BLAST/PSIBLAST alignment of GI: 254781179 and GI: 222086439 at iteration 1
>gi|222086439|ref|YP_002544973.1| D-alanine-D-alanine ligase protein [Agrobacterium radiobacter K84] Length = 308
>gi|221723887|gb|ACM27043.1| D-alanine-D-alanine ligase protein [Agrobacterium radiobacter K84] Length = 308
 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 171/303 (56%), Positives = 231/303 (76%), Gaps = 3/303 (0%)

Query: 1   MAVLMGGISSEREVSLSSGKACASALEDAGFKVSQIDVDRSVGLVLAHLKPDLAFNVLHG 60
           +AVL+GG SSER VSLSSGKACA ALE  G++V+++DV+R V   LA LKPD+ FN LHG
Sbjct: 6   VAVLLGGFSSERPVSLSSGKACADALEAEGYRVTRVDVERDVSARLADLKPDVVFNALHG 65

Query: 61  NFGEDGLVQAILELLEIPYTHSGILASALSMDKMRSKQVVSSCGVPVCPSILVNRFTMDS 120
            FGEDG +Q +LE L+IPYTHSG++ASAL+MDK R+K V +S G+PV  S+++NRF +  
Sbjct: 66  PFGEDGTIQGVLEYLQIPYTHSGVMASALAMDKARAKTVAASAGIPVAASLVLNRFDIAG 125

Query: 121 QHLISPPYVIKPLKGGSSLGIIVIKKDQSIPLDLLQSSSWNHGDQLLIEQYVDGIELTCG 180
           +H +  PYV+KP++ GSS G++++K++Q+ P  ++ SS W +GD++++E+Y+ G ELTCG
Sbjct: 126 EHPMPAPYVVKPVREGSSFGVVIVKEEQAHPPQIIASSEWRYGDEVMVERYIHGRELTCG 185

Query: 181 VMGDASLDVTEIAVPKSDFYSYELKYSSLNSTHVLPAKIPLDIYKEVQRLAFLAHQAIGC 240
           VMGD +L VTEI      FY Y+ KY++  S HV+PA+I  ++Y+++Q LA  AHQAIGC
Sbjct: 186 VMGDTALGVTEIVPQGHSFYDYDSKYAAGGSKHVIPAEISPNLYQKIQLLALRAHQAIGC 245

Query: 241 RGISRSDFLFDPL---SRKVFWLEINVQPGMTPVSIFPEMAAYAGYSFRELLLWMVEDAS 297
           RG+SRSDF FD       ++ WLEIN QPGMTP S+ PEMAA+AGYSF E L WMVED+S
Sbjct: 246 RGVSRSDFRFDDRFSEEGELIWLEINTQPGMTPTSLLPEMAAHAGYSFGEFLRWMVEDSS 305

Query: 298 CLR 300
           C R
Sbjct: 306 CSR 308