HHsearch alignment for GI: 254781176 and conserved domain: cd05293
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.21 E-value=0.056 Score=33.95 Aligned_cols=106 Identities=22% Similarity=0.306 Sum_probs=65.7
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCC-CEEEEECCC---HHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 861799996681479999999858998-449998255---7885518997048515542556788888389999999729
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQG-VNFVVANTD---AQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECI 89 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~-~~~~~~ntd---~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~ 89 (502)
T Consensus 3 r~Kv~IIGaG~VG~~~A~~l~~~~l~~el~L~Di~~~~a~g~a~Dl~h~~~~--~~~--~~v~-~~~d~----------- 66 (312)
T cd05293 3 RNKVTVVGVGQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAF--LKN--PKIE-ADKDY----------- 66 (312)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCC--CCC--CEEE-ECCCH-----------
T ss_conf 8869998978889999999996699887999938898332688886604012--798--5599-37999-----------
Q ss_pred HHHHHHHCCCCEEEEEECCCCCCCC-------CHHHHHHHHHHHC-----CCEEEEEEECCCC
Q ss_conf 9999972699899998036766674-------0789999999864-----9849999504300
Q gi|254781176|r 90 DEITEMLDKTHMCFVTAGMGGGTGT-------GAAPIIAKIARNK-----GVLTVGVVTKPFH 140 (502)
Q Consensus 90 ~~i~~~~~~~~~~~~~ag~gggtgt-------g~~p~ia~~a~~~-----~~~~~~~v~~pf~ 140 (502)
T Consensus 67 ----~~~~~aDvVVitAG~~~k~g~~R~dLl~~N~~I~~~i~~~i~~~~p~~-ivivvsNPvD 124 (312)
T cd05293 67 ----SVTANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNA-ILLVVSNPVD 124 (312)
T ss_pred ----HHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-EEEECCCCHH
T ss_conf ----996899999988999999898889999988999999999988419984-6996689189