [Sagittula stellata E-37] gi|126707742|gb|EBA06804.1| TPR domain protein [Sagittula stellata E-37] Length = 700 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 42/120 (35%), Gaps = 13/120 (10%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 + F + FS+A+ VG Q + + + +++ +A Sbjct: 326 FAFRRGLVFSLALIG-VGLALQPGAAQASPWDDLWATPDQ---QGRAAFQAEDYGEAAAD 381 Query: 80 FN----QCSRDFPFAGVARKSLLMS-----AFVQYSAGKYQQAASLGEEYITQYPESKNV 130 F + + + + LM+ +G+++QA + +E + + PE + Sbjct: 382 FENPAWKGAAAYREGDFKTAADLMASPFNRGNALAKSGEFEQALAAYDEALARDPEDADA 441 >gi|108758662|ref|YP_631141.1| hypothetical protein MXAN_2930 [Myxococcus xanthus DK 1622] gi|108462542|gb|ABF87727.1| hypothetical protein MXAN_2930 [Myxococcus xanthus DK 1622] Length = 286 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 21/63 (33%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + A F R P + +++ A G S E +++ +P+S V Sbjct: 214 GDARGALRQFKAALRVQPRGVLDQEAQHGIAEAHRVLGDRDAERSALESFLSTHPDSPLV 273 Query: 131 DYV 133 Sbjct: 274 PSA 276 >gi|90579367|ref|ZP_01235177.1| Hypothetical fimbrial biogenesis and twitching motility protein [Vibrio angustum S14] gi|90440200|gb|EAS65381.1| Hypothetical fimbrial biogenesis and twitching motility protein [Vibrio angustum S14] Length = 252 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 29/261 (11%), Positives = 77/261 (29%), Gaps = 49/261 (18%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 +++ ++ G D + + + + +LK+ + +A E Sbjct: 5 SVYPLLSCLLFTGCATVDVVDNGKEFDAKAASEARL-NLGLNYLKDGQWERARENLEIAL 63 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES----------------- 127 R P ++ + A+ G+ A + + + P++ Sbjct: 64 RYDP--DY-YRAQISMAYYYQKVGEKDAADKMYRKVLKHSPKNGDVLNNYGVFLCSEGRY 120 Query: 128 --------KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 K ++ YY + + + Q + Y + Y + Sbjct: 121 DEAIAAFVKAIEQPYYYLISASYENAGLCSRKQGNLEAATGYFENALSHDP---YRPRSM 177 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 QLA E+E + R + + +++ L++ Sbjct: 178 L-------QLAQVEIESNNFKDAR----------VQLFKFNKRYGYTADSLWLLIQLERQ 220 Query: 240 LALMDEAREVVSLIQERYPQG 260 + ++++ L++E+YP Sbjct: 221 AGRLTQSKKYAILLKEKYPDS 241 >gi|26330882|dbj|BAC29171.1| unnamed protein product [Mus musculus] gi|123122167|emb|CAM15538.1| aspartate-beta-hydroxylase [Mus musculus] gi|123209989|emb|CAM26683.1| aspartate-beta-hydroxylase [Mus musculus] gi|123228159|emb|CAM19145.1| aspartate-beta-hydroxylase [Mus musculus] Length = 658 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 3/67 (4%) Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E++ KRG+ A+ F+ ++ Y + A + LA + EV+ Sbjct: 244 ELDAAEKLRKRGKIEEAVNAFEELVRKYPQSP---RARYGKAQCEDDLAEKQRSNEVLRR 300 Query: 253 IQERYPQ 259 E Y + Sbjct: 301 AIETYQE 307 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 17/80 (21%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 + + + +V +Y SP + + + LA K +R V Sbjct: 252 RKRGKIEEAVNAFEELVRKYPQSPRARYGKA---QCEDDLAEK---------QRSNEV-- 297 Query: 210 IPRFQLVLANYSDAEHAEEA 229 + + Y +A +A Sbjct: 298 ---LRRAIETYQEAADLPDA 314 >gi|125628659|ref|NP_075553.2| aspartyl/asparaginyl beta-hydroxylase isoform 1 [Mus musculus] gi|81913588|sp|Q8BSY0|ASPH_MOUSE RecName: Full=Aspartyl/asparaginyl beta-hydroxylase; AltName: Full=Aspartate beta-hydroxylase; Short=ASP beta-hydroxylase; AltName: Full=Peptide-aspartate beta-dioxygenase gi|26326277|dbj|BAC26882.1| unnamed protein product [Mus musculus] gi|123122168|emb|CAM15539.1| aspartate-beta-hydroxylase [Mus musculus] gi|123210001|emb|CAM26695.1| aspartate-beta-hydroxylase [Mus musculus] gi|123228167|emb|CAM19153.1| aspartate-beta-hydroxylase [Mus musculus] gi|148673722|gb|EDL05669.1| aspartate-beta-hydroxylase, isoform CRA_c [Mus musculus] gi|189442061|gb|AAI67179.1| Aspartate-beta-hydroxylase [synthetic construct] Length = 741 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 3/67 (4%) Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E++ KRG+ A+ F+ ++ Y + A + LA + EV+ Sbjct: 327 ELDAAEKLRKRGKIEEAVNAFEELVRKYPQSP---RARYGKAQCEDDLAEKQRSNEVLRR 383 Query: 253 IQERYPQ 259 E Y + Sbjct: 384 AIETYQE 390 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 17/80 (21%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 + + + +V +Y SP + + + LA K +R V Sbjct: 335 RKRGKIEEAVNAFEELVRKYPQSPRARYGKA---QCEDDLAEK---------QRSNEV-- 380 Query: 210 IPRFQLVLANYSDAEHAEEA 229 + + Y +A +A Sbjct: 381 ---LRRAIETYQEAADLPDA 397 >gi|34556945|ref|NP_906760.1| hypothetical protein WS0523 [Wolinella succinogenes DSM 1740] gi|34482660|emb|CAE09660.1| conserved hypothetical protein [Wolinella succinogenes] Length = 319 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 50/153 (32%), Gaps = 27/153 (17%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 QS++ + S + VY++A FL++ A K Sbjct: 182 SATAPQSAQSAPVASNFSKQDNFTVYKEATEFLEQGKLPDAKARLE----------WTAK 231 Query: 96 SLLMSAFVQYSAGK-------YQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQMIRD 147 + A Y G+ Y+ A +E T Y D Y+ + + Sbjct: 232 NQYKPASSNYLLGEIAFREKRYKDAIYYYKESATMY------DKADYMPRLLLNSAKSFT 285 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 D+ +K +++ IV Y +S K A+ Sbjct: 286 QTGDKENSK---RFLESIVSLYPDSSEAKEAKK 315 Score = 35.1 bits (80), Expect = 9.8, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 31/78 (39%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + +E+ + A Y+ + + + A + LL SA G + + E Sbjct: 241 YLLGEIAFREKRYKDAIYYYKESATMYDKADYMPRLLLNSAKSFTQTGDKENSKRFLESI 300 Query: 121 ITQYPESKNVDYVYYLVG 138 ++ YP+S L+G Sbjct: 301 VSLYPDSSEAKEAKKLLG 318 >gi|315304677|ref|ZP_07874886.1| TPR domain-containing protein [Listeria ivanovii FSL F6-596] gi|313626951|gb|EFR95875.1| TPR domain-containing protein [Listeria ivanovii FSL F6-596] Length = 491 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 57/146 (39%), Gaps = 15/146 (10%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-M 99 ++ + + +E+ V ++Q +A Y + S P +L Sbjct: 2 DKNKKILAKIYPFYPNGQFYFERGVEAFRDQRIKEAIRYLVRASELEPG----ESVILCQ 57 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 A G++ ++ L + + + N+DY YY + ++A M + + L Sbjct: 58 LAICYTEIGQFHKSNQLLRDILEK--RDGNMDYCYYFIANNFAYM--------KDYRRAL 107 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVG 185 QY +R +E T+ Y + AR + V Sbjct: 108 QYANRYLEMETDGDYAEEARDLIEVL 133 >gi|262192384|ref|ZP_06050537.1| GGDEF family protein [Vibrio cholerae CT 5369-93] gi|262031737|gb|EEY50322.1| GGDEF family protein [Vibrio cholerae CT 5369-93] Length = 578 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 71/212 (33%), Gaps = 32/212 (15%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100 D+ L + D +Y L + + A +Y N+ + + Sbjct: 126 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 185 Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + G+Y+++ E+ + P + + YV+ +G +Y ++ V DQ Sbjct: 186 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 243 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L+Y++ + + LA K +Y AI Sbjct: 244 QALEYVN---------QHKDQHLQGLIYL--SLAQAH-------FKEQKYAQAIDYANQA 285 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A S++ +AY+ LA + EA + Sbjct: 286 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 313 >gi|219685885|ref|ZP_03540691.1| tetratricopeptide repeat domain protein [Borrelia garinii Far04] gi|219672584|gb|EED29617.1| tetratricopeptide repeat domain protein [Borrelia garinii Far04] Length = 1179 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 3/62 (4%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y KA + LK +N+ A ++ P + + A +G QA S E+ Sbjct: 1008 LYLKASINLKNENYPNAISLYSSVIEKNPEN---TSAYINLAKAYEKSGNKTQAISTLEK 1064 Query: 120 YI 121 I Sbjct: 1065 II 1066 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 61/182 (33%), Gaps = 34/182 (18%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 ++ + ++ K +++ + + I P + +Y YL + Sbjct: 973 AIYNLSIAKFENNKLEESLEIINKAINLNP--EKSEY-LYLKASINLKNENYPN------ 1023 Query: 156 KLMLQYMSRIVERYTN--SPYVKGARFYVTVGRNQLAAKEVE-------------IGRYY 200 + S ++E+ S Y+ A+ Y G A +E +G Y Sbjct: 1024 --AISLYSSVIEKNPENTSAYINLAKAYEKSGNKTQAISTLEKIINKNNKLALNNLGILY 1081 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS---LIQERY 257 K+ Y AI F+ + N EA L + + A++++ ++ Sbjct: 1082 KKQKNYQKAIEIFEKAIKN-----SDIEAKYNLATTLIEINDNTRAKDLLKEYTKLKPNN 1136 Query: 258 PQ 259 P+ Sbjct: 1137 PE 1138 >gi|254410362|ref|ZP_05024141.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] gi|196182568|gb|EDX77553.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] Length = 560 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 56/143 (39%), Gaps = 27/143 (18%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + Y +Y++A + ++ + P+ Y +Y G++ + + R + + Sbjct: 337 QGYALYHLERYEEAIASYDKALEIQPDDY---YAWYFRGIALSYLGR--------YEEAI 385 Query: 160 QYMSRIVERYTNSPYVK----GARFYVTVGRNQLAAK----EVEIGRYY--LKRGEYVAA 209 + +E + Y A Y+ +A+ E++ YY RG ++ Sbjct: 386 ASYDKALEIQPDDYYAWYFRGIALSYLGRYEEAIASYDKALEIQPDDYYAWYFRGIALSY 445 Query: 210 IPRFQLVLANYSDAEHAEEAMAR 232 + R++ +A+Y ++A+ Sbjct: 446 LGRYEEAIASY------DKALEI 462 >gi|206972232|ref|ZP_03233179.1| putative lipoprotein [Bacillus cereus AH1134] gi|229067935|ref|ZP_04201249.1| hypothetical protein bcere0025_1560 [Bacillus cereus F65185] gi|229188455|ref|ZP_04315502.1| hypothetical protein bcere0002_1560 [Bacillus cereus ATCC 10876] gi|206732806|gb|EDZ49981.1| putative lipoprotein [Bacillus cereus AH1134] gi|228595009|gb|EEK52781.1| hypothetical protein bcere0002_1560 [Bacillus cereus ATCC 10876] gi|228715144|gb|EEL67006.1| hypothetical protein bcere0025_1560 [Bacillus cereus F65185] Length = 254 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 5/58 (8%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQ 71 + K L +AV VG + ++ V+ ++E+ + KA K + Sbjct: 1 MKKLILISSLVLAVGLGVGCSNEKTKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNE 58 >gi|154150338|ref|YP_001403956.1| putative PAS/PAC sensor protein [Candidatus Methanoregula boonei 6A8] gi|153998890|gb|ABS55313.1| putative PAS/PAC sensor protein [Methanoregula boonei 6A8] Length = 458 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 49/153 (32%), Gaps = 38/153 (24%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y GKY++A + + + P + ++ G+ + R+ + L +S Sbjct: 313 YYREGKYEEAIAAFDRALEIEPSH---AWAWHDRGVCLRALERN--------EDALASIS 361 Query: 164 RIVERYTNSPYV----KGARFYVTVGRN---QLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 + +E + + + + R+ L+ AA+ + + Sbjct: 362 KALELSPSDEEILFTCGATLQKLGILRDDNQILS-----------------AAVDAYNQL 404 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 L +A + A+ D +R+ Sbjct: 405 LDKNP---SDADAWNNMGICVQAMGRDDLSRQY 434 >gi|153814972|ref|ZP_01967640.1| hypothetical protein RUMTOR_01187 [Ruminococcus torques ATCC 27756] gi|145847540|gb|EDK24458.1| hypothetical protein RUMTOR_01187 [Ruminococcus torques ATCC 27756] Length = 440 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 27/76 (35%), Gaps = 7/76 (9%) Query: 62 EKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + L +++ A + ++ + + ++LL A +G + A + Sbjct: 358 AEGTQALNSGDYAGAIDPLSKVVLMNEGYNDG----QALLNLAQAYKGSGDNENATVYFQ 413 Query: 119 EYITQYPESKNVDYVY 134 + I +Y S+ Sbjct: 414 KVIEKYAGSEYAAEAQ 429 >gi|146280922|ref|YP_001171075.1| HemY protein [Pseudomonas stutzeri A1501] gi|145569127|gb|ABP78233.1| HemY protein [Pseudomonas stutzeri A1501] Length = 406 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 8/71 (11%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA---RKSLLMSAFVQYSAGKYQQAASLGEE 119 A + ++++ E + P A +A ++ L A G+Y +A + Sbjct: 125 AARAANELGEYAQSDELLQKAREREPEAALAIGLTQAQLQIA-----RGQYVEARASLSA 179 Query: 120 YITQYPESKNV 130 + +P V Sbjct: 180 LQSDHPRHPYV 190 >gi|88603891|ref|YP_504069.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] gi|88189353|gb|ABD42350.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] Length = 328 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 5/72 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + + + ++ +F KA E F + + P A + ++ A E Sbjct: 250 YVRGMAYYRQGDFKKAAEEFFAVTEEDPSNDKAWNA---YGICLTKLSEFASAERCYENA 306 Query: 121 ITQYPESKNVDY 132 + +P +N+ Y Sbjct: 307 LKIHP--ENMSY 316 >gi|11878110|gb|AAG40808.1|AF289486_1 aspartyl beta-hydroxylase 4.5 kb transcript [Mus musculus] gi|11878112|gb|AAG40809.1|AF289487_1 aspartyl beta-hydroxylase 6.6 kb transcript [Mus musculus] Length = 739 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 3/67 (4%) Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E++ KRG+ A+ F+ ++ Y + A + LA + EV+ Sbjct: 325 ELDAAEKLRKRGKIEEAVNAFEELVRKYPQSP---RARYGKAQCEDDLAEKQRSNEVLRR 381 Query: 253 IQERYPQ 259 E Y + Sbjct: 382 AIETYQE 388 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 24/84 (28%), Gaps = 25/84 (29%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 + + + +V +Y SP + + + LA K+ Sbjct: 333 RKRGKIEEAVNAFEELVRKYPQSPRARYGKA---QCEDDLAEKQ---------------- 373 Query: 210 IPRFQLV----LANYSDAEHAEEA 229 R V + Y +A +A Sbjct: 374 --RSNEVLRRAIETYQEAADLPDA 395 >gi|75906778|ref|YP_321074.1| hypothetical protein Ava_0555 [Anabaena variabilis ATCC 29413] gi|75700503|gb|ABA20179.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413] Length = 173 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 10/82 (12%), Positives = 31/82 (37%), Gaps = 6/82 (7%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYS 106 S + + Y+ + + +A E + + + + + + Sbjct: 2 STESLELAKTRYQAGKFAFENGQYREAVENLEKASALVARN--SRLGGEVEIWLVTAYEA 59 Query: 107 AGKYQQAASLGEEYITQYPESK 128 AG+ + A +L ++ + ++P S+ Sbjct: 60 AGRTEDAIALCQQ-LRRHPHSE 80 >gi|307136074|gb|ADN33923.1| DNAJ heat shock N-terminal domain-containing protein [Cucumis melo subsp. melo] Length = 1337 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 44/147 (29%), Gaps = 30/147 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ-----CSRDFPFAGV-------ARKSLLMSAFVQYSAGK 109 ++ +++A E++ PF V A K+ Sbjct: 1054 AAGNEAFQQGRYAEAVEHYTAALSCNVESR-PFTAVCFCNRAAAYKAQGQVIDA---IAD 1109 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER- 168 A +L EEY + +MIRD + ++ S+ +E+ Sbjct: 1110 CSLAIALDEEYFK----------AISRRA-TLYEMIRDYGQAANDLQKLVSLFSKELEKT 1158 Query: 169 --YTNSPYVKGARFYVTVGRNQLAAKE 193 Y S + + R +LA E Sbjct: 1159 YQYATSDRSSTSTNDLRQTRLRLAEVE 1185 >gi|301624021|ref|XP_002941306.1| PREDICTED: FK506-binding protein-like [Xenopus (Silurana) tropicalis] Length = 272 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Query: 24 LTIFFSIAVCFL-VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 +T+ ++A C + +G ++ + + Y + +Y + V ++ A + F Sbjct: 175 ITLLANLAACDVKMGRMSEAEKRCSRVLEKEPGYVKALYRRGVARAGMADWKGARKDFEA 234 Query: 83 CSRDFPFAGVARKSLL 98 R P A++ LL Sbjct: 235 LLRLDPTNKEAQRELL 250 >gi|299133771|ref|ZP_07026965.1| peptidase M48 Ste24p [Afipia sp. 1NLS2] gi|298591607|gb|EFI51808.1| peptidase M48 Ste24p [Afipia sp. 1NLS2] Length = 475 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 37/118 (31%), Gaps = 11/118 (9%) Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140 R +P + + + A Y G + A + + I P + Y Y L G + Sbjct: 289 ETVYRRYPMSDNSLPARYARAIATYLHGDPRSAITQIDGLIKVEPANP---YFYELKGQA 345 Query: 141 YAQMIRDVPYDQRATKLMLQYMSR-------IVERYTNSPYVKGARFYVTVGRNQLAA 191 + R + +Q + + + S A +++ + LA Sbjct: 346 LLEGGRPTEAI-APFRKAVQLSHQAPLIEMLLGQALVASDNKAYANEAISILKAALAR 402 >gi|297380303|gb|ADI35190.1| Citron Rho-interacting kinase [Helicobacter pylori v225d] Length = 331 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 61/145 (42%), Gaps = 19/145 (13%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVARK 95 R++ ++ D+ Q+E++++A+ LK++++++A E R + + A Sbjct: 189 RKTQEKTKVEFDKDLSKQKEIFQEALTLLKDKSYAEARERLLWLEANSYRLY-YVRYA-- 245 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 V Y KY++A +E ++ + + + S+ ++ D Y Sbjct: 246 ----LGEVAYGEKKYREAIKYYKESALLNKKASYMPVLLWHTAWSFKKIKDDQNY----- 296 Query: 156 KLMLQYMSRIVERYTNSPYVKGARF 180 ++++ + Y +S K A+ Sbjct: 297 ---YKFLNTLQHLYPSSEQAKMAKK 318 >gi|158290263|ref|XP_311858.4| AGAP003019-PA [Anopheles gambiae str. PEST] gi|157017810|gb|EAA07937.4| AGAP003019-PA [Anopheles gambiae str. PEST] Length = 731 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 6/66 (9%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG--KYQQAASLGEEYITQYPESKNVD 131 +A + + ++R +LL A+ + G KY + + +++ + Sbjct: 335 DEAANILERAIN----SVLSRNALLYFAYADFEEGRLKYDKVHQMYNKFLAINDIDPTLA 390 Query: 132 YVYYLV 137 Y+ Y+ Sbjct: 391 YIQYMK 396 >gi|118395435|ref|XP_001030067.1| SLEI family protein [Tetrahymena thermophila] gi|89284355|gb|EAR82404.1| SLEI family protein [Tetrahymena thermophila SB210] Length = 2406 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 45/117 (38%), Gaps = 14/117 (11%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 +Y YE A ++ + + +A +YF + P + + + + +Y QA Sbjct: 1970 KYLETYYELATIYSECKMTEEAIDYFQKAIELDP---LYINAYIELGNLYLGKAEYDQAL 2026 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 ++ I P+ Y +G+ + + Q+ ++Y ++ +E N Sbjct: 2027 ECYQKIIQINPQ---KAVAYNNIGLVHYK--------QKMDDKAIEYYNKALELDPN 2072 >gi|75911021|ref|YP_325317.1| hypothetical protein Ava_4825 [Anabaena variabilis ATCC 29413] gi|75704746|gb|ABA24422.1| Tetratricopeptide TPR_3 [Anabaena variabilis ATCC 29413] Length = 1009 Score = 36.6 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 86/248 (34%), Gaps = 50/248 (20%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSV-TDVRYQREVYEK--AVLFLKE--QNFSKA 76 LT+ ++A L ++ + +V + + +Y+ V L+ +NF +A Sbjct: 6 IPLTLILALASPSLAQAPTPTAEEQITQAVILNSNGESLIYKDFFGVGELQAALENFQQA 65 Query: 77 YEYFNQCSRDFPFAGVARKS--LLMSAFVQYSAGKYQQAASLGE-----EYITQYPESKN 129 F + + A ++ L+ +V + G+Y +A + T+ +++ Sbjct: 66 LAIFKK------YGAKAGEANSLVNIGYVYFRKGEYGKALEYFQSSLDIRRKTRDRQNEW 119 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-NSPYVKGARFYVTVGRNQ 188 + Y +G Y + + P + L + + +S Y + Sbjct: 120 IPLSY--IGEVYVNLGQ-YPQALEYYQPALAIIKELKAANPKDSSYATSEKT-------L 169 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA----------MARLVEAYV 238 LA +IG Y + G+Y A L Y ++A + + YV Sbjct: 170 LA----DIGAVYFRMGQYTKA-------LDFYQKTLAMQKADDDKIGGIQTLNNIGVVYV 218 Query: 239 ALALMDEA 246 L +A Sbjct: 219 NLGNYKQA 226 >gi|331088542|ref|ZP_08337455.1| hypothetical protein HMPREF1025_01038 [Lachnospiraceae bacterium 3_1_46FAA] gi|330407804|gb|EGG87298.1| hypothetical protein HMPREF1025_01038 [Lachnospiraceae bacterium 3_1_46FAA] Length = 440 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 27/76 (35%), Gaps = 7/76 (9%) Query: 62 EKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + L +++ A + ++ + + ++LL A +G + A + Sbjct: 358 AEGTQALNSGDYAGAIDPLSKVVLMNEGYNDG----QALLNLAQAYKGSGDNENATVYFQ 413 Query: 119 EYITQYPESKNVDYVY 134 + I +Y S+ Sbjct: 414 KVIEKYAGSEYAAEAQ 429 >gi|294055476|ref|YP_003549134.1| Peptidoglycan-binding lysin domain protein [Coraliomargarita akajimensis DSM 45221] gi|293614809|gb|ADE54964.1| Peptidoglycan-binding lysin domain protein [Coraliomargarita akajimensis DSM 45221] Length = 286 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 15/128 (11%) Query: 8 AICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF 67 AI A Y+L+ + I + L G S V + TD + Y++ + Sbjct: 18 AILQRLALMYRLH-----VILPILILSLWGLSACSPGKVEIVRETDEKQ----YQRGQHY 68 Query: 68 LKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYS-AGKYQQAASLGEEYITQYP 125 +A + F A +S L + ++ +A YI P Sbjct: 69 KATGRIEEALDAFLGVIDSR----RDAPESHLEAGYIFLREMKDPMRANYHFNRYIELKP 124 Query: 126 ESKNVDYV 133 +S+ V V Sbjct: 125 QSERVPQV 132 >gi|284041455|ref|YP_003391385.1| hypothetical protein Slin_6629 [Spirosoma linguale DSM 74] gi|283820748|gb|ADB42586.1| Tetratricopeptide TPR_2 repeat protein [Spirosoma linguale DSM 74] Length = 458 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 12/110 (10%), Positives = 35/110 (31%), Gaps = 16/110 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + ++ ++ A +N + + +L + ++ Y+ A Sbjct: 171 ARGNCKMQLNDYKGALADYNLSLEK----SPNKPLALAGRGYARFKLEDYKNAILDFNRA 226 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + SK+ +YY G+ +++ + L + V+ Sbjct: 227 VEL---SKDDPELYYRRGLVKSRL--------GEFENALTDFDKTVQLNP 265 >gi|296125573|ref|YP_003632825.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] gi|296017389|gb|ADG70626.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] Length = 631 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 62/217 (28%), Gaps = 31/217 (14%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 ++ ++ L E S AY+ ++ R A K+ + + +G A Sbjct: 188 EESDEALFYVGLIALNEGFQSVAYDTLSKLVRR-SKGEYADKAATILGDIYVISGDTDSA 246 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 YL + + D ++ I + Sbjct: 247 IE------------------MYLKSLVNSDTKPDSIRRLVKIYEQVEDYDGIKKV----- 283 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y + LA E+ Y K Y AI + L D + EA+ L Sbjct: 284 YEQILEQNPNDIDTILALGEL-----YEKENAYDRAIKYYLK-LTKMKDYTNTYEAIGLL 337 Query: 234 VEAYVALALMDEAR-EVVSLIQERYPQGYWARYVETL 269 +Y +++ EA ++ + +E L Sbjct: 338 ANSYYKGSMLKEAEANYKKILMADNKDDLYKTALERL 374 >gi|157123995|ref|XP_001654011.1| hypothetical protein AaeL_AAEL009703 [Aedes aegypti] gi|108874178|gb|EAT38403.1| conserved hypothetical protein [Aedes aegypti] Length = 289 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 21/143 (14%) Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQ 104 D + + E+ + K+ +F K+ + + R P A +S+L A + Sbjct: 107 EEDKLANKAKADELKAQGNELFKQGDFDKSANVYTEALRICPMEYSAERSILFANRAAAK 166 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM----SYAQMIRDVPYDQRATKLMLQ 160 A + I P+ YL + + + + L+ Sbjct: 167 TKLNFKPSAIDDCTKAIEHNPK--------YLKALLRRATLYEEADKLD-------ESLE 211 Query: 161 YMSRIVERYTNSPYVKGARFYVT 183 +I+E + K A + Sbjct: 212 DFKKILELDPANVEAKAAEVRLA 234 >gi|26340240|dbj|BAC33783.1| unnamed protein product [Mus musculus] Length = 725 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 3/67 (4%) Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E++ KRG+ A+ F+ ++ Y + A + LA + EV+ Sbjct: 311 ELDAAEKLRKRGKIEEAVNAFEELVRKYPQSP---RARYGKAQCEDDLAEKQRSNEVLRR 367 Query: 253 IQERYPQ 259 E Y + Sbjct: 368 AIETYQE 374 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 17/80 (21%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 + + + +V +Y SP + + + LA K +R V Sbjct: 319 RKRGKIEEAVNAFEELVRKYPQSPRARYGKA---QCEDDLAEK---------QRSNEV-- 364 Query: 210 IPRFQLVLANYSDAEHAEEA 229 + + Y +A +A Sbjct: 365 ---LRRAIETYQEAADLPDA 381 >gi|151946795|gb|ABS19044.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 114 [Homo sapiens] Length = 721 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWXNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 151 QDVLXVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|325107952|ref|YP_004269020.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] gi|324968220|gb|ADY58998.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] Length = 585 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 11/91 (12%), Positives = 36/91 (39%), Gaps = 8/91 (8%) Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEK-----AVLFLKEQNFSKAYEYFNQCSRDF 87 C + + + + + + R + + A + +++N+ A E F + R++ Sbjct: 150 CLSMNNQWDEAAEQLQKLMEEQRSNPMLLAELKLQLAYAYAQQKNYDGAIEIFEEQVREY 209 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 A +++ +G+ ++A + + Sbjct: 210 --GDSAEL-QSNLSYLYEHSGRLEKALAAAD 237 >gi|283782489|ref|YP_003373244.1| hypothetical protein Psta_4743 [Pirellula staleyi DSM 6068] gi|283440942|gb|ADB19384.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068] Length = 262 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 68/211 (32%), Gaps = 38/211 (18%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-------KYQQAAS 115 + V + ++ N+ A + F P + + A V + G QA S Sbjct: 50 EGVNYFQQGNYQAAQKQFQSALAANPRSP---DAYYNLAAVYHKQGLSTRNQNDLAQAES 106 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 L + + P + G++ T + + +P + Sbjct: 107 LYRQCLDFNPNHVDC-----HRGLAVLL---------TETGRADLAFTEMKNWSIANPGL 152 Query: 176 KGARFYVTVGR-----NQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEE 228 AR + N+ A + + + + + AA+ R + + ++ Sbjct: 153 SDARVELARLYEEYGDNRSAEQILYEAQA-IDINNWRAHAALGRIKE------QSGDVQQ 205 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259 A+ AY + +E ++++Q+R P Sbjct: 206 AILNYQRAYALNGNQPQFQERIAMLQQRAPG 236 >gi|296121481|ref|YP_003629259.1| alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen [Planctomyces limnophilus DSM 3776] gi|296013821|gb|ADG67060.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Planctomyces limnophilus DSM 3776] Length = 679 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 3/62 (4%) Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRAT--KLM-LQYMSRIVERYTNSPYVKGARFYV 182 S V YV Y ++ + + + + + L+ + + Y NS A + Sbjct: 440 ASPLVPYVTYRRMLAQYSVEMNTANEAKRADIQKAWLESLEGFITTYPNSEDASEAMLQL 499 Query: 183 TV 184 + Sbjct: 500 AI 501 >gi|229176772|ref|ZP_04304174.1| hypothetical protein bcere0005_1570 [Bacillus cereus 172560W] gi|228606664|gb|EEK64083.1| hypothetical protein bcere0005_1570 [Bacillus cereus 172560W] Length = 254 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 5/58 (8%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQ 71 + K L +AV VG + ++ V+ ++E+ + KA K + Sbjct: 1 MKKLILISSLVLAVGLGVGCSNEKTKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNE 58 >gi|225156283|ref|ZP_03724761.1| hypothetical protein ObacDRAFT_8151 [Opitutaceae bacterium TAV2] gi|224803015|gb|EEG21260.1| hypothetical protein ObacDRAFT_8151 [Opitutaceae bacterium TAV2] Length = 741 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 43/153 (28%), Gaps = 38/153 (24%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPE----SKNVDYVYYLVGMSYAQMIRDVPYD 151 L A + G+ ++A + + + P K++ V + D Sbjct: 512 VQLNRADALHRLGRLEEAIAACRQAVQLNPALPDAHKDLGLVL-------------LEND 558 Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 Q R E + V L RG+Y AI Sbjct: 559 Q--LDEADAAFVRAGELAPGNGDA--VNLRGIVC---------------LIRGDYAGAIA 599 Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244 RFQ + Y A+ A L A+ L D Sbjct: 600 RFQDAIELYGGAQSY--AHLSLHLAHRLTGLSD 630 >gi|213510886|ref|NP_001134029.1| DnaJ homolog subfamily C member 3 [Salmo salar] gi|209156216|gb|ACI34340.1| DnaJ homolog subfamily C member 3 precursor [Salmo salar] Length = 500 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 30/239 (12%), Positives = 72/239 (30%), Gaps = 43/239 (17%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A F++ KA S+ ++ + + Y G ++ + + E + Sbjct: 193 RAECFIQMGEMGKAISDLTAASKL---KSDNTQAFYKLSTIYYHLGDHEMSLNEVRECLK 249 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVP--YDQRATKLMLQYMSRIVERYTN-SPYVKGAR 179 P+ + Y +Y + I+ Q+ + +++ N Y A+ Sbjct: 250 LDPDHEQC-YSHYKQVKKLNKQIQSAEELIQQQRYGDAVSKYESVIKTEPNVPQYSHHAK 308 Query: 180 FYVTVGRNQLAAKEVEI------------------------GRYYLKRGEYVAAIPRFQL 215 + LA ++ ++ YL +Y AI ++ Sbjct: 309 ERICHC---LAQEQQDVSRAITVCSEVLQSDPQNVNVLKDRAEAYLLDEQYEEAIKDYET 365 Query: 216 VLANYSDAEHAEEAMA----RLVEA-----YVALALMDEAREVVSLIQERYPQGYWARY 265 + + +E + L ++ Y L + A++ + R W Sbjct: 366 AREHSENDRQIKEGLEKAQRLLKQSQKRDYYKILGVKRTAQKKEIVKAYRKQAQQWHPD 424 >gi|187250949|ref|YP_001875431.1| putative Zn-dependent protease [Elusimicrobium minutum Pei191] gi|186971109|gb|ACC98094.1| Putative Zn-dependent protease [Elusimicrobium minutum Pei191] Length = 389 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 49/157 (31%), Gaps = 30/157 (19%) Query: 62 EKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ ++LK NF A + F + R P + L Y +A E Sbjct: 128 KRGQVYLKRDNFDLAVKDFEKYSSKRKKPNSFY-----LELGRSYLGNYNYDKAHKQFET 182 Query: 120 YITQYPESKN-------VDYV---------YYLVGMSY-------AQMIRDVPYDQRATK 156 +I P++ V+Y + ++ ++ V D + Sbjct: 183 FIALEPKNHEGYFYLGRVEYARGNYDEAISLFSKAVNRNENYAPAYRLRGTVFKDIGDFE 242 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 ++ ++++E + Y N AA E Sbjct: 243 SAVEDFTKLIELLPDYSYYNRRGLVYEELGNLKAAAE 279 >gi|124516752|gb|EAY58260.1| probable cellulose synthase operon protein C [Leptospirillum rubarum] Length = 518 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 23/188 (12%), Positives = 56/188 (29%), Gaps = 47/188 (25%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + ++A G SR L + ++Y A ++ + +A E++ + Sbjct: 14 VLSLTLATLVSGGLLSPESRTYAL---SGDEALGQLYRNARFWMNRGDLVRATEFWTRIL 70 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV-------------- 130 P ++L V G ++A L + +P + Sbjct: 71 HLRPNDP---RALTNLGIVAAQGGDLKKANILLDRLSRSHPGDPGIEKIRSAILLGKLDV 127 Query: 131 --------------------DYVYYLV------GMSYAQMIRDVPYDQRATKLMLQYMSR 164 DY YL G++ ++++ + ++ + + Sbjct: 128 KWLLLARKERKEQHFSAAYQDYERYLKGSPPRGGLA-LEVLQTESAVPDHFRNAVRGLRQ 186 Query: 165 IVERYTNS 172 + R+ S Sbjct: 187 LAARHPES 194 >gi|295390525|ref|NP_001171320.1| aspartyl/asparaginyl beta-hydroxylase isoform 3 [Mus musculus] gi|123122169|emb|CAM15540.1| aspartate-beta-hydroxylase [Mus musculus] gi|123210002|emb|CAM26696.1| aspartate-beta-hydroxylase [Mus musculus] gi|123228168|emb|CAM19154.1| aspartate-beta-hydroxylase [Mus musculus] Length = 725 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 3/67 (4%) Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E++ KRG+ A+ F+ ++ Y + A + LA + EV+ Sbjct: 311 ELDAAEKLRKRGKIEEAVNAFEELVRKYPQSP---RARYGKAQCEDDLAEKQRSNEVLRR 367 Query: 253 IQERYPQ 259 E Y + Sbjct: 368 AIETYQE 374 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 17/80 (21%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 + + + +V +Y SP + + + LA K +R V Sbjct: 319 RKRGKIEEAVNAFEELVRKYPQSPRARYGKA---QCEDDLAEK---------QRSNEV-- 364 Query: 210 IPRFQLVLANYSDAEHAEEA 229 + + Y +A +A Sbjct: 365 ---LRRAIETYQEAADLPDA 381 >gi|77163933|ref|YP_342458.1| peptidase M48, Ste24p [Nitrosococcus oceani ATCC 19707] gi|254435569|ref|ZP_05049076.1| peptidase, M48 family [Nitrosococcus oceani AFC27] gi|76882247|gb|ABA56928.1| Peptidase M48, Ste24p [Nitrosococcus oceani ATCC 19707] gi|207088680|gb|EDZ65952.1| peptidase, M48 family [Nitrosococcus oceani AFC27] Length = 529 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 18/127 (14%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFV 103 L + V Y++ L+E N +A + + P R++L + V Sbjct: 277 AKLAPLRQVETAYAAYDQGRKALQEGNLEQALSLAERAITEEP-----REALFYGLRGDV 331 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + +YQ+A + I + + Y Y G+ + ++ Q + Sbjct: 332 YLARKRYQEALADYNRAIK---RNDHFFYFYNQRGLVNKAL--------GHSEKARQDLQ 380 Query: 164 RIVERYT 170 + + Sbjct: 381 QSIALLP 387 >gi|332702707|ref|ZP_08422795.1| cell wall hydrolase/autolysin [Desulfovibrio africanus str. Walvis Bay] gi|332552856|gb|EGJ49900.1| cell wall hydrolase/autolysin [Desulfovibrio africanus str. Walvis Bay] Length = 593 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 10/82 (12%), Positives = 25/82 (30%), Gaps = 5/82 (6%) Query: 118 EEYITQYPESKNVDYV---YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 E + Y Y + +G + ++ + + Y R+ R+ N + Sbjct: 70 EHFRRAYAGDPEGSYAPKSLFYLGRVHEELGLRSNRKDDFIR-AVDYFQRMSTRFPNHAW 128 Query: 175 VKGARFYVTVGR-NQLAAKEVE 195 + +L K++ Sbjct: 129 TDDSLLRKAKINLERLGEKDLA 150 >gi|320161272|ref|YP_004174496.1| hypothetical protein ANT_18700 [Anaerolinea thermophila UNI-1] gi|319995125|dbj|BAJ63896.1| hypothetical protein ANT_18700 [Anaerolinea thermophila UNI-1] Length = 1053 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 74/206 (35%), Gaps = 27/206 (13%) Query: 61 YEKAVLFL-KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y + V L + +A + + FP L A + +Y +A + + Sbjct: 9 YAREVENLIEHGQIEEAIAHAKNILKQFP--KYIEAYRL-LAKAYLESQRYTEAMDILQR 65 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 ++ +P+ D++ +L GMS +IR+ D+ + +M R E + V+ Sbjct: 66 ILSVFPD----DFIAHL-GMS---IIRE---DEGNLDAAIWHMERAYEVQPFNRAVQDEL 114 Query: 180 FYVTVGRN-------QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 + R+ +L + R Y + Y AI + LA + + Sbjct: 115 RRLYGRRDGVEPPRIRLTRGAL--VRMYDRGNLYPQAIAEIRAALAE---DGARLDLLVL 169 Query: 233 LVEAYVALALMDEAREVVSLIQERYP 258 L Y EA EV S + + P Sbjct: 170 LARMYYLSGQKIEAAEVASSLISKLP 195 >gi|193785201|dbj|BAG54354.1| unnamed protein product [Homo sapiens] Length = 795 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 26/207 (12%), Positives = 59/207 (28%), Gaps = 37/207 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 KAV +L+++++++A E+ + V + + + Y + QA+S + I Sbjct: 429 NKAVTYLRQKDYNQAVEFLKVLEKKD--NRVKSAAATNLSALYYMGKDFAQASSYAD--I 484 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS--------- 172 + Y L ++ D + ++ + +S Sbjct: 485 AVNSDR------YNLAALTNKGNTVFANGD---YEKAAEFYKEALRN--DSSCTEALYNI 533 Query: 173 ----------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + A +I Y AI V++ Sbjct: 534 GLTYEKLNRLDEALDCFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPT 593 Query: 223 AEHAEEAMARLVEAYVALALMDEAREV 249 +++L E Y +A + Sbjct: 594 DPQV---LSKLGELYDREGDKSQAFQY 617 >gi|86748544|ref|YP_485040.1| TPR repeat-containing protein [Rhodopseudomonas palustris HaA2] gi|86571572|gb|ABD06129.1| TPR repeat protein [Rhodopseudomonas palustris HaA2] Length = 221 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 39/114 (34%), Gaps = 13/114 (11%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSA 107 S T + +A + ++ + F A + + + P G R++ + Y Sbjct: 94 SQTSSDTTALLMSRAKVAMEAKQFDVAVKLLDAVVKLRPDYIEGWNRRATI-----FYLQ 148 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY-AQMIRDVPYDQRATKLMLQ 160 +Y ++ E+ + + P L G+ Q + D A + L Sbjct: 149 NEYARSLGDIEQVLAREPRHFGA-----LAGLGMIMQELGDDKRALDAFRKALA 197 >gi|78780092|ref|YP_398204.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT 9312] gi|78713591|gb|ABB50768.1| TPR repeat [Prochlorococcus marinus str. MIT 9312] Length = 262 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 3/95 (3%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G Q+ +D D + +Y A + + KA + F++ + P +AR Sbjct: 113 LGLWSQAKKDYMFVISQDNKNFSALYNLANVEGSASQWEKARDLFSKAATYNPGFAMARS 172 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 S+ A + G ++ ++ I +YP + Sbjct: 173 SM---ALADFQLGNIDESEKELKKLIRRYPTFADA 204 >gi|113475342|ref|YP_721403.1| hypothetical protein Tery_1657 [Trichodesmium erythraeum IMS101] gi|110166390|gb|ABG50930.1| TPR repeat [Trichodesmium erythraeum IMS101] Length = 594 Score = 36.6 bits (84), Expect = 3.5, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 36/103 (34%), Gaps = 29/103 (28%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV---------ARKS-LLMSAFVQ------ 104 Y +A+ + N++KA R + + A ++ A+ Sbjct: 100 YNQALQ--ESPNYTKA-----YVERSAAYTKLGKHSIAIEDADRAIQFEPAYANAYVQRA 152 Query: 105 ---YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + YQQA S+ + + P N+ YY G + Q+ Sbjct: 153 DVDFRLNNYQQAISIYDRGLRLNP---NLPLAYYDQGRCFLQL 192 >gi|325929583|ref|ZP_08190697.1| hypothetical protein containing a divergent form of TPR repeats [Xanthomonas perforans 91-118] gi|325540093|gb|EGD11721.1| hypothetical protein containing a divergent form of TPR repeats [Xanthomonas perforans 91-118] Length = 251 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 45/132 (34%), Gaps = 19/132 (14%) Query: 64 AVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A L ++++A E++ + +L A Q+ G+ QQ + I Sbjct: 95 AETLLARGDYAQAAEHYQGALRGLY---RDDPHLMLGLARAQFGLGQPQQTRQTLDALIA 151 Query: 123 QYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P ++ D G + YA+ + T+ L + + Y + AR Sbjct: 152 ANPSFRSHD------GHLLYARAVEGS----GDTEAALHEYETLAQGYP----GEEARVR 197 Query: 182 VTVGRNQLAAKE 193 ++A + Sbjct: 198 YAQLLQRIARND 209 >gi|260857634|ref|YP_003231525.1| cellulose synthase subunit [Escherichia coli O26:H11 str. 11368] gi|260870256|ref|YP_003236658.1| cellulose synthase subunit [Escherichia coli O111:H- str. 11128] gi|257756283|dbj|BAI27785.1| cellulose synthase subunit [Escherichia coli O26:H11 str. 11368] gi|257766612|dbj|BAI38107.1| cellulose synthase subunit [Escherichia coli O111:H- str. 11128] gi|323154038|gb|EFZ40244.1| cellulose synthase operon protein C [Escherichia coli EPECa14] Length = 1140 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 36/236 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 426 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 482 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVG-------MSYAQMIRDVP 149 + + AG+ QA +L Q P Y Y YL G +++ I +P Sbjct: 483 RLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLSGHDQDRAALAH---INSLP 539 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEIG 197 Q + +V R S V + G+ A ++ + Sbjct: 540 RAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLA 593 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 594 DWAQQRRDYTAARAAYQNVLTLEPT---NADAILGLTEVDIAAGDTAAARSQLAKL 646 Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 339 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 395 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 396 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 441 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 442 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 490 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 491 AGQRSQADTLMRNLAQQKPNDPEQVYAYGL 520 >gi|170094584|ref|XP_001878513.1| predicted protein [Laccaria bicolor S238N-H82] gi|164646967|gb|EDR11212.1| predicted protein [Laccaria bicolor S238N-H82] Length = 815 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 29/99 (29%), Gaps = 16/99 (16%) Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEE----YITQYPESKNVDYVYYLVGMSYAQMIRD 147 +LL V + + +A +E Y + V +L+ D Sbjct: 471 WLPLALLRLGTVYFRLNDFPKAIEALQEALGLYEKLNDLN-WVAQAQFLLA--------D 521 Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 + + + Q S +R+ V AR R Sbjct: 522 IARLRGEHAVAFQLFSEAYKRF---EDVDDARNMAACLR 557 >gi|126656924|ref|ZP_01728102.1| hypothetical protein CY0110_02059 [Cyanothece sp. CCY0110] gi|126621762|gb|EAZ92471.1| hypothetical protein CY0110_02059 [Cyanothece sp. CCY0110] Length = 270 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 59/206 (28%), Gaps = 37/206 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + + A FN+ P A L GKY+ A + + Sbjct: 79 NRGNARVSQNKLEAAIADFNEAIELAP---DAPDPYLNRGTALEGQGKYEAAIADYNRVL 135 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P M+Y + Q + L + VE N + + Sbjct: 136 ELNPND----------AMAYNNR-GNAESGQGDWEKALTDYQKAVEIAPNFAFARANAAL 184 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 V+ +IG K+GE AI + ++ Y A+ + Sbjct: 185 VSY----------QIG----KKGE---AITEMRNLVRKYPMFPDMRAAL---TAVLWNMG 224 Query: 242 LMDEARE--VVSL-IQERYPQGYWAR 264 EA V ++ + RY W + Sbjct: 225 QQGEAESHWVAAVGMDNRYQDLDWVK 250 >gi|291539745|emb|CBL12856.1| Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain [Roseburia intestinalis XB6B4] Length = 485 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 3/64 (4%) Query: 128 KNVDYVYYLVGMSY--AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 +++DYV Y++ ++ A+ + D Q+ K + + E +S Y K + Sbjct: 61 EDIDYVMYIIVVNSERAEELVDTQKPQKMIKEAREVFGELAED-ADSAYAKQRLSRILKS 119 Query: 186 RNQL 189 + L Sbjct: 120 LDTL 123 >gi|284051331|ref|ZP_06381541.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca] Length = 526 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 23/203 (11%), Positives = 52/203 (25%), Gaps = 41/203 (20%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ A L++ +A +NQ + P + GK +A + + Sbjct: 6 FDTANQLLRKGQLDEAIASYNQAIAESPQSAW---YYHNLGEALSQQGKIDEAIAAYRQA 62 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS-------- 172 P S + + Q + + +E + Sbjct: 63 TELNPNSAW-----------SYDNLGTLLNQQGNLPEAVSCFRKAIELDPDFSEFYHNLA 111 Query: 173 ---------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 + A +G+ Y ++ +Y A+ ++ L Sbjct: 112 LVLIKEGRLEEAVSLLQKAIELKADDAELYHSLGKAYQQQQQYSEAVTAYRQGLELNP-- 169 Query: 224 EHAEEAMARLVEAYVALALMDEA 246 + Y++L EA Sbjct: 170 --------YWSDCYLSLGQTLEA 184 >gi|262402222|ref|ZP_06078783.1| tPR domain protein putative component of TonB system [Vibrio sp. RC586] gi|262351004|gb|EEZ00137.1| tPR domain protein putative component of TonB system [Vibrio sp. RC586] Length = 326 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 21/58 (36%), Gaps = 8/58 (13%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYSAGKYQQAASLGEE 119 A L L+E ++ +A +Q R++ + A Y + + A + Sbjct: 246 AQLLLQEGDYEQALAELDQVKERD------RQAQVALAKTRALYKLNQLEAALLQAKR 297 >gi|300772310|ref|ZP_07082180.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33861] gi|300760613|gb|EFK57439.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33861] Length = 301 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 28/90 (31%), Gaps = 10/90 (11%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSS----RDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74 + + L I ++ FL + Y T+ R + Y++ L L E Sbjct: 2 MKQSVLPISILLSGLFLTSCVSSGKFKSLQTDYDKLQTEHRDLAQKYQQGQLDLTEGRTR 61 Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + + + A + L A+ Sbjct: 62 --IKSLEE---QLAY-EKANNAQLKEAYAN 85 >gi|119505471|ref|ZP_01627544.1| hypothetical protein MGP2080_08494 [marine gamma proteobacterium HTCC2080] gi|119458749|gb|EAW39851.1| hypothetical protein MGP2080_08494 [marine gamma proteobacterium HTCC2080] Length = 396 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 3/55 (5%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 A + + +A YFN+ P ++ L A Y G+ Q A E Sbjct: 319 ARSAYESGEYQQAINYFNKAISLAP---YLHEAQLGIAQSLYETGELQGAKKALE 370 >gi|157368400|ref|YP_001476389.1| cellulose synthase subunit BcsC [Serratia proteamaculans 568] gi|157320164|gb|ABV39261.1| cellulose synthase operon C domain protein [Serratia proteamaculans 568] Length = 1157 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 77/224 (34%), Gaps = 62/224 (27%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-----SAGKYQQAASL 116 ++A +++ + +A E + + + P + Y AG+ +QA +L Sbjct: 469 QQAEQLAQQKQWHQAAEKYRRAQQMDPDDVW-------LTY-HYAQTLRQAGQPEQADAL 520 Query: 117 GEEYITQYPESKNV--DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + + + Y YL G DQ L ++ + ++ + Sbjct: 521 FSRLAQKQRGNPQLTYAYALYLSG---------SDRDQ----QALAQLNTL----PSAQW 563 Query: 175 VKGARF-----YVTVG-----RNQLAAKE-----------------VEIGRYYLKRGEYV 207 R + R + A E +++ + L RG+Y Sbjct: 564 NDNMRELAQRLKMQATLEHAERLRAAGDEPGAVAYLHRQPADTRIDLQLADWALARGDYD 623 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251 AA+ +Q V + +A +EAYVA ++EAR+ + Sbjct: 624 AALADYQRVRVREPN---NPDARLGEIEAYVAQGKLNEARQRLQ 664 >gi|110805283|ref|YP_688803.1| tetratricopeptide repeat-containing protein [Shigella flexneri 5 str. 8401] gi|110614831|gb|ABF03498.1| putative heat shock protein [Shigella flexneri 5 str. 8401] Length = 371 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 36/186 (19%) Query: 64 AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + +A + FNQ DF + + + A ++Q+A + E + Sbjct: 96 GRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQA-----TSEWQKAIDVAERLV 150 Query: 122 TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + + V+ ++ + + + D+ K NS Sbjct: 151 KLGKDKQRVEIAHFYCELALQHM-ASDDLDRAMTLLKKGAAADK-------NS------- 195 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 A + +GR ++ +GEY A+ Q V++ D E E + L Y Sbjct: 196 ----------ARVSIMMGRVFMAKGEYAKAVESLQRVIS--QDRELVSETLEMLQTCYQQ 243 Query: 240 LALMDE 245 L E Sbjct: 244 LGKTAE 249 >gi|109096285|ref|XP_001097194.1| PREDICTED: RNA polymerase II-associated protein 3 isoform 1 [Macaca mulatta] Length = 665 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 46/143 (32%), Gaps = 21/143 (14%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + + EK + K+ + +A + + + P+ V A + K+ Sbjct: 129 DSQKALVLKEKGNKYFKQGKYDEAIDCYTKGMDADPYNPVLPT---NRASAYFRLKKFAV 185 Query: 113 AASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A S I N Y Y G + + + + + R++E Sbjct: 186 AESDCNLAIAL-----NRSYTKAYSRRGAARFALQK--------LEEAKKDYERVLELEP 232 Query: 171 NSPYVKGARFYVTVGRNQLAAKE 193 N+ A + LA+KE Sbjct: 233 NN---FEATNELRKINQALASKE 252 >gi|37519855|ref|NP_923232.1| hypothetical protein gvip023 [Gloeobacter violaceus PCC 7421] gi|35210846|dbj|BAC88227.1| ycf37 [Gloeobacter violaceus PCC 7421] Length = 173 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 56/179 (31%), Gaps = 31/179 (17%) Query: 24 LTIFFSIAVCFLVGWER--------------QSSRDVYLDSVTDVRYQREVYEKAVLFLK 69 L IF+ I + L+GW + ++ YE +L+ Sbjct: 5 LRIFYLIGLAALLGWLAWQVFRQVRRNVGVEGVINKLQPKVKGGQASAQDYYELGCAYLE 64 Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 ++ + A E F + + P A + F + +Y A ++ + P Sbjct: 65 KRLYMDATENFKKALQAEP--EFAE-AHNNLGFCHFQQRQYDLAIREYKDAVRFKP---- 117 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 DYV L + +A ++ L+ +++ + A R + Sbjct: 118 -DYVSALNNLGHALEMKG------QALQALEAYDQVLTLQPAN---ATAERRARALRKR 166 >gi|218438974|ref|YP_002377303.1| hypothetical protein PCC7424_2005 [Cyanothece sp. PCC 7424] gi|218171702|gb|ACK70435.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424] Length = 512 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 41/132 (31%), Gaps = 24/132 (18%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y K + + +A + +++ D+ A R L +Y +A Sbjct: 400 YGLGYSLNKLERYQEAIKSYDKALEFKSDYHEAWYGRGVSLR------RLERYDEAIQSY 453 Query: 118 EEYITQYPESKNVDYVYY--LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 ++ + P + Y G+S + R + ++ + +E N Y Sbjct: 454 DKALEIDPNNP-----LYWNSRGLSLQNLKR--------YEEAIKSYDKALEIDPNFDYA 500 Query: 176 KGARFYVTVGRN 187 R + N Sbjct: 501 IENRQRLLHILN 512 >gi|213964202|ref|ZP_03392438.1| SprE [Capnocytophaga sputigena Capno] gi|213953169|gb|EEB64515.1| SprE [Capnocytophaga sputigena Capno] Length = 832 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264 AI R + VLA+ E A+ L + Y +A S + YP +A+ Sbjct: 566 AIQRLERVLASNPTPEIEAAALYELQKNYTDTH-NSKAETTKSRLLANYPNTDYAK 620 Score = 35.9 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 58/173 (33%), Gaps = 21/173 (12%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + + A E + P ++ + ++ ++ SR+ Sbjct: 559 KFKENELAIQRLERVLASNPT-PEIE------AAALYELQKNYT--DTHNSKAETTKSRL 609 Query: 166 VERYTNSPYVK--GARFYVTVGRNQLAAKEVEI----GRYYLKRGEYVAAIPRFQLVLAN 219 + Y N+ Y K RN++A V + +Y RGE++ R Q Sbjct: 610 LANYPNTDYAKLLQGGETTQHERNKIAQ--VFVDSLTAQY--NRGEFIETARRLQEEGLQ 665 Query: 220 YSDAEHAEEAMARL-VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271 Y + A A+A L + L + + + I YP + + L++ Sbjct: 666 YRETAAAP-AIALLQAKTTARLEGLAPYQAQLQQIATNYPATAESEEAKNLLE 717 >gi|209526186|ref|ZP_03274717.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] gi|209493442|gb|EDZ93766.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] Length = 276 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 73/247 (29%), Gaps = 48/247 (19%) Query: 24 LTIFFSIAVCFL---------VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74 L +F ++ C+L + W + + ++ E+ E+A + F+ Sbjct: 5 LILFLTVVFCWLWLGVVSPYNLAWAATDTVGETVAEIS-TLSLDELLERAFATSQAGRFA 63 Query: 75 KAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 +A Y+ + +P + + + S + +A I P Sbjct: 64 EAENYWTEIINRYPDNPAMWSNRGNIRV-----SQNRLTEAIGDYNRAIELAPT---AAD 115 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 Y G++Y + R + +R +E A Y G N A + Sbjct: 116 PYLNRGVAYEGLGRWSD--------AIADYNRTLELSP-----SDAIAYNNRG-NAEAGQ 161 Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E + AAI + + A A A EA + Sbjct: 162 E-----------NWEAAIADYFQAAELDPNYAF---ARANYALALYQTGETKEAIRNIKN 207 Query: 253 IQERYPQ 259 + +YP Sbjct: 208 LIRKYPN 214 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 27/72 (37%), Gaps = 9/72 (12%) Query: 62 EKAVLFLKEQNFSKAY-EYFNQ--CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + ++N+ A +YF ++ F + A Y G+ ++A + Sbjct: 153 NRGNAEAGQENWEAAIADYFQAAELDPNYAF------ARANYALALYQTGETKEAIRNIK 206 Query: 119 EYITQYPESKNV 130 I +YP ++ Sbjct: 207 NLIRKYPNFADM 218 >gi|172035397|ref|YP_001801898.1| hypothetical protein cce_0481 [Cyanothece sp. ATCC 51142] gi|171696851|gb|ACB49832.1| unknown [Cyanothece sp. ATCC 51142] Length = 252 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 22/168 (13%), Positives = 54/168 (32%), Gaps = 43/168 (25%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP----- 88 ++G QSS S+ V E+ ++ + ++ N+ A + FNQ P Sbjct: 41 VIMGCNHQSSSIPIESSLLTVDTV-EMVQQGIEKSRQGNYEAAVDDFNQVLAQNPQDINA 99 Query: 89 -------FAGVAR-------------------KSLLMSAFVQYSAGKYQQAASLGEEYIT 122 ++ + + ++ + V G+ ++A S E+ + Sbjct: 100 YFNRGFAYSSLGQFEQALADFTKVLKLDPQMVQAYVNRGNVYLQLGEDEKAISDYEKALK 159 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 P + +G+++ + +L ++ V Sbjct: 160 INPND---AFAQNNLGLAHLNS--------GSPELAKIDFTQAVTIDP 196 >gi|171687120|ref|XP_001908501.1| hypothetical protein [Podospora anserina S mat+] gi|170943521|emb|CAP69174.1| unnamed protein product [Podospora anserina S mat+] Length = 523 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 14/102 (13%), Positives = 34/102 (33%), Gaps = 18/102 (17%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A+ + F +A + F + S K L + + G+++QA + + Sbjct: 12 EALKYYDNNEFDEALQAFERISD-------TSKILFNMGVINATLGQHEQAVECYQRAVK 64 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + + Y+ G+S + + L + Sbjct: 65 L---DRYLAVAYFQQGVSNFLL--------GDFEEALANFND 95 >gi|91086811|ref|XP_973640.1| PREDICTED: similar to fleer [Tribolium castaneum] gi|270009704|gb|EFA06152.1| hypothetical protein TcasGA2_TC008997 [Tribolium castaneum] Length = 650 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 6/70 (8%) Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 +K+ F A + + P + R L + A+ + + AAS EE YP Sbjct: 18 TLIKDNRFPDAIKILHGI----PESNSTRAGLSLLAYCYFYIQDFNNAASYYEELTQMYP 73 Query: 126 ESKNVDYVYY 135 +N DY Y Sbjct: 74 --ENNDYKLY 81 >gi|85859797|ref|YP_461999.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB] gi|85722888|gb|ABC77831.1| tetratricopeptide repeat domain containing protein [Syntrophus aciditrophicus SB] Length = 663 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 50/170 (29%), Gaps = 50/170 (29%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +Y +A L ++++ + + +R FP Y + A + E Sbjct: 135 LYSQAELDMQKEAWGDVVAKLKKVNRIFP---------------NYEDTTARLARAEQES 179 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 Y G+S ++ Q KL Q ++E N Y A+ Sbjct: 180 AKQL-----------YQQGLSLSK--------QDEWKLAAQAFKSVIELVPN--YYDVAK 218 Query: 180 FYVTVG-------RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 + N A K + R + A+ F+ L + Sbjct: 219 LHQEAISRDSFDYFNSEAEKAIH-------RQNWARAVFLFEKALEYQPE 261 >gi|67608936|ref|XP_666914.1| phosphoprotein phosphatase -related [Cryptosporidium hominis TU502] gi|54657990|gb|EAL36686.1| phosphoprotein phosphatase -related [Cryptosporidium hominis] Length = 525 Score = 36.6 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 16/137 (11%), Positives = 38/137 (27%), Gaps = 29/137 (21%) Query: 63 KAVLFLKEQNFSKAYEYFN-QCSRDFPFAG---------VARKSLLMSAFVQYSAGKYQQ 112 K K +++A EY+ + ++L + Sbjct: 20 KGNESFKSGKYNEAIEYYTLAIKTSQASNETQNKNLHIYYSNRAL-----CHIRLENFGS 74 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A E I P YY G++Y +++ L + ++ + Sbjct: 75 AIEDSGESIKCCPSFSK---AYYRRGIAYFNLLKYS--------LARKDFMMVLNL---T 120 Query: 173 PYVKGARFYVTVGRNQL 189 + A+ + + + Sbjct: 121 QNDRDAQSKIQICTKLI 137 >gi|294667769|ref|ZP_06732979.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602395|gb|EFF45836.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 837 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 45/153 (29%), Gaps = 23/153 (15%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 + D T Y E + A ++F + P +A + Sbjct: 400 NSPALPDVTTSSLDALRAYALGQQRYSEGKYVAALDFFQKAVDIDPHFALAWLGQVR--- 456 Query: 103 VQYSAGKYQQAASL---GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 ++ Y++A E++ ++ P + Y+ S+ I D Sbjct: 457 AHFANVDYKKATETLRVAEQFKSRLPPRE----ALYVK--SWGVQILDPA-------QAA 503 Query: 160 QYMSRIVERYTNSPYVK-GARFYVT-VGRNQLA 190 ++ E Y + Y A + N+ A Sbjct: 504 DSWIQMAELYPD--YAPAQANAAMDLFVANRFA 534 >gi|229112565|ref|ZP_04242102.1| TPR domain protein [Bacillus cereus Rock1-15] gi|228670945|gb|EEL26252.1| TPR domain protein [Bacillus cereus Rock1-15] Length = 515 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 76/224 (33%), Gaps = 53/224 (23%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 E+A +++ +A ++D+P ++G A + +G +A L E Sbjct: 167 EEANRYIRNGQLEEAIATLEIVTKDYPEFWSGHN-----NLAIAHFQSGNVDKALKLTEM 221 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS------- 172 + + P + + + + Y K + ++V Y S Sbjct: 222 ILEKNPGN--------IHALCNTLIFL---YSIGEHKQVEALAGQLVSVYPISFEHRLKL 270 Query: 173 -------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA--------AIPRFQLVL 217 Y + A + + + Q E ++ YY Y A A +Q V+ Sbjct: 271 GTTLATIGYFEHAYKWFKLLKRQ--GYEGDVSFYYWF--AYSAYMVKDQQLAEKMWQYVV 326 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVV-SLIQERYPQG 260 + D + E + AL L DE + V+ +++ + Q Sbjct: 327 ELHPDKKG--------KEPWNALNLTDEGQNVLFEELRKSFQQS 362 >gi|218961281|ref|YP_001741056.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] gi|167729938|emb|CAO80850.