HHsearch alignment for GI: 254781177 and conserved domain: COG1548
>COG1548 Predicted transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].
Probab=96.50 E-value=0.025 Score=33.18 Aligned_cols=145 Identities=21% Similarity=0.196 Sum_probs=76.0
Q ss_pred CCCCCCEEEEEECCCCEEEEEEEC---------------CCCEEEEEECCCH--------------------HHHHHHHH
Q ss_conf 345550799995377155788403---------------5302453102422--------------------77508888
Q gi|254781177|r 225 DEFELGSVVIDMGGGTTKIAIFDK---------------GKLVYMDVIAIGG--------------------SHVTNDLA 269 (440)
Q Consensus 225 ~ek~~Gv~iIDiGa~tT~i~i~~~---------------g~l~~~~~i~iGG--------------------~~iT~DIa 269 (440)
T Consensus 126 e~~~dsci~VD~GSTTtDIIPi~~ge~~ag~tDlERL~~gELvY~GtLRTpvs~ll~kve~~g~~~~~ssE~FAitAD~~ 205 (330)
T COG1548 126 EEIKDSCILVDMGSTTTDIIPIKDGEAAAGKTDLERLKNGELVYVGTLRTPVSFLLNKVEFEGKLTPLSSEYFAITADAS 205 (330)
T ss_pred HHCCCCEEEEECCCCCCCEEEECCHHHHHCCCHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 86478569996478633247613246653233388874486599863156499986440137874556589988888899
Q ss_pred HHCC----------------CCHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCEEECCHHHHHHH----HHHHH
Q ss_conf 6334----------------523678887642574033555300001223357887653043389999999----99999
Q gi|254781177|r 270 RGLS----------------ISLDNAERLKVMHPSIIPSLADEHDILSIPTIGNADHNDLVQVSRAMISRI----IQARI 329 (440)
Q Consensus 270 ~~l~----------------i~~~eAE~lK~~~G~a~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~l~~I----I~~Rv 329 (440)
T Consensus 206 lilg~I~eedYTc~TpDGaGks~eecmrRlaR~vCaDlee----------------------lg~~~v~d~A~~~~~~~l 263 (330)
T COG1548 206 LILGKITEEDYTCDTPDGAGKSREECMRRLARTVCADLEE----------------------LGEEEVIDLAEKAYNALL 263 (330)
T ss_pred HHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHH----------------------CCHHHHHHHHHHHHHHHH
T ss_conf 9965787521578898888989999999999998389978----------------------190679999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCHHHHCCCHHHHHH
Q ss_conf 999998888764068644577439997323444578999999838975997143347821222372379999
Q gi|254781177|r 330 EETFELIGERIKKSGFSSLASKRIVLTGGASQVIGLQEMLRETICSNVRMGRPIGAVGLPFSARSPAFSTVI 401 (440)
Q Consensus 330 ~ei~~~i~~~l~~~~~~~~~~~~IvLtGGgs~l~gl~~~~~~~~~~~vri~~P~~~~g~~~~~~~p~~sta~ 401 (440)
T Consensus 264 ~~l~e~I~~~a~r~gL~~-----Vv~~GlG---efLi~~A~~~lg~ec~~i~e--~~g~~~s~v~PA~a~a~ 325 (330)
T COG1548 264 ELLAENIEEKAKRYGLNT-----VVATGLG---EFLIQEACKRLGYECISIDE--TYGKEVSKVAPAVAAAK 325 (330)
T ss_pred HHHHHHHHHHHHHCCHHH-----HHHCCCH---HHHHHHHHHHHCCEEEEHHH--HHCCCHHHHCHHHHHHH
T ss_conf 999999999998708255-----4123636---99999999861876897335--31542155444889999