HHsearch alignment for GI: 254781179 and conserved domain: TIGR02712

>TIGR02712 urea_carbox urea carboxylase; InterPro: IPR014084 Members of this family are ATP-dependent urea carboxylases, including characterised members from Oleomonas sagaranensis (alpha class Proteobacterium) and yeasts such as Saccharomyces cerevisiae (Baker's yeast). The allophanate hydrolase domain of the yeast enzyme is not included in this entry and is represented by an adjacent gene in Oleomonas sagaranensis. The fusion of urea carboxylase and allophanate hydrolase is designated urea amidolyase. The enzyme from O. sagaranensis was shown to be highly active on acetamide and formamide as well as urea..
Probab=100.00  E-value=4.2e-33  Score=232.34  Aligned_cols=263  Identities=17%  Similarity=0.282  Sum_probs=203.4

Q ss_pred             HHHHHHHHHHCCCEEEEECCC--CCHHHHH---------------------------HHCCCCEEEECCCCCCCCCCHHH
Q ss_conf             999999999879889996158--6568888---------------------------75399899992548843431023
Q gi|254781179|r   19 GKACASALEDAGFKVSQIDVD--RSVGLVL---------------------------AHLKPDLAFNVLHGNFGEDGLVQ   69 (300)
Q Consensus        19 ~~~i~~aL~~~g~~v~~id~~--~~~~~~l---------------------------~~~~~D~vf~~lhG~~gEdg~iq   69 (300)
T Consensus        13 A~RiirTL~~lgi~sVAvYS~aD~~s~HV~~AD~A~~Lg~~~A~esYL~~dkil~~Ak~tGA~AI~P-GYGFLSENA~FA   91 (1226)
T TIGR02712        13 AVRIIRTLRKLGIRSVAVYSDADRASQHVLDADEAVCLGGATAAESYLDIDKILAIAKKTGAQAIHP-GYGFLSENAAFA   91 (1226)
T ss_pred             HHHHHHHHHHCCCCEEEEECCCCCCCCCHHHCCCEECCCCCCHHHHHCCHHHHHHHHHHCCCCEEEC-CCCCCCCCHHHH
T ss_conf             9999999877186379863210021578236050260589541322214789999997558938745-887235787799


Q ss_pred             HHHHHHHHHCCCCCHHHHHHCCCCHHCCCCCCCCEEECCCE-EEECCCC--CHHHHHCCCCEEEEECCCCCCCCEEEECC
Q ss_conf             56664321002310023320365001000021210000121-3202220--00122105862564324776421143259
Q gi|254781179|r   70 AILELLEIPYTHSGILASALSMDKMRSKQVVSSCGVPVCPS-ILVNRFT--MDSQHLISPPYVIKPLKGGSSLGIIVIKK  146 (300)
Q Consensus        70 ~~le~~~ipy~Gs~~~~~~l~~dK~~~k~~l~~~gIptp~~-~~~~~~~--~~~~~~~~~P~ivKP~~ggsS~Gv~~v~~  146 (300)
T Consensus        92 ~~C~~aGI~FvGPtpe~ir~fGLKHtAR~lA~~aGVPL~PGTgLL~sl~eA~~~A~~IGYPVMlKSTAGGGGIGl~~c~~  171 (1226)
T TIGR02712        92 EACEAAGIVFVGPTPEQIRKFGLKHTARELAEAAGVPLLPGTGLLESLDEALEAAKEIGYPVMLKSTAGGGGIGLQKCDN  171 (1226)
T ss_pred             HHHHHCCCEEECCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC
T ss_conf             89984795787787066744383256899999668898885155877999999986469954798707876524511189


Q ss_pred             HHHHHHHHHHH----CCCCCCCCCCCCCCCC-CCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC-CH
Q ss_conf             89999988630----0366885422333578-845788731444420022025543333110000112222458652-11
Q gi|254781179|r  147 DQSIPLDLLQS----SSWNHGDQLLIEQYVD-GIELTCGVMGDASLDVTEIAVPKSDFYSYELKYSSLNSTHVLPAK-IP  220 (300)
Q Consensus       147 ~~el~~~~~~~----~~~~~~~~vlVEefI~-G~E~~v~Vl~~~~~~~~ei~~~~~~~~dy~~Ky~~~~~~~~~Pa~-l~  220 (300)
T Consensus       172 ~~eL~~aFe~Vkrlg~~~F~daGVFlErfv~~ARHvEVQifGDG~G~v~aLGeRDCSL---QR--RNQKVvEETPAP~LP  246 (1226)
T TIGR02712       172 AAELAEAFETVKRLGESFFGDAGVFLERFVENARHVEVQIFGDGKGKVVALGERDCSL---QR--RNQKVVEETPAPNLP  246 (1226)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCC---CC--CCCCEEEECCCCCCC
T ss_conf             8999999999899886323635143403203784289987526973369971167544---44--566558727746864


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCC----CCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf             6665544444445775348764579999997689839999747265----888223899999983999899999999975
Q gi|254781179|r  221 LDIYKEVQRLAFLAHQAIGCRGISRSDFLFDPLSRKVFWLEINVQP----GMTPVSIFPEMAAYAGYSFRELLLWMVEDA  296 (300)
Q Consensus       221 ~~~~~~i~~~a~~~~~alg~~g~~rvDf~~d~~~g~~~~lEvN~~P----Glt~~s~~p~~~~~~G~s~~~li~~ii~~A  296 (300)
T Consensus       247 ~~~R~~L~~AA~~Lg~~V~YrSAGTVEFiYD~~~d~FYFLEVNTRLQVEHPvTE~--------VtGl---DLVEWM~r~A  315 (1226)
T TIGR02712       247 EETRAALLAAAEKLGEAVNYRSAGTVEFIYDEARDEFYFLEVNTRLQVEHPVTEM--------VTGL---DLVEWMVRIA  315 (1226)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEE--------EECC---HHHHHHHHHH
T ss_conf             8999999999999999718763760477402210871211323411133573017--------8464---0898999971


Q ss_pred             HC
Q ss_conf             11
Q gi|254781179|r  297 SC  298 (300)
Q Consensus       297 ~~  298 (300)
T Consensus       316 Ag  317 (1226)
T TIGR02712       316 AG  317 (1226)
T ss_pred             CC
T ss_conf             68