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] Length = 361 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 3/57 (5%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 + E + + N+++A +YF + P +L+ + Y Y++A S Sbjct: 199 LMEMGTFYYNKGNYAEAVKYFEKARPQIPTN---IDNLMNISACYYELKDYEKAMSA 252 >gi|326436271|gb|EGD81841.1| kinesin light chain isoform 1 [Salpingoeca sp. ATCC 50818] Length = 659 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 23/68 (33%), Gaps = 12/68 (17%) Query: 61 YEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 Y + + ++ +A ++ + P S L YS G+Y Sbjct: 223 YNNLGSAYHSKGDYDRAIAFYEKALAIRVEMLGEKHPSTA---DSYLGLGNAYYSKGEYD 279 Query: 112 QAASLGEE 119 +A + E+ Sbjct: 280 KAIAFYEK 287 >gi|325523298|gb|EGD01652.1| family 2 glycosyl transferase [Burkholderia sp. TJI49] Length = 644 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 10/70 (14%), Positives = 24/70 (34%), Gaps = 10/70 (14%) Query: 62 EKAVLFLKEQNF---SKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASL 116 A ++ +KA ++ + A+ + L A+V + G+ +A Sbjct: 81 NAAYAAFHHKDRRFRAKAAKHLRTLLQHH-----AQDAELHSKLAYVYFYLGENDKALEH 135 Query: 117 GEEYITQYPE 126 + + P Sbjct: 136 AKRSVQLNPR 145 >gi|320581103|gb|EFW95325.1| General transcriptional co-repressor [Pichia angusta DL-1] Length = 860 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 21/68 (30%), Gaps = 9/68 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 Y +++ +Q++ AYE F P + Y +Y+ A Sbjct: 288 YYLGRVYMSKQDYPNAYEAFQHAVNIDSRNP-TFWC-----SIGVLYYKISQYKDALDAY 341 Query: 118 EEYITQYP 125 I P Sbjct: 342 TRAIRLNP 349 >gi|299744482|ref|XP_001831066.2| DnaJ domain-containing protein [Coprinopsis cinerea okayama7#130] gi|298406147|gb|EAU90688.2| DnaJ domain-containing protein [Coprinopsis cinerea okayama7#130] Length = 594 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 38/130 (29%), Gaps = 21/130 (16%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 + L A G + A + + P S L G+ R Sbjct: 255 RVELELA-----RGSWDAAGIAANDALRLSPNSPE---ALTLRGLVLFLTGRLSS----- 301 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 L ++ + + R V ++L + G + KRG V A+ R+ Sbjct: 302 ---SLTHLQNALRLDPGHEKAQKLRKRVKDV-DRLKEE----GNVFFKRGGLVEAVERYT 353 Query: 215 LVLANYSDAE 224 L +E Sbjct: 354 EALEKIGQSE 363 >gi|251791828|ref|YP_003006548.1| protein 1057 [Aggregatibacter aphrophilus NJ8700] gi|247533215|gb|ACS96461.1| protein 1057 [Aggregatibacter aphrophilus NJ8700] Length = 204 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 7/107 (6%) Query: 13 EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72 +AW + YKF + F IA + GW S + Y++ ++ A ++ Sbjct: 15 KAWWNENYKFIIVCFV-IAFGGVFGWNYWQSHQIQKIHSASAEYEQALFNYA------KD 67 Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 E F+Q ++ A +LL A + + A ++ Sbjct: 68 PKAQAEQFSQFIKNHEKTSYAVLALLDKAKIAVENNDFTLAEDALKQ 114 >gi|226490843|ref|NP_001149123.1| LOC100282745 [Zea mays] gi|195624896|gb|ACG34278.1| suppressor of G2 allele of SKP1 [Zea mays] Length = 361 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 28/86 (32%), Gaps = 12/86 (13%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQA 113 ++ KA + +F A E ++Q P A ++ G Y +A Sbjct: 2 AASDLESKAKEAFVDDDFELATELYSQAIDAGPATADLYADRAQ-----AHIKLGNYTEA 56 Query: 114 ASLGEEYITQYP-ESKNVDYVYYLVG 138 + + I P K YY G Sbjct: 57 VADANKAIELDPMMHK----AYYRKG 78 >gi|219684521|ref|ZP_03539464.1| TPR domain protein [Borrelia garinii PBr] gi|219685809|ref|ZP_03540618.1| TPR domain protein [Borrelia garinii Far04] gi|219671883|gb|EED28937.1| TPR domain protein [Borrelia garinii PBr] gi|219672642|gb|EED29672.1| TPR domain protein [Borrelia garinii Far04] Length = 379 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 71/212 (33%), Gaps = 36/212 (16%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 K+ N+ KA Y+ +C P +L + Y++A + EEY+ PE+ Sbjct: 70 KKNNYDKAIVYYQRCLVKHPNNNY---ALFGLGDCYRNLDDYKKATDIWEEYLKYDPENI 126 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180 V V SY ++ + + Q +++E + Y + Sbjct: 127 T---VLTRVAASYRKL--------KNFQKSKQTYLKVMELMPENDYALVGIGHLYYDFKE 175 Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 Y + L E+ IG Y K E+ I F+ L + A Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGIYFFKKALEI---SPSNFYA 232 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + L + Y EA + I E+ P+ Sbjct: 233 VFGLADCYRGNKDYKEALKYWLDIVEKDPKNN 264 >gi|223940517|ref|ZP_03632365.1| Peptidoglycan-binding LysM [bacterium Ellin514] gi|223890798|gb|EEF57311.1| Peptidoglycan-binding LysM [bacterium Ellin514] Length = 261 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 19/145 (13%), Positives = 46/145 (31%), Gaps = 15/145 (10%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--RKSLLMSAFVQYSAGKYQQAASLGEEY 120 + +F A + F + + P + A + L A E++ Sbjct: 27 TGKSQVNSMDFQSAIDSFEKALQVNPRSASAHFELAWLYEGD---KIDDPAAAIYHYEQF 83 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + P S D V + ++ V + + + + +++ K + Sbjct: 84 LKLRPNSDKTDVVKMHINSCKQKIASSVSVIGQMSPERQRELEKLL------AENKDLKE 137 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGE 205 V +++++ E YY+ R Sbjct: 138 QVAALKDRVSKWE----AYYVSRQA 158 >gi|158339402|ref|YP_001520579.1| TPR domain-containing protein [Acaryochloris marina MBIC11017] gi|158309643|gb|ABW31260.1| TPR domain protein [Acaryochloris marina MBIC11017] Length = 1346 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 71/207 (34%), Gaps = 38/207 (18%) Query: 64 AVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +L+ + + +A FN P + + FV ++ +YQ A + + Sbjct: 761 GMLYHSQGRYQEALAQFNQGIAIDPKNPIN-YSGQ-----GFVYFAQKQYQDAIAAHTKA 814 Query: 121 ITQYPESKNVDY-----VY-----YLVGMSYA-QMIRDVPYDQ---RATKLMLQYMSRIV 166 I P+S N DY VY Y ++ + IR P D +++ Sbjct: 815 IELEPDSAN-DYFSRANVYITTQQYQDAIADLTKAIRLAPPDPIYFNNRGDAYDALNQ-- 871 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA--NYSD-- 222 + ++ N A + +G Y + +Y AI +F + ++ Sbjct: 872 ---PEAALADYSQAIEVDKNNTRAY--IGLGTVYQRARQYQRAIAQFDKAIEVADFPQKL 926 Query: 223 -AEHAEEAMARLVEA--YVALALMDEA 246 + + +A Y L +++A Sbjct: 927 ETDKKYKGLAYSARGFLYSDLGKLEQA 953 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 8/67 (11%), Positives = 21/67 (31%), Gaps = 10/67 (14%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + +Y +A + + I P ++ +Y + Y Q + + Sbjct: 561 WRLEQYAEALAAFDRAIQLNPSFVHL--AWYGKALVY--------RSQENFPAAETALLK 610 Query: 165 IVERYTN 171 ++ N Sbjct: 611 VLNLKPN 617 >gi|150398795|ref|YP_001322562.1| hypothetical protein Mevan_0035 [Methanococcus vannielii SB] gi|150011498|gb|ABR53950.1| Tetratricopeptide TPR_2 repeat protein [Methanococcus vannielii SB] Length = 402 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 54/157 (34%), Gaps = 32/157 (20%) Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 Y GKY++A + + E+ N YYL G S ++ TKL ++ + Sbjct: 23 YKLGKYEKAIEKANKVLNIGSENSN---AYYLKGSSCWRL--------GKTKLAKEFFEK 71 Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 + + + N L G + I L N S+ Sbjct: 72 ALTYEPENI---KFIQKYSSLLNYL--------------GNFRETIN----FLTNLSNLT 110 Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 EE + L +AY L ++A + I E +P+ Sbjct: 111 DKEEILEILGDAYENLGNFEKAVDCYEKILEIFPKNN 147 >gi|91086913|ref|XP_971407.1| PREDICTED: similar to protein phosphatase-5 [Tribolium castaneum] gi|270009672|gb|EFA06120.1| hypothetical protein TcasGA2_TC008963 [Tribolium castaneum] Length = 489 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 30/155 (19%) Query: 51 VTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARKSLLMSAFVQ 104 ++ E Y +A + K+QN++ A E + + P + +F Sbjct: 12 TPELVEAGERYKAEANEYFKKQNYNAAIELYTKAIEANPNVAIYYG--------NRSFAY 63 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + A + + I + YV +Y ++ + K L+ Sbjct: 64 LKTECFGYALADASKAIEL-----DKGYVKGFYRRAAAHMSL--------GKFKEALKDY 110 Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLA-AKEVEI 196 + + N K +LA K + + Sbjct: 111 EYVTKVRPNDKDAKSKYTECNKIVKKLAFEKAISV 145 >gi|302391014|ref|YP_003826834.1| SpoIID/LytB domain protein [Acetohalobium arabaticum DSM 5501] gi|302203091|gb|ADL11769.1| SpoIID/LytB domain protein [Acetohalobium arabaticum DSM 5501] Length = 708 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 27/189 (14%), Positives = 61/189 (32%), Gaps = 28/189 (14%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 TD Y+ L+ +++A + Q + + + L A + Y Sbjct: 106 TDSDEHSVYYDLGELYYSLGKYNQALKNTKQAVEYIENEAILKLAYLKLAQIHKERSDYH 165 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A S ++ + + YY Y+ I+D DQ + + + + + Sbjct: 166 LALSAVKQALKL---DPDSAVAYY-----YSGQIKDR-LDQ--LQEAVADYKQALNKD-- 212 Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231 ++++ Y K +Y A ++ +L + + A+ + Sbjct: 213 ---------------GSFVEAQLDLADDYFKLEKYKEAKKLYKKILERNGEFKIAQTRLD 257 Query: 232 RLVEAYVAL 240 R+ E L Sbjct: 258 RIEEIKPDL 266 >gi|297262050|ref|XP_001101625.2| PREDICTED: transmembrane and TPR repeat-containing protein 1-like [Macaca mulatta] Length = 882 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 28/230 (12%), Positives = 59/230 (25%), Gaps = 64/230 (27%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A + +A ++ + +P A +L +A ++ Sbjct: 487 YNYANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLI------RDTAEAKMYYQKA 540 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +P+ + +G ++ Q + + + ++ A Sbjct: 541 LQLHPQHNR---ALFNLG--------NLLKSQEKKEEAITLLKDSIKYGPE---FADAYS 586 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF--------------------QLVLANY 220 + LA +E R+ Y A I + +A+Y Sbjct: 587 SLASL---LAEQE----RFKEAEEIYQAGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHY 639 Query: 221 SD----AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 + AM L Y +L A E W + Sbjct: 640 QQAIKLSPSHHVAMVNLGRLYRSLGENSMAEE-------------WYKRA 676 >gi|224060578|ref|XP_002190113.1| PREDICTED: similar to leprecan-like 1 [Taeniopygia guttata] Length = 655 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNV-DYVYYLVGM 139 F Y G Y +A + Y+ +P+ ++V + Y G+ Sbjct: 261 FAYYRVGDYVKALECAKSYLLFHPDDEDVLENAGYYKGL 299 >gi|256004184|ref|ZP_05429167.1| TPR repeat-containing protein [Clostridium thermocellum DSM 2360] gi|281419440|ref|ZP_06250454.1| TPR repeat-containing protein [Clostridium thermocellum JW20] gi|255991774|gb|EEU01873.1| TPR repeat-containing protein [Clostridium thermocellum DSM 2360] gi|281406846|gb|EFB37110.1| TPR repeat-containing protein [Clostridium thermocellum JW20] gi|316939648|gb|ADU73682.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium thermocellum DSM 1313] Length = 591 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y K V + +++A E +N+ P F +++ L + K+++A + Sbjct: 68 YNKGVALFNLKKYNEAIESYNRSIELAPNF----KEAYLNKSICLLVVSKFEEALETVNK 123 Query: 120 YITQYPESKN 129 +I P N Sbjct: 124 FIEMSPNEPN 133 Score = 35.9 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 13/119 (10%), Positives = 35/119 (29%), Gaps = 18/119 (15%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQ 112 + + + + +A + +N+ P + + ++ KY + Sbjct: 28 DSAMQYFSEGNSLFEAGKIEEAIQSYNKAIELNP-----NLAEIHYNKGVALFNLKKYNE 82 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A I P K Y + + + + L+ +++ +E N Sbjct: 83 AIESYNRSIELAPNFKE---AYLNKSICLLVVSK--------FEEALETVNKFIEMSPN 130 >gi|91201886|emb|CAJ74946.1| hypothetical protein kuste4184 [Candidatus Kuenenia stuttgartiensis] Length = 423 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 63/201 (31%), Gaps = 33/201 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++L A F++ + P A + Y G A + ++ I Sbjct: 198 GQIYLNNGLPDNALNAFSKVTEINP--RHA-LAHYHLGLTFYEKGNVDGAVASYKKSIEI 254 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 ++ V+Y +G+ Y+ D++ ++ +V+ ++ A + + Sbjct: 255 DAKNPQ---VHYSLGIVYS--------DEKLFDNAIEEFRTVVKLDPDN---ADAHYRLG 300 Query: 184 VG-------------RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 + + A+ I Y + AI Q+ + + E Sbjct: 301 LAYANKRTLVKAVSSVQKAASAHYNIKNPYSDKRALDEAITSLQMAIEINP---YNPEIY 357 Query: 231 ARLVEAYVALALMDEAREVVS 251 L AY +DEA + Sbjct: 358 FDLGNAYSQDRRLDEAARALE 378 >gi|186684576|ref|YP_001867772.1| hypothetical protein Npun_F4462 [Nostoc punctiforme PCC 73102] gi|186467028|gb|ACC82829.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102] Length = 160 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 18/116 (15%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASL 116 E+ +++ L ++A +D P FA R++ L YS G YQ++ + Sbjct: 42 EIIDRSQKLLDAGEIAEAETALTALIKDQPDFAEAWNRRAFL-----YYSIGDYQKSLAD 96 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + + P + +G+ YA + ++ R +E S Sbjct: 97 CQMVVQINPIHFG---ALHGMGLCYAAL--------GEYGEAIRAFKRALEIQPYS 141 >gi|317501592|ref|ZP_07959786.1| hypothetical protein HMPREF1026_01730 [Lachnospiraceae bacterium 8_1_57FAA] gi|316897009|gb|EFV19086.1| hypothetical protein HMPREF1026_01730 [Lachnospiraceae bacterium 8_1_57FAA] Length = 440 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 27/76 (35%), Gaps = 7/76 (9%) Query: 62 EKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + L +++ A + ++ + + ++LL A +G + A + Sbjct: 358 AEGTQALNSGDYAGAIDPLSKVVLMNEGYNDG----QALLNLAQAYKGSGDNENATVYFQ 413 Query: 119 EYITQYPESKNVDYVY 134 + I +Y S+ Sbjct: 414 KVIEKYAGSEYAAEAQ 429 >gi|301614003|ref|XP_002936487.1| PREDICTED: hypothetical protein LOC100494861 [Xenopus (Silurana) tropicalis] Length = 434 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 18/124 (14%), Positives = 38/124 (30%), Gaps = 26/124 (20%) Query: 58 REVYEKAVLFLKEQNFSKAYEYF-NQC-----SRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 R++ E + +++E N++KA E F + F ++ Y Sbjct: 126 RQLAELGINYVQEGNYTKAVELFSEAIGLDPEDYRY-FG--------NRSYCYEQLKLYP 176 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 +A E I S + Y+ G + +R + +++ N Sbjct: 177 EALMDAEVSIEL---SPDCPKGYFRKG----RALRGCSR----IVEAEEAFKMVLQLDQN 225 Query: 172 SPYV 175 Sbjct: 226 CEEA 229 >gi|261414452|ref|YP_003248135.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261370908|gb|ACX73653.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327530|gb|ADL26731.1| tetratricopeptide repeat protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 347 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 60/196 (30%), Gaps = 34/196 (17%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + + KA + + ++ +Y+ D + GK + A Sbjct: 42 AADDFFFKANELYDQGRYKESVKYYRAAIDD---GRYEPFAWFNLGNALVQLGKKEVAMV 98 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + P+ ++ ++ D+ Y + + +R +E T + ++ Sbjct: 99 AYKRTVELLPD--------FVKA---WMLLGDLYYLAESPSDAIVAYNRAIELGTETDHI 147 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + Y+K ++ A F+ LA D +A L E Sbjct: 148 -----------------HFALAECYMKGSDWTLAQKHFERALALNPD---RMDAWYGLAE 187 Query: 236 AYVALALMDEAREVVS 251 Y L + A + + Sbjct: 188 VYEKLGDYEYAVKTLK 203 >gi|240146185|ref|ZP_04744786.1| putative tetratricopeptide repeat-containing domain protein [Roseburia intestinalis L1-82] gi|257201719|gb|EEV00004.1| putative tetratricopeptide repeat-containing domain protein [Roseburia intestinalis L1-82] Length = 454 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 35/89 (39%), Gaps = 9/89 (10%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SL + Y++ K++++ + ++ + K+ Y Y + +Y Sbjct: 373 SLYNQGYSDYNSQKFEESITSLQKVVDMEETYKD-GYALYYLAQAY--------RKNNDL 423 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTV 184 + Y +IVE Y + A+ Y+ + Sbjct: 424 ETAKTYYQKIVELYPGTERAANAQNYINI 452 >gi|170062990|ref|XP_001866910.1| TPR repeat-containing protein [Culex quinquefasciatus] gi|167880758|gb|EDS44141.1| TPR repeat-containing protein [Culex quinquefasciatus] Length = 1128 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 40/110 (36%), Gaps = 18/110 (16%) Query: 158 MLQYMSRIVERYTNSPYVKGA-------RFYVTVGRNQLAA-KE---------VEIGRYY 200 L +++ + + + + R+ A +E + I Y Sbjct: 631 ALAIYKQVLRNDPKNIWAANGIGAVLAHKGCIIEARDIFAQVREATADFCDVWLNIAHIY 690 Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 +++ +Y++AI ++ L + + + M L AY + EA+ + Sbjct: 691 VEQKQYISAIQMYENCLKKFYKHNNV-DVMQYLARAYFRAGKLKEAKMTL 739 >gi|125975528|ref|YP_001039438.1| TPR repeat-containing protein [Clostridium thermocellum ATCC 27405] gi|125715753|gb|ABN54245.1| TPR repeat domain containing protein [Clostridium thermocellum ATCC 27405] Length = 591 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y K V + +++A E +N+ P F +++ L + K+++A + Sbjct: 68 YNKGVALFNLKKYNEAIESYNRSIELAPNF----KEAYLNKSICLLVVSKFEEALETVNK 123 Query: 120 YITQYPESKN 129 +I P N Sbjct: 124 FIEMSPNEPN 133 Score = 35.9 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 13/119 (10%), Positives = 35/119 (29%), Gaps = 18/119 (15%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQ 112 + + + + +A + +N+ P + + ++ KY + Sbjct: 28 DSAMQYFSEGNSLFEAGKIEEAIQSYNKAIELNP-----NLAEIHYNKGVALFNLKKYNE 82 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A I P K Y + + + + L+ +++ +E N Sbjct: 83 AIESYNRSIELAPNFKE---AYLNKSICLLVVSK--------FEEALETVNKFIEMSPN 130 >gi|11692645|gb|AAG39913.1|AAG39913 aspartly beta-hydroxylase [Mus musculus] Length = 689 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 3/67 (4%) Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252 E++ KRG+ A+ F+ ++ Y + A + LA + EV+ Sbjct: 275 ELDAAEKLRKRGKIEEAVNAFEELVRKYPQSP---RARYGKAQCEDDLAEKQRSNEVLRR 331 Query: 253 IQERYPQ 259 E Y + Sbjct: 332 AIETYQE 338 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 17/80 (21%) Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 + + + +V +Y SP + + + LA K +R V Sbjct: 283 RKRGKIEEAVNAFEELVRKYPQSPRARYGKA---QCEDDLAEK---------QRSNEV-- 328 Query: 210 IPRFQLVLANYSDAEHAEEA 229 + + Y +A +A Sbjct: 329 ---LRRAIETYQEAADLPDA 345 >gi|95931319|ref|ZP_01314034.1| TPR repeat [Desulfuromonas acetoxidans DSM 684] gi|95132620|gb|EAT14304.1| TPR repeat [Desulfuromonas acetoxidans DSM 684] Length = 718 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 23/184 (12%), Positives = 55/184 (29%), Gaps = 41/184 (22%) Query: 58 REVYEKAVLFLKEQNFSKAYEYF---NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 ++ A L++ N ++A + + + +S A + GK ++A Sbjct: 5 DKILAAAQKHLQKNNLARAVKEYLKVLKIDDRD------VRSRQKLAELYSRLGKTEEAL 58 Query: 115 SLGEEYITQYPESKNVDYV---YYLVGMSYAQMIRDVP--------------YDQRATKL 157 + E + Y +YL ++ + ++ + Q Sbjct: 59 TEYE--------TVAAHYAENTFYLKAIAVYKQMQKLDPQNTAYTLKLAKLNEQQGLVGN 110 Query: 158 MLQYMSRIV---ERYTNSPYVKGARFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPR 212 L ++ ++Y + N ++ +Y K + AI Sbjct: 111 ALSEYRVLLQHHQQYQEHDEAIKVLLRMQELDPENITIG--MQTAEFYAKIDKTDEAIQA 168 Query: 213 FQLV 216 F+ V Sbjct: 169 FEKV 172 >gi|116622913|ref|YP_825069.1| TPR repeat-containing serine/threonin protein kinase [Candidatus Solibacter usitatus Ellin6076] gi|116226075|gb|ABJ84784.1| serine/threonine protein kinase with TPR repeats [Candidatus Solibacter usitatus Ellin6076] Length = 947 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 10/68 (14%), Positives = 24/68 (35%), Gaps = 5/68 (7%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR----KSLLMSAFVQYSAGKYQQAAS 115 +Y + +LK +A F + F ++ + L +G +A + Sbjct: 860 IYVRGEAYLKAHQSVQAAAEFQKIVD-HRFLVLSDCIGALAHLELGRAYAMSGDLAKAKA 918 Query: 116 LGEEYITQ 123 +++T Sbjct: 919 AYNDFLTL 926 >gi|58265542|ref|XP_569927.1| phosphoprotein phosphatase [Cryptococcus neoformans var. neoformans JEC21] gi|134108853|ref|XP_776541.1| hypothetical protein CNBC0350 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259221|gb|EAL21894.1| hypothetical protein CNBC0350 [Cryptococcus neoformans var. neoformans B-3501A] gi|57226159|gb|AAW42620.1| phosphoprotein phosphatase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 586 Score = 36.6 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 57/177 (32%), Gaps = 25/177 (14%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQR--EVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 S+A L +T+ + E+ A K++NFSK+ +++ Q Sbjct: 50 SLAGLSLGSDGVFEPEVDDNKVITEEETAKALELKALANKAFKDKNFSKSIDFYTQAIAL 109 Query: 87 FPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYA 142 P +++ + ++ A S + + P Y +Y G+S Sbjct: 110 NPKEPTFWNNRAM-----SKAKMEEHGGAISDATKAVELNPS-----YAKAFYRRGLSQL 159 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA-AKEVEIGR 198 ++R + + + + ++ T ++ K + +G Sbjct: 160 AILRPTD--------AVSDFKKALAIEPGNKTIRDQLSITTKLIRRIEFEKAISVGE 208 >gi|332993197|gb|AEF03252.1| beta-lactamase class C family protein [Alteromonas sp. SN2] Length = 469 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + VY D+ R + E + LK +++++A++ F FP A ++ AF Sbjct: 373 KQVYNDNGYSRFIGRTINEVGMGLLKTKSWTEAFDMFEYLVSLFPN---APQAYDSLAFA 429 Query: 104 QYSAGKYQQAASL 116 S G + A S Sbjct: 430 YLSKGDSEAAKST 442 >gi|330840509|ref|XP_003292257.1| hypothetical protein DICPUDRAFT_50293 [Dictyostelium purpureum] gi|325077520|gb|EGC31227.1| hypothetical protein DICPUDRAFT_50293 [Dictyostelium purpureum] Length = 981 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 48/139 (34%), Gaps = 29/139 (20%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A + + N+ KA + + + + + L + + G+ +A + + Sbjct: 178 ACILFNKGNYIKALDTYQKVIQQN--SNCLPAVRLGLGYCYFKLGRNNKAKEAFKRVLEL 235 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY---TNSPYVKGARF 180 + D V ++G+S ++ D D + M+ I+E Y +P Sbjct: 236 -----DRDNVEAMIGLSLV-LMNDNQID--------EAMNLILEAYQLAPTNP------- 274 Query: 181 YVTVGRNQLAAKEVEIGRY 199 + N LA G + Sbjct: 275 ---IVLNHLANHYFYRGEF 290 >gi|315122115|ref|YP_004062604.1| hypothetical protein CKC_01825 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495517|gb|ADR52116.1| hypothetical protein CKC_01825 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 296 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 68/222 (30%), Gaps = 42/222 (18%) Query: 22 FALTIFFSIAVCFLVGW--ERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYE 78 +++ I CFL+ ++++ V EVY + V+ +F K+ + Sbjct: 35 LVVSLISLIQGCFLLDGVRSKRANISSLNSVVHAHPSDPEVYNVRGVVHGMNGDFEKSLQ 94 Query: 79 YFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 F P + ++L+ Y G A + + P N D Y Sbjct: 95 DFQSALDLNPSYYKAYVNRALIE-----YKMGNVPMAIKDYDAALKINP---NYDIAYIG 146 Query: 137 VGMSYAQMIRDVPYDQR--ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 G Y D++ ++ R ++ T+ R V R + Sbjct: 147 RGNVY--------RDEKYGDSQKAFADFDRAIQLKTSDGRAWFGRALVYQLRK---EHQK 195 Query: 195 EI--------------GRYYLKRG-EYVAAIPRFQLVLANYS 221 I YY RG Y+A + L ++ Sbjct: 196 AIGDFSRAISLSAITPADYYNGRGVSYLAVKN-YDSALEDFK 236 >gi|253583593|ref|ZP_04860791.1| predicted protein [Fusobacterium varium ATCC 27725] gi|251834165|gb|EES62728.1| predicted protein [Fusobacterium varium ATCC 27725] Length = 144 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 8/63 (12%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASL 116 +++ + + N+ +A F + + F+ + + + Y G+++ A Sbjct: 49 DIFIQGKNAYRNGNYEEAQSKFETLLKSYSFSPILKNNYAFYFIGMTYYKMGEWKNAVYY 108 Query: 117 GEE 119 E+ Sbjct: 109 LEK 111 >gi|242241287|ref|YP_002989468.1| cellulose synthase operon C domain protein [Dickeya dadantii Ech703] gi|242133344|gb|ACS87646.1| cellulose synthase operon C domain protein [Dickeya dadantii Ech703] Length = 1331 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 54/182 (29%), Gaps = 36/182 (19%) Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 S R DV + +A L N ++A Q + FP G L A Sbjct: 445 SVRQSVTPKPVDVSDP--LRAQAKQELAAGNTARAIGLLQQGMQRFPNDGW---VRLDLA 499 Query: 102 FVQYSAGKYQQAASLGEEYITQYP-ESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLML 159 + G AA+L + P + N Y + ++ Sbjct: 500 RIYRQQGDTASAATLMQ------PLQRPNATPDDLYAAALFASES------------EAW 541 Query: 160 QYMSRIVERYT---NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP--RFQ 214 Q S ++ R + V+ V ++ + YL RGE AA R Sbjct: 542 QQSSSLLTRIPPRNQNQAVRDLSQRVNF------NLQMATAQVYLSRGENAAAANTLRAL 595 Query: 215 LV 216 V Sbjct: 596 TV 597 >gi|240146978|ref|ZP_04745579.1| putative sensor histidine kinase [Roseburia intestinalis L1-82] gi|257200849|gb|EEU99133.1| putative sensor histidine kinase [Roseburia intestinalis L1-82] gi|291535246|emb|CBL08358.1| Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain [Roseburia intestinalis M50/1] Length = 485 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 3/64 (4%) Query: 128 KNVDYVYYLVGMSY--AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 +++DYV Y++ ++ A+ + D Q+ K + + E +S Y K + Sbjct: 61 EDIDYVMYIIVVNSERAEELVDTQKPQKMIKEAREVFGELAED-ADSAYAKQRLSRILKS 119 Query: 186 RNQL 189 + L Sbjct: 120 LDTL 123 >gi|256394576|ref|YP_003116140.1| hypothetical protein Caci_5440 [Catenulispora acidiphila DSM 44928] gi|256360802|gb|ACU74299.1| TPR repeat-containing protein [Catenulispora acidiphila DSM 44928] Length = 148 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 39/100 (39%), Gaps = 6/100 (6%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 D + + Y + V L+ + + A + + ++ P + ++ A Sbjct: 9 DAEDGTGEPTGEAADWYRQGVQLLEAGDPAAAAQLLTKVAQKTPDSAPVLEA---LARAH 65 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144 + G Y++A E + S + DY + G++ A++ Sbjct: 66 FDGGLYERAV---ESFAQLAHVSPDDDYAQFGWGLAAAKL 102 >gi|228942153|ref|ZP_04104693.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975082|ref|ZP_04135641.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981722|ref|ZP_04142017.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus thuringiensis Bt407] gi|228777834|gb|EEM26106.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus thuringiensis Bt407] gi|228784603|gb|EEM32623.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817487|gb|EEM63572.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 273 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 24/66 (36%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 +Q+ K LT S ++ L + + L E+ EKA L+++ Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60 Query: 76 AYEYFN 81 + F Sbjct: 61 EIKKFQ 66 >gi|226944845|ref|YP_002799918.1| glycosyl transferase [Azotobacter vinelandii DJ] gi|226719772|gb|ACO78943.1| glycosyl transferase,TPR repeat protein [Azotobacter vinelandii DJ] Length = 1221 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 75/199 (37%), Gaps = 42/199 (21%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLGEEY 120 + ++++N+ +A E + +P + +A K +LL + + QQA + Sbjct: 1 MQLVQKRNYPEAAELAAVLTERYPDSPLAWKVWGLALLE-------SRRPQQAIEVLHRA 53 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 PE + + +G++Y + Q + Y+ + +E + A+ Sbjct: 54 DGIDPEDPDT---LHNLGIAYLK--------QGNIQKADHYLGQALEVLPSF-----AKA 97 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 + + + ++ G+Y AA+ Q+ +A A + ++ A L Sbjct: 98 RLVLAKMRI------------DTGQYQAALE--QIAIAEEKGANEN-QCLSLKAFALNKL 142 Query: 241 ALMDEAREVVSLIQERYPQ 259 E +V I+ RYP Sbjct: 143 HRHTETLQVQEEIRRRYPD 161 >gi|222056118|ref|YP_002538480.1| hypothetical protein [Geobacter sp. FRC-32] gi|221565407|gb|ACM21379.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. FRC-32] Length = 573 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 62/194 (31%), Gaps = 38/194 (19%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 ++ + L L E + A + P A K+ A + +YQ A E+ Sbjct: 49 IFSLSRLHLLEGDLDGALSLLQAAAEADPQAAYIHKAE---AQIYLQMNRYQDALQACEK 105 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I L G + RD K + Y + +E A+ Sbjct: 106 AIKL---DPEFAEAQILAGNILVALQRD--------KDAIPYYKKAIELEP-------AK 147 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM--ARLVEAY 237 + + + I YLK EY A+ + ++ D+ A+ L + Y Sbjct: 148 EDIYL--------HLAIA--YLKTFEYEGAVNTLKALIKVSPDS-----ALGYYYLGKTY 192 Query: 238 VALALMDEAREVVS 251 + L +EA + Sbjct: 193 DQMKLSNEAIKYYK 206 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 76/200 (38%), Gaps = 35/200 (17%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + Y A + + ++F A E F + + ++ A++ G+ + Sbjct: 314 DPEAYQVRYYLASTYEEMEDFETAIEEFKKIPTS---STYYYDAVGHLAYLYKEMGQEAK 370 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 L +E I + P ++ L G+ Y M R V LQ +S I +R+ + Sbjct: 371 GIQLLKESIAEQPT--KIELYLNLAGL-YESMDRFVD--------GLQVLSEIDDRFPSD 419 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 P + F + V +++ K+ A+I R + VL + +A+ Sbjct: 420 PRL---NFRMGVLYDKIGNKD--------------ASIARMKKVL---QLTPNDVQALNY 459 Query: 233 LVEAYVALALM-DEAREVVS 251 L Y L + DEA + + Sbjct: 460 LGYTYAELGVNLDEALQYLK 479 >gi|254409909|ref|ZP_05023689.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] gi|196182945|gb|EDX77929.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] Length = 956 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 49/153 (32%), Gaps = 27/153 (17%) Query: 105 YSAGKYQQAASLGEEYITQYP-----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y+ GKY +A L E + Y + ++ Y +G+ Y R + + L Sbjct: 68 YNQGKYNEAIPLAERMLRLYQSVYGEDHLDITYSLNYLGILYRNQGRYTEAEP-LYRQAL 126 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 + R++ P+V + + Y +G Y A P ++ L Sbjct: 127 EMKKRLLGE--EHPHVATSLNNLAYL--------------YESQGRYTEAEPLYRQALEM 170 Query: 220 YSDA-----EHAEEAMARLVEAYVALALMDEAR 247 Y ++ L Y + EA Sbjct: 171 YKRLLGEEHPLVATSLNNLAYLYESQGRYTEAE 203 >gi|172037164|ref|YP_001803665.1| hypothetical protein cce_2249 [Cyanothece sp. ATCC 51142] gi|171698618|gb|ACB51599.1| hypothetical protein cce_2249 [Cyanothece sp. ATCC 51142] Length = 232 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 26/82 (31%), Gaps = 10/82 (12%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + N+ A + +Q P + + L+ Y QA + + I Sbjct: 50 KQEANQGNYDSAIGFLDQLIARRPHSAIDYNNRGLM-----YLKTANYDQAMTDFNQAIA 104 Query: 123 QYPESKNVDYVYYLVGMSYAQM 144 P+ +D Y G YA Sbjct: 105 LNPQ---LDRAYNNRGNCYAHQ 123 >gi|220915045|ref|YP_002490353.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060] gi|219952796|gb|ACL63186.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060] Length = 392 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 26/126 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASL 116 + ++ + + +A +N+ R P L+SA+ + Y+ G Y A + Sbjct: 133 NRGYIYQNKHEYDRAIADYNEAIRINP--------ELVSAYFNRGLIYYNMGNYDLAIAD 184 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT--NSPY 174 I P K+ Y G++Y + + S Y Sbjct: 185 YGNAIRIEPNHKS---AYNNRGLAYFGK--------GEYDRAISDYDEAIRIDPSYTSAY 233 Query: 175 VKGARF 180 + A Sbjct: 234 INRANL 239 >gi|330445565|ref|ZP_08309217.1| mechanosensitive ion channel family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489756|dbj|GAA03714.1| mechanosensitive ion channel family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 1087 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 28/64 (43%), Gaps = 5/64 (7%) Query: 50 SVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108 + Q Y+ A L++ ++F++A + + + +P A K + +SA Sbjct: 42 KTPETVKQLAAYQAAQNQLEKIKDFNQATRRYEELTETYPEQKSAIKEQID----NFSAT 97 Query: 109 KYQQ 112 ++ + Sbjct: 98 EFPE 101 >gi|323966049|gb|EGB61489.1| cellulose synthase operon protein C [Escherichia coli M863] gi|327251176|gb|EGE62869.1| cellulose synthase operon protein C [Escherichia coli STEC_7v] Length = 1157 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 62/210 (29%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARSVDNTDSYAVLGLGDVAMA---RKDYSAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + K+G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALEKQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + ++ P Y L Sbjct: 508 AGQRSQADTLMRNLVQQKPNDPEQVYAYGL 537 >gi|323944499|gb|EGB40571.1| cellulose synthase operon protein C [Escherichia coli H120] Length = 1157 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 77/237 (32%), Gaps = 38/237 (16%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQY-PESKNVDYVY--YLVG-------MSYAQMIRDV 148 + + AG+ QA + Q+ P Y Y YL G +++ I + Sbjct: 500 RLSQDLWQAGQRSQA-DTLMRNLAQHKPNDPEQVYAYGLYLSGHDQDRAALAH---INSL 555 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEI 196 P Q + +V R S V + G+ A ++ + Sbjct: 556 PRAQWN-----SNIQELVNRL-QSDQVMETANRLRESGKEAEAEAMLRQQPPSTRIDLTL 609 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 610 ADWAQQRRDYTAARAAYQNVLTLEPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 60/210 (28%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + + P Y L Sbjct: 508 AGQRSQADTLMRNLAQHKPNDPEQVYAYGL 537 >gi|302679176|ref|XP_003029270.1| hypothetical protein SCHCODRAFT_236477 [Schizophyllum commune H4-8] gi|300102960|gb|EFI94367.1| hypothetical protein SCHCODRAFT_236477 [Schizophyllum commune H4-8] Length = 613 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 4/54 (7%), Positives = 18/54 (33%), Gaps = 3/54 (5%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 ++ + + ++++A +++ + L A + +A Sbjct: 377 LFTQGNAAFRRGDYAQAVKHYEAA---YQTEPELPHYQLNIAAAHLKLSNWIEA 427 >gi|257468916|ref|ZP_05633010.1| Tetratricopeptide TPR_2 repeat protein [Fusobacterium ulcerans ATCC 49185] gi|317063164|ref|ZP_07927649.1| predicted protein [Fusobacterium ulcerans ATCC 49185] gi|313688840|gb|EFS25675.1| predicted protein [Fusobacterium ulcerans ATCC 49185] Length = 192 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 51/131 (38%), Gaps = 18/131 (13%) Query: 70 EQNFSKAYEYFNQCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 +++++ A + + + P A ++ Y Y+ A + + P++ Sbjct: 51 KRDYNGAIKLYEKIVNTNPENADYAAF----LGYLYYENENYENAIDYFNKSLEIAPDNS 106 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ--YMSRIVERYTNSPYVKGARFYVTVGR 186 + ++L+G +Y++ K + + ++ + ++ A+ Y +G+ Sbjct: 107 ---FAHFLLGNTYSRA--------GLIKEAINSYDFAIFLDLDIYTAHLDFAKKYEAIGQ 155 Query: 187 NQLAAKEVEIG 197 Q A KE I Sbjct: 156 KQRALKEYIIA 166 >gi|303315243|ref|XP_003067629.1| tetratricopeptide repeat containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240107299|gb|EER25484.1| tetratricopeptide repeat containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 854 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 22/145 (15%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSA 107 D + Y ++ + + KAYE + Q P + Y Sbjct: 297 AADTNDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQI 350 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y+ A I P + V+Y +G + + + D L SR E Sbjct: 351 NQYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQIAD------ALDAYSRAAE 400 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAK 192 N+ ++ + + + ++ AA Sbjct: 401 LDPNNVHI---KARLQLLQSGQAAN 422 >gi|222056617|ref|YP_002538979.1| hypothetical protein [Geobacter sp. FRC-32] gi|221565906|gb|ACM21878.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. FRC-32] Length = 228 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 21/166 (12%), Positives = 49/166 (29%), Gaps = 51/166 (30%) Query: 60 VYEKAVL-----FLKEQNFSKAYEYFNQC-SRDFPFAGVARK--SLLMSAFVQYSAGKYQ 111 +Y +A +L+ + + A F + + + + G +Q Sbjct: 75 LYSEARNNLAVNYLEMKRWDDAITQLKLVAEDIF----YQNQDTAAVNLGLAYFGKGDHQ 130 Query: 112 QAASLGEEYITQYPES--------------KNVDY-----------------VYYLVGMS 140 QA ++ ++ YP VD+ +Y + ++ Sbjct: 131 QALAVYRSAVSSYPRDARVRLNLGRVYFALDKVDWAIAEYGKALELSGNYANAHYFLALA 190 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 Y + + K ++ +S + AR YV + + Sbjct: 191 YMKT--------KDNKAAAAAFREVIRIAPDSEIGQFAREYVDMLK 228 >gi|218289603|ref|ZP_03493823.1| transcriptional regulator, XRE family [Alicyclobacillus acidocaldarius LAA1] gi|218240253|gb|EED07436.1| transcriptional regulator, XRE family [Alicyclobacillus acidocaldarius LAA1] Length = 436 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 8/73 (10%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVARKSLLMSAFVQY 105 + + Y +A ++ ++ +A +F S F A Sbjct: 64 ELAGSSEEAHTYRRAKQLAEQGHYEEAIRHFLSLSWPLHTQFR----AELVFQDMGDCYL 119 Query: 106 SAGKYQQAASLGE 118 AG Y+QAA L + Sbjct: 120 KAGDYEQAARLYD 132 >gi|187251528|ref|YP_001876010.1| Tetratricopeptide domain-containing protein [Elusimicrobium minutum Pei191] gi|186971688|gb|ACC98673.1| Tetratricopeptide TPR_2 repeat protein [Elusimicrobium minutum Pei191] Length = 209 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 30/78 (38%), Gaps = 2/78 (2%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D VY + K +++ + + + S + + + S + +GK ++ Sbjct: 52 DGSAAEPVYNMGAAYYKLKDYENSVKMYES-SAKYE-GWLKQNSYFNLGNAYFRSGKQEE 109 Query: 113 AASLGEEYITQYPESKNV 130 A + ++ I P+ K Sbjct: 110 AKAAYKQAILINPQDKEA 127 >gi|108759978|ref|YP_629017.1| hypothetical protein MXAN_0751 [Myxococcus xanthus DK 1622] gi|108463858|gb|ABF89043.1| conserved domain protein [Myxococcus xanthus DK 1622] Length = 726 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 19/162 (11%), Positives = 46/162 (28%), Gaps = 21/162 (12%) Query: 20 YKFALTIFFSIAVC-----FLVGWERQSSRDVYLDSVT--------DVRYQREVYEKAVL 66 + + + C G + T D + + + Sbjct: 14 RSLVIALALLLTACPRSTRTPSGGDTGGDLPSGDPFPTRPSVEAKKDPTADAALAQASQT 73 Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 + KA E + + +P + +L + + + + + A E + + P Sbjct: 74 ARATPDKKKAAEAYLSVRKAYPATTAGQDALYQAGVLFFESKDFVNARKSFNELLFENPL 133 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 D + + +S + A + Q +S + ER Sbjct: 134 HSRADDAKHKLAVSAME--------VGAYRDAYQTLSSLAER 167 >gi|66816601|ref|XP_642310.1| RNA polymerase II complex component [Dictyostelium discoideum AX4] gi|60470113|gb|EAL68093.1| RNA polymerase II complex component [Dictyostelium discoideum AX4] Length = 1106 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 73/212 (34%), Gaps = 26/212 (12%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 ++ ++ +A E+ + P A L Y Y A E+ IT+ P+ Sbjct: 575 QQGDYYEAGEWIREVLDIQPDNQEAWALYGNLHL----YKEEWYP-AQKNFEQ-ITENPD 628 Query: 127 SKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 +KN Y +G Y + ++ Q+ +R++ + + Y + Sbjct: 629 NKNETYASLSLGNIYYNAKFSNPDKVEKYILNAEQFYNRVLTKNPTNIYAANGIGMIIAE 688 Query: 186 RNQL--AA------KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + L A +E V + Y+ +G + AI ++ L + + E Sbjct: 689 KGNLNLAGETFLQIREASMDCIPVSVNLAHIYVSKGLFDNAIKLYEGCLKKSTSPKEIET 748 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + L + Y ++++ + YP Sbjct: 749 IIMYLAKVYFDANRFYDSKQTLKKAIHMYPHN 780 >gi|332232577|ref|XP_003265482.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like [Nomascus leucogenys] Length = 898 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 52/155 (33%), Gaps = 30/155 (19%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP-YDQRAT 155 LL + + + +A ++ + P+ V +S + +Q Sbjct: 772 LLSAIYS--KQENHDKALDAIDKALQLKPKDPKV--------ISELFFTKGNQLREQNLL 821 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVG-RNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 + V+ + A+ ++ +G + +G+YV+A ++ Sbjct: 822 DKAFESYRVAVQLNPD-----QAQAWMNMGGIQHI-------------KGKYVSARAYYE 863 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 L D++ +E +A+L L + E + Sbjct: 864 RALQLVPDSKLLKENLAKLDRLEKRLQEVREKDQT 898 >gi|327537564|gb|EGF24281.1| O-linked GlcNAc transferase [Rhodopirellula baltica WH47] Length = 486 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 26/81 (32%), Gaps = 11/81 (13%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 G+ + A + + + + +V + + R + D + + R Sbjct: 410 ETGQPELAVAAYRGALALHDDYPDV----------HYNLARILE-DLHRSVEAEHHWRRF 458 Query: 166 VERYTNSPYVKGARFYVTVGR 186 ++ SP+ A + R Sbjct: 459 LQLSPGSPWADEAHARLEELR 479 >gi|303327929|ref|ZP_07358368.1| translation initiation factor IF-2 [Desulfovibrio sp. 3_1_syn3] gi|302861755|gb|EFL84690.1| translation initiation factor IF-2 [Desulfovibrio sp. 3_1_syn3] Length = 447 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 50/129 (38%), Gaps = 27/129 (20%) Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 G+Y++A L + + P++ ++Y G++ A R L R+++ Sbjct: 48 GRYEEAYQLYMRLLREEPDNDEINY-----GLALAAART------RRYSQALLAFERLID 96 Query: 168 RYTNSPYVKGARFY--VTVGRNQL-----AAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220 RY A+ + +L A +E+++ R Y + R +L N Sbjct: 97 RYP-----ADAKLRRSLADVYLRLGDRDAARRELDLARQY----DPTLTATRIARILDNL 147 Query: 221 SDAEHAEEA 229 +++ +A Sbjct: 148 ENSQSRFQA 156 >gi|301761928|ref|XP_002916387.1| PREDICTED: tetratricopeptide repeat protein 16-like [Ailuropoda melanoleuca] Length = 856 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 30/133 (22%) Query: 45 DVYLDSVTDVRYQ---REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG----VARKSL 97 D VT + RE Y + + L+++++ A +F++ + A ++ Sbjct: 46 DDVKPKVTGLTVPLKVREYYHQGLQCLEKEDWEMAVLFFSR--ALHLDSQLVDFYALRAE 103 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VYYLVGMSYAQMIRDVPYD 151 + AA + P +N Y V YL G + + Sbjct: 104 -----AYIQLCDFSSAAQNLRRAYSFQP--ENTKYLERLTLVLYLQGQCLFEQL------ 150 Query: 152 QRATKLMLQYMSR 164 A + L+ + Sbjct: 151 --AFREALKVFLQ 161 >gi|262194577|ref|YP_003265786.1| hypothetical protein Hoch_1336 [Haliangium ochraceum DSM 14365] gi|262077924|gb|ACY13893.1| hypothetical protein Hoch_1336 [Haliangium ochraceum DSM 14365] Length = 627 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 8/69 (11%), Positives = 24/69 (34%), Gaps = 4/69 (5%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 + + ++++ L+ +++ A + F R + +LL + Sbjct: 106 VAQSPNDTSAEILFQEGRALLEAGDYANACDKFEASHRL----AHSVGALLNLGDCRERL 161 Query: 108 GKYQQAASL 116 G+ A + Sbjct: 162 GEIASAWAA 170 >gi|255552073|ref|XP_002517081.1| heat shock protein 70 (HSP70)-interacting protein, putative [Ricinus communis] gi|223543716|gb|EEF45244.1| heat shock protein 70 (HSP70)-interacting protein, putative [Ricinus communis] Length = 330 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 36/126 (28%), Gaps = 18/126 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119 +K F K N+ KA + Q + P + ++ K +A + E Sbjct: 22 DKGNEFFKAGNYLKAAALYTQAIKLDPSNPTLYSNRAA-----AFLQLVKLNKALADAEM 76 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 IT P+ + Y+ G + + ++ S V Sbjct: 77 TITLNPQWEKG---YFRKG-CVLEAMERYD-------DASAAFQTALKYNPQSSEVSRKI 125 Query: 180 FYVTVG 185 ++ Sbjct: 126 KRISQL 131 >gi|260823344|ref|XP_002604143.1| hypothetical protein BRAFLDRAFT_208090 [Branchiostoma floridae] gi|229289468|gb|EEN60154.1| hypothetical protein BRAFLDRAFT_208090 [Branchiostoma floridae] Length = 819 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 38/298 (12%), Positives = 93/298 (31%), Gaps = 54/298 (18%) Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVC-FLVGWERQSSRDVYLDSVTDVRYQREV 60 +A+ +++ + K A T +++ FL Q+ + + D + Sbjct: 429 QKDFNQAVETLKSFEKKDSKVASTAATNLSFLYFLENEIGQADKYAEVAMTADRYNPSAL 488 Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 K + +A E++ + R+ + +L G+ + + + Sbjct: 489 VNKGNCVFMQGEHERAREFYQEALRND--STCTE-ALYNLGLTYKKIGRLEDSLDC---F 542 Query: 121 ITQYPESKNVDYVYYLVGMSY-------------AQMIRDVPYD-------------QRA 154 + + +N V Y + Y Q+I VP D + Sbjct: 543 LKLHAILRNSAQVIYQIADLYDLLEDTAQATEWFMQLIGVVPTDAFVLARLGEIYDNEGD 602 Query: 155 TKLMLQYMSRIVERYT--------------NSPYVKGAR---FYVTVGRNQLAAKEVEIG 197 QY + +S + + A V + ++ + Sbjct: 603 KTQAFQYHYESFRYFPSNIEIIEWLGAYYIDSQFCEKAIHYFERAAVIQPSQVKWQLMVA 662 Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + + G Y A+ ++ + + + + E + LV L L EA++ + +++ Sbjct: 663 SCHRRSGNYQQALETYKEIHSKFPE---NVECLRFLVRLCNDLGLK-EAQDYATKLKK 716 >gi|171912904|ref|ZP_02928374.1| hypothetical protein VspiD_17030 [Verrucomicrobium spinosum DSM 4136] Length = 262 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 8/64 (12%), Positives = 20/64 (31%), Gaps = 3/64 (4%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 + + Y A + +F A + + ++R++ + Y G Sbjct: 18 APAQEESAQARYADAKDAFDKGDFQGARKMAEKMLSQ---GQLSREAFQLLGNAHYRLGH 74 Query: 110 YQQA 113 +A Sbjct: 75 LGEA 78 >gi|168704732|ref|ZP_02737009.1| tetratricopeptide repeat protein [Gemmata obscuriglobus UQM 2246] Length = 607 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 15/120 (12%), Positives = 37/120 (30%), Gaps = 14/120 (11%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + E+ E+ + A + + + P + A + + G Sbjct: 22 PEPDTVHELLERGAESFANGKYEDAIRDYTRAIKLDPDSAAAYSAR---GTAHQANGNDA 78 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 A S E + + P + Y G++YA + + + ++ +E + Sbjct: 79 AALSDLTEALKRDPNNATT---RYYRGLAYAHL--------GWPEKAIADLTDFIEMTPD 127 >gi|149376116|ref|ZP_01893881.1| hypothetical protein MDG893_14008 [Marinobacter algicola DG893] gi|149359521|gb|EDM47980.1| hypothetical protein MDG893_14008 [Marinobacter algicola DG893] Length = 437 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 36/101 (35%), Gaps = 7/101 (6%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ V ++ N +A +F + + L V + G + A ++ + Sbjct: 31 FDAGVEAFRQGNLEEARIFFERARAS---GSNSPSLLYNLGVVYFRLGDLKSAETV---F 84 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 +T E+ + YY +G+ +M Q + Q Sbjct: 85 LTL-LETPHAPLAYYNLGLVNQRMGNVGDARQWFERAASQD 124 >gi|119513405|ref|ZP_01632437.1| hypothetical protein N9414_19532 [Nodularia spumigena CCY9414] gi|119461955|gb|EAW42960.1| hypothetical protein N9414_19532 [Nodularia spumigena CCY9414] Length = 172 Score = 36.6 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 37/94 (39%), Gaps = 9/94 (9%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYS 106 S + R Y+ L + + +A E + + + + + + Sbjct: 2 STESLEIARSRYQAGKLNFENGKYREAVENLEKASALLSRN--SRLGGEVEIWLVTAYEA 59 Query: 107 AGKYQQAASLGEEYITQYP---ESKNVDYVYYLV 137 AG+ ++A +L ++ + ++P SK + Y++ Sbjct: 60 AGQTEEAIALCQQ-LQRHPFPETSKQAKDLLYIL 92 >gi|322505686|emb|CAM43285.2| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 622 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 12/80 (15%) Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAE-----HAEEAMARLVEAYVALALMDEAREV 249 IGR ++ EY AA F A Y E E++ L Y L +DEA + Sbjct: 53 NIGRVFIDMKEYGAAENAFTEAAAIYEQVEGDKSLKYAESLELLALCYTHLKFLDEAEKA 112 Query: 250 ----VSLIQ---ERYPQGYW 262 + + + Y W Sbjct: 113 FKDSIRIFRAECYNYGSNSW 132 >gi|294624686|ref|ZP_06703355.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292601017|gb|EFF45085.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 837 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 44/153 (28%), Gaps = 23/153 (15%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102 + D T Y E + A ++F + P +A + Sbjct: 400 NSPALPDVTTSSLDALRAYALGQQRYSEGKYVAALDFFQKAVDIDPHFALAWLGQVR--- 456 Query: 103 VQYSAGKYQQAASL---GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 ++ Y+ A E++ ++ P + Y+ S+ I D Sbjct: 457 AHFANVDYKNATETLRVAEQFKSRLPPRE----ALYVK--SWGVQILDPA-------QAA 503 Query: 160 QYMSRIVERYTNSPYVK-GARFYVT-VGRNQLA 190 ++ E Y + Y A + N+ A Sbjct: 504 DSWIQMAELYPD--YAPAQANAAMDLFVANRFA 534 >gi|255935625|ref|XP_002558839.1| Pc13g04030 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583459|emb|CAP91472.1| Pc13g04030 [Penicillium chrysogenum Wisconsin 54-1255] Length = 808 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 62/198 (31%), Gaps = 54/198 (27%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFP--------FAG--VARKSLLMSAFVQYSAGKYQQA 113 + ++ ++++A +YF++ + P ++ KS + A++ + + Sbjct: 522 GRTYFEQASYTEAAKYFSRVQKLAPSRIEDMEIYSTVLWHLKSDVELAYLAHQLLE---- 577 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + P+ + +G S++ +DQ L+ R Sbjct: 578 ---ADR---LSPQ------AWCAIGNSFSHQ---RDHDQ-----ALKCFKRATMLDPGFA 617 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 Y L E Y+ EY A+ ++ + D H A L Sbjct: 618 YAF-----------TLQGHE------YVANEEYDKALEAYRHGINA--DNRHYN-AWYGL 657 Query: 234 VEAYVALALMDEAREVVS 251 Y + +D A + Sbjct: 658 GTVYDKMGKLDFAEQHFR 675 >gi|194700824|gb|ACF84496.1| unknown [Zea mays] gi|219886829|gb|ACL53789.1| unknown [Zea mays] Length = 361 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 28/86 (32%), Gaps = 12/86 (13%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQA 113 ++ KA + +F A E ++Q P A ++ G Y +A Sbjct: 2 AASDLESKAKEAFVDDDFELATELYSQAIDAGPATADLYADRAQ-----AHIKLGNYTEA 56 Query: 114 ASLGEEYITQYP-ESKNVDYVYYLVG 138 + + I P K YY G Sbjct: 57 VADANKAIELDPMMHK----AYYRKG 78 >gi|154344479|ref|XP_001568181.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 622 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 12/80 (15%) Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAE-----HAEEAMARLVEAYVALALMDEAREV 249 IGR ++ EY AA F A Y E E++ L Y L +DEA + Sbjct: 53 NIGRVFIDMKEYGAAENAFTEAAAIYEQVEGDKSLKYAESLELLALCYTHLKFLDEAEKA 112 Query: 250 ----VSLIQ---ERYPQGYW 262 + + + Y W Sbjct: 113 FKDSIRIFRAECYNYGSNSW 132 >gi|88801585|ref|ZP_01117113.1| aerotolerance-related exported protein [Polaribacter irgensii 23-P] gi|88782243|gb|EAR13420.1| aerotolerance-related exported protein [Polaribacter irgensii 23-P] Length = 252 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 3/74 (4%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++ A F K +F KA E + + V+ + L Y + A Sbjct: 21 DSLFVSANNFYKIGSFEKAIEDYKKIEAQ---NTVSTELYLNLGNTHYKLNQVGPAIYYY 77 Query: 118 EEYITQYPESKNVD 131 E+ + P + + Sbjct: 78 EKALKLDPANNDAA 91 >gi|151946831|gb|ABS19062.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 206 [Homo sapiens] Length = 737 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVGRN------------QLA------------AKEVEIGR 198 ++ + K + + QLA + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|297736093|emb|CBI24131.3| unnamed protein product [Vitis vinifera] Length = 915 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 7/68 (10%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGE 118 + +A L+++ + KA E + Q S+ FP A K + L G+ +++ S+ E Sbjct: 199 FHRASLYVELGEYQKAAESYEQISQLFPENVEAPKTGAKL-----YKKCGQVERSVSILE 253 Query: 119 EYITQYPE 126 +YI +P Sbjct: 254 DYIKDHPT 261 >gi|213619379|ref|ZP_03373205.1| hypothetical protein SentesTyp_24180 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 307 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 A + +GR Y+ RG+Y A+ Q V+ D E E + L Y L E E Sbjct: 214 ARVSIMMGRVYMARGDYAKAVESLQRVIV--QDKELVSETLEMLQTCYQQLGKNAEWAEF 271 Query: 250 VS 251 + Sbjct: 272 LR 273 >gi|254457399|ref|ZP_05070827.1| hypothetical protein CBGD1_1095 [Campylobacterales bacterium GD 1] gi|207086191|gb|EDZ63475.1| hypothetical protein CBGD1_1095 [Campylobacterales bacterium GD 1] Length = 791 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 14/145 (9%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-YQQAASLGEE 119 Y K + E+N+ K E ++ ++P + + L V + + L + Sbjct: 186 YLKIKRYYDEKNYEKCLELIDEVMLEYPSSLFNAELLYYKIRVNSKLEEKNDEVIELSKV 245 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 Y+ +Y NV V L+ +Y+ + + R+ + +SPY K Sbjct: 246 YLREYSADDNVAEVLSLIARAYSLS--------GISGQADYFFDRLFSEHEDSPYAKWGY 297 Query: 180 FYVTVGRNQ--LAAKEVEIGRYYLK 202 Y + LA+K + YYLK Sbjct: 298 IYKGEMLEESGLASKAL---DYYLK 319 >gi|257062034|ref|YP_003139922.1| hypothetical protein Cyan8802_4301 [Cyanothece sp. PCC 8802] gi|256592200|gb|ACV03087.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802] Length = 363 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 75/248 (30%), Gaps = 38/248 (15%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRD 86 + V L + Q + + Y + E + ++++ KA +Y N + Sbjct: 148 IGLGVVLLRQNDYQGAAEAYKRVIALDPNNSEAFAIMGSSLIQQKELDKAIQYLNNAVKR 207 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 FP + + LL +AF+ + A + + P + V I Sbjct: 208 FP-NDLELRLLLATAFL--EQDNNELAFNQLKSAERISPGNPKV-----------QLKIG 253 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 + Q L+ RI +S + + + +Y Sbjct: 254 RILEQQNKLDDALKTYQRITYLSPSSTEARAGVGRIQLA-----------------TKDY 296 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP---QGYWA 263 + A+ ++ + + + L AY EA + + ++ Y Sbjct: 297 LGAVITYRELASMLPETPEPY---YYLGLAYKERGRKKEATKALEQARQLYQKQDNNKGI 353 Query: 264 RYVETLVK 271 V+ L+K Sbjct: 354 EEVDKLLK 361 Score = 36.2 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 35/244 (14%), Positives = 83/244 (34%), Gaps = 52/244 (21%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + + L + + TD +E+ ++ ++++ A + + Sbjct: 10 LVSVFVMGLTLPANAQLQPPLILAQQSTDSEELKELLRLGREYVDLKDYNSAIVTYEKA- 68 Query: 85 RDFPFAGVARKSLLM---------SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 ++L ++ G ++QA ++ +T P + + YY Sbjct: 69 -----------AILDGNNAKIFSGIGYLYAQKGNFRQAVKAYQQAVTLDPNNADF---YY 114 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 +G S A I D A +Q R+ + Y + Sbjct: 115 ALGFSLAN-IGDNENAASAYYYAIQLAPRVTKNY------------------------IG 149 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 +G L++ +Y A ++ V+A + EA A + + + +D+A + ++ + Sbjct: 150 LGVVLLRQNDYQGAAEAYKRVIALDPNNS---EAFAIMGSSLIQQKELDKAIQYLNNAVK 206 Query: 256 RYPQ 259 R+P Sbjct: 207 RFPN 210 >gi|254410083|ref|ZP_05023863.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] gi|196183119|gb|EDX78103.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] Length = 955 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 49/153 (32%), Gaps = 27/153 (17%) Query: 105 YSAGKYQQAASLGEEYITQYP-----ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 Y+ GKY +A L E + Y + ++ Y +G+ Y R + + L Sbjct: 67 YNQGKYNEAIPLAERMLRLYQSVYGEDHLDITYSLNYLGILYRNQGRYTEAEP-LYRQAL 125 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 + R++ P+V + + Y +G Y A P ++ L Sbjct: 126 EMKKRLLGE--EHPHVATSLNNLAYL--------------YESQGRYTEAEPLYRQALEM 169 Query: 220 YSDA-----EHAEEAMARLVEAYVALALMDEAR 247 Y ++ L Y + EA Sbjct: 170 YKRLLGEEHPLVATSLNNLAYLYESQGRYTEAE 202 >gi|124006676|ref|ZP_01691508.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134] gi|123987831|gb|EAY27522.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134] Length = 249 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 10/63 (15%) Query: 59 EVYEKAVLFLKE-QNFSKAYEYFNQ--CSRDF-PFAGVARKSLLMSAFVQYSAGKYQQAA 114 E+++KA ++ N+ KA E + D P+ AF Y+QA Sbjct: 44 ELHQKARQEGQQYGNYDKAIELLKKTCLMADHWPYPVY------DLAFTYLLQKNYEQAL 97 Query: 115 SLG 117 Sbjct: 98 QYY 100 >gi|115741969|ref|XP_796250.2| PREDICTED: similar to Transmembrane and tetratricopeptide repeat containing 3 [Strongylocentrotus purpuratus] gi|115957090|ref|XP_001177605.1| PREDICTED: similar to Transmembrane and tetratricopeptide repeat containing 3 [Strongylocentrotus purpuratus] Length = 778 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 46/114 (40%), Gaps = 11/114 (9%) Query: 55 RYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 +VY A++F+ +++ S A Y+ + P + ++L+ ++ + + + QA Sbjct: 602 PPSVQVYSTLALIFMDDEDTSAALHYYQKALEIQP-SNY--QALVNTSNIHFEEERPLQA 658 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 E + +P + L+G ++D Q Q RIV+ Sbjct: 659 KPYLETLLKHHPNHTEIAKSMLLLGEILLNSLQDEVQSQ-------QLFQRIVD 705 >gi|89890028|ref|ZP_01201539.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7] gi|89518301|gb|EAS20957.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7] Length = 596 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 46/120 (38%), Gaps = 7/120 (5%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + KA L + S+A ++Q ++ + ++LL A + G + A + + Sbjct: 468 KAFAKADLKQYQNQRSEAISLYDQLLQNHKGDPIEDEALLNQAKLYEIEGNLEAAKNNYQ 527 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 I + + D +Y + + Y + D+ RI+ Y +S + A Sbjct: 528 TIIDNFADGILADDAFYKLALLYEEKFNDLS-------KAQALYERIIYDYADSIHFVDA 580 >gi|17563052|ref|NP_503322.1| hypothetical protein R09E12.3 [Caenorhabditis elegans] gi|10864459|gb|AAG24172.1| C. elegans STI-1 protein, confirmed by transcript evidence [Caenorhabditis elegans] Length = 320 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 43/166 (25%), Gaps = 39/166 (23%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPES---------------------------- 127 + Y +++A ++ I P + Sbjct: 7 AEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAV 66 Query: 128 -----KNVDYVYYLVGMSY----AQMIRDVPYDQRATKLMLQYMS--RIVERYTNSPYVK 176 DY MS Q D+ + L +V++ Sbjct: 67 EVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDPELVKKVKELEKQL 126 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 A + +LA +E G Y K+G+Y A+ + + + Sbjct: 127 KAAERLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE 172 >gi|71735889|ref|YP_273576.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556442|gb|AAZ35653.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322923|gb|EFW79013.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv. glycinea str. B076] gi|320329954|gb|EFW85942.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv. glycinea str. race 4] gi|330874706|gb|EGH08855.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas syringae pv. glycinea str. race 4] Length = 252 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 9/63 (14%) Query: 64 AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + LK N +A E+F + R P +SLL A + Y +Y A + + Sbjct: 148 GMTSLKLGNREQAREHFTKALRLDRQLP------RSLLEMAQISYEDKQYVPARDYYDRF 201 Query: 121 ITQ 123 Sbjct: 202 SQL 204 >gi|148264628|ref|YP_001231334.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4] gi|146398128|gb|ABQ26761.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens Rf4] Length = 729 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 69/225 (30%), Gaps = 37/225 (16%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 K + L + + A F + P + + L A + + + Sbjct: 379 KGSIALLKNDGVNAVAEFRTVVAEQPQS---IQGYLRLAEAHALNREMNLMNDTLQNALK 435 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK-GARFY 181 PES +V M+ + + Q+ + + + ++V +Y + Sbjct: 436 VDPESSDV-----QRAMARSYAM------QKDFRKAEEQLRKLVRKYPGDMEARSDLGDV 484 Query: 182 VTVGRNQ-LAAKEVE---------------IGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 R+ A E +G Y+ G++ + L A Sbjct: 485 FVAARDFGRAESEYADLKRKVPQIPLAYVKLGELYMLEGKWARGAAELEKALQINPRATS 544 Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 ++ L++AY+ L D A V+L+ R TL+ Sbjct: 545 F---LSSLMQAYLRLNKGDAA---VALLDARIRSNPKDAVAYTLL 583 >gi|312281917|dbj|BAJ33824.1| unnamed protein product [Thellungiella halophila] Length = 358 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 46/140 (32%), Gaps = 23/140 (16%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAA 114 +E+ EKA + +F A + +++ P A A ++ + A Sbjct: 2 AKELAEKAKEAFLDDDFDVAVDLYSKAIDLDPNCAAFFADRAQ-----ANIKIDNFTDAV 56 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-SP 173 + + I P + Y G + ++ K L+ + + N S Sbjct: 57 ADANKAIDLEPT---LAKAYLRKGTACMKLEEYST-----AKAALEKGASVA---PNESK 105 Query: 174 YVKGARFYVTVGRNQLAAKE 193 + + + ++A +E Sbjct: 106 F----KKMIDECNLRIAEEE 121 >gi|289577920|ref|YP_003476547.1| CRISPR-associated protein, TIGR02710 family [Thermoanaerobacter italicus Ab9] gi|289527633|gb|ADD01985.1| CRISPR-associated protein, TIGR02710 family [Thermoanaerobacter italicus Ab9] Length = 491 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 9/63 (14%), Positives = 25/63 (39%), Gaps = 3/63 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +KA+ + +F+ AY+ F++ + +L + + + +A E + Sbjct: 205 DKAIALFNKGDFASAYKIFSELEERVAYRDYTFYKMLSQIYSCWDNLSFNEAI---EGFE 261 Query: 122 TQY 124 + Sbjct: 262 KLF 264 >gi|253997596|ref|YP_003049660.1| peptidase M48 Ste24p [Methylotenera mobilis JLW8] gi|253984275|gb|ACT49133.1| peptidase M48 Ste24p [Methylotenera mobilis JLW8] Length = 505 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 61/191 (31%), Gaps = 42/191 (21%) Query: 113 AASLGEEYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQ------RAT----KLMLQY 161 A ++ +P S+ + V V + + +RD Q RAT + + Sbjct: 254 AEGNAPSFLRTHPLTSERIADVTNRVEQMHYKQVRDSIEFQYVKAKLRATLGGDQAAIDL 313 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQL-------AAKEVE---------------IGRY 199 + + Y A + + L A KE+ R Sbjct: 314 FEQNIR---EQRYANAAAEHYGLTVALLRKSAWVAADKELAWLQKNAAPHPMIASLAARL 370 Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 + R + AA R+ L ++ D+ + E Y+A + A ++V Q YP Sbjct: 371 EVARDKPAAAAERYASGLRSFPDSRAL---IYGYAEHYLATRQAEPAIQLVKAKQSLYPN 427 Query: 260 GYWARYVETLV 270 Y L+ Sbjct: 428 ---DAYFYDLL 435 >gi|254416281|ref|ZP_05030035.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196176963|gb|EDX71973.