PSIBLAST alignment of GI: 254781179 and protein with PDB id: 1e4e
>gi|14719503|pdb|1E4E|A Chain A, D-Alanyl-D-Lacate Ligase Length = 343
Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats.
Identities = 79/338 (23%), Positives = 138/338 (40%), Gaps = 45/338 (13%)
Query: 1 MAVLMGGISSEREVSLSSGKACASALEDAGFKVSQIDVDRSVGLVLAHLK---------- 50
+A+L GG S E +VS+ S A+ + ++ I + +S +
Sbjct: 6 VAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGITKSGVWKMCEKPCAEWENENCY 65
Query: 51 -------------------------PDLAFNVLHGNFGEDGLVQAILELLEIPYTHSGIL 85
D+AF+ LHG GEDG +Q + EL IP+ I
Sbjct: 66 SAVLSPDKKMHGLLVKKNHEYEINHVDVAFSALHGKSGEDGSIQGLFELSGIPFVGCDIQ 125
Query: 86 ASALSMDKMRSKQVVSSCGVPVCPSILVNRFTMDSQHLISPPYVIKPLKGGSSLGIIVIK 145
+SA+ MDK + V + G+ ++N+ + P +KP + GSS G+ +
Sbjct: 126 SSAICMDKSLTYIVAKNAGIATPAFWVINKDDRPVAATFTYPVFVKPARSGSSFGVKKVN 185
Query: 146 KDQSIPLDLLQSSSWNHGDQLLIEQYVDGIELTCGVMGDASLDVTEIAVPKSDFYSYELK 205
+ + + + ++LIEQ V G E+ C V+G+++ V Y
Sbjct: 186 SADELDYAIESARQ--YDSKILIEQAVSGCEVGCAVLGNSAALVVGEVDQIRLQYGIFRI 243
Query: 206 YSSLNST-------HVLPAKIPLDIYKEVQRLAFLAHQAIGCRGISRSDFLFDPLSRKVF 258
+ + +PA + + +Q ++ +GCRG++R D + ++
Sbjct: 244 HQEVEPEKGSENAVITVPADLSAEERGRIQETVKKIYKTLGCRGLARVDMFL-QDNGRIV 302
Query: 259 WLEINVQPGMTPVSIFPEMAAYAGYSFRELLLWMVEDA 296
E+N PG T S +P M A AG S EL+ ++ A
Sbjct: 303 LNEVNTLPGFTSYSRYPRMMAAAGISLPELIDRLIVLA 340