HHsearch alignment for GI: 254781178 and conserved domain: COG4775
>COG4775 Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane].
Probab=98.18 E-value=5.4e-05 Score=51.69 Aligned_cols=84 Identities=14% Similarity=0.137 Sum_probs=78.3
Q ss_pred HHHHCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEEEEEEEEE
Q ss_conf 74210812548999776548988999980888898438875999999987197622799998289819999993037999
Q gi|254781178|r 82 VDSFIGFSIEKVRIIGNVETPEADIIHCLDLNTSTSLIFFDAIKIQKQLLALPWIAHAEIRRLYPDTMEIRLTERHPYAI 161 (304)
Q Consensus 82 ~~~~~gF~I~~I~V~Gn~~ls~~eIl~~l~i~~~~sl~~ld~~~i~~~L~~~pwIk~a~V~r~~P~tL~I~I~Er~PvA~ 161 (304)
T Consensus 18 ~~~a~~~vv~~I~v~G~~~~~~~~~~~~l~~~~G~~~s~~~i~~~ik~L~~tg~F~~v~~~~~~-~~Lvv~V~e~p~I~~ 96 (766)
T COG4775 18 AVAAEAFVVKDIRVEGLQRVSSGTALSYLPVRVGDTVSDEDIDEAIKALYATGYFEDVRVEREG-GTLVVTVKERPVINS 96 (766)
T ss_pred HHHCCCEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECC-CEEEEEEECCCCEEE
T ss_conf 1103362787899965542451236641573557513677889999999716897613788709-879999962772878
Q ss_pred EEECC
Q ss_conf 99579
Q gi|254781178|r 162 WQNNS 166 (304)
Q Consensus 162 ~~~~g 166 (304)
T Consensus 97 v~~~G 101 (766)
T COG4775 97 VVFSG 101 (766)
T ss_pred EEEEC
T ss_conf 99868