RPSBLAST alignment of GI: 254781179 and protein with PDBid: 1e4e
>1e4e_A Vancomycin/teicoplanin A-type resistance protein VANA; ligase, cell WALL, antibiotic resistance, membrane, plasmid; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B* Length = 343
Score = 221 bits (563), Expect = 2e-58
Identities = 85/337 (25%), Positives = 143/337 (42%), Gaps = 45/337 (13%)
Query: 2 AVLMGGISSEREVSLSSGKACASALEDAGFKVSQIDVDR--------------------- 40
A+L GG S E +VS+ S A+ + ++ I + +
Sbjct: 7 AILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGITKSGVWKMCEKPCAEWENENCYS 66
Query: 41 --------------SVGLVLAHLKPDLAFNVLHGNFGEDGLVQAILELLEIPYTHSGILA 86
D+AF+ LHG GEDG +Q + EL IP+ I +
Sbjct: 67 AVLSPDKKMHGLLVKKNHEYEINHVDVAFSALHGKSGEDGSIQGLFELSGIPFVGCDIQS 126
Query: 87 SALSMDKMRSKQVVSSCGVPVCPSILVNRFTMDSQHLISPPYVIKPLKGGSSLGIIVIKK 146
SA+ MDK + V + G+ ++N+ + P +KP + GSS G+ +
Sbjct: 127 SAICMDKSLTYIVAKNAGIATPAFWVINKDDRPVAATFTYPVFVKPARSGSSFGVKKVNS 186
Query: 147 DQSIPLDLLQSSSWNHGDQLLIEQYVDGIELTCGVMGDAS----LDVTEIAVPKSDF--- 199
LD S+ + ++LIEQ V G E+ C V+G+++ +V +I + F
Sbjct: 187 ADE--LDYAIESARQYDSKILIEQAVSGCEVGCAVLGNSAALVVGEVDQIRLQYGIFRIH 244
Query: 200 YSYELKYSSLNSTHVLPAKIPLDIYKEVQRLAFLAHQAIGCRGISRSDFLFDPLSRKVFW 259
E + S N+ +PA + + +Q ++ +GCRG++R D + ++
Sbjct: 245 QEVEPEKGSENAVITVPADLSAEERGRIQETVKKIYKTLGCRGLARVDMFLQD-NGRIVL 303
Query: 260 LEINVQPGMTPVSIFPEMAAYAGYSFRELLLWMVEDA 296
E+N PG T S +P M A AG S EL+ ++ A
Sbjct: 304 NEVNTLPGFTSYSRYPRMMAAAGISLPELIDRLIVLA 340