HHsearch alignment for GI: 254781176 and conserved domain: cd05294

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=95.05  E-value=0.19  Score=30.08  Aligned_cols=100  Identities=19%  Similarity=0.272  Sum_probs=61.5

Q ss_pred             CEEEEEEE-CCCHHHHHHHHHHCCCCCCEEEEE--CCC-----HHHHHHCCC------CEEEEECCCCCCCCCCCCCHHH
Q ss_conf             61799996-681479999999858998449998--255-----788551899------7048515542556788888389
Q gi|254781176|r   15 PRITVFGV-GGGGGNAVNNMVSSGLQGVNFVVA--NTD-----AQALMMSKA------KQIIQLGSGITEGLGAGSHPEV   80 (502)
Q Consensus        15 ~~i~v~g~-gg~g~n~~~~~~~~~~~~~~~~~~--ntd-----~~~l~~~~~------~~~~~~g~~~~~g~g~g~~~~~   80 (502)
T Consensus         1 mKV~IiGAaG~VG~~~a~~l~~~~~~-~el~LiD~~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~----------~~d---   66 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVV-KEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKI----------SSD---   66 (309)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCC-CEEEEEECCCCCCCCCEEEHHHHCCCCCCCCCCEEEE----------CCC---
T ss_conf             98999999976999999999837998-7599960556434231123554503433688767982----------798---


Q ss_pred             HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-------CHHHHHHHHHHHCCC----EEEEEEECCCC
Q ss_conf             9999997299999972699899998036766674-------078999999986498----49999504300
Q gi|254781176|r   81 GRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGT-------GAAPIIAKIARNKGV----LTVGVVTKPFH  140 (502)
Q Consensus        81 g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgt-------g~~p~ia~~a~~~~~----~~~~~v~~pf~  140 (502)
T Consensus        67 ------------~~~~~daDivVitAG~~rk~g~tR~dLl~~Na~I~~~i~~~i~~~~p~~ivivvtNPvD  125 (309)
T cd05294          67 ------------LSDVAGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNPVD  125 (309)
T ss_pred             ------------HHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHH
T ss_conf             ------------89968999999878988995998789999899999999987642699849997689657