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 156 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 55/162 (33%), Gaps = 31/162 (19%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKA----------VLFLKEQNFSKAYEYFNQCSRDFP-F 89 ++ + T+ ++ Y+K + L+ ++A Q R+ P F Sbjct: 14 KNPDENVRKQATEELWRIWFYQKGISGMERLGRTQMLLERGETAQAEALLTQIIREQPDF 73 Query: 90 AG-VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 A R+++L Y +YQ++ ++ I P + +G+ Y + Sbjct: 74 AEAWNRRAVL-----YYILKQYQKSRDDCQQVIRLNPIHFG---ALHGLGLCYMAL---- 121 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190 + + + ++ Y + ++ +L+ Sbjct: 122 ----GDYQAAITAFRKALDIQP---YSLINQKFILECTARLS 156 >gi|253702403|ref|YP_003023592.1| hypothetical protein GM21_3815 [Geobacter sp. M21] gi|251777253|gb|ACT19834.1| TPR repeat-containing protein [Geobacter sp. M21] Length = 399 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 65/203 (32%), Gaps = 22/203 (10%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + F +++++++A + P ++ A + GK +A + + Sbjct: 34 SSGLAFYQKKDYARATSELKRAISMDPTN---TQAYKYLAGAYQAQGKTDEAIKTYKYSL 90 Query: 122 TQYPE----SKNVDYVYYLV---GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 P ++ VY ++ + D T + + Y + Sbjct: 91 ALDPTQASVHTSLGNVYLQQKKYNLAEREFKDAGKLDPTDTLAPY----TLGQLYVQTER 146 Query: 175 VKGARFYVTVGRNQLAAKE----VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230 A +++A + +G Y K G+Y A+ + + E A Sbjct: 147 YGEAEAQFKKV-SRMAPTDPNPYYSLGAVYNKEGKYADAVKQLTQAVKLRPKMEAAH--- 202 Query: 231 ARLVEAYVALALMDEAREVVSLI 253 L AY AL A++ V + Sbjct: 203 FELGVAYAALGDTTNAQKEVDTL 225 >gi|115380067|ref|ZP_01467110.1| soluble lytic murein transglycosylase [Stigmatella aurantiaca DW4/3-1] gi|310822008|ref|YP_003954366.1| transglycosylase slt domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115362926|gb|EAU62118.1| soluble lytic murein transglycosylase [Stigmatella aurantiaca DW4/3-1] gi|309395080|gb|ADO72539.1| Transglycosylase SLT domain protein [Stigmatella aurantiaca DW4/3-1] Length = 783 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 39/127 (30%), Gaps = 13/127 (10%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 KE+ +A + ++ V ++L + + Q S + A S Sbjct: 308 GRALRKERKHRQAIQVLTPVAQQCDSPEVRPQALYVLGYSQ-SVVDPETAISTYATLARD 366 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK--LMLQYMSRIVERYTNSPYVKGARFY 181 YPE D + + +QR + + L + + RY + A F Sbjct: 367 YPEHGYADDALF----------FEAWLEQRTFQPEVALAHYEEVARRYPAGNFASEALFR 416 Query: 182 VTVGRNQ 188 + Sbjct: 417 AFWLHQR 423 >gi|89889366|ref|ZP_01200877.1| hypothetical protein BBFL7_01177 [Flavobacteria bacterium BBFL7] gi|89517639|gb|EAS20295.1| hypothetical protein BBFL7_01177 [Flavobacteria bacterium BBFL7] Length = 379 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 24/61 (39%), Gaps = 3/61 (4%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A ++ + + KA F + R AF YS +Y+++ + Y+ + Sbjct: 190 AQAYMNSKWYDKAIPVFERLFELGNDTEYNRNG---LAFSYYSTRQYEKSIENYKVYVEE 246 Query: 124 Y 124 Y Sbjct: 247 Y 247 >gi|52549471|gb|AAU83320.1| O-linked GlcNAc transferase [uncultured archaeon GZfos27E6] Length = 246 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 25/69 (36%), Gaps = 3/69 (4%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + ++ + +A FN+ R P +A Y +Y++A +E + Sbjct: 167 NEGEGLFVQKKYDEAIRCFNEAIRLNPSYELAWN---NKGTALYMLKRYKEAIKCFDEVL 223 Query: 122 TQYPESKNV 130 P ++ Sbjct: 224 KINPNNETA 232 >gi|148263817|ref|YP_001230523.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4] gi|146397317|gb|ABQ25950.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens Rf4] Length = 207 Score = 36.6 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 22/181 (12%), Positives = 57/181 (31%), Gaps = 21/181 (11%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 + I +F+ + F T+ ++ V + D E + Sbjct: 8 KSVSNCIFVFKGKQMNVRLFLATLIVTLITAIAVHGAVEPKSAPREKGAVDFTGAAEWFR 67 Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSAGKYQQAASLGEEYI 121 K + + ++ +A E F + P A + G +++AA+ ++ + Sbjct: 68 KGLELNRSGSYREAAEAFRKVIAITP----ADAAAWFNLGTASAFLGNHEEAAASLKQAV 123 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P+ + Y +G Y ++ R + ++ +++ + A Sbjct: 124 RLNPD--FLP-AYGNLGGIYYRLGR--------FQEAIEAYGQVLRLKPD-----DANAR 167 Query: 182 V 182 Sbjct: 168 F 168 >gi|312889813|ref|ZP_07749359.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603] gi|311297739|gb|EFQ74862.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603] Length = 286 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 4/78 (5%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +G + +K G++ A+ RF+ ++A + E L E+Y L + EA + Sbjct: 209 LSLGLFAMKSGQFQKAVDRFKTLVAQKPELEPY----FYLAESYKQLGMKAEAIDAYQKC 264 Query: 254 QERYPQGYWARYVETLVK 271 + P + + ++ +K Sbjct: 265 KSMMPDPVFGQRIDEYIK 282 >gi|295400941|ref|ZP_06810916.1| Tetratricopeptide repeat protein [Geobacillus thermoglucosidasius C56-YS93] gi|294976943|gb|EFG52546.1| Tetratricopeptide repeat protein [Geobacillus thermoglucosidasius C56-YS93] Length = 173 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 10/109 (9%) Query: 12 FEAWAYQLYKF-ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70 F + ++ + L+ F I +C G + ++D + RY++ +Y A L+E Sbjct: 9 FRNMSEKMRRLCFLSTFVLIVLCVSYGIFKGKNQDQIYKN----RYEQYIY--AQHLLQE 62 Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Q ++A + R +P L A+ AG + +A+ ++ Sbjct: 63 QKANEALPILKKLYRQYP-DRYNIMRDLGLAYA--LAGDFSKASFYYDK 108 >gi|317050283|ref|YP_004111399.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurispirillum indicum S5] gi|316945367|gb|ADU64843.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurispirillum indicum S5] Length = 474 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 21/53 (39%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 Y ++ L+ +N++ A + P + AF + G+++ A Sbjct: 70 YLAGLVDLRLENYTSAIRNLARSLEIIPEGTNPHNAKYNLAFAYWKNGQHELA 122 >gi|257487200|ref|ZP_05641241.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289649061|ref|ZP_06480404.1| type IV pilus biogenesis protein PilF [Pseudomonas syringae pv. aesculi str. 2250] gi|298486021|ref|ZP_07004095.1| Tfp pilus assembly protein PilF [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159498|gb|EFI00545.1| Tfp pilus assembly protein PilF [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330894492|gb|EGH27153.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas syringae pv. mori str. 301020] gi|331009184|gb|EGH89240.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 252 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 9/63 (14%) Query: 64 AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + LK N +A E+F + R P +SLL A + Y +Y A + + Sbjct: 148 GMTSLKLGNREQAREHFTKALRLDRQLP------RSLLEMAQISYEDKQYVPARDYYDRF 201 Query: 121 ITQ 123 Sbjct: 202 SQL 204 >gi|158334155|ref|YP_001515327.1| TPR domain-containing protein [Acaryochloris marina MBIC11017] gi|158304396|gb|ABW26013.1| TPR domain protein [Acaryochloris marina MBIC11017] Length = 566 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 19/150 (12%), Positives = 42/150 (28%), Gaps = 17/150 (11%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86 + A L E + + + R ++ + + + N+ +A N Sbjct: 255 ALAEAGQALGRGESSKAVSKFNQVLGSDRKAVALHGRGLAHYQRGNYKEALADLNHAIAI 314 Query: 87 FPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE-Y---ITQYPESKNVDYVYYLVGMS 140 P+ + + A Q AS E + + P+ N Y G++ Sbjct: 315 DPYNALFFNSRGSVHLAQALQPNRNLQSGASRAERDFSEALKLNPDDSN---AYNNRGLA 371 Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 M A + ++ + Sbjct: 372 NFYM--------GARTQAIDDYNQALRLDP 393 >gi|153952946|ref|YP_001393711.1| hypothetical protein CKL_0309 [Clostridium kluyveri DSM 555] gi|219853603|ref|YP_002470725.1| hypothetical protein CKR_0260 [Clostridium kluyveri NBRC 12016] gi|146345827|gb|EDK32363.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555] gi|219567327|dbj|BAH05311.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 410 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 15/117 (12%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFA---GVARKSLLMSAFVQYSAGKYQQAASLG 117 Y +LK ++++ A Y + + F + + M +G + A Sbjct: 296 YNLGCNYLKNKDYNNAKTYLKK---SYEFGTGNELYPHIIYMLGTSFDLSGDLKGAIKYY 352 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 EEY + + + V Y + + Y + + Y ++V Y S Y Sbjct: 353 EEYDGSFSDGSYEETVLYRLAVIYKNL---------NMEQSKSYAKKLVNTYPESIY 400 >gi|119509305|ref|ZP_01628455.1| hypothetical protein N9414_15180 [Nodularia spumigena CCY9414] gi|119466147|gb|EAW47034.1| hypothetical protein N9414_15180 [Nodularia spumigena CCY9414] Length = 608 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 61/196 (31%), Gaps = 39/196 (19%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAA 114 + ++ + V ++ A F Q + P+ + + + G+YQQA Sbjct: 148 AKALHNRGVARCNYGDYQGAIADFQQALQWHPYFAPAYSSRGNIYQI-----LGEYQQAI 202 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + + + N+ VY+ G + L ++ Y Sbjct: 203 AEHDRALQL---DPNLAEVYHNRG---------------NARYALGDNQGAIKDY----- 239 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD--AEHAEEAMAR 232 Y + A G Y + ++ AI F L D ++E + R Sbjct: 240 -----NYALKIKPHFAEAYYNRGLVYSRLKDFPQAIADFNQALILNPDDVQAYSERGLIR 294 Query: 233 --LVEAYVALALMDEA 246 L E Y AL +A Sbjct: 295 ETLGEYYQALEDYSQA 310 >gi|91093306|ref|XP_967617.1| PREDICTED: similar to AGAP009119-PA [Tribolium castaneum] gi|270014189|gb|EFA10637.1| hypothetical protein TcasGA2_TC016274 [Tribolium castaneum] Length = 376 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 27/92 (29%), Gaps = 9/92 (9%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLL 98 + +D ++ + +A+ E N+ KA E F + P + A++ Sbjct: 96 GDPNKKVTEEESDKSDEKRM--EAMGQFSEGNYDKAIELFTEAIELNPSSALLFAKRGQ- 152 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 K + P+S Sbjct: 153 ----AFLKQTKPNACIKDCTRALELNPDSAAA 180 >gi|290982719|ref|XP_002674077.1| TPR domain-containing protein [Naegleria gruberi] gi|284087665|gb|EFC41333.1| TPR domain-containing protein [Naegleria gruberi] Length = 724 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 70/199 (35%), Gaps = 42/199 (21%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQ 82 ++ +A C+L+ + +S+ + ++ VY + +++ +E ++ A + +NQ Sbjct: 138 VSALSGLAACYLLLGDIPASKRLIEKALKVNSEYYHVYHVRGMIYDEEGDYENAIKMYNQ 197 Query: 83 CSRDFPFAGVARKSLLMSAFVQY-SAGKY------QQAASLGEEYITQ---Y-PESKNVD 131 S P M A Y A Y +QA E I + +N+ Sbjct: 198 SSFLNP----------MYARSHYNKALSYEKLFLIEQAIDEYRECIRLDSTHISSHQNLS 247 Query: 132 YVYYLVG------------MS------YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 Y Y +G +S I D + + Q ++ + + Sbjct: 248 YCYLQMGEKDRAIKILHEILSKNIDANSMADISDSFREIGDDEKACQVLTSAISLDPTNA 307 Query: 174 --YVKGARFYVTVGRNQLA 190 Y++ A Y + + LA Sbjct: 308 EIYIRRADLYKHMEKKSLA 326 >gi|224535852|ref|ZP_03676391.1| hypothetical protein BACCELL_00716 [Bacteroides cellulosilyticus DSM 14838] gi|224522575|gb|EEF91680.1| hypothetical protein BACCELL_00716 [Bacteroides cellulosilyticus DSM 14838] Length = 317 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 6/99 (6%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 ++++ D+ D + + + + +A + + PF ++ L Sbjct: 179 KEATEDIDAILSQDPDEEAALLLRGKVKEAAGQQEEAETDYRYVTELNPFN---EQAFLC 235 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138 + KY +A +L +E I P N Y+ G Sbjct: 236 LGQLYIVQKKYPEAIALFDEAIELNP---NFAQAYHERG 271 >gi|217979016|ref|YP_002363163.1| peptidase C14 caspase catalytic subunit p20 [Methylocella silvestris BL2] gi|217504392|gb|ACK51801.1| peptidase C14 caspase catalytic subunit p20 [Methylocella silvestris BL2] Length = 1155 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 10/75 (13%) Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA------KEV 194 Y V +++ + VER+ +S Y AR+ + +A KE Sbjct: 261 YLNQTDRVAWEKVKETDDPAALHDFVERFPSSFYAIEARYRLKALERAIAEQKARALKEA 320 Query: 195 EIGRYYLKRGEYVAA 209 E+ R R + VAA Sbjct: 321 ELAR----REKEVAA 331 >gi|197120079|ref|YP_002140506.1| glycosyltransferase [Geobacter bemidjiensis Bem] gi|197089439|gb|ACH40710.1| glycosyltransferase, TPR domain-containing protein [Geobacter bemidjiensis Bem] Length = 616 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 7/93 (7%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 D + Y+++ + + + A++ Q +P A + A + Y G Sbjct: 457 PEEDDLCAEDRYQRSQELVSQGDLDGAFQELKQILSSYP--DFAP-AHNDLAVLAYQQGD 513 Query: 110 YQQAASLGEEYITQYPES----KNVDYVYYLVG 138 +QA + E+ PE+ KN+ Y++ G Sbjct: 514 KEQARAHYEKAAELAPENGTFQKNLADFYFVEG 546 >gi|153821328|ref|ZP_01973995.1| GGDEF family protein [Vibrio cholerae B33] gi|126521146|gb|EAZ78369.1| GGDEF family protein [Vibrio cholerae B33] Length = 667 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100 D+ L + D +Y L + + A +Y N+ + + Sbjct: 215 DLLLCLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 274 Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + G+Y+++ E+ + P + + YV+ +G +Y ++ V DQ Sbjct: 275 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 332 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L+Y++ + + LA + K +Y AI Sbjct: 333 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 374 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A S++ +AY+ LA + EA + Sbjct: 375 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 402 >gi|74004902|ref|XP_852753.1| PREDICTED: similar to F54C1.5a [Canis familiaris] Length = 839 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 7/75 (9%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110 V D + VY L++ +++A + + P + A SLL + Y ++ Sbjct: 183 VPDGEFTAVVY----RLLRDARYAEAVQLLGAELQRSPRSR-AGLSLL--GYCYYRLQEF 235 Query: 111 QQAASLGEEYITQYP 125 AA E+ +P Sbjct: 236 ALAAECYEQLGQLHP 250 >gi|70730204|ref|YP_259943.1| TPR domain-containing protein [Pseudomonas fluorescens Pf-5] gi|68344503|gb|AAY92109.1| TPR domain protein [Pseudomonas fluorescens Pf-5] Length = 785 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 24/78 (30%), Gaps = 3/78 (3%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + + + Y AV A + P R + L +G+ + Sbjct: 710 EPQNPQYAYVLAVALHDSGQQDAANRQLQALLQRQPT---QRNARLSLIQYYLESGQEPK 766 Query: 113 AASLGEEYITQYPESKNV 130 A +L +++ P + Sbjct: 767 AQALMQQWKQLNPGDPAL 784 >gi|113474024|ref|YP_720085.1| glycosyl transferase family protein [Trichodesmium erythraeum IMS101] gi|110165072|gb|ABG49612.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101] Length = 892 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 33/104 (31%), Gaps = 14/104 (13%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + E + +A Y+ + + P + +Q A + I Sbjct: 11 GKNYSDEGKWEEAIFYYKKLTELQP-NNW--EVYQNLGNALLEIESWQDAVTAYRHAIQL 67 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 P N+D+ +Y +G + ++ + + R +E Sbjct: 68 NP---NLDFSHYQLGEALIKL--------EQWQEAIAAYQRALE 100 >gi|291414309|ref|XP_002723403.1| PREDICTED: tetratricopeptide repeat domain 38-like [Oryctolagus cuniculus] Length = 427 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 63/219 (28%), Gaps = 57/219 (26%) Query: 31 AVCFLVGWERQSSRDVYLD----------SVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 A L+G D LD + + +++ AV NF KA + Sbjct: 72 AGLRLIGTGSSRQLDKELDLAVKTMVDVSKAQALTQREQLHVSAVETFANGNFPKACALW 131 Query: 81 NQCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVY 134 Q +D P M A + G Q YP S +V Sbjct: 132 EQILQDHPTD--------MLALKFSHDAYFYLGYQDQMRDSVAR---IYPFWSPDVPLSS 180 Query: 135 YLVGMSYAQMIRDVPYDQ--RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR------ 186 Y+ G+ ++ YD+ + K L + +V R Sbjct: 181 YVKGIYSFGLMETNFYDRAEKLAKEALSIT-------PTDAWSVHTIAHVHEMRAEVQQG 233 Query: 187 --------------NQLAAKEV-EIGRYYLKRGEYVAAI 210 + LA+ + +++G+Y AA+ Sbjct: 234 LEFMQHSETHWKDSDMLASHNYWHWALFLIEKGDYEAAL 272 >gi|262194272|ref|YP_003265481.1| hypothetical protein Hoch_0987 [Haliangium ochraceum DSM 14365] gi|262077619|gb|ACY13588.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM 14365] Length = 305 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 32/98 (32%), Gaps = 6/98 (6%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK-AYEYFNQCSRDFP 88 + FLV + L D R+ + A + ++++ A EY + Sbjct: 3 LRAAFLVLCFLALNSSPILAQAQDKELARKHFVLAQAHEQNGDYAQAAVEYLEA----YE 58 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 + + + + G+ +A E Y+ P Sbjct: 59 YFA-SPEFFYNAGRAYELGGEAAKAVEHYERYMALDPN 95 >gi|195055231|ref|XP_001994523.1| GH17296 [Drosophila grimshawi] gi|193892286|gb|EDV91152.1| GH17296 [Drosophila grimshawi] Length = 948 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 8/100 (8%) Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEI-----GRYYLKRGEYVAAIPRFQLVLANYS 221 E + S + + Y + KE+ + YLK +Y A+ L Sbjct: 24 EAFKASKWTDAVQEYTAAIKLGAKHKELPVFYKNRAAAYLKLDKYTEAVDDCTESLRF-- 81 Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 A + +A+ R +AY ALA +EA + + + + P Sbjct: 82 -APNDPKALFRRAQAYEALAKPEEAYKDATALFKADPGNK 120 >gi|169849933|ref|XP_001831665.1| hypothetical protein CC1G_05736 [Coprinopsis cinerea okayama7#130] gi|116507303|gb|EAU90198.1| hypothetical protein CC1G_05736 [Coprinopsis cinerea okayama7#130] Length = 267 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 10/72 (13%) Query: 62 EKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 E+ L+E + A + + + R+ SL Y +Y+QA + + Sbjct: 102 EQGTAKLEEGDVQAARDLYKRSVEIKRN-------ASSLFNLGVTYYHLKEYEQAIAAWK 154 Query: 119 EYITQYPESKNV 130 E I P S + Sbjct: 155 ESIALQPSSPDA 166 >gi|90420401|ref|ZP_01228308.1| glutathione S-transferase [Aurantimonas manganoxydans SI85-9A1] gi|90335129|gb|EAS48882.1| glutathione S-transferase [Aurantimonas manganoxydans SI85-9A1] Length = 225 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 16/107 (14%) Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY--LKRGEYVAAIPRFQLV-----LANYS 221 Y + Y++ A+ + V + LA +E +G Y + + I R ++V LANY Sbjct: 120 YAANRYLREAQRHYQVLDDHLAGREFFVGDDYSIVDMAAWGW-IDRAKMVLGEGELANYP 178 Query: 222 DAE---HAEEAMARLVEAYV---ALALMDEAREVV--SLIQERYPQG 260 + A +A + EA + E E +L + YP G Sbjct: 179 NLSRWFAAIDARPAVAEARKVGSDVGFKSERDEAALRALFPQNYPAG 225 >gi|16331646|ref|NP_442374.1| hypothetical protein sll0886 [Synechocystis sp. PCC 6803] gi|1001204|dbj|BAA10444.1| sll0886 [Synechocystis sp. PCC 6803] Length = 279 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 65/240 (27%), Gaps = 65/240 (27%) Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV------YEKAVLFLKEQN 72 L K+ + S+ LVG V+ ++ +KA + + Sbjct: 5 LRKYFALLMPSLWGIVLVGLLLFFPSPVWATESPIPLTDEQLEVGDSLTDKAFAATEAGD 64 Query: 73 FSKAYEYFNQCSRDFPFAG--VAR-------KSLLMSAFVQYSA---------------- 107 F A +Y+ + FP + ++ L A ++ Sbjct: 65 FVTAEKYWTELIEKFPQNPAVWSNRGNSRVSQNKLDEAIADFNQAIELAPEQTDPYLNRG 124 Query: 108 ------GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161 G+++ A + + PE + Y G + + L+ Sbjct: 125 TALEAKGEFKAAIADYNRVLAVNPED---AFAYNNRGNAEGGL--------GNWTSALED 173 Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221 + N + + LA E+ G+ AI + ++ Y Sbjct: 174 FQQATAIAPNFAFAQ--------ANTALALYEL---------GQKTEAIQTMRRLVKKYP 216 >gi|116208118|ref|XP_001229868.1| hypothetical protein CHGG_03352 [Chaetomium globosum CBS 148.51] gi|88183949|gb|EAQ91417.1| hypothetical protein CHGG_03352 [Chaetomium globosum CBS 148.51] Length = 796 Score = 36.6 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 58/198 (29%), Gaps = 50/198 (25%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE-SKNVDY 132 +A F+ R L A Y Y A + T P ++++ Sbjct: 498 QEALAAFSSLPRSHQDTPW---VLARVAKAHYELANYADAERIFRRLRTLAPTRHEDME- 553 Query: 133 VYY-------LVG--MSY-AQMIRDVPYDQRAT--------------KLMLQYMSRIVER 168 +Y G +S+ A + D+ +D + LQ R + Sbjct: 554 -FYSTVLWQLRKGTELSFLAHELTDMDWDSPQAWCVMGNAFSLDCDHEQALQCFKRAIHL 612 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 N Y L E + + EY A+ ++ +A D H Sbjct: 613 QPNFSYAY-----------TLQGHE-HV-----ENEEYDKALVSYRRAVAA--DKRHYN- 652 Query: 229 AMARLVEAYVALALMDEA 246 A + + Y L D+A Sbjct: 653 AYYGIGKVYEKLGNYDKA 670 >gi|284036905|ref|YP_003386835.1| hypothetical protein Slin_1991 [Spirosoma linguale DSM 74] gi|283816198|gb|ADB38036.1| Tetratricopeptide TPR_2 repeat protein [Spirosoma linguale DSM 74] Length = 367 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 25/208 (12%), Positives = 64/208 (30%), Gaps = 27/208 (12%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + + +A + L+ + + + + ++ + + V GK + Sbjct: 116 DPDFGTAYFNRAEVLLETGDAAGSVSDLMRINKQYQDSTF---YQTRLGDVYVRLGKQAE 172 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A + + + P++ ++ + Y Q+A + + R + Sbjct: 173 AQAAYDRALQLNPDNVE--------ALTNRGALL---YSQKAYDQAGEDIQRALRLNPKQ 221 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGR---------YYLKRGEY-VAAIPRFQLVLANYSD 222 + + A V + R YYL Y + + R L + Sbjct: 222 DAALNNQSLLLARVGNFAEALVYVERALALQPRQPYYLNNKAYLLLKLNRASEALPVVQE 281 Query: 223 AEHAEEAMARLVEAYVALALMDEAREVV 250 + ++ R A+ L L +++ Sbjct: 282 SLQRDD---RNAWAHQTLGLYYLSQKQA 306 >gi|326201126|ref|ZP_08190998.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium papyrosolvens DSM 2782] gi|325988694|gb|EGD49518.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium papyrosolvens DSM 2782] Length = 292 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 19/120 (15%) Query: 61 YEKAVLFL-----KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 Y KA FL + +A EY+ + + P+ A A V GKY +A Sbjct: 96 YTKAYFFLANSCDEGGRKEEAAEYYEKAAELEPYHFWAYN---NLAAVYEEMGKYDKALI 152 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + + P + G+ ++ T+ ++Y + +E+ PY Sbjct: 153 AIRKGLRLEPNHFK---ALFNAGVIMNRL--------GYTQKAVEYYNTSIEKNPRYPYS 201 >gi|125598900|gb|EAZ38476.1| hypothetical protein OsJ_22864 [Oryza sativa Japonica Group] Length = 955 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 39/116 (33%), Gaps = 25/116 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSR---DFP------FAGVARKSLLMSAFVQYSAGKYQQ 112 ++ + E + +A F+Q R +P A + L SA + + Sbjct: 240 SNSMASVNEGRYDQAISIFDQILRETPTYPEALIGRGTAYAFQRELDSAIS-----DFTK 294 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 A + + P S ++ + G+ + + ++ +S V+R Sbjct: 295 AVEDLTKALEFEPNSPDI---LHERGIVNFKF--------KDYNAAVEDLSTCVKR 339 >gi|145516108|ref|XP_001443948.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124411348|emb|CAK76551.1| unnamed protein product [Paramecium tetraurelia] Length = 572 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 14/129 (10%), Positives = 36/129 (27%), Gaps = 21/129 (16%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQ 104 S ++ E+ + + KA +++ + P + +S Sbjct: 3 PKSRRSEPNPNQLKEEGNTAFLNRQYPKAINLYSKALQLEEN-PIS-YNNRSQ-----AY 55 Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 G+ + A + + P Y+ + V Y+ + ++ + Sbjct: 56 LQTGELELALQDCNKALQLNPS--------YVKATTNKAQ---VLYEMGYLQQAIECLQS 104 Query: 165 IVERYTNSP 173 I S Sbjct: 105 INNHTPESE 113 >gi|123411998|ref|XP_001303975.1| TPR Domain containing protein [Trichomonas vaginalis G3] gi|121885395|gb|EAX91045.1| TPR Domain containing protein [Trichomonas vaginalis G3] Length = 908 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 22/53 (41%), Gaps = 6/53 (11%) Query: 64 AVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + + + + ++ E+F + F +K+ L F+ G Y +A S Sbjct: 708 GHVEFERKRYQESAEWFEEGLELQFE-----QKAALRLGFIYLKLGDYLKAES 755 >gi|134045937|ref|YP_001097423.1| hypothetical protein MmarC5_0901 [Methanococcus maripaludis C5] gi|132663562|gb|ABO35208.1| TPR repeat-containing protein [Methanococcus maripaludis C5] Length = 409 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 30/73 (41%), Gaps = 10/73 (13%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESK 128 N+ ++ E F++ L+ ++ Y +Y++A ++ + ++ Sbjct: 140 GNYDESIESFDK-----STGNYEEIVLIWNELGYIYYQNEEYEKALECFDKALLL---NR 191 Query: 129 NVDYVYYLVGMSY 141 N+ Y + G+ Y Sbjct: 192 NLKYSFNGKGLCY 204 >gi|86143796|ref|ZP_01062172.1| hypothetical protein MED217_00845 [Leeuwenhoekiella blandensis MED217] gi|85829839|gb|EAQ48301.1| hypothetical protein MED217_00845 [Leeuwenhoekiella blandensis MED217] Length = 524 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 41/125 (32%), Gaps = 11/125 (8%) Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL--AAKEV 194 +++ Q + D + + + I Y + A Y + A E Sbjct: 151 KALTFQQRSLQIYRDLKDVQGEAAVLENIGSIYEDLEDYDKAYSYFEKAFSYFKNAGNEA 210 Query: 195 EI------GRYYLKRGEYVAAIPRFQLVL---ANYSDAEHAEEAMARLVEAYVALALMDE 245 ++ Y K+G Y AI + Q L Y +A E A L +AY ++ Sbjct: 211 QVNALNNLADVYRKKGNYAQAIAKTQEALALAETYKNAHQVESAYKDLAKAYALSQDFEQ 270 Query: 246 AREVV 250 A Sbjct: 271 AHHYA 275 >gi|119358297|ref|YP_912941.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119355646|gb|ABL66517.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides DSM 266] Length = 243 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 6/76 (7%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A L + ++ A +F + P + A S + +G Y A I Sbjct: 33 QAEEQLDKGDYKSAITFFTKAIELDPQSIEAYNSR---GSAKAKSGDYPDAIEDFSIAIE 89 Query: 123 QYPESKNVDYVYYLVG 138 N YY Sbjct: 90 L---DPNAAEAYYNRA 102 >gi|308270719|emb|CBX27329.1| hypothetical protein N47_H21510 [uncultured Desulfobacterium sp.] Length = 448 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%) Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 IG +YLK G + AI F+ L A L AY+ + ++A EV Sbjct: 49 IGVWYLKTGRFDKAISEFETALTKNPGEPF---ATYYLGLAYLGMENFEKAIEV 99 >gi|307181746|gb|EFN69207.1| WD and tetratricopeptide repeats protein 1 [Camponotus floridanus] Length = 667 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 15/122 (12%), Positives = 41/122 (33%), Gaps = 21/122 (17%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYS---AGK 109 Y E+ +A ++Q +S A +N+ P+A A ++ G Sbjct: 360 PYVEELKRQANERFEQQKYSLAINLYNKAISYCPWAAVLFANRAA-----AYMKRAWDGD 414 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 A + T + +S+++ ++ + + R + + + +++ Sbjct: 415 IYAALRDCQ--TTLFLDSEHIK-AHFRLARCLFDLNRSI--------EAEKVLKNFQQKF 463 Query: 170 TN 171 Sbjct: 464 PE 465 >gi|297183434|gb|ADI19566.1| FOG: tpr repeat-protein [uncultured Acidobacteria bacterium HF0770_27F21] Length = 333 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 47/144 (32%), Gaps = 30/144 (20%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-------CSRDFPFAGVARKSLLMS 100 ++ V + +E++E+A+ +++ A + + Sbjct: 129 VEGVGNAAVNQEMFEEAIALSDAGDYAGAVAKYEEFMVANPHLDAVH----------GNI 178 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 AG ++A E+ + P++ M+ M ++ + + L Sbjct: 179 GNAYRDAGDVEKAREAYEKLLAAEPDNV----------MANYNM-GEMFVEAGDMEEALP 227 Query: 161 YMSRIVERYTNSP--YVKGARFYV 182 Y ++++ + P Y A Y Sbjct: 228 YFESVLQQNPDDPAVYYNVAELYF 251 >gi|291326359|ref|ZP_06124222.2| methyl-accepting chemotaxis protein II [Providencia rettgeri DSM 1131] gi|291314720|gb|EFE55173.1| methyl-accepting chemotaxis protein II [Providencia rettgeri DSM 1131] Length = 561 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 8/74 (10%), Positives = 25/74 (33%), Gaps = 10/74 (13%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--------A 90 + ++ D+ + + + + Y + ++ ++ KA F + + + Sbjct: 83 DDATTEDLIKAAKRNFKSADDAYARYNKLMQSSDYDKA--KFEKLFSTYETYRDALIKLS 140 Query: 91 GVARKSLLMSAFVQ 104 A K L + Sbjct: 141 EFAEKGDLEGFYAH 154 >gi|257468137|ref|ZP_05632233.1| hypothetical protein FulcA4_02297 [Fusobacterium ulcerans ATCC 49185] Length = 470 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 12/133 (9%), Positives = 42/133 (31%), Gaps = 24/133 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQA 113 + ++ +A +F + ++++ + + Q+A Sbjct: 354 NDGESSFNKGSYVEALVHFEKALEINKNY--------AETKDIYFYMGQSNLQLDNGQKA 405 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 ++ + +YY +G++Y ++ + Y + + ++Y S Sbjct: 406 IENYKKALDLEKSDDKKAEIYYNMGIAYDKL--------GNKEESRNYFTFVRQKYPKSS 457 Query: 174 YVKGARFYVTVGR 186 + + Y+ Sbjct: 458 WSTKSSIYLLKLN 470 >gi|322419153|ref|YP_004198376.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter sp. M18] gi|320125540|gb|ADW13100.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter sp. M18] Length = 881 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 80/243 (32%), Gaps = 38/243 (15%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY---EKAVLFLKEQNF 73 YQ+ K ++ +A+ ++ + + + R + K L + ++N+ Sbjct: 554 YQMAKQTRSVEAYLALAAYHQKKKSPEKALEVLDEAVKLDARNLVPLEAKGRLLMAQKNY 613 Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 +A + F++ S P R +LL + + +A I +P S Sbjct: 614 KQALKVFDEVSALNP----DRGALLKVG-CYLAMKQGDKAVEQARRLIASHPSS------ 662 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 + G ++ + T + ++ + S R L Sbjct: 663 --VKG---YLLLASIFQGGGDTTSAIAQANQAIRVDGKS----------VEARVLL---- 703 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 G Y R + AA+ FQ L D+ A A+A L+E + A S++ Sbjct: 704 ---GGLYRARKDNAAAMSAFQDALKVQPDSVPARFAVATLLEGTGK--KQEAAARYRSIL 758 Query: 254 QER 256 Sbjct: 759 DLN 761 >gi|254459050|ref|ZP_05072473.1| von Willebrand factor, type A [Campylobacterales bacterium GD 1] gi|207084321|gb|EDZ61610.1| von Willebrand factor, type A [Campylobacterales bacterium GD 1] Length = 615 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 9/58 (15%), Positives = 23/58 (39%), Gaps = 4/58 (6%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +A K +++ K+ + + + + + +S + Y KY++A E Sbjct: 351 SEAKDAYKAEDYVKSAKLYEK----YAQSSKKGESFFNAGNSLYKQKKYKEAVEAYER 404 >gi|253701871|ref|YP_003023060.1| polar amino acid ABC transporter inner membrane protein [Geobacter sp. M21] gi|251776721|gb|ACT19302.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter sp. M21] Length = 339 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 10/78 (12%), Positives = 26/78 (33%), Gaps = 9/78 (11%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCS-----RDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 +++ A + + A + F +S + A +Q++ Sbjct: 33 DQIFSDANDAMGSGDLPAAIAILQKVEPDKGDDSGAF----VRSRMQIARLQFALKDMNA 88 Query: 113 AASLGEEYITQYPESKNV 130 A++ E + YP++ Sbjct: 89 ASASANEVLALYPDNSEA 106 >gi|218248948|ref|YP_002374319.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 8801] gi|218169426|gb|ACK68163.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801] Length = 363 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 75/248 (30%), Gaps = 38/248 (15%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRD 86 + V L + Q + + Y + E + ++++ KA +Y N + Sbjct: 148 IGLGVVLLRQNDYQGAAEAYKRVIALDPNNSEAFAIMGSSLIQQKELDKAIQYLNNAVKR 207 Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 FP + + LL +AF+ + A + + P + V I Sbjct: 208 FP-NDLELRLLLATAFL--EQDNNELAFNQLKSAERISPGNPKV-----------QLKIG 253 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206 + Q L+ RI +S + + + +Y Sbjct: 254 RILEQQNKLDDALKTYQRITYLSPSSTEARAGVGRIQLA-----------------TKDY 296 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP---QGYWA 263 + A+ ++ + + + L AY EA + + ++ Y Sbjct: 297 LGAVITYRELASMLPETPEPY---YYLGLAYKERGRKKEATKALEQARQLYQKQDNNKGI 353 Query: 264 RYVETLVK 271 V+ L+K Sbjct: 354 EEVDKLLK 361 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 35/244 (14%), Positives = 83/244 (34%), Gaps = 52/244 (21%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + + L + + TD +E+ ++ ++++ A + + Sbjct: 10 LVSLFVMGLTLPANAQLQPLLILAQQSTDSEELKELLRLGREYVDLKDYNSAIVTYEKA- 68 Query: 85 RDFPFAGVARKSLLM---------SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 ++L ++ G ++QA ++ +T P + + YY Sbjct: 69 -----------AILDGNNAKIFSGIGYLYAQKGNFRQAVKAYQQAVTLDPNNADF---YY 114 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 +G S A I D A +Q R+ + Y + Sbjct: 115 ALGFSLAN-IGDNENAASAYYYAIQLAPRVTKNY------------------------IG 149 Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 +G L++ +Y A ++ V+A + EA A + + + +D+A + ++ + Sbjct: 150 LGVVLLRQNDYQGAAEAYKRVIALDPNNS---EAFAIMGSSLIQQKELDKAIQYLNNAVK 206 Query: 256 RYPQ 259 R+P Sbjct: 207 RFPN 210 >gi|162450831|ref|YP_001613198.1| hypothetical protein sce2559 [Sorangium cellulosum 'So ce 56'] gi|161161413|emb|CAN92718.1| hypothetical protein predicted by Glimmer/Critica [Sorangium cellulosum 'So ce 56'] Length = 279 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 39/105 (37%), Gaps = 3/105 (2%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 IF + + + + D+ + ++ A F + ++ +A +Y+ Sbjct: 15 IFLAAGLALAGDPAIEYPECYRTATPADLEGAKGAHKAATQFYERADYDRAIQYW---KD 71 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + A L+ A G+ +A + E Y+ + P++ + Sbjct: 72 AYQLDCSAHGVLINIANAYEKKGERAEAVTALETYLARTPDASDA 116 >gi|225432356|ref|XP_002275310.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297736897|emb|CBI26098.3| unnamed protein product [Vitis vinifera] Length = 560 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 74/211 (35%), Gaps = 20/211 (9%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + Y +A + ++ E F + + FP LL A V+ GK +A Sbjct: 216 QRYVEAQCCIASNDYKGGLELFTELLQRFPNNIH---ILLEIAKVEAIIGKNDEAIMN-- 270 Query: 119 EYITQYPESKNV-----DYVYYLVGMSYAQMIRDVPYDQ---RATK-LMLQYMSRIVERY 169 + ++ +Y L+ S + + +D T+ + +S + ER Sbjct: 271 -FEKARSIDPHIITYMDEYAMLLMIKSDHLKLNKLVHDLLSIDPTRPEVFVALSVVWERK 329 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 + A + + + ++ G YL AA+ F+ D + Sbjct: 330 EERGALSYAEKSIRIDERHIPGYIMK-GNLYLSMNRPDAAVVAFRGAQELKPDLRSYQG- 387 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260 LV +Y+AL+ + EA V + PQ Sbjct: 388 ---LVRSYLALSKIKEALYVAREAMKAMPQS 415 >gi|152990153|ref|YP_001355875.1| von Willebrand factor type A domain-containing protein [Nitratiruptor sp. SB155-2] gi|151422014|dbj|BAF69518.1| von Willebrand factor type A domain protein [Nitratiruptor sp. SB155-2] Length = 549 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 15/135 (11%), Positives = 42/135 (31%), Gaps = 34/135 (25%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 ++ ++A + A + F + + + +S + Y A KY++A Sbjct: 338 KLIKQAKEAYDRGAYEVAAQKFKEIAEV----KGSAQSYFDAGNALYKAKKYKEAFQYYA 393 Query: 119 ---------EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI--VE 167 E+ + N+ G Y Q+ + + ++ + ++ Sbjct: 394 KVQTEDKELEFRKLH----NM-------GNCYFQL--------QNYQKAIEMYEKALKLK 434 Query: 168 RYTNSPYVKGARFYV 182 ++ Y + Sbjct: 435 NDPDTKYNLELAKKM 449 >gi|116326912|ref|YP_796632.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332423|ref|YP_802141.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116119656|gb|ABJ77699.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116126112|gb|ABJ77383.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 500 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 73/219 (33%), Gaps = 49/219 (22%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL----LMSAFVQYSAGKYQQAAS 115 +Y+ V ++ + +S+A E ++ K L L A + Y++A Sbjct: 213 LYKYGVTLIRLEKYSEALEVLDKLEDK--IGMNNPKMLYYTNLNQAVAYHKMKHYEEAIK 270 Query: 116 LGEEYITQYPESKNVDYVYY-----LVGMSYAQM-IRDVPYDQRATKLMLQYMSRI--VE 167 ++ Y L+G++ + I+D + + L++ R + Sbjct: 271 YYKK-----------SYAVNGTIQPLIGLTKLKYEIKDCENSIKTAEKALEFGERTHEIR 319 Query: 168 RY-----TNSPYVKGARFYVTVGRNQLAAKE---------------VEIGRYYLKRGEYV 207 Y + + ++L KE +++ RYY GEY Sbjct: 320 MYLALCKIQNKEENEGYVILKEIASKL-EKENPEFKNLPDVYNDGILKLARYYTNHGEYT 378 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 A+ F V + + L +AY +D+A Sbjct: 379 KALRYFHSVQVSEEEEREYR---FYLGKAYYYTGKVDQA 414 >gi|71361631|ref|NP_001025089.1| tetratricopeptide repeat protein 30A2 [Rattus norvegicus] gi|81918137|sp|Q4QQS2|T30A2_RAT RecName: Full=Tetratricopeptide repeat protein 30A2; Short=TPR repeat protein 30A2 gi|67678066|gb|AAH98051.1| Tetratricopeptide repeat domain 30A1 [Rattus norvegicus] gi|149022322|gb|EDL79216.1| rCG26277 [Rattus norvegicus] Length = 664 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125 +++ +S+A + + + P + A SLL A+ Y +++ AA E+ +P Sbjct: 20 RLIRDSRYSEAVQLLSAELQRSPRSR-AGLSLL--AYCYYRLQEFELAAECYEQLSQMHP 76 >gi|298675150|ref|YP_003726900.1| TPR repeat-containing protein [Methanohalobium evestigatum Z-7303] gi|298288138|gb|ADI74104.1| TPR repeat-containing protein [Methanohalobium evestigatum Z-7303] Length = 240 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 8/108 (7%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94 L+G ++ L +R + KA + + + A E F + + + Sbjct: 75 LLGRPDEADEIAELIIELGTMNRRFLMFKAEVLSSKGRYEDAVELFEEAEKRD--SP--D 130 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 + L A G+ +QA + + + + + VYY+ YA Sbjct: 131 DAPLAKAVHHIRYGEPEQAIEVCNDLLKWHQCHE----VYYVRAYVYA 174 >gi|256830934|ref|YP_003159662.1| peptidase M48 Ste24p [Desulfomicrobium baculatum DSM 4028] gi|256580110|gb|ACU91246.1| peptidase M48 Ste24p [Desulfomicrobium baculatum DSM 4028] Length = 445 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 36/114 (31%), Gaps = 14/114 (12%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 ++N A +Y + R +P ++ M Y A + Y P + + Sbjct: 341 QKNGKGAADYAARAKRVYPTEA---QAQHMHGVASILNKDYAAALADFSAYERILPGNPS 397 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 ++ G SY M + + Q R ++ T + A + Sbjct: 398 T---VFMKGFSYEGM--------KNKQNAAQEYHRYLKVVTQGEMAQHAYSRLK 440 >gi|218133792|ref|ZP_03462596.1| hypothetical protein BACPEC_01681 [Bacteroides pectinophilus ATCC 43243] gi|217991167|gb|EEC57173.1| hypothetical protein BACPEC_01681 [Bacteroides pectinophilus ATCC 43243] Length = 464 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 11/86 (12%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 L + + YS G+Y QA +S D YY Y V DQ T+ Sbjct: 387 LYNTGYSNYSRGRYDQAVEDLTVAYKL--DSTKADAAYY-SAKCY------VALDQ--TE 435 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYV 182 +Y IV + S Y+ A YV Sbjct: 436 NAKKYYQYIVTNFPTSRYISEATTYV 461 >gi|154335407|ref|XP_001563942.1| serine/threonine protein phosphatase type 5 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 468 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 18/139 (12%), Positives = 43/139 (30%), Gaps = 25/139 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ ++ +E+ F A + ++ L AF A + +E Sbjct: 9 QEGNVYFQEKKFQHAVDSYSLAIEA-----HKTPTLLCNRAFAYLKLELPGAALADAQEA 63 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I P +Y ++ + K + + +++ S K A+ Sbjct: 64 IEIDPGFVK---AHYRKASAHLLL--------GKFKDAQREFAAVLKLVP-SE--KDAQR 109 Query: 181 YVTVGRNQLAAKEVEIGRY 199 + KE++ R+ Sbjct: 110 KYDLC-----EKELKRIRF 123 >gi|30249415|ref|NP_841485.1| TPR repeat-containing protein [Nitrosomonas europaea ATCC 19718] gi|30138778|emb|CAD85355.1| TPR repeat [Nitrosomonas europaea ATCC 19718] Length = 929 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 35/190 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--RKSLLMSAFVQYSAGKYQQAASLGEE 119 +A + + + F A + + P + +A ++LL +S GK+ A + Sbjct: 244 NRATISISTKKFEAAQADLDAVRKIAPGSLLAAYTQALLD-----FSQGKHAVALETLQR 298 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 ++ P + V L G + + + QY+ + ++ N+ Y Sbjct: 299 ILSSAPGH--LPSVL-LAGATQFAL--------GSFPQAGQYVEQYLKAIPNNLYAIKLM 347 Query: 180 FYVTVGRNQL---------AAKEVE--------IGRYYLKRGEYVAAIPRFQLVLANYSD 222 + + NQ+ A K V+ G Y++ ++ A F+ D Sbjct: 348 ASIQLKNNQVKQAITTLTPALKSVQQDPQLFALAGEAYMRSKDFTKASEYFEKAGELAPD 407 Query: 223 AEHAEEAMAR 232 A+A Sbjct: 408 NASLYTALAM 417 >gi|86137861|ref|ZP_01056437.1| TPR domain protein [Roseobacter sp. MED193] gi|85825453|gb|EAQ45652.1| TPR domain protein [Roseobacter sp. MED193] Length = 189 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 43/135 (31%), Gaps = 17/135 (12%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + +A + + A E+ + P A + A V ++ G Y + + E Sbjct: 72 LLSRATKAMMAGDLPVALEHLTALTDHAP--DFA-RGWYERARVFHALGAYGPSVADLER 128 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P + Y G + + RD + R + + V A Sbjct: 129 ALALNPNDYDAIYAL---G-TVFEQFRDPKR-------AYEVYLRAKAIHPHHEEVLSAL 177 Query: 180 FYVTVGRNQLAAKEV 194 R ++A K++ Sbjct: 178 ER---LRPEVAGKDL 189 >gi|46116562|ref|XP_384299.1| hypothetical protein FG04123.1 [Gibberella zeae PH-1] Length = 509 Score = 36.6 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 13/102 (12%), Positives = 30/102 (29%), Gaps = 18/102 (17%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A+ F +A F + K L + + G++++A + I Sbjct: 12 AALGRYDNNEFEEALNEFGKIGD-------TSKILFNMGVIHATLGEHEKAVESYQRAIR 64 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + + Y+ G+S + + L + Sbjct: 65 L---DQYLAVAYFQQGVSNFLL--------GDFEEALANFND 95 >gi|295707125|ref|YP_003600200.1| hypothetical protein BMD_5051 [Bacillus megaterium DSM 319] gi|294804784|gb|ADF41850.1| conserved hypothetical protein [Bacillus megaterium DSM 319] Length = 500 Score = 36.6 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 7/71 (9%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 E+A L+ NF +A + + ++P ++ A + K +A L E Sbjct: 160 EQAKRLLEATNFEEAVDLLTEIIDEYPEFWSAYN-----NLALAYFYLNKIDEAMDLLNE 214 Query: 120 YITQYPESKNV 130 + + P + + Sbjct: 215 VLEKNPGNLHA 225 >gi|281340093|gb|EFB15677.1| hypothetical protein PANDA_004445 [Ailuropoda melanoleuca] Length = 859 Score = 36.6 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 30/133 (22%) Query: 45 DVYLDSVTDVRYQ---REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG----VARKSL 97 D VT + RE Y + + L+++++ A +F++ + A ++ Sbjct: 40 DDVKPKVTGLTVPLKVREYYHQGLQCLEKEDWEMAVLFFSR--ALHLDSQLVDFYALRAE 97 Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------VYYLVGMSYAQMIRDVPYD 151 + AA + P +N Y V YL G + + Sbjct: 98 -----AYIQLCDFSSAAQNLRRAYSFQP--ENTKYLERLTLVLYLQGQCLFEQL------ 144 Query: 152 QRATKLMLQYMSR 164 A + L+ + Sbjct: 145 --AFREALKVFLQ 155 >gi|149202967|ref|ZP_01879938.1| TPR domain protein [Roseovarius sp. TM1035] gi|149143513|gb|EDM31549.1| TPR domain protein [Roseovarius sp. TM1035] Length = 595 Score = 36.6 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 36/107 (33%), Gaps = 14/107 (13%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 + A E Q ++D+P +A + + S + A + + Y +S+ Sbjct: 362 RAGKPDAAIEVLEQLAKDYP--NLAE-VHVAVGDLHRSQEDFSAAVPAYDRALELY-QSR 417 Query: 129 NVD--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 D +V Y +S+ ++ R +E + P Sbjct: 418 GNDQWFVRYARAISHERLDNWP--------EAEADFRRALELNPDHP 456 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 19/124 (15%) Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 + +A E + D F AR A + +A + + P+ V Sbjct: 407 YDRALELYQSRGNDQWFVRYAR------AISHERLDNWPEAEADFRRALELNPDHPQV-- 458 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192 L + Y + + + D L + R V +S Y+ + +V +L Sbjct: 459 ---LNYLGYTMVEKHINLD-----EALNMIERAVAAQPDSGYIVDSLGWVLY---RLGRY 507 Query: 193 EVEI 196 E I Sbjct: 508 EEAI 511 >gi|50423773|ref|XP_460471.1| DEHA2F02464p [Debaryomyces hansenii CBS767] gi|49656140|emb|CAG88778.1| DEHA2F02464p [Debaryomyces hansenii] Length = 708 Score = 36.6 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 39/141 (27%), Gaps = 28/141 (19%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109 D Y + + +F+ AYE F Q P + Y + Sbjct: 302 DQSDAHSWYYLGRVHMIRGDFNAAYEAFQQAVNRDSRNP-TFWC-----SIGVLYYQISQ 355 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIV 166 Y+ A I P + V+Y +G Y I D L + Sbjct: 356 YRDALDAYTRAIRLNP---YISEVWYDLGTLYETCNNQISD----------ALDAYRQAE 402 Query: 167 ERYTNSPYVKGARFYVTVGRN 187 ++P++ + + Sbjct: 403 RLDPSNPHI---KARLDQLIK 420 >gi|157384182|gb|ABV49442.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 241 [Homo sapiens] Length = 1047 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLXT 231 >gi|328772892|gb|EGF82929.1| hypothetical protein BATDEDRAFT_84452 [Batrachochytrium dendrobatidis JAM81] Length = 495 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 35/136 (25%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAAS 115 Y + ++ N +A F++ + L A+ QY G++ +A + Sbjct: 40 YNVGMCAMRTNNLDEAIAAFSRAITLDEY--------LSVAYMQIGICQYHMGEFDEALA 91 Query: 116 LGEEYITQYPESKNVDY-------------VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 EE + +DY + + + + Q T+ ++Y+ Sbjct: 92 NFEESFKMLRGNFFIDYTQLGMEFQVFACHAIFNIALCHLQR--------GDTERGVRYI 143 Query: 163 SRIVERYT-NSPYVKG 177 S ++ +S +V Sbjct: 144 SEAIKAVPVDSDFVPD 159 >gi|320536427|ref|ZP_08036464.1| tetratricopeptide repeat protein [Treponema phagedenis F0421] gi|320146737|gb|EFW38316.1| tetratricopeptide repeat protein [Treponema phagedenis F0421] Length = 865 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 73/226 (32%), Gaps = 45/226 (19%) Query: 53 DVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGK 109 + + + E+Y L+L+ + F KA + + A+ + + V GK Sbjct: 39 EKQDEYEIYSALGQLYLRSEQFQKALSVYKKLQMQN-----AQDADVLNNLGTVYRRLGK 93 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 ++ ++ + + KN + V Y +G +Y + +++E Sbjct: 94 LPESVAILKTALKL---GKNRETVLYNLGNTYKEG--------EVYDRAADCFKQVLELN 142 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYY--------------------LKRGEYVAA 209 N A ++ + E+ I YY K+G+ AA Sbjct: 143 PNDVL---AYNHLGTIQALEKKTELAIETYYKGLLLDPNHPFLHFNLANIFYKQGKLTAA 199 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + + + EA + + Y+ + D A + + Sbjct: 200 LESYLEAVKTMPG---FIEAQKNIADIYLKIGKTDLALHSYKTLIQ 242 >gi|320109185|ref|YP_004184775.1| tetratricopeptide repeat-containing protein [Terriglobus saanensis SP1PR4] gi|319927706|gb|ADV84781.1| Tetratricopeptide TPR_1 repeat-containing protein [Terriglobus saanensis SP1PR4] Length = 606 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 19/159 (11%), Positives = 43/159 (27%), Gaps = 21/159 (13%) Query: 19 LYKFALTIFFSIAVCFLVGWERQ----SSRDVYLDSVTDVRYQREVYEK--AVLFLKEQN 72 + + + I ++AV G R+ + + ++ + A L + Sbjct: 413 MPRVQIVIAATLAVIMAFGIRREIYVWADNISLFTRAVERSPGNKIAQHDLAAGLLDAKR 472 Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 + A + R+ P V + G A + +P ++ Sbjct: 473 YEDAIPLLQKLLREEPNDPVGNN---NLGQAYLNLGDRIHAEGYLAKSCQIHPTARQ--- 526 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171 Y +G + R Q + + N Sbjct: 527 -LYQLGAVRFNLGR--------ADAAEQTFRQAIAMDPN 556 >gi|291536706|emb|CBL09818.1| Tetratricopeptide repeat [Roseburia intestinalis M50/1] gi|291537989|emb|CBL11100.1| Tetratricopeptide repeat [Roseburia intestinalis XB6B4] Length = 454 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 35/89 (39%), Gaps = 9/89 (10%) Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 SL + Y++ K++++ + ++ + K+ Y Y + +Y Sbjct: 373 SLYNQGYSDYNSQKFEESITSLQKVVDMEETYKD-GYALYYLAQAY--------RKNNDL 423 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTV 184 + Y +IVE Y + A+ Y+ + Sbjct: 424 ETAKTYYQKIVELYPGTERAANAQNYINI 452 >gi|284054827|ref|ZP_06385037.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca] Length = 153 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 49/158 (31%), Gaps = 28/158 (17%) Query: 24 LTIFFSIAVCFL---------VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74 L +F ++ C+L + W + + ++ E+ E+A + F Sbjct: 5 LILFLTVVFCWLWLGVVSPYNLAWAATETVGETVAEIS-TLSLDELLERAFSTSQAGRFP 63 Query: 75 KAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 +A Y+ + +P + + + S + +A I P Sbjct: 64 EAESYWTEIINRYPDNPAMWSNRGNVRV-----SQNRLTEAIGDYNRAIELAPT---AAD 115 Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 Y G++Y + R + +R +E Sbjct: 116 AYLNRGVAYEGLGRWSD--------AIADYNRTLELSP 145 >gi|269963686|ref|ZP_06178008.1| fimbrial biogenesis and twitching motility protein, putative [Vibrio harveyi 1DA3] gi|269831598|gb|EEZ85735.1| fimbrial biogenesis and twitching motility protein, putative [Vibrio harveyi 1DA3] Length = 253 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 65/202 (32%), Gaps = 30/202 (14%) Query: 9 ICIFEAWAYQLYKFALTIFFSIAVCFLVGWER--QSSRDVYLDSVTDVRYQREVYEKAVL 66 +C W + L + LVG + + + + + + Sbjct: 2 LCESGMWGIYMKLGKLGALVLASQLGLVGCVTVNEDGNSPVVKADPVSMAESRI-ALGLG 60 Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 +L+ + +A++ Q P + ++ L A + G+ +AA + + + Q+P+ Sbjct: 61 YLESGSMIRAHDNLQQALTHAP-SYY--RAQLSMAHYYETVGEDSKAAQMYKRSLRQHPK 117 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-----VKGARFY 181 + NV ++ Q + +R +E+ PY Sbjct: 118 NGNV--------LNNY---GTFLCKQGEYSQADKMFNRAIEQ----PYYYLIPASYENAG 162 Query: 182 VTVGRNQLAAKEVEIGRYYLKR 203 ++ A K +YY R Sbjct: 163 FCALKSNQAEK----AKYYFTR 180 >gi|255264719|ref|ZP_05344061.1| peptidoglycan-binding domain 1 [Thalassiobium sp. R2A62] gi|255107054|gb|EET49728.1| peptidoglycan-binding domain 1 [Thalassiobium sp. R2A62] Length = 559 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 8/78 (10%) Query: 162 MSRIVERYTNSPYVKGARFYVTVG----RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217 + +ERY + + + A+ + R++ A +E + ++ R + A +Q L Sbjct: 397 LRSYIERYPDGAFSEEAKERLAAIEEDKRDR-ADRE-DRAQWNQARSSHTVAA--YQTYL 452 Query: 218 ANYSDAEHAEEAMARLVE 235 + EA AR+ E Sbjct: 453 RRFPGGAFRNEAQARIAE 470 >gi|291287830|ref|YP_003504646.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus DSM 12809] gi|290884990|gb|ADD68690.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus DSM 12809] Length = 464 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 68/191 (35%), Gaps = 38/191 (19%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCS-RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y A+ + ++N+++A + ++ D F + +S ++ Y A KY+ A Sbjct: 241 YLTALEKVNDKNYTEAGQILDEIKTSDDTFGS----AFFLSGYIAYVARKYETAIESLRR 296 Query: 120 YITQYPESKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 P +N Y+ +SY +++ YD Q + + VE + A Sbjct: 297 ACELEP--ENAAYL-----VSYGNACLKEKKYD-----DASQALKKAVEIKPD-----DA 339 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 + N LA Y+ + A+ F D EA+ L A Sbjct: 340 SAW-----NNLAHS-------YIVSDKIDDAVMAFSKATELKPD---FHEALHNLGLALG 384 Query: 239 ALALMDEAREV 249 L +EA + Sbjct: 385 KLKRYEEAADA 395 >gi|224003111|ref|XP_002291227.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973003|gb|EED91334.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 646 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 13/89 (14%) Query: 66 LFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 ++++ + KA E F R P +L + A+ Y Y +AA EE + Sbjct: 14 DYIRDGEYEKAIEIFETNLDIPRTRP-------ALSLLAYCSYHNQDYARAAEFYEELVA 66 Query: 123 QYPESKNVDY-VYYLVGMSYAQMIRDVPY 150 PE++ Y VY+ + A+ D Sbjct: 67 LCPETEE--YQVYFTQSLVMAEAFLDATR 93 >gi|116250229|ref|YP_766067.1| adenylate cyclase [Rhizobium leguminosarum bv. viciae 3841] gi|115254877|emb|CAK05951.1| putative adenylate cyclase [Rhizobium leguminosarum bv. viciae 3841] Length = 623 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 1/41 (2%) Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 S++ A Q G Y A + E +P + Y Y Sbjct: 488 PDSMIALAKAQVRFGDYPDAVANAERARRLHPMAPEY-YAY 527 >gi|78356518|ref|YP_387967.1| TPR repeat-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218923|gb|ABB38272.1| TPR repeat [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 204 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 5/61 (8%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A F+ ++ +A + N+ P A + L M QY G++ +AA+ E I Sbjct: 91 AQHFMDTGDWQRAQTFLNKLVVAAP----ADSRPLYMLGISQYQLGQHAEAATTFERLIK 146 Query: 123 Q 123 Sbjct: 147 L 147 >gi|15639460|ref|NP_218910.1| hypothetical protein TP0469 [Treponema pallidum subsp. pallidum str. Nichols] gi|3322750|gb|AAC65450.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum str. Nichols] Length = 487 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 46/159 (28%), Gaps = 22/159 (13%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG-------VARKSLLMSA 101 ++ T + + + + +++ A FN+ R P R M A Sbjct: 163 ETATPQHHVHALLSEGKELTERRDYPGAVRVFNKAIRALPAGDAVFAADAYTRMGEAMYA 222 Query: 102 FVQYSAGK-------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 Q+ + A +E + P S +YL D DQ Sbjct: 223 LSQHDNRDGFERTRALETATVYVKEALRLNPRSAA---AHYLAACIADAQPDD---DQTT 276 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193 +L+ + + R Y + R A+E Sbjct: 277 ALTLLERAAALDRR--EYRYSYELGKRLFAVRRFAEAQE 313 >gi|148252938|ref|YP_001237523.1| putative adenylate cyclase [Bradyrhizobium sp. BTAi1] gi|146405111|gb|ABQ33617.1| putative Adenylate cyclase [Bradyrhizobium sp. BTAi1] Length = 581 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 25/71 (35%), Gaps = 13/71 (18%) Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ-RATKLML 159 A+ Y +Y+ A S E + YP L ++ IR Q T Sbjct: 491 AYSHYLLDRYEAALSWAREELFLYPNH--------LQALT----IRAATLAQLGETDQAR 538 Query: 160 QYMSRIVERYT 170 Q + + ERY Sbjct: 539 QAIGVLGERYP 549 Score = 35.9 bits (82), Expect = 6.2, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258 Y AA+ + L Y + +A+ L D+AR+ + ++ ERYP Sbjct: 498 DRYEAALSWAREELFLYPN---HLQALTIRAATLAQLGETDQARQAIGVLGERYP 549 >gi|326492345|dbj|BAK01956.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 589 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 65/178 (36%), Gaps = 26/178 (14%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ----CSRDFPFA 90 LV +E++ + + + ++ ++ K ++KA + + + D F+ Sbjct: 397 LVSFEKEKESWDLKSNAEKIEAASKKKDEGNVWFKMGKYAKASKRYEKAAKYIEYDSSFS 456 Query: 91 GVARK--------SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +K L +A + Y++A L + + ES NV Y +Y Sbjct: 457 EDEKKQTKAVKISIKLNNAACKLKLKDYKEAEKLCTKVLEL--ESTNVK-ALYRRAQAYT 513 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 Q++ +L + + +E ++ VK A +++L ++Y Sbjct: 514 QLVD--------LELAELDIKKALEIDPDNREVKVAYK---ALKDKLREYNKRDAKFY 560 >gi|319952793|ref|YP_004164060.1| tetratricopeptide tpr_1 repeat-containing protein [Cellulophaga algicola DSM 14237] gi|319421453|gb|ADV48562.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga algicola DSM 14237] Length = 252 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 8/84 (9%), Positives = 26/84 (30%), Gaps = 7/84 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++++ A + + A + + + + + + V Y K + Sbjct: 20 NAKLFDAANTAYNDGKYEVAEKTYLKIVDN---GEASSELYFNLGNVYYKENKIAPSIYY 76 Query: 117 GEEYITQYPESKNV----DYVYYL 136 E+ + P ++ Y + Sbjct: 77 YEKALLLKPNDSDIKNNLAYAQNM 100 >gi|318042848|ref|ZP_07974804.1| TPR repeat-containing protein [Synechococcus sp. CB0101] Length = 256 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 5/74 (6%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + +Y + ++ A + F P +AR S +A + G+ Sbjct: 122 EPPDASALYNLGNVQGSRGQWTDARDSFVEAADTR-PGFAMARSS---AALAAFQLGELD 177 Query: 112 QAASLGEEYITQYP 125 QA + I +YP Sbjct: 178 QAEAELRRLIRRYP 191 >gi|300115220|ref|YP_003761795.1| peptidase M48 Ste24p [Nitrosococcus watsonii C-113] gi|299541157|gb|ADJ29474.1| peptidase M48 Ste24p [Nitrosococcus watsonii C-113] Length = 536 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 18/127 (14%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFV 103 L + V Y++ L+E N +A + P R++L + V Sbjct: 283 AKLAPLKQVETAYAAYDQGRKALQEGNLEQALGLAERAITKEP-----REALFYGLRGDV 337 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + +YQ+A + I + + Y Y G+ + ++ Q + Sbjct: 338 HLAKERYQEALADYNRAIK---RNDHFFYFYNQRGLVNKAL--------GHSEKARQDLR 386 Query: 164 RIVERYT 170 + + Sbjct: 387 QSIALLP 393 >gi|288942093|ref|YP_003444333.1| TPR repeat-containing protein [Allochromatium vinosum DSM 180] gi|288897465|gb|ADC63301.1| TPR repeat-containing protein [Allochromatium vinosum DSM 180] Length = 590 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 23/166 (13%) Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 K +A +L E ++ P + + M Y Q++ D+R + R++ Sbjct: 240 DDKRPEARALLESFVETNPGDRALK-------MLYGQLLV----DEREFSTAREVFERML 288 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-------IPRFQLV--- 216 Y P V A +++ LA + GR Y A R + V Sbjct: 289 REYPKDPDVLFAVGILSLQLEDLAGARLHFGRLYETGQRQDEAAFYLGQTAERAEDVATA 348 Query: 217 LANYSDAE--HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 L Y+ +A++A RL + +ARE++ ++++ P Sbjct: 349 LDWYAKVSGANADDARVRLAFLRAKRGEVAQAREILQRMRDQSPDN 394 >gi|239832835|ref|ZP_04681164.1| TPR repeat-containing protein [Ochrobactrum intermedium LMG 3301] gi|239825102|gb|EEQ96670.1| TPR repeat-containing protein [Ochrobactrum intermedium LMG 3301] Length = 230 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 42/130 (32%), Gaps = 17/130 (13%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + + A + EQ + A ++ N+ P A + A V + Y A Sbjct: 113 LMQWANAAMLEQRYPSAIDFLNEAIALDP--EYAE-AWNRRATVYFLKKDYAHAMYDINR 169 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P L GM+ +R + + L+ + + Y ++ A+ Sbjct: 170 TLELEPRHYGA-----LTGMATILRLRGLK------EQALKAYEQALIVYPM---MRDAQ 215 Query: 180 FYVTVGRNQL 189 ++L Sbjct: 216 KNFNDLADEL 225 >gi|119512304|ref|ZP_01631390.1| hypothetical protein N9414_22308 [Nodularia spumigena CCY9414] gi|119463017|gb|EAW43968.1| hypothetical protein N9414_22308 [Nodularia spumigena CCY9414] Length = 280 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 12/96 (12%), Positives = 28/96 (29%), Gaps = 16/96 (16%) Query: 34 FLVGWERQSSRDVYLDSVT-------DVRYQREVYEKAVLFLKEQNFSKAYEYFN---QC 83 FL+G ++D + + ++ ++QN+ A + + Sbjct: 82 FLLGGLHLQAKDFEPAMAALQKAQSLNPQNPEILFALGSANFQKQNYQAAATLYQQGLKL 141 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 D P Y G+ +A + + Sbjct: 142 KSDNPEGWF------DLGNAYYMLGRLPEAIAQYNK 171 >gi|222054406|ref|YP_002536768.1| Peptidoglycan-binding LysM [Geobacter sp. FRC-32] gi|221563695|gb|ACM19667.1| Peptidoglycan-binding LysM [Geobacter sp. FRC-32] Length = 198 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 22/47 (46%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107 Y++A+ K+ SKA + F + +FP + +A + L A Sbjct: 149 YQRAIAAYKKGQLSKALQEFERFLAEFPNSPLAADASLYRADCLLKM 195 >gi|22299903|ref|NP_683150.1| hypothetical protein tlr2360 [Thermosynechococcus elongatus BP-1] gi|22296088|dbj|BAC09912.1| tlr2360 [Thermosynechococcus elongatus BP-1] Length = 350 Score = 36.2 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 33/94 (35%), Gaps = 10/94 (10%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYS 106 V + ++ ++ N+++A + Q P + ++ Sbjct: 21 PVHANSPVSRLMQEGQRLVEGGNYAQALAIYQQLLESESRNP------RVHSAIGYIYAQ 74 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVY-YLVGM 139 G++ +AA + I ++ + Y Y +GM Sbjct: 75 QGQFGEAARAYQRAIELDQQNADFYYALGYSLGM 108 >gi|332716357|ref|YP_004443823.1| transcriptional regulator, SARP family [Agrobacterium sp. H13-3] gi|325063042|gb|ADY66732.1| transcriptional regulator, SARP family [Agrobacterium sp. H13-3] Length = 642 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 7/59 (11%) Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 KR +Y AA+ + + E A+ L ++ +D ARE S +QE YP Sbjct: 560 FKREDYGAAVELCARMEND-------EPALRVLTASHALHGDLDAARETGSRLQENYPG 611 >gi|322504590|emb|CAM37991.2| putative serine/threonine protein phosphatase type 5 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 469 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 18/139 (12%), Positives = 43/139 (30%), Gaps = 25/139 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++ ++ +E+ F A + ++ L AF A + +E Sbjct: 9 QEGNVYFQEKKFQHAVDSYSLAIEA-----HKTPTLLCNRAFAYLKLELPGAALADAQEA 63 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I P +Y ++ + K + + +++ S K A+ Sbjct: 64 IEIDPGFVK---AHYRKASAHLLL--------GKFKDAQREFAAVLKLVP-SE--KDAQR 109 Query: 181 YVTVGRNQLAAKEVEIGRY 199 + KE++ R+ Sbjct: 110 KYDLC-----EKELKRIRF 123 >gi|315453877|ref|YP_004074147.1| hypothetical protein HFELIS_14730 [Helicobacter felis ATCC 49179] gi|315132929|emb|CBY83557.1| putative periplasmic protein [Helicobacter felis ATCC 49179] Length = 331 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 53/140 (37%), Gaps = 13/140 (9%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 ++ D D+ + +++++A+ ++++F +A F + Sbjct: 183 TSQNKSEEADFNKDLSRKPKIFQEALSLYRQKHFKQAQARFVWLGDN----------DFK 232 Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDY-VYYLVGMSYAQMIRDVPYDQRATKLM 158 SA+ Y AG+ A +E I Y +S + Y+ + + + T Sbjct: 233 SAYSYYMAGEAAYAQKNYKEAIVLYKKSALIKEKAEYMPVLLWHTAWSFRFLGNQNTY-- 290 Query: 159 LQYMSRIVERYTNSPYVKGA 178 L+++ + Y +S K A Sbjct: 291 LKFLHSLSSLYPDSEQGKKA 310 >gi|297691491|ref|XP_002823118.