HHsearch results for GI: 254781176 and protein with PDBid: 3d0o_A
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=94.93 E-value=0.21 Score=28.10 Aligned_cols=99 Identities=14% Similarity=0.244 Sum_probs=64.4
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCH-----HHHHHCC------CCEEEEECCCCCCCCCCCCCHHHHH
Q ss_conf 8617999966814799999998589984499982557-----8855189------9704851554255678888838999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDA-----QALMMSK------AKQIIQLGSGITEGLGAGSHPEVGR 82 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~-----~~l~~~~------~~~~~~~g~~~~~g~g~g~~~~~g~ 82 (502)
++||.|||.|.-|......+...++- -+++.++.+. ++|+.+. ...++.- ++.
T Consensus 6 ~~KV~IiGaG~VG~~~a~~l~~~~l~-~el~L~Di~~~~a~g~a~DL~~~~~~~~~~~~i~~-----------~~~---- 69 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIV-DELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-----------GEY---- 69 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSC-SEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-----------CCG----
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCC-CEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEC-----------CCH----
T ss_conf 98099989788999999999707998-86999917897543488988612514799769936-----------978----
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-------CHHHHHHHHHHHC-----CCEEEEEEECCCC
Q ss_conf 99997299999972699899998036766674-------0789999999864-----9849999504300
Q gi|254781176|r 83 AAAEECIDEITEMLDKTHMCFVTAGMGGGTGT-------GAAPIIAKIARNK-----GVLTVGVVTKPFH 140 (502)
Q Consensus 83 ~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgt-------g~~p~ia~~a~~~-----~~~~~~~v~~pf~ 140 (502)
+.+.++|+|+||||..-..|. .-++++.++++.. ..+ +.|||-|-+
T Consensus 70 -----------~~~~daDvvvitaG~~rk~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i-vivvsNPvd 127 (317)
T 3d0o_A 70 -----------SDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGI-FLVATNPVD 127 (317)
T ss_dssp -----------GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSE-EEECSSSHH
T ss_pred -----------HHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE-EEEECCCCH
T ss_conf -----------9957998999836888998988467777679999999988642489728-999358841