HHsearch alignment for GI: 254781179 and conserved domain: TIGR02712
>TIGR02712 urea_carbox urea carboxylase; InterPro: IPR014084 Members of this family are ATP-dependent urea carboxylases, including characterised members from Oleomonas sagaranensis (alpha class Proteobacterium) and yeasts such as Saccharomyces cerevisiae (Baker's yeast). The allophanate hydrolase domain of the yeast enzyme is not included in this entry and is represented by an adjacent gene in Oleomonas sagaranensis. The fusion of urea carboxylase and allophanate hydrolase is designated urea amidolyase. The enzyme from O. sagaranensis was shown to be highly active on acetamide and formamide as well as urea..
Probab=100.00 E-value=4.2e-33 Score=232.34 Aligned_cols=263 Identities=17% Similarity=0.282 Sum_probs=203.4
Q ss_pred HHHHHHHHHHCCCEEEEECCC--CCHHHHH---------------------------HHCCCCEEEECCCCCCCCCCHHH
Q ss_conf 999999999879889996158--6568888---------------------------75399899992548843431023
Q gi|254781179|r 19 GKACASALEDAGFKVSQIDVD--RSVGLVL---------------------------AHLKPDLAFNVLHGNFGEDGLVQ 69 (300)
Q Consensus 19 ~~~i~~aL~~~g~~v~~id~~--~~~~~~l---------------------------~~~~~D~vf~~lhG~~gEdg~iq 69 (300)
T Consensus 13 A~RiirTL~~lgi~sVAvYS~aD~~s~HV~~AD~A~~Lg~~~A~esYL~~dkil~~Ak~tGA~AI~P-GYGFLSENA~FA 91 (1226)
T TIGR02712 13 AVRIIRTLRKLGIRSVAVYSDADRASQHVLDADEAVCLGGATAAESYLDIDKILAIAKKTGAQAIHP-GYGFLSENAAFA 91 (1226)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCHHHCCCEECCCCCCHHHHHCCHHHHHHHHHHCCCCEEEC-CCCCCCCCHHHH
T ss_conf 9999999877186379863210021578236050260589541322214789999997558938745-887235787799
Q ss_pred HHHHHHHHHCCCCCHHHHHHCCCCHHCCCCCCCCEEECCCE-EEECCCC--CHHHHHCCCCEEEEECCCCCCCCEEEECC
Q ss_conf 56664321002310023320365001000021210000121-3202220--00122105862564324776421143259
Q gi|254781179|r 70 AILELLEIPYTHSGILASALSMDKMRSKQVVSSCGVPVCPS-ILVNRFT--MDSQHLISPPYVIKPLKGGSSLGIIVIKK 146 (300)
Q Consensus 70 ~~le~~~ipy~Gs~~~~~~l~~dK~~~k~~l~~~gIptp~~-~~~~~~~--~~~~~~~~~P~ivKP~~ggsS~Gv~~v~~ 146 (300)
T Consensus 92 ~~C~~aGI~FvGPtpe~ir~fGLKHtAR~lA~~aGVPL~PGTgLL~sl~eA~~~A~~IGYPVMlKSTAGGGGIGl~~c~~ 171 (1226)
T TIGR02712 92 EACEAAGIVFVGPTPEQIRKFGLKHTARELAEAAGVPLLPGTGLLESLDEALEAAKEIGYPVMLKSTAGGGGIGLQKCDN 171 (1226)
T ss_pred HHHHHCCCEEECCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC
T ss_conf 89984795787787066744383256899999668898885155877999999986469954798707876524511189
Q ss_pred HHHHHHHHHHH----CCCCCCCCCCCCCCCC-CCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC-CH
Q ss_conf 89999988630----0366885422333578-845788731444420022025543333110000112222458652-11
Q gi|254781179|r 147 DQSIPLDLLQS----SSWNHGDQLLIEQYVD-GIELTCGVMGDASLDVTEIAVPKSDFYSYELKYSSLNSTHVLPAK-IP 220 (300)
Q Consensus 147 ~~el~~~~~~~----~~~~~~~~vlVEefI~-G~E~~v~Vl~~~~~~~~ei~~~~~~~~dy~~Ky~~~~~~~~~Pa~-l~ 220 (300)
T Consensus 172 ~~eL~~aFe~Vkrlg~~~F~daGVFlErfv~~ARHvEVQifGDG~G~v~aLGeRDCSL---QR--RNQKVvEETPAP~LP 246 (1226)
T TIGR02712 172 AAELAEAFETVKRLGESFFGDAGVFLERFVENARHVEVQIFGDGKGKVVALGERDCSL---QR--RNQKVVEETPAPNLP 246 (1226)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCC---CC--CCCCEEEECCCCCCC
T ss_conf 8999999999899886323635143403203784289987526973369971167544---44--566558727746864
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCC----CCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 6665544444445775348764579999997689839999747265----888223899999983999899999999975
Q gi|254781179|r 221 LDIYKEVQRLAFLAHQAIGCRGISRSDFLFDPLSRKVFWLEINVQP----GMTPVSIFPEMAAYAGYSFRELLLWMVEDA 296 (300)
Q Consensus 221 ~~~~~~i~~~a~~~~~alg~~g~~rvDf~~d~~~g~~~~lEvN~~P----Glt~~s~~p~~~~~~G~s~~~li~~ii~~A 296 (300)
T Consensus 247 ~~~R~~L~~AA~~Lg~~V~YrSAGTVEFiYD~~~d~FYFLEVNTRLQVEHPvTE~--------VtGl---DLVEWM~r~A 315 (1226)
T TIGR02712 247 EETRAALLAAAEKLGEAVNYRSAGTVEFIYDEARDEFYFLEVNTRLQVEHPVTEM--------VTGL---DLVEWMVRIA 315 (1226)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEE--------EECC---HHHHHHHHHH
T ss_conf 8999999999999999718763760477402210871211323411133573017--------8464---0898999971
Q ss_pred HC
Q ss_conf 11
Q gi|254781179|r 297 SC 298 (300)
Q Consensus 297 ~~ 298 (300)
T Consensus 316 Ag 317 (1226)
T TIGR02712 316 AG 317 (1226)
T ss_pred CC
T ss_conf 68