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like isoform 2 [Pongo abelii] Length = 882 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 52/155 (33%), Gaps = 30/155 (19%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP-YDQRAT 155 LL + + + +A ++ + P+ V +S + +Q Sbjct: 756 LLSAIYS--KQENHDKALDAIDKALQLKPKDPKV--------ISELFFTKGNQLREQNLL 805 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVG-RNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 + V+ + A+ ++ +G + +G+YV+A ++ Sbjct: 806 DKAFESYRVAVQLNPD-----QAQAWMNMGGIQHI-------------KGKYVSARAYYE 847 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 L D++ +E +A+L L + E + Sbjct: 848 RALQLVPDSKLLKENLAKLDRLEKRLQEVREKDQT 882 >gi|225718258|gb|ACO14975.1| FK506-binding protein 6 [Caligus clemensi] Length = 334 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 8/88 (9%) Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 ++ E + A + + + +L +G +L+ G+Y + VLA+ D Sbjct: 206 KLFEILPVKDDKEDAERKILLHKLRL-----NVGLCFLQTGKYAPTCGVMREVLADEPD- 259 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVS 251 A+ R+ +A L ++EAR + Sbjct: 260 --NVRALYRMGKAKRMLGGIEEARSYLK 285 >gi|195995663|ref|XP_002107700.1| hypothetical protein TRIADDRAFT_18957 [Trichoplax adhaerens] gi|190588476|gb|EDV28498.1| hypothetical protein TRIADDRAFT_18957 [Trichoplax adhaerens] Length = 938 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 36/119 (30%), Gaps = 18/119 (15%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA------------RFYVTVGRN 187 + Q +D ++R L +++ + Y + Sbjct: 619 TLYQPTKDPDKNRRHRDRALSLYKQVIRLDPRNIYAANGIGAVLAQSSFHQESREIFAQV 678 Query: 188 QLAAKEVE-----IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 + A ++ + Y ++ +Y AI ++ + +S E + L AY Sbjct: 679 REATADMFDVWLNLAHVYTEQQQYSIAIQMYRSCIERFS-MNQNTEVLLYLARAYFKDG 736 >gi|160892479|ref|ZP_02073270.1| hypothetical protein CLOL250_00007 [Clostridium sp. L2-50] gi|156865849|gb|EDO59280.1| hypothetical protein CLOL250_00007 [Clostridium sp. L2-50] Length = 654 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 12/94 (12%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQRE-----VYEKAVLFLKEQNFSKAYEYFNQCSRD 86 C L G ++ + D + E Y AV + ++ A + F + Sbjct: 368 GCALEGEKKYDEAIQAFTAAGDYQDAAEKIKECYYNDAVDKMAAGDYINAKDLFVKSE-- 425 Query: 87 FPFAGVARKS---LLMSAFVQYSAGKYQQAASLG 117 + A K+ L + A S Y +A Sbjct: 426 --YNDYADKANECLCLLAEQYVSQQDYSKAIETY 457 >gi|124009003|ref|ZP_01693688.1| tetratricopeptide repeat family protein, putative [Microscilla marina ATCC 23134] gi|123985429|gb|EAY25337.1| tetratricopeptide repeat family protein, putative [Microscilla marina ATCC 23134] Length = 748 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 12/127 (9%), Positives = 39/127 (30%), Gaps = 14/127 (11%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + +++A + F + + + + +Y +A + + I Sbjct: 35 SQGKAKSEAGAYAQAIQDFTKAINL---NSHSDDAYHYRGEAYFRVRRYVKALADFNKAI 91 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE-RYTNSPYVKGARF 180 P + Y +L G+ + + K + ++ ++ Y++ Y Sbjct: 92 EIDPRQSSASY--HLRGLVKYNL--------KLYKQAIADYNQAIKIAYSDETYFVDRAK 141 Query: 181 YVTVGRN 187 + Sbjct: 142 AFLELKR 148 >gi|111120312|gb|ABH06341.1| hypothetical protein LOC55020 [Bos taurus] Length = 460 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 47/147 (31%), Gaps = 29/147 (19%) Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQ----------REVYEKAVLFLKEQNFSKAYEYFN 81 L+G D LD+ + +++ AV + NF KA E + Sbjct: 73 GLVLIGTGSSVRLDKELDAAVKTMVEISKTQPLTHREQLHVSAVETFAKGNFPKACELWE 132 Query: 82 QCSRDFPFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYY 135 Q +D P M A + G +Q YP + ++ Y Sbjct: 133 QILQDHPTD--------MLALKFSHDAYFYLGYQEQMRDSVAR---VYPFWTPDISLSSY 181 Query: 136 LVGMSYAQMIRDVPYDQ--RATKLMLQ 160 + G+ ++ YDQ + K L Sbjct: 182 VKGIYSFGLMETNLYDQAKKLAKEALA 208 >gi|51598455|ref|YP_072643.1| hypothetical protein BG0193 [Borrelia garinii PBi] gi|51573026|gb|AAU07051.1| conserved hypothetical protein [Borrelia garinii PBi] Length = 379 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 71/212 (33%), Gaps = 36/212 (16%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 K+ N+ KA Y+ +C P +L + Y++A + EEY+ PE+ Sbjct: 70 KKNNYDKAIVYYQRCLVKHPNNNY---ALFGLGDCYRNLDDYKKATDIWEEYLKYDPENI 126 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180 V V SY ++ + + Q +++E + Y + Sbjct: 127 T---VLTRVAASYRKL--------KNFQKSKQTYLKVMELIPENDYALVGIGHLYYDFKE 175 Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 Y + L E+ IG Y K E+ I F+ L + A Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGIYFFKKALEI---SPSNFYA 232 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + L + Y EA + I E+ P+ Sbjct: 233 VFGLADCYRGNKDYKEALKYWLDIVEKDPKNN 264 >gi|3789905|gb|AAC67538.1| developmental protein DG1071 [Dictyostelium discoideum] Length = 581 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 73/212 (34%), Gaps = 26/212 (12%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 ++ ++ +A E+ + P A L Y Y A E+ IT+ P+ Sbjct: 50 QQGDYYEAGEWIREVLDIQPDNQEAWALYGNLHL----YKEEWYP-AQKNFEQ-ITENPD 103 Query: 127 SKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 +KN Y +G Y + ++ Q+ +R++ + + Y + Sbjct: 104 NKNETYASLSLGNIYYNAKFSNPDKVEKYILNAEQFYNRVLTKNPTNIYAANGIGMIIAE 163 Query: 186 RNQL--AA------KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 + L A +E V + Y+ +G + AI ++ L + + E Sbjct: 164 KGNLNLAGETFLQIREASMDCIPVSVNLAHIYVSKGLFDNAIKLYEGCLKKSTSPKEIET 223 Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260 + L + Y ++++ + YP Sbjct: 224 IIMYLAKVYFDANRFYDSKQTLKKAIHMYPHN 255 >gi|62182120|ref|YP_218537.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62129753|gb|AAX67456.1| putative TPR-repeat-containing protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322716609|gb|EFZ08180.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 1180 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 466 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 522 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 523 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 569 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 570 AALAHLNTL----PTSQW 583 >gi|52425829|ref|YP_088966.1| NrfG protein [Mannheimia succiniciproducens MBEL55E] gi|52307881|gb|AAU38381.1| NrfG protein [Mannheimia succiniciproducens MBEL55E] Length = 255 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 47/158 (29%), Gaps = 22/158 (13%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR-----EVYEKAVLFLKEQ--NF 73 K AL + A+ G S +Y + + ++ + Sbjct: 7 KKALFLSLIFALGGCSGLPMSDSESFVAKEKLYHSTNNYNGLISLYREQLKTTEDNSVRY 66 Query: 74 SKAYEYFNQ------CSRDFP----FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 A Y+ + P + + ++ Y +A S I++ Sbjct: 67 KLALTYYQKGDSQSSLDYLQPLLNEQNLYFQSATILQIRNLIQLQNYNEAISSASMLISK 126 Query: 124 YPESKNVDYVYYLVGMSYAQM--IRDVPYDQRATKLML 159 YP + Y L G++ AQ+ ++ D + + Sbjct: 127 YPHNSE---AYNLRGIANAQLGKYKNAEQDINSARNRF 161 >gi|14626032|emb|CAC44018.1| BcsC protein [Salmonella typhimurium] Length = 1053 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 339 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 395 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 396 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 442 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 443 AALAHLNTL----PTSQW 456 >gi|305665752|ref|YP_003862039.1| TPR domain-containing protein [Maribacter sp. HTCC2170] gi|88710516|gb|EAR02748.1| TPR domain protein [Maribacter sp. HTCC2170] Length = 851 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 89/265 (33%), Gaps = 56/265 (21%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY------EKAVLFLKEQNF 73 YK LT +A L + + + +Y E+ L ++ Sbjct: 5 YKIILTAV--LATLILSACSTKKDAFLNRNWHAMNTKFNTLYNGDIAFEQGREELNS-SY 61 Query: 74 SKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP------ 125 +Y+ R V L S + + A + I ++ Sbjct: 62 QD--DYWEVLPIERL----EVTENIKLDSED---NNPNFIIAEEKATKAIQKHSMDINEE 112 Query: 126 -ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184 + D + L+G + +DQR L+ + I+++Y S + A + Sbjct: 113 ERNPMTDEAFLLLGKARY-------FDQRYM-PALEAFNYILKKYYESDKLNEANIWREK 164 Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL--ANYSDAEHAEEAMARLVEAYVALAL 242 +L +E+ AI + ++ N D E+A +A A + +AY+ L + Sbjct: 165 VNIRLENEEL--------------AIKNLKRLMKFENLKDQEYA-DARAMMAQAYINLNV 209 Query: 243 MDEAREVVSLI----QERYPQGYWA 263 D A + + + ++ +G + Sbjct: 210 PDTAIQHLKVASYYTKKNPEKGRYY 234 >gi|298375300|ref|ZP_06985257.1| TPR domain protein [Bacteroides sp. 3_1_19] gi|298267800|gb|EFI09456.1| TPR domain protein [Bacteroides sp. 3_1_19] Length = 681 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 71/225 (31%), Gaps = 52/225 (23%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCS 84 + ++AV F+ + + + D +T Y + ++L++ + KA +N+ Sbjct: 101 MLVNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAI 160 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQ 143 P+ A + A + Y Y+ A + E + YY+ G+ Q Sbjct: 161 EMDPY--YAP-AYGNRAILHYQMDDYKDALADLNEALRLDTRESG----YYINRGLVRYQ 213 Query: 144 MIR----DVPYDQ----------------------RATKLMLQYMSRIVERYTNSPYVKG 177 M YDQ ++ ++++ ++ Sbjct: 214 MNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQQEPDN----- 268 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 Y+ L E G+Y A+ + +VL Y Sbjct: 269 ---YMAYYNRALLRFE---------TGDYRGAVQDYDVVLKQYPT 301 >gi|293373139|ref|ZP_06619503.1| hypothetical protein CUY_4844 [Bacteroides ovatus SD CMC 3f] gi|292631910|gb|EFF50524.1| hypothetical protein CUY_4844 [Bacteroides ovatus SD CMC 3f] Length = 467 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 5/66 (7%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSD--AEHAEEAMARLVEAYVALALMDEAREVVS 251 I ++Y E +AI + +L Y + M + E Y L D+A + Sbjct: 91 FFISQFY---NEPDSAIKYGKEILEKYQEELNSSVPSIMYFMAEDYATLGHYDKASAFLH 147 Query: 252 LIQERY 257 + E Y Sbjct: 148 SLNEAY 153 >gi|189045280|sp|Q64375|SC65_RAT RecName: Full=Synaptonemal complex protein SC65; AltName: Full=Leprecan-like protein 4 Length = 414 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVD-YVYYLVGM 139 + + A + ++A + ++ + P+ + Y+ Y GM Sbjct: 127 YAHFKANRLEKAVAAAYTFLQRNPKHELTAKYLNYYRGM 165 >gi|115746650|ref|XP_783511.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 503 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 49/160 (30%), Gaps = 24/160 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKS 96 +S++V + + +R +A+ + E N +A + F + P + A+++ Sbjct: 156 MGDTSKEVTDEMQDEANSKR---SEAMAAVSEGNIEEAIKIFTEAIEINPHSALLHAKRA 212 Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 K A ++ I P+S VY G ++ + Sbjct: 213 S-----CFVRLNKPNAAIRDCDKGIDLNPDS---AQVYKWRGKAH--------RLLGHWE 256 Query: 157 LMLQYMSRIVER-YTNSPY--VKGARFYVTVGRNQLAAKE 193 + + + Y S Y +K E Sbjct: 257 EAFRDLQMACKLDYDESAYEMLKEVEPRAKKIVEHKRKYE 296 >gi|94967940|ref|YP_589988.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94549990|gb|ABF39914.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 515 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 21/158 (13%), Positives = 49/158 (31%), Gaps = 19/158 (12%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100 ++S+ D + +++ A + + +A Y +C P + LL Sbjct: 249 EASKLFQQALQLDPKSFDLLFDGARFSGQHNRWDEAVGYLQKCDEVNPDRP---EVLLKL 305 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + ++A S+ + P N Y++ + + + Sbjct: 306 TLAYLKTRRREKAVSVARRLASVSPNDPN---AQYILAFALVEN--------ELWETAEP 354 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 + VE+ A + +G L E++ R Sbjct: 355 MARKAVEQNPK-----DANSQLLMGIIHLNKGELDAAR 387 >gi|6324580|ref|NP_014649.1| Sgt2p [Saccharomyces cerevisiae S288c] gi|74676529|sp|Q12118|SGT2_YEAST RecName: Full=Small glutamine-rich tetratricopeptide repeat-containing protein 2; AltName: Full=SGT/UBP; AltName: Full=Viral protein U-binding protein gi|1151003|gb|AAC49487.1| hypothetical protein UNF346 [Saccharomyces cerevisiae] gi|1420100|emb|CAA99195.1| unnamed protein product [Saccharomyces cerevisiae] gi|151945636|gb|EDN63877.1| small glutamine-rich tetratricopeptide repeat-containing protein [Saccharomyces cerevisiae YJM789] gi|190407348|gb|EDV10615.1| small glutamine-rich tetratricopeptide repeat-containing protein 2 [Saccharomyces cerevisiae RM11-1a] gi|256273998|gb|EEU08914.1| Sgt2p [Saccharomyces cerevisiae JAY291] gi|259149491|emb|CAY86295.1| Sgt2p [Saccharomyces cerevisiae EC1118] gi|285814896|tpg|DAA10789.1| TPA: Sgt2p [Saccharomyces cerevisiae S288c] gi|323303065|gb|EGA56868.1| Sgt2p [Saccharomyces cerevisiae FostersB] gi|323307123|gb|EGA60406.1| Sgt2p [Saccharomyces cerevisiae FostersO] gi|323335705|gb|EGA76988.1| Sgt2p [Saccharomyces cerevisiae Vin13] Length = 346 Score = 36.2 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 17/139 (12%), Positives = 40/139 (28%), Gaps = 20/139 (14%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAF 102 ++ D ++ + + +++ A + + + P A ++ Sbjct: 90 NIPEDDAETKAKAEDLKMQGNKAMANKDYELAINKYTEAIKVLPTNAIYYANRAA----- 144 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 S +Y QA E I+ P Y G + Y Q + L+ Sbjct: 145 AHSSLKEYDQAVKDAESAISIDPS--------YFRG---YSRLGFAKYAQGKPEEALEAY 193 Query: 163 SRIVERYTNSPYVKGARFY 181 ++++ A Sbjct: 194 KKVLDI--EGDNATEAMKR 210 >gi|149914335|ref|ZP_01902866.1| Tetratricopeptide TPR_2 [Roseobacter sp. AzwK-3b] gi|149811854|gb|EDM71687.1| Tetratricopeptide TPR_2 [Roseobacter sp. AzwK-3b] Length = 190 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 10/72 (13%), Positives = 24/72 (33%), Gaps = 3/72 (4%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 Y +E+ ++ + ++ A + F P A AF+ + + A Sbjct: 72 YAQELLDEGMSRRNIYDYDGAMKAFEALIAYCP--DYAE-GYNQRAFIHFLREDFSAALP 128 Query: 116 LGEEYITQYPES 127 ++ + P Sbjct: 129 DLDQTLALSPRH 140 >gi|126660379|ref|ZP_01731491.1| peptidase, M48B family protein [Cyanothece sp. CCY0110] gi|126618352|gb|EAZ89109.1| peptidase, M48B family protein [Cyanothece sp. CCY0110] Length = 672 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ + + L++Q +S+A +++P + + L+ A G+ +A +L Sbjct: 4 DLLNEGLKALQQQQYSQAVSLLGNFCQNYPDRNSDCYLQGLIALARAYRGNGQQDKAITL 63 Query: 117 GE 118 + Sbjct: 64 AQ 65 >gi|325507817|gb|ADZ19453.1| Serine/threonine protein kinase fused to TPR repeats domain [Clostridium acetobutylicum EA 2018] Length = 640 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 22/111 (19%) Query: 61 YEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y + +QN KA EYF ++ K+ + G+Y Q+ Sbjct: 309 YNNIIENGSKQNGDKAVEYFKQAVDKN----SSNPKAYIKIIDTYLENGEYDQSID---- 360 Query: 120 YITQYPESKNVD-----YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +I +K + + + +GM+Y D + QY ++I Sbjct: 361 FIETNLNNKQSELLKDNELLFKIGMAYF--------DDESYAKAYQYFNKI 403 >gi|156552647|ref|XP_001603324.1| PREDICTED: similar to protein phosphatase-5 [Nasonia vitripennis] Length = 490 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 51/174 (29%), Gaps = 45/174 (25%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVA 93 + + + S D+ + EKA F K QN+ +A + + P + Sbjct: 2 SENAVEEPRVPSPEDIAEAEKYKEKANEFFKNQNYDEAVALYTKAIDLNPSVAIYYG--- 58 Query: 94 RKSLLMSAFVQ-------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 +F Y+ +A L Y+ YY + + Sbjct: 59 -----NRSFAFLKTECFGYALRDASKAIELDRNYLK----------GYYRRAAANMSL-- 101 Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG---RNQLA-AKEVEI 196 KL L+ +++ N A+ T +LA K + + Sbjct: 102 ------GKFKLALKDYEAVMKARPNDK---DAKAKFTECNKIVKKLAFEKAIAV 146 >gi|87121301|ref|ZP_01077191.1| TPR domain protein [Marinomonas sp. MED121] gi|86163458|gb|EAQ64733.1| TPR domain protein [Marinomonas sp. MED121] Length = 579 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 46/144 (31%), Gaps = 33/144 (22%) Query: 13 EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72 + LY+F + SI + L ++ + + S D +KA + + + Sbjct: 312 PFLFWLLYQFRAGVMLSIFILVLPIAQKADASPLDWFSTPD--------QKAQKLVDQGD 363 Query: 73 FSKAYEYFNQCS----RDFPFAGV--ARKSLLM----------SAF----VQYSAGKYQQ 112 + A F + A + L A+ AG + Sbjct: 364 WENAQPLFENPKWQAASQYALGNYEAAAQ-QLEDLNKQNNSSSLAYNKGNSLALAGNLEA 422 Query: 113 AASLGEEYITQYPE----SKNVDY 132 A + E+ + P+ +N+DY Sbjct: 423 AITAYEDALNLNPDFKEAQENLDY 446 >gi|67923375|ref|ZP_00516856.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] gi|67854800|gb|EAM50078.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] Length = 176 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 48/143 (33%), Gaps = 24/143 (16%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVARKSLLMSA--FVQYS 106 + E YE A L+L ++ + +A + + P K+L+ +A F +S Sbjct: 48 EKGTAEEYYELASLYLDKKLYVQAVNLLQKGLKTGKKLEPEN----KALMYNAMGFAYFS 103 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 + A ++ I YP+ Y++ ++ + + + Sbjct: 104 QEQLDLAIRNYKDAIKLYPD--------YVIALNNLGNAYEKKQMISKAVEAYEETLKF- 154 Query: 167 ERYTNSPYVKGARFYVTVGRNQL 189 K A+ + R +L Sbjct: 155 -----DEDNKIAKRRADLLRKRL 172 >gi|157384200|gb|ABV49451.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 222 [Homo sapiens] Length = 770 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|329896152|ref|ZP_08271365.1| AcrB/AcrD/AcrF family protein [gamma proteobacterium IMCC3088] gi|328921971|gb|EGG29336.1| AcrB/AcrD/AcrF family protein [gamma proteobacterium IMCC3088] Length = 1033 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 31/93 (33%), Gaps = 20/93 (21%) Query: 99 MSAFVQYSA------GKYQQAASLGEEYITQYPESKNVD-----------YVYYLV--GM 139 ++Q + A + ++ Q+P+ + +D Y Y G+ Sbjct: 558 DQIYIQVKLPNGRSIDETLATAKAMDAFVRQHPQVRRIDWTVGESAPPFYYNMYRKMDGV 617 Query: 140 SYAQMIRDVPYDQRATKLMLQYMS-RIVERYTN 171 S + D + T ++ + ++ + N Sbjct: 618 STWAEALVLTRDPKKTNAAIRELQGQLDHAFPN 650 >gi|303245631|ref|ZP_07331914.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio fructosovorans JJ] gi|302492894|gb|EFL52759.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio fructosovorans JJ] Length = 627 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 28/80 (35%), Gaps = 4/80 (5%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS-AGKYQ 111 + E+ A + ++ A + + ++ +P + +LL A + K Sbjct: 88 EAWTNAEL---AERSYLDADWEAAASLYARVAKAYPRHAWSDDALLRRADILAEHLKKPD 144 Query: 112 QAASLGEEYITQYPESKNVD 131 A + + +P+ D Sbjct: 145 AAKADLRRILRDHPKGDMAD 164 >gi|225444762|ref|XP_002279485.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1064 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 79/253 (31%), Gaps = 77/253 (30%) Query: 63 KAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 K L L + + +A+ F + P +LL A V+++ G+Y + L + Sbjct: 134 KGQLLLAKGDVEQAFAAFKIVLDGDRDNVP-------ALLGQACVEFNRGRYSDSLDLYK 186 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + YP+ + + ++ D + ++ M R E Y Y A Sbjct: 187 RALQVYPDCPAALDPENVEALVALGIMDLHTNDASGIRKGMEKMQRAFEIYP---YCAMA 243 Query: 179 RFYVT---------VGRNQLAAKEVEI---------------------------GRYYL- 201 Y+ QL + + G YY+ Sbjct: 244 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 303 Query: 202 -----------------------KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238 K G++ +++ F+ VL Y + EA+ L YV Sbjct: 304 SVKESNKPHDFVLPYYGLGQVQLKLGDFRSSLSNFEKVLEVYPE---NCEALKALGHIYV 360 Query: 239 ALALMDEAREVVS 251 L ++A+E + Sbjct: 361 QLGQTEKAQEYLR 373 >gi|195572170|ref|XP_002104069.1| GD18641 [Drosophila simulans] gi|194199996|gb|EDX13572.1| GD18641 [Drosophila simulans] Length = 520 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 39/140 (27%), Gaps = 25/140 (17%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110 D + + LK + FSKA + + + P + A +SL + Sbjct: 45 DFAAAEQYKNQGNEMLKTKEFSKAIDMYTKAIELHPNSAIYYANRSL-----AHLRQESF 99 Query: 111 QQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 A G + P Y+ YY ++ + K L + + Sbjct: 100 GFALQDGVSAVKADP-----AYLKGYYRRAAAHMSL--------GKFKQALCDFEFVAKC 146 Query: 169 YTNSPYVKGARFYVTVGRNQ 188 N A+ T Sbjct: 147 RPNDK---DAKLKFTECNKI 163 >gi|186681165|ref|YP_001864361.1| hypothetical protein Npun_R0666 [Nostoc punctiforme PCC 73102] gi|186463617|gb|ACC79418.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102] Length = 532 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 15/133 (11%), Positives = 35/133 (26%), Gaps = 26/133 (19%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +A + + +A + P + A + V ++ GK +A + ++ + Sbjct: 171 NEADRLREAKKLEEAVVKYKAALSLDPNSVYAHNA---LGVVLHTQGKLSEAIAAYQKAL 227 Query: 122 TQYPESKNV----------------DYVYYLVGMSYAQMIRDVP-------YDQRATKLM 158 P N Y + D +DQ Sbjct: 228 QIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRLDPNDADTHCNLGIALHDQGKLSEA 287 Query: 159 LQYMSRIVERYTN 171 + + ++ N Sbjct: 288 IAAYQKALQIDPN 300 >gi|160941961|ref|ZP_02089284.1| hypothetical protein CLOBOL_06853 [Clostridium bolteae ATCC BAA-613] gi|158435125|gb|EDP12892.1| hypothetical protein CLOBOL_06853 [Clostridium bolteae ATCC BAA-613] Length = 352 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 28/75 (37%), Gaps = 4/75 (5%) Query: 62 EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAASLGEE 119 + + L+ +++ A F+ + A R LL A ++ Y A + Sbjct: 81 AEGIEKLEAGDYAGAIGSFDTALEKSGKGAEDFNRDVLLYRADAEFLLKDYNAAIHTYDL 140 Query: 120 YITQYPESKNVDYVY 134 + P++ Y+Y Sbjct: 141 LLEMKPDTPE--YMY 153 >gi|153869026|ref|ZP_01998727.1| Tetratricopeptide TPR_2 [Beggiatoa sp. PS] gi|152074416|gb|EDN71273.1| Tetratricopeptide TPR_2 [Beggiatoa sp. PS] Length = 621 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 72/228 (31%), Gaps = 34/228 (14%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQ-------CSRDFPFAGVARKSLLMSAFVQYSAGKY 110 ++Y + N+ A + + Q V K L+ + +Y Sbjct: 42 SQIYMSGLKAYNIANYPTAIKKWEQGLNLTRLIKYRQEDGQVIAKFLVSIGVAYKKSNQY 101 Query: 111 QQAASLGEE----YITQYPESK--------NVDYV---YYLVGMSYAQMIRDVPYDQRAT 155 Q+A ++ Y + + V Y Y ++Y Q + Sbjct: 102 QKALIYFQQSLKIYRKINDKHEIKKHLLIIGVTYYKLRQYQKSLNYYQQSLKIYRKIGDR 161 Query: 156 KLMLQYMSRIVERYTN-SPYVKGARFYVTVG-RNQLAAKEVEIGRY-------YLKRGEY 206 + + + +I Y N Y K +Y N+ + I + Y K G+Y Sbjct: 162 RGEISVLYKISMIYNNLGQYKKTLSYYQQALEINRKIDDNIGIAVFLTQIGIVYTKLGQY 221 Query: 207 VAAIPRFQLVLA-NYSDAEHAEEAMARLVEA--YVALALMDEAREVVS 251 A+ +Q +L N + +++ A Y+ L +A + Sbjct: 222 QQALNYYQQILEINLKTDDEYGKSVYFNNTAVVYLELGQYQKALDYYK 269 >gi|149176894|ref|ZP_01855504.1| TPR repeat [Planctomyces maris DSM 8797] gi|148844331|gb|EDL58684.1| TPR repeat [Planctomyces maris DSM 8797] Length = 485 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 55/168 (32%), Gaps = 21/168 (12%) Query: 5 LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64 L +AI + A Y AL F + L + + + DS+ + + + Sbjct: 138 LTKAIEMDPKNAQYYYTRALF-FMTRGGAELAVKDFTKAIECKPDSL------QALNNRG 190 Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 +LF +A F + P + ++ F + + +A + + Sbjct: 191 LLFATTGKLKQARADFERVLEIKPDS---IDAMNNLGFALMNLNETDKALEVLNRVLQLN 247 Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 P+ N Y G+ + + + + ++ +E NS Sbjct: 248 PKYLN---AYDNRGLVWQRR--------KEYDKAIADFTKAIELSPNS 284 >gi|115951841|ref|XP_001180556.1| PREDICTED: similar to KIAA0155 [Strongylocentrotus purpuratus] Length = 1120 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 50/128 (39%), Gaps = 18/128 (14%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG-------ARFYVTVGRNQLAA- 191 + Q RD ++R + L +++ + + Y + Y+ R+ + Sbjct: 618 TLYQPTRDKEKEKRHQERALARYKQVLRSDSRNIYAANGIGCILAMKGYIREARDVFSQV 677 Query: 192 KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 +E + + Y+++ +Y++AI ++ + + H ++ L AY Sbjct: 678 REATADVSDVWLNLAHIYVEQKQYISAIQMYENCIKKFFKF-HNTTVLSFLARAYFKTGK 736 Query: 243 MDEAREVV 250 + E R+ + Sbjct: 737 LKECRQTL 744 >gi|187479239|ref|YP_787264.1| exported peptidase [Bordetella avium 197N] gi|115423826|emb|CAJ50377.1| putative exported peptidase [Bordetella avium 197N] Length = 503 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 57/154 (37%), Gaps = 23/154 (14%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-SAGKYQQAASLGEE 119 Y A + +A + S D + + + + A + + + A + Sbjct: 324 YGLAYYHFQRNELDQAQALLDAASADGRRSPMMARLAIDIAAARKDRSRQLTLAEAA--- 380 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I Q+P+++ + G++YAQ ++D + Y+ ++++ N Sbjct: 381 -IKQWPDNRAL-------GLAYAQALQDNGRN----SDAQAYLRERIKQWGNDE--PELY 426 Query: 180 FYVTVGRNQLAAKEVEI----GRYYLKRGEYVAA 209 + + + A VE R+Y+ G Y AA Sbjct: 427 QLLAQSQER-AGHPVEARRDMARFYVATGAYAAA 459 >gi|109474510|ref|XP_001075561.1| PREDICTED: transmembrane and tetratricopeptide repeat containing 1-like [Rattus norvegicus] Length = 942 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 44/151 (29%), Gaps = 27/151 (17%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A + +A ++ + +P A +L +A + Sbjct: 547 YNYANFLKDQGRNKEAIYHYKTALKLYP--RHAS-ALNNLG---TLTKDMAEAKMYYQRA 600 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +P+ + +G ++ Q T+ + + ++ + A Sbjct: 601 LQLHPQHNR---ALFNLG--------NLLKSQEKTEEAIVLLKESIKYGPD---FADAYS 646 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + LA +E R+ Y A I Sbjct: 647 SLASL---LAEQE----RFKEAEDVYQAGIK 670 >gi|109472802|ref|XP_342789.3| PREDICTED: transmembrane and tetratricopeptide repeat containing 1 isoform 2 [Rattus norvegicus] Length = 942 Score = 36.2 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 44/151 (29%), Gaps = 27/151 (17%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A + +A ++ + +P A +L +A + Sbjct: 547 YNYANFLKDQGRNKEAIYHYKTALKLYP--RHAS-ALNNLG---TLTKDMAEAKMYYQRA 600 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + +P+ + +G ++ Q T+ + + ++ + A Sbjct: 601 LQLHPQHNR---ALFNLG--------NLLKSQEKTEEAIVLLKESIKYGPD---FADAYS 646 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 + LA +E R+ Y A I Sbjct: 647 SLASL---LAEQE----RFKEAEDVYQAGIK 670 >gi|328714601|ref|XP_001947755.2| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like [Acyrthosiphon pisum] Length = 1076 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 26/45 (57%), Gaps = 3/45 (6%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 A+V Y +GK+++A S ++ + P+ N ++ +GM++ + Sbjct: 260 NLAYVYYKSGKFEKAISKYKQVLEINPDLMN---AHFYLGMTHLK 301 >gi|307245519|ref|ZP_07527606.1| UDP-N-acetylglucosamine-peptide-n- acetylglucosaminyltransferase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306853578|gb|EFM85796.1| UDP-N-acetylglucosamine-peptide-n- acetylglucosaminyltransferase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 718 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 30/179 (16%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL-----KEQNFSKAYEYFNQCSRDFPFA 90 +G + + + + EVY +A + L ++ F +A FN SR+ Sbjct: 230 LGKQGKVDEAIVAYRNVNREDSAEVYVRAQINLGITLGEQGKFDEAIAAFNNVSREDSTE 289 Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD--Y--VYYLVGMSYAQMIR 146 A + + G+ +A + ++ Y V +L+G+ + + Sbjct: 290 LYAI-AQVNLGITLRKQGRGDEAIVAY-----RNVNREDSAKLYVKVQFLLGLIFESQDK 343 Query: 147 DVPYDQRATKLMLQY--MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203 + +S VE Y A+ Y+ V + KE+ I + + R Sbjct: 344 -----LDEARDAFNNIRLSDSVELY------TKAQVYLKVLN--IGKKEIRISLFNIHR 389 >gi|301299258|ref|ZP_07205544.1| conserved hypothetical protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300853102|gb|EFK80700.1| conserved hypothetical protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 295 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 12/71 (16%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY----SAGKYQQA 113 E+Y +A K ++++KA + + K + + + Y A Sbjct: 2 SELYFQAEEAYKNKDYTKARKLLEK--------EYLEKKTFRTNYFLFLVFLKIEDYIAA 53 Query: 114 ASLGEEYITQY 124 EYI QY Sbjct: 54 YETANEYIRQY 64 >gi|227890705|ref|ZP_04008510.1| conserved hypothetical protein [Lactobacillus salivarius ATCC 11741] gi|227867643|gb|EEJ75064.1| conserved hypothetical protein [Lactobacillus salivarius ATCC 11741] Length = 295 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 12/71 (16%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY----SAGKYQQA 113 E+Y +A K ++++KA + + K + + + Y A Sbjct: 2 SELYFQAEEAYKNKDYTKARKLLEK--------EYLEKKTFRTNYFLFLVFLKIEDYIAA 53 Query: 114 ASLGEEYITQY 124 EYI QY Sbjct: 54 YETANEYIRQY 64 >gi|197117374|ref|YP_002137801.1| ABC transporter membrane protein [Geobacter bemidjiensis Bem] gi|197086734|gb|ACH38005.1| ABC transporter, membrane protein [Geobacter bemidjiensis Bem] Length = 339 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 10/78 (12%), Positives = 26/78 (33%), Gaps = 9/78 (11%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQC-----SRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 +++ A + + A + F +S + A +Q++ Sbjct: 33 DQIFSDANDAMGSGDLPAAIAILQKVKPDQGDDSGAF----VRSRMQIARLQFALKDMNA 88 Query: 113 AASLGEEYITQYPESKNV 130 A++ E + YP++ Sbjct: 89 ASASANEVLALYPDNSEA 106 >gi|61402551|gb|AAH91819.1| LOC553339 protein [Danio rerio] Length = 317 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 49/146 (33%), Gaps = 25/146 (17%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCS---RDFPFAGVARKSLLMS 100 +V S + + EK + F++E +++A F +D+ F +S Sbjct: 15 EVIGFSEAKTKRSASLVEKGIRFVQEGQYTQAVSLFTEAIKCDPKDYRF--FGNRS---- 68 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + +Y A + E+ I P+ YY G + + R + Sbjct: 69 -YCYCCLEQYALALADAEKSIQMAPDWPKG---YYRRGSALMGLKRYS--------EAEK 116 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGR 186 M ++++ + A + + Sbjct: 117 AMEQVLKLDGDCE---EAVNDLLYCK 139 >gi|110632476|ref|YP_672684.1| tetratricopeptide TPR_2 [Mesorhizobium sp. BNC1] gi|110283460|gb|ABG61519.1| Tetratricopeptide TPR_2 [Chelativorans sp. BNC1] Length = 251 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 57/180 (31%), Gaps = 27/180 (15%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 A + + FL G ++ + S V L +F K Sbjct: 4 ARSIERLLFRCMMFAGFLFLTGCSGPNTNGTSVLSQISV---------GETMLGYGDFEK 54 Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 AY + + D P + VA L A + Y +AA + ++ Sbjct: 55 AYALLDAIAADNPHSSVAA---LGLADAYFRQKAYLKAAIHYRKAADLGARMES------ 105 Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 L+G++ ++ R+ P + ++ I+ NS A + + + ++ Sbjct: 106 LLGLARVELARNNP------QGAKVFLQEILRVSPNSLEALNA---MGIAHDLEGHHDLA 156 >gi|254499265|ref|ZP_05111941.1| hypothetical protein LDG_3320 [Legionella drancourtii LLAP12] gi|254351509|gb|EET10368.1| hypothetical protein LDG_3320 [Legionella drancourtii LLAP12] Length = 98 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 3/63 (4%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS---LLMSAFVQYSAGKYQQAASLGEEY 120 A +L E N +A E + D P A + LL A + A S+ E Sbjct: 33 AQQYLAEGNLRQATEICWKLVSDHPGTVEADAAKGILLDLADSYERNDERHMARSIYEHL 92 Query: 121 ITQ 123 + Sbjct: 93 MNL 95 >gi|253741619|gb|EES98485.1| Intraflagellar transport particle protein IFT88 [Giardia intestinalis ATCC 50581] Length = 829 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 72/223 (32%), Gaps = 32/223 (14%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAF 102 R+ ++ + +Y +++ K+Q + AY F + + P + ++ MSA Sbjct: 547 REFLKAQEINMESVQAIYNAGLVYFKQQEYKTAYSCFQKVANKLPSYGD----AIYMSAD 602 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 + +A + +T + +K D Y+ + + D+ Y Sbjct: 603 CLARMSQIDEAIQMLSNLVTVFSTAKAYDPSIYIR----LGELYSIAGDEG---QAAHYF 655 Query: 163 SRIVERYT---------NSPYVK-GARFYVTVGRNQLAAKE-------VEIGRYYLKRGE 205 S Y+K V + + + + + K + Sbjct: 656 KEAHRLVPFSLAVINWLGSHYIKNELYEQARVCFEKASRVDTTTPKWSLAVAACLRKSRQ 715 Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 Y AI ++ +L + AM L+ + + EA E Sbjct: 716 YREAIYEYKHILKRFP---ANTTAMTHLISSLNNIGQHKEADE 755 >gi|188527908|ref|YP_001910595.1| hypothetical protein HPSH_05795 [Helicobacter pylori Shi470] gi|188144148|gb|ACD48565.1| hypothetical protein HPSH_05795 [Helicobacter pylori Shi470] Length = 331 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 62/145 (42%), Gaps = 19/145 (13%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVARK 95 R++ ++ D+ Q+E++++A+ FLK++++++A E R + + A Sbjct: 189 RKTQEKAKIEFDKDLSKQKEIFQEALTFLKDKSYAEARERLLWLEANSYRLY-YVRYA-- 245 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 V Y KY++A +E ++ + + + S+ ++ D Y Sbjct: 246 ----LGEVAYGEKKYREAIKYYKESALLNKKASYMPVLLWHTAWSFKKIKDDQNY----- 296 Query: 156 KLMLQYMSRIVERYTNSPYVKGARF 180 ++++ + Y +S K A+ Sbjct: 297 ---YKFLNTLQHLYPSSEQAKMAKK 318 >gi|183221154|ref|YP_001839150.1| TPR repeat-containing protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911245|ref|YP_001962800.1| serine phosphatase RsbU [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775921|gb|ABZ94222.1| Serine phosphatase RsbU, regulator of sigma subunit [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779576|gb|ABZ97874.1| Hypothetical protein with TRP repeats [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 606 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Query: 192 KEVEI--GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 KE+ + G+ Y + G+Y AI + L D A + AY ++ EA+ Sbjct: 486 KEILVFLGKMYYRDGKYKEAIRYLEEYLRTSGDNTAASH--FTMGRAYYKAGMISEAKRA 543 Query: 250 VSL 252 + + Sbjct: 544 LKM 546 >gi|88602736|ref|YP_502914.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] gi|88188198|gb|ABD41195.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] Length = 194 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 30/102 (29%), Gaps = 31/102 (30%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP----------FAGV-------ARKSLLM--- 99 +Y + + L +++A F R +P F A L M Sbjct: 53 LYYRGMCHLDAGRYAEALTDFEVLIRQYPDNIEYLFRRGFIRYKTGDIPGAISDLTMVPP 112 Query: 100 -----------SAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 + + Y G Y A E+ ++ +P V Sbjct: 113 DHPDFSIRWHYLSVLYYKTGNYDAALEAIEKALSLFPTMPKV 154 >gi|48675383|ref|NP_001001598.1| prolyl 4-hydroxylase subunit alpha-3 precursor [Bos taurus] gi|75053350|sp|Q75UG4|P4HA3_BOVIN RecName: Full=Prolyl 4-hydroxylase subunit alpha-3; Short=4-PH alpha-3; AltName: Full=Procollagen-proline,2-oxoglutarate-4-dioxygenase subunit alpha-3; Flags: Precursor gi|47115494|dbj|BAD18888.1| Collagen prolyl 4-hydroxylase alpha III subunit [Bos taurus] gi|296479828|gb|DAA21943.1| prolyl 4-hydroxylase subunit alpha-3 precursor [Bos taurus] Length = 544 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 11/81 (13%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQ 111 ++ + ++ A + + F + +L AF + AG Sbjct: 185 FQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFQAGNVL 244 Query: 112 QAASLGEEYITQY-PESKNVD 131 A +L E++ Y P++K V Sbjct: 245 CALNLSREFL-LYSPDNKRVA 264 >gi|86140915|ref|ZP_01059474.1| TPR repeat protein [Leeuwenhoekiella blandensis MED217] gi|85832857|gb|EAQ51306.1| TPR repeat protein [Leeuwenhoekiella blandensis MED217] Length = 254 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 46/131 (35%), Gaps = 13/131 (9%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + + KA E + + +L A + YS GK+++ + Y Sbjct: 98 DRGLSKMHAGYLEKAKEDYYYVVHKNNNNAMMEAALYWLARIHYSQGKFEEVLKNCDRYF 157 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 T + + Y++ G + + R + ++ S +E + N YV+ Sbjct: 158 TINSQDPEM---YFISGTANDML--------RNFEKAIKDYSNAIEIHPN--YVQAIANR 204 Query: 182 VTVGRNQLAAK 192 T N L Sbjct: 205 GTAKINLLTRN 215 >gi|229511278|ref|ZP_04400757.1| GGDEF family protein [Vibrio cholerae B33] gi|229351243|gb|EEO16184.1| GGDEF family protein [Vibrio cholerae B33] Length = 640 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100 D+ L + D +Y L + + A +Y N+ + + Sbjct: 188 DLLLCLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNPLLIAQVEHSL 247 Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + G+Y+++ E+ + P + + YV+ +G +Y ++ V DQ Sbjct: 248 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 305 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L+Y++ + + LA + K +Y AI Sbjct: 306 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 347 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A S++ +AY+ LA + EA + Sbjct: 348 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 375 >gi|224111122|ref|XP_002315755.1| predicted protein [Populus trichocarpa] gi|222864795|gb|EEF01926.1| predicted protein [Populus trichocarpa] Length = 334 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 47/153 (30%), Gaps = 28/153 (18%) Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VAR 94 G S++ ++V+ + + +K F K N+ KA + Q + P + Sbjct: 7 GSATTGSKE------SNVKEEISLKDKGNEFFKAGNYLKAAALYTQAIKLDPSNPTLYSN 60 Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG--MSYAQMIRDVPYDQ 152 ++ K +A + E I P+ + Y+ G + + D Sbjct: 61 RAA-----AFLQLVKLNKALADAETTIKLNPQWEKG---YFRKGCVLEGMERYDD----- 107 Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185 L ++ S V ++ Sbjct: 108 -----ALATFQIALQHNPQSTEVSRKIKRISQL 135 >gi|254503656|ref|ZP_05115807.1| tetratricopeptide repeat domain protein [Labrenzia alexandrii DFL-11] gi|222439727|gb|EEE46406.1| tetratricopeptide repeat domain protein [Labrenzia alexandrii DFL-11] Length = 277 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 36/121 (29%), Gaps = 23/121 (19%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + + + + A E FN+ + P F A ++L+ G+ A S Sbjct: 66 TRGIAYGQAGKLDNAIEDFNRALQLNPQSFQTYANRALV-----YRRMGQNDLAISDYTR 120 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 I P + D Y G Y Q L + ++ S AR Sbjct: 121 AINIKP---DYDVAYVGRGNIY--------RQQGNFTAALNDFNSVI-----SRDSSDAR 164 Query: 180 F 180 Sbjct: 165 A 165 >gi|254526134|ref|ZP_05138186.1| hypothetical protein P9202_786 [Prochlorococcus marinus str. MIT 9202] gi|221537558|gb|EEE40011.1| hypothetical protein P9202_786 [Prochlorococcus marinus str. MIT 9202] Length = 275 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 28/210 (13%), Positives = 53/210 (25%), Gaps = 74/210 (35%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--------------------- 91 D +Y+ +Y V +N+ A E F + P Sbjct: 25 DPKYEEVLYLSGVTKNCIKNYKGAIEDFTKLIAINPKTEDVFKNRGIAKDELGDFKGAIE 84 Query: 92 -VARKSLLM---------SAFVQYSAGKYQQAASLGEEYITQYPESKNV----------- 130 + +Y Y+ A + I P+S Sbjct: 85 DYTSAIEINPEDHLNFFFRGNTKYKLNNYEDALEDLTKTIELNPKSSLALYDRAGIKKIL 144 Query: 131 --------DY------------VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 DY Y+ G D+ D ++ S+++ Sbjct: 145 NDNKGAIQDYTSAIEINPTFANAYFKRG--------DLSSDLEDYASAIEDFSKVIVIDP 196 Query: 171 NSP----YVKGARFYVTVGRNQLAAKEVEI 196 N Y A++ + ++ +A E+ I Sbjct: 197 NYQNIYFYRGNAKYNLDDNKSAIADYEIAI 226 >gi|195330292|ref|XP_002031838.1| GM23832 [Drosophila sechellia] gi|194120781|gb|EDW42824.1| GM23832 [Drosophila sechellia] Length = 520 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 39/140 (27%), Gaps = 25/140 (17%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110 D + + LK + FSKA + + + P + A +SL + Sbjct: 45 DFAAAEQYKNQGNEMLKTKEFSKAIDMYTKAIELHPNSAIYYANRSL-----AHLRQESF 99 Query: 111 QQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 A G + P Y+ YY ++ + K L + + Sbjct: 100 GFALQDGVSAVKADP-----AYLKGYYRRAAAHMSL--------GKFKQALCDFEFVAKC 146 Query: 169 YTNSPYVKGARFYVTVGRNQ 188 N A+ T Sbjct: 147 RPNDK---DAKLKFTECNKI 163 >gi|218245032|ref|YP_002370403.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 8801] gi|257058056|ref|YP_003135944.1| hypotheticalprotein [Cyanothece sp. PCC 8802] gi|218165510|gb|ACK64247.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801] gi|256588222|gb|ACU99108.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802] Length = 156 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 31/71 (43%), Gaps = 7/71 (9%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASL 116 E+ ++A L+ KA + + + +P FA R+++L ++ +Y+++ Sbjct: 42 ELLKRAQFLLESGEVEKAEKLLTKTIKSYPDFAEAWNRRAVL-----YFTQEQYEKSKGD 96 Query: 117 GEEYITQYPES 127 E + P Sbjct: 97 CERVVQLVPYH 107 >gi|149714380|ref|XP_001489780.1| PREDICTED: similar to RNA polymerase II-associated protein 3 [Equus caballus] Length = 664 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 44/141 (31%), Gaps = 17/141 (12%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + + EK + K+ + +A E + + P+ V A + K+ Sbjct: 129 DSQKALALKEKGNKYFKQGKYDEAIECYTKGMDADPYNPVLPT---NRASAYFRMKKFAV 185 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A S I S Y G + + + + + +++E N+ Sbjct: 186 AESDCNLAIALN-RSYTKAYA--RRGAARFALQK--------LEDAKKDYEKVLELEPNN 234 Query: 173 PYVKGARFYVTVGRNQLAAKE 193 A + L +KE Sbjct: 235 ---FEATNELRKINQALTSKE 252 >gi|119595342|gb|EAW74936.1| procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide III, isoform CRA_c [Homo sapiens] Length = 260 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 9/80 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVA-------RKSLLMSAFVQYSAGKYQ 111 ++ + ++ A + + F + +L AF + AG Sbjct: 45 FQVGKVAYDMGDYYHAIPWLEEAVSLFRGSYGEWKTEDEASLEDALDHLAFAYFRAGNVS 104 Query: 112 QAASLGEEYITQYPESKNVD 131 A SL E++ P++K + Sbjct: 105 CALSLSREFLLYSPDNKRMA 124 >gi|118091912|ref|XP_421249.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 1632 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 14/102 (13%), Positives = 36/102 (35%), Gaps = 10/102 (9%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + +L+++ +++ A E F + P ++ Y ++++A + + Sbjct: 1293 NRGLLYMELGDYANACEDFKEAVLLSPGDSQIFQA---IGTCHYRLNEFEEAVRSFNQAL 1349 Query: 122 TQYPESKNVDYVYYL-VGMSYAQ--MIRDVPYDQRATKLMLQ 160 P S Y+ G SY + + Q+ + Sbjct: 1350 RLEPISVEA----YIGRGNSYMKHGQEAGLEQAQKDFLKAIH 1387 >gi|19552441|ref|NP_600443.1| thioredoxin domain-containing protein [Corynebacterium glutamicum ATCC 13032] gi|62390107|ref|YP_225509.1| thioredoxin [Corynebacterium glutamicum ATCC 13032] gi|21323986|dbj|BAB98612.1| Thioredoxin domain-containing protein [Corynebacterium glutamicum ATCC 13032] gi|41325443|emb|CAF19923.1| PUTATIVE THIOREDOXIN [Corynebacterium glutamicum ATCC 13032] Length = 307 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 8/63 (12%), Positives = 18/63 (28%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 + G + D + ++ A L F +A + P A Sbjct: 147 AVGGQLEGLPEEATDGEQEDAPVEDPRFDAATDALNRGAFDEAIAVYESILAQEPNNADA 206 Query: 94 RKS 96 +++ Sbjct: 207 KQA 209 >gi|17933746|ref|NP_524946.1| protein phosphatase D3, isoform A [Drosophila melanogaster] gi|24645490|ref|NP_731398.1| protein phosphatase D3, isoform B [Drosophila melanogaster] gi|7299242|gb|AAF54438.1| protein phosphatase D3, isoform A [Drosophila melanogaster] gi|9501238|emb|CAB99478.1| protein phosphatase 5 [Drosophila melanogaster] gi|16182816|gb|AAL13585.1| GH12714p [Drosophila melanogaster] gi|23170843|gb|AAN13442.1| protein phosphatase D3, isoform B [Drosophila melanogaster] gi|220954960|gb|ACL90023.1| PpD3-PA [synthetic construct] Length = 520 Score = 36.2 bits (83), Expect = 4.5, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 39/140 (27%), Gaps = 25/140 (17%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKY 110 D + + LK + FSKA + + + P + A +SL + Sbjct: 45 DFAAAEQYKNQGNEMLKTKEFSKAIDMYTKAIELHPNSAIYYANRSL-----AHLRQESF 99 Query: 111 QQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 A G + P Y+ YY ++ + K L + + Sbjct: 100 GFALQDGVSAVKADP-----AYLKGYYRRAAAHMSL--------GKFKQALCDFEFVAKC 146 Query: 169 YTNSPYVKGARFYVTVGRNQ 188 N A+ T Sbjct: 147 RPNDK---DAKLKFTECNKI 163 >gi|326912625|ref|XP_003202649.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4-like [Meleagris gallopavo] Length = 442 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 15/147 (10%), Positives = 44/147 (29%), Gaps = 31/147 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRD--FPFA------------GVARKSLLMSAFVQYSA 107 E+ + KE + +A + + +A + L A Sbjct: 268 ERGTQYFKEGKYKRAALQYKKIVSWLEHESGLSNEEDTKARSLRLA--AHLNLAMCHLKL 325 Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 +Y QA + + ++ + G ++ + +L ++++ Sbjct: 326 KEYSQALENCNKALELDSSNEKG---LFRRGEAHLAVND--------FELARGDFQKVIQ 374 Query: 168 RYTNSPYVKGARFYVTVGRNQL-AAKE 193 Y ++ A+ + + ++ E Sbjct: 375 LYPSNK---AAKVQLVTCQQKIREQHE 398 >gi|322613991|gb|EFY10927.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322625502|gb|EFY22328.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629967|gb|EFY26740.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632144|gb|EFY28895.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636506|gb|EFY33213.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643140|gb|EFY39714.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644639|gb|EFY41175.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651337|gb|EFY47721.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652747|gb|EFY49086.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659048|gb|EFY55300.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663250|gb|EFY59454.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668736|gb|EFY64889.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674460|gb|EFY70553.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678333|gb|EFY74394.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682409|gb|EFY78430.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684123|gb|EFY80129.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192321|gb|EFZ77553.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196251|gb|EFZ81403.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201399|gb|EFZ86465.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206491|gb|EFZ91452.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212083|gb|EFZ96910.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216988|gb|EGA01711.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220353|gb|EGA04807.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224400|gb|EGA08689.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228330|gb|EGA12461.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233403|gb|EGA17496.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237136|gb|EGA21203.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243649|gb|EGA27665.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246107|gb|EGA30094.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250887|gb|EGA34765.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257620|gb|EGA41306.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261827|gb|EGA45394.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266116|gb|EGA49607.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268660|gb|EGA52127.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 1180 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 466 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 522 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 523 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 569 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 570 AALAHLNTL----PTSQW 583 >gi|315634579|ref|ZP_07889863.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393] gi|315476527|gb|EFU67275.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393] Length = 183 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 R+++ +A +++ +A + F R+ A ++ L A + G+ ++A Sbjct: 4 DEARQLFSQAKKLYQDEKLDEAIDIFQSIKREDSPETFA-RAQLNLALIWRKKGEQEKAI 62 Query: 115 SLGE 118 ++ E Sbjct: 63 AIYE 66 >gi|260060544|gb|ACX30004.1| transmembrane and tetratricopeptide repeat containing 1A [Homo sapiens] Length = 882 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 52/155 (33%), Gaps = 30/155 (19%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP-YDQRAT 155 LL + + + +A ++ + P+ V +S + +Q Sbjct: 756 LLSAIYS--KQENHDKALDAIDKALQLKPKDPKV--------ISELFFTKGNQLREQNLL 805 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVG-RNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 + V+ + A+ ++ +G + +G+YV+A ++ Sbjct: 806 DKAFESYRVAVQLNPD-----QAQAWMNMGGIQHI-------------KGKYVSARAYYE 847 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 L D++ +E +A+L L + E + Sbjct: 848 RALQLVPDSKLLKENLAKLDRLEKRLQEVREKDQT 882 >gi|239610445|gb|EEQ87432.1| transcriptional corepressor Cyc8 [Ajellomyces dermatitidis ER-3] gi|327349127|gb|EGE77984.1| transcriptional corepressor Cyc8 [Ajellomyces dermatitidis ATCC 18188] Length = 984 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 44/143 (30%), Gaps = 22/143 (15%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108 D + Y ++ + + KAYE + Q P + Y Sbjct: 331 ADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 384 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y+ A I P + V+Y +G + + + D L R + Sbjct: 385 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQTND------ALDAYRRAADL 434 Query: 169 YTNSPYVKGARFYVTVGRNQLAA 191 + ++ + + + ++ A Sbjct: 435 DPTNAHI---KSRLQLLQSGQAG 454 >gi|261195576|ref|XP_002624192.1| transcriptional corepressor Cyc8 [Ajellomyces dermatitidis SLH14081] gi|239588064|gb|EEQ70707.1| transcriptional corepressor Cyc8 [Ajellomyces dermatitidis SLH14081] Length = 983 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 44/143 (30%), Gaps = 22/143 (15%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108 D + Y ++ + + KAYE + Q P + Y Sbjct: 330 ADNSDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 383 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +Y+ A I P + V+Y +G + + + D L R + Sbjct: 384 QYRDALDAYSRAIRLNP---YISEVWYDLG-TLYESCNNQTND------ALDAYRRAADL 433 Query: 169 YTNSPYVKGARFYVTVGRNQLAA 191 + ++ + + + ++ A Sbjct: 434 DPTNAHI---KSRLQLLQSGQAG 453 >gi|229017513|ref|ZP_04174414.1| TPR repeat-containing protein [Bacillus cereus AH1273] gi|229023732|ref|ZP_04180221.1| TPR repeat-containing protein [Bacillus cereus AH1272] gi|228737529|gb|EEL88036.1| TPR repeat-containing protein [Bacillus cereus AH1272] gi|228743837|gb|EEL93938.1| TPR repeat-containing protein [Bacillus cereus AH1273] Length = 891 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 55/159 (34%), Gaps = 19/159 (11%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102 + D D Y A + + +A + F Q + + ++ A Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQY 161 ++++A + + T+ +++ V YL G +S A V D + Sbjct: 651 SHMKMEEFEKAEDVIVKMSTK--TNEDKAIVSYLKGQLSTA----TVQLD-----KAESF 699 Query: 162 MSRIVERYT-NSPYVKG-ARFYVTVGRNQL---AAKEVE 195 +++ + N+ Y + YV + L A KE+ Sbjct: 700 FKEAIKQDSKNAIYTIELSNLYVLWNKTNLIDSAKKEMN 738 >gi|238496501|ref|XP_002379486.1| transcriptional corepressor Cyc8, putative [Aspergillus flavus NRRL3357] gi|220694366|gb|EED50710.1| transcriptional corepressor Cyc8, putative [Aspergillus flavus NRRL3357] Length = 869 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 45/146 (30%), Gaps = 28/146 (19%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108 D + Y ++ + + KAYE + Q P + Y Sbjct: 297 ADNTDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 350 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRI 165 +Y+ A I P + V+Y +G Y I D L R Sbjct: 351 QYRDALDAYSRAIRLNP---YISEVWYDLGTLYESCNNQISD----------ALDAYGRA 397 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAA 191 + + ++ + + + ++QL+ Sbjct: 398 ADLDPTNVHI---KARLQLLQSQLSG 420 >gi|226500876|ref|NP_001149790.1| LOC100283417 [Zea mays] gi|195634685|gb|ACG36811.1| peptidyl-prolyl isomerase [Zea mays] Length = 553 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 55/151 (36%), Gaps = 26/151 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ----CSRDFPFAG-VARKSL-------LMSAFVQYSAGK 109 E+ K +++A + + + D F+ ++S L +A + Sbjct: 408 EEGNALFKSGKYARASKRYEKAAKYIEYDTSFSEDEKKQSKQLKISCNLNNAACKLKLKD 467 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 Y++AA L + + +S+NV Y +Y Q+ +L + + +E Sbjct: 468 YKEAAKLCTKVLEL--DSQNVK-ALYRRVQAYIQLAD--------LELAEADIKKALEID 516 Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 ++ + + + ++ + ++Y Sbjct: 517 PDNR---DVKLEYKILKEKIKEYNKKDAKFY 544 >gi|204928563|ref|ZP_03219762.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321996|gb|EDZ07194.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 1172 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 458 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 514 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 515 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 561 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 562 AALAHLNTL----PTSQW 575 >gi|198241977|ref|YP_002217576.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197936493|gb|ACH73826.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 1180 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 466 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 522 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 523 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 569 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 570 AALAHLNTL----PTSQW 583 >gi|226530716|ref|NP_001141458.1| hypothetical protein LOC100273568 [Zea mays] gi|300797999|ref|NP_001178792.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Rattus norvegicus] gi|293347093|ref|XP_001066628.2| PREDICTED: FK506 binding protein 4 [Rattus norvegicus] gi|261260096|sp|Q9QVC8|FKBP4_RAT RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP4; Short=PPIase FKBP4; AltName: Full=52 kDa FK506-binding protein; Short=52 kDa FKBP; Short=FKBP-52; AltName: Full=59 kDa immunophilin; Short=p59; AltName: Full=FK506-binding protein 4; Short=FKBP-4; AltName: Full=FKBP59; AltName: Full=HSP-binding immunophilin; Short=HBI; AltName: Full=Immunophilin FKBP52; AltName: Full=Rotamase; Contains: RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed gi|149049321|gb|EDM01775.1| FK506 binding protein 4 [Rattus norvegicus] gi|194704654|gb|ACF86411.1| unknown [Zea mays] Length = 458 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 35/84 (41%), Gaps = 2/84 (2%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFS 74 +++ L ++A+C L ++ + ++ D ++ ++ + L +F Sbjct: 311 MQKVHALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFD 370 Query: 75 KAYEYFNQCSRDFPFAGVARKSLL 98 A F + + +P + A K+ L Sbjct: 371 LARADFQKVLQLYP-SNKAAKTQL 393 Score = 35.1 bits (80), Expect = 9.8, Method: Composition-based stats. Identities = 18/146 (12%), Positives = 44/146 (30%), Gaps = 30/146 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARK-------SLLMSAFVQYSAGK 109 E+ ++ KE + +A + + + +K S L A Sbjct: 275 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSGEEMQKVHALRLASHLNLAMCHLKLQA 334 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + D ++++ Y Sbjct: 335 FSAAIESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 383 Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191 ++ A+ + V R QLA Sbjct: 384 PSNK---AAKTQLAVCQQRTRRQLAR 406 >gi|126724804|ref|ZP_01740647.1| Peptidoglycan-binding domain 1 [Rhodobacterales bacterium HTCC2150] gi|126705968|gb|EBA05058.1| Peptidoglycan-binding domain 1 [Rhodobacterales bacterium HTCC2150] Length = 546 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 12/79 (15%) Query: 162 MSRIVERYTNSPYVKGARFYVTVG----RNQLAAKEVEIGRYYLKRGEYVAAIP--RFQL 215 + ++RY + + A ++ R+++A +E I + +AA + Sbjct: 391 LRSYLKRYPDGAFSDVANERLSAILQEKRDRVAKRERSIWD------QTLAANNLVSYNQ 444 Query: 216 VLANYSDAEHAEEAMARLV 234 L + + EEA +R+ Sbjct: 445 YLNEFPNGSFVEEAKSRIA 463 >gi|145491839|ref|XP_001431918.