HHsearch alignment for GI: 254781179 and conserved domain: PRK10446
>PRK10446 ribosomal protein S6 modification protein; Provisional.
Probab=99.96 E-value=3.2e-27 Score=194.64 Aligned_cols=269 Identities=18% Similarity=0.243 Sum_probs=192.5
Q ss_pred CEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH-----------HHCCCCEEEECCCCCCCC-CCHH
Q ss_conf 2898367871278899999999999998798899961586568888-----------753998999925488434-3102
Q gi|254781179|r 1 MAVLMGGISSEREVSLSSGKACASALEDAGFKVSQIDVDRSVGLVL-----------AHLKPDLAFNVLHGNFGE-DGLV 68 (300)
Q Consensus 1 i~vl~GG~s~E~~iSl~S~~~i~~aL~~~g~~v~~id~~~~~~~~l-----------~~~~~D~vf~~lhG~~gE-dg~i 68 (300)
T Consensus 3 i~iLs~~~------~~yst~RL~eaa~~rGh~v~vidp~~~~~~i~~~~~~v~~~g~~L~~~DavipR~g~~~t~~~~~v 76 (300)
T PRK10446 3 IAILSRDG------TLYSCKRLREAAIQRGHLVEILDPLSCYMNINPAASSIHYKGRKLPHFDAVIPRIGTAITFYGTAA 76 (300)
T ss_pred EEEEECCC------CCCHHHHHHHHHHHCCCEEEEEEHHHCEEEECCCCCEEEECCEECCCCCEEEECCCCCCCHHHHHH
T ss_conf 99993699------760799999999987995999614891898248986499898086878889982677745589999
Q ss_pred HHHHHHHHHHCCCCCHHHHHHCCCCHHCCCCCCCCEEECCCEEEECCCCCH--HHHHC-CCCEEEEECCCCCCCCEEEEC
Q ss_conf 356664321002310023320365001000021210000121320222000--12210-586256432477642114325
Q gi|254781179|r 69 QAILELLEIPYTHSGILASALSMDKMRSKQVVSSCGVPVCPSILVNRFTMD--SQHLI-SPPYVIKPLKGGSSLGIIVIK 145 (300)
Q Consensus 69 q~~le~~~ipy~Gs~~~~~~l~~dK~~~k~~l~~~gIptp~~~~~~~~~~~--~~~~~-~~P~ivKP~~ggsS~Gv~~v~ 145 (300)
T Consensus 77 Lr~lE~~Gv~vi-N~~~aI~~~~DKl~t~qlL~~~gip~P~T~~~~~~~~~~~~i~~~gg~PvViKpl~Gs~G~GV~l~e 155 (300)
T PRK10446 77 LRQFEMLGSYPL-NESVAIARARDKLRSMQLLARQGIDLPVTGIAHSPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAE 155 (300)
T ss_pred HHHHHHCCCCEE-CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEE
T ss_conf 999998899186-4899999857699999999875979998898369999999999808997899967898860369973
Q ss_pred CHHHHHHHHHHHCCCCCCCCCCCCCCC---CCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 989999988630036688542233357---88457887314444200220255433331100001122224586521166
Q gi|254781179|r 146 KDQSIPLDLLQSSSWNHGDQLLIEQYV---DGIELTCGVMGDASLDVTEIAVPKSDFYSYELKYSSLNSTHVLPAKIPLD 222 (300)
Q Consensus 146 ~~~el~~~~~~~~~~~~~~~vlVEefI---~G~E~~v~Vl~~~~~~~~ei~~~~~~~~dy~~Ky~~~~~~~~~Pa~l~~~ 222 (300)
T Consensus 156 ~~~~~~~i~~~~~--~~~~~~~iQeyI~~~~g~D~Rv~vvgg~vvaam~R~~~~g~~---rtN~~~Gg~~~--~~~l~-- 226 (300)
T PRK10446 156 TRQAAESVIDAFR--GLNAHILVQEYIKEAQGCDIRCLVVGDEVVAAIERRAKEGDF---RSNLHRGGAAS--VASIT-- 226 (300)
T ss_pred CHHHHHHHHHHHH--HCCCCEEEEEECCCCCCCCEEEEEECCEEHHHEEEECCCCCE---EEEEECCCEEE--ECCCC--
T ss_conf 7899999999886--228737752202555798679999998624438997378834---77770397765--32899--
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHH-HHHHHHH
Q ss_conf 6554444444577534876457999999768983999974726588822389999998399989999-9999975
Q gi|254781179|r 223 IYKEVQRLAFLAHQAIGCRGISRSDFLFDPLSRKVFWLEINVQPGMTPVSIFPEMAAYAGYSFRELL-LWMVEDA 296 (300)
Q Consensus 223 ~~~~i~~~a~~~~~alg~~g~~rvDf~~d~~~g~~~~lEvN~~PGlt~~s~~p~~~~~~G~s~~~li-~~ii~~A 296 (300)
T Consensus 227 --~e~~~la~~a~~~lgl-~~~GVDii~~~-~g-~~v~EVN~~Pg~~------gi~~~tgvdiA~~Ii~~ie~~~ 290 (300)
T PRK10446 227 --PQEREIAIKAARTMAL-DVAGVDILRAN-RG-PLVMEVNASPGLE------GIEKTTGIDIAGKMIRWIERHA 290 (300)
T ss_pred --HHHHHHHHHHHHHHCC-CEEEEEEEEEC-CC-CEEEEECCCHHHH------HHHHHHCCCHHHHHHHHHHHHC
T ss_conf --9999999999998699-68999998828-99-8899993874278------8988759898999999999767