HHsearch alignment for GI: 254781175 and conserved domain: PRK13186
>PRK13186 lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Reviewed.
Probab=100.00 E-value=0 Score=804.10 Aligned_cols=284 Identities=46% Similarity=0.751 Sum_probs=277.9
Q ss_pred CCCHHHCCEEEEEEEEECCCCEEEEEEEECCCCCCEEEEEEECCCCCCEEECCHHHHHHHHHHCCCCCCEEEEEEHHHHH
Q ss_conf 01711075199999970379778999983788871899980568888626310998666322013476315886489989
Q gi|254781175|r 8 RLQHTIADSITITGIGIHSGKRANLKLCPAPEGVGILFKCTQSGGITDSLSALWSNVLRTTLSTTIGSSSCQVRTIEHLM 87 (296)
Q Consensus 8 ~~Q~Ti~~~v~~~GiGLHsG~~~~i~l~PA~~~~GI~F~R~dl~~~~~~I~A~~~~V~~t~~~T~L~~~~~~V~TVEHLL 87 (296)
T Consensus 2 ~~Q~Ti~~~v~~~GiGLHsG~~~~v~l~PA~~~tGI~F~R~Dl~~-~~~I~A~~~~V~~t~~~T~L~~~g~~V~TVEHLL 80 (299)
T PRK13186 2 IKQRTLKKIVSATGVGLHSGKKVTLTLRPAPANTGIVFRRTDLDP-PVEIPARADNVGDTRLCTTLGNGGVRVSTVEHLM 80 (299)
T ss_pred CCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCEEEEECCCCC-CCEEEEEHHHCCCCCCCCEEECCCEEEEEHHHHH
T ss_conf 986357872799989925797888999948999758999914899-8279987410567776378805984997499999
Q ss_pred HHHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEECCEEEEEECCCCCEEEEEEEE
Q ss_conf 99987200059999648878300582899999885445544478751477046349981771465414766337899970
Q gi|254781175|r 88 AALYAYGIDNVIIEIDSTEVPIMDGSAKAFVEVIERIGIKTLTAKRRYLRIIKSVRITSGESWAEFSPHCSMRFEISIEF 167 (296)
Q Consensus 88 AAL~glgIDN~~Ieidg~EiPIlDGSA~~fv~~i~~aGi~eq~~~r~~~~i~~~v~v~~~~~~i~~~P~~~l~i~~~idf 167 (296)
T Consensus 81 AAL~glgIDN~~Ieidg~EvPIlDGSA~~fv~~i~~aGi~~q~~~r~~~~I~~~i~v~~~~~~i~~~P~~~l~i~~~idf 160 (299)
T PRK13186 81 AALAGLGIDNAIIEVDGPEVPIMDGSAAPFVFLIQSAGIVEQNAPKKFIRIKKPVRVEDGDKFAELLPYDGFRLDFTIDF 160 (299)
T ss_pred HHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCEEEECCEEEEEECCEEEEEECCCCEEEEEEEEC
T ss_conf 99985787418999688627601586699999987448450467420489577099996999999937997799999987
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCCCEEEECCCCEECCCCCCCCCCCCCHHHHH
Q ss_conf 88431300023455457789851465032220257888642000321334645641377331067747899720011489
Q gi|254781175|r 168 KNSIIGFQKWAGDLTQTVFRNEIYAARTFGFLRDVERYRKAGCALGASLENSVVISEDDQVMNHGGLRYSGEEFVRHKTL 247 (296)
Q Consensus 168 ~~~~Ig~Q~~~~~~~~~~f~~eIa~ARTF~~~~eie~L~~~Gl~~Ggsl~NaiVi~~~~~i~n~~~LR~~~dE~vRHKiL 247 (296)
T Consensus 161 ~~~~Ig~Q~~~~~~~~~~f~~eIa~ARTF~f~~eve~l~~~Gl~kGgsl~NaiVi~-~~~vlN~~gLR~~-dE~vRHKiL 238 (299)
T PRK13186 161 DHPAIGRQRYSLDFSPESFVREIARARTFGFMKDVEYLRAAGLALGGSLDNAIVLD-DDRVLNPDGLRFE-DEFVRHKIL 238 (299)
T ss_pred CCCCCCCEEEEECCCHHHHHHHCCCCCEEECHHHHHHHHHCCCCCCCCCHHEEEEC-CCCEECCCCCCCC-CCCCCCCCH
T ss_conf 99768338867205817788750257346727869999878963444501158853-8807479887688-814153303
Q ss_pred HHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 99898997599646899997788089999999998096671566207
Q gi|254781175|r 248 DAIGDIALAGYPVIGCYRSCRGSHEINHMALCTLFADKDSYEIVDDH 294 (296)
Q Consensus 248 DlIGDL~L~G~pi~g~i~a~k~GH~ln~~l~~~l~~~~~~~~~v~~~ 294 (296)
T Consensus 239 DliGDL~L~G~pi~g~i~a~~~GH~ln~~l~~~l~~~~~~~~~~~~~ 285 (299)
T PRK13186 239 DAIGDLYLLGHPIIGHFTAYKSGHALNNKLLRALLADQDAWEIVTFE 285 (299)
T ss_pred HHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 54445776489617999998687199999999997398855999935