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124399025|emb|CAK64520.1| unnamed protein product [Paramecium tetraurelia] Length = 181 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 40/126 (31%), Gaps = 23/126 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 KA L +++A + F Q R + K+ Y +A ++ I Sbjct: 23 NKAKEALDS--YNQAIQRFPQDERIY-----GAKAQ-----ALRLQKNYDEALKYFDKAI 70 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 PE+ S+ D D + L+Y + + + + + GA+ Sbjct: 71 QMNPENP-----------SFYAGKGDTLRDLNRYQDCLKYFDQAIHYHPENSFYYGAKGR 119 Query: 182 VTVGRN 187 + Sbjct: 120 TYLIIK 125 >gi|51245807|ref|YP_065691.1| hypothetical protein DP1955 [Desulfotalea psychrophila LSv54] gi|50876844|emb|CAG36684.1| hypothetical protein DP1955 [Desulfotalea psychrophila LSv54] Length = 549 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 34/125 (27%), Gaps = 24/125 (19%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYF------ 80 F A DV Y +Y K +++A E Sbjct: 406 FVAAGNAEAALIHFDKALTLKPEAEDVPY---IYSYKGCCLRDLGRYAEAIEALQEGLLF 462 Query: 81 -NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139 + + +Y+ A S + I P S +DY VG+ Sbjct: 463 DEERPDLHNT----------LGVCFFKLEQYETAISSFKRAIELNPAS-GIDYAN--VGV 509 Query: 140 SYAQM 144 +Y ++ Sbjct: 510 NYMRL 514 >gi|326434846|gb|EGD80416.1| hypothetical protein PTSG_11061 [Salpingoeca sp. ATCC 50818] Length = 850 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 29/220 (13%), Positives = 65/220 (29%), Gaps = 35/220 (15%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D ++ ++ N A EYF++ + P + A + Q Sbjct: 522 DSSCSEALFNLGLVHRDLGNLEDALEYFHRVNLLVPDTPEVVAA---IAALNEQLDDTDQ 578 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-- 170 A I+ P N +++ + D D+ QY + Sbjct: 579 ACEWYNTLISLVPSDPN--------ALAHLGDMFDRLDDKS---QAFQYHFEGFRYFPAE 627 Query: 171 ------------NSPYVKGAR---FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 +S Y++ A + + I + K G Y A+ ++ Sbjct: 628 INTISWFGSYYIDSQYIQKAIQFFQRAVEIQPGEVKWRLMIASCHRKTGNYQRALETYKR 687 Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 + + + E + L+ + L E ++ +++ Sbjct: 688 IHTLFPE---NIECLKFLIRLCTDMGLP-EVQDYAVALKK 723 >gi|302810034|ref|XP_002986709.1| hypothetical protein SELMODRAFT_182535 [Selaginella moellendorffii] gi|302818096|ref|XP_002990722.1| hypothetical protein SELMODRAFT_185525 [Selaginella moellendorffii] gi|300141460|gb|EFJ08171.1| hypothetical protein SELMODRAFT_185525 [Selaginella moellendorffii] gi|300145597|gb|EFJ12272.1| hypothetical protein SELMODRAFT_182535 [Selaginella moellendorffii] Length = 482 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 43/139 (30%), Gaps = 27/139 (19%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 ++ E+A + FS A E + + P A ++ F +Y Sbjct: 9 EAEQLKEQANAAFQACKFSHARELYTRAIELDGSNPV-YWANRA-----FTNVKLEEYGT 62 Query: 113 AASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + I + YV YY G +Y + K L+ + ++ + Sbjct: 63 AIMDATKAIEL-----DRKYVKGYYRRGAAYLAL--------GKFKEGLKDLRQVCKIVP 109 Query: 171 NSPYVKGARFYVTVGRNQL 189 P A + N + Sbjct: 110 KDP---DAMRKIRECENAI 125 >gi|269836528|ref|YP_003318756.1| ATPase AAA-2 domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269785791|gb|ACZ37934.1| ATPase AAA-2 domain protein [Sphaerobacter thermophilus DSM 20745] Length = 817 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 6/75 (8%) Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV---ALALMDEAREVVSLIQER 256 Y++R A RFQ V E E + + E Y L + DEA +++ R Sbjct: 322 YIERDA--ALERRFQPVQVEEPTVEETIEILRGIRERYEEHHKLKITDEALRSAAVLASR 379 Query: 257 Y-PQGYWARYVETLV 270 Y P + LV Sbjct: 380 YVPDRFLPDKAIDLV 394 >gi|205356887|ref|ZP_02342915.2| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205325790|gb|EDZ13629.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 1180 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 466 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 522 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 523 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 569 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 570 AALAHLNTL----PTSQW 583 >gi|195873799|ref|ZP_02698986.2| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195632376|gb|EDX50860.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 1180 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 466 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 522 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 523 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 569 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 570 AALAHLNTL----PTSQW 583 >gi|161936207|ref|YP_152593.2| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 1180 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 466 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 522 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 523 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 569 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 570 AALAHLNTL----PTSQW 583 >gi|119952992|ref|YP_945201.1| tetratricopeptide repeat family protein [Borrelia turicatae 91E135] gi|119861763|gb|AAX17531.1| tetratricopeptide repeat family protein [Borrelia turicatae 91E135] Length = 380 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 71/212 (33%), Gaps = 36/212 (16%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 K++NF KA Y+ +C +L S G Y++A + EEY+ PE+ Sbjct: 70 KKRNFDKAIIYYQKCLAKHSNNNY---ALFGLGDCYRSLGDYKKATDVWEEYLKYDPEN- 125 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180 ++ + + + Q R++E ++ Y + Sbjct: 126 ----------ITVLTRVASSYRKLKNFQKSRQSYLRVLEFVPDNDYALVGIGHLYYDFKE 175 Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 Y + L E+ IG Y K E+ I F+ L + + A Sbjct: 176 YKEALKYWLRMYEINQVKIDVRVLTSIGNCYRKLKEFSKGIYFFKRALEI---SPNNFYA 232 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + L + Y EA + I ++ P+ Sbjct: 233 IFGLADCYRGSKEYHEALKYWLTIIDKDPKNN 264 >gi|88603564|ref|YP_503742.1| TPR repeat-containing protein [Methanospirillum hungatei JF-1] gi|88189026|gb|ABD42023.1| TPR repeat [Methanospirillum hungatei JF-1] Length = 245 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 38/112 (33%), Gaps = 28/112 (25%) Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 K++ A E+ P + + Y+ G+++ +IR + ++ + Sbjct: 23 NQKFEDAIHYFEKASALNPVDEEI---YFQKGLAFMNLIR--------YQEAVEAFEEAL 71 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218 + ++ + +G Y G Y AIP F +VL Sbjct: 72 K-----------------LNDKDPRYWLYMGINYFFMGRYSKAIPCFNMVLE 106 >gi|73670401|ref|YP_306416.1| hypothetical protein Mbar_A2941 [Methanosarcina barkeri str. Fusaro] gi|72397563|gb|AAZ71836.1| hypothetical protein Mbar_A2941 [Methanosarcina barkeri str. Fusaro] Length = 560 Score = 36.2 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 25/85 (29%), Gaps = 9/85 (10%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 K + +A + +++ P A Y G+Y +A ++ I Sbjct: 467 KGNALYGLGRYDEALQAYDKAIAINPNYAYAWNGK---GNALYRLGRYDEALQAYDKAIA 523 Query: 123 QYPESKNV----DYVYYLVGMSYAQ 143 P + Y G+S Sbjct: 524 INPNYADAWNGKGNALY--GLSRYD 546 >gi|326693737|ref|ZP_08230742.1| hypothetical protein LargK3_08531 [Leuconostoc argentinum KCTC 3773] Length = 309 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 12/79 (15%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGK 109 +++ +A +K++N+ A E + + + + Sbjct: 8 TPEMQQLMARAQTEMKQENWHDAAETLIAV--------YEALATFEINYRLVTALFMDEQ 59 Query: 110 YQQAASLGEEYITQYPESK 128 YQ AAS ++++ Y ES+ Sbjct: 60 YQLAASYADDFLLNYLESE 78 >gi|320088037|emb|CBY97799.1| Cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 1180 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 466 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 522 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 523 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 569 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 570 AALAHLNTL----PTSQW 583 >gi|319899204|ref|YP_004159297.1| Tetratricopeptide repeat protein [Bartonella clarridgeiae 73] gi|319403168|emb|CBI76727.1| Tetratricopeptide repeat protein [Bartonella clarridgeiae 73] Length = 561 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 23/207 (11%), Positives = 61/207 (29%), Gaps = 37/207 (17%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-------QQA 113 ++ A+ + N +A + + FP + A + + QA Sbjct: 345 FQLALTLAENGNHDEAIKLLTLLEKKFPNDRH---IFITLAAIYMQKNNFSEAIKILDQA 401 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR--------- 164 + ++ ++Y G++ ++ P + + L + Sbjct: 402 IAQITDFQRDNWR------LFYQRGIA-FNYLKQWPKAETDFRKALTFFPDQPQVLNYLA 454 Query: 165 --IVERYTNSPYVKGARFYVTVGRNQLAAKEV---EIGRYYLKRGEYVAAIPRFQLVLAN 219 +++R ++ + + + +G Y K +Y A+ + + Sbjct: 455 YSLIDRD---QKLEESLNMLKKAVTLQSQNSYILDSLGWAYYKLKQYSQAVTTLETAVRL 511 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEA 246 + L +AY + EA Sbjct: 512 QPSDPTLND---HLGDAYWQVGRKREA 535 >gi|311253794|ref|XP_003125662.1| PREDICTED: aspartyl/asparaginyl beta-hydroxylase-like [Sus scrofa] Length = 430 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 17/73 (23%) Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215 + L +V RY SP GAR+ + LA K +R + + Sbjct: 30 EEALNAFEELVRRYPKSP---GARYGKAQCEDDLAEK---------RRSNEI-----LRR 72 Query: 216 VLANYSDAEHAEE 228 + Y +A + Sbjct: 73 AIQTYQEAASLPD 85 >gi|284111524|ref|ZP_06386539.1| hypothetical protein POR_1143 [Candidatus Poribacteria sp. WGA-A3] gi|283829741|gb|EFC34057.1| hypothetical protein POR_1143 [Candidatus Poribacteria sp. WGA-A3] Length = 224 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 42/98 (42%), Gaps = 7/98 (7%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 TI S+ V L +S V +S+ +V+ +A ++L ++ +A E Sbjct: 19 TIHLSLLVLCLGWCLTGTSVSVAENSIQNVQPPL---ARAKVYLAAGDYRRAVEACQMNI 75 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 P + +S + +V ++ Y ++ + +E++ Sbjct: 76 DQSP----SVESYVYLIYVYHALDGYLESLAERDEWVK 109 >gi|262382113|ref|ZP_06075251.1| TPR repeat-containing protein [Bacteroides sp. 2_1_33B] gi|262297290|gb|EEY85220.1| TPR repeat-containing protein [Bacteroides sp. 2_1_33B] Length = 707 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 71/225 (31%), Gaps = 52/225 (23%) Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCS 84 + ++AV F+ + + + D +T Y + ++L++ + KA +N+ Sbjct: 127 MLVNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAI 186 Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQ 143 P+ A + A + Y Y+ A + E + YY+ G+ Q Sbjct: 187 EMDPY--YAP-AYGNRAILHYQMDDYKDALADLNEALRLDTRESG----YYINRGLVRYQ 239 Query: 144 MIR----DVPYDQ----------------------RATKLMLQYMSRIVERYTNSPYVKG 177 M YDQ ++ ++++ ++ Sbjct: 240 MNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQQEPDN----- 294 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222 Y+ L E G+Y A+ + +VL Y Sbjct: 295 ---YMAYYNRALLRFE---------TGDYWGAVQDYDVVLKQYPT 327 >gi|257456228|ref|ZP_05621425.1| TPR domain protein [Treponema vincentii ATCC 35580] gi|257446314|gb|EEV21360.1| TPR domain protein [Treponema vincentii ATCC 35580] Length = 1124 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 70/230 (30%), Gaps = 48/230 (20%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 + V + + R + ++ + NF++A FN+ + P Sbjct: 643 KKVQAELLAKKREVDTLVQQGKKAAETGNFAEAQRAFNKAAAQMPDG-----------DA 691 Query: 104 QYSAGKYQQAASLGEEYITQYPESKN---VDYVYYLV---------GMSY--AQMIRDVP 149 ++A +Y++ A + + + P K D Y+ S+ I D Sbjct: 692 VFAAEQYREMADVLQGFAKTAPTHKEQSLKDAADYIKKSIASKNDDAKSHYIYAQIADS- 750 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209 Q T L +Q + + A E+GR Y ++ +Y A Sbjct: 751 --QNNTALTVQELEAARRFDPQN-----------------AQYNYELGRKYFEQKKYPQA 791 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 F+ + + E A L + + D A S P Sbjct: 792 RSCFEQAVKSNPQFEA---AFFNLGITHKIMNANDAALTAFSKAAALKPD 838 >gi|205354768|ref|YP_002228569.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205274549|emb|CAR39597.1| putative polysaccharide biosynthesis protein subunit C [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326629909|gb|EGE36252.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 1161 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 466 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 522 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 523 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 569 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 570 AALAHLNTL----PTSQW 583 >gi|254410828|ref|ZP_05024606.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] gi|196182183|gb|EDX77169.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] Length = 369 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 37/122 (30%), Gaps = 21/122 (17%) Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81 ++F + L S + + + RE+ +A + N+ +A Sbjct: 8 LVSSLFITGLTITLTPVAHASQPQLVSQLQPEQQRLRELLRQARDLVDAGNYPQAIA--- 64 Query: 82 QCSRDFPFAGVARKSLLM---------SAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132 + + L ++Q G +++AA ++ I P + Y Sbjct: 65 ---------TYQQAANLDRDNAKIFSGIGYLQARQGNFREAARAYQQAIALEPNNAEFQY 115 Query: 133 VY 134 Sbjct: 116 AL 117 >gi|146093351|ref|XP_001466787.1| hypothetical protein [Leishmania infantum] gi|134071150|emb|CAM69835.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 873 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 12/110 (10%), Positives = 34/110 (30%), Gaps = 5/110 (4%) Query: 9 ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68 + + + + + + G ++ L VR + Y + + + Sbjct: 31 LEEAAKSEHNVNELLSIHCLRATLAAMKGSMDVTAITAQLAPGEPVRVPVQSYLEGIAAM 90 Query: 69 KEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + + A R F +++ A V Y +Y+++ + Sbjct: 91 ARGDLTTARRRLETAVERCEGFGA----AMVCLAAVYYLTSQYEKSYAQY 136 >gi|124003389|ref|ZP_01688239.1| TPR repeat, putative [Microscilla marina ATCC 23134] gi|123991487|gb|EAY30918.1| TPR repeat, putative [Microscilla marina ATCC 23134] Length = 318 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 84/248 (33%), Gaps = 52/248 (20%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + K + F + V + S D + + ++ K + LK+Q + +A Sbjct: 2 NIQKKLCNLLFGVVVATTFCACQSSKYDQGMVN---------LFLKGNVNLKKQQYKQAI 52 Query: 78 EYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136 Y+ RD F+ + ++ G Y +A + I +S +D YY Sbjct: 53 YYYTEGIKRDSSFSEIYN----NLGIALFNMGNYSRAIHHYNKAIAL--DSVLMD-AYYN 105 Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--KGARFYVTVGRNQLAAKEV 194 + L + +V +Y +S YV + A Y+ + R A K++ Sbjct: 106 RANARFASDDLSG--------ALADYNVVVAQYQDSSYVFFRRATTYMQLKRYDDAIKDL 157 Query: 195 E--IG-----------RYY--LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + IG R Y K +Y AA Q + R AY Sbjct: 158 DKVIGLEPNNSDALGSRGYLLYKVKKYEAAAKDLQKAIELNK----------RQDLAYAN 207 Query: 240 LALMDEAR 247 L L+ A+ Sbjct: 208 LGLVKAAQ 215 >gi|1915960|emb|CAA68913.1| peptidylprolyl isomerase [Triticum aestivum] Length = 568 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 64/178 (35%), Gaps = 26/178 (14%) Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ----CSRDFPFA 90 LV +E++ + + E ++ + K ++KA + + + D F+ Sbjct: 377 LVSFEKEKESWDLKSNSEKIEAASEKKDEGNAWFKMGKYAKASKRYEKAAKYIEYDSSFS 436 Query: 91 GVARK--------SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 +K L +A + Y++A + + + ES NV Y +Y Sbjct: 437 EDEKKQSKAVKISIKLNNAACKLKLKDYKEAEKICSKVLEL--ESTNVK-ALYRRAQAYT 493 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 +++ +L + + +E ++ VK A +++L ++Y Sbjct: 494 ELVD--------LELAELDIKKALEIDPDNREVKVAYK---ALKDKLREYNKRDAKFY 540 >gi|15899426|ref|NP_344031.1| hypothetical protein SSO2710 [Sulfolobus solfataricus P2] gi|284173233|ref|ZP_06387202.1| hypothetical protein Ssol98_01050 [Sulfolobus solfataricus 98/2] gi|13816030|gb|AAK42821.1| Conserved hypothetical protein [Sulfolobus solfataricus P2] gi|261601199|gb|ACX90802.1| TPR repeat-containing protein [Sulfolobus solfataricus 98/2] Length = 302 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 44/115 (38%), Gaps = 20/115 (17%) Query: 63 KAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + + + +++A E + + K+L A+ ++ GKY QA + I Sbjct: 149 RGDILFQLKKYNEAIEEYKTNLND--------DKNLYAIAYTYFTMGKYDQALEYFNKAI 200 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + PE YY G + + T + R +E ++PY+K Sbjct: 201 SANPEDP-----YYYQGKAETLLF------MGRTNEAYNTIKRALEIDPDNPYIK 244 >gi|78047017|ref|YP_363192.1| hypothetical protein XCV1461 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035447|emb|CAJ23092.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 251 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 45/132 (34%), Gaps = 19/132 (14%) Query: 64 AVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A L ++++A E++ + +L A Q+ G+ QQ + I Sbjct: 95 AETLLARGDYAQAAEHYQGALRGLY---RDDPHLMLGLAKAQFGLGQPQQTRQTLDALIA 151 Query: 123 QYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P ++ D G + YA+ + T+ L + + Y + AR Sbjct: 152 ANPSFRSHD------GHLLYARAVEGS----GDTEAALHEYETLAQGYP----GEEARVR 197 Query: 182 VTVGRNQLAAKE 193 ++A + Sbjct: 198 YAQLLQRIARND 209 >gi|15618603|ref|NP_224889.1| hypothetical protein CPn0693 [Chlamydophila pneumoniae CWL029] gi|15836225|ref|NP_300749.1| hypothetical protein CPj0693 [Chlamydophila pneumoniae J138] gi|16752347|ref|NP_444605.1| type III secretion chaperone, putative [Chlamydophila pneumoniae AR39] gi|33242051|ref|NP_876992.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Chlamydophila pneumoniae TW-183] gi|4376995|gb|AAD18832.1| TPR Repeats-CT683 hypothetical protein [Chlamydophila pneumoniae CWL029] gi|8163354|gb|AAF73621.1| type III secretion chaperone, putative [Chlamydophila pneumoniae AR39] gi|8979065|dbj|BAA98900.1| TPR repeats-CT683 hypothetical protein [Chlamydophila pneumoniae J138] gi|33236561|gb|AAP98649.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Chlamydophila pneumoniae TW-183] Length = 339 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 71/204 (34%), Gaps = 34/204 (16%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + +Y KAV+ + + +++ P K+ + F+ + ++ + Sbjct: 141 DPWNPQSLYNKAVILSEMDDEAESIRLLEVAVAKNPL-YW--KAWVKLGFLLSRSKRWDK 197 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A E + P ++ +Y +G+ Y + + T+L L+ + Sbjct: 198 ATEAYERVVQLRP---DLSDGHYNLGLCYLTLDK--------TRLALKAFQEALFL---- 242 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 + A + VG L K++ R Y A + L + E A Sbjct: 243 -NAEDADAHFYVGLAHLDLKQM--------REAYEAFNSALSINLEH-------ERAHYL 286 Query: 233 LVEAYVALALMDEAREVVSLIQER 256 L + D+A + + +Q++ Sbjct: 287 LGYLHHMQGETDKATKELLFLQKK 310 >gi|322500914|emb|CBZ35991.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 873 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 12/110 (10%), Positives = 34/110 (30%), Gaps = 5/110 (4%) Query: 9 ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68 + + + + + + G ++ L VR + Y + + + Sbjct: 31 LEEAAKSEHNVNELLSIHCLRATLAAMKGSMDVTAITAQLAPGEPVRVPVQSYLEGIAAM 90 Query: 69 KEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 + + A R F +++ A V Y +Y+++ + Sbjct: 91 ARGDLTTARRRLETAVERCEGFGA----AMVCLAAVYYLTSQYEKSYAQY 136 >gi|313675474|ref|YP_004053470.1| hypothetical protein [Marivirga tractuosa DSM 4126] gi|312942172|gb|ADR21362.1| Tetratricopeptide TPR_1 repeat-containing protein [Marivirga tractuosa DSM 4126] Length = 1579 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 6/85 (7%) Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93 FL ++ D L Y + + + K++N+S + + + P Sbjct: 836 FLQDKISEAIADYDLALAEKPDYDQALLNRGSAHYKQKNYSASIADLEKTEKKSP----- 890 Query: 94 RKSLLMSAFVQYSAGKYQQAASLGE 118 + M Y ++++A S E Sbjct: 891 -EVTEMLGLAYYKTKQFEKALSNME 914 >gi|238754986|ref|ZP_04616335.1| hypothetical protein yruck0001_15380 [Yersinia ruckeri ATCC 29473] gi|238706845|gb|EEP99213.1| hypothetical protein yruck0001_15380 [Yersinia ruckeri ATCC 29473] Length = 389 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 59/183 (32%), Gaps = 34/183 (18%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 ++ + +A + F Q + F A + L++ + + +A + E + Sbjct: 114 GRDYMAAGLYDRAEDMFTQLIEETEFRIGALQ-QLLTI--HQATSDWLKAIEVAERLVKL 170 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 D++ +++ + + + S + A + Sbjct: 171 -------------------------GKDRQRSEIA-HFYCELALQAMGSDDLDKAMNLLK 204 Query: 184 VGRNQ---LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240 N A + GR ++ RG+Y A Q VL D E EA+ L + Y L Sbjct: 205 KAANADKDCARVSIMQGRVHIARGDYGKAAEALQQVLE--QDKEVVSEALPMLHDCYQHL 262 Query: 241 ALM 243 Sbjct: 263 QQP 265 >gi|229495824|ref|ZP_04389552.1| BatE, TRP domain containing protein [Porphyromonas endodontalis ATCC 35406] gi|229317398|gb|EEN83303.1| BatE, TRP domain containing protein [Porphyromonas endodontalis ATCC 35406] Length = 267 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 16/120 (13%), Positives = 38/120 (31%), Gaps = 28/120 (23%) Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76 + + +F L I ++ + + + D++ Q ++ +++A Sbjct: 3 HPMKRFLLLICLFVSALA-----HAQNTAGVVPNEADIKAQ----------YDKEQYTQA 47 Query: 77 YEYFNQCSRDFPFAGVARKSL------LMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 E + + +A K++ Y G+ A E + P K V Sbjct: 48 IEGYRELL-------LASKAIPSAALYYNLGNAYYRNGELGWAILSYERALRLAPRDKYV 100 >gi|224122920|ref|XP_002318949.1| predicted protein [Populus trichocarpa] gi|222857325|gb|EEE94872.1| predicted protein [Populus trichocarpa] Length = 471 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 28/92 (30%), Gaps = 10/92 (10%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + KY++A I P V Y M+Y ++ R D L Sbjct: 91 YFKQKKYKEAIECYSRSIALSPT--AVAYAN--RAMAYLKIKRQAEDDCT---EALNLDD 143 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195 R ++ Y S R + + + E Sbjct: 144 RYIKAY--SRRAT-TRKELGKLKESIEDSEFA 172 >gi|117928458|ref|YP_873009.1| TPR repeat-containing protein [Acidothermus cellulolyticus 11B] gi|117648921|gb|ABK53023.1| Tetratricopeptide TPR_2 repeat protein [Acidothermus cellulolyticus 11B] Length = 156 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 35/81 (43%), Gaps = 8/81 (9%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM-SAFVQYSAGKYQQAASLGEE 119 Y + + L+ + + A + ++ ++ P + +S+L Q+ + +Y A E Sbjct: 41 YTRGLRLLESGSAAAAEQVLHRAAQAAPGS----RSILEALGRAQFQSRRYSAARESFER 96 Query: 120 YITQYPESKNVDYVYYLVGMS 140 + P DY + +G++ Sbjct: 97 IVNANPTD---DYAQFGMGLA 114 >gi|116329260|ref|YP_798980.1| cAMP-binding protein, regulatory protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330134|ref|YP_799852.1| cAMP-binding protein, regulatory protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116122004|gb|ABJ80047.1| cAMP-binding protein, regulatory protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123823|gb|ABJ75094.1| cAMP-binding protein, regulatory protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 352 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 16/43 (37%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236 + + + K + AI F+ L +Y + A L A Sbjct: 133 MNVAEVFYKNNNFPHAIYAFEKYLQHYPGTTYTGRATELLELA 175 >gi|108758688|ref|YP_631542.1| transglycosylase SLT domain-containing protein [Myxococcus xanthus DK 1622] gi|108462568|gb|ABF87753.1| transglycosylase SLT domain protein [Myxococcus xanthus DK 1622] Length = 801 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 10/72 (13%), Positives = 19/72 (26%), Gaps = 14/72 (19%) Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 + R+ + + + YLK G A+ R + Sbjct: 386 ETYERLAREFPDHSFADDGL--------------FYAADLYLKTGRPKEAMARLDTLARL 431 Query: 220 YSDAEHAEEAMA 231 Y + EA+ Sbjct: 432 YPQGDFLGEALF 443 Score = 35.5 bits (81), Expect = 9.2, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 21/50 (42%) Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 ++ + + D A++ + + Y+ EA + + YPQG + Sbjct: 388 YERLAREFPDHSFADDGLFYAADLYLKTGRPKEAMARLDTLARLYPQGDF 437 >gi|304321651|ref|YP_003855294.1| TPR domain protein [Parvularcula bermudensis HTCC2503] gi|303300553|gb|ADM10152.1| TPR domain protein [Parvularcula bermudensis HTCC2503] Length = 854 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 18/56 (32%), Gaps = 3/56 (5%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +A + + A E + A +++A Y+ G A S + Sbjct: 131 EAEKAVTDGKPQLALEKLEALPQK---GAYASMGKMIAARAHYALGDLLAARSAID 183 >gi|301336134|ref|NP_001180380.1| transmembrane and TPR repeat-containing protein 1 isoform 1 [Homo sapiens] Length = 882 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 52/155 (33%), Gaps = 30/155 (19%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP-YDQRAT 155 LL + + + +A ++ + P+ V +S + +Q Sbjct: 756 LLSAIYS--KQENHDKALDAIDKALQLKPKDPKV--------ISELFFTKGNQLREQNLL 805 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVG-RNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 + V+ + A+ ++ +G + +G+YV+A ++ Sbjct: 806 DKAFESYRVAVQLNPD-----QAQAWMNMGGIQHI-------------KGKYVSARAYYE 847 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 L D++ +E +A+L L + E + Sbjct: 848 RALQLVPDSKLLKENLAKLDRLEKRLQEVREKDQT 882 >gi|300741344|ref|ZP_07071365.1| TPR repeat protein [Rothia dentocariosa M567] gi|300380529|gb|EFJ77091.1| TPR repeat protein [Rothia dentocariosa M567] Length = 446 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 73/222 (32%), Gaps = 38/222 (17%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 + S +Y + V + + +A E + S D P A + + V Sbjct: 217 QQVPSTVPDQYAMALNNLGVTYYNQGKTEQALELWETVSADIP-EQYAT-AQMNLGMVYD 274 Query: 106 SAGKYQQAASLGEEYITQYPES--KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 S GK +QA + E PES + Y +G SY + Q ++ Sbjct: 275 SQGKLEQAIAAWERV----PESLPERYASAQYNIGTSYVE--------QGKPTKAVEAWE 322 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 RI S A + G Y ++G A+ ++ V + + Sbjct: 323 RI----PASASEPYAVA------------QYNTGLIYEEQGNIDDALVAWERVPKD--AS 364 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265 EH +A + AY L DEA V P+ +Y Sbjct: 365 EHFYKAQFNIGGAYYKLGETDEAVAVWK----NIPESASEQY 402 >gi|254487737|ref|ZP_05100942.1| TPR-domain containing protein [Roseobacter sp. GAI101] gi|214044606|gb|EEB85244.1| TPR-domain containing protein [Roseobacter sp. GAI101] Length = 188 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 7/73 (9%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLG 117 + ++ + L + A E+F + P FA ++ + A Y A Sbjct: 71 LLKRGMDALAAGDTPLAIEHFTALTDHAPLFAEGYHARAQ-----AYFRADLYGPAIDDL 125 Query: 118 EEYITQYPESKNV 130 E + P+ N Sbjct: 126 EMALALNPQQFNA 138 >gi|195376269|ref|XP_002046919.1| GJ12224 [Drosophila virilis] gi|194154077|gb|EDW69261.1| GJ12224 [Drosophila virilis] Length = 661 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 8/69 (11%) Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGV---- 92 R +SV + E+Y +A ++ Q ++A E F + F A + Sbjct: 581 CPRCRKNVSLKESVAKLIKIEELYREAAEAMQAQKTNEAIELFKEGIDAFFQIAALPHKD 640 Query: 93 ---ARKSLL 98 A+++LL Sbjct: 641 TLIAQQALL 649 >gi|109130369|ref|XP_001083759.1| PREDICTED: peptidyl-prolyl cis-trans isomerase D-like [Macaca mulatta] Length = 370 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 2/82 (2%) Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKA 76 +L AL+ +I C L Q + D L+++ D + +Y +A + + + + +A Sbjct: 267 KLQPIALSCVLNIGACKLKMSNWQGAIDSCLEALEIDPSNTKALYRRAQGWQRLKEYDQA 326 Query: 77 YEYFNQCSRDFPFAGVARKSLL 98 + P A ++ L Sbjct: 327 LADLKKAQEIAP-EDKAIQAEL 347 >gi|305665349|ref|YP_003861636.1| TPR repeat-containing protein [Maribacter sp. HTCC2170] gi|88710104|gb|EAR02336.1| TPR repeat protein:HAT (Half-A-TPR) repeat [Maribacter sp. HTCC2170] Length = 378 Score = 36.2 bits (83), Expect = 4.7, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 3/70 (4%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 KA++ + + KA +F + A+ Y +++A + I Sbjct: 189 KALVLFNDAAYEKAIPWFERVLELGETKKY---VYEKLAYCHYKNWDFEKAKTAHRILIE 245 Query: 123 QYPESKNVDY 132 PE+ V Y Sbjct: 246 MNPENPEVYY 255 >gi|291515779|emb|CBK64989.1| Tetratricopeptide repeat [Alistipes shahii WAL 8301] Length = 662 Score = 36.2 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 47/139 (33%), Gaps = 17/139 (12%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 D + +A+L + +++ A E +++ + ++ A V G+ ++ Sbjct: 260 DSTNSLTYFNRAMLRTQIGDYNHALEDYDKVAL---YSPNNVLVYYNRAGVYAQLGEIER 316 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-- 170 A I YP+ N Y+Y G +R++ D + K R + Y Sbjct: 317 AVEDYTSAIKLYPDFANA-YIY--RG-----RLRELLRDPQGAKEDRSIAQRKIAEYRSR 368 Query: 171 --NSPYV--KGARFYVTVG 185 +S Y Sbjct: 369 LNDSTYSIYADTTQRFDRL 387 >gi|261415308|ref|YP_003248991.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371764|gb|ACX74509.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326296|gb|ADL25497.1| tetratricopeptide repeat protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 341 Score = 36.2 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 19/59 (32%), Gaps = 3/59 (5%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++ E+A + F +A + + A Y KY +AA+ Sbjct: 22 DLMERANALYRSGKFKQAILLYRKAEDR---GADPVAVSFNIANSYYQMDKYPEAAAAY 77 >gi|190892419|ref|YP_001978961.1| exported protein, TonB-dependent receptor [Rhizobium etli CIAT 652] gi|190697698|gb|ACE91783.1| putative exported protein, TonB-dependent receptor [Rhizobium etli CIAT 652] Length = 1226 Score = 36.2 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 6/84 (7%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +++ R++ D + + + +L+ K+ E S P +S L Sbjct: 485 MKEAKREIDTAIALDPSFDIALLVRGRYYLQSGERDKSLEDLLAASTANPAHS---QSQL 541 Query: 99 MSAFVQYSAGK---YQQAASLGEE 119 M A Y G QQA + Sbjct: 542 MLAAAHYEKGDRIPSQQALDNADR 565 >gi|169336957|ref|ZP_02620098.2| TPR domain protein [Clostridium botulinum C str. Eklund] gi|169296391|gb|EDS78524.1| TPR domain protein [Clostridium botulinum C str. Eklund] Length = 462 Score = 36.2 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 32/81 (39%), Gaps = 7/81 (8%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E +K L+++ + ++ Y+ + P A+ + +Y++A Sbjct: 73 EEYRKKGNYALEKKQYRRSILYYKKILLIEPKITFAKN---KLGLAFFYNNQYEEAIIQF 129 Query: 118 EEYITQYPESK----NVDYVY 134 E I P++ N+ YVY Sbjct: 130 RELIQLNPKNSIFYNNLAYVY 150 >gi|115376114|ref|ZP_01463359.1| TPR repeat protein, putative [Stigmatella aurantiaca DW4/3-1] gi|310821025|ref|YP_003953383.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115366929|gb|EAU65919.1| TPR repeat protein, putative [Stigmatella aurantiaca DW4/3-1] gi|309394097|gb|ADO71556.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 459 Score = 36.2 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 30/232 (12%), Positives = 63/232 (27%), Gaps = 42/232 (18%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + L+ + ++ A + + P A + L A + G A + Sbjct: 144 YRLGIAHLESEQYTAALGPLRRAAELAP-GKAAVR--LPLAKALFRTGDAPGAVAALNAV 200 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA----------------TKLMLQYMSR 164 + P V + V + + A + + Sbjct: 201 VRASPSPAEVATA---RALMNQIADPFVGFPKAAEGKLEEGIKLLQELDIPQQAILAFEE 257 Query: 165 IVERYTN-----------SPYVKGARFYVTVGRNQL------AAKEVEIGRYYLKRGEYV 207 +++ Y + + A V + + + +G YL R Sbjct: 258 LLQSYPDLAVVHALLGLAYQRLDDAGRAVDEFKQAIERAPRDGKNYLYLGELYLSRQRSD 317 Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 AA + + + A RL + Y+ + ARE ++ P Sbjct: 318 AAREAYTKAVELNP---LLDAAWFRLGDLYLDRRELTAAREAFQVLTWLQPD 366 >gi|146298486|ref|YP_001193077.1| TPR repeat-containing protein [Flavobacterium johnsoniae UW101] gi|146152904|gb|ABQ03758.1| BatE-like protein [Flavobacterium johnsoniae UW101] Length = 248 Score = 36.2 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 28/81 (34%), Gaps = 6/81 (7%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAG 108 ++ V + + +EK ++ + +A + + ++ + + L A Y Sbjct: 11 ISQVFFAQSSFEKGNALYQKGQYQEAAQVYEDILKE----NKQQSAELYFNLANSYYKLN 66 Query: 109 KYQQAASLGEEYITQYPESKN 129 K + E+ + P Sbjct: 67 KVAPSIYNYEKALVLKPNDPE 87 >gi|24112679|ref|NP_707189.1| tetratricopeptide repeat protein [Shigella flexneri 2a str. 301] gi|24051595|gb|AAN42896.1| putative heat shock protein [Shigella flexneri 2a str. 301] Length = 389 Score = 36.2 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 36/186 (19%) Query: 64 AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + +A + FNQ DF + + + A ++Q+A + E + Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQA-----TSEWQKAIDVAERLV 168 Query: 122 TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + + V+ ++ + + + D+ K NS Sbjct: 169 KLGKDKQRVEIAHFYCELALQHM-ASDDLDRAMTLLKKGAAADK-------NS------- 213 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 A + +GR ++ +GEY A+ Q V++ D E E + L Y Sbjct: 214 ----------ARVSIMMGRVFMAKGEYAKAVESLQRVIS--QDRELVSETLEMLQTCYQQ 261 Query: 240 LALMDE 245 L E Sbjct: 262 LGKTAE 267 >gi|300869662|ref|YP_003784533.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] gi|300687361|gb|ADK30032.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] Length = 916 Score = 36.2 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 31/85 (36%), Gaps = 7/85 (8%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109 +++ Q+E+Y + ++S A + S + + L A + Sbjct: 237 KISNASVQKELYAW-DSLIISNDYSNAIVKLDSLSN---YTKDYPEIELALAKTYFKMKN 292 Query: 110 YQQAASLGEEYITQYPESKNVDYVY 134 Y ++ + +I +KN D Y Sbjct: 293 YNESKDMLNRFIK---NNKNFDEAY 314 >gi|297475073|ref|XP_002687765.1| PREDICTED: transmembrane and tetratricopeptide repeat containing 1-like [Bos taurus] gi|296487347|gb|DAA29460.1| transmembrane and tetratricopeptide repeat containing 1-like [Bos taurus] Length = 939 Score = 36.2 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 28/230 (12%), Positives = 59/230 (25%), Gaps = 64/230 (27%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A + +A ++ + +P A +L +A + Sbjct: 544 YNYANFLKDQGRNREAIYHYRTALKLYP--RHAS-ALNNLG---TLTRDTTEAKMYYQRA 597 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + P+ + +G ++ Q + + + ++ A Sbjct: 598 LQLNPQHNR---ALFNLG--------NLLKSQEKKEEAITLLKDSIKYGPE---FADAYS 643 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF--------------------QLVLANY 220 + LA +E R+ Y+A I + + +A+Y Sbjct: 644 SLASL---LAEQE----RFKEAEEIYLAGIKKCPDSSDLHNNYGVFLVDTGFPEKAVAHY 696 Query: 221 SD----AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 + AM L Y +L A E W + Sbjct: 697 QQAIKLSPSHHVAMVNLGRLYRSLGDNSVAEE-------------WYKRA 733 >gi|225621139|ref|YP_002722397.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] gi|225215959|gb|ACN84693.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] Length = 193 Score = 36.2 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 13/113 (11%), Positives = 38/113 (33%), Gaps = 14/113 (12%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 + + + + A+ ++ + +++A + + + A + Y Y +A Sbjct: 2 ISEENKYFYSALNNIQNKRYNEAIDDLLKVIEVDSNN---LDAYHNLARIYYDIKDYDKA 58 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 + I YP + YY Y D+ ++ + +++ Sbjct: 59 IDTYNKSIEIYPHDSD---AYYYRAEVYI--------DKEDYDKAIEDLEKVI 100 >gi|218904503|ref|YP_002452337.1| TPR domain protein [Bacillus cereus AH820] gi|218536370|gb|ACK88768.1| TPR domain protein [Bacillus cereus AH820] Length = 304 Score = 36.2 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 56/151 (37%), Gaps = 36/151 (23%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 +++K++ + +A E F + P + ++ A Y+ G+ ++A E ++ Sbjct: 75 GDIYMKQKKWEEAKEAFQKSISIQP----SDEAYHNVAVAHYNLGELEEA---SEFFLR- 126 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 + + DY+ Y SY + + D+ K L +R Sbjct: 127 --AAGDSDYIMY----SYVKCLIDLGR-TTEAKEKLDAFNR------------------- 160 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 N L E+ + Y++ Y AI F+ Sbjct: 161 ESDNFLG--EMMVADLYVELNCYKEAIEWFE 189 >gi|126656534|ref|ZP_01727795.1| soluble lytic transglycosylase [Cyanothece sp. CCY0110] gi|126622220|gb|EAZ92927.1| soluble lytic transglycosylase [Cyanothece sp. CCY0110] Length = 727 Score = 36.2 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 32/113 (28%), Gaps = 19/113 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A L+E A ++P + LL + + A +E Sbjct: 91 YLLANDLLEEYEGGPALRQLEGLENEYPT--LVPYILLKRGRGYELTNETELAQETWQEL 148 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 I YP+S Y +G YD +E++ P Sbjct: 149 IETYPDSLASAEALYQLG----------KYDASYWDQA-------IEKFPQHP 184 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 19/162 (11%), Positives = 44/162 (27%), Gaps = 32/162 (19%) Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159 A + + + A ++ P++ YY + + V + ++ Sbjct: 240 IADGYWEVNDFYKGAIAYKKADKT-PQN------YYRIA-----RGQQVQPPGENKETVI 287 Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219 +++ + + + AI F ++ Sbjct: 288 AAYRQLMFGFPKAEETALGLKRLAQL------------------SPPQTAITYFDEIIQK 329 Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + E A EA+ L EA +V + +YP Sbjct: 330 FP--EQAPEALLDKAALLDKLNRKAEAAKVRQTLLSKYPNSD 369 >gi|124026346|ref|YP_001015462.1| hypothetical protein NATL1_16401 [Prochlorococcus marinus str. NATL1A] gi|123961414|gb|ABM76197.1| Hypothetical protein NATL1_16401 [Prochlorococcus marinus str. NATL1A] Length = 779 Score = 36.2 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 3/60 (5%) Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + KA + +C++ FP ++ L +F+ Y + + A + EE I P N Sbjct: 70 KGENEKAIRLYKKCAKSFPNHIYSK---LNLSFLYYKLNQLEIAEKIIEEAIQLKPSMPN 126 >gi|117623540|ref|YP_852453.1| hypothetical protein APECO1_440 [Escherichia coli APEC O1] gi|218558270|ref|YP_002391183.1| tetratricopeptide repeat protein [Escherichia coli S88] gi|115512664|gb|ABJ00739.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|218365039|emb|CAR02742.1| conserved hypothetical protein [Escherichia coli S88] gi|323949116|gb|EGB45008.1| TPR repeat-containing protein [Escherichia coli H252] Length = 389 Score = 36.2 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 36/186 (19%) Query: 64 AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + +A + FNQ DF + + + A ++Q+A + E + Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQA-----TSEWQKAIDVAERLV 168 Query: 122 TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + + V+ ++ + + + D+ K NS Sbjct: 169 KLGKDKQRVEIAHFYCELALQHM-ASDDLDRAMTLLKKGAAADK-------NS------- 213 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 A + +GR ++ +GEY A+ Q V++ D E E + L Y Sbjct: 214 ----------ARVSIMMGRVFMAKGEYAKAVESLQRVIS--QDRELVSETLEMLQTCYQQ 261 Query: 240 LALMDE 245 L E Sbjct: 262 LGKTAE 267 >gi|91205449|ref|YP_537804.1| TPR repeat-containing protein [Rickettsia bellii RML369-C] gi|91068993|gb|ABE04715.1| Tetratricopeptide repeat-containing protein [Rickettsia bellii RML369-C] Length = 1136 Score = 36.2 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 46/143 (32%), Gaps = 20/143 (13%) Query: 115 SLGEEYITQYP-ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + + YP + + +G+SY D L Y +E Y + Sbjct: 792 EALKMFQELYPSNHSYIAALLNSIGLSY--------KDLGNPAKALIYYKGALEIY-QTL 842 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-----DAEHAEE 228 Y + ++ N IG Y K G + + VL Y + + Sbjct: 843 Y-QDNPLHIVSMLNTFN----SIGAAYYKLGNTSEGLKYLKYVLEMYKALYQNNNPYIAS 897 Query: 229 AMARLVEAYVALALMDEAREVVS 251 A+ + EAY L + + E + Sbjct: 898 ALNNVGEAYKGLGNISKGLEYLE 920 >gi|169774883|ref|XP_001821909.1| transcriptional corepressor Cyc8 [Aspergillus oryzae RIB40] gi|83769772|dbj|BAE59907.1| unnamed protein product [Aspergillus oryzae] Length = 869 Score = 36.2 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 45/146 (30%), Gaps = 28/146 (19%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAG 108 D + Y ++ + + KAYE + Q P + Y Sbjct: 297 ADNTDAQSWYLLGRCYMSQAKYPKAYEAYQQAVYRDGRNP-TFWC-----SIGVLYYQIN 350 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRI 165 +Y+ A I P + V+Y +G Y I D L R Sbjct: 351 QYRDALDAYSRAIRLNP---YISEVWYDLGTLYESCNNQISD----------ALDAYGRA 397 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAA 191 + + ++ + + + ++QL+ Sbjct: 398 ADLDPTNVHI---KARLQLLQSQLSG 420 >gi|16766902|ref|NP_462517.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161616676|ref|YP_001590641.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197261926|ref|ZP_03162000.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|238910356|ref|ZP_04654193.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|269849704|sp|Q8ZLB8|BCSC_SALTY RecName: Full=Cellulose synthase operon protein C; Flags: Precursor gi|16422179|gb|AAL22476.1| putative TPR-repeat-containing protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|19171165|emb|CAC86196.1| putative cellulose synthase operon C protein [Salmonella typhimurium LT2] gi|161366040|gb|ABX69808.1| hypothetical protein SPAB_04493 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197240181|gb|EDY22801.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|261248769|emb|CBG26619.1| putative polysaccharide biosynthesis protein subunit C [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995858|gb|ACY90743.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|312914640|dbj|BAJ38614.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226668|gb|EFX51718.1| Cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|332990467|gb|AEF09450.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 1180 Score = 36.2 bits (83), Expect = 4.8, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 466 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 522 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 523 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 569 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 570 AALAHLNTL----PTSQW 583 >gi|320352459|ref|YP_004193798.1| TPR repeat-containing protein [Desulfobulbus propionicus DSM 2032] gi|320120961|gb|ADW16507.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobulbus propionicus DSM 2032] Length = 758 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 33/239 (13%), Positives = 80/239 (33%), Gaps = 53/239 (22%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119 + A +L + A ++ ++ P +A ++ L GK+ A + ++ Sbjct: 105 KTAEFYLLTKKKEDAQKHIDEVLVQAPDNKDALALQANLELV-----DGKFDAAIATVDK 159 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPY------------------------DQRAT 155 I P +++ Y +S Q +++ Sbjct: 160 AIAGAP-NEDRFYAIKGRALSAKQQFPAAENAFLKALELDGKKLANHATLAAFYVERKEL 218 Query: 156 KLMLQYMSRIVERYTNS--PYVKGARFYVTVGRNQLAAKEV---------------EIGR 198 + ++ + +S PY++ A + A + + I Sbjct: 219 SKAKASLEKMAAAFPDSSQPYLQMASIELMENNPDAAEQHLTQALKVDPKNSKLKTAIAD 278 Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256 +Y K+G++ A ++ + D + E+A A+L Y D+A+ E+ ++ + Sbjct: 279 FYSKKGKFEQAEQLYKEAI---QDTDKPEDAEAQLANFYFDHGKFDQAKVELDKVVAKN 334 >gi|311254909|ref|XP_003125999.1| PREDICTED: tetratricopeptide repeat protein 38-like [Sus scrofa] Length = 469 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 19/126 (15%) Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA- 101 ++ V + + + +++ AV + NF KA + + Q +D P M A Sbjct: 94 AKMVEISKTQPLTQREQLHVAAVETFAKGNFPKACDLWEQILQDHPTD--------MLAL 145 Query: 102 ----FVQYSAGKYQQAASLGEEYITQYPE-SKNVDYVYYLVGMSYAQMIRDVPYDQ--RA 154 + G +Q YP + ++ Y+ G+ ++ YD+ + Sbjct: 146 KFSHDAYFYLGYQEQMRDSVAR---VYPFWTPDIPLSSYVKGIYSFGLMETNFYDRAEKL 202 Query: 155 TKLMLQ 160 K L Sbjct: 203 AKEALS 208 >gi|308062401|gb|ADO04289.1| hypothetical protein HPCU_05705 [Helicobacter pylori Cuz20] Length = 331 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 62/145 (42%), Gaps = 19/145 (13%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS----RDFPFAGVARK 95 R++ ++ D+ Q+E++++A+ FLK++++++A E R + + A Sbjct: 189 RKTQEKAKIEFDKDLSKQKEIFQEALTFLKDKSYAEARERLLWLEANSYRLY-YVRYA-- 245 Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155 V Y KY++A +E ++ + + + S+ ++ D Y Sbjct: 246 ----LGEVAYGEKKYREAIKYYKESALLNKKASYMPVLLWHTAWSFKKIKDDQNY----- 296 Query: 156 KLMLQYMSRIVERYTNSPYVKGARF 180 ++++ + Y +S K A+ Sbjct: 297 ---YKFLNTLQHLYPSSEQAKMAKK 318 >gi|290998908|ref|XP_002682022.1| predicted protein [Naegleria gruberi] gi|284095648|gb|EFC49278.1| predicted protein [Naegleria gruberi] Length = 463 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 7/68 (10%) Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE----V 249 IG YY +Y AI + L E A+ R+ + L D+A+ Sbjct: 209 YAIGLYYEMIKDYNKAIDHYNGALKKDQQFEA---ALERMAVCQMNLGQFDKAKSSYDLT 265 Query: 250 VSLIQERY 257 + + ++ Y Sbjct: 266 LQMNKQNY 273 >gi|194451942|ref|YP_002047644.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205359078|ref|ZP_02666711.2| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194410246|gb|ACF70465.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205338979|gb|EDZ25743.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 1150 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 436 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 492 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 493 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 539 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 540 AALAHLNTL----PTSQW 553 >gi|149186272|ref|ZP_01864586.1| TPR domain protein [Erythrobacter sp. SD-21] gi|148830303|gb|EDL48740.1| TPR domain protein [Erythrobacter sp. SD-21] Length = 556 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 41/141 (29%), Gaps = 34/141 (24%) Query: 64 AVLFLKEQNFSKAYEYFNQCSR------DFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 A+ +NF A + + + + ++ +A G + AAS Sbjct: 79 AIALTSAENFPAAIDQLERVEDACASMPRY----WSIRA--NAAR---QNGDIEGAASSY 129 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY--- 174 + +T P+ L G + ++R A + + R + + Sbjct: 130 DRCLTLQPDHPRA-----LHGRARVALVR-------AEEEAPAFFERALAVVPSDADLWL 177 Query: 175 ----VKGARFYVTVGRNQLAA 191 A + R+ A Sbjct: 178 GKAQALDAAGRLEEARDLTAQ 198 >gi|114775705|ref|ZP_01451273.1| TPR repeat protein [Mariprofundus ferrooxydans PV-1] gi|114553816|gb|EAU56197.1| TPR repeat protein [Mariprofundus ferrooxydans PV-1] Length = 259 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 15/106 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ ++ A + F Q F + L A +GK QA +L E I Sbjct: 146 NLGNALSGQKKYTAAIQAFQQART---FNPDNTLAALRLADTYALSGKPLQAQALYENII 202 Query: 122 TQYPESKNVDYVYYLVGM--SYAQMIRDVPYDQRATKLMLQYMSRI 165 + P+++ + G+ Q R A + L SR+ Sbjct: 203 SSQPQNRAA-----VEGLVRVLIQQHR-----PNAARNALSAFSRV 238 >gi|34762717|ref|ZP_00143707.1| TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887616|gb|EAA24695.1| TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 558 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 37/122 (30%), Gaps = 25/122 (20%) Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN---------------FSKAYEYFNQCS 84 + + + Y + + N F KA E +N+ Sbjct: 17 SKKIEEYSKKIEKNPNDASNYYNRGNAYYNRGNTFISLEKFQEAVDDDFEKAIEDYNRAI 76 Query: 85 RDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 P + V Y+ KY++A + + I P K Y +Y+ G SY Sbjct: 77 ELNPNNTSYY-----YNRGKVFYNLKKYKKAITDFNKAIKLNPNDKE--Y-FYIRGSSYY 128 Query: 143 QM 144 + Sbjct: 129 NL 130 >gi|313681894|ref|YP_004059632.1| tpr repeat-containing protein [Sulfuricurvum kujiense DSM 16994] gi|313154754|gb|ADR33432.1| TPR repeat-containing protein [Sulfuricurvum kujiense DSM 16994] Length = 292 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 43/126 (34%), Gaps = 13/126 (10%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 ++A ++ + A YF Q + + + + M Q+ KY++A +E Sbjct: 179 KEANKLFSQKKYDDAQSYFEQMIQKKYKVSD----AYFMIGETQFERKKYKEAVLSYKES 234 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + ++ Y+ + I AT + ++ S K A+ Sbjct: 235 AS---RNEK---ALYMPTLLLHSGISMEKTGDTATAKAF--YQATISKFGGSGASKEAQE 286 Query: 181 YVTVGR 186 ++ + Sbjct: 287 RLSKLK 292 >gi|301060387|ref|ZP_07201250.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] gi|300445583|gb|EFK09485.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] Length = 785 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 15/125 (12%), Positives = 40/125 (32%), Gaps = 21/125 (16%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 Y +++ NF +A +++ R P F + + +G ++A E+ Sbjct: 559 YNLGNAYMRNGNFEQAVSQYSEALRYQPDF----VNARVNLGNALARSGNPRKAILQYEK 614 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + P+ +Y + ++A T+ + + ++ A Sbjct: 615 ALASQPDHPG---AHYNLAGAFAAS--------GKTQKAVVHYKEVLRLQPE-----DAT 658 Query: 180 FYVTV 184 + Sbjct: 659 ARFQL 663 Score = 35.9 bits (82), Expect = 6.8, Method: Composition-based stats. Identities = 25/185 (13%), Positives = 57/185 (30%), Gaps = 34/185 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 A + + ++A +++ + + A + AG+ A + + + Sbjct: 492 NLANILADQGYLNEAVKHYEKALTL---NRENANARYNLANTFFRAGRTDDAIAQYRKAL 548 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P ++ +Y +G +Y + + + S + + + Sbjct: 549 DIRPNDPSI---HYNLGNAYMRN--------GNFEQAVSQYSEALRYQPDFVNAR----- 592 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 N LA + G AI +++ LA+ D A L A+ A Sbjct: 593 -VNLGNALA-----------RSGNPRKAILQYEKALASQPD---HPGAHYNLAGAFAASG 637 Query: 242 LMDEA 246 +A Sbjct: 638 KTQKA 642 >gi|319761487|ref|YP_004125424.1| pep-cterm system tpr-repeat lipoprotein [Alicycliphilus denitrificans BC] gi|317116048|gb|ADU98536.1| PEP-CTERM system TPR-repeat lipoprotein [Alicycliphilus denitrificans BC] Length = 926 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 26/190 (13%), Positives = 54/190 (28%), Gaps = 41/190 (21%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88 + + G ++ + + +Y +A+L + +F A E + R P Sbjct: 241 IVELLISQGKTTAAAESLQALEKAAPGRPQTLYLQAMLAYTKGDFKAAQESVQKLVRMAP 300 Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM--SYAQM-- 144 + ++L ++ G QA + + + P G+ SY ++ Sbjct: 301 ESA---RALELAGMTDLQLGANAQAEASLAKALQLNPG-----LAMARRGLVTSYMRLGR 352 Query: 145 -----------IRDVPYD-------------QRATKLMLQYMSRIVERYTNSPYVKGARF 180 I D Q +Y +R N A Sbjct: 353 LDKAIATLPSDIDGNDRDPGMLGLAGQAYMLQGDVDRAQRYFARASRLVPN-----DAVM 407 Query: 181 YVTVGRNQLA 190 ++ + LA Sbjct: 408 RTSLAVSHLA 417 >gi|229515739|ref|ZP_04405198.1| GGDEF family protein [Vibrio cholerae TMA 21] gi|229347508|gb|EEO12468.1| GGDEF family protein [Vibrio cholerae TMA 21] Length = 640 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAG--VARKSLLMS 100 D+ L + D +Y L + + A +Y N+ + + Sbjct: 188 DLLLSLLPDYVDPSGIYNDVGLLMGTLGQYVSALDYLNKALEYRLEQGNPLLIAQVEHSL 247 Query: 101 AFVQYSAGKYQQAASLGEEYITQY--PES--KNVDYVYYLVGMSYAQMIRDVPYDQRATK 156 + G+Y+++ E+ + P + + YV+ +G +Y ++ V DQ Sbjct: 248 GDTYFKQGRYEESILYFEQ-AKAHLTPANYLFGLAYVHLGLGKAYIELNNFVEGDQ-HLF 305 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L+Y++ + + LA + K +Y AI Sbjct: 306 QALEYVN---------QHKDQHLQGLIYL--SLAQ-----AHF--KEQKYAQAIDYANQA 347 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248 +A S++ +AY+ LA + EA + Sbjct: 348 VA-ISESASLPR---IKAQAYLQLAKIAEAEQ 375 >gi|226372372|gb|ACO51811.1| Cartilage-associated protein precursor [Rana catesbeiana] Length = 405 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 7/70 (10%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA--TKLML 159 + + +A + Y+ +P+ + + M+Y + + D + TK Sbjct: 158 YAYFKTDNLPKAVAAAHTYLLLHPDDEMMK-----RNMAYYKSMPDTENHIKDLETKNYE 212 Query: 160 QYMSRIVERY 169 + R V Y Sbjct: 213 NFFIRAVRAY 222 >gi|194735245|ref|YP_002116553.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194710747|gb|ACF89968.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] Length = 1172 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 458 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 514 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 515 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 561 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 562 AALAHLNTL----PTSQW 575 >gi|300795427|ref|NP_001179690.1| transmembrane and TPR repeat-containing protein 1 [Bos taurus] Length = 939 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 28/230 (12%), Positives = 59/230 (25%), Gaps = 64/230 (27%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A + +A ++ + +P A +L +A + Sbjct: 544 YNYANFLKDQGRNREAIYHYRTALKLYP--RHAS-ALNNLG---TLTRDTTEAKMYYQRA 597 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + P+ + +G ++ Q + + + ++ A Sbjct: 598 LQLNPQHNR---ALFNLG--------NLLKSQEKKEEAITLLKDSIKYGPE---FADAYS 643 Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF--------------------QLVLANY 220 + LA +E R+ Y+A I + + +A+Y Sbjct: 644 SLASL---LAEQE----RFKEAEEIYLAGIKKCPDSSDLHNNYGVFLVDTGFPEKAVAHY 696 Query: 221 SD----AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 + AM L Y +L A E W + Sbjct: 697 QQAIKLSPSHHVAMVNLGRLYRSLGDNSVAEE-------------WYKRA 733 >gi|149054218|gb|EDM06035.1| synaptonemal complex protein SC65 [Rattus norvegicus] Length = 443 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVD-YVYYLVGM 139 + + A + ++A + ++ + P+ + Y+ Y GM Sbjct: 156 YAHFKANRLEKAVAAAYTFLQRNPKHELTAKYLNYYRGM 194 >gi|190337484|gb|AAI63421.1| Prkri protein [Danio rerio] gi|190339858|gb|AAI63418.1| Prkri protein [Danio rerio] Length = 502 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 12/96 (12%), Positives = 28/96 (29%), Gaps = 10/96 (10%) Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA-KEVEIGRYYLKRGEYVAAI 210 Q +T+ + ++ + + E +RG+ A+ Sbjct: 123 QGSTQEAREDFQAVLNHSPDHEEAHDQLLKADKLESLQEEAHEAH------RRGDCRIAV 176 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 + V+ + E+ E Y+ L +A Sbjct: 177 QVLEHVIEL---SPWDPESRELRAECYIQLGEPRKA 209 >gi|56963669|ref|YP_175400.1| hypothetical protein ABC1904 [Bacillus clausii KSM-K16] gi|56909912|dbj|BAD64439.1| conserved hypothetical protein [Bacillus clausii KSM-K16] Length = 427 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 8/96 (8%), Positives = 30/96 (31%), Gaps = 7/96 (7%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 + + ++A + + + + +Y + ++ ++ +++ A E Sbjct: 178 INVGLALAEAYGANGQFEDALLLYHQQKQNELPPNALFNFGFTAFQQGDYTVAIEQLEAV 237 Query: 84 SRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLG 117 P + A + +Y++A Sbjct: 238 KTLDPDFTSVYVP-----LARAYEAEKRYEEAFETL 268 >gi|6753882|ref|NP_034349.