BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= gi|254781176|ref|YP_003065589.1| cell division protein FtsZ [Candidatus Liberibacter asiaticus str. psy62] (502 letters) Database: las_proteome 1233 sequences; 328,796 total letters Searching...................................................done >gi|254781176|ref|YP_003065589.1| cell division protein FtsZ [Candidatus Liberibacter asiaticus str. psy62] Length = 502 Score = 1024 bits (2647), Expect = 0.0, Method: Compositional matrix adjust. Identities = 502/502 (100%), Positives = 502/502 (100%) Query: 1 MVGKNANMDITELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQ 60 MVGKNANMDITELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQ Sbjct: 1 MVGKNANMDITELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQ 60 Query: 61 IIQLGSGITEGLGAGSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPII 120 IIQLGSGITEGLGAGSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPII Sbjct: 61 IIQLGSGITEGLGAGSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPII 120 Query: 121 AKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPNQNLFRIANDKT 180 AKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPNQNLFRIANDKT Sbjct: 121 AKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPNQNLFRIANDKT 180 Query: 181 TFADAFSMADQVLYSGVSCITDLMIKEGLINLDFADVRSVMRNMGRAMMGTGEASGHGRG 240 TFADAFSMADQVLYSGVSCITDLMIKEGLINLDFADVRSVMRNMGRAMMGTGEASGHGRG Sbjct: 181 TFADAFSMADQVLYSGVSCITDLMIKEGLINLDFADVRSVMRNMGRAMMGTGEASGHGRG 240 Query: 241 IQAAEAAVANPLLDEASMKGSQGLLISITGGSDLTLFEVDEAATRIREEVDSEANIILGA 300 IQAAEAAVANPLLDEASMKGSQGLLISITGGSDLTLFEVDEAATRIREEVDSEANIILGA Sbjct: 241 IQAAEAAVANPLLDEASMKGSQGLLISITGGSDLTLFEVDEAATRIREEVDSEANIILGA 300 Query: 301 TFDEALEGVIRVSVVATGIENRLHRDGDDNRDSSLTTHESLKNAKFLNLSSPKLPVEDSH 360 TFDEALEGVIRVSVVATGIENRLHRDGDDNRDSSLTTHESLKNAKFLNLSSPKLPVEDSH Sbjct: 301 TFDEALEGVIRVSVVATGIENRLHRDGDDNRDSSLTTHESLKNAKFLNLSSPKLPVEDSH 360 Query: 361 VMHHSVIAENAHCTDNQEDLNNQENSLVGDQNQELFLEEDVVPESSAPHRLISRQRHSDS 420 VMHHSVIAENAHCTDNQEDLNNQENSLVGDQNQELFLEEDVVPESSAPHRLISRQRHSDS Sbjct: 361 VMHHSVIAENAHCTDNQEDLNNQENSLVGDQNQELFLEEDVVPESSAPHRLISRQRHSDS 420 Query: 421 VEERGVMALIKRIAHSFGLHENIASEEDSVHMKSESTVSYLRERNPSISEESIDDFCVQS 480 VEERGVMALIKRIAHSFGLHENIASEEDSVHMKSESTVSYLRERNPSISEESIDDFCVQS Sbjct: 421 VEERGVMALIKRIAHSFGLHENIASEEDSVHMKSESTVSYLRERNPSISEESIDDFCVQS 480 Query: 481 KPTVKCEEDKLEIPAFLRRQSH 502 KPTVKCEEDKLEIPAFLRRQSH Sbjct: 481 KPTVKCEEDKLEIPAFLRRQSH 502 >gi|254780918|ref|YP_003065331.1| glycosyl transferase family protein [Candidatus Liberibacter asiaticus str. psy62] Length = 623 Score = 25.0 bits (53), Expect = 2.6, Method: Compositional matrix adjust. Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 10/56 (17%) Query: 30 VNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAA 85 +NN + +G F N D + + G ++E +G S P+VG A Sbjct: 398 INNNATLHAKGQYFCFLNNDTEVIN----------GQWLSEMMGIASQPQVGAVGA 443 Database: las_proteome Posted date: Jun 5, 2011 6:30 PM Number of letters in database: 328,796 Number of sequences in database: 1233 Lambda K H 0.314 0.131 0.361 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 301,961 Number of Sequences: 1233 Number of extensions: 12593 Number of successful extensions: 38 Number of sequences better than 100.0: 7 Number of HSP's better than 100.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 36 Number of HSP's gapped (non-prelim): 7 length of query: 502 length of database: 328,796 effective HSP length: 78 effective length of query: 424 effective length of database: 232,622 effective search space: 98631728 effective search space used: 98631728 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 40 (20.0 bits)