HHsearch alignment for GI: 254781179 and conserved domain: PRK12815
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed.
Probab=100.00 E-value=9.6e-34 Score=236.45 Aligned_cols=270 Identities=21% Similarity=0.274 Sum_probs=215.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCC---------------------CCHHHHHHHCCCCEEEECCCCCCCCC
Q ss_conf 787127889999999999999879889996158---------------------65688887539989999254884343
Q gi|254781179|r 7 GISSEREVSLSSGKACASALEDAGFKVSQIDVD---------------------RSVGLVLAHLKPDLAFNVLHGNFGED 65 (300)
Q Consensus 7 G~s~E~~iSl~S~~~i~~aL~~~g~~v~~id~~---------------------~~~~~~l~~~~~D~vf~~lhG~~gEd 65 (300)
T Consensus 21 Gqa~EfD---ysg~qA~~aLkeeG~~vvlvN~NPaTi~TD~~~ad~vY~ePlt~e~v~~Ii~~E~Pd~il~~~GGqtaLn 97 (1068)
T PRK12815 21 GQAAEFD---YSGTQACKALKEEGYQVVLVNPNPATIMTDPEPADTVYFEPLTLEFVKRIIRREKPDALLATLGGQTALN 97 (1068)
T ss_pred CCHHHHH---HHHHHHHHHHHHCCCEEEEECCCCCHHHCCCCCCCEEEECCCCHHHHHHHHHHHCCCEEEECCCCHHHHH
T ss_conf 2344656---5699999999986998999889832620898744437885898999999999749998986777847999
Q ss_pred CHH----HHHHHHHHHHCCCCCHHHHHHCCCCHHCCCCCCCCEEECCCEEEECCCCC--HHHHHCCCCEEEEECCCCCCC
Q ss_conf 102----35666432100231002332036500100002121000012132022200--012210586256432477642
Q gi|254781179|r 66 GLV----QAILELLEIPYTHSGILASALSMDKMRSKQVVSSCGVPVCPSILVNRFTM--DSQHLISPPYVIKPLKGGSSL 139 (300)
Q Consensus 66 g~i----q~~le~~~ipy~Gs~~~~~~l~~dK~~~k~~l~~~gIptp~~~~~~~~~~--~~~~~~~~P~ivKP~~ggsS~ 139 (300)
T Consensus 98 la~~L~~~GiL~k~~v~llGt~~~~I~~aedR~~f~~~m~~ig~~~~~s~~~~s~~ea~~~a~~ig~PvivRps~~lGg~ 177 (1068)
T PRK12815 98 LAVKLLEAGILEQYGVELLGTNVEAIQKGEDRERFRALMKELGEPVPESEIVDSEEEALRFAEKIGFPIIVRPAYTLGGD 177 (1068)
T ss_pred HHHHHHHCCCHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf 99999975977865964967999999864599999999997699999705219999999999866998999836106689
Q ss_pred CEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCC-CEEEEEECCCCCCCE-----EEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 11432598999998863003668854223335788-457887314444200-----220255433331100001122224
Q gi|254781179|r 140 GIIVIKKDQSIPLDLLQSSSWNHGDQLLIEQYVDG-IELTCGVMGDASLDV-----TEIAVPKSDFYSYELKYSSLNSTH 213 (300)
Q Consensus 140 Gv~~v~~~~el~~~~~~~~~~~~~~~vlVEefI~G-~E~~v~Vl~~~~~~~-----~ei~~~~~~~~dy~~Ky~~~~~~~ 213 (300)
T Consensus 178 g~~i~~n~~eL~~~~~~~~~~S~~~~vlie~sl~gwkEie~ev~RD~~~n~i~vc~mEnidP~-G-------IHTGDSi~ 249 (1068)
T PRK12815 178 GGGIAENEEELEQLARQGLQASPIHQCLLEESIAGWKEIEYEVMRDRNDNCVTVCNMENIDPV-G-------VHTGDSIV 249 (1068)
T ss_pred CCEEECCHHHHHHHHHHHHHHCCCCCEEEEHHCCCCEEEEEEEEEECCCCEEEEEECCCCCCC-C-------CCCCCCCE
T ss_conf 650445999999999999963999857865011797699999999889897998541235445-4-------35677453
Q ss_pred CCCCC-CHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 58652-1166655444444457753487645799999976898399997472658882238999999839998999999
Q gi|254781179|r 214 VLPAK-IPLDIYKEVQRLAFLAHQAIGCRGISRSDFLFDPLSRKVFWLEINVQPGMTPVSIFPEMAAYAGYSFRELLLW 291 (300)
Q Consensus 214 ~~Pa~-l~~~~~~~i~~~a~~~~~alg~~g~~rvDf~~d~~~g~~~~lEvN~~PGlt~~s~~p~~~~~~G~s~~~li~~ 291 (300)
T Consensus 250 vaP~qTL~d~e~q~lR~~a~~I~~~lgv~G~~NiQFAv~p~~~~~~VIEvNPR--~SRssa--laSKATGyPiAkvaak 324 (1068)
T PRK12815 250 VAPSQTLTDDEYQMLRSASLKIIRALGVVGGCNIQFALDPRSKQYYVIEVNPR--VSRSSA--LASKATGYPIAKIAAK 324 (1068)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHHHCCEECCEEEEEEECCCCCCEEEEECCCC--CCCHHH--HHHHHCCCCHHHHHHH
T ss_conf 45781269999999999999999972801010579988699982899964786--220247--8887508848999999