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Mus musculus] gi|18314334|sp|P30416|FKBP4_MOUSE RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP4; Short=PPIase FKBP4; AltName: Full=52 kDa FK506-binding protein; Short=52 kDa FKBP; Short=FKBP-52; AltName: Full=59 kDa immunophilin; Short=p59; AltName: Full=FK506-binding protein 4; Short=FKBP-4; AltName: Full=FKBP59; AltName: Full=HSP-binding immunophilin; Short=HBI; AltName: Full=Immunophilin FKBP52; AltName: Full=Rotamase; Contains: RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed gi|410499|emb|CAA50231.1| p59 immunophilin [Mus musculus] gi|26350841|dbj|BAC39057.1| unnamed protein product [Mus musculus] gi|148667471|gb|EDK99887.1| FK506 binding protein 4, isoform CRA_b [Mus musculus] Length = 458 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 35/84 (41%), Gaps = 2/84 (2%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFS 74 +++ L ++A+C L ++ + ++ D ++ ++ + L +F Sbjct: 311 MQKVHALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFD 370 Query: 75 KAYEYFNQCSRDFPFAGVARKSLL 98 A F + + +P + A K+ L Sbjct: 371 LARADFQKVLQLYP-SNKAAKTQL 393 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 18/146 (12%), Positives = 43/146 (29%), Gaps = 30/146 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARK-------SLLMSAFVQYSAGK 109 E+ + KE + +A + + + +K S L A Sbjct: 275 ERGTAYFKEGKYKQALLQYKKIVSWLEYESSFSGEEMQKVHALRLASHLNLAMCHLKLQA 334 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + D ++++ Y Sbjct: 335 FSAAIESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 383 Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191 ++ A+ + V R QLA Sbjct: 384 PSNK---AAKTQLAVCQQRTRRQLAR 406 >gi|86145859|ref|ZP_01064187.1| acetyltransferase, putative [Vibrio sp. MED222] gi|85836314|gb|EAQ54444.1| acetyltransferase, putative [Vibrio sp. MED222] Length = 303 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 44/133 (33%), Gaps = 6/133 (4%) Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 G+ ++I D K ++ E+Y S + N A ++I Sbjct: 131 KGLVEMELILGRTMD-TIIKQAIELRKE--EKYQESR---DLLATLLTDENYAAKAHLQI 184 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 Y +G+ AI + L L+ + +A+ L Y +L L EA Sbjct: 185 AWSYDNQGKERQAIEHYVLSLSGVLSSVERFDALFGLASTYRSLGLYAEALGYFEQTMAE 244 Query: 257 YPQGYWARYVETL 269 YP + + Sbjct: 245 YPDSIEVKPFYAM 257 >gi|163848502|ref|YP_001636546.1| protein kinase [Chloroflexus aurantiacus J-10-fl] gi|222526436|ref|YP_002570907.1| TPR repeat-containing serine/threonine protein kinase [Chloroflexus sp. Y-400-fl] gi|163669791|gb|ABY36157.1| protein kinase [Chloroflexus aurantiacus J-10-fl] gi|222450315|gb|ACM54581.1| serine/threonine protein kinase with TPR repeats [Chloroflexus sp. Y-400-fl] Length = 884 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 51/159 (32%), Gaps = 44/159 (27%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAY---EYFN----------QCSRDFPFAGVA-RK 95 TD QRE+Y++A + A +YF Q + + A K Sbjct: 742 DATDENVQRELYQQAETA-----YRAAIARDDYFGFAYNGLGWILQYQDRYAESIEAFEK 796 Query: 96 S-LLM---------SAFVQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQ 143 + L + + + +Y +A S+ + I + Y Y+ +G +Y + Sbjct: 797 ALQLDNENPEIFNGLGWSLFLSDRYPEAESMFKRAIEL-----DSSYTSAYFGLGRTYEE 851 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 Q L + + + P + A V Sbjct: 852 --------QGRWDEALATFQTLKQIAPDYPGLDDAINRV 882 >gi|237737619|ref|ZP_04568100.1| tetratricopeptide TPR_4 [Fusobacterium mortiferum ATCC 9817] gi|229419499|gb|EEO34546.1| tetratricopeptide TPR_4 [Fusobacterium mortiferum ATCC 9817] Length = 191 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 38/82 (46%), Gaps = 6/82 (7%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E A+L + ++S A + + + + +S + Y +Y +A E+ + Sbjct: 42 ELAILLYHKGDYSSAIKIYKKVVD---YKEDKAESFAFLGHLYYENEEYLKAIRYFEKAL 98 Query: 122 TQYPESKNVDYVYYLVGMSYAQ 143 P +V +V++L+G +Y++ Sbjct: 99 DINP---DVAFVHFLLGNAYSR 117 >gi|224585412|ref|YP_002639211.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224469940|gb|ACN47770.1| putative TPR-repeat-containing protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 1150 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 436 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 492 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 493 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 539 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 540 AALAHLNTL----PTSQW 553 >gi|170579035|ref|XP_001894648.1| serine/threonine protein phosphatase 5 [Brugia malayi] gi|158598660|gb|EDP36514.1| serine/threonine protein phosphatase 5, putative [Brugia malayi] Length = 492 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 45/149 (30%), Gaps = 30/149 (20%) Query: 48 LDSVTD-VRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFP-FAGVARKSLLMSAF 102 +D +TD + ++ ++A F +Q + A E + + F +S+ Sbjct: 14 VDGITDLAQRALKIKDEANQFFHDQAYDVAIELYTKAIELDDQQALF--YGNRSM----- 66 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYV--YYLVGMSYAQMIRDVPYDQRATKLMLQ 160 Y A + P Y YY +Y + KL L+ Sbjct: 67 AYLKKELYGSALEDANMALKLDPG-----YSKGYYRRATAYMAL--------GKLKLALK 113 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQL 189 I + N+ A+ + + Sbjct: 114 DYDTIRKAVPNNI---DAKQKYDECQKLM 139 >gi|119485061|ref|ZP_01619446.1| putative deacetylase sulfotransferase [Lyngbya sp. PCC 8106] gi|119457289|gb|EAW38414.1| putative deacetylase sulfotransferase [Lyngbya sp. PCC 8106] Length = 599 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 37/91 (40%), Gaps = 12/91 (13%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + Y++A L + N A + + + +F ++ + K+Q+A S Sbjct: 11 QFYQQAELLFSQGNIEAAISLYQSSIELNPNFSWSYHQ------LGEAFFRLEKWQEAVS 64 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 + + P N + YY +G + +++ + Sbjct: 65 AYDHAVQLNP---NFSWSYYNLGNALSELQQ 92 >gi|88602877|ref|YP_503055.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] gi|88188339|gb|ABD41336.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] Length = 252 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 21/67 (31%), Gaps = 3/67 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + + + A +F++ + P K+ + Y A EE Sbjct: 138 YHRGLALSGRGQYDLAISHFDKILQMNPS---LEKAWSSRGYAYVMEKNYNDALDSFEEA 194 Query: 121 ITQYPES 127 + P + Sbjct: 195 LKINPGN 201 >gi|42572381|ref|NP_974286.1| SPY (SPINDLY); protein N-acetylglucosaminyltransferase/ protein binding / transferase, transferring glycosyl groups [Arabidopsis thaliana] gi|332641540|gb|AEE75061.1| putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY [Arabidopsis thaliana] Length = 732 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 30/87 (34%), Gaps = 7/87 (8%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 D L +R +Y +A + N + A + + +C + P + A ++ L++ Sbjct: 203 DNALSCYEKAALERPMYAEAYCNMDAGNITMAIDAYEECLKIDPDSRNAGQNRLLAM--N 260 Query: 105 YSAGKYQQAASLGE-----EYITQYPE 126 Y + +P+ Sbjct: 261 YINEGLDDKLFEAHRDWGWRFTRLHPQ 287 >gi|148254358|ref|YP_001238943.1| hypothetical protein BBta_2910 [Bradyrhizobium sp. BTAi1] gi|146406531|gb|ABQ35037.1| hypothetical protein BBta_2910 [Bradyrhizobium sp. BTAi1] Length = 358 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 57/202 (28%), Gaps = 54/202 (26%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 + + L + ++A+ + + A F++ R P Sbjct: 157 PTKPPQTASLPEAPALTDAASYLKRALDRSRLGDLDGAIADFDEAVRLAP---------- 206 Query: 99 MSAFVQ-YSAGK------YQQAASLGEEYITQYPESKNVDYVYYL-VGMSYAQMIRDVPY 150 +A + Y A +++A + + I P + + G++ Q Sbjct: 207 RNADIYRYRARDLGRRGRWERALADYDRAIRLDPNNP----ALFHDRGLALQQ------- 255 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 Q L + R V R Y RG A Sbjct: 256 -QGELDGALIDLDRAVRM------------------------SFSDARLYSDRGAVWLAK 290 Query: 211 PRFQLVLANYSDAEHAEEAMAR 232 R+ LA+++ A + A+A Sbjct: 291 GRYDRALADFNQALKLDPALAV 312 >gi|193068462|ref|ZP_03049424.1| cellulose synthase operon protein C [Escherichia coli E110019] gi|192958113|gb|EDV88554.1| cellulose synthase operon protein C [Escherichia coli E110019] Length = 1157 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 77/237 (32%), Gaps = 38/237 (16%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQY-PESKNVDYVY--YLVG-------MSYAQMIRDV 148 + + AG+ QA + Q+ P Y Y YL G +++ I + Sbjct: 500 RLSQDLWQAGQRSQA-DTLMRNLAQHKPNDPEQVYAYGLYLSGHDQDRAALAH---INSL 555 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEI 196 P Q + +V R S V + G+ A ++ + Sbjct: 556 PRAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTL 609 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 610 ADWAQQRRDYTAARAAYQNVLTLEPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 60/210 (28%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + + P Y L Sbjct: 508 AGQRSQADTLMRNLAQHKPNDPEQVYAYGL 537 >gi|116622202|ref|YP_824358.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116225364|gb|ABJ84073.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 579 Score = 36.2 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 31/104 (29%), Gaps = 16/104 (15%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE-SKN 129 +A E + P + + + A V Y ++ A + I P S Sbjct: 395 GRLEEAREEMSLAQELDPISSIIAR---DLARVHYYRQDFEAALDQCDHTIELNPHFSP- 450 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 Y+++G+ Q + R ++ SP Sbjct: 451 ---AYWILGLVQEQR--------GEFDESVAAFQRAIQISPRSP 483 >gi|332703109|ref|ZP_08423197.1| diguanylate cyclase and serine/threonine protein kinase with TPR repeats [Desulfovibrio africanus str. Walvis Bay] gi|332553258|gb|EGJ50302.1| diguanylate cyclase and serine/threonine protein kinase with TPR repeats [Desulfovibrio africanus str. Walvis Bay] Length = 814 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 42/185 (22%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----VQYSAGKYQQAASLGEEYITQYPE 126 +A F + P LM+A+ G++++A + E + P Sbjct: 628 GRPEQALTLFEIVAAKHPE-------DLMAAYNLGTTSLRLGEFERARAAFERCLKLKPG 680 Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 VY S ++ + D Y+ + + Sbjct: 681 H-----VY-----SLIRLGQLAERDNDLPTAGEYYLR-----------ASETKIGRILTM 719 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 LA ++ GR+ R Q ++ N + A+ + + Y+ E Sbjct: 720 RHLARLDLAEGRFEEARE------NLHQALILN----PYDAMAVHLMAKLYLEAGEDPEI 769 Query: 247 REVVS 251 E ++ Sbjct: 770 AETLA 774 >gi|307168162|gb|EFN61441.1| Tetratricopeptide repeat protein 37 [Camponotus floridanus] Length = 1299 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 15/132 (11%), Positives = 40/132 (30%), Gaps = 18/132 (13%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + L + + ++A + R P + +S A G + A + + Sbjct: 554 GLQHLDQGDATEAIKALQHVIRADPNDNHSWES---LADAYLVRGAHTSALKSYQRALQL 610 Query: 124 YPESKNVDYVYY-LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG--ARF 180 P Y ++ ++ +++ K + I+E A+ Sbjct: 611 SPG------ALYPMIQLANIKLL------IGQHKEAKEDFENILENDKKYILALKGLAQA 658 Query: 181 YVTVGRNQLAAK 192 + + + +A Sbjct: 659 CLGLAKENIAKH 670 >gi|297261551|ref|XP_001098079.2| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4 isoform 2 [Macaca mulatta] Length = 459 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 46/146 (31%), Gaps = 30/146 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRD-----FPFAGVARKSL-------LMSAFVQYSAGK 109 E+ ++ KE + +A + + + A+K+ L A Sbjct: 275 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSSEEAQKAQALRLASHLNLAMCHLKLQA 334 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + +L ++++ Y Sbjct: 335 FSAAIESCNKALELDSNNEKG---LFRRGEAHLAVND--------FELARADFQKVLQLY 383 Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191 N+ A+ + V R QLA Sbjct: 384 PNNK---AAKTQLAVCQQRIRRQLAR 406 >gi|205359552|ref|ZP_02830561.2| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205344384|gb|EDZ31148.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] Length = 1150 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 436 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 492 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 493 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 539 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 540 AALAHLNTL----PTSQW 553 >gi|198416412|ref|XP_002123452.1| PREDICTED: similar to tetratricopeptide repeat domain 26, partial [Ciona intestinalis] Length = 407 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 9/63 (14%) Query: 68 LKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 N+ +A F ++F A K L A + Y A EY+ Q+ Sbjct: 161 FMRGNYEEAINSFKHLLNLDKNFA----ALKVYL--AMCYFKLEYYDVAQDYLSEYLQQH 214 Query: 125 PES 127 P S Sbjct: 215 PGS 217 >gi|161505841|ref|YP_001572953.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867188|gb|ABX23811.1| hypothetical protein SARI_04018 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 1172 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 458 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 514 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 515 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 561 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 562 AALAHLNTL----PTSQW 575 >gi|197117965|ref|YP_002138392.1| lipoprotein [Geobacter bemidjiensis Bem] gi|197087325|gb|ACH38596.1| lipoprotein, putative [Geobacter bemidjiensis Bem] Length = 71 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 22/44 (50%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101 +E+++ A K+ N A + + + +P + VA+++ A Sbjct: 24 KELFDTAQFEEKQNNREHAKQLYQEIVNKYPDSPVAKQAQERLA 67 >gi|50417750|gb|AAH77978.1| LOC446236 protein [Xenopus laevis] Length = 938 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 99/278 (35%), Gaps = 43/278 (15%) Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62 A L RA E + ++T +++A + E S +Y + + + + Y Sbjct: 476 ASLDRAKAEAEHDEHYYNSISVTTSYNLARLYEGLCEFHESEKLYKNILREHPNYVDCYL 535 Query: 63 K-AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + + + NF +A ++F + ++D P + L A ++ E Sbjct: 536 RLGAMARDKGNFYEASDWFKEALQINQDHP-DAWSLIGNLHLA-----KQEWGPGQKKFE 589 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ----RATKLMLQYMSRIVERYTNSP- 173 + Q P ++N Y +G + Q + D+ R L +++ +S Sbjct: 590 RILKQ-PSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRN--DSKN 646 Query: 174 ---------------YVKGARFYVTVGRNQLAAKE---VEIGRYYLKRGEYVAAIPRFQL 215 YV+ AR R A + + Y+++ +Y++A+ ++ Sbjct: 647 LFAANGIGAVLAHKGYVREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYEN 706 Query: 216 VLANY---SDAEHAEEAMARLVEAYVALALMDEAREVV 250 L + + E + L A + E ++++ Sbjct: 707 CLRKFYKHQNT----EVLLYLARALFKCGKLQECKQIL 740 >gi|17979432|gb|AAL49858.1| putative TPR repeat nuclear phosphoprotein [Arabidopsis thaliana] Length = 740 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 34/194 (17%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 K L L + A + F P +LL A V+++ G++ ++ L + + Sbjct: 134 KGQLLLAKGEIDNALQAFKIVLDTAPDN---VPALLGQASVEFNRGRFSESLQLYKRALQ 190 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 +P V +G+ ++ Q R+++ ++ A + Sbjct: 191 VFPGCPAA--VRLGIGLCRYKL--------GQLDKARQAFDRVLQLDPDNVEALVALGIM 240 Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 + N IG +++G + R Q Y + A+ L + Sbjct: 241 DLQAND------SIG---MRKG-----MDRMQQAFEIYP---YCASALNYLANHFFFTGQ 283 Query: 243 ----MDEAREVVSL 252 +++ Sbjct: 284 HFLVEQLTETALAV 297 >gi|65316976|ref|ZP_00389935.1| COG1464: ABC-type metal ion transport system, periplasmic component/surface antigen [Bacillus anthracis str. A2012] Length = 273 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 25/66 (37%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 +Q+ K LT S ++ L + + + L E+ EKA L+++ Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60 Query: 76 AYEYFN 81 + F Sbjct: 61 EVKKFQ 66 >gi|323182682|gb|EFZ68084.1| cellulose synthase operon protein C [Escherichia coli 1357] Length = 1157 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 77/237 (32%), Gaps = 38/237 (16%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQY-PESKNVDYVY--YLVG-------MSYAQMIRDV 148 + + AG+ QA + Q+ P Y Y YL G +++ I + Sbjct: 500 RLSQDLWQAGQRSQA-DTLMRNLAQHKPNDPEQVYAYGLYLSGHDQDRAALAH---INSL 555 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEI 196 P Q + +V R S V + G+ A ++ + Sbjct: 556 PRAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTL 609 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 610 ADWAQQRRDYTAARAAYQNVLTLEPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 60/210 (28%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + + P Y L Sbjct: 508 AGQRSQADTLMRNLAQHKPNDPEQVYAYGL 537 >gi|322617883|gb|EFY14776.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] Length = 1150 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 436 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 492 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 493 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 539 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 540 AALAHLNTL----PTSQW 553 >gi|291240364|ref|XP_002740083.1| PREDICTED: CG4341-like [Saccoglossus kowalevskii] Length = 825 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 61/195 (31%), Gaps = 41/195 (21%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-MSAFVQYSAGKYQQAASLGE 118 +Y L ++ + +A E F + R P +SL M G+Y++A S Sbjct: 597 LYNLGRLKHDQKKYEEAVEAFKESIRRRP-DYYPPQSLYNMLGDSLSKLGQYKEAES--- 652 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 ++L +S V D L ++ I R+ A Sbjct: 653 ---------------WFLKSLS-------VKSDHVPAYLTYAHLLDITGRH------TEA 684 Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARL---V 234 + + E E Y G++ A I +F+ Y A + + + Sbjct: 685 TDMLNKALDL----EPENAGVYQHYGQHFAEIAKFKEAADMYRKAIKLRPDDFEIMFNGA 740 Query: 235 EAYVALALMDEAREV 249 A+ L +A Sbjct: 741 NAHRQAGLNADAEMY 755 >gi|254462503|ref|ZP_05075919.1| TPR domain protein [Rhodobacterales bacterium HTCC2083] gi|206679092|gb|EDZ43579.1| TPR domain protein [Rhodobacteraceae bacterium HTCC2083] Length = 207 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 40/134 (29%), Gaps = 16/134 (11%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 + ++++ L A+E+ + P A M A Y Y Sbjct: 82 SGSASADLLFKRGRDALGANKPKVAFEHLTALTDHAP--DFAE-GWHMRASALYQQELYG 138 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGM-SYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A E +T P+ + + G+ + + + D + +++ + Sbjct: 139 PALEDLERALTLSPQHFDA-----IQGLGAIFEQLGDRKR-------AYEVYEQVLAIHP 186 Query: 171 NSPYVKGARFYVTV 184 + V A + Sbjct: 187 HHTTVLEAMERLEA 200 >gi|205360321|ref|ZP_02682619.2| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205350236|gb|EDZ36867.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 1150 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 436 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 492 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 493 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 539 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 540 AALAHLNTL----PTSQW 553 >gi|205357600|ref|ZP_02571940.2| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205330678|gb|EDZ17442.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] Length = 1150 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 436 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 492 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 493 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 539 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 540 AALAHLNTL----PTSQW 553 >gi|197300669|ref|ZP_02660276.2| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197291266|gb|EDY30618.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 1150 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 436 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 492 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 493 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 539 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 540 AALAHLNTL----PTSQW 553 >gi|220927089|ref|YP_002502391.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium nodulans ORS 2060] gi|219951696|gb|ACL62088.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium nodulans ORS 2060] Length = 988 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 15/114 (13%), Positives = 36/114 (31%), Gaps = 14/114 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + + + + +A ++Q R P +A F S G+Y +A + ++ + Sbjct: 65 NRGFAYQSKGEYDRAIADYDQVLRLNPKNVIAYN---NRGFAYQSKGEYDRAIADYDQAL 121 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 P+ Y + DV + + S+ + + Sbjct: 122 QLNPK-----YA------IAYRNRGDVFRSKGEHDRAIADYSQALRFNPKYIFA 164 Score = 35.9 bits (82), Expect = 6.2, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 42/141 (29%), Gaps = 23/141 (16%) Query: 62 EKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + F + + +A ++Q + FA AR AF S Y +A + + Sbjct: 269 NRGDAFRSKGEYDRAIADYDQALLLDPKYTFAYTAR------AFAFQSKRDYDRALADYD 322 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 + + P+S ++ + D + + + + Sbjct: 323 QALRLDPKS-----------VAAYRNRGDFFRSKGDYDRAIADYDEALRLDPKNKLAYNN 371 Query: 179 RFYVTVGRNQLAAKEVEIGRY 199 R V +N + I + Sbjct: 372 RGLVFQSKN---EYNLAIADF 389 >gi|148667470|gb|EDK99886.1| FK506 binding protein 4, isoform CRA_a [Mus musculus] Length = 455 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 35/84 (41%), Gaps = 2/84 (2%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFS 74 +++ L ++A+C L ++ + ++ D ++ ++ + L +F Sbjct: 308 MQKVHALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFD 367 Query: 75 KAYEYFNQCSRDFPFAGVARKSLL 98 A F + + +P + A K+ L Sbjct: 368 LARADFQKVLQLYP-SNKAAKTQL 390 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 18/146 (12%), Positives = 43/146 (29%), Gaps = 30/146 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARK-------SLLMSAFVQYSAGK 109 E+ + KE + +A + + + +K S L A Sbjct: 272 ERGTAYFKEGKYKQALLQYKKIVSWLEYESSFSGEEMQKVHALRLASHLNLAMCHLKLQA 331 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + D ++++ Y Sbjct: 332 FSAAIESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 380 Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191 ++ A+ + V R QLA Sbjct: 381 PSNK---AAKTQLAVCQQRTRRQLAR 403 >gi|145219113|ref|YP_001129822.1| hypothetical protein Cvib_0298 [Prosthecochloris vibrioformis DSM 265] gi|145205277|gb|ABP36320.1| conserved hypothetical protein [Chlorobium phaeovibrioides DSM 265] Length = 690 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 17/101 (16%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 L +F A C +SS E+Y KA + +++A E + Sbjct: 12 MAVLGMFLLFAGCSSPDNSGESS--------------SEMYAKASDLGRHGQYARAIELY 57 Query: 81 N---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 P + A +L+ +++ G Y A + E Sbjct: 58 GRGLALESLDPPSDAAVVALVSKRWLEGLTGSYDAALATTE 98 >gi|154345117|ref|XP_001568500.1| MAP kinase kinase-like protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065837|emb|CAM43615.1| putative protein kinase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1416 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 17/146 (11%), Positives = 44/146 (30%), Gaps = 40/146 (27%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEE 119 E+ K + +A Y+ Q P + +S F ++ +++++A+ + Sbjct: 131 EEGNEAFKAGRYHEAIRYYTQAIEVDPDSEFIYTNRS-----FAYFNIKEFEKSAADAAK 185 Query: 120 -------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 + + Y +G++ + D + + + Sbjct: 186 AVEINANFFKGH----------YRLGLAQMSL-NDFGHAMDSLRRAWAL----------- 223 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGR 198 A R +A E ++ R Sbjct: 224 --APDANK--EAIRVAMAKCESKMAR 245 >gi|118349353|ref|XP_001033553.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89287902|gb|EAR85890.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 644 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 40/90 (44%), Gaps = 14/90 (15%) Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYS 106 + + + + +Y +K+Q ++ A +Y N + F + ++L + A+ Y Sbjct: 4 IKQIPEGERTKTIY----TLIKDQKYNDAIQYLNYELQ----FTPRS-RALSLLAYCYYM 54 Query: 107 AGKYQQAASLGEEYITQYPESKNVD-YVYY 135 + A+ + E+ + YP +VD Y Y Sbjct: 55 NQDFSNASKIYEQLVNYYP---DVDEYKLY 81 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 58/151 (38%), Gaps = 28/151 (18%) Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY-TNSPYVKGARFYVTV 184 +K++D L ++ D A + L+ +E+Y V A+ + Sbjct: 369 ANKHIDQ---LRKITKNIQDARQQRDSDAIRRALKEFDECIEKYIP----VLMAQAKIYW 421 Query: 185 ------GRNQL--------AAKE---VEIGR-YYLKRGEYVAAIPRFQLVLANYSDAEHA 226 +L A E + + ++++ +Y A+ ++ ++ Y+D Sbjct: 422 DRENYAAVEKLFKQSAEFCADHETWKLNVANVFFVQDNKYREALRYYEPIVKKYNDNLLQ 481 Query: 227 EEAMAR--LVEAYVALALMDEAREVVSLIQE 255 +AM L +Y+ + ++A E++ ++ Sbjct: 482 LQAMVIANLCVSYIMVNQNEDAEELMRKLER 512 >gi|85858724|ref|YP_460926.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB] gi|85721815|gb|ABC76758.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus SB] Length = 563 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 68/215 (31%), Gaps = 47/215 (21%) Query: 64 AVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +L++ N+ A F + + Y +Y +A ++ Sbjct: 252 GEFYLRQGNYQAAEAVFRDSLTIDDS------NKDVHFTLGLLYYEQQRYDRAIEAFQKA 305 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + P + + YY + Y + Q+ + ++ +S + AR Sbjct: 306 LKLAPSDQKI---YYFLASVYDE--------QQENDKAMDTYGKVA---PDSEWYGNARI 351 Query: 181 YVTVGRNQLAAKEVEI--------------------GRYYLKRGEYVAAIPRFQLVLANY 220 + + + + I G Y ++ +Y A + L ++ Sbjct: 352 RMGMLLREEGRIDAAISLIRETLSTEAKAPNLYAYLGSLYQEKAQYPEAENLLKEGLKDF 411 Query: 221 SDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQ 254 + EE L E Y + +++ +E+ +++ Sbjct: 412 PRS---EELHYGLGEVYSKMDRFEDSIKEMKRVLE 443 >gi|71281219|ref|YP_269687.1| TPR domain-containing protein [Colwellia psychrerythraea 34H] gi|71146959|gb|AAZ27432.1| TPR domain protein [Colwellia psychrerythraea 34H] Length = 778 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 45/117 (38%), Gaps = 21/117 (17%) Query: 62 EKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 + ++ + + +A + F + F ++ L + V Y G+ Q++ + + Sbjct: 606 NRGIIAAYQGQYDQAIKAFKQGIAIEKHF------ARTYLNLSQVYYQRGENQKSIEILQ 659 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT-NSPY 174 + + P+ ++ Y G++Y ++ V Q ++ + NS Y Sbjct: 660 QGKSANPDDASLPYNL---GLAYIRVQDKV--------KAAQALAIATQLAPQNSHY 705 >gi|50962841|ref|NP_796342.2| transmembrane and TPR repeat-containing protein 2 [Mus musculus] gi|81909357|sp|Q56A06|TMTC2_MOUSE RecName: Full=Transmembrane and TPR repeat-containing protein 2 gi|62132956|gb|AAH92226.1| Transmembrane and tetratricopeptide repeat containing 2 [Mus musculus] gi|187953887|gb|AAI38363.1| Transmembrane and tetratricopeptide repeat containing 2 [Mus musculus] gi|187953889|gb|AAI38364.1| Transmembrane and tetratricopeptide repeat containing 2 [Mus musculus] Length = 836 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 20/99 (20%) Query: 62 EKAVLFLKEQNFSKAYEYF--------NQCSRDFPFAGVARKS-----LLMSAFVQYSAG 108 ++ + + +A F A KS L + + G Sbjct: 566 NTGIILMNQGKTEEARRTFLKCSEIPDENLKD-----PHAHKSSVTSCLYNLGKLYHEQG 620 Query: 109 KYQQAASLGEEYITQYPESKNVDYVYY-LVGMSYAQMIR 146 +Y++A S+ E I + P Y ++G +Y ++ + Sbjct: 621 RYEEALSVYREAIQKMPRH-FAPQSLYNMMGEAYMRLSK 658 >gi|254230382|ref|ZP_04923765.1| tetratricopeptide repeat domain protein [Vibrio sp. Ex25] gi|262395014|ref|YP_003286868.1| hypothetical protein VEA_004245 [Vibrio sp. Ex25] gi|151937088|gb|EDN55963.1| tetratricopeptide repeat domain protein [Vibrio sp. Ex25] gi|262338608|gb|ACY52403.1| hypothetical protein VEA_004245 [Vibrio sp. Ex25] Length = 760 Score = 36.2 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 68/205 (33%), Gaps = 43/205 (20%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKA-YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 D+ +Y +A L++ A +Y+ + + +L + + + + Sbjct: 189 DLIKAESLYSQAKTMLEDSRSDLALIDYYTAVGEFYLNSKKYNLALSELLYGYWQSIESD 248 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR---IVER 168 A L + +++ + ++R ++Y+S+ + Sbjct: 249 SGARLAK----------------------VNRLLARLFQERRVYDKAIEYLSQAADFYDS 286 Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228 Y +SP + + G Y +G++ A+ + VL + S +++ Sbjct: 287 YPSSPILADVLEQM--------------GDIYFYQGKFNLALVHYFNVLDHESTSKNINR 332 Query: 229 AMAR---LVEAYVALALMDEAREVV 250 + L Y+ L A + + Sbjct: 333 IIKIRLSLAATYLQLYNYALAEQYL 357 >gi|332030604|gb|EGI70292.1| Serine/threonine-protein phosphatase 5 [Acromyrmex echinatior] Length = 492 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 25/148 (16%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFP-----F 89 +G + + ++ + E+Y E+A + K Q + KA E + + P + Sbjct: 1 MGDNGRGDVASVSPATSEDAAKAELYKEEANEYFKNQVYDKAIELYTKAIELNPSVAIYY 60 Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 + + L + + Y+ A L + Y+ YY +Y + Sbjct: 61 GNRSI-AYLRTEYFGYALTDASTAIMLDKNYVK----------GYYRRAAAYMSL----- 104 Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKG 177 KL L +V+ N Sbjct: 105 ---GKFKLALMDYKTVVKARPNDKDASD 129 >gi|328874364|gb|EGG22729.1| hypothetical protein DFA_04859 [Dictyostelium fasciculatum] Length = 541 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 35/123 (28%), Gaps = 16/123 (13%) Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 F A E N + P + A A + + +A + + P ++ Sbjct: 311 GRFDNALEAINTAIKIHPGSVYAHSI---CASIHLRNKEPLKAIDTIDSALRVDPNNE-- 365 Query: 131 DYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 +A+ IR D D K + ++ + + N + Sbjct: 366 ----------FAKTIRADALMDMNRFKESIGLYREVIANIMERDRPDEVNTRIAILHNMI 415 Query: 190 AAK 192 AA Sbjct: 416 AAY 418 >gi|307314342|ref|ZP_07593949.1| cellulose synthase operon C domain protein [Escherichia coli W] gi|306906057|gb|EFN36577.1| cellulose synthase operon C domain protein [Escherichia coli W] gi|315062809|gb|ADT77136.1| cellulose synthase subunit [Escherichia coli W] gi|323376603|gb|ADX48871.1| cellulose synthase operon C domain protein [Escherichia coli KO11] Length = 1157 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 77/237 (32%), Gaps = 38/237 (16%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A + +++A Q P + Sbjct: 443 SLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVW---ITY 499 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQY-PESKNVDYVY--YLVG-------MSYAQMIRDV 148 + + AG+ QA + Q+ P Y Y YL G +++ I + Sbjct: 500 RLSQDLWQAGQRSQA-DTLMRNLAQHKPNDPEQVYAYGLYLSGHDQDRAALAH---INSL 555 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV-GRNQLAAK-----------EVEI 196 P Q + +V R S V + G+ A ++ + Sbjct: 556 PRAQWN-----SNIQELVNRL-QSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTL 609 Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + +R +Y AA +Q VL +A+ L E +A AR ++ + Sbjct: 610 ADWAQQRRDYTAARAAYQNVLTLEPT---NADAILGLTEVDIAAGDTAAARSQLAKL 663 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 60/210 (28%), Gaps = 30/210 (14%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ LK N +A F Q A L A Y A ++ + Sbjct: 356 QQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMA---RKDYPAAERYYQQTL 412 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + N + G++ + + + +S R + Sbjct: 413 RMDSGNTNA-----VRGLANIYRQQS----PEKAEAFIASLSASQRRS-----IDDIERS 458 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEY--VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 + ++LA + +G++ AA+ R +L L + RL + Sbjct: 459 LQ--NDRLAQQ----AEALENQGKWAQAAALQRQRLALD--PGSVWIT---YRLSQDLWQ 507 Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269 +A ++ + + P Y L Sbjct: 508 AGQRSQADTLMRNLAQHKPNDPEQVYAYGL 537 >gi|203287653|ref|YP_002222668.1| hypothetical protein BRE_192 [Borrelia recurrentis A1] gi|201084873|gb|ACH94447.1| uncharacterized conserved protein [Borrelia recurrentis A1] Length = 380 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 76/212 (35%), Gaps = 36/212 (16%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 K++NF KA Y+ +C +L S G Y++A + EEY+ +SK Sbjct: 70 KKRNFDKAIIYYQKCLAKHSNNNY---ALFGLGDCYRSLGDYKKATDVWEEYLKY--DSK 124 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180 N+ V V SY ++ + + Q R++E ++ Y + Sbjct: 125 NIT-VLTRVASSYRKL--------KNFQKSRQSYLRVLELVPDNDYALVGIGHLYYDFKE 175 Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 Y + L E+ IG Y K E+ I F+ L + + A Sbjct: 176 YKEALKYWLKMYEINQVKIDVRLLTSIGNCYRKLKEFSKGIYFFKRALEI---SPNNFYA 232 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + L + Y EA + I +R P+ Sbjct: 233 IFGLADCYRGSKEYAEALKYWLTIIDRDPKNN 264 >gi|197249812|ref|YP_002148544.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197213515|gb|ACH50912.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 1150 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 436 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 492 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 493 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 539 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 540 AALAHLNTL----PTSQW 553 >gi|108759190|ref|YP_631570.1| hypothetical protein MXAN_3373 [Myxococcus xanthus DK 1622] gi|108463070|gb|ABF88255.1| conserved hypothetical protein [Myxococcus xanthus DK 1622] Length = 512 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 6/55 (10%), Positives = 20/55 (36%), Gaps = 3/55 (5%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 L + ++ A + + R ++ ++L + F ++ + A + Sbjct: 231 GRLHYRRGEYTDASAAYERVPR---YSRYWDQALFENGFARFQNEDFGGALGSLQ 282 >gi|94468750|gb|ABF18224.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Aedes aegypti] Length = 285 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 6/91 (6%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82 L ++ + A+C+ + ++D +++ D + + +Y + L +F KA E FN Sbjct: 180 LAVYLNKALCYQKLNDHDEAKDACNEALNIDKKSVKALYRRGQSRLSLGDFEKALEDFNA 239 Query: 83 CSRDFPFAGVARKSLLMSA-FVQYSAGKYQQ 112 P K+ L A + Y + Sbjct: 240 VREIEPEN----KAALNQATICKQKIKDYNE 266 >gi|117925010|ref|YP_865627.1| hypothetical protein Mmc1_1712 [Magnetococcus sp. MC-1] gi|117608766|gb|ABK44221.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1] Length = 595 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 44/121 (36%), Gaps = 13/121 (10%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105 V D + ++A +++F +A + P K+LL+ A Sbjct: 125 VERDPAMGGALAESLLQQAQHEFAQEHFVEAAVLLTEAQCYRPNH---MKTLLLQARAWL 181 Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +G +AA+ + P N+ V++ +G AQ D+ + ++ + Sbjct: 182 KSGDLAKAATGYGRLLELNP---NLPEVHHTLGTILAQ-------DKAHAQQAAHHLRQA 231 Query: 166 V 166 V Sbjct: 232 V 232 >gi|328950327|ref|YP_004367662.1| Tetratricopeptide TPR_1 repeat-containing protein [Marinithermus hydrothermalis DSM 14884] gi|328450651|gb|AEB11552.1| Tetratricopeptide TPR_1 repeat-containing protein [Marinithermus hydrothermalis DSM 14884] Length = 496 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 17/62 (27%), Gaps = 3/62 (4%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 +L+ + A F + A + Y G + A E+ Sbjct: 46 GRAYLEAGRYEDAARLFEDVLALD-YNNFA--AHFGLGLAHYRQGNLKAARFEFEQLTHL 102 Query: 124 YP 125 YP Sbjct: 103 YP 104 >gi|300718975|ref|YP_003743778.1| cellulose synthase operon protein C [Erwinia billingiae Eb661] gi|299064811|emb|CAX61931.1| cellulose synthase operon protein C [Erwinia billingiae Eb661] Length = 1269 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 51/166 (30%), Gaps = 28/166 (16%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A L N +A Q ++ FP R L A + G AA + + Sbjct: 464 QAKQALAAGNTQQAIAILQQGTQRFPTDPWLR---LDLARIYQQQGNTSLAAGIMQ---- 516 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT---NSPYVKGAR 179 P +N G S ++ + + Q + ++ R S ++ Sbjct: 517 --PAFRN--------GASNNEIYAGALFASES--GAWQQVQTLIARIPARSQSSEMRELS 564 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225 ++ + + YL +G AA + + N + Sbjct: 565 RRANF------NLQMAVAQQYLAQGSNAAAANTLKALAVNPPENPA 604 >gi|288960117|ref|YP_003450457.1| hypothetical protein AZL_a03820 [Azospirillum sp. B510] gi|288912425|dbj|BAI73913.1| hypothetical protein AZL_a03820 [Azospirillum sp. B510] Length = 484 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 17/148 (11%), Positives = 51/148 (34%), Gaps = 16/148 (10%) Query: 27 FFSIAVCFLVGWERQSSRDVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85 +IA+ L ++Y + D ++ + + + +A++ ++ Sbjct: 13 ALAIALDHLKAGRLAEGEELYARILDADPGNAEALHRMGFIAGRRGDMDRAFDLLSRSVE 72 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145 P A +L + + A + ++A + P+ + DY ++ + Sbjct: 73 RAPDAD----ALFNLGTLHHRALRTEEAIVAYRRALALRPDFPDCDYHL-------SEAL 121 Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSP 173 + L + +++R+ + P Sbjct: 122 QGAGR----LDEALAALDTLLDRHPHYP 145 >gi|282163899|ref|YP_003356284.1| hypothetical protein MCP_1229 [Methanocella paludicola SANAE] gi|282156213|dbj|BAI61301.1| hypothetical protein [Methanocella paludicola SANAE] Length = 244 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 21/138 (15%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 K +L+ + +A F++ ++ LL A G + +A E+ + Sbjct: 10 KGMLYASIGRYDEAAAIFDRM------GEISPDLLLCEAGALSRMGSFARALECIEKALE 63 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR--- 179 + P S + ++L G+ Y Q L Y+ ++ + Sbjct: 64 KNPISPD---AWFLKGLLYYQR--------GNLMAALGYLEEALDIDPKHVEARSVAGNC 112 Query: 180 -FYVTVGRNQLAAKEVEI 196 +Y+ + L E I Sbjct: 113 HYYMGEYKEALEYYETAI 130 >gi|269104631|ref|ZP_06157327.1| tPR repeat protein SEL1 subfamily [Photobacterium damselae subsp. damselae CIP 102761] gi|268161271|gb|EEZ39768.1| tPR repeat protein SEL1 subfamily [Photobacterium damselae subsp. damselae CIP 102761] Length = 333 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 18/132 (13%) Query: 19 LYKFALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQRE-VYEKAV----LFLKEQN 72 L +T+F S A + + +E +S D+ + + E +Y A + ++N Sbjct: 7 LLSIGITLFLSTPAFAYDLSYEEYTSEDLAVVKKAETSTDAEVIYNAANILMSESMMQEN 66 Query: 73 FSKAYEYFNQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 + +Y NQ + P K+ L A Y Y +A L + ES Sbjct: 67 IEQGIKYLNQLAENNHP------KATLTLADYYYEEEDYTKALKLYHQL-----ESSQDP 115 Query: 132 YVYYLVGMSYAQ 143 YV Y +G+ Y Sbjct: 116 YVLYSLGIMYFD 127 >gi|194469945|ref|ZP_03075929.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205358577|ref|ZP_02657510.2| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194456309|gb|EDX45148.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333258|gb|EDZ20022.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 1150 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 436 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 492 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 493 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 539 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 540 AALAHLNTL----PTSQW 553 >gi|170581356|ref|XP_001895649.1| TPR Domain containing protein [Brugia malayi] gi|158597331|gb|EDP35505.1| TPR Domain containing protein [Brugia malayi] Length = 1352 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 48/142 (33%), Gaps = 18/142 (12%) Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKG------ARFY-VTVGRNQLAA-KE---- 193 R D+ + L S+ ++ + + + A+ + R+ A +E Sbjct: 823 RKKEKDKDYRERALMMYSKALKVHPKNIWAANGIGCILAQKGAIQEARDIFAQVREATAD 882 Query: 194 -----VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 + I Y+++ +YVAAI + + ++ + L A+ E R Sbjct: 883 FSDVWINIAHVYMEQKQYVAAIQMYDNCIKKFNRHNDVS-LLLYLARAHYKAGKFSECRH 941 Query: 249 VVSLIQERYPQGYWARYVETLV 270 ++ P ++ V Sbjct: 942 ILEKAICEAPDNMMLKFNHAFV 963 >gi|148244624|ref|YP_001219318.1| hypothetical protein COSY_0475 [Candidatus Vesicomyosocius okutanii HA] gi|146326451|dbj|BAF61594.1| hypothetical protein [Candidatus Vesicomyosocius okutanii HA] Length = 221 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 16/114 (14%), Positives = 42/114 (36%), Gaps = 14/114 (12%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 ++ + + Y+NS Y +++ + YL + ++ A F + Sbjct: 111 QAIKLFKQYLVDYSNSSYTSDVYYWL--------------AKSYLAKEDFHNAKNTFVVF 156 Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270 ++ L + Y+ L D+A+ ++S + ++P + L+ Sbjct: 157 QQQNPLHYKFSNSLFDLAKVYIELNKQDKAQGLLSTMLVKFPSHKAINRAKQLL 210 Score = 35.5 bits (81), Expect = 8.1, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 28/84 (33%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103 ++ + + + VY +A L + + +A + F Q D+ + A Sbjct: 80 KETSFKTREYDKKAKRVYTQARSLLIIEQYDQAIKLFKQYLVDYSNSSYTSDVYYWLAKS 139 Query: 104 QYSAGKYQQAASLGEEYITQYPES 127 + + A + + Q P Sbjct: 140 YLAKEDFHNAKNTFVVFQQQNPLH 163 >gi|115767221|ref|XP_799094.2| PREDICTED: similar to KIAA0155, partial [Strongylocentrotus purpuratus] Length = 1101 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 50/128 (39%), Gaps = 18/128 (14%) Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG-------ARFYVTVGRNQLAA- 191 + Q RD ++R + L +++ + + Y + Y+ R+ + Sbjct: 599 TLYQPTRDKEKEKRHQERALARYKQVLRSDSRNIYAANGIGCILAMKGYIREARDVFSQV 658 Query: 192 KE---------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242 +E + + Y+++ +Y++AI ++ + + H ++ L AY Sbjct: 659 REATADVSDVWLNLAHIYVEQKQYISAIQMYENCIKKFFKF-HNTTVLSFLARAYFKTGK 717 Query: 243 MDEAREVV 250 + E R+ + Sbjct: 718 LKECRQTL 725 >gi|222053746|ref|YP_002536108.1| Exostosin family protein [Geobacter sp. FRC-32] gi|221563035|gb|ACM19007.1| Exostosin family protein [Geobacter sp. FRC-32] Length = 794 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 22/77 (28%), Gaps = 11/77 (14%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYE-YFNQCSRDFPFAGVARK---SLLMSAFVQYSAGKY 110 + Y ++ A Y +A + L +G+ Sbjct: 2 TSAEDFYRSGNANATRGDYDGAIAAYLQALQ-------LAPRQPAVLNNLGLAYVESGRL 54 Query: 111 QQAASLGEEYITQYPES 127 +A + E +I PE+ Sbjct: 55 DEAKVIFERFIALDPEN 71 >gi|59711571|ref|YP_204347.1| hypothetical protein VF_0964 [Vibrio fischeri ES114] gi|59479672|gb|AAW85459.1| predicted protein [Vibrio fischeri ES114] Length = 252 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 15/123 (12%) Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 Q D+ ++ + V Y +S Y A +++ G+ Y Sbjct: 136 YQNAVDLILKEKNYAGATKAFQEFVTAYPDSVYSSNAHYWL--------------GQLYF 181 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + V A F V+ +Y+D+ +A+ +L E A++ + YP Sbjct: 182 AQKNDVEAAKSFAKVV-SYADSNKRADALLKLGEVAKRNNNNAAAKKYYQKVVNEYPDST 240 Query: 262 WAR 264 A+ Sbjct: 241 TAK 243 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 50/148 (33%), Gaps = 14/148 (9%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLF-LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99 ++ + + + Y+ AV LKE+N++ A + F + +P + + + Sbjct: 116 EAKPEATEGAYAADTNENAAYQNAVDLILKEKNYAGATKAFQEFVTAYPDSVYSSNAHYW 175 Query: 100 SAFVQYSAGKYQQAASLGEEYITQ--YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157 + ++ +A + + Y +S +G +V Sbjct: 176 LGQLYFAQKNDVEA---AKSFAKVVSYADSNKRADALLKLG--------EVAKRNNNNAA 224 Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVG 185 +Y ++V Y +S K A + Sbjct: 225 AKKYYQKVVNEYPDSTTAKTAASKLESL 252 >gi|30062802|ref|NP_836973.1| tetratricopeptide repeat protein [Shigella flexneri 2a str. 2457T] gi|30041050|gb|AAP16780.1| putative heat shock protein [Shigella flexneri 2a str. 2457T] gi|281600703|gb|ADA73687.1| putative heat shock protein [Shigella flexneri 2002017] gi|313649468|gb|EFS13899.1| tetratricopeptide repeat family protein [Shigella flexneri 2a str. 2457T] gi|332757935|gb|EGJ88262.1| tetratricopeptide repeat family protein [Shigella flexneri 4343-70] gi|332759437|gb|EGJ89745.1| tetratricopeptide repeat family protein [Shigella flexneri 2747-71] gi|332760376|gb|EGJ90666.1| tetratricopeptide repeat family protein [Shigella flexneri K-671] gi|332767516|gb|EGJ97710.1| tetratricopeptide repeat family protein [Shigella flexneri 2930-71] gi|333004596|gb|EGK24120.1| tetratricopeptide repeat family protein [Shigella flexneri VA-6] gi|333005457|gb|EGK24975.1| tetratricopeptide repeat family protein [Shigella flexneri K-218] gi|333007619|gb|EGK27097.1| tetratricopeptide repeat family protein [Shigella flexneri K-272] gi|333019119|gb|EGK38409.1| tetratricopeptide repeat family protein [Shigella flexneri K-304] Length = 389 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 36/186 (19%) Query: 64 AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + +A + FNQ DF + + + A ++Q+A + E + Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQA-----TSEWQKAIDVAERLV 168 Query: 122 TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + + V+ ++ + + + D+ K NS Sbjct: 169 KLGKDKQRVEIAHFYCELALQHM-ASDDLDRAMTLLKKGAAADK-------NS------- 213 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 A + +GR ++ +GEY A+ Q V++ D E E + L Y Sbjct: 214 ----------ARVSIMMGRVFMAKGEYAKAVESLQRVIS--QDRELVSETLEMLQTCYQQ 261 Query: 240 LALMDE 245 L E Sbjct: 262 LGKTAE 267 >gi|16330801|ref|NP_441529.1| hypothetical protein sll1882 [Synechocystis sp. PCC 6803] gi|1653294|dbj|BAA18209.1| sll1882 [Synechocystis sp. PCC 6803] Length = 274 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 64/229 (27%), Gaps = 52/229 (22%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASLG 117 + L+ + KA F Q A+ +Y A + Sbjct: 62 EGFDELESGSPLKAIAIFTQVID--------TDDQNADAYNLRGVAYMVIEQYTDALADF 113 Query: 118 EEYITQYPESKNVDYVYYLVG-----MSYAQ-MIRDVP----YDQRAT------------ 155 ++ I P+ + Y+ ++ Q I D D + Sbjct: 114 DQAIALNPKDPAI---YFNRANVHGVLNNYQGAIDDCSQGILLDPQDVDLLICRGQAQLG 170 Query: 156 ----KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY--LKRGEYVAA 209 + + R +E S A ++ + + E + ++ Y A Sbjct: 171 LEQPRQAIPDFDRAIELDPRSE---EAHYFRGLAYAMVNNYERALADLNRTIRLNPYNAD 227 Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVAL---ALMDEAREVVSLIQE 255 + + + EE++ +++A L + A E+ L+ Sbjct: 228 AFILRAGIRSEQG--EVEESLEDMIQAINLLDRQGESERATEIRQLLGY 274 >gi|186684525|ref|YP_001867721.1| hypothetical protein Npun_F4407 [Nostoc punctiforme PCC 73102] gi|186466977|gb|ACC82778.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102] Length = 267 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 67/215 (31%), Gaps = 28/215 (13%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ-REVYEKAVLFLKEQNFSKAYEYFNQC 83 I +++ + GW + Q E +A + +F+ A Y+ + Sbjct: 4 LIGIFLSLLLVFGWATPVMAQSQPPITQEQLKQGDEWANQAFAATNQGDFATAETYWTKI 63 Query: 84 SRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 FP + + + S K Q+A + + I P + Y ++ Sbjct: 64 IEQFPTNAGAWSNR-----GNSRVSQNKLQEAIADYNKAIELAPNVTD-PY------LNR 111 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 + + + + ++E N A + L E I Y Sbjct: 112 GAALEGLGK----WDDAIADYNYVLELDPND---AMAYNNRGNAKTGLGKWEDAIADY-- 162 Query: 202 KRGEYVA---AIPRFQLVLANYSDAEHAEEAMARL 233 K+ +A A R LA Y + E+A+ + Sbjct: 163 KKSNEIAPNFAFARANYALALY-ETGQKEQAIREM 196 >gi|332664594|ref|YP_004447382.1| hypothetical protein Halhy_2640 [Haliscomenobacter hydrossis DSM 1100] gi|332333408|gb|AEE50509.1| Tetratricopeptide TPR_2 repeat-containing protein [Haliscomenobacter hydrossis DSM 1100] Length = 803 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 31/73 (42%), Gaps = 11/73 (15%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQC-----SRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 ++ A + ++ A + + + +P ++ L A + + G+Y+ A S Sbjct: 61 FKIAESARQFNSYRIAAQNYVKVLGSPDKAQYP------EARLRMAEMLHKLGEYKSALS 114 Query: 116 LGEEYITQYPESK 128 +EY+ P++ Sbjct: 115 SYQEYLQANPQAP 127 >gi|258591654|emb|CBE67955.1| protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 128 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 12/99 (12%) Query: 100 SAFVQYSAG---------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 +A Y G QA + E+ I + +Y +G+SY + Sbjct: 32 TADAHYELGVSYHEQMFVNLDQAIAEYEQAIKL---RNDFAEAHYHLGLSYHTKAKLGAD 88 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189 D+ + L+ + + AR + +L Sbjct: 89 DKVLYRKALKEYKAYLTLLPKGSLAEKARQNIKAVEQRL 127 >gi|283780878|ref|YP_003371633.1| hypothetical protein Psta_3109 [Pirellula staleyi DSM 6068] gi|283439331|gb|ADB17773.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068] Length = 298 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 29/102 (28%), Gaps = 14/102 (13%) Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133 +A Y++Q S P A Q+S G +A + + I P+ Sbjct: 82 EEAANYYSQLSAKEPHKPWPH---YHLAATQHSQGNIAEALAGYSKVIQLDPQFPA---A 135 Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 Y G Y DQ + + + S Sbjct: 136 YLSRGNIYI--------DQGDADRAISDFTTALRLKPESSEA 169 >gi|255639295|gb|ACU19945.1| unknown [Glycine max] Length = 340 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 29/110 (26%), Gaps = 18/110 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + K + +A E F P A + A + Q A S EE Sbjct: 229 GLQLYKNGRYDEALEKFESILGSKPEPEEAAVASYNVACCYSKLNQIQAALSSLEE--AL 286 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL-MLQYMSRIVERYTNS 172 + + + + D + +++R+ S Sbjct: 287 N---------------AGFEDFKRIRTDPDLANARASEEFDPLLKRFDES 321 >gi|229087634|ref|ZP_04219763.1| TPR domain protein [Bacillus cereus Rock3-44] gi|228695675|gb|EEL48531.1| TPR domain protein [Bacillus cereus Rock3-44] Length = 515 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 15/82 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 E+A +++ +A ++D+P ++G A + +G +QA L E Sbjct: 167 EEANRYIRNGQLEEAIATLEVVTKDYPEFWSGYN-----NLAIAHFQSGNVEQALKLTEM 221 Query: 120 YITQYPESKNVDYVYYLVGMSY 141 + + P + + + Sbjct: 222 ILEKNPGN--------MHALCN 235 >gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa] gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa] Length = 720 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 55/159 (34%), Gaps = 26/159 (16%) Query: 13 EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDV-YLDSVTDVRYQREVYEKAVLFL-KE 70 + A + ++T+ ++ C G + + + + + + E Y + L + Sbjct: 436 QMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRA 495 Query: 71 QNFSKAYEYFNQCSRDFPFAG----VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 S+A + PF+ A +LL + G + A +++ P Sbjct: 496 GKLSEA----ERLIDTMPFSPGSAAWA--ALLGACRKY---GNMELAEKAANQFLQLEPT 546 Query: 127 SKNVDYVYYLVGMSY--------AQMIRDVPYDQRATKL 157 + V Y+ ++ Y A IR + D+ K Sbjct: 547 N-AVPYI--MLASMYSAARKWEEAARIRKLMRDRGIRKK 582 >gi|207858854|ref|YP_002245505.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206710657|emb|CAR35015.1| Cellulose biosynthesis protein subunit C [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 1143 Score = 36.2 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 429 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 485 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 486 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 532 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 533 AALAHLNTL----PTSQW 546 >gi|331083105|ref|ZP_08332222.1| hypothetical protein HMPREF0992_01146 [Lachnospiraceae bacterium 6_1_63FAA] gi|330405107|gb|EGG84644.1| hypothetical protein HMPREF0992_01146 [Lachnospiraceae bacterium 6_1_63FAA] Length = 141 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 15/62 (24%) Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80 K + + +++C L G + + D YEK + L++QN+ +A E F Sbjct: 2 KKRVVLTVLLSMCLLGGCKGKELTD---------------YEKGMENLEKQNYKEALENF 46 Query: 81 NQ 82 + Sbjct: 47 RE 48 >gi|325916180|ref|ZP_08178464.1| Tfp pilus assembly protein PilF [Xanthomonas vesicatoria ATCC 35937] gi|325537600|gb|EGD09312.1| Tfp pilus assembly protein PilF [Xanthomonas vesicatoria ATCC 35937] Length = 690 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 61/196 (31%), Gaps = 33/196 (16%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 + + + V+ L+ +A + + P + + F + A Sbjct: 132 EHPQLLAVDGVVELRRGQSDRALSLLTRAAEQLPDDP---RVMFALGFAYLQKEHFAFAE 188 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 E + P G + I + Q + M ++ + + Sbjct: 189 RAFERVVELNPP-----------GTALRAFIAQLAQRQGRLDDAVTAMQGVLAQ-PDGDR 236 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 +LA E+E L+ G A+ +L LA++ + L+ Sbjct: 237 PAM---------RRLAG-EME-----LQAGRPDQAVAHLRLALAHWP---ADRRTLHALL 278 Query: 235 EAYVALALMDEAREVV 250 A+ L +D+AR+ + Sbjct: 279 TAWERLGAVDDARDTL 294 >gi|322421503|ref|YP_004200726.1| tetratricopeptide repeat-containing protein [Geobacter sp. M18] gi|320127890|gb|ADW15450.1| Tetratricopeptide repeat [Geobacter sp. M18] Length = 263 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 3/68 (4%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 +EKA LKE + K+ E + P A + +A K +QA + Sbjct: 106 FEKANALLKEGEYQKSAELLEKVIAQAP-GLTAPRV--NAANAYSRLNKPEQAEQHLKAA 162 Query: 121 ITQYPESK 128 + P Sbjct: 163 LEAVPGHP 170 >gi|242020786|ref|XP_002430832.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212516035|gb|EEB18094.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 1203 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 48/150 (32%), Gaps = 33/150 (22%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI---RDVPYDQRATKLMLQYM 162 A +++A +L E +PE K++ Y Y ++ + + + Sbjct: 785 EAKDWKEAFALAER----HPEFKDLVYAPYARWLAENDRFVEAQKAFHQAGKLDEAFDVL 840 Query: 163 SRIVE------RYTNS---------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207 ++ + R+ ++ Y++ A R+ L Y K + Sbjct: 841 QKLTDNAVNEGRFQDAGYYYWVLAQQYLESANDKEGEDRDILIDN-------YFKSER-L 892 Query: 208 AAIPRFQLVLANY---SDAEHAEEAMARLV 234 A+I + Y + EA+ + Sbjct: 893 ASIYYTYDNIQKYIDEPFTPYMPEALFNIA 922 >gi|254468556|ref|ZP_05081962.1| hypothetical protein KB13_781 [beta proteobacterium KB13] gi|207087366|gb|EDZ64649.1| hypothetical protein KB13_781 [beta proteobacterium KB13] Length = 304 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 18/149 (12%), Positives = 46/149 (30%), Gaps = 14/149 (9%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLL 98 ++ + V +D + ++ VL + A F ++ P ++L Sbjct: 38 EAKKIVQQLLDSDKENPQLLFIDGVLLSELGEIENAINVFVSLTKSHPTLPEPYNNLAVL 97 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYP----ESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 + +G + A + E+ I +P N+ +Y + + + Sbjct: 98 ---YA--QSGNFDLARTALEKSIKTHPSYATAHVNLGDLYTRMASESYNQALQIDKSNKN 152 Query: 155 TKLMLQYMSRIVERYTNSPY---VKGARF 180 K L + ++ + A+ Sbjct: 153 AKTKLSLIKKLFNFQPIDKNIVLAQDAKK 181 >gi|21228450|ref|NP_634372.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1] gi|20906930|gb|AAM32044.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1] Length = 412 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 51/167 (30%), Gaps = 44/167 (26%) Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV-------- 92 S V + V++ E+ E + L+ +++A F + P Sbjct: 49 DDSGSVTNEEVSNEILAAELNECGLDLLRLGKYNEAIIAFEKAIDKDPGNIYLLNNKAAA 108 Query: 93 ---------------------ARKSLL--MSAFVQYSAGKYQQAASLGEEYITQYPESKN 129 + + L AF G+Y++A + + P+ N Sbjct: 109 LESLGRFEEALKLYQEAVKINSEDADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPN 168 Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 +Y ++ +Q R + + +++ NS Y + Sbjct: 169 ---AWYGKALNLSQAGR--------YEEAVDAYDIVLKE--NSNYKE 202 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 61/198 (30%), Gaps = 29/198 (14%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 Y Y KA+ + + +A + ++ ++ + + G Y +A Sbjct: 165 DYPNAWYGKALNLSQAGRYEEAVDAYDIVLKEN--SNYKE-AWAGKGIALGQMGNYDEAI 221 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 ++ + PE +Y G+ + + K L+ + VE + Sbjct: 222 IAYDKALEIDPEFLE---AWYYKGVDLDSL--------GSFKQALKAYEKAVEIDPENDD 270 Query: 175 VK-------GARFYVTVGRNQLAAKEVEI----GRYYLKRGEYVAAIPRFQLVLANYSDA 223 N K +EI + +G ++ + RF + Y A Sbjct: 271 AWNNMGIDLENLERYDEAINAF-EKAIEINSENSDVWYNKGFTLSQVQRFDEAVEAYRKA 329 Query: 224 EHAEEAMARLVEAYVALA 241 + +EAY +L Sbjct: 330 VQLD---PEYLEAYSSLG 344 >gi|24216575|ref|NP_714056.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai str. 56601] gi|45658921|ref|YP_003007.1| hypothetical protein LIC13095 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24197896|gb|AAN51074.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai str. 56601] gi|45602166|gb|AAS71644.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 235 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 2/75 (2%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQ 104 + + + Y A+ + N+ K + FP F S+LM + Sbjct: 33 IDREISSGNEDPELYYNFAICCARTDNYKKCVSILEELLEKFPRFGE-RENSILMIVYAL 91 Query: 105 YSAGKYQQAASLGEE 119 +Y +A EE Sbjct: 92 IQNKEYSKALDKCEE 106 >gi|300214429|gb|ADJ78845.1| Putative uncharacterized protein [Lactobacillus salivarius CECT 5713] Length = 295 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 12/71 (16%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY----SAGKYQQA 113 E+Y +A K ++++KA + + K + + + Y A Sbjct: 2 SELYFQAEEAYKNKDYTKARKLLEK--------EYLEKKTFRTNYFLFLVFLKIEDYIAA 53 Query: 114 ASLGEEYITQY 124 EYI QY Sbjct: 54 YETANEYIRQY 64 >gi|291279148|ref|YP_003495983.1| hypothetical protein DEFDS_0748 [Deferribacter desulfuricans SSM1] gi|290753850|dbj|BAI80227.1| hypothetical protein [Deferribacter desulfuricans SSM1] Length = 313 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 9/70 (12%) Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131 + A + S F + + Y+ G+Y+++ +L + YP + + Sbjct: 230 RYKDAVKLLEPISDKF------IDAKFYLSLAYYNIGEYEKSLNLLKNIEKIYPNKRRL- 282 Query: 132 YVYYLVGMSY 141 Y+L+G Y Sbjct: 283 --YFLLGKVY 290 >gi|228917613|ref|ZP_04081156.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228842037|gb|EEM87141.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 273 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 25/66 (37%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 +Q+ K LT S ++ L + + + L E+ EKA L+++ Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60 Query: 76 AYEYFN 81 + F Sbjct: 61 EVKKFQ 66 >gi|228930008|ref|ZP_04093019.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228829688|gb|EEM75314.