HHsearch alignment for GI: 254781177 and conserved domain: pfam01869
>pfam01869 BcrAD_BadFG BadF/BadG/BcrA/BcrD ATPase family. This family includes the BadF and BadG proteins, which are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis. The family also includes an activase subunit from the enzyme 2-hydroxyglutaryl-CoA dehydratase. A member from Aquifex aeolicus contains two copies of this region suggesting that the family may structurally dimerize. This family appears to be related to pfam00370.
Probab=97.78 E-value=0.0028 Score=38.77 Aligned_cols=71 Identities=25% Similarity=0.390 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHH-----CCCEEEECCCCCCCCHHHHCCCH
Q ss_conf 9999999999999888876406864457743999732344457899999983-----89759971433478212223723
Q gi|254781177|r 322 SRIIQARIEETFELIGERIKKSGFSSLASKRIVLTGGASQVIGLQEMLRETI-----CSNVRMGRPIGAVGLPFSARSPA 396 (440)
Q Consensus 322 ~~II~~Rv~ei~~~i~~~l~~~~~~~~~~~~IvLtGGgs~l~gl~~~~~~~~-----~~~vri~~P~~~~g~~~~~~~p~ 396 (440)
T Consensus 213 ~~Il~~~~~~la~~~~~~~~~l~~~---~~~vvl~GGv~~~~~~~~~~~~~l~~~~~~~~v~--~~----------~~~~ 277 (288)
T pfam01869 213 EDILAGAAESIALRVAALIKRLGPV---PDQVVLTGGVAKNEVLVKALRDELSEKILEVKVN--VP----------PDPQ 277 (288)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCC---CCCEEEECCHHCCHHHHHHHHHHHHHHCCCCCEE--CC----------CCCC
T ss_conf 9999999999999999999843889---9979998941315999999999999755799476--28----------9866
Q ss_pred HHHHHHHHHHH
Q ss_conf 79999999977
Q gi|254781177|r 397 FSTVIGLMIYP 407 (440)
Q Consensus 397 ~sta~Gl~~~~ 407 (440)
T Consensus 278 ~~~A~GAal~A 288 (288)
T pfam01869 278 YAGAIGAALLA 288 (288)
T ss_pred HHHHHHHHHCC
T ss_conf 36599999739