HHsearch alignment for GI: 254781176 and conserved domain: cd05006
>cd05006 SIS_GmhA Phosphoheptose isomerase is a member of the SIS (Sugar ISomerase) superfamily. Phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate into D-glycero-D-mannoheptose 7-phosphate. This is the first step of the biosynthesis of gram-negative bacteria inner core lipopolysaccharide precursor, L-glycero-D-mannoheptose (Gmh).
Probab=95.54 E-value=0.23 Score=29.37 Aligned_cols=118 Identities=18% Similarity=0.275 Sum_probs=75.2
Q ss_pred CCEEEEEEECCCHHHHH---HHHHHC---CCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 86179999668147999---999985---899844999825578855189970485155425567888883899999997
Q gi|254781176|r 14 KPRITVFGVGGGGGNAV---NNMVSS---GLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEE 87 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~---~~~~~~---~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~ 87 (502)
T Consensus 33 g~kI~~~GNGgSa~~A~H~a~dl~~~~~~~r~~l~aisL~~~~~~~ta~~ND~~~----------------------~~i 90 (177)
T cd05006 33 GGKILICGNGGSAADAQHFAAELVKRFEKERPGLPAIALTTDTSILTAIANDYGY----------------------EEV 90 (177)
T ss_pred CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCCH----------------------HHH
T ss_conf 9989999687408889999998735766688870179767877888887565329----------------------999
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 29999997269989999803676667407899999998649849999504300040678888999999999863335450
Q gi|254781176|r 88 CIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVI 167 (502)
Q Consensus 88 ~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i 167 (502)
T Consensus 91 f~~ql~~~~~~gDili~iS~sG~---s~nii~a~~~ak~~g~~~i~ltg~----~gg~-----------l~~~~D~~i~v 152 (177)
T cd05006 91 FSRQVEALGQPGDVLIGISTSGN---SPNVLKALEAAKERGMKTIALTGR----DGGK-----------LLELADIEIHV 152 (177)
T ss_pred HHHHHHHHCCCCCEEEEECCCCC---CHHHHHHHHHHHHCCCEEEEEECC----CCCH-----------HHHHCCEEEEE
T ss_conf 99999974468988999818999---989999999999879989999878----9861-----------67619989996
Q ss_pred HHHH
Q ss_conf 2788
Q gi|254781176|r 168 PNQN 171 (502)
Q Consensus 168 ~n~~ 171 (502)
T Consensus 153 ps~~ 156 (177)
T cd05006 153 PSDD 156 (177)
T ss_pred CCCC
T ss_conf 9998