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 273 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 25/66 (37%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 +Q+ K LT S ++ L + + + L E+ EKA L+++ Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60 Query: 76 AYEYFN 81 + F Sbjct: 61 EVKKFQ 66 >gi|209526842|ref|ZP_03275362.1| Clp domain protein [Arthrospira maxima CS-328] gi|209492713|gb|EDZ93048.1| Clp domain protein [Arthrospira maxima CS-328] Length = 402 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 9/97 (9%) Query: 175 VKGARFYVTVGRNQLAAKEVE-IG----RYYLKRGEYVAAI-PRFQLVLANYSDAEHAEE 228 +GA + + LA E++ IG Y K E AA+ RFQ V+ E Sbjct: 289 AEGAIDAANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVPETIE 348 Query: 229 AMARLVEAYV---ALALMDEAREVVSLIQERYPQGYW 262 + L E Y L ++DEA E + + +RY + Sbjct: 349 ILYGLRERYEQHHKLKIIDEALEAAAKLSDRYISDRY 385 >gi|225552373|ref|ZP_03773313.1| TPR domain protein [Borrelia sp. SV1] gi|225371371|gb|EEH00801.1| TPR domain protein [Borrelia sp. SV1] Length = 379 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 71/212 (33%), Gaps = 36/212 (16%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 K+ N+ KA Y+ +C P +L + Y++A + EEY+ PE+ Sbjct: 70 KKNNYDKAIVYYQKCLVKHPSNNY---ALFGLGDCYRNLDNYKKATDIWEEYLKYDPENI 126 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180 V V SY ++ + Q +++E ++ Y + Sbjct: 127 T---VLTRVAASYRKL--------NNFQKSKQTYLKVMELMPDNDYALVGIGHLYYDFKE 175 Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 Y + L E+ IG Y K E+ I F+ L + A Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGIYFFKKALEI---SPSNFYA 232 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + L + Y EA + I E+ P+ Sbjct: 233 VFGLADCYRGNKEYKEALKYWLDIIEKDPKNN 264 >gi|189485379|ref|YP_001956320.1| hypothetical protein TGRD_376 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287338|dbj|BAG13859.1| conserved hypothetical protein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 251 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 11/83 (13%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVARKSLLMSAFVQYSA 107 + RY+ ++ A K+ NFSK E + + P+ + Y Sbjct: 24 AENRYKTQI-ANAEESFKKSNFSKTIEIYESLVQIEKVNNPYIYY------NLSNAYYRN 76 Query: 108 GKYQQAASLGEEYITQYPESKNV 130 G +A E+ + P + + Sbjct: 77 GNLGKAILNMEKALRLAPRDREI 99 >gi|119487755|ref|ZP_01621264.1| TPR repeat protein [Lyngbya sp. PCC 8106] gi|119455588|gb|EAW36725.1| TPR repeat protein [Lyngbya sp. PCC 8106] Length = 998 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 37/257 (14%), Positives = 71/257 (27%), Gaps = 47/257 (18%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 I L + +++ L Y A + ++ ++KA ++F Sbjct: 407 AIAIYQTALTLNPEAVEVQQNLNLAEAAKENPAPIYYTFAQQYYQQGKYNKAIQFFQNYL 466 Query: 85 RDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142 P A + + Q+A + + +P S G + Sbjct: 467 ELQPGEVELYAT-----LSDCFNQIHQPQEAIKVLQTGTQVHPTS----------GQLHF 511 Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202 +I + Q T+ + N Y ++ V + E YY K Sbjct: 512 SLILQLLR-QGETEAAISQAETAFNYLPN-DYTFKLLKHLIV---PIIYHHPESINYYRK 566 Query: 203 RGEYVAAIPRFQLVLANYSDAE-----HAEEAMARLVE------AYVALALMDEAREVV- 250 R E Q + E A L AY A +++ + Sbjct: 567 RFE--------QELQTLIQTTRLETPAERESAFWGLSRWTNFYLAYQAHNVVESQKNYGN 618 Query: 251 ---SLIQERYPQGYWAR 264 +++ YP W + Sbjct: 619 LVHNIMAANYPN--WVK 633 >gi|90414945|ref|ZP_01222908.1| hypothetical protein P3TCK_06967 [Photobacterium profundum 3TCK] gi|90323945|gb|EAS40543.1| hypothetical protein P3TCK_06967 [Photobacterium profundum 3TCK] Length = 390 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 9/58 (15%), Positives = 21/58 (36%), Gaps = 8/58 (13%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYSAGKYQQAASLGEE 119 A L L+E ++ KA + +++ + A Y + +A ++ Sbjct: 314 AQLLLQEGHYHKALTELERVKDK------TKRADVELAKVRAYYKLEDFDRAIIHAKQ 365 >gi|83814130|ref|YP_445326.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855] gi|83755524|gb|ABC43637.1| tetratricopeptide repeat domain protein [Salinibacter ruber DSM 13855] Length = 191 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 59/180 (32%), Gaps = 30/180 (16%) Query: 68 LKEQNFSKAYEY------FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ NF +A + + D+ + +A Y +Y +A + + + Sbjct: 31 YEQGNFQQALDGTGDRAGLLAIADDYGGTDAGNLATFYAANALYQRDEYDRALTYYQRFE 90 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 D+ +G S + + + + + +Y A Y Sbjct: 91 K------EKDF----IGASAYAAQAAIQETRGSFERAGGLYEQAASQY---QNKLTAPRY 137 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 + + G+ Y + G+Y AAI ++ + Y D+E A A L A V Sbjct: 138 L-----------LNAGQAYEEAGQYEAAIGVYERIQEEYPDSEQASNAERYLARAKVHQG 186 >gi|110056|pir||S14538 transition protein - mouse Length = 411 Score = 36.2 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 35/84 (41%), Gaps = 2/84 (2%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFS 74 +++ L ++A+C L ++ + ++ D ++ ++ + L +F Sbjct: 264 MQKVHALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFD 323 Query: 75 KAYEYFNQCSRDFPFAGVARKSLL 98 A F + + +P + A K+ L Sbjct: 324 LARADFQKVLQLYP-SNKAAKTQL 346 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 18/146 (12%), Positives = 43/146 (29%), Gaps = 30/146 (20%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARK-------SLLMSAFVQYSAGK 109 E+ + KE + +A + + + +K S L A Sbjct: 228 ERGTAYFKEGKYKQALLQYKKIVSWLEYESSFSGEEMQKVHALRLASHLNLAMCHLKLQA 287 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169 + A + + ++ + G ++ + D ++++ Y Sbjct: 288 FSAAIESCNKALELDSNNEKG---LFRRGEAHL-AVNDFDL-------ARADFQKVLQLY 336 Query: 170 TNSPYVKGARFYVTVG----RNQLAA 191 ++ A+ + V R QLA Sbjct: 337 PSNK---AAKTQLAVCQQRTRRQLAR 359 >gi|326625359|gb|EGE31704.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 1143 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 429 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 485 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 486 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 532 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 533 AALAHLNTL----PTSQW 546 >gi|326431071|gb|EGD76641.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818] Length = 753 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 64/231 (27%), Gaps = 53/231 (22%) Query: 60 VYEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKY 110 +Y + + + KA ++ + P S +S G+Y Sbjct: 216 LYNNLGIANYSKGKYEKAIAFYEKALAITVEVLGEKHPSTADTYNS---LGAAYHSKGEY 272 Query: 111 QQAASLGE-----EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 +A E T + +Y + +Y Q+ + + + Sbjct: 273 AKAIQQYENALAIRLETLGKKHPKTADIYNNLSAAYHSKGEYATAIQQYENALAIRLETL 332 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP--------RFQLVL 217 E++ N+ N L G Y G+Y AI R + + Sbjct: 333 GEKHPNTADT----------YNNL-------GSVYSSEGQYDKAIHFHEKALAIRVETLG 375 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEA--------REVVSLIQERYPQG 260 +S A + AY D+A ++ E++P Sbjct: 376 EKHSRTASAYLGLGL---AYQRKGDYDKAIHFHEKDLAITAEVLGEKHPST 423 >gi|288803010|ref|ZP_06408446.1| putative TPR domain protein [Prevotella melaninogenica D18] gi|288334527|gb|EFC72966.1| putative TPR domain protein [Prevotella melaninogenica D18] Length = 1152 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 22/54 (40%) Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 A + V NY D E ++ L Y+ A V+ + +++P+ W Sbjct: 600 AEKALRRVSDNYPDYEQMDDVYYHLYLLYMRKNEPQVAENYVTRLIQKFPKSKW 653 >gi|284037591|ref|YP_003387521.1| hypothetical protein Slin_2706 [Spirosoma linguale DSM 74] gi|283816884|gb|ADB38722.1| TPR repeat-containing protein [Spirosoma linguale DSM 74] Length = 928 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 35/83 (42%), Gaps = 16/83 (19%) Query: 60 VYEKAVLFLKEQNFSKAYEYFN---QCSRDFPF------AGVARKSLLMSAFVQYSAGKY 110 Y ++ + ++ A + F ++ +P + A AF+ Y+ G Y Sbjct: 111 YYNLGRIYGDQTHYRLAIQAFTNAVAIAKQYPEKWTSGASAYAE-----IAFIYYNIGDY 165 Query: 111 QQAASLGEE--YITQYPESKNVD 131 ++AA++ +E +++Q + Sbjct: 166 EKAANVAQEGFFLSQRANDPKMA 188 >gi|297568570|ref|YP_003689914.1| protein of unknown function DUF181 [Desulfurivibrio alkaliphilus AHT2] gi|296924485|gb|ADH85295.1| protein of unknown function DUF181 [Desulfurivibrio alkaliphilus AHT2] Length = 600 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 7/76 (9%) Query: 60 VYEKAVLFLKE-QNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 +Y LK+ ++ +A E + D + M F Y YQ A S Sbjct: 477 IYAYMGESLKDMGDYQQAIEVLRRGIEHD----EERQDIHNMLGFCHYKLADYQSAVSHF 532 Query: 118 EEYITQYPESKNVDYV 133 I P S +D+ Sbjct: 533 ARAIELEPGS-AIDFA 547 >gi|150020214|ref|YP_001305568.1| TPR repeat-containing protein [Thermosipho melanesiensis BI429] gi|149792735|gb|ABR30183.1| Tetratricopeptide TPR_2 repeat protein [Thermosipho melanesiensis BI429] Length = 513 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 66/220 (30%), Gaps = 35/220 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY------SAGKYQQA 113 YEK L QN+ A E + A+ L + Y G Y+ A Sbjct: 62 YYEKFKEHLNAQNYEDAREILEK----------AKNVLYDYRYHFYYGLLFSKLGDYENA 111 Query: 114 ASLGEEYITQYPESKNVDYV-YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV------ 166 + + P Y+ YY +G + ++ + + Sbjct: 112 EVELKRSLAMNPNF----YLGYYELGNLLY-LKKEYDDAIQMYLKAFEINKEFSLPLLKM 166 Query: 167 --ERYTNSPYVK-GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 + N + + + +L+ + +G Y ++ A F+ L+ Sbjct: 167 GDAYFENGQFKDAEIAYKTALKVEKLSQIYLRLGVLYNSIQKFEKAEKIFREGLS----V 222 Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 E+ E L L +A +V+ + + +P Sbjct: 223 EYKPEIAYNLAYTLSRLGKHFQALQVLKELSKNFPSTEVY 262 >gi|118480069|ref|YP_897220.1| ABC transporter substrate-binding protein [Bacillus thuringiensis str. Al Hakam] gi|228936282|ref|ZP_04099081.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948710|ref|ZP_04110988.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229124520|ref|ZP_04253705.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus cereus 95/8201] gi|118419294|gb|ABK87713.1| ABC transporter, substrate-binding protein [Bacillus thuringiensis str. Al Hakam] gi|228658860|gb|EEL14515.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus cereus 95/8201] gi|228811017|gb|EEM57360.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823398|gb|EEM69231.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 273 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 25/66 (37%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 +Q+ K LT S ++ L + + + L E+ EKA L+++ Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60 Query: 76 AYEYFN 81 + F Sbjct: 61 EVKKFQ 66 >gi|307720885|ref|YP_003892025.1| von Willebrand factor A [Sulfurimonas autotrophica DSM 16294] gi|306978978|gb|ADN09013.1| von Willebrand factor type A [Sulfurimonas autotrophica DSM 16294] Length = 515 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 7/58 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 +KA + +++ + KA +++ + + P + A Y KY +A + Sbjct: 329 QKAHSYYEQKQYEKAIQHYKELT---PTSE----VNYNIANALYKQHKYLKAVISYKR 379 >gi|297691489|ref|XP_002823117.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like isoform 1 [Pongo abelii] Length = 944 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 52/155 (33%), Gaps = 30/155 (19%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP-YDQRAT 155 LL + + + +A ++ + P+ V +S + +Q Sbjct: 818 LLSAIYS--KQENHDKALDAIDKALQLKPKDPKV--------ISELFFTKGNQLREQNLL 867 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVG-RNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 + V+ + A+ ++ +G + +G+YV+A ++ Sbjct: 868 DKAFESYRVAVQLNPD-----QAQAWMNMGGIQHI-------------KGKYVSARAYYE 909 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 L D++ +E +A+L L + E + Sbjct: 910 RALQLVPDSKLLKENLAKLDRLEKRLQEVREKDQT 944 >gi|296127775|ref|YP_003635027.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] gi|296019591|gb|ADG72828.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] Length = 468 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 61/190 (32%), Gaps = 36/190 (18%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 +A+ + + + A +Y + + + Y +Y A + I Sbjct: 110 ARALDKIDRKEEALA-QYLTLLKEN----DYKLIVDIEIGTIYYKNRQYDTAIKYFSDAI 164 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 P + + M + MS + ++ + P Sbjct: 165 DIQPNNSE---ALKYKAFCFVNM--------GNYNEAISIMSNVYKKMPDDP-------- 205 Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241 N +GR Y R +Y AI R+ V +Y D E+A +++ + Y+ L Sbjct: 206 ---ILN------YNLGRAYKGRDDYKTAI-RYYSV--SYKDKEYAVKSLYEMGLCYIKLE 253 Query: 242 LMDEAREVVS 251 ++ A + + Sbjct: 254 NIESAIKTLE 263 >gi|293396640|ref|ZP_06640916.1| conserved hypothetical protein [Serratia odorifera DSM 4582] gi|291420904|gb|EFE94157.1| conserved hypothetical protein [Serratia odorifera DSM 4582] Length = 507 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 45/131 (34%), Gaps = 29/131 (22%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + L ++ ++ +A E+F P L Y AG + AAS Sbjct: 336 QGQLAFRQGHYQRAAEHF-----QQP---------LWQGIAYYRAGDFTAAASA------ 375 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182 + + + + +L G SYAQ Q+ + + R + + + R + Sbjct: 376 FHQATPTAETLLWL-GNSYAQ--------QKQWQQAINSYDRALSLQPDWQIARHNRAEI 426 Query: 183 TVGRNQLAAKE 193 +L +E Sbjct: 427 AKIIMKLRQQE 437 >gi|290985397|ref|XP_002675412.1| predicted protein [Naegleria gruberi] gi|284089008|gb|EFC42668.1| predicted protein [Naegleria gruberi] Length = 228 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 6/80 (7%) Query: 49 DSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYS 106 + V + +Y + V+ L+ + + KA E F++ + F+ + L + Sbjct: 128 NKVIEESPDYLIYSRRGVVHLESKEYLKAIEDFSKSIELNSKFST----AYLSRGSAYHQ 183 Query: 107 AGKYQQAASLGEEYITQYPE 126 G+Y+ A E I P Sbjct: 184 NGEYENAIKDFTEAIKLEPT 203 >gi|281208890|gb|EFA83065.1| signal recognition particle 72 kDa subunit [Polysphondylium pallidum PN500] Length = 636 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 17/111 (15%) Query: 20 YKFALTIFFSIA-------VCFLVGWERQSSRDVYLD-----SVTDVRYQREVYEKAVLF 67 YK AL +F I C ++ SS LD + + + ++EKA Sbjct: 24 YKKALRVFLLINKADVEAFQCKVICLMFNSSFQEALDCLKNAASPSTQSEPMLFEKAYCL 83 Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 +++A E ++ + + + A + Y KYQ+ ++ E Sbjct: 84 YSLAKYNEALELIDKLKQQ-----KTLRVQELEAQIYYKLEKYQKTIAIYE 129 >gi|226311501|ref|YP_002771395.1| hypothetical protein BBR47_19140 [Brevibacillus brevis NBRC 100599] gi|226094449|dbj|BAH42891.1| hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 674 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 16/131 (12%), Positives = 42/131 (32%), Gaps = 29/131 (22%) Query: 135 YL-VGMSYAQMIRDVPYDQRATK-------LMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 YL + + D+ Q +++ ++ Sbjct: 288 YLAKAHALYALDPDLIRLQGEYFLRTGNKNRAFHTFDQLIRLDPDNIDAY---------- 337 Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246 + R +L++G+ AI + +L + +A + L + Y+ L ++A Sbjct: 338 -------LYRARLFLEKGDATDAIKDCEEILTRMPE---LWDARSLLGKGYLQLGEWEKA 387 Query: 247 REV-VSLIQER 256 ++V ++ Sbjct: 388 QKVFQEILSHN 398 >gi|188994860|ref|YP_001929112.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277] gi|188594540|dbj|BAG33515.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277] Length = 393 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 49/161 (30%), Gaps = 29/161 (18%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 ++ A + + S FP + + L + +V AG+ +A + Q + Sbjct: 112 RQGRADDAVRLYEEMSEQFP-SEDELRFKLANMYV--QAGEIDKAIYIYNRMEAQN--AV 166 Query: 129 NVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMSRIVERYT--------------NSP 173 N S IR + T L + R+ R+ +S Sbjct: 167 NAADA------SNYAEIRARLYLMTGQTNKALNELRRLCNRFPEVNEFRLKYAGTLLDSE 220 Query: 174 YVKGARFYVTVG--RNQLAA-KEVEIGRYYLKRGEYVAAIP 211 A + + + + + YYL E AAI Sbjct: 221 KYDEAYEQLQLIARTDSTSGLYHFAMASYYLGTNEKEAAIN 261 >gi|200389197|ref|ZP_03215809.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199606295|gb|EDZ04840.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 1143 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 429 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 485 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 486 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 532 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 533 AALAHLNTL----PTSQW 546 >gi|189425402|ref|YP_001952579.1| hypothetical protein Glov_2343 [Geobacter lovleyi SZ] gi|189421661|gb|ACD96059.1| hypothetical protein Glov_2343 [Geobacter lovleyi SZ] Length = 756 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 55/151 (36%), Gaps = 46/151 (30%) Query: 57 QREVYEKAVLFLKEQNFSK-AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 +R+ +E A ++ ++ K A E F + + L +A V + Sbjct: 297 ERQDFESARTVMQGESAQKQAKELFAEIYQQ----------ELENARV---------SIP 337 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYA--QMIRDVPYDQRATKLMLQ------YMSRIVE 167 ++++ YPES G++ Q+I + D +A K M + V Sbjct: 338 ALQKFMASYPES----------GLADKSRQLINGLEGD-KAWKNRYAGKHDAPSMKKFVT 386 Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198 Y +S Y++ A + E+ + + Sbjct: 387 NYPHSLYLEEANKRIR-------RSELAVAK 410 >gi|118444334|ref|YP_877536.1| hypothetical protein NT01CX_1455 [Clostridium novyi NT] gi|118134790|gb|ABK61834.1| TPR domain protein [Clostridium novyi NT] Length = 458 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 7/81 (8%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 E +K L+++ + +A Y+ + P A+ V + +Y++A Sbjct: 69 EEYRKKGNNALEKKQYRRAILYYKKILLIEPKITFAKN---KLGLVFFYNKQYEEAIIQF 125 Query: 118 EEYITQYPESK----NVDYVY 134 E I P++ N+ YVY Sbjct: 126 RELIQINPKNSIFYNNLAYVY 146 >gi|78777126|ref|YP_393441.1| calcium-binding EF-hand [Sulfurimonas denitrificans DSM 1251] gi|78497666|gb|ABB44206.1| Calcium-binding EF-hand [Sulfurimonas denitrificans DSM 1251] Length = 431 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 7/69 (10%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGE 118 Y+ A+ + F+KAY F + S P + L +Y +A + + Sbjct: 23 YKDAIQSYNAKEFAKAYPVFEELSLKSP-----ANAELNFFLGRSALELKRYDEALTAFD 77 Query: 119 EYITQYPES 127 + P Sbjct: 78 RVLMLNPSH 86 >gi|197364444|ref|YP_002144081.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56129775|gb|AAV79281.1| putative TPR-repeat-containing protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095921|emb|CAR61500.1| putative TPR-repeat-containing protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 1143 Score = 36.2 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 22/138 (15%) Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +S+ +D + + ++A E +++A E + P + Sbjct: 429 SLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW---VTY 485 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATK 156 + + AG++ QA + Q P Y Y YL G D + Sbjct: 486 RLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSG---------SDRD----R 532 Query: 157 LMLQYMSRIVERYTNSPY 174 L +++ + S + Sbjct: 533 AALAHLNTL----PTSQW 546 >gi|327401541|ref|YP_004342380.1| hypothetical protein Arcve_1665 [Archaeoglobus veneficus SNP6] gi|327317049|gb|AEA47665.1| Tetratricopeptide TPR_1 repeat-containing protein [Archaeoglobus veneficus SNP6] Length = 222 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 64/194 (32%), Gaps = 37/194 (19%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117 ++++EKA + +N + E+F++C P L Y G+ +A S Sbjct: 6 QKLFEKA---MNARNPEEEVEFFSKCLEMEPENIY---VLNNLGIALYELGRIDEAISYI 59 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 + + P + +Y G+ + D + + + + Sbjct: 60 DRALELNP---DYADAWYNRGIVLS--------DAGKYDEAIACFEKAIALNPD------ 102 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237 + A + + Y + G AI ++ ++ D EHA A + AY Sbjct: 103 ---------DAAAWNNMGLA--YYESGNMGKAIECYRKCVSI--DEEHAA-AWYNMGLAY 148 Query: 238 VALALMDEAREVVS 251 ++A E Sbjct: 149 YESGRFNKAEESFK 162 >gi|298251766|ref|ZP_06975569.1| ATP-dependent DNA helicase, RecQ family [Ktedonobacter racemifer DSM 44963] gi|297546358|gb|EFH80226.1| ATP-dependent DNA helicase, RecQ family [Ktedonobacter racemifer DSM 44963] Length = 3126 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 36/86 (41%), Gaps = 3/86 (3%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + ++++ + ++A L+ K + +++A F Q ++L+ Sbjct: 3 EDDNTDISEIDESDAILKEAQLYYKRREYNQALHAFEQILSR---NATTVEALIGKGNCL 59 Query: 105 YSAGKYQQAASLGEEYITQYPESKNV 130 G +++A +E I+ P+S + Sbjct: 60 RKQGYHREAIDTFDEAISINPQSIDA 85 >gi|283779948|ref|YP_003370703.1| hypothetical protein Psta_2170 [Pirellula staleyi DSM 6068] gi|283438401|gb|ADB16843.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068] Length = 438 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 77/217 (35%), Gaps = 22/217 (10%) Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL-KEQNFSKAYEYFNQCSRDF 87 +++ F + D S + +VY A L + F +A +++ + Sbjct: 95 AVSGAFSSKPNGDVTEDPVSLSTKPKKVGPDVYVAAARLLENQGKFEEAQAQYDKALKV- 153 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147 + +L+ A + G+ +A L + I +PES Y +G+ YA+ +D Sbjct: 154 --SPKDLNTLVSLARMYDRQGQSAKAVELYRKAIAAHPES---GMAYNDLGLCYARQ-KD 207 Query: 148 VPYDQRATKLMLQ-------YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200 +P ++ Y + + + A ++ Q A +G Y Sbjct: 208 LPQSMANLHKAVELQPANVKYRNNLATVQVEAGRADEAIKTLSAVNPQAVAH-YNVG--Y 264 Query: 201 L---KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 L K AA + V + + A E +A+L Sbjct: 265 LLEQKGNAQGAAQHMARAVELD-PSMQAAREMLAKLE 300 >gi|238783663|ref|ZP_04627683.1| Glycosyl transferase, family 2 [Yersinia bercovieri ATCC 43970] gi|238715376|gb|EEQ07368.1| Glycosyl transferase, family 2 [Yersinia bercovieri ATCC 43970] Length = 1265 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 42/126 (33%), Gaps = 33/126 (26%) Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 YL G+ Q ++++ Y ++ + L Sbjct: 1117 YLKGL----------RSQERYLEAEAILNKLPIEYFDN-------------KELL----F 1149 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 E G + A+ + +L Y + A RL +Y L +++EA ++ + + Sbjct: 1150 EAGENCYSMRRWDASAKIWLQLLNEY------DIANYRLAYSYRMLGMIEEAMTLLKISK 1203 Query: 255 ERYPQG 260 +P+ Sbjct: 1204 NTFPES 1209 >gi|254414341|ref|ZP_05028108.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] gi|196179016|gb|EDX74013.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] Length = 717 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 45/127 (35%), Gaps = 18/127 (14%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + Y Y + + ++ + + A ++ + P A ++ L + + G Sbjct: 343 NPDYAEAWYMQGLALMQGEQPNAAIACLDKATALKP--DYA-QAWLYRGHLLFQLGHLAD 399 Query: 113 AASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 A + ++ T P DY + + G++ Q+ R + + R+VE Y Sbjct: 400 AIASCQQATTLQP-----DYVEAWSIQGIALMQLQR--------PHEAIACLDRVVELYP 446 Query: 171 NSPYVKG 177 P Sbjct: 447 EHPEAWK 453 >gi|145516292|ref|XP_001444040.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124411440|emb|CAK76643.1| unnamed protein product [Paramecium tetraurelia] Length = 681 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 12/111 (10%), Positives = 38/111 (34%), Gaps = 13/111 (11%) Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 ++ ++L + G++ +A + + I P + + Y G+ ++ Sbjct: 570 YSQENTRTLNNRGYCLAKLGQFDEAIADYTKAIKLDPVNIH---AIYNRGICNERI---- 622 Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + ++ S+++ + A F + + ++ I Y Sbjct: 623 ----GEFRKAIEDFSQVIHL--QNDQGANAYFNRGCCYDNIGEMDLAIADY 667 Score = 35.1 bits (80), Expect = 9.8, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 62/195 (31%), Gaps = 50/195 (25%) Query: 62 EKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + K+++F KA E++ F KS+ F Y A S + Sbjct: 274 SQGFEARKKEDFIKAIEFYTMALM----FNPNHFKSIFNRGFAFDKLRMYNDAISDYTKA 329 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 I +SKN Y YY G+SY + L ++ ++ +E S Sbjct: 330 IEL--DSKNA-YAYYNRGISYDKK--------GDYNLAIKDFAKSIELDP-SK------- 370 Query: 181 YVTVGRNQLAAKEVEIGRYY------LKRGEYV-AAIPRFQLVLANYSDAEHAEEAMARL 233 +Y +K+ + AI F + D H +A Sbjct: 371 ----------------ADFYHNKGFAMKKKNLIKEAILEFNECIRL--DKNHF-KAYYNR 411 Query: 234 VEAYVALALMDEARE 248 Y L D+A++ Sbjct: 412 ANCYEKLGDFDKAQQ 426 >gi|156740598|ref|YP_001430727.1| hypothetical protein Rcas_0580 [Roseiflexus castenholzii DSM 13941] gi|156231926|gb|ABU56709.1| TPR repeat-containing protein [Roseiflexus castenholzii DSM 13941] Length = 319 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 14/120 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y + ++ ++ + + A E F+ R P +L A + Y+ G A + + Sbjct: 172 YRQGLILVRLNDRTAAREAFDAAIRARPQH---VDALYERALLHYAVGDLNAALADLDTA 228 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 + S YY G+ + + Q + + + + + P AR Sbjct: 229 LRL---SPRAANAYYARGL--------IRHTQGDPRSAIADFGQALLLRPDYPEALIARA 277 >gi|111115017|ref|YP_709635.1| hypothetical protein BAPKO_0197 [Borrelia afzelii PKo] gi|110890291|gb|ABH01459.1| conserved hypothetical protein [Borrelia afzelii PKo] Length = 379 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 68/212 (32%), Gaps = 36/212 (16%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 K+ N+ KA Y+ +C P +L + Y++A + EEY+ PE+ Sbjct: 70 KKNNYDKAIVYYQRCLIKHPNNNY---ALFGLGDCYRNLDNYKKATDIWEEYLKYDPEN- 125 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180 ++ + + + Q +++E + Y + Sbjct: 126 ----------ITVLTRVASSYRKLKNFQKSKQTYLKVMELMPENDYALVGIGHLYYDFKE 175 Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 Y + L E+ IG Y K E+ I F+ L + A Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGIYFFKKALEI---SPSNFYA 232 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + L + Y EA + I E+ P+ Sbjct: 233 IFGLADCYRGNKEYKEALKYWLDIIEKDPKNN 264 >gi|189499558|ref|YP_001959028.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides BS1] gi|189494999|gb|ACE03547.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides BS1] Length = 571 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 6/105 (5%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK--AVLFLKEQNFSKAYEYFNQCSR 85 FS+A F V + S + + ++ + Y + A ++ + + +A F Q + Sbjct: 81 FSLAKAF-VALTKPDSAQYHAEKAVTLQPENRFYRQLLAGIYFDMKYYDRAAVQFEQLAE 139 Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 FP K+L A + KY A + + P ++N Sbjct: 140 RFPS---KTKTLFFLAHAYLADEKYADALNTFLRILQHDPSNENA 181 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 48/154 (31%), Gaps = 30/154 (19%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 ++ + A ++ S ++ ++ PE+ L ++Y R Sbjct: 430 QAHITLAMAYDRLQDQLKSISAYKDVLSLDPEN-----ALALNNLAYLYAERG-----EN 479 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 ++Y VE ++P ++ Y K GEY A + Sbjct: 480 LNEAIEYAKTAVESDPDNPVYLDTLGWL-----------------YYKTGEYGKAREYLE 522 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 LA D + L E Y AL A+E Sbjct: 523 KALAKDPDEPEIYD---HLAEIYRALGKETRAKE 553 >gi|284039246|ref|YP_003389176.1| hypothetical protein Slin_4396 [Spirosoma linguale DSM 74] gi|283818539|gb|ADB40377.1| Tetratricopeptide TPR_2 repeat protein [Spirosoma linguale DSM 74] Length = 602 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 63/194 (32%), Gaps = 33/194 (17%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-----SLLMSAFVQYSAGKYQQAAS 115 Y L ++ + +A + + + + + L G Y ++ Sbjct: 417 YSNGSANLYKRRYQQAVDALEESQKLLAASSSNELKKGISAQL--GDAYNGLGDYAKSNE 474 Query: 116 LGEEYITQYPESKNVDYVY--YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 E + P + DYV Y SY +R + LQ ++VER + Sbjct: 475 SYEAVLKVDPLN---DYVLNNY----SYFLSLRKENLPR-----ALQLAQKLVERNPTNA 522 Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233 +V +K+ + YL+ ++ +Y D A+ +L Sbjct: 523 TYLDTYAWVLYV-----SKDYAKAKQYLE-KALADPANVSGTIIEHYGD------ALYQL 570 Query: 234 VEAYVALALMDEAR 247 +A AL +A+ Sbjct: 571 GQADKALEQWKKAK 584 >gi|145521857|ref|XP_001446778.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124414267|emb|CAK79381.1| unnamed protein product [Paramecium tetraurelia] Length = 860 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 43/111 (38%), Gaps = 14/111 (12%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 + ++ Q + +A + F Q R P ++L S QY + +++A E + Sbjct: 551 RGKANMQTQQYDEALQDFEQVIRLEPNNH---QALFESGQAQYMSSNFEKA---CEMFGK 604 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173 + ++ Y + + A ++D K ++Y+ + ++ Sbjct: 605 ALVIAPEIE--QYHIKRAIALSLQDFD------KEAIEYLKDAINQFPEFE 647 >gi|124002217|ref|ZP_01687071.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC 23134] gi|123992683|gb|EAY32028.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC 23134] Length = 336 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 9/60 (15%) Query: 58 REVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 ++ ++ + + NF++A F + A A YS +Y++A Sbjct: 28 NDLLKQGRVENSKGNFNEAIAIFQQALKIDSQHTIATY------ELANSYYSNKEYEKAL 81 >gi|118362595|ref|XP_001014524.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89296291|gb|EAR94279.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 604 Score = 36.2 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 45/125 (36%), Gaps = 14/125 (11%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112 + + + Y ++ Q + ++ EY + P ++ A++ KY Q Sbjct: 482 NQQSEELYYYVGFALIQLQKYDESIEYLIKALELNP--NY-DQAYQQLAYIFNIKQKYDQ 538 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 A ++ I P + D VYY +G +Y + T L + + ++ N+ Sbjct: 539 AIQFSQKAIEINPNN---DSVYYQLGWAYEKSY--------LTPLAIDSYKKSLQINPNN 587 Query: 173 PYVKG 177 Sbjct: 588 KDSAE 592 >gi|157829317|gb|ABV82609.1| ubiquitously transcribed tetratricopeptide repeat protein Y-linked transcript variant 55 [Homo sapiens] Length = 788 Score = 36.2 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 42/141 (29%) Query: 108 GKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y +A S + Y + DY Y +G+ Y A ++ Sbjct: 104 EDYSKALSAYQRYYSL-----QADYWKNAAFLYGLGLVYFYY--------NAFHWAIKAF 150 Query: 163 SRIVERYTNSPYVKGARFYVTVG-------RNQL-----------------AAKEVEIGR 198 ++ + K + + ++ L A + I Sbjct: 151 QDVLYVDPSFCRAKEIHLRLGLMFKVNTDYKSSLKHFQLALIDCNPCTLSNAEIQFHIAH 210 Query: 199 YYLKRGEYVAAIPRFQLVLAN 219 Y + +Y +A ++ +L Sbjct: 211 LYETQRKYHSAKEAYEQLLQT 231 >gi|320199628|gb|EFW74218.1| putative membrane protein [Escherichia coli EC4100B] Length = 248 Score = 36.2 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 18/155 (11%), Positives = 49/155 (31%), Gaps = 23/155 (14%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS--AFVQYS 106 + + + Y+ A + + + +A ++ Q A ++ +M A Q++ Sbjct: 78 EELAIAETNQNHYQLANELARLERYHEAVPHYQQALS----GIFAHEAAMMLSLAQAQFA 133 Query: 107 AGKYQQAASLGEEYITQYPESKNVD-YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 ++ E+ + P+ ++ D ++ + ++ Q + Sbjct: 134 IQEFAACQQTLEDVMRYNPDFQSADGHLLFARALA----------AQEKYADAESEFEVL 183 Query: 166 VERYTNSP---YVKGARFYVTVGRNQLAAKEVEIG 197 V Y Y ++ R A E + Sbjct: 184 VSYYPGPQARIYYAEMLEKMSRLRE---ANEQYVA 215 >gi|313201929|ref|YP_004040587.1| hypothetical protein MPQ_2203 [Methylovorus sp. MP688] gi|312441245|gb|ADQ85351.1| TPR repeat-containing protein [Methylovorus sp. MP688] Length = 400 Score = 36.2 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 33/90 (36%), Gaps = 11/90 (12%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAG 108 + + ++ + V+ +A + F + + +P ++L + G Sbjct: 51 AKNPKSVDALFLRGVILTDSGKRDEAMKAFTEMTEKYPALPEPYNNLAVL---YA--ERG 105 Query: 109 KYQQAASLGEEYITQYP----ESKNVDYVY 134 +Y +A E I +P +N+ +Y Sbjct: 106 EYDKARQALESAIKTHPSYATAHENLGDIY 135 >gi|293414612|ref|ZP_06657261.1| yciM protein [Escherichia coli B185] gi|291434670|gb|EFF07643.1| yciM protein [Escherichia coli B185] Length = 389 Score = 36.2 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 36/186 (19%) Query: 64 AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + +A + FNQ DF + + + A ++Q+A + E + Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQA-----TSEWQKAIDVAERLV 168 Query: 122 TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + + V+ ++ + + + D+ K NS Sbjct: 169 KLGKDKQRVEIAHFYCELALQHM-ASDDLDRAMTLLKKGAAADK-------NS------- 213 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 A + +GR ++ +GEY A+ Q V++ D E E + L Y Sbjct: 214 ----------ARVSIMMGRVFMAKGEYAKAVESLQRVIS--QDRELVSETLEMLQTCYQQ 261 Query: 240 LALMDE 245 L E Sbjct: 262 LGKTAE 267 >gi|322421635|ref|YP_004200858.1| TPR repeat-containing protein [Geobacter sp. M18] gi|320128022|gb|ADW15582.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp. M18] Length = 406 Score = 36.2 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 47/164 (28%), Gaps = 31/164 (18%) Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y Y +A+S + I+ P + + + Q+ ++ Sbjct: 39 YYQKKDYSRASSEFKRAISLDPTNAQ-----------SYNYLANAYLAQKKYDDAIKTYR 87 Query: 164 RIVERYT--NSPYVKGARFYVTVGRNQLAAKEVEIG---------------RYYLKRGEY 206 + +S + Y+ + LA KE + + YL+ G Y Sbjct: 88 NSLTLDPTQDSVHTNLGNIYLQQKKYNLAEKEFKAAAKLNPTDTLAPYTLGQLYLQTGRY 147 Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 A +F+ V + L Y EA + + Sbjct: 148 AEAETQFKKVSKMAPTDPNPY---YSLGATYNKEGKYAEAVKQL 188 >gi|302345210|ref|YP_003813563.1| tetratricopeptide repeat protein [Prevotella melaninogenica ATCC 25845] gi|302149062|gb|ADK95324.1| tetratricopeptide repeat protein [Prevotella melaninogenica ATCC 25845] Length = 1172 Score = 36.2 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 22/54 (40%) Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 A + V NY D E ++ L Y+ A V+ + +++P+ W Sbjct: 613 AEKALRRVSDNYPDYEQMDDVYYHLYLLYMRKNEPQVAENYVTRLSQKFPKSKW 666 >gi|262199073|ref|YP_003270282.1| lytic transglycosylase catalytic [Haliangium ochraceum DSM 14365] gi|262082420|gb|ACY18389.1| Lytic transglycosylase catalytic [Haliangium ochraceum DSM 14365] Length = 797 Score = 36.2 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 70/236 (29%), Gaps = 34/236 (14%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-KYQQ 112 R Y A + +A ++ + P + +K+ + + Sbjct: 196 TRRAEARYRLAQALDQRTQIGEALTHYRTLTIHVPLSSWGQKAQ-ERIDALLPTQPESEN 254 Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-----------PYDQRATKLMLQY 161 A I S+ + GM+Y +R+ D ++ + Sbjct: 255 AR------IRSMNASEYIA-----RGMAYFDAMRNPLSEADFAAALSTSDITPSEHCVAA 303 Query: 162 MSRIVERYTNSPYVKGARFYVTVGR---------NQLAAKEVEIGRYYLKRGEYVAAIPR 212 R + + K A + + GR Y G++ AI R Sbjct: 304 FHRAQSVF-KARDRKRAAPLFDEAIAACASAHNLDLQVKSAYQAGRSYAFEGQHQIAIAR 362 Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268 +Q + ++A R E Y +L D +++ I E+YP+G Sbjct: 363 YQQAETIDPSHTYVDDARLRQAEEYTSLDDQDTVTLLLASIPEKYPEGDMRAEALW 418 >gi|216263769|ref|ZP_03435763.1| TPR domain protein [Borrelia afzelii ACA-1] gi|215979813|gb|EEC20635.1| TPR domain protein [Borrelia afzelii ACA-1] Length = 379 Score = 36.2 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 68/212 (32%), Gaps = 36/212 (16%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 K+ N+ KA Y+ +C P +L + Y++A + EEY+ PE+ Sbjct: 70 KKNNYDKAIVYYQRCLIKHPNNNY---ALFGLGDCYRNLDNYKKATDIWEEYLKYDPEN- 125 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV--------KGARF 180 ++ + + + Q +++E + Y + Sbjct: 126 ----------ITVLTRVASSYRKLKNFQKSKQTYLKVMELMPENDYALVGIGHLYYDFKE 175 Query: 181 YVTVGRNQLAAKEVE-----------IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229 Y + L E+ IG Y K E+ I F+ L + A Sbjct: 176 YKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLREFTRGIYFFKKALEI---SPSNFYA 232 Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261 + L + Y EA + I E+ P+ Sbjct: 233 IFGLADCYRGNKEYKEALKYWLDIIEKDPKNN 264 >gi|154502750|ref|ZP_02039810.1| hypothetical protein RUMGNA_00564 [Ruminococcus gnavus ATCC 29149] gi|153796633|gb|EDN79053.1| hypothetical protein RUMGNA_00564 [Ruminococcus gnavus ATCC 29149] Length = 399 Score = 36.2 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 11/90 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGEE 119 K L+ + + A +YF A+++ A + +A S+ Sbjct: 132 AKGYDALQMKEYQTAEKYFK-----HAIGKNAQRAEAYSGLAETYMEQDEGDEAESVFLS 186 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVP 149 I YP ++ Y +S+ + + + Sbjct: 187 AIASYPSNEE----LYRAAISFYEETKQLD 212 >gi|149242440|ref|XP_001526467.1| hypothetical protein LELG_03025 [Lodderomyces elongisporus NRRL YB-4239] gi|146450590|gb|EDK44846.1| hypothetical protein LELG_03025 [Lodderomyces elongisporus NRRL YB-4239] Length = 740 Score = 36.2 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 38/141 (26%), Gaps = 28/141 (19%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109 D Y + + +F+ AYE F Q P + Y + Sbjct: 251 DQSDAHSWYYLGRVHMIRGDFNAAYEAFQQAVNRDSRNP-TFWC-----SIGVLYYQISQ 304 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIV 166 Y+ A I P + V+Y +G Y I D L + Sbjct: 305 YRDALDAYTRAIRLNP---YISEVWYDLGTLYETCNNQISD----------ALDAYRQAE 351 Query: 167 ERYTNSPYVKGARFYVTVGRN 187 +P++ + + Sbjct: 352 RLDPGNPHI---KARLDQLIK 369 >gi|115529131|gb|AAI24745.1| LOC795096 protein [Danio rerio] Length = 445 Score = 36.2 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 46/160 (28%), Gaps = 21/160 (13%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF--NQCSRDFPFAGVARKSLLMSAF 102 + + + + +Y +K +N + + P L S F Sbjct: 210 KTAAEIDPNDLFLQSLYVLKKSEVKGENVDEEIQSLLEKSIETKNPSG-------LSSIF 262 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY------AQMIRDVPYDQRATK 156 Y ++ GE +P S V L ++ M D + + Sbjct: 263 YYYRNNSTEKGFYEGERVRKHFPTSTKV-----LKIVANLHKWKVYNMKADTEQRENLAR 317 Query: 157 LMLQYMSRIVERYTNSPYVKGARFYV-TVGRNQLAAKEVE 195 ++ ++ Y + VK A + N A E+ Sbjct: 318 KSIELFEELLTHYPDHLKVKLALASLHEYAHNTEKANEIY 357 >gi|28870275|ref|NP_792894.1| TPR domain-containing protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28853522|gb|AAO56589.1| TPR domain protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 389 Score = 36.2 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 18/186 (9%), Positives = 59/186 (31%), Gaps = 39/186 (20%) Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 ++ L A + G + A + + + P + +++ +++ + Sbjct: 214 QNQLQLARLYLQTGDLEPAVAALQRATSLDPGNIEA-------ALAHIELLDR----KGQ 262 Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ---------LA------------AKE 193 + + ++ER S ++ A N LA + Sbjct: 263 AEQARSLFAGLLERNPGSSILQHALGM--WLLNHGQAEFALLSLAKATELAPDNNDYRYD 320 Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253 + + E AA + ++ + +A L++ + + + +++ + Sbjct: 321 LAVAL--HSLNELEAAQKQLTQIV---QNQPANRKARVLLIQYWKETGQLQNVQILLAEL 375 Query: 254 QERYPQ 259 +++ P Sbjct: 376 EQQNPD 381 >gi|34557949|ref|NP_907764.1| adenylate cyclase [Wolinella succinogenes DSM 1740] gi|34483667|emb|CAE10664.1| ADENYLATE CYCLASE [Wolinella succinogenes] Length = 713 Score = 36.2 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 16/38 (42%), Gaps = 3/38 (7%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFP---FAGVARK 95 + +A+ ++ F +A E F + P F+ + Sbjct: 655 FAEALALYRQGRFKEALEVFEKLKAQNPEKLFSLYTER 692 >gi|15801897|ref|NP_287917.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 EDL933] gi|15831107|ref|NP_309880.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. Sakai] gi|16129241|ref|NP_415796.1| TPR-repeats-containing protein [Escherichia coli str. K-12 substr. MG1655] gi|26247613|ref|NP_753653.1| tetratricopeptide repeat protein [Escherichia coli CFT073] gi|74312348|ref|YP_310767.1| tetratricopeptide repeat-containing protein [Shigella sonnei Ss046] gi|89108126|ref|AP_001906.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110] gi|91210574|ref|YP_540560.1| tetratricopeptide repeat protein [Escherichia coli UTI89] gi|110641515|ref|YP_669245.1| tetratricopeptide repeat protein [Escherichia coli 536] gi|157157418|ref|YP_001462579.1| tetratricopeptide repeat protein [Escherichia coli E24377A] gi|157160787|ref|YP_001458105.1| tetratricopeptide repeat protein [Escherichia coli HS] gi|168749091|ref|ZP_02774113.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4113] gi|168755950|ref|ZP_02780957.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4401] gi|168762718|ref|ZP_02787725.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4501] gi|168769351|ref|ZP_02794358.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4486] gi|168775094|ref|ZP_02800101.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4196] gi|168784027|ref|ZP_02809034.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4076] gi|168788404|ref|ZP_02813411.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC869] gi|168799579|ref|ZP_02824586.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC508] gi|170020354|ref|YP_001725308.1| tetratricopeptide repeat protein [Escherichia coli ATCC 8739] gi|170080959|ref|YP_001730279.1| hypothetical protein ECDH10B_1397 [Escherichia coli str. K-12 substr. DH10B] gi|170683676|ref|YP_001743903.1| tetratricopeptide repeat protein [Escherichia coli SMS-3-5] gi|187730544|ref|YP_001880112.1| tetratricopeptide repeat protein [Shigella boydii CDC 3083-94] gi|188496187|ref|ZP_03003457.1| tetratricopeptide repeat protein [Escherichia coli 53638] gi|191171105|ref|ZP_03032656.1| tetratricopeptide repeat protein [Escherichia coli F11] gi|194433842|ref|ZP_03066116.1| tetratricopeptide repeat protein [Shigella dysenteriae 1012] gi|194436935|ref|ZP_03069034.1| tetratricopeptide repeat protein [Escherichia coli 101-1] gi|195939724|ref|ZP_03085106.1| hypothetical protein EscherichcoliO157_25535 [Escherichia coli O157:H7 str. EC4024] gi|208811084|ref|ZP_03252917.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4206] gi|208816308|ref|ZP_03257487.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4045] gi|208821968|ref|ZP_03262288.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4042] gi|209396639|ref|YP_002270336.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4115] gi|209918521|ref|YP_002292605.1| tetratricopeptide repeat protein [Escherichia coli SE11] gi|215486577|ref|YP_002329008.1| tetratricopeptide repeat protein [Escherichia coli O127:H6 str. E2348/69] gi|217329141|ref|ZP_03445221.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. TW14588] gi|218553836|ref|YP_002386749.1| hypothetical protein ECIAI1_1303 [Escherichia coli IAI1] gi|218689272|ref|YP_002397484.1| tetratricopeptide repeat protein [Escherichia coli ED1a] gi|218694855|ref|YP_002402522.1| tetratricopeptide repeat protein [Escherichia coli 55989] gi|227886286|ref|ZP_04004091.1| lipopolysaccharide N-acetylglucosaminyltransferase [Escherichia coli 83972] gi|237705307|ref|ZP_04535788.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|238900515|ref|YP_002926311.1| hypothetical protein BWG_1111 [Escherichia coli BW2952] gi|253773720|ref|YP_003036551.1| tetratricopeptide repeat protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161360|ref|YP_003044468.1| tetratricopeptide repeat protein [Escherichia coli B str. REL606] gi|254792870|ref|YP_003077707.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. TW14359] gi|256018471|ref|ZP_05432336.1| tetratricopeptide repeat protein [Shigella sp. D9] gi|256023009|ref|ZP_05436874.1| tetratricopeptide repeat protein [Escherichia sp. 4_1_40B] gi|260854978|ref|YP_003228869.1| hypothetical protein ECO26_1846 [Escherichia coli O26:H11 str. 11368] gi|260867729|ref|YP_003234131.1| hypothetical protein ECO111_1661 [Escherichia coli O111:H- str. 11128] gi|261224265|ref|ZP_05938546.1| hypothetical protein EscherichiacoliO157_06625 [Escherichia coli O157:H7 str. FRIK2000] gi|261257479|ref|ZP_05950012.1| hypothetical protein EscherichiacoliO157EcO_16902 [Escherichia coli O157:H7 str. FRIK966] gi|291282369|ref|YP_003499187.1| hypothetical protein G2583_1621 [Escherichia coli O55:H7 str. CB9615] gi|293433641|ref|ZP_06662069.1| yciM protein [Escherichia coli B088] gi|300819007|ref|ZP_07099211.1| tetratricopeptide repeat protein [Escherichia coli MS 107-1] gi|300904929|ref|ZP_07122747.1| tetratricopeptide repeat protein [Escherichia coli MS 84-1] gi|300919464|ref|ZP_07135965.1| tetratricopeptide repeat protein [Escherichia coli MS 115-1] gi|300926666|ref|ZP_07142442.1| tetratricopeptide repeat protein [Escherichia coli MS 182-1] gi|300927789|ref|ZP_07143353.1| tetratricopeptide repeat protein [Escherichia coli MS 187-1] gi|300948358|ref|ZP_07162464.1| tetratricopeptide repeat protein [Escherichia coli MS 116-1] gi|300954528|ref|ZP_07166975.1| tetratricopeptide repeat protein [Escherichia coli MS 175-1] gi|300971709|ref|ZP_07171582.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1] gi|300971809|ref|ZP_07171643.1| tetratricopeptide repeat protein [Escherichia coli MS 200-1] gi|301017636|ref|ZP_07182310.1| tetratricopeptide repeat protein [Escherichia coli MS 69-1] gi|301022781|ref|ZP_07186623.1| tetratricopeptide repeat protein [Escherichia coli MS 196-1] gi|301046124|ref|ZP_07193299.1| tetratricopeptide repeat protein [Escherichia coli MS 185-1] gi|301304377|ref|ZP_07210490.1| tetratricopeptide repeat protein [Escherichia coli MS 124-1] gi|301326991|ref|ZP_07220280.1| tetratricopeptide repeat protein [Escherichia coli MS 78-1] gi|301647223|ref|ZP_07247042.1| tetratricopeptide repeat protein [Escherichia coli MS 146-1] gi|306813694|ref|ZP_07447875.1| tetratricopeptide repeat protein [Escherichia coli NC101] gi|307137921|ref|ZP_07497277.1| tetratricopeptide repeat protein [Escherichia coli H736] gi|307309965|ref|ZP_07589615.1| tetratricopeptide repeat protein [Escherichia coli W] gi|309793245|ref|ZP_07687672.1| tetratricopeptide repeat protein [Escherichia coli MS 145-7] gi|312971472|ref|ZP_07785647.1| tetratricopeptide repeat family protein [Escherichia coli 1827-70] gi|331641843|ref|ZP_08342978.1| putative heat shock protein [Escherichia coli H736] gi|331652323|ref|ZP_08353342.1| putative heat shock protein [Escherichia coli M718] gi|331657330|ref|ZP_08358292.1| putative heat shock protein [Escherichia coli TA206] gi|331672808|ref|ZP_08373594.1| putative heat shock protein [Escherichia coli TA280] gi|331677061|ref|ZP_08377757.1| putative heat shock protein [Escherichia coli H591] gi|332279526|ref|ZP_08391939.1| tetratricopeptide repeat protein [Shigella sp. D9] gi|77416653|sp|P0AB60|YCIM_ECO57 RecName: Full=Uncharacterized protein yciM; Flags: Precursor gi|77416654|sp|P0AB59|YCIM_ECOL6 RecName: Full=Uncharacterized protein yciM; Flags: Precursor gi|77416655|sp|P0AB58|YCIM_ECOLI RecName: Full=Uncharacterized protein yciM; Flags: Precursor gi|12515512|gb|AAG56533.1|AE005379_1 putative heat shock protein [Escherichia coli O157:H7 str. EDL933] gi|26108015|gb|AAN80215.1|AE016760_74 Hypothetical protein yciM precursor [Escherichia coli CFT073] gi|1742094|dbj|BAA14834.1| conserved hypothetical protein [Escherichia coli str. K12 substr. W3110] gi|2367116|gb|AAC74362.1| TPR-repeats-containing protein [Escherichia coli str. K-12 substr. MG1655] gi|13361318|dbj|BAB35276.1| putative heat shock protein [Escherichia coli O157:H7 str. Sakai] gi|73855825|gb|AAZ88532.1| putative heat shock protein [Shigella sonnei Ss046] gi|91072148|gb|ABE07029.1| putative heat shock protein [Escherichia coli UTI89] gi|110343107|gb|ABG69344.1| hypothetical protein YciM precursor [Escherichia coli 536] gi|157066467|gb|ABV05722.1| tetratricopeptide repeat protein [Escherichia coli HS] gi|157079448|gb|ABV19156.1| tetratricopeptide repeat protein [Escherichia coli E24377A] gi|169755282|gb|ACA77981.1| Tetratricopeptide TPR_2 repeat protein [Escherichia coli ATCC 8739] gi|169888794|gb|ACB02501.1| conserved protein [Escherichia coli str. K-12 substr. DH10B] gi|170521394|gb|ACB19572.1| tetratricopeptide repeat protein [Escherichia coli SMS-3-5] gi|187427536|gb|ACD06810.1| tetratricopeptide repeat protein [Shigella boydii CDC 3083-94] gi|187769262|gb|EDU33106.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4196] gi|188016626|gb|EDU54748.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4113] gi|188491386|gb|EDU66489.1| tetratricopeptide repeat protein [Escherichia coli 53638] gi|188998726|gb|EDU67712.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4076] gi|189356792|gb|EDU75211.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4401] gi|189361584|gb|EDU80003.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4486] gi|189367076|gb|EDU85492.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4501] gi|189371824|gb|EDU90240.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC869] gi|189377972|gb|EDU96388.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC508] gi|190908837|gb|EDV68425.1| tetratricopeptide repeat protein [Escherichia coli F11] gi|194417945|gb|EDX34040.1| tetratricopeptide repeat protein [Shigella dysenteriae 1012] gi|194423918|gb|EDX39906.1| tetratricopeptide repeat protein [Escherichia coli 101-1] gi|208724590|gb|EDZ74298.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4206] gi|208732956|gb|EDZ81644.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4045] gi|208742091|gb|EDZ89773.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4042] gi|209158039|gb|ACI35472.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4115] gi|209771898|gb|ACI84261.1| putative heat shock protein [Escherichia coli] gi|209771900|gb|ACI84262.1| putative heat shock protein [Escherichia coli] gi|209771902|gb|ACI84263.1| putative heat shock protein [Escherichia coli] gi|209771904|gb|ACI84264.1| putative heat shock protein [Escherichia coli] gi|209771906|gb|ACI84265.1| putative heat shock protein [Escherichia coli] gi|209911780|dbj|BAG76854.1| putative heat shock protein [Escherichia coli SE11] gi|215264649|emb|CAS09020.1| predicted protein [Escherichia coli O127:H6 str. E2348/69] gi|217317580|gb|EEC26008.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. TW14588] gi|218351587|emb|CAU97299.1| conserved hypothetical protein [Escherichia coli 55989] gi|218360604|emb|CAQ98162.1| conserved hypothetical protein [Escherichia coli IAI1] gi|218426836|emb|CAR07688.2| conserved hypothetical protein [Escherichia coli ED1a] gi|222033086|emb|CAP75826.1| Uncharacterized protein yciM [Escherichia coli LF82] gi|226900064|gb|EEH86323.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|227836490|gb|EEJ46956.1| lipopolysaccharide N-acetylglucosaminyltransferase [Escherichia coli 83972] gi|238860472|gb|ACR62470.1| conserved protein [Escherichia coli BW2952] gi|253324764|gb|ACT29366.1| Tetratricopeptide domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973261|gb|ACT38932.1| hypothetical protein ECB_01257 [Escherichia coli B str. REL606] gi|253977475|gb|ACT43145.1| hypothetical protein ECD_01257 [Escherichia coli BL21(DE3)] gi|254592270|gb|ACT71631.1| conserved protein [Escherichia coli O157:H7 str. TW14359] gi|257753627|dbj|BAI25129.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368] gi|257764085|dbj|BAI35580.1| conserved predicted protein [Escherichia coli O111:H- str. 11128] gi|260449588|gb|ACX40010.1| Tetratricopeptide domain protein [Escherichia coli DH1] gi|290762242|gb|ADD56203.1| hypothetical protein G2583_1621 [Escherichia coli O55:H7 str. CB9615] gi|291324460|gb|EFE63882.1| yciM protein [Escherichia coli B088] gi|294493956|gb|ADE92712.1| tetratricopeptide repeat protein [Escherichia coli IHE3034] gi|299881082|gb|EFI89293.1| tetratricopeptide repeat protein [Escherichia coli MS 196-1] gi|300301857|gb|EFJ58242.1| tetratricopeptide repeat protein [Escherichia coli MS 185-1] gi|300309315|gb|EFJ63835.1| tetratricopeptide repeat protein [Escherichia coli MS 200-1] gi|300318503|gb|EFJ68287.1| tetratricopeptide repeat protein [Escherichia coli MS 175-1] gi|300400130|gb|EFJ83668.1| tetratricopeptide repeat protein [Escherichia coli MS 69-1] gi|300403078|gb|EFJ86616.1| tetratricopeptide repeat protein [Escherichia coli MS 84-1] gi|300411195|gb|EFJ94733.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1] gi|300413486|gb|EFJ96796.1| tetratricopeptide repeat protein [Escherichia coli MS 115-1] gi|300417332|gb|EFK00643.1| tetratricopeptide repeat protein [Escherichia coli MS 182-1] gi|300452119|gb|EFK15739.1| tetratricopeptide repeat protein [Escherichia coli MS 116-1] gi|300464182|gb|EFK27675.1| tetratricopeptide repeat protein [Escherichia coli MS 187-1] gi|300528468|gb|EFK49530.1| tetratricopeptide repeat protein [Escherichia coli MS 107-1] gi|300840364|gb|EFK68124.1| tetratricopeptide repeat protein [Escherichia coli MS 124-1] gi|300846374|gb|EFK74134.1| tetratricopeptide repeat protein [Escherichia coli MS 78-1] gi|301074585|gb|EFK89391.1| tetratricopeptide repeat protein [Escherichia coli MS 146-1] gi|305852968|gb|EFM53413.1| tetratricopeptide repeat protein [Escherichia coli NC101] gi|306909683|gb|EFN40177.1| tetratricopeptide repeat protein [Escherichia coli W] gi|307553341|gb|ADN46116.1| tetratricopeptide repeat protein [Escherichia coli ABU 83972] gi|307627143|gb|ADN71447.1| tetratricopeptide repeat protein [Escherichia coli UM146] gi|308122832|gb|EFO60094.1| tetratricopeptide repeat protein [Escherichia coli MS 145-7] gi|309701580|emb|CBJ00887.1| tetratricopeptide repeat protein [Escherichia coli ETEC H10407] gi|310336069|gb|EFQ01269.1| tetratricopeptide repeat family protein [Escherichia coli 1827-70] gi|312945917|gb|ADR26744.1| tetratricopeptide repeat protein [Escherichia coli O83:H1 str. NRG 857C] gi|313848615|emb|CAQ31785.2| conserved protein [Escherichia coli BL21(DE3)] gi|315060533|gb|ADT74860.1| Predicted N-acetylglucosaminyl transferase [Escherichia coli W] gi|315135918|dbj|BAJ43077.1| hypothetical protein ECDH1ME8569_1221 [Escherichia coli DH1] gi|315254320|gb|EFU34288.1| tetratricopeptide repeat protein [Escherichia coli MS 85-1] gi|315289121|gb|EFU48519.1| tetratricopeptide repeat protein [Escherichia coli MS 110-3] gi|315295312|gb|EFU54642.1| tetratricopeptide repeat protein [Escherichia coli MS 153-1] gi|315297196|gb|EFU56476.1| tetratricopeptide repeat protein [Escherichia coli MS 16-3] gi|315619361|gb|EFU99905.1| tetratricopeptide repeat family protein [Escherichia coli 3431] gi|320177284|gb|EFW52289.1| tetratricopeptide repeat protein [Shigella dysenteriae CDC 74-1112] gi|320189967|gb|EFW64619.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC1212] gi|320195705|gb|EFW70330.1| tetratricopeptide repeat protein [Escherichia coli WV_060327] gi|320199316|gb|EFW73907.1| tetratricopeptide repeat protein [Escherichia coli EC4100B] gi|320637177|gb|EFX07003.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. G5101] gi|320642543|gb|EFX11791.1| tetratricopeptide repeat protein [Escherichia coli O157:H- str. 493-89] gi|320647896|gb|EFX16604.1| tetratricopeptide repeat protein [Escherichia coli O157:H- str. H 2687] gi|320653498|gb|EFX21603.1| tetratricopeptide repeat protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659198|gb|EFX26787.1| tetratricopeptide repeat protein [Escherichia coli O55:H7 str. USDA 5905] gi|320663991|gb|EFX31178.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. LSU-61] gi|323153286|gb|EFZ39544.1| tetratricopeptide repeat family protein [Escherichia coli EPECa14] gi|323172362|gb|EFZ57999.1| tetratricopeptide repeat family protein [Escherichia coli LT-68] gi|323179766|gb|EFZ65327.1| tetratricopeptide repeat family protein [Escherichia coli 1180] gi|323187513|gb|EFZ72822.1| tetratricopeptide repeat family protein [Escherichia coli RN587/1] gi|323378905|gb|ADX51173.1| tetratricopeptide repeat protein [Escherichia coli KO11] gi|323942397|gb|EGB38567.1| TPR repeat-containing protein [Escherichia coli E482] gi|323947437|gb|EGB43441.1| TPR repeat-containing protein [Escherichia coli H120] gi|323953847|gb|EGB49648.1| TPR repeat-containing protein [Escherichia coli H263] gi|323962582|gb|EGB58162.1| TPR repeat-containing protein [Escherichia coli H489] gi|323973478|gb|EGB68664.1| TPR repeat-containing protein [Escherichia coli TA007] gi|324006106|gb|EGB75325.1| tetratricopeptide repeat protein [Escherichia coli MS 57-2] gi|324011303|gb|EGB80522.1| tetratricopeptide repeat protein [Escherichia coli MS 60-1] gi|324018891|gb|EGB88110.1| tetratricopeptide repeat protein [Escherichia coli MS 117-3] gi|324117526|gb|EGC11432.1| TPR repeat-containing protein [Escherichia coli E1167] gi|326341058|gb|EGD64851.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. 1125] gi|326343298|gb|EGD67065.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. 1044] gi|331038641|gb|EGI10861.1| putative heat shock protein [Escherichia coli H736] gi|331050601|gb|EGI22659.1| putative heat shock protein [Escherichia coli M718] gi|331055578|gb|EGI27587.1| putative heat shock protein [Escherichia coli TA206] gi|331070029|gb|EGI41398.1| putative heat shock protein [Escherichia coli TA280] gi|331075750|gb|EGI47048.1| putative heat shock protein [Escherichia coli H591] gi|332091675|gb|EGI96755.1| tetratricopeptide repeat family protein [Shigella boydii 5216-82] gi|332098116|gb|EGJ03089.1| tetratricopeptide repeat family protein [Shigella dysenteriae 155-74] gi|332101878|gb|EGJ05224.1| tetratricopeptide repeat protein [Shigella sp. D9] gi|332342874|gb|AEE56208.