HHsearch alignment for GI: 254781179 and conserved domain: COG0439
>COG0439 AccC Biotin carboxylase [Lipid metabolism].
Probab=99.97 E-value=3.3e-30 Score=213.74 Aligned_cols=265 Identities=16% Similarity=0.285 Sum_probs=198.9
Q ss_pred HHHHHHHHHHHCCCEEEEECCCCCHHH--------------------H---------HHHCCCCEEEECCCCCCCCCCHH
Q ss_conf 999999999987988999615865688--------------------8---------87539989999254884343102
Q gi|254781179|r 18 SGKACASALEDAGFKVSQIDVDRSVGL--------------------V---------LAHLKPDLAFNVLHGNFGEDGLV 68 (300)
Q Consensus 18 S~~~i~~aL~~~g~~v~~id~~~~~~~--------------------~---------l~~~~~D~vf~~lhG~~gEdg~i 68 (300)
T Consensus 13 ia~ri~ra~~~lGi~tvav~s~~d~~~~~~~~adeav~i~~~~~~~syl~i~~ii~~a~~~gadai~pGy-gflsen~~f 91 (449)
T COG0439 13 IAVRIIRACRELGIETVAVYSEADADALHVALADEAVCIGPAPSADSYLNIDAIIAAAEETGADAIHPGY-GFLSENAAF 91 (449)
T ss_pred HHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEECCCC-HHHHCCHHH
T ss_conf 6899999999849858999661002252566375679838865034565188899899860876672350-342178899
Q ss_pred HHHHHHHHHHCCCCCHHHHHHCCCCHHCCCCCCCCEEECCCEEE---ECC-CCCHHHHHCCCCEEEEECCCCCCCCEEEE
Q ss_conf 35666432100231002332036500100002121000012132---022-20001221058625643247764211432
Q gi|254781179|r 69 QAILELLEIPYTHSGILASALSMDKMRSKQVVSSCGVPVCPSIL---VNR-FTMDSQHLISPPYVIKPLKGGSSLGIIVI 144 (300)
Q Consensus 69 q~~le~~~ipy~Gs~~~~~~l~~dK~~~k~~l~~~gIptp~~~~---~~~-~~~~~~~~~~~P~ivKP~~ggsS~Gv~~v 144 (300)
T Consensus 92 ae~~~~~gl~fiGP~~~~i~~mgdK~~ar~~~~~aGVP~vpgs~~~~~~~ee~~~~a~~iGyPVivKa~~GgGg~G~r~v 171 (449)
T COG0439 92 AEACAEAGLTFIGPSAEAIRRMGDKITARRLMAKAGVPVVPGSDGAVADNEEALAIAEEIGYPVIVKAAAGGGGRGMRVV 171 (449)
T ss_pred HHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEE
T ss_conf 99999749751084989999744589999999974999589978776888999999987199789997788996547997
Q ss_pred CCHHHHHHHHHHHCCCCC----CCCCCCCCCCCC-CEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 598999998863003668----854223335788-45788731444420022025543333110000112222458652-
Q gi|254781179|r 145 KKDQSIPLDLLQSSSWNH----GDQLLIEQYVDG-IELTCGVMGDASLDVTEIAVPKSDFYSYELKYSSLNSTHVLPAK- 218 (300)
Q Consensus 145 ~~~~el~~~~~~~~~~~~----~~~vlVEefI~G-~E~~v~Vl~~~~~~~~ei~~~~~~~~dy~~Ky~~~~~~~~~Pa~- 218 (300)
T Consensus 172 ~~~~el~~a~~~~~~ea~~~fg~~~v~iEk~i~~~rhievqv~gD~~g~~i~l~eRdcsi---qrr--~qkvieeapsp~ 246 (449)
T COG0439 172 RNEEELEAAFEAARGEAEAAFGNPRVYLEKFIEGPRHIEVQVLGDGHGNVIHLGERDCSI---QRR--HQKVIEEAPSPL 246 (449)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEEECCCCC---CCC--CCCEEEECCCCC
T ss_conf 999999999999998888755897278634105884689999876866589998646687---677--661553058888
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCC-CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 116665544444445775348764579999997689839999747265-8882238999999839998999999999751
Q gi|254781179|r 219 IPLDIYKEVQRLAFLAHQAIGCRGISRSDFLFDPLSRKVFWLEINVQP-GMTPVSIFPEMAAYAGYSFRELLLWMVEDAS 297 (300)
Q Consensus 219 l~~~~~~~i~~~a~~~~~alg~~g~~rvDf~~d~~~g~~~~lEvN~~P-Glt~~s~~p~~~~~~G~s~~~li~~ii~~A~ 297 (300)
T Consensus 247 ~~~e~r~~i~~~a~~a~~~~gY~gagtvEfl~~~-~~~~yfiEmN~Rlqveh~-----vte~vtGi---Dlv~~qi~ia~ 317 (449)
T COG0439 247 LTEELREKIGEAAVRAAKLIGYRGAGTVEFLYDS-NGEFYFIEMNTRLQVEHP-----VTEMVTGI---DLVKEQIRIAA 317 (449)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC-CCCEEEEEEECCCCCCCC-----CEEEEHHH---HHHHHHHHHHC
T ss_conf 9999999999999999986387777569999827-998799998641136763-----01000004---28999999976