HHsearch alignment for GI: 254781179 and conserved domain: PRK12767
>PRK12767 carbamoyl phosphate synthase-like protein; Provisional.
Probab=100.00 E-value=1.2e-30 Score=216.58 Aligned_cols=248 Identities=18% Similarity=0.237 Sum_probs=177.2
Q ss_pred HHHHHHHHHHCC--CEEEEECCCC------------------------CHHHHHHHCCCCEEEECCCCCCCCCCHH---H
Q ss_conf 999999999879--8899961586------------------------5688887539989999254884343102---3
Q gi|254781179|r 19 GKACASALEDAG--FKVSQIDVDR------------------------SVGLVLAHLKPDLAFNVLHGNFGEDGLV---Q 69 (300)
Q Consensus 19 ~~~i~~aL~~~g--~~v~~id~~~------------------------~~~~~l~~~~~D~vf~~lhG~~gEdg~i---q 69 (300)
T Consensus 12 ~~~ii~~lk~~~~~~~Vi~~D~~~~a~~~~~aD~~y~~P~~~d~~y~~~ll~i~~~~~id~iiP~~d---~El~~la~~~ 88 (325)
T PRK12767 12 RVQLVKALKKSLLGGKVIGADISPLAPALYFADKFYVVPKVTDPNYIDALLDICKKENIDALIPLID---PELPLLAQHR 88 (325)
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCC---HHHHHHHHHH
T ss_conf 8999999997699859999689989953445488998788898789999999999879999997785---0266899999
Q ss_pred HHHHHHHHHCCCCCHHHHHHCCCCHHCCCCCCCCEEECCCEEEECCCCCH---HHHHCCCCEEEEECCCCCCCCEEEECC
Q ss_conf 56664321002310023320365001000021210000121320222000---122105862564324776421143259
Q gi|254781179|r 70 AILELLEIPYTHSGILASALSMDKMRSKQVVSSCGVPVCPSILVNRFTMD---SQHLISPPYVIKPLKGGSSLGIIVIKK 146 (300)
Q Consensus 70 ~~le~~~ipy~Gs~~~~~~l~~dK~~~k~~l~~~gIptp~~~~~~~~~~~---~~~~~~~P~ivKP~~ggsS~Gv~~v~~ 146 (300)
T Consensus 89 ~~l~~~gi~v~~~~~e~i~~~~DK~~~~~~l~~~gip~P~t~~~~~~~~~~~~~~~~~~fP~vvKP~~g~gs~Gv~~i~~ 168 (325)
T PRK12767 89 DEFKEIGVKVLVSSKEVIEICNDKWLTYEFLKENGINTPKSYLPEDLEDLLKALAEELGFPLIVKPRDGSGSIGVFKVNN 168 (325)
T ss_pred HHHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECC
T ss_conf 99996799895697999998549999999999759998982055899999999986569966985356788775499799
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 89999988630036688542233357884578873144442002202554333311000011222245865211666554
Q gi|254781179|r 147 DQSIPLDLLQSSSWNHGDQLLIEQYVDGIELTCGVMGDASLDVTEIAVPKSDFYSYELKYSSLNSTHVLPAKIPLDIYKE 226 (300)
Q Consensus 147 ~~el~~~~~~~~~~~~~~~vlVEefI~G~E~~v~Vl~~~~~~~~ei~~~~~~~~dy~~Ky~~~~~~~~~Pa~l~~~~~~~ 226 (300)
T Consensus 169 ~~el~~~~~~------~~~~ivqe~i~G~E~tvdv~~d~~g~~~~~~~-~~r~-----~~~~G~~~---~~~~--~~~~~ 231 (325)
T PRK12767 169 REELEFLLRY------NPNLIIQEFIEGQEYTVDVLCDLNGEVISIVP-RKRI-----EVRAGETS---KGVT--VKNPE 231 (325)
T ss_pred HHHHHHHHHH------CCCEEEEECCCCCEEEEEEEEECCCCEEEEEE-EEEC-----CCCCCCCC---CCEE--CCHHH
T ss_conf 9999999974------89749870348988999999978999999999-8733-----64457867---7530--57999
Q ss_pred HHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 4444445775348764579999997689839999747265888223899999983999899999999
Q gi|254781179|r 227 VQRLAFLAHQAIGCRGISRSDFLFDPLSRKVFWLEINVQPGMTPVSIFPEMAAYAGYSFRELLLWMV 293 (300)
Q Consensus 227 i~~~a~~~~~alg~~g~~rvDf~~d~~~g~~~~lEvN~~PGlt~~s~~p~~~~~~G~s~~~li~~ii 293 (300)
T Consensus 232 l~~~~~~i~~~l~~~G~~~vq~~~~--~g~~~iiEiNPRf~----g~~~-l~~~aG~n~p~~~~~~~ 291 (325)
T PRK12767 232 LFKLAERIAEKLGARGPLNIQCFVV--DGEPYLFEINPRFG----GGYP-LRAMAGFNEPDILIRNL 291 (325)
T ss_pred HHHHHHHHHHHCCCCCEEEEEEEEE--CCEEEEEEEECCCC----CCHH-HHHHHCCCHHHHHHHHH
T ss_conf 9999999999819854599999998--99699999978878----6467-39883989999999998