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 389 Score = 36.2 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 36/186 (19%) Query: 64 AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + +A + FNQ DF + + + A ++Q+A + E + Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQA-----TSEWQKAIDVAERLV 168 Query: 122 TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + + V+ ++ + + + D+ K NS Sbjct: 169 KLGKDKQRVEIAHFYCELALQHM-ASDDLDRAMTLLKKGAAADK-------NS------- 213 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 A + +GR ++ +GEY A+ Q V++ D E E + L Y Sbjct: 214 ----------ARVSIMMGRVFMAKGEYAKAVESLQRVIS--QDRELVSETLEMLQTCYQQ 261 Query: 240 LALMDE 245 L E Sbjct: 262 LGKTAE 267 >gi|297559491|ref|YP_003678465.1| XRE family transcriptional regulator [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843939|gb|ADH65959.1| transcriptional regulator, XRE family [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 401 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 2/64 (3%) Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR--LVEAYVALALMDEAR 247 A EV R Y + + A+P VL Y E A+ L AY +EA Sbjct: 294 AELEVMDSRVYTELRRPLRAVPLLSRVLREYPATSTRERALYESWLAVAYADANEPEEAA 353 Query: 248 EVVS 251 V + Sbjct: 354 RVAA 357 >gi|296505576|ref|YP_003667276.1| TPR repeat-containing protein [Bacillus thuringiensis BMB171] gi|296326628|gb|ADH09556.1| TPR repeat-containing protein [Bacillus thuringiensis BMB171] Length = 467 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 76/224 (33%), Gaps = 53/224 (23%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 E+A +++ +A ++D+P ++G A + +G +A L E Sbjct: 119 EEANRYIRNGQLEEAIATLEIVTKDYPEFWSGHN-----NLAIAHFQSGNVDKALKLTEM 173 Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS------- 172 + + P + + + + Y K + ++V Y S Sbjct: 174 ILEKNPGN--------IHALCNTLIFL---YSIGEHKQVEALAGQLVSVYPISFEHRLKL 222 Query: 173 -------PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA--------AIPRFQLVL 217 Y + A + + + Q E ++ YY Y A A +Q V+ Sbjct: 223 GTTLATIGYFEHAYKWFKLLKRQ--GYEGDVSFYYWF--AYSAYMVKDQQLAEKMWQYVV 278 Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVV-SLIQERYPQG 260 + D + E + AL L DE + V+ +++ + Q Sbjct: 279 ELHPDKKG--------KEPWNALNLADEGQNVLFEELRKSFQQS 314 >gi|296314211|ref|ZP_06864152.1| putative periplasmic protein [Neisseria polysaccharea ATCC 43768] gi|296839110|gb|EFH23048.1| putative periplasmic protein [Neisseria polysaccharea ATCC 43768] Length = 237 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 7/57 (12%) Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266 RF+ D+ A EAM ++ E L D AR + + YP A+ Sbjct: 181 ANRFK-------DSPTAPEAMFKIGECQYRLQQKDIARATWLSLIQTYPSSPAAKRA 230 >gi|297588230|ref|ZP_06946873.1| LemA family protein [Finegoldia magna ATCC 53516] gi|297573603|gb|EFH92324.1| LemA family protein [Finegoldia magna ATCC 53516] Length = 184 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 7/71 (9%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 L M+ +VERY + + T ++LA E I +R Y + + Sbjct: 96 KALNGMNVVVERYPE----LKSDAHFTQLMDELAGSENRIA---TERKNYNTVVKSYNQK 148 Query: 217 LANYSDAEHAE 227 + + A Sbjct: 149 VKRFPTVIFAR 159 >gi|196013896|ref|XP_002116808.1| hypothetical protein TRIADDRAFT_60819 [Trichoplax adhaerens] gi|190580526|gb|EDV20608.1| hypothetical protein TRIADDRAFT_60819 [Trichoplax adhaerens] Length = 1372 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 54/162 (33%), Gaps = 34/162 (20%) Query: 59 EVYEK-AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGK 109 ++Y + ++ + ++A + + + P VA +S V + K Sbjct: 624 KLYSNIGLAYMHQGKHNEAIAMYEKSLKIRMSVLDCNHP--DVA-QSYDNMGDVYSNQNK 680 Query: 110 YQQAASLGEEYITQ------YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 Y++A SL + + + ++ I ++ Y+Q + ++ Sbjct: 681 YEEAISLYNKSLDIKLSVLDH-SHPDIA--------ISYSNIANIYYNQSKHEEAIRMYE 731 Query: 164 RIVE------RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 + ++ Y + P V + N + E I + Sbjct: 732 KSLKIQLSAVGY-DHPDVAKLYNNMGAIYNDQSKHEEAIAMF 772 >gi|114645545|ref|XP_520818.2| PREDICTED: transmembrane and TPR repeat-containing protein 1 isoform 2 [Pan troglodytes] Length = 882 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 52/155 (33%), Gaps = 30/155 (19%) Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP-YDQRAT 155 LL + + + +A ++ + P+ V +S + +Q Sbjct: 756 LLSAIYS--KQENHDKALDAIDKALQLKPKDPKV--------ISELFFTKGNQLREQNLL 805 Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVG-RNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 + V+ + A+ ++ +G + +G+YV+A ++ Sbjct: 806 DKAFESYRVAVQLNPD-----QAQAWMNMGGIQHI-------------KGKYVSARAYYE 847 Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249 L D++ +E +A+L L + E + Sbjct: 848 RALQLVPDSKLLKENLAKLDRLEKRLQEVREKDQT 882 >gi|86606649|ref|YP_475412.1| TPR repeat-containing protein [Synechococcus sp. JA-3-3Ab] gi|86555191|gb|ABD00149.1| tetratricopeptide repeat protein [Synechococcus sp. JA-3-3Ab] Length = 272 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 70/208 (33%), Gaps = 50/208 (24%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLG 117 ++E+A +F++A +++Q + P + + + S + Q+A Sbjct: 45 LFEEAFAATNRGDFARAEAFWSQLLQRQPDNPALWSNR-----GNARVSQNRLQEALEDY 99 Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 E I P + + Y ++ + + + + R+++ N Sbjct: 100 AEAIRLAPNAPD-PY------LNRGTALEGLGR----WQEAIADYERVLQLDPN-----D 143 Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEA 236 A Y RG AA+ +Q LA+Y E A + +A Sbjct: 144 AAA-------------------YNNRGNAEAALGEWQQALADYRRATELAPD--YAFAQA 182 Query: 237 YVAL-----ALMDEAREVVSLIQERYPQ 259 AL + A ++ + +YP+ Sbjct: 183 NYALCLYQVGETEAALRLMRALVRKYPK 210 >gi|300865558|ref|ZP_07110337.1| TPR repeat-containing protein [Oscillatoria sp. PCC 6506] gi|300336430|emb|CBN55487.1| TPR repeat-containing protein [Oscillatoria sp. PCC 6506] Length = 176 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 52/146 (35%), Gaps = 30/146 (20%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM---------SAFV 103 + +E YE ++++++ +++A F + + ++ + F Sbjct: 48 EKGTAQEYYELGSIYVEKKLYAQATSLFQKALK-------SKDLQVEEDAAIIYNALGFA 100 Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163 + +Y A +E I P DYV L +++ + + T L+ Sbjct: 101 HFGQEQYDIAIRQYKEAIRLKP-----DYVTALNNLAHTYERK------KLTTQALEMYE 149 Query: 164 RIVERYTNSPYVKGARFYVTVGRNQL 189 ++ N+P A+ R +L Sbjct: 150 ESLKLEPNNP---TAKRRSESLRKRL 172 >gi|229199131|ref|ZP_04325814.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus cereus m1293] gi|228584402|gb|EEK42537.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus cereus m1293] Length = 273 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 25/66 (37%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 +Q+ K LT S ++ L + + + L E+ EKA L+++ Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60 Query: 76 AYEYFN 81 + F Sbjct: 61 EVKKFQ 66 >gi|302036814|ref|YP_003797136.1| hypothetical protein NIDE1468 [Candidatus Nitrospira defluvii] gi|190343228|gb|ACE75616.1| exported protein [Candidatus Nitrospira defluvii] gi|300604878|emb|CBK41211.1| exported protein of unknown function, TPR-like [Candidatus Nitrospira defluvii] Length = 554 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 79/247 (31%), Gaps = 54/247 (21%) Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79 Y F +T+ +A+ L + D + + + +L + + +A Sbjct: 21 YFFTVTVLTIVAMALLPCSIQAQEPDAEV-----------LVAEGILAYDAKRYEEAISL 69 Query: 80 FNQCSRDFPFAGVARKSL--LMSAFVQYSAGKYQQAASLGEEYITQY---PESKNVDYVY 134 F+Q P R++ A + G+ +QA + T + P + V Sbjct: 70 FSQAVARDP-----RQARGFYYLALSHLARGQAEQAIAPL---TTLHVLRPSDLD---VT 118 Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194 Y +G ++ R + + + + R L Sbjct: 119 YQLGTAHFA--------VRQYDKAAPLLEEVFRQEPD--------------RENLG---F 153 Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254 +G + +Y +A + ++ SD++ + A+ A L L D+A ++ Q Sbjct: 154 YVGLLRYHQKDYDSAAAALSVNVS--SDSDLRQLALFYRGLALGVLGLSDQALSELASAQ 211 Query: 255 ERYPQGY 261 P Sbjct: 212 RVQPSSP 218 >gi|145591788|ref|YP_001153790.1| TPR repeat-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145283556|gb|ABP51138.1| Tetratricopeptide TPR_2 repeat protein [Pyrobaculum arsenaticum DSM 13514] Length = 637 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 21/70 (30%), Gaps = 4/70 (5%) Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN----QCSR 85 IA L + S++ + + + Y A + ++ +A Y + Sbjct: 550 IASVALAAADLTSAKRILPNCDCPILKVSVAYHIARSAYESGDYQEAIRYLELALAELKA 609 Query: 86 DFPFAGVARK 95 P + Sbjct: 610 QDPRYEYTPQ 619 >gi|150402060|ref|YP_001329354.1| hypothetical protein MmarC7_0133 [Methanococcus maripaludis C7] gi|150033090|gb|ABR65203.1| TPR repeat-containing protein [Methanococcus maripaludis C7] Length = 393 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 29/207 (14%), Positives = 67/207 (32%), Gaps = 56/207 (27%) Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 +Y+ + +K + + F++A + + + + + + Y+ +Y++A Sbjct: 143 KYKDVLAKKGTALVGLRKFNEALDIYEKILKI---SPYDTQVWKNIGNAFYTVKRYEKAI 199 Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174 + Y++++ + + V +S +R + T L ++++E + NS Sbjct: 200 QFYDMYLSEHKNN-------FQVTLSKGDALRKLGK----TNEALDLYTKVLENHINSHE 248 Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234 R +G Y + +Y E A+ L Sbjct: 249 P--------WCR---------VGLLYYENKDY--------------------ETALYYLE 271 Query: 235 EAYVALALMDE-----AREVVSLIQER 256 AY L AR + L Sbjct: 272 LAYERNPLNPSILVKIARTYIKLKNYN 298 >gi|118444627|ref|YP_877240.1| hypothetical protein NT01CX_1157 [Clostridium novyi NT] gi|118135083|gb|ABK62127.1| TPR-repeat-containing protein [Clostridium novyi NT] Length = 427 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 46/148 (31%), Gaps = 21/148 (14%) Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQN-FSKAYEYFNQC----SRDFPFAGVARKSLLMS 100 V + + + Y +L+ N +A + S + + + L M Sbjct: 296 VKSEDILKDDGVKHFYNTGREYLEANNKVEEAVSNLQKAYDYGSDSYLYGHI----LFML 351 Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160 + A EEY +Y + V Y + Y +DV + Sbjct: 352 GVSYQNKKDISNALKCYEEYEAKYSNENYIQEVLYRTAILY----KDVNL-----NKSKE 402 Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQ 188 Y ++++ Y + Y A + N+ Sbjct: 403 YAKKLMDNYPDCQY---ANSKIKDILNK 427 >gi|221068956|ref|ZP_03545061.1| pyruvate phosphate dikinase PEP/pyruvate-binding [Comamonas testosteroni KF-1] gi|220713979|gb|EED69347.1| pyruvate phosphate dikinase PEP/pyruvate-binding [Comamonas testosteroni KF-1] Length = 658 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 19/57 (33%), Gaps = 6/57 (10%) Query: 128 KNVDYVYYLVG------MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 Y ++ ++ + P D K L + +E++ SP V A Sbjct: 382 PFAAYADFMRANGLTERIARMRQQPGFPTDAGLRKQALSALQAEIEQWPVSPAVADA 438 >gi|42522989|ref|NP_968369.1| adventurous gliding motility protein U [Bdellovibrio bacteriovorus HD100] gi|39575194|emb|CAE79362.1| adventurous gliding motility protein U [Bdellovibrio bacteriovorus HD100] Length = 1237 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 5/90 (5%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + A + + + +N+ FP + + L + Y GK+ QA E Sbjct: 147 YFNNAFANQQIAQYKVSEILYNKLLTQFPKSPLIADGTLAIGELLYDQGKFAQAL---EH 203 Query: 120 YITQ--YPESKNVDYVYYLVGMSYAQMIRD 147 ++ +P S+ Y Y +Y M Sbjct: 204 FLRVEKFPNSRVYSYGMYKAAWAYYNMRDS 233 >gi|33862569|ref|NP_894129.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT 9313] gi|33640682|emb|CAE20471.1| TPR repeat [Prochlorococcus marinus str. MIT 9313] Length = 1057 Score = 35.9 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 47/151 (31%), Gaps = 36/151 (23%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG---- 108 + +Y Y + + +++ +A + + P A Y+ G Sbjct: 908 NPQYSNAYYNRGNAKSELKDYQEAIADYTKAIEIDP----------KDAPAYYNRGNAKS 957 Query: 109 ---KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 YQ+A + + I P+ + Y G++ D + + + ++ Sbjct: 958 ELKDYQEAIADYSKAIEINPQ---LALAYNNRGLAKY--------DSKDYQGTIADYNKA 1006 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196 +E Y + A KE+ + Sbjct: 1007 IEIDP--QYANAYKNRGN------AKKELGV 1029 Score = 35.1 bits (80), Expect = 9.9, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 68/233 (29%), Gaps = 44/233 (18%) Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95 +G + D D + + + +++ A +N+ P Sbjct: 516 IGDTEGAISDYSKAIEIDPKDADAFTNRGLAKYDSKDYQGAIADYNKAIEIDP------- 568 Query: 96 SLLMSAFVQY-----SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 L A+ G +Q A + + + P+ + Y G++ Sbjct: 569 -QLADAYNNRGLVKDELGDHQGAIADYNKSLDINPQ---LADAYNNRGLAKY-------- 616 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY----------- 199 D + + + ++ ++ +P+ A + +++L + I Y Sbjct: 617 DSKDYQGAIADYNKSLDI---NPHFALAYNNRGLAKDELGNHQGAIADYNKAIEIKPQYA 673 Query: 200 --YLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEA 246 Y RG + + Q +A YS + A A L A Sbjct: 674 NAYFNRGNAKSDLGDTQGAIAVYSKSIEINPQYAAAYYNRGNAKRKLGDNQGA 726 >gi|326912086|ref|XP_003202385.1| PREDICTED: tetratricopeptide repeat protein 26-like, partial [Meleagris gallopavo] Length = 541 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 69/204 (33%), Gaps = 24/204 (11%) Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124 L ++F+ A + + L + + G Y++A E Q Sbjct: 18 EELLAGRDFTGAIALLE--FQRHA-GEQQEDADLWIGYSAFHLGDYKRALEEYEALTKQP 74 Query: 125 PESKNVDYV-----YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 S +V +V Y+ +GM ++L + + + ++ + + + Sbjct: 75 SCSPDV-WVNLACTYFFLGM--YTQAEQAALKAPKSRLQNRLLFHLAHKFNDEKKLMSSH 131 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA---RLVEA 236 + ++ + + R Y AI ++ +L E +A + Sbjct: 132 QNLQDIT----EDQLSLASIHYMRSHYQEAIDIYKCILLE------NREYLALNVYVALC 181 Query: 237 YVALALMDEAREVVSLIQERYPQG 260 Y L D ++EV+++ ++ P Sbjct: 182 YYKLDYYDVSQEVLAVYLQQVPDS 205 >gi|322711339|gb|EFZ02913.1| NADPH oxidase regulator NoxR [Metarhizium anisopliae ARSEF 23] Length = 515 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 13/102 (12%), Positives = 31/102 (30%), Gaps = 18/102 (17%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 A+ F A F++ + K L + + G++++A + I Sbjct: 12 AALARYDNNEFDDALGEFDRIAD-------TSKILFNMGVIHATLGEHEKAVECYQRAIR 64 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + + Y+ G+S + + L + Sbjct: 65 L---DQYLAVAYFQQGVSNFLL--------GDFEEALANFND 95 >gi|307106595|gb|EFN54840.1| hypothetical protein CHLNCDRAFT_134871 [Chlorella variabilis] Length = 802 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 14/142 (9%), Positives = 31/142 (21%), Gaps = 42/142 (29%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA---------RKSLL------------ 98 ++ +A K + A + P + A R Sbjct: 434 LFNRAFSLDKLGRYDAALRDYEAALGLEPGSSYAHYNAGIVRDRLGQYAAAVAAFSAAIA 493 Query: 99 ----------MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148 F +Y+ A + + P YY ++ ++ Sbjct: 494 LEPRNADFYHNRGFSYRKMERYEDAVADYTRAVQFNPAHTK---AYYNRAVALERL---- 546 Query: 149 PYDQRATKLMLQYMSRIVERYT 170 R + S ++ Sbjct: 547 ----RRYQDAAADYSLVLRLDP 564 Score = 35.9 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 17/131 (12%) Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 K +F+ A E + + ++ A+ S G Y QA + E I PE+ Sbjct: 681 KAGSFAAAAEDYGRLIAL---GHATVRNFNSRAYCHASLGNYAQAVADYSEAIQLDPENV 737 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 + ++ G+S+ + + + + + + A + + Sbjct: 738 H---AFFNRGISHEKR--------GSHAAAVDDFTACIRLDPTN---AVAFYNRASCFDA 783 Query: 189 LAAKEVEIGRY 199 L E +G Y Sbjct: 784 LGQYERAVGDY 794 >gi|301611744|ref|XP_002935393.1| PREDICTED: hypothetical protein LOC100485775 [Xenopus (Silurana) tropicalis] Length = 1702 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 21/69 (30%), Gaps = 10/69 (14%) Query: 67 FLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 L +++++A +F + K+ L A A I Sbjct: 1058 LLNRKDYAQAIRHFTAALNVDPVY------IKAYLCRAQAFQQINDLNNAMKDITRAIHL 1111 Query: 124 YPESKNVDY 132 +P+S Y Sbjct: 1112 HPDSPQ-PY 1119 >gi|296133597|ref|YP_003640844.1| Tetratricopeptide TPR_2 repeat protein [Thermincola sp. JR] gi|296032175|gb|ADG82943.1| Tetratricopeptide TPR_2 repeat protein [Thermincola potens JR] Length = 215 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 14/122 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120 Y A+L ++ +A + Q R P K+ +V G Y++A + Sbjct: 108 YNLALLKIQVGKIDEAKKILEQIKRKRP---EDLKARATLGYVYAEKGLYEKALAEFRLV 164 Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 YP + ++ + G Y + D +Y R ++ + K A Sbjct: 165 EKYYPTNADL---MFQFGRVYEKQGDDA--------QAREYYYRALKFDPHMDKAKEALK 213 Query: 181 YV 182 + Sbjct: 214 KL 215 >gi|229133038|ref|ZP_04261879.1| TPR repeat-containing protein [Bacillus cereus BDRD-ST196] gi|228650456|gb|EEL06450.1| TPR repeat-containing protein [Bacillus cereus BDRD-ST196] Length = 891 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 44/134 (32%), Gaps = 16/134 (11%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102 + D D Y A + + +A + F Q + + ++ A Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQY 161 ++++A + + T+ +++ V YL G +S A V D + Sbjct: 651 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKGQLSTA----TVQLD-----KAESF 699 Query: 162 MSRIVERYTNSPYV 175 +++ +S Sbjct: 700 FKEAIKQ--DSKNA 711 >gi|17227857|ref|NP_484405.1| hypothetical protein all0361 [Nostoc sp. PCC 7120] gi|17129706|dbj|BAB72319.1| all0361 [Nostoc sp. PCC 7120] Length = 169 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 19/168 (11%), Positives = 56/168 (33%), Gaps = 35/168 (20%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83 L FS ++ + + + D ++ + + K+ +F A + + Sbjct: 14 LATLFSTSLILCICFGNSHPVAIVNAQTPD---AYKLVNQGIESYKKGDFHAAIKPWEA- 69 Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG----- 138 + ++ ++ ++N+ Y +G Sbjct: 70 ----------------ALDSYQKNNDFRN-IAII---------NENLARTYQQLGNKSLT 103 Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186 +SY + ++D + Q+ + + + ++ I + Y+NS K + + Sbjct: 104 LSYWEKVKDYYHSQKNLQKVGRILTEIAQIYSNSGQTKKSYQSFMWCK 151 >gi|228915968|ref|ZP_04079543.1| TPR domain protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228928414|ref|ZP_04091455.1| TPR domain protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228831461|gb|EEM77057.1| TPR domain protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228843786|gb|EEM88860.1| TPR domain protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 304 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 57/151 (37%), Gaps = 36/151 (23%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 +++K++ + +A E F + P + ++ A Y+ G+ ++A E ++ Sbjct: 75 GDIYMKQKKWEEAKEAFQKSISIQP----SDEAYHNVAVAHYNLGELEEA---SEFFLR- 126 Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183 + + DY+ Y SY + + D+ + K L +R Sbjct: 127 --AAGDSDYIMY----SYVKCLIDLGR-TKEAKEKLDAFNR------------------- 160 Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 N L E+ + Y++ Y AI F+ Sbjct: 161 ESDNFLG--EMMVADLYVELNCYKKAIEWFE 189 >gi|229094089|ref|ZP_04225173.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus cereus Rock3-42] gi|229187222|ref|ZP_04314367.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus cereus BGSC 6E1] gi|228596232|gb|EEK53907.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus cereus BGSC 6E1] gi|228689301|gb|EEL43120.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus cereus Rock3-42] Length = 273 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 25/66 (37%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 +Q+ K LT S ++ L + + + L E+ EKA L+++ Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60 Query: 76 AYEYFN 81 E F Sbjct: 61 KVEKFQ 66 >gi|262196419|ref|YP_003267628.1| serine/threonine protein kinase [Haliangium ochraceum DSM 14365] gi|262079766|gb|ACY15735.1| serine/threonine protein kinase [Haliangium ochraceum DSM 14365] Length = 1290 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 13/121 (10%) Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC-----SRDFPFAGVARKSLLMSAFVQY 105 T ++ + + ++ +A++YF Q P + + L A + Sbjct: 798 PTHPDTADSLHSLGNVSTQRGDYDEAWDYFEQALAVVSDALGPDHVDSMRPLTNMANLLQ 857 Query: 106 SAGKYQQAASLGEEYI-----TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA-TKLML 159 G+Y +A E + + P+ +V V L M+YA+MI D A + L Sbjct: 858 RRGRYDEARVYYERAMHAVERSLGPKHPDVAAV--LGNMAYAEMIAGQLDDAEAHYRRAL 915 Query: 160 Q 160 Sbjct: 916 D 916 >gi|218439610|ref|YP_002377939.1| hypothetical protein PCC7424_2659 [Cyanothece sp. PCC 7424] gi|218172338|gb|ACK71071.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424] Length = 565 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 26/135 (19%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++Q + +A + FNQ F ++ + K+ +A + E+ + Sbjct: 151 NLGKALAQQQRWQEAGQAFNQVIL---FDPDNAQAYTNLGNALFKQEKWHEAKKIYEKAL 207 Query: 122 TQYPESK----------------NVDYVYYLVGMS-------YAQMIRDVPYDQRATKLM 158 P+ N YL ++ + V Y+Q+ Sbjct: 208 ELTPKDALIHQRLAEILVEIGEFNSAETLYLKALALAPNQGDLYNGLGQVLYEQKKVDEA 267 Query: 159 LQYMSRIVERYTNSP 173 + + ++ N+P Sbjct: 268 INAYQKAIKLSPNNP 282 >gi|172038545|ref|YP_001805046.1| putative prenyltransferase [Cyanothece sp. ATCC 51142] gi|171699999|gb|ACB52980.1| putative prenyltransferase [Cyanothece sp. ATCC 51142] Length = 383 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 78/242 (32%), Gaps = 53/242 (21%) Query: 19 LYKFALTIFFS-IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77 + K L++ + I + + + E+ + ++ + ++ +A Sbjct: 23 ISKLTLSLLTTFILGSSITPVIASPDTSILVSQNYSKEQLDELLRRGRDYVDKGDYQRAI 82 Query: 78 EYFNQCSRDFPFAGVARKSLLM---------SAFVQYSAGKYQQAASLGEEYITQYPESK 128 + + + L A++ G YQ A ++ ++ + Sbjct: 83 ATYE------------QAASLDKDNARIFSGIAYLHSQQGNYQAAVKYYQQALSLDSSNA 130 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188 N YY +G S A I D A +Q + V+ Y Sbjct: 131 NF---YYALGDSLAN-IGDNNNAASAYYYAIQLNPQFVKSY------------------- 167 Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248 + +G L++ Y A ++ V+A + EA A + + + +D+A + Sbjct: 168 -----IGLGVVLLRQENYEGAAEAYKRVIALDPN---NPEAFAIMGSSLLQQKQLDQALQ 219 Query: 249 VV 250 + Sbjct: 220 YL 221 Score = 35.5 bits (81), Expect = 8.6, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 76/228 (33%), Gaps = 37/228 (16%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVA---------RKSLLMSAFVQYSAGKYQQAA 114 V+ L+++N+ A E + + P A ++ L A +QY Sbjct: 171 GVVLLRQENYEGAAEAYKRVIALDPNNPEAFAIMGSSLLQQKQLDQA-LQYLGN------ 223 Query: 115 SLGEEY-----ITQYPESKNVDYVYYLVG---MSYAQMIRDVPYDQRATKLMLQYMSRIV 166 E + + + Y G + Q+ R D TK+ L+ +RI Sbjct: 224 -AVERFSGDVDLRL-----LLATAYLQQGQLELGKEQLQRAERIDPSNTKIQLKI-ARIY 276 Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226 E N ++ + +GR L + +Y+ AI ++ ++ Sbjct: 277 EVQENLDEALKIYRRISYLNRKSPEAYAGVGRIQLAQKDYLGAIITYKDLIEIIPQ---N 333 Query: 227 EEAMARLVEAYVALALMDEARE---VVSLIQERYPQGYWARYVETLVK 271 E L A+ EA++ + + Y + V+ L+K Sbjct: 334 PEPYYYLGVAFKERQRNSEAKKALQYAKKLYQEYDNTEGIKKVDELLK 381 >gi|159028862|emb|CAO90667.1| mom72 [Microcystis aeruginosa PCC 7806] Length = 268 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 33/89 (37%), Gaps = 21/89 (23%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS-------AGKYQ 111 E Y + V L ++S A F Q A + A Y+ G+Y+ Sbjct: 44 EFYNRGVDRLTAGDYSGAIADFTQ----------ALQLEPKDADAYYNRGYAELVLGQYE 93 Query: 112 QAASLGEEYITQYPESKNV----DYVYYL 136 +A + + +T P N YV+YL Sbjct: 94 RAIADYTQALTINPNYVNALGNRCYVHYL 122 >gi|156352485|ref|XP_001622781.1| predicted protein [Nematostella vectensis] gi|156209395|gb|EDO30681.1| predicted protein [Nematostella vectensis] Length = 1641 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 25/195 (12%), Positives = 63/195 (32%), Gaps = 42/195 (21%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASL 116 + N+ +A F + + M A+ V S KY+ A + Sbjct: 999 SQGKYKDALNNYQRALSLFQKTGD--------ERGQAM-AYHGMGNVHMSQAKYEDALNN 1049 Query: 117 GEEYITQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS- 172 + ++ + ++ + Y Y +G + Q + + + + + Sbjct: 1050 YQHALSLFQKTGDESGQAYAYLGMGNVHFN--------QGKYEDAMNNYQHALRLFQKTG 1101 Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232 A+ Y+ + G + +G+Y A+ +Q L+ + +E+ Sbjct: 1102 DESGQAKAYLGM------------GDVHFNQGKYEDAMNNYQHALSLFQKTG--DES--G 1145 Query: 233 LVEAYVALALMDEAR 247 AY+ + ++ Sbjct: 1146 QASAYLGMGDAHWSQ 1160 >gi|85000805|ref|XP_955121.1| hypothetical protein [Theileria annulata strain Ankara] gi|65303267|emb|CAI75645.1| hypothetical protein, conserved [Theileria annulata] Length = 272 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 54/146 (36%), Gaps = 14/146 (9%) Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPF 89 A V +++ D +D+ Y E+ K+ N+++A +++ + F Sbjct: 73 ASNTTVNNPSENTFDTDVDNNLFGLPSPVYYKERGNECFKDNNYTEAIDWYTKALERLEF 132 Query: 90 AGVAR-KSLL--MSAFVQYSAGKYQQAASLGEE---YITQYPESKNVDYVYYLVGMSYAQ 143 + K+ + A + G+++ + S + + YP+ Y M+ + Sbjct: 133 SEDDILKAQIFCNRAACHQALGEWENSISDCNDALTFNDSYPK------AYLRRSMA-FE 185 Query: 144 MIRDVPYDQRATKLMLQYMSRIVERY 169 + + LQ S + E+Y Sbjct: 186 KTKFYQKSHSDLEKALQLDSSLEEKY 211 >gi|157825439|ref|YP_001493159.1| hypothetical protein A1C_01700 [Rickettsia akari str. Hartford] gi|157799397|gb|ABV74651.1| hypothetical protein A1C_01700 [Rickettsia akari str. Hartford] Length = 245 Score = 35.9 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 18/45 (40%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143 A Y K +A + +I +YP S + Y+ G + + Sbjct: 122 DLALAAYKDNKLTEAKDKFKNFIQKYPNSLLISNAYFWYGECFFK 166 Score = 35.9 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 35/108 (32%), Gaps = 20/108 (18%) Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 +++Y NS + A F+ + K +Y A + Sbjct: 135 EAKDKFKNFIQKYPNSLLISNAYFWYGEC--------------FFKHKDYNGAAVNY--- 177 Query: 217 LANYSDAE---HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261 L Y ++ + + + +L A L EA ++ + + +P Sbjct: 178 LKGYKESPKGAKSSDGLLKLAIALGELKKTQEACNILDKLDKDFPTNR 225 >gi|328875140|gb|EGG23505.1| hypothetical protein DFA_05638 [Dictyostelium fasciculatum] Length = 464 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 54/171 (31%), Gaps = 24/171 (14%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF-NQC----SRDFPFAGVARKSLL 98 D ++ + + + + + +L EQ KA F + P Sbjct: 299 EDSFIYKIDNSTIGDNYFRRGLCYLHEQQPDKAVLDFTEALNYLQEEEHP------SVKF 352 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMIRDVPYDQR 153 Y+ KY+ A +I P+ Y VY ++GM + +D Q+ Sbjct: 353 FRGRCYYAIQKYRAALEDFNTFIKYNPKHI-AAYEERRDVYSMLGM-HEHAEKDQKIVQK 410 Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN-----QLAAKEVEIGRY 199 + ++ Y N ++ + ++ E+E+ Y Sbjct: 411 DREKKHDQRLESIQMY-NEERLERIKRRNEDIAEKKRIIRMKQNEIEVADY 460 >gi|300870217|ref|YP_003785088.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] gi|300687916|gb|ADK30587.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] Length = 231 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 8/54 (14%), Positives = 23/54 (42%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 Y A + +++ N+++A ++ +P + ++ L + V +A Sbjct: 146 YNLANVLIEQTNYTEAATVLENFTKAYPKNYLTPQATLTLSDVYRKQNDKTKAI 199 >gi|197117647|ref|YP_002138074.1| TPR domain-containing protein [Geobacter bemidjiensis Bem] gi|197087007|gb|ACH38278.1| TPR domain protein [Geobacter bemidjiensis Bem] Length = 412 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 43/135 (31%), Gaps = 26/135 (19%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 E A + ++KA ++ P R+ LM Y Y AAS +E Sbjct: 70 EIAKRDMNAGRYAKAARSLSEARELLPGN---RELTLMRGVALYLDKDYLTAASEFKE-- 124 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181 + VD + YL + YD + L Y R E ++ + Sbjct: 125 ----AGEGVDPLIYL---------GKIGYDTGDLQGALSYWRRAREMEPDNKMLATLIAK 171 Query: 182 VTVGRNQLAAKEVEI 196 A +E+ + Sbjct: 172 --------AERELPV 178 >gi|170726232|ref|YP_001760258.1| TPR repeat-containing protein [Shewanella woodyi ATCC 51908] gi|169811579|gb|ACA86163.1| Tetratricopeptide TPR_2 repeat protein [Shewanella woodyi ATCC 51908] Length = 388 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 5/67 (7%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 D Y LKE ++ A Y + + ++ + A Q++ GK Sbjct: 300 DDPTPYNWYLLGRSSLKEGDYFSAIIYLEKFLEN----SPYYHQAYIELASAQHALGKTY 355 Query: 112 QAASLGE 118 A + Sbjct: 356 AAEKSLK 362 >gi|89271328|emb|CAJ82984.1| DnaJ (Hsp40) homolog, subfamily C, member 3 [Xenopus (Silurana) tropicalis] Length = 504 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 37/108 (34%), Gaps = 4/108 (3%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV-ARKSLLMSAFVQYSAGKYQQAASLGEEY 120 + A + E + A + + P + S + + +A + E+ Sbjct: 273 QAAEELIHEGRYEDALPKYEGILKTEPNVPYYSALVQERSCHCYSKSQQSTEAIRVCTEF 332 Query: 121 ITQYPESKNV--DYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 + Q P + N D Y++ Y + IRD Q+ + Q + Sbjct: 333 LQQEPNNVNALKDRAEAYILEEMYEEAIRDYETAQQNNENDKQIREGL 380 >gi|193062647|ref|ZP_03043741.1| tetratricopeptide repeat protein [Escherichia coli E22] gi|193069957|ref|ZP_03050905.1| tetratricopeptide repeat protein [Escherichia coli E110019] gi|194425776|ref|ZP_03058332.1| tetratricopeptide repeat protein [Escherichia coli B171] gi|260843628|ref|YP_003221406.1| hypothetical protein ECO103_1443 [Escherichia coli O103:H2 str. 12009] gi|192931769|gb|EDV84369.1| tetratricopeptide repeat protein [Escherichia coli E22] gi|192956710|gb|EDV87165.1| tetratricopeptide repeat protein [Escherichia coli E110019] gi|194415831|gb|EDX32097.1| tetratricopeptide repeat protein [Escherichia coli B171] gi|257758775|dbj|BAI30272.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009] gi|323162357|gb|EFZ48212.1| tetratricopeptide repeat family protein [Escherichia coli E128010] Length = 389 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 36/186 (19%) Query: 64 AVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 ++ + +A + FNQ DF + + + A ++Q+A + E + Sbjct: 114 GRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQA-----TSEWQKAIDVAERLV 168 Query: 122 TQYPESKNVDYVYYL--VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179 + + V+ ++ + + + D+ K NS Sbjct: 169 KLGKDKQRVEIAHFYCELALQHM-ASDDLDRAMTLLKKGAAADK-------NS------- 213 Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239 A + +GR ++ +GEY A+ Q V++ D E E + L Y Sbjct: 214 ----------ARVSIMMGRVFMAKGEYAKAVESLQRVIS--QDRELVSETLEMLQTCYQQ 261 Query: 240 LALMDE 245 L E Sbjct: 262 LGKTAE 267 >gi|317503869|ref|ZP_07961878.1| conserved hypothetical protein [Prevotella salivae DSM 15606] gi|315665025|gb|EFV04683.1| conserved hypothetical protein [Prevotella salivae DSM 15606] Length = 960 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 22/149 (14%), Positives = 51/149 (34%), Gaps = 29/149 (19%) Query: 69 KEQNFSKAYEYFNQCSRDFP------------------FAGVARKSLLMSAFVQYSAGKY 110 + +F+ A EY + R+ P F SL ++ ++ +Y Sbjct: 577 RRNDFTHAEEYLTRLRRECPKSQWTALLNDPYYQENARFGKHIEDSLYAVSYTAFNESRY 636 Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 + + + ++P+ N D +L +S K LQ ++ ++ + Sbjct: 637 HEVLANAQLSAKRFPKGANRDKFLFLSALSKLND--------GDAKGCLQDLNTLLSTHP 688 Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRY 199 S + A + + A K + ++ Sbjct: 689 ESRLGEMAGMIINGVK---AGKTLHGAKF 714 Score = 35.9 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 20/47 (42%) Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262 ++ +Y + H +EA L Y A E ++ ++ P+ W Sbjct: 554 LIQHYPNFAHIDEAFYHLYLLYARRNDFTHAEEYLTRLRRECPKSQW 600 >gi|297622676|ref|YP_003704110.1| TIGR02710 family CRISPR-associated protein [Truepera radiovictrix DSM 17093] gi|297163856|gb|ADI13567.1| CRISPR-associated protein, TIGR02710 family [Truepera radiovictrix DSM 17093] Length = 487 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 7/62 (11%) Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRD----FPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 Y+ A Q ++ A F + + F+ A+ S A+ + + +++ AA Sbjct: 199 YQTAKALYNAQEYTLAAREFIRIADRTGDVRRFSPYAKLSE---AYAAWLSNRFESAAHA 255 Query: 117 GE 118 E Sbjct: 256 FE 257 >gi|291288727|ref|YP_003505543.1| N-acetylmuramoyl-L-alanine amidase [Denitrovibrio acetiphilus DSM 12809] gi|290885887|gb|ADD69587.1| N-acetylmuramoyl-L-alanine amidase [Denitrovibrio acetiphilus DSM 12809] Length = 605 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 35/92 (38%), Gaps = 8/92 (8%) Query: 46 VYLDSVTDVRYQREVYEKAVLFL-------KEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98 +Y + +Y A + + + A + F + ++ +A + + Sbjct: 55 IYAKDPSGKLADDSLYYTARTYHRSYVRYKQRADLLNALKNFKLLASNY-QTRLASLAYI 113 Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 SA + Y A + ++ I+++P +++ Sbjct: 114 ESANLYEEQKDYPSARYMLKKLISRFPNTEDA 145 >gi|307152343|ref|YP_003887727.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822] gi|306982571|gb|ADN14452.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822] Length = 235 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 35/119 (29%), Gaps = 18/119 (15%) Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKYQ 111 V + ++ +E ++S A +Q P + + L+ + G++ Sbjct: 38 VESEEKLRISVKQKAQEGDYSGAIALLDQLIESHPESAIDYNNRGLM-----YFWQGQFF 92 Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 QA + I +K +D Y Y Q L ++ Sbjct: 93 QAIKDYNQAIEL---NKKLDQAYNNRANCYMA--------QGNWAEALTDYETAIDLNP 140 >gi|194334675|ref|YP_002016535.1| TPR repeat-containing protein [Prosthecochloris aestuarii DSM 271] gi|194312493|gb|ACF46888.1| Tetratricopeptide TPR_2 repeat protein [Prosthecochloris aestuarii DSM 271] Length = 201 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 57/166 (34%), Gaps = 30/166 (18%) Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150 + ++ + +Y A E+ ++ P+S G ++ + + Sbjct: 50 PDSPEAYIKLGTAHARQEQYDAAIDAYEKALSLDPDS----------GERVFPVLGAIAF 99 Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 ++ + L Y + + + L ++ G YLK + AI Sbjct: 100 NREEYEKALDYFHKSLAFSPE---------------DSLRFYDM--GNVYLKLEQNENAI 142 Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256 ++ + + EEA L +Y+ EA ++ S +QER Sbjct: 143 EAYRKAIEF---SVSFEEAYYNLAISYIRNGQKKEAEKIYSWLQER 185 >gi|167044017|gb|ABZ08703.1| putative TPR domain protein [uncultured marine crenarchaeote HF4000_APKG3K8] Length = 316 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 3/53 (5%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104 + E+++ A F+K NFS A + +++ P ++LL A Sbjct: 20 ANAESVEELHDVAYQFMKSGNFSDAIDTYSKILEMQPND---EQALLNRAIAY 69 >gi|147676599|ref|YP_001210814.1| hypothetical protein PTH_0264 [Pelotomaculum thermopropionicum SI] gi|146272696|dbj|BAF58445.1| hypothetical membrane protein [Pelotomaculum thermopropionicum SI] Length = 927 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 28/240 (11%), Positives = 72/240 (30%), Gaps = 34/240 (14%) Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY---SAGKYQQAAS 115 ++ ++A + ++ + + + + P+ + R+ + V + ++ Sbjct: 404 QLLQEAGEKYPQSYLARGIKAYEEVRGE-PYFEMERRKQQGNWDVYFYGDEQYDPEREIP 462 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT-KLMLQYMSRIVERYTNSP- 173 E+++ ++P D Y + Y I D T + L + + Sbjct: 463 GWEKFLAEFPGHPGADDAAYRLARCY--EIEGRWTDALNTLRKALSLPDGDIRYHAAGRL 520 Query: 174 -YVKGARFYVTVGRNQ----------------LAAKEVEIGRYYLKRGEYVAAIPRFQLV 216 YV R + L + + L+R Y + Sbjct: 521 VYVLDVRMTYDQLKELSQAREQSKKLDPSLKPLVDYSLAVKE--LRRDNYRQTAGMLEEF 578 Query: 217 LANYSDAEHAEEAMARLVEAYV-------ALALMDEAREVVSLIQERYPQGYWARYVETL 269 L Y D + A+ Y ++ A E ++ ++ ++ + + L Sbjct: 579 LKQYQDFGENQGALPFNQLNYQLKYDFRSSVKKQQAAVEELAALEVQWKKSGNPADLYRL 638 >gi|311744911|ref|ZP_07718696.1| hypothetical protein ALPR1_00295 [Algoriphagus sp. PR1] gi|126577414|gb|EAZ81634.1| hypothetical protein ALPR1_00295 [Algoriphagus sp. PR1] Length = 401 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 44/122 (36%), Gaps = 17/122 (13%) Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMS 100 +D D + + ++ K +N+ +A + ++ P Sbjct: 273 KDFSEAIKLDDMDPETFFYRGKVYGKLKNWKEAEKDLSKAIELDAQNP--------EYYL 324 Query: 101 AFVQ--YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 A Q Y + Q+A + +I PE+ + YY G++Y Q ++++ + K Sbjct: 325 ARGQNRYLSKALQEALADFTIFINLDPENPS---AYYHRGITY-QRLKEMDLACQDLKKA 380 Query: 159 LQ 160 Sbjct: 381 AD 382 >gi|119485213|ref|ZP_01619598.1| hypothetical protein L8106_07184 [Lyngbya sp. PCC 8106] gi|119457441|gb|EAW38566.1| hypothetical protein L8106_07184 [Lyngbya sp. PCC 8106] Length = 272 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 78/238 (32%), Gaps = 40/238 (16%) Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84 + FS+ + ++ +S V+ + +A F++A Y+ Q Sbjct: 10 FLVFSLQILGGYANPAYAASGSLAESTEIVQDVENLLNQAFDASNTGKFAEAETYWTQII 69 Query: 85 RDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-VGMSY 141 + +P + + + S K + A S + I P + + YL G++Y Sbjct: 70 KQYPDNAAMWSNRGNVRV-----SQNKIEAALSDYNKAIELAPNAPDP----YLNRGVAY 120 Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 ++ R + + + ++E + A Y G N A Sbjct: 121 ERLER--------WQDAIADYNHVLELS-----GEDAVAYNNRG-NAEAG---------- 156 Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259 G++ AAI ++ + A A A ++A + + +YP Sbjct: 157 -LGDWKAAIIDYETAAELDPNYAF---ARANYALALYQDGQTEKAIRTMKNLVRKYPN 210 >gi|157105060|ref|XP_001648699.1| DNA replication licensing factor MCM8 [Aedes aegypti] gi|108880194|gb|EAT44419.1| DNA replication licensing factor MCM8 [Aedes aegypti] Length = 845 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 36/93 (38%), Gaps = 15/93 (16%) Query: 178 ARFYVTVGRNQLAAKEVEIGRYY----------LKRGEYVAAIPRFQLVLANYSDAEHAE 227 A + + +L K + R L+ + A + R Q + + Sbjct: 663 ANEKMDLLPVELIQKYIAYARKNIHPKLTEAAALEIRNFYAEMRRAQQGMDSIPVTTRQL 722 Query: 228 EAMARLVEAYVALALMDE-----AREVVSLIQE 255 EA+ RL +A + L E A++V+++++ Sbjct: 723 EALVRLTQARARMDLESEATLQHAQDVIAILRY 755 >gi|50285201|ref|XP_445029.1| hypothetical protein [Candida glabrata CBS 138] gi|49524332|emb|CAG57929.1| unnamed protein product [Candida glabrata] Length = 1110 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 41/114 (35%), Gaps = 4/114 (3%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A L +++N+ + + F + P + + + Y+ A E + Sbjct: 188 RAKLMYQKKNYVASLKLFQELLVINP--VLKPDPRIGIGMCFWQLKDYKLAIQAWERALQ 245 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 P +K + L+G + + + D+ + ++ + YTNS Sbjct: 246 LDPNNKQAS-ILVLLGK-FHNSLTEAENDEDFKEKYAAALADLNTVYTNSKESP 297 >gi|116191669|ref|XP_001221647.1| hypothetical protein CHGG_05552 [Chaetomium globosum CBS 148.51] gi|88181465|gb|EAQ88933.1| hypothetical protein CHGG_05552 [Chaetomium globosum CBS 148.51] Length = 518 Score = 35.9 bits (82), Expect = 5.7, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 18/102 (17%) Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122 +A+ F F +A F++ S K L + + G+++QA + + Sbjct: 12 EALKFYDNNEFDEALASFDKVSD-------TSKILFNMGVINATLGQHEQAVECYQRALK 64 Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + + Y+ G+S +I D + L + Sbjct: 65 L---DQYLAVAYFQQGVSNF-LIGDF-------EEALANFND 95 >gi|323143609|ref|ZP_08078286.1| tol-pal system protein YbgF [Succinatimonas hippei YIT 12066] gi|322416672|gb|EFY07329.1| tol-pal system protein YbgF [Succinatimonas hippei YIT 12066] Length = 251 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 40/122 (32%), Gaps = 15/122 (12%) Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 T + Y+ A F+ N + A + F+ + +P + + VQY K Sbjct: 127 TADAQAKSAYDNAYKFVTANNLAAAEKEFSAYLQSYPDNSLTPNAWYWLGQVQYKQNKLD 186 Query: 112 QAASL---GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168 +A + P+ + Y +G+ + + Q+ ++ + Sbjct: 187 EARVSFLNVARFTAT-PKRPDS---LYKLGL--------ISKLKGDKDKAKQFFELVINK 234 Query: 169 YT 170 Y Sbjct: 235 YP 236 >gi|257463577|ref|ZP_05627969.1| TPR repeat-containing protein [Fusobacterium sp. D12] gi|317061132|ref|ZP_07925617.1| predicted protein [Fusobacterium sp. D12] gi|313686808|gb|EFS23643.1| predicted protein [Fusobacterium sp. D12] Length = 107 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 9/71 (12%) Query: 63 KAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 K + + + +S A + + +D P L + G +++A E Sbjct: 31 KGLNHEERKEWSSAIQELEKSRALQKDNP------LILKELGYCYAKQGDFEKARDCYER 84 Query: 120 YITQYPESKNV 130 + PE +N Sbjct: 85 VLQLEPEDRNA 95 >gi|255659101|ref|ZP_05404510.1| putative lipoprotein [Mitsuokella multacida DSM 20544] gi|260848545|gb|EEX68552.1| putative lipoprotein [Mitsuokella multacida DSM 20544] Length = 443 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 47/154 (30%), Gaps = 38/154 (24%) Query: 60 VYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 +Y + +++ ++ +A F Q D + + A Q G+++ A Sbjct: 297 LY-RGIVYFNRADYKQAESDFRQAVGLKSD------SMAAHYNLAITQQREGRHKDALKT 349 Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 + + S +Y G+ + DQ+ L + + K Sbjct: 350 YDALLKL---SPEFMQAWYNRGL--------IALDQKKESEALADFQEALRLTPQTADAK 398 Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 A+ + Y+++ +Y A Sbjct: 399 NAQ---------------AVA--YIRQKKYEKAW 415 >gi|114799947|ref|YP_761257.1| TPR domain-containing protein [Hyphomonas neptunium ATCC 15444] gi|114740121|gb|ABI78246.1| TPR domain protein [Hyphomonas neptunium ATCC 15444] Length = 522 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 9/67 (13%), Positives = 22/67 (32%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123 + ++ KA + ++ + P + + S + + G + A + E I Sbjct: 384 GRVLMRNGEPEKAIFHLSRFEQLSPSSPLRYFSTFQKSVALFMQGDLKGAETALESTIRL 443 Query: 124 YPESKNV 130 P Sbjct: 444 NPSYPFA 450 Score = 35.9 bits (82), Expect = 6.4, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 41/151 (27%), Gaps = 24/151 (15%) Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87 F + Q++R++ L + A ++A Y Sbjct: 314 FEVGGGLDQALAEQAAREIDLALTLGRDRPDVLARAATALSMIGRPAEALPYAEDAVAMN 373 Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY--------VYYLVGM 139 P G+ L V G+ ++A + P S + Y ++ G Sbjct: 374 PGGGIGH---LYLGRVLMRNGEPEKAIFHLSRFEQLSPSSP-LRYFSTFQKSVALFMQG- 428 Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 D + + L+ R+ Y Sbjct: 429 -----------DLKGAETALESTIRLNPSYP 448 >gi|222055719|ref|YP_002538081.1| hypothetical protein [Geobacter sp. FRC-32] gi|221565008|gb|ACM20980.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. FRC-32] Length = 420 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 9/84 (10%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-----SAGKYQQAASLGE 118 A+ L + KA E + +P+ + L A++ +Y +AA + Sbjct: 36 ALELLNAGEYEKALEQLQKAFSFYPYDE-TLRKNLAVAYMYMGKKELENNRYLEAAENFD 94 Query: 119 EYITQYPESKNVDYVYYLVGMSYA 142 P + Y + G+++ Sbjct: 95 HARELSPGNST--YGM-MRGIAFY 115 >gi|46095312|gb|AAS80154.1| protein serine/threonine phosphatase [Nicotiana benthamiana] Length = 232 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 25/87 (28%), Gaps = 14/87 (16%) Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158 AF +Y A + I P+ YY G +Y M K Sbjct: 21 NRAFAHTKLEEYGSAIQDAAKAIETDPKYSKG---YYRRGAAYLAM--------GKFKDA 69 Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVG 185 L+ R+ + N P A + Sbjct: 70 LKDFQRVKKLCPNDP---DATKKLKEC 93 >gi|326431070|gb|EGD76640.1| tetratricopeptide protein, variant [Salpingoeca sp. ATCC 50818] Length = 753 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 44/144 (30%), Gaps = 35/144 (24%) Query: 64 AVLFLKEQNFSKAYEYFNQ--------CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + + ++ KA ++ + P +S G+Y++A Sbjct: 473 GIANYSKGDYDKAIAFYEKALAITVVVLGEKHPSTATTYN---NLGEAYHSKGEYEKAIE 529 Query: 116 LGEEYITQ--------YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167 L E+ + +P++ + I + D+ + YM + ++ Sbjct: 530 LYEKALAITVETLGVKHPDTADT-----------CNNIGLLHNDRGDKEQACSYMQQALD 578 Query: 168 RY-----TNSPYVKGARFYVTVGR 186 + + P + A + R Sbjct: 579 VFATSLGPDHPNTRKAERNLRRIR 602 Score = 35.1 bits (80), Expect = 9.8, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 21/68 (30%), Gaps = 12/68 (17%) Query: 61 YEK-AVLFLKEQNFSKAYEYF--------NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111 Y + + ++ KA + + P S L YS G Y Sbjct: 427 YNNLGSAYDDKGDYDKAIALYAKALAIRVETLGQKHPSTA---NSYLGLGIANYSKGDYD 483 Query: 112 QAASLGEE 119 +A + E+ Sbjct: 484 KAIAFYEK 491 >gi|324326239|gb|ADY21499.1| TPR domain protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 891 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 36/256 (14%), Positives = 69/256 (26%), Gaps = 74/256 (28%) Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAF 102 + D D Y A + + +A + F Q + + ++ A Sbjct: 591 KLIKDREIDKENNEAAYLLASANFRIGKYQEAVQNFEQALANNAKGIEPYKKDAMRDLAV 650 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG-MSYAQMIRDVPYDQRATKLMLQY 161 ++++A + + T+ +++ V YL G +S A V D + Sbjct: 651 SHMKMKEFEKAEDVIVKMSTK--TNEDKAIVSYLKGQLSTA----TVQLD-----KAESF 699 Query: 162 MSRIVERYTNSPYV-------------------KGARFYVTV------------------ 184 + + +S A+ + Sbjct: 700 FKEAIMQ--DSKNAIYTIELSNLYVLWNKTNLIDSAKKEMNYQQASHILQVAIQKDMKNI 757 Query: 185 -GRNQLAAKEVEIGRYYLKRG------EYVAAIPRFQLVLAN--------------YSDA 223 NQL E G++Y R Y A+ + V+++ Y Sbjct: 758 ELLNQLGIVYYEAGQFYETRDGAKSTAAYQQALEAYNRVVSSGTRDINTLVNIGILYDKV 817 Query: 224 EHAEEAMARLVEAYVA 239 EA EAY Sbjct: 818 GQVNEAEKLFTEAYAQ 833 >gi|261403846|ref|YP_003248070.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus vulcanius M7] gi|261370839|gb|ACX73588.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus vulcanius M7] Length = 323 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 72/206 (34%), Gaps = 39/206 (18%) Query: 71 QNFSKAYEYFNQCSRDFP-FAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128 + + + +++ P F +K+ ++ GKY++A + P+ K Sbjct: 130 GEYDELLKTYDEILAYTPNFVPMWVKKAEILR-----KLGKYEEALLCLNRALELKPKDK 184 Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE----RYTNS-PYVKGARFYVT 183 N YL G+ +M R K ++ ++++ R+ ++ + + Sbjct: 185 N---ALYLKGVLLKRMGR--------FKEAIECFKKLIDELNVRWIDAIRHAVSLLLLIG 233 Query: 184 VGRNQ-------LAAKEVEIGRYYLKRGEYV------AAIPRFQLVLANYSDAEHAEEAM 230 ++ L +E ++ +Y K Y A+ + V+ H A+ Sbjct: 234 DLKDVERYINMGLKIREDDVALWYYKGELYQKLGKLGEALKCYDRVIELQP---HYIRAL 290 Query: 231 ARLVEAYVALALMDEAREVVSLIQER 256 + Y +++A E + E Sbjct: 291 LSKAKIYERQGDLEKAVEYYNKAVEN 316 >gi|251772295|gb|EES52865.1| Tetratricopeptide TPR_2 repeat protein [Leptospirillum ferrodiazotrophum] Length = 230 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 25/71 (35%), Gaps = 10/71 (14%) Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF---VQYSAGKYQQAASLGEEY 120 L + ++ +A+ Y ++ P L+ + V Y G+ + + Sbjct: 141 GKLDIDRGDYQEAHIYLHEAQERHPENP------LILTYLGIVHYRIGELADSRKNFQSA 194 Query: 121 ITQYPESKNVD 131 + +P S + Sbjct: 195 LALHP-SPALA 204 >gi|228923717|ref|ZP_04086995.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835846|gb|EEM81209.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 273 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 24/66 (36%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 +Q+ K LT S ++ L + + L E+ EKA L+++ Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60 Query: 76 AYEYFN 81 + F Sbjct: 61 EVKKFQ 66 >gi|229175682|ref|ZP_04303190.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus cereus MM3] gi|228607823|gb|EEK65137.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus cereus MM3] Length = 273 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 24/66 (36%) Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75 +Q+ K LT S ++ L + + L E+ EKA L+++ Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60 Query: 76 AYEYFN 81 + F Sbjct: 61 EVKKFQ 66 >gi|308198147|ref|XP_001386876.2| glucose repression mediator protein [Scheffersomyces stipitis CBS 6054] gi|149388888|gb|EAZ62853.2| glucose repression mediator protein [Pichia stipitis CBS 6054] Length = 815 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 38/141 (26%), Gaps = 28/141 (19%) Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGK 109 D Y + + +F+ AYE F Q P + Y + Sbjct: 335 DNSDAHSWYYLGRVHMIRGDFNAAYEAFQQAVNRDSRNP-TFWC-----SIGVLYYQISQ 388 Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIV 166 Y+ A I P + V+Y +G Y I D L + Sbjct: 389 YRDALDAYTRAIRLNP---YISEVWYDLGTLYETCNNQISD----------ALDAYRQAE 435 Query: 167 ERYTNSPYVKGARFYVTVGRN 187 +P++ + + Sbjct: 436 RLDPGNPHI---KARLDQLIK 453 >gi|88604167|ref|YP_504345.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] gi|88189629|gb|ABD42626.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] Length = 135 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 36/109 (33%), Gaps = 14/109 (12%) Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121 + ++ F +A F Q ++ A + + F + +GKYQ+A E+ Sbjct: 2 NRGRALIELTRFEEAISTFEQVIQNN--QNHAA-AWISKGFALFESGKYQEALEAFEQGG 58 Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 P+ + + D+ + + L + ++ Sbjct: 59 LINPDDPGI-----------WEQQGDILIELGRFEEALSAFEKAIQMRP 96 >gi|52081023|ref|YP_079814.1| integral membrane protein GluP [Bacillus licheniformis ATCC 14580] gi|52786400|ref|YP_092229.1| YqgP [Bacillus licheniformis ATCC 14580] gi|319645019|ref|ZP_07999252.1| YqgP protein [Bacillus sp. BT1B_CT2] gi|52004234|gb|AAU24176.1| TPR motif integral membrane protein GluP [Bacillus licheniformis ATCC 14580] gi|52348902|gb|AAU41536.1| YqgP [Bacillus licheniformis ATCC 14580] gi|317392828|gb|EFV73622.1| YqgP protein [Bacillus sp. BT1B_CT2] Length = 512 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 32/118 (27%), Gaps = 25/118 (21%) Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE------------- 70 + IF G ++ + Y+ YEK LKE Sbjct: 374 VLIFVIGGGALYFGTHSAPVQENAMLHQAAKWYEEGEYEKVKDALKEAGSKPDASSDTLR 433 Query: 71 ---------QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119 + A + F P + A SL A++ G+ +A E Sbjct: 434 LLAYSEIRLGEYENAEKRFEAVVEKDP-SDHA--SLYSLAWLYTQRGELAKAEQSIER 488 >gi|186681322|ref|YP_001864518.1| hypothetical protein Npun_R0837 [Nostoc punctiforme PCC 73102] gi|186463774|gb|ACC79575.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102] Length = 654 Score = 35.9 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 42/113 (37%), Gaps = 16/113 (14%) Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113 Y+R Y +A++++K + + A +FP + + + L +Y QA Sbjct: 497 YERAYYNRALVYIKLNDLNNARNNLEAAIREENFP-SAYSELARL-----YILEKEYPQA 550 Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 +L + + P VD V Y + + + + Q+ + + Sbjct: 551 IALLLKGLKLQP----VDRVKY----ALFKNLGWAQFGQKRYADAESTLREAI 595 >gi|322493662|emb|CBZ28952.1| conserved TPR domain protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 402 Score = 35.9 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 39/126 (30%), Gaps = 18/126 (14%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYS 106 ++ + ++ K + + + +A Y+ + P A ++ Sbjct: 123 NNPYEGLTAEQIKNKGNELMSQAKYKEAIAYYTKAIELQPDNAVFFANRAA-----AHTH 177 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y A E I PE Y SY+++ + Y Q + ++ Sbjct: 178 LKDYNNAIIDCERAIIINPE--------YSK--SYSRLGTALFY-QENYSRAVDAFTKAC 226 Query: 167 ERYTNS 172 E ++ Sbjct: 227 ELDPDN 232 >gi|317474833|ref|ZP_07934103.1| TPR repeat-containing protein [Bacteroides eggerthii 1_2_48FAA] gi|316908971|gb|EFV30655.1| TPR repeat-containing protein [Bacteroides eggerthii 1_2_48FAA] Length = 481 Score = 35.9 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 15/114 (13%), Positives = 32/114 (28%), Gaps = 20/114 (17%) Query: 71 QNFSKAY-EYFNQCSRDFPFAGVARKSLLM----SAFVQYSAGKYQQAASLGEEYITQYP 125 + + +A EY + S + A Y QA + ++Y Sbjct: 285 KKYDRAIVEYGKALEK--------DSSQIDVWREIADAYELKNDYAQAIAAYQKYYDTLS 336 Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPY------DQ-RATKLMLQYMSRIVERYTNS 172 + K + +G Y D+ A + + + + +S Sbjct: 337 QDKKTPEALFQLGRLYYGQGTSQDTLTVQPADRMTALQAADSVFALVARQAPDS 390 >gi|302658665|ref|XP_003021034.1| hypothetical protein TRV_04899 [Trichophyton verrucosum HKI 0517] gi|291184909|gb|EFE40416.1| hypothetical protein TRV_04899 [Trichophyton verrucosum HKI 0517] Length = 493 Score = 35.9 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 19/158 (12%), Positives = 48/158 (30%), Gaps = 31/158 (19%) Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLLMSAFVQYS 106 S +D+ + + +QN+ A + + Q + P + ++ + Sbjct: 2 SQSDIEAATALKLQGNKCFAQQNWPAALDLYTQAIELYDKEP-SFYCNRAQV-----HVK 55 Query: 107 AGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164 + A + + I P Y Y+ ++ ++ + L Sbjct: 56 LEAFGFAIADATKAIELDPS-----YVKAYWRRAVANTAILNS--------RAALNDFKT 102 Query: 165 IVERYTNSPYVKGARFYVTVG----RNQLAAKEVEIGR 198 +V++ N A+ + R K +E+ Sbjct: 103 VVKKAPNDR---DAKLKLAECEKLVRRIEFEKAIEVAD 137 >gi|254516175|ref|ZP_05128235.1| Methyltransferase domain family protein [gamma proteobacterium NOR5-3] gi|219675897|gb|EED32263.1| Methyltransferase domain family protein [gamma proteobacterium NOR5-3] Length = 517 Score = 35.9 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 25/211 (11%), Positives = 65/211 (30%), Gaps = 39/211 (18%) Query: 61 YEKAVLFLKE-----QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115 + +A+ L + + +A + + + A AG+ + A Sbjct: 126 FSEALNNLASAFTDLKQYKEALGCYQELVNR---GEADAEVYANLARALKGAGQTENALE 182 Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 + P + + ++ D ++ + V Sbjct: 183 ALRRALQLNPLYTDA-----------FNDLGNLLNDMGEHDEAIKAYRSALSLEPKHRKV 231 Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235 + + R+ A ++ AA+ ++ ++ H+E+A+ Sbjct: 232 L-----LNLARSLSAMY------------KHKAALIVYKELVTLEP---HSEDALRGTAN 271 Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYV 266 +AL+L EA + + + E P A+++ Sbjct: 272 TLLALSLDQEAGDYLQRLLELKPHDKTAKHL 302 >gi|186686398|ref|YP_001869594.1| hypothetical protein Npun_R6379 [Nostoc punctiforme PCC 73102] gi|186468850|gb|ACC84651.1| Tetratricopeptide TPR_2 repeat protein TprN [Nostoc punctiforme PCC 73102] Length = 291 Score = 35.9 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 8/63 (12%), Positives = 20/63 (31%), Gaps = 9/63 (14%) Query: 60 VYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116 ++ +++N+ A + + + P L Y GK A + Sbjct: 104 LFALGSANFQQKNYQAAVVNYQDGLKLKPNDPEG------LFDLGNAYYLLGKLPDAIAQ 157 Query: 117 GEE 119 ++ Sbjct: 158 YDK 160 >gi|154300656|ref|XP_001550743.1| hypothetical protein BC1G_10916 [Botryotinia fuckeliana B05.10] gi|150856523|gb|EDN31715.1| hypothetical protein BC1G_10916 [Botryotinia fuckeliana B05.10] Length = 651 Score = 35.9 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 5/58 (8%) Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114 ++ +AV LK + A + + +A + +L A+ Y GK AA Sbjct: 38 PNALHTRAVALLKLDRYDDALKALDDGGD-----KLASQCILERAYALYKTGKLADAA 90 >gi|146094018|ref|XP_001467120.1| TPR domain protein [Leishmania infantum JPCM5] gi|134071484|emb|CAM70173.1| conserved TPR domain protein [Leishmania infantum JPCM5] gi|322501216|emb|CBZ36295.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 408 Score = 35.9 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 39/126 (30%), Gaps = 18/126 (14%) Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYS 106 ++ + ++ K + + + +A Y+ + P A ++ Sbjct: 123 NNPYEGLTAEQIKNKGNELMSQAKYKEAIAYYTKAIELQPDNAVFFANRAA-----AHTH 177 Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166 Y A E I PE Y SY+++ + Y Q + ++ Sbjct: 178 LKDYNNAIIDCERAIIINPE--------YSK--SYSRLGTALFY-QENYSRAVDAFTKAC 226 Query: 167 ERYTNS 172 E ++ Sbjct: 227 ELDPDN 232 >gi|145522285|ref|XP_001446990.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124414483|emb|CAK79593.1| unnamed protein product [Paramecium tetraurelia] Length = 1362 Score = 35.9 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 50/162 (30%), Gaps = 40/162 (24%) Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165 K+++A + I + PE+ ++ YY ++ +M R + L+ Sbjct: 554 KMNKFEEALEYYDSAIQKNPENSDI---YYGKAITLDEMNR--------FEEALENYDSA 602 Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY----S 221 +++ + Y +Y + ++ + RF+ L NY Sbjct: 603 IQKNPENQY------------------------FYYGKATTLSKMNRFEEALENYDSAIQ 638 Query: 222 DAEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGYW 262 + + +EA + IQ+ + Sbjct: 639 KNPEKYDFYYGKAITLDEMNRFEEALQNYDQAIQKNPEDSRY 680 Score = 35.9 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 64/188 (34%), Gaps = 27/188 (14%) Query: 45 DVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAF 102 + Y ++ + Y KA K A E ++ ++ + + A+ Sbjct: 785 ENYDSAIKKNPENSDYYNGKAYTLQKLNRLETALENYDSAIQKNPENSDYYNR----KAY 840 Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162 Y+ + +A I Q P + Y Y+ ++ +M R V L+Y Sbjct: 841 TLYALNRLDEALENYNSSIQQNP--EESSY-YFNKAITLHKMNRLV--------ESLEYF 889 Query: 163 SRIVERYT-NSPYVKG---ARFYVTVGRNQLAAKEVEI------GRYYLKRGEYVAAIPR 212 +++ +S Y G + R L + I RYY + + + R Sbjct: 890 DEAIKKNPEDSEYYNGKAFTLRKMNRVREALQNFDSAIQKFPEDSRYYFNKAITLNTMNR 949 Query: 213 FQLVLANY 220 F+ L NY Sbjct: 950 FEEALENY 957 Score = 35.9 bits (82), Expect = 6.8, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 57/172 (33%), Gaps = 26/172 (15%) Query: 60 VYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118 Y KA F +A E ++ ++ + A + + ++A + Sbjct: 1161 YYNKATTLNNMNRFEEALENYDSAIQKNPEDSRY----YFNKAITLNTMNRLEKALENYD 1216 Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY---- 174 I +