HHsearch alignment for GI: 254781179 and conserved domain: PRK10446

>PRK10446 ribosomal protein S6 modification protein; Provisional.
Probab=99.96  E-value=3.2e-27  Score=194.64  Aligned_cols=269  Identities=18%  Similarity=0.243  Sum_probs=192.5

Q ss_pred             CEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH-----------HHCCCCEEEECCCCCCCC-CCHH
Q ss_conf             2898367871278899999999999998798899961586568888-----------753998999925488434-3102
Q gi|254781179|r    1 MAVLMGGISSEREVSLSSGKACASALEDAGFKVSQIDVDRSVGLVL-----------AHLKPDLAFNVLHGNFGE-DGLV   68 (300)
Q Consensus         1 i~vl~GG~s~E~~iSl~S~~~i~~aL~~~g~~v~~id~~~~~~~~l-----------~~~~~D~vf~~lhG~~gE-dg~i   68 (300)
T Consensus         3 i~iLs~~~------~~yst~RL~eaa~~rGh~v~vidp~~~~~~i~~~~~~v~~~g~~L~~~DavipR~g~~~t~~~~~v   76 (300)
T PRK10446          3 IAILSRDG------TLYSCKRLREAAIQRGHLVEILDPLSCYMNINPAASSIHYKGRKLPHFDAVIPRIGTAITFYGTAA   76 (300)
T ss_pred             EEEEECCC------CCCHHHHHHHHHHHCCCEEEEEEHHHCEEEECCCCCEEEECCEECCCCCEEEECCCCCCCHHHHHH
T ss_conf             99993699------760799999999987995999614891898248986499898086878889982677745589999


Q ss_pred             HHHHHHHHHHCCCCCHHHHHHCCCCHHCCCCCCCCEEECCCEEEECCCCCH--HHHHC-CCCEEEEECCCCCCCCEEEEC
Q ss_conf             356664321002310023320365001000021210000121320222000--12210-586256432477642114325
Q gi|254781179|r   69 QAILELLEIPYTHSGILASALSMDKMRSKQVVSSCGVPVCPSILVNRFTMD--SQHLI-SPPYVIKPLKGGSSLGIIVIK  145 (300)
Q Consensus        69 q~~le~~~ipy~Gs~~~~~~l~~dK~~~k~~l~~~gIptp~~~~~~~~~~~--~~~~~-~~P~ivKP~~ggsS~Gv~~v~  145 (300)
T Consensus        77 Lr~lE~~Gv~vi-N~~~aI~~~~DKl~t~qlL~~~gip~P~T~~~~~~~~~~~~i~~~gg~PvViKpl~Gs~G~GV~l~e  155 (300)
T PRK10446         77 LRQFEMLGSYPL-NESVAIARARDKLRSMQLLARQGIDLPVTGIAHSPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAE  155 (300)
T ss_pred             HHHHHHCCCCEE-CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEE
T ss_conf             999998899186-4899999857699999999875979998898369999999999808997899967898860369973


Q ss_pred             CHHHHHHHHHHHCCCCCCCCCCCCCCC---CCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             989999988630036688542233357---88457887314444200220255433331100001122224586521166
Q gi|254781179|r  146 KDQSIPLDLLQSSSWNHGDQLLIEQYV---DGIELTCGVMGDASLDVTEIAVPKSDFYSYELKYSSLNSTHVLPAKIPLD  222 (300)
Q Consensus       146 ~~~el~~~~~~~~~~~~~~~vlVEefI---~G~E~~v~Vl~~~~~~~~ei~~~~~~~~dy~~Ky~~~~~~~~~Pa~l~~~  222 (300)
T Consensus       156 ~~~~~~~i~~~~~--~~~~~~~iQeyI~~~~g~D~Rv~vvgg~vvaam~R~~~~g~~---rtN~~~Gg~~~--~~~l~--  226 (300)
T PRK10446        156 TRQAAESVIDAFR--GLNAHILVQEYIKEAQGCDIRCLVVGDEVVAAIERRAKEGDF---RSNLHRGGAAS--VASIT--  226 (300)
T ss_pred             CHHHHHHHHHHHH--HCCCCEEEEEECCCCCCCCEEEEEECCEEHHHEEEECCCCCE---EEEEECCCEEE--ECCCC--
T ss_conf             7899999999886--228737752202555798679999998624438997378834---77770397765--32899--


Q ss_pred             HHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHH-HHHHHHH
Q ss_conf             6554444444577534876457999999768983999974726588822389999998399989999-9999975
Q gi|254781179|r  223 IYKEVQRLAFLAHQAIGCRGISRSDFLFDPLSRKVFWLEINVQPGMTPVSIFPEMAAYAGYSFRELL-LWMVEDA  296 (300)
Q Consensus       223 ~~~~i~~~a~~~~~alg~~g~~rvDf~~d~~~g~~~~lEvN~~PGlt~~s~~p~~~~~~G~s~~~li-~~ii~~A  296 (300)
T Consensus       227 --~e~~~la~~a~~~lgl-~~~GVDii~~~-~g-~~v~EVN~~Pg~~------gi~~~tgvdiA~~Ii~~ie~~~  290 (300)
T PRK10446        227 --PQEREIAIKAARTMAL-DVAGVDILRAN-RG-PLVMEVNASPGLE------GIEKTTGIDIAGKMIRWIERHA  290 (300)
T ss_pred             --HHHHHHHHHHHHHHCC-CEEEEEEEEEC-CC-CEEEEECCCHHHH------HHHHHHCCCHHHHHHHHHHHHC
T ss_conf             --9999999999998699-68999998828-99-8899993874278------8